RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy15740
         (114 letters)



>d2c1ca1 c.56.5.1 (A:7-309) Carboxypeptidase B {Corn earworm
           (Helicoverpa zea) [TaxId: 7113]}
          Length = 312

 Score = 76.7 bits (188), Expect = 1e-18
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)

Query: 62  ASDDWAKGVAKIKYTYTIEL--RDKGNYGFLLPASHILPVGRESLAAIKAIARE 113
           +S+D+A  +  +  +YT EL     G  GF LP  +I  V RE+   I   AR 
Sbjct: 254 SSEDYAHSI-GVPLSYTYELPGLSSGWDGFHLPPQYIEQVCRETWEGIVVGARR 306


>d1z5ra1 c.56.5.1 (A:6-308) Carboxypeptidase B {Pig (Sus scrofa)
           [TaxId: 9823]}
          Length = 304

 Score = 74.8 bits (183), Expect = 5e-18
 Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 62  ASDDWAKGVAKIKYTYTIELRDKGNYGFLLPASHILPVGRESLAAIKAIAR 112
            SDDWA     IKY++T ELRDKG YGF+LP S I     E++ AIK +  
Sbjct: 249 GSDDWAYDQ-GIKYSFTFELRDKGRYGFILPESQIQATCEETMLAIKYVTN 298


>d1ayea1 c.56.5.1 (A:1-309) Carboxypeptidase A {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 307

 Score = 74.1 bits (181), Expect = 9e-18
 Identities = 25/52 (48%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 62  ASDDWAKGVAKIKYTYTIELRDKGNYGFLLPASHILPVGRESLAAIKAIARE 113
            S DW+     IKY++  ELRD G YGFLLPA  ILP   E+   +KAI   
Sbjct: 251 GSIDWSYDY-GIKYSFAFELRDTGRYGFLLPARQILPTAEETWLGLKAIMEH 301


>d2bo9a1 c.56.5.1 (A:4-307) Carboxypeptidase A {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 305

 Score = 72.2 bits (176), Expect = 5e-17
 Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 1/52 (1%)

Query: 62  ASDDWAKGVAKIKYTYTIELRDKGNYGFLLPASHILPVGRESLAAIKAIARE 113
           +S DWA     IK+ +T ELRD G YGFLLPA+ I+P   E+   +K I   
Sbjct: 251 SSIDWAYDN-GIKFAFTFELRDTGTYGFLLPANQIIPTAEETWLGLKTIMEH 301


>d1m4la_ c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus) [TaxId:
           9913]}
          Length = 307

 Score = 72.2 bits (176), Expect = 5e-17
 Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 1/52 (1%)

Query: 62  ASDDWAKGVAKIKYTYTIELRDKGNYGFLLPASHILPVGRESLAAIKAIARE 113
            S DW+     IKY++T ELRD G YGFLLPAS I+P  +E+   +  I   
Sbjct: 253 GSIDWSYN-QGIKYSFTFELRDTGRYGFLLPASQIIPTAQETWLGVLTIMEH 303


>d1jqga1 c.56.5.1 (A:1-310) Carboxypeptidase A {Cotton bollworm
           (Helicoverpa armigera) [TaxId: 29058]}
          Length = 317

 Score = 71.4 bits (174), Expect = 1e-16
 Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 5/56 (8%)

Query: 62  ASDDWAKGVAKIKYTYTIELRDKGN----YGFLLPASHILPVGRESLAAIKAIARE 113
            + D+A       ++YT EL    N     GFL+    I   G E+   IK  AR 
Sbjct: 256 GASDYAMQA-AAPFSYTYELPAYRNSVWFDGFLVDPDFIEQAGFETWEGIKVGARA 310


>d1obra_ c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyces
           vulgaris [TaxId: 2026]}
          Length = 323

 Score = 56.4 bits (135), Expect = 3e-11
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 2/52 (3%)

Query: 63  SDDWAKGVAKIKYTYTIELRDKG-NYGFLLPASHILPVGRESLAAIKAIARE 113
             DWA G  KI + +T E+     N GF  P   I      +  A+  +A +
Sbjct: 261 MTDWAYGQHKI-FAFTFEMYPTSYNPGFYPPDEVIGRETSRNKEAVLYVAEK 311


>d1h8la2 c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic domain
           {Crested duck (Lophonetta specularioides) [TaxId: 8836]}
          Length = 301

 Score = 32.9 bits (74), Expect = 0.005
 Identities = 7/52 (13%), Positives = 15/52 (28%), Gaps = 5/52 (9%)

Query: 62  ASDDWAKGVAKIKYTYTIELRDKGNYGFLLPASHILPVGRESLAAIKAIARE 113
              DW        +  TIEL           A  +     ++  ++    ++
Sbjct: 252 GMQDWNYLNTNC-FEVTIELGC----VKYPKAEELPKYWEQNRRSLLQFIKQ 298


>d1uwya2 c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic domain
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 296

 Score = 29.8 bits (66), Expect = 0.054
 Identities = 8/37 (21%), Positives = 12/37 (32%), Gaps = 6/37 (16%)

Query: 62  ASDDWAKGVAKIKYTYTIELRDKGNYGFLLPASHILP 98
              D+    A+  +  T+EL          P    LP
Sbjct: 247 GMQDYNYIWAQC-FEITLELSCCK-----YPREEKLP 277


>d1ju2a2 d.16.1.1 (A:294-463) Hydroxynitrile lyase {Almond (Prunus
           dulcis) [TaxId: 3755]}
          Length = 170

 Score = 26.6 bits (58), Expect = 0.64
 Identities = 11/59 (18%), Positives = 18/59 (30%), Gaps = 5/59 (8%)

Query: 8   PKSRFRVLSPKSDNYFQLPLCLGNLYKVMRKKGLIERLTCFRQFKFLLFVLHSWASDDW 66
           P S   +    S N    P    N Y  +      +   C    K +  +L + A   +
Sbjct: 72  PLSYGSLTLKSSSNVRVSPNVKFNYYSNL-----TDLSHCVSGMKKIGELLSTDALKPY 125


>d1smva_ b.121.4.7 (A:) Sobemovirus coat protein {SMV (Sesbania
           mosaic virus) [TaxId: 12558]}
          Length = 196

 Score = 23.7 bits (51), Expect = 6.2
 Identities = 6/17 (35%), Positives = 10/17 (58%)

Query: 67  AKGVAKIKYTYTIELRD 83
           A    +I  TYTI++ +
Sbjct: 172 AVAAGRIYDTYTIQMIE 188


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.328    0.142    0.443 

Gapped
Lambda     K      H
   0.267   0.0490    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 440,324
Number of extensions: 18973
Number of successful extensions: 56
Number of sequences better than 10.0: 1
Number of HSP's gapped: 53
Number of HSP's successfully gapped: 13
Length of query: 114
Length of database: 2,407,596
Length adjustment: 72
Effective length of query: 42
Effective length of database: 1,419,036
Effective search space: 59599512
Effective search space used: 59599512
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 47 (22.5 bits)