Query psy15737
Match_columns 444
No_of_seqs 273 out of 1720
Neff 6.5
Searched_HMMs 46136
Date Fri Aug 16 20:06:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15737.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15737hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2650|consensus 100.0 1.6E-87 3.6E-92 687.6 31.4 325 98-444 21-358 (418)
2 cd03872 M14_CPA6 Carboxypeptid 100.0 3.7E-67 8E-72 522.2 24.9 233 196-444 1-237 (300)
3 cd06247 M14_CPO Peptidase M14 100.0 8.9E-67 1.9E-71 519.3 25.8 234 194-443 1-238 (298)
4 cd03871 M14_CPB Peptidase M14 100.0 8E-67 1.7E-71 520.3 25.4 236 192-443 1-239 (300)
5 cd03870 M14_CPA Peptidase M14 100.0 7.2E-66 1.6E-70 514.0 25.0 235 192-443 1-238 (301)
6 cd06246 M14_CPB2 Peptidase M14 100.0 1.2E-65 2.6E-70 512.4 25.6 234 194-443 2-239 (300)
7 cd06248 M14_CPA_CPB_like Pepti 100.0 2.3E-62 4.9E-67 490.2 24.8 234 194-443 1-243 (304)
8 cd03860 M14_CP_A-B_like The Pe 100.0 4.7E-57 1E-61 450.3 25.9 231 197-443 1-233 (294)
9 cd03859 M14_CPT Peptidase M14- 100.0 3.2E-56 6.9E-61 444.5 24.8 219 195-429 2-234 (295)
10 cd06228 Peptidase_M14-like_3 A 100.0 8.9E-57 1.9E-61 450.9 20.1 205 222-443 5-269 (332)
11 cd06905 Peptidase_M14-like_8 A 100.0 7.3E-56 1.6E-60 450.5 22.8 240 194-442 1-312 (360)
12 cd06227 Peptidase_M14-like_2 A 100.0 2.4E-54 5.3E-59 425.2 22.8 215 197-444 2-228 (272)
13 smart00631 Zn_pept Zn_pept. 100.0 5E-53 1.1E-57 417.9 24.9 225 197-443 1-230 (277)
14 cd03867 M14_CPZ Peptidase M14- 100.0 3.8E-52 8.2E-57 429.8 20.1 222 197-443 1-258 (395)
15 cd06226 M14_CPT_like Peptidase 100.0 9.6E-52 2.1E-56 410.6 21.5 198 214-427 1-230 (293)
16 cd03868 M14_CPD_I The first ca 100.0 4.3E-50 9.4E-55 412.2 21.2 212 197-442 1-236 (372)
17 cd03858 M14_CP_N-E_like Carbox 100.0 4.7E-50 1E-54 412.3 21.4 213 197-441 1-237 (374)
18 cd06245 M14_CPD_III The third 100.0 6.7E-50 1.4E-54 408.3 21.7 205 196-437 1-212 (363)
19 cd03869 M14_CPX_like Peptidase 100.0 1.6E-49 3.4E-54 407.9 22.1 215 196-433 4-250 (405)
20 cd03863 M14_CPD_II The second 100.0 3.9E-49 8.5E-54 403.7 21.2 201 196-433 5-218 (375)
21 cd03866 M14_CPM Peptidase M14 100.0 5.2E-48 1.1E-52 396.3 20.9 207 196-440 4-233 (376)
22 PF00246 Peptidase_M14: Zinc c 100.0 2.8E-47 6E-52 376.4 19.1 215 203-440 1-224 (279)
23 cd06229 M14_Endopeptidase_I Pe 100.0 1.7E-46 3.7E-51 367.2 18.1 187 226-443 1-207 (255)
24 cd03864 M14_CPN Peptidase M14 100.0 4.5E-42 9.8E-47 353.3 21.7 214 197-433 1-242 (392)
25 cd03865 M14_CPE_H Peptidase M1 100.0 3.4E-41 7.4E-46 346.4 21.1 215 196-433 4-245 (402)
26 cd03862 Peptidase_M14-like_7 A 100.0 9.3E-40 2E-44 321.7 19.4 183 228-443 8-205 (273)
27 cd06237 M14_Nna1_like_3 A bact 100.0 1.8E-38 3.9E-43 308.3 19.6 188 197-443 7-197 (244)
28 cd06234 M14_Nna1_like_1 A bact 100.0 4.2E-38 9.1E-43 308.2 20.5 190 192-435 5-198 (263)
29 cd06908 M14_AGBL4_like Peptida 100.0 5.9E-38 1.3E-42 306.7 18.3 175 207-428 1-185 (261)
30 cd03856 M14_Nna1_like Peptidas 100.0 1.2E-36 2.7E-41 299.5 16.8 194 197-443 10-211 (269)
31 cd06238 Peptidase_M14-like_1_1 100.0 5.3E-36 1.2E-40 294.7 14.8 183 223-444 1-229 (271)
32 cd06242 Peptidase_M14-like_1_5 100.0 7.4E-34 1.6E-38 279.6 19.9 182 197-432 2-205 (268)
33 PRK10602 murein peptide amidas 100.0 2E-32 4.4E-37 264.2 13.3 157 218-429 15-179 (237)
34 cd06241 Peptidase_M14-like_1_4 100.0 4E-31 8.6E-36 260.0 18.2 164 205-410 1-173 (266)
35 cd06235 M14_Nna1_like_2 Subgro 100.0 1.3E-30 2.8E-35 255.5 16.6 153 214-413 9-170 (258)
36 cd06239 Peptidase_M14-like_1_2 100.0 4.6E-30 9.9E-35 247.2 18.5 141 210-408 2-143 (231)
37 cd06236 M14_AGBL5_like Peptida 100.0 2.5E-30 5.5E-35 256.9 16.6 147 217-410 15-190 (304)
38 cd06907 M14_AGBL2-3_like Pepti 100.0 1E-29 2.2E-34 247.6 15.5 152 215-413 11-171 (261)
39 cd06243 Peptidase_M14-like_1_6 100.0 1.1E-28 2.4E-33 238.4 17.3 122 223-397 1-130 (236)
40 KOG2649|consensus 100.0 5E-28 1.1E-32 247.6 18.2 212 196-433 68-300 (500)
41 cd06244 Peptidase_M14-like_1_7 99.9 2.9E-27 6.4E-32 230.8 17.4 158 223-433 1-206 (268)
42 cd00596 Peptidase_M14_like The 99.9 3E-27 6.6E-32 221.6 13.9 138 247-430 1-138 (196)
43 cd03857 Peptidase_M14-like_1 P 99.9 7.9E-27 1.7E-31 224.7 16.3 129 223-404 1-140 (226)
44 cd06240 Peptidase_M14-like_1_3 99.9 2.7E-25 5.9E-30 218.6 15.6 180 219-432 1-220 (273)
45 cd06904 M14_MpaA_like Peptidas 99.9 1.2E-25 2.6E-30 208.9 10.5 117 247-404 1-117 (178)
46 cd06906 M14_Nna1 Peptidase M14 99.9 2.4E-24 5.2E-29 211.0 13.6 147 207-399 4-163 (278)
47 cd06232 Peptidase_M14-like_5 P 99.9 2.8E-24 6E-29 204.4 11.4 139 199-398 3-144 (240)
48 cd06231 Peptidase_M14-like_4 A 99.9 3.6E-23 7.7E-28 200.3 13.9 127 217-399 14-141 (236)
49 KOG3641|consensus 99.4 3.4E-13 7.3E-18 140.6 10.6 172 192-410 374-553 (650)
50 cd06250 M14_PaAOTO_like An unc 99.4 5E-13 1.1E-17 137.2 11.8 75 222-300 4-80 (359)
51 PF02244 Propep_M14: Carboxype 99.4 7.4E-13 1.6E-17 105.5 7.5 65 108-172 1-73 (74)
52 COG2866 Predicted carboxypepti 99.4 3.8E-13 8.2E-18 138.5 5.2 185 217-434 120-315 (374)
53 cd06233 Peptidase_M14-like_6 P 99.3 5.3E-11 1.1E-15 118.0 16.1 169 199-409 4-225 (283)
54 cd06254 M14_ASTE_ASPA_like_4 A 99.3 1.3E-11 2.9E-16 123.1 9.8 123 230-408 4-128 (288)
55 cd06255 M14_ASTE_ASPA_like_5 A 99.3 2.5E-11 5.5E-16 121.4 11.3 123 223-401 2-126 (293)
56 cd06251 M14_ASTE_ASPA_like_1 A 99.2 3.3E-11 7.1E-16 120.3 8.9 120 232-408 9-129 (287)
57 cd06230 M14_ASTE_ASPA_like The 99.2 3.9E-11 8.5E-16 117.4 9.2 105 247-408 1-105 (252)
58 cd06252 M14_ASTE_ASPA_like_2 A 99.1 4.8E-10 1E-14 113.4 11.0 121 229-407 21-143 (316)
59 cd06253 M14_ASTE_ASPA_like_3 A 99.1 5.5E-10 1.2E-14 112.1 10.5 123 231-406 9-132 (298)
60 TIGR02994 ectoine_eutE ectoine 99.0 1.5E-09 3.3E-14 110.1 11.0 121 230-408 35-157 (325)
61 PF04952 AstE_AspA: Succinylgl 98.9 6.6E-10 1.4E-14 110.5 5.0 110 245-401 3-113 (292)
62 PRK02259 aspartoacylase; Provi 98.8 1.9E-08 4.1E-13 100.6 8.4 102 245-399 3-108 (288)
63 COG3608 Predicted deacylase [G 98.7 1.3E-07 2.9E-12 95.2 12.6 115 233-405 39-155 (331)
64 PRK05324 succinylglutamate des 98.7 9.6E-08 2.1E-12 97.2 10.6 59 236-300 39-97 (329)
65 cd03855 M14_ASTE Peptidase M14 98.6 1.2E-07 2.6E-12 96.3 10.0 60 235-300 33-92 (322)
66 cd06909 M14_ASPA Aspartoacylas 98.6 1.4E-07 3.1E-12 94.0 7.6 100 245-397 1-104 (282)
67 PF10994 DUF2817: Protein of u 98.5 7.4E-06 1.6E-10 83.7 17.8 180 199-421 4-241 (341)
68 cd06256 M14_ASTE_ASPA_like_6 A 98.5 3.8E-07 8.2E-12 92.8 8.3 56 235-300 27-82 (327)
69 cd06910 M14_ASTE_ASPA_like_7 A 98.5 1.8E-07 3.9E-12 92.8 5.7 113 245-408 1-113 (272)
70 TIGR03242 arg_catab_astE succi 98.3 1.9E-06 4.2E-11 87.4 9.4 52 242-299 39-90 (319)
71 COG2988 Succinylglutamate desu 97.6 0.00017 3.6E-09 71.2 7.6 148 209-407 8-164 (324)
72 PF13857 Ank_5: Ankyrin repeat 97.5 4.4E-05 9.4E-10 57.4 1.3 31 3-33 26-56 (56)
73 PF09892 DUF2119: Uncharacteri 97.0 0.0019 4.1E-08 60.2 6.8 82 245-399 7-88 (193)
74 PF13637 Ank_4: Ankyrin repeat 95.9 0.0037 8E-08 46.2 1.5 31 3-33 11-41 (54)
75 KOG0514|consensus 95.8 0.0053 1.1E-07 62.6 2.4 33 1-33 348-380 (452)
76 KOG2505|consensus 95.6 0.022 4.8E-07 60.1 6.3 40 3-43 440-479 (591)
77 COG4073 Uncharacterized protei 95.4 0.03 6.4E-07 51.4 5.3 42 248-299 18-59 (198)
78 KOG4214|consensus 95.2 0.018 3.8E-07 48.4 3.0 39 4-43 78-116 (117)
79 PF00023 Ank: Ankyrin repeat H 94.3 0.031 6.8E-07 37.0 2.0 22 3-24 12-33 (33)
80 PF13606 Ank_3: Ankyrin repeat 94.1 0.02 4.4E-07 37.5 0.8 20 2-21 11-30 (30)
81 PHA02716 CPXV016; CPX019; EVM0 93.9 0.051 1.1E-06 61.4 3.9 74 6-81 227-309 (764)
82 KOG0505|consensus 93.0 0.1 2.2E-06 55.7 4.1 45 3-48 116-160 (527)
83 KOG4412|consensus 92.9 0.065 1.4E-06 50.2 2.2 30 2-31 115-144 (226)
84 PHA02859 ankyrin repeat protei 92.7 0.046 1E-06 51.9 1.0 30 4-33 101-130 (209)
85 PF12796 Ank_2: Ankyrin repeat 92.6 0.069 1.5E-06 42.8 1.8 31 3-33 36-66 (89)
86 PHA02791 ankyrin-like protein; 92.5 0.093 2E-06 52.6 3.0 73 3-75 71-149 (284)
87 PHA02874 ankyrin repeat protei 92.4 0.13 2.7E-06 54.1 3.9 73 5-77 267-345 (434)
88 PLN03192 Voltage-dependent pot 91.8 0.11 2.3E-06 59.5 2.8 74 2-75 567-643 (823)
89 PHA02730 ankyrin-like protein; 91.4 0.15 3.2E-06 56.8 3.3 70 4-74 55-136 (672)
90 KOG0505|consensus 91.4 0.21 4.6E-06 53.3 4.2 38 4-43 242-279 (527)
91 PHA02878 ankyrin repeat protei 91.3 0.19 4.2E-06 53.4 3.9 73 3-75 47-122 (477)
92 KOG0509|consensus 90.8 0.12 2.7E-06 56.0 1.9 29 5-33 124-152 (600)
93 PHA02741 hypothetical protein; 90.5 0.27 5.8E-06 44.8 3.6 70 6-75 77-153 (169)
94 PHA02795 ankyrin-like protein; 90.4 0.17 3.6E-06 53.8 2.4 64 3-66 198-266 (437)
95 PHA03095 ankyrin-like protein; 90.3 0.15 3.3E-06 53.5 2.0 31 3-33 267-297 (471)
96 PHA02798 ankyrin-like protein; 90.2 0.14 3E-06 54.7 1.7 30 4-33 269-298 (489)
97 PHA02876 ankyrin repeat protei 88.9 0.29 6.2E-06 54.5 2.9 30 4-33 156-185 (682)
98 PHA02875 ankyrin repeat protei 88.6 0.27 5.8E-06 51.0 2.3 73 3-75 112-189 (413)
99 PHA02791 ankyrin-like protein; 88.4 0.41 8.9E-06 48.0 3.4 72 3-76 138-216 (284)
100 PHA02875 ankyrin repeat protei 88.3 0.37 8E-06 50.0 3.1 74 3-76 12-90 (413)
101 PHA02859 ankyrin repeat protei 88.3 0.43 9.3E-06 45.2 3.2 30 3-32 135-164 (209)
102 KOG0195|consensus 88.0 0.26 5.6E-06 49.2 1.6 32 2-33 76-107 (448)
103 PHA02743 Viral ankyrin protein 87.9 0.27 5.7E-06 44.9 1.5 65 7-71 74-145 (166)
104 KOG0507|consensus 87.6 0.27 5.8E-06 54.6 1.5 32 2-33 124-155 (854)
105 PHA02989 ankyrin repeat protei 87.5 0.3 6.4E-06 52.3 1.8 29 5-33 268-296 (494)
106 PHA03100 ankyrin repeat protei 87.3 0.32 6.9E-06 51.3 1.9 38 6-43 230-269 (480)
107 PHA02878 ankyrin repeat protei 87.1 0.32 7E-06 51.7 1.8 30 4-33 278-307 (477)
108 PHA02946 ankyin-like protein; 86.8 0.36 7.8E-06 51.3 2.0 73 3-75 82-161 (446)
109 KOG4412|consensus 86.6 0.48 1E-05 44.5 2.4 69 2-71 81-156 (226)
110 PHA02989 ankyrin repeat protei 86.2 0.43 9.4E-06 51.0 2.2 30 3-32 85-114 (494)
111 PHA02884 ankyrin repeat protei 86.1 0.4 8.7E-06 48.5 1.8 41 3-43 80-123 (300)
112 PHA02730 ankyrin-like protein; 85.9 0.63 1.4E-05 51.9 3.3 30 3-32 212-241 (672)
113 PHA02798 ankyrin-like protein; 85.0 0.59 1.3E-05 49.9 2.5 30 3-32 48-77 (489)
114 PHA02716 CPXV016; CPX019; EVM0 84.8 1.2 2.5E-05 50.7 4.8 28 7-34 516-543 (764)
115 PHA02884 ankyrin repeat protei 84.3 0.67 1.5E-05 46.9 2.4 74 3-76 43-126 (300)
116 KOG0818|consensus 82.6 0.57 1.2E-05 49.8 1.2 30 7-37 181-210 (669)
117 PHA02917 ankyrin-like protein; 82.5 0.96 2.1E-05 50.6 3.0 72 4-75 46-124 (661)
118 PTZ00322 6-phosphofructo-2-kin 82.1 0.73 1.6E-05 51.5 1.9 31 3-33 125-155 (664)
119 KOG0195|consensus 82.1 1.7 3.8E-05 43.5 4.2 44 4-48 111-154 (448)
120 PHA02736 Viral ankyrin protein 81.4 0.89 1.9E-05 40.4 1.8 69 6-74 71-146 (154)
121 PHA02874 ankyrin repeat protei 81.1 1 2.2E-05 47.3 2.4 74 3-76 134-212 (434)
122 PHA02795 ankyrin-like protein; 80.6 0.95 2.1E-05 48.1 1.9 73 3-75 159-242 (437)
123 PHA02917 ankyrin-like protein; 80.4 0.93 2E-05 50.7 1.9 30 4-33 207-236 (661)
124 PHA03100 ankyrin repeat protei 80.3 1.2 2.7E-05 46.9 2.7 30 4-33 84-113 (480)
125 PHA02876 ankyrin repeat protei 79.5 0.96 2.1E-05 50.4 1.7 41 4-44 420-463 (682)
126 PHA02736 Viral ankyrin protein 79.5 1.1 2.4E-05 39.9 1.7 27 7-33 106-133 (154)
127 PHA02946 ankyin-like protein; 79.5 1.1 2.4E-05 47.7 2.0 26 5-30 152-177 (446)
128 PHA03095 ankyrin-like protein; 79.3 1.1 2.5E-05 46.9 2.1 27 4-30 25-51 (471)
129 PHA02792 ankyrin-like protein; 79.0 1.1 2.4E-05 49.7 1.9 30 4-33 421-450 (631)
130 KOG0508|consensus 77.0 1.6 3.5E-05 46.4 2.3 72 3-75 127-204 (615)
131 PHA02741 hypothetical protein; 76.8 1.5 3.1E-05 40.0 1.8 18 14-31 48-65 (169)
132 KOG0508|consensus 76.4 2.4 5.3E-05 45.1 3.4 40 4-43 161-202 (615)
133 PHA02792 ankyrin-like protein; 76.3 2.6 5.6E-05 46.9 3.8 41 3-43 82-125 (631)
134 KOG3676|consensus 74.7 1.8 3.9E-05 48.6 2.1 73 4-77 251-331 (782)
135 COG0666 Arp FOG: Ankyrin repea 74.4 2.8 6E-05 37.8 3.0 30 4-33 122-154 (235)
136 KOG0522|consensus 74.4 5.1 0.00011 43.2 5.2 40 3-42 65-106 (560)
137 KOG4177|consensus 73.6 1.8 3.9E-05 50.9 1.8 32 2-33 582-613 (1143)
138 PLN03192 Voltage-dependent pot 73.4 1.8 4E-05 49.5 1.8 31 3-33 632-662 (823)
139 KOG0515|consensus 73.0 2.2 4.9E-05 45.9 2.2 31 3-33 593-623 (752)
140 KOG0514|consensus 72.9 3 6.4E-05 43.2 2.9 44 2-46 382-429 (452)
141 KOG1710|consensus 71.9 1.5 3.3E-05 43.9 0.6 126 3-145 55-185 (396)
142 KOG4177|consensus 71.7 3.5 7.5E-05 48.6 3.5 68 3-76 130-197 (1143)
143 PHA02743 Viral ankyrin protein 70.9 2.4 5.2E-05 38.6 1.6 26 6-31 37-62 (166)
144 TIGR00870 trp transient-recept 68.6 4.2 9.1E-05 45.9 3.3 30 4-33 186-215 (743)
145 COG0666 Arp FOG: Ankyrin repea 67.5 3.6 7.9E-05 37.1 2.1 34 3-36 157-190 (235)
146 KOG0512|consensus 67.5 3.6 7.8E-05 38.6 2.0 30 4-33 108-137 (228)
147 KOG0510|consensus 67.0 3.7 8.1E-05 46.4 2.4 32 2-33 282-313 (929)
148 KOG0502|consensus 66.5 3.3 7.1E-05 40.2 1.6 29 5-33 238-266 (296)
149 PF13857 Ank_5: Ankyrin repeat 64.9 2.2 4.7E-05 31.6 0.1 22 12-33 1-23 (56)
150 PF12997 DUF3881: Domain of un 64.0 6.2 0.00013 39.5 3.0 51 19-75 137-187 (283)
151 smart00248 ANK ankyrin repeats 59.7 6.9 0.00015 22.4 1.7 18 3-20 12-29 (30)
152 PF01397 Terpene_synth: Terpen 58.6 13 0.00027 35.1 4.0 64 10-76 98-167 (183)
153 KOG0512|consensus 56.7 6 0.00013 37.1 1.4 33 6-38 143-175 (228)
154 PTZ00322 6-phosphofructo-2-kin 54.8 7.1 0.00015 43.8 1.9 73 3-75 92-169 (664)
155 cd00204 ANK ankyrin repeats; 52.0 9.7 0.00021 30.8 1.9 28 4-31 51-78 (126)
156 cd00204 ANK ankyrin repeats; 48.1 12 0.00025 30.3 1.8 73 3-76 17-95 (126)
157 KOG0502|consensus 48.0 25 0.00054 34.3 4.1 83 3-87 170-257 (296)
158 KOG1710|consensus 47.1 17 0.00038 36.7 3.0 31 3-33 89-119 (396)
159 KOG0507|consensus 43.7 8.9 0.00019 43.1 0.5 33 3-36 231-263 (854)
160 KOG0510|consensus 38.6 25 0.00054 40.1 2.9 32 4-36 99-130 (929)
161 KOG0509|consensus 33.5 14 0.00031 40.6 0.0 27 7-33 226-252 (600)
162 TIGR00870 trp transient-recept 33.5 29 0.00062 39.2 2.5 66 3-70 27-97 (743)
163 PF12796 Ank_2: Ankyrin repeat 33.4 23 0.0005 27.9 1.3 69 2-74 6-79 (89)
164 KOG4214|consensus 31.9 19 0.00041 30.6 0.5 27 4-30 45-71 (117)
165 COG3931 Predicted N-formylglut 31.7 1.1E+02 0.0023 30.2 5.6 82 341-431 86-186 (263)
166 PF05194 UreE_C: UreE urease a 31.3 2.3E+02 0.005 22.9 6.9 53 106-162 3-59 (87)
167 PRK10076 pyruvate formate lyas 30.9 1.9E+02 0.0041 27.7 7.3 66 370-440 143-212 (213)
168 KOG4369|consensus 30.4 36 0.00078 40.4 2.5 42 2-43 833-876 (2131)
169 KOG0511|consensus 30.3 59 0.0013 34.1 3.8 43 4-47 80-122 (516)
170 KOG0783|consensus 28.5 37 0.0008 39.0 2.2 29 2-30 61-90 (1267)
171 KOG4369|consensus 27.0 30 0.00065 41.1 1.2 73 3-75 767-845 (2131)
172 KOG0783|consensus 27.0 41 0.0009 38.6 2.2 29 4-32 97-125 (1267)
173 cd01304 FMDH_A Formylmethanofu 25.3 6.1E+02 0.013 28.1 10.7 58 372-442 241-304 (541)
174 TIGR02017 hutG_amidohyd N-form 24.3 1.8E+02 0.0039 28.8 6.0 41 360-400 98-152 (263)
175 PF03460 NIR_SIR_ferr: Nitrite 23.4 3.2E+02 0.0069 20.6 6.1 48 106-153 10-68 (69)
176 PHA02046 hypothetical protein 23.1 1.4E+02 0.0029 25.2 4.0 46 25-71 49-97 (99)
177 cd04906 ACT_ThrD-I_1 First of 22.7 2.7E+02 0.0058 22.2 5.8 58 106-164 2-75 (85)
178 PRK13986 urease subunit alpha; 22.5 2.2E+02 0.0048 27.6 5.9 67 37-111 6-97 (225)
179 PF06441 EHN: Epoxide hydrolas 22.4 2E+02 0.0044 24.7 5.3 27 134-160 2-28 (112)
180 KOG4552|consensus 22.3 84 0.0018 30.2 3.0 70 5-74 24-94 (272)
181 PRK13242 ureA urease subunit g 22.1 3E+02 0.0065 23.4 5.9 67 37-111 6-96 (100)
182 COG3407 MVD1 Mevalonate pyroph 21.9 6E+02 0.013 26.2 9.3 97 43-155 205-308 (329)
No 1
>KOG2650|consensus
Probab=100.00 E-value=1.6e-87 Score=687.62 Aligned_cols=325 Identities=45% Similarity=0.855 Sum_probs=302.5
Q ss_pred cccccCCcEEEEEEcCCHHHHHHHHHHHHh------cCCCC--CeEEEEEcCccHHHHHHHHHhcCcceEEEeccHHHHh
Q psy15737 98 EFKYLDGAKVLTSHISPAAFNLYFSDVVEK------WGGST--SNIDIMVKADKVAAVKQYLEKAKLTYEVILEDVQRAI 169 (444)
Q Consensus 98 ~~~Y~~g~kV~rv~~~~~~q~~~L~~l~~~------W~~~~--~~vdV~V~p~~~~~~~~~L~~~~i~~~v~i~dvq~~i 169 (444)
+.+| ++||||||.|++++|++.|++|... |++++ .++||||+|+.++.|+++|+..+|+|+|+|+|||++|
T Consensus 21 ~~~y-~~~~v~r~~~~~~~q~~~l~~l~~~~~~~~fw~~~~~~~~~di~V~~~~~~~~~~~L~~~~i~~~v~i~d~q~~i 99 (418)
T KOG2650|consen 21 RERY-DGYQVYRVTPETEEQVEALRKLEEQEDELDFWKEPSLVQPVDILVPPEDLAAFKAFLKSANISYEVLIEDLQKLI 99 (418)
T ss_pred cccC-CcceEEEEecCcHHHHHHHHHHHhccceeeeeccCCcCCCceEEECHHHHHHHHHHHHhcCCceEEEhhhHHHHH
Confidence 6888 9999999999999999999999543 99886 6899999999999999999999999999999999999
Q ss_pred hhcCCcchHHHHHHHhcCCCCccccccCCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecC-CCCCceEE
Q psy15737 170 NEENPEISEEELAVLTGRKGHRMTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSG-VPNAKAFW 248 (444)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~-~~~kp~v~ 248 (444)
+++..+. ....+....|+|..||++++|++||+.|+.+||++|+++.||+|+|||+|.+++|+.+ ..+||+||
T Consensus 100 ~~~~~~~------~~~~~~~~~~~~~~Y~~le~I~~~l~~l~~~~P~~v~~~~IG~s~EgR~i~~lkIs~~~~~~k~~I~ 173 (418)
T KOG2650|consen 100 DEERVEV------RLRNRRSNDFNWERYHSLEEIYEWLDNLAERYPDLVSLIHIGRSYEGRPLKVLKISGGDNRNKKAIF 173 (418)
T ss_pred HHHhhhc------cccccccccccHHHhcCHHHHHHHHHHHHHhCCCceEEEEcccccCCceEEEEEecCCCCCCCceEE
Confidence 9986522 1122333469999999999999999999999999999999999999999999999987 67899999
Q ss_pred EeccccCCCCccHHHHHHHHHHHHHhchhcH---HhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCcccc
Q psy15737 249 IDGGIHAREWITPATVSFILSELVENREAQE---DYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGID 325 (444)
Q Consensus 249 i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~---~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD 325 (444)
|+|||||||||||++|+|+|++|+..|+.++ ++|++++|||+||+|||||+|+|++||||||||+++.....|.|||
T Consensus 174 id~GiHAREWIspAta~~~i~qLv~~y~~~~~~~~ll~~~dwyI~Pv~NPDGYeYS~t~~R~WRKnRs~~~~~~~C~GvD 253 (418)
T KOG2650|consen 174 IDAGIHAREWISPATALWFINQLVSSYGRDPAVTKLLDKLDWYILPVVNPDGYEYSRTTDRLWRKNRSPNGCASRCIGVD 253 (418)
T ss_pred EecchhHHhhccHHHHHHHHHHHHhhhccCHHHHHHHhcCcEEEEeeecCCcceeeecccccccccCCCCCCCCeeeCCC
Confidence 9999999999999999999999999998876 6999999999999999999999999999999999985224699999
Q ss_pred CCCCCCCccccCCCCCCCCCCCCCCC-CCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCccccc
Q psy15737 326 LVTYDSDEEDEKTIDLNRNWGFHWGG-VGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYP 404 (444)
Q Consensus 326 ~~~~d~~~~~~~gvDLNRNf~~~W~~-~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP 404 (444)
|||||+++|++ .|+|++||+++|+|++|||||||+||.+|+.....++.+||+||||||+|+||
T Consensus 254 ---------------lNRNfd~~W~~~~Gas~~PCse~Y~G~~pfSEpEt~av~~fi~~~~~~i~~yislHSYsQ~llyP 318 (418)
T KOG2650|consen 254 ---------------LNRNFDFHWGGGKGASSDPCSETYAGPSPFSEPETRAVRDFITSFENNIKAYISLHSYSQLLLYP 318 (418)
T ss_pred ---------------CCCCccCcCCCCCCCCCCCCccccCCCCCCCcHHHHHHHHHHHhcCcceEEEEEecccceeEEec
Confidence 99999999999 69999999999999999999999999999999876799999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCeeeeecccC
Q psy15737 405 WGYNKKVPPDYADLDRVGRAAAEAMRVAGGGAYTFVLMIK 444 (444)
Q Consensus 405 ~g~~~~~~~d~~~l~~la~~~a~ai~~~~g~~Y~~g~~~~ 444 (444)
|||+...++|+++|.++|+.+++||++++|+.|++|++++
T Consensus 319 yg~~~~~~~~~~dl~~va~~a~~ai~~~~gt~Y~~G~~~~ 358 (418)
T KOG2650|consen 319 YGYTNDLPEDYEDLQEVARAAADALKSVYGTKYTVGSSAD 358 (418)
T ss_pred ccccCCCCCCHHHHHHHHHHHHHHHHHHhCCEEEeccccc
Confidence 9999999999999999999999999999999999998864
No 2
>cd03872 M14_CPA6 Carboxypeptidase (CP) A6 (CPA6, also known as CPAH; EC 3.4.17.1), belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA6 prefers large hydrophobic C-terminal amino acids as well as histidine, while peptides with a penultimate glycine or proline are very poorly cleaved. Several neuropeptides are processed by CPA6, including Met- and Leu-enkephalin, angiotensin I, and neurotensin. CPA6 converts enkephalin and neurotensin into forms known to be inactive toward their receptors, but converts inactive angiotensin I into the biologically active angiotensin II. Thus, CPA6 plays a possible role in the regulation of neuropeptides in the extracellular environment within the olfactory bulb where it is highly expresse
Probab=100.00 E-value=3.7e-67 Score=522.17 Aligned_cols=233 Identities=36% Similarity=0.747 Sum_probs=221.3
Q ss_pred cCCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCC-CCCceEEEeccccCCCCccHHHHHHHHHHHHHh
Q psy15737 196 KYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV-PNAKAFWIDGGIHAREWITPATVSFILSELVEN 274 (444)
Q Consensus 196 ~Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~-~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~ 274 (444)
.||+++||++||+.|+++||++|++++||+|+|||+|++++|+++. ..||+|||+||||||||+|++++++||++|+.+
T Consensus 1 ~Y~~~~ei~~~l~~L~~~~p~~v~l~~iG~S~EGR~i~~l~i~~~~~~~k~~i~i~~giHarEwi~~~~~~~~i~~Ll~~ 80 (300)
T cd03872 1 VYHPLEEIESWMFYMNKTHSDLVHLFSIGKSYEGRSLYVLKLGKRTRSYKKAVWIDCGIHAREWIGPAFCQWFVKEALNS 80 (300)
T ss_pred CCCCHHHHHHHHHHHHHHCCCceEEEEeeecCCCCceEEEEEecCCCCCCCeEEEecccccccccCHHHHHHHHHHHHHh
Confidence 3999999999999999999999999999999999999999999765 379999999999999999999999999999998
Q ss_pred chhc---HHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCC
Q psy15737 275 REAQ---EDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGG 351 (444)
Q Consensus 275 ~~~~---~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~ 351 (444)
+..+ ..+|++++|+|||++|||||+|+++++|||||||+++. +.+|.||| |||||+++|+.
T Consensus 81 ~~~d~~~~~lL~~~~~~ivP~vNPDGy~ys~~~~r~wrknR~~~~-~~~c~GVD---------------LNRNf~~~w~~ 144 (300)
T cd03872 81 YQTDPAMKKMLNQLYFYVMPVFNVDGYHYSWTNDRFWRKTRSKNS-RYQCRGVD---------------ANRNWKVKWCD 144 (300)
T ss_pred ccCChHHHHHHhhCeEEEEeeecCCcceeeeccchhhhccCCCCC-CCCccccc---------------cccccCcccCC
Confidence 7554 35899999999999999999999999999999999875 67899999 99999999999
Q ss_pred CCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q psy15737 352 VGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEAMRV 431 (444)
Q Consensus 352 ~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~~~~~~d~~~l~~la~~~a~ai~~ 431 (444)
.|+|.+||+++|+|+.|||||||+||++|+.++.+++.+|||||||||+|+|||||+...++|.++++.+|..+++||++
T Consensus 145 ~g~s~~Pcs~~Y~G~~pfSEpEt~al~~~~~~~~~~i~~~ls~Hsyg~~i~~P~g~~~~~~~~~~~~~~~~~~~~~ai~~ 224 (300)
T cd03872 145 EGASLHPCDDTYCGPFPESEPEVKAVAQFLRKHRKHVRAYLSFHAYAQMLLYPYSYKYATIPNFGCVESAAYNAVNALQS 224 (300)
T ss_pred CCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCccceEEEEEccCCcEEEecCCCcCCCCCChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999877899999999999999999999998899999999999999999999
Q ss_pred hcCCeeeeecccC
Q psy15737 432 AGGGAYTFVLMIK 444 (444)
Q Consensus 432 ~~g~~Y~~g~~~~ 444 (444)
++|+.|++|++++
T Consensus 225 ~~~~~Y~~g~~~~ 237 (300)
T cd03872 225 AYGVRYRYGPASS 237 (300)
T ss_pred hhCCCCcccCccc
Confidence 9999999999863
No 3
>cd06247 M14_CPO Peptidase M14 carboxypeptidase (CP) O (CPO, also known as metallocarboxypeptidase C; EC 3.4.17.) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPO has not been well characterized as yet, and little is known about it. Based on modeling studies, CPO has been suggested to have specificity for acidic residues rather than aliphatic/aromatic residues as in A-like enzymes or basic residues as in B-like enzymes. It remains to be demonstrated that CPO is functional as an MCP.
Probab=100.00 E-value=8.9e-67 Score=519.29 Aligned_cols=234 Identities=40% Similarity=0.761 Sum_probs=222.6
Q ss_pred cccCCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecC-CCCCceEEEeccccCCCCccHHHHHHHHHHHH
Q psy15737 194 FHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSG-VPNAKAFWIDGGIHAREWITPATVSFILSELV 272 (444)
Q Consensus 194 ~~~Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~-~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~ 272 (444)
|+.||+++||.+||+.|+++||+++++++||+|+|||+|++|+||++ ...||+|||+||||||||+|+++++++|++|+
T Consensus 1 ~~~Y~~~~ei~~~l~~L~~~~p~~v~l~~iG~S~EgR~I~~l~i~~~~~~~k~~i~i~~giHarEwi~~~~~l~~i~~Ll 80 (298)
T cd06247 1 YTKYHPMDEIYNWMDQIKEKYSELVSQHYLGCTYELRPMYYLKIGWPSDKPKKIIWMDCGIHAREWISPAFCQWFVKEIL 80 (298)
T ss_pred CCCcCCHHHHHHHHHHHHHHCCCcEEEEeceECcCCceEEEEEeecCCCCCCcEEEEeccccccccccHHHHHHHHHHHH
Confidence 67999999999999999999999999999999999999999999964 34679999999999999999999999999999
Q ss_pred Hhchhc---HHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCC
Q psy15737 273 ENREAQ---EDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHW 349 (444)
Q Consensus 273 ~~~~~~---~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W 349 (444)
+++..+ .++|++++|+|||++|||||+|+++++|+|||||+++. ..+|.||| |||||+++|
T Consensus 81 ~~y~~d~~~~~ll~~~~i~ivP~~NPDGy~ys~~~~r~wRknr~~~~-~~~c~GVD---------------LNRNf~~~w 144 (298)
T cd06247 81 QNYKTDPILRKVLKNVDFYVLPVLNIDGYIYTWTTDRLWRKNRSPHN-NGTCYGVD---------------LNRNFNSQW 144 (298)
T ss_pred HHhccCHHHHHHHhcCeEEEEeeecCCcceEEecccceecccCCCCC-CCCccccc---------------cccCCCCcc
Confidence 988655 45999999999999999999999999999999999875 67899999 999999999
Q ss_pred CCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHHH
Q psy15737 350 GGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEAM 429 (444)
Q Consensus 350 ~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~~~~~~d~~~l~~la~~~a~ai 429 (444)
+..|+|.+||+++|+|+.|||||||+||++|+.+.++++.+|||+||||++|+|||||+...++|.++++.+|..+++||
T Consensus 145 ~~~g~s~~p~~~~y~G~~pfSEpEt~ai~~~~~~~~~~i~~~l~~Hsyg~~i~~P~g~~~~~~~n~~~~~~~a~~~~~ai 224 (298)
T cd06247 145 CSIGASRNCRSNIFCGTGPESEPETKAVARLIESKKSDILCYLTIHSYGQLILLPYGYTKEPSSNHEEMMLVAQKAAAAL 224 (298)
T ss_pred ccCCCCCCCCCCCcCCCCCCCcHHHHHHHHHHHhcCcceEEEEEeccCCCeEEeCCcCCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998778899999999999999999999999999999999999999999
Q ss_pred HHhcCCeeeeeccc
Q psy15737 430 RVAGGGAYTFVLMI 443 (444)
Q Consensus 430 ~~~~g~~Y~~g~~~ 443 (444)
++++|+.|++|+++
T Consensus 225 ~~~~~~~y~~g~~~ 238 (298)
T cd06247 225 KEKHGTEYRVGSSA 238 (298)
T ss_pred HHhcCCCCccCCcc
Confidence 99999999999875
No 4
>cd03871 M14_CPB Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase B (PCPB) is produced by the exocrine pancreas and stored as stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. PCPB has been reported to be a good serum marker for the diagnosis of acute pancreatitis and graft rejection in pancreas transplant recipients.
Probab=100.00 E-value=8e-67 Score=520.33 Aligned_cols=236 Identities=39% Similarity=0.746 Sum_probs=225.4
Q ss_pred cccccCCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCCCCCceEEEeccccCCCCccHHHHHHHHHHH
Q psy15737 192 MTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAKAFWIDGGIHAREWITPATVSFILSEL 271 (444)
Q Consensus 192 ~~~~~Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L 271 (444)
|+|+.||+|+||.+||++|+++||+++++.+||+|+|||+|++++|+++...||+|||+||+|||||++++++++++++|
T Consensus 1 ~~~~~Y~~~~ei~~~l~~la~~~p~~v~~~~IG~S~eGR~i~~l~i~~~~~~kp~v~i~~giHarE~i~~~~~l~~i~~l 80 (300)
T cd03871 1 HSYEKYNNWETIEAWTEQVASENPDLISRSQIGTTFEGRPIYLLKVGKPGVNKPAIFMDCGFHAREWISPAFCQWFVREA 80 (300)
T ss_pred CCccccCCHHHHHHHHHHHHHHCCCceEEEEeeeCCCCCeeEEEEEccCCCCCCeEEEeccccccccccHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999877789999999999999999999999999999
Q ss_pred HHhchhc---HHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCC
Q psy15737 272 VENREAQ---EDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFH 348 (444)
Q Consensus 272 ~~~~~~~---~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~ 348 (444)
++.|+.+ ..+|++++|+|||++|||||+|+++.+|||||||+++. ...|.||| ||||||++
T Consensus 81 ~~~y~~d~~~~~lL~~~~~~ivP~~NPDG~~~s~~~~r~wrknr~~~~-~~~c~GVD---------------LNRNf~~~ 144 (300)
T cd03871 81 VRTYGREAIMTELLDKLDFYVLPVLNIDGYIYTWTKNRMWRKTRSTNA-GSSCIGTD---------------PNRNFNAG 144 (300)
T ss_pred HHHccCCHHHHHHHHcCeEEEEEeecCCcCeeeeccCHHHHHhcCCCC-CCCccccc---------------cCcCCCCc
Confidence 9988665 35999999999999999999999999999999999875 67899999 99999999
Q ss_pred CCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHH
Q psy15737 349 WGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEA 428 (444)
Q Consensus 349 W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~~~~~~d~~~l~~la~~~a~a 428 (444)
|+..|+|.+||+++|+|+.|||||||+||++|+.+...++.+||+|||||++|+|||+|+...|+|.+++..||..++.+
T Consensus 145 w~~~g~s~~pc~~~Y~G~~p~SEpEt~Al~~~~~~~~~~~~~~l~~HSyg~~i~~Py~~~~~~~~~~~~~~~la~~~~~a 224 (300)
T cd03871 145 WCTVGASRNPCDETYCGSAPESEKETKALADFIRNNLSSIKAYLTIHSYSQMLLYPYSYTYKLPENHAELNSVAKGAVKE 224 (300)
T ss_pred cCCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHhcCcceeEEEEeccCccEEEecCcCCCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999877899999999999999999999998999999999999999999
Q ss_pred HHHhcCCeeeeeccc
Q psy15737 429 MRVAGGGAYTFVLMI 443 (444)
Q Consensus 429 i~~~~g~~Y~~g~~~ 443 (444)
|+.++|+.|++|+++
T Consensus 225 i~~~~g~~y~~g~~~ 239 (300)
T cd03871 225 LASLYGTKYTYGPGA 239 (300)
T ss_pred HHHhhCCCCcCCccc
Confidence 999999999999864
No 5
>cd03870 M14_CPA Peptidase M14 Carboxypeptidase (CP) A (CPA) belongs to the A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA enzymes generally favor hydrophobic residues. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase A (PCPA) is produced by the exocrine pancreas and stored as a stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. This subfamily includes CPA1, CPA2 and CPA4 forms. Within these A forms, there are slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 p
Probab=100.00 E-value=7.2e-66 Score=513.95 Aligned_cols=235 Identities=39% Similarity=0.790 Sum_probs=224.0
Q ss_pred cccccCCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCCCCCceEEEeccccCCCCccHHHHHHHHHHH
Q psy15737 192 MTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAKAFWIDGGIHAREWITPATVSFILSEL 271 (444)
Q Consensus 192 ~~~~~Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L 271 (444)
++|+.||+++||.+||+.|+++||+++++++||+|+|||+|++++|+++...||+|||+||+|||||+|++++++++++|
T Consensus 1 ~~~~~Y~~~~ei~~~l~~L~~~~p~~v~~~~iG~S~eGR~I~~l~is~~~~~kp~v~i~~giHarE~i~~~~~l~~~~~L 80 (301)
T cd03870 1 FNYATYHTLDEIYDFMDLLVAEHPNLVSKLQIGRSYEGRPIYVLKFSTGGSNRPAIWIDAGIHSREWITQATGVWFAKKI 80 (301)
T ss_pred CCccccCCHHHHHHHHHHHHHHCCCceEEEecccCCCCCeEEEEEEecCCCCCceEEEeccccccchhhHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999887789999999999999999999999999999
Q ss_pred HHhchhcH---HhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCC
Q psy15737 272 VENREAQE---DYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFH 348 (444)
Q Consensus 272 ~~~~~~~~---~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~ 348 (444)
+.++..++ .+|++++|+|||++|||||+|+++.+|+|||||+++. +.+|.||| |||||+++
T Consensus 81 ~~~~~~d~~~~~lLd~~~i~ivP~~NPDG~~~s~~~~r~wrknr~~~~-~~~~~GVD---------------LNRNf~~~ 144 (301)
T cd03870 81 TEDYGQDPSFTAILDSMDIFLEIVTNPDGYVFTHSQNRLWRKTRSVTS-GSLCVGVD---------------PNRNWDAG 144 (301)
T ss_pred HHhcccCHHHHHHHHhCcEEEEeeecCchhhheecccceeecCCCCCC-CCCccccc---------------cccCCCcc
Confidence 99886553 5899999999999999999999999999999999875 67899999 99999999
Q ss_pred CCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHH
Q psy15737 349 WGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEA 428 (444)
Q Consensus 349 W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~~~~~~d~~~l~~la~~~a~a 428 (444)
|+..|+|.+||+++|+|+.|||||||+||++|+... .++.+||||||||++|+|||+|+...+||.++++.||..++++
T Consensus 145 w~~~g~s~~p~~~~Y~G~~pfSEpEt~av~~~~~~~-~~~~~~l~lHS~g~~i~yP~~~~~~~~~~~~~~~~la~~~~~a 223 (301)
T cd03870 145 FGGAGASSNPCSETYHGPYANSEVEVKSIVDFVKSH-GNFKAFISIHSYSQLLLYPYGYTTQSIPDKTELNQVAKSAVAA 223 (301)
T ss_pred cCcCCCCCCCCccccCCCCCCccHHHHHHHHHHhhC-CCeEEEEEeccCCceEEecCcCCCCCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999885 5799999999999999999999999999999999999999999
Q ss_pred HHHhcCCeeeeeccc
Q psy15737 429 MRVAGGGAYTFVLMI 443 (444)
Q Consensus 429 i~~~~g~~Y~~g~~~ 443 (444)
|++++|+.|++|+++
T Consensus 224 i~~~~g~~y~~g~~~ 238 (301)
T cd03870 224 LKSLYGTSYKYGSII 238 (301)
T ss_pred HHHhcCCcccccccc
Confidence 999999999999875
No 6
>cd06246 M14_CPB2 Peptidase M14 Carboxypeptidase (CP) B2 (CPB2, also known as plasma carboxypeptidase B, carboxypeptidase U, and CPU), belongs to the carboxpeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPB2 enzyme displays B-like activity; it only cleaves the basic residues lysine or arginine. It is produced and secreted by the liver as the inactive precursor, procarboxypeptidase U or PCPB2, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). It circulates in plasma as a zymogen bound to plasminogen, and the active enzyme, TAFIa, inhibits fibrinolysis. It is highly regulated, increased TAFI concentrations are thought to increase the risk of thrombosis and coronary artery disease by reducing fibrinolytic activity whil
Probab=100.00 E-value=1.2e-65 Score=512.39 Aligned_cols=234 Identities=34% Similarity=0.710 Sum_probs=222.2
Q ss_pred cccCCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecC-CCCCceEEEeccccCCCCccHHHHHHHHHHHH
Q psy15737 194 FHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSG-VPNAKAFWIDGGIHAREWITPATVSFILSELV 272 (444)
Q Consensus 194 ~~~Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~-~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~ 272 (444)
|+.||+++||.+||+.|+++||+++++.+||+|+|||+|++++|+++ ...||+|||+||||||||+|+++++++|++|+
T Consensus 2 ~~~Y~~~~ei~~~l~~l~~~~p~~v~~~~iG~S~egR~I~~l~is~~~~~~k~~v~i~~giHarE~i~~~~~l~~i~~Ll 81 (300)
T cd06246 2 YEQYHSLNEIYSWIEFITERHSDMLEKIHIGSSFEKRPLYVLKVSGKEQTAKNAIWIDCGIHAREWISPAFCLWFVGHAT 81 (300)
T ss_pred CCccCCHHHHHHHHHHHHHHCCCcEEEEecccCCCCCeEEEEEEeCCCCCCCCeEEEecccCccchhhHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999875 35789999999999999999999999999999
Q ss_pred Hhchhc---HHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCC
Q psy15737 273 ENREAQ---EDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHW 349 (444)
Q Consensus 273 ~~~~~~---~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W 349 (444)
+.+..+ ..+|++++|+|||++|||||+|+++++|||||||++.. ..+|.||| ||||||++|
T Consensus 82 ~~~~~d~~~~~lL~~~~i~ivP~~NPDG~~~~~~~~r~wRknr~~~~-~~~~~GVD---------------LNRNf~~~w 145 (300)
T cd06246 82 QFYGIDGQMTNLLRHMDFYIMPVMNVDGYDYTWKKNRMWRKNRSFYA-NSHCIGTD---------------LNRNFDAKW 145 (300)
T ss_pred HHhcCCHHHHHHHHhCeEEEEEeecCCceeEEEeccceeecCCCCCC-CCCccCcc---------------ccccccccc
Confidence 987655 35899999999999999999999999999999999865 67899999 999999999
Q ss_pred CCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHHH
Q psy15737 350 GGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEAM 429 (444)
Q Consensus 350 ~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~~~~~~d~~~l~~la~~~a~ai 429 (444)
+..|+|.+||+++|+|+.|||||||+||++|+.++..++.+||||||||++|+|||+|+...++|.+++..+|..++.+|
T Consensus 146 ~~~g~s~~p~~~~y~G~~p~SEpEt~av~~~~~~~~~~i~~~is~Hs~g~~i~~P~~~~~~~~~~~~~~~~la~~~~~ai 225 (300)
T cd06246 146 CCEGASSSSCSETYCGPYPESEPEVKAVASFLRRHINQIKAYISMHSYSQMILFPYSYTRSKSKDHEELSLLAKEAVRAI 225 (300)
T ss_pred CCCCCCCCCCCCCcCCCCCCccHHHHHHHHHHHhCCcceeEEEEeccCCcEEEeccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998667999999999999999999999999999999999999999999
Q ss_pred HHhcCCeeeeeccc
Q psy15737 430 RVAGGGAYTFVLMI 443 (444)
Q Consensus 430 ~~~~g~~Y~~g~~~ 443 (444)
++++|+.|++|+++
T Consensus 226 ~~~~~~~y~~g~~~ 239 (300)
T cd06246 226 RRTSNNRYTHGSGA 239 (300)
T ss_pred HHhhCCCCeecCCC
Confidence 99999999999875
No 7
>cd06248 M14_CPA_CPB_like Peptidase M14 Carboxypeptidase A/B-like subfamily: This is one of two main M14 carboxypeptidase subfamilies, defined by sequence and structural homology, the other being N/E. Carboxypeptidases (CPs) hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Majority of the proteins in this subfamily have not been characterized as yet. The A/B enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; the proenzymes are called procarboxypeptidases. These enzymes exhibit distinct substrate specificity pattern; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5,
Probab=100.00 E-value=2.3e-62 Score=490.17 Aligned_cols=234 Identities=38% Similarity=0.772 Sum_probs=219.7
Q ss_pred cccCCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCC---CCCceEEEeccccCCCCccHHHHHHHHHH
Q psy15737 194 FHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV---PNAKAFWIDGGIHAREWITPATVSFILSE 270 (444)
Q Consensus 194 ~~~Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~---~~kp~v~i~~giHgrE~i~~~~~l~~i~~ 270 (444)
|+.||+|+||.+||+.|+++||+++++++||+|+|||+|++++|+++. ..||+|||+||||||||+|++++++++++
T Consensus 1 ~~~Y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~I~~~~~~~~~k~~v~i~~giHarE~~~~~~~l~~~~~ 80 (304)
T cd06248 1 FDSYHPLEDHLQWLRDLQAAFPNNSELFTIGKSYEGRTILGLHIWGSGGEKGSKPAIVIHGTVHAREWISTMTVEYLAYQ 80 (304)
T ss_pred CCccCCHHHHHHHHHHHHHHCCCceEEeceEECCCCCeEEEEEEecCCCCCCCCcEEEEECCcCcCccccHHHHHHHHHH
Confidence 689999999999999999999999999999999999999999999753 46899999999999999999999999999
Q ss_pred HHHhchhc---HHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCC
Q psy15737 271 LVENREAQ---EDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGF 347 (444)
Q Consensus 271 L~~~~~~~---~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~ 347 (444)
|++++..+ ..+|++++|+|||++|||||+|+++++|||||||+++. ...|.||| |||||++
T Consensus 81 L~~~~~~d~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~~~wRknr~~~~-~~~~~GVD---------------LNRNf~~ 144 (304)
T cd06248 81 LLTGYGSDATVTALLDKFDFYIIPVVNPDGFVYTQTSDRLWRKNRQPTS-GSSCVGTD---------------LNRNWPY 144 (304)
T ss_pred HHHhhccCHHHHHHHHhCcEEEEeeecCchhhhhccchhhhhhcCCCCC-CCCceeec---------------CCCCCCC
Confidence 99988544 45899999999999999999999999999999999875 56799999 9999999
Q ss_pred CCCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhC--CCeeEEEEeCCCCCcccccCCCCCC-CCCCHHHHHHHHHH
Q psy15737 348 HWGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANN--ANMKAFVTFHSYGQYILYPWGYNKK-VPPDYADLDRVGRA 424 (444)
Q Consensus 348 ~W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~--~~~~~~idlHs~g~~ilyP~g~~~~-~~~d~~~l~~la~~ 424 (444)
+|+..|+|.+||+++|+|+.|||||||+||++|+.++. .++.+|||+|||+++|+|||+|+.. .|+|.+++..||..
T Consensus 145 ~w~~~g~s~~p~s~~Y~G~~~~sEpEt~av~~~~~~~~~~~~~~~~l~~Hs~~~~i~~P~~~~~~~~~~d~~~~~~la~~ 224 (304)
T cd06248 145 KWDGGGSSTNPCSETYRGESPGDAPEAKALAAFLNKLAEGQGIVGYIDWHSYSQLILYPYGYSCDAVPPNLENLEELAAG 224 (304)
T ss_pred cccCCCCCCCCCCCCcCCCCCCccHHHHHHHHHHHhccccCceEEEEEeccCcceEEecCcCCCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999874 3799999999999999999999865 58899999999999
Q ss_pred HHHHHHHhcCCeeeeeccc
Q psy15737 425 AAEAMRVAGGGAYTFVLMI 443 (444)
Q Consensus 425 ~a~ai~~~~g~~Y~~g~~~ 443 (444)
+|++|++++|+.|++|+++
T Consensus 225 ~a~ai~~~~g~~y~~g~~~ 243 (304)
T cd06248 225 LAKAIRAVSGTTYTVGPAC 243 (304)
T ss_pred HHHHHHHhcCCCCcccccc
Confidence 9999999999999999864
No 8
>cd03860 M14_CP_A-B_like The Peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily. CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the
Probab=100.00 E-value=4.7e-57 Score=450.26 Aligned_cols=231 Identities=54% Similarity=1.023 Sum_probs=219.0
Q ss_pred CCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCC-CCCceEEEeccccCCCCccHHHHHHHHHHHHHhc
Q psy15737 197 YHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV-PNAKAFWIDGGIHAREWITPATVSFILSELVENR 275 (444)
Q Consensus 197 Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~-~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~ 275 (444)
||||+||.++|+.|+++||+++++.+||+|+|||+|++++|+++. ..||+|||+||+|||||+|+++++++++.|+.++
T Consensus 1 Y~ty~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~l~i~~~~~~~k~~v~i~~~~Hg~E~~g~~~~~~~~~~L~~~~ 80 (294)
T cd03860 1 YHTYDEIYAWLDELAQKYPDLVTVETIGRSYEGRPIKGVKISNGGRSNKPAIFIDAGIHAREWISPATALYIINQLVESY 80 (294)
T ss_pred CCCHHHHHHHHHHHHHHCCCceEEEeeeeCCCCCeEEEEEEecCCCCCCcEEEEECCcCcCccccHHHHHHHHHHHHHcc
Confidence 899999999999999999999999999999999999999999875 6789999999999999999999999999999987
Q ss_pred h-hcHHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCCC
Q psy15737 276 E-AQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGS 354 (444)
Q Consensus 276 ~-~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g~ 354 (444)
. ....+|++++|+|||++||||++++++++++|||||.+.. +.+|.||| |||||++.|+..++
T Consensus 81 ~~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~wrknr~~~~-~~~~~GvD---------------LNRnf~~~w~~~~~ 144 (294)
T cd03860 81 DPEVTDLLDNYDWYILPVANPDGYEYTHTTDRLWRKNRSPNS-GGGCVGVD---------------LNRNFDYHWGGGGA 144 (294)
T ss_pred CHHHHHHHHcCeEEEEeeecCCchhhhccccchhcccCCCCC-CCCceeec---------------cCCCCCCCCccCCC
Confidence 5 3456999999999999999999999999999999999764 57899999 99999999999999
Q ss_pred CCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15737 355 SKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEAMRVAGG 434 (444)
Q Consensus 355 s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~~~~~~d~~~l~~la~~~a~ai~~~~g 434 (444)
+.+||+++|+|+.|||||||+||++++.++..++.++||||+++++++|||+++...|+|.+.++.||..++++|..++|
T Consensus 145 ~~~p~~~~y~G~~~~sepEt~al~~~~~~~~~~~~~~ld~Hs~~~~i~~P~~~~~~~~~d~~~~~~la~~~~~~~~~~~g 224 (294)
T cd03860 145 SSDPCSETYAGPSAFSEPETRAVRDFLLSLRGRIKAYLSLHSYGQLILYPWGYTSELPPNYEDLREVAKAAADAIRAVYG 224 (294)
T ss_pred CCCCCCCCccCCCCCchHHHHHHHHHHHhccccEEEEEEeccCCceEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999855899999999999999999999988999999999999999999999999
Q ss_pred Ceeeeeccc
Q psy15737 435 GAYTFVLMI 443 (444)
Q Consensus 435 ~~Y~~g~~~ 443 (444)
+.|.+|++.
T Consensus 225 ~~Y~~g~~~ 233 (294)
T cd03860 225 TRYTVGSSA 233 (294)
T ss_pred CCCcccccc
Confidence 999999865
No 9
>cd03859 M14_CPT Peptidase M14-like domain of carboxypeptidase (CP) T (CPT), CPT belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT has moderate similarity to CPA and CPB, and exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues like CPA and C-terminal positively charged residues like CPB. CPA and CPB are M14 family peptidases but do not belong to this CPT group. The substrate specificity difference between CPT and CPA and CPB is ascribed to a few amino acid substitutions at the substrate-binding pocket while the spatial organization of the binding site remains the same as in all Zn-CPs. CPT has increased thermal stability in presence of Ca2+ ions, and two disulfide bridges which give an additional stabilization factor.
Probab=100.00 E-value=3.2e-56 Score=444.47 Aligned_cols=219 Identities=37% Similarity=0.692 Sum_probs=201.4
Q ss_pred ccCCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCC---CCCceEEEeccccCCCCccHHHHHHHHHHH
Q psy15737 195 HKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV---PNAKAFWIDGGIHAREWITPATVSFILSEL 271 (444)
Q Consensus 195 ~~Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~---~~kp~v~i~~giHgrE~i~~~~~l~~i~~L 271 (444)
+.||+|+||.++|+.|+++||+++++++||+|++||+|++++|+++. ..||+|||+||+|||||+|++++++||+.|
T Consensus 2 ~~y~~y~ei~~~l~~l~~~~p~~v~~~~iG~S~eGR~i~~l~i~~~~~~~~~kp~i~i~~~iH~~E~~g~~~~l~~i~~L 81 (295)
T cd03859 2 RGYHNYLEMVDELNAAAAAYPNLTKVKSIGKSYEGRDIIAVKISDNVATDENKPEVLYTSTHHAREWLSLEMAIYLMHYL 81 (295)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCceEEEeeeecCCCCeEEEEEEecCCCCCCCCCEEEEECCcCccchhhHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999864 468999999999999999999999999999
Q ss_pred HHhchhc---HHhhccceEEEEeecCCCCcccccc--ccccccccCCCCCC-CCCCccccCCCCCCCccccCCCCCCCCC
Q psy15737 272 VENREAQ---EDYIKKIDFYVLPITNPDGYEYTHT--TERLWRKNRRKSPK-GDSCSGIDLVTYDSDEEDEKTIDLNRNW 345 (444)
Q Consensus 272 ~~~~~~~---~~lL~~~~~~IvP~~NPDGy~~~~~--~dr~WRKnr~~~~~-~~~c~GvD~~~~d~~~~~~~gvDLNRNf 345 (444)
+..+..+ ..+|++++|+|||++|||||+++++ .+++|||||+++.. ..+|.||| |||||
T Consensus 82 ~~~~~~d~~~~~lL~~~~i~ivP~~NPDG~~~~~~~~~~~~wrkn~~~~~~~~~~~~GvD---------------LNRNf 146 (295)
T cd03859 82 LENYGKDPRIQNLVDNRELWFVPVVNPDGYEYDETTGGYRSWRKNRRDNSGDISSSDGVD---------------LNRNY 146 (295)
T ss_pred HHhhccCHHHHHHHhcCeEEEEeeeCCCcceEEeeccCccceeccCCCCCCCcCcceeec---------------CCCCC
Confidence 9987644 4589999999999999999999998 89999999987631 25789999 99999
Q ss_pred CCCCCC--CCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCCCCC---CCCHHHHHH
Q psy15737 346 GFHWGG--VGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKV---PPDYADLDR 420 (444)
Q Consensus 346 ~~~W~~--~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~~~~---~~d~~~l~~ 420 (444)
+++|+. .|+|.+||+++|+|+.|||||||+||++|+.++ +++.++|||||+|++|+|||+++... ++|...++.
T Consensus 147 ~~~w~~~~~g~s~~p~~~~y~G~~p~sepEt~av~~~~~~~-~~~~~~l~~Hs~g~~i~~P~~~~~~~~~~~~d~~~~~~ 225 (295)
T cd03859 147 GYKWGYDSGGSSNDPSSETYRGPSAFSEPETQAIRDFVESH-KNIKTALNYHTYSNLWLYPYGYQYNEPMPSKDEIDFVA 225 (295)
T ss_pred CcccCCCCCCCCCCCCCCCccCCCCCchHHHHHHHHHHHhC-CCeEEEEEeecCCceEEeCCcCCCCCCCCCccHHHHHH
Confidence 999997 478999999999999999999999999999986 48999999999999999999998764 789999999
Q ss_pred HHHHHHHHH
Q psy15737 421 VGRAAAEAM 429 (444)
Q Consensus 421 la~~~a~ai 429 (444)
||..++.+.
T Consensus 226 la~~~~~~~ 234 (295)
T cd03859 226 LGGTMAESN 234 (295)
T ss_pred HHHHHHHHh
Confidence 999988875
No 10
>cd06228 Peptidase_M14-like_3 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=100.00 E-value=8.9e-57 Score=450.86 Aligned_cols=205 Identities=32% Similarity=0.543 Sum_probs=185.4
Q ss_pred eeeeecCCceEEEEEeecCC-CCCceEEEeccccCCCCccHHHHHHHHHHHHHhchh---------------cHHhhccc
Q psy15737 222 DIGRSLEGRPLRLVKISSGV-PNAKAFWIDGGIHAREWITPATVSFILSELVENREA---------------QEDYIKKI 285 (444)
Q Consensus 222 ~iG~S~eGR~I~~l~Is~~~-~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~---------------~~~lL~~~ 285 (444)
.-++|+|||+|++|+|+++. ..||+|||+||||||||++++++++||++|+..+.. ..++|+ +
T Consensus 5 ~~~~S~EgR~I~~l~I~~~~~~~kp~V~i~ggiHAREwis~~~~l~~i~~Ll~~y~~~~~~~yg~~~~~d~~v~~lL~-~ 83 (332)
T cd06228 5 LPHKTYEGRTPHGAKIGAGTLTSRYGALFIGGVHARERGSPDNLIYFVSDLLNARKAGRGIKYGGRTYTAADVKAILD-A 83 (332)
T ss_pred CCCCCCCCCeeEEEEEeCCCCCCCCEEEEEccccccchhhHHHHHHHHHHHHHhhhccccccccccccccHHHHHHHh-C
Confidence 35899999999999999864 579999999999999999999999999999997642 145899 9
Q ss_pred eEEEEeecCCCCccccccccccccccCCCCCC--CCCCccccCCCCCCCccccCCCCCCCCCCCCCCC----------CC
Q psy15737 286 DFYVLPITNPDGYEYTHTTERLWRKNRRKSPK--GDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGG----------VG 353 (444)
Q Consensus 286 ~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~--~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~----------~g 353 (444)
+|+|||++|||||+|+++.+|||||||+++.. ..+|.||| |||||+++|+. .|
T Consensus 84 ~i~IvP~vNPDGy~~s~~~~r~WRKNr~~~~~~~~~~c~GVD---------------LNRNf~~~W~~~~~~~~~~~~~g 148 (332)
T cd06228 84 GIVVFPLVNPDGRAHDQTANSCWRKNRNPASAGPNPSSVGVD---------------INRNFDFLWDFQKYFDPGASRSV 148 (332)
T ss_pred eEEEEEeecCcchhheeccchhhhccCCCCcccccCcccccc---------------cCCCCCCCcCcccccccccccCC
Confidence 99999999999999999999999999998641 23799999 99999999983 46
Q ss_pred CCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCCCC-----------------------
Q psy15737 354 SSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKK----------------------- 410 (444)
Q Consensus 354 ~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~~~----------------------- 410 (444)
+|.+||+++|+|++|||||||+||++++.+. .++.+|||||||||+|+|||||+..
T Consensus 149 ~S~~Pcse~Y~G~~pfSEPET~av~~~~~~~-~~~~~yls~HSygq~il~P~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (332)
T cd06228 149 ASTDPASETFHGTAAFSEPETRNVVWVMDTF-KNIRWFVDLHSYGGDVLYSWGDDENQSTNPAMNFMNPAYDGKRGIVAA 227 (332)
T ss_pred CCCCCCccccCCCCCCccHHHHHHHHHHhcc-CCeEEEEEeccCCceEEecccCCccccccccccccccccccccccccc
Confidence 8999999999999999999999999999885 5699999999999999999999852
Q ss_pred ---------CCCCHHHHHHHHHHHHHHHHHhcCCeeeeeccc
Q psy15737 411 ---------VPPDYADLDRVGRAAAEAMRVAGGGAYTFVLMI 443 (444)
Q Consensus 411 ---------~~~d~~~l~~la~~~a~ai~~~~g~~Y~~g~~~ 443 (444)
.|+|+++|..+|..++.||++++|+.|++|++.
T Consensus 228 ~~~~~~~~~~~~~~~~l~~~a~~~~~ai~~~~g~~Y~~g~~~ 269 (332)
T cd06228 228 PDTRYGEYIDSDDWDAAVNLAARMGLAMAAARGRIYTVSQSV 269 (332)
T ss_pred cccccccccCCCCHHHHHHHHHHHHHHHHHHhCCCceeCCcc
Confidence 278999999999999999999999999999864
No 11
>cd06905 Peptidase_M14-like_8 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=100.00 E-value=7.3e-56 Score=450.52 Aligned_cols=240 Identities=31% Similarity=0.533 Sum_probs=199.2
Q ss_pred cccCCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCC----CCCceEEEeccccCCCCccHHHHHHHHH
Q psy15737 194 FHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV----PNAKAFWIDGGIHAREWITPATVSFILS 269 (444)
Q Consensus 194 ~~~Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~----~~kp~v~i~~giHgrE~i~~~~~l~~i~ 269 (444)
|+.||+|+||.+||+.|+++||++|++.+||+|+|||+|++|+|+++. ..||+|||+||||||||+|+++++++|+
T Consensus 1 ~~~Y~ty~ei~~~L~~La~~~P~lv~l~~IG~S~EGR~I~~l~Is~~~~~~~~~Kp~I~i~~giHarEwig~~~~l~li~ 80 (360)
T cd06905 1 FSRYYRYDELTAALQAWASAYPQLCSLESIGKSYEGRDIWLLTLTNQATGPDREKPAFWIDANIHATEVTGSAVALYVIQ 80 (360)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCceEEEEeeecCCCCceEEEEecCCCCCCCCCCcEEEEecCCCCCchHHHHHHHHHHH
Confidence 678999999999999999999999999999999999999999998753 4689999999999999999999999999
Q ss_pred HHHHhchhc---HHhhccceEEEEeecCCCCcccccc-ccccccccCCCCCCC--------------CCCc---------
Q psy15737 270 ELVENREAQ---EDYIKKIDFYVLPITNPDGYEYTHT-TERLWRKNRRKSPKG--------------DSCS--------- 322 (444)
Q Consensus 270 ~L~~~~~~~---~~lL~~~~~~IvP~~NPDGy~~~~~-~dr~WRKnr~~~~~~--------------~~c~--------- 322 (444)
+|++++..+ ..+|++++|+|||++|||||+|+++ ++|+|||||++.... ..|.
T Consensus 81 ~Ll~~y~~d~~i~~lLd~~~~~IvP~vNPDG~e~~~~~~~r~wRk~r~~~~~~~~~~g~~~~D~n~D~~~~~mr~~d~~g 160 (360)
T cd06905 81 TLLNGYGSDPEVTRLLDGYTFYILPRLNPDGAEQALTHPPYVRRSSRRPYPYPDRIDGLYPEDIDGDGLILQMRVKDPCG 160 (360)
T ss_pred HHHHhccCCHHHHHHHhcCeEEEEeeeCCChheEEeeccccccccCCCCcccccccccccccccCccchhheeecccccc
Confidence 999987544 3589999999999999999999999 999999999875310 1230
Q ss_pred ------------------------------cccCCCCCCC----ccccCCCCCCCCCCCCCCCCCCCCCccccccCCCCC
Q psy15737 323 ------------------------------GIDLVTYDSD----EEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGP 368 (444)
Q Consensus 323 ------------------------------GvD~~~~d~~----~~~~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~~p 368 (444)
|.| ..+||. .....|+||||||+++|+..| +++|+|++|
T Consensus 161 ~w~~~~~~p~~m~~~~~~~~~g~~y~~~~eg~~-~~~dg~~~~~~~~~~GvDlNRNf~~~W~~~~------~~~y~G~~p 233 (360)
T cd06905 161 AWKVSERDPRIMVRREPDEFGGTYYRLLPEGLI-RNYDGYNIKIAPPLEGLDFNRNFPHDWRPEG------EQYGAGPFP 233 (360)
T ss_pred ccccccccchhhccccccccCceeeeecccccc-cccccccccccccccCCCcccCcCCCCCCCC------CcCCCCCCC
Confidence 001 000110 112269999999999997543 568999999
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCCCCC---CCCHHHHHHHHHHHHHHHHH---hcC-Ceeeeec
Q psy15737 369 FSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKV---PPDYADLDRVGRAAAEAMRV---AGG-GAYTFVL 441 (444)
Q Consensus 369 ~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~~~~---~~d~~~l~~la~~~a~ai~~---~~g-~~Y~~g~ 441 (444)
||||||+||++|+.++ +++.+|||||||||+|||||||+... ++|...++.+|..+++ +.. +++ +.|++|+
T Consensus 234 ~SEpEt~av~~~~~~~-~~i~~~is~Hsyg~~il~P~g~~~~~~~~~~~~~~~~~la~~~~~-~~~y~~~~~~~~~~~~~ 311 (360)
T cd06905 234 FSEPETRAVVEFWTDH-PNINGFISYHTYSGVILRPYSDKPDDQMPVDDLELYKALGEKGEE-LTGYPTVSVYHEFRYHP 311 (360)
T ss_pred CChHHHHHHHHHHhcC-CCeEEEEEecCCcCeeeeCCCCCcCcCCChhhHHHHHHHHHHHHH-hcCccccccccceecCC
Confidence 9999999999999884 68999999999999999999999764 6677788888887775 543 444 6777765
Q ss_pred c
Q psy15737 442 M 442 (444)
Q Consensus 442 ~ 442 (444)
+
T Consensus 312 ~ 312 (360)
T cd06905 312 K 312 (360)
T ss_pred c
Confidence 4
No 12
>cd06227 Peptidase_M14-like_2 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=100.00 E-value=2.4e-54 Score=425.25 Aligned_cols=215 Identities=26% Similarity=0.404 Sum_probs=198.4
Q ss_pred CCC-HHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCCC---CCceEEEeccccCCCCccHHHHHHHHHHHH
Q psy15737 197 YHR-MEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVP---NAKAFWIDGGIHAREWITPATVSFILSELV 272 (444)
Q Consensus 197 Y~t-~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~~---~kp~v~i~~giHgrE~i~~~~~l~~i~~L~ 272 (444)
||+ ++||++||++|+++||+ +++.+||+|+|||+|++|+|+.+.. .||.|||+||+|||||+|++++++||++|+
T Consensus 2 Yh~~~~ei~~~l~~l~~~~p~-~~~~~ig~S~egr~i~~i~~~~~~~~~~~k~~i~i~agiHarE~i~~~~~l~li~~L~ 80 (272)
T cd06227 2 YHTATDEINEEADALVKNIRL-SRLGELIESVKVRNFSSITLNPNGDPSKKKVKALLLFGEHARELISPETGLHLLSNLC 80 (272)
T ss_pred ccCCHHHHHHHHHHHHHHCCC-cEEeeeeeccCCceeeEEEecCCCCCCCCCCEEEEECCccCCchhhHHHHHHHHHHHH
Confidence 899 99999999999999999 8999999999999999999987543 589999999999999999999999999999
Q ss_pred Hhchhc-------HHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCC
Q psy15737 273 ENREAQ-------EDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNW 345 (444)
Q Consensus 273 ~~~~~~-------~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf 345 (444)
.++... ..+|++++|+|||++|||||+++++++++||||+. ||| |||||
T Consensus 81 ~~~~~~~~~~~~~~~lL~~~~i~ivP~~NPDG~~~~~~~~~~wR~N~~---------GVD---------------LNRNf 136 (272)
T cd06227 81 GELAETFDWGDLLKNILDNFDLKIIPNENPDGRKKVESGNYCLRENEN---------GVD---------------LNRNY 136 (272)
T ss_pred HhcccccchhHHHHHHHhcCcEEEEeccCCchheeEeccCcccccCCc---------ccc---------------ccccC
Confidence 987532 56999999999999999999999999999999973 899 99999
Q ss_pred CCCCCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCCCCCC-CCHHHHHHHHHH
Q psy15737 346 GFHWGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVP-PDYADLDRVGRA 424 (444)
Q Consensus 346 ~~~W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~~~~~-~d~~~l~~la~~ 424 (444)
+++|+..+.+. |+++|+|+.|||||||+||++++.++ ++.++||+|||+++++|||+|+...| ++..+++.++..
T Consensus 137 ~~~w~~~~~~~--~~~~y~G~~~~sEpEt~av~~~~~~~--~~~~~i~~Hs~~~~i~~P~~~~~~~~~~~~~~~~~~~~~ 212 (272)
T cd06227 137 GADWGFKEDDY--EDEEYSGPAPFSEPETRVLRDLLTSF--SPDVFLSVHSGTLALFTPYAYKKEQPEPNLAEDMRILLL 212 (272)
T ss_pred CcccccCCCCc--cccccCCCCCCCcHHHHHHHHHHHhC--CCeEEEEeccCCCEEEecCCCCCCCCCCCHHHHHHHHHH
Confidence 99999876533 99999999999999999999999998 79999999999999999999998877 999999998888
Q ss_pred HHHHHHHhcCCeeeeecccC
Q psy15737 425 AAEAMRVAGGGAYTFVLMIK 444 (444)
Q Consensus 425 ~a~ai~~~~g~~Y~~g~~~~ 444 (444)
++. ++|+.|++|++++
T Consensus 213 ~~~----~~~~~y~~G~~~~ 228 (272)
T cd06227 213 ISN----KHCPRCQVGSAGK 228 (272)
T ss_pred HHH----HhCCCCceecCcc
Confidence 776 6899999999753
No 13
>smart00631 Zn_pept Zn_pept.
Probab=100.00 E-value=5e-53 Score=417.94 Aligned_cols=225 Identities=50% Similarity=0.959 Sum_probs=209.6
Q ss_pred CCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecC-CCCCceEEEeccccCCCCccHHHHHHHHHHHHHhc
Q psy15737 197 YHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSG-VPNAKAFWIDGGIHAREWITPATVSFILSELVENR 275 (444)
Q Consensus 197 Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~-~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~ 275 (444)
|+||+||.++|+.|+++||+++++.+||+|++||+|++++|+++ ...||+|||+||+|||||+|++++++||++|+.++
T Consensus 1 y~ty~e~~~~l~~l~~~~~~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~k~~v~i~a~~Hg~E~~g~~~~~~~i~~L~~~~ 80 (277)
T smart00631 1 YHSYEEIEAWLKELAARYPDLVRLVSIGKSVEGRPIWVLKISDGGSHNKPAIFIDAGIHAREWIGPATALYLINQLLENY 80 (277)
T ss_pred CCCHHHHHHHHHHHHHHCCCceEEEeceecCCCCceEEEEEeCCCCCCCcEEEEECCccccccccHHHHHHHHHHHHHhc
Confidence 89999999999999999999999999999999999999999987 35799999999999999999999999999999987
Q ss_pred hhcH---HhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCC
Q psy15737 276 EAQE---DYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGV 352 (444)
Q Consensus 276 ~~~~---~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~ 352 (444)
..++ .+|++++|+|||++||||+++++.++|+|||||.+. .+|.||| |||||++.|+.
T Consensus 81 ~~~~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~~~wr~~r~~~---~~~~GvD---------------LNRnf~~~w~~- 141 (277)
T smart00631 81 GRDPRITKLLDKTDIYIVPVLNPDGYEYTHTGDRLWRKNRSPN---SNCRGVD---------------LNRNFPFHWGK- 141 (277)
T ss_pred ccCHHHHHHHHcCcEEEEEeecCchhhheecccccccCCCCCC---CCCcCcc---------------cCCCCCCCCCC-
Confidence 6544 589999999999999999999999999999999864 5789999 99999999986
Q ss_pred CCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCCCC-CCCCHHHHHHHHHHHHHHHHH
Q psy15737 353 GSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKK-VPPDYADLDRVGRAAAEAMRV 431 (444)
Q Consensus 353 g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~~~-~~~d~~~l~~la~~~a~ai~~ 431 (444)
+.+||+++|+|+.||||||||||++++.++. ++.++||||++++.++|||+++.. .|++.+.+..+++.+|+++.+
T Consensus 142 --~~~p~~~~y~G~~~~sepEt~ai~~~~~~~~-~~~~~id~Hs~~~~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (277)
T smart00631 142 --TGNPCSETYAGPSPFSEPETKAVRDFIRSNR-RFVLYIDLHSYSQLILYPYGYTKNDLPPNVDDLDAVAKALAKALAS 218 (277)
T ss_pred --CCCCCCCCcCCCCCCCcHHHHHHHHHHHhcC-CeeEEEEeccCCcEEEecCcCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999973 799999999999999999999876 677888889999999999999
Q ss_pred hcCCeeeeeccc
Q psy15737 432 AGGGAYTFVLMI 443 (444)
Q Consensus 432 ~~g~~Y~~g~~~ 443 (444)
.+|..|++|++.
T Consensus 219 ~~g~~y~~g~~~ 230 (277)
T smart00631 219 VHGTRYTYGISN 230 (277)
T ss_pred hcCCcccccccc
Confidence 999999988764
No 14
>cd03867 M14_CPZ Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPZ is a secreted Zn-dependent enzyme whose biological function is largely unknown. Unlike other members of the N/E subfamily, CPZ has a bipartite structure, which consists of an N-terminal cysteine-rich domain (CRD) whose sequence is similar to Wnt-binding proteins, and a C-terminal CP catalytic domain that removes C-terminal Arg residues from substrates. CPZ is enriched in the extracellular matrix and is widely distributed during early embryogenesis. That the CRD of CPZ can bind to Wnt4 suggests that CPZ plays a role in Wnt signaling.
Probab=100.00 E-value=3.8e-52 Score=429.77 Aligned_cols=222 Identities=23% Similarity=0.330 Sum_probs=195.7
Q ss_pred CCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCCC----CCceEEEeccccCCCCccHHHHHHHHHHHH
Q psy15737 197 YHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVP----NAKAFWIDGGIHAREWITPATVSFILSELV 272 (444)
Q Consensus 197 Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~~----~kp~v~i~~giHgrE~i~~~~~l~~i~~L~ 272 (444)
||+|+||++||+.|+++||+++++++||+|+|||+|++++||+++. .||+|||+||||||||+|++++++|+++|+
T Consensus 1 y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~EGR~i~~l~is~~~~~~~~~kp~v~i~~giHg~E~ig~~~~~~l~~~L~ 80 (395)
T cd03867 1 HHSYSQMVSVLKRTAARCSHIARTYSIGRSFEGRDLLVIEFSSNPGQHELLEPEVKYIGNMHGNEVLGRELLIYLAQFLC 80 (395)
T ss_pred CCCHHHHHHHHHHHHHhCCCceEEEEccccCCCceEEEEEeccCCCcccccCCeEEEEccccCCcHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999987542 489999999999999999999999999999
Q ss_pred Hhch-hc---HHhhccceEEEEeecCCCCcccccccc---ccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCC
Q psy15737 273 ENRE-AQ---EDYIKKIDFYVLPITNPDGYEYTHTTE---RLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNW 345 (444)
Q Consensus 273 ~~~~-~~---~~lL~~~~~~IvP~~NPDGy~~~~~~d---r~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf 345 (444)
++|. .+ ..+|++++|+|||++|||||+++++.+ ++|||+|. +|.||| |||||
T Consensus 81 ~~~~~~d~~v~~ll~~~~i~ivP~~NPDG~e~~~~~~~~~~~wr~~R~------n~~GvD---------------LNRNf 139 (395)
T cd03867 81 SEYLLGNQRIQTLINTTRIHLLPSMNPDGYEAAASEGAGYNGWTNGRQ------NAQNID---------------LNRNF 139 (395)
T ss_pred HhhhcCCHHHHHHhhCcEEEEEeccCCchHHhhhhcCccccccccCCc------CCCCcc---------------cccCC
Confidence 8763 23 459999999999999999999998876 68999975 499999 99999
Q ss_pred CCCCCC-------CCCCCC--ccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCCCC------
Q psy15737 346 GFHWGG-------VGSSKE--QCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKK------ 410 (444)
Q Consensus 346 ~~~W~~-------~g~s~~--pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~~~------ 410 (444)
|+.|.. .|++.+ ||++.|. .++|||||+||++|++++ +|.++++||||+++++|||||+..
T Consensus 140 ~~~~~~~~~~~~~~g~~~~~~p~p~~~~--~~~sepEt~Av~~~~~~~--~~~l~~s~Hs~~~~~~yP~~~t~~~~~~~~ 215 (395)
T cd03867 140 PDLTSEVYRRRRQRGARTDHIPIPDSYW--FGKVAPETKAVMKWMRSI--PFVLSASLHGGDLVVSYPYDFSRHPLEEKM 215 (395)
T ss_pred CcchhhhcchhhcccccccCCCCccccc--cCccCHHHHHHHHHHhhC--CceEEEEccCcceeEEcccccccCcccccc
Confidence 999964 344444 7777764 356999999999999998 699999999999999999999853
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHh--------cCCeeeeeccc
Q psy15737 411 --VPPDYADLDRVGRAAAEAMRVA--------GGGAYTFVLMI 443 (444)
Q Consensus 411 --~~~d~~~l~~la~~~a~ai~~~--------~g~~Y~~g~~~ 443 (444)
.+||.+.++.||+.+|.|+..+ +|..|.+|+++
T Consensus 216 ~~~~~d~~~~~~lA~~~a~a~~~~~~~~~~~~~~~~~~~g~i~ 258 (395)
T cd03867 216 FSPTPDEKVFKMLARTYADAHPTMSDRSTRRCGGNFHKRGGII 258 (395)
T ss_pred cCCCCcHHHHHHHHHHHHHhCccccCCCCCCCccccccCCCce
Confidence 6799999999999999999875 35567777754
No 15
>cd06226 M14_CPT_like Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase (CP) T (CPT)-like proteins. This group belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues and C-terminal positively charged residues. However, CPT does not belong to this CPT-like group.
Probab=100.00 E-value=9.6e-52 Score=410.60 Aligned_cols=198 Identities=35% Similarity=0.630 Sum_probs=177.9
Q ss_pred CCceEEEEeeeeec------CCceEEEEEeecCC-----CCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhcH---
Q psy15737 214 YPQLVTLTDIGRSL------EGRPLRLVKISSGV-----PNAKAFWIDGGIHAREWITPATVSFILSELVENREAQE--- 279 (444)
Q Consensus 214 ~p~~v~~~~iG~S~------eGR~I~~l~Is~~~-----~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~--- 279 (444)
||+++++++||+|+ +||+|++|+|+++. ..||+|||+|+||||||+|+++++++|++|++.+..++
T Consensus 1 ~p~~~~~~~iG~S~~~~~~~eGR~I~~l~ig~~~~~~~~~~kp~v~i~~~iHarE~ig~~~~l~~i~~L~~~~~~d~~v~ 80 (293)
T cd06226 1 YPNLAQWVDIGDSWDKPGGPAGYDIRALKLTNKATNSPTGPKPVFFIMGAIHAREYTTAELVLRFAEDLLEGYGTDADAT 80 (293)
T ss_pred CCcceEEEEeeEecccCcccCCceEEEEEEecCCCCcCCCCCCEEEEECCcCCCcHHHHHHHHHHHHHHHHhcccCHHHH
Confidence 79999999999999 99999999999854 36999999999999999999999999999999876543
Q ss_pred HhhccceEEEEeecCCCCccccccccccccccCCCCC---CCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-
Q psy15737 280 DYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSP---KGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSS- 355 (444)
Q Consensus 280 ~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~---~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s- 355 (444)
.+|++++|+|||++|||||+++++ +++|||||+++. ++.+|.||| |||||+++|+..+.+
T Consensus 81 ~lL~~~~i~ivP~~NPDG~~~~~~-~~~wRkNr~~~~~~~~~~n~~GVD---------------LNRNf~~~w~~~~~~~ 144 (293)
T cd06226 81 WLLDYHEIHVVPIVNPDGRKIAEQ-GLSQRKNANTSGGSNCSGSSYGVD---------------LNRNYSFGWGGAGASS 144 (293)
T ss_pred HHHhcCeEEEEecccCCcceeecc-CcceeccCCCCCCCCccccccccc---------------cccCCCCcCCcCCCCC
Confidence 489999999999999999999876 799999998754 122346777 999999999988766
Q ss_pred CCccccccCCCCCCCHHHHHHHHHHHHHhCC--------------CeeEEEEeCCCCCcccccCCCCCCCCCCHHHHHHH
Q psy15737 356 KEQCQQIYAGTGPFSEPETQAVSRFILANNA--------------NMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRV 421 (444)
Q Consensus 356 ~~pc~~~y~G~~p~SepEtral~~~i~~~~~--------------~~~~~idlHs~g~~ilyP~g~~~~~~~d~~~l~~l 421 (444)
.+||+++|+|+.|||||||+||++|+.++.. ++.++|||||||++|+|||+++...++|.+.++.|
T Consensus 145 ~~p~~~~y~G~~p~SEpEt~Av~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~HS~g~~i~~P~g~~~~~~p~~~~~~~l 224 (293)
T cd06226 145 GDPCSETYRGPAPGSEPETAALEDYIRGLFPDQRGPGDTDPAPDDTTGVYLDIHSYSNLVLYPWGWTTQPAPNDTQLRAL 224 (293)
T ss_pred CCCCCCCcCCCCCCCcHHHHHHHHHHHhccccccccccccccccccceEEEEeccCCCeEeecCcCCCCCCCCHHHHHHH
Confidence 8999999999999999999999999998741 28899999999999999999998899999999999
Q ss_pred HHHHHH
Q psy15737 422 GRAAAE 427 (444)
Q Consensus 422 a~~~a~ 427 (444)
|+.++.
T Consensus 225 a~~~~~ 230 (293)
T cd06226 225 GRKFAS 230 (293)
T ss_pred HHHHhh
Confidence 988764
No 16
>cd03868 M14_CPD_I The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain I. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at p
Probab=100.00 E-value=4.3e-50 Score=412.16 Aligned_cols=212 Identities=27% Similarity=0.440 Sum_probs=192.8
Q ss_pred CCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCC----CCCceEEEeccccCCCCccHHHHHHHHHHHH
Q psy15737 197 YHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV----PNAKAFWIDGGIHAREWITPATVSFILSELV 272 (444)
Q Consensus 197 Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~----~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~ 272 (444)
||+|+||.+||++|+++||+++++.+||+|+|||+|++++||++. ..||+|||+||||||||+|++++++|+++|+
T Consensus 1 Y~~y~ei~~~l~~l~~~~p~~~~l~~iG~S~eGR~i~~l~is~~~~~~~~~kp~v~~~~~iH~~E~ig~~~~l~l~~~L~ 80 (372)
T cd03868 1 YHHYEELTDLLHSLAKKYPNIARLHSIGRSVEGRELWVLRITDNVNRREPGEPMFKYVGNMHGDETVGRQVLIYLAQYLL 80 (372)
T ss_pred CCCHHHHHHHHHHHHHHCCCcEEEEeccccCCCceEEEEEEecCCCCCCCCCCeEEEECCcCCCcHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999753 3589999999999999999999999999999
Q ss_pred HhchhcH---HhhccceEEEEeecCCCCcccccccc--ccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCC
Q psy15737 273 ENREAQE---DYIKKIDFYVLPITNPDGYEYTHTTE--RLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGF 347 (444)
Q Consensus 273 ~~~~~~~---~lL~~~~~~IvP~~NPDGy~~~~~~d--r~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~ 347 (444)
++|..++ .+|++++|+|||++|||||+++++++ |+|||+|. +|.||| ||||||+
T Consensus 81 ~~y~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~~~~~~~R~------n~~GvD---------------LNRnf~~ 139 (372)
T cd03868 81 ENYGGDERVTELVNTTDIYLMPSMNPDGFERSQEGDCSCGGYGGRE------NANNVD---------------LNRNFPD 139 (372)
T ss_pred HhcccCHHHHHHHhCCEEEEEeeeCCchHHhhcccCccccCCCccC------CCCCcc---------------CCCCCCc
Confidence 9876553 58999999999999999999999887 78888754 689999 9999999
Q ss_pred CCCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCCCC--------CCCCHHHHH
Q psy15737 348 HWGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKK--------VPPDYADLD 419 (444)
Q Consensus 348 ~W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~~~--------~~~d~~~l~ 419 (444)
+|+..+. +.|+|||||+||++|+.++ +|.++++||+|+++++||||++.. .+||.+.++
T Consensus 140 ~~~~~~~-----------~~~~sepEt~av~~~~~~~--~~~l~~~lH~~~~~~~yP~~~~~~~~~~~~~~~~pd~~~~~ 206 (372)
T cd03868 140 QFEGKLQ-----------RLSERQPETVAMMKWIRSN--PFVLSGNLHGGSVVASYPYDDSSSHNECGVYSKSPDDAVFK 206 (372)
T ss_pred ccCCcCC-----------CCCCCCHHHHHHHHHHhhC--CcEEEEEccCccEEEeccccccCCCCCCcccCCCCCHHHHH
Confidence 9976432 6899999999999999997 899999999999999999999753 489999999
Q ss_pred HHHHHHHHHHHHh-------cCCeeeeecc
Q psy15737 420 RVGRAAAEAMRVA-------GGGAYTFVLM 442 (444)
Q Consensus 420 ~la~~~a~ai~~~-------~g~~Y~~g~~ 442 (444)
.||..+|.++..+ +|+.|.+|.+
T Consensus 207 ~la~~~a~~~~~~~~~~~~~~~~~~~~G~~ 236 (372)
T cd03868 207 YLALTYANNHPTMRTGKPCCEGETFKDGIT 236 (372)
T ss_pred HHHHHHHhhCHHhhCCCCCCccccCCCCcc
Confidence 9999999999865 5889998853
No 17
>cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappr
Probab=100.00 E-value=4.7e-50 Score=412.32 Aligned_cols=213 Identities=24% Similarity=0.362 Sum_probs=196.3
Q ss_pred CCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCC----CCCceEEEeccccCCCCccHHHHHHHHHHHH
Q psy15737 197 YHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV----PNAKAFWIDGGIHAREWITPATVSFILSELV 272 (444)
Q Consensus 197 Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~----~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~ 272 (444)
||+|+||.+||++|+++||+++++.+||+|+|||+|++++|+++. ..||+|||+||+|||||+|++++++|+++|+
T Consensus 1 Y~~y~ei~~~l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~agiH~~E~~g~~~~~~l~~~L~ 80 (374)
T cd03858 1 YHNYAELESFLKEVAANYPNITRLYSIGKSVQGRDLWVLEISDNPGVHEPGEPEFKYVGNMHGNEVVGRELLLRLAQYLC 80 (374)
T ss_pred CCCHHHHHHHHHHHHHhCCCceEEEEcccCCCCCEEEEEEEecCCCCCCCCCceEEEeccccCCchhHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999754 2689999999999999999999999999999
Q ss_pred Hhch-hc---HHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCC
Q psy15737 273 ENRE-AQ---EDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFH 348 (444)
Q Consensus 273 ~~~~-~~---~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~ 348 (444)
+++. .+ .++|++++|+|||++|||||+++++++|+|||+|. +|.||| |||||++.
T Consensus 81 ~~~~~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~w~~~R~------n~~GvD---------------LNRnf~~~ 139 (374)
T cd03858 81 ENYGAGDPRITRLVDNTRIHIMPSMNPDGYEKAAEGDCGGLTGRY------NANGVD---------------LNRNFPDL 139 (374)
T ss_pred HHhccCCHHHHHHHhCCEEEEEcccCCchhhhhcccCCcccccCC------CCccee---------------cccCCCcc
Confidence 9865 33 45999999999999999999999999999999875 478999 99999999
Q ss_pred CCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCC-------CCCCCCHHHHHHH
Q psy15737 349 WGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYN-------KKVPPDYADLDRV 421 (444)
Q Consensus 349 W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~-------~~~~~d~~~l~~l 421 (444)
|+..+. +|+.|||||||+||++++.++ +|.++||||+++++++|||+++ ...++|.+.+..|
T Consensus 140 ~~~~~~---------~G~~~~sepEt~al~~~~~~~--~~~~~i~~Hs~~~~~~yp~~~~~~~~~~~~~~~~d~~~~~~l 208 (374)
T cd03858 140 FFTNYR---------SSDNGPRQPETKAVMNWIKSI--PFVLSANLHGGALVANYPYDDSPSGKRTAYSATPDDELFRYL 208 (374)
T ss_pred cccccc---------cCCCcccCHHHHHHHHHHhhC--CceEEEEccCCceEEEcccccCCCccccCCCCCCCHHHHHHH
Confidence 986544 699999999999999999998 8999999999999999999998 3478999999999
Q ss_pred HHHHHHHHHHhcCC---------eeeeec
Q psy15737 422 GRAAAEAMRVAGGG---------AYTFVL 441 (444)
Q Consensus 422 a~~~a~ai~~~~g~---------~Y~~g~ 441 (444)
|..+|.++.+++|. .|.+|.
T Consensus 209 a~~~a~~~~~~~~~~~~~~~~~~~y~~G~ 237 (374)
T cd03858 209 AKTYADAHPTMHKGGPCCCNDDEEFPGGI 237 (374)
T ss_pred HHHHHHhCHHhcCCCCCCCcccccCCCCc
Confidence 99999999999886 677775
No 18
>cd06245 M14_CPD_III The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain III. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active a
Probab=100.00 E-value=6.7e-50 Score=408.33 Aligned_cols=205 Identities=20% Similarity=0.328 Sum_probs=188.4
Q ss_pred cCCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCC----CCCceEEEeccccCCCCccHHHHHHHHHHH
Q psy15737 196 KYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV----PNAKAFWIDGGIHAREWITPATVSFILSEL 271 (444)
Q Consensus 196 ~Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~----~~kp~v~i~~giHgrE~i~~~~~l~~i~~L 271 (444)
+||+|+||.+||++|+++||+++++++||+|+|||||++++|++++ +.||.|+++||||||||+|++++++++++|
T Consensus 1 ~Yh~y~ei~~~l~~l~~~~p~i~~l~~IG~S~eGR~l~~l~Is~~~~~~~~~kp~v~~~~giHg~E~ig~e~~l~l~~~L 80 (363)
T cd06245 1 RYHHYKELSEFLRGLTLNYPHITNLTSLGQSVEFRPILSLEISNKPNNSEPEEPKIRFVAGIHGNAPVGTELLLALAEFL 80 (363)
T ss_pred CCCCHHHHHHHHHHHHHHCCCceEEEEeeecCCCceEEEEEecCCCCCCCCCCCEEEEECCccCCcHHHHHHHHHHHHHH
Confidence 5999999999999999999999999999999999999999999753 368999999999999999999999999999
Q ss_pred HHhchhcH---HhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCC
Q psy15737 272 VENREAQE---DYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFH 348 (444)
Q Consensus 272 ~~~~~~~~---~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~ 348 (444)
+++|..++ .+|++++|+|+|++|||||+++++.+ +|++++ +.+|.||| |||||++.
T Consensus 81 ~~~y~~d~~v~~ll~~~~i~ivP~~NPDG~e~~~~~~-~~~~~~-----r~na~GvD---------------LNRNf~~~ 139 (363)
T cd06245 81 CMNYGKNPAVTKLIDRTRIVIVPSLNPDGREKAQEKQ-CTSKEG-----HTNAHGKD---------------LDTDFTSN 139 (363)
T ss_pred HHHccCCHHHHHHHhCCEEEEEeccCCchHHHeecCC-CcccCC-----CCCccccc---------------CCCCCCcc
Confidence 99886653 58999999999999999999998876 777765 46799999 99999865
Q ss_pred CCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHH
Q psy15737 349 WGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEA 428 (444)
Q Consensus 349 W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~~~~~~d~~~l~~la~~~a~a 428 (444)
|+|+.|+|||||+||++|+.+. +|+++++||+|+++++|||||+...+||.+.|..||+.+|.|
T Consensus 140 --------------~~g~~~~sepEt~Av~~~~~~~--~f~l~~~lH~~~~~~~yPy~~~~~~~pd~~~~~~la~~~a~a 203 (363)
T cd06245 140 --------------ASNMSADVQPETKAIIDNLISK--DFTLSVALDGGSVVATYPYDKPVQTVENKETLKHLAKVYANN 203 (363)
T ss_pred --------------cCCCCCCCcHHHHHHHHHHHhC--CceEEEEEcCCcEEEEecCCCCCcCCCCHHHHHHHHHHHHHh
Confidence 4588999999999999999997 899999999999999999999999999999999999999999
Q ss_pred HHHhcCCee
Q psy15737 429 MRVAGGGAY 437 (444)
Q Consensus 429 i~~~~g~~Y 437 (444)
...+++..+
T Consensus 204 h~~m~~~~~ 212 (363)
T cd06245 204 HPTMHLGQP 212 (363)
T ss_pred ChhhhcCCC
Confidence 998876544
No 19
>cd03869 M14_CPX_like Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Proteins belonging to this subgroup include CP-like protein X1 (CPX1), CP-like protein X2 (CPX2), and aortic CP-like protein (ACLP) and its isoform adipocyte enhancer binding protein-1 (AEBP1). AEBP1 is a truncated form of ACLP, which may arise from alternative splicing of the gene. These proteins are inactive towards standard CP substrates because they lack one or more critical active site and substrate-binding residues that are necessary for activity. They may function as binding proteins rather than as active CPs or display catalytic activity toward other substrates. Pro
Probab=100.00 E-value=1.6e-49 Score=407.88 Aligned_cols=215 Identities=20% Similarity=0.337 Sum_probs=192.4
Q ss_pred cCCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCC----CCCceEEEeccccCCCCccHHHHHHHHHHH
Q psy15737 196 KYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV----PNAKAFWIDGGIHAREWITPATVSFILSEL 271 (444)
Q Consensus 196 ~Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~----~~kp~v~i~~giHgrE~i~~~~~l~~i~~L 271 (444)
.||+|+||.+||++|+++||+++++.+||+|+|||+|++++|++++ ..||.|+++||||||||+|++++++++++|
T Consensus 4 ~yh~y~em~~~L~~la~~yP~i~~l~sIGkS~EGR~L~~l~Is~~~~~~~~~kP~v~~~g~iHgrE~ig~~~~l~li~~L 83 (405)
T cd03869 4 KHHNYKDMRQLMKVVNEMCPNITRIYNIGKSYQGLKLYAMEISDNPGEHELGEPEFRYVAGMHGNEVLGRELLLLLMQFL 83 (405)
T ss_pred ccCCHHHHHHHHHHHHHHCCCceEEEEeEECcCCceEEEEEEecCCccccCCCCeEEEEcccCCCcHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999753 258999999999999999999999999999
Q ss_pred HHhch-hc---HHhhccceEEEEeecCCCCccccccc---cccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCC
Q psy15737 272 VENRE-AQ---EDYIKKIDFYVLPITNPDGYEYTHTT---ERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRN 344 (444)
Q Consensus 272 ~~~~~-~~---~~lL~~~~~~IvP~~NPDGy~~~~~~---dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRN 344 (444)
+++|. .+ .++|++++|+|+|++|||||++++++ .++|||+|. +|.||| ||||
T Consensus 84 ~~~y~~~d~~v~~Ll~~~~i~IvP~~NPDG~e~s~~~~~~~~~Wrk~R~------na~GVD---------------LNRN 142 (405)
T cd03869 84 CQEYLAGNPRVVHLVEETRIHLLPSMNPDGYEKAYEAGSELGGWALGRW------TEEGID---------------INHN 142 (405)
T ss_pred HHhhhcCCHHHHHHHhcCeEEEEeeeCCchhhhhhhcCccccccccCcc------CCCCcc---------------ccCC
Confidence 99874 23 35899999999999999999999875 589999975 489999 9999
Q ss_pred CC----CCCCCCC---------CCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCCC--
Q psy15737 345 WG----FHWGGVG---------SSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNK-- 409 (444)
Q Consensus 345 f~----~~W~~~g---------~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~~-- 409 (444)
|| ++|+..+ ++.+||+++|+|+.|+|||||+||++|+.++ .|.+-.++|++..++.|||+++.
T Consensus 143 Fp~~~~~~W~~~~~~~~~~~~~~~~~Pc~~~Y~G~~~~sEPET~Av~~~i~~~--~FvLSanlHgG~lv~~YPyd~~~~~ 220 (405)
T cd03869 143 FPDLNTILWEAEDKKKVPRKVPNHHIPIPEWYLSENATVAPETRAVIAWMEKI--PFVLGANLQGGELVVSYPYDMTRTP 220 (405)
T ss_pred CcccccccccccccccccccccccCCCCccccCCCCCCCcHHHHHHHHHHHhC--CceEEEEecCccEEEEcCcccccCC
Confidence 99 5897542 4568999999999999999999999999998 78999999987777779999874
Q ss_pred ------CCCCCHHHHHHHHHHHHHHHHHhc
Q psy15737 410 ------KVPPDYADLDRVGRAAAEAMRVAG 433 (444)
Q Consensus 410 ------~~~~d~~~l~~la~~~a~ai~~~~ 433 (444)
..+||.+.+..||+.+|.+...++
T Consensus 221 ~~~~~~~~tpDd~~Fr~LA~~Ya~~h~~M~ 250 (405)
T cd03869 221 WATQEATPTPDDAVFRWLATSYASTHLLMT 250 (405)
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHhCHHhh
Confidence 357899999999999999877664
No 20
>cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally ac
Probab=100.00 E-value=3.9e-49 Score=403.74 Aligned_cols=201 Identities=24% Similarity=0.364 Sum_probs=184.9
Q ss_pred cCCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCC----CCCceEEEeccccCCCCccHHHHHHHHHHH
Q psy15737 196 KYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV----PNAKAFWIDGGIHAREWITPATVSFILSEL 271 (444)
Q Consensus 196 ~Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~----~~kp~v~i~~giHgrE~i~~~~~l~~i~~L 271 (444)
.||+|+||.+||++|+++||+++++.+||+|+|||+|++++||+++ ..||.|+++||||||||+|++++++|+++|
T Consensus 5 ~~h~y~ei~~~l~~l~~~~P~i~~l~~IG~S~eGR~I~~l~Is~~~~~~~~~kp~v~~~g~iHg~E~ig~~~~l~li~~L 84 (375)
T cd03863 5 RHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGIHEPGEPEFKYIGNMHGNEVVGRELLLNLIEYL 84 (375)
T ss_pred ccCCHHHHHHHHHHHHHHCCCcEEEEEcccCCccceEEEEEEecCCCcccCCCCeEEEEccccCCcHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999743 368999999999999999999999999999
Q ss_pred HHhchhcH---HhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCC
Q psy15737 272 VENREAQE---DYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFH 348 (444)
Q Consensus 272 ~~~~~~~~---~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~ 348 (444)
+++|..++ .+|++++|+|+|++|||||+++++++|+|||+|. +|.||| ||||||++
T Consensus 85 ~~~y~~d~~v~~ll~~~~i~IvP~~NPDG~e~~~~~~~~~~~~R~------n~~GVD---------------LNRNfp~~ 143 (375)
T cd03863 85 CKNFGTDPEVTDLVQSTRIHIMPSMNPDGYEKSQEGDRGGTVGRN------NSNNYD---------------LNRNFPDQ 143 (375)
T ss_pred HHhccCCHHHHHHHhCCEEEEEeccCCchHHheecCCcccccccc------cCCCcc---------------cccCCccc
Confidence 99887654 4899999999999999999999999999999865 478999 99999999
Q ss_pred CCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCC------CCCCCCHHHHHHHH
Q psy15737 349 WGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYN------KKVPPDYADLDRVG 422 (444)
Q Consensus 349 W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~------~~~~~d~~~l~~la 422 (444)
|... ...+||||+||++|+.++ +|.++++|||++++++||||++ ...+||.+.++.||
T Consensus 144 ~~~~--------------~~~~EpEt~Av~~~~~~~--~f~l~~~lHsg~~~~~yPy~~~~~~~~~~~~~pd~~~~~~la 207 (375)
T cd03863 144 FFQV--------------TDPPQPETLAVMSWLKSY--PFVLSANLHGGSLVVNYPFDDDEQGIAIYSKSPDDAVFQQLA 207 (375)
T ss_pred cccC--------------CCCCcHHHHHHHHHHhhC--CceEEEEecCCCEEEEccCcCCCcccccCCCCCCHHHHHHHH
Confidence 9632 235799999999999998 7999999999999999999997 46799999999999
Q ss_pred HHHHHHHHHhc
Q psy15737 423 RAAAEAMRVAG 433 (444)
Q Consensus 423 ~~~a~ai~~~~ 433 (444)
+.+|.|+..++
T Consensus 208 ~~~a~a~~~m~ 218 (375)
T cd03863 208 LSYSKENKKMY 218 (375)
T ss_pred HHHHHHHHHHh
Confidence 99999999887
No 21
>cd03866 M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPM is an extracellular glycoprotein, bound to cell membranes via a glycosyl-phosphatidylinositol on the C-terminus of the protein. It specifically removes C-terminal basic residues such as lysine and arginine from peptides and proteins. The highest levels of CPM have been found in human lung and placenta, but significant amounts are present in kidney, blood vessels, intestine, brain, and peripheral nerves. CPM has also been found in soluble form in various body fluids, including amniotic fluid, seminal plasma and urine. Due to its wide distribution in a variety of tissues, it is believed that it plays an important role in the cont
Probab=100.00 E-value=5.2e-48 Score=396.28 Aligned_cols=207 Identities=22% Similarity=0.370 Sum_probs=188.0
Q ss_pred cCCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCC----CCCceEEEeccccCCCCccHHHHHHHHHHH
Q psy15737 196 KYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV----PNAKAFWIDGGIHAREWITPATVSFILSEL 271 (444)
Q Consensus 196 ~Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~----~~kp~v~i~~giHgrE~i~~~~~l~~i~~L 271 (444)
.||+|+||.+||++|+++||+++++++||+|+|||+|++++||+++ ..+|.|+++||||||||+|++++++|+++|
T Consensus 4 ~Y~~~~ei~~~l~~l~~~~p~i~~l~~IG~S~eGR~i~~l~ig~~~~~~~~~~P~v~~~~~iHg~E~ig~~~~l~l~~~L 83 (376)
T cd03866 4 NYHNTEQMEAYLKDVNKNYPSITHLHSIGQSVEGRELWVLVLGRFPREHRIGIPEFKYVANMHGNEVVGRELLLHLIDYL 83 (376)
T ss_pred ccCCHHHHHHHHHHHHHhCCCcEEEEEeeccCCCceEEEEEeccCCccccCCCCeEEEEcccCCCcHHHHHHHHHHHHHH
Confidence 7999999999999999999999999999999999999999999753 358999999999999999999999999999
Q ss_pred HHhchhcH---HhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCC
Q psy15737 272 VENREAQE---DYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFH 348 (444)
Q Consensus 272 ~~~~~~~~---~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~ 348 (444)
+++|..++ .+|++++|+|+|++|||||++++ .+|+||++|. +|.||| ||||||++
T Consensus 84 ~~~y~~d~~i~~lL~~~~i~ivP~~NPDG~e~~~-~~~~~~~~R~------N~~GvD---------------LNRnf~~~ 141 (376)
T cd03866 84 VTSYGSDPVITRLLNSTRIHIMPSMNPDGFEASK-PDCYYSVGRY------NKNGYD---------------LNRNFPDA 141 (376)
T ss_pred HHhcCCCHHHHHHHhCCEEEEEeccCCchhhhcc-cccccccccc------cCCCcc---------------cCcCchhh
Confidence 99876654 58999999999999999999985 6899998864 588999 99999999
Q ss_pred CCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCC---------CCCCCCHHHHH
Q psy15737 349 WGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYN---------KKVPPDYADLD 419 (444)
Q Consensus 349 W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~---------~~~~~d~~~l~ 419 (444)
|+..+ ..|||||+||++|+++. +|.++++||+|+++++|||+++ ...+||...++
T Consensus 142 w~~~~--------------~~sepEt~al~~~~~~~--~~~l~~~~H~~~~~~~YP~~~~~~~~~~~~~~~~~pd~~~~~ 205 (376)
T cd03866 142 FEENN--------------EQRQPETRAVMEWLKSE--TFVLSANLHGGALVASYPYDNGNGGTGQQGYRSVSPDDDVFV 205 (376)
T ss_pred hccCC--------------CCCcHHHHHHHHHHHhc--CcEEEEEccCCceEEeccccCCCCccccccCCCCCCCHHHHH
Confidence 97431 23999999999999886 8999999999999999999997 34589999999
Q ss_pred HHHHHHHHHHHHhc-C------Ceeeee
Q psy15737 420 RVGRAAAEAMRVAG-G------GAYTFV 440 (444)
Q Consensus 420 ~la~~~a~ai~~~~-g------~~Y~~g 440 (444)
.||..+|.++.+++ | +.|.+|
T Consensus 206 ~la~~~a~~~~~~~~g~~~~~~~~~~~G 233 (376)
T cd03866 206 HLAKTYSYNHANMYKGNHCSDKQSFPSG 233 (376)
T ss_pred HHHHHHHHhCHHhhCCCCCCccccCCCC
Confidence 99999999999988 5 678888
No 22
>PF00246 Peptidase_M14: Zinc carboxypeptidase This is family M14 in the peptidase classification. ; InterPro: IPR000834 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of sequences contain a diverse range of gene families, which include metallopeptidases belonging to MEROPS peptidase family M14 (carboxypeptidase A, clan MC), subfamilies M14A and M14B. The carboxypeptidase A family can be divided into two subfamilies: carboxypeptidase H (regulatory) and carboxypeptidase A (digestive) []. Members of the H family have longer C-termini than those of family A [], and carboxypeptidase M (a member of the H family) is bound to the membrane by a glycosylphosphatidylinositol anchor, unlike the majority of the M14 family, which are soluble []. The zinc ligands have been determined as two histidines and a glutamate, and the catalytic residue has been identified as a C-terminal glutamate, but these do not form the characteristic metalloprotease HEXXH motif [, ]. Members of the carboxypeptidase A family are synthesised as inactive molecules with propeptides that must be cleaved to activate the enzyme. Structural studies of carboxypeptidases A and B reveal the propeptide to exist as a globular domain, followed by an extended alpha-helix; this shields the catalytic site, without specifically binding to it, while the substrate-binding site is blocked by making specific contacts [, ]. Other examples of protein families in this entry include: Intron maturase Putative mitochondrial processing peptidase alpha subunit Superoxide dismutase [Mn] (1.15.1.1 from EC) Asparagine synthetase [glutamine-hydrolysing] 3 (6.3.5.4 from EC) Glucose-6-phosphate isomerase (5.3.1.9 from EC) ; GO: 0004181 metallocarboxypeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 3DGV_A 3OSL_C 3D4U_A 2NSM_A 1QMU_A 1H8L_A 2PJ2_A 2PJ9_A 1ZG8_A 1Z5R_A ....
Probab=100.00 E-value=2.8e-47 Score=376.37 Aligned_cols=215 Identities=41% Similarity=0.810 Sum_probs=188.3
Q ss_pred HHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecC----CCCCceEEEeccccCCCCccHHHHHHHHHHHHHhc--h
Q psy15737 203 IHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSG----VPNAKAFWIDGGIHAREWITPATVSFILSELVENR--E 276 (444)
Q Consensus 203 i~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~----~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~--~ 276 (444)
|.+||+.|+++||++|++.+||+|++||+|++++|+++ ...||.|+|+||+||+||+|++++++|+++|+.++ .
T Consensus 1 i~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~k~~v~i~~~~Hg~E~~g~~~~l~~~~~L~~~~~~~ 80 (279)
T PF00246_consen 1 INAYLDALAARYPDIVRLESIGKSYEGRPIYALTIGSNSNGSDPGKPTVLIIAGIHGNEWIGSEALLYLIEELLSGYDDP 80 (279)
T ss_dssp HHHHHHHHHHHSTTTEEEEEEEE-TTS-EEEEEEESSSTTTTSTTSEEEEEEE-SSTT-THHHHHHHHHHHHHHHHTTSH
T ss_pred CHHHHHHHHHHCCCcEEEEEeeECCCCCeEEEEEeecccccccccccceEEEecccccccCchHHHHHHHHHhhccccch
Confidence 68999999999999999999999999999999999975 35799999999999999999999999999999964 2
Q ss_pred hcHHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCCCCC
Q psy15737 277 AQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSK 356 (444)
Q Consensus 277 ~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~ 356 (444)
....+|++++|+|||++||||+++.+..++.|+|||.+. .||| |||||++.|+..|++.
T Consensus 81 ~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~w~~~R~n~------~GvD---------------lNRnf~~~w~~~~~~~ 139 (279)
T PF00246_consen 81 EVKELLDNVVIYIIPMVNPDGYEYGTSGDRGWRKNRSNA------NGVD---------------LNRNFPYQWNEEGSSS 139 (279)
T ss_dssp HHHHHHHHEEEEEES-SSHHHHHHHHHT-TTCCSTSSBT------TS-----------------GGGSSSSSTTSSSSBS
T ss_pred hhhhhcccceEEEEeeecccceeeeeecccccccccccc------cccc---------------cccccCcccccccccC
Confidence 234589999999999999999999999999999998653 4888 9999999999888999
Q ss_pred CccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCCC-CCCCCHHHHHHHHHHHHHHHHHhc-C
Q psy15737 357 EQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNK-KVPPDYADLDRVGRAAAEAMRVAG-G 434 (444)
Q Consensus 357 ~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~~-~~~~d~~~l~~la~~~a~ai~~~~-g 434 (444)
.||++.|+|+.|||||||+||++++++. ++.+++|||++++.++|||+++. ..+++.+.+..++..++.++.... |
T Consensus 140 ~~~~~~y~g~~~~sepEt~al~~~~~~~--~~~~~id~H~~~~~~~~p~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~ 217 (279)
T PF00246_consen 140 NPCSETYRGPAPFSEPETRALRNLIQDW--NPDFFIDFHSGGNAILYPYGYSYDEPPPDADELRSLARAFAEALGSMSRG 217 (279)
T ss_dssp STTSTTB--SSTTTSHHHHHHHHHHHHT--TEEEEEEEEESSSEEEESESSSSTSSTTTHHHHHHHHHHHHHHHHCHTTT
T ss_pred CCCCcccCCCcchhhhHHHHHHHHHhhc--ceeEEEeccccccceeeecccccccCCchhhhhhHHHHHHHHHhhhcccc
Confidence 9999999999999999999999999996 99999999999999999999988 789999999999999999998754 4
Q ss_pred Cee-eee
Q psy15737 435 GAY-TFV 440 (444)
Q Consensus 435 ~~Y-~~g 440 (444)
..| .+|
T Consensus 218 ~~y~~~~ 224 (279)
T PF00246_consen 218 QNYDSYG 224 (279)
T ss_dssp TTBSEEE
T ss_pred ccccccC
Confidence 557 666
No 23
>cd06229 M14_Endopeptidase_I Peptidase M14-like domain of Gamma-D-glutamyl-L-diamino acid endopeptidase 1 (also known as Gamma-D-glutamyl-meso-diaminopimelate peptidase I, and Endopeptidase I (ENP1); EC 3.4.19.11). ENP1 is a member of the M14 family of metallocarboxypeptidases (MCPs). However it has an exceptional type of activity of hydrolyzing the gamma-D-Glu-(L)meso-diaminopimelic acid (gamma-D-Glu-Dap) bond of L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid and L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid(L)-D-Ala peptides. ENP1has a different substrate specificity and cellular role than MpaA (MpaA does not belong to this group). ENP1 hydrolyzes the gamma-D-Glu-Dap bond of MurNAc-tripeptide and MurNAc-tetrapeptide, as well as the amide bond of free tripeptide and tetrapeptide . ENP1 is active on spore cortex peptidoglycan, and is produced at stage IV of sporulation in forespore and spore integuments.
Probab=100.00 E-value=1.7e-46 Score=367.24 Aligned_cols=187 Identities=28% Similarity=0.472 Sum_probs=164.8
Q ss_pred ecCCceEEEEEeecCCCCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhc--------HHhhccceEEEEeecCCCC
Q psy15737 226 SLEGRPLRLVKISSGVPNAKAFWIDGGIHAREWITPATVSFILSELVENREAQ--------EDYIKKIDFYVLPITNPDG 297 (444)
Q Consensus 226 S~eGR~I~~l~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~--------~~lL~~~~~~IvP~~NPDG 297 (444)
|+|||+|++++||++. |+|||+||||||||+|+++++++|++|+..+..+ ..+|++++|+|||++||||
T Consensus 1 S~eGR~I~~~~ig~~~---~~v~i~agiHarE~~~~~~~l~~i~~L~~~~~~~~~~~~~~~~~lL~~~~i~ivP~~NPDG 77 (255)
T cd06229 1 SVLGRDIYEVKLGNGP---KTVFYNASFHAREWITTLLLMKFIEEYARAYENNEKLGGYDLRELLENVTICFVPMVNPDG 77 (255)
T ss_pred CCCCceeeEEEEcCCC---ceEEEECCccccchhhHHHHHHHHHHHHHHhccCccccchhHHHHHhcCeEEEEeCccCCc
Confidence 7899999999999764 8999999999999999999999999999987543 4689999999999999999
Q ss_pred ccccccc----------cccccccCCCCC-CCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCC-CCCCccccccCC
Q psy15737 298 YEYTHTT----------ERLWRKNRRKSP-KGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVG-SSKEQCQQIYAG 365 (444)
Q Consensus 298 y~~~~~~----------dr~WRKnr~~~~-~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g-~s~~pc~~~y~G 365 (444)
|+|++++ +++|||+|.+.. .+.+|.||| |||||+++|+..+ +|.+||+++|+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~GVD---------------LNRNf~~~w~~~~~~s~~p~~~~y~G 142 (255)
T cd06229 78 VEIVQNGPYAIRNYYLELLVINAGSINFKEWKANARGVD---------------LNRNFPAGWEKEKAGPKAPAPRNYKG 142 (255)
T ss_pred hheeeecccccccchhhhHHhhcCCCcccccccCCcccc---------------cCCCCCCCCCcCCCCCCCCCccCcCC
Confidence 9998875 568999987643 257899999 9999999999887 789999999999
Q ss_pred CCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCeeeeeccc
Q psy15737 366 TGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEAMRVAGGGAYTFVLMI 443 (444)
Q Consensus 366 ~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~~~~~~d~~~l~~la~~~a~ai~~~~g~~Y~~g~~~ 443 (444)
+.||||||||||++++.++ ++.++||+||+|++|+|||+... + .++.++|++|.+++| |.+|+..
T Consensus 143 ~~p~SEpEtral~~~~~~~--~~~~~i~~Hs~g~~i~~~~~~~~--~-------~~~~~~~~~~~~~~g--y~~~~~~ 207 (255)
T cd06229 143 EQPLSEPETIALAELTREN--RFRAVLAYHSQGEEIYWGYGGLE--P-------PESQKMAELLAEVSG--YELVDSE 207 (255)
T ss_pred CCCCCchhHHHHHHHHHhC--CCeEEEEecCCCCeEEecCCCCC--c-------hHHHHHHHHHhhccC--Ccccccc
Confidence 9999999999999999998 79999999999999999987432 2 456788999999888 7777653
No 24
>cd03864 M14_CPN Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3.4.17.3) is an extracellular glycoprotein synthesized in the liver and released into the blood, where it is present in high concentrations. CPN belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPN plays an important role in protecting the body from excessive buildup of potentially deleterious peptides that normally act as local autocrine or paracrine hormones. It specifically removes C-terminal basic residues. As CPN can cleave lysine more avidly than arginine residues it is also called lysine carboxypeptidase. CPN substrates inclu
Probab=100.00 E-value=4.5e-42 Score=353.30 Aligned_cols=214 Identities=23% Similarity=0.314 Sum_probs=177.0
Q ss_pred CCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCC----CCCceEEEeccccCCCCccHHHHHHHHHHHH
Q psy15737 197 YHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV----PNAKAFWIDGGIHAREWITPATVSFILSELV 272 (444)
Q Consensus 197 Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~----~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~ 272 (444)
||+|+||.++|++|+++||+++++.+||+|+|||+|++++||+++ ..||.|+++|+||||||+|++++++|++.|+
T Consensus 1 ~h~y~em~~~L~~l~~~yP~i~~l~sIG~SveGR~i~~l~is~~~~~~~~~kp~v~~~g~iHg~E~ig~e~ll~l~~~L~ 80 (392)
T cd03864 1 HHRYDDLVRALYAVQNECPYITRIYSIGRSVEGRHLYVLEFSDNPGIHEPLEPEFKYVGNMHGNEVLGRELLIQLSEFLC 80 (392)
T ss_pred CCCHHHHHHHHHHHHHHCCCeEEEEEeeeccCCceEEEEEecCCCccccCCCCEEEEEcccCCCcHHHHHHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999864 2589999999999999999999999999999
Q ss_pred Hhchh-c---HHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCC
Q psy15737 273 ENREA-Q---EDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFH 348 (444)
Q Consensus 273 ~~~~~-~---~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~ 348 (444)
++|.. + .++|++++|+|||++|||||+++...++-++... .++.+|.||| ||||||..
T Consensus 81 ~~y~~~d~~v~~lL~~~~i~ivP~~NPDG~e~~~~~~~~~~~~~---~~R~Na~GVD---------------LNRNFp~~ 142 (392)
T cd03864 81 EEYRNGNERITRLIQDTRIHILPSMNPDGYEVAARQGPEFNGYL---VGRNNANGVD---------------LNRNFPDL 142 (392)
T ss_pred HhcccCCHHHHHHHhcCeEEEEeeeCCchHHhhhccCCCcCccc---cccccccCcc---------------cccCCCcc
Confidence 98753 3 4589999999999999999999865332111000 0133455555 99999965
Q ss_pred CC------C-CCC-CCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCCC-----------
Q psy15737 349 WG------G-VGS-SKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNK----------- 409 (444)
Q Consensus 349 W~------~-~g~-s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~~----------- 409 (444)
|. . .|. ...||.+.| .+++||||+||++|++++ .|.++++||+++.++.|||+++.
T Consensus 143 ~~~~~~~~~~~g~~~~~P~~~~~---~~~~epET~Av~~~~~~~--~fvls~nlHgG~~v~~YPyd~~~~~~~~~~~~~~ 217 (392)
T cd03864 143 NTLMYYNEKYGGPNHHLPLPDNW---KSQVEPETLAVIQWMQNY--NFVLSANLHGGAVVANYPYDKSREPRVRGFRRTA 217 (392)
T ss_pred cccchhhhccCCccccCCCcccc---ccccCHHHHHHHHHHHhc--CcEEEEEccCCceeeeCCcccccccccccccccc
Confidence 42 1 121 245887766 578999999999999998 89999999999999999999873
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHHhc
Q psy15737 410 -KVPPDYADLDRVGRAAAEAMRVAG 433 (444)
Q Consensus 410 -~~~~d~~~l~~la~~~a~ai~~~~ 433 (444)
..+||.+.++.||..+|.+...++
T Consensus 218 ~~~tpDd~~f~~la~~ya~~h~~m~ 242 (392)
T cd03864 218 YSPTPDDKLFQKLAKTYSYAHGWMH 242 (392)
T ss_pred cCCCCChHHHHHHHHHHHHhCCccc
Confidence 358999999999999998765553
No 25
>cd03865 M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3.4.17.10) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPE is an important enzyme responsible for the proteolytic processing of prohormone intermediates (such as pro-insulin, pro-opiomelanocortin, or pro-gonadotropin-releasing hormone) by specifically removing C-terminal basic residues. In addition, it has been proposed that the regulated secretory pathway (RSP) of the nervous and endocrine systems utilizes membrane-bound CPE as a sorting receptor. A naturally occurring point mutation in CPE reduces the stability of the enzyme and causes its degradation, leading to an accumulation of numerous neuroendocrine pe
Probab=100.00 E-value=3.4e-41 Score=346.36 Aligned_cols=215 Identities=23% Similarity=0.347 Sum_probs=181.9
Q ss_pred cCCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCC----CCCceEEEeccccCCCCccHHHHHHHHHHH
Q psy15737 196 KYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV----PNAKAFWIDGGIHAREWITPATVSFILSEL 271 (444)
Q Consensus 196 ~Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~----~~kp~v~i~~giHgrE~i~~~~~l~~i~~L 271 (444)
.||+|+||.+||++|+++||+++++.+||+|+|||+|++++||+++ +.||.|+++|+||||||+|++++++++++|
T Consensus 4 ~Yh~y~e~~~~L~~l~~~~p~i~~l~~IG~S~eGR~I~~l~Is~~~~~~~~~kP~v~i~g~iHg~E~ig~~~~l~l~~~L 83 (402)
T cd03865 4 EYHRYPELREALVSVWLQCPSISRIYTVGRSFEGRELLVIEMSDNPGEHEPGEPEFKYIGNMHGNEAVGRELLIYLAQYL 83 (402)
T ss_pred ccCCHHHHHHHHHHHHHHCCCceEEEecccccCCCeEEEEEeecCCCCCCCCCCEEEEECCcCCCcHHHHHHHHHHHHHH
Confidence 6999999999999999999999999999999999999999998643 368999999999999999999999999999
Q ss_pred HHhchh-c---HHhhccceEEEEeecCCCCcccccc---ccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCC
Q psy15737 272 VENREA-Q---EDYIKKIDFYVLPITNPDGYEYTHT---TERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRN 344 (444)
Q Consensus 272 ~~~~~~-~---~~lL~~~~~~IvP~~NPDGy~~~~~---~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRN 344 (444)
+++|.. + .++|++++|+|+|++|||||+++.+ ..++|+|+|. +|.||| ||||
T Consensus 84 ~~~y~~~d~~v~~LLd~~~i~IvP~~NPDG~e~~~~~~~~~~~w~~~R~------Na~GvD---------------LNRN 142 (402)
T cd03865 84 CNEYQKGNETIINLIHSTRIHIMPSLNPDGFEKAASQPGELKDWFVGRS------NAQGID---------------LNRN 142 (402)
T ss_pred HHhcccCCHHHHHHHhcCEEEEEeeeCCchHHhhhhcCccccchhhhcc------cccCcc---------------cCCC
Confidence 998743 3 4599999999999999999998764 3478998864 588999 9999
Q ss_pred CCCCCCC------CCCCCCccccccCCCC---CCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCCC------
Q psy15737 345 WGFHWGG------VGSSKEQCQQIYAGTG---PFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNK------ 409 (444)
Q Consensus 345 f~~~W~~------~g~s~~pc~~~y~G~~---p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~~------ 409 (444)
||..+.. .|.+.++-...++++. ...||||+|+++|+++. .|++-.+||++.-+..|||+.+.
T Consensus 143 Fp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pEt~Avm~w~~~~--~FvlsanlHgG~lva~YP~D~~~~~~~~~ 220 (402)
T cd03865 143 FPDLDRIVYVNEREGGPNNHLLKNMKKAVDENTKLAPETKAVIHWIMDI--PFVLSANLHGGDLVANYPYDETRSGSAHE 220 (402)
T ss_pred CCcccchhhhhhccCCCccccccccccccccccCCChHHHHHHHHHHhC--CcEEEEEccCccEEEECCCCCCCCCCccc
Confidence 9964321 2223333333333432 24689999999999998 89999999999999999999873
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHHhc
Q psy15737 410 -KVPPDYADLDRVGRAAAEAMRVAG 433 (444)
Q Consensus 410 -~~~~d~~~l~~la~~~a~ai~~~~ 433 (444)
+.+||.+.+..||...|.+...++
T Consensus 221 ~s~~pDd~~f~~lA~~Ya~~h~~m~ 245 (402)
T cd03865 221 YSACPDDAIFKSLARAYSSLNPAMS 245 (402)
T ss_pred ccCCCChHHHHHHHHHHHhhCHHhh
Confidence 468999999999999998876664
No 26
>cd03862 Peptidase_M14-like_7 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=100.00 E-value=9.3e-40 Score=321.67 Aligned_cols=183 Identities=24% Similarity=0.326 Sum_probs=158.6
Q ss_pred CCceEEEEEeecCCCCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhc---HHhhccceEEEEeecCCCCccccccc
Q psy15737 228 EGRPLRLVKISSGVPNAKAFWIDGGIHAREWITPATVSFILSELVENREAQ---EDYIKKIDFYVLPITNPDGYEYTHTT 304 (444)
Q Consensus 228 eGR~I~~l~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~---~~lL~~~~~~IvP~~NPDGy~~~~~~ 304 (444)
.+.||++++|+++..++|+|+|+||+|||||+|++++++|+++|+..+..+ .++|++++|+|||++||||
T Consensus 8 ~~~pi~~v~ig~~~~~~p~v~i~~giHg~E~ig~~~~l~~l~~L~~~~~~d~~~~~ll~~~~i~ivP~vNPdG------- 80 (273)
T cd03862 8 LRFPIYALELGSPDPKAPVLGLVGGVHGLERIGTQVLLAFLESLLERLRWDKLLQELLEKVRLVFLPLVNPVG------- 80 (273)
T ss_pred CcceeEEEEecCCCCCCCEEEEEcCcCCCcHHHHHHHHHHHHHHHHhccccHHHHHHHhCCeEEEEeccCcCH-------
Confidence 368999999998777889999999999999999999999999999987655 4589999999999999999
Q ss_pred cccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCC------CCCCCCCccccccCCCC-CCCHHHHHHH
Q psy15737 305 ERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWG------GVGSSKEQCQQIYAGTG-PFSEPETQAV 377 (444)
Q Consensus 305 dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~------~~g~s~~pc~~~y~G~~-p~SepEtral 377 (444)
+|||+|. +|.||| ||||||+.|+ ..|++.+||+++|+|+. |+|||||+||
T Consensus 81 --~~~~~R~------n~~GVD---------------LNRNfp~~~~~~~~~~~~G~~~~p~~~~Y~G~~~~~sEpEt~al 137 (273)
T cd03862 81 --MALKTRS------NGNGVD---------------LMRNAPVDAEDKPPFLVGGQRLSPRLPWYRGKNGAGMELEAQAL 137 (273)
T ss_pred --HHhcccC------CCCCcc---------------cCCCCCCCccccccccccCccCCCCCCCCCCCCCCCCCHHHHHH
Confidence 4888875 356899 9999999987 35788899999999997 9999999999
Q ss_pred HHHHHHh--CCCeeEEEEeCCC---CCcccccCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCeeeeeccc
Q psy15737 378 SRFILAN--NANMKAFVTFHSY---GQYILYPWGYNKKVPPDYADLDRVGRAAAEAMRVAGGGAYTFVLMI 443 (444)
Q Consensus 378 ~~~i~~~--~~~~~~~idlHs~---g~~ilyP~g~~~~~~~d~~~l~~la~~~a~ai~~~~g~~Y~~g~~~ 443 (444)
++++++. ..++.+|||+||+ ++.|+|||+|+...+++.+++..++..+.++ ..++.|++|+++
T Consensus 138 ~~~~~~~~~~~~~~~~ld~HSg~G~~~~i~~Pyg~~~~~~~~~~~~~~l~~~~~~~---~~~~~Y~~g~~s 205 (273)
T cd03862 138 CRFVRELLFESPFSIALDCHSGFGLVDRIWFPYAYTKEPIPHLAEIYALKELLERT---YPNHVYRFEPQS 205 (273)
T ss_pred HHHHHHhcccCCeEEEEEECCCCCccCEEEcCCcCCCCCCCCHHHHHHHHHHHHHh---CCCCceEECCcc
Confidence 9999986 4589999999994 4899999999988888999999887654322 235689999875
No 27
>cd06237 M14_Nna1_like_3 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP),-like proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.
Probab=100.00 E-value=1.8e-38 Score=308.30 Aligned_cols=188 Identities=22% Similarity=0.365 Sum_probs=155.7
Q ss_pred CCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCCCCCceEEEeccccCCCCccHHHHHHHHHHHHHhch
Q psy15737 197 YHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAKAFWIDGGIHAREWITPATVSFILSELVENRE 276 (444)
Q Consensus 197 Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~ 276 (444)
-.+.++|.+||+.|++. +++++.+||+|+|||||++++|++++ .||+|||.||+||+||+|+.++++|+++|+++..
T Consensus 7 ~~~~~~i~~~l~~L~~~--~~v~~~~iG~S~eGR~i~~l~ig~~~-~k~~v~i~~~iH~~E~~g~~~~~~~~~~l~~~~~ 83 (244)
T cd06237 7 LIDNQDVKDWVDSLIKQ--PFVELELLGLSTQGRPLKALERGNPD-SKEWIVVISRQHPPEVTGALAMKAFIETLLSDSE 83 (244)
T ss_pred eCCHHHHHHHHHHHhcC--CCeEEEEeeEcCCCCEEEEEEecCCC-CCceEEEEcCcCCCcHHHHHHHHHHHHHHHhCCH
Confidence 46789999999999755 68999999999999999999998764 6899999999999999999999999999998644
Q ss_pred hcHHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCCCCC
Q psy15737 277 AQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSK 356 (444)
Q Consensus 277 ~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~ 356 (444)
....+|++++|+|||++||||+++. .||+|+ .||| |||||+
T Consensus 84 ~~~~ll~~~~i~ivP~~NPDG~~~~-----~wR~N~---------~GvD---------------LNRnw~---------- 124 (244)
T cd06237 84 LAKKFRAKYNVLLVPNMNPDGVDLG-----HWRHNA---------NGID---------------LNRDWS---------- 124 (244)
T ss_pred HHHHHHHhCEEEEEEeeCcchhhcC-----CccCCC---------CCcC---------------CCCCCC----------
Confidence 3467999999999999999999974 388875 3888 999985
Q ss_pred CccccccCCCCCCCHHHHHHHHHHHHHh---CCCeeEEEEeCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHHHHHhc
Q psy15737 357 EQCQQIYAGTGPFSEPETQAVSRFILAN---NANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEAMRVAG 433 (444)
Q Consensus 357 ~pc~~~y~G~~p~SepEtral~~~i~~~---~~~~~~~idlHs~g~~ilyP~g~~~~~~~d~~~l~~la~~~a~ai~~~~ 433 (444)
++|||||+|+++++.+. +.++.++|||||+++.++|||++....... .++..++.++.+.+
T Consensus 125 -----------~~sepEt~a~~~~~~~~~~~~~~~~~~id~Hs~~~~i~~~~~~~~~~~~p-----~~~~~~~~~l~~~~ 188 (244)
T cd06237 125 -----------NFNQPETRAIRDYLVRLVKEGGKIVFALDFHSTWHDVFYTMPEDYKLQFP-----GFVADWLKELDKRI 188 (244)
T ss_pred -----------CCCCHHHHHHHHHHHHHhccCCCEEEEEEeccCCcceEecCCCCCCcccc-----hHHHHHHHHhcCcC
Confidence 67999999999999875 458999999999999999999875432111 12334555565443
Q ss_pred CCeeeeeccc
Q psy15737 434 GGAYTFVLMI 443 (444)
Q Consensus 434 g~~Y~~g~~~ 443 (444)
+.|++|+++
T Consensus 189 -~~Y~~~~~~ 197 (244)
T cd06237 189 -LDYKVNNRS 197 (244)
T ss_pred -CCceecccc
Confidence 568877654
No 28
>cd06234 M14_Nna1_like_1 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP)-like proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.
Probab=100.00 E-value=4.2e-38 Score=308.25 Aligned_cols=190 Identities=22% Similarity=0.365 Sum_probs=165.8
Q ss_pred cccccCCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCCCCCceEEEeccccCCCCccHHHHHHHHHHH
Q psy15737 192 MTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAKAFWIDGGIHAREWITPATVSFILSEL 271 (444)
Q Consensus 192 ~~~~~Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L 271 (444)
|.|-.-++|+++.+||+.+++. ..+++.+||+|+|||+|++|+|+++..+||+|||+||+||+|+++..++..++++|
T Consensus 5 ~ay~~Pys~~~~~~~l~~~~~~--~~v~~~~iG~S~eGR~i~~l~I~~~~~~k~~V~i~a~iH~~E~~g~~~~~~ll~~L 82 (263)
T cd06234 5 FAYFAPYSYERHLALIARAQGA--PDVRLEVLGQTVQGRDIDLLTFGEPGPGKKKLWIIARQHPGETMAEWFMEGLLERL 82 (263)
T ss_pred EEEeCCCCHHHHHHHHHHHhcC--CCeEEEEEEEcCCCCeEEEEEEccCCCCCCEEEEECCCCCCcHHHHHHHHHHHHHH
Confidence 4455678999999999999873 37999999999999999999999866689999999999999999999999999999
Q ss_pred HHhchh-cHHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCC
Q psy15737 272 VENREA-QEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWG 350 (444)
Q Consensus 272 ~~~~~~-~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~ 350 (444)
+..... ...+|++++|+|||++||||++++++ +.+|.|+| |||||+
T Consensus 83 ~~~~d~~~~~ll~~~~~~IvP~~NPDG~~~g~~--------------R~n~~GvD---------------LNRnw~---- 129 (263)
T cd06234 83 LDPDDAVARALLEKAVFYVVPNMNPDGSARGHL--------------RTNAAGAN---------------LNREWA---- 129 (263)
T ss_pred hhcCCHHHHHHHhcCEEEEEeeecchhhhhcCC--------------ccCCCCCC---------------CCCCCC----
Confidence 985433 35699999999999999999998642 45699999 999996
Q ss_pred CCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCC--CCCCCCH-HHHHHHHHHHHH
Q psy15737 351 GVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYN--KKVPPDY-ADLDRVGRAAAE 427 (444)
Q Consensus 351 ~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~--~~~~~d~-~~l~~la~~~a~ 427 (444)
|+.|+|+|||++|++++.+. ++.+|||||+++++ ||+|. ...+|++ ..+..++..+++
T Consensus 130 --------------~p~~~s~PEt~av~~~~~~~--~~~~~ld~Hs~~~~---py~f~~g~~~~p~~~~~l~~l~~~~~~ 190 (263)
T cd06234 130 --------------EPSAERSPEVFAVRQRMEET--GVDFFLDVHGDEAL---PYNFIAGSEGVPGWTPRLAALEARFKA 190 (263)
T ss_pred --------------CCCCCCCHHHHHHHHHHHhc--CCeEEEEeCCCCCC---CccEeccCCCCCCccHHHHHHHHHHHH
Confidence 56789999999999999986 79999999999996 99987 4445555 699999999999
Q ss_pred HHHHhcCC
Q psy15737 428 AMRVAGGG 435 (444)
Q Consensus 428 ai~~~~g~ 435 (444)
+|.++++.
T Consensus 191 al~~~~~~ 198 (263)
T cd06234 191 ALLRASPD 198 (263)
T ss_pred HHHHhCcc
Confidence 99998764
No 29
>cd06908 M14_AGBL4_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-4, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL4 and the mouse cytosolic carboxypeptidase (CCP)-6. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal
Probab=100.00 E-value=5.9e-38 Score=306.72 Aligned_cols=175 Identities=22% Similarity=0.343 Sum_probs=152.8
Q ss_pred HHHHHHhCCceEEEEeeeeecCCceEEEEEeecCC-----CCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHh
Q psy15737 207 LDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV-----PNAKAFWIDGGIHAREWITPATVSFILSELVENREAQEDY 281 (444)
Q Consensus 207 l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~-----~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~l 281 (444)
|+.|+++||+++++.+||+|+|||+|++|+|+++. .+||+|||+|++|||||+|+.+++++|++|+.+......+
T Consensus 1 l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~It~~~~~~~~~~k~~I~i~ariHp~E~~~s~~~~~li~~L~~~~~~~~~L 80 (261)
T cd06908 1 LDALEKRSLDYFRREQLGQSVQKRRLDLLTIDSPDNLREDSEKKVIFITARVHPGESPSSYVCQGLIDFLVSNHPIAKVL 80 (261)
T ss_pred ChHHHhhCCCcEEEEEeEEcCCCCeeEEEEEcCCCccccCCCCcEEEEECCcCCCChHHHHHHHHHHHHHhhCCHHHHHH
Confidence 46789999999999999999999999999999753 4689999999999999999999999999999874444669
Q ss_pred hccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCcccc
Q psy15737 282 IKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQ 361 (444)
Q Consensus 282 L~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~~pc~~ 361 (444)
+++++|+||||+||||+++++. +.+|.|+| |||||+
T Consensus 81 ~~~~~~~IvP~~NPDGv~~gn~--------------R~~~~G~D---------------LNR~w~--------------- 116 (261)
T cd06908 81 REHLVFKIVPMLNPDGVFLGNY--------------RCSLMGHD---------------LNRHWH--------------- 116 (261)
T ss_pred HHhCcEEEEeeecCcceeecCC--------------cCcCcCcC---------------CCCCCC---------------
Confidence 9999999999999999998631 56799999 999996
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHhC----CCeeEEEEeCCCCCcc-cccCCCCCCCCCCHHHHHHHHHHHHHH
Q psy15737 362 IYAGTGPFSEPETQAVSRFILANN----ANMKAFVTFHSYGQYI-LYPWGYNKKVPPDYADLDRVGRAAAEA 428 (444)
Q Consensus 362 ~y~G~~p~SepEtral~~~i~~~~----~~~~~~idlHs~g~~i-lyP~g~~~~~~~d~~~l~~la~~~a~a 428 (444)
++.|+++||++++++++.+.. .++.+|||||++++.+ +||||++...++++.....+...++..
T Consensus 117 ---~p~~~~~PEv~av~~~i~~~~~~~~~~i~~~lD~H~hs~~~~~F~yG~~~~~~~~~~~~~~fp~~l~~~ 185 (261)
T cd06908 117 ---DPSPWAHPTLHAVKNLLKELDNDSTTQLDFYIDLHAHSSLMNCFIYGNTYDDVYRYERQLVFPKLLAQN 185 (261)
T ss_pred ---CCCcccChHHHHHHHHHHHhhhccccCeeEEEEeeccccccceeeccccCCccccHHHHHHHHHHHHHh
Confidence 577999999999999998862 4899999999999998 899999987777777666655554444
No 30
>cd03856 M14_Nna1_like Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subfamily includes the human AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. M
Probab=100.00 E-value=1.2e-36 Score=299.51 Aligned_cols=194 Identities=19% Similarity=0.250 Sum_probs=166.8
Q ss_pred CCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCCCCCceEEEeccccCCCCccHHHHHHHHHHHHHhch
Q psy15737 197 YHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAKAFWIDGGIHAREWITPATVSFILSELVENRE 276 (444)
Q Consensus 197 Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~ 276 (444)
-.+|.+...+++.++ |+.|++.+||+|++||||++++++.+ ..||+|||+|++||+||+|+.++++++++|+++..
T Consensus 10 ~~~y~~~~~l~~sl~---~~~v~l~~IG~s~egr~i~~~~~~~~-~~k~~i~i~a~iH~~E~~~~~~~~~li~~Ll~~~~ 85 (269)
T cd03856 10 NQIYDRRLALCESLQ---GNSCDLLTITSPPEGNDIKYEHLCSF-ANKKYIFLIARVHPGETNASWVMKGFLEFLLSDNP 85 (269)
T ss_pred CcCHHHHHHHHHHhc---CCceeEEEeccCCCCccccceeccCC-CCCcEEEEEcCcCCCchHHHHHHHHHHHHHHhCCH
Confidence 456677777777775 77899999999999999999999765 47899999999999999999999999999998755
Q ss_pred hcHHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCCCCC
Q psy15737 277 AQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSK 356 (444)
Q Consensus 277 ~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~ 356 (444)
....+|++++|+||||+||||+++.+ ||+ +|.|+| |||||+
T Consensus 86 ~~~~ll~~~~~~ivP~~NPDG~~~g~-----~R~---------n~~G~D---------------LNR~~~---------- 126 (269)
T cd03856 86 TAQSLRESFVFKIVPMLNPDGVIRGN-----YRC---------SLSGVD---------------LNRQWQ---------- 126 (269)
T ss_pred HHHHHHhcCeEEEEeeeCCccccccC-----CcC---------CCCCCC---------------cCCCCC----------
Confidence 45679999999999999999999754 665 488999 999996
Q ss_pred CccccccCCCCCCCHHHHHHHHHHHHHh---CCCeeEEEEeCCCC---CcccccCCCCCCCCCCHHHHHHHHHH--HHHH
Q psy15737 357 EQCQQIYAGTGPFSEPETQAVSRFILAN---NANMKAFVTFHSYG---QYILYPWGYNKKVPPDYADLDRVGRA--AAEA 428 (444)
Q Consensus 357 ~pc~~~y~G~~p~SepEtral~~~i~~~---~~~~~~~idlHs~g---~~ilyP~g~~~~~~~d~~~l~~la~~--~a~a 428 (444)
||.++++||++++++++.++ +.++.+|||||+++ ++++ ||++...+++...+..++.. +..+
T Consensus 127 --------~p~~~~~pE~~~~~~~~~~~~~~~~~~~~~idlH~~~~~~~~f~--yG~~~~~~~~~~~~~~~~~~~~~~~~ 196 (269)
T cd03856 127 --------NPSPDLHPEIYLVKGLMLYLAAGKRGVLFYCDFHGHSRKKNVFM--YGCSFKDEVWDQGYRIIPKMLSQNAP 196 (269)
T ss_pred --------CCCCCCCCCHHHHHHHHHHHHhccCCceEEEEecCCCccCceEe--ecCCCchhhhhhHHHHHHHHHHhhCh
Confidence 57799999999999999987 56899999999999 6777 78777667777777777765 7778
Q ss_pred HHHhcCCeeeeeccc
Q psy15737 429 MRVAGGGAYTFVLMI 443 (444)
Q Consensus 429 i~~~~g~~Y~~g~~~ 443 (444)
+.+.+|+.|++|++.
T Consensus 197 ~~~~~~~~f~~~~~~ 211 (269)
T cd03856 197 LFCMFGCSFKVEKSK 211 (269)
T ss_pred hhhhcCCCcCCCcCC
Confidence 888999999998764
No 31
>cd06238 Peptidase_M14-like_1_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T
Probab=100.00 E-value=5.3e-36 Score=294.73 Aligned_cols=183 Identities=23% Similarity=0.365 Sum_probs=155.5
Q ss_pred eeeecCCceEEEEEeecCC--------------------------CCCceEEEeccccCCCCccHHHHHHHHHHHHHhch
Q psy15737 223 IGRSLEGRPLRLVKISSGV--------------------------PNAKAFWIDGGIHAREWITPATVSFILSELVENRE 276 (444)
Q Consensus 223 iG~S~eGR~I~~l~Is~~~--------------------------~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~ 276 (444)
+|+|+|||||.++.|++.. ..+|+|||+||||||||+|++++++++++|++..+
T Consensus 1 ~G~s~egR~l~~~~I~s~~n~~~l~~~~~~~~~la~p~~~~~~~~~~~~~v~i~~~iH~~E~~g~~~~l~l~~~L~~~~~ 80 (271)
T cd06238 1 YGRTHEGRPLLLATITSPENIARLDQIREDHLALADPAATSSLISDQPVVVWLGYSVHGNEISGTEAALLTAYHLAAAQG 80 (271)
T ss_pred CCcCCCCCeeEEEEEeCHHHHHhHHHHHHHHHHhcCccccccccccCCcEEEEECCcCCCChHHHHHHHHHHHHHHHcCC
Confidence 6999999999999998642 14789999999999999999999999999998754
Q ss_pred hc-HHhhccceEEEEeecCCCCcc-ccc----------cccccccccCCCCC-CCCCCccccCCCCCCCccccCCCCCCC
Q psy15737 277 AQ-EDYIKKIDFYVLPITNPDGYE-YTH----------TTERLWRKNRRKSP-KGDSCSGIDLVTYDSDEEDEKTIDLNR 343 (444)
Q Consensus 277 ~~-~~lL~~~~~~IvP~~NPDGy~-~~~----------~~dr~WRKnr~~~~-~~~~c~GvD~~~~d~~~~~~~gvDLNR 343 (444)
.. .++|++++|+|+|++||||++ +++ +.|++|||++.+-. ++.+|.|+| |||
T Consensus 81 ~~~~~ll~~~~i~i~P~~NPDG~~r~~~w~~~~~~~~~~~d~~~r~~~~~wp~~R~n~~g~D---------------LNR 145 (271)
T cd06238 81 DEIEALLDNAVVLIDPMQNPDGRDRFVNWYNSNRGMVPSADPQDREHNEPWPGGRTNHYWFD---------------LNR 145 (271)
T ss_pred HHHHHHHhcCEEEEEeccCCCHHHHHHHhhhhccCCccccchhhhhcccCCccccccccCcc---------------ccc
Confidence 33 569999999999999999999 454 67899999886432 367888888 999
Q ss_pred CCCCCCCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCC---Cccccc---CCCC-CCCCCCHH
Q psy15737 344 NWGFHWGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYG---QYILYP---WGYN-KKVPPDYA 416 (444)
Q Consensus 344 Nf~~~W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g---~~ilyP---~g~~-~~~~~d~~ 416 (444)
||. ++|+||||++++++.++ ++.+++|||++| +++++| +++. ...|.+.+
T Consensus 146 D~~---------------------~~s~pEtra~~~~~~~~--~p~~~~D~H~~g~~~~~~~~P~~~~~~np~~~p~~~~ 202 (271)
T cd06238 146 DWL---------------------PLTQPESRGRLAAYHEW--RPNVVVDFHEMGTNSTYFFAPGAPPRTNPLTPDQNRD 202 (271)
T ss_pred ccc---------------------cccCHHHHHHHHHHHhc--CCeEEEEeccCCCccceEEeCCCCccCCCCCCHHHHH
Confidence 996 67999999999999998 679999999998 677778 5555 34566788
Q ss_pred HHHHHHHHHHHHHHHhcCCeeeeecccC
Q psy15737 417 DLDRVGRAAAEAMRVAGGGAYTFVLMIK 444 (444)
Q Consensus 417 ~l~~la~~~a~ai~~~~g~~Y~~g~~~~ 444 (444)
.+..+|..++++|.+. |..|.+|...|
T Consensus 203 ~~~~~g~~~~~al~~~-G~~Y~t~~~~d 229 (271)
T cd06238 203 LTATIGRNHAKAFDEI-GWLYFTREVFD 229 (271)
T ss_pred HHHHHHHHHHHHHHhc-CCcEEeccccc
Confidence 8899999999999877 99999987654
No 32
>cd06242 Peptidase_M14-like_1_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=100.00 E-value=7.4e-34 Score=279.65 Aligned_cols=182 Identities=24% Similarity=0.379 Sum_probs=151.0
Q ss_pred CCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCC-----CCCceEEEeccccCCCCccHHHHHHHHHHH
Q psy15737 197 YHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV-----PNAKAFWIDGGIHAREWITPATVSFILSEL 271 (444)
Q Consensus 197 Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~-----~~kp~v~i~~giHgrE~i~~~~~l~~i~~L 271 (444)
+.+|+||.+||+.|++++|.+.++.+||+|+|||||++++|+++. ..||+|||+|||||+||+|++++++++++|
T Consensus 2 ~t~y~e~~~~l~~La~~~~~i~~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~V~i~~giHg~E~~g~~a~l~ll~~L 81 (268)
T cd06242 2 PTSHEEMESFMKSLASKNDWMSYHSDIGKSEEGRSIPYVYLSTSKSSSSSSKKLRVWLQGGVHGNEPAGDEAALALLGKL 81 (268)
T ss_pred CCCHHHHHHHHHHHHHHCCCeEEEEECccccCCceeEEEEEecCCccccCCCCCEEEEECCcCCCCHHHHHHHHHHHHHH
Confidence 578999999999999999987779999999999999999999763 468999999999999999999999999999
Q ss_pred HHhchhcHHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCC
Q psy15737 272 VENREAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGG 351 (444)
Q Consensus 272 ~~~~~~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~ 351 (444)
+.+.. ..++|++++|+|+|++||||+++.+ +.+|.|+| |||||.
T Consensus 82 ~~~~~-~~~lL~~~~i~ivP~~NPDG~~~~~---------------R~na~g~D---------------lNRD~~----- 125 (268)
T cd06242 82 DNNPK-WASVLEKIDIIVLPRYNPDGSAYFQ---------------RTLATGYD---------------PNRDHT----- 125 (268)
T ss_pred HhCch-HHHHHhcCeEEEEeccCcchhhhcc---------------ccCCcCcc---------------cCCCCC-----
Confidence 98642 3479999999999999999998743 45688999 999995
Q ss_pred CCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccc---c------CC----CC--CCCCCCHH
Q psy15737 352 VGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILY---P------WG----YN--KKVPPDYA 416 (444)
Q Consensus 352 ~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ily---P------~g----~~--~~~~~d~~ 416 (444)
++++||++++++++.++ ++.++||+|++++...| | |+ +. ...|+...
T Consensus 126 ----------------~~~~pEtra~~~~~~~~--~P~v~iD~He~~~~~~~~~~~~~~~~~~D~~~~~~~n~n~~~~~~ 187 (268)
T cd06242 126 ----------------KLARQQTRDIKEAFSKF--NPHIAIDAHEYGAFRRFGARYGGAGLYHDGLFSAAKNLNIPKNIR 187 (268)
T ss_pred ----------------cccCHHHHHHHHHHHHh--CCcEEEEeccCCccccchhccCccccccchhhcccCCCCCChHHH
Confidence 56899999999999998 67889999999986322 2 11 12 12344444
Q ss_pred H-HHH-HHHHHHHHHHHh
Q psy15737 417 D-LDR-VGRAAAEAMRVA 432 (444)
Q Consensus 417 ~-l~~-la~~~a~ai~~~ 432 (444)
. +.. ++..+++++.+.
T Consensus 188 ~~~~~~~~~~~~~~l~~~ 205 (268)
T cd06242 188 TLSESLFVPNAGKALEAK 205 (268)
T ss_pred HHHHHHhHHHHHHHHHHc
Confidence 4 443 577888888766
No 33
>PRK10602 murein peptide amidase A; Provisional
Probab=99.98 E-value=2e-32 Score=264.15 Aligned_cols=157 Identities=29% Similarity=0.377 Sum_probs=131.8
Q ss_pred EEEEeeeeecCCceEEEEEeecCCCCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeecCCCC
Q psy15737 218 VTLTDIGRSLEGRPLRLVKISSGVPNAKAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDG 297 (444)
Q Consensus 218 v~~~~iG~S~eGR~I~~l~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~NPDG 297 (444)
++.++||+|+|||||++++++.+ .|+.|||+|||||+||+|++++++++++|..+ ...++|||++||||
T Consensus 15 ~~~~~iG~S~egrpi~~l~~~~~--~~~~vli~agiHG~E~~g~~~~~~l~~~l~~~---------~~~~~iipvvNPDG 83 (237)
T PRK10602 15 PGTEHYGRSLLGAPLLWFPAPAA--SRESGLILAGTHGDETASVVTLSCALRTLTPS---------LRRHHVVLAVNPDG 83 (237)
T ss_pred ccccccccccCCCceEEEEcCCC--CCceEEEEecCCCCcHHHHHHHHHHHHhhhhh---------ccceEEEEEECccc
Confidence 67899999999999999999753 47899999999999999999999999998753 34578999999999
Q ss_pred ccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCC-CCCCCC-----CCCCcccc--ccCCCCCC
Q psy15737 298 YEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGF-HWGGVG-----SSKEQCQQ--IYAGTGPF 369 (444)
Q Consensus 298 y~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~-~W~~~g-----~s~~pc~~--~y~G~~p~ 369 (444)
|+++. +.+|.|+| ||||||. +|...+ ++..||.. +|+|+.|+
T Consensus 84 ~~~~~---------------R~n~~GvD---------------LNRnFp~~~w~~~~~~~~w~~~~~~~~~~~y~G~~p~ 133 (237)
T PRK10602 84 CQLGL---------------RANANGVD---------------LNRNFPAANWKEGETVYRWNSAAEERDVVLLTGDKPG 133 (237)
T ss_pred ccccc---------------ccCCCCCc---------------hhhcCCCcccccccccccccCCCCccchhhccCCCCC
Confidence 98753 34689999 9999997 887654 45678876 79999999
Q ss_pred CHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHHH
Q psy15737 370 SEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEAM 429 (444)
Q Consensus 370 SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~~~~~~d~~~l~~la~~~a~ai 429 (444)
|||||+|+++|+.++ ++.+++++|+ ||++... ++...++..+|+++
T Consensus 134 SepEt~al~~~i~~~--~~~~~~s~Hs-------P~~~~~~-----~~~~~~~~~la~af 179 (237)
T PRK10602 134 SEPETQALCQLIHRL--QPAWVVSFHD-------PLACIED-----PRHSELGEWLAQAF 179 (237)
T ss_pred CCHHHHHHHHHHHHc--CCCEEEEeec-------cccccCC-----ccchHHHHHHHHHh
Confidence 999999999999998 5689999999 6666332 34566777777775
No 34
>cd06241 Peptidase_M14-like_1_4 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.97 E-value=4e-31 Score=260.02 Aligned_cols=164 Identities=24% Similarity=0.411 Sum_probs=136.4
Q ss_pred HHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCC---------CCCceEEEeccccCCCCccHHHHHHHHHHHHHhc
Q psy15737 205 GYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV---------PNAKAFWIDGGIHAREWITPATVSFILSELVENR 275 (444)
Q Consensus 205 ~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~---------~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~ 275 (444)
+|+++|++.|| .+++++||+|.|||||++++|+.+. .+||+|||.|||||+||.|++++++++++|+.+.
T Consensus 1 a~~~~La~~~~-~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~~~~~kp~v~i~agiH~~E~~G~~a~~~ll~~L~~~~ 79 (266)
T cd06241 1 AFLERLAAASP-LIRLESFGKTPEGRPLHLLVLSKDGAFTPEEAKRSGKPVVLVQAGIHAGEIDGKDAGLMLLRDLADGK 79 (266)
T ss_pred CHHHHHHHhCC-ceEEEEeEeCCCCCeeEEEEEecCCccchhhhcccCCCEEEEeCCcCCCCchHHHHHHHHHHHHHhcc
Confidence 48999999996 6999999999999999999998754 4789999999999999999999999999999865
Q ss_pred hhcHHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCCCC
Q psy15737 276 EAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSS 355 (444)
Q Consensus 276 ~~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s 355 (444)
. ..+|++++|+|||++||||+++.... +|.|.. |-+ ..+.|.|+.|+||||||+
T Consensus 80 ~--~~ll~~~~i~ivP~~NpDG~~~~~~~---~r~~q~---------gp~---~~~~R~na~g~DLNRdf~--------- 133 (266)
T cd06241 80 K--DALLDKVVLVFIPVFNVDGHERRSPY---NRTNQN---------GPE---EYGWRGNARNLNLNRDFI--------- 133 (266)
T ss_pred h--HHHHhCCEEEEEeCCCccHHHhcccc---cccccC---------CCC---ccCceecccceecCCCCc---------
Confidence 3 37999999999999999999986543 233322 111 135678888888999996
Q ss_pred CCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCCCC
Q psy15737 356 KEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKK 410 (444)
Q Consensus 356 ~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~~~ 410 (444)
..++||+||+++++..+ ++.++||+|++++. .|+|+.+..
T Consensus 134 ------------~~~~pEtra~~~~~~~~--~p~~~iD~H~~~g~-~~~yd~t~~ 173 (266)
T cd06241 134 ------------KLDAPEMRAFAKLFNKW--NPDLFIDNHVTDGA-DYQYDLTYD 173 (266)
T ss_pred ------------ccCCHHHHHHHHHHHHh--CCCEEEEeccCCCc-Cceeeeccc
Confidence 24689999999999998 78999999999775 677766544
No 35
>cd06235 M14_Nna1_like_2 Subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human Nna1/AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induc
Probab=99.97 E-value=1.3e-30 Score=255.50 Aligned_cols=153 Identities=24% Similarity=0.327 Sum_probs=130.0
Q ss_pred CCceEEEEeeeeecCCceEEEEEeecCC------CCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceE
Q psy15737 214 YPQLVTLTDIGRSLEGRPLRLVKISSGV------PNAKAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDF 287 (444)
Q Consensus 214 ~p~~v~~~~iG~S~eGR~I~~l~Is~~~------~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~ 287 (444)
.++.+++.+||+|.+||+|++++|++.. ..||.|||.|++||+||+|+.+++++++.|+........++++++|
T Consensus 9 ~~~~~~~~~iG~S~eGr~i~~l~i~~~~~~~~~~~~k~~V~i~a~iH~~E~~~s~~~~~ll~~Ll~~~~~~~~Ll~~~~~ 88 (258)
T cd06235 9 NNQYLKRKILCTTLGGLPVPLLTITSPSSKSIPIKKKKVIVITARQHPGETNSSFVMQGFIDFLLSDSPEAQYLRENFIF 88 (258)
T ss_pred CCCceEEEEeEEcCCCCeeeEEEEeCCcccccccCCCcEEEEECCcCCCChHHHHHHHHHHHHHhcCCHHHHHHHhccEE
Confidence 5678999999999999999999999742 4789999999999999999999999999999875545679999999
Q ss_pred EEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q psy15737 288 YVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTG 367 (444)
Q Consensus 288 ~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~~ 367 (444)
+||||+||||+++.+. |.+|.|+| |||||. +| .
T Consensus 89 ~iiPm~NPDG~~~g~~--------------R~n~~GvD---------------LNR~w~----------~p--------~ 121 (258)
T cd06235 89 KIIPMLNPDGVIHGNY--------------RCSLSGID---------------LNRQWK----------NP--------D 121 (258)
T ss_pred EEEccccccceeecCC--------------cCCCCCCC---------------cCCCCC----------CC--------C
Confidence 9999999999987431 56789999 999996 23 3
Q ss_pred CCCHHHHHHHHHHHHHhC--CCeeEEEEeCCCCCc-ccccCCCCCCCCC
Q psy15737 368 PFSEPETQAVSRFILANN--ANMKAFVTFHSYGQY-ILYPWGYNKKVPP 413 (444)
Q Consensus 368 p~SepEtral~~~i~~~~--~~~~~~idlHs~g~~-ilyP~g~~~~~~~ 413 (444)
|+++||++++++++.++. .++.+|||+|+++.. -.|+||......+
T Consensus 122 ~~~~PE~~~~~~~i~~~~~~~~~~~~iDlH~~s~~~~~F~yg~~~~~~~ 170 (258)
T cd06235 122 KKLHPEIYHVKQLIKKLSQERNIALFIDLHGHSRKKNSFMYGCSNSDDP 170 (258)
T ss_pred cccCcHHHHHHHHHHHHhccCCceEEEecccccccCCeeeecCCCCCcH
Confidence 789999999999999872 489999999999974 3467877655433
No 36
>cd06239 Peptidase_M14-like_1_2 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.97 E-value=4.6e-30 Score=247.19 Aligned_cols=141 Identities=26% Similarity=0.400 Sum_probs=123.0
Q ss_pred HHHhCCceEEEEeeeeecCCceEEEEEeecCCCCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhc-HHhhccceEE
Q psy15737 210 LAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAKAFWIDGGIHAREWITPATVSFILSELVENREAQ-EDYIKKIDFY 288 (444)
Q Consensus 210 la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~-~~lL~~~~~~ 288 (444)
+.+++|+.++++.||+|++||||++++|+++ +|+|+|.|++||+||+|+.++++|++.|+.+.... ..+|++++|+
T Consensus 2 ~~~~~p~~v~~~~iG~S~eGrpI~~l~ig~g---~~~vli~agiHG~E~~g~~all~ll~~L~~~~~~~~~~ll~~~~v~ 78 (231)
T cd06239 2 LLEKLPAKFKVEVIGKSVEGRPIYSVKFGSG---KIKILLWSQMHGNESTTTKALLDLLNFLGTSKDQEAKKILDEVTLV 78 (231)
T ss_pred hHHHCCCeeEEEEeeECCCCCeEEEEEEcCC---CcEEEEEeccCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHhCCEEE
Confidence 4578999999999999999999999999874 69999999999999999999999999999875433 5699999999
Q ss_pred EEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCccccccCCCCC
Q psy15737 289 VLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGP 368 (444)
Q Consensus 289 IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~~p 368 (444)
|||++||||++. +||.| ..|+| |||||+ +
T Consensus 79 iiP~lNPDG~~~------~~R~N---------~~GvD---------------LNRdf~---------------------~ 107 (231)
T cd06239 79 IIPMLNPDGAEA------YTRVN---------ANGVD---------------LNRDAQ---------------------D 107 (231)
T ss_pred EEeccCccHHHH------cccCC---------CcCCc---------------CCCCCC---------------------C
Confidence 999999999986 34433 34888 999996 3
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCC
Q psy15737 369 FSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYN 408 (444)
Q Consensus 369 ~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~ 408 (444)
.++||++++++++.++ ++.++||||+++.+ |.++-+
T Consensus 108 ~s~PEtr~l~~~~~~~--~pd~~iDlH~~~~~--y~~~~~ 143 (231)
T cd06239 108 LSQPESRLLRDVYDGF--QPDFCFNLHDQRTI--YGVENT 143 (231)
T ss_pred CChHHHHHHHHHHHhc--CCEEEEEECCCCCc--cCCCCC
Confidence 5799999999999988 69999999999996 666544
No 37
>cd06236 M14_AGBL5_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-5, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL5 and the mouse cytosolic carboxypeptidase (CCP)-5. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal
Probab=99.97 E-value=2.5e-30 Score=256.89 Aligned_cols=147 Identities=21% Similarity=0.318 Sum_probs=127.1
Q ss_pred eEEEEeeeeecCCceEEEEEeecCC-------------------------CCCceEEEeccccCCCCccHHHHHHHHHHH
Q psy15737 217 LVTLTDIGRSLEGRPLRLVKISSGV-------------------------PNAKAFWIDGGIHAREWITPATVSFILSEL 271 (444)
Q Consensus 217 ~v~~~~iG~S~eGR~I~~l~Is~~~-------------------------~~kp~v~i~~giHgrE~i~~~~~l~~i~~L 271 (444)
.++.+.+|+|.|||+|++|+|++.. .+||+|||+|+|||+||+|+.+++++|++|
T Consensus 15 y~~~~~Lg~S~eGR~i~lLtITs~~~~~~~~~~~~~~l~~~~~~~~~~~~~~K~~V~I~ariHp~E~~~s~~~~~ll~~L 94 (304)
T cd06236 15 YYHREVLCYSLEGRRIDLLTITSCHGKLEQREPRLEGLFPDRKTPRPHFFFGKPVVFISSRVHPGETPSSFVFNGFLKFL 94 (304)
T ss_pred EEEEEEeEECCCCCceEEEEEecCcccccccccccccccccccccccccccCCcEEEEECCcCCCCchHHHHHHHHHHHH
Confidence 4788999999999999999998642 369999999999999999999999999999
Q ss_pred HHhchhc-HHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCC
Q psy15737 272 VENREAQ-EDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWG 350 (444)
Q Consensus 272 ~~~~~~~-~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~ 350 (444)
+.++... ..++++++|+||||+||||+++++. |.+|.|+| |||+|.
T Consensus 95 l~~~d~~a~~L~~~~~~~IvPmlNPDGv~~g~~--------------R~~~~G~D---------------LNR~y~---- 141 (304)
T cd06236 95 LNKDDPRAALLRRRFVFKLIPMLNPDGVYRGHY--------------RTDTRGVN---------------LNRVYL---- 141 (304)
T ss_pred HhCCCHHHHHHHhCCeEEEEEeEcccccccCcc--------------ccCCcCCC---------------cCcCCC----
Confidence 9864333 3477899999999999999998652 45699999 999863
Q ss_pred CCCCCCCccccccCCCCCCCHHHHHHHHHHHHHh--CCCeeEEEEeCCCCCccc-ccCCCCCC
Q psy15737 351 GVGSSKEQCQQIYAGTGPFSEPETQAVSRFILAN--NANMKAFVTFHSYGQYIL-YPWGYNKK 410 (444)
Q Consensus 351 ~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~--~~~~~~~idlHs~g~~il-yP~g~~~~ 410 (444)
|+.|+++||++|+++++..+ ..++.+|||||++++... |+||....
T Consensus 142 --------------~p~~~~~Pei~aik~~i~~~~~~~~i~~yiDlH~hs~~~~~F~Yg~~~~ 190 (304)
T cd06236 142 --------------NPDPELHPSIYAIKKLILYLHEESRLAFYIDLHAHASKRGCFIYGNALE 190 (304)
T ss_pred --------------CCCcccCHHHHHHHHHHHHhhccCCceEEEEecccccccceEeeecCCC
Confidence 77899999999999999876 367999999999999766 88887653
No 38
>cd06907 M14_AGBL2-3_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-2, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subgroup includes the human AGBL-2, and -3, and the mouse cytosolic carboxypeptidase (CCPs)-2, and -3. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N
Probab=99.96 E-value=1e-29 Score=247.62 Aligned_cols=152 Identities=22% Similarity=0.268 Sum_probs=126.3
Q ss_pred CceEEEEeeeeecCCceEEEEEeecCC------CCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEE
Q psy15737 215 PQLVTLTDIGRSLEGRPLRLVKISSGV------PNAKAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFY 288 (444)
Q Consensus 215 p~~v~~~~iG~S~eGR~I~~l~Is~~~------~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~ 288 (444)
++++++++||+|+|||+|++|+|++.. ..||+|||+|++|+|||.+..++..+++.|+.+......++++++|+
T Consensus 11 ~~~~~~~~lg~S~eGR~i~~LtIt~~~~~~~~~~~K~~I~I~ariHp~E~~~s~~~~gll~~L~~~~~~a~~Lr~~~~f~ 90 (261)
T cd06907 11 SKFCKLRVLCRTLAGNTVYLLTITSPSSNPSLAAAKKAVVLTARVHPGETNASWMMKGFLDFLTSNSPDAQLLRDTFIFK 90 (261)
T ss_pred CCceEEEEEEECCCCCeeeEEEEcCCCccccccCCCCEEEEECCcCCChHHHHHHHHHHHHHHhcCCHHHHHHHhcCCEE
Confidence 457999999999999999999998743 36999999999999999999999999999987644455688999999
Q ss_pred EEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCccccccCCCCC
Q psy15737 289 VLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGP 368 (444)
Q Consensus 289 IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~~p 368 (444)
||||+||||+.+.+. +.+|.|+| |||||...| +
T Consensus 91 IvPmlNPDGv~~G~~--------------R~~~~G~D---------------LNR~w~~p~------------------~ 123 (261)
T cd06907 91 IVPMLNPDGVIVGNY--------------RCSLAGRD---------------LNRNYKTPL------------------K 123 (261)
T ss_pred EEEeecCccccccCC--------------cCCCcCCC---------------CCcCCCCCC------------------c
Confidence 999999999997652 56799999 999997433 4
Q ss_pred CCHHHHHHHHHHHHHh--CCCeeEEEEeCCCCCccc-ccCCCCCCCCC
Q psy15737 369 FSEPETQAVSRFILAN--NANMKAFVTFHSYGQYIL-YPWGYNKKVPP 413 (444)
Q Consensus 369 ~SepEtral~~~i~~~--~~~~~~~idlHs~g~~il-yP~g~~~~~~~ 413 (444)
.+.||+.++++++... ..++.+|||||++++... ||||+....++
T Consensus 124 ~~~P~i~~~k~li~~l~~~~~i~~ylDlHghs~~~~~F~yG~~~~~~~ 171 (261)
T cd06907 124 DSFPTIWYTKNMVKRLLEEREVILYCDLHGHSRKNNVFMYGCENKLNP 171 (261)
T ss_pred ccCchHHHHHHHHHHHHhcCCeEEEEEeccchhccceEeecCCCCCCH
Confidence 5668877777766543 358999999999999855 99998865443
No 39
>cd06243 Peptidase_M14-like_1_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.96 E-value=1.1e-28 Score=238.43 Aligned_cols=122 Identities=26% Similarity=0.415 Sum_probs=107.4
Q ss_pred eeeecCCceEEEEEeecCC-------CCCceEEEeccccCCCCccHHHHHHHHHHHHHhchh-cHHhhccceEEEEeecC
Q psy15737 223 IGRSLEGRPLRLVKISSGV-------PNAKAFWIDGGIHAREWITPATVSFILSELVENREA-QEDYIKKIDFYVLPITN 294 (444)
Q Consensus 223 iG~S~eGR~I~~l~Is~~~-------~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~-~~~lL~~~~~~IvP~~N 294 (444)
||+|+|||||++++|+++. ..+|+||+.||+||+||+|+++++.++++|+..... ...+|++++|+|+|++|
T Consensus 1 iG~S~eGRpi~~l~i~~~~~~~~~~~~~~p~v~i~~giHG~E~~G~~a~l~ll~~L~~~~~~~~~~lL~~~~i~ivP~~N 80 (236)
T cd06243 1 IGTSQRGRPIHLVRVGFAEGPSALDIANRPTVLLVGTQHGDEPAGREALLIIARDLAFGEDEELVPLLHQTTVLFVPTAN 80 (236)
T ss_pred CccCCCCCeeEEEEEecCCCccccccCCCCEEEEECCcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHhcceEEEEeCcC
Confidence 6999999999999999764 367999999999999999999999999999875332 24699999999999999
Q ss_pred CCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCHHHH
Q psy15737 295 PDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPFSEPET 374 (444)
Q Consensus 295 PDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~~p~SepEt 374 (444)
|||+++.. +.+|.|+| |||||+ ++++|||
T Consensus 81 PDG~~~~~---------------R~n~~g~D---------------lNRd~~---------------------~~~~pEt 109 (236)
T cd06243 81 PDGREADT---------------RSNADGID---------------INRDHL---------------------LLNTPEA 109 (236)
T ss_pred ccHhhcCC---------------cCCCCCcc---------------cCCCCC---------------------CCCCHHH
Confidence 99998631 45678888 999996 4679999
Q ss_pred HHHHHHHHHhCCCeeEEEEeCCC
Q psy15737 375 QAVSRFILANNANMKAFVTFHSY 397 (444)
Q Consensus 375 ral~~~i~~~~~~~~~~idlHs~ 397 (444)
+++++++.++ ++.++||||++
T Consensus 110 ~al~~~~~~~--~p~~~iDlHe~ 130 (236)
T cd06243 110 QALASVLRDY--RPDVVVDAHEY 130 (236)
T ss_pred HHHHHHHHhc--CCEEEEEeCCC
Confidence 9999999998 78999999999
No 40
>KOG2649|consensus
Probab=99.96 E-value=5e-28 Score=247.56 Aligned_cols=212 Identities=25% Similarity=0.397 Sum_probs=179.7
Q ss_pred cCCCHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCC----CCCceEEEeccccCCCCccHHHHHHHHHHH
Q psy15737 196 KYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV----PNAKAFWIDGGIHAREWITPATVSFILSEL 271 (444)
Q Consensus 196 ~Y~t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~----~~kp~v~i~~giHgrE~i~~~~~l~~i~~L 271 (444)
.||+|++|.++|+.+..+||++.++.+||+|++||+||++.|++.+ ..+|.+=+.|++||+|.+|-+.++++++.|
T Consensus 68 ~hh~y~~m~~~l~~~~~~~p~itrlYSiGkSv~Gr~L~Vle~sd~PgeH~~gePEfKyv~nmHGnE~vGRElll~L~e~L 147 (500)
T KOG2649|consen 68 GHHNYDDLEKALKDFTKRCPNITRLYSIGKSVEGRELWVIEISDRPGEHEPGEPEFKYIGNMHGNEVVGRELLLRLAEYL 147 (500)
T ss_pred CCCCHHHHHHHHHHHHhhCCcceeeeeccccccCceEEEEEcCCCCCcccCCCCcceeeeeccccccccHHHHHHHHHHH
Confidence 7999999999999999999999999999999999999999999865 468999999999999999999999999999
Q ss_pred HHhchhcHH---hhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCC
Q psy15737 272 VENREAQED---YIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFH 348 (444)
Q Consensus 272 ~~~~~~~~~---lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~ 348 (444)
|.+|..++. ++++..|+|+|.+||||||.....+|.|--.|+ +..|+| ||||||..
T Consensus 148 c~~y~~n~~i~~Lv~~trIHlmPSmNPDGyE~a~~~~~~~~~GR~------Nang~D---------------LNrnFPd~ 206 (500)
T KOG2649|consen 148 CDNYGKDPRITQLVNNTRIHIMPSMNPDGYEIAKRGDRGWATGRN------NANGVD---------------LNRNFPDQ 206 (500)
T ss_pred HHhcCCChHHHHHHhhceEEEecccCcchhhhhhcccccceeccc------Cccccc---------------hhccCccc
Confidence 999977754 899999999999999999988777777664433 234555 99999975
Q ss_pred CCCCC--------CCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCCCCC------CCCCC
Q psy15737 349 WGGVG--------SSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNK------KVPPD 414 (444)
Q Consensus 349 W~~~g--------~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g~~~------~~~~d 414 (444)
+...- .+..|- |.-+...-+|||+|+++|+.++ .|.+--+||++.-+..|||+.+. ++.||
T Consensus 207 ~~~~~~~~~~~~~n~~l~~---~~~~~~~~~pEt~Avm~W~~~~--pFvLSAnLHGG~lvanYPfD~~~~~~~~~s~tpD 281 (500)
T KOG2649|consen 207 FRLVYFIVTFDLLNSHLIM---FNDDLNLRQPETIAVMKWLRDI--PFVLSANLHGGALVANYPFDDTEDKRKYYSASPD 281 (500)
T ss_pred ccceeeeeeeccccccccc---ccccccccCccHHHHHHHHhhc--ceeeeccccCCceEEEccccCCcccccccCCCCC
Confidence 44210 112222 4444556789999999999998 89999999999999999998764 46789
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q psy15737 415 YADLDRVGRAAAEAMRVAG 433 (444)
Q Consensus 415 ~~~l~~la~~~a~ai~~~~ 433 (444)
...+..||+..|.+-..++
T Consensus 282 d~~F~~La~~YA~~h~~M~ 300 (500)
T KOG2649|consen 282 DATFRFLARIYAKSHRNMS 300 (500)
T ss_pred cHHHHHHHHHHHhhChhhh
Confidence 9999999999999887765
No 41
>cd06244 Peptidase_M14-like_1_7 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.95 E-value=2.9e-27 Score=230.81 Aligned_cols=158 Identities=29% Similarity=0.408 Sum_probs=126.9
Q ss_pred eeeecCCceEEEEEeecCC------------------------------CCCceEEEeccccCCCCccHHHHHHHHHHHH
Q psy15737 223 IGRSLEGRPLRLVKISSGV------------------------------PNAKAFWIDGGIHAREWITPATVSFILSELV 272 (444)
Q Consensus 223 iG~S~eGR~I~~l~Is~~~------------------------------~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~ 272 (444)
||+|.|||+|+++.|++.. ..++.|++.++|||+||+|+++++.++++|+
T Consensus 1 iGkS~eGR~l~~~~Is~~~a~ld~~~~~~~~l~l~dp~~~~~~~~~~~~~~~k~v~~~~~iHg~E~~g~~a~l~ll~~L~ 80 (268)
T cd06244 1 AGKSAEGRDIPVVVVAKPEAAVDKYENETLPLMLENPPELADKIEDGTIEDYKPPIINNNIHPDETPGIDAQTELIEELA 80 (268)
T ss_pred CCcCCCCCeeEEEEEeCcHHHHHHHHHHhhhhhhcCcccchhhhccccccccCeEEEEeCcCCCCHHHHHHHHHHHHHHH
Confidence 7999999999999999763 1467788889999999999999999999999
Q ss_pred Hhch----------------h-cHHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccc
Q psy15737 273 ENRE----------------A-QEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEED 335 (444)
Q Consensus 273 ~~~~----------------~-~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~ 335 (444)
..+. . -.++|+++.|+|+|++||||+++.. |.+|.|+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~i~~lL~~~~i~i~P~~NPDG~~~~~---------------R~Na~G~D---------- 135 (268)
T cd06244 81 QEDEIEFNTTDADGNEVTETLDVDDLLEKVIFLFNVTENPDGRVAGT---------------RENANGFD---------- 135 (268)
T ss_pred hcccccccccccccccccCCHHHHHHHhcCEEEEEecccCCcceeee---------------ecCCCccc----------
Confidence 8762 1 2459999999999999999998632 45678888
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCC-cccccCCCCCCCCCC
Q psy15737 336 EKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQ-YILYPWGYNKKVPPD 414 (444)
Q Consensus 336 ~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~-~ilyP~g~~~~~~~d 414 (444)
|||||.+ .++||||++++++.++ ++.+++|+|++.. .++.|..-...+.-+
T Consensus 136 -----LNRD~~~---------------------~sqpEt~av~~~~~~w--~P~~~~dlHg~~~~~~~~P~~~p~np~~~ 187 (268)
T cd06244 136 -----LNRDNSF---------------------QTQPETQAIVALIAEW--NPASFLDLHGYVEGFLIEPCTPPHEPNFE 187 (268)
T ss_pred -----cCCCCCc---------------------ccCHHHHHHHHHHHHh--CCeEEEEeCCCCCceEEcCCCCCCCCCcC
Confidence 9999962 3789999999999998 7899999999985 444584333344445
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q psy15737 415 YADLDRVGRAAAEAMRVAG 433 (444)
Q Consensus 415 ~~~l~~la~~~a~ai~~~~ 433 (444)
++.+.+.+...|.+|.+..
T Consensus 188 ~~l~~~~~~~~~~~~~~~~ 206 (268)
T cd06244 188 YDLLADHALAQAHAMGRAG 206 (268)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 5666777777777776543
No 42
>cd00596 Peptidase_M14_like The M14 family of metallocarboxypeptidases (MCPs) are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring
Probab=99.95 E-value=3e-27 Score=221.63 Aligned_cols=138 Identities=36% Similarity=0.614 Sum_probs=123.5
Q ss_pred EEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccC
Q psy15737 247 FWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDL 326 (444)
Q Consensus 247 v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~ 326 (444)
|||.||+||+||+|+.++++++++|+..+.....++++.+|+|+|++||||+++. .||+|+ .|+|
T Consensus 1 v~i~ag~Hg~E~~g~~~~~~~~~~l~~~~~~~~~l~~~~~i~iiP~~NPdG~~~~-----~~R~n~---------~g~D- 65 (196)
T cd00596 1 VLIIAGIHGNETIGVEAALALLRRLLSNYGRDTKLLENGRLLVVPVLNPDGYEAV-----NWRKNA---------NGVD- 65 (196)
T ss_pred CEEECCcCCCcHHHHHHHHHHHHHHHHcCcchHHHHhCCeEEEEeCcccccceee-----eEEeCC---------CCcC-
Confidence 6899999999999999999999999998766677999999999999999999874 467664 2788
Q ss_pred CCCCCCccccCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCC
Q psy15737 327 VTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWG 406 (444)
Q Consensus 327 ~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g 406 (444)
|||||+..|.. .++++||++++.+++.++ ++.++||||++++.++|||+
T Consensus 66 --------------lNR~f~~~~~~---------------~~~~~~e~~~~~~~~~~~--~~~~~idlH~~~~~~~~p~~ 114 (196)
T cd00596 66 --------------LNRNFPGLWGK---------------GPLSEPETRALAELIQQR--KVDLYIDLHSGSLGVLYPYS 114 (196)
T ss_pred --------------ccCCCCCcccC---------------CCCCcHHHHHHHHHHHhC--CceEEEEEecCCceEEecCC
Confidence 99999988853 478999999999999998 89999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHH
Q psy15737 407 YNKKVPPDYADLDRVGRAAAEAMR 430 (444)
Q Consensus 407 ~~~~~~~d~~~l~~la~~~a~ai~ 430 (444)
+....+++......+|..++.++.
T Consensus 115 ~~~~~~~~~~~~~~~a~~~~~~~~ 138 (196)
T cd00596 115 HSDTPPPDAEIPKALAQLLADAAR 138 (196)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcc
Confidence 998888999999999998887764
No 43
>cd03857 Peptidase_M14-like_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=99.95 E-value=7.9e-27 Score=224.69 Aligned_cols=129 Identities=30% Similarity=0.578 Sum_probs=109.8
Q ss_pred eeeecCCceEEEEEeecCCC---------CCceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeec
Q psy15737 223 IGRSLEGRPLRLVKISSGVP---------NAKAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPIT 293 (444)
Q Consensus 223 iG~S~eGR~I~~l~Is~~~~---------~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~ 293 (444)
||+|+|||||++++|+++.. .||+|||.||+||+|+.|+++++.++++|+.+......+|++.+|+|||++
T Consensus 1 iG~S~eGRpi~~~~i~~~~~~~~~~~~~~~k~~v~i~~giHg~E~~g~~a~~~l~~~l~~~~~~~~~ll~~~~i~ivP~~ 80 (226)
T cd03857 1 IGKSVEGRPLWMVTLTTAEGMKKRALAKEGKPRVWIDAQIHGNESAGSDALLELLRQLASASDEEAKMLENIVIVLIPRA 80 (226)
T ss_pred CccCCCCCeEEEEEEeCCccccccccccCCCcEEEEECCcCCCCchHHHHHHHHHHHHHhCCHHHHHHHhCCEEEEEecc
Confidence 69999999999999997432 689999999999999999999999999999865444679999999999999
Q ss_pred CCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCHHH
Q psy15737 294 NPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPFSEPE 373 (444)
Q Consensus 294 NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~~p~SepE 373 (444)
||||+++. || .++.|+| |||||+. .++||
T Consensus 81 NPDG~~~~------~R---------~n~~g~D---------------LNRd~~~---------------------~~~pE 109 (226)
T cd03857 81 NPDGAALF------TR---------ENANGLD---------------LNRDFLK---------------------LTQPE 109 (226)
T ss_pred CCChHHhc------cc---------cCCCccc---------------CCCCCCC---------------------cCCHH
Confidence 99999863 34 3356888 9999972 37899
Q ss_pred HHHHHHHHHHhCCCeeEEEEeCCC--CCccccc
Q psy15737 374 TQAVSRFILANNANMKAFVTFHSY--GQYILYP 404 (444)
Q Consensus 374 tral~~~i~~~~~~~~~~idlHs~--g~~ilyP 404 (444)
++++.+++.++ ++.++||+|++ |..+.|+
T Consensus 110 t~~~~~~~~~~--~p~~~iDlH~~~~g~~~~~~ 140 (226)
T cd03857 110 TRAVREVFIEW--KPQFFIDLHEYGFGAVSFYD 140 (226)
T ss_pred HHHHHHHHHHc--CCeEEEEcCCCCCcceecCC
Confidence 99999999998 67899999999 5544443
No 44
>cd06240 Peptidase_M14-like_1_3 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T
Probab=99.93 E-value=2.7e-25 Score=218.61 Aligned_cols=180 Identities=22% Similarity=0.307 Sum_probs=129.5
Q ss_pred EEEeeeeecCCceEEEEEeecCC-------------------------------CCCceEEEeccccCCCCccHHHHHHH
Q psy15737 219 TLTDIGRSLEGRPLRLVKISSGV-------------------------------PNAKAFWIDGGIHAREWITPATVSFI 267 (444)
Q Consensus 219 ~~~~iG~S~eGR~I~~l~Is~~~-------------------------------~~kp~v~i~~giHgrE~i~~~~~l~~ 267 (444)
++++||+|+|||||++++|++.. ..||+|||.|+|||+||+|+++++++
T Consensus 1 ~l~~iGkS~EGR~l~~~~Iss~~n~~~ld~~~~~~~~la~~~~~~~~~a~~~~~~~kp~v~i~~~iHg~E~~g~ea~l~l 80 (273)
T cd06240 1 KLVEIGKTEEGRPQIMAAISSPENLAKLDHYKAILRKLADPRGLTEEQARALIAEGKPIVWIDGGLHSTETGGPQMLMEL 80 (273)
T ss_pred CeeEeecCCCCCeEEEEEeeChhHhhhHHHHHHHHhhhhccccccchhhhhhhccCCCEEEEECCcCCCchHHHHHHHHH
Confidence 47899999999999999998532 24899999999999999999999999
Q ss_pred HHHHHHhchh-cHHhhccceEEEEeecCCCCcccccccccccc-ccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCC
Q psy15737 268 LSELVENREA-QEDYIKKIDFYVLPITNPDGYEYTHTTERLWR-KNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNW 345 (444)
Q Consensus 268 i~~L~~~~~~-~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WR-Knr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf 345 (444)
+++|+.+.+. ..++|++++|+|+|++||||++.... |. .+..... ... .-+ ...+.+..|+||||+|
T Consensus 81 ~~~L~~~~d~~~~~lLd~~~i~i~P~~NPDG~er~~~----w~~~~~~~~~-~~~--~~~----~~~~~~y~g~DlNRD~ 149 (273)
T cd06240 81 AYRLATEEDPEIKRILDNVIVLIVPVANPDGRDRVVD----WYMRTLGPPK-RDR--SPL----PPLYGKYVGHDNNRDG 149 (273)
T ss_pred HHHHHhcCCHHHHHHHhcCEEEEEeCcCCCHHHHhhh----hhhhccCCcc-cCC--CCc----ccccCccCCcCCCccc
Confidence 9999986332 24699999999999999999996321 11 1211110 000 000 0012334456699999
Q ss_pred CCCCCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCC---ccccc-CCCCCC---CCCCHHHH
Q psy15737 346 GFHWGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQ---YILYP-WGYNKK---VPPDYADL 418 (444)
Q Consensus 346 ~~~W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~---~ilyP-~g~~~~---~~~d~~~l 418 (444)
- ..+.||++++.+++.++ ++.+++|+|.+|. .++-| +..... +|...+++
T Consensus 150 ~---------------------~~~~~et~~~~~~~~~w--~P~v~~D~He~g~~~~~~f~p~~~~p~np~~~~~~~~~~ 206 (273)
T cd06240 150 Y---------------------MNQQETTNNSRKLFLEW--HPQIMYDLHQSGPAGPRLFVPPGTDPFNPNIDPILITEL 206 (273)
T ss_pred c---------------------hhcCHHHHHHHHHHHhc--CCcEEEEcccCCCCCCeEeCCCCCCCCCCCCCHHHHHHH
Confidence 5 24679999999999998 7888999999964 33324 222221 23345588
Q ss_pred HHHHHHHHHHHHHh
Q psy15737 419 DRVGRAAAEAMRVA 432 (444)
Q Consensus 419 ~~la~~~a~ai~~~ 432 (444)
..+|..+|+++.+.
T Consensus 207 ~~~g~~~~~~~~~~ 220 (273)
T cd06240 207 QMVGAAMAARLTAE 220 (273)
T ss_pred HHHHHHHHHHHHhc
Confidence 88899999999764
No 45
>cd06904 M14_MpaA_like Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A (MpaA) and related proteins. MpaA is a member of the M14 family of metallocarboxypeptidases (MCPs), however it has an exceptional type of activity, it hydrolyzes the gamma-D-glutamyl-meso-diaminopimelic acid (gamma-D-Glu-Dap) bond in murein peptides. MpaA is specific for cleavage of the gamma-D-Glu-Dap bond of free murein tripeptide; it may also cleave murein tetrapeptide. MpaA has a different substrate specificity and cellular role than endopeptidase I, ENP1 (ENP1 does not belong to this group). MpaA works on free murein peptide in the recycling pathway.
Probab=99.92 E-value=1.2e-25 Score=208.94 Aligned_cols=117 Identities=31% Similarity=0.409 Sum_probs=99.7
Q ss_pred EEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccC
Q psy15737 247 FWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDL 326 (444)
Q Consensus 247 v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~ 326 (444)
|+|.||+||+||+|+.++++++++|+.. .|++++|+|||++||||+++. || .+..|+|
T Consensus 1 vli~agiHG~E~~g~~~~~~l~~~l~~~------~l~~~~i~ivP~~NPdG~~~~------~R---------~n~~gvD- 58 (178)
T cd06904 1 VLIIGGIHGDEPASVSDLEELLRILPGL------ILRGLSWYVIPVLNPDGLLRA------TR---------CNANGVD- 58 (178)
T ss_pred CEEEeccCCCCHHHHHHHHHHHHHHHHH------hhcCCeEEEEeCcCccHHhhC------cc---------cCCCCcC-
Confidence 6899999999999999999999999875 378899999999999999872 22 2234888
Q ss_pred CCCCCCccccCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCccccc
Q psy15737 327 VTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYP 404 (444)
Q Consensus 327 ~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP 404 (444)
||||||+.|...+.+.. ++|+|+.|+|||||+++++++.+. ++.++||||+++..+.++
T Consensus 59 --------------LNRnFp~~~~~~~~~~~---~~~~G~~~~sepEt~al~~~~~~~--~~~~~idlHs~~~~~~~~ 117 (178)
T cd06904 59 --------------LNRNFPTKDWPPGASRY---RRYPGPKPGSEPESRALMDLIERF--KPDVVVSFHAPLGVLDGD 117 (178)
T ss_pred --------------hhhcCCccccccCCCcc---cccCCCCCCCCHHHHHHHHHHHhc--CCeEEEEeCCCCCeecCC
Confidence 99999999986654332 789999999999999999999986 789999999998766543
No 46
>cd06906 M14_Nna1 Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the mouse Nna1/CCP-1, and -4 proteins, and the human Nna1/AGTPBP-1 protein. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. Mutations in Nna
Probab=99.91 E-value=2.4e-24 Score=210.99 Aligned_cols=147 Identities=21% Similarity=0.301 Sum_probs=116.6
Q ss_pred HHHHHHhCCceEEEEeeeeecCCceEEEEEeecCC-----------CCCceEEEeccccCCCCccHHHHHHHHHHHHHhc
Q psy15737 207 LDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV-----------PNAKAFWIDGGIHAREWITPATVSFILSELVENR 275 (444)
Q Consensus 207 l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~-----------~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~ 275 (444)
|+......+-.++.+.+++|.+||++.+|+|++.+ .+||+|||+|+||++|..|+.++..++..|+...
T Consensus 4 l~~~~~~~~~y~~~~~Lc~Tl~G~~v~lltIt~~~~~~~~~~~~~~~~kp~I~I~ARvHPgEt~~Swi~~g~l~~L~~~d 83 (278)
T cd06906 4 LESLHDPQQIYFRQQVLCETLGGNSCPLLTITAMPESNYYEHICQFRNRPYIFLSARVHPGETNASWVMKGTLEFLMSSS 83 (278)
T ss_pred HhhhcCCcccEEeeecceeccCCCceeEEEEeCCCccccccccccccCCcEEEEEcccCCCcchHHHHHHHHHHHHhCCC
Confidence 34444444567899999999999999999999732 2689999999999999999889999999888764
Q ss_pred hhcHHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCCCC
Q psy15737 276 EAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSS 355 (444)
Q Consensus 276 ~~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s 355 (444)
.....++++++|+||||+||||+.+.+. +.+..|+| |||||. +
T Consensus 84 ~~a~~Lr~~~~f~IvPmlNPDGvv~Gn~--------------Rc~~~G~D---------------LNR~w~--------~ 126 (278)
T cd06906 84 PTAQSLRESYIFKIVPMLNPDGVINGNH--------------RCSLSGED---------------LNRQWQ--------S 126 (278)
T ss_pred HHHHHHHHhCcEEEEeeecCccceeccc--------------ccCCCCCC---------------CCCCCC--------C
Confidence 4456699999999999999999987541 22338888 999986 3
Q ss_pred CCccc--cccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCC
Q psy15737 356 KEQCQ--QIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQ 399 (444)
Q Consensus 356 ~~pc~--~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~ 399 (444)
.+||. +.| .+++|++++.+.+.++.+|||||+++.
T Consensus 127 p~~~~~P~i~---------~~k~l~~~l~~~~~~~~~yiDlHghs~ 163 (278)
T cd06906 127 PNPELHPTIY---------HTKGLLQYLAAIKRSPLVYCDYHGHSR 163 (278)
T ss_pred CCcccChHHH---------HHHHHHHHHHHhCCCceEEEeeccccc
Confidence 45552 222 277777888776668899999999986
No 47
>cd06232 Peptidase_M14-like_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=99.91 E-value=2.8e-24 Score=204.35 Aligned_cols=139 Identities=27% Similarity=0.368 Sum_probs=109.7
Q ss_pred CHHHHHHHHHHHHHhCCceEEEEeeeeecCCceEEEEEeecCCCCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhc
Q psy15737 199 RMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAKAFWIDGGIHAREWITPATVSFILSELVENREAQ 278 (444)
Q Consensus 199 t~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~I~~l~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~ 278 (444)
++.+|...|..| |+ +.+ -.+|+|||+|++++|+ .+||+|||+||+|||||+|+.++++|+++|++
T Consensus 3 ~~~~i~~~l~~~----~g-~~~--~a~S~EGR~I~~l~i~---~~Kp~I~I~gGvHarEwig~~~al~fi~~L~~----- 67 (240)
T cd06232 3 SAGQIAYELAVL----PG-IEF--AARSRQGRPVTGRYVA---GLDHPVVISAGQHANETSGVVGALRAAEALAA----- 67 (240)
T ss_pred CHHHHHHHHhhc----CC-ccc--cccccCCCeeeEEEec---CCCcEEEEeCCcCCCcchhHHHHHHHHHHHhc-----
Confidence 456666666554 33 122 5689999999999993 36899999999999999999999999999997
Q ss_pred HHhhccceEEEEeecCCCCccccccccccccccCCCCC--CCCCCccccCCCCCCCccccCCCCCC-CCCCCCCCCCCCC
Q psy15737 279 EDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSP--KGDSCSGIDLVTYDSDEEDEKTIDLN-RNWGFHWGGVGSS 355 (444)
Q Consensus 279 ~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~--~~~~c~GvD~~~~d~~~~~~~gvDLN-RNf~~~W~~~g~s 355 (444)
+++++|+|+||+|||||+|. +|+||-|..-.. .|.+..|.| +| |.+.
T Consensus 68 ---~~~~n~~I~P~vNPDGYe~~---~~L~r~nP~~~hHaaR~~A~g~D---------------~~fr~~~--------- 117 (240)
T cd06232 68 ---RPGAHFALIPLENPDGYALH---ERLRAEHPRHMHHAARYTALGDD---------------LEYREFP--------- 117 (240)
T ss_pred ---cCCceEEEEEeeCCcHHHhh---chhhccCcccccchhhhcccCCC---------------cccccCC---------
Confidence 67999999999999999984 578888755211 133344555 77 7653
Q ss_pred CCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCC
Q psy15737 356 KEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYG 398 (444)
Q Consensus 356 ~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g 398 (444)
|+ +|++++++++... .+.++||+|.|-
T Consensus 118 ------------~~--~Es~~~~~~~~~~--~~~~hiDlHeyp 144 (240)
T cd06232 118 ------------PF--GEREARHQALAKS--GAQLHVNLHGYP 144 (240)
T ss_pred ------------cc--hHHHHHHHHHHhh--CCcEEEECCCCC
Confidence 33 8999999999998 589999999984
No 48
>cd06231 Peptidase_M14-like_4 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=99.90 E-value=3.6e-23 Score=200.29 Aligned_cols=127 Identities=20% Similarity=0.280 Sum_probs=109.7
Q ss_pred eEEEEeeeeecC-CceEEEEEeecCCCCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeecCC
Q psy15737 217 LVTLTDIGRSLE-GRPLRLVKISSGVPNAKAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNP 295 (444)
Q Consensus 217 ~v~~~~iG~S~e-GR~I~~l~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~NP 295 (444)
.+++..+|+..+ |+||+++++.+.++++|+|+|.||+||+||.|+.++++|+++|... ++++++|+|+||+||
T Consensus 14 ~~~~~~~g~~~~~~~pL~~l~~~~~~~~~p~vlI~gGiHG~E~~G~~a~l~~l~~l~~~------~l~~~~i~ivP~vNP 87 (236)
T cd06231 14 RLDVREYGQLAYQSYPLYALKSRGWDSDLPRVLITAGIHGDEPAGPLGALEFLRAAALE------LAQDVNLSVYPCINP 87 (236)
T ss_pred ceEEEEccccccCCeeEEEEEcCCCCCCCCEEEEECCCCCCcHHHHHHHHHHHHHHHHH------HhcCCeEEEEECcCh
Confidence 478899998876 9999999998766689999999999999999999999999998753 688999999999999
Q ss_pred CCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCHHHHH
Q psy15737 296 DGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPFSEPETQ 375 (444)
Q Consensus 296 DGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~~p~SepEtr 375 (444)
|||++.+ |.+|.|+| |||||+. +.++||++
T Consensus 88 dG~~~~~---------------R~n~~g~D---------------LNR~F~~--------------------~~~~~E~~ 117 (236)
T cd06231 88 SGFEAIT---------------RWNRNGID---------------PNRSFRS--------------------ESPSPEVR 117 (236)
T ss_pred hHHhcCc---------------cCCCCCcc---------------ccCCCCC--------------------CCCCHHHH
Confidence 9998632 23467888 9999973 24679999
Q ss_pred HHHHHHHHhCCCeeEEEEeCCCCC
Q psy15737 376 AVSRFILANNANMKAFVTFHSYGQ 399 (444)
Q Consensus 376 al~~~i~~~~~~~~~~idlHs~g~ 399 (444)
++++++.+...++.++||||+++.
T Consensus 118 al~~~~~~~~~~~~~~IDLH~~~~ 141 (236)
T cd06231 118 LLMEWLRRLGAAFDLHIDLHEDTE 141 (236)
T ss_pred HHHHHHHHhCCCcEEEEEeCCCCC
Confidence 999999887558999999999994
No 49
>KOG3641|consensus
Probab=99.44 E-value=3.4e-13 Score=140.60 Aligned_cols=172 Identities=22% Similarity=0.304 Sum_probs=133.6
Q ss_pred cccccCCCHHHHHHHHHHHHHhCC--ceEEEEeeeeecCCceEEEEEeecC-CCCCceEEEeccccCCCCccHHHHHHHH
Q psy15737 192 MTFHKYHRMEDIHGYLDYLAQTYP--QLVTLTDIGRSLEGRPLRLVKISSG-VPNAKAFWIDGGIHAREWITPATVSFIL 268 (444)
Q Consensus 192 ~~~~~Y~t~~ei~~~l~~la~~~p--~~v~~~~iG~S~eGR~I~~l~Is~~-~~~kp~v~i~~giHgrE~i~~~~~l~~i 268 (444)
|.|..-+||..|.-+|..|++..+ -..+...+++|..||++.+++|... -..+|.|++.|.+|..|..++.++-.++
T Consensus 374 faYhypyTy~~l~~hLn~les~~~~~~yfr~dVl~~tl~g~~~~l~tI~~ae~~~~~~IfLSaRVHpgeTnsSwvmkGil 453 (650)
T KOG3641|consen 374 FAYHYPYTYSQLQCHLNGLESPKNPAFYFRYDVLLFTLVGRAMALATIDMAECAPRPVIFLSARVHPGETNSSWVMKGIL 453 (650)
T ss_pred EeeccCccHHHHHhhhhcccCCCCcCcccchheeeeeecCCccceEEeeHhhcCCcceEEEecccCCCCCcHHHHHHHHH
Confidence 456777899999999999987655 2356678999999999999999832 2468999999999999999999999999
Q ss_pred HHHHHhchhcHHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCC
Q psy15737 269 SELVENREAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFH 348 (444)
Q Consensus 269 ~~L~~~~~~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~ 348 (444)
+.|+.+......+.+.+.|.|+||+||||.-... . +..-.|.| |||-|.-
T Consensus 454 efl~s~~p~aq~LRe~~vFKI~PMLNPDGV~~Gn-------------y-RCSL~G~D---------------LNR~w~t- 503 (650)
T KOG3641|consen 454 EFLVSNSPLAQGLRESYVFKIVPMLNPDGVIVGN-------------Y-RCSLMGLD---------------LNRMWST- 503 (650)
T ss_pred HHhhcCCcHHHhhhhheeEecccccCCCceeccc-------------c-eeccccch---------------hhhhcCC-
Confidence 9999875544457789999999999999996431 0 33346777 9998851
Q ss_pred CCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHh----CCCeeEEEEeCCCCCccc-ccCCCCCC
Q psy15737 349 WGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILAN----NANMKAFVTFHSYGQYIL-YPWGYNKK 410 (444)
Q Consensus 349 W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~----~~~~~~~idlHs~g~~il-yP~g~~~~ 410 (444)
+.+.+-|+..+..++++.. ..++.+|+|+|+.++.+- +=||....
T Consensus 504 -----------------ps~~shPsi~~~k~li~~l~~~~~~~p~~Y~DlHgHSqK~n~FvYGnv~~ 553 (650)
T KOG3641|consen 504 -----------------PSPASHPSIYAVKQLIQQLSNVPHSRPLGYVDLHGHSQKVNHFVYGNVNE 553 (650)
T ss_pred -----------------CCcccchhHHhHHHHHhhhhcccccCceEeecccccccccceEEecCcCC
Confidence 2344668888888877765 235889999999998654 33555443
No 50
>cd06250 M14_PaAOTO_like An uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the the M14 family of metallocarboxypeptidases. This subgroup includes Pseudomonas aeruginosa AotO and related proteins. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD. The gene encoding
Probab=99.44 E-value=5e-13 Score=137.21 Aligned_cols=75 Identities=19% Similarity=0.302 Sum_probs=58.8
Q ss_pred eeeeecCC--ceEEEEEeecCCCCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeecCCCCcc
Q psy15737 222 DIGRSLEG--RPLRLVKISSGVPNAKAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYE 299 (444)
Q Consensus 222 ~iG~S~eG--R~I~~l~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~NPDGy~ 299 (444)
.+++++.| +.|++++|+... ..|+|+|.||+||+||.|+.++.+++++|..... ...| +-+|+|||++||+|+.
T Consensus 4 ~~~~~~~g~~~~ipv~~~~g~~-~gp~v~i~agiHGdE~~G~~~~~~L~~~l~~~~~--~~~l-~G~v~ivP~~Np~g~~ 79 (359)
T cd06250 4 PLPSPAPGTERELTVFRFGGAG-AGPKVYIQASLHADELPGMLVLHHLIELLKKLEA--EGRI-LGEITLVPVANPIGLN 79 (359)
T ss_pred ecccCCCCCeEEEEEEEEeCCC-CCCEEEEEeccccCchHHHHHHHHHHHHHhhhcc--cccc-CceEEEEeCcChHHHH
Confidence 45566556 678888886543 3699999999999999999999999999986422 1123 3489999999999996
Q ss_pred c
Q psy15737 300 Y 300 (444)
Q Consensus 300 ~ 300 (444)
.
T Consensus 80 ~ 80 (359)
T cd06250 80 Q 80 (359)
T ss_pred h
Confidence 4
No 51
>PF02244 Propep_M14: Carboxypeptidase activation peptide; InterPro: IPR003146 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively. In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. The peptidases are synthesised as inactive molecules, zymogens, with propeptides that must be removed by proteolytic cleavage to activate the enzyme. Structural studies of carboxypeptidases A and B reveal the propeptide to exist as a globular domain, followed by an extended alpha-helix; this shields the catalytic site, without specifically binding to it, while the substrate-binding site is blocked by making specific contacts [, ]. Members of this propeptide family are found in the metallocarboxypeptidases: A1, A2 [], A3, A4, A5, A6, U, insect gut carboxypeptidase and B [], and and are associated with peptidases belonging to MEROPS peptidase family M14A. Carboxypeptidases are found in abundance in pancreatic secretions. The pro-segment moiety (activation peptide) accounts for up to a quarter of the total length of the peptidase.; GO: 0004180 carboxypeptidase activity, 0006508 proteolysis; PDB: 3D68_C 3D67_B 3D66_A 1PBA_A 3GLJ_A 1NSA_A 1KWM_A 2BOA_B 1PYT_A 1JQG_A ....
Probab=99.40 E-value=7.4e-13 Score=105.45 Aligned_cols=65 Identities=25% Similarity=0.466 Sum_probs=59.8
Q ss_pred EEEEcCCHHHHHHHHHHHHh-----cCCC---CCeEEEEEcCccHHHHHHHHHhcCcceEEEeccHHHHhhhc
Q psy15737 108 LTSHISPAAFNLYFSDVVEK-----WGGS---TSNIDIMVKADKVAAVKQYLEKAKLTYEVILEDVQRAINEE 172 (444)
Q Consensus 108 ~rv~~~~~~q~~~L~~l~~~-----W~~~---~~~vdV~V~p~~~~~~~~~L~~~~i~~~v~i~dvq~~i~~~ 172 (444)
|||.|++++|+++|++|... |+.+ ++++||||||+.+..|+++|+..+|+|+|+|+|||++|++|
T Consensus 1 yrv~p~t~~q~~~L~~L~~~~~~dfW~~~~~~~~~~dv~V~p~~~~~f~~~L~~~~i~~~v~i~dvq~~Id~E 73 (74)
T PF02244_consen 1 YRVTPKTEEQLELLQELEQSNELDFWKEPSSVGRPVDVMVPPEKLEEFEELLKEHGIEYEVLIEDVQKLIDEE 73 (74)
T ss_dssp EEEEESSHHHHHHHHHHHHHSTEEEEESSSSTTSEEEEEEEGGGHHHHHHHHHHTT-EEEEEES-HHHHHHHH
T ss_pred CEEEeCCHHHHHHHHHHhcccceeeecCCCCCCCeEEEEECHHHHHHHHHHHHHCCCcEEEEeHHHHHHHHhc
Confidence 79999999999999999854 9987 59999999999999999999999999999999999999986
No 52
>COG2866 Predicted carboxypeptidase [Amino acid transport and metabolism]
Probab=99.37 E-value=3.8e-13 Score=138.47 Aligned_cols=185 Identities=23% Similarity=0.274 Sum_probs=120.4
Q ss_pred eEEEEeeeeecCCceEEEEEeecCCCCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhc----HHhhccceEEEEee
Q psy15737 217 LVTLTDIGRSLEGRPLRLVKISSGVPNAKAFWIDGGIHAREWITPATVSFILSELVENREAQ----EDYIKKIDFYVLPI 292 (444)
Q Consensus 217 ~v~~~~iG~S~eGR~I~~l~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~----~~lL~~~~~~IvP~ 292 (444)
++++..+|+|.+||....+........+++|+|.|+.|+| |..++.+++..|+..+.+. ..+++++++++||.
T Consensus 120 ~~~~~~~g~sv~GR~~~~i~~~~~~~~~~~i~~~~~~H~~---g~~~~~~~~~~li~r~~~~~~~~~~lld~~~~~vvp~ 196 (374)
T COG2866 120 LVELELIGRSVEGRDDPLITFPESNPEHKTILITAGQHAR---GEKMVEWFLYNLILRYLDPDVQVRKLLDRADLHVVPN 196 (374)
T ss_pred cceeeecCccccccccceeeecCCCCccceeeEecccccC---ccHHHHHHHHHHHHHhcCccchhhhhhccccEEEecc
Confidence 6889999999999954444444444578999999999997 7777888888888776655 45999999999999
Q ss_pred cCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCC-CCCC---CCCCCcccc-ccCCCC
Q psy15737 293 TNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFH-WGGV---GSSKEQCQQ-IYAGTG 367 (444)
Q Consensus 293 ~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~-W~~~---g~s~~pc~~-~y~G~~ 367 (444)
+||||+++++. | .+..|+| |||+|+.. |... ..-.+.|.+ ++.+..
T Consensus 197 ~NpDG~~~~~l-----r---------~na~~~d---------------Lnr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (374)
T COG2866 197 VNPDGSDLGNL-----R---------TNANGVD---------------LNRNFIAPNEEEGKEVYRWNDAALEFEDVVLF 247 (374)
T ss_pred cCCchhhhccc-----c---------cccCccc---------------hhhhccCCCcccchHHHhhhhhhccccccccc
Confidence 99999999874 2 2345777 99999631 1111 011233333 444444
Q ss_pred CCCHHHHHHHHHHH-HHhCCCeeEEEEeCCCCCcccccCCCCC-CCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15737 368 PFSEPETQAVSRFI-LANNANMKAFVTFHSYGQYILYPWGYNK-KVPPDYADLDRVGRAAAEAMRVAGG 434 (444)
Q Consensus 368 p~SepEtral~~~i-~~~~~~~~~~idlHs~g~~ilyP~g~~~-~~~~d~~~l~~la~~~a~ai~~~~g 434 (444)
.+...+.-+..-.+ ......+..|...| +.+-..|||.+.+ ..|.+.+-...+.....+++....+
T Consensus 248 ~~~~~~~~~~~p~i~~~~~~~~~~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (374)
T COG2866 248 LFDIHPDEGLFPEISVAGCELIAGYTPET-QEQPFLFGEALACAEDPRNTEYGEELSAEGRANLVLANG 315 (374)
T ss_pred cccCCccccccccccccccccccccceee-cccchhhhheeeccccccchhhhcccCccchhHHHHhhh
Confidence 43333333212222 11123566677766 7888899998885 4555655555555555555554444
No 53
>cd06233 Peptidase_M14-like_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=99.31 E-value=5.3e-11 Score=118.01 Aligned_cols=169 Identities=18% Similarity=0.255 Sum_probs=110.0
Q ss_pred CHHHHHHHHHHHHHhCCceEEEEee---eeecCCceEEEEEeecCCCCCceEEEeccccCCC-CccHHHHHHHHHHHHHh
Q psy15737 199 RMEDIHGYLDYLAQTYPQLVTLTDI---GRSLEGRPLRLVKISSGVPNAKAFWIDGGIHARE-WITPATVSFILSELVEN 274 (444)
Q Consensus 199 t~~ei~~~l~~la~~~p~~v~~~~i---G~S~eGR~I~~l~Is~~~~~kp~v~i~~giHgrE-~i~~~~~l~~i~~L~~~ 274 (444)
+|+|-.+-...-+++-.-.++-..+ |..-+--+|.++.|+... ..|+|+|++|+||.| .+|+.+++.+++++...
T Consensus 4 sY~eAR~kFl~aA~~aga~~~~~~~~~~gp~g~~l~i~v~~~g~~~-~~~~l~i~sGvHG~Eg~~Gs~~~~~ll~~~~~~ 82 (283)
T cd06233 4 SYAEAREKFLAAAKAAGAALESYVHPLLGPDGEALAIDVARLGPAD-AKRLLVITSGTHGVEGFCGSAIQLALLRELLPR 82 (283)
T ss_pred cHHHHHHHHHHHHHHcCccceeeeccCCCCCCceeeeeEEEEcCCC-CCcEEEEEecccCCcccchHHHHHHHHHhcchh
Confidence 5666666555555554433333222 332233468888887655 456999999999999 89999999999887632
Q ss_pred chhcHHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCCC
Q psy15737 275 REAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGS 354 (444)
Q Consensus 275 ~~~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g~ 354 (444)
.+..+..|++||++||.|+...+ +.+..||| |||||-........
T Consensus 83 -----~~~~~~~vi~vh~vNP~Gf~~~~---------------R~nedgvD---------------LNRnf~d~~~~~p~ 127 (283)
T cd06233 83 -----SLPAGVAVLLVHALNPYGFAHLR---------------RVNENNVD---------------LNRNFLDFSAPLPE 127 (283)
T ss_pred -----hccCCceEEEEeCcCHHHHhhcc---------------cCCCCCCC---------------hhhcccccCCCCCC
Confidence 34567899999999999996422 22335677 99999765443211
Q ss_pred C-----------------------------------------------CCccccccCCCCCCCHHHHHHHHHHHHHh--C
Q psy15737 355 S-----------------------------------------------KEQCQQIYAGTGPFSEPETQAVSRFILAN--N 385 (444)
Q Consensus 355 s-----------------------------------------------~~pc~~~y~G~~p~SepEtral~~~i~~~--~ 385 (444)
. ..|-.-.|-|..| +.-++.|+..+.++ .
T Consensus 128 N~~Y~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~G~~a~~~A~~~GQY~~P~GlfyGG~~p--~wS~~~L~~il~~~~~~ 205 (283)
T cd06233 128 NPGYAELHPLLLPPRWPPAAAAFAAKLLAYILKHGEKALKQALSGGQYTHPDGLFYGGTAP--QWSNRTLREILRRHLAG 205 (283)
T ss_pred CccHHHHhhhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCccccCCCCc--cHHHHHHHHHHHHhccc
Confidence 0 0111111335554 46677777777775 3
Q ss_pred CCeeEEEEeCCCCCcccccCCCCC
Q psy15737 386 ANMKAFVTFHSYGQYILYPWGYNK 409 (444)
Q Consensus 386 ~~~~~~idlHs~g~~ilyP~g~~~ 409 (444)
..-.++||+|+.-+ |||+..
T Consensus 206 ~~~v~~iD~HTGlG----p~g~~~ 225 (283)
T cd06233 206 AERVAWIDVHTGLG----PWGYGE 225 (283)
T ss_pred ccEEEEEEeCCCCC----CCCCCe
Confidence 46789999999865 677653
No 54
>cd06254 M14_ASTE_ASPA_like_4 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.27 E-value=1.3e-11 Score=123.14 Aligned_cols=123 Identities=15% Similarity=0.160 Sum_probs=83.6
Q ss_pred ceEEEEEeecCCCCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeecCCCCcccccccccccc
Q psy15737 230 RPLRLVKISSGVPNAKAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWR 309 (444)
Q Consensus 230 R~I~~l~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WR 309 (444)
-.|++.+|..+. ..|+|+|.||+||+|+.|..++..++++|-. ..+ +-+++++|++||.|++..
T Consensus 4 ~~~pv~~~~g~~-~gp~v~i~agvHG~E~~G~~~~~~l~~~l~~------~~~-~g~v~~vp~~N~~a~~~~-------- 67 (288)
T cd06254 4 LAIPVTLINGVN-PGPTLAITAGVHGGEYPGIQALQKLAREIDP------AKL-SGTLIIVHVLNLSGFYAR-------- 67 (288)
T ss_pred ccccEEEEeCCC-CCCEEEEEecccCCchhHHHHHHHHHHhCCc------ccC-eEEEEEEeCcCHHHHHhc--------
Confidence 356666775443 4589999999999999999999998887621 112 457899999999998642
Q ss_pred ccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHH-hCCCe
Q psy15737 310 KNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILA-NNANM 388 (444)
Q Consensus 310 Knr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~-~~~~~ 388 (444)
+|. ...+.|.| |||+||-.+. .|+ ++.++.++.+ ...+.
T Consensus 68 -~r~----~~~~d~~d---------------lNR~fpg~~~------------------g~~--~~r~a~~~~~~~~~~~ 107 (288)
T cd06254 68 -TPY----IVPEDGKN---------------LNRVFPGDKD------------------GTL--TERIAYFLTEEVIDKA 107 (288)
T ss_pred -Ccc----cCCCCCCc---------------hhhcCCCCCC------------------CCH--HHHHHHHHHHHHHhhC
Confidence 221 12345777 9999984321 122 3344444433 23467
Q ss_pred eEEEEeCCCC-CcccccCCCC
Q psy15737 389 KAFVTFHSYG-QYILYPWGYN 408 (444)
Q Consensus 389 ~~~idlHs~g-~~ilyP~g~~ 408 (444)
+++||||+++ ..-+.||.+.
T Consensus 108 d~~iDlHs~~~~~~~~p~~~~ 128 (288)
T cd06254 108 DFLIDLHSGDGNEQLRPYVYY 128 (288)
T ss_pred cEEEECCCCCCccccCceEEe
Confidence 8899999987 4556788654
No 55
>cd06255 M14_ASTE_ASPA_like_5 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.27 E-value=2.5e-11 Score=121.43 Aligned_cols=123 Identities=17% Similarity=0.301 Sum_probs=80.5
Q ss_pred eeeecCCce--EEEEEeecCCCCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeecCCCCccc
Q psy15737 223 IGRSLEGRP--LRLVKISSGVPNAKAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYEY 300 (444)
Q Consensus 223 iG~S~eGR~--I~~l~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~NPDGy~~ 300 (444)
+++...|.+ |+++.|..+. ..|+++|.||+||+|..|+.++..++++|.. ..++ -+++++|++||.|+..
T Consensus 2 ~~~~~~g~~~~~pv~~~~g~~-~gp~v~i~agvHG~E~~G~~~~~~l~~~l~~------~~~~-g~~~~vp~~N~~a~~~ 73 (293)
T cd06255 2 VGTMADGSAVALPVTILRGAE-PGPTLWLHAQVHGNEYNGTQAIVDLYRSLDP------AALK-GRLVALPTANPTALDA 73 (293)
T ss_pred cccCCCCCccceeEEEEeCCC-CCCEEEEEcccCCCcHHHHHHHHHHHHhCCH------hhcC-CeEEEEeCcCHHHHHh
Confidence 345555655 6667775443 4589999999999999999999999888742 2233 3778899999999974
Q ss_pred cccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCHHHHHHHHHH
Q psy15737 301 THTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPFSEPETQAVSRF 380 (444)
Q Consensus 301 ~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~~p~SepEtral~~~ 380 (444)
.. |.. .-.+.| |||.||-. .. | ..++..+.++.
T Consensus 74 ~~---------R~~-----p~d~~d---------------lNR~fpg~------~~--------g--~~~~r~A~~~~-- 106 (293)
T cd06255 74 RT---------RMS-----PFDELD---------------LNRTFPGN------PN--------G--MVTQQMAHALF-- 106 (293)
T ss_pred hc---------ccC-----CCCCCC---------------cccCCCCC------CC--------C--CHHHHHHHHHH--
Confidence 22 110 013566 99999721 00 1 12233333333
Q ss_pred HHHhCCCeeEEEEeCCCCCcc
Q psy15737 381 ILANNANMKAFVTFHSYGQYI 401 (444)
Q Consensus 381 i~~~~~~~~~~idlHs~g~~i 401 (444)
+......+++||||+.+..-
T Consensus 107 -~~~~~~~d~~iDlHs~~~~~ 126 (293)
T cd06255 107 -EEVRGVADYLVDLHTMTTIS 126 (293)
T ss_pred -HHHHhcCCEEEECCCCCCCC
Confidence 33333578999999997753
No 56
>cd06251 M14_ASTE_ASPA_like_1 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.21 E-value=3.3e-11 Score=120.26 Aligned_cols=120 Identities=15% Similarity=0.095 Sum_probs=77.6
Q ss_pred EEEEEeecCCCCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeecCCCCcccccccccccccc
Q psy15737 232 LRLVKISSGVPNAKAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKN 311 (444)
Q Consensus 232 I~~l~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKn 311 (444)
|+++.|..+. ..|+|+|.||+||+|+.|+.++..++++|... .+ +-+++++|++||.|+....
T Consensus 9 ~pv~~~~g~~-~gp~v~i~~giHGdE~~G~~~~~~l~~~l~~~------~~-~g~v~~vp~~Np~a~~~~~--------- 71 (287)
T cd06251 9 IPVHVIRGKK-PGPTLLLTAAIHGDELNGVEIIRRLLRQLDPK------TL-RGTVIAVPVVNVFGFLNQS--------- 71 (287)
T ss_pred eeEEEEeCCC-CCCEEEEEcCccCCchhHHHHHHHHHhcCCcc------cC-ceEEEEEeCCCHHHHHhcc---------
Confidence 4666664433 45899999999999999999998888876321 12 3477899999999997522
Q ss_pred CCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEE
Q psy15737 312 RRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAF 391 (444)
Q Consensus 312 r~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~ 391 (444)
|. ...|.| |||+||-.. ..+ ++.+....+++......+++
T Consensus 72 R~------~~d~~d---------------lNR~fpg~~------------------~g~-~~~~~a~~i~~~~~~~~d~~ 111 (287)
T cd06251 72 RY------LPDRRD---------------LNRSFPGSK------------------NGS-LASRIAHLFFTEILSHADYG 111 (287)
T ss_pred cc------CCCccC---------------HhhcCCCCC------------------CCC-HHHHHHHHHHHHHHhhCCEE
Confidence 11 113667 999998322 112 23332223333333458899
Q ss_pred EEeCCCCC-cccccCCCC
Q psy15737 392 VTFHSYGQ-YILYPWGYN 408 (444)
Q Consensus 392 idlHs~g~-~ilyP~g~~ 408 (444)
||||+++. .-..|+.+.
T Consensus 112 iDlHs~~~~~~~~~~v~~ 129 (287)
T cd06251 112 IDLHTGAIGRTNLPQIRA 129 (287)
T ss_pred EEcCCCCCCCCccceEEE
Confidence 99999974 334555543
No 57
>cd06230 M14_ASTE_ASPA_like The Peptidase M14 Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily belongs to the M14 family of metallocarboxypeptidases (MCPs), and includes ASTE, which catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) which cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.21 E-value=3.9e-11 Score=117.43 Aligned_cols=105 Identities=21% Similarity=0.166 Sum_probs=72.5
Q ss_pred EEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccC
Q psy15737 247 FWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDL 326 (444)
Q Consensus 247 v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~ 326 (444)
|+|.||+||+|+.|+.++..+++++.... ..+.+++++|++||+|++... | . + -.|
T Consensus 1 v~i~agiHG~E~~g~~~~~~l~~~~~~~~------~l~g~v~~vp~~N~~g~~~~~---------R------~-~-~~D- 56 (252)
T cd06230 1 VAVVGGVHGNEPCGVQAIRRLLAELDEGQ------ALRGPVKLVPAANPLALEAGQ---------R------Y-L-DRD- 56 (252)
T ss_pred CEEEcccCCCcHHHHHHHHHHHHHHhhhc------ccccEEEEEeCcCHHHHHhCC---------C------C-C-CcC-
Confidence 58999999999999999999999887542 235688999999999996421 1 1 1 177
Q ss_pred CCCCCCccccCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccccCC
Q psy15737 327 VTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWG 406 (444)
Q Consensus 327 ~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP~g 406 (444)
|||+||-.-. ...+|.+....+.+...+...++||+|+.+. ...|+.
T Consensus 57 --------------LNR~fpg~~~------------------~~~~~~~~a~~l~~~i~~~~d~~iDlH~~~~-~~~~~~ 103 (252)
T cd06230 57 --------------LNRIFPGDPD------------------SGTYEDRLAAELCPELEGLADAVLDLHSTSS-EGPPFI 103 (252)
T ss_pred --------------CCCCCCCCCC------------------CCCHHHHHHHHHHHHHhhhccEEEECCCCCC-CCCCEE
Confidence 9999982110 0123444444444444334789999999987 455654
Q ss_pred CC
Q psy15737 407 YN 408 (444)
Q Consensus 407 ~~ 408 (444)
+.
T Consensus 104 ~~ 105 (252)
T cd06230 104 LV 105 (252)
T ss_pred EE
Confidence 43
No 58
>cd06252 M14_ASTE_ASPA_like_2 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.09 E-value=4.8e-10 Score=113.39 Aligned_cols=121 Identities=16% Similarity=0.232 Sum_probs=81.8
Q ss_pred CceEEEEEeecCCCCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeecCCCCccccccccccc
Q psy15737 229 GRPLRLVKISSGVPNAKAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYEYTHTTERLW 308 (444)
Q Consensus 229 GR~I~~l~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~W 308 (444)
.-.|++..|..+. -|+|+|.||+||+|+.|..++..++++|-.. .+ .-.++++|++||-|+...
T Consensus 21 ~~~iPv~v~~g~~--gp~v~I~aGiHGdE~~G~~~~~~L~~~l~~~------~l-~G~vi~vP~~Np~a~~~~------- 84 (316)
T cd06252 21 TVMIPITVIKNGD--GPTVLLTGGNHGDEYEGQIALLRLARRLDPE------EV-RGRVIILPALNFPAVQAG------- 84 (316)
T ss_pred ceEeeEEEEeCCC--CCEEEEEccCCCCchHHHHHHHHHHHhCChh------hC-eEEEEEEeCCCHHHHHhc-------
Confidence 4577777775543 5899999999999999999999998887432 22 348899999999999632
Q ss_pred cccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHH-hCCC
Q psy15737 309 RKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILA-NNAN 387 (444)
Q Consensus 309 RKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~-~~~~ 387 (444)
.|.. .-.|.| |||.||-... ...| +.++.++.+ ..++
T Consensus 85 --~R~~-----p~D~~D---------------LNR~Fpg~~~-------------------gs~~-~riA~~i~~~l~~~ 122 (316)
T cd06252 85 --TRTS-----PIDGGN---------------LNRVFPGDPD-------------------GTVT-EMIAHYLTTELLPR 122 (316)
T ss_pred --cccC-----CCCCCc---------------HHhhCCCCCC-------------------CCHH-HHHHHHHHHhhhhc
Confidence 1110 013567 9999983211 1122 334444543 3467
Q ss_pred eeEEEEeCCCCCcc-cccCCC
Q psy15737 388 MKAFVTFHSYGQYI-LYPWGY 407 (444)
Q Consensus 388 ~~~~idlHs~g~~i-lyP~g~ 407 (444)
.+++||||+.+... .+|+.+
T Consensus 123 aD~~iDLHt~~~~~~~~p~~~ 143 (316)
T cd06252 123 ADYVIDLHSGGRSLDFLPFAL 143 (316)
T ss_pred CcEEEEccCCCCccccCCeEE
Confidence 89999999986544 346653
No 59
>cd06253 M14_ASTE_ASPA_like_3 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.08 E-value=5.5e-10 Score=112.14 Aligned_cols=123 Identities=20% Similarity=0.191 Sum_probs=80.3
Q ss_pred eEEEEEeecCCCCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeecCCCCccccccccccccc
Q psy15737 231 PLRLVKISSGVPNAKAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRK 310 (444)
Q Consensus 231 ~I~~l~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRK 310 (444)
.|...+++.+ .|+|+|.||+||+|+.|..++..++++|.......+..+ +-++++||++||-|+...
T Consensus 9 ~~~~~~~g~~---gp~v~i~agvHGdE~~G~~~~~~L~~~l~~~~~~~~~~l-~g~v~~vP~~N~~a~~~~--------- 75 (298)
T cd06253 9 RIEGFNFGGG---EKRICIVGGIHGDELQGLYICSLLIRFLKELEKRGPLKL-NGIVDVIPSVNPLGLNLG--------- 75 (298)
T ss_pred EEEeeecCCC---CcEEEEEccCccchHHHHHHHHHHHHHHhhhhccccccc-CceEEEEeCcCHHHHHHh---------
Confidence 4555666633 589999999999999999999999999976422111123 568999999999998641
Q ss_pred cCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeE
Q psy15737 311 NRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKA 390 (444)
Q Consensus 311 nr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~ 390 (444)
.|. ..-.|.| |||.||-.- ..+ + ++.++..+.+.-.+.++
T Consensus 76 ~R~-----~p~d~~d---------------lNR~Fpg~~------------------~g~-~-~~riA~~~~~~~~~~d~ 115 (298)
T cd06253 76 TRF-----WPTDNSD---------------INRMFPGDP------------------QGE-T-TQRIAAAVFEDVKGADY 115 (298)
T ss_pred hCc-----CCCCCCc---------------ccccCCCCC------------------CCc-H-HHHHHHHHHHHhcCCCE
Confidence 111 0113667 999998211 111 1 33344444433356789
Q ss_pred EEEeCCCCCccc-ccCC
Q psy15737 391 FVTFHSYGQYIL-YPWG 406 (444)
Q Consensus 391 ~idlHs~g~~il-yP~g 406 (444)
+||||+++...- +|+-
T Consensus 116 ~iDLHsg~~~~~~~p~v 132 (298)
T cd06253 116 CIDLHSSNIFLEEIPQV 132 (298)
T ss_pred EEEccCCCcccccCCeE
Confidence 999999765333 4543
No 60
>TIGR02994 ectoine_eutE ectoine utilization protein EutE. Members of this family, part of the succinylglutamate desuccinylase / aspartoacylase family (pfam04952), belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it the operon is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida.
Probab=99.02 E-value=1.5e-09 Score=110.09 Aligned_cols=121 Identities=17% Similarity=0.239 Sum_probs=80.2
Q ss_pred ceEEEEEeecCCCCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeecCCCCcccccccccccc
Q psy15737 230 RPLRLVKISSGVPNAKAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWR 309 (444)
Q Consensus 230 R~I~~l~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WR 309 (444)
-.|++..|..+ ..|+|+|.||+||+|+.|..++..++++|-.. .+ +=+++|||++||-|+....
T Consensus 35 ~~ipv~vi~~~--~gp~v~i~agvHGdE~~G~~~~~~L~~~l~~~------~l-~G~v~~vP~~N~~g~~~~~------- 98 (325)
T TIGR02994 35 VMIPITVIKNG--IGPTALLTGGNHGDEYEGPIALFELARTLDAE------DV-SGRIIIVPAMNYPAFRAGT------- 98 (325)
T ss_pred EEeeEEEEeCC--CCCEEEEEeccCCCchHHHHHHHHHHhhCChh------hC-cEEEEEEcCCCHHHHHhhC-------
Confidence 34555555433 35899999999999999999999999988321 23 3469999999999985421
Q ss_pred ccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCHHHHHHHHHHHH-HhCCCe
Q psy15737 310 KNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFIL-ANNANM 388 (444)
Q Consensus 310 Knr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~-~~~~~~ 388 (444)
|. ....|.| |||.|| |....+ . ++.++..+. +.....
T Consensus 99 --r~-----~p~d~~n---------------lNR~fP------------------G~~~gs-~-~~riA~~l~~~l~~~a 136 (325)
T TIGR02994 99 --RT-----SPIDRGN---------------LNRSFP------------------GRPDGT-V-TEKIADYFQRHLLPLA 136 (325)
T ss_pred --CC-----CCCCCCc---------------cCCCCC------------------CCCCCC-H-HHHHHHHHHHhHHhhC
Confidence 11 1123566 999998 222222 2 445555553 333568
Q ss_pred eEEEEeCCCCCc-ccccCCCC
Q psy15737 389 KAFVTFHSYGQY-ILYPWGYN 408 (444)
Q Consensus 389 ~~~idlHs~g~~-ilyP~g~~ 408 (444)
+++||||+.+.. -.+||.+.
T Consensus 137 D~~iDlHs~~~~~~~~P~v~~ 157 (325)
T TIGR02994 137 DIVLDFHSGGKTLDFVPFAAA 157 (325)
T ss_pred CEEEECCCCCccccccceEEE
Confidence 899999998863 34565543
No 61
>PF04952 AstE_AspA: Succinylglutamate desuccinylase / Aspartoacylase family; InterPro: IPR007036 This family describes both succinylglutamate desuccinylase that catalyses the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway and also includes aspartoacylase 3.5.1.15 from EC which cleaves acylaspartate into a fatty acid and aspartate. Mutations in P45381 from SWISSPROT lead to Canavan disease [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0008152 metabolic process; PDB: 3CDX_A 3FMC_A 3NA6_A 2BCO_B 3B2Y_A 3LWU_A 3IEH_A 2QVP_B 2G9D_A 1YW4_A ....
Probab=98.94 E-value=6.6e-10 Score=110.48 Aligned_cols=110 Identities=21% Similarity=0.305 Sum_probs=75.9
Q ss_pred ceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccc
Q psy15737 245 KAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGI 324 (444)
Q Consensus 245 p~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~Gv 324 (444)
|+++|.||+||+|+.|+.++..++++|-... ..-.++++|++||.|+.... |.. .-.|.
T Consensus 3 p~l~i~agvHGnE~~G~~a~~~L~~~l~~~~-------~~G~~~~vp~~N~~a~~~~~---------R~~-----~~d~~ 61 (292)
T PF04952_consen 3 PTLLITAGVHGNEYNGIEALQRLLRELDPAD-------LSGTVIIVPVANPPAFRQGT---------RFV-----PIDGR 61 (292)
T ss_dssp -EEEEEE-SSTTBCHHHHHHHHHHHHHHGGG-------CTCEEEEEEESSHHHHHHTS---------SSS-----TTTSS
T ss_pred CEEEEEcCcccChHHHHHHHHHHHhcchhcc-------cCCceEEEEEeCHHHHHhcc---------ccC-----CCCCC
Confidence 8999999999999999999999999886532 34578999999999996422 221 12366
Q ss_pred cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhC-CCeeEEEEeCCCCCcc
Q psy15737 325 DLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANN-ANMKAFVTFHSYGQYI 401 (444)
Q Consensus 325 D~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~-~~~~~~idlHs~g~~i 401 (444)
| |||.||-...+ ....+ +...-+++.++..+.+.. .+.+++||||+.+...
T Consensus 62 d---------------LNR~Fpg~~~~-~~~~~----------~~~~~~~~~ia~~l~~~~~~~aD~~iDLHs~~~~~ 113 (292)
T PF04952_consen 62 D---------------LNRCFPGDALG-SSLQE----------DYEATETERIAHALFEEILPDADYVIDLHSGSSSS 113 (292)
T ss_dssp B---------------GGGSTTHHHHC-HCTTH----------HHHHHHHHHHHHHHHHTTCCCGSEEEEEEEESSTB
T ss_pred C---------------HHHhCCCCccc-ccccc----------ccchhHHHHHHHHHhhhhhccceEEEEeccCCCCC
Confidence 6 99999832211 00011 112356777777777653 6899999999998754
No 62
>PRK02259 aspartoacylase; Provisional
Probab=98.76 E-value=1.9e-08 Score=100.56 Aligned_cols=102 Identities=21% Similarity=0.105 Sum_probs=65.6
Q ss_pred ceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccc
Q psy15737 245 KAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGI 324 (444)
Q Consensus 245 p~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~Gv 324 (444)
++|+|.||+||+|..|+.++..+++++... -+.. ..+++|+.||.|++... | ....
T Consensus 3 ~~v~i~aGvHGnE~~Gv~~v~~l~~~~~~~------~~~g-~~i~~~i~Np~A~~~~~---------R--------y~~~ 58 (288)
T PRK02259 3 NRVAIVGGTHGNEITGIYLVKKWQQQPNLI------NRKG-LEVQTVIGNPEAIEAGR---------R--------YIDR 58 (288)
T ss_pred cEEEEEcCccCChhHHHHHHHHHHhccccc------ccCc-cEEEEEeeCHHHHHhCC---------C--------CCcc
Confidence 689999999999999998887777765321 1223 35678899999996421 1 1235
Q ss_pred cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHh----CCCeeEEEEeCCCCC
Q psy15737 325 DLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILAN----NANMKAFVTFHSYGQ 399 (444)
Q Consensus 325 D~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~----~~~~~~~idlHs~g~ 399 (444)
| |||.||-...+. + ..+..|.+.-..+.... .+..+++||||+.+.
T Consensus 59 D---------------LNR~Fpg~~~~~-------------~-~~~~~e~~~A~~l~~~~~~~~~~~~D~~iDLHttts 108 (288)
T PRK02259 59 D---------------LNRSFRLDLLQN-------------P-DLSGYEQLRAKELVQQLGPKGNSPCDFIIDLHSTTA 108 (288)
T ss_pred c---------------CCCCCCCccccC-------------C-CCCCHHHHHHHHHHHHHhhccCccCcEEEECCCCCC
Confidence 7 999998432211 0 01224444444444333 247889999999754
No 63
>COG3608 Predicted deacylase [General function prediction only]
Probab=98.71 E-value=1.3e-07 Score=95.15 Aligned_cols=115 Identities=21% Similarity=0.330 Sum_probs=78.1
Q ss_pred EEEEeecCCCCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeecCCCCccccccccccccccC
Q psy15737 233 RLVKISSGVPNAKAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNR 312 (444)
Q Consensus 233 ~~l~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr 312 (444)
.++.++++ .-|+++|.||+||+|..|+.++.+++.+|-.. + + .=+++|||.+||-+++... |.|.
T Consensus 39 ~~~~~~~g--~gp~~~l~ag~HGdEl~G~~al~~Li~~L~~a-----~-i-~GtV~iVP~aN~~a~~~~~---R~~p--- 103 (331)
T COG3608 39 PVFVFGNG--PGPSVLLQAGVHGDELPGVIALRRLIPALDPA-----D-I-SGTVIIVPIANPPAFEAQG---RFSP--- 103 (331)
T ss_pred eEEEecCC--CCCEEEEEecccccccchHHHHHHHHHhcCHh-----h-c-CceEEEEeccCHHHHHhhc---ccCC---
Confidence 44555554 35899999999999999999999999998432 1 2 2389999999988886422 1211
Q ss_pred CCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHh-CCCeeEE
Q psy15737 313 RKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILAN-NANMKAF 391 (444)
Q Consensus 313 ~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~-~~~~~~~ 391 (444)
-.+.| +||+|| |... .| =|..+.++++.+ .+..++.
T Consensus 104 --------~d~~N---------------~NR~fP------g~~d------------gs--~t~ria~~l~r~L~~~aD~V 140 (331)
T COG3608 104 --------GDDTN---------------LNRAFP------GRPD------------GS--ATERIADRLKRLLLPLADIV 140 (331)
T ss_pred --------CCCCc---------------ccccCC------CCCC------------CC--HHHHHHHHHHHhhhcccCEE
Confidence 12445 999998 1111 11 144555666433 4467889
Q ss_pred EEeCCCCCcccc-cC
Q psy15737 392 VTFHSYGQYILY-PW 405 (444)
Q Consensus 392 idlHs~g~~ily-P~ 405 (444)
+|||+.+.-..+ ||
T Consensus 141 lDlHsg~~~~~~~~~ 155 (331)
T COG3608 141 LDLHSGGEGLDYLPY 155 (331)
T ss_pred EEccCCCCcccccce
Confidence 999999987664 35
No 64
>PRK05324 succinylglutamate desuccinylase; Provisional
Probab=98.68 E-value=9.6e-08 Score=97.24 Aligned_cols=59 Identities=17% Similarity=0.338 Sum_probs=42.9
Q ss_pred EeecCCCCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeecCCCCccc
Q psy15737 236 KISSGVPNAKAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYEY 300 (444)
Q Consensus 236 ~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~NPDGy~~ 300 (444)
.+.......|.|+|.||+||+|+.|+.++..++++|.... +.-... +++|+.||.++..
T Consensus 39 ~~~p~~~~gp~v~IsaGvHGNE~~Gi~~l~~Ll~~l~~~~-----~~~~~~-v~~i~~Np~A~~~ 97 (329)
T PRK05324 39 ELTPAAPSTKALVLSAGIHGNETAPIELLDQLVRDLLAGE-----LPLRAR-LLVILGNPPAMRA 97 (329)
T ss_pred EeecCCCCCCeEEEECCcccCcHHHHHHHHHHHHhhhccc-----cccCce-EEEEecCHHHHHh
Confidence 3333334568999999999999999999999998886531 111223 5566999999963
No 65
>cd03855 M14_ASTE Peptidase M14 Succinylglutamate desuccinylase (ASTE, also known as N-succinyl-L-glutamate amidohydrolase, N2-succinylglutamate desuccinylase, and SGDS; EC 3.5.1.96) belongs to the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily of the M14 family of metallocarboxypeptidases. This group includes succinylglutamate desuccinylase that catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. It hydrolyzes N-succinyl-L-glutamate to succinate and L-glutamate.
Probab=98.64 E-value=1.2e-07 Score=96.34 Aligned_cols=60 Identities=17% Similarity=0.334 Sum_probs=44.3
Q ss_pred EEeecCCCCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeecCCCCccc
Q psy15737 235 VKISSGVPNAKAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYEY 300 (444)
Q Consensus 235 l~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~NPDGy~~ 300 (444)
|.+.......|+|+|.||+||+|+.|+.++..++++|.... +..-.-+++|+.||-++..
T Consensus 33 l~~~p~~~~gp~v~IsaGvHGNE~~Gi~~l~~ll~~l~~~~------l~~~~~v~~~~~Np~A~~~ 92 (322)
T cd03855 33 LELTPAAPATKAIVISAGVHGNETAPIEILNQLIKDLLAGE------LPLAHRLLFIFGNPPAMRA 92 (322)
T ss_pred EEEeCCCCCCCeEEEEccccCCchhHHHHHHHHHHhhhhcc------ccCCeEEEEEeeCHHHHHh
Confidence 44444434568999999999999999999999999886531 2212235677899999863
No 66
>cd06909 M14_ASPA Aspartoacylase (ASPA) belongs to the Succinylglutamate desuccinylase/aspartoacylase subfamily of the M14 family of metallocarboxypeptidases. ASPA (also known as aminoacylase 2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=98.56 E-value=1.4e-07 Score=93.96 Aligned_cols=100 Identities=18% Similarity=0.061 Sum_probs=62.2
Q ss_pred ceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccc
Q psy15737 245 KAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGI 324 (444)
Q Consensus 245 p~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~Gv 324 (444)
++|+|.||+||+|..|+.++..+++++... .+.. ..+++|+.||-+++.. . .....
T Consensus 1 ~~v~I~aGvHGnE~~Gv~~v~~l~~~~~~~------~~~~-~~v~~~i~Np~A~~~~---------~--------Ry~d~ 56 (282)
T cd06909 1 KRVAIVGGTHGNELTGVYLVKKWLQQPELI------QRPS-LEVHPVIANPRAVEAC---------R--------RYIDT 56 (282)
T ss_pred CeEEEEcCccCChHHHHHHHHHHHhccccc------ccCC-eEEEEEecCHHHHHhC---------C--------ccCCC
Confidence 469999999999999988887777765321 1222 3345667899998531 1 12246
Q ss_pred cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCC----CeeEEEEeCCC
Q psy15737 325 DLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNA----NMKAFVTFHSY 397 (444)
Q Consensus 325 D~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~----~~~~~idlHs~ 397 (444)
| |||.|+-.+.+. +. .+.+|.+....+.+...+ ..+++||||+.
T Consensus 57 D---------------LNR~Fpg~~~~~-------------~~-~~~~e~~~A~~l~~~l~~~~~~~~D~~iDLHst 104 (282)
T cd06909 57 D---------------LNRCFTLENLSN-------------SE-LLPYEVKRAKELNQKLGPKGNSPCDFVIDLHNT 104 (282)
T ss_pred C---------------CCCCCCCCccCC-------------CC-CCCHHHHHHHHHHHHHhhccCCCceEEEECCCC
Confidence 7 999998433211 01 122444444444443322 47899999997
No 67
>PF10994 DUF2817: Protein of unknown function (DUF2817); InterPro: IPR021259 This family of proteins has no known function.
Probab=98.48 E-value=7.4e-06 Score=83.70 Aligned_cols=180 Identities=19% Similarity=0.252 Sum_probs=114.2
Q ss_pred CHHHHHHHHHHHHHhCCceEEEEee---eeecCCceEEEEEeecCCCCCceEEEeccccCCC-CccHHHHHHHHHHHHHh
Q psy15737 199 RMEDIHGYLDYLAQTYPQLVTLTDI---GRSLEGRPLRLVKISSGVPNAKAFWIDGGIHARE-WITPATVSFILSELVEN 274 (444)
Q Consensus 199 t~~ei~~~l~~la~~~p~~v~~~~i---G~S~eGR~I~~l~Is~~~~~kp~v~i~~giHgrE-~i~~~~~l~~i~~L~~~ 274 (444)
+|++-.+-....++.-+-.++-..+ |-.-|.--|-++.+++.. .+..+++++|.||=| ..|++.-+.+++.+.
T Consensus 4 sY~~AR~~Fl~aA~~~ga~~~~~~~p~~G~~ge~L~~Dva~lg~~~-a~~lLv~~SGtHGVEGf~GSaiQ~~~L~~~~-- 80 (341)
T PF10994_consen 4 SYAEARERFLAAAEAAGAKLESYPHPLRGPDGEDLATDVAWLGPKD-ASRLLVLTSGTHGVEGFAGSAIQIALLREDL-- 80 (341)
T ss_pred cHHHHHHHHHHHHHHcCCcceeeeCCCCCCCCCcceeEEEEecCCC-CCeEEEEEecCCcccccccHHHHHHHHHccc--
Confidence 5666666666666666544443333 333333446667777654 445899999999999 667777777777752
Q ss_pred chhcHHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCC-C
Q psy15737 275 REAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGV-G 353 (444)
Q Consensus 275 ~~~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~-g 353 (444)
...+..++-+++|=.+||-|+.+.+ |.+-.+|| |||||-- +... .
T Consensus 81 ---~~~~~~~~avllVHAlNPyGfa~~R---------------R~nE~NVD---------------LNRNfld-f~~~~p 126 (341)
T PF10994_consen 81 ---ARSLPAGVAVLLVHALNPYGFAWLR---------------RVNENNVD---------------LNRNFLD-FSQPLP 126 (341)
T ss_pred ---ccccCCCCeEEEEEccCccccceee---------------ccCCcCcC---------------cccccCc-ccCCCC
Confidence 2245678899999999999998643 23334555 9999972 2211 1
Q ss_pred C-------------C-----------------------------------CCccccccCCCCCCCHHHHHHHHHHHHHh-
Q psy15737 354 S-------------S-----------------------------------KEQCQQIYAGTGPFSEPETQAVSRFILAN- 384 (444)
Q Consensus 354 ~-------------s-----------------------------------~~pc~~~y~G~~p~SepEtral~~~i~~~- 384 (444)
+ + ..|-.-.|-|..| +.-++.|+.+++++
T Consensus 127 ~N~~Y~~l~~~l~p~~~~~~~~~~~~~~l~~~~~~~G~~a~~~av~~GQY~~P~GlfYGG~~p--~wS~~~L~~il~~~~ 204 (341)
T PF10994_consen 127 ANPGYEELHPLLNPSDWPPPADAAAFAALAKYIARHGFAAFKQAVSGGQYTHPDGLFYGGTEP--EWSNRTLREILREHL 204 (341)
T ss_pred CCccHHHHHHhhCCCCCCchhhHHHHHHHHHHHHHHhHHHHHHHHhCcCcCCCCccccCCCCc--cHHHHHHHHHHHHHh
Confidence 0 0 1222223456665 56777888888776
Q ss_pred -CCCeeEEEEeCCCCCcccccCCCCC---CCCCCHHHHHHH
Q psy15737 385 -NANMKAFVTFHSYGQYILYPWGYNK---KVPPDYADLDRV 421 (444)
Q Consensus 385 -~~~~~~~idlHs~g~~ilyP~g~~~---~~~~d~~~l~~l 421 (444)
...-.++||+|++-+ |||+.. ..+++...+..+
T Consensus 205 ~~~~~v~~iDlHTGlG----p~G~~~~i~~~~~~~~~~~~a 241 (341)
T PF10994_consen 205 AGAERVAWIDLHTGLG----PYGHGELICDGPPDSAALERA 241 (341)
T ss_pred hcCcEEEEEEeCCCCC----CCCceEEEecCCCChHHHHHH
Confidence 346789999999866 677653 344555544443
No 68
>cd06256 M14_ASTE_ASPA_like_6 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=98.47 E-value=3.8e-07 Score=92.79 Aligned_cols=56 Identities=16% Similarity=0.175 Sum_probs=40.3
Q ss_pred EEeecCCCCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeecCCCCccc
Q psy15737 235 VKISSGVPNAKAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYEY 300 (444)
Q Consensus 235 l~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~NPDGy~~ 300 (444)
+.| +|... |+|+|.||+||+|..|+.++..+++++... -+... .++++.||-++..
T Consensus 27 i~i-~G~~~-p~v~I~aGvHGNE~~Gi~al~~ll~~~~~~------~~~~~--~~l~i~Np~A~~~ 82 (327)
T cd06256 27 IHL-PGRRS-PPLFVSTLLHGNEPTGLQAVQRLLKALEAR------PLPRS--LLLFIGNVAAALA 82 (327)
T ss_pred EEE-eCCCC-CeEEEEccccCCcHHHHHHHHHHHHhCChh------hcCCc--EEEEEeCHHHHHh
Confidence 344 34444 899999999999999999988877776422 13344 4456799999963
No 69
>cd06910 M14_ASTE_ASPA_like_7 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=98.47 E-value=1.8e-07 Score=92.81 Aligned_cols=113 Identities=14% Similarity=0.118 Sum_probs=68.6
Q ss_pred ceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccc
Q psy15737 245 KAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGI 324 (444)
Q Consensus 245 p~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~Gv 324 (444)
|+|+|.||+||+|..|+.++..++++ ....|.. +++++ ++||-++.... -++|. ...-.+.
T Consensus 1 P~v~isagvHGnE~~Gi~al~~l~~~-------~~~~l~G-~li~~-~~N~~A~~~~~--------~~~p~--~~R~~~~ 61 (272)
T cd06910 1 PHVMINALVHGNEICGAIALDALLRE-------GLRPRRG-RLTLA-FANVAAYARFD--------PNNPT--ASRFVDE 61 (272)
T ss_pred CEEEEEcCcccChHHHHHHHHHHHhC-------cccccCC-CEEEE-EECHHHHHhcc--------cCCCc--ccccCCC
Confidence 78999999999999999999887763 1122443 45555 79999985311 01111 1122345
Q ss_pred cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCccccc
Q psy15737 325 DLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYP 404 (444)
Q Consensus 325 D~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~~ilyP 404 (444)
| |||.||=.|.. |+. ...|.+....+ ...-.+.+++||||+.+.. .+|
T Consensus 62 d---------------LNR~Fpg~~~~-------------g~~--~~~e~~~A~~l-~~~i~~aD~~iDLHt~~~~-~~p 109 (272)
T cd06910 62 D---------------MNRVWSPDVLD-------------GPR--DSIELRRAREL-RPVIDTADYLLDLHSMQWP-SPP 109 (272)
T ss_pred C---------------cCCCCCCcccC-------------CCc--ccHHHHHHHHH-HHHHhhCCEEEECCCCCCC-CCC
Confidence 6 99999843311 111 12444443333 3322467899999999884 567
Q ss_pred CCCC
Q psy15737 405 WGYN 408 (444)
Q Consensus 405 ~g~~ 408 (444)
+.+.
T Consensus 110 ~~~~ 113 (272)
T cd06910 110 LILA 113 (272)
T ss_pred EEEe
Confidence 6654
No 70
>TIGR03242 arg_catab_astE succinylglutamate desuccinylase. Members of this protein family are succinylglutamate desuccinylase, the fifth and final enzyme of the arginine succinyltransferase (AST) pathway for arginine catabolism. This model excludes the related protein aspartoacylase.
Probab=98.33 E-value=1.9e-06 Score=87.41 Aligned_cols=52 Identities=21% Similarity=0.391 Sum_probs=39.6
Q ss_pred CCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeecCCCCcc
Q psy15737 242 PNAKAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYE 299 (444)
Q Consensus 242 ~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~NPDGy~ 299 (444)
..-|+|+|.||+||+|+.|+.++..+++++.... +.-...+.+ ++.||.|+.
T Consensus 39 ~~gp~v~IsaGvHGNE~~Gi~~l~~ll~~l~~~~-----~~~~~~l~~-i~~Np~A~~ 90 (319)
T TIGR03242 39 PPQKSLVISAGIHGNETAPIEILEQLLGDIAAGK-----LPLRVRLLV-ILGNPPAMR 90 (319)
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHhhhhhcc-----ccCCceEEE-EEcCHHHHH
Confidence 4458999999999999999999999988876431 112344544 478999996
No 71
>COG2988 Succinylglutamate desuccinylase [Amino acid transport and metabolism]
Probab=97.61 E-value=0.00017 Score=71.23 Aligned_cols=148 Identities=16% Similarity=0.200 Sum_probs=87.2
Q ss_pred HHHHhCCceEEEEeeeeec--CCceEEEEEeecCCCCCceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccce
Q psy15737 209 YLAQTYPQLVTLTDIGRSL--EGRPLRLVKISSGVPNAKAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKID 286 (444)
Q Consensus 209 ~la~~~p~~v~~~~iG~S~--eGR~I~~l~Is~~~~~kp~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~ 286 (444)
.|.-+.|-.++.+..|... -|+- ++++.+....-..+.|.|||||+|..+.+.+-.++..+..++-.- .+.
T Consensus 8 tl~~~~p~v~q~~~~g~~~~wl~~g--~le~~p~~~r~~~lvIsaGiHGNEtapvEll~kl~~~~~ag~~p~-----a~r 80 (324)
T COG2988 8 TLSGKKPVVTQREINGVRWRWLGEG--VLELTPLAPRDGSLVISAGIHGNETAPVELLDKLQQKISAGQLPL-----AWR 80 (324)
T ss_pred hhcCCCCeeeeeccCceEEEEeccc--eeeeccCCCCCCceEEEecccCCccCcHHHHHHHHhhhhhcccCc-----cee
Confidence 3556677555544444332 2222 233333221112699999999999999999999999888764321 223
Q ss_pred EEEEeecCCCCccccccccccccccCCCCCCCCCCccccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q psy15737 287 FYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGT 366 (444)
Q Consensus 287 ~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~GvD~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~ 366 (444)
..+ -+-||-..+. + ....--| |||-|+-.|.. |.+.
T Consensus 81 ~L~-ilgNP~Ai~~----------g-------kRYieqD---------------lNR~F~gr~q~-----------~~~n 116 (324)
T COG2988 81 CLV-ILGNPPAIAA----------G-------KRYIEQD---------------LNRMFGGRPQS-----------FSEN 116 (324)
T ss_pred EEE-EecCcHHHHh----------c-------hHHHhhh---------------HHHHhCCCccc-----------CCCC
Confidence 223 3679987642 1 1123457 99999876642 2221
Q ss_pred CCCCHHH-HHHHHHHHHHhCCCeeEEEEeCCCC------CcccccCCC
Q psy15737 367 GPFSEPE-TQAVSRFILANNANMKAFVTFHSYG------QYILYPWGY 407 (444)
Q Consensus 367 ~p~SepE-tral~~~i~~~~~~~~~~idlHs~g------~~ilyP~g~ 407 (444)
..++.-| -+++..|...-..++++.+|+|+-- +..++||-.
T Consensus 117 e~~ra~eler~~q~ff~~~~~~vr~h~DLHtairgs~h~~f~~~P~~~ 164 (324)
T COG2988 117 ETLRAYELERALQDFFQQGKESVRWHLDLHTAIRGSGHPQFGVLPQPD 164 (324)
T ss_pred chhhhHHHHHHHHHHHhcCCCcceEEEEhhhhhhccCCcceeeCCCCC
Confidence 1222222 3456666666567899999999852 344566544
No 72
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=97.48 E-value=4.4e-05 Score=57.41 Aligned_cols=31 Identities=26% Similarity=0.413 Sum_probs=20.9
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
.|+.|+|++||++|||++++|.+|+||.++|
T Consensus 26 ~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 26 YGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp HT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred cCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 5899999999999999999999999999876
No 73
>PF09892 DUF2119: Uncharacterized protein conserved in archaea (DUF2119); InterPro: IPR019218 This entry represents a family of hypothetical archaeal proteins of unknown function.
Probab=96.99 E-value=0.0019 Score=60.22 Aligned_cols=82 Identities=15% Similarity=0.303 Sum_probs=56.4
Q ss_pred ceEEEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeecCCCCccccccccccccccCCCCCCCCCCccc
Q psy15737 245 KAFWIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYEYTHTTERLWRKNRRKSPKGDSCSGI 324 (444)
Q Consensus 245 p~v~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~NPDGy~~~~~~dr~WRKnr~~~~~~~~c~Gv 324 (444)
|+=++.||+||+||-.+.-++ .+|.. ..+++-.++|+|+++ +|-.++.
T Consensus 7 p~rLFvgGlHG~Egk~t~~iL---~~l~~------~~~~~G~l~i~plv~-~~kYiST---------------------- 54 (193)
T PF09892_consen 7 PKRLFVGGLHGDEGKDTSPIL---KRLKP------NDFNNGNLIIIPLVE-NSKYIST---------------------- 54 (193)
T ss_pred ceEEEEeeccCcchhhHHHHH---HHhCc------ccccCceEEEEeCCC-CCCceee----------------------
Confidence 777999999999997765544 44432 234446899999444 4543322
Q ss_pred cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCC
Q psy15737 325 DLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQ 399 (444)
Q Consensus 325 D~~~~d~~~~~~~gvDLNRNf~~~W~~~g~s~~pc~~~y~G~~p~SepEtral~~~i~~~~~~~~~~idlHs~g~ 399 (444)
|+..| | ..++-+.+.+++.++ ++.+|+-+|+|+.
T Consensus 55 ----------------L~~~Y-----------------Y------~s~~Gk~il~lIe~y--~P~~Y~ElHsY~~ 88 (193)
T PF09892_consen 55 ----------------LDPEY-----------------Y------KSEMGKKILDLIEKY--KPEFYFELHSYSK 88 (193)
T ss_pred ----------------cCHHH-----------------h------cchhhhHHHHHHHHh--CCceEEEEeecCH
Confidence 55554 1 123567799999999 6688999999975
No 74
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=95.94 E-value=0.0037 Score=46.16 Aligned_cols=31 Identities=35% Similarity=0.528 Sum_probs=24.7
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
+|+.|+|++|+++|+|++..|.+|+||...|
T Consensus 11 ~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A 41 (54)
T PF13637_consen 11 SGNLEIVKLLLEHGADINAQDEDGRTPLHYA 41 (54)
T ss_dssp TT-HHHHHHHHHTTSGTT-B-TTS--HHHHH
T ss_pred hCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 6899999999999999999999999999887
No 75
>KOG0514|consensus
Probab=95.80 E-value=0.0053 Score=62.57 Aligned_cols=33 Identities=30% Similarity=0.425 Sum_probs=29.7
Q ss_pred CCCchHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 1 MSHTEKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 1 ~~~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
.||||.++|..||.-|||++|.|.||-|+.=-|
T Consensus 348 VSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA 380 (452)
T KOG0514|consen 348 VSHGRVDMVKALLACGADVNIQDDDGSTALMCA 380 (452)
T ss_pred hhcCcHHHHHHHHHccCCCccccCCccHHHhhh
Confidence 489999999999999999999999999976433
No 76
>KOG2505|consensus
Probab=95.65 E-value=0.022 Score=60.14 Aligned_cols=40 Identities=18% Similarity=0.433 Sum_probs=36.8
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCccccccCchHHHHHH
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVCKHNDEARKLL 43 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~~~~~~~~~l 43 (444)
.|-+++|+.||+.|+|+++.||.|+||+++. .+++|+..+
T Consensus 440 qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls-~nkdVk~~F 479 (591)
T KOG2505|consen 440 QGARKCVKYFLEEGCDPSTKDGAGRTPYSLS-ANKDVKSIF 479 (591)
T ss_pred cchHHHHHHHHHhcCCchhcccCCCCccccc-ccHHHHHHH
Confidence 3667899999999999999999999999999 799999885
No 77
>COG4073 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.37 E-value=0.03 Score=51.35 Aligned_cols=42 Identities=24% Similarity=0.267 Sum_probs=31.8
Q ss_pred EEeccccCCCCccHHHHHHHHHHHHHhchhcHHhhccceEEEEeecCCCCcc
Q psy15737 248 WIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYE 299 (444)
Q Consensus 248 ~i~~giHgrE~i~~~~~l~~i~~L~~~~~~~~~lL~~~~~~IvP~~NPDGy~ 299 (444)
++.||+||+||-.++-++. +..|-. .+-++.|+|.+|+--|.
T Consensus 18 lfV~GlHGdEgk~te~ilr-l~~~~~---------~ng~l~Vip~v~n~~YI 59 (198)
T COG4073 18 LFVGGLHGDEGKATEPILR-LRVLPE---------ENGVLRVIPKVENGPYI 59 (198)
T ss_pred EEEeeccCcccchhhhhhh-hcccCc---------cCceEEEEeccCCCCce
Confidence 8999999999999888876 332211 35688899988887764
No 78
>KOG4214|consensus
Probab=95.16 E-value=0.018 Score=48.38 Aligned_cols=39 Identities=26% Similarity=0.405 Sum_probs=35.9
Q ss_pred chHHHHHHHHhcCCcceeecCCCCCccccccCchHHHHHH
Q psy15737 4 TEKDIVCLLVSKNANINIVNGEGRTPRDVCKHNDEARKLL 43 (444)
Q Consensus 4 ~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~~~~~~~~~l 43 (444)
|-.++|.|||+.|||-|+.--+|++.-+-| +..+|+.||
T Consensus 78 GH~~cVklLL~~GAdrt~~~PdG~~~~eat-e~edIr~LL 116 (117)
T KOG4214|consen 78 GHRDCVKLLLQNGADRTIHAPDGTALIEAT-EEEDIRELL 116 (117)
T ss_pred hhHHHHHHHHHcCcccceeCCCchhHHhhc-cHHHHHHHh
Confidence 567899999999999999999999999999 889999887
No 79
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=94.25 E-value=0.031 Score=37.01 Aligned_cols=22 Identities=36% Similarity=0.481 Sum_probs=20.0
Q ss_pred CchHHHHHHHHhcCCcceeecC
Q psy15737 3 HTEKDIVCLLVSKNANINIVNG 24 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~ 24 (444)
+|+.++|.+||++|||++++|.
T Consensus 12 ~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 12 RGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TTCHHHHHHHHHTTSCTTCBCT
T ss_pred HHHHHHHHHHHHCcCCCCCCCC
Confidence 5789999999999999999874
No 80
>PF13606 Ank_3: Ankyrin repeat
Probab=94.15 E-value=0.02 Score=37.54 Aligned_cols=20 Identities=30% Similarity=0.436 Sum_probs=17.8
Q ss_pred CCchHHHHHHHHhcCCccee
Q psy15737 2 SHTEKDIVCLLVSKNANINI 21 (444)
Q Consensus 2 ~~~~~~~v~~ll~~~a~~~~ 21 (444)
+.|+.|+|++||++|||++.
T Consensus 11 ~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 11 SNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred HhCCHHHHHHHHHcCCCCCC
Confidence 46899999999999999873
No 81
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=93.93 E-value=0.051 Score=61.37 Aligned_cols=74 Identities=15% Similarity=0.278 Sum_probs=49.9
Q ss_pred HHHHHHHHhcCCcceeecCCCCCccccc-----cCchHHHHHHHHHHHhhhHHH----HHHHHHHHhccchhhhcchhhH
Q psy15737 6 KDIVCLLVSKNANINIVNGEGRTPRDVC-----KHNDEARKLLLAAEKTEGIQR----EHKFLNAARANDLESLNSLAVI 76 (444)
Q Consensus 6 ~~~v~~ll~~~a~~~~~~~~g~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~----~~~~l~~~r~g~~~~l~~~~~~ 76 (444)
.|+|.+||++|||++.+|..|+||.-.| +.+++|.++|.........+. -..++.||+.|+++.+..|+.
T Consensus 227 ~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe- 305 (764)
T PHA02716 227 ASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQ- 305 (764)
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHh-
Confidence 4899999999999999999999998643 235677777533211111111 123456899999988877775
Q ss_pred hhhhh
Q psy15737 77 EKGVL 81 (444)
Q Consensus 77 ~e~~~ 81 (444)
.|+.
T Consensus 306 -~GAd 309 (764)
T PHA02716 306 -PGVK 309 (764)
T ss_pred -CCCc
Confidence 3543
No 82
>KOG0505|consensus
Probab=93.01 E-value=0.1 Score=55.71 Aligned_cols=45 Identities=24% Similarity=0.355 Sum_probs=36.8
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCccccccCchHHHHHHHHHHH
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVCKHNDEARKLLLAAEK 48 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~ 48 (444)
-|--.||..|+++||+..++|++|..|.|++ .++.-..+|+++-.
T Consensus 116 cg~~~i~~~li~~gA~~~avNsdg~~P~dl~-e~ea~~~~l~~~~~ 160 (527)
T KOG0505|consen 116 CGYLNIVEYLIQHGANLLAVNSDGNMPYDLA-EDEATLDVLETEMA 160 (527)
T ss_pred cccHHHHHHHHHhhhhhhhccCCCCCccccc-cCcchhHHHHHHHH
Confidence 3556899999999999999999999999999 77766666644433
No 83
>KOG4412|consensus
Probab=92.88 E-value=0.065 Score=50.19 Aligned_cols=30 Identities=33% Similarity=0.461 Sum_probs=18.0
Q ss_pred CCchHHHHHHHHhcCCcceeecCCCCCccc
Q psy15737 2 SHTEKDIVCLLVSKNANINIVNGEGRTPRD 31 (444)
Q Consensus 2 ~~~~~~~v~~ll~~~a~~~~~~~~g~~~~~ 31 (444)
+.||-||+++||++||.+.|.|.-||||.-
T Consensus 115 gK~r~eIaqlLle~ga~i~~kD~~~qtplH 144 (226)
T KOG4412|consen 115 GKGRLEIAQLLLEKGALIRIKDKQGQTPLH 144 (226)
T ss_pred cCChhhHHHHHHhcCCCCcccccccCchhH
Confidence 345666666666666666666666666643
No 84
>PHA02859 ankyrin repeat protein; Provisional
Probab=92.66 E-value=0.046 Score=51.86 Aligned_cols=30 Identities=17% Similarity=0.361 Sum_probs=22.2
Q ss_pred chHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 4 TEKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 4 ~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
+..|+|.+||++|||++.+|..|+||...+
T Consensus 101 ~~~eiv~~Ll~~gadin~~d~~G~TpLh~a 130 (209)
T PHA02859 101 VEPEILKILIDSGSSITEEDEDGKNLLHMY 130 (209)
T ss_pred ccHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 356777778888888888888888877653
No 85
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=92.63 E-value=0.069 Score=42.83 Aligned_cols=31 Identities=29% Similarity=0.386 Sum_probs=27.1
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
.|..|+|.+|+++|||++..|.+|+||...|
T Consensus 36 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 66 (89)
T PF12796_consen 36 NGNLEIVKLLLENGADINSQDKNGNTALHYA 66 (89)
T ss_dssp TTTHHHHHHHHHTTTCTT-BSTTSSBHHHHH
T ss_pred cCCHHHHHHHHHhcccccccCCCCCCHHHHH
Confidence 4778999999999999999999999998776
No 86
>PHA02791 ankyrin-like protein; Provisional
Probab=92.53 E-value=0.093 Score=52.56 Aligned_cols=73 Identities=16% Similarity=0.152 Sum_probs=51.0
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCccccccC--chHHHHHHHHHHH-hhhH-H--HHHHHHHHHhccchhhhcchhh
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVCKH--NDEARKLLLAAEK-TEGI-Q--REHKFLNAARANDLESLNSLAV 75 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~~--~~~~~~~l~~~~~-~~~~-~--~~~~~l~~~r~g~~~~l~~~~~ 75 (444)
.|..|+|.+||++||+++..|.+|+||..+|-. ..++-++|..... -..+ + ...-|..||+.|+++-+.-|+.
T Consensus 71 ~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~ 149 (284)
T PHA02791 71 LEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLS 149 (284)
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHh
Confidence 578899999999999999999999999887722 2455555432221 1111 1 1245778999999987777765
No 87
>PHA02874 ankyrin repeat protein; Provisional
Probab=92.41 E-value=0.13 Score=54.06 Aligned_cols=73 Identities=19% Similarity=0.322 Sum_probs=45.0
Q ss_pred hHHHHHHHHhcCCcceeecCCCCCcccccc----CchHHHHHHHHH-HHhhhHH-HHHHHHHHHhccchhhhcchhhHh
Q psy15737 5 EKDIVCLLVSKNANINIVNGEGRTPRDVCK----HNDEARKLLLAA-EKTEGIQ-REHKFLNAARANDLESLNSLAVIE 77 (444)
Q Consensus 5 ~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~----~~~~~~~~l~~~-~~~~~~~-~~~~~l~~~r~g~~~~l~~~~~~~ 77 (444)
..|+|.+||++|||+++.|..|+||.++|- ..+.++.|+... -..+..+ ....+++.+.-.+-..+..+...+
T Consensus 267 ~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~~~~~~~~~ik~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~c 345 (434)
T PHA02874 267 DIDIIDILLYHKADISIKDNKGENPIDTAFKYINKDPVIKDIIANAVLIKEADKLKDSDFLEHIEIKDNKEFSDFIKEC 345 (434)
T ss_pred cHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCccHHHHHHHHhcCchhhccccchhHHHHHHHHhccchHHHHHHHH
Confidence 679999999999999999999999999982 234556665322 1111111 113345555444444454444443
No 88
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=91.84 E-value=0.11 Score=59.53 Aligned_cols=74 Identities=22% Similarity=0.257 Sum_probs=50.9
Q ss_pred CCchHHHHHHHHhcCCcceeecCCCCCccccc--cCchHHHHHH-HHHHHhhhHHHHHHHHHHHhccchhhhcchhh
Q psy15737 2 SHTEKDIVCLLVSKNANINIVNGEGRTPRDVC--KHNDEARKLL-LAAEKTEGIQREHKFLNAARANDLESLNSLAV 75 (444)
Q Consensus 2 ~~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~--~~~~~~~~~l-~~~~~~~~~~~~~~~l~~~r~g~~~~l~~~~~ 75 (444)
++|..|+|.+||++|||++++|.+|+||.-.| ..+.+|-++| +.+..........-|..||+.|+++.+.-|+.
T Consensus 567 ~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~ 643 (823)
T PLN03192 567 SKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLK 643 (823)
T ss_pred HcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHH
Confidence 35788999999999999999999999997654 2335555554 22221222222345788999999988887765
No 89
>PHA02730 ankyrin-like protein; Provisional
Probab=91.43 E-value=0.15 Score=56.79 Aligned_cols=70 Identities=31% Similarity=0.295 Sum_probs=45.1
Q ss_pred chHHHHHHHHhcCCcceeecCCCCCccccc-c---CchHHHHHH-HHH-----HHhhhHHHHHHHHHHHh--ccchhhhc
Q psy15737 4 TEKDIVCLLVSKNANINIVNGEGRTPRDVC-K---HNDEARKLL-LAA-----EKTEGIQREHKFLNAAR--ANDLESLN 71 (444)
Q Consensus 4 ~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~-~---~~~~~~~~l-~~~-----~~~~~~~~~~~~l~~~r--~g~~~~l~ 71 (444)
|.+|+|.+||++|||++..|.+|.||.=+| . ...+|-++| ++. +..+..+.-- |..++. .|+++.+.
T Consensus 55 ~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d~~-l~~y~~s~n~~~~~vk 133 (672)
T PHA02730 55 TDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNINDFD-LYSYMSSDNIDLRLLK 133 (672)
T ss_pred CcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCCch-HHHHHHhcCCcHHHHH
Confidence 358999999999999999999999999864 1 136666665 442 2222223332 333443 56666554
Q ss_pred chh
Q psy15737 72 SLA 74 (444)
Q Consensus 72 ~~~ 74 (444)
-|+
T Consensus 134 ~Li 136 (672)
T PHA02730 134 YLI 136 (672)
T ss_pred HHH
Confidence 454
No 90
>KOG0505|consensus
Probab=91.40 E-value=0.21 Score=53.29 Aligned_cols=38 Identities=34% Similarity=0.486 Sum_probs=33.0
Q ss_pred chHHHHHHHHhcCCcceeecCCCCCccccccCchHHHHHH
Q psy15737 4 TEKDIVCLLVSKNANINIVNGEGRTPRDVCKHNDEARKLL 43 (444)
Q Consensus 4 ~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~~~~~~~~~l 43 (444)
|-++++.||+++||+++..+-.|+||.||| .++++ .+|
T Consensus 242 g~~~~~elL~~~ga~~d~~t~~g~~p~dv~-dee~~-~l~ 279 (527)
T KOG0505|consen 242 GQEDACELLVEHGADMDAKTKMGETPLDVA-DEEEL-YLL 279 (527)
T ss_pred hhHhHHHHHHHhhcccchhhhcCCCCccch-hhhhH-HHH
Confidence 567899999999999999999999999999 65666 543
No 91
>PHA02878 ankyrin repeat protein; Provisional
Probab=91.27 E-value=0.19 Score=53.37 Aligned_cols=73 Identities=14% Similarity=0.163 Sum_probs=52.1
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCccccccCc---hHHHHHHHHHHHhhhHHHHHHHHHHHhccchhhhcchhh
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVCKHN---DEARKLLLAAEKTEGIQREHKFLNAARANDLESLNSLAV 75 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~l~~~r~g~~~~l~~~~~ 75 (444)
.|..|+|.+||+.|||++..|..|+||.-+|-.. ..++.||+........-....|..|+..|+.+-+.-|+.
T Consensus 47 ~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~ei~~~Ll~ 122 (477)
T PHA02878 47 ARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRNVEIFKIILT 122 (477)
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCCHHHHHHHHh
Confidence 5789999999999999999999999999887222 244455544332222333456777888888877766654
No 92
>KOG0509|consensus
Probab=90.81 E-value=0.12 Score=56.01 Aligned_cols=29 Identities=24% Similarity=0.398 Sum_probs=25.8
Q ss_pred hHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 5 EKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 5 ~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
---+|++|||+|||++++|.+|-+|.-+|
T Consensus 124 ~~~vv~lLlqhGAdpt~~D~~G~~~lHla 152 (600)
T KOG0509|consen 124 HISVVDLLLQHGADPTLKDKQGLTPLHLA 152 (600)
T ss_pred cHHHHHHHHHcCCCCceecCCCCcHHHHH
Confidence 34689999999999999999999997776
No 93
>PHA02741 hypothetical protein; Provisional
Probab=90.54 E-value=0.27 Score=44.83 Aligned_cols=70 Identities=19% Similarity=0.223 Sum_probs=41.1
Q ss_pred HHHHHHHHhcCCcceeecC-CCCCccccc--cCchHHHHHHHHH-H-Hhhh--HHHHHHHHHHHhccchhhhcchhh
Q psy15737 6 KDIVCLLVSKNANINIVNG-EGRTPRDVC--KHNDEARKLLLAA-E-KTEG--IQREHKFLNAARANDLESLNSLAV 75 (444)
Q Consensus 6 ~~~v~~ll~~~a~~~~~~~-~g~~~~~~~--~~~~~~~~~l~~~-~-~~~~--~~~~~~~l~~~r~g~~~~l~~~~~ 75 (444)
.+++.+|+++|||++..|. +|+||.-+| ..+.++-++|... . .... ..-+.-|.-|+..|+.+-+.-|..
T Consensus 77 ~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~ 153 (169)
T PHA02741 77 AEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILRE 153 (169)
T ss_pred HHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 5788888888888888885 888887765 2334555554321 1 1111 122344666777777654444443
No 94
>PHA02795 ankyrin-like protein; Provisional
Probab=90.44 E-value=0.17 Score=53.76 Aligned_cols=64 Identities=17% Similarity=0.016 Sum_probs=40.8
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCcccccc--CchHHHHHHHHHHH-hh--hHHHHHHHHHHHhccc
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVCK--HNDEARKLLLAAEK-TE--GIQREHKFLNAARAND 66 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~--~~~~~~~~l~~~~~-~~--~~~~~~~~l~~~r~g~ 66 (444)
++.+|+|.+|+++|||++.+|.+|+||.-.|- ...++-++|-.... .. -..-..-|.-|+..|+
T Consensus 198 ~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~ 266 (437)
T PHA02795 198 PTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGS 266 (437)
T ss_pred cCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCC
Confidence 45689999999999999999999999987652 33555555422111 00 1112234667777775
No 95
>PHA03095 ankyrin-like protein; Provisional
Probab=90.32 E-value=0.15 Score=53.54 Aligned_cols=31 Identities=26% Similarity=0.398 Sum_probs=21.2
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
.|..++|.+||++|||++++|.+|+||..+|
T Consensus 267 ~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A 297 (471)
T PHA03095 267 FNNPRACRRLIALGADINAVSSDGNTPLSLM 297 (471)
T ss_pred cCCHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 3566677777777777777777777776665
No 96
>PHA02798 ankyrin-like protein; Provisional
Probab=90.24 E-value=0.14 Score=54.71 Aligned_cols=30 Identities=23% Similarity=0.275 Sum_probs=18.2
Q ss_pred chHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 4 TEKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 4 ~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
+..++|.+||++|||++++|..|+||..+|
T Consensus 269 ~~~~~v~~LL~~GAdin~~d~~G~TpL~~A 298 (489)
T PHA02798 269 NNRKIFEYLLQLGGDINIITELGNTCLFTA 298 (489)
T ss_pred CcHHHHHHHHHcCCcccccCCCCCcHHHHH
Confidence 455666666666666666666666665555
No 97
>PHA02876 ankyrin repeat protein; Provisional
Probab=88.93 E-value=0.29 Score=54.54 Aligned_cols=30 Identities=23% Similarity=0.155 Sum_probs=15.4
Q ss_pred chHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 4 TEKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 4 ~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
+..+||.+||++|||++..|..|+||.-+|
T Consensus 156 ~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~A 185 (682)
T PHA02876 156 DELLIAEMLLEGGADVNAKDIYCITPIHYA 185 (682)
T ss_pred CcHHHHHHHHhCCCCCCCCCCCCCCHHHHH
Confidence 344555555555555555555555555443
No 98
>PHA02875 ankyrin repeat protein; Provisional
Probab=88.60 E-value=0.27 Score=51.01 Aligned_cols=73 Identities=19% Similarity=0.207 Sum_probs=41.2
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCcccccc--CchHHHHHHHHHHHh---hhHHHHHHHHHHHhccchhhhcchhh
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVCK--HNDEARKLLLAAEKT---EGIQREHKFLNAARANDLESLNSLAV 75 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~--~~~~~~~~l~~~~~~---~~~~~~~~~l~~~r~g~~~~l~~~~~ 75 (444)
.|+.|+|.+||++|||+++.|.+|+||.-+|- .+.++-++|...... .-..-..-|.-|+..|+.+-+.-|+.
T Consensus 112 ~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~ 189 (413)
T PHA02875 112 LKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLD 189 (413)
T ss_pred hCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 46677888888888888888888888876652 223333333221110 00111234566777777766655554
No 99
>PHA02791 ankyrin-like protein; Provisional
Probab=88.45 E-value=0.41 Score=47.96 Aligned_cols=72 Identities=18% Similarity=0.077 Sum_probs=45.9
Q ss_pred CchHHHHHHHHhcCCcceeec-CCCCCcccccc--CchHHHHHHHHHHH-hhhHHH---HHHHHHHHhccchhhhcchhh
Q psy15737 3 HTEKDIVCLLVSKNANINIVN-GEGRTPRDVCK--HNDEARKLLLAAEK-TEGIQR---EHKFLNAARANDLESLNSLAV 75 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~-~~g~~~~~~~~--~~~~~~~~l~~~~~-~~~~~~---~~~~l~~~r~g~~~~l~~~~~ 75 (444)
.|..|+|.+||+++++. .| ..|+||.-.|- ...+|-++|..... ...+.. +--|..||+.|+++.+.-|+.
T Consensus 138 ~g~~eivk~LL~~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~ 215 (284)
T PHA02791 138 LNDVSIVSYFLSEIPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFK 215 (284)
T ss_pred cCCHHHHHHHHhcCCcc--cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHH
Confidence 46788999999887654 34 35889988772 23566566533321 111111 112778999999999988887
Q ss_pred H
Q psy15737 76 I 76 (444)
Q Consensus 76 ~ 76 (444)
.
T Consensus 216 ~ 216 (284)
T PHA02791 216 Y 216 (284)
T ss_pred C
Confidence 5
No 100
>PHA02875 ankyrin repeat protein; Provisional
Probab=88.33 E-value=0.37 Score=49.96 Aligned_cols=74 Identities=23% Similarity=0.257 Sum_probs=53.1
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCccccc--cCchHHHHHHHHHHH-hh--hHHHHHHHHHHHhccchhhhcchhhH
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVC--KHNDEARKLLLAAEK-TE--GIQREHKFLNAARANDLESLNSLAVI 76 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~--~~~~~~~~~l~~~~~-~~--~~~~~~~~l~~~r~g~~~~l~~~~~~ 76 (444)
.|..|+|++||++|||++..+.+|.||.-.| ..+.++-++|..... .. ....+.-|..|++.|+++.+..|+..
T Consensus 12 ~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~ 90 (413)
T PHA02875 12 FGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDL 90 (413)
T ss_pred hCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCHHHHHHHHHc
Confidence 4788999999999999999999999998765 234455555432211 11 11234568999999999998887763
No 101
>PHA02859 ankyrin repeat protein; Provisional
Probab=88.25 E-value=0.43 Score=45.24 Aligned_cols=30 Identities=7% Similarity=0.047 Sum_probs=26.9
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCcccc
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDV 32 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~ 32 (444)
.++.|+|.+|+++|||++++|.+|+||.-.
T Consensus 135 ~~~~~iv~~Li~~gadin~~d~~g~t~Lh~ 164 (209)
T PHA02859 135 NVRINVIKLLIDSGVSFLNKDFDNNNILYS 164 (209)
T ss_pred cCCHHHHHHHHHcCCCcccccCCCCcHHHH
Confidence 467899999999999999999999999864
No 102
>KOG0195|consensus
Probab=88.01 E-value=0.26 Score=49.21 Aligned_cols=32 Identities=41% Similarity=0.629 Sum_probs=29.3
Q ss_pred CCchHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 2 SHTEKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 2 ~~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
+||-.+||+-||++.||++.+|.-|+||.-.|
T Consensus 76 ahghrdivqkll~~kadvnavnehgntplhya 107 (448)
T KOG0195|consen 76 AHGHRDIVQKLLSRKADVNAVNEHGNTPLHYA 107 (448)
T ss_pred hcccHHHHHHHHHHhcccchhhccCCCchhhh
Confidence 68999999999999999999999999998765
No 103
>PHA02743 Viral ankyrin protein; Provisional
Probab=87.88 E-value=0.27 Score=44.88 Aligned_cols=65 Identities=25% Similarity=0.242 Sum_probs=37.9
Q ss_pred HHHHHHHhcCCcceeec-CCCCCccccc--cCchHHHHHH-HH--HHHh-hhHHHHHHHHHHHhccchhhhc
Q psy15737 7 DIVCLLVSKNANINIVN-GEGRTPRDVC--KHNDEARKLL-LA--AEKT-EGIQREHKFLNAARANDLESLN 71 (444)
Q Consensus 7 ~~v~~ll~~~a~~~~~~-~~g~~~~~~~--~~~~~~~~~l-~~--~~~~-~~~~~~~~~l~~~r~g~~~~l~ 71 (444)
++|.+|+++||+++..| ..|+||.-+| ....++-++| +. +... .-..-+.-|--|++.|+..-+.
T Consensus 74 ~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~ 145 (166)
T PHA02743 74 MKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMME 145 (166)
T ss_pred HHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHH
Confidence 34789999999999988 5899996532 3455555554 21 1111 1112233466666667665333
No 104
>KOG0507|consensus
Probab=87.57 E-value=0.27 Score=54.65 Aligned_cols=32 Identities=31% Similarity=0.364 Sum_probs=30.5
Q ss_pred CCchHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 2 SHTEKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 2 ~~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
.||-.|+|.+||++|||+-|+|..++||.|+|
T Consensus 124 qhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA 155 (854)
T KOG0507|consen 124 QHGHLEVVFYLLKKNADPFIRNNSKETVLDLA 155 (854)
T ss_pred hhcchHHHHHHHhcCCCccccCcccccHHHHH
Confidence 37888999999999999999999999999999
No 105
>PHA02989 ankyrin repeat protein; Provisional
Probab=87.45 E-value=0.3 Score=52.30 Aligned_cols=29 Identities=17% Similarity=0.174 Sum_probs=15.7
Q ss_pred hHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 5 EKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 5 ~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
..|+|.+||++|||++++|.+|+||...|
T Consensus 268 ~~~~v~~LL~~Gadin~~d~~G~TpL~~A 296 (494)
T PHA02989 268 NYEAFNYLLKLGDDIYNVSKDGDTVLTYA 296 (494)
T ss_pred CHHHHHHHHHcCCCccccCCCCCCHHHHH
Confidence 34555555555555555555555555544
No 106
>PHA03100 ankyrin repeat protein; Provisional
Probab=87.30 E-value=0.32 Score=51.31 Aligned_cols=38 Identities=34% Similarity=0.350 Sum_probs=21.1
Q ss_pred HHHHHHHHhcCCcceeecCCCCCccccc--cCchHHHHHH
Q psy15737 6 KDIVCLLVSKNANINIVNGEGRTPRDVC--KHNDEARKLL 43 (444)
Q Consensus 6 ~~~v~~ll~~~a~~~~~~~~g~~~~~~~--~~~~~~~~~l 43 (444)
.++|.+||++|||+++.|..|+||...| ..+.++-++|
T Consensus 230 ~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~L 269 (480)
T PHA03100 230 LEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYL 269 (480)
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 5666666666666666666666665432 2344444443
No 107
>PHA02878 ankyrin repeat protein; Provisional
Probab=87.11 E-value=0.32 Score=51.67 Aligned_cols=30 Identities=27% Similarity=0.278 Sum_probs=25.1
Q ss_pred chHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 4 TEKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 4 ~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
+..++|.+||++|||++++|.+|+||..+|
T Consensus 278 ~~~~~v~~Ll~~gadin~~d~~g~TpL~~A 307 (477)
T PHA02878 278 KSERKLKLLLEYGADINSLNSYKLTPLSSA 307 (477)
T ss_pred cCHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 346788888888888888888888888877
No 108
>PHA02946 ankyin-like protein; Provisional
Probab=86.83 E-value=0.36 Score=51.30 Aligned_cols=73 Identities=16% Similarity=0.120 Sum_probs=44.3
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCcccccc--Cc--hHHHHHHHHHHHhh---hHHHHHHHHHHHhccchhhhcchhh
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVCK--HN--DEARKLLLAAEKTE---GIQREHKFLNAARANDLESLNSLAV 75 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~--~~--~~~~~~l~~~~~~~---~~~~~~~~l~~~r~g~~~~l~~~~~ 75 (444)
.|..|+|.+||++|||++..|.+|+||.-.|- .+ .++-++|......- .-+.-...|.||..|..+.+.-|+.
T Consensus 82 ~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~aa~~~~~~vv~~Ll~ 161 (446)
T PHA02946 82 INNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLLACTDPSERVFKKIMS 161 (446)
T ss_pred cCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHHHHHCCChHHHHHHHh
Confidence 57789999999999999999999999987641 11 33344442211110 0111122445777777665555543
No 109
>KOG4412|consensus
Probab=86.63 E-value=0.48 Score=44.54 Aligned_cols=69 Identities=19% Similarity=0.227 Sum_probs=47.1
Q ss_pred CCchHHHHHHHHhc-CCcceeecCCCCCccccccCc---hHHHHHH-HHHHHhhhHHH--HHHHHHHHhccchhhhc
Q psy15737 2 SHTEKDIVCLLVSK-NANINIVNGEGRTPRDVCKHN---DEARKLL-LAAEKTEGIQR--EHKFLNAARANDLESLN 71 (444)
Q Consensus 2 ~~~~~~~v~~ll~~-~a~~~~~~~~g~~~~~~~~~~---~~~~~~l-~~~~~~~~~~~--~~~~l~~~r~g~~~~l~ 71 (444)
|.|+-|||.-||-. |||++++|.-||||.-.| -. =+|-+|| +..+.-..+.+ ..-|=.||.-|++.-+.
T Consensus 81 s~g~~evVk~Ll~r~~advna~tn~G~T~LHyA-agK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie 156 (226)
T KOG4412|consen 81 SNGNDEVVKELLNRSGADVNATTNGGQTCLHYA-AGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIE 156 (226)
T ss_pred hcCcHHHHHHHhcCCCCCcceecCCCcceehhh-hcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHH
Confidence 67899999999988 999999999999999988 33 3666664 43322222211 12345566666665443
No 110
>PHA02989 ankyrin repeat protein; Provisional
Probab=86.22 E-value=0.43 Score=51.02 Aligned_cols=30 Identities=33% Similarity=0.357 Sum_probs=26.4
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCcccc
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDV 32 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~ 32 (444)
.+.+|+|.+||++|||+++.|.+|.||.-.
T Consensus 85 ~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~ 114 (494)
T PHA02989 85 NKIKKIVKLLLKFGADINLKTFNGVSPIVC 114 (494)
T ss_pred hhHHHHHHHHHHCCCCCCCCCCCCCcHHHH
Confidence 456899999999999999999999999753
No 111
>PHA02884 ankyrin repeat protein; Provisional
Probab=86.15 E-value=0.4 Score=48.49 Aligned_cols=41 Identities=20% Similarity=0.190 Sum_probs=29.5
Q ss_pred CchHHHHHHHHhcCCcceeec-CCCCCccccc--cCchHHHHHH
Q psy15737 3 HTEKDIVCLLVSKNANINIVN-GEGRTPRDVC--KHNDEARKLL 43 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~-~~g~~~~~~~--~~~~~~~~~l 43 (444)
.+..|+|.+||++|||++..+ ..|+||.-+| ....++-++|
T Consensus 80 ~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklL 123 (300)
T PHA02884 80 CDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEIL 123 (300)
T ss_pred cCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 366788888888888888764 5788887654 4566666665
No 112
>PHA02730 ankyrin-like protein; Provisional
Probab=85.85 E-value=0.63 Score=51.93 Aligned_cols=30 Identities=23% Similarity=0.347 Sum_probs=27.6
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCcccc
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDV 32 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~ 32 (444)
...+|||.+||++|||++..|..|+||.-.
T Consensus 212 ~n~~eiv~lLIs~GadIN~kd~~G~TpLh~ 241 (672)
T PHA02730 212 SLSKDVIKCLIDNNVSIHGRDEGGSLPIQY 241 (672)
T ss_pred ccCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 457999999999999999999999999973
No 113
>PHA02798 ankyrin-like protein; Provisional
Probab=84.96 E-value=0.59 Score=49.92 Aligned_cols=30 Identities=33% Similarity=0.389 Sum_probs=26.7
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCcccc
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDV 32 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~ 32 (444)
+++.|+|.+||++|||++..|++|+||.-.
T Consensus 48 ~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~ 77 (489)
T PHA02798 48 SPSTDIVKLFINLGANVNGLDNEYSTPLCT 77 (489)
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCChHHH
Confidence 457899999999999999999999999754
No 114
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=84.78 E-value=1.2 Score=50.67 Aligned_cols=28 Identities=36% Similarity=0.369 Sum_probs=26.1
Q ss_pred HHHHHHHhcCCcceeecCCCCCcccccc
Q psy15737 7 DIVCLLVSKNANINIVNGEGRTPRDVCK 34 (444)
Q Consensus 7 ~~v~~ll~~~a~~~~~~~~g~~~~~~~~ 34 (444)
|+|.+||++|||++++|.+|+||..+|-
T Consensus 516 e~~k~LL~~GADIN~~d~~G~TPLh~A~ 543 (764)
T PHA02716 516 DSFVYLLSIQYNINIPTKNGVTPLMLTM 543 (764)
T ss_pred HHHHHHHhCCCCCcccCCCCCCHHHHHH
Confidence 6679999999999999999999999984
No 115
>PHA02884 ankyrin repeat protein; Provisional
Probab=84.33 E-value=0.67 Score=46.87 Aligned_cols=74 Identities=18% Similarity=0.136 Sum_probs=50.7
Q ss_pred CchHHHHHHHHhcCCcceeec----CCCCCcccccc--CchHHHHHHHHHH-HhhhH---HHHHHHHHHHhccchhhhcc
Q psy15737 3 HTEKDIVCLLVSKNANINIVN----GEGRTPRDVCK--HNDEARKLLLAAE-KTEGI---QREHKFLNAARANDLESLNS 72 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~----~~g~~~~~~~~--~~~~~~~~l~~~~-~~~~~---~~~~~~l~~~r~g~~~~l~~ 72 (444)
.+-.|+|.+||++|||+++.| .+|+||.-+|- .+.++-++|-... ....+ ....-|.-||+.|..+.+.-
T Consensus 43 ~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivkl 122 (300)
T PHA02884 43 FHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEI 122 (300)
T ss_pred cCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHH
Confidence 466899999999999999974 58999999872 2355555553221 11111 12345778888999888777
Q ss_pred hhhH
Q psy15737 73 LAVI 76 (444)
Q Consensus 73 ~~~~ 76 (444)
|+..
T Consensus 123 LL~~ 126 (300)
T PHA02884 123 LLSY 126 (300)
T ss_pred HHHC
Confidence 7654
No 116
>KOG0818|consensus
Probab=82.59 E-value=0.57 Score=49.80 Aligned_cols=30 Identities=23% Similarity=0.202 Sum_probs=26.4
Q ss_pred HHHHHHHhcCCcceeecCCCCCccccccCch
Q psy15737 7 DIVCLLVSKNANINIVNGEGRTPRDVCKHND 37 (444)
Q Consensus 7 ~~v~~ll~~~a~~~~~~~~g~~~~~~~~~~~ 37 (444)
--+.||+=||||+..-|++|+||.|+| .+.
T Consensus 181 ~Q~ElL~vYGAD~~a~d~~GmtP~~~A-R~~ 210 (669)
T KOG0818|consen 181 LQAELLAVYGADPGAQDSSGMTPVDYA-RQG 210 (669)
T ss_pred hhhhHHhhccCCCCCCCCCCCcHHHHH-Hhc
Confidence 347899999999999999999999999 443
No 117
>PHA02917 ankyrin-like protein; Provisional
Probab=82.53 E-value=0.96 Score=50.63 Aligned_cols=72 Identities=15% Similarity=0.075 Sum_probs=44.6
Q ss_pred chHHHHHHHHhcCCcceeecCCCCCccccccCc------hHHHHHH-HHHHHhhhHHHHHHHHHHHhccchhhhcchhh
Q psy15737 4 TEKDIVCLLVSKNANINIVNGEGRTPRDVCKHN------DEARKLL-LAAEKTEGIQREHKFLNAARANDLESLNSLAV 75 (444)
Q Consensus 4 ~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~~~------~~~~~~l-~~~~~~~~~~~~~~~l~~~r~g~~~~l~~~~~ 75 (444)
|..|+|++||++|||+...|.+|+||.-.|-.. .++..+| ++.........--.+..|+..|+++.+.-|+.
T Consensus 46 ~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~~~~~~~a~~~~~~e~vk~Ll~ 124 (661)
T PHA02917 46 NNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDFNIFSYMKSKNVDVDLIKVLVE 124 (661)
T ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCcchHHHHHhhcCCHHHHHHHHH
Confidence 789999999999999999999999998866221 1222333 32110111111122335666777776666653
No 118
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=82.13 E-value=0.73 Score=51.54 Aligned_cols=31 Identities=19% Similarity=0.453 Sum_probs=22.8
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
.|+.++|.+||++|||+++.|.+|+||..+|
T Consensus 125 ~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A 155 (664)
T PTZ00322 125 NGHVQVVRVLLEFGADPTLLDKDGKTPLELA 155 (664)
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 4667777777777777777777777777665
No 119
>KOG0195|consensus
Probab=82.12 E-value=1.7 Score=43.51 Aligned_cols=44 Identities=36% Similarity=0.322 Sum_probs=33.8
Q ss_pred chHHHHHHHHhcCCcceeecCCCCCccccccCchHHHHHHHHHHH
Q psy15737 4 TEKDIVCLLVSKNANINIVNGEGRTPRDVCKHNDEARKLLLAAEK 48 (444)
Q Consensus 4 ~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~ 48 (444)
|-.-|..=|+..||-++|-|..|.||.|+| ....-.+++|-||+
T Consensus 111 gydqiaedli~~ga~v~icnk~g~tpldka-kp~l~~~l~e~aek 154 (448)
T KOG0195|consen 111 GYDQIAEDLISCGAAVNICNKKGMTPLDKA-KPMLKNTLLEIAEK 154 (448)
T ss_pred cHHHHHHHHHhccceeeecccCCCCchhhh-chHHHHHHHHHHHH
Confidence 456688889999999999999999999999 43333344555554
No 120
>PHA02736 Viral ankyrin protein; Provisional
Probab=81.36 E-value=0.89 Score=40.43 Aligned_cols=69 Identities=20% Similarity=0.186 Sum_probs=41.3
Q ss_pred HHHHHHHHhcCCcceeec-CCCCCccccc---cCchHHHHHHH--HHHHh-hhHHHHHHHHHHHhccchhhhcchh
Q psy15737 6 KDIVCLLVSKNANINIVN-GEGRTPRDVC---KHNDEARKLLL--AAEKT-EGIQREHKFLNAARANDLESLNSLA 74 (444)
Q Consensus 6 ~~~v~~ll~~~a~~~~~~-~~g~~~~~~~---~~~~~~~~~l~--~~~~~-~~~~~~~~~l~~~r~g~~~~l~~~~ 74 (444)
.|+|.+|+++|||++..| .+|+||.-+| ..-+-++.||. .+... .-..-+.-|.-|+..|...-+.-|+
T Consensus 71 ~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll 146 (154)
T PHA02736 71 QEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILR 146 (154)
T ss_pred HHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHH
Confidence 367899999999999988 4899987533 44444444553 12221 1122334466677777665554443
No 121
>PHA02874 ankyrin repeat protein; Provisional
Probab=81.15 E-value=1 Score=47.28 Aligned_cols=74 Identities=22% Similarity=0.236 Sum_probs=46.2
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCccccccC--chHHHHHHHHHHH---hhhHHHHHHHHHHHhccchhhhcchhhH
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVCKH--NDEARKLLLAAEK---TEGIQREHKFLNAARANDLESLNSLAVI 76 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~~--~~~~~~~l~~~~~---~~~~~~~~~~l~~~r~g~~~~l~~~~~~ 76 (444)
.|..|+|.+||++|||+++.|.+|+||..+|-. +.++-++|..... ..-..-..-|.-|++.|+.+-+.-|+..
T Consensus 134 ~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~ 212 (434)
T PHA02874 134 KGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDH 212 (434)
T ss_pred CCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 467788888888888888888888888877621 2344444422111 0111123346677888887777666653
No 122
>PHA02795 ankyrin-like protein; Provisional
Probab=80.56 E-value=0.95 Score=48.13 Aligned_cols=73 Identities=12% Similarity=-0.073 Sum_probs=39.9
Q ss_pred CchHHHHHHHHhcCCcceeec------CCCCCccc--cccCchHHHHHHHHHH-HhhhH--HHHHHHHHHHhccchhhhc
Q psy15737 3 HTEKDIVCLLVSKNANINIVN------GEGRTPRD--VCKHNDEARKLLLAAE-KTEGI--QREHKFLNAARANDLESLN 71 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~------~~g~~~~~--~~~~~~~~~~~l~~~~-~~~~~--~~~~~~l~~~r~g~~~~l~ 71 (444)
.+++|+|.+||++||+..-.. -.|.||.- -.....+|-++|-... .-..+ .-..-|.-||+.|+.+.+.
T Consensus 159 ~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVe 238 (437)
T PHA02795 159 KKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVS 238 (437)
T ss_pred cCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHH
Confidence 467888888888888532121 23555421 1124556666653222 11111 1223577788888888777
Q ss_pred chhh
Q psy15737 72 SLAV 75 (444)
Q Consensus 72 ~~~~ 75 (444)
-|+.
T Consensus 239 lLL~ 242 (437)
T PHA02795 239 WLLE 242 (437)
T ss_pred HHHH
Confidence 6665
No 123
>PHA02917 ankyrin-like protein; Provisional
Probab=80.41 E-value=0.93 Score=50.74 Aligned_cols=30 Identities=10% Similarity=0.102 Sum_probs=28.3
Q ss_pred chHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 4 TEKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 4 ~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
+..|+|.+||++|||++..|.+|+||.-.|
T Consensus 207 ~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A 236 (661)
T PHA02917 207 VRPEVVKCLINHGIKPSSIDKNYCTALQYY 236 (661)
T ss_pred CcHHHHHHHHHCCCCcccCCCCCCcHHHHH
Confidence 468999999999999999999999999987
No 124
>PHA03100 ankyrin repeat protein; Provisional
Probab=80.32 E-value=1.2 Score=46.86 Aligned_cols=30 Identities=37% Similarity=0.428 Sum_probs=17.5
Q ss_pred chHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 4 TEKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 4 ~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
+..|+|.+||++||+++..|..|+||.-+|
T Consensus 84 ~~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A 113 (480)
T PHA03100 84 DVKEIVKLLLEYGANVNAPDNNGITPLLYA 113 (480)
T ss_pred chHHHHHHHHHCCCCCCCCCCCCCchhhHH
Confidence 445566666666666666666666665554
No 125
>PHA02876 ankyrin repeat protein; Provisional
Probab=79.55 E-value=0.96 Score=50.39 Aligned_cols=41 Identities=24% Similarity=0.231 Sum_probs=31.6
Q ss_pred chHHHHHHHHhcCCcceeecCCCCCccccccC---chHHHHHHH
Q psy15737 4 TEKDIVCLLVSKNANINIVNGEGRTPRDVCKH---NDEARKLLL 44 (444)
Q Consensus 4 ~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~~---~~~~~~~l~ 44 (444)
+..++|.+||++|||+++.|.+|+||..+|-. +.+|-++|.
T Consensus 420 ~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl 463 (682)
T PHA02876 420 NPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLL 463 (682)
T ss_pred CHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHH
Confidence 34678899999999999999999999988721 346666653
No 126
>PHA02736 Viral ankyrin protein; Provisional
Probab=79.53 E-value=1.1 Score=39.86 Aligned_cols=27 Identities=26% Similarity=0.358 Sum_probs=16.2
Q ss_pred HHHHHHHh-cCCcceeecCCCCCccccc
Q psy15737 7 DIVCLLVS-KNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 7 ~~v~~ll~-~~a~~~~~~~~g~~~~~~~ 33 (444)
++|.+||+ .|||+++.|..|+||..+|
T Consensus 106 ~i~~~Ll~~~g~d~n~~~~~g~tpL~~A 133 (154)
T PHA02736 106 ELATWLCNQPGVNMEILNYAFKTPYYVA 133 (154)
T ss_pred HHHHHHHhCCCCCCccccCCCCCHHHHH
Confidence 45556664 3666666666666666555
No 127
>PHA02946 ankyin-like protein; Provisional
Probab=79.50 E-value=1.1 Score=47.66 Aligned_cols=26 Identities=15% Similarity=0.172 Sum_probs=12.8
Q ss_pred hHHHHHHHHhcCCcceeecCCCCCcc
Q psy15737 5 EKDIVCLLVSKNANINIVNGEGRTPR 30 (444)
Q Consensus 5 ~~~~v~~ll~~~a~~~~~~~~g~~~~ 30 (444)
.+++|.+||++|||+++.|..|+||.
T Consensus 152 ~~~vv~~Ll~~gad~~~~d~~G~t~L 177 (446)
T PHA02946 152 SERVFKKIMSIGFEARIVDKFGKNHI 177 (446)
T ss_pred ChHHHHHHHhccccccccCCCCCCHH
Confidence 34455555555555555555555543
No 128
>PHA03095 ankyrin-like protein; Provisional
Probab=79.26 E-value=1.1 Score=46.93 Aligned_cols=27 Identities=26% Similarity=0.356 Sum_probs=17.1
Q ss_pred chHHHHHHHHhcCCcceeecCCCCCcc
Q psy15737 4 TEKDIVCLLVSKNANINIVNGEGRTPR 30 (444)
Q Consensus 4 ~~~~~v~~ll~~~a~~~~~~~~g~~~~ 30 (444)
+.-|+|.+||++|||++..|..|+||.
T Consensus 25 ~~~~~v~~Ll~~ga~vn~~~~~g~t~L 51 (471)
T PHA03095 25 VTVEEVRRLLAAGADVNFRGEYGKTPL 51 (471)
T ss_pred CCHHHHHHHHHcCCCcccCCCCCCCHH
Confidence 345666666666666666666666664
No 129
>PHA02792 ankyrin-like protein; Provisional
Probab=78.99 E-value=1.1 Score=49.65 Aligned_cols=30 Identities=30% Similarity=0.459 Sum_probs=19.1
Q ss_pred chHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 4 TEKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 4 ~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
+.+|+|.+||++|||++++|..|+||..+|
T Consensus 421 ~n~eivelLLs~GADIN~kD~~G~TpL~~A 450 (631)
T PHA02792 421 HSVSLVEWLIDNGADINITTKYGSTCIGIC 450 (631)
T ss_pred CCHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 455666666666666666666666666655
No 130
>KOG0508|consensus
Probab=76.95 E-value=1.6 Score=46.42 Aligned_cols=72 Identities=19% Similarity=0.218 Sum_probs=46.5
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCccccc--cCchHHHHHHHHHHHhhhHH----HHHHHHHHHhccchhhhcchhh
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVC--KHNDEARKLLLAAEKTEGIQ----REHKFLNAARANDLESLNSLAV 75 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~--~~~~~~~~~l~~~~~~~~~~----~~~~~l~~~r~g~~~~l~~~~~ 75 (444)
.|+-|||..|+++|||+.|.|.-|.|+.=++ +...+|.+.|..-. ++.-+ =-.-|=.||-.|.++.+.-|+.
T Consensus 127 DG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~g-ADvn~ks~kGNTALH~caEsG~vdivq~Ll~ 204 (615)
T KOG0508|consen 127 DGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQG-ADVNAKSYKGNTALHDCAESGSVDIVQLLLK 204 (615)
T ss_pred cchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhC-CCcchhcccCchHHHhhhhcccHHHHHHHHh
Confidence 4788999999999999999999999998775 34467777652211 11111 1123555666666666655544
No 131
>PHA02741 hypothetical protein; Provisional
Probab=76.81 E-value=1.5 Score=39.96 Aligned_cols=18 Identities=17% Similarity=0.242 Sum_probs=9.5
Q ss_pred hcCCcceeecCCCCCccc
Q psy15737 14 SKNANINIVNGEGRTPRD 31 (444)
Q Consensus 14 ~~~a~~~~~~~~g~~~~~ 31 (444)
.+||+++.+|..|+||.-
T Consensus 48 ~~ga~in~~d~~g~T~Lh 65 (169)
T PHA02741 48 CHAAALNATDDAGQMCIH 65 (169)
T ss_pred hhhhhhhccCCCCCcHHH
Confidence 345555555555555543
No 132
>KOG0508|consensus
Probab=76.36 E-value=2.4 Score=45.13 Aligned_cols=40 Identities=25% Similarity=0.359 Sum_probs=26.3
Q ss_pred chHHHHHHHHhcCCcceeecCCCCCccccccC--chHHHHHH
Q psy15737 4 TEKDIVCLLVSKNANINIVNGEGRTPRDVCKH--NDEARKLL 43 (444)
Q Consensus 4 ~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~~--~~~~~~~l 43 (444)
|-.|||++||+.|||++...--|+|+.-.|-+ .-+|-++|
T Consensus 161 Gh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~L 202 (615)
T KOG0508|consen 161 GHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLL 202 (615)
T ss_pred CchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHH
Confidence 55677777777777777777777777666521 23444443
No 133
>PHA02792 ankyrin-like protein; Provisional
Probab=76.34 E-value=2.6 Score=46.85 Aligned_cols=41 Identities=24% Similarity=0.302 Sum_probs=33.7
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCccccc---cCchHHHHHH
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVC---KHNDEARKLL 43 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~---~~~~~~~~~l 43 (444)
.|..|+|.+|+++|||++..|.+|.||.-.| +...||-++|
T Consensus 82 n~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~L 125 (631)
T PHA02792 82 NIDIELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLL 125 (631)
T ss_pred cccHHHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHH
Confidence 4778999999999999999999999995554 3457777765
No 134
>KOG3676|consensus
Probab=74.72 E-value=1.8 Score=48.59 Aligned_cols=73 Identities=19% Similarity=0.152 Sum_probs=52.6
Q ss_pred chHHHHHHHHhcCCcceeecCCCCCccccccCchHHHHHHHHHHHhhhHHHHH--------HHHHHHhccchhhhcchhh
Q psy15737 4 TEKDIVCLLVSKNANINIVNGEGRTPRDVCKHNDEARKLLLAAEKTEGIQREH--------KFLNAARANDLESLNSLAV 75 (444)
Q Consensus 4 ~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--------~~l~~~r~g~~~~l~~~~~ 75 (444)
+-+|||.|||++|||++..|..|+|-.-.+ -=-+..+|...+-+.-..++|+ =|-=||+.|+++-.-.++.
T Consensus 251 nq~eivrlLl~~gAd~~aqDS~GNTVLH~l-Vi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile 329 (782)
T KOG3676|consen 251 NQPEIVRLLLAHGADPNAQDSNGNTVLHML-VIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILE 329 (782)
T ss_pred CCHHHHHHHHhcCCCCCccccCCChHHHHH-HHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHH
Confidence 357999999999999999999999988766 2235667754444333333332 2444899999998877777
Q ss_pred Hh
Q psy15737 76 IE 77 (444)
Q Consensus 76 ~~ 77 (444)
+|
T Consensus 330 ~~ 331 (782)
T KOG3676|consen 330 RR 331 (782)
T ss_pred hh
Confidence 74
No 135
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=74.41 E-value=2.8 Score=37.81 Aligned_cols=30 Identities=23% Similarity=0.335 Sum_probs=18.9
Q ss_pred chHHHHHHHHhcCC---cceeecCCCCCccccc
Q psy15737 4 TEKDIVCLLVSKNA---NINIVNGEGRTPRDVC 33 (444)
Q Consensus 4 ~~~~~v~~ll~~~a---~~~~~~~~g~~~~~~~ 33 (444)
+..++|++||+.|| +.+.+|..|+||...|
T Consensus 122 ~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A 154 (235)
T COG0666 122 GNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWA 154 (235)
T ss_pred chHHHHHHHHHcCCCCCCccccCCCCCchhHHH
Confidence 45566666666666 4555566666666655
No 136
>KOG0522|consensus
Probab=74.38 E-value=5.1 Score=43.20 Aligned_cols=40 Identities=25% Similarity=0.350 Sum_probs=32.1
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCccc--cccCchHHHHH
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRD--VCKHNDEARKL 42 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~--~~~~~~~~~~~ 42 (444)
-|..+.+.+||..|||+++.|.+|.+|.- |+..|++|..-
T Consensus 65 Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~ 106 (560)
T KOG0522|consen 65 LGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITE 106 (560)
T ss_pred hcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHH
Confidence 46788999999999999999999999964 55566654443
No 137
>KOG4177|consensus
Probab=73.58 E-value=1.8 Score=50.88 Aligned_cols=32 Identities=28% Similarity=0.454 Sum_probs=26.4
Q ss_pred CCchHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 2 SHTEKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 2 ~~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
++|..||+.||+++||+++..|-+|.||.-.+
T Consensus 582 ~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA 613 (1143)
T KOG4177|consen 582 QQGHNDIAELLLKHGASVNAADLDGFTPLHIA 613 (1143)
T ss_pred HcChHHHHHHHHHcCCCCCcccccCcchhHHH
Confidence 46788888888888888888888888887655
No 138
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=73.36 E-value=1.8 Score=49.55 Aligned_cols=31 Identities=16% Similarity=0.247 Sum_probs=28.9
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
.|+.++|.+||++|||++..|.+|+||..+|
T Consensus 632 ~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A 662 (823)
T PLN03192 632 RNDLTAMKELLKQGLNVDSEDHQGATALQVA 662 (823)
T ss_pred hCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 5788999999999999999999999999887
No 139
>KOG0515|consensus
Probab=73.01 E-value=2.2 Score=45.87 Aligned_cols=31 Identities=29% Similarity=0.448 Sum_probs=27.8
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
.|--|||..|+++|||++..|.+|.||.--|
T Consensus 593 aghyeIVkFLi~~ganVNa~DSdGWTPLHCA 623 (752)
T KOG0515|consen 593 AGHYEIVKFLIEFGANVNAADSDGWTPLHCA 623 (752)
T ss_pred cchhHHHHHHHhcCCcccCccCCCCchhhhh
Confidence 3567999999999999999999999998765
No 140
>KOG0514|consensus
Probab=72.91 E-value=3 Score=43.16 Aligned_cols=44 Identities=27% Similarity=0.431 Sum_probs=35.9
Q ss_pred CCchHHHHHHHHhc-CCcceeecCCCCCccccccCc---hHHHHHHHHH
Q psy15737 2 SHTEKDIVCLLVSK-NANINIVNGEGRTPRDVCKHN---DEARKLLLAA 46 (444)
Q Consensus 2 ~~~~~~~v~~ll~~-~a~~~~~~~~g~~~~~~~~~~---~~~~~~l~~~ 46 (444)
.||+||||.|||.. +.|+.+-|-||-|+.-|| -+ .||-.||=+.
T Consensus 382 EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IA-leagh~eIa~mlYa~ 429 (452)
T KOG0514|consen 382 EHGHKEIVKLLLAVPSCDISLTDVDGSTALSIA-LEAGHREIAVMLYAH 429 (452)
T ss_pred hhChHHHHHHHhccCcccceeecCCCchhhhhH-HhcCchHHHHHHHHH
Confidence 49999999999865 678999999999999988 43 6777776554
No 141
>KOG1710|consensus
Probab=71.90 E-value=1.5 Score=43.92 Aligned_cols=126 Identities=15% Similarity=0.198 Sum_probs=68.2
Q ss_pred CchHHHHHHHHhcCCccee-ecCCCCCccccc---cCchHHHHHHHHHHHhhhHHHHHHHHHHHhccchhhhcchhhHhh
Q psy15737 3 HTEKDIVCLLVSKNANINI-VNGEGRTPRDVC---KHNDEARKLLLAAEKTEGIQREHKFLNAARANDLESLNSLAVIEK 78 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~-~~~~g~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~l~~~r~g~~~~l~~~~~~~e 78 (444)
.|.-+.|+|||++|||++- .+|.+-||.=.| .. .+|.++|..|...-. +.+.. |+++.=+..++-.+
T Consensus 55 kGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn-~dvcrllldaGa~~~------~vNsv--grTAaqmAAFVG~H 125 (396)
T KOG1710|consen 55 KGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGN-QDVCRLLLDAGARMY------LVNSV--GRTAAQMAAFVGHH 125 (396)
T ss_pred cCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCC-chHHHHHHhccCccc------cccch--hhhHHHHHHHhcch
Confidence 3667888888888888875 356677775321 21 345555433332211 22222 44444444444457
Q ss_pred hhhhhhhcccccccccccccccccCCcEEEEEEcCCH-HHHHHHHHHHHhcCCCCCeEEEEEcCccHH
Q psy15737 79 GVLEFFKNKSDARLGLKRKEFKYLDGAKVLTSHISPA-AFNLYFSDVVEKWGGSTSNIDIMVKADKVA 145 (444)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~Y~~g~kV~rv~~~~~-~q~~~L~~l~~~W~~~~~~vdV~V~p~~~~ 145 (444)
.|-+++-++ .......||..-|+|.=.|.-+ +-..+++.+... .+-.||.|...-+..+
T Consensus 126 ~CV~iINN~------~t~~~leyyt~p~g~~~ep~~Pp~La~~~H~~~t~--~nlHPVkIi~~v~~~p 185 (396)
T KOG1710|consen 126 ECVAIINNH------ITIDVLEYYTRPKGYEGEPEYPPELAVFIHSLCTS--HNLHPVKIIFRVSKYP 185 (396)
T ss_pred HHHHHHhcc------ccHHHHHHhccccccCCCCCCCHHHHHHHHHHHhc--ccccceEEEEEcccCc
Confidence 777788777 2334455666666666666643 344566666432 2235666655444444
No 142
>KOG4177|consensus
Probab=71.68 E-value=3.5 Score=48.61 Aligned_cols=68 Identities=22% Similarity=0.194 Sum_probs=51.2
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCccccccCchHHHHHHHHHHHhhhHHHHHHHHHHHhccchhhhcchhhH
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVCKHNDEARKLLLAAEKTEGIQREHKFLNAARANDLESLNSLAVI 76 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~r~g~~~~l~~~~~~ 76 (444)
.|+.+++.+||+++|+++|.|.+|.||.+.+.....++-+++ . ++.+-..+..+|.+..+.+.+|+.-
T Consensus 130 ~g~~~~~~~ll~~~a~~~~k~~~g~t~l~~a~~~~~~~ll~~-~-----~~~d~l~~~~~~~~~~~~~~~ll~~ 197 (1143)
T KOG4177|consen 130 KGHVQVIELLLQHGAPINIKTKNGLSPLHMAAQVACARLLLE-Y-----KAPDYLRLHVAAHCGHARVAKLLLD 197 (1143)
T ss_pred cccHHHHHHHHHccCCCcccccCCCCchhhhcchhhhHHhhh-c-----ccchhhhhhHHhhcchHHHHhhhhc
Confidence 478999999999999999999999999999955333222222 2 2233225689999999999988764
No 143
>PHA02743 Viral ankyrin protein; Provisional
Probab=70.85 E-value=2.4 Score=38.57 Aligned_cols=26 Identities=8% Similarity=0.166 Sum_probs=22.0
Q ss_pred HHHHHHHHhcCCcceeecCCCCCccc
Q psy15737 6 KDIVCLLVSKNANINIVNGEGRTPRD 31 (444)
Q Consensus 6 ~~~v~~ll~~~a~~~~~~~~g~~~~~ 31 (444)
++++.+|+++|++++..|..|+||.-
T Consensus 37 ~~~~~~l~~~g~~~~~~d~~g~t~Lh 62 (166)
T PHA02743 37 MEVAPFISGDGHLLHRYDHHGRQCTH 62 (166)
T ss_pred HHHHHHHhhcchhhhccCCCCCcHHH
Confidence 36777889999999999999999854
No 144
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=68.62 E-value=4.2 Score=45.90 Aligned_cols=30 Identities=27% Similarity=0.271 Sum_probs=28.2
Q ss_pred chHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 4 TEKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 4 ~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
|..++|.+|+++|||++..|..|+||..+|
T Consensus 186 ~~~~iv~lLl~~gadin~~d~~g~T~Lh~A 215 (743)
T TIGR00870 186 GSPSIVALLSEDPADILTADSLGNTLLHLL 215 (743)
T ss_pred CCHHHHHHHhcCCcchhhHhhhhhHHHHHH
Confidence 568999999999999999999999999887
No 145
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=67.52 E-value=3.6 Score=37.05 Aligned_cols=34 Identities=35% Similarity=0.370 Sum_probs=30.5
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCccccccCc
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVCKHN 36 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~~~ 36 (444)
.|+.++|.+||++||+++..|..|.|+.+.+...
T Consensus 157 ~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~ 190 (235)
T COG0666 157 NGDADIVELLLEAGADPNSRNSYGVTALDPAAKN 190 (235)
T ss_pred cCchHHHHHHHhcCCCCcccccCCCcchhhhccc
Confidence 4678999999999999999999999999999443
No 146
>KOG0512|consensus
Probab=67.50 E-value=3.6 Score=38.57 Aligned_cols=30 Identities=33% Similarity=0.326 Sum_probs=25.0
Q ss_pred chHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 4 TEKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 4 ~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
|--+||+.||.+||++..+-.+|.||.--|
T Consensus 108 ~h~div~~ll~~gAn~~a~T~~GWTPLhSA 137 (228)
T KOG0512|consen 108 GHLDIVHELLLSGANKEAKTNEGWTPLHSA 137 (228)
T ss_pred CchHHHHHHHHccCCcccccccCccchhhh
Confidence 345899999999999999999999996544
No 147
>KOG0510|consensus
Probab=66.99 E-value=3.7 Score=46.37 Aligned_cols=32 Identities=22% Similarity=0.214 Sum_probs=29.0
Q ss_pred CCchHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 2 SHTEKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 2 ~~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
+.|+-|.|.+||.+|||++.+|.++.||.-.|
T Consensus 282 r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~A 313 (929)
T KOG0510|consen 282 RQGGPESVDNLLGFGASINSKNKDEESPLHFA 313 (929)
T ss_pred HcCChhHHHHHHHcCCcccccCCCCCCchHHH
Confidence 46899999999999999999999999998776
No 148
>KOG0502|consensus
Probab=66.53 E-value=3.3 Score=40.21 Aligned_cols=29 Identities=17% Similarity=0.169 Sum_probs=24.3
Q ss_pred hHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 5 EKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 5 ~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
--++|.-||..|||+|+.+..|.++.|+|
T Consensus 238 hvkcve~Ll~sGAd~t~e~dsGy~~mdlA 266 (296)
T KOG0502|consen 238 HVKCVESLLNSGADVTQEDDSGYWIMDLA 266 (296)
T ss_pred hHHHHHHHHhcCCCcccccccCCcHHHHH
Confidence 35688888888888888888888888877
No 149
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=64.87 E-value=2.2 Score=31.63 Aligned_cols=22 Identities=27% Similarity=0.421 Sum_probs=8.7
Q ss_pred HHhcC-CcceeecCCCCCccccc
Q psy15737 12 LVSKN-ANINIVNGEGRTPRDVC 33 (444)
Q Consensus 12 ll~~~-a~~~~~~~~g~~~~~~~ 33 (444)
||++| +++++.|..|+||.=+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A 23 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWA 23 (56)
T ss_dssp -----T--TT---TTS--HHHHH
T ss_pred CCccCcCCCcCcCCCCCcHHHHH
Confidence 78888 99999999999997766
No 150
>PF12997 DUF3881: Domain of unknown function, E. rectale Gene description (DUF3881); InterPro: IPR024541 This entry represents proteins of unknown function found primarily in Firmicutes. The Eubacterium rectale gene appears to be upregulated in the presence of Bacteroides thetaiotaomicron compared to growth in pure culture [].
Probab=63.97 E-value=6.2 Score=39.47 Aligned_cols=51 Identities=18% Similarity=0.328 Sum_probs=34.1
Q ss_pred ceeecCCCCCccccccCchHHHHHHHHHHHhhhHHHHHHHHHHHhccchhhhcchhh
Q psy15737 19 INIVNGEGRTPRDVCKHNDEARKLLLAAEKTEGIQREHKFLNAARANDLESLNSLAV 75 (444)
Q Consensus 19 ~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~r~g~~~~l~~~~~ 75 (444)
.+--=.+|+.-.-|.|...+++ ...+..+.--+||+|||+||..++.+|.-
T Consensus 137 LsgLa~~GkILLPi~K~~~q~~------~~~~~~~~R~~Li~AAk~GDedAiEsLTl 187 (283)
T PF12997_consen 137 LSGLAVEGKILLPIKKTEEQEE------NEKEESRNRNMLIEAAKNGDEDAIESLTL 187 (283)
T ss_pred EEeeecCCEEEEEcccchhhhH------HHHHHHHHHHHHHHHHHcCCHHHHHhccH
Confidence 3444567888888875544422 12333344456999999999999998765
No 151
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=59.70 E-value=6.9 Score=22.43 Aligned_cols=18 Identities=39% Similarity=0.586 Sum_probs=15.7
Q ss_pred CchHHHHHHHHhcCCcce
Q psy15737 3 HTEKDIVCLLVSKNANIN 20 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~ 20 (444)
.+..++|.+||++|++++
T Consensus 12 ~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 12 NGNLEVVKLLLDKGADIN 29 (30)
T ss_pred cCCHHHHHHHHHcCCCCC
Confidence 478999999999999875
No 152
>PF01397 Terpene_synth: Terpene synthase, N-terminal domain; InterPro: IPR001906 Sequences containing this domain belong to the terpene synthase family. It has been suggested that this gene family be designated tps (for terpene synthase). Sequence comparisons reveal similarities between the monoterpene (C10) synthases, sesquiterpene (C15) synthases and the diterpene (C20) synthases. It has been split into six subgroups on the basis of phylogeny, called Tpsa-Tpsf []. Tpsa includes vetispiridiene synthase Q39979 from SWISSPROT, 5-epi- aristolochene synthase, Q40577 from SWISSPROT and (+)-delta-cadinene synthase P93665 from SWISSPROT . Tpsb includes (-)-limonene synthase, Q40322 from SWISSPROT. Tpsc includes copalyl diphosphate synthase (kaurene synthase A), O04408 from SWISSPROT. Tpsd includes taxadiene synthase, Q41594 from SWISSPROT, pinene synthase, O24475 from SWISSPROT and myrcene synthase, O24474 from SWISSPROT. Tpse includes ent-kaurene synthase B Q39548 from SWISSPROT. Tpsf includes linalool synthase Q9ZPN5 from SWISSPROT. In the fungus Phaeosphaeria sp. (strain L487) the synthesis of ent-kaurene from geranylgeranyl dophosphate is promoted by a single bifunctional protein [].; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 2ONH_A 2ONG_B 3P5R_A 3P5P_A 3N0F_A 3N0G_B 3PYB_A 3PYA_A 3G4F_A 3G4D_B ....
Probab=58.59 E-value=13 Score=35.05 Aligned_cols=64 Identities=20% Similarity=0.205 Sum_probs=50.2
Q ss_pred HHHHhcCCcce------eecCCCCCccccccCchHHHHHHHHHHHhhhHHHHHHHHHHHhccchhhhcchhhH
Q psy15737 10 CLLVSKNANIN------IVNGEGRTPRDVCKHNDEARKLLLAAEKTEGIQREHKFLNAARANDLESLNSLAVI 76 (444)
Q Consensus 10 ~~ll~~~a~~~------~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~r~g~~~~l~~~~~~ 76 (444)
.||-+||=+++ .+|.+|.....++ .+|+-||+=.|.++-+-..|.+|+-|+..-..-|.+++..
T Consensus 98 RLLRqhGy~VS~DvF~~F~d~~g~F~~~l~---~Dv~glLsLYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~ 167 (183)
T PF01397_consen 98 RLLRQHGYYVSSDVFNKFKDEKGNFKESLS---NDVKGLLSLYEASHLRFHGEDILDEARAFTTKHLKSLLSN 167 (183)
T ss_dssp HHHHHTT----GGGGGGGBETTSSBSGGGG---GHHHHHHHHHHHHTT--TT-HHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCcccHHHHhCcccCCCccchhhh---HhHHHHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHhcc
Confidence 58889999886 7899999777555 7889999999999999999999999999999999888764
No 153
>KOG0512|consensus
Probab=56.67 E-value=6 Score=37.14 Aligned_cols=33 Identities=18% Similarity=0.202 Sum_probs=28.1
Q ss_pred HHHHHHHHhcCCcceeecCCCCCccccccCchH
Q psy15737 6 KDIVCLLVSKNANINIVNGEGRTPRDVCKHNDE 38 (444)
Q Consensus 6 ~~~v~~ll~~~a~~~~~~~~g~~~~~~~~~~~~ 38 (444)
.||+-+||++|||+++.-..-+||.-+|-....
T Consensus 143 ~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn 175 (228)
T KOG0512|consen 143 FEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRN 175 (228)
T ss_pred hhHHHHHHhccCcccccccccchhhHHhhcccc
Confidence 589999999999999999999999988744443
No 154
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=54.80 E-value=7.1 Score=43.77 Aligned_cols=73 Identities=16% Similarity=0.108 Sum_probs=47.1
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCcccccc--CchHHHHHHHHHHH---hhhHHHHHHHHHHHhccchhhhcchhh
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVCK--HNDEARKLLLAAEK---TEGIQREHKFLNAARANDLESLNSLAV 75 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~--~~~~~~~~l~~~~~---~~~~~~~~~~l~~~r~g~~~~l~~~~~ 75 (444)
.|..++|.+||++|||++..|..|+||.-+|- .+.++-++|..... ..-..-..-|.-|+..|+.+-+.-|+.
T Consensus 92 ~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 169 (664)
T PTZ00322 92 SGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSR 169 (664)
T ss_pred cCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHh
Confidence 57889999999999999999999999998772 23455555422211 011122234566666776665555443
No 155
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=52.04 E-value=9.7 Score=30.78 Aligned_cols=28 Identities=36% Similarity=0.546 Sum_probs=20.3
Q ss_pred chHHHHHHHHhcCCcceeecCCCCCccc
Q psy15737 4 TEKDIVCLLVSKNANINIVNGEGRTPRD 31 (444)
Q Consensus 4 ~~~~~v~~ll~~~a~~~~~~~~g~~~~~ 31 (444)
++.+++.+|+++|++++..|..|+||--
T Consensus 51 ~~~~~~~~ll~~~~~~~~~~~~~~~~l~ 78 (126)
T cd00204 51 GHLEIVKLLLEKGADVNARDKDGNTPLH 78 (126)
T ss_pred CCHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 4567777777777777777777777754
No 156
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=48.07 E-value=12 Score=30.29 Aligned_cols=73 Identities=26% Similarity=0.340 Sum_probs=46.1
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCccccc---cCchHHHHH-HHHH--HHhhhHHHHHHHHHHHhccchhhhcchhhH
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVC---KHNDEARKL-LLAA--EKTEGIQREHKFLNAARANDLESLNSLAVI 76 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~---~~~~~~~~~-l~~~--~~~~~~~~~~~~l~~~r~g~~~~l~~~~~~ 76 (444)
.++.++|..|++++++.+..+..|.||...+ .. .++... ++.- -.........-+..|++.|+.+.+.-|...
T Consensus 17 ~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~-~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~ 95 (126)
T cd00204 17 NGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGH-LEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKH 95 (126)
T ss_pred cCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCC-HHHHHHHHHcCCCccccCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 4678999999999999999999999884321 23 233333 3311 011112222456778888887776666653
No 157
>KOG0502|consensus
Probab=48.00 E-value=25 Score=34.34 Aligned_cols=83 Identities=17% Similarity=0.200 Sum_probs=50.5
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCccccccCc--hHHHHHHHHHHHhhh-HH--HHHHHHHHHhccchhhhcchhhHh
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVCKHN--DEARKLLLAAEKTEG-IQ--REHKFLNAARANDLESLNSLAVIE 77 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~~~--~~~~~~l~~~~~~~~-~~--~~~~~l~~~r~g~~~~l~~~~~~~ 77 (444)
||--++|++||+.|||+.+.-...-++.-+|... .+|-.||...+-.-- .. ==.-||=|+|.|-..-..+|+.+
T Consensus 170 ~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~s- 248 (296)
T KOG0502|consen 170 KGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNS- 248 (296)
T ss_pred cCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhc-
Confidence 5667788888888888888877777888877322 344455432211000 00 01236778888888888888876
Q ss_pred hhhhhhhhcc
Q psy15737 78 KGVLEFFKNK 87 (444)
Q Consensus 78 e~~~~~~~~~ 87 (444)
|-.-+.+.+
T Consensus 249 -GAd~t~e~d 257 (296)
T KOG0502|consen 249 -GADVTQEDD 257 (296)
T ss_pred -CCCcccccc
Confidence 444444555
No 158
>KOG1710|consensus
Probab=47.08 E-value=17 Score=36.65 Aligned_cols=31 Identities=29% Similarity=0.493 Sum_probs=28.2
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
.|.++|+.|||..||.+.++|+-|+|+.+.|
T Consensus 89 SGn~dvcrllldaGa~~~~vNsvgrTAaqmA 119 (396)
T KOG1710|consen 89 SGNQDVCRLLLDAGARMYLVNSVGRTAAQMA 119 (396)
T ss_pred cCCchHHHHHHhccCccccccchhhhHHHHH
Confidence 4789999999999999999999999998876
No 159
>KOG0507|consensus
Probab=43.65 E-value=8.9 Score=43.11 Aligned_cols=33 Identities=24% Similarity=0.367 Sum_probs=30.4
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCccccccCc
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVCKHN 36 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~~~ 36 (444)
-|.+|||.+||+.|.++.+.|+.|||..|.- .|
T Consensus 231 cgk~evvr~ll~~gin~h~~n~~~qtaldil-~d 263 (854)
T KOG0507|consen 231 CGKAEVVRFLLEIGINTHIKNQHGQTALDII-ID 263 (854)
T ss_pred cCcchhhhHHHhhccccccccccchHHHHHH-Hh
Confidence 3789999999999999999999999999987 55
No 160
>KOG0510|consensus
Probab=38.63 E-value=25 Score=40.09 Aligned_cols=32 Identities=19% Similarity=0.272 Sum_probs=28.2
Q ss_pred chHHHHHHHHhcCCcceeecCCCCCccccccCc
Q psy15737 4 TEKDIVCLLVSKNANINIVNGEGRTPRDVCKHN 36 (444)
Q Consensus 4 ~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~~~ 36 (444)
.+.++|+.||++|||+...|-.+++|..+| .+
T Consensus 99 ~~~~~i~~Lls~gad~~~~n~~~~aplh~A-~~ 130 (929)
T KOG0510|consen 99 NQGDKIQVLLSYGADTPLRNLNKNAPLHLA-AD 130 (929)
T ss_pred chHHHHHHHHhcCCCCChhhhhccCchhhc-cc
Confidence 467899999999999999999999999999 44
No 161
>KOG0509|consensus
Probab=33.51 E-value=14 Score=40.60 Aligned_cols=27 Identities=33% Similarity=0.537 Sum_probs=22.1
Q ss_pred HHHHHHHhcCCcceeecCCCCCccccc
Q psy15737 7 DIVCLLVSKNANINIVNGEGRTPRDVC 33 (444)
Q Consensus 7 ~~v~~ll~~~a~~~~~~~~g~~~~~~~ 33 (444)
.+|.||++.||+.+..|..|+||-|+|
T Consensus 226 ~~v~Ll~~g~~~~d~~~~~g~tp~~LA 252 (600)
T KOG0509|consen 226 TAVKLLLEGGADLDKTNTNGKTPFDLA 252 (600)
T ss_pred ceEehhhhcCCcccccccCCCCHHHHH
Confidence 455588888888888888888888888
No 162
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=33.48 E-value=29 Score=39.23 Aligned_cols=66 Identities=20% Similarity=0.148 Sum_probs=44.7
Q ss_pred CchHHHHHHHHhc--CCcceeecCCCCCccc-cc--cCchHHHHHHHHHHHhhhHHHHHHHHHHHhccchhhh
Q psy15737 3 HTEKDIVCLLVSK--NANINIVNGEGRTPRD-VC--KHNDEARKLLLAAEKTEGIQREHKFLNAARANDLESL 70 (444)
Q Consensus 3 ~~~~~~v~~ll~~--~a~~~~~~~~g~~~~~-~~--~~~~~~~~~l~~~~~~~~~~~~~~~l~~~r~g~~~~l 70 (444)
.|.-+.|..||+. ++|++..|..|+||.- .| ....++.++|..... .-..-+.+|.+|..|....+
T Consensus 27 ~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~--~~~~G~T~Lh~A~~~~~~~v 97 (743)
T TIGR00870 27 RGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC--RGAVGDTLLHAISLEYVDAV 97 (743)
T ss_pred cCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC--CCCcChHHHHHHHhccHHHH
Confidence 5778999999999 9999999999999988 55 233567777654432 11222346666666444333
No 163
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=33.42 E-value=23 Score=27.86 Aligned_cols=69 Identities=28% Similarity=0.316 Sum_probs=40.3
Q ss_pred CCchHHHHHHHHhcCCcceeecCCCCCcccccc--CchHHHHHHHHHHH-hhh--HHHHHHHHHHHhccchhhhcchh
Q psy15737 2 SHTEKDIVCLLVSKNANINIVNGEGRTPRDVCK--HNDEARKLLLAAEK-TEG--IQREHKFLNAARANDLESLNSLA 74 (444)
Q Consensus 2 ~~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~--~~~~~~~~l~~~~~-~~~--~~~~~~~l~~~r~g~~~~l~~~~ 74 (444)
.+|+-++|+.|++.+++++. |+||...|- .+.++-++|-.... -.. ..-..-|.-|++.|+.+-+.-|+
T Consensus 6 ~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 79 (89)
T PF12796_consen 6 QNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKLLL 79 (89)
T ss_dssp HTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 36889999999999999997 888876652 22344444322111 000 11223456677777766554444
No 164
>KOG4214|consensus
Probab=31.85 E-value=19 Score=30.60 Aligned_cols=27 Identities=33% Similarity=0.338 Sum_probs=22.6
Q ss_pred chHHHHHHHHhcCCcceeecCCCCCcc
Q psy15737 4 TEKDIVCLLVSKNANINIVNGEGRTPR 30 (444)
Q Consensus 4 ~~~~~v~~ll~~~a~~~~~~~~g~~~~ 30 (444)
|.-+|...|+..||++.-.|.-|-||.
T Consensus 45 GQl~ilefli~iGA~i~~kDKygITPL 71 (117)
T KOG4214|consen 45 GQLSILEFLISIGANIQDKDKYGITPL 71 (117)
T ss_pred chHHHHHHHHHhccccCCccccCCcHH
Confidence 556889999999999998888887774
No 165
>COG3931 Predicted N-formylglutamate amidohydrolase [Amino acid transport and metabolism]
Probab=31.67 E-value=1.1e+02 Score=30.17 Aligned_cols=82 Identities=23% Similarity=0.260 Sum_probs=48.2
Q ss_pred CCCCCCCCCCCCCCCCCcccccc--CCCCCCCHHHHHHHHHHHH------------Hh--CCCeeEEEEeCCCCCccc--
Q psy15737 341 LNRNWGFHWGGVGSSKEQCQQIY--AGTGPFSEPETQAVSRFIL------------AN--NANMKAFVTFHSYGQYIL-- 402 (444)
Q Consensus 341 LNRNf~~~W~~~g~s~~pc~~~y--~G~~p~SepEtral~~~i~------------~~--~~~~~~~idlHs~g~~il-- 402 (444)
.||-.+.- +.--+-|+.| +|..+.|+.|-++-.+.+. +. ..+.-+.+++|||-.++-
T Consensus 86 cNRp~d~p-----~lip~~Se~~~VPgN~~ls~~ER~~R~~~~~~PfH~av~~~ia~r~AaG~~~~vvsvHSFTPvy~G~ 160 (263)
T COG3931 86 CNRPEDAP-----DLIPQLSEGTVVPGNHPLSEEERRARIDRFYRPFHEAVTRIIAERAAAGRAPFVVSVHSFTPVYKGR 160 (263)
T ss_pred CCCCCCcc-----hhhhccccceeccCCCCCCHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCcEEEEEeccCccccCC
Confidence 99976521 1122345555 7899999999877655442 11 257788999999887542
Q ss_pred -ccCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q psy15737 403 -YPWGYNKKVPPDYADLDRVGRAAAEAMRV 431 (444)
Q Consensus 403 -yP~g~~~~~~~d~~~l~~la~~~a~ai~~ 431 (444)
.||--- ...| .=..++..+..+++.
T Consensus 161 ~Rpw~iG--iL~d--~D~R~a~pll~~lr~ 186 (263)
T COG3931 161 PRPWHIG--ILHD--NDDRLADPLLAALRA 186 (263)
T ss_pred CCccEEE--Eeec--cchhHHHHHHHHHHh
Confidence 233111 1111 123567777777776
No 166
>PF05194 UreE_C: UreE urease accessory protein, C-terminal domain; InterPro: IPR007864 Urease and other nickel metalloenzymes are synthesised as precursors devoid of the metalloenzyme active site. These precursors then undergo a complex post-translational maturation process that requires a number of accessory proteins. Members of this group are nickel-binding proteins required for urease metallocentre assembly []. They are believed to function as metallochaperones to deliver nickel to urease apoprotein [, ]. It has been shown by yeast two-hybrid analysis that UreE forms a dimeric complex with UreG in Helicobacter pylori []. The UreDFG-apoenzyme complex has also been shown to exist [, ] and is believed to be, with the addition of UreE, the assembly system for active urease []. The complexes, rather than the individual proteins, presumably bind to UreB via UreE/H recognition sites. The structure of Klebsiella aerogenes UreE reveals a unique two-domain architecture.The N-terminal domain is structurally related to a heat shock protein, while the C-terminal domain shows homology to the Atx1 copper metallochaperone [, ]. Significantly, the metal-binding sites in UreE and Atx1 are distinct in location and types of residues despite the relationship between these proteins and the mechanism for UreE activation of urease is proposed to be different from the thiol ligand exchange mechanism used by the copper metallochaperones. The C-terminal domain of this protein is the metal-binding region, which can bind up to six Ni molecules per dimer. Most members of this group contain a histidine-rich C-terminal motif that is involved in, but not solely responsible for, binding nickel ions in K. aerogenes UreE []. However, internal ligands, not the histidine residues at the C terminus, are necessary for UreE to assist in urease activation in K. aerogenes [], even though the truncated protein lacking the His-rich region binds two nickel ions instead of six. In H. pylori and some other organisms, the terminal histidine-rich binding sites are absent, but the internal histidine sites are present, and the latter probably function as nickel donors. Deletion analysis shows that this domain alone is sufficient for metal-binding and activation of urease [].; GO: 0016151 nickel ion binding, 0006461 protein complex assembly, 0019627 urea metabolic process; PDB: 3NXZ_B 3TJA_B 3LA0_B 3TJ9_B 3NY0_A 3L9Z_A 3TJ8_A 1EAR_A 1EB0_A 1GMU_B ....
Probab=31.34 E-value=2.3e+02 Score=22.94 Aligned_cols=53 Identities=17% Similarity=0.214 Sum_probs=34.2
Q ss_pred EEEEEEcCCHHHHHHHH-HHHHh-cCCC--CCeEEEEEcCccHHHHHHHHHhcCcceEEEe
Q psy15737 106 KVLTSHISPAAFNLYFS-DVVEK-WGGS--TSNIDIMVKADKVAAVKQYLEKAKLTYEVIL 162 (444)
Q Consensus 106 kV~rv~~~~~~q~~~L~-~l~~~-W~~~--~~~vdV~V~p~~~~~~~~~L~~~~i~~~v~i 162 (444)
.|+.|.+.+..++..|- .|.+. |.-- ++ .|+|+.+. .++++|++.|+.++...
T Consensus 3 ~vl~I~~~~~~~~a~l~~~iGNrH~p~~i~~~--~l~v~~d~--~l~~~L~~lg~~~~~~~ 59 (87)
T PF05194_consen 3 EVLVIRPRDPKEMARLAYHIGNRHWPLFIEED--ELYVPYDH--VLEELLRKLGLEVEKVE 59 (87)
T ss_dssp EEEEEE-SSHHHHHHHHHHHHHTT--EEEETT--EEEEE--H--HHHHHHHHTT-EEEEEE
T ss_pred eEEEEeCCCHHHHHHHHHHHcCCccceEEcCC--EEEecCcH--HHHHHHHHCCCccEEee
Confidence 68999999988877665 46665 4321 23 77888444 47899999998887764
No 167
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=30.87 E-value=1.9e+02 Score=27.70 Aligned_cols=66 Identities=18% Similarity=0.271 Sum_probs=42.7
Q ss_pred CHHHHHHHHHHHHHhCCCeeEEEEeCCCCCc----ccccCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCeeeee
Q psy15737 370 SEPETQAVSRFILANNANMKAFVTFHSYGQY----ILYPWGYNKKVPPDYADLDRVGRAAAEAMRVAGGGAYTFV 440 (444)
Q Consensus 370 SepEtral~~~i~~~~~~~~~~idlHs~g~~----ilyP~g~~~~~~~d~~~l~~la~~~a~ai~~~~g~~Y~~g 440 (444)
++.|.+++++|+.....+..-.+-||.+|.. +-.+|.....++++.+.+..+... + +..|-.+.+|
T Consensus 143 ~~e~i~~ia~~l~~l~~~~~~llpyh~~g~~Ky~~lg~~y~~~~~~~~~~~~l~~~~~~----~-~~~gl~~~i~ 212 (213)
T PRK10076 143 SRENMQQALDVLIPLGIKQIHLLPFHQYGEPKYRLLGKTWSMKEVPAPSSADVATMREM----A-ERAGFQVTVG 212 (213)
T ss_pred CHHHHHHHHHHHHHcCCceEEEecCCccchhHHHHcCCcCccCCCCCcCHHHHHHHHHH----H-HHcCCeEEeC
Confidence 5778999999998874444455899998862 223555556667777777665432 2 3346666554
No 168
>KOG4369|consensus
Probab=30.37 E-value=36 Score=40.44 Aligned_cols=42 Identities=24% Similarity=0.231 Sum_probs=34.8
Q ss_pred CCchHHHHHHHHhcCCcceeecCCCCCccccccCc--hHHHHHH
Q psy15737 2 SHTEKDIVCLLVSKNANINIVNGEGRTPRDVCKHN--DEARKLL 43 (444)
Q Consensus 2 ~~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~~~--~~~~~~l 43 (444)
|-||+++|.|||.+||+=.-+|-+--||+.++... .+|.+||
T Consensus 833 sggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~l 876 (2131)
T KOG4369|consen 833 SGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHAL 876 (2131)
T ss_pred CCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHH
Confidence 67999999999999999999999999999998332 3444444
No 169
>KOG0511|consensus
Probab=30.34 E-value=59 Score=34.14 Aligned_cols=43 Identities=26% Similarity=0.282 Sum_probs=29.6
Q ss_pred chHHHHHHHHhcCCcceeecCCCCCccccccCchHHHHHHHHHH
Q psy15737 4 TEKDIVCLLVSKNANINIVNGEGRTPRDVCKHNDEARKLLLAAE 47 (444)
Q Consensus 4 ~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~ 47 (444)
|-+++|.|||+.||=..---=+|-.|-=-+ -++.|++||....
T Consensus 80 GHe~vvklLLenGAiC~rdtf~G~RC~Yga-Lnd~IR~mllsyd 122 (516)
T KOG0511|consen 80 GHEDVVKLLLENGAICSRDTFDGDRCHYGA-LNDRIRRMLLSYD 122 (516)
T ss_pred CcHHHHHHHHHcCCcccccccCcchhhhhh-hhHHHHHHHHHHH
Confidence 668899999999997764444555554444 5688998865443
No 170
>KOG0783|consensus
Probab=28.48 E-value=37 Score=39.00 Aligned_cols=29 Identities=17% Similarity=0.299 Sum_probs=24.4
Q ss_pred CCchHHHHHHHHhcCCcceeecCC-CCCcc
Q psy15737 2 SHTEKDIVCLLVSKNANINIVNGE-GRTPR 30 (444)
Q Consensus 2 ~~~~~~~v~~ll~~~a~~~~~~~~-g~~~~ 30 (444)
|.+|++++.-||+||+|+.+.|.| |-||.
T Consensus 61 S~~k~~~l~wLlqhGidv~vqD~ESG~taL 90 (1267)
T KOG0783|consen 61 SENKNSFLRWLLQHGIDVFVQDEESGYTAL 90 (1267)
T ss_pred ccchhHHHHHHHhcCceeeeccccccchHh
Confidence 678999999999999999999875 66664
No 171
>KOG4369|consensus
Probab=27.01 E-value=30 Score=41.05 Aligned_cols=73 Identities=21% Similarity=0.203 Sum_probs=48.8
Q ss_pred CchHHHHHHHHhcCCcceeecCCCCCccccc---cCchHHHHHH---HHHHHhhhHHHHHHHHHHHhccchhhhcchhh
Q psy15737 3 HTEKDIVCLLVSKNANINIVNGEGRTPRDVC---KHNDEARKLL---LAAEKTEGIQREHKFLNAARANDLESLNSLAV 75 (444)
Q Consensus 3 ~~~~~~v~~ll~~~a~~~~~~~~g~~~~~~~---~~~~~~~~~l---~~~~~~~~~~~~~~~l~~~r~g~~~~l~~~~~ 75 (444)
.|.+|+|.||+..||++..+|..|-+|.=++ -++..|..|| -+.|....|-++..|-=|+..|+..-+.-|++
T Consensus 767 ggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~ 845 (2131)
T KOG4369|consen 767 GGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLN 845 (2131)
T ss_pred CccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHH
Confidence 4789999999999999999999999998664 2456666666 33444444444544444555555544444433
No 172
>KOG0783|consensus
Probab=26.98 E-value=41 Score=38.62 Aligned_cols=29 Identities=31% Similarity=0.458 Sum_probs=25.8
Q ss_pred chHHHHHHHHhcCCcceeecCCCCCcccc
Q psy15737 4 TEKDIVCLLVSKNANINIVNGEGRTPRDV 32 (444)
Q Consensus 4 ~~~~~v~~ll~~~a~~~~~~~~g~~~~~~ 32 (444)
|--|++-|||+||+...|.|.||..|.|.
T Consensus 97 G~idca~lLL~~g~SL~i~Dkeglsplq~ 125 (1267)
T KOG0783|consen 97 GNIDCASLLLSKGRSLRIKDKEGLSPLQF 125 (1267)
T ss_pred chHHHHHHHHhcCCceEEecccCCCHHHH
Confidence 45689999999999999999999998775
No 173
>cd01304 FMDH_A Formylmethanofuran dehydrogenase (FMDH) subunit A; Methanogenic bacteria and archea derive the energy for autotrophic growth from methanogenesis, the reduction of CO2 with molecular hydrogen as the electron donor. FMDH catalyzes the first step in methanogenesis, the formyl-methanofuran synthesis. In this step, CO2 is bound to methanofuran and subsequently reduced to the formyl state with electrons derived from hydrogen.
Probab=25.29 E-value=6.1e+02 Score=28.05 Aligned_cols=58 Identities=17% Similarity=0.233 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHhCCC------eeEEEEeCCCCCcccccCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCeeeeecc
Q psy15737 372 PETQAVSRFILANNAN------MKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEAMRVAGGGAYTFVLM 442 (444)
Q Consensus 372 pEtral~~~i~~~~~~------~~~~idlHs~g~~ilyP~g~~~~~~~d~~~l~~la~~~a~ai~~~~g~~Y~~g~~ 442 (444)
.-|...++.....+.+ -...+-|||||.. .|+ .+.+-+..+|+++.+--.-...+|+.
T Consensus 241 ~~t~~t~~~~~~~~~~~~~~~~h~tH~qfhsyg~~---~~~----------~~~s~a~~i~~~~n~~~~it~D~G~v 304 (541)
T cd01304 241 ETTLETMKAAEGVKPDPRRQVLHLTHVQFHSYGGT---SWR----------DFESGAERIADYVNANDHVTIDVGQV 304 (541)
T ss_pred HHHHHHHHHhhcCCCccccceeEeeeeeEEeeccC---Ccc----------cHhHHHHHHHHHHHcCCCEEEEeCce
Confidence 4455556665555211 1456788998873 343 34556677888887665555555554
No 174
>TIGR02017 hutG_amidohyd N-formylglutamate amidohydrolase. In some species, histidine is converted to via urocanate and then formimino-L-glutamate to glutamate in four steps, where the fourth step is conversion of N-formimino-L-glutamate to L-glutamate and formamide. In others, that pathway from formimino-L-glutamate may differ, with the next enzyme being formiminoglutamate hydrolase (HutF) yielding N-formyl-L-glutamate. This model represents the enzyme N-formylglutamate deformylase, also called N-formylglutamate amidohydrolase, which then produces glutamate.
Probab=24.34 E-value=1.8e+02 Score=28.83 Aligned_cols=41 Identities=15% Similarity=0.060 Sum_probs=24.9
Q ss_pred ccccCCCCCCCHHHHHHHHH------------HHHHh--CCCeeEEEEeCCCCCc
Q psy15737 360 QQIYAGTGPFSEPETQAVSR------------FILAN--NANMKAFVTFHSYGQY 400 (444)
Q Consensus 360 ~~~y~G~~p~SepEtral~~------------~i~~~--~~~~~~~idlHs~g~~ 400 (444)
.+.|....+.+..|..+.++ .+... .....+.||+|||-..
T Consensus 98 ~~iy~~~~~l~~~e~~~Ri~~yy~PYH~al~~~L~~~~~~~g~~~liD~HSm~s~ 152 (263)
T TIGR02017 98 EPLYRDGEAPSPAEIDDRRTQIFRPYHAALQAEIERLRAQHGYAVLYDAHSIRSV 152 (263)
T ss_pred CccccCCCCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCEEEEEeccCCcc
Confidence 34565555567777766554 22111 2367889999998653
No 175
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=23.40 E-value=3.2e+02 Score=20.58 Aligned_cols=48 Identities=19% Similarity=0.340 Sum_probs=35.7
Q ss_pred EEEEEEcC----CHHHHHHHHHHHHhcCCC------CCeEEEE-EcCccHHHHHHHHHh
Q psy15737 106 KVLTSHIS----PAAFNLYFSDVVEKWGGS------TSNIDIM-VKADKVAAVKQYLEK 153 (444)
Q Consensus 106 kV~rv~~~----~~~q~~~L~~l~~~W~~~------~~~vdV~-V~p~~~~~~~~~L~~ 153 (444)
-.+||.+. +.+++..|.++.+.|... ...+.+. |+++.++.+.+.|++
T Consensus 10 ~~v~~~~~~G~i~~~~l~~la~ia~~yg~~~irlT~~Q~l~l~~v~~~~~~~i~~~L~~ 68 (69)
T PF03460_consen 10 YMVRIRIPGGRISAEQLRALAEIAEKYGDGEIRLTTRQNLQLRGVPEENLPAIFEELKE 68 (69)
T ss_dssp EEEEEB-GGGEEEHHHHHHHHHHHHHHSTSEEEEETTSCEEEEEEEGGGHHHHHHHHHH
T ss_pred EEEEEeCCCEEECHHHHHHHHHHHHHhCCCeEEECCCCeEEEeCCCHHHHHHHHHHHHc
Confidence 46777654 578999999998887743 4456666 999999998888865
No 176
>PHA02046 hypothetical protein
Probab=23.07 E-value=1.4e+02 Score=25.17 Aligned_cols=46 Identities=15% Similarity=0.194 Sum_probs=28.6
Q ss_pred CCCCccccccCchHHHHH---HHHHHHhhhHHHHHHHHHHHhccchhhhc
Q psy15737 25 EGRTPRDVCKHNDEARKL---LLAAEKTEGIQREHKFLNAARANDLESLN 71 (444)
Q Consensus 25 ~g~~~~~~~~~~~~~~~~---l~~~~~~~~~~~~~~~l~~~r~g~~~~l~ 71 (444)
+..+.+|++ ++.++..| |+....+.+++.-+.||+-...|+.+.|-
T Consensus 49 DNnItcdpa-D~~~m~~Lr~e~~~~~a~rr~~~~~~~~~~l~~~D~~~ly 97 (99)
T PHA02046 49 DNEITCDPA-DTINIDRLREEFRQAQAENRRIALEGFIAGLTDDDMERLY 97 (99)
T ss_pred cCCcccCcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHh
Confidence 345677888 66777766 54444444444444588888888877653
No 177
>cd04906 ACT_ThrD-I_1 First of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase). This CD includes the first of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=22.66 E-value=2.7e+02 Score=22.23 Aligned_cols=58 Identities=14% Similarity=0.046 Sum_probs=36.5
Q ss_pred EEEEEE-cCCHHHHHH-HHHHHHhcC----------CCCCeEEEEEc----CccHHHHHHHHHhcCcceEEEecc
Q psy15737 106 KVLTSH-ISPAAFNLY-FSDVVEKWG----------GSTSNIDIMVK----ADKVAAVKQYLEKAKLTYEVILED 164 (444)
Q Consensus 106 kV~rv~-~~~~~q~~~-L~~l~~~W~----------~~~~~vdV~V~----p~~~~~~~~~L~~~~i~~~v~i~d 164 (444)
+|++|. |+.+.++.. +..|. .|. .....+.|.+. +++.+.+.+.|++.|+.+..+-+|
T Consensus 2 ~vl~v~ipD~PG~L~~ll~~l~-~anI~~~~y~~~~~~~~~v~i~ie~~~~~~~~~~i~~~L~~~G~~~~~~~~~ 75 (85)
T cd04906 2 ALLAVTIPERPGSFKKFCELIG-PRNITEFNYRYADEKDAHIFVGVSVANGAEELAELLEDLKSAGYEVVDLSDD 75 (85)
T ss_pred eEEEEecCCCCcHHHHHHHHhC-CCceeEEEEEccCCCeeEEEEEEEeCCcHHHHHHHHHHHHHCCCCeEECCCC
Confidence 578885 566777644 44444 221 12334555444 577899999999999988765443
No 178
>PRK13986 urease subunit alpha; Provisional
Probab=22.53 E-value=2.2e+02 Score=27.65 Aligned_cols=67 Identities=27% Similarity=0.400 Sum_probs=39.5
Q ss_pred hHHHHHH--HHHHHhhhHHH--------------HHHHHHHHhccc--hhhhcc----hhhHh---hhhhhhhhcccccc
Q psy15737 37 DEARKLL--LAAEKTEGIQR--------------EHKFLNAARAND--LESLNS----LAVIE---KGVLEFFKNKSDAR 91 (444)
Q Consensus 37 ~~~~~~l--~~~~~~~~~~~--------------~~~~l~~~r~g~--~~~l~~----~~~~~---e~~~~~~~~~~~~~ 91 (444)
.|.-+|| -|++-+++|+. ...+|+.||+|+ .+.|++ ++.+. +|+.+.+-.- -
T Consensus 6 rE~ekL~i~~a~~lA~~R~~rGlkLN~pEAvAlI~~~i~E~aRdG~~svaelm~~g~~~L~~~dVm~GV~~ml~~v---q 82 (225)
T PRK13986 6 KELDKLMLHYAGELAKKRKEKGIKLNYVEAVALISAHIMEEARAGKKTVAELMQEGRTLLKPDDVMDGVASMIHEV---G 82 (225)
T ss_pred hHHHHHHHHHHHHHHHHHHHcCcccCcHHHHHHHHHHHHHHHhcCCCcHHHHHHHhhhhCCHHhcccChHHhccee---e
Confidence 3444553 66776666653 234899999996 888876 34443 3444433322 1
Q ss_pred cccccccccccCCcEEEEEE
Q psy15737 92 LGLKRKEFKYLDGAKVLTSH 111 (444)
Q Consensus 92 ~~~~~~~~~Y~~g~kV~rv~ 111 (444)
+ ...|=||.||+.|+
T Consensus 83 V-----EatFpDGTkLVtvh 97 (225)
T PRK13986 83 I-----EAMFPDGTKLVTVH 97 (225)
T ss_pred E-----EEEcCCCCEEEEeC
Confidence 1 12234999999994
No 179
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=22.44 E-value=2e+02 Score=24.70 Aligned_cols=27 Identities=22% Similarity=0.325 Sum_probs=12.8
Q ss_pred eEEEEEcCccHHHHHHHHHhcCcceEE
Q psy15737 134 NIDIMVKADKVAAVKQYLEKAKLTYEV 160 (444)
Q Consensus 134 ~vdV~V~p~~~~~~~~~L~~~~i~~~v 160 (444)
+..|.||.+.++.+++.|+...+.-..
T Consensus 2 pF~i~v~~~~l~~l~~rl~~~r~p~~~ 28 (112)
T PF06441_consen 2 PFTIHVPDEELDDLRQRLRATRLPDEP 28 (112)
T ss_dssp B------HHHHHHHHHHHHHS------
T ss_pred CEEEECCHHHHHHHHHHHhccCCCCCC
Confidence 567888989999888888887664433
No 180
>KOG4552|consensus
Probab=22.35 E-value=84 Score=30.24 Aligned_cols=70 Identities=20% Similarity=0.248 Sum_probs=47.0
Q ss_pred hHHHHHHHHhcCCcceeecCCCCCcccccc-CchHHHHHHHHHHHhhhHHHHHHHHHHHhccchhhhcchh
Q psy15737 5 EKDIVCLLVSKNANINIVNGEGRTPRDVCK-HNDEARKLLLAAEKTEGIQREHKFLNAARANDLESLNSLA 74 (444)
Q Consensus 5 ~~~~v~~ll~~~a~~~~~~~~g~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~l~~~r~g~~~~l~~~~ 74 (444)
-||+|.-|...+-.....|||-.--.++.+ .|++|++||+-|+..+++..+-.-|+|--|-+-+.|-.|-
T Consensus 24 ~kelie~l~~~~~qk~l~~gE~v~il~Ll~~kd~ef~~llkla~eq~k~e~~m~~Lea~VEkrD~~IQqLq 94 (272)
T KOG4552|consen 24 VKELIETLINRDKQKMLKNGETVNILKLLDSKDDEFKTLLKLAPEQQKREQLMRTLEAHVEKRDEVIQQLQ 94 (272)
T ss_pred HHHHHHHHHhhhHHHHHhcchHHHHHHHHHhccHHHHHHHHHhHhHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 366776665555555556655544444321 5799999999999999998888889987555555444443
No 181
>PRK13242 ureA urease subunit gamma; Provisional
Probab=22.11 E-value=3e+02 Score=23.41 Aligned_cols=67 Identities=19% Similarity=0.341 Sum_probs=37.0
Q ss_pred hHHHHHH--HHHHHhhhHHHH--------------HHHHHHHhccc-hhhhcc----hhhHh---hhhhhhhhccccccc
Q psy15737 37 DEARKLL--LAAEKTEGIQRE--------------HKFLNAARAND-LESLNS----LAVIE---KGVLEFFKNKSDARL 92 (444)
Q Consensus 37 ~~~~~~l--~~~~~~~~~~~~--------------~~~l~~~r~g~-~~~l~~----~~~~~---e~~~~~~~~~~~~~~ 92 (444)
.|+-+|+ -|++-+++|+.. ..+++.||+|. .+.|.+ ++.+. +|+.+.+..- -+
T Consensus 6 rE~ekL~i~~a~~lA~~R~~rGlkLN~pEAvAlIs~~i~E~aRdG~svaelm~~g~~vL~~~dVm~GV~~mi~~v---qV 82 (100)
T PRK13242 6 REFDKLVIHMLSDVALKRKNKGLKLNHPEAVAVLSAYVLDGAREGKTVEEVMDGARSVLKADDVMDGVPDLLPLI---QV 82 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcccCcHHHHHHHHHHHHHHhhcCCcHHHHHHHHHhhCCHHhcccCHHHhhcce---eE
Confidence 4555553 667766666542 34889999996 444544 33332 3444433332 11
Q ss_pred ccccccccccCCcEEEEEE
Q psy15737 93 GLKRKEFKYLDGAKVLTSH 111 (444)
Q Consensus 93 ~~~~~~~~Y~~g~kV~rv~ 111 (444)
..-|=||.|++.|+
T Consensus 83 -----EatFpDGTkLVTvh 96 (100)
T PRK13242 83 -----EAVFSDGSRLVSLH 96 (100)
T ss_pred -----EEEcCCCCEEEEec
Confidence 12233899998884
No 182
>COG3407 MVD1 Mevalonate pyrophosphate decarboxylase [Lipid metabolism]
Probab=21.92 E-value=6e+02 Score=26.25 Aligned_cols=97 Identities=9% Similarity=0.113 Sum_probs=63.7
Q ss_pred HHHHHHhhhHHHHHHHHHHHhccchhhhcchhhHh-hhhhhhhhcccccccccccccccccCCcEEEEEEcCCHHHHHHH
Q psy15737 43 LLAAEKTEGIQREHKFLNAARANDLESLNSLAVIE-KGVLEFFKNKSDARLGLKRKEFKYLDGAKVLTSHISPAAFNLYF 121 (444)
Q Consensus 43 l~~~~~~~~~~~~~~~l~~~r~g~~~~l~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~Y~~g~kV~rv~~~~~~q~~~L 121 (444)
+=.++.++..+.=+..++++|++|++++..+.-.. ...-++.+.- ... +.-+++++..-++++
T Consensus 205 ~y~~w~~~~~~~~~~m~~~~~~~Df~~i~~~~e~dsl~mHA~l~~s--------~p~--------~~y~~~~s~~ii~~v 268 (329)
T COG3407 205 FYDAWLEHSEEDLEEMKEAIREKDFEKIGELAENDSLEMHATLMSS--------GPP--------FFYLTDESLRIIEFV 268 (329)
T ss_pred HHHHHHHHHHHhHHHHHHHHhccCHHHHHHHHHhhHHHHHHHHhcc--------CCc--------eEEECccHHHHHHHH
Confidence 33444444444434588999999999999887652 1111111111 111 334678888889999
Q ss_pred HHHHHhcCC------CCCeEEEEEcCccHHHHHHHHHhcC
Q psy15737 122 SDVVEKWGG------STSNIDIMVKADKVAAVKQYLEKAK 155 (444)
Q Consensus 122 ~~l~~~W~~------~~~~vdV~V~p~~~~~~~~~L~~~~ 155 (444)
++|.+.|.. .|..|-|++-.+.+..+.+.|....
T Consensus 269 ~~~r~~g~~~~fT~DaGPnV~v~~~~~~l~~~~~~~~~~~ 308 (329)
T COG3407 269 HELRKEGNAVYFTMDAGPNVKVITLEENLIDLLEILKTLE 308 (329)
T ss_pred HHHHhcCCceEEEEcCCCceEEEEecccHHHHHHHHhhcc
Confidence 999876662 2778999999888888777776543
Done!