RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15737
(444 letters)
>d2c1ca1 c.56.5.1 (A:7-309) Carboxypeptidase B {Corn earworm
(Helicoverpa zea) [TaxId: 7113]}
Length = 312
Score = 218 bits (556), Expect = 2e-68
Identities = 89/251 (35%), Positives = 129/251 (51%), Gaps = 17/251 (6%)
Query: 192 MTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV---PNAKAFW 248
+ + Y +E I YLDY+ + YP + T+ + S EGRP++ +KIS+ N +
Sbjct: 1 LPYDNYQELEVIDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKISTTNFEDENKPVIF 60
Query: 249 IDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYEYTHTTERLW 308
IDGGIHAREWI+P +V + + D ++K D+ +LP+ NPDGY+YT T ER W
Sbjct: 61 IDGGIHAREWISPPSV-TWAIHKLVEDVTENDLLEKFDWILLPVVNPDGYKYTFTNERFW 119
Query: 309 RKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGP 368
RK R + S D NRN+ F W +G+S C IYAGT
Sbjct: 120 RKTRSTNNNPLSQICRG-------------ADGNRNFDFVWNSIGTSNSPCSDIYAGTSA 166
Query: 369 FSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEA 428
FSE ET+ V + + A M ++T HS+G ILYPWG++ + + L VG A A
Sbjct: 167 FSEVETRVVRDILHEHLARMALYLTMHSFGSMILYPWGHDGSLSQNALGLHTVGVAMASV 226
Query: 429 MRVAGGGAYTF 439
++ +
Sbjct: 227 IQSNALPNFPP 237
>d1m4la_ c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus) [TaxId:
9913]}
Length = 307
Score = 205 bits (522), Expect = 2e-63
Identities = 89/257 (34%), Positives = 141/257 (54%), Gaps = 20/257 (7%)
Query: 186 GRKGHRMTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAK 245
R + + YH +++I+ ++D L +PQLV+ IGRS EGRP+ ++K S+G N
Sbjct: 1 ARSTNTFNYATYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSNRP 60
Query: 246 AFWIDGGIHAREWITPATVSFILSELVENREAQEDY---IKKIDFYVLPITNPDGYEYTH 302
A WID GIH+REWIT AT + + E+ + + +D ++ +TNPDG+ +TH
Sbjct: 61 AIWIDLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTH 120
Query: 303 TTERLWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQI 362
+ RLWRK R + C G +D NRNW +G G+S C +
Sbjct: 121 SQNRLWRKTRSVTSSS-LCVG---------------VDANRNWDAGFGKAGASSSPCSET 164
Query: 363 YAGTGPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVG 422
Y G SE E +++ F+ ++ N KAF++ HSY Q +LYP+GY + PD +L++V
Sbjct: 165 YHGKYANSEVEVKSIVDFV-KDHGNFKAFLSIHSYSQLLLYPYGYTTQSIPDKTELNQVA 223
Query: 423 RAAAEAMRVAGGGAYTF 439
++A A++ G +Y +
Sbjct: 224 KSAVAALKSLYGTSYKY 240
>d1ayea1 c.56.5.1 (A:1-309) Carboxypeptidase A {Human (Homo sapiens)
[TaxId: 9606]}
Length = 307
Score = 202 bits (515), Expect = 2e-62
Identities = 86/246 (34%), Positives = 132/246 (53%), Gaps = 21/246 (8%)
Query: 192 MTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAKAFWIDG 251
F YH +E+I +D L +P LV+ +IG S E RP+ ++K S+G + A W+D
Sbjct: 6 FNFGAYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTG-GDKPAIWLDA 64
Query: 252 GIHAREWITPATVSFILSELVENREAQEDY---IKKIDFYVLPITNPDGYEYTHTTERLW 308
GIHAREW+T AT + +++V + + +D ++LP+TNPDGY ++ T R+W
Sbjct: 65 GIHAREWVTQATALWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDGYVFSQTKNRMW 124
Query: 309 RKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGP 368
RK R K G C G +D NRNW +GG G+S C Y G
Sbjct: 125 RKTRSKVS-GSLCVG---------------VDPNRNWDAGFGGPGASSNPCSDSYHGPSA 168
Query: 369 FSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEA 428
SE E +++ FI ++ +KAF+ HSY Q +++P+GY D+ +L V + AA++
Sbjct: 169 NSEVEVKSIVDFIK-SHGKVKAFIILHSYSQLLMFPYGYKCTKLDDFDELSEVAQKAAQS 227
Query: 429 MRVAGG 434
+R G
Sbjct: 228 LRSLHG 233
>d1jqga1 c.56.5.1 (A:1-310) Carboxypeptidase A {Cotton bollworm
(Helicoverpa armigera) [TaxId: 29058]}
Length = 317
Score = 199 bits (506), Expect = 6e-61
Identities = 77/252 (30%), Positives = 122/252 (48%), Gaps = 22/252 (8%)
Query: 191 RMTFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV---PNAKAF 247
R++F K H E++ YL LA+ +P +VT+ + G+S EGR ++ ++IS+ +
Sbjct: 6 RLSFDKIHSYEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRISTTNFQDASKPVV 65
Query: 248 WIDGGIHAREWITPATVSFILSELVENREAQEDYIKKIDFYVLPITNPDGYEYTHTTERL 307
+ +H REW+T + + +LV + D I ID+ +LP+ NPDGY +T +R
Sbjct: 66 MMQSLLHCREWVTLPATLYAIHKLVIDVTES-DLINNIDWIILPVANPDGYVHTFGGDRY 124
Query: 308 WRKNRRKSPKGDS-CSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGT 366
WRKNR + C G +DLNRN+G +WG SS C + G
Sbjct: 125 WRKNRATGYMAGNLCMG---------------VDLNRNFGMNWGTASSSSV-CSDTFHGR 168
Query: 367 GPFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAA 426
FSEPE+ + I + M ++ HS+G ILY +G P + L +G A
Sbjct: 169 SAFSEPESSVIRDIIAEHRNRMALYLDIHSFGSMILYGYGNGVL-PSNALQLHLIGVQMA 227
Query: 427 EAMRVAGGGAYT 438
+A+ +
Sbjct: 228 QAIDRVKWSSNK 239
>d1z5ra1 c.56.5.1 (A:6-308) Carboxypeptidase B {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 304
Score = 197 bits (501), Expect = 2e-60
Identities = 87/250 (34%), Positives = 136/250 (54%), Gaps = 19/250 (7%)
Query: 193 TFHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAKAFWIDGG 252
++ KY+ E I + + P L++ T IG + G + L+K+ PN A ++D G
Sbjct: 3 SYEKYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPGPNKPAIFMDCG 62
Query: 253 IHAREWITPATVSFILSELVENREAQE---DYIKKIDFYVLPITNPDGYEYTHTTERLWR 309
HAREWI+ A + + E V + +++ K+DFYVLP+ N DGY YT T R+WR
Sbjct: 63 FHAREWISHAFCQWFVREAVLTYGYESHMTEFLNKLDFYVLPVLNIDGYIYTWTKNRMWR 122
Query: 310 KNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPF 369
K R + G +C G D NRN+ W G+S + C + Y G+
Sbjct: 123 KTRSTNA-GTTCIGTDP---------------NRNFDAGWCTTGASTDPCDETYCGSAAE 166
Query: 370 SEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEAM 429
SE ET+A++ FI N +++KA++T HSY Q ILYP+ Y+ K+P + A+L+ + +AA + +
Sbjct: 167 SEKETKALADFIRNNLSSIKAYLTIHSYSQMILYPYSYDYKLPENNAELNNLAKAAVKEL 226
Query: 430 RVAGGGAYTF 439
G YT+
Sbjct: 227 ATLYGTKYTY 236
>d2bo9a1 c.56.5.1 (A:4-307) Carboxypeptidase A {Human (Homo sapiens)
[TaxId: 9606]}
Length = 305
Score = 181 bits (461), Expect = 1e-54
Identities = 91/245 (37%), Positives = 135/245 (55%), Gaps = 21/245 (8%)
Query: 194 FHKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGVPNAK-AFWIDGG 252
+ YH +E I+ +D +A +P L IG S E RP+ ++K S+G + A W++ G
Sbjct: 6 YGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAVWLNAG 65
Query: 253 IHAREWITPATVSFILSELVENREAQEDY---IKKIDFYVLPITNPDGYEYTHTTERLWR 309
IH+REWI+ AT + ++V + + ++K+D ++LP+ NPDGY YT T RLWR
Sbjct: 66 IHSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWR 125
Query: 310 KNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPF 369
K R ++P G SC G D NRNW + G G+S C ++Y G
Sbjct: 126 KTRSRNP-GSSCIG---------------ADPNRNWNASFAGKGASDNPCSEVYHGPHAN 169
Query: 370 SEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRVGRAAAEAM 429
SE E ++V FI + N K F+ HSY Q ++YP+GY+ K PD +LD+V R AA+A+
Sbjct: 170 SEVEVKSVVDFI-QKHGNFKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVARLAAKAL 228
Query: 430 RVAGG 434
G
Sbjct: 229 ASVSG 233
>d1obra_ c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyces
vulgaris [TaxId: 2026]}
Length = 323
Score = 177 bits (450), Expect = 9e-53
Identities = 77/258 (29%), Positives = 108/258 (41%), Gaps = 29/258 (11%)
Query: 195 HKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV---PNAKAFWIDG 251
YH ++ ++ +A YP +V IG+S EGR L VKIS V N
Sbjct: 7 SGYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDENEPEVLYTA 66
Query: 252 GIHAREWITPATVSFILSELVENREAQE---DYIKKIDFYVLPITNPDGYE--YTHTTER 306
HARE +T + L +N + + + Y++ NPDG E + + +
Sbjct: 67 LHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYK 126
Query: 307 LWRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQ-CQQIYAG 365
WRKNR+ + G S G DLNRN+G+ WG G S + Y G
Sbjct: 127 SWRKNRQPNS-GSSYVG---------------TDLNRNYGYKWGCCGGSSGSPSSETYRG 170
Query: 366 TGPFSEPETQAVSRFI----LANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADLDRV 421
FS PET A+ FI + +K +TFH+Y + ILYP+GY P D
Sbjct: 171 RSAFSAPETAAMRDFINSRVVGGKQQIKTLITFHTYSELILYPYGYTYTDVPSDMTQDDF 230
Query: 422 GRAAAEAMRVAGGGAYTF 439
A +A YT
Sbjct: 231 NVFKTMANTMAQTNGYTP 248
>d1h8la2 c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic domain
{Crested duck (Lophonetta specularioides) [TaxId: 8836]}
Length = 301
Score = 136 bits (343), Expect = 2e-37
Identities = 48/253 (18%), Positives = 86/253 (33%), Gaps = 46/253 (18%)
Query: 195 HKYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV----PNAKAFWID 250
++H D+ +L A YP + L +G+S+E R L +++IS F
Sbjct: 8 FRHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGIHEAGEPEFKYI 67
Query: 251 GGIHAREWITPATVSFILSELVENREAQE---DYIKKIDFYVLPITNPDGYEYTHTTERL 307
G +H E + + ++ L +N D ++ +++P NPDGYE + +R
Sbjct: 68 GNMHGNEVVGRELLLNLIEYLCKNFGTDPEVTDLVQSTRIHIMPSMNPDGYEKSQEGDRG 127
Query: 308 WRKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTG 367
R + DLNRN+ +
Sbjct: 128 GTVGRN---------------------NSNNYDLNRNFPDQFF--------------QVT 152
Query: 368 PFSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWGYNKKVPPDYADL--DRVGRAA 425
+PET AV ++ H + YP+ +++ Y+ D V +
Sbjct: 153 DPPQPETLAVMSWL--KTYPFVLSANLHGGSLVVNYPFDDDEQGIAIYSKSPDDAVFQQL 210
Query: 426 AEAMRVAGGGAYT 438
A + Y
Sbjct: 211 ALSYSKENKKMYQ 223
>d1uwya2 c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 296
Score = 131 bits (329), Expect = 1e-35
Identities = 46/259 (17%), Positives = 83/259 (32%), Gaps = 53/259 (20%)
Query: 196 KYHRMEDIHGYLDYLAQTYPQLVTLTDIGRSLEGRPLRLVKISSGV----PNAKAFWIDG 251
YHR E + +L +AQ Y + L IG+S++GR L ++ + F
Sbjct: 4 NYHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRFPKEHRIGIPEFKYVA 63
Query: 252 GIHAREWITPATVSFILSELVENREAQE---DYIKKIDFYVLPITNPDGYEYTHTTERLW 308
+H E + + ++ LV + + I +++P NPDG+E + +
Sbjct: 64 NMHGDETVGRELLLHLIDYLVTSDGKDPEITNLINSTRIHIMPSMNPDGFEAVKKPDCYY 123
Query: 309 RKNRRKSPKGDSCSGIDLVTYDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGP 368
R + + DLNRN+ +
Sbjct: 124 SIGRE------NYNQ---------------YDLNRNFPDAFE--------------YNNV 148
Query: 369 FSEPETQAVSRFILANNANMKAFVTFHSYGQYILYPWG---------YNKKVPPDYADLD 419
+PET AV +++ + H YP+ Y++ + PD
Sbjct: 149 SRQPETVAVMKWLKTETFVL--SANLHGGALVASYPFDNGVQATGALYSRSLTPDDDVFQ 206
Query: 420 RVGRAAAEAMRVAGGGAYT 438
+ A G
Sbjct: 207 YLAHTYASRNPNMKKGDEC 225
>d1pcaa1 d.58.3.1 (A:4A-99A) Procarboxypeptidase A {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 94
Score = 56.7 bits (137), Expect = 5e-11
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 133 SNIDIMVKADKVAAVKQYLEKAKLTYEVILEDVQRAINEENPEISE 178
ID+ V + AVK +LE + Y +++EDVQ ++EE ++
Sbjct: 45 FPIDVRVPFPSIQAVKVFLEAHGIRYTIMIEDVQLLLDEEQEQMFA 90
>d2boaa2 d.58.3.1 (A:4-99) Procarboxypeptidase A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 94
Score = 56.7 bits (137), Expect = 6e-11
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 133 SNIDIMVKADKVAAVKQYLEKAKLTYEVILEDVQRAINEENPEISEEE 180
+D++V + + A K +L L Y V +ED+Q ++ E+ E+ E
Sbjct: 45 RPVDVLVPSVSLQAFKSFLRSQGLEYAVTIEDLQALLDNEDDEMQHNE 92
>d1ayea2 d.58.3.1 (A:4A-99A) Procarboxypeptidase A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 94
Score = 55.6 bits (134), Expect = 1e-10
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 133 SNIDIMVKADKVAAVKQYLEKAKLTYEVILEDVQRAINEENPEISE 178
+ V V AVK +LE + Y +++EDVQ +++EN E+
Sbjct: 45 ETAHVRVPFVNVQAVKVFLESQGIAYSIMIEDVQVLLDKENEEMLF 90
>d1jqga2 d.58.3.1 (A:4P-100P) Procarboxypeptidase A {Cotton bollworm
(Helicoverpa armigera) [TaxId: 29058]}
Length = 92
Score = 54.1 bits (130), Expect = 4e-10
Identities = 8/53 (15%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 128 WGGSTSN--IDIMVKADKVAAVKQYLEKAKLTYEVILEDVQRAINEENPEISE 178
W + ++V K + +L+++ + Y++ +E+V+ + E+ ++
Sbjct: 35 WSDAVPGRPGKVLVPKFKREIFENFLKQSGVQYKLEVENVKEQLELEDQLLAA 87
>d1kwma2 d.58.3.1 (A:1A-95A) Procarboxypeptidase B {Human (Homo
sapiens) [TaxId: 9606]}
Length = 95
Score = 51.8 bits (124), Expect = 3e-09
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 133 SNIDIMVKADKVAAVKQYLEKAKLTYEVILEDVQRAINEENPE 175
S +D VKA+ V+ L++ +L Y+V++ +++ + +
Sbjct: 50 STVDFRVKAEDTVTVENVLKQNELQYKVLISNLRNVVEAQFDS 92
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 40.7 bits (94), Expect = 2e-04
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 6 KDIVCLLVSKNANINIVNGEGRTPRDVCK-HNDEARKLLL 44
+ LLVS+ A+I I N E +TP V K K ++
Sbjct: 182 VEEAKLLVSQGASIYIENKEEKTPLQVAKGGLGLILKRMV 221
Score = 32.2 bits (72), Expect = 0.086
Identities = 6/36 (16%), Positives = 11/36 (30%)
Query: 1 MSHTEKDIVCLLVSKNANINIVNGEGRTPRDVCKHN 36
S +I +L+ AN + + T
Sbjct: 111 ASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAK 146
Score = 26.1 bits (56), Expect = 7.5
Identities = 2/24 (8%), Positives = 11/24 (45%)
Query: 6 KDIVCLLVSKNANINIVNGEGRTP 29
+++ +++ + + + RT
Sbjct: 17 EELKESILADKSLATRTDQDSRTA 40
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 39.3 bits (90), Expect = 5e-04
Identities = 10/47 (21%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 6 KDIVCLLVSKNANINIVNGEGRTPRDVCKHNDEARKLLLAAEKTEGI 52
++ +LV ++ VN G+T DV + L +K + +
Sbjct: 245 EEACRILVENLCDMEAVNKVGQTAFDVADED--ILGYLEELQKKQNL 289
Score = 31.6 bits (70), Expect = 0.16
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 7 DIVCLLVSKNANINIVNGEGRTPRDVCKHND 37
+ V L+ + A+IN N +G T +D
Sbjct: 54 EEVLRLLERGADINYANVDGLTALHQACIDD 84
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 38.9 bits (89), Expect = 7e-04
Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Query: 6 KDIVCLLVSKNANINIVNGEGRTPRD--VCKHNDEARKLLL---AAEKTEG 51
++ LL+ A+ GRTP + + N +LL A E +G
Sbjct: 205 ASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDG 255
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 38.3 bits (87), Expect = 0.001
Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 1 MSHTEKDIVCLLVSK-NANINIVNGEGRTPRDVCKHNDEARKLLL 44
++ D LLV K A ++V+ +G DV + + +K L
Sbjct: 180 LAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE-QVKKFFL 223
Score = 27.5 bits (59), Expect = 2.9
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 8 IVCLLVSKNANINIVNGEGRTP 29
+ LL SK + + + +GR P
Sbjct: 16 VQELLHSKPSLLLQKDQDGRIP 37
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 38.2 bits (87), Expect = 0.001
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 6 KDIVCLLVSKNANINIVNGEGRTPRDVCKHND--EARKLLL 44
++V L+ + A++ V+ T R + + N+ +
Sbjct: 234 IEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFD 274
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 36.9 bits (84), Expect = 0.004
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 6 KDIVCLLVSKNANINIVNGEGRTPRDVCK---HNDEARKLLLAAEKTEGIQREHK 57
DIV LL+ A+ N V+ +G TP + K + L + ++T + K
Sbjct: 343 TDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDK 397
Score = 33.4 bits (75), Expect = 0.054
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 7 DIVCLLVSKNANINIVNGEGRTP--RDVCKHNDEARKLLLAA 46
IV L+ + A+ N+ N + TP + E K LL
Sbjct: 14 PIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQN 55
Score = 31.9 bits (71), Expect = 0.14
Identities = 9/40 (22%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 7 DIVCLLVSKNANINIVNGEGRTPRD--VCKHNDEARKLLL 44
++ L+ A +N + +TP + KLLL
Sbjct: 47 EVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLL 86
Score = 27.2 bits (59), Expect = 3.8
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 2 SHTEKDIVCLLVSKNANINIVNGEGRTPRDVCKHND 37
H DIV LL+ + + + G TP + +
Sbjct: 174 HHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQN 209
Score = 27.2 bits (59), Expect = 4.0
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 6 KDIVCLLVSKNANINIVNGEGRTPRDVCKHND 37
+ LL+ ++A+ N G TP V H++
Sbjct: 145 VRVAELLLERDAHPNAAGKNGLTPLHVAVHHN 176
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 36.3 bits (82), Expect = 0.004
Identities = 10/45 (22%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Query: 1 MSHTEKDIVCLLVSKNANINIVNGEGRTPRD--VCKHNDEARKLL 43
+ L+ AN I + R PRD + + + +LL
Sbjct: 164 AREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 208
Score = 27.4 bits (59), Expect = 3.3
Identities = 5/25 (20%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 6 KDIVCLLVSKNANINI-VNGEGRTP 29
++ L+++ A +N ++ G T
Sbjct: 2 AQVISDLLAQGAELNATMDKTGETS 26
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 36.0 bits (81), Expect = 0.005
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 6 KDIVCLLVSKNANINIVNGEGRTPRDVCKHND 37
+V LV A+ ++ N TP V +
Sbjct: 190 LPLVRTLVRSGADSSLKNCHNDTPLMVARSRR 221
Score = 27.5 bits (59), Expect = 2.9
Identities = 6/31 (19%), Positives = 11/31 (35%)
Query: 6 KDIVCLLVSKNANINIVNGEGRTPRDVCKHN 36
+V L ++I N +TP +
Sbjct: 20 HRLVNLFQQGGRELDIYNNLRQTPLHLAVIT 50
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 36.2 bits (82), Expect = 0.006
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 6 KDIVCLLVSKNANINIVNGEGRTPRD 31
IV L+ A+ I N G P D
Sbjct: 272 ISIVDALLDYGADPFIANKSGLRPVD 297
>d1n2aa2 c.47.1.5 (A:1-80) Class beta GST {Escherichia coli [TaxId:
562]}
Length = 80
Score = 29.5 bits (66), Expect = 0.16
Identities = 10/70 (14%), Positives = 26/70 (37%), Gaps = 4/70 (5%)
Query: 146 AVKQYLEKAKLTYEVILEDVQRAINEENPEISEEELAVLTGRKGHRMTFHKYHRMEDIHG 205
A L ++ + ++ D + ++ E ++ AV + + + +
Sbjct: 13 ASHITLRESGKDFTLVSVD----LMKKRLENGDDYFAVNPKGQVPALLLDDGTLLTEGVA 68
Query: 206 YLDYLAQTYP 215
+ YLA + P
Sbjct: 69 IMQYLADSVP 78
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 31.0 bits (68), Expect = 0.22
Identities = 5/24 (20%), Positives = 11/24 (45%)
Query: 6 KDIVCLLVSKNANINIVNGEGRTP 29
+++ + A +N N +TP
Sbjct: 19 MEVIRQVKGDLAFLNFQNNLQQTP 42
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 31.0 bits (69), Expect = 0.29
Identities = 5/23 (21%), Positives = 12/23 (52%)
Query: 7 DIVCLLVSKNANINIVNGEGRTP 29
D +CLL++ + + ++ E
Sbjct: 107 DTLCLLLTSDEIVKVIQAENYQA 129
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 30.7 bits (68), Expect = 0.30
Identities = 10/49 (20%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Query: 1 MSHTEKDIV-CLLVSKNANINIVNGEGRTPRD--VCKHNDEARKLLLAA 46
+ +V LL ++ IN + +G+T V + +LL
Sbjct: 227 VEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR 275
Score = 29.2 bits (64), Expect = 0.88
Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Query: 1 MSHTEKDIVCLLVSKNANINIVNGEGRTP---RDVCKHNDEARKLLLAA 46
+ I LL+ A++N+ G+TP KH ++LL
Sbjct: 194 DDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE 242
Score = 27.2 bits (59), Expect = 4.1
Identities = 10/24 (41%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Query: 7 DIVCLLVSKNANINIVNGE-GRTP 29
D+V L+ AN+N E G TP
Sbjct: 19 DLVQQLLEGGANVNFQEEEGGWTP 42
>d1f2ea2 c.47.1.5 (A:1-80) Class beta GST {Sphingomonas paucimobilis
[TaxId: 13689]}
Length = 80
Score = 28.4 bits (63), Expect = 0.40
Identities = 14/71 (19%), Positives = 23/71 (32%), Gaps = 4/71 (5%)
Query: 146 AVKQYLEKAKLTYEVILEDVQRAINEENPEISEEELAVLTGRKGHRMTFHKYHRMEDIHG 205
A L + +E + D + E E+ L V K +T + +
Sbjct: 13 APHIALRETGADFEAVKVD----LAVRKTEAGEDFLTVNPSGKVPALTLDSGETLTENPA 68
Query: 206 YLDYLAQTYPQ 216
L Y+A P
Sbjct: 69 ILLYIADQNPA 79
>d1ecfa1 c.61.1.1 (A:250-492) Glutamine PRPP amidotransferase,
C-terminal domain {Escherichia coli [TaxId: 562]}
Length = 243
Score = 29.6 bits (66), Expect = 0.58
Identities = 19/104 (18%), Positives = 38/104 (36%), Gaps = 3/104 (2%)
Query: 83 FFKNKSDARLGLKRKEFKYLDGAKVLTSHISPAAFNLYFSDVVEKWGGSTSNIDIMVKAD 142
+ S R + + A +++ AA + F +V G + ++
Sbjct: 114 LLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVY---GIDMPSATELIAHG 170
Query: 143 KVAAVKQYLEKAKLTYEVILEDVQRAINEENPEISEEELAVLTG 186
+ + + A L D+ A+ ENP+I + E +V G
Sbjct: 171 REVDEIRQIIGADGLIFQDLNDLIDAVRAENPDIQQFECSVFNG 214
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 156
Score = 28.3 bits (61), Expect = 1.2
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 7 DIVCLLVSKNANINIVNGEGRTPRDVCKHN 36
+ + L+ N N+N NG GRT V K
Sbjct: 15 EQLTSLLQNNVNVNAQNGFGRTALQVMKLG 44
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 28.3 bits (61), Expect = 1.3
Identities = 9/45 (20%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 1 MSHTEKDIVCLLVSKNANINIVNGEGRTPRD--VCKHNDEARKLL 43
H +++V LL+ A+++ + +T D + N++ ++L
Sbjct: 108 TEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4,
N-terminal domain {Clostridium cellulolyticum, atcc
35319 [TaxId: 1521]}
Length = 454
Score = 27.3 bits (60), Expect = 4.8
Identities = 12/83 (14%), Positives = 26/83 (31%), Gaps = 3/83 (3%)
Query: 329 YDSDEEDEKTIDLNRNWGFHWGGVGSSKEQCQQIYAGTGPFSEPETQAVSRFILANNANM 388
+ ++++T + WG W V E + + + + N
Sbjct: 236 VPNWGKEQQTDIIAYKWGQCWDDVHYGAELLLAKLTNKQLYKDSIEMNLDFWTTGVNGTR 295
Query: 389 KAFVTFHSYGQYILYPWGYNKKV 411
V++ G L+ WG +
Sbjct: 296 ---VSYTPKGLAWLFQWGSLRHA 315
>d2aala1 d.80.1.6 (A:1-129) Malonate semialdehyde decarboxylase,
MSAD {Pseudomonas pavonaceae [TaxId: 47881]}
Length = 129
Score = 26.0 bits (57), Expect = 5.8
Identities = 10/66 (15%), Positives = 23/66 (34%)
Query: 163 EDVQRAINEENPEISEEELAVLTGRKGHRMTFHKYHRMEDIHGYLDYLAQTYPQLVTLTD 222
+ +++ + + V + ++ H+ M L Y + L+T+
Sbjct: 13 DAQIKSLLDAAHGAMVDAFGVPANDRYQTVSQHRPGEMVLEDTGLGYGRSSAVVLLTVIS 72
Query: 223 IGRSLE 228
RS E
Sbjct: 73 RPRSEE 78
>d1pmta2 c.47.1.5 (A:1-80) Class beta GST {Proteus mirabilis [TaxId:
584]}
Length = 80
Score = 25.0 bits (54), Expect = 7.0
Identities = 10/70 (14%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Query: 146 AVKQYLEKAKLTYEVILEDVQRAINEENPEISEEELAVLTGRKGHRMTFHKYHRMEDIHG 205
+ L + L + + D + + E ++ LA+ + + + +
Sbjct: 13 SPHIVLRETGLDFSIERID----LRTKKTESGKDFLAINPKGQVPVLQLDNGDILTEGVA 68
Query: 206 YLDYLAQTYP 215
+ YLA P
Sbjct: 69 IVQYLADLKP 78
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.134 0.397
Gapped
Lambda K H
0.267 0.0395 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,707,785
Number of extensions: 82461
Number of successful extensions: 339
Number of sequences better than 10.0: 1
Number of HSP's gapped: 309
Number of HSP's successfully gapped: 52
Length of query: 444
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 356
Effective length of database: 1,199,356
Effective search space: 426970736
Effective search space used: 426970736
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.5 bits)