BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15737
(444 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1PCA|A Chain A, Three Dimensional Structure Of Porcine Pancreatic
Procarboxypeptidase A. A Comparison Of The A And B
Zymogens And Their Determinants For Inhibition And
Activation
Length = 403
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 172/314 (54%), Gaps = 27/314 (8%)
Query: 135 IDIMVKADKVAAVKQYLEKAKLTYEVILEDVQRAXXXXXXXXXXXXLAVLTGRKGHRMTF 194
ID+ V + AVK +LE + Y +++EDVQ + GR TF
Sbjct: 48 IDVRVPFPSIQAVKVFLEAHGIRYTIMIEDVQ-----LLLDEEQEQMFASQGRARTTSTF 102
Query: 195 H--KYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAKAFWIDGG 252
+ YH +E+I+ ++D L +P LV+ IGRS EGRP+ ++K S+G N A WID G
Sbjct: 103 NYATYHTLEEIYDFMDILVAEHPALVSKLQIGRSYEGRPIYVLKFSTGGSNRPAIWIDSG 162
Query: 253 IHAREWITPATVSFILSELVENREAQEDY---IKKIDFYVLPITNPDGYEYTHTTERLWR 309
IH+REWIT A+ + ++ EN + + +D ++ +TNP+G+ +TH+ RLWR
Sbjct: 163 IHSREWITQASGVWFAKKITENYGQNSSFTAILDSMDIFLEIVTNPNGFAFTHSDNRLWR 222
Query: 310 KNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPF 369
K R K+ G C G D NRNW +GG G+S C + Y G P
Sbjct: 223 KTRSKA-SGSLCVG---------------SDSNRNWDAGFGGAGASSSPCAETYHGKYPN 266
Query: 370 SEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEAM 429
SE E ++++ F+ NN N+KAF++ HSY Q +LYP+GY + P D ++L+++ ++A A+
Sbjct: 267 SEVEVKSITDFV-KNNGNIKAFISIHSYSQLLLYPYGYKTQSPADKSELNQIAKSAVAAL 325
Query: 430 RVAGGGAYTFVLMI 443
+ G +Y + +I
Sbjct: 326 KSLYGTSYKYGSII 339
>pdb|2BOA|A Chain A, Human Procarboxypeptidase A4.
pdb|2BOA|B Chain B, Human Procarboxypeptidase A4
Length = 404
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 158/307 (51%), Gaps = 24/307 (7%)
Query: 135 IDIMVKADKVAAVKQYLEKAKLTYEVILEDVQRAXXXXXXXXXXXXLAVLTGRKGHRMTF 194
+D++V + + A K +L L Y V +ED+Q R + +
Sbjct: 47 VDVLVPSVSLQAFKSFLRSQGLEYAVTIEDLQALLDNEDDEMQHNEG---QERSSNNFNY 103
Query: 195 HKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAK-AFWIDGGI 253
YH +E I+ +D +A +P L IG S E RP+ ++K S+G + A W++ GI
Sbjct: 104 GAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAVWLNAGI 163
Query: 254 HAREWITPATVSFILSELVENRE---AQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRK 310
H+REWI+ AT + ++V + + A ++K+D ++LP+ NPDGY YT T RLWRK
Sbjct: 164 HSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRK 223
Query: 311 NRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPFS 370
R ++P G SC G D NRNW + G G+S C ++Y G S
Sbjct: 224 TRSRNP-GSSCIGADP---------------NRNWNASFAGKGASDNPCSEVYHGPHANS 267
Query: 371 EPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEAMR 430
E E ++V FI + N K F+ HSY Q ++YP+GY+ K PD +LD+V R AA+A+
Sbjct: 268 EVEVKSVVDFI-QKHGNFKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVARLAAKALA 326
Query: 431 VAGGGAY 437
G Y
Sbjct: 327 SVSGTEY 333
>pdb|3DGV|A Chain A, Crystal Structure Of Thrombin Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3DGV|B Chain B, Crystal Structure Of Thrombin Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3DGV|C Chain C, Crystal Structure Of Thrombin Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3OSL|A Chain A, Structure Of Bovine Thrombin-Activatable Fibrinolysis
Inhibitor In Complex With Tick Carboxypeptidase
Inhibitor
pdb|3OSL|C Chain C, Structure Of Bovine Thrombin-Activatable Fibrinolysis
Inhibitor In Complex With Tick Carboxypeptidase
Inhibitor
Length = 401
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 159/300 (53%), Gaps = 28/300 (9%)
Query: 135 IDIMVKADKVAAVKQYLEKAKLTYEVILEDVQRAXXXXXXXXXXXXLAVLTGRKGHRMTF 194
+ V A V+ VK +L +++ + V++E+V+ + +
Sbjct: 46 VHFFVNASDVSNVKAHLNASRIPFRVLVENVEDLIRQQTSNDT-------ISPRASSSYY 98
Query: 195 HKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAK-AFWIDGGI 253
+YH + +I+ +++ + + YP +V IG S E PL ++K+S AK A WID GI
Sbjct: 99 EQYHSLNEIYSWIEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKEQRAKNAMWIDCGI 158
Query: 254 HAREWITPATVSFILSELVE---NREAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRK 310
HAREWI+PA + + + + + +K +DFY++P+ N DGY+YT +R+WRK
Sbjct: 159 HAREWISPAFCLWFVGSVTYYYGKEKMHTNLLKHMDFYIMPVVNVDGYDYTWKKDRMWRK 218
Query: 311 NRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGF-HWGGVGSSKEQCQQIYAGTGPF 369
NR K ++C G DL NRN+ HW G G+S C +IY GT P
Sbjct: 219 NRSLHEK-NACVGTDL---------------NRNFASKHWCGEGASSSSCSEIYCGTYPE 262
Query: 370 SEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEAM 429
SEPE +AV+ F+ N ++KA+++ HSY Q I++P+ Y++ D+ +L V R A AM
Sbjct: 263 SEPEVKAVADFLRRNIKHIKAYISMHSYSQKIVFPYSYSRSRSKDHEELSLVAREAVFAM 322
>pdb|2C1C|A Chain A, Structural Basis Of The Resistance Of An Insect
Carboxypeptidase To Plant Protease Inhibitors
pdb|2C1C|B Chain B, Structural Basis Of The Resistance Of An Insect
Carboxypeptidase To Plant Protease Inhibitors
Length = 312
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 137/244 (56%), Gaps = 21/244 (8%)
Query: 192 MTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV---PNAKAFW 248
+ + Y +E I YLDY+ + YP + T+ + S EGRP++ +KIS+ N +
Sbjct: 1 LPYDNYQELEVIDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKISTTNFEDENKPVIF 60
Query: 249 IDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYEYTHTTERLW 308
IDGGIHAREWI+P +V++ + +LVE+ + D ++K D+ +LP+ NPDGY+YT T ER W
Sbjct: 61 IDGGIHAREWISPPSVTWAIHKLVEDV-TENDLLEKFDWILLPVVNPDGYKYTFTNERFW 119
Query: 309 RKNR--RKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGT 366
RK R +P C G D NRN+ F W +G+S C IYAGT
Sbjct: 120 RKTRSTNNNPLSQICRGADG---------------NRNFDFVWNSIGTSNSPCSDIYAGT 164
Query: 367 GPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAA 426
FSE ET+ V + + A M ++T HS+G ILYPWG++ + + L VG A A
Sbjct: 165 SAFSEVETRVVRDILHEHLARMALYLTMHSFGSMILYPWGHDGSLSQNALGLHTVGVAMA 224
Query: 427 EAMR 430
++
Sbjct: 225 SVIQ 228
>pdb|3GLJ|A Chain A, A Polymorph Of Carboxypeptidase B Zymogen Structure
Length = 401
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 162/310 (52%), Gaps = 29/310 (9%)
Query: 133 SNIDIMVKADKVAAVKQYLEKAKLTYEVILEDVQRAXXXXXXXXXXXXLAVLTGRKGHRM 192
S +D VKA+ + AV+ +LE+ +L YEV++ +++ GH
Sbjct: 50 STVDFRVKAEDILAVEDFLEQNELQYEVLINNLRSVLEAQFDSRVRTT--------GH-- 99
Query: 193 TFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAKAFWIDGG 252
++ KY+ E I + + P L++ T IG + G + L+K+ PN A ++D G
Sbjct: 100 SYEKYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPGPNKPAIFMDCG 159
Query: 253 IHAREWITPATVSFILSELVEN---REAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWR 309
HAREWI+ A + + E V +++ K+DFYVLP+ N DGY YT T R+WR
Sbjct: 160 FHAREWISHAFCQWFVREAVLTYGYESHMTEFLNKLDFYVLPVLNIDGYIYTWTKNRMWR 219
Query: 310 KNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPF 369
K R + G +C G D NRN+ W G+S + C + Y G+
Sbjct: 220 KTRSTN-AGTTCIGTDP---------------NRNFDAGWCTTGASTDPCDETYCGSAAE 263
Query: 370 SEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEAM 429
SE ET+A++ FI N +++KA++T HSY Q ILYP+ Y+ K+P + A+L+ + +AA + +
Sbjct: 264 SEKETKALADFIRNNLSSIKAYLTIHSYSQMILYPYSYDYKLPENNAELNNLAKAAVKEL 323
Query: 430 RVAGGGAYTF 439
G YT+
Sbjct: 324 ATLYGTKYTY 333
>pdb|1NSA|A Chain A, Three-Dimensional Structure Of Porcine Procarboxypeptidase
B: A Structural Basis Of Its Inactivity
Length = 395
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 167/310 (53%), Gaps = 29/310 (9%)
Query: 133 SNIDIMVKADKVAAVKQYLEKAKLTYEVILEDVQRAXXXXXXXXXXXXLAVLTGRKGHRM 192
S +D VKA+ + AV+ +LE+ +L YEV++ +++ ++ GH
Sbjct: 44 STVDFRVKAEDILAVEDFLEQNELQYEVLINNLRSVLEAQ--------FDSVSRTTGH-- 93
Query: 193 TFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAKAFWIDGG 252
++ KY+ E I + + + P L++ + IG + +G + L+K+ N A ++D G
Sbjct: 94 SYEKYNNWETIEAWTEQVTSKNPDLISRSAIGTTFDGDNIYLLKVGKPGSNKPAIFMDCG 153
Query: 253 IHAREWITPATVSFILSELVENR--EAQ-EDYIKKIDFYVLPITNPDGYEYTHTTERLWR 309
HAREWI+ A + + + V EA +++ +DFYVLP+ N DGY YT T R+WR
Sbjct: 154 FHAREWISQAFCQWFVRDAVRTYGYEAHMTEFLDNLDFYVLPVLNIDGYIYTWTKNRMWR 213
Query: 310 KNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPF 369
K R + G SC+G D NRN+ W VG+S C + Y G+
Sbjct: 214 KTRSTN-AGSSCTGTDP---------------NRNFNAGWCTVGASVNPCNETYCGSAAE 257
Query: 370 SEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEAM 429
SE ET+A++ FI N +++KA++T HSY Q ILYP+ Y+ K+P + A+L+ + + A + +
Sbjct: 258 SEKETKALADFIRNNLSSIKAYLTIHSYSQMILYPYSYDYKLPENDAELNSLAKGAVKEL 317
Query: 430 RVAGGGAYTF 439
G +Y++
Sbjct: 318 ASLYGTSYSY 327
>pdb|1HDQ|A Chain A, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With D-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|2CTB|A Chain A, The High Resolution Crystal Structure Of The Complex
Between Carboxypeptidase A And L-Phenyl Lactate
pdb|2CTC|A Chain A, The High Resolution Crystal Structure Of The Complex
Between Carboxypeptidase A And L-Phenyl Lactate
Length = 307
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 144/261 (55%), Gaps = 20/261 (7%)
Query: 186 GRKGHRMTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAK 245
R + + YH +++I+ ++D L +PQLV+ IGRS EGRP+ ++K S+G N
Sbjct: 1 ARSTNTFNYATYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSNRP 60
Query: 246 AFWIDGGIHAREWITPATVSFILSELVENREAQEDY---IKKIDFYVLPITNPDGYEYTH 302
A WID GIH+REWIT AT + + E+ + + +D ++ +TNPDG+ +TH
Sbjct: 61 AIWIDLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTH 120
Query: 303 TTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQI 362
+ RLWRK R + C G +D NRNW +G G+S C +
Sbjct: 121 SQNRLWRKTRSVT-SSSLCVG---------------VDANRNWDAGFGKAGASSSPCSET 164
Query: 363 YAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVG 422
Y G SE E +++ F+ ++ N KAF++ HSY Q +LYP+GY + PD +L++V
Sbjct: 165 YHGKYANSEVEVKSIVDFV-KDHGNFKAFLSIHSYSQLLLYPYGYTTQSIPDKTELNQVA 223
Query: 423 RAAAEAMRVAGGGAYTFVLMI 443
++A EA++ G +Y + +I
Sbjct: 224 KSAVEALKSLYGTSYKYGSII 244
>pdb|3FX6|A Chain A, X-Ray Crystallographic Studies On The Complex Of
Carboxypeptidase A With The Inhibitor Using Alpha-Nitro
Ketone As The Zinc-Binding Group
pdb|3FX6|C Chain C, X-Ray Crystallographic Studies On The Complex Of
Carboxypeptidase A With The Inhibitor Using Alpha-Nitro
Ketone As The Zinc-Binding Group
pdb|3FX6|E Chain E, X-Ray Crystallographic Studies On The Complex Of
Carboxypeptidase A With The Inhibitor Using Alpha-Nitro
Ketone As The Zinc-Binding Group
pdb|3FVL|A Chain A, Crystallogic Studies On The Complex Of Carboxypeptidase A
With Inhibitors Using Alpha-Hydroxy Ketone As
Zinc-Binding Group
pdb|3FVL|C Chain C, Crystallogic Studies On The Complex Of Carboxypeptidase A
With Inhibitors Using Alpha-Hydroxy Ketone As
Zinc-Binding Group
pdb|3FVL|E Chain E, Crystallogic Studies On The Complex Of Carboxypeptidase A
With Inhibitors Using Alpha-Hydroxy Ketone As
Zinc-Binding Group
Length = 307
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 144/261 (55%), Gaps = 20/261 (7%)
Query: 186 GRKGHRMTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAK 245
R + + YH +++I+ ++D L +PQLV+ IGRS EGRP+ ++K S+G N
Sbjct: 1 ARSTNTFNYATYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSNRP 60
Query: 246 AFWIDGGIHAREWITPATVSFILSELVENREAQEDY---IKKIDFYVLPITNPDGYEYTH 302
A WID GIH+REWIT AT + + E+ + + +D ++ +TNPDG+ +TH
Sbjct: 61 AIWIDLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTH 120
Query: 303 TTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQI 362
+ RLWRK R + C G +D NRNW +G G+S C +
Sbjct: 121 SQNRLWRKTRSVT-SSSLCVG---------------VDANRNWDAGFGKAGASSSPCSET 164
Query: 363 YAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVG 422
Y G SE E +++ F+ ++ N KAF++ HSY Q +LYP+GY + PD +L++V
Sbjct: 165 YHGKYANSEVEVKSIVDFV-KDHGNFKAFLSIHSYSQLLLYPYGYTTQSIPDKTELNQVA 223
Query: 423 RAAAEAMRVAGGGAYTFVLMI 443
++A EA++ G +Y + +I
Sbjct: 224 KSAVEALKSLYGTSYKYGSII 244
>pdb|1PYT|B Chain B, Ternary Complex Of Procarboxypeptidase A, Proproteinase E,
And Chymotrypsinogen C
pdb|3KGQ|A Chain A, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
Length = 309
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 144/261 (55%), Gaps = 20/261 (7%)
Query: 186 GRKGHRMTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAK 245
R + + YH +++I+ ++D L +PQLV+ IGRS EGRP+ ++K S+G N
Sbjct: 1 ARSTNTFNYATYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSNRP 60
Query: 246 AFWIDGGIHAREWITPATVSFILSELVENREAQEDY---IKKIDFYVLPITNPDGYEYTH 302
A WID GIH+REWIT AT + + E+ + + +D ++ +TNPDG+ +TH
Sbjct: 61 AIWIDLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTH 120
Query: 303 TTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQI 362
+ RLWRK R + C G +D NRNW +G G+S C +
Sbjct: 121 SQNRLWRKTRSVT-SSSLCVG---------------VDANRNWDAGFGKAGASSSPCSET 164
Query: 363 YAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVG 422
Y G SE E +++ F+ ++ N KAF++ HSY Q +LYP+GY + PD +L++V
Sbjct: 165 YHGKYANSEVEVKSIVDFV-KDHGNFKAFLSIHSYSQLLLYPYGYTTQSIPDKTELNQVA 223
Query: 423 RAAAEAMRVAGGGAYTFVLMI 443
++A EA++ G +Y + +I
Sbjct: 224 KSAVEALKSLYGTSYKYGSII 244
>pdb|1CBX|A Chain A, Crystal Structure Of The Complex Between Carboxypeptidase
A And The Biproduct Analog Inhibitor L-Benzylsuccinate
At 2.0 Angstroms Resolution
pdb|1CPS|A Chain A, Structural Comparison Of Sulfodiimine And Sulfonamide
Inhibitors In Their Complexes With Zinc Enzymes
Length = 307
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 143/261 (54%), Gaps = 20/261 (7%)
Query: 186 GRKGHRMTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAK 245
R + + YH +++I+ ++D L +PQLV+ IGRS EGRP+ ++K S+G N
Sbjct: 1 ARSTNTFNYATYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSNRP 60
Query: 246 AFWIDGGIHAREWITPATVSFILSELVENREAQEDY---IKKIDFYVLPITNPDGYEYTH 302
A WID GIH+REWIT AT + + EN + + +D ++ +TNP+G+ +TH
Sbjct: 61 AIWIDLGIHSREWITQATGVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTH 120
Query: 303 TTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQI 362
+ RLWRK R + C G +D NRNW +G G+S C +
Sbjct: 121 SENRLWRKTRSVT-SSSLCVG---------------VDANRNWDAGFGKAGASSSPCSET 164
Query: 363 YAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVG 422
Y G SE E +++ F+ N+ N KAF++ HSY Q +LYP+GY + PD +L++V
Sbjct: 165 YHGKYANSEVEVKSIVDFV-KNHGNFKAFLSIHSYSQLLLYPYGYTTQSIPDKTELNQVA 223
Query: 423 RAAAEAMRVAGGGAYTFVLMI 443
++A A++ G +Y + +I
Sbjct: 224 KSAVAALKSLYGTSYKYGSII 244
>pdb|1HDU|A Chain A, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HDU|B Chain B, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HDU|D Chain D, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HDU|E Chain E, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HEE|A Chain A, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1HEE|B Chain B, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1HEE|D Chain D, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1HEE|E Chain E, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1IY7|A Chain A, Crystal Structure Of Cpa And Sulfamide-based Inhibitor
Complex
pdb|5CPA|A Chain A, Refined Crystal Structure Of Carboxypeptidase A At 1.54
Angstroms Resolution.
pdb|6CPA|A Chain A, Crystal Structure Of The Complex Of Carboxypeptidase A
With A Strongly Bound Phosphonate In A New Crystalline
Form: Comparison With Structures Of Other Complexes
pdb|7CPA|A Chain A, Comparison Of The Structures Of Three Carboxypeptidase A-
Phosphonate Complexes Determined By X-Ray
Crystallography
pdb|8CPA|A Chain A, Comparison Of The Structures Of Three Carboxypeptidase A-
Phosphonate Complexes Determined By X-Ray
Crystallography
pdb|3CPA|A Chain A, X-Ray Crystallographic Investigation Of Substrate Binding
To Carboxypeptidase A At Subzero Temperature
pdb|4CPA|A Chain A, Refined Crystal Structure Of The Potato Inhibitor Complex
Of Carboxypeptidase A At 2.5 Angstroms Resolution
pdb|4CPA|B Chain B, Refined Crystal Structure Of The Potato Inhibitor Complex
Of Carboxypeptidase A At 2.5 Angstroms Resolution
Length = 307
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 143/261 (54%), Gaps = 20/261 (7%)
Query: 186 GRKGHRMTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAK 245
R + + YH +++I+ ++D L +P+LV+ IGRS EGRP+ ++K S+G N
Sbjct: 1 ARSTNTFNYATYHTLDEIYDFMDLLVAQHPELVSKLQIGRSYEGRPIYVLKFSTGGSNRP 60
Query: 246 AFWIDGGIHAREWITPATVSFILSELVENREAQEDY---IKKIDFYVLPITNPDGYEYTH 302
A WID GIH+REWIT AT + + EN + + +D ++ +TNP+G+ +TH
Sbjct: 61 AIWIDLGIHSREWITQATGVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTH 120
Query: 303 TTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQI 362
+ RLWRK R + C G +D NRNW +G G+S C +
Sbjct: 121 SENRLWRKTRSVT-SSSLCVG---------------VDANRNWDAGFGKAGASSSPCSET 164
Query: 363 YAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVG 422
Y G SE E +++ F+ N+ N KAF++ HSY Q +LYP+GY + PD +L++V
Sbjct: 165 YHGKYANSEVEVKSIVDFV-KNHGNFKAFLSIHSYSQLLLYPYGYTTQSIPDKTELNQVA 223
Query: 423 RAAAEAMRVAGGGAYTFVLMI 443
++A A++ G +Y + +I
Sbjct: 224 KSAVAALKSLYGTSYKYGSII 244
>pdb|1BAV|A Chain A, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
pdb|1BAV|B Chain B, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
pdb|1BAV|C Chain C, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
pdb|1BAV|D Chain D, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
Length = 309
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 143/261 (54%), Gaps = 20/261 (7%)
Query: 186 GRKGHRMTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAK 245
R + + YH +++I+ ++D L +P+LV+ IGRS EGRP+ ++K S+G N
Sbjct: 1 ARSTNTFNYATYHTLDEIYDFMDLLVAQHPELVSKLQIGRSYEGRPIYVLKFSTGGSNRP 60
Query: 246 AFWIDGGIHAREWITPATVSFILSELVENREAQEDY---IKKIDFYVLPITNPDGYEYTH 302
A WID GIH+REWIT AT + + EN + + +D ++ +TNP+G+ +TH
Sbjct: 61 AIWIDLGIHSREWITQATGVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTH 120
Query: 303 TTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQI 362
+ RLWRK R + C G +D NRNW +G G+S C +
Sbjct: 121 SENRLWRKTRSVT-SSSLCVG---------------VDANRNWDAGFGKAGASSSPCSET 164
Query: 363 YAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVG 422
Y G SE E +++ F+ N+ N KAF++ HSY Q +LYP+GY + PD +L++V
Sbjct: 165 YHGKYANSEVEVKSIVDFV-KNHGNFKAFLSIHSYSQLLLYPYGYTTQSIPDKTELNQVA 223
Query: 423 RAAAEAMRVAGGGAYTFVLMI 443
++A A++ G +Y + +I
Sbjct: 224 KSAVAALKSLYGTSYKYGSII 244
>pdb|1AYE|A Chain A, Human Procarboxypeptidase A2
Length = 401
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 155/300 (51%), Gaps = 31/300 (10%)
Query: 144 VAAVKQYLEKAKLTYEVILEDVQRAXXXXXXXXXXXXLAVLTGRKGHR---MTFHKYHRM 200
V AVK +LE + Y +++EDVQ +L R+ R F YH +
Sbjct: 56 VQAVKVFLESQGIAYSIMIEDVQVLLDKENEE-------MLFNRRRERSGNFNFGAYHTL 108
Query: 201 EDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAKAFWIDGGIHAREWIT 260
E+I +D L +P LV+ +IG S E RP+ ++K S+G + A W+D GIHAREW+T
Sbjct: 109 EEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTG-GDKPAIWLDAGIHAREWVT 167
Query: 261 PATVSFILSELVEN---REAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPK 317
AT + +++V + + + +D ++LP+TNPDGY ++ T R+WRK R K
Sbjct: 168 QATALWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDGYVFSQTKNRMWRKTRSKV-S 226
Query: 318 GDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPFSEPETQAV 377
G C G +D NRNW +GG G+S C Y G SE E +++
Sbjct: 227 GSLCVG---------------VDPNRNWDAGFGGPGASSNPCSDSYHGPSANSEVEVKSI 271
Query: 378 SRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEAMRVAGGGAY 437
FI ++ +KAF+ HSY Q +++P+GY D+ +L V + AA+++R G Y
Sbjct: 272 VDFI-KSHGKVKAFIILHSYSQLLMFPYGYKCTKLDDFDELSEVAQKAAQSLRSLHGTKY 330
>pdb|3D4U|A Chain A, Bovine Thrombin-Activatable Fibrinolysis Inhibitor (Tafia)
In Complex With Tick-Derived Carboxypeptidase Inhibitor
Length = 309
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 138/241 (57%), Gaps = 21/241 (8%)
Query: 194 FHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAK-AFWIDGG 252
+ +YH + +I+ +++ + + YP +V IG S E PL ++K+S AK A WID G
Sbjct: 6 YEQYHSLNEIYSWIEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKEQRAKNAMWIDCG 65
Query: 253 IHAREWITPATVSFILSELVE---NREAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWR 309
IHAREWI+PA + + + + + +K +DFY++P+ N DGY+YT +R+WR
Sbjct: 66 IHAREWISPAFCLWFVGSVTYYYGKEKMHTNLLKHMDFYIMPVVNVDGYDYTWKKDRMWR 125
Query: 310 KNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGF-HWGGVGSSKEQCQQIYAGTGP 368
KNR K ++C G DL NRN+ HW G G+S C +IY GT P
Sbjct: 126 KNRSLHEK-NACVGTDL---------------NRNFASKHWCGEGASSSSCSEIYCGTYP 169
Query: 369 FSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEA 428
SEPE +AV+ F+ N ++KA+++ HSY Q I++P+ Y++ D+ +L V R A A
Sbjct: 170 ESEPEVKAVADFLRRNIKHIKAYISMHSYSQKIVFPYSYSRSRSKDHEELSLVAREAVFA 229
Query: 429 M 429
M
Sbjct: 230 M 230
>pdb|1CPX|A Chain A, Beta Form Of Carboxypeptidase A (Residues 3-307) From
Bovine Pancreas In An Orthorhombic Crystal Form With Two
Zinc Ions In The Active Site.
pdb|1F57|A Chain A, Carboxypeptidase A Complex With D-Cysteine At 1.75 A
pdb|1M4L|A Chain A, Structure Of Native Carboxypeptidase A At 1.25 Resolution
pdb|1ARL|A Chain A, Carboxypeptidase A With Zn Removed
pdb|2RFH|A Chain A, Crystal Structure Analysis Of
Cpa-2-Benzyl-3-Nitropropanoic Acid Complex
Length = 307
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 143/261 (54%), Gaps = 20/261 (7%)
Query: 186 GRKGHRMTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAK 245
R + + YH +++I+ ++D L +PQLV+ IGRS EGRP+ ++K S+G N
Sbjct: 1 ARSTNTFNYATYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSNRP 60
Query: 246 AFWIDGGIHAREWITPATVSFILSELVENREAQEDY---IKKIDFYVLPITNPDGYEYTH 302
A WID GIH+REWIT AT + + E+ + + +D ++ +TNPDG+ +TH
Sbjct: 61 AIWIDLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTH 120
Query: 303 TTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQI 362
+ RLWRK R + C G +D NRNW +G G+S C +
Sbjct: 121 SQNRLWRKTRSVT-SSSLCVG---------------VDANRNWDAGFGKAGASSSPCSET 164
Query: 363 YAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVG 422
Y G SE E +++ F+ ++ N KAF++ HSY Q +LYP+GY + PD +L++V
Sbjct: 165 YHGKYANSEVEVKSIVDFV-KDHGNFKAFLSIHSYSQLLLYPYGYTTQSIPDKTELNQVA 223
Query: 423 RAAAEAMRVAGGGAYTFVLMI 443
++A A++ G +Y + +I
Sbjct: 224 KSAVAALKSLYGTSYKYGSII 244
>pdb|1EE3|P Chain P, Cadmium-Substituted Bovine Pancreatic Carboxypeptidase A
(Alfa-Form) At Ph 7.5 And 2 Mm Chloride In Monoclinic
Crystal Form
pdb|1ELL|P Chain P, Cadmium-Substituted Bovine Pancreatic Carboxypeptidase A
(Alfa-Form) At Ph 7.5 And 0.25 M Chloride In Monoclinic
Crystal Form.
pdb|1ELM|P Chain P, Cadmium-Substituted Bovine Pacreatic Carboxypeptidase A
(Alfa-Form) At Ph 5.5 And 2 Mm Chloride In Monoclinic
Crystal Form.
pdb|1ZLH|A Chain A, Crystal Structure Of The Tick Carboxypeptidase Inhibitor
In Complex With Bovine Carboxypeptidase A
pdb|2ABZ|A Chain A, Crystal Structure Of C19aC43A MUTANT OF LEECH
Carboxypeptidase Inhibitor In Complex With Bovine
Carboxypeptidase A
pdb|2ABZ|B Chain B, Crystal Structure Of C19aC43A MUTANT OF LEECH
Carboxypeptidase Inhibitor In Complex With Bovine
Carboxypeptidase A
pdb|1ARM|A Chain A, Carboxypeptidase A With Zn Replaced By Hg
pdb|1YME|A Chain A, Structure Of Carboxypeptidase
pdb|3I1U|A Chain A, Carboxypeptidase A Inhibited By A Thiirane Mechanism-Based
Inactivator
pdb|3HLP|A Chain A, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
pdb|3HLP|B Chain B, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
pdb|3HUV|A Chain A, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
Length = 309
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 143/261 (54%), Gaps = 20/261 (7%)
Query: 186 GRKGHRMTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAK 245
R + + YH +++I+ ++D L +PQLV+ IGRS EGRP+ ++K S+G N
Sbjct: 1 ARSTNTFNYATYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSNRP 60
Query: 246 AFWIDGGIHAREWITPATVSFILSELVENREAQEDY---IKKIDFYVLPITNPDGYEYTH 302
A WID GIH+REWIT AT + + E+ + + +D ++ +TNPDG+ +TH
Sbjct: 61 AIWIDLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTH 120
Query: 303 TTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQI 362
+ RLWRK R + C G +D NRNW +G G+S C +
Sbjct: 121 SQNRLWRKTRSVT-SSSLCVG---------------VDANRNWDAGFGKAGASSSPCSET 164
Query: 363 YAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVG 422
Y G SE E +++ F+ ++ N KAF++ HSY Q +LYP+GY + PD +L++V
Sbjct: 165 YHGKYANSEVEVKSIVDFV-KDHGNFKAFLSIHSYSQLLLYPYGYTTQSIPDKTELNQVA 223
Query: 423 RAAAEAMRVAGGGAYTFVLMI 443
++A A++ G +Y + +I
Sbjct: 224 KSAVAALKSLYGTSYKYGSII 244
>pdb|4A94|A Chain A, Structure Of The Carboxypeptidase Inhibitor From Nerita
Versicolor In Complex With Human Cpa4
pdb|4A94|B Chain B, Structure Of The Carboxypeptidase Inhibitor From Nerita
Versicolor In Complex With Human Cpa4
Length = 310
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 139/255 (54%), Gaps = 21/255 (8%)
Query: 187 RKGHRMTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAK- 245
R + + YH +E I+ +D +A +P L IG S E RP+ ++K S+G +
Sbjct: 2 RSSNNFNYGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRP 61
Query: 246 AFWIDGGIHAREWITPATVSFILSELVENRE---AQEDYIKKIDFYVLPITNPDGYEYTH 302
A W++ GIH+REWI+ AT + ++V + + A ++K+D ++LP+ NPDGY YT
Sbjct: 62 AVWLNAGIHSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQ 121
Query: 303 TTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQI 362
T RLWRK R ++P G SC G D NRNW + G G+S C ++
Sbjct: 122 TQNRLWRKTRSRNP-GSSCIGADP---------------NRNWNASFAGKGASDNPCSEV 165
Query: 363 YAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVG 422
Y G SE E ++V FI + N K F+ HSY Q ++YP+GY+ K PD +LD+V
Sbjct: 166 YHGPHANSEVEVKSVVDFI-QKHGNFKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVA 224
Query: 423 RAAAEAMRVAGGGAY 437
R AA+A+ G Y
Sbjct: 225 RLAAKALASVSGTEY 239
>pdb|2PCU|A Chain A, Human Carboxypeptidase A4 In Complex With A Cleaved
Hexapeptide
Length = 305
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 138/252 (54%), Gaps = 21/252 (8%)
Query: 190 HRMTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAK-AFW 248
+ + YH +E I+ +D +A +P L IG S E RP+ ++K S+G + A W
Sbjct: 1 NNFNYGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAVW 60
Query: 249 IDGGIHAREWITPATVSFILSELVENRE---AQEDYIKKIDFYVLPITNPDGYEYTHTTE 305
++ GIH+REWI+ AT + ++V + + A ++K+D ++LP+ NPDGY YT T
Sbjct: 61 LNAGIHSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQN 120
Query: 306 RLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAG 365
RLWRK R ++P G SC G D NRNW + G G+S C ++Y G
Sbjct: 121 RLWRKTRSRNP-GSSCIGADP---------------NRNWNASFAGKGASDNPCSEVYHG 164
Query: 366 TGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAA 425
SE E ++V FI + N K F+ HSY Q ++YP+GY+ K PD +LD+V R A
Sbjct: 165 PHANSEVEVKSVVDFI-QKHGNFKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVARLA 223
Query: 426 AEAMRVAGGGAY 437
A+A+ G Y
Sbjct: 224 AKALASVSGTEY 235
>pdb|2BO9|A Chain A, Human Carboxypeptidase A4 In Complex With Human Latexin.
pdb|2BO9|C Chain C, Human Carboxypeptidase A4 In Complex With Human Latexin
Length = 308
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 138/252 (54%), Gaps = 21/252 (8%)
Query: 190 HRMTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAK-AFW 248
+ + YH +E I+ +D +A +P L IG S E RP+ ++K S+G + A W
Sbjct: 3 NNFNYGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAVW 62
Query: 249 IDGGIHAREWITPATVSFILSELVENRE---AQEDYIKKIDFYVLPITNPDGYEYTHTTE 305
++ GIH+REWI+ AT + ++V + + A ++K+D ++LP+ NPDGY YT T
Sbjct: 63 LNAGIHSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQN 122
Query: 306 RLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAG 365
RLWRK R ++P G SC G D NRNW + G G+S C ++Y G
Sbjct: 123 RLWRKTRSRNP-GSSCIGADP---------------NRNWNASFAGKGASDNPCSEVYHG 166
Query: 366 TGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAA 425
SE E ++V FI + N K F+ HSY Q ++YP+GY+ K PD +LD+V R A
Sbjct: 167 PHANSEVEVKSVVDFI-QKHGNFKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVARLA 225
Query: 426 AEAMRVAGGGAY 437
A+A+ G Y
Sbjct: 226 AKALASVSGTEY 237
>pdb|1KWM|A Chain A, Human Procarboxypeptidase B: Three-Dimensional Structure
And Implications For Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|1KWM|B Chain B, Human Procarboxypeptidase B: Three-Dimensional Structure
And Implications For Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
Length = 402
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 160/310 (51%), Gaps = 29/310 (9%)
Query: 133 SNIDIMVKADKVAAVKQYLEKAKLTYEVILEDVQRAXXXXXXXXXXXXLAVLTGRKGHRM 192
S +D VKA+ V+ L++ +L Y+V++ +++ GH
Sbjct: 50 STVDFRVKAEDTVTVENVLKQNELQYKVLISNLRNVVEAQFDSRVRAT--------GH-- 99
Query: 193 TFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAKAFWIDGG 252
++ KY++ E I + +A P L++ + IG + EGR + L+K+ N A ++D G
Sbjct: 100 SYEKYNKWETIEAWTQQVATENPALISRSVIGTTFEGRAIYLLKVGKAGQNKPAIFMDCG 159
Query: 253 IHAREWITPATVSFILSELVEN--REAQ-EDYIKKIDFYVLPITNPDGYEYTHTTERLWR 309
HAREWI+PA + + E V RE Q + + K+DFYVLP+ N DGY YT T R WR
Sbjct: 160 FHAREWISPAFCQWFVREAVRTYGREIQVTELLNKLDFYVLPVLNIDGYIYTWTKSRFWR 219
Query: 310 KNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPF 369
K R + G SC G D NRN+ W +G+S+ C + Y G
Sbjct: 220 KTR-STHTGSSCIGTDP---------------NRNFDAGWCEIGASRNPCDETYCGPAAE 263
Query: 370 SEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEAM 429
SE ET+A++ FI +++KA++T HSY Q ++YP+ Y K+ + A+L+ + +A + +
Sbjct: 264 SEKETKALADFIRNKLSSIKAYLTIHSYSQMMIYPYSYAYKLGENNAELNALAKATVKEL 323
Query: 430 RVAGGGAYTF 439
G YT+
Sbjct: 324 ASLHGTKYTY 333
>pdb|3FJU|A Chain A, Ascaris Suum Carboxypeptidase Inhibitor In Complex With
Human Carboxypeptidase A1
Length = 307
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 141/261 (54%), Gaps = 20/261 (7%)
Query: 187 RKGHRMTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAKA 246
R + YH +E+I+ +LD L P LV+ IG + EGRP+ ++K S+G A
Sbjct: 1 RSTDTFNYATYHTLEEIYDFLDLLVAENPHLVSKIQIGNTYEGRPIYVLKFSTGGSKRPA 60
Query: 247 FWIDGGIHAREWITPATVSFILSELVENREAQEDY---IKKIDFYVLPITNPDGYEYTHT 303
WID GIH+REW+T A+ + ++ ++ + + +D ++ +TNPDG+ +TH+
Sbjct: 61 IWIDTGIHSREWVTQASGVWFAKKITQDYGQDAAFTAILDTLDIFLEIVTNPDGFAFTHS 120
Query: 304 TERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIY 363
T R+WRK R + G C G +D NRNW +G G+S C + Y
Sbjct: 121 TNRMWRKTRSHT-AGSLCIG---------------VDPNRNWDAGFGLSGASSNPCSETY 164
Query: 364 AGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGR 423
G SE E +++ F+ ++ N+KAF++ HSY Q ++YP+GY + PD +LD++ +
Sbjct: 165 HGKFANSEVEVKSIVDFV-KDHGNIKAFISIHSYSQLLMYPYGYKTEPVPDQDELDQLSK 223
Query: 424 AAAEAMRVAGGGAYTFVLMIK 444
AA A+ G + + +IK
Sbjct: 224 AAVTALASLYGTKFNYGSIIK 244
>pdb|2V77|A Chain A, Crystal Structure Of Human Carboxypeptidase A1
pdb|2V77|B Chain B, Crystal Structure Of Human Carboxypeptidase A1
Length = 309
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 141/262 (53%), Gaps = 20/262 (7%)
Query: 186 GRKGHRMTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAK 245
R + YH +E+I+ +LD L P LV+ IG + EGRP+ ++K S+G
Sbjct: 1 ARSTDTFNYATYHTLEEIYDFLDLLVAENPHLVSKIQIGNTYEGRPIYVLKFSTGGSKRP 60
Query: 246 AFWIDGGIHAREWITPATVSFILSELVENREAQEDY---IKKIDFYVLPITNPDGYEYTH 302
A WID GIH+REW+T A+ + ++ ++ + + +D ++ +TNPDG+ +TH
Sbjct: 61 AIWIDTGIHSREWVTQASGVWFAKKITQDYGQDAAFTAILDTLDIFLEIVTNPDGFAFTH 120
Query: 303 TTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQI 362
+T R+WRK R + G C G +D NRNW +G G+S C +
Sbjct: 121 STNRMWRKTRSHT-AGSLCIG---------------VDPNRNWDAGFGLSGASSNPCSET 164
Query: 363 YAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVG 422
Y G SE E +++ F+ ++ N+KAF++ HSY Q ++YP+GY + PD +LD++
Sbjct: 165 YHGKFANSEVEVKSIVDFV-KDHGNIKAFISIHSYSQLLMYPYGYKTEPVPDQDELDQLS 223
Query: 423 RAAAEAMRVAGGGAYTFVLMIK 444
+AA A+ G + + +IK
Sbjct: 224 KAAVTALASLYGTKFNYGSIIK 245
>pdb|3D68|A Chain A, Crystal Structure Of A T325i/t329i/h333y/h335q Mutant Of
Thrombin- Activatable Fibrinolysis Inhibitor (tafi-iiyq)
pdb|3D68|B Chain B, Crystal Structure Of A T325i/t329i/h333y/h335q Mutant Of
Thrombin- Activatable Fibrinolysis Inhibitor (tafi-iiyq)
pdb|3D68|C Chain C, Crystal Structure Of A T325i/t329i/h333y/h335q Mutant Of
Thrombin- Activatable Fibrinolysis Inhibitor (tafi-iiyq)
Length = 424
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 155/311 (49%), Gaps = 29/311 (9%)
Query: 135 IDIMVKADKVAAVKQYLEKAKLTYEVILEDVQRAXXXXXXXXXXXXLAVLTGRKGHRMTF 194
+ V A V VK +L + + V+L DV+ + +
Sbjct: 69 VHFFVNASDVDNVKAHLNVSGIPCSVLLADVEDLIQQQISNDT-------VSPRASASYY 121
Query: 195 HKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAK-AFWIDGGI 253
+YH + +I+ +++++ + +P ++T IG S E PL ++K+S AK A WID GI
Sbjct: 122 EQYHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQTAKNAIWIDCGI 181
Query: 254 HAREWITPATVSFILSELVENREAQEDY---IKKIDFYVLPITNPDGYEYTHTTERLWRK 310
HAREWI+PA + + + + Y ++ +DFYV+P+ N DGY+Y+ R+WRK
Sbjct: 182 HAREWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKKNRMWRK 241
Query: 311 NRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGF-HWGGVGSSKEQCQQIYAGTGPF 369
NR + C G DL NRN+ HW G+S C + Y G P
Sbjct: 242 NRSFY-ANNHCIGTDL---------------NRNFASKHWCEEGASSSSCSETYCGLYPE 285
Query: 370 SEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEAM 429
SEPE +AV+ F+ N +KA+++ HSY Q+I++P+ Y + D+ +L V A A+
Sbjct: 286 SEPEVKAVASFLRRNINQIKAYISMHSYSQHIVFPYSYTRSKSKDHEELSLVASEAVRAI 345
Query: 430 -RVAGGGAYTF 439
+++ YT+
Sbjct: 346 EKISKNIRYTY 356
>pdb|3D66|A Chain A, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3D66|B Chain B, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3D66|C Chain C, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3D67|A Chain A, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi) In Complex With
2-Guanidino-Ethyl-Mercaptosuccinic Acid (Gemsa)
pdb|3D67|B Chain B, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi) In Complex With
2-Guanidino-Ethyl-Mercaptosuccinic Acid (Gemsa)
pdb|3D67|C Chain C, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi) In Complex With
2-Guanidino-Ethyl-Mercaptosuccinic Acid (Gemsa)
Length = 424
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 150/300 (50%), Gaps = 28/300 (9%)
Query: 135 IDIMVKADKVAAVKQYLEKAKLTYEVILEDVQRAXXXXXXXXXXXXLAVLTGRKGHRMTF 194
+ V A V VK +L + + V+L DV+ A + +
Sbjct: 69 VHFFVNASDVDNVKAHLNVSGIPCSVLLADVEDLIQQQISNDTVSPRASAS-------YY 121
Query: 195 HKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAK-AFWIDGGI 253
+YH + +I+ +++++ + +P ++T IG S E PL ++K+S AK A WID GI
Sbjct: 122 EQYHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQTAKNAIWIDCGI 181
Query: 254 HAREWITPATVSFILSELVENREAQEDY---IKKIDFYVLPITNPDGYEYTHTTERLWRK 310
HAREWI+PA + + + + Y ++ +DFYV+P+ N DGY+Y+ R+WRK
Sbjct: 182 HAREWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKKNRMWRK 241
Query: 311 NRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGF-HWGGVGSSKEQCQQIYAGTGPF 369
NR + C G DL NRN+ HW G+S C + Y G P
Sbjct: 242 NRSFY-ANNHCIGTDL---------------NRNFASKHWCEEGASSSSCSETYCGLYPE 285
Query: 370 SEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEAM 429
SEPE +AV+ F+ N +KA+++ HSY Q+I++P+ Y + D+ +L V A A+
Sbjct: 286 SEPEVKAVASFLRRNINQIKAYISMHSYSQHIVFPYSYTRSKSKDHEELSLVASEAVRAI 345
>pdb|1DTD|A Chain A, Crystal Structure Of The Complex Between The Leech
Carboxypeptidase Inhibitor And The Human
Carboxypeptidase A2 (Lci-Cpa2)
Length = 303
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 133/249 (53%), Gaps = 20/249 (8%)
Query: 192 MTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAKAFWIDG 251
F YH +E+I +D L +P LV+ +IG S E RP+ ++K S+G + A W+D
Sbjct: 1 FNFGAYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTG-GDKPAIWLDA 59
Query: 252 GIHAREWITPATVSFILSELVEN---REAQEDYIKKIDFYVLPITNPDGYEYTHTTERLW 308
GIHAREW+T AT + +++V + + + +D ++LP+TNPDGY ++ T R+W
Sbjct: 60 GIHAREWVTQATALWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDGYVFSQTKNRMW 119
Query: 309 RKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGP 368
RK R K G C G +D NRNW +GG G+S C Y G
Sbjct: 120 RKTRSKVSAGSLCVG---------------VDPNRNWDAGFGGPGASSNPCSDSYHGPSA 164
Query: 369 FSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEA 428
SE E +++ FI ++ +KAF+ HSY Q +++P+GY D+ +L V + AA++
Sbjct: 165 NSEVEVKSIVDFI-KSHGKVKAFIILHSYSQLLMFPYGYKCTKLDDFDELSEVAQKAAQS 223
Query: 429 MRVAGGGAY 437
+ G Y
Sbjct: 224 LSRLHGTKY 232
>pdb|1Z5R|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
pdb|1Z5R|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
pdb|1Z5R|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
pdb|1ZG7|A Chain A, Crystal Structure Of 2-(5-{[amino(Imino)methyl]amino}-2-
Chlorophenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG7|B Chain B, Crystal Structure Of 2-(5-{[amino(Imino)methyl]amino}-2-
Chlorophenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG7|C Chain C, Crystal Structure Of 2-(5-{[amino(Imino)methyl]amino}-2-
Chlorophenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG8|A Chain A, Crystal Structure Of (R)-2-(3-{[amino(Imino)
Methyl]amino}phenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG8|B Chain B, Crystal Structure Of (R)-2-(3-{[amino(Imino)
Methyl]amino}phenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG8|C Chain C, Crystal Structure Of (R)-2-(3-{[amino(Imino)
Methyl]amino}phenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG9|A Chain A, Crystal Structure Of 5-{[amino(Imino)methyl]amino}-2-
(Sulfanylmethyl)pentanoic Acid Bound To Activated
Porcine Pancreatic Carboxypeptidase B
pdb|1ZG9|B Chain B, Crystal Structure Of 5-{[amino(Imino)methyl]amino}-2-
(Sulfanylmethyl)pentanoic Acid Bound To Activated
Porcine Pancreatic Carboxypeptidase B
pdb|1ZG9|C Chain C, Crystal Structure Of 5-{[amino(Imino)methyl]amino}-2-
(Sulfanylmethyl)pentanoic Acid Bound To Activated
Porcine Pancreatic Carboxypeptidase B
pdb|2JEW|A Chain A, Crystal Structure Of ( (2s)-5-Amino-2-((1-N-Propyl-1h-
Imidazol-4-Yl)methyl)pentanoic Acid) Uk396,082 A Tafia
Inhibitor, Bound To Activated Porcine Pancreatic
Carboxypeptidaseb
pdb|2PIY|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
(S)-2-(3-Aminomethyl-Phenyl)-3-{hydroxy-
[(R)-2-Methyl-1-(3-Phenyl-Propane-1-Sulfonylamino)-
Propyl]- Phosphinoyl}-Propionic Acid {zk 528} Complex
pdb|2PIY|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
(S)-2-(3-Aminomethyl-Phenyl)-3-{hydroxy-
[(R)-2-Methyl-1-(3-Phenyl-Propane-1-Sulfonylamino)-
Propyl]- Phosphinoyl}-Propionic Acid {zk 528} Complex
pdb|2PIY|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
(S)-2-(3-Aminomethyl-Phenyl)-3-{hydroxy-
[(R)-2-Methyl-1-(3-Phenyl-Propane-1-Sulfonylamino)-
Propyl]- Phosphinoyl}-Propionic Acid {zk 528} Complex
pdb|2PIZ|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Guanidino-Phenyl)-3-[hydroxy-(3-
Phenyl-Propyl)-Phosphinoyl]-Propionic Acid Complex
pdb|2PIZ|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Guanidino-Phenyl)-3-[hydroxy-(3-
Phenyl-Propyl)-Phosphinoyl]-Propionic Acid Complex
pdb|2PIZ|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Guanidino-Phenyl)-3-[hydroxy-(3-
Phenyl-Propyl)-Phosphinoyl]-Propionic Acid Complex
pdb|2PJ0|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-2-Methyl-
Propyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ0|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-2-Methyl-
Propyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ0|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-2-Methyl-
Propyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ1|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-aminomethyl-phenyl)-[((r)-1-
Benzyloxycarbonylamino-2-methyl-propyl)-hydroxy-
Phosphinoyloxy]-acetic Acid Complex
pdb|2PJ1|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-aminomethyl-phenyl)-[((r)-1-
Benzyloxycarbonylamino-2-methyl-propyl)-hydroxy-
Phosphinoyloxy]-acetic Acid Complex
pdb|2PJ1|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-aminomethyl-phenyl)-[((r)-1-
Benzyloxycarbonylamino-2-methyl-propyl)-hydroxy-
Phosphinoyloxy]-acetic Acid Complex
pdb|2PJ2|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzyloxycarbonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]-Propionic Acid Complex
pdb|2PJ2|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzyloxycarbonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]-Propionic Acid Complex
pdb|2PJ2|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzyloxycarbonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]-Propionic Acid Complex
pdb|2PJ3|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-Guanidino-Phenyl)-{hydroxy-[(R)-2-
Methyl-1-(3-Phenyl-Propionylamino)-Propyl]-
Phosphinoyloxy}- Acetic Acid Complex
pdb|2PJ3|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-Guanidino-Phenyl)-{hydroxy-[(R)-2-
Methyl-1-(3-Phenyl-Propionylamino)-Propyl]-
Phosphinoyloxy}- Acetic Acid Complex
pdb|2PJ3|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-Guanidino-Phenyl)-{hydroxy-[(R)-2-
Methyl-1-(3-Phenyl-Propionylamino)-Propyl]-
Phosphinoyloxy}- Acetic Acid Complex
pdb|2PJ4|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-Benzyloxycarbonylamino-Cyclohexyl-
Methyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ4|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-Benzyloxycarbonylamino-Cyclohexyl-
Methyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ5|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-Hexyl)-
Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJ5|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-Hexyl)-
Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJ5|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-Hexyl)-
Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJ6|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{hydroxy-
[(R)-2-Methyl-1-(2-Phenyl-Ethanesulfonylamino)-Propyl]-
Phosphinoyl}-Propionic Acid Complex
pdb|2PJ7|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzenesulfonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]- Propionic Acid Complex
pdb|2PJ7|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzenesulfonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]- Propionic Acid Complex
pdb|2PJ7|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzenesulfonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]- Propionic Acid Complex
pdb|2PJ8|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{[(R)-1-
(Biphenyl-4-Sulfonylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-Propionic Acid Complex
pdb|2PJ8|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{[(R)-1-
(Biphenyl-4-Sulfonylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-Propionic Acid Complex
pdb|2PJ8|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{[(R)-1-
(Biphenyl-4-Sulfonylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-Propionic Acid Complex
pdb|2PJ9|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{[(R)-1-
(Benzo[1,2,
5]thiadiazole-4-Sulfonylamino)-2-Methyl-Propyl]-
Hydroxy-Phosphinoyl}-Propionic Acid Complex
pdb|2PJA|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
3-{[(R)-1-((S)-2-Benzyloxycarbonylamino-
3-Phenyl-Propionylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-2-(3-Guanidino-Phenyl)-Propionic Acid
Complex
pdb|2PJA|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
3-{[(R)-1-((S)-2-Benzyloxycarbonylamino-
3-Phenyl-Propionylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-2-(3-Guanidino-Phenyl)-Propionic Acid
Complex
pdb|2PJA|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
3-{[(R)-1-((S)-2-Benzyloxycarbonylamino-
3-Phenyl-Propionylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-2-(3-Guanidino-Phenyl)-Propionic Acid
Complex
pdb|2PJB|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
2-(3-aminomethyl-phenyl)-3-{[1-((s)-2-
Benzyloxycarbonylamino-3-phenyl-propane-1-
sulfonylamino)-2-
Methyl-propyl]-hydroxy-phosphinoyl}-propionic Acid
Complex
pdb|2PJB|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
2-(3-aminomethyl-phenyl)-3-{[1-((s)-2-
Benzyloxycarbonylamino-3-phenyl-propane-1-
sulfonylamino)-2-
Methyl-propyl]-hydroxy-phosphinoyl}-propionic Acid
Complex
pdb|2PJB|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
2-(3-aminomethyl-phenyl)-3-{[1-((s)-2-
Benzyloxycarbonylamino-3-phenyl-propane-1-
sulfonylamino)-2-
Methyl-propyl]-hydroxy-phosphinoyl}-propionic Acid
Complex
pdb|2PJC|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
({(R)-1-[(S)-2-Benzyloxycarbonylamino-3-
(4-Hydroxy-Phenyl)-Propionylamino]-2-Methyl-Propyl}-
Hydroxy-Phosphinoyloxy)-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJC|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
({(R)-1-[(S)-2-Benzyloxycarbonylamino-3-
(4-Hydroxy-Phenyl)-Propionylamino]-2-Methyl-Propyl}-
Hydroxy-Phosphinoyloxy)-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJC|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
({(R)-1-[(S)-2-Benzyloxycarbonylamino-3-
(4-Hydroxy-Phenyl)-Propionylamino]-2-Methyl-Propyl}-
Hydroxy-Phosphinoyloxy)-(3-Guanidino-Phenyl)-Acetic Acid
Complex
Length = 306
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 137/254 (53%), Gaps = 21/254 (8%)
Query: 189 GHRMTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAKAFW 248
GH ++ KY+ E I + + P L++ T IG + G + L+K+ PN A +
Sbjct: 3 GH--SYEKYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPGPNKPAIF 60
Query: 249 IDGGIHAREWITPATVSFILSELVEN---REAQEDYIKKIDFYVLPITNPDGYEYTHTTE 305
+D G HAREWI+ A + + E V +++ K+DFYVLP+ N DGY YT T
Sbjct: 61 MDCGFHAREWISHAFCQWFVREAVLTYGYESHMTEFLNKLDFYVLPVLNIDGYIYTWTKN 120
Query: 306 RLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAG 365
R+WRK R + G +C G D NRN+ W G+S + C + Y G
Sbjct: 121 RMWRKTRSTN-AGTTCIGTDP---------------NRNFDAGWCTTGASTDPCDETYCG 164
Query: 366 TGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAA 425
+ SE ET+A++ FI N +++KA++T HSY Q ILYP+ Y+ K+P + A+L+ + +AA
Sbjct: 165 SAAESEKETKALADFIRNNLSSIKAYLTIHSYSQMILYPYSYDYKLPENNAELNNLAKAA 224
Query: 426 AEAMRVAGGGAYTF 439
+ + G YT+
Sbjct: 225 VKELATLYGTKYTY 238
>pdb|3LMS|A Chain A, Structure Of Human Activated Thrombin-Activatable
Fibrinolys Inhibitor, Tafia, In Complex With
Tick-Derived Funnelin Inh Tci
Length = 309
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 132/241 (54%), Gaps = 21/241 (8%)
Query: 194 FHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAK-AFWIDGG 252
+ +YH + +I+ +++++ + +P ++T IG S E PL ++K+S AK A WID G
Sbjct: 6 YEQYHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQAAKNAIWIDCG 65
Query: 253 IHAREWITPATVSFILSELVENREAQEDY---IKKIDFYVLPITNPDGYEYTHTTERLWR 309
IHAREWI+PA + + + + Y ++ +DFYV+P+ N DGY+Y+ R+WR
Sbjct: 66 IHAREWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKKNRMWR 125
Query: 310 KNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGF-HWGGVGSSKEQCQQIYAGTGP 368
KNR + C G DL NRN+ HW G+S C + Y G P
Sbjct: 126 KNR-SFYANNHCIGTDL---------------NRNFASKHWCEEGASSSSCSETYCGLYP 169
Query: 369 FSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEA 428
SEPE +AV+ F+ N +KA+++ HSY Q+I++P+ Y + D+ +L V A A
Sbjct: 170 ESEPEVKAVASFLRRNINQIKAYISMHSYSQHIVFPYSYTRSKSKDHEELSLVASEAVRA 229
Query: 429 M 429
+
Sbjct: 230 I 230
>pdb|1ZLI|A Chain A, Crystal Structure Of The Tick Carboxypeptidase Inhibitor
In Complex With Human Carboxypeptidase B
Length = 309
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/254 (35%), Positives = 137/254 (53%), Gaps = 21/254 (8%)
Query: 189 GHRMTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAKAFW 248
GH ++ KY+ E I + +A P L++ + IG + EGR + L+K+ N A +
Sbjct: 5 GH--SYEKYNNWETIEAWTQQVATENPALISRSVIGTTFEGRAIYLLKVGKAGQNKPAIF 62
Query: 249 IDGGIHAREWITPATVSFILSELVEN--REAQ-EDYIKKIDFYVLPITNPDGYEYTHTTE 305
+D G HAREWI+PA + + E V RE Q + + K+DFYVLP+ N DGY YT T
Sbjct: 63 MDCGFHAREWISPAFCQWFVREAVRTYGREIQVTELLNKLDFYVLPVLNIDGYIYTWTKS 122
Query: 306 RLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAG 365
R WRK R + G SC G D NRN+ W +G+S+ C + Y G
Sbjct: 123 RFWRKTR-STHTGSSCIGTDP---------------NRNFDAGWCEIGASRNPCDETYCG 166
Query: 366 TGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAA 425
SE ET+A++ FI +++KA++T HSY Q ++YP+ Y K+ + A+L+ + +A
Sbjct: 167 PAAESEKETKALADFIRNKLSSIKAYLTIHSYSQMMIYPYSYAYKLGENNAELNALAKAT 226
Query: 426 AEAMRVAGGGAYTF 439
+ + G YT+
Sbjct: 227 VKELASLHGTKYTY 240
>pdb|1JQG|A Chain A, Crystal Structure Of The Carboxypeptidase A From
Helicoverpa Armigera
Length = 433
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 149/298 (50%), Gaps = 26/298 (8%)
Query: 137 IMVKADKVAAVKQYLEKAKLTYEVILEDVQRAXXXXXXXXXXXXLAVLTGRKGHRMTFHK 196
++V K + +L+++ + Y++ +E+V+ A + R++F K
Sbjct: 63 VLVPKFKREIFENFLKQSGVQYKLEVENVKEQLELEDQLLAAA--AAKSNSTRSRLSFDK 120
Query: 197 YHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV---PNAKAFWIDGGI 253
H E++ YL LA+ +P +VT+ + G+S EGR ++ ++IS+ + + +
Sbjct: 121 IHSYEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRISTTNFQDASKPVVMMQSLL 180
Query: 254 HAREWIT-PATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNR 312
H REW+T PAT+ I +++ E+ D I ID+ +LP+ NPDGY +T +R WRKNR
Sbjct: 181 HCREWVTLPATLYAIHKLVIDVTES--DLINNIDWIILPVANPDGYVHTFGGDRYWRKNR 238
Query: 313 RKS-PKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPFSE 371
G+ C G +DLNRN+G +W G SS C + G FSE
Sbjct: 239 ATGYMAGNLCMG---------------VDLNRNFGMNW-GTASSSSVCSDTFHGRSAFSE 282
Query: 372 PETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEAM 429
PE+ + I + M ++ HS+G ILY +G N +P + L +G A+A+
Sbjct: 283 PESSVIRDIIAEHRNRMALYLDIHSFGSMILYGYG-NGVLPSNALQLHLIGVQMAQAI 339
>pdb|1CPB|B Chain B, Structure Of Carboxypeptidase B At 2.8 Angstroms
Resolution
Length = 217
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 94/160 (58%), Gaps = 16/160 (10%)
Query: 280 DYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTI 339
+++ K+DFYVLP+ N DGY YT TT R+WRK R + G SC+G DL
Sbjct: 6 EFLDKLDFYVLPVVNIDGYIYTWTTNRMWRKTR-STRAGSSCTGTDL------------- 51
Query: 340 DLNRNWGFHWGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQ 399
NRN+ W +G+S C + Y G+ SE E++AV+ FI + +++KA++T HSY Q
Sbjct: 52 --NRNFDAGWCSIGASNNPCSETYCGSAAESEKESKAVADFIRNHLSSIKAYLTIHSYSQ 109
Query: 400 YILYPWGYNKKVPPDYADLDRVGRAAAEAMRVAGGGAYTF 439
+LYP+ Y+ K+P + +L+ + + A + + G Y++
Sbjct: 110 MMLYPYSYDYKLPKNNVELNTLAKGAVKKLASLHGTTYSY 149
>pdb|1OBR|A Chain A, Carboxypeptidase T
pdb|3V7Z|A Chain A, Carboxypeptidase T With Gemsa
pdb|4DUK|A Chain A, Carboxypeptidase T With L-benzylsuccinic Acid
Length = 326
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 111/253 (43%), Gaps = 31/253 (12%)
Query: 197 YHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV---PNAKAFWIDGGI 253
YH ++ ++ +A YP +V IG+S EGR L VKIS V N
Sbjct: 9 YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDENEPEVLYTALH 68
Query: 254 HAREWITPATVSFILSELVENREAQE---DYIKKIDFYVLPITNPDGYEY--THTTERLW 308
HARE +T + L +N + + + Y++ NPDG EY + + + W
Sbjct: 69 HAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYKSW 128
Query: 309 RKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQ-QIYAGTG 367
RKNR+ + G S G DL NRN+G+ WG G S + Y G
Sbjct: 129 RKNRQPN-SGSSYVGTDL---------------NRNYGYKWGCCGGSSGSPSSETYRGRS 172
Query: 368 PFSEPETQAVSRFI----LANNANMKAFVTFHSYGQYILYPWGYN-KKVPPDYADLD-RV 421
FS PET A+ FI + +K +TFH+Y + ILYP+GY VP D D V
Sbjct: 173 AFSAPETAAMRDFINSRVVGGKQQIKTLITFHTYSELILYPYGYTYTDVPSDMTQDDFNV 232
Query: 422 GRAAAEAMRVAGG 434
+ A M G
Sbjct: 233 FKTMANTMAQTNG 245
>pdb|3V38|A Chain A, Carboxypeptidase T Mutant L254n
Length = 326
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 111/253 (43%), Gaps = 31/253 (12%)
Query: 197 YHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV---PNAKAFWIDGGI 253
YH ++ ++ +A YP +V IG+S EGR L VKIS V N
Sbjct: 9 YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDENEPEVLYTALH 68
Query: 254 HAREWITPATVSFILSELVENREAQE---DYIKKIDFYVLPITNPDGYEY--THTTERLW 308
HARE +T + L +N + + + Y++ NPDG EY + + + W
Sbjct: 69 HAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYKSW 128
Query: 309 RKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQ-QIYAGTG 367
RKNR+ + G S G DL NRN+G+ WG G S + Y G
Sbjct: 129 RKNRQPN-SGSSYVGTDL---------------NRNYGYKWGCCGGSSGSPSSETYRGRS 172
Query: 368 PFSEPETQAVSRFI----LANNANMKAFVTFHSYGQYILYPWGYN-KKVPPDYADLD-RV 421
FS PET A+ FI + +K +TFH+Y + ILYP+GY VP D D V
Sbjct: 173 AFSAPETAAMRDFINSRVVGGKQQIKTLITFHTYSELILYPYGYTYTDVPSDMTQDDFNV 232
Query: 422 GRAAAEAMRVAGG 434
+ A M G
Sbjct: 233 FKTMANTMAQTNG 245
>pdb|3QNV|A Chain A, Carboxypeptidase T
pdb|4DJL|A Chain A, Carboxypeptidase T With N-sulfamoyl-l-phenylalanine
Length = 323
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 111/253 (43%), Gaps = 31/253 (12%)
Query: 197 YHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV---PNAKAFWIDGGI 253
YH ++ ++ +A YP +V IG+S EGR L VKIS V N
Sbjct: 9 YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDENEPEVLYTALH 68
Query: 254 HAREWITPATVSFILSELVENREAQE---DYIKKIDFYVLPITNPDGYEY--THTTERLW 308
HARE +T + L +N + + + Y++ NPDG EY + + + W
Sbjct: 69 HAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYKSW 128
Query: 309 RKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQ-QIYAGTG 367
RKNR+ + G S G DL NRN+G+ WG G S + Y G
Sbjct: 129 RKNRQPN-SGSSYVGTDL---------------NRNYGYKWGCCGGSSGSPSSETYRGRS 172
Query: 368 PFSEPETQAVSRFI----LANNANMKAFVTFHSYGQYILYPWGYN-KKVPPDYADLD-RV 421
FS PET A+ FI + +K +TFH+Y + ILYP+GY VP D D V
Sbjct: 173 AFSAPETAAMRDFINSRVVGGKQQIKTLITFHTYSELILYPYGYTYTDVPSDMTQDDFNV 232
Query: 422 GRAAAEAMRVAGG 434
+ A M G
Sbjct: 233 FKTMANTMAQTNG 245
>pdb|3PRT|A Chain A, Mutant Of The Carboxypeptidase T
Length = 323
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 110/253 (43%), Gaps = 31/253 (12%)
Query: 197 YHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV---PNAKAFWIDGGI 253
YH ++ ++ +A YP +V IG+S EGR L VKIS V N
Sbjct: 9 YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDENEPEVLYTALH 68
Query: 254 HAREWITPATVSFILSELVENREAQE---DYIKKIDFYVLPITNPDGYEY--THTTERLW 308
HARE +T + L +N + + + Y++ NPDG EY + + + W
Sbjct: 69 HAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYKSW 128
Query: 309 RKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQ-QIYAGTG 367
RKNR+ + G S G DL NRN+G+ WG G S + Y G
Sbjct: 129 RKNRQPN-SGSSYVGTDL---------------NRNYGYKWGCCGGSSGSPSSETYRGRS 172
Query: 368 PFSEPETQAVSRFI----LANNANMKAFVTFHSYGQYILYPWGYN-KKVPPDYADLD-RV 421
FS PET A+ FI + +K +TFH+Y + ILYP+ Y VP D D V
Sbjct: 173 AFSAPETAAMRDFINSRVVGGKQQIKTLITFHTYSELILYPYSYTYTDVPSDMTQDDFNV 232
Query: 422 GRAAAEAMRVAGG 434
+ A M G
Sbjct: 233 FKTMANTMAQTNG 245
>pdb|1CPB|A Chain A, Structure Of Carboxypeptidase B At 2.8 Angstroms
Resolution
Length = 82
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 189 GHRMTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAKAFW 248
GH ++ KY+ E I + + +A P L++ + IG + G + L+K+ N A +
Sbjct: 3 GH--SYEKYNNWETIEAWTEQVASENPDLISRSAIGTTFLGNTIYLLKVGKPGSNKPAVF 60
Query: 249 IDGGIHAREWITPATVSFILSE 270
+D G HAREWI+PA + + E
Sbjct: 61 MDCGFHAREWISPAFCQWFVRE 82
>pdb|3L2N|A Chain A, Crystal Structure Of Putative Carboxypeptidase A
(yp_562911.1) From Shewanella Denitrificans Os-217 At
2.39 A Resolution
pdb|3L2N|B Chain B, Crystal Structure Of Putative Carboxypeptidase A
(yp_562911.1) From Shewanella Denitrificans Os-217 At
2.39 A Resolution
Length = 395
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 192 MTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAKAFWIDG 251
T + Y R D+ + Q +P LV+ +G +L+GR LVK+ P+ K+ WI
Sbjct: 128 FTPYSYERHLDLISAV----QLHP-LVSTEHLGLTLDGRDXTLVKVGDDDPSKKSIWITA 182
Query: 252 GIHAREWITPATVSFILSELVENR-EAQEDYIKKIDFYVLPITNPDG 297
H E V +L++L++N + + K +FY++P NPDG
Sbjct: 183 RQHPGETXAEWLVEGLLNQLLDNDCPTSKALLDKANFYIVPNXNPDG 229
>pdb|1QMU|A Chain A, Duck Carboxypeptidase D Domain Ii
pdb|1H8L|A Chain A, Duck Carboxypeptidase D Domain Ii In Complex With Gemsa
Length = 380
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 86/215 (40%), Gaps = 48/215 (22%)
Query: 196 KYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKIS--SGVPNA--KAFWIDG 251
++H D+ +L A YP + L +G+S+E R L +++IS G+ A F G
Sbjct: 9 RHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGIHEAGEPEFKYIG 68
Query: 252 GIHAREWITPATVSFILSELVENREAQE---DYIKKIDFYVLPITNPDGYEYTHTTERLW 308
+H E + + ++ L +N D ++ +++P NPDGYE
Sbjct: 69 NMHGNEVVGRELLLNLIEYLCKNFGTDPEVTDLVQSTRIHIMPSMNPDGYE--------- 119
Query: 309 RKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGP 368
KS +GD + + DLNRN+ Q + T P
Sbjct: 120 -----KSQEGDRGGTV-------GRNNSNNYDLNRNF-------------PDQFFQVTDP 154
Query: 369 FSEPETQAVSR------FILANNANMKAFVTFHSY 397
+PET AV F+L+ N + + V + +
Sbjct: 155 -PQPETLAVMSWLKTYPFVLSANLHGGSLVVNYPF 188
>pdb|1UWY|A Chain A, Crystal Structure Of Human Carboxypeptidase M
Length = 426
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 83/219 (37%), Gaps = 58/219 (26%)
Query: 197 YHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISS-------GVPNAKAFWI 249
YHR E + +L +AQ Y + L IG+S++GR L ++ + G+P K
Sbjct: 5 YHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRFPKEHRIGIPEFKYV-- 62
Query: 250 DGGIHAREWITPATVSFILSELVENREAQEDYIKKID---FYVLPITNPDGYEYTHTTER 306
+H E + + ++ LV + + I+ +++P NPDG+E
Sbjct: 63 -ANMHGDETVGRELLLHLIDYLVTSDGKDPEITNLINSTRIHIMPSMNPDGFEAV----- 116
Query: 307 LWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNW--GFHWGGVGSSKEQCQQIYA 364
K C Y E+ DLNRN+ F + V
Sbjct: 117 ----------KKPDC------YYSIGRENYNQYDLNRNFPDAFEYNNVS----------- 149
Query: 365 GTGPFSEPETQAVSR------FILANNANMKAFVTFHSY 397
+PET AV + F+L+ N + A V + +
Sbjct: 150 -----RQPETVAVMKWLKTETFVLSANLHGGALVASYPF 183
>pdb|3MN8|A Chain A, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
pdb|3MN8|B Chain B, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
pdb|3MN8|C Chain C, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
pdb|3MN8|D Chain D, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
Length = 435
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 13/112 (11%)
Query: 197 YHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSG-------VPNAKAFWI 249
Y E + L + YP + +GRSLEGR L ++IS P K
Sbjct: 40 YASQEQLEDLFAGLEKAYPNQAKVHFLGRSLEGRNLLALQISRNTRSRNLLTPPVKYI-- 97
Query: 250 DGGIHAREWITPATVSFILSELVENREAQED---YIKKIDFYVLPITNPDGY 298
+H E + + ++ L+ N E D + D Y++P NPDGY
Sbjct: 98 -ANMHGDETVGRQLLVYMAQYLLGNHERISDLGQLVNSTDIYLVPTMNPDGY 148
>pdb|2NSM|A Chain A, Crystal Structure Of The Human Carboxypeptidase N
(kininase I) Catalytic Domain
Length = 439
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 86/225 (38%), Gaps = 45/225 (20%)
Query: 196 KYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKIS--SGV--PNAKAFWIDG 251
++HR +D+ L + P + + IGRS+EGR L +++ S G+ P G
Sbjct: 5 RHHRYDDLVRTLYKVQNECPGITRVYSIGRSVEGRHLYVLEFSDHPGIHEPLEPEVKYVG 64
Query: 252 GIHAREWI---TPATVSFILSELVENREAQ-EDYIKKIDFYVLPITNPDGYEYTHTTERL 307
+H E + +S L E NR + I+ ++LP NPDGYE
Sbjct: 65 NMHGNEALGRELMLQLSEFLCEEFRNRNQRIVQLIQDTRIHILPSMNPDGYEVA------ 118
Query: 308 WRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRN---------WGFHWGGVGSSKEQ 358
+ G + Y + +DLNRN + +GG
Sbjct: 119 ------------AAQGPNKPGYLVGRNNANGVDLNRNFPDLNTYIYYNEKYGGPNHHLPL 166
Query: 359 CQQIYAGTGPFSEPETQAVSR------FILANNANMKAFVTFHSY 397
+ EPET+AV R F+L+ N + A V + Y
Sbjct: 167 PDNWKSQV----EPETRAVIRWMHSFNFVLSANLHGGAVVANYPY 207
>pdb|3K2K|A Chain A, Crystal Structure Of Putative Carboxypeptidase
(Yp_103406.1) From Burkholderia Mallei Atcc 23344 At
2.49 A Resolution
Length = 403
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 15/118 (12%)
Query: 190 HRMTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNA----- 244
H F Y E+ H Q PQ ++ ++GR++EGRP LV + G P+
Sbjct: 126 HYAYFEPY--SEERHSEFLGAVQQXPQ-ASVVELGRTVEGRPXSLVVL--GTPDEAGAAK 180
Query: 245 KAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKK-----IDFYVLPITNPDG 297
K WI H E + ++ LV + D + + FY++P NPDG
Sbjct: 181 KKVWIIARQHPGESXAEWFIEGLVKRLVGWGDWSGDPVARKLYDHATFYIVPNXNPDG 238
>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or265.
pdb|4HQD|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or265
Length = 169
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 6 KDIVCLLVSKNANINIVNGEGRTPRDVCKH--NDEARKLL 43
K+IV LL+SK A++N + +GRTP D+ + N+E KLL
Sbjct: 116 KEIVKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLL 155
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 6 KDIVCLLVSKNANINIVNGEGRTP 29
K+IV LL+SK A++N + +GRTP
Sbjct: 50 KEIVKLLISKGADVNAKDSDGRTP 73
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 6 KDIVCLLVSKNANINIVNGEGRTP 29
K+IV LL+SK A++N + +GRTP
Sbjct: 83 KEIVKLLISKGADVNAKDSDGRTP 106
>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or264.
pdb|4GPM|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or264
Length = 169
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 6 KDIVCLLVSKNANINIVNGEGRTPRDVCKH--NDEARKLL 43
K++V LL+SK A++N + +GRTP D+ + N+E KLL
Sbjct: 116 KEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLL 155
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 19/24 (79%)
Query: 6 KDIVCLLVSKNANINIVNGEGRTP 29
K++V LL+SK A++N + +GRTP
Sbjct: 50 KEVVKLLISKGADVNAKDSDGRTP 73
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 19/24 (79%)
Query: 6 KDIVCLLVSKNANINIVNGEGRTP 29
K++V LL+SK A++N + +GRTP
Sbjct: 83 KEVVKLLISKGADVNAKDSDGRTP 106
>pdb|2QVP|A Chain A, Crystal Structure Of A Putative Metallopeptidase
(Sama_0725) From Shewanella Amazonensis Sb2b At 2.00 A
Resolution
pdb|2QVP|B Chain B, Crystal Structure Of A Putative Metallopeptidase
(Sama_0725) From Shewanella Amazonensis Sb2b At 2.00 A
Resolution
pdb|2QVP|C Chain C, Crystal Structure Of A Putative Metallopeptidase
(Sama_0725) From Shewanella Amazonensis Sb2b At 2.00 A
Resolution
Length = 275
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 12/86 (13%)
Query: 231 PLRLVKIS---SGVPNAKAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDF 287
PL L++ +G+PN I G H E P + LS+L + K+++
Sbjct: 52 PLYLLQSPGQKAGLPN---LLISAGFHGEESAGPWGLLHFLSQL------DGELFKRVNL 102
Query: 288 YVLPITNPDGYEYTHTTERLWRKNRR 313
VLP+ NP G+ H L R
Sbjct: 103 SVLPLVNPTGFAKGHRFNELGENPNR 128
>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or267.
pdb|4HB5|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or267
Length = 169
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 6 KDIVCLLVSKNANINIVNGEGRTPRDVCKH--NDEARKLL 43
K+IV LL+SK A+ N + +GRTP D+ + N+E KLL
Sbjct: 116 KEIVKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLL 155
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 6 KDIVCLLVSKNANINIVNGEGRTPRDVCKHN--DEARKLLLA 45
K+IV LL+SK A+ N + +GRTP N E KLLL+
Sbjct: 50 KEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLS 91
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 6 KDIVCLLVSKNANINIVNGEGRTPRDVCKHN--DEARKLLLA 45
K+IV LL+SK A+ N + +GRTP N E KLLL+
Sbjct: 83 KEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLS 124
>pdb|3IEH|A Chain A, Crystal Structure Of Putative Metallopeptidase
(Yp_001051774.1) From Shewanella Baltica Os155 At 2.45 A
Resolution
Length = 276
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Query: 239 SGVPNAKAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGY 298
SG+P + I G H E P + LSE A D ++++ +LP+ NP G+
Sbjct: 64 SGLP---SLLISAGFHGEESAGPWGLLHFLSE------ASADLFERVNLSLLPLVNPTGF 114
Query: 299 EYTH 302
H
Sbjct: 115 SRGH 118
>pdb|4A37|A Chain A, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa
pdb|4A37|B Chain B, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa
pdb|4A38|A Chain A, Metallo-Carboxypeptidase From Pseudomonas Aureginosa In
Complex With L-Benzylsuccinic Acid
pdb|4A38|B Chain B, Metallo-Carboxypeptidase From Pseudomonas Aureginosa In
Complex With L-Benzylsuccinic Acid
pdb|4A39|A Chain A, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa In
Complex With (2-Guanidinoethylmercapto)succinic Acid
pdb|4A39|B Chain B, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa In
Complex With (2-Guanidinoethylmercapto)succinic Acid
Length = 388
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 223 IGRSLEGRPLRLVKISSGVPNAKAFWI----DGGIHAREWITPATVSFILSELVENREAQ 278
+G S++GR + L+++ + W+ G H EW + + + ++ E Q
Sbjct: 149 VGTSVQGRDIELLRVRRHPDSHLKLWVIAQQHPGEHMAEWFMEGLIERL--QRPDDTEMQ 206
Query: 279 EDYIKKIDFYVLPITNPDG 297
++K D Y++P NPDG
Sbjct: 207 R-LLEKADLYLVPNMNPDG 224
>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or266.
pdb|4GMR|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or266
Length = 169
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 6 KDIVCLLVSKNANINIVNGEGRTPRDVCKH--NDEARKLL 43
K++V LL+S+ A+ N + +GRTP D+ + N+E KLL
Sbjct: 116 KEVVKLLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLL 155
>pdb|3B2Y|A Chain A, Crystal Structure Of A Putative Metallopeptidase
(Sden_2526) From Shewanella Denitrificans Os217 At 1.74
A Resolution
pdb|3B2Y|B Chain B, Crystal Structure Of A Putative Metallopeptidase
(Sden_2526) From Shewanella Denitrificans Os217 At 1.74
A Resolution
Length = 275
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 8/113 (7%)
Query: 202 DIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAKAFWIDGGIHAREWITP 261
DI + LA+ +L + S++ + L + +S + + I G H E P
Sbjct: 24 DIDAFYAQLAEEVNRLGLKKNTLGSVDSFAINLYQSASQRSDLPSLLISSGFHGEEAAGP 83
Query: 262 -ATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRR 313
+ F+ R Q ++++ +LP+ NP G++ H R R
Sbjct: 84 WGXLHFL-------RGLQPALFERVNLSLLPLVNPTGFKAGHRFNRFGENPNR 129
>pdb|1PBA|A Chain A, The Nmr Structure Of The Activation Domain Isolated From
Porcine Procarboxypeptidase B
Length = 81
Score = 32.0 bits (71), Expect = 0.80, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 133 SNIDIMVKADKVAAVKQYLEKAKLTYEVILED 164
S +D VKA+ + AV+ +LE+ +L YEV++ +
Sbjct: 50 STVDFRVKAEDILAVEDFLEQNELQYEVLINN 81
>pdb|1PYT|A Chain A, Ternary Complex Of Procarboxypeptidase A, Proproteinase E,
And Chymotrypsinogen C
Length = 94
Score = 30.4 bits (67), Expect = 2.0, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 129 GGSTSNIDIMVKADKVAAVKQYLEKAKLTYEVILEDVQ 166
G S ID+ V + AVK +LE + Y +++EDVQ
Sbjct: 41 GQPGSPIDVRVPFPSLQAVKVFLEAHGIRYRIMIEDVQ 78
>pdb|1BML|C Chain C, Complex Of The Catalytic Domain Of Human Plasmin And
Streptokinase
pdb|1BML|D Chain D, Complex Of The Catalytic Domain Of Human Plasmin And
Streptokinase
Length = 362
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 227 LEGRPLRLVKISSGV-PNAKAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKI 285
L RP K G+ P +K F D G + + I +L+ N + +DY + I
Sbjct: 31 LTSRPAHGGKTEQGLSPKSKPFATDSGAMPHKLEKADLLKAIQEQLIANVHSNDDYFEVI 90
Query: 286 DF 287
DF
Sbjct: 91 DF 92
>pdb|1SB8|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa
Udp-N-Acetylglucosamine 4- Epimerase Complexed With
Udp-N-Acetylgalactosamine
pdb|1SB9|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa
Udp-N-Acetylglucosamine 4- Epimerase Complexed With
Udp-Glucose
Length = 352
Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 22 VNGEGRTPRDVCKHNDEARKLLLAAEKTEGIQREHKFLNAARANDLESLNSL 73
+NG+G T RD C + + LLAA T G+ ++ N A SLN L
Sbjct: 237 INGDGETSRDFCYIENTVQANLLAA--TAGLDARNQVYNIA-VGGRTSLNQL 285
>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And
The Myosin Phosphatase Targeting Subunit 1 (mypt1)
Length = 299
Score = 28.1 bits (61), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 7 DIVCLLVSKNANINIVNGEGRTPRDV 32
DI L+S+ A++ VN EG TP D+
Sbjct: 120 DIAEYLISQGAHVGAVNSEGDTPLDI 145
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,274,739
Number of Sequences: 62578
Number of extensions: 560420
Number of successful extensions: 1778
Number of sequences better than 100.0: 65
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1605
Number of HSP's gapped (non-prelim): 84
length of query: 444
length of database: 14,973,337
effective HSP length: 102
effective length of query: 342
effective length of database: 8,590,381
effective search space: 2937910302
effective search space used: 2937910302
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)