Query psy1574
Match_columns 124
No_of_seqs 122 out of 1010
Neff 9.0
Searched_HMMs 29240
Date Fri Aug 16 20:10:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1574.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1574hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ezw_A Glycerol kinase; glycer 100.0 3.2E-31 1.1E-35 204.6 12.8 117 2-124 34-150 (526)
2 3hz6_A Xylulokinase; xylulose, 100.0 6.5E-29 2.2E-33 191.2 9.8 115 2-124 35-149 (511)
3 2p3r_A Glycerol kinase; glycer 100.0 2.8E-28 9.7E-33 187.6 12.9 117 2-124 33-149 (510)
4 3h3n_X Glycerol kinase; ATP-bi 100.0 3.4E-28 1.2E-32 187.0 12.6 117 2-124 35-151 (506)
5 3ll3_A Gluconate kinase; xylul 100.0 1.4E-28 4.7E-33 189.1 10.0 113 2-124 34-146 (504)
6 3ifr_A Carbohydrate kinase, FG 100.0 1.6E-28 5.4E-33 188.9 10.2 116 2-124 37-152 (508)
7 3g25_A Glycerol kinase; IDP007 100.0 5.9E-28 2E-32 185.4 12.6 117 2-124 36-152 (501)
8 4e1j_A Glycerol kinase; struct 100.0 9.9E-28 3.4E-32 185.0 12.5 117 2-124 56-172 (520)
9 3l0q_A Xylulose kinase; xlylul 99.9 1.8E-27 6.2E-32 184.6 10.0 113 2-124 35-156 (554)
10 2zf5_O Glycerol kinase; hypert 99.9 8.9E-27 3E-31 178.7 11.5 115 2-124 33-147 (497)
11 3jvp_A Ribulokinase; PSI-II, N 99.9 6.1E-27 2.1E-31 182.3 7.6 115 5-124 44-175 (572)
12 2d4w_A Glycerol kinase; alpha 99.9 5.4E-26 1.9E-30 174.6 12.5 117 2-124 32-148 (504)
13 2dpn_A Glycerol kinase; thermu 99.9 1.2E-25 4.1E-30 172.3 12.3 117 2-124 32-148 (495)
14 2w40_A Glycerol kinase, putati 99.9 1.2E-25 4.2E-30 172.6 10.4 119 2-124 34-152 (503)
15 2itm_A Xylulose kinase, xylulo 99.9 3.3E-25 1.1E-29 169.4 10.4 112 2-124 30-141 (484)
16 4bc3_A Xylulose kinase; transf 99.9 1.5E-25 5.2E-30 173.4 7.5 105 13-124 62-187 (538)
17 3i8b_A Xylulose kinase; strain 99.9 2.6E-25 8.9E-30 171.3 7.9 108 8-124 36-156 (515)
18 2uyt_A Rhamnulokinase; rhamnos 99.9 3.9E-25 1.3E-29 169.1 8.5 108 6-124 42-149 (489)
19 3h6e_A Carbohydrate kinase, FG 99.9 4.7E-25 1.6E-29 168.8 7.7 105 2-124 36-142 (482)
20 1z05_A Transcriptional regulat 93.7 0.25 8.6E-06 36.8 7.2 56 15-77 142-198 (429)
21 1z6r_A MLC protein; transcript 92.6 0.15 5.2E-06 37.6 4.6 38 14-54 118-155 (406)
22 2qm1_A Glucokinase; alpha-beta 92.6 0.34 1.2E-05 34.4 6.3 37 15-54 41-77 (326)
23 2hoe_A N-acetylglucosamine kin 90.9 0.31 1.1E-05 35.7 4.6 56 15-77 122-178 (380)
24 1xho_A Chorismate mutase; sout 88.7 1.1 3.6E-05 28.8 5.1 36 15-53 44-79 (148)
25 3vgl_A Glucokinase; ROK family 88.4 1.1 3.7E-05 31.9 5.7 52 15-78 35-87 (321)
26 1dbf_A Protein (chorismate mut 87.3 1.2 4E-05 27.9 4.6 36 15-53 15-50 (127)
27 2ch5_A NAGK protein; transfera 86.5 0.72 2.4E-05 33.0 3.9 67 14-83 42-117 (347)
28 4db3_A Glcnac kinase, N-acetyl 85.6 2.5 8.6E-05 30.1 6.4 49 16-75 59-107 (327)
29 1ufy_A Chorismate mutase; shik 85.5 1.7 5.8E-05 27.0 4.7 36 15-53 14-50 (122)
30 2yhw_A Bifunctional UDP-N-acet 85.2 1.5 5.1E-05 31.4 5.1 68 15-86 63-150 (343)
31 3r8e_A Hypothetical sugar kina 85.2 1.9 6.5E-05 30.6 5.5 56 15-81 54-111 (321)
32 2ov7_A 50S ribosomal protein L 76.1 4 0.00014 25.9 4.1 51 11-62 85-135 (137)
33 1zc6_A Probable N-acetylglucos 75.8 5.3 0.00018 28.0 5.1 35 15-52 47-83 (305)
34 3htv_A D-allose kinase, alloki 70.4 3.1 0.00011 29.5 2.9 51 17-77 43-94 (310)
35 1mzp_A 50S ribosomal protein L 70.3 8.7 0.0003 26.1 5.0 48 11-62 170-217 (217)
36 2ftc_A Mitochondrial ribosomal 69.0 9.5 0.00033 25.3 4.9 50 11-62 136-185 (189)
37 2kyg_C Protein CBFA2T1; protei 67.6 6.6 0.00022 18.8 2.7 26 6-34 5-30 (38)
38 3vov_A Glucokinase, hexokinase 64.9 14 0.00048 25.9 5.3 43 16-68 35-77 (302)
39 2wwq_5 50S ribosomal protein L 61.0 13 0.00044 25.6 4.4 51 11-62 176-226 (234)
40 3u42_A 50S ribosomal protein L 59.3 14 0.00047 25.4 4.3 51 11-62 177-227 (229)
41 3j21_A 50S ribosomal protein L 55.6 20 0.00067 24.3 4.6 50 9-61 166-215 (216)
42 2zkr_5 60S ribosomal protein L 54.8 16 0.00054 24.7 4.0 47 11-60 165-211 (212)
43 3qoy_A 50S ribosomal protein L 52.1 20 0.00068 24.8 4.2 51 11-62 180-230 (242)
44 1v8d_A Hypothetical protein (T 51.3 31 0.0011 23.6 4.8 42 18-62 41-82 (235)
45 1hux_A Activator of (R)-2-hydr 47.4 9.1 0.00031 26.5 1.9 33 22-58 40-72 (270)
46 3qbx_A Anhydro-N-acetylmuramic 47.2 25 0.00085 25.9 4.2 30 21-53 67-96 (371)
47 1uiz_A MIF, macrophage migrati 45.3 32 0.0011 20.2 3.9 77 17-107 16-93 (115)
48 3cqy_A Anhydro-N-acetylmuramic 45.2 26 0.0009 25.8 4.1 35 20-59 70-104 (370)
49 1i2a_A 50S ribosomal protein L 42.5 37 0.0013 22.9 4.3 45 11-58 165-209 (219)
50 1vp5_A 2,5-diketo-D-gluconic a 40.9 35 0.0012 24.0 4.1 12 43-54 144-155 (298)
51 2e2o_A Hexokinase; acetate and 40.8 21 0.00073 24.6 3.0 68 10-85 34-104 (299)
52 3up8_A Putative 2,5-diketo-D-g 40.1 39 0.0013 23.7 4.3 13 43-55 150-162 (298)
53 1hw6_A 2,5-diketo-D-gluconic a 35.7 47 0.0016 22.9 4.1 12 43-54 131-142 (278)
54 2gel_A Putative GRAM negative 34.4 46 0.0016 22.5 3.7 28 22-52 36-63 (231)
55 3bbo_D Ribosomal protein L1; l 34.4 31 0.0011 25.3 3.0 53 9-62 288-340 (352)
56 3eau_A Voltage-gated potassium 34.3 55 0.0019 23.0 4.3 12 43-54 146-157 (327)
57 3gqe_A Non-structural protein 34.2 53 0.0018 21.2 3.9 36 22-62 85-120 (168)
58 2vhf_A Ubiquitin carboxyl-term 34.2 9.1 0.00031 28.3 0.2 20 11-30 94-113 (374)
59 1mzr_A 2,5-diketo-D-gluconate 33.4 50 0.0017 23.1 4.0 12 43-54 151-162 (296)
60 3n2t_A Putative oxidoreductase 33.3 55 0.0019 23.4 4.2 12 43-54 168-179 (348)
61 3f7j_A YVGN protein; aldo-keto 32.7 57 0.0019 22.5 4.1 12 43-54 133-144 (276)
62 2aal_A Malonate semialdehyde d 31.4 87 0.003 18.8 6.3 29 75-107 73-101 (131)
63 3n6q_A YGHZ aldo-keto reductas 31.3 63 0.0022 22.9 4.3 13 43-55 160-172 (346)
64 3zyy_X Iron-sulfur cluster bin 31.1 68 0.0023 25.4 4.6 45 18-62 262-310 (631)
65 3r6m_A YEAZ, resuscitation pro 30.9 53 0.0018 22.0 3.6 26 23-51 38-63 (213)
66 3iz5_A 60S ribosomal protein L 30.4 40 0.0014 22.7 2.9 43 11-56 169-211 (216)
67 1vbj_A Prostaglandin F synthas 30.4 45 0.0015 23.1 3.3 13 43-55 136-148 (281)
68 3b3e_A YVGN protein; aldo-keto 29.3 71 0.0024 22.5 4.2 12 43-54 167-178 (310)
69 2ivn_A O-sialoglycoprotein end 29.0 53 0.0018 23.3 3.5 27 22-51 49-75 (330)
70 1gve_A Aflatoxin B1 aldehyde r 28.9 75 0.0026 22.3 4.3 12 43-54 131-142 (327)
71 3lut_A Voltage-gated potassium 28.9 73 0.0025 22.9 4.3 12 43-54 180-191 (367)
72 3eno_A Putative O-sialoglycopr 28.5 48 0.0017 23.7 3.2 29 21-52 53-81 (334)
73 3gud_A NECK appendage protein; 28.3 46 0.0016 20.7 2.6 35 37-72 58-92 (129)
74 3o3r_A Aldo-keto reductase fam 28.3 65 0.0022 22.6 3.8 29 15-55 136-164 (316)
75 3ln3_A Dihydrodiol dehydrogena 28.2 62 0.0021 22.7 3.7 30 15-56 143-172 (324)
76 2dx6_A Hypothetical protein TT 28.1 40 0.0014 21.2 2.5 37 16-61 85-121 (159)
77 2bp1_A Aflatoxin B1 aldehyde r 27.9 78 0.0027 22.7 4.3 13 43-55 164-176 (360)
78 2wzm_A Aldo-keto reductase; ox 27.7 46 0.0016 23.1 2.9 12 43-54 139-150 (283)
79 2a6a_A Hypothetical protein TM 27.7 44 0.0015 22.4 2.7 28 22-52 47-74 (218)
80 1ur3_M Hypothetical oxidoreduc 27.3 70 0.0024 22.5 3.9 13 43-55 171-183 (319)
81 3erp_A Putative oxidoreductase 27.2 80 0.0027 22.5 4.2 12 43-54 181-192 (353)
82 1pyf_A IOLS protein; beta-alph 27.1 67 0.0023 22.4 3.7 12 43-54 147-158 (312)
83 3krb_A Aldose reductase; ssgci 26.7 87 0.003 22.2 4.3 28 16-55 153-180 (334)
84 1pz1_A GSP69, general stress p 26.4 66 0.0023 22.8 3.6 12 43-54 147-158 (333)
85 3v0s_A Perakine reductase; AKR 26.2 86 0.0029 22.2 4.2 13 43-55 148-160 (337)
86 3gpg_A NSP3, non-structural pr 26.2 75 0.0026 20.5 3.5 20 43-62 107-126 (168)
87 1rbl_M Ribulose 1,5 bisphospha 26.1 1.1E+02 0.0038 18.3 5.0 37 12-57 62-98 (109)
88 4gie_A Prostaglandin F synthas 26.1 85 0.0029 21.7 4.1 13 43-55 140-152 (290)
89 1s1p_A Aldo-keto reductase fam 26.0 73 0.0025 22.5 3.8 28 16-55 143-170 (331)
90 2y8n_B 4-hydroxyphenylacetate 25.9 45 0.0015 19.2 2.1 24 48-72 16-39 (86)
91 3zyt_A Esterase A, ESTA; hydro 25.9 42 0.0014 24.1 2.5 41 22-70 11-51 (372)
92 1afs_A 3-alpha-HSD, 3-alpha-hy 25.6 75 0.0026 22.3 3.8 27 16-54 143-169 (323)
93 3nyi_A FAT acid-binding protei 24.9 90 0.0031 21.9 4.0 41 13-56 44-98 (297)
94 1svd_M Ribulose bisphosphate c 24.8 1.2E+02 0.0041 18.2 5.0 37 12-57 64-100 (110)
95 1mi3_A Xylose reductase, XR; a 24.7 83 0.0028 22.1 3.8 27 16-54 146-172 (322)
96 1zgd_A Chalcone reductase; pol 24.3 67 0.0023 22.5 3.3 29 15-55 142-170 (312)
97 3p52_A NH(3)-dependent NAD(+) 24.2 1E+02 0.0035 21.0 4.1 37 15-57 4-40 (249)
98 3fiu_A NH(3)-dependent NAD(+) 24.1 1E+02 0.0035 21.0 4.1 37 15-57 7-43 (249)
99 1lqa_A TAS protein; TIM barrel 24.0 85 0.0029 22.1 3.8 13 43-55 171-183 (346)
100 4htl_A Beta-glucoside kinase; 24.0 1.1E+02 0.0036 21.2 4.2 31 43-77 55-87 (297)
101 2bgs_A Aldose reductase; holoe 23.7 1E+02 0.0036 22.0 4.3 28 16-55 167-194 (344)
102 3kjj_A NMB1025 protein; YJGF p 23.5 1.1E+02 0.0038 18.5 3.8 30 17-46 40-69 (128)
103 3buv_A 3-OXO-5-beta-steroid 4- 23.5 87 0.003 22.0 3.8 28 16-55 146-173 (326)
104 3h7r_A Aldo-keto reductase; st 23.4 67 0.0023 22.8 3.2 29 15-55 150-178 (331)
105 3b3d_A YTBE protein, putative 23.3 88 0.003 22.0 3.7 13 43-55 171-183 (314)
106 3j20_Q 30S ribosomal protein S 23.0 46 0.0016 21.5 2.0 51 4-73 17-67 (158)
107 4h0c_A Phospholipase/carboxyle 22.6 1.3E+02 0.0045 19.3 4.4 31 21-51 78-108 (210)
108 1us0_A Aldose reductase; oxido 22.6 73 0.0025 22.3 3.2 28 16-55 137-164 (316)
109 4gac_A Alcohol dehydrogenase [ 22.5 76 0.0026 22.2 3.3 29 15-55 137-165 (324)
110 3hdc_A Thioredoxin family prot 22.5 73 0.0025 19.2 2.9 34 55-89 117-150 (158)
111 2qas_A SSPB, hypothetical prot 22.5 97 0.0033 19.9 3.4 40 20-59 20-60 (157)
112 4ewp_A 3-oxoacyl-[acyl-carrier 22.0 86 0.0029 22.1 3.5 28 24-54 66-93 (350)
113 3brc_A Conserved protein of un 21.9 35 0.0012 21.8 1.2 26 47-73 102-127 (156)
114 3h7u_A Aldo-keto reductase; st 21.9 75 0.0026 22.6 3.2 28 15-54 154-181 (335)
115 3u66_A SCIP/TSSL, putative typ 21.6 72 0.0025 20.9 2.8 35 13-47 28-62 (183)
116 1xng_A NH(3)-dependent NAD(+) 21.5 1.4E+02 0.0047 20.3 4.4 39 14-58 2-40 (268)
117 2nys_A AGR_C_3712P; SSPB, stri 21.4 1.1E+02 0.0036 20.1 3.5 39 20-58 12-51 (176)
118 1woq_A Inorganic polyphosphate 21.4 1.8E+02 0.0062 19.5 5.0 18 16-33 50-67 (267)
119 1qwk_A Aldose reductase, aldo- 21.4 88 0.003 21.9 3.4 28 16-55 130-157 (317)
120 2os5_A Acemif; macrophage migr 21.3 71 0.0024 18.8 2.6 77 17-107 16-93 (119)
121 1vhu_A Hypothetical protein AF 21.1 67 0.0023 21.4 2.6 37 16-61 121-157 (211)
122 3gtz_A Putative translation in 20.6 85 0.0029 18.9 2.8 30 17-46 34-63 (124)
123 3zxw_B Ribulose bisphosphate c 20.3 1.6E+02 0.0054 18.0 5.0 34 12-54 61-94 (118)
124 3cpt_A Mitogen-activated prote 20.1 58 0.002 20.7 2.0 41 19-72 15-55 (143)
125 3q6z_A Poly [ADP-ribose] polym 20.1 1.2E+02 0.0041 20.3 3.7 34 22-60 130-163 (214)
No 1
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=99.97 E-value=3.2e-31 Score=204.60 Aligned_cols=117 Identities=41% Similarity=0.821 Sum_probs=109.2
Q ss_pred CcccccCCCCeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCcccccceeeeccCcHH
Q psy1574 2 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYNAIVWSDTRADN 81 (124)
Q Consensus 2 ~~~~~~~~~g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p~i~w~D~R~~~ 81 (124)
+|+.++|+|||+||||++||+++++++++++++ +++++++|+|||||+|++++|+||+++|+||+|+|+|+|.|+.+
T Consensus 34 ~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~---~~~~~~~I~aIgis~q~~~~v~~D~~~G~pl~~ai~W~D~R~~~ 110 (526)
T 3ezw_A 34 EFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAK---ADISSDQIAAIGITNQRETTIVWEKETGKPIYNAIVWQCRRTAE 110 (526)
T ss_dssp ECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---HTCCGGGEEEEEEEECSSCBEEEETTTCCBSSCEECTTCCTTHH
T ss_pred ecCcccCCCCcEEECHHHHHHHHHHHHHHHHHH---cCCChhhEEEEEEeCCCCCEEEEECCCCeEcccceecCCcchHH
Confidence 577889999999999999999999999999886 57888999999999999999999974599999999999999999
Q ss_pred HHHHHHhhCCCCchhhhhhhhCCCCCCcCHHHHHHHHhHccCC
Q psy1574 82 IVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSS 124 (124)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe 124 (124)
+++++.+... .+.++++||+++++.++++||+|+++|+|+
T Consensus 111 ~~~~l~~~~~---~~~i~~~tG~~~~~~~~~~kl~Wl~~~~p~ 150 (526)
T 3ezw_A 111 ICEHLKRDGL---EDYIRSNTGLVIDPYFSGTKVKWILDHVEG 150 (526)
T ss_dssp HHHHHHHTTC---HHHHHHHHCCCSSTTSHHHHHHHHHHHSTT
T ss_pred HHHHHHhhcc---HHHHHHHhCCCCCcccHHHHHHHHHHcCch
Confidence 9999998765 578999999999999999999999999996
No 2
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=99.96 E-value=6.5e-29 Score=191.19 Aligned_cols=115 Identities=21% Similarity=0.235 Sum_probs=106.7
Q ss_pred CcccccCCCCeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCcccccceeeeccCcHH
Q psy1574 2 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYNAIVWSDTRADN 81 (124)
Q Consensus 2 ~~~~~~~~~g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p~i~w~D~R~~~ 81 (124)
++++++|++||+||||++||+++.+++++++ + .++.+.+|++||||+|++++|+||+ +|+|++|+|+|+|.|+.+
T Consensus 35 ~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~-~---~~~~~~~I~~Igis~q~~~~v~~D~-~G~pl~~~i~W~D~R~~~ 109 (511)
T 3hz6_A 35 ALETYGDGNGPVEQDAGDWYDAVQRIASSWW-Q---SGVDARRVSAIVLSGQMQNFLPLDQ-DHEPLHRAVLYSDKRPLK 109 (511)
T ss_dssp ECCCBSTTSSCCEECHHHHHHHHHHHHHHHH-T---TTCCGGGEEEEEEEECCSCBEEECT-TSCBSSCEECTTCCCCHH
T ss_pred ecceecCCCCCEEECHHHHHHHHHHHHHHHH-h---cCCChhHeEEEEEecccccEEEECC-CcCCCcCceecCCCCHHH
Confidence 4677889999999999999999999999997 4 4677889999999999999999999 599999999999999999
Q ss_pred HHHHHHhhCCCCchhhhhhhhCCCCCCcCHHHHHHHHhHccCC
Q psy1574 82 IVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSS 124 (124)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe 124 (124)
+++++.+..+ .+.++++||+++++.++++||+|+++|+||
T Consensus 110 ~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~ 149 (511)
T 3hz6_A 110 EAEEINARHG---ADNLWSALENPMTAASILPKLVFWRASFPQ 149 (511)
T ss_dssp HHHHHHHHHC---HHHHHHHHSSCCSTTSHHHHHHHHHHHCHH
T ss_pred HHHHHHhccC---HHHHHHHHCCCCCchhHHHHHHHHHHhChH
Confidence 9999998765 478999999999999999999999999985
No 3
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=99.95 E-value=2.8e-28 Score=187.60 Aligned_cols=117 Identities=41% Similarity=0.821 Sum_probs=108.1
Q ss_pred CcccccCCCCeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCcccccceeeeccCcHH
Q psy1574 2 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYNAIVWSDTRADN 81 (124)
Q Consensus 2 ~~~~~~~~~g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p~i~w~D~R~~~ 81 (124)
+++..+|++||+||||++||+++.+++++++++ .++++.+|.+|||++|++++|+||+++|+|++|+|+|+|.|+.+
T Consensus 33 ~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~---~~~~~~~I~~Igis~~~~~~v~~D~~~G~~l~~~i~W~D~R~~~ 109 (510)
T 2p3r_A 33 EFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAK---ADISSDQIAAIGITNQRETTIVWEKETGKPIYNAIVWQCRRTAE 109 (510)
T ss_dssp ECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---TTCCGGGEEEEEEEECSSCBEEEETTTCCBSSCEECTTCCTTHH
T ss_pred ecccccCCCCcEEECHHHHHHHHHHHHHHHHHH---cCCChhheEEEEEeCCcCcEEEEECCCCeECcccccccCccHHH
Confidence 466788999999999999999999999999875 57778899999999999999999993499999999999999999
Q ss_pred HHHHHHhhCCCCchhhhhhhhCCCCCCcCHHHHHHHHhHccCC
Q psy1574 82 IVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSS 124 (124)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe 124 (124)
+++++.+..+ .+.++++||+++++.|+++||+|+++|+||
T Consensus 110 ~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe 149 (510)
T 2p3r_A 110 ICEHLKRDGL---EDYIRSNTGLVIDPYFSGTKVKWILDHVEG 149 (510)
T ss_dssp HHHHHHHTTC---HHHHHHHHCCCSSTTSHHHHHHHHHHHSTT
T ss_pred HHHHHHhccc---HHHHHHHhCCCCCcccHHHHHHHHHHcCHH
Confidence 9999998754 578999999999999999999999999996
No 4
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=99.95 E-value=3.4e-28 Score=187.00 Aligned_cols=117 Identities=38% Similarity=0.717 Sum_probs=107.6
Q ss_pred CcccccCCCCeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCcccccceeeeccCcHH
Q psy1574 2 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYNAIVWSDTRADN 81 (124)
Q Consensus 2 ~~~~~~~~~g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p~i~w~D~R~~~ 81 (124)
+++..+|++||+||||++||+++.+++++++++ .++++.+|++||||+|++++++||+++|+|++|+|+|+|.|+.+
T Consensus 35 ~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~---~~~~~~~I~~Igis~~~~~~v~~D~~~G~~l~~~i~w~D~R~~~ 111 (506)
T 3h3n_X 35 EFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIE---SGIRPEAIAGIGITNQRETTVVWDKTTGQPIANAIVWQSRQSSP 111 (506)
T ss_dssp ECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---HTCCGGGEEEEEEEECSSCBEEEETTTCCBSSCEECTTCCTTHH
T ss_pred ecCccCCCCCcEEECHHHHHHHHHHHHHHHHHH---cCCChhheEEEEeeCCcccEEEEeCCCCeECCCceEecCcchHH
Confidence 466778999999999999999999999999876 46777899999999999999999993499999999999999999
Q ss_pred HHHHHHhhCCCCchhhhhhhhCCCCCCcCHHHHHHHHhHccCC
Q psy1574 82 IVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSS 124 (124)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe 124 (124)
+++++.+..+ .+.++++||+++++.++++||+|+++|+||
T Consensus 112 ~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe 151 (506)
T 3h3n_X 112 IADQLKVDGH---TEMIHEKTGLVIDAYFSATKVRWLLDNIEG 151 (506)
T ss_dssp HHHHHHHTTC---HHHHHHHHSCCCCTTSHHHHHHHHHHHSTT
T ss_pred HHHHHHhccC---HHHHHHHhCCCCCchhHHHHHHHHHHhCHH
Confidence 9999998754 578999999999999999999999999996
No 5
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=99.95 E-value=1.4e-28 Score=189.11 Aligned_cols=113 Identities=26% Similarity=0.356 Sum_probs=104.3
Q ss_pred CcccccCCCCeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCcccccceeeeccCcHH
Q psy1574 2 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYNAIVWSDTRADN 81 (124)
Q Consensus 2 ~~~~~~~~~g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p~i~w~D~R~~~ 81 (124)
+++.++|++||+||||++||+++.+++++++++ .+ .+|++||||+|++++|+||+ +|+||+|+|+|+|.|+.+
T Consensus 34 ~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~---~~---~~I~~Igis~q~~~~v~~D~-~G~pl~~~i~W~D~R~~~ 106 (504)
T 3ll3_A 34 GYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQK---ID---GKIAAISWSSQMHSLIGLGS-DDELLTNSITWADNCAKS 106 (504)
T ss_dssp ECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHT---CS---SEEEEEEEEECSSCBEEECT-TSCBSSCEECTTCCTTHH
T ss_pred ecceecCCCCcEEECHHHHHHHHHHHHHHHHHh---CC---CCeEEEEEECCCCcEEEECC-CCCCcccceeCCccCHHH
Confidence 467788999999999999999999999999864 22 78999999999999999999 699999999999999999
Q ss_pred HHHHHHhhCCCCchhhhhhhhCCCCCCcCHHHHHHHHhHccCC
Q psy1574 82 IVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSS 124 (124)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe 124 (124)
+++++.+..+ .+.++++||+++++.++++||+|+++|+||
T Consensus 107 ~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~wl~~~~pe 146 (504)
T 3ll3_A 107 IVQDAKNRGF---AQQIYRKTGMPMHPMAPIYKLLWLKNKKTE 146 (504)
T ss_dssp HHHHHHHHTH---HHHHHHHHCCCSCTTSHHHHHHHHHHHCHH
T ss_pred HHHHHHhccC---HHHHHHHHCCCCCcccHHHHHHHHHHcChH
Confidence 9999998765 578999999999999999999999999985
No 6
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=99.95 E-value=1.6e-28 Score=188.95 Aligned_cols=116 Identities=22% Similarity=0.296 Sum_probs=107.5
Q ss_pred CcccccCCCCeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCcccccceeeeccCcHH
Q psy1574 2 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYNAIVWSDTRADN 81 (124)
Q Consensus 2 ~~~~~~~~~g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p~i~w~D~R~~~ 81 (124)
+++..+|.+||+||||++||+++.+++++++++ .++++.+|++|||++|++++|+||+ +|+|++|+|+|+|.|+.+
T Consensus 37 ~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~---~~~~~~~I~~Igis~~~~~~v~~D~-~G~~l~~~i~W~D~R~~~ 112 (508)
T 3ifr_A 37 PTTLSSPHPGWAEEDPAQWWDNARAVLAELKTT---AGESDWRPGGICVTGMLPAVVLLDD-RGAVLRPSIQQSDGRCGD 112 (508)
T ss_dssp ECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---HCGGGCCEEEEEEEECSSCBEEECT-TSCBCSCEECTTCCCCHH
T ss_pred ecceecCCCCceEECHHHHHHHHHHHHHHHHHh---cCCChhheEEEEEECCCCcEEEECC-CCCCcccceeccccChHH
Confidence 466788999999999999999999999999875 4667789999999999999999999 599999999999999999
Q ss_pred HHHHHHhhCCCCchhhhhhhhCCCCCCcCHHHHHHHHhHccCC
Q psy1574 82 IVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSS 124 (124)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe 124 (124)
+++++.+..+ .+.++++||+++++.++++||+|+++|+||
T Consensus 113 ~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~ 152 (508)
T 3ifr_A 113 EVAELRAEVD---SEAFLARTGNGVTQQLVTAKLRWIERHEPA 152 (508)
T ss_dssp HHHHHHHHSC---HHHHHHHHSSCSSTTSHHHHHHHHHHHCHH
T ss_pred HHHHHHhhcc---HHHHHHHHCCCCChhhHHHHHHHHHHcCHH
Confidence 9999999876 478999999999999999999999999985
No 7
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=99.95 E-value=5.9e-28 Score=185.44 Aligned_cols=117 Identities=38% Similarity=0.731 Sum_probs=107.5
Q ss_pred CcccccCCCCeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCcccccceeeeccCcHH
Q psy1574 2 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYNAIVWSDTRADN 81 (124)
Q Consensus 2 ~~~~~~~~~g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p~i~w~D~R~~~ 81 (124)
+++..+|++||+||||++||+++.+++++++++ .++++.+|.+|||++|++++++||+++|+|++|+|+|+|.|+.+
T Consensus 36 ~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~---~~~~~~~I~~Igis~~~~~~v~~D~~~G~~l~~~i~w~D~R~~~ 112 (501)
T 3g25_A 36 EFKQYFPQSGWVEHDANEIWTSVLAVMTEVINE---NDVRADQIAGIGITNQRETTVVWDKHTGRPIYHAIVWQSRQTQS 112 (501)
T ss_dssp ECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHT---TTCCGGGEEEEEEEECSSCEEEEETTTCCBSSCEECTTCCTTHH
T ss_pred ecccccCCCCcEEECHHHHHHHHHHHHHHHHHh---cCCCcccEEEEEEECCcCcEEEEECCCCeECCCceeeccCChHH
Confidence 456778999999999999999999999999874 56778899999999999999999993399999999999999999
Q ss_pred HHHHHHhhCCCCchhhhhhhhCCCCCCcCHHHHHHHHhHccCC
Q psy1574 82 IVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSS 124 (124)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe 124 (124)
+++++.+..+ .+.++++||+++++.++++||+|+++|+||
T Consensus 113 ~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~ 152 (501)
T 3g25_A 113 ICSELKQQGY---EQTFRDKTGLLLDPYFAGTKVKWILDNVEG 152 (501)
T ss_dssp HHHHHHHTTC---HHHHHHHHSCCSSTTSHHHHHHHHHHHSTT
T ss_pred HHHHHHhccC---HHHHHHHHCCCCCchhHHHHHHHHHHhCHH
Confidence 9999998754 578999999999999999999999999996
No 8
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=99.95 E-value=9.9e-28 Score=184.97 Aligned_cols=117 Identities=46% Similarity=0.802 Sum_probs=107.0
Q ss_pred CcccccCCCCeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCcccccceeeeccCcHH
Q psy1574 2 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYNAIVWSDTRADN 81 (124)
Q Consensus 2 ~~~~~~~~~g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p~i~w~D~R~~~ 81 (124)
+++..+|++||+||||++||+++.+++++++++ .++++.+|++|||++|++++|+||+++|+|++|+|+|+|.|+.+
T Consensus 56 ~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~---~~~~~~~I~~Igis~~g~~~v~~D~~~G~~l~~~i~W~D~R~~~ 132 (520)
T 4e1j_A 56 EFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEK---SGITANDIAAIGITNQRETVVVWDRETGKPIHNAIVWQDRRTAA 132 (520)
T ss_dssp ECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHT---TTCCGGGEEEEEEEECSSCEEEEETTTCCBSSCEECTTCCTTHH
T ss_pred ecccccCCCCcEEECHHHHHHHHHHHHHHHHHh---cCCCcccEEEEEEeCCcceEEEEECCCCeECccccccccCCHHH
Confidence 456778999999999999999999999999874 56778899999999999999999932699999999999999999
Q ss_pred HHHHHHhhCCCCchhhhhhhhCCCCCCcCHHHHHHHHhHccCC
Q psy1574 82 IVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSS 124 (124)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe 124 (124)
+++++.+..+ .+.++++||+++++.++++||+|+++|+||
T Consensus 133 ~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~Wl~~~~Pe 172 (520)
T 4e1j_A 133 FCDKLKKKGL---EKTFVKKTGLLLDPYFSGTKLNWLLSNVKG 172 (520)
T ss_dssp HHHHHHHTTC---HHHHHHHHSSCSSTTSHHHHHHHHHHHSTT
T ss_pred HHHHHHhccc---HHHHHHHHCCCCCchhHHHHHHHHHHcChH
Confidence 9999998754 578999999999999999999999999997
No 9
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=99.94 E-value=1.8e-27 Score=184.63 Aligned_cols=113 Identities=29% Similarity=0.447 Sum_probs=103.6
Q ss_pred CcccccCCCCeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCccc---------ccce
Q psy1574 2 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPL---------YNAI 72 (124)
Q Consensus 2 ~~~~~~~~~g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl---------~p~i 72 (124)
++++++|++||+||||++||+++.+++++++++ .++.+.+|++||||+| +|+|+||+ +|+|| +|+|
T Consensus 35 ~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~---~~~~~~~I~~Igis~~-~~~v~~D~-~G~pl~~~~~~~~~~~ai 109 (554)
T 3l0q_A 35 EITMFKPKADFVEQSSENIWQAVCNAVRDAVNQ---ADINPIQVKGLGFDAT-CSLVVLDK-EGNPLTVSPSGRNEQNVI 109 (554)
T ss_dssp ECCCEEEETTEEEECHHHHHHHHHHHHHHHHHH---HTCCGGGEEEEEEEEC-SCEEEEET-TSCBCCCSTTCCTTCCEE
T ss_pred ecccccCCCCccccCHHHHHHHHHHHHHHHHHH---cCCCHhHEEEEEEcCC-CceEEECC-CCCEeeccCCCCCCCCcE
Confidence 466788999999999999999999999999876 4677789999999999 79999999 59999 8999
Q ss_pred eeeccCcHHHHHHHHhhCCCCchhhhhhhhCCCCCCcCHHHHHHHHhHccCC
Q psy1574 73 VWSDTRADNIVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSS 124 (124)
Q Consensus 73 ~w~D~R~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe 124 (124)
+|+|.|+.++++++.+.. +.++++||+++++.++++||+||++|+||
T Consensus 110 ~W~D~Ra~~~~~~l~~~~-----~~~~~~tG~~~~~~~~~~Kl~Wl~~~~Pe 156 (554)
T 3l0q_A 110 VWMDHRAITQAERINATK-----HPVLEFVGGVISPEMQTPKLLWLKQHMPN 156 (554)
T ss_dssp CTTCCTTHHHHHHHHHHT-----CGGGGGBTTCCCTTSHHHHHHHHHHHCHH
T ss_pred EecccchHHHHHHHHHhH-----HHHHHHhCCCCChhhHHHHHHHHHHhChH
Confidence 999999999999998862 46899999999999999999999999985
No 10
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=99.94 E-value=8.9e-27 Score=178.70 Aligned_cols=115 Identities=40% Similarity=0.742 Sum_probs=105.5
Q ss_pred CcccccCCCCeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCcccccceeeeccCcHH
Q psy1574 2 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYNAIVWSDTRADN 81 (124)
Q Consensus 2 ~~~~~~~~~g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p~i~w~D~R~~~ 81 (124)
+++..+|.+||.||||++||+++.+++++++++ .++++.+|++||||+|++++|+||+ +|+|++|+|+|+|.|+.+
T Consensus 33 ~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~---~~~~~~~i~~Igis~~~~~~v~~D~-~G~~l~~~i~w~D~R~~~ 108 (497)
T 2zf5_O 33 EFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQS---ARIEPNQIAAIGVTNQRETTLVWDK-DGKPLYNAIVWQCRRTAE 108 (497)
T ss_dssp ECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHH---HTCCGGGEEEEEEEECSSCEEEECT-TCCBSSCEECTTCCTTHH
T ss_pred ccceecCCCCcEEECHHHHHHHHHHHHHHHHHh---cCCCcccEEEEEEecCCCcEEEECC-CCCCcccceeecccCcHH
Confidence 456678999999999999999999999999875 3667789999999999999999999 699999999999999999
Q ss_pred HHHHHHhhCCCCchhhhhhhhCCCCCCcCHHHHHHHHhHccCC
Q psy1574 82 IVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSS 124 (124)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe 124 (124)
+++++.+. . .+.++++||.++++.++++||+|+++|+||
T Consensus 109 ~~~~l~~~-~---~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~ 147 (497)
T 2zf5_O 109 MVEEIKRE-Y---GTMIKEKTGLVPDAYFSASKLKWLLDNVPG 147 (497)
T ss_dssp HHHHHHHH-H---HHHHHHHHSSCCCTTSHHHHHHHHHHHSTT
T ss_pred HHHHHHhh-h---HHHHHHHhCCCCCchhHHHHHHHHHHcCHH
Confidence 99999876 3 467999999999999999999999999996
No 11
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=99.93 E-value=6.1e-27 Score=182.28 Aligned_cols=115 Identities=18% Similarity=0.367 Sum_probs=100.0
Q ss_pred cccCC------CCeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCccccc--------
Q psy1574 5 TISPQ------EGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYN-------- 70 (124)
Q Consensus 5 ~~~~~------~g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p-------- 70 (124)
+.+|+ +||+||||++||+++.+++++++++ .++.+.+|++||||+|++++|+||+ +|+||+|
T Consensus 44 ~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~l~~---~~~~~~~I~~Igis~q~~~~v~~D~-~G~pl~~~~~~~~~p 119 (572)
T 3jvp_A 44 QYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAVMKE---SGVDADDVIGIGVDFTACTMLPVDE-EGQPLCLLAQYKDNP 119 (572)
T ss_dssp SBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHHHHC------CCSCEEEEEEEECSSCEEEECT-TSCBGGGSSSTTSSG
T ss_pred ccCCccccCCCCCcEEECHHHHHHHHHHHHHHHHHH---cCCChhHEEEEEEecCCCcEEEECC-CCCCCccCccccccc
Confidence 55666 9999999999999999999999875 4677789999999999999999999 6999998
Q ss_pred ---ceeeeccCcHHHHHHHHhhCCCCchhhhhhhhCCCCCCcCHHHHHHHHhHccCC
Q psy1574 71 ---AIVWSDTRADNIVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSS 124 (124)
Q Consensus 71 ---~i~w~D~R~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe 124 (124)
+|+|+|.|+.++++++.+..+. ..+.++++||+++++.++++||+|+++|+||
T Consensus 120 ~~~ai~W~D~R~~~~~~~l~~~~~~-~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe 175 (572)
T 3jvp_A 120 HSWVKLWKHHAAQDKANAINEMAEK-RGEAFLPRYGGKISSEWMIAKVWQILDEAED 175 (572)
T ss_dssp GGSEECTTCCTTHHHHHHHHHHHHH-HTCTTGGGGTTCCCSSSHHHHHHHHHHHHHH
T ss_pred cccceecCccchHHHHHHHHHhccc-cHHHHHHHhCCCCCchhHHHHHHHHHHhCHH
Confidence 8999999999999999875320 0146888999999999999999999999985
No 12
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=99.93 E-value=5.4e-26 Score=174.64 Aligned_cols=117 Identities=44% Similarity=0.831 Sum_probs=106.2
Q ss_pred CcccccCCCCeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCcccccceeeeccCcHH
Q psy1574 2 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYNAIVWSDTRADN 81 (124)
Q Consensus 2 ~~~~~~~~~g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p~i~w~D~R~~~ 81 (124)
+++..+|.+||.||||++||+++.+++++++++ .++++.+|.+|||++|++++++||+++|+|++|+|.|+|.|+.+
T Consensus 32 ~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~---~~~~~~~i~~Igis~~g~~~v~vD~~~G~~l~~~i~w~D~R~~~ 108 (504)
T 2d4w_A 32 EHDQIFPRAGWVEHNPEQIWNNVREVVGLALTR---GNLTHEDIAAVGITNQRETAVVWDKTTGKPVYNAIVWQDTRTQK 108 (504)
T ss_dssp ECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---TTCCGGGEEEEEEEECSSCBEEEETTTCCBSSCEECTTCCTTHH
T ss_pred ecceecCCCCceeECHHHHHHHHHHHHHHHHHH---cCCCcccEEEEEEeCCCCeEEEEECCCCCCccccceecccChHH
Confidence 456678999999999999999999999999875 46667899999999999999999984499999999999999999
Q ss_pred HHHHHHhhCCCCchhhhhhhhCCCCCCcCHHHHHHHHhHccCC
Q psy1574 82 IVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSS 124 (124)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe 124 (124)
+++++.+..+ .+.++++||.++++.++++||+|+++|+||
T Consensus 109 ~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~ 148 (504)
T 2d4w_A 109 IVDELGGDEG---AEKYKSIVGLPLATYFSGPKIKWILDNVEG 148 (504)
T ss_dssp HHHHHHCSSC---GGGGHHHHSCCSCTTSHHHHHHHHHHHSTT
T ss_pred HHHHHHhhcc---hHHHHHHhCCCCCchhHHHHHHHHHHcChh
Confidence 9999987554 468999999999999999999999999996
No 13
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=99.93 E-value=1.2e-25 Score=172.35 Aligned_cols=117 Identities=39% Similarity=0.756 Sum_probs=105.6
Q ss_pred CcccccCCCCeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCcccccceeeeccCcHH
Q psy1574 2 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYNAIVWSDTRADN 81 (124)
Q Consensus 2 ~~~~~~~~~g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p~i~w~D~R~~~ 81 (124)
+++..+|.+||+||||++||+++.+++++++++ .+++..+|.+|||++|++++++||+++|+|++|+|.|+|.|+.+
T Consensus 32 ~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~---~~~~~~~i~~Igis~~~~~~~~vD~~~G~~l~~~i~w~D~R~~~ 108 (495)
T 2dpn_A 32 EFRQLYPKPGWVEHDPLEIWETTLWAAREVLRR---AGAEAGEVLALGITNQRETTLLWDRKTGKPLHNAIVWQDRRTTP 108 (495)
T ss_dssp ECCEECSSTTCCEECHHHHHHHHHHHHHHHHHH---TTCCGGGCCEEEEEECSSCBEEEETTTCCBSSCEECTTCCTTHH
T ss_pred eeceecCCCCcEeeCHHHHHHHHHHHHHHHHHh---cCCCcccEEEEEEeCCCccEEEEECCCCcCCccceeecccChHH
Confidence 455667999999999999999999999999875 56677899999999999999999984499999999999999999
Q ss_pred HHHHHHhhCCCCchhhhhhhhCCCCCCcCHHHHHHHHhHccCC
Q psy1574 82 IVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSS 124 (124)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe 124 (124)
+++++.+... .+.++++||.++++.++++||+|+++|+||
T Consensus 109 ~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~ 148 (495)
T 2dpn_A 109 LCEALRAKGL---EPLFRERTGLLFDPYFSGTKLVWLLENVPG 148 (495)
T ss_dssp HHHHHHHTTC---HHHHHHHTSCCSCTTSHHHHHHHHHHHSSS
T ss_pred HHHHHHhccc---hhHHHHHhCCCCCchhHHHHHHHHHHcCHH
Confidence 9999987622 468999999999999999999999999996
No 14
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=99.93 E-value=1.2e-25 Score=172.59 Aligned_cols=119 Identities=40% Similarity=0.707 Sum_probs=104.8
Q ss_pred CcccccCCCCeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCcccccceeeeccCcHH
Q psy1574 2 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYNAIVWSDTRADN 81 (124)
Q Consensus 2 ~~~~~~~~~g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p~i~w~D~R~~~ 81 (124)
+++..+|.+||+||||++||+++.+++++++++.. .+++..+|.+|||++|++++++||+++|+|++|+|+|+|.|+.+
T Consensus 34 ~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~-~~~~~~~i~~Igis~~~~~~~~~D~~~G~~l~~~i~w~D~r~~~ 112 (503)
T 2w40_A 34 NHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLK-DKYTSVIIKCIGITNQRETVIIWDRITGKPLYNAIVWLDTRVEE 112 (503)
T ss_dssp ECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHH-HHSSSCEEEEEEEEECSSCEEEEETTTCCBSSCEECTTCCTTHH
T ss_pred eeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHhh-cCCCccceEEEEEcCCcceEEEEECCCCcCCccceeecccCcHH
Confidence 45667799999999999999999999999987520 03556789999999999999999994499999999999999999
Q ss_pred HHHHHHhhCCCCchhhhhhhhCCCCCCcCHHHHHHHHhHccCC
Q psy1574 82 IVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSS 124 (124)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe 124 (124)
+++++.+... .+.++++||.++++.++++||+|+++|+||
T Consensus 113 ~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~ 152 (503)
T 2w40_A 113 LVTEFSAKYN---NNDIQKKTGTYFNTYFSAFKILWLIQNNPE 152 (503)
T ss_dssp HHHHHHHHSC---HHHHHHHHSSCCCSSSHHHHHHHHHHHCHH
T ss_pred HHHHHHhccc---hHHHHHHhCCCCCcccHHHHHHHHHHhChH
Confidence 9999988732 468999999999999999999999999985
No 15
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=99.92 E-value=3.3e-25 Score=169.45 Aligned_cols=112 Identities=29% Similarity=0.464 Sum_probs=101.1
Q ss_pred CcccccCCCCeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCcccccceeeeccCcHH
Q psy1574 2 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYNAIVWSDTRADN 81 (124)
Q Consensus 2 ~~~~~~~~~g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p~i~w~D~R~~~ 81 (124)
++++++|++||+||||++||+++.+++++++++ . ...+|++||||+|++++|+||+ +|+|++|+|.|+|.|+.+
T Consensus 30 ~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~---~--~~~~i~~Igis~~~~~~v~~D~-~G~~l~~~i~w~D~R~~~ 103 (484)
T 2itm_A 30 KLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQ---H--SLQDVKALGIAGQMHGATLLDA-QQRVLRPAILWNDGRCAQ 103 (484)
T ss_dssp ECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---S--CCTTCCEEEEEECSSCBEEECT-TCCBCSCEECTTCCTTHH
T ss_pred ccccccCCCCCEeECHHHHHHHHHHHHHHHHHh---C--CccceEEEEEcCCcCcEEEECC-CcCCCcccceecccCcHH
Confidence 467788999999999999999999999999865 2 2568999999999999999999 599999999999999999
Q ss_pred HHHHHHhhCCCCchhhhhhhhCCCCCCcCHHHHHHHHhHccCC
Q psy1574 82 IVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSS 124 (124)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe 124 (124)
+++++.+..+ .++++||.++++.++++||+|+++|+||
T Consensus 104 ~~~~l~~~~~-----~~~~~tG~~~~~~~~~~kl~wl~~~~P~ 141 (484)
T 2itm_A 104 ECTLLEARVP-----QSRVITGNLMMPGFTAPKLLWVQRHEPE 141 (484)
T ss_dssp HHHHHHHHCT-----THHHHHSSCCCTTSHHHHHHHHHHHCHH
T ss_pred HHHHHHHhHH-----HHHHHhCCCCCcccHHHHHHHHHHhChH
Confidence 9999988753 3567899999999999999999999985
No 16
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=99.92 E-value=1.5e-25 Score=173.37 Aligned_cols=105 Identities=15% Similarity=0.298 Sum_probs=90.8
Q ss_pred eeeCHH-HHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCc--------------------ccccc
Q psy1574 13 AEQDPM-EILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGE--------------------PLYNA 71 (124)
Q Consensus 13 ~e~dp~-~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~--------------------pl~p~ 71 (124)
.||||+ .||+++..+++.+ .+ .++++.+|++||||+|++++|+||+ +|+ |++|+
T Consensus 62 ~eqdp~~~w~~~~~~~~~~l-~~---~~~~~~~I~aIgis~q~~~~v~~D~-~g~~~l~~l~~~~~l~~~~~~~~pl~~a 136 (538)
T 4bc3_A 62 TVTSPVLMWVQALDIILEKM-KA---SGFDFSQVLALSGAGQQHGSIYWKA-GAQQALTSLSPDLRLHQQLQDCFSISDC 136 (538)
T ss_dssp CEEEEHHHHHHHHHHHHHHH-HH---TTCCGGGEEEEEEEECSSCEEEEET-THHHHHHTCCTTSCHHHHHTTCBSCSEE
T ss_pred cccCcHHHHHHHHHHHHHHH-HH---cCCChHHeEEEEecccceeEEEECC-CccccccccccccchhhhccccccccCC
Confidence 468897 5777776666554 33 5778899999999999999999999 575 99999
Q ss_pred eeeeccCcHHHHHHHHhhCCCCchhhhhhhhCCCCCCcCHHHHHHHHhHccCC
Q psy1574 72 IVWSDTRADNIVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSS 124 (124)
Q Consensus 72 i~w~D~R~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe 124 (124)
|+|+|.|+.++++++.+..+. .+.++++||+++++.|+++||+|+++|+||
T Consensus 137 i~W~D~R~~~~~~~l~~~~~~--~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe 187 (538)
T 4bc3_A 137 PVWMDSSTTAQCRQLEAAVGG--AQALSCLTGSRAYERFTGNQIAKIYQQNPE 187 (538)
T ss_dssp ECTTCCCCHHHHHHHHHHHTS--HHHHHHHHSSCCCTTSHHHHHHHHHHHCHH
T ss_pred cccccCcHHHHHHHHHHhhCc--HHHHHHHHCCCCccccHHHHHHHHHHcCHH
Confidence 999999999999999987652 478999999999999999999999999985
No 17
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=99.92 E-value=2.6e-25 Score=171.35 Aligned_cols=108 Identities=21% Similarity=0.354 Sum_probs=94.4
Q ss_pred CCCCeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCcccccceeeeccCcHHHHHHHH
Q psy1574 8 PQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYNAIVWSDTRADNIVDQVL 87 (124)
Q Consensus 8 ~~~g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p~i~w~D~R~~~~~~~~~ 87 (124)
+.+|++||||++||+++.++++++ +. ..+|++||||+|++++|+||+ +|+|++|+|+|+|.|+.++++++.
T Consensus 36 ~~~g~~e~d~~~~~~~i~~~l~~~-------~~-~~~I~~Igis~q~~~~v~~D~-~G~pl~~~i~W~D~R~~~~~~~l~ 106 (515)
T 3i8b_A 36 KHPNGTSVDPSYWWSAFQEAAEQA-------GG-LDDVSALAVGGQQHGMVILDN-QGNVIRDAMLWNDTSSAPQAAALI 106 (515)
T ss_dssp ECCSSSEECTHHHHHHHHHHHHHT-------TC-STTEEEEEEEECSSCBEEECT-TSCBCSCEECTTCCTTHHHHHHHH
T ss_pred eCCCCceECHHHHHHHHHHHHHhc-------CC-ccCceEEEEeCCcceEEEECC-CCCCcCCcceecCCCHHHHHHHHH
Confidence 457899999999999988887653 33 579999999999999999999 699999999999999999999998
Q ss_pred hhCCC-C------------chhhhhhhhCCCCCCcCHHHHHHHHhHccCC
Q psy1574 88 AKFPD-Q------------DKDYLKPICGLPVSPYFSALKLSWLIQNVSS 124 (124)
Q Consensus 88 ~~~~~-~------------~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe 124 (124)
+..+. . ..+.++++||+++++.++++||+|+++|+||
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~Pe 156 (515)
T 3i8b_A 107 EKLGAAPAQDGEPEDPIARGKQRWVKAVGSSPVASYTLTKVAWVAENEPE 156 (515)
T ss_dssp HHHHCSCCCTTCCSSHHHHHHHHHHHHHSSCCCTTSHHHHHHHHHHHCHH
T ss_pred HhcCcccccccccccccchhHHHHHHHHCCCCCchhHHHHHHHHHHcChH
Confidence 87531 0 0167999999999999999999999999985
No 18
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=99.92 E-value=3.9e-25 Score=169.12 Aligned_cols=108 Identities=17% Similarity=0.278 Sum_probs=98.4
Q ss_pred ccCCCCeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCcccccceeeeccCcHHHHHH
Q psy1574 6 ISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYNAIVWSDTRADNIVDQ 85 (124)
Q Consensus 6 ~~~~~g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p~i~w~D~R~~~~~~~ 85 (124)
..|.+|+.||||++||+++.++++++... ..+|++||||+|++++++||+ +|+|++|+|+|+|.|+.+++++
T Consensus 42 ~~~~~g~~e~d~~~~~~~i~~~~~~~~~~-------~~~i~~Igis~q~~~~v~~D~-~G~~l~~~i~w~D~R~~~~~~~ 113 (489)
T 2uyt_A 42 LHSQNGYVTWDVDSLESAIRLGLNKVCAA-------GIAIDSIGIDTWGVDFVLLDQ-QGQRVGLPVAYRDSRTNGLMAQ 113 (489)
T ss_dssp CEEETTEEECCHHHHHHHHHHHHHHHHHT-------TCCCCEEEEEECSSCEEEECT-TSCEESCCBCTTCGGGTTHHHH
T ss_pred ccccCCeEEECHHHHHHHHHHHHHHHHhC-------CCCceEEEEecCcccEEEECC-CCCCccCCccccCCccHHHHHH
Confidence 46889999999999999999999987641 358999999999999999999 5999999999999999999999
Q ss_pred HHhhCCCCchhhhhhhhCCCCCCcCHHHHHHHHhHccCC
Q psy1574 86 VLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSS 124 (124)
Q Consensus 86 ~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe 124 (124)
+.+..+ .+.++++||+++++.++++||+|+++|+||
T Consensus 114 l~~~~~---~~~~~~~tG~~~~~~~~~~kl~Wl~~~~P~ 149 (489)
T 2uyt_A 114 AQQQLG---KRDIYQRSGIQFLPFNTLYQLRALTEQQPE 149 (489)
T ss_dssp HHHHHC---HHHHHHHHCCCCCTTSHHHHHHHHHHHCGG
T ss_pred HHHhcC---HHHHHHHhCCCCCCccHHHHHHHHHhcCch
Confidence 987764 468999999999999999999999999996
No 19
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=99.91 E-value=4.7e-25 Score=168.81 Aligned_cols=105 Identities=11% Similarity=0.112 Sum_probs=93.8
Q ss_pred CcccccCCCCeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCcccccceeeeccCcHH
Q psy1574 2 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYNAIVWSDTRADN 81 (124)
Q Consensus 2 ~~~~~~~~~g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p~i~w~D~R~~~ 81 (124)
+++. +|.+||+||||++||+++.+++++++ + .+|++||||+|++++|+|| + |+|++|+|+|+|.|+.+
T Consensus 36 ~~~~-~~~~g~~eqdp~~~~~~~~~~i~~~~-~--------~~I~aIgis~~~~~~v~~D-~-G~pl~~ai~w~D~R~~~ 103 (482)
T 3h6e_A 36 PSIP-LEIDGIRRLDAPDTGRWLLDVLSRYA-D--------HPVTTIVPVGHGAGIAALT-D-GRLAFPPLDYEQSIPEA 103 (482)
T ss_dssp ECCC-EESSSCEECCHHHHHHHHHHHHHHTT-T--------SCCCEEEEEECSSCEEEEE-T-TEECSCCBCTTSCCCHH
T ss_pred cCCc-ccCCCceeECHHHHHHHHHHHHHHHH-h--------cCCCEEEEecCcCCEEEEC-C-CCEeccccccCCcccHH
Confidence 3443 58899999999999999999998875 2 5899999999999999999 7 99999999999999999
Q ss_pred HHHHHHhhCCCCchhhhhhhhCCCCCCc--CHHHHHHHHhHccCC
Q psy1574 82 IVDQVLAKFPDQDKDYLKPICGLPVSPY--FSALKLSWLIQNVSS 124 (124)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~tG~~~~~~--~~~~kl~wl~~~~Pe 124 (124)
+++++.+..+ .+++||+++++. ++++||+|+++|+||
T Consensus 104 ~~~~l~~~~~------~~~~tG~~~~~~~~~~~~kl~Wl~~~~Pe 142 (482)
T 3h6e_A 104 VMADYRSQRD------PFARTGSPALPDGLNIGSQLWWLDQLHPD 142 (482)
T ss_dssp HHHHHHTTCC------CHHHHCCCCCSTTSSHHHHHHHHHHHSHH
T ss_pred HHHHHHhhCh------HHHHhCCCCCCCchhHHHHHHHHHHcCch
Confidence 9999987542 378999999997 899999999999985
No 20
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=93.66 E-value=0.25 Score=36.75 Aligned_cols=56 Identities=13% Similarity=0.134 Sum_probs=39.3
Q ss_pred eCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCccc-ccceeeecc
Q psy1574 15 QDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPL-YNAIVWSDT 77 (124)
Q Consensus 15 ~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl-~p~i~w~D~ 77 (124)
.+++++++.+.+++++++++ .+++..+|.+|||+..+ ++|.++|..+ .|.+.|.+-
T Consensus 142 ~~~~~~~~~l~~~i~~~~~~---~~~~~~~i~gigi~~pG----~vd~~~g~v~~~~~l~w~~~ 198 (429)
T 1z05_A 142 IDQDDVLARLLFEIEEFFQT---YAAQLDRVTSIAITLPG----LVNSEQGIVLQMPHYNVKNL 198 (429)
T ss_dssp CBHHHHHHHHHHHHHHHHHH---TTTTCCEEEEEEEEESS----EEETTTTEEEECSSSBCSSB
T ss_pred CCHHHHHHHHHHHHHHHHHh---cCCCcCceEEEEEeccC----cEeCCCCeEeecCCCCCCCC
Confidence 46899999999999998875 46666789999998776 4565335443 233445543
No 21
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=92.62 E-value=0.15 Score=37.57 Aligned_cols=38 Identities=16% Similarity=0.309 Sum_probs=30.8
Q ss_pred eeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeeccc
Q psy1574 14 EQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQR 54 (124)
Q Consensus 14 e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~ 54 (124)
+++++++++.+.+++++++++ .+.+..+|.+|||+..+
T Consensus 118 ~~~~~~~~~~l~~~i~~~~~~---~~~~~~~i~gigi~~pG 155 (406)
T 1z6r_A 118 LKDDLPLLDRIISHIDQFFIR---HQKKLERLTSIAITLPG 155 (406)
T ss_dssp SSCSSCHHHHHHHHHHHHHHH---TGGGCCCEEEEEEEESS
T ss_pred CCCHHHHHHHHHHHHHHHHHh---cCCCcCceeEEEEEeec
Confidence 457889999999999998875 44556789999998776
No 22
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=92.62 E-value=0.34 Score=34.36 Aligned_cols=37 Identities=16% Similarity=0.402 Sum_probs=30.4
Q ss_pred eCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeeccc
Q psy1574 15 QDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQR 54 (124)
Q Consensus 15 ~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~ 54 (124)
.+++++++.+.+++++++++ .+++..+|.+|||+..+
T Consensus 41 ~~~~~~~~~l~~~i~~~~~~---~~~~~~~i~~igi~~pG 77 (326)
T 2qm1_A 41 EDGKHIVPSIIESIRHRIDL---YNMKKEDFVGIGMGTPG 77 (326)
T ss_dssp TTTTTHHHHHHHHHHHHHHH---TTCCGGGEEEEEEEESS
T ss_pred CCHHHHHHHHHHHHHHHHHH---cCCCccceeEEEEeccc
Confidence 57889999999999998875 45666789999988775
No 23
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=90.90 E-value=0.31 Score=35.68 Aligned_cols=56 Identities=18% Similarity=0.184 Sum_probs=38.7
Q ss_pred eCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCcccc-cceeeecc
Q psy1574 15 QDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLY-NAIVWSDT 77 (124)
Q Consensus 15 ~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~-p~i~w~D~ 77 (124)
++++++++.+.+++++++++. +.+..+|.+|||+..+ ++|.++|..+. |.+.|.+-
T Consensus 122 ~~~~~~~~~l~~~i~~~~~~~---~~~~~~i~gigi~~pG----~vd~~~g~v~~~~~l~w~~~ 178 (380)
T 2hoe_A 122 SDREETLNVMYRIIDRAKDMM---EKLGSKLSALTVAAPG----PIDTERGIIIDPRNFPLSQI 178 (380)
T ss_dssp CCHHHHHHHHHHHHHHHHHHH---HHTTCCCCEEEEEESS----CEETTTTEECCCSSCTTBTS
T ss_pred CCHHHHHHHHHHHHHHHHHhc---CCCcCcEEEEEEEeec----cEECCCCEEeccCCCCCcCC
Confidence 479999999999999998753 3345678899988776 35653465542 34456544
No 24
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=88.70 E-value=1.1 Score=28.81 Aligned_cols=36 Identities=31% Similarity=0.443 Sum_probs=31.2
Q ss_pred eCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecc
Q psy1574 15 QDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQ 53 (124)
Q Consensus 15 ~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~ 53 (124)
-+++++++++.+.+++++++ -++.+++|..|-||.+
T Consensus 44 Nt~e~I~~At~ELl~eii~~---N~l~~eDIvSv~FTvT 79 (148)
T 1xho_A 44 NTADEIVAETQKLLKEMAEK---NGLEEDDIISIIFTVT 79 (148)
T ss_dssp SSHHHHHHHHHHHHHHHHHH---TTCCGGGEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHH---cCCCHHHEEEEEEEeC
Confidence 46889999999999999875 5789999999999876
No 25
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=88.38 E-value=1.1 Score=31.93 Aligned_cols=52 Identities=21% Similarity=0.303 Sum_probs=35.3
Q ss_pred eCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCcccc-cceeeeccC
Q psy1574 15 QDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLY-NAIVWSDTR 78 (124)
Q Consensus 15 ~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~-p~i~w~D~R 78 (124)
.+++++++.+.+.++++.++ .+|.+|||+..+ ++|.++|.... |.+.|.+..
T Consensus 35 ~~~~~~~~~i~~~i~~~~~~--------~~i~gigi~~pG----~vd~~~g~v~~~~~l~w~~~~ 87 (321)
T 3vgl_A 35 PTAEGIVDAICAAVAGASEG--------HDVEAVGIGAAG----YVDDKRATVLFAPNIDWRHEP 87 (321)
T ss_dssp SSHHHHHHHHHHHHHHHHTT--------CCEEEEEEEESS----EECTTSSCEEECSSSCCEEEC
T ss_pred CCHHHHHHHHHHHHHHHHhh--------cCceEEEEeccc----cEeCCCCEEEeCCCCCCcCCC
Confidence 57999999999999888642 478999998765 56763344332 334565543
No 26
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=87.25 E-value=1.2 Score=27.94 Aligned_cols=36 Identities=22% Similarity=0.397 Sum_probs=31.1
Q ss_pred eCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecc
Q psy1574 15 QDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQ 53 (124)
Q Consensus 15 ~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~ 53 (124)
-+++++++++.+.++++++. -++.+++|.+|-||.+
T Consensus 15 Nt~e~I~~at~eLl~~i~~~---N~l~~~dIvSv~FT~T 50 (127)
T 1dbf_A 15 DTEEEILQKTKQLLEKIIEE---NHTKPEDVVQMLLSAT 50 (127)
T ss_dssp CCHHHHHHHHHHHHHHHHHH---HCCCGGGEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHH---cCCCHHHEEEEEEEeC
Confidence 46889999999999999875 4788999999999976
No 27
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=86.54 E-value=0.72 Score=32.98 Aligned_cols=67 Identities=10% Similarity=0.056 Sum_probs=44.1
Q ss_pred eeCHHHHHHHHHHHHHHHHHHHHhCCCCCC-CeeeEEeecccce----eEEeeCC----CCcccccceeeeccCcHHHH
Q psy1574 14 EQDPMEILQAVQTTMDRAIEKLSAHGLSRD-DIVTLGITNQRET----TVVWDLN----TGEPLYNAIVWSDTRADNIV 83 (124)
Q Consensus 14 e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~-~I~~i~is~~~~~----~v~~d~~----~G~pl~p~i~w~D~R~~~~~ 83 (124)
+++++++++.+.+++++++++ .+...+ +|.+|||+..+.. -+.+.+. -+....|++..+|.++....
T Consensus 42 ~~~~~~~~~~i~~~i~~~~~~---~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a 117 (347)
T 2ch5_A 42 LIGTDKCVERINEMVNRAKRK---AGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIAT 117 (347)
T ss_dssp HHCHHHHHHHHHHHHHHHHHH---HTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHh---cCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHh
Confidence 468899999999999998875 355555 7888988877632 0111110 01111477888888887765
No 28
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=85.60 E-value=2.5 Score=30.13 Aligned_cols=49 Identities=10% Similarity=0.046 Sum_probs=35.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCcccccceeee
Q psy1574 16 DPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYNAIVWS 75 (124)
Q Consensus 16 dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p~i~w~ 75 (124)
+++++++.+.+.++++.++. ..+.+|||+..+ ++|.++|....+.+.|.
T Consensus 59 ~~~~~~~~i~~~i~~~~~~~-------~~~~gigi~~pG----~vd~~~g~v~~~~~~~~ 107 (327)
T 4db3_A 59 DYPLLLETIAGLVAKYDQEF-------ACEGKIGLGLPG----MEDADDATVLTVNVPAA 107 (327)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-------TSCCEEEEEESE----EECTTTCCEEESSSGGG
T ss_pred CHHHHHHHHHHHHHHHHHhc-------CCccEEEEEeec----cEeCCCCEEEcCCCccc
Confidence 78899999999998887642 246788887654 56753577766666663
No 29
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=85.50 E-value=1.7 Score=27.01 Aligned_cols=36 Identities=19% Similarity=0.360 Sum_probs=30.8
Q ss_pred eCHHHHHHHHHHHHHHHHHHHHhCCCCC-CCeeeEEeecc
Q psy1574 15 QDPMEILQAVQTTMDRAIEKLSAHGLSR-DDIVTLGITNQ 53 (124)
Q Consensus 15 ~dp~~~~~~~~~~~~~~~~~~~~~~~~~-~~I~~i~is~~ 53 (124)
-+++++++++.+.++++++. -++.+ ++|.+|-||.+
T Consensus 14 n~~e~I~~at~eLl~~i~~~---N~l~~~~divSv~FT~T 50 (122)
T 1ufy_A 14 DTPEAIHQATRELLLKMLEA---NGIQSYEELAAVIFTVT 50 (122)
T ss_dssp SSHHHHHHHHHHHHHHHHHH---HTCCCGGGEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHh---cCCCChHhEEEEEEEeC
Confidence 36889999999999999875 47888 99999999876
No 30
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=85.17 E-value=1.5 Score=31.37 Aligned_cols=68 Identities=13% Similarity=0.093 Sum_probs=43.7
Q ss_pred eCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccc-----eeEEe------eCCCCccc---------ccceee
Q psy1574 15 QDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRE-----TTVVW------DLNTGEPL---------YNAIVW 74 (124)
Q Consensus 15 ~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~-----~~v~~------d~~~G~pl---------~p~i~w 74 (124)
.+++++++.+.+.+++++++. +....+|.+|||+..+. +.+.. +- ++.++ .|++..
T Consensus 63 ~~~~~~~~~i~~~i~~~~~~~---~~~~~~i~gigi~~pG~vd~~~g~v~~~~~~~~~w-~~~~l~~~l~~~~~~pv~v~ 138 (343)
T 2yhw_A 63 KTYEERINLILQMCVEAAAEA---VKLNCRILGVGISTGGRVNPREGIVLHSTKLIQEW-NSVDLRTPLSDTLHLPVWVD 138 (343)
T ss_dssp SSHHHHHHHHHHHHHHHHHHH---HHTTEEEEEEEEEESSEEETTTTEEEECCTTSSSC-SSEECHHHHHHHHCSCEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhc---ccccCceEEEEEecccCEeCCCCEEEeCCcCCCCC-cCCCHHHHHHHHHCCCEEEe
Confidence 378899999999999987653 22346798999887763 33321 11 12333 366677
Q ss_pred eccCcHHHHHHH
Q psy1574 75 SDTRADNIVDQV 86 (124)
Q Consensus 75 ~D~R~~~~~~~~ 86 (124)
+|.++....+.+
T Consensus 139 NDa~aaal~E~~ 150 (343)
T 2yhw_A 139 NDGNCAALAERK 150 (343)
T ss_dssp EHHHHHHHHHHH
T ss_pred chhHHHHHHHHH
Confidence 777776666544
No 31
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=85.16 E-value=1.9 Score=30.64 Aligned_cols=56 Identities=7% Similarity=0.093 Sum_probs=37.2
Q ss_pred eCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCccccc-cee-eeccCcHH
Q psy1574 15 QDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYN-AIV-WSDTRADN 81 (124)
Q Consensus 15 ~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p-~i~-w~D~R~~~ 81 (124)
.+++++++.+.+.++++++. ..+|.+|||+..+ ++|.++|..+.+ .+. |.+-.-.+
T Consensus 54 ~~~~~~~~~i~~~i~~~~~~-------~~~i~gigi~~pG----~vd~~~g~v~~~~~l~~w~~~~l~~ 111 (321)
T 3r8e_A 54 VNGIGFVESMKLEIGNFLKQ-------YPIVKGVGIGWPG----LVSLDRTKVILLPNIPSVVNVPIVE 111 (321)
T ss_dssp HTTTCHHHHHHHHHHHHHHH-------CTTCCEEEEEESS----EECTTSCCEEEBTTBCCCCSCCHHH
T ss_pred CCHHHHHHHHHHHHHHHHhc-------cCCeeEEEEEecc----cEECCCCEEEeCCCCccccCCCHHH
Confidence 35677889988888887742 3578899988764 567435766543 333 77654443
No 32
>2ov7_A 50S ribosomal protein L1; 2.30A {Thermus thermophilus} PDB: 2oum_A 2vpl_A
Probab=76.12 E-value=4 Score=25.87 Aligned_cols=51 Identities=12% Similarity=0.122 Sum_probs=38.9
Q ss_pred CeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeC
Q psy1574 11 GWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDL 62 (124)
Q Consensus 11 g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~ 62 (124)
|.+..+++++.+.+..++..+.+. +..+.-+..|+.+.++++|.--+.+|.
T Consensus 85 Gk~sf~~e~L~eNi~a~i~~l~~~-kp~~~kg~~ik~v~issTMGp~i~id~ 135 (137)
T 2ov7_A 85 GKASFPPEKLADNIRAFIRALEAH-KPEGAKGTFLRSVYVTTTMGPSVRINP 135 (137)
T ss_dssp EETTSCHHHHHHHHHHHHHHHHTT-SCSSCCSCSEEEEEEEETTSCCEEBCT
T ss_pred ecCCCCHHHHHHHHHHHHHHHHHh-CcccccCceEEEEEEECCCCCCEEecC
Confidence 566789999999999998888753 223333357999999999887777876
No 33
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=75.77 E-value=5.3 Score=27.99 Aligned_cols=35 Identities=26% Similarity=0.355 Sum_probs=26.0
Q ss_pred eCHHHHHHHHHHHHHHHHHHHHhCCCCCCCe--eeEEeec
Q psy1574 15 QDPMEILQAVQTTMDRAIEKLSAHGLSRDDI--VTLGITN 52 (124)
Q Consensus 15 ~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I--~~i~is~ 52 (124)
++++++++.+.+++++++++ .+.+..+| .+|+|+.
T Consensus 47 ~~~~~~~~~l~~~i~~~l~~---~~~~~~~i~~~~igig~ 83 (305)
T 1zc6_A 47 QGIAKSWQAVLSTLEAAFQQ---AGLPAAPASACAIGLGL 83 (305)
T ss_dssp GCHHHHHHHHHHHHHHHHHH---TTCCCCCGGGEEEEEEE
T ss_pred cCHHHHHHHHHHHHHHHHHh---cCCChhhhccceEEEEe
Confidence 67899999999999999875 45666676 4555443
No 34
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=70.43 E-value=3.1 Score=29.45 Aligned_cols=51 Identities=4% Similarity=0.073 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCcccc-cceeeecc
Q psy1574 17 PMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLY-NAIVWSDT 77 (124)
Q Consensus 17 p~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~-p~i~w~D~ 77 (124)
++.+++.+.+.+++++++. ..+|.+|||+..+ ++|.++|..+. |-+.|.+.
T Consensus 43 ~~~~~~~i~~~i~~~~~~~------~~~i~gigi~~pG----~vd~~~g~v~~~~~l~~~~~ 94 (310)
T 3htv_A 43 APGLVSGIGEMIDEQLRRF------NARCHGLVMGFPA----LVSKDKRTIISTPNLPLTAA 94 (310)
T ss_dssp TTCHHHHHHHHHHHHHHHH------TEEEEEEEEEESS----CBCTTSSCBCSCCSSSCCHH
T ss_pred HHHHHHHHHHHHHHHHHhc------CCCeeEEEEeccc----cEeCCCCEEEeCCCCCCccc
Confidence 3456777777777765531 1368889988664 46764466553 44567653
No 35
>1mzp_A 50S ribosomal protein L1P; ribosome, RNA-protein complex; 2.65A {Sulfolobus acidocaldarius} SCOP: e.24.1.1 PDB: 1pnu_5 1pny_5 1vor_7 1vou_7 1vow_7 1voy_7 1vp0_7 3e1b_Z 3e1d_Z
Probab=70.31 E-value=8.7 Score=26.08 Aligned_cols=48 Identities=8% Similarity=0.154 Sum_probs=38.1
Q ss_pred CeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeC
Q psy1574 11 GWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDL 62 (124)
Q Consensus 11 g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~ 62 (124)
|...++++++.+.+..++..+.+.. .- ...|+.|.++++|.--+.+|+
T Consensus 170 G~~~~~~e~L~eNi~a~i~~l~~~~---p~-~~~ik~v~lksTmgp~i~i~~ 217 (217)
T 1mzp_A 170 GTEDMKPEDLAENAIAVLNAIENKA---KV-ETNLRNIYVKTTMGKAVKVKR 217 (217)
T ss_dssp EETTSCHHHHHHHHHHHHHHHHHHC---CC-TTTEEEEEEEETTSCCEECCC
T ss_pred eCCCCCHHHHHHHHHHHHHHHHHhC---cc-chheEEEEEECCCCCCeeCCC
Confidence 5677899999999999999987653 22 378999999998876666653
No 36
>2ftc_A Mitochondrial ribosomal protein L1; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus}
Probab=68.99 E-value=9.5 Score=25.30 Aligned_cols=50 Identities=8% Similarity=0.086 Sum_probs=38.9
Q ss_pred CeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeC
Q psy1574 11 GWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDL 62 (124)
Q Consensus 11 g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~ 62 (124)
|....+++++.+.+..++..+.+.. ..+. ..-|+.+.++++|.--+.+|-
T Consensus 136 G~~~~~~e~L~eNi~a~i~~l~~~~-p~~~-g~~ik~v~lssTmgp~i~i~~ 185 (189)
T 2ftc_A 136 ATLDMSSDQIAANLQAVINEVCRHR-PLNL-GPFVVRAFLRSSTSEGLLLKI 185 (189)
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHhC-chhc-CccEEEEEEECCCCCCEEEeh
Confidence 6778899999999999998887653 2233 467999999999877777764
No 37
>2kyg_C Protein CBFA2T1; protein/protein, homodimer bound to monomer, protein binding; NMR {Homo sapiens}
Probab=67.57 E-value=6.6 Score=18.84 Aligned_cols=26 Identities=19% Similarity=0.458 Sum_probs=19.3
Q ss_pred ccCCCCeeeeCHHHHHHHHHHHHHHHHHH
Q psy1574 6 ISPQEGWAEQDPMEILQAVQTTMDRAIEK 34 (124)
Q Consensus 6 ~~~~~g~~e~dp~~~~~~~~~~~~~~~~~ 34 (124)
+.|.+|++ |+++|+...+++.++..+
T Consensus 5 ~r~gtGYV---p~EiWkKaeeavnevkrQ 30 (38)
T 2kyg_C 5 IGSASGYV---PEEIWKKAEEAVNEVKRQ 30 (38)
T ss_dssp CSCCCSSC---CSHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCC---cHHHHHHHHHHHHHHHHH
Confidence 34666664 789999999988887554
No 38
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=64.87 E-value=14 Score=25.85 Aligned_cols=43 Identities=14% Similarity=0.129 Sum_probs=28.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCccc
Q psy1574 16 DPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPL 68 (124)
Q Consensus 16 dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl 68 (124)
+++++++.+.+.+++++++. ..+|.+|||+..+ ++|.++|...
T Consensus 35 ~~~~~~~~i~~~i~~~~~~~------~~~i~gigi~~pG----~vd~~~g~v~ 77 (302)
T 3vov_A 35 GGERVAEALAEAAERAEREA------GVRGEAIGLGTPG----PLDFRRGVIR 77 (302)
T ss_dssp CHHHHHHHHHHHHHHHHHHH------TCCCSSEEEEESS----CEETTTTEEC
T ss_pred ChHHHHHHHHHHHHHHHhhc------cCCceEEEEEecc----cEeCCCCEEE
Confidence 44788999999998887642 3578888887654 3454335444
No 39
>2wwq_5 50S ribosomal protein L1; ribosomal protein, ribonucleoprotein, nucleotide-binding, protein biosynthesis, translation, zinc-finger; HET: 5MU; 5.80A {Escherichia coli} PDB: 3fik_5 3izt_C* 3izu_C* 3j01_5 3j0t_C* 3j0w_C* 3j0y_C* 3j11_C* 3j12_C* 3j14_C* 3kcr_5 2rdo_9 2gya_2 2gyc_2
Probab=61.01 E-value=13 Score=25.61 Aligned_cols=51 Identities=12% Similarity=0.061 Sum_probs=39.2
Q ss_pred CeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeC
Q psy1574 11 GWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDL 62 (124)
Q Consensus 11 g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~ 62 (124)
|...++++++.+.+..++..+.+.. ..+.....|+.|.++++|.--+.+|.
T Consensus 176 G~~~f~~e~L~eNi~a~i~~l~~~~-p~~~kg~~Ik~v~lksTmgp~i~id~ 226 (234)
T 2wwq_5 176 GKVDFDADKLKENLEALLVALKKAK-PTQAKGVYIKKVSISTTMGAGVAVDQ 226 (234)
T ss_dssp EETTSCHHHHHHHHHHHHHHHHHSC-CSSCCSCCEEEEEEEESSSCEEEESS
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHhC-cccccCCeEEEEEEECCCCCCEEEeh
Confidence 5667899999999999998887532 22322347999999999888888886
No 40
>3u42_A 50S ribosomal protein L1; rossmann fold, rRNA binding, RNA binding; 1.35A {Thermus thermophilus} PDB: 3u56_A 3u4m_A 1eg0_N 1vsp_A 2hgj_C 2hgq_C 2hgu_C 1vsa_A 4f9t_A* 4abs_C 3zvp_C 1zho_A 1ml5_c* 1yl3_C 1giy_C 3umy_A 2hw8_A 2j01_C 2j03_C 2om7_K* ...
Probab=59.26 E-value=14 Score=25.37 Aligned_cols=51 Identities=12% Similarity=0.112 Sum_probs=38.7
Q ss_pred CeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeC
Q psy1574 11 GWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDL 62 (124)
Q Consensus 11 g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~ 62 (124)
|....+++++.+.+...+..+... +..+....-|+.|.++++|.--+-+|.
T Consensus 177 Gk~~f~~e~L~eNi~a~i~~i~~~-kp~~~kg~~ik~v~lssTmGp~i~id~ 227 (229)
T 3u42_A 177 GKASFPPEKLADNIRAFIRALEAH-KPEGAKGTFLRSVYVTTVMGPSVRINP 227 (229)
T ss_dssp EETTSCHHHHHHHHHHHHHHHHHT-CCTTCCSCSEEEEEEECSSSCCEEBCT
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHh-CccccCCCeEEEEEEECCCCcCeEeCC
Confidence 566789999999998888887653 223333445999999999888788876
No 41
>3j21_A 50S ribosomal protein L1P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=55.57 E-value=20 Score=24.27 Aligned_cols=50 Identities=16% Similarity=0.271 Sum_probs=37.2
Q ss_pred CCCeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEee
Q psy1574 9 QEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWD 61 (124)
Q Consensus 9 ~~g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d 61 (124)
.=|...++++++.+.+..++..+.+.+ ..+ ...|+.|.++|+|.=-+.+|
T Consensus 166 ~VG~~~~~~e~L~eNi~a~i~~l~~~~-p~~--~k~Iksi~lksTmgp~i~i~ 215 (216)
T 3j21_A 166 PVGTEKMSDEEIAENIEAVLNAIIGKL-ERG--ESQVKSVYVKTTMGPAVKIE 215 (216)
T ss_dssp CCEESSSCHHHHHHHHHHHHHHHHHSC-CCS--SCSEEEEEEEESSSCCEECC
T ss_pred EecCCCCCHHHHHHHHHHHHHHHHHhc-ccc--ccceEEEEEECCCCCCEEcc
Confidence 346777899999999999999887642 122 24899999999876555553
No 42
>2zkr_5 60S ribosomal protein L10A; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=54.80 E-value=16 Score=24.68 Aligned_cols=47 Identities=15% Similarity=0.175 Sum_probs=35.4
Q ss_pred CeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEe
Q psy1574 11 GWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVW 60 (124)
Q Consensus 11 g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~ 60 (124)
|...++++++.+.+..++..+.+.+ ..+ ...|+.|.++++|.--+.+
T Consensus 165 G~~~~~~e~L~eNi~a~i~~l~~~~-p~~--~~~ik~v~lksTmgp~i~i 211 (212)
T 2zkr_5 165 GAEDMSAENIADNIDVILRRLHADL-EKG--PLNIDTVYVKTTMGPAMEV 211 (212)
T ss_dssp EETTSCHHHHHHHHHHHHHHHHTTT-CCC--TTTEEEEEEEESSSCCEEC
T ss_pred eCCCCCHHHHHHHHHHHHHHHHHhC-ccc--cccEEEEEEECCCCCCEEC
Confidence 5677899999999999998887642 122 2689999999987654443
No 43
>3qoy_A 50S ribosomal protein L1; beta-alpha-beta, structural constituent of ribosome, rRNA BI regulation of translation, translation, ribosomal RNA; 2.10A {Aquifex aeolicus}
Probab=52.07 E-value=20 Score=24.80 Aligned_cols=51 Identities=12% Similarity=0.227 Sum_probs=37.9
Q ss_pred CeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeC
Q psy1574 11 GWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDL 62 (124)
Q Consensus 11 g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~ 62 (124)
|...++++++.+.+..++..+.+.. ..+.....|+.|.++++|.--+.+|-
T Consensus 180 G~~~m~~e~L~eNi~a~i~~l~~~~-p~~~kg~~Ik~v~lkSTmGp~i~i~~ 230 (242)
T 3qoy_A 180 GKISFEKEKLIDNLYAAIDAVVRAK-PPGAKGQYIKNMAVSLTMSPSVKLDI 230 (242)
T ss_dssp EETTSCHHHHHHHHHHHHHHHHHTC-CTTCCSCSEEEEEEEETTSCCEEBCH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHhC-CcccCCceEEEEEEECCCCCCEEEEh
Confidence 5566789999999999998887642 22223457999999999876677753
No 44
>1v8d_A Hypothetical protein (TT1679); X-RAY craytallography, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.16A {Thermus thermophilus} SCOP: c.140.1.1
Probab=51.25 E-value=31 Score=23.61 Aligned_cols=42 Identities=12% Similarity=0.096 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeC
Q psy1574 18 MEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDL 62 (124)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~ 62 (124)
+++-+.+.+++.+++++ +++.+.+|-.||+|+.-..---+.+
T Consensus 41 ~~i~~~~~~~l~Ell~~---a~l~~G~ifVvGcSTSEV~G~~IGt 82 (235)
T 1v8d_A 41 EGIRRAAQRAAEEFLQA---FPMAPGSLFVLGGSTSEVLGERVGT 82 (235)
T ss_dssp HHHHHHHHHHHHHHHHH---SCCCTTCEEEEEECHHHHHC----C
T ss_pred HHHHHHHHHHHHHHHHh---cCCCCCCEEEEeeeHHHhCCccCCC
Confidence 46888888999998876 6788889999999986433334444
No 45
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=47.37 E-value=9.1 Score=26.51 Aligned_cols=33 Identities=6% Similarity=0.075 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeE
Q psy1574 22 QAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTV 58 (124)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v 58 (124)
+++.++++++.+ .++...+|.+|++||++..++
T Consensus 40 ~~~~~~l~~l~~----~~~~~~~i~~i~~TG~g~~~~ 72 (270)
T 1hux_A 40 GPARSISEVLEN----AHMKKEDMAFTLATGYGRNSL 72 (270)
T ss_dssp HHHHHHHHHHHH----HTCCGGGCSEEEEESTTTTTT
T ss_pred HHHHHHHHHHHH----cCCChhHEEEEEEeCccccch
Confidence 455566666643 245567889999999887654
No 46
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=47.21 E-value=25 Score=25.95 Aligned_cols=30 Identities=13% Similarity=0.279 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecc
Q psy1574 21 LQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQ 53 (124)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~ 53 (124)
=+.+.+++++++++ .++++++|.+||.-||
T Consensus 67 g~~~a~av~~~l~~---~~~~~~~Id~IGsHGQ 96 (371)
T 3qbx_A 67 VALAAQGVRELLLQ---QQMSPDEVRAIGSHGQ 96 (371)
T ss_dssp HHHHHHHHHHHHHH---TTCCGGGCCEEEECCE
T ss_pred HHHHHHHHHHHHHH---cCCCcccccEEEeCCc
Confidence 34445556666554 7888999999988776
No 47
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=45.28 E-value=32 Score=20.22 Aligned_cols=77 Identities=10% Similarity=0.164 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCccccc-ceeeeccCcHHHHHHHHhhCCCCch
Q psy1574 17 PMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYN-AIVWSDTRADNIVDQVLAKFPDQDK 95 (124)
Q Consensus 17 p~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p-~i~w~D~R~~~~~~~~~~~~~~~~~ 95 (124)
...+-+.+.+++.+++. .+.+ -..|.+.. ...+.++. +-.|..= -|.....|+.++.+++.+.+ .
T Consensus 16 ~~~l~~~~~~~l~~~lg------kP~~-~~~v~~~~--~~~~~~~g-~~~~~~~v~i~~~~g~~~eqk~~l~~~i----~ 81 (115)
T 1uiz_A 16 PDTLLSDLTKQLAKATG------KPAE-YIAIHIVP--DQIMSFGD-STDPCAVCSLCSIGKIGGPQNKSYTKLL----C 81 (115)
T ss_dssp CTTHHHHHHHHHHHHHT------CCGG-GCEEEEEC--SCEEEETT-BCSSCEEEEEEESSCCSHHHHHHHHHHH----H
T ss_pred HHHHHHHHHHHHHHHHC------cChh-HEEEEEEC--CcceEECC-CCCCeEEEEEEEecCCCHHHHHHHHHHH----H
Confidence 66677777777777664 3444 33455543 44455544 2333321 12345678888888887765 3
Q ss_pred hhhhhhhCCCCC
Q psy1574 96 DYLKPICGLPVS 107 (124)
Q Consensus 96 ~~~~~~tG~~~~ 107 (124)
+.+.+..|.++.
T Consensus 82 ~~l~~~lgi~~~ 93 (115)
T 1uiz_A 82 DILTKQLNIPAN 93 (115)
T ss_dssp HHHHHHHCCCGG
T ss_pred HHHHHHhCcCcc
Confidence 566667787654
No 48
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=45.22 E-value=26 Score=25.80 Aligned_cols=35 Identities=17% Similarity=0.347 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEE
Q psy1574 20 ILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVV 59 (124)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~ 59 (124)
+=+.+.+++++++++ .++++++|.+||.-|| ++.-
T Consensus 70 lg~~~a~av~~~l~~---~~~~~~~i~~IGsHGQ--Tv~H 104 (370)
T 3cqy_A 70 VGKLFALAVNNLLAK---TKIAKDEIIAIGSHGQ--TVRH 104 (370)
T ss_dssp HHHHHHHHHHHHHHH---HCCCGGGEEEEEEEEE--EEEE
T ss_pred HHHHHHHHHHHHHHH---cCCCcccccEEEeCCc--cccc
Confidence 344455666666654 6888899999998887 4444
No 49
>1i2a_A 50S ribosomal protein L1P; primary rRNA-binding protein, translation repressor, ribosome; 1.85A {Methanocaldococcus jannaschii} SCOP: e.24.1.1 PDB: 1cjs_A 1u63_A 1dwu_A
Probab=42.53 E-value=37 Score=22.95 Aligned_cols=45 Identities=13% Similarity=0.167 Sum_probs=34.0
Q ss_pred CeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeE
Q psy1574 11 GWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTV 58 (124)
Q Consensus 11 g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v 58 (124)
|...++++++.+.+..++..+.+.+ ..+ ...|+.|.++++|.--+
T Consensus 165 G~~~~~~e~L~eNi~a~i~~l~~~~-p~~--~~~ik~v~lksTmgp~i 209 (219)
T 1i2a_A 165 GNEKMTDEQIVDNIEAVLNVVAKKY-EKG--LYHIKDAYVKLTMGPAV 209 (219)
T ss_dssp EETTSCHHHHHHHHHHHHHHHHHHS-TTG--GGGEEEEEEEETTSCCE
T ss_pred ecCCCCHHHHHHHHHHHHHHHHHhC-Ccc--ccceEEEEEECCCCCCE
Confidence 5677899999999999999987653 122 25799999998764433
No 50
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=40.86 E-value=35 Score=24.00 Aligned_cols=12 Identities=17% Similarity=0.313 Sum_probs=10.5
Q ss_pred CCeeeEEeeccc
Q psy1574 43 DDIVTLGITNQR 54 (124)
Q Consensus 43 ~~I~~i~is~~~ 54 (124)
..|++||||++.
T Consensus 144 Gkir~iGvSn~~ 155 (298)
T 1vp5_A 144 GLVRAIGVSNFY 155 (298)
T ss_dssp TSEEEEEEESCC
T ss_pred CCccEEEecCCC
Confidence 489999999985
No 51
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=40.83 E-value=21 Score=24.60 Aligned_cols=68 Identities=9% Similarity=0.115 Sum_probs=40.3
Q ss_pred CCeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeeccc--ceeEEeeCCCCccc-ccceeeeccCcHHHHHH
Q psy1574 10 EGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQR--ETTVVWDLNTGEPL-YNAIVWSDTRADNIVDQ 85 (124)
Q Consensus 10 ~g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~--~~~v~~d~~~G~pl-~p~i~w~D~R~~~~~~~ 85 (124)
+++.+++++++++.+.+++++++++ . . ...+||+.|.. .+.+.+.+ ..+.+ .|++.++|.++....+.
T Consensus 34 ~~~~~~~~~~~~~~i~~~i~~~~~~----~--~-~~igi~~~G~~~~~~~~~l~~-~l~~~~~pv~v~ND~~aaa~~e~ 104 (299)
T 2e2o_A 34 GNYHNVGLTRAIENIKEAVKIAAKG----E--A-DVVGMGVAGLDSKFDWENFTP-LASLIAPKVIIQHDGVIALFAET 104 (299)
T ss_dssp CCHHHHCHHHHHHHHHHHHHHHHTS----C--C-SEEEEEETTCCSHHHHHHHHH-HHTTSSSEEEEEEHHHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhc----C--C-CEEEEEcCCCCchhHHHHHHH-HHHhCCCCEEEeCcHHHHHhhcc
Confidence 3344578999999999999887642 1 1 22344555541 12223332 12212 47889999998876654
No 52
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=40.09 E-value=39 Score=23.74 Aligned_cols=13 Identities=23% Similarity=0.455 Sum_probs=10.8
Q ss_pred CCeeeEEeecccc
Q psy1574 43 DDIVTLGITNQRE 55 (124)
Q Consensus 43 ~~I~~i~is~~~~ 55 (124)
..|+.||+|++..
T Consensus 150 Gkir~iGvSn~~~ 162 (298)
T 3up8_A 150 GKVRHIGISNFNT 162 (298)
T ss_dssp TSEEEEEEESCCH
T ss_pred CCccEEEEcCCCH
Confidence 4899999999753
No 53
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=35.67 E-value=47 Score=22.92 Aligned_cols=12 Identities=17% Similarity=0.329 Sum_probs=10.4
Q ss_pred CCeeeEEeeccc
Q psy1574 43 DDIVTLGITNQR 54 (124)
Q Consensus 43 ~~I~~i~is~~~ 54 (124)
..|++||+|++.
T Consensus 131 Gkir~iGvSn~~ 142 (278)
T 1hw6_A 131 GLTRSIGVSNHL 142 (278)
T ss_dssp TSEEEEEEESCC
T ss_pred CCccEEEecCCC
Confidence 489999999975
No 54
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=34.42 E-value=46 Score=22.48 Aligned_cols=28 Identities=18% Similarity=0.288 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCeeeEEeec
Q psy1574 22 QAVQTTMDRAIEKLSAHGLSRDDIVTLGITN 52 (124)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~ 52 (124)
+.+...+++++++ +|+...+|.+|+++.
T Consensus 36 ~~l~~~i~~~L~~---a~~~~~did~Iav~~ 63 (231)
T 2gel_A 36 QRILPMVQEILAA---SGASLNEIDALAFGR 63 (231)
T ss_dssp HHHHHHHHHHHHH---TTCCGGGCSEEEEEC
T ss_pred HHHHHHHHHHHHH---cCCCHHHCCEEEEEc
Confidence 3455666666654 678888888888753
No 55
>3bbo_D Ribosomal protein L1; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=34.39 E-value=31 Score=25.30 Aligned_cols=53 Identities=9% Similarity=0.065 Sum_probs=39.2
Q ss_pred CCCeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeC
Q psy1574 9 QEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDL 62 (124)
Q Consensus 9 ~~g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~ 62 (124)
.=|....+++++.+.+..++..+.+.. ..+.....|+.|.|+++|.--+.+|.
T Consensus 288 ~VGk~sfs~EqL~ENI~Avi~~L~k~k-P~~~KG~yIksv~LkSTMGPgi~I~~ 340 (352)
T 3bbo_D 288 PFGKLNFEEEDLLINLFATIKSVETNK-PTGAKGVYWKSAHISSSMGPSIRLNI 340 (352)
T ss_dssp CCEETTSCHHHHHHHHHHHHHHHHTTC-CTTCCSCSEEEEECCBSSSCCCEECT
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHHHhC-cccccCceEEEEEEECCCCCCEEEEh
Confidence 346777899999999999998886532 22322347999999998877777775
No 56
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=34.30 E-value=55 Score=22.99 Aligned_cols=12 Identities=8% Similarity=0.008 Sum_probs=10.3
Q ss_pred CCeeeEEeeccc
Q psy1574 43 DDIVTLGITNQR 54 (124)
Q Consensus 43 ~~I~~i~is~~~ 54 (124)
..|+.||+|++.
T Consensus 146 Gkir~iGvSn~~ 157 (327)
T 3eau_A 146 GMAMYWGTSRWS 157 (327)
T ss_dssp TSEEEEEEESCC
T ss_pred CCeeEEeecCCC
Confidence 489999999875
No 57
>3gqe_A Non-structural protein 3; macro domain, X domain, venezuelan equine encephalitis virus alphavirus; HET: BCN; 2.30A {Venezuelan equine encephalitis virus} PDB: 3gqo_A*
Probab=34.23 E-value=53 Score=21.20 Aligned_cols=36 Identities=3% Similarity=0.040 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeC
Q psy1574 22 QAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDL 62 (124)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~ 62 (124)
+.|..|.+.+++... ...++.|++...+.|+.-++.
T Consensus 85 ~~L~~~y~~~L~~a~-----~~~~~SIAfP~IstG~~g~p~ 120 (168)
T 3gqe_A 85 KQLAEAYESIAKIVN-----DNNYKSVAIPLLSTGIFSGNK 120 (168)
T ss_dssp HHHHHHHHHHHHHHH-----HTTCSEEEEECTTSSTTSCSS
T ss_pred HHHHHHHHHHHHHHH-----HcCCCEEEECCcccCCCCCCH
Confidence 345555555554332 247889999999888766655
No 58
>2vhf_A Ubiquitin carboxyl-terminal hydrolase CYLD; cytokine signalling, linkage specificity, deubiquitinating enzyme, Lys63- linked, anti-oncogene; 2.8A {Homo sapiens}
Probab=34.21 E-value=9.1 Score=28.32 Aligned_cols=20 Identities=30% Similarity=0.356 Sum_probs=13.9
Q ss_pred CeeeeCHHHHHHHHHHHHHH
Q psy1574 11 GWAEQDPMEILQAVQTTMDR 30 (124)
Q Consensus 11 g~~e~dp~~~~~~~~~~~~~ 30 (124)
++.||||+|.|..+...+++
T Consensus 94 ~~~QQDaEE~~t~Ll~~L~~ 113 (374)
T 2vhf_A 94 TSEEKDPEEFLNILFHHILR 113 (374)
T ss_dssp ---CCCHHHHHHHHHTTTTC
T ss_pred CccccCHHHHHHHHHHHHhh
Confidence 68999999999998766543
No 59
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=33.40 E-value=50 Score=23.12 Aligned_cols=12 Identities=25% Similarity=0.407 Sum_probs=10.4
Q ss_pred CCeeeEEeeccc
Q psy1574 43 DDIVTLGITNQR 54 (124)
Q Consensus 43 ~~I~~i~is~~~ 54 (124)
..|+.||||++.
T Consensus 151 Gkir~iGvSn~~ 162 (296)
T 1mzr_A 151 GLIKSIGVCNFQ 162 (296)
T ss_dssp TSEEEEEEESCC
T ss_pred CCcCEEEEeCCC
Confidence 489999999975
No 60
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=33.29 E-value=55 Score=23.38 Aligned_cols=12 Identities=33% Similarity=0.540 Sum_probs=10.3
Q ss_pred CCeeeEEeeccc
Q psy1574 43 DDIVTLGITNQR 54 (124)
Q Consensus 43 ~~I~~i~is~~~ 54 (124)
..|+.||+|++.
T Consensus 168 Gkir~iGvSn~~ 179 (348)
T 3n2t_A 168 GKIRALGVSNFS 179 (348)
T ss_dssp TSEEEEEEESCC
T ss_pred CcceEEecCCCC
Confidence 489999999974
No 61
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=32.74 E-value=57 Score=22.45 Aligned_cols=12 Identities=25% Similarity=0.554 Sum_probs=10.4
Q ss_pred CCeeeEEeeccc
Q psy1574 43 DDIVTLGITNQR 54 (124)
Q Consensus 43 ~~I~~i~is~~~ 54 (124)
..|+.||+|++.
T Consensus 133 Gkir~iGvSn~~ 144 (276)
T 3f7j_A 133 GKIRAIGVSNFQ 144 (276)
T ss_dssp TSEEEEEEESCC
T ss_pred CCccEEEeccCC
Confidence 489999999975
No 62
>2aal_A Malonate semialdehyde decarboxylase; tautomerase superfamily, beta-alpha-beta, homotrimeric, LYAS; 1.65A {Pseudomonas pavonaceae} SCOP: d.80.1.6 PDB: 2aag_A 2aaj_A
Probab=31.37 E-value=87 Score=18.76 Aligned_cols=29 Identities=17% Similarity=0.239 Sum_probs=20.1
Q ss_pred eccCcHHHHHHHHhhCCCCchhhhhhhhCCCCC
Q psy1574 75 SDTRADNIVDQVLAKFPDQDKDYLKPICGLPVS 107 (124)
Q Consensus 75 ~D~R~~~~~~~~~~~~~~~~~~~~~~~tG~~~~ 107 (124)
.-.|+.++.+++.+.+ .+.+.+..|.+..
T Consensus 73 ~~grt~eqK~~l~~~l----~~~l~~~lg~~~~ 101 (131)
T 2aal_A 73 SRPRSEEQKVCFYKLL----TGALERDCGISPD 101 (131)
T ss_dssp ESCCCHHHHHHHHHHH----HHHHHHHHCCCGG
T ss_pred eCCCCHHHHHHHHHHH----HHHHHHHhCcCcc
Confidence 6678888888887765 3556666776543
No 63
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=31.35 E-value=63 Score=22.93 Aligned_cols=13 Identities=15% Similarity=0.312 Sum_probs=10.9
Q ss_pred CCeeeEEeecccc
Q psy1574 43 DDIVTLGITNQRE 55 (124)
Q Consensus 43 ~~I~~i~is~~~~ 55 (124)
..|+.||||++..
T Consensus 160 Gkir~iGvSn~~~ 172 (346)
T 3n6q_A 160 GKALYVGISSYSP 172 (346)
T ss_dssp TSEEEEEEESCCH
T ss_pred CCeeEEEeCCCCH
Confidence 4899999999754
No 64
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=31.09 E-value=68 Score=25.40 Aligned_cols=45 Identities=20% Similarity=0.310 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHHHH-HhCCCCCCCeeeEEeec---ccceeEEeeC
Q psy1574 18 MEILQAVQTTMDRAIEKL-SAHGLSRDDIVTLGITN---QRETTVVWDL 62 (124)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~I~~i~is~---~~~~~v~~d~ 62 (124)
+.+-+++.+.+.++++++ +++|+++++|..+.|+| |.|=++-+|.
T Consensus 262 ~~L~~~v~~~in~li~~l~~~~~i~~~~I~~~~v~GNt~M~hLllgi~p 310 (631)
T 3zyy_X 262 EKLRKAVLSTINELIFQLCKEHGVEKKEIMAAVVAGNTTMTHLFLEIDP 310 (631)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHeeEEEEEccHHHHHHHcCCCh
Confidence 456666777777777666 34689999998888877 3343444554
No 65
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=30.85 E-value=53 Score=22.04 Aligned_cols=26 Identities=23% Similarity=0.418 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCeeeEEee
Q psy1574 23 AVQTTMDRAIEKLSAHGLSRDDIVTLGIT 51 (124)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~I~~i~is 51 (124)
.+...+++++++ +|+...+|.+|+++
T Consensus 38 ~L~p~i~~~L~~---a~~~~~dld~Iav~ 63 (213)
T 3r6m_A 38 KVLPMVDEVLKE---AGLTLQDLDALAFG 63 (213)
T ss_dssp HHHHHHHHHHHT---TTCCTTTCSEEEEE
T ss_pred HHHHHHHHHHHH---cCCCHHHccEEEEe
Confidence 444556666653 57777777777754
No 66
>3iz5_A 60S ribosomal protein L1 (L1P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_A
Probab=30.43 E-value=40 Score=22.70 Aligned_cols=43 Identities=16% Similarity=0.190 Sum_probs=32.2
Q ss_pred CeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccce
Q psy1574 11 GWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRET 56 (124)
Q Consensus 11 g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~ 56 (124)
|...++++++.+.+..++..+.+.+. --...|+.|.++++|.-
T Consensus 169 G~~~~~~e~L~eNi~avi~~l~~~~p---~~~~~Iksv~iksTmgp 211 (216)
T 3iz5_A 169 GNLSMDEKQIQQNIQMSVNFLVSLLK---KNWQNVRCLYVKSTMGK 211 (216)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHCCSS---CCSCSCSEEEECCSSCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHhcc---CCCceEEEEEEECCCCC
Confidence 56668899999999999888875431 12457999999988643
No 67
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=30.42 E-value=45 Score=23.11 Aligned_cols=13 Identities=23% Similarity=0.567 Sum_probs=10.8
Q ss_pred CCeeeEEeecccc
Q psy1574 43 DDIVTLGITNQRE 55 (124)
Q Consensus 43 ~~I~~i~is~~~~ 55 (124)
..|++||+|++..
T Consensus 136 Gkir~iGvSn~~~ 148 (281)
T 1vbj_A 136 KKVRAIGVSNFHE 148 (281)
T ss_dssp TSBSCEEEESCCH
T ss_pred CCccEEEeeCCCH
Confidence 4899999999763
No 68
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=29.32 E-value=71 Score=22.53 Aligned_cols=12 Identities=25% Similarity=0.554 Sum_probs=10.3
Q ss_pred CCeeeEEeeccc
Q psy1574 43 DDIVTLGITNQR 54 (124)
Q Consensus 43 ~~I~~i~is~~~ 54 (124)
..|+.||+|++.
T Consensus 167 Gkir~iGvSn~~ 178 (310)
T 3b3e_A 167 GKIRAIGVSNFQ 178 (310)
T ss_dssp TSEEEEEEESCC
T ss_pred CCcceEeecCCC
Confidence 489999999975
No 69
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=28.95 E-value=53 Score=23.29 Aligned_cols=27 Identities=22% Similarity=0.469 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCeeeEEee
Q psy1574 22 QAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 51 (124)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~I~~i~is 51 (124)
+.+..++++++++ +|++.++|.+|+++
T Consensus 49 ~~l~~~i~~~L~~---agi~~~did~Ia~~ 75 (330)
T 2ivn_A 49 RLMKPLLRKALSE---AGVSLDDIDVIAFS 75 (330)
T ss_dssp HHHHHHHHHHHHH---HTCCTTTCCEEEEE
T ss_pred HHHHHHHHHHHHH---cCCCHHHCcEEEEE
Confidence 4455566666664 58888999999886
No 70
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=28.94 E-value=75 Score=22.31 Aligned_cols=12 Identities=33% Similarity=0.553 Sum_probs=10.4
Q ss_pred CCeeeEEeeccc
Q psy1574 43 DDIVTLGITNQR 54 (124)
Q Consensus 43 ~~I~~i~is~~~ 54 (124)
..|+.||+|++.
T Consensus 131 Gkir~iGvSn~~ 142 (327)
T 1gve_A 131 GKFVELGLSNYV 142 (327)
T ss_dssp TSEEEEEEESCC
T ss_pred CceeEEEecCCC
Confidence 589999999975
No 71
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=28.88 E-value=73 Score=22.87 Aligned_cols=12 Identities=8% Similarity=0.008 Sum_probs=10.3
Q ss_pred CCeeeEEeeccc
Q psy1574 43 DDIVTLGITNQR 54 (124)
Q Consensus 43 ~~I~~i~is~~~ 54 (124)
..|+.||+|.+.
T Consensus 180 Gkir~iGvSn~~ 191 (367)
T 3lut_A 180 GMAMYWGTSRWS 191 (367)
T ss_dssp TSEEEEEEESCC
T ss_pred CCeeEEEecCCC
Confidence 489999999875
No 72
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=28.49 E-value=48 Score=23.69 Aligned_cols=29 Identities=31% Similarity=0.475 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCeeeEEeec
Q psy1574 21 LQAVQTTMDRAIEKLSAHGLSRDDIVTLGITN 52 (124)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~ 52 (124)
.+.+..++++++++ +|+..++|.+|+++.
T Consensus 53 ~~~l~~~i~~~L~~---ag~~~~did~Iav~~ 81 (334)
T 3eno_A 53 SEVIDTVISRALEK---AKISIHDIDLIGFSM 81 (334)
T ss_dssp HHHHHHHHHHHHHH---HTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHHH---cCCCHHHCCEEEEEc
Confidence 34556666676664 588899999999874
No 73
>3gud_A NECK appendage protein; 3-helix bundle, chaperon, chaperone; HET: PEG; 2.20A {Bacillus phage ga-1}
Probab=28.35 E-value=46 Score=20.74 Aligned_cols=35 Identities=23% Similarity=0.201 Sum_probs=25.9
Q ss_pred hCCCCCCCeeeEEeecccceeEEeeCCCCcccccce
Q psy1574 37 AHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYNAI 72 (124)
Q Consensus 37 ~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p~i 72 (124)
..|+++.+-..|+.+.+-...-.+|+ +|+++.+++
T Consensus 58 ~~GLd~~~yg~ic~D~w~~~~~~~de-dGn~i~~~~ 92 (129)
T 3gud_A 58 DEGLSAFDYGLVGYDEWEATEDEYDS-EGNLVEKGR 92 (129)
T ss_dssp HTTCCGGGGTSEEEEECCCCCCEECS-SSCEEECCC
T ss_pred HcCCCHHHeeeEEeccccccccccCC-CCCeeeecc
Confidence 36888888888888877665566788 598876433
No 74
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=28.26 E-value=65 Score=22.56 Aligned_cols=29 Identities=10% Similarity=0.308 Sum_probs=18.7
Q ss_pred eCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccc
Q psy1574 15 QDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRE 55 (124)
Q Consensus 15 ~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~ 55 (124)
.+.++.|+++.++ .+ . ..|+.||+|++..
T Consensus 136 ~~~~e~~~al~~l----~~----~----Gkir~iGvSn~~~ 164 (316)
T 3o3r_A 136 STFLDAWEGMEEL----VD----Q----GLVKALGVSNFNH 164 (316)
T ss_dssp CCHHHHHHHHHHH----HH----T----TSEEEEEEESCCH
T ss_pred ccHHHHHHHHHHH----HH----c----CCCcEEEEecCCH
Confidence 3455666665443 33 2 4899999999754
No 75
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=28.20 E-value=62 Score=22.74 Aligned_cols=30 Identities=10% Similarity=0.238 Sum_probs=19.7
Q ss_pred eCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccce
Q psy1574 15 QDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRET 56 (124)
Q Consensus 15 ~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~ 56 (124)
.+.++.|+++.++ .+ . ..|++||||++...
T Consensus 143 ~~~~e~~~al~~l----~~----~----Gkir~iGvSn~~~~ 172 (324)
T 3ln3_A 143 VDFCDTWERLEEC----XD----A----GLVXSIGVSNFNHR 172 (324)
T ss_dssp CCHHHHHHHHHHH----HH----T----TSEEEEEEESCCHH
T ss_pred CCHHHHHHHHHHH----Hh----c----CCeeEEEecCCcHH
Confidence 3456777765444 33 2 48999999997543
No 76
>2dx6_A Hypothetical protein TTHA0132; conserved hypothetical protein, structural genomics, NPPSFA; 1.78A {Thermus thermophilus} PDB: 3v45_A
Probab=28.07 E-value=40 Score=21.24 Aligned_cols=37 Identities=11% Similarity=0.093 Sum_probs=23.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEee
Q psy1574 16 DPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWD 61 (124)
Q Consensus 16 dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d 61 (124)
+.+.+.+++..+++.+.+ ..++.|++...+.|+.-++
T Consensus 85 ~~~~L~~~~~~~L~~a~~---------~~~~sIa~P~igtG~~g~p 121 (159)
T 2dx6_A 85 SLETVRKATKSALEKAVE---------LGLKTVAFPLLGTGVGGLP 121 (159)
T ss_dssp CHHHHHHHHHHHHHHHHH---------TTCSEEEECCTTSSTTCCC
T ss_pred hHHHHHHHHHHHHHHHHH---------cCCcEEEECCccCCCCCCC
Confidence 455555555555554432 4678899998887765444
No 77
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=27.94 E-value=78 Score=22.69 Aligned_cols=13 Identities=31% Similarity=0.552 Sum_probs=10.8
Q ss_pred CCeeeEEeecccc
Q psy1574 43 DDIVTLGITNQRE 55 (124)
Q Consensus 43 ~~I~~i~is~~~~ 55 (124)
..|+.||||++..
T Consensus 164 Gkir~iGvSn~~~ 176 (360)
T 2bp1_A 164 GKFVELGLSNYAS 176 (360)
T ss_dssp TSEEEEEEESCCH
T ss_pred CCccEEEEeCCCH
Confidence 5899999998753
No 78
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=27.72 E-value=46 Score=23.10 Aligned_cols=12 Identities=17% Similarity=0.202 Sum_probs=10.5
Q ss_pred CCeeeEEeeccc
Q psy1574 43 DDIVTLGITNQR 54 (124)
Q Consensus 43 ~~I~~i~is~~~ 54 (124)
..|+.||+|++.
T Consensus 139 Gkir~iGvSn~~ 150 (283)
T 2wzm_A 139 GIARSIGVCNFG 150 (283)
T ss_dssp TSEEEEEEESCC
T ss_pred CCccEEEEcCCC
Confidence 489999999985
No 79
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=27.69 E-value=44 Score=22.45 Aligned_cols=28 Identities=11% Similarity=0.309 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCeeeEEeec
Q psy1574 22 QAVQTTMDRAIEKLSAHGLSRDDIVTLGITN 52 (124)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~ 52 (124)
+.+...+++++++ +|+...+|.+|+++.
T Consensus 47 e~L~p~i~~~L~~---a~~~~~dld~Iav~~ 74 (218)
T 2a6a_A 47 EILPVVVKKLLDE---LDLKVKDLDVVGVGI 74 (218)
T ss_dssp GHHHHHHHHHHHH---HTCCGGGCSEEEEEC
T ss_pred HHHHHHHHHHHHH---cCCCHHHCCEEEEEc
Confidence 4455556666554 466677777776543
No 80
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=27.29 E-value=70 Score=22.53 Aligned_cols=13 Identities=15% Similarity=0.388 Sum_probs=10.7
Q ss_pred CCeeeEEeecccc
Q psy1574 43 DDIVTLGITNQRE 55 (124)
Q Consensus 43 ~~I~~i~is~~~~ 55 (124)
..|+.||+|++..
T Consensus 171 Gkir~iGvSn~~~ 183 (319)
T 1ur3_M 171 GKVRHFGVSNFTP 183 (319)
T ss_dssp TSBCCEEEESCCH
T ss_pred CCccEEEecCCCH
Confidence 4899999998754
No 81
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=27.17 E-value=80 Score=22.53 Aligned_cols=12 Identities=25% Similarity=0.412 Sum_probs=10.3
Q ss_pred CCeeeEEeeccc
Q psy1574 43 DDIVTLGITNQR 54 (124)
Q Consensus 43 ~~I~~i~is~~~ 54 (124)
..|+.||||++.
T Consensus 181 Gkir~iGvSn~~ 192 (353)
T 3erp_A 181 GKALYVGISNYP 192 (353)
T ss_dssp TSEEEEEEESCC
T ss_pred CCccEEEecCCC
Confidence 489999999974
No 82
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=27.07 E-value=67 Score=22.39 Aligned_cols=12 Identities=25% Similarity=0.531 Sum_probs=10.3
Q ss_pred CCeeeEEeeccc
Q psy1574 43 DDIVTLGITNQR 54 (124)
Q Consensus 43 ~~I~~i~is~~~ 54 (124)
..|+.||+|++.
T Consensus 147 Gkir~iGvSn~~ 158 (312)
T 1pyf_A 147 GKIRSIGVSNFS 158 (312)
T ss_dssp TSBSCEEEESCC
T ss_pred CCcCEEEecCCC
Confidence 489999999875
No 83
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=26.73 E-value=87 Score=22.19 Aligned_cols=28 Identities=14% Similarity=0.272 Sum_probs=18.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccc
Q psy1574 16 DPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRE 55 (124)
Q Consensus 16 dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~ 55 (124)
+.++.|+++.++ .++ ..|+.||||++..
T Consensus 153 ~~~e~~~al~~l----~~~--------Gkir~iGvSn~~~ 180 (334)
T 3krb_A 153 PLADTWRAMEQL----VEE--------GLVKHIGVSNYTV 180 (334)
T ss_dssp CHHHHHHHHHHH----HHH--------TSEEEEEEESCCH
T ss_pred CHHHHHHHHHHH----HHc--------CCccEEEEecCCH
Confidence 455666665444 332 4899999999753
No 84
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=26.35 E-value=66 Score=22.76 Aligned_cols=12 Identities=25% Similarity=0.507 Sum_probs=10.3
Q ss_pred CCeeeEEeeccc
Q psy1574 43 DDIVTLGITNQR 54 (124)
Q Consensus 43 ~~I~~i~is~~~ 54 (124)
..|+.||+|++.
T Consensus 147 Gkir~iGvSn~~ 158 (333)
T 1pz1_A 147 GKIRAIGVSNFS 158 (333)
T ss_dssp TSBSCEEECSCC
T ss_pred CcCCEEEecCCC
Confidence 489999999975
No 85
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=26.24 E-value=86 Score=22.18 Aligned_cols=13 Identities=15% Similarity=0.402 Sum_probs=10.6
Q ss_pred CCeeeEEeecccc
Q psy1574 43 DDIVTLGITNQRE 55 (124)
Q Consensus 43 ~~I~~i~is~~~~ 55 (124)
..|+.||+|++..
T Consensus 148 Gkir~iGvSn~~~ 160 (337)
T 3v0s_A 148 GKIXYVGLSEASP 160 (337)
T ss_dssp TSEEEEEEESCCH
T ss_pred CCeeEEeccCCCH
Confidence 4899999998753
No 86
>3gpg_A NSP3, non-structural protein 3; macro domain, X domain, alphavirus, VIZI enzymes involved in replication, ATP-binding, cell membrane endosome; 1.65A {Chikungunya virus} PDB: 3gpo_A* 3gpq_A
Probab=26.21 E-value=75 Score=20.50 Aligned_cols=20 Identities=5% Similarity=-0.150 Sum_probs=15.5
Q ss_pred CCeeeEEeecccceeEEeeC
Q psy1574 43 DDIVTLGITNQRETTVVWDL 62 (124)
Q Consensus 43 ~~I~~i~is~~~~~~v~~d~ 62 (124)
..++.|++...+.|+.-+..
T Consensus 107 ~~~~SIAfP~IstGi~g~P~ 126 (168)
T 3gpg_A 107 LGVNSVAIPLLSTGVYSGGK 126 (168)
T ss_dssp HTCSEEEEECTTSSTTSTTS
T ss_pred hCCcEEEECccccCCCCCCH
Confidence 47789999999888766654
No 87
>1rbl_M Ribulose 1,5 bisphosphate carboxylase/oxygenase ( chain); lyase(carbon-carbon), lyase; HET: CAP; 2.20A {Synechococcus elongatus} SCOP: d.73.1.1 PDB: 1rsc_M*
Probab=26.10 E-value=1.1e+02 Score=18.34 Aligned_cols=37 Identities=22% Similarity=0.275 Sum_probs=25.5
Q ss_pred eeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeeccccee
Q psy1574 12 WAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETT 57 (124)
Q Consensus 12 ~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~ 57 (124)
....|+.++...+.+|.++- +.+-|+-||++....+-
T Consensus 62 f~~~d~~~Vl~Ele~C~k~~---------p~~yVRligfD~~~q~q 98 (109)
T 1rbl_M 62 FACAAPQQVLDEVRECRSEY---------GDCYIRVAGFDNIKECQ 98 (109)
T ss_dssp TTCCCHHHHHHHHHHHHHHC---------TTSEEEEEEEETTTTEE
T ss_pred cCCCCHHHHHHHHHHHHHHC---------CCCeEEEEEEeCCCcEE
Confidence 34568888877777775542 34689999999865543
No 88
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=26.07 E-value=85 Score=21.74 Aligned_cols=13 Identities=15% Similarity=0.457 Sum_probs=10.7
Q ss_pred CCeeeEEeecccc
Q psy1574 43 DDIVTLGITNQRE 55 (124)
Q Consensus 43 ~~I~~i~is~~~~ 55 (124)
..|+.||+|.+..
T Consensus 140 Gkir~iGvSn~~~ 152 (290)
T 4gie_A 140 KKVRAIGVSNFEP 152 (290)
T ss_dssp TSEEEEEEESCCH
T ss_pred CCcceeeecCCCH
Confidence 4899999999753
No 89
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=26.04 E-value=73 Score=22.54 Aligned_cols=28 Identities=14% Similarity=0.215 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccc
Q psy1574 16 DPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRE 55 (124)
Q Consensus 16 dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~ 55 (124)
+.++.|+++.++ .+ . ..|++||||++..
T Consensus 143 ~~~e~~~ale~l----~~----~----Gkir~iGvSn~~~ 170 (331)
T 1s1p_A 143 DLCTTWEAMEKC----KD----A----GLAKSIGVSNFNR 170 (331)
T ss_dssp CHHHHHHHHHHH----HH----T----TSEEEEEEESCCH
T ss_pred CHHHHHHHHHHH----HH----c----CCccEEEEeCCCH
Confidence 445666665444 33 2 5899999999753
No 90
>2y8n_B 4-hydroxyphenylacetate decarboxylase small subuni; lyase, radical chemistry, metalloenzyme, iron-sulfur center; 1.75A {Clostridium scatologenes} PDB: 2yaj_B*
Probab=25.92 E-value=45 Score=19.20 Aligned_cols=24 Identities=17% Similarity=0.122 Sum_probs=18.7
Q ss_pred EEeecccceeEEeeCCCCcccccce
Q psy1574 48 LGITNQRETTVVWDLNTGEPLYNAI 72 (124)
Q Consensus 48 i~is~~~~~~v~~d~~~G~pl~p~i 72 (124)
=|++-...++|++|- +|.|+.|-+
T Consensus 16 KG~C~~s~~~V~iDg-e~~~~C~~F 39 (86)
T 2y8n_B 16 KGLCALTKGMVPIDG-EGSEACPNF 39 (86)
T ss_dssp EEEETTTCCEEESSS-TTCBCCTTC
T ss_pred hhhhhhcCCeEEecC-CCCccchhc
Confidence 467778889999998 488876644
No 91
>3zyt_A Esterase A, ESTA; hydrolase, enzymatic promiscuity, beta-lactamase; 2.45A {Arthrobacter nitroguajacolicus}
Probab=25.86 E-value=42 Score=24.11 Aligned_cols=41 Identities=15% Similarity=0.160 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCccccc
Q psy1574 22 QAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYN 70 (124)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p 70 (124)
+.+.+++++.+++ . .+.|.+++-...|....|...|+|+++
T Consensus 11 e~v~~~~~~~~~~---~-----~~~GaavaV~~~G~~v~d~~~g~p~~~ 51 (372)
T 3zyt_A 11 EPVAELFGVFLEQ---D-----PDYSAQVAAYHRGVKVLDLSGGPHIRP 51 (372)
T ss_dssp HHHHHHHHHHHHH---C-----TTCCEEEEEEETTEEEEEEEESTTCCT
T ss_pred HHHHHHHHHHHHc---C-----CCceEEEEEEECCEEEEECCCCCCCCC
Confidence 4566667766654 2 223334444445556666545788765
No 92
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=25.61 E-value=75 Score=22.34 Aligned_cols=27 Identities=15% Similarity=0.249 Sum_probs=18.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeeccc
Q psy1574 16 DPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQR 54 (124)
Q Consensus 16 dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~ 54 (124)
+.++.|+++.++ .+ . ..|++||||++.
T Consensus 143 ~~~e~~~ale~l----~~----~----Gkir~iGvSn~~ 169 (323)
T 1afs_A 143 DICDTWEAMEKC----KD----A----GLAKSIGVSNFN 169 (323)
T ss_dssp CHHHHHHHHHHH----HH----T----TSEEEEEEESCC
T ss_pred CHHHHHHHHHHH----HH----c----CCcCEEEeeCCC
Confidence 456677665444 33 2 589999999975
No 93
>3nyi_A FAT acid-binding protein; stearic acid, DEGV family protein, structural genomics, PSI- protein structure initiative; HET: STE; 1.90A {Eubacterium ventriosum} SCOP: c.119.1.0
Probab=24.92 E-value=90 Score=21.91 Aligned_cols=41 Identities=15% Similarity=0.118 Sum_probs=26.1
Q ss_pred eeeCHHHHHHHHHHH--------------HHHHHHHHHhCCCCCCCeeeEEeecccce
Q psy1574 13 AEQDPMEILQAVQTT--------------MDRAIEKLSAHGLSRDDIVTLGITNQRET 56 (124)
Q Consensus 13 ~e~dp~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~I~~i~is~~~~~ 56 (124)
.+.+++++++.+.+. +.++.+++.+.| ++|..|.+|+...|
T Consensus 44 ~di~~~efy~~~~~~~~~~p~TSqps~~~~~~~f~~l~~~g---~~ii~i~iSs~LSG 98 (297)
T 3nyi_A 44 VDITRDECYQRMVDDPKLFPKTSLPSVESYADVFRSFVEQG---FPVVCFTITTLFSG 98 (297)
T ss_dssp TTBCHHHHHHHHHHCTTCCCEEECCCHHHHHHHHHHHHTTT---CCEEEEESCTTTCS
T ss_pred CCCCHHHHHHHHHhCCCCCceecCCCHHHHHHHHHHHHHCC---CeEEEEECCCcHhH
Confidence 357788888887654 234455443333 68999998885443
No 94
>1svd_M Ribulose bisphosphate carboxylase small chain; beta-alpha-barrel, lyase; 1.80A {Halothiobacillus neapolitanus} SCOP: d.73.1.1
Probab=24.77 E-value=1.2e+02 Score=18.24 Aligned_cols=37 Identities=11% Similarity=0.210 Sum_probs=25.5
Q ss_pred eeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeeccccee
Q psy1574 12 WAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETT 57 (124)
Q Consensus 12 ~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~ 57 (124)
....|+.++...+.+|.++- +.+-|+-||++....+-
T Consensus 64 f~~~d~~~Vl~El~~C~k~~---------p~~yVRligfD~~~q~q 100 (110)
T 1svd_M 64 FGEQNVDNVLAEIEACRSAY---------PTHQVKLVAYDNYAQSL 100 (110)
T ss_dssp TTCCCHHHHHHHHHHHHHHS---------TTSEEEEEEEETTTTEE
T ss_pred cCCCCHHHHHHHHHHHHHHC---------CCCeEEEEEEeCCCCEE
Confidence 34567888877777776542 34689999999865543
No 95
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=24.67 E-value=83 Score=22.08 Aligned_cols=27 Identities=19% Similarity=0.359 Sum_probs=18.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeeccc
Q psy1574 16 DPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQR 54 (124)
Q Consensus 16 dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~ 54 (124)
+.++.|+++.++ .+ . ..|++||||++.
T Consensus 146 ~~~e~~~al~~l----~~----~----Gkir~iGvSn~~ 172 (322)
T 1mi3_A 146 PILETWKALEKL----VA----A----GKIKSIGVSNFP 172 (322)
T ss_dssp CHHHHHHHHHHH----HH----T----TSEEEEEEESCC
T ss_pred CHHHHHHHHHHH----HH----c----CCcCEEEEcCCC
Confidence 446666665444 33 2 489999999975
No 96
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=24.30 E-value=67 Score=22.48 Aligned_cols=29 Identities=10% Similarity=0.204 Sum_probs=19.0
Q ss_pred eCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccc
Q psy1574 15 QDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRE 55 (124)
Q Consensus 15 ~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~ 55 (124)
.+.++.|+++.++ .+ . ..|++||||++..
T Consensus 142 ~~~~e~~~ale~l----~~----~----Gkir~iGvSn~~~ 170 (312)
T 1zgd_A 142 FDVKGVWESMEES----LK----L----GLTKAIGVSNFSV 170 (312)
T ss_dssp CCHHHHHHHHHHH----HH----T----TSBSCEEEESCCH
T ss_pred ccHHHHHHHHHHH----HH----c----CCCCEEEEeCCCH
Confidence 3456666665444 33 2 4899999999853
No 97
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0
Probab=24.20 E-value=1e+02 Score=20.99 Aligned_cols=37 Identities=14% Similarity=0.196 Sum_probs=26.5
Q ss_pred eCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeeccccee
Q psy1574 15 QDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETT 57 (124)
Q Consensus 15 ~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~ 57 (124)
.|.+.+|+++...+++-+++ .|. .=..|++||--.|.
T Consensus 4 ~~~~~~~~~l~~~l~d~v~~---~g~---~~vvv~lSGGiDSs 40 (249)
T 3p52_A 4 MDWQKITEKMCDFIQEKVKN---SQS---QGVVLGLSGGIDSA 40 (249)
T ss_dssp CCHHHHHHHHHHHHHHHHHT---SSC---SEEEEECCSSHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHH---hCC---CCEEEEcCCCHHHH
Confidence 47889999999999998864 342 33467888754444
No 98
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp}
Probab=24.12 E-value=1e+02 Score=20.96 Aligned_cols=37 Identities=11% Similarity=0.138 Sum_probs=26.4
Q ss_pred eCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeeccccee
Q psy1574 15 QDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETT 57 (124)
Q Consensus 15 ~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~ 57 (124)
.|+++.++.+...+++.+++ .|. .=..|++||--.|.
T Consensus 7 ~~~~~~~~~l~~~l~~~v~~---~~~---~~vvv~lSGGiDSs 43 (249)
T 3fiu_A 7 FSPKEYSQKLVNWLSDSCMN---YPA---EGFVIGLSGGIDSA 43 (249)
T ss_dssp CCHHHHHHHHHHHHHHHHHT---TTC---SEEEEECCSSHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHH---hCC---CCEEEEecCcHHHH
Confidence 58999999999999998764 332 22457788754443
No 99
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1
Probab=24.04 E-value=85 Score=22.11 Aligned_cols=13 Identities=23% Similarity=0.514 Sum_probs=11.0
Q ss_pred CCeeeEEeecccc
Q psy1574 43 DDIVTLGITNQRE 55 (124)
Q Consensus 43 ~~I~~i~is~~~~ 55 (124)
..|++||||++..
T Consensus 171 Gkir~iGvSn~~~ 183 (346)
T 1lqa_A 171 GKIRYIGVSNETA 183 (346)
T ss_dssp TSEEEEEEESCCH
T ss_pred CCeEEEEecCCCH
Confidence 5899999999864
No 100
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=24.01 E-value=1.1e+02 Score=21.15 Aligned_cols=31 Identities=16% Similarity=0.230 Sum_probs=19.2
Q ss_pred CCeeeEEeecccceeEEeeCCCCccccc-ce-eeecc
Q psy1574 43 DDIVTLGITNQRETTVVWDLNTGEPLYN-AI-VWSDT 77 (124)
Q Consensus 43 ~~I~~i~is~~~~~~v~~d~~~G~pl~p-~i-~w~D~ 77 (124)
.+|.+|||+..+ ++|.++|..+.+ .+ .|.+-
T Consensus 55 ~~i~gigi~~pG----~vd~~~g~v~~~~~l~~w~~~ 87 (297)
T 4htl_A 55 TDVTGIAVSAPG----YVNPKTGLITMGGAIRRFDNF 87 (297)
T ss_dssp TTCCEEEEEESS----EECTTTCEEEECTTCGGGTTE
T ss_pred CCeeEEEEecCc----ceeCCCCEEEeCCCCCCccCC
Confidence 478899998765 567534666543 23 36554
No 101
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Probab=23.70 E-value=1e+02 Score=21.99 Aligned_cols=28 Identities=11% Similarity=0.241 Sum_probs=18.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccc
Q psy1574 16 DPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRE 55 (124)
Q Consensus 16 dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~ 55 (124)
+.++.|+++.++ .+ . ..|++||||+...
T Consensus 167 ~~~e~~~aLe~l----~~----~----GkIr~iGvSn~~~ 194 (344)
T 2bgs_A 167 DMEGVWKEMENL----VK----D----GLVKDIGVCNYTV 194 (344)
T ss_dssp CHHHHHHHHHHH----HH----T----TSEEEEEEESCCH
T ss_pred CHHHHHHHHHHH----HH----c----CCccEEEEecCCH
Confidence 456666665444 33 2 4899999999753
No 102
>3kjj_A NMB1025 protein; YJGF protein family, OPPF, structural genomics, oxford protein production facility, UN function; 1.90A {Neisseria meningitidis serogroup B} PDB: 3kjk_A
Probab=23.53 E-value=1.1e+02 Score=18.52 Aligned_cols=30 Identities=7% Similarity=0.096 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCee
Q psy1574 17 PMEILQAVQTTMDRAIEKLSAHGLSRDDIV 46 (124)
Q Consensus 17 p~~~~~~~~~~~~~~~~~~~~~~~~~~~I~ 46 (124)
++++-+++..+++.+..-++++|.+.++|.
T Consensus 40 ~~d~~~Q~~~~l~nl~~~L~~aG~~l~~Vv 69 (128)
T 3kjj_A 40 GETAAEQTADVLAQIDRWLAECGSDKAHVL 69 (128)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCCCHHHEE
Confidence 445566666666666555555777777764
No 103
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=23.52 E-value=87 Score=22.04 Aligned_cols=28 Identities=14% Similarity=0.253 Sum_probs=18.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccc
Q psy1574 16 DPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRE 55 (124)
Q Consensus 16 dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~ 55 (124)
+.++.|+++.++ .+ . ..|++||||++..
T Consensus 146 ~~~e~~~ale~l----~~----~----Gkir~iGvSn~~~ 173 (326)
T 3buv_A 146 NLCATWEAMEAC----KD----A----GLVKSLGVSNFNR 173 (326)
T ss_dssp CHHHHHHHHHHH----HH----T----TSEEEEEEESCCH
T ss_pred cHHHHHHHHHHH----HH----c----CCccEEEEeCCCH
Confidence 345666665444 33 2 5899999999853
No 104
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=23.44 E-value=67 Score=22.81 Aligned_cols=29 Identities=14% Similarity=0.256 Sum_probs=19.0
Q ss_pred eCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccc
Q psy1574 15 QDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRE 55 (124)
Q Consensus 15 ~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~ 55 (124)
.+.++.|+++.++ .+ . ..|++||||++..
T Consensus 150 ~~~~e~~~aL~~l----~~----~----Gkir~iGvSn~~~ 178 (331)
T 3h7r_A 150 PDITSTWKAMEAL----YD----S----GKARAIGVSNFSS 178 (331)
T ss_dssp CCHHHHHHHHHHH----HH----T----TSBSSEEEESCCH
T ss_pred CCHHHHHHHHHHH----HH----c----CCCcEEEecCCCH
Confidence 3556777665444 33 2 4899999998754
No 105
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=23.30 E-value=88 Score=21.96 Aligned_cols=13 Identities=23% Similarity=0.429 Sum_probs=10.7
Q ss_pred CCeeeEEeecccc
Q psy1574 43 DDIVTLGITNQRE 55 (124)
Q Consensus 43 ~~I~~i~is~~~~ 55 (124)
..|+.||+|.+..
T Consensus 171 Gkir~iGvSn~~~ 183 (314)
T 3b3d_A 171 GRIKAIGVSNFQI 183 (314)
T ss_dssp TSEEEEEEESCCH
T ss_pred CCEeEEEecCCch
Confidence 4899999999754
No 106
>3j20_Q 30S ribosomal protein S15P/S13E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=22.97 E-value=46 Score=21.49 Aligned_cols=51 Identities=24% Similarity=0.222 Sum_probs=34.5
Q ss_pred ccccCCCCeeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCccccccee
Q psy1574 4 STISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYNAIV 73 (124)
Q Consensus 4 ~~~~~~~g~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p~i~ 73 (124)
|+....|-|...+++++-+.+++..+ .|.++++| |+++=|. .|-|.--.++
T Consensus 17 P~~~~~P~W~~~~~eev~~~i~klak--------kG~~pSqI----------G~~LRD~-~gip~Vk~vt 67 (158)
T 3j20_Q 17 PPRTAPPIWVEYTVEEIENLVVKLRK--------EGYSTAMI----------GTILRDQ-YGIPSVKLFK 67 (158)
T ss_dssp CCCSSCCSSSCCCHHHHHHHHHHHHH--------HTCCHHHH----------HHHHHHT-TCCSCHHHHH
T ss_pred CCCCCCCCCcCCCHHHHHHHHHHHHH--------CCCCHHHh----------hHHHhcc-CCCCCeeecc
Confidence 44556778999999999777765532 26777766 5566677 5777654443
No 107
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=22.64 E-value=1.3e+02 Score=19.30 Aligned_cols=31 Identities=16% Similarity=0.413 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCeeeEEee
Q psy1574 21 LQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 51 (124)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is 51 (124)
.+.....+..+++.+.+.++++++|..+|+|
T Consensus 78 ~~~~~~~i~~~~~~~~~~~i~~~ri~l~G~S 108 (210)
T 4h0c_A 78 LDSALALVGEVVAEIEAQGIPAEQIYFAGFS 108 (210)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEET
T ss_pred HHHHHHHHHHHHHHHHHhCCChhhEEEEEcC
Confidence 3444455555555554568888888877765
No 108
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=22.60 E-value=73 Score=22.28 Aligned_cols=28 Identities=14% Similarity=0.347 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccc
Q psy1574 16 DPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRE 55 (124)
Q Consensus 16 dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~ 55 (124)
+.++.|+++.++ .+ . ..|++||||++..
T Consensus 137 ~~~e~~~ale~l----~~----~----Gkir~iGvSn~~~ 164 (316)
T 1us0_A 137 NILDTWAAMEEL----VD----E----GLVKAIGISNFNH 164 (316)
T ss_dssp CHHHHHHHHHHH----HH----T----TSBSCEEEESCCH
T ss_pred cHHHHHHHHHHH----HH----C----CCccEEEEecCCH
Confidence 445666665444 32 2 4899999999853
No 109
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=22.55 E-value=76 Score=22.15 Aligned_cols=29 Identities=17% Similarity=0.263 Sum_probs=19.2
Q ss_pred eCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccc
Q psy1574 15 QDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRE 55 (124)
Q Consensus 15 ~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~ 55 (124)
.+.++.|+++.++ .+ . ..|+.||+|....
T Consensus 137 ~~~~e~~~al~~l----~~----~----Gkir~iGvSn~~~ 165 (324)
T 4gac_A 137 THYKETWKALEVL----VA----K----GLVKALGLSNFNS 165 (324)
T ss_dssp CCHHHHHHHHHHH----HH----T----TSBSCEEEESCCH
T ss_pred CCHHHHHHHHHHH----HH----C----CCeeEecCCCCCH
Confidence 4566777776544 33 2 4899999998753
No 110
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=22.54 E-value=73 Score=19.16 Aligned_cols=34 Identities=15% Similarity=-0.010 Sum_probs=23.7
Q ss_pred ceeEEeeCCCCcccccceeeeccCcHHHHHHHHhh
Q psy1574 55 ETTVVWDLNTGEPLYNAIVWSDTRADNIVDQVLAK 89 (124)
Q Consensus 55 ~~~v~~d~~~G~pl~p~i~w~D~R~~~~~~~~~~~ 89 (124)
.+++++|+ +|+.+....-..+....+..+.+.+.
T Consensus 117 P~~~lid~-~G~i~~~~~G~~~~~~~~~~~~~~~~ 150 (158)
T 3hdc_A 117 PDTFIVDR-KGIIRQRVTGGIEWDAPKVVSYLKSL 150 (158)
T ss_dssp SEEEEECT-TSBEEEEEESCCCTTSHHHHHHHHTT
T ss_pred ceEEEEcC-CCCEEEEEeCCCccchHHHHHHHHhh
Confidence 46799999 59988766666666666666666543
No 111
>2qas_A SSPB, hypothetical protein; SSPB, adaptor, CLPX, unknown function, hydrolase activator; 2.55A {Caulobacter vibrioides} PDB: 2qaz_A
Probab=22.47 E-value=97 Score=19.93 Aligned_cols=40 Identities=15% Similarity=0.194 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHHhCC-CCCCCeeeEEeecccceeEE
Q psy1574 20 ILQAVQTTMDRAIEKLSAHG-LSRDDIVTLGITNQRETTVV 59 (124)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~-~~~~~I~~i~is~~~~~~v~ 59 (124)
.-+|+...+|+++..+...| .....---|.+.+...|+.+
T Consensus 20 ~~~AlrgVvr~vL~~va~~g~LPg~HHFyITF~T~~pGV~i 60 (157)
T 2qas_A 20 AQDALRGVVKAALKKAAAPGGLPEPHHLYITFKTKAAGVSG 60 (157)
T ss_dssp HHHHHHHHHHHHHHHHSSTTCSCTTCCEEEEEETTSTTCBC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCccEEEEEEecCCCCccC
Confidence 35677777888887765555 66566567777777655543
No 112
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=22.01 E-value=86 Score=22.10 Aligned_cols=28 Identities=18% Similarity=0.292 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCeeeEEeeccc
Q psy1574 24 VQTTMDRAIEKLSAHGLSRDDIVTLGITNQR 54 (124)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~ 54 (124)
..++.++++++ +|+++++|..|-+++..
T Consensus 66 a~~Aa~~aL~~---ag~~~~dId~li~~t~t 93 (350)
T 4ewp_A 66 AVGAAREALER---AGLQGSDLDAVIVSTVT 93 (350)
T ss_dssp HHHHHHHHHHH---TTCCGGGCSEEEEECSC
T ss_pred HHHHHHHHHHH---cCCCHHHCCEEEEEecc
Confidence 35566666664 79999999988877654
No 113
>3brc_A Conserved protein of unknown function; methanobacterium thermoautotrophicum, STR genomics, MCSG, PSI-2; 1.60A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=21.94 E-value=35 Score=21.80 Aligned_cols=26 Identities=27% Similarity=0.381 Sum_probs=21.1
Q ss_pred eEEeecccceeEEeeCCCCccccccee
Q psy1574 47 TLGITNQRETTVVWDLNTGEPLYNAIV 73 (124)
Q Consensus 47 ~i~is~~~~~~v~~d~~~G~pl~p~i~ 73 (124)
-+|+-|.+.=+|.+|+. |+.|+-+++
T Consensus 102 RLGvPGSGSmLvimD~k-GRiLtas~S 127 (156)
T 3brc_A 102 RLGVPGSGSLLVIMDSR-GRLLSAAMS 127 (156)
T ss_dssp ECSSTTSCEEEEEEETT-SCEEEEEEE
T ss_pred cccCCCCccEEEEEcCC-CcEEeeccC
Confidence 36688888889999996 999987653
No 114
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=21.85 E-value=75 Score=22.56 Aligned_cols=28 Identities=14% Similarity=0.226 Sum_probs=18.5
Q ss_pred eCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeeccc
Q psy1574 15 QDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQR 54 (124)
Q Consensus 15 ~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~ 54 (124)
.+.++.|+++.++ .+ . ..|++||||++.
T Consensus 154 ~~~~e~~~aL~~l----~~----~----Gkir~iGvSn~~ 181 (335)
T 3h7u_A 154 VDIPSTWKAMEAL----YD----S----GKARAIGVSNFS 181 (335)
T ss_dssp CCHHHHHHHHHHH----HH----T----TSBSSEEEESCC
T ss_pred CCHHHHHHHHHHH----HH----c----CCccEEEecCCC
Confidence 3556677665444 33 2 489999999875
No 115
>3u66_A SCIP/TSSL, putative type VI secretion protein; duble helical bundle, protein secretion, attached to inner M unknown function; 2.63A {Escherichia coli}
Probab=21.60 E-value=72 Score=20.88 Aligned_cols=35 Identities=17% Similarity=0.217 Sum_probs=28.2
Q ss_pred eeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeee
Q psy1574 13 AEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVT 47 (124)
Q Consensus 13 ~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~ 47 (124)
...|++.+++.+...++++-+++.++|++.+.|..
T Consensus 28 ~~~d~~~lr~~~~~~i~~~e~~~~~~g~~~~~i~~ 62 (183)
T 3u66_A 28 PVEDGKALYRRACQLVKQAREELAEAGFSQKSSDI 62 (183)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 44589999999999999988877778888776543
No 116
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=21.50 E-value=1.4e+02 Score=20.33 Aligned_cols=39 Identities=15% Similarity=0.430 Sum_probs=26.9
Q ss_pred eeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeE
Q psy1574 14 EQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTV 58 (124)
Q Consensus 14 e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v 58 (124)
..|++++++.+...+++.+.+ .+. .. ..|++||--.|.+
T Consensus 2 ~~~~~~~~~~l~~~l~~~v~~---~~~--~~-vvv~lSGGiDSsv 40 (268)
T 1xng_A 2 QKDYQKLIVYLCDFLEKEVQK---RGF--KK-VVYGLSGGLDSAV 40 (268)
T ss_dssp -CCHHHHHHHHHHHHHHHHHH---TTC--CC-EEEECCSSHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHH---hCC--CC-EEEEccCcHHHHH
Confidence 357889999999999888764 332 23 4688888665554
No 117
>2nys_A AGR_C_3712P; SSPB, stringent starvation protein B, NESG, ATR88, structural genomics, PSI-2, protein structure initiative; 2.70A {Agrobacterium tumefaciens str} SCOP: b.136.1.2
Probab=21.43 E-value=1.1e+02 Score=20.14 Aligned_cols=39 Identities=13% Similarity=0.205 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHHHhCC-CCCCCeeeEEeecccceeE
Q psy1574 20 ILQAVQTTMDRAIEKLSAHG-LSRDDIVTLGITNQRETTV 58 (124)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~-~~~~~I~~i~is~~~~~~v 58 (124)
+-+|+...+|+++..+...| .....---|.+.+...|+.
T Consensus 12 ~~~AlrgVvr~vL~~va~~g~LPg~HHFyITF~T~~pGV~ 51 (176)
T 2nys_A 12 AQDALRGVIRKVLGEVAATGRLPGDHHFFITFLTGAPGVR 51 (176)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCTTCCEEEEEESSSTTCB
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCccEEEEEEecCCCCcc
Confidence 35677777888877765555 6666666778777765553
No 118
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=21.39 E-value=1.8e+02 Score=19.47 Aligned_cols=18 Identities=17% Similarity=0.231 Sum_probs=14.2
Q ss_pred CHHHHHHHHHHHHHHHHH
Q psy1574 16 DPMEILQAVQTTMDRAIE 33 (124)
Q Consensus 16 dp~~~~~~~~~~~~~~~~ 33 (124)
+++++.+.+.+.++++.+
T Consensus 50 ~~~~~~~~i~~~i~~~~~ 67 (267)
T 1woq_A 50 TPESVAEAVALVVAELSA 67 (267)
T ss_dssp CHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 678888888888887764
No 119
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=21.37 E-value=88 Score=21.91 Aligned_cols=28 Identities=7% Similarity=0.153 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccc
Q psy1574 16 DPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRE 55 (124)
Q Consensus 16 dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~ 55 (124)
+.++.|+++.++ .+ . ..|++||||++..
T Consensus 130 ~~~e~~~al~~l----~~----~----Gkir~iGvSn~~~ 157 (317)
T 1qwk_A 130 PVEDVWRQFDAV----YK----A----GLAKAVGVSNWNN 157 (317)
T ss_dssp CHHHHHHHHHHH----HH----T----TSBSSEEEESCCH
T ss_pred CHHHHHHHHHHH----HH----c----CCeeEEEecCCCH
Confidence 456666665444 32 2 4899999998753
No 120
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=21.33 E-value=71 Score=18.80 Aligned_cols=77 Identities=8% Similarity=0.146 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCccccc-ceeeeccCcHHHHHHHHhhCCCCch
Q psy1574 17 PMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYN-AIVWSDTRADNIVDQVLAKFPDQDK 95 (124)
Q Consensus 17 p~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p-~i~w~D~R~~~~~~~~~~~~~~~~~ 95 (124)
...+-+.+.+++.+++. .+.+ -..|.+.. ...+.++.. -.|..= -|.....|+.++.+++.+.+ .
T Consensus 16 ~~~l~~~~~~~l~~~lg------kP~~-~~~v~~~~--~~~~~~~g~-~~~~~~i~I~~~~g~~~eqk~~l~~~i----~ 81 (119)
T 2os5_A 16 PANFEERLTDLLAESMN------KPRN-RIAIEVLA--GQRITHGAS-RNPVAVIKVESIGALSADDNIRHTQKI----T 81 (119)
T ss_dssp CTTHHHHHHHHHHHHHT------CCGG-GCEEEEEC--SCCCCBTTB-CSSCEEEEEEESSCCCHHHHHHHHHHH----H
T ss_pred HHHHHHHHHHHHHHHHC------cChH-HEEEEEEC--CccEEEcCC-CCCeEEEEEEEecCCCHHHHHHHHHHH----H
Confidence 66677777777777663 3444 33444432 223333321 222210 11345678888888887765 3
Q ss_pred hhhhhhhCCCCC
Q psy1574 96 DYLKPICGLPVS 107 (124)
Q Consensus 96 ~~~~~~tG~~~~ 107 (124)
+.+.+..|.++.
T Consensus 82 ~~l~~~lgi~~~ 93 (119)
T 2os5_A 82 QFCQDTLKLPKD 93 (119)
T ss_dssp HHHHHHHCCCGG
T ss_pred HHHHHHhCcCcc
Confidence 566667787654
No 121
>1vhu_A Hypothetical protein AF1521; structural genomics, unknown function; HET: MSE MES; 1.34A {Archaeoglobus fulgidus} SCOP: c.50.1.2 PDB: 2bfq_A* 1hjz_A* 2bfr_A*
Probab=21.14 E-value=67 Score=21.42 Aligned_cols=37 Identities=11% Similarity=0.093 Sum_probs=22.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEee
Q psy1574 16 DPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWD 61 (124)
Q Consensus 16 dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d 61 (124)
+++.+.+++..+++.+.+ ..++.|++...+.|+.-++
T Consensus 121 ~~~~L~~~y~~~L~~A~~---------~~i~SIAfP~IstG~~G~p 157 (211)
T 1vhu_A 121 LKEKLYKAFLGPLEKAEE---------MGVESIAFPAVSAGIYGCD 157 (211)
T ss_dssp HHHHHHHHHHHHHHHHHH---------HTCCEEEECCTTSSTTCCC
T ss_pred hHHHHHHHHHHHHHHHHH---------cCCCEEEeccccCCCCCCC
Confidence 344455555555544433 3678899998887775444
No 122
>3gtz_A Putative translation initiation inhibitor; structural genomics, unknown function, PSI-2, protein struct initiative; 2.50A {Salmonella typhimurium}
Probab=20.63 E-value=85 Score=18.88 Aligned_cols=30 Identities=17% Similarity=0.278 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCee
Q psy1574 17 PMEILQAVQTTMDRAIEKLSAHGLSRDDIV 46 (124)
Q Consensus 17 p~~~~~~~~~~~~~~~~~~~~~~~~~~~I~ 46 (124)
++++-++...+++.+..-++++|.+.++|.
T Consensus 34 ~~d~~~Q~~~~l~nl~~~L~~aG~~~~~Vv 63 (124)
T 3gtz_A 34 DADAFEQTANTLAQIDAVLEKQGSSKSRIL 63 (124)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCCCHHHEE
Confidence 455666666677666655556777777764
No 123
>3zxw_B Ribulose bisphosphate carboxylase small chain; CO2/O2 specificity, carbon dioxide fixation, photosynthesis, thermostability; HET: KCX CAP; 2.10A {Thermosynechococcus elongatus} PDB: 2ybv_B*
Probab=20.27 E-value=1.6e+02 Score=17.95 Aligned_cols=34 Identities=15% Similarity=0.176 Sum_probs=24.6
Q ss_pred eeeeCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeeccc
Q psy1574 12 WAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQR 54 (124)
Q Consensus 12 ~~e~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~ 54 (124)
.-..|+.++...+.+|.++- +.+-|+-||+++..
T Consensus 61 f~~~d~~~Vl~Ele~C~k~~---------p~~yVRliGfD~~~ 94 (118)
T 3zxw_B 61 FNCTNAQDVLNEVQQCRSEY---------PNCFIRVVAFDNIK 94 (118)
T ss_dssp TTCCCHHHHHHHHHHHHHHC---------TTSEEEEEEEETTT
T ss_pred cCCCCHHHHHHHHHHHHHHC---------CCceEEEEEEeCCc
Confidence 44678888888877776542 34789999999864
No 124
>3cpt_A Mitogen-activated protein kinase kinase 1- interacting protein 1; scaffold, complex, alpha/beta, endosome, membrane, lysosome; 1.90A {Homo sapiens} SCOP: d.110.7.1 PDB: 1sko_A 2zl1_A 1vet_A 1veu_A
Probab=20.07 E-value=58 Score=20.66 Aligned_cols=41 Identities=22% Similarity=0.256 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEeeCCCCcccccce
Q psy1574 19 EILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYNAI 72 (124)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~d~~~G~pl~p~i 72 (124)
-++..+.+.+++.+.++-. ..+.| .+++.-|+ ||-|+-.+.
T Consensus 15 ~~~~~m~~~Lq~~L~~ll~---rv~Gl---------~aI~ItDr-DGVpi~kv~ 55 (143)
T 3cpt_A 15 LYFQGSADDLKRFLYKKLP---SVEGL---------HAIVVSDR-DGVPVIKVA 55 (143)
T ss_dssp -------CHHHHHHHHHGG---GSTTE---------EEEEEECT-TSCEEEEEE
T ss_pred hhhhhhHHHHHHHHHHHHh---ccCCe---------EEEEEECC-CCcEEEEec
Confidence 3566666666666655411 11233 45666677 587775543
No 125
>3q6z_A Poly [ADP-ribose] polymerase 14; structural genomics consortium, SGC, ADP-ribose binding, TRA; HET: APR; 2.23A {Homo sapiens}
Probab=20.06 E-value=1.2e+02 Score=20.29 Aligned_cols=34 Identities=3% Similarity=-0.002 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCeeeEEeecccceeEEe
Q psy1574 22 QAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVW 60 (124)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~I~~i~is~~~~~~v~~ 60 (124)
+.+..|.+.+++...+ ..++.|++...+.|+.-+
T Consensus 130 ~~L~~~y~~~L~~A~~-----~~i~SIAfP~IstG~~g~ 163 (214)
T 3q6z_A 130 YLLRRAVQLSLCLAEK-----YKYRSIAIPAISSGVFGF 163 (214)
T ss_dssp HHHHHHHHHHHHHHHH-----TTCSEEEECCTTSSTTCC
T ss_pred HHHHHHHHHHHHHHHH-----cCCcEEEECcccCCCCCC
Confidence 3455555555544322 478899999888776443
Done!