BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15742
(342 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P85107|TGS1_RAT Trimethylguanosine synthase OS=Rattus norvegicus GN=Tgs1 PE=1 SV=1
Length = 850
Score = 192 bits (489), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 139/220 (63%), Gaps = 32/220 (14%)
Query: 107 LENVPEEIWANPYLNKYYQQRYLYWSRYDEGILMDEESWYSVTPEKVAQHIASRCKASDV 166
+ +P EI + P L KY+ QRY +SR+D+GI +D+E
Sbjct: 625 INGLPPEIASVPELAKYWAQRYRLFSRFDDGIKLDKE----------------------- 661
Query: 167 VIDGWYSVTPEKVAQHIASRCKAS---DVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAK 223
GW+SVTPEK+A+HIA R S D+++D FCG GGNTIQFA ++VI+IDIDP K
Sbjct: 662 ---GWFSVTPEKIAEHIAGRVSQSFNCDIIVDAFCGVGGNTIQFALTGKRVIAIDIDPVK 718
Query: 224 LRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARS-SFSIDNIFP 282
+ LA++NA VYGV+ KI+FI GDF LAP L+ DVVFLSPPWGGP+YA + +F I +
Sbjct: 719 IDLARNNAEVYGVADKIEFICGDFLLLAPCLKADVVFLSPPWGGPDYATAETFDIRTMM- 777
Query: 283 EQGGGRRLFQVARGISPNVGYYLPRTSDVFEIFHDSGKKG 322
G +F++++ I+ N+ Y+LPR +DV ++ +G G
Sbjct: 778 -SPDGFEIFRLSQKITNNIVYFLPRNADVDQVASLAGPGG 816
>sp|Q923W1|TGS1_MOUSE Trimethylguanosine synthase OS=Mus musculus GN=Tgs1 PE=1 SV=2
Length = 853
Score = 191 bits (486), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 139/218 (63%), Gaps = 32/218 (14%)
Query: 109 NVPEEIWANPYLNKYYQQRYLYWSRYDEGILMDEESWYSVTPEKVAQHIASRCKASDVVI 168
++P EI + P L KY+ QRY +SR+D+GI +D+E
Sbjct: 625 DLPPEIASVPELAKYWAQRYRLFSRFDDGIKLDKE------------------------- 659
Query: 169 DGWYSVTPEKVAQHIASRCKAS---DVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLR 225
GW+SVTPEK+A+HIA R + DVV+D FCG GGNTIQFA ++VI+IDIDP K+
Sbjct: 660 -GWFSVTPEKIAEHIAGRVSQAFRCDVVVDAFCGVGGNTIQFALTGKRVIAIDIDPVKID 718
Query: 226 LAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARS-SFSIDNIFPEQ 284
LA++NA VYG++ KI+FI GDF LAP L+ DVVFLSPPWGGP+YA + +F I +
Sbjct: 719 LARNNAEVYGIADKIEFICGDFLLLAPCLKADVVFLSPPWGGPDYATAETFDIRTMM--S 776
Query: 285 GGGRRLFQVARGISPNVGYYLPRTSDVFEIFHDSGKKG 322
G +F++++ I+ N+ Y+LPR +D+ ++ +G G
Sbjct: 777 PDGFEIFRLSQKITNNIVYFLPRNADIDQVASLAGLGG 814
>sp|Q96RS0|TGS1_HUMAN Trimethylguanosine synthase OS=Homo sapiens GN=TGS1 PE=1 SV=3
Length = 853
Score = 189 bits (480), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 135/217 (62%), Gaps = 32/217 (14%)
Query: 110 VPEEIWANPYLNKYYQQRYLYWSRYDEGILMDEESWYSVTPEKVAQHIASRCKASDVVID 169
+P EI A P L KY+ QRY +SR+D+GI +D E
Sbjct: 634 LPPEIAAVPELAKYWAQRYRLFSRFDDGIKLDRE-------------------------- 667
Query: 170 GWYSVTPEKVAQHIASRCKAS---DVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRL 226
GW+SVTPEK+A+HIA R S DVV+D FCG GGNTIQFA +VI+IDIDP K+ L
Sbjct: 668 GWFSVTPEKIAEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIAL 727
Query: 227 AQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARS-SFSIDNIFPEQG 285
A++NA VYG++ KI+FI GDF LA L+ DVVFLSPPWGGP+YA + +F I +
Sbjct: 728 ARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWGGPDYATAETFDIRTMM--SP 785
Query: 286 GGRRLFQVARGISPNVGYYLPRTSDVFEIFHDSGKKG 322
G +F++++ I+ N+ Y+LPR +D+ ++ +G G
Sbjct: 786 DGFEIFRLSKKITNNIVYFLPRNADIDQVASLAGPGG 822
>sp|Q09814|TGS1_SCHPO Trimethylguanosine synthase OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=tgs1 PE=1 SV=3
Length = 239
Score = 152 bits (383), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 132/227 (58%), Gaps = 36/227 (15%)
Query: 98 LNYQEDLGDLENVPEEIWANPY---LNKYYQQRYLYWSRYDEGILMDEESWYSVTPEKVA 154
+N E+L + E + + I P L KY+ RY +SR+DEGI +D +SWYSVTPEKVA
Sbjct: 1 MNKNEELDEDELLKKCIICPPVPKALKKYWNNRYNLFSRFDEGIWLDYQSWYSVTPEKVA 60
Query: 155 QHIASRCKASDVVIDGWYSVTPEKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKV 214
IA V+D + PE ++ID F GCGGNTIQFA C V
Sbjct: 61 VAIAKS------VVD---FIQPE--------------LIIDAFSGCGGNTIQFAKYCP-V 96
Query: 215 ISIDIDPAKLRLAQHNASVYGV-SHKIQFIQGDFFALAPSLQ-----GDVVFLSPPWGGP 268
ISI+IDP K+ +A+HN +YG+ S ++ FIQGD SLQ +VF+SPPWGGP
Sbjct: 97 ISIEIDPIKIAMAKHNLEIYGIPSSRVTFIQGDVLDTFKSLQFAKDYRSLVFMSPPWGGP 156
Query: 269 EYA-RSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYLPRTSDVFEI 314
Y+ ++ +S++++ P LF+ A ISP V +LPR +DV E+
Sbjct: 157 SYSGKTVYSLNDLNPY--AFDVLFKEATRISPYVAAFLPRNTDVKEL 201
>sp|Q12052|TGS1_YEAST Trimethylguanosine synthase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=TGS1 PE=1 SV=1
Length = 315
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 111/240 (46%), Gaps = 33/240 (13%)
Query: 86 KKKRRRKKRSFELNYQEDLGDLENVPEEIWA-----NPYLNKYYQQRYLYWSRYDEG-IL 139
K K +KR N++ + L N +I + N L KY++ R +S+ D I
Sbjct: 10 KIKHAARKRKHHSNFRTLIKLLNNDAYKIESSKPLKNGKLFKYWKNRRRLFSKIDSASIY 69
Query: 140 MDEESWYSVTPEKVAQHIASRCKASDVVIDGWYSVTPEKVAQHIASRCKASDVVIDGFCG 199
M +E W+SVTPE++A +A+ KA P ++ ++D FCG
Sbjct: 70 MTDELWFSVTPERIACFLANFVKA----------CMPN------------AERILDVFCG 107
Query: 200 CGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----PSL 254
GGNTIQFA V +D + NA YGV +I +G + L +
Sbjct: 108 GGGNTIQFAMQFPYVYGVDYSIEHIYCTAKNAQSYGVDDRIWLKRGSWKKLVSKQKLSKI 167
Query: 255 QGDVVFLSPPWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYLPRTSDVFEI 314
+ D VF SPPWGGPEY R+ + G ++ + +SPNV +LPR SD+ ++
Sbjct: 168 KYDCVFGSPPWGGPEYLRNDVYDLEQHLKPMGITKMLKSFLKLSPNVIMFLPRNSDLNQL 227
>sp|Q2RFW1|PRMC_MOOTA Release factor glutamine methyltransferase OS=Moorella
thermoacetica (strain ATCC 39073) GN=prmC PE=3 SV=1
Length = 283
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 177 EKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVC----QKVISIDIDPAKLRLAQHNAS 232
E V + + R + CG G I + +V + DI PA L +AQ NA
Sbjct: 98 EVVVEAVLERLDPCESYTIADCGTGSGAIALSLAHYLPRARVYATDISPAALTVAQENAR 157
Query: 233 VYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPW 265
G++ ++ +QGDF A L+ D + +PP+
Sbjct: 158 KLGLAARVTLLQGDFLAPLRGLKLDALVANPPY 190
>sp|Q7NGN4|Y3134_GLOVI Uncharacterized RNA methyltransferase gll3134 OS=Gloeobacter
violaceus (strain PCC 7421) GN=gll3134 PE=3 SV=1
Length = 457
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 189 ASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFF 248
A V+D +CG G ++ A + V+ I+ + A+ NA + G+ + +F+ G
Sbjct: 315 AEQTVVDAYCGIGTLSLPLARAARAVVGIESHVRSVEQARQNARINGIEN-CRFLAGTVE 373
Query: 249 ALAPSLQGDVVFLSPPWGG 267
AL P L+ D+V + PP G
Sbjct: 374 ALLPDLRADIVVVDPPRKG 392
>sp|P39199|PRMB_ECOLI 50S ribosomal protein L3 glutamine methyltransferase OS=Escherichia
coli (strain K12) GN=prmB PE=1 SV=3
Length = 310
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 10/130 (7%)
Query: 178 KVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVS 237
K QHI C S GC +A +V ++DI P L +A+ N +G+
Sbjct: 131 KQPQHILDMCTGS--------GCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLI 182
Query: 238 HKIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARSSFSIDNIFPEQG--GGRRLFQVAR 295
H + I+ D F P +Q D++ +PP+ E + PE G G ++ R
Sbjct: 183 HNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYRHEPELGLASGTDGLKLTR 242
Query: 296 GISPNVGYYL 305
I N YL
Sbjct: 243 RILGNAADYL 252
>sp|P0A293|PRMB_SALTY 50S ribosomal protein L3 glutamine methyltransferase OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=prmB PE=3 SV=1
Length = 310
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 177 EKVAQHIASRCKASDVVIDGFC---GCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASV 233
E + H A I C GC +A +V ++DI P L +A+HN
Sbjct: 119 ELINNHFAGLISQQPKYILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEHNIEE 178
Query: 234 YGVSHKIQFIQGDFFALAPSLQGDVVFLSPPW 265
+G+ H + I+ D F P +Q D++ +PP+
Sbjct: 179 HGLIHHVTPIRSDLFRDLPKVQYDLIVTNPPY 210
>sp|P0A294|PRMB_SALTI 50S ribosomal protein L3 glutamine methyltransferase OS=Salmonella
typhi GN=prmB PE=3 SV=1
Length = 310
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 177 EKVAQHIASRCKASDVVIDGFC---GCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASV 233
E + H A I C GC +A +V ++DI P L +A+HN
Sbjct: 119 ELINNHFAGLISQQPKYILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEHNIEE 178
Query: 234 YGVSHKIQFIQGDFFALAPSLQGDVVFLSPPW 265
+G+ H + I+ D F P +Q D++ +PP+
Sbjct: 179 HGLIHHVTPIRSDLFRDLPKVQYDLIVTNPPY 210
>sp|Q32DK7|PRMB_SHIDS 50S ribosomal protein L3 glutamine methyltransferase OS=Shigella
dysenteriae serotype 1 (strain Sd197) GN=prmB PE=3 SV=2
Length = 310
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 10/130 (7%)
Query: 178 KVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVS 237
K QHI C S GC +A +V ++DI P L +A+ N +G+
Sbjct: 131 KQPQHILDMCTGS--------GCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLI 182
Query: 238 HKIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARSSFSIDNIFPEQG--GGRRLFQVAR 295
H + I+ D F P +Q D++ +PP+ E + PE G G ++ R
Sbjct: 183 HNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYRHEPELGLASGTDGLKLTR 242
Query: 296 GISPNVGYYL 305
I N YL
Sbjct: 243 RILGNAADYL 252
>sp|Q8ES75|Y768_OCEIH Uncharacterized RNA methyltransferase OB0768 OS=Oceanobacillus
iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 /
HTE831) GN=OB0768 PE=3 SV=1
Length = 459
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 191 DVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL 250
DVVID +CG G ++ A +KV I++ P + A+ NA + G+++ ++F G +
Sbjct: 311 DVVIDAYCGIGSISLFLAQKAKKVYGIEVVPEAIEDAKMNAEINGMNN-VEFSVGQAEKV 369
Query: 251 APS-----LQGDVVFLSPPWGG 267
P L DV+ + PP G
Sbjct: 370 MPKWKEQGLDPDVIVVDPPRKG 391
>sp|O26820|TMG10_METTH tRNA (guanine(10)-N2)-dimethyltransferase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=trmG10 PE=3 SV=1
Length = 336
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 185 SRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQ 244
S KA D ++D FCG GG I+ + +V+ DID + + N YG++ + I+
Sbjct: 183 SGVKAGDRILDPFCGTGGILIEAGLMGVRVVGADIDWRMVEGTRENLQHYGIT-DFEVIR 241
Query: 245 GDFFALAPSLQGDVVFLSPPWG 266
D L + D + PP+G
Sbjct: 242 SDARDLRLDEKVDAIVTDPPYG 263
>sp|Q5UQR2|YL320_MIMIV Uncharacterized protein L320 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L320 PE=4 SV=1
Length = 256
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 14/143 (9%)
Query: 138 ILMDEESWYSVTPEKVAQHIASRCKASDVVIDGWYSVTPEKVAQHIASRCKASD------ 191
I++D+ES +T AQ I ++++++ + R K+ D
Sbjct: 53 IMIDDESIKYITYNSSAQEI------TNIIMNNLENFPCPSHCSEEKWRLKSPDQRMKKL 106
Query: 192 VVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA 251
V+ + G GGN + FA + V +I+++ + + +N +Y S+ + L
Sbjct: 107 VITEMTAGVGGNVLNFAKYFKYVNAIELNCIRYKYLNNNIKLYDYSNVNCYNDNSVSLLI 166
Query: 252 PS--LQGDVVFLSPPWGGPEYAR 272
L D+VF PPWGG Y +
Sbjct: 167 EKDDLGQDIVFFDPPWGGGGYKQ 189
>sp|Q9KF10|Y687_BACHD Uncharacterized RNA methyltransferase BH0687 OS=Bacillus halodurans
(strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153
/ C-125) GN=BH0687 PE=3 SV=1
Length = 458
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 12/124 (9%)
Query: 171 WYSVTPE--KVAQHIA---SRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLR 225
+Y V PE KV A + S+ VID +CG G ++ A + V ++I P +
Sbjct: 287 FYQVNPEQTKVLYDQALEFANLTGSETVIDAYCGIGTISLFLAQQAKHVYGVEIVPEAIS 346
Query: 226 LAQHNASVYGVSHKIQFIQGDFFALAP-----SLQGDVVFLSPPWGGPEYARSSFSIDNI 280
A+ NA + G ++ +QF GD + P ++ DV+ + PP G + A +I N+
Sbjct: 347 DAKRNARLNGFAN-VQFAVGDAEKVMPWWYAQGVRADVIVVDPPRKGCDEALLK-TILNM 404
Query: 281 FPEQ 284
P++
Sbjct: 405 KPDR 408
>sp|Q4UJU4|RFTRM_RICFE Bifunctional methyltransferase OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=prmC/trmB PE=3 SV=1
Length = 527
Score = 45.1 bits (105), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 29/208 (13%)
Query: 119 YLNKYYQQRYLYWSRYDEGILMDEESWYSVTPEKVAQHIASRCKASDVVIDGWYSVTPEK 178
Y ++ +++ R D +L+D V K + R A ++ S TP
Sbjct: 82 YSREFIVNKHVLIPRADTEVLVD------VCVHKSSLRATKRSVAISGILSKIASSTPMA 135
Query: 179 VAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQ----KVISIDIDPAKLRLAQHNASVY 234
+SR +++ G G I + +C+ +V++ DI + +A++NA Y
Sbjct: 136 -----SSRNDEYTKILE--LGTGSGCIAISLLCELPNARVVATDISLDAIEVARNNALKY 188
Query: 235 GVSHKIQFIQGDFFALAPSLQGDVVFLSPPW----GGPEYARSSFSID---NIFPEQGGG 287
V+ +IQ I ++F + DV+ +PP+ PE A + + + +F E+ G
Sbjct: 189 HVTDRIQIIHSNWFENLGKQKFDVIVSNPPYISTDEKPEMALETLNHEPYIALFAEEDG- 247
Query: 288 RRLFQVARGISPNVGYYL-PRTSDVFEI 314
Q R I+ N +L P V EI
Sbjct: 248 ---LQAYRIIAENAKKFLKPNGKIVLEI 272
>sp|Q8KGF9|Y009_CHLTE Uncharacterized RNA methyltransferase CT0009 OS=Chlorobium tepidum
(strain ATCC 49652 / DSM 12025 / TLS) GN=CT0009 PE=3
SV=1
Length = 483
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 191 DVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFF-- 248
D V D +CG G T+ A C++ I I++ + ++ A+ NA + G+S+ + F Q D
Sbjct: 335 DTVYDLYCGTGTITLYLARHCKQAIGIEVVESAVKDAEMNAELNGLSNTV-FFQADLKNF 393
Query: 249 -----ALAPSLQGDVVFLSPPWGG 267
AL P + ++ PP G
Sbjct: 394 HAMQEALEPYAKPRIIVTDPPRAG 417
>sp|Q5XBK8|Y1070_STRP6 Uncharacterized RNA methyltransferase M6_Spy1070 OS=Streptococcus
pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
GN=M6_Spy1070 PE=3 SV=1
Length = 462
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 173 SVTPEKVAQH-IA-SRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHN 230
+V EK+ Q IA S D+VID + G G + FA + V +++ A +R AQHN
Sbjct: 297 TVMAEKLYQTAIAFSDLSKDDIVIDAYSGIGTIGLSFAKTVKAVYGVEVIEAAVRDAQHN 356
Query: 231 ASVYGVSHKIQFIQGDFFALAP----SLQGDVVFLSPPWGG 267
A++ G+++ A+A ++ V+ + PP G
Sbjct: 357 AALNGITNAYFVADTAEHAMATWAKDGIKPSVILVDPPRKG 397
>sp|P0DG15|Y1024_STRPQ Uncharacterized RNA methyltransferase SPs0836 OS=Streptococcus
pyogenes serotype M3 (strain SSI-1) GN=SPs0836 PE=3 SV=1
Length = 462
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 173 SVTPEKVAQH-IA-SRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHN 230
+V EK+ Q IA S D+VID + G G + FA + V +++ A +R AQHN
Sbjct: 297 TVMAEKLYQTAIAFSDLSKDDIVIDAYSGIGTIGLSFAKTVKAVYGVEVIEAAVRDAQHN 356
Query: 231 ASVYGVSHKIQFIQGDFFALAP----SLQGDVVFLSPPWGG 267
A++ G+++ A+A ++ V+ + PP G
Sbjct: 357 AALNGITNAYFVADTAEHAMATWAKDGIKPSVILVDPPRKG 397
>sp|P0DG14|Y1024_STRP3 Uncharacterized RNA methyltransferase SpyM3_1024 OS=Streptococcus
pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315)
GN=SpyM3_1024 PE=3 SV=1
Length = 462
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 173 SVTPEKVAQH-IA-SRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHN 230
+V EK+ Q IA S D+VID + G G + FA + V +++ A +R AQHN
Sbjct: 297 TVMAEKLYQTAIAFSDLSKDDIVIDAYSGIGTIGLSFAKTVKAVYGVEVIEAAVRDAQHN 356
Query: 231 ASVYGVSHKIQFIQGDFFALAP----SLQGDVVFLSPPWGG 267
A++ G+++ A+A ++ V+ + PP G
Sbjct: 357 AALNGITNAYFVADTAEHAMATWAKDGIKPSVILVDPPRKG 397
>sp|B3PL62|RLMD_CELJU 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD OS=Cellvibrio
japonicus (strain Ueda107) GN=rlmD PE=3 SV=1
Length = 485
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 190 SDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFA 249
+D+V+D FCG G T+ A+ +VI +++ + AQ NA+ G+ + ++F++ D
Sbjct: 332 NDLVLDFFCGMGNFTLPMASRVARVIGLEVVEPMVTRAQANATRLGLDN-LEFLKADLSQ 390
Query: 250 L-APSL-----QGDVVFLSPPWGG 267
+ +P L Q + L PP G
Sbjct: 391 MDSPRLRQLCSQASAILLDPPRDG 414
>sp|P05409|TMG10_METTL Probable tRNA (guanine(10)-N2)-dimethyltransferase (Fragment)
OS=Methanococcus thermolithotrophicus GN=trmG10 PE=3
SV=1
Length = 162
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 14/129 (10%)
Query: 185 SRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQ 244
SR K DV++D FCG GG I+ + K+I DID + N Y ++ I I+
Sbjct: 10 SRLKKGDVLLDPFCGTGGFLIEGGFMGLKLIGSDIDDDMVNGTLLNLKSYNLTEHIISIK 69
Query: 245 ----GDFFALAPSLQ---GDVVFLSPPWGGPEYARSSFSIDNIFPEQG-----GGRRLFQ 292
GD + L D + PP+G A+ +I+ IF G G +F
Sbjct: 70 KWNAGDIKSFLKQLNVKYVDGIVTDPPYGISTSAKG--NIEEIFNNLGDVLKKDGYLVFA 127
Query: 293 VARGISPNV 301
+R I+ ++
Sbjct: 128 SSRKINLDL 136
>sp|Q59043|Y1649_METJA Putative ribosomal RNA large subunit methyltransferase MJ1649
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1649
PE=3 SV=1
Length = 387
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGV-SHKIQFIQGD 246
K D V+D C GG ++ A +V+ +D+ L+LA+ N + + + +FI+G+
Sbjct: 212 KEGDRVLDICCYTGGFSVHAAIRGAEVVGVDLSKKALKLAEENIELNNIPKDRYEFIEGN 271
Query: 247 FFALAPSL-----QGDVVFLSPP 264
F + + + DVV L PP
Sbjct: 272 AFEVMKEMIEDKEKFDVVILDPP 294
>sp|Q58293|TRM5B_METJA tRNA (guanine(37)-N1)-methyltransferase Trm5b OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=trm5b PE=1 SV=1
Length = 336
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 183 IASRCKASDVVIDGFCGCGGNTIQFAAVCQ---KVISIDIDPAKLRLAQHNASVYGVSHK 239
I + +DVV+D F G G F+ C+ K+ +IDI+P + L + N + + HK
Sbjct: 189 IMKKVSLNDVVVDMFAGVG----PFSIACKNAKKIYAIDINPHAIELLKKNIKLNKLEHK 244
Query: 240 IQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARSSFSIDNIFPEQGG 286
I I D + ++G+ V ++ P ++ + I E+GG
Sbjct: 245 IIPILSDVREV--DVKGNRVIMNLPKFAHKFIDKALDI----VEEGG 285
>sp|Q47WQ1|RLMD_COLP3 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD OS=Colwellia
psychrerythraea (strain 34H / ATCC BAA-681) GN=rlmD PE=3
SV=1
Length = 469
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 189 ASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDF- 247
A+D V+D FCG G ++ A ++V+ ++ + A N+ V G+ + QF Q D
Sbjct: 321 ATDNVLDLFCGLGNFSLALAKHAKRVVGVEGMQTMVDKATQNSLVNGLDN-CQFYQADLN 379
Query: 248 --FALAPSLQGDV---VFLSPPWGGPEYARSSFS 276
+ L P +QG V V L P G E A S +
Sbjct: 380 SHWLLEPWVQGQVFDKVLLDPARAGAEQAVSQIA 413
>sp|Q8F9A3|Y292_LEPIN Uncharacterized RNA methyltransferase LA_0292 OS=Leptospira
interrogans serogroup Icterohaemorrhagiae serovar Lai
(strain 56601) GN=LA_0292 PE=3 SV=1
Length = 393
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 7/118 (5%)
Query: 168 IDGWYSVTP---EKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKL 224
+ ++ V P E + I + V+D +CG G ++ A+ +KVI ++ + + +
Sbjct: 226 LSTFFQVNPFQIENLYNLILEDLPENKCVVDAYCGIGTISLYIASKSKKVIGLEENSSSI 285
Query: 225 RLAQHNASVYGVSHKIQFIQG---DFFALAPSLQGDVVFLSPPWGGPEYARSSFSIDN 279
R A + G+ + + FI+G D A + DVV L PP G + S +++
Sbjct: 286 RSAIGASKANGIEN-VHFIKGKVLDTLRAALNENSDVVVLDPPREGLDAETKSILLNS 342
>sp|Q72VP7|Y249_LEPIC Uncharacterized RNA methyltransferase LIC_10249 OS=Leptospira
interrogans serogroup Icterohaemorrhagiae serovar
copenhageni (strain Fiocruz L1-130) GN=LIC_10249 PE=3
SV=1
Length = 393
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 7/118 (5%)
Query: 168 IDGWYSVTP---EKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKL 224
+ ++ V P E + I + V+D +CG G ++ A+ +KVI ++ + + +
Sbjct: 226 LSTFFQVNPFQIENLYNLILEDLPENKCVVDAYCGIGTISLYIASKSKKVIGLEENSSSI 285
Query: 225 RLAQHNASVYGVSHKIQFIQG---DFFALAPSLQGDVVFLSPPWGGPEYARSSFSIDN 279
R A + G+ + + FI+G D A + DVV L PP G + S +++
Sbjct: 286 RSAIGASKANGIEN-VHFIKGKVLDTLRAALNENSDVVVLDPPREGLDAETKSILLNS 342
>sp|Q9ZCB3|RFTRM_RICPR Bifunctional methyltransferase OS=Rickettsia prowazekii (strain
Madrid E) GN=prmC/trmB PE=3 SV=1
Length = 518
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 57/123 (46%), Gaps = 10/123 (8%)
Query: 153 VAQHIASRCKASDVVIDGWYSVTPEKVAQHIASRCKASDVVIDG------FCGCGGNTIQ 206
V +H+ ++V++D + + H+ S+ K+ D V+ G G I
Sbjct: 88 VNKHVLIPRIDTEVLVDVVIGLVVSRNNLHMFSKLKSLDSVLTTQSYNILELGTGSGCIA 147
Query: 207 FAAVCQ----KVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLS 262
+ +C+ +I+ DI +++A+ N+ Y V+ +IQ I ++F + D + +
Sbjct: 148 ISLLCELPNTNIIATDISVDAIKVAKSNSIKYNVTDRIQIIHSNWFEKLDKQKFDFIVSN 207
Query: 263 PPW 265
PP+
Sbjct: 208 PPY 210
>sp|A5D3Y3|PRMA_PELTS Ribosomal protein L11 methyltransferase OS=Pelotomaculum
thermopropionicum (strain DSM 13744 / JCM 10971 / SI)
GN=prmA PE=3 SV=1
Length = 308
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 199 GCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFF 248
G G + AA +V+++DIDP R+A NA GV+ K+Q +QG+
Sbjct: 178 GTGSGVLAVAAARLGAGRVVAVDIDPLACRVAAGNAERNGVAGKVQVVQGNLL 230
>sp|O26249|CBIT_METTH Probable cobalt-precorrin-6Y C(15)-methyltransferase
[decarboxylating] OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=cbiT PE=1 SV=1
Length = 192
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 190 SDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGD 246
+DV +D CG GG T++ A ++V +ID +P + + N +G+ + ++GD
Sbjct: 34 NDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGD 90
>sp|Q59047|Y1653_METJA Putative ribosomal RNA large subunit methyltransferase MJ1653
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1653
PE=3 SV=1
Length = 385
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGV-SHKIQFIQGD 246
K D V+D C GG ++ A +V+ +D+ L+LA+ N + + + +FI+G+
Sbjct: 211 KEGDRVLDICCYTGGFSVHAAIRGAEVVGVDLSKKALKLAEENMELNNIPKDRYEFIEGN 270
Query: 247 FFALAPSL-----QGDVVFLSPP 264
F + + DVV L PP
Sbjct: 271 AFKVMEEFIEDGEKFDVVILDPP 293
>sp|Q0WDE1|PRMB_YERPE 50S ribosomal protein L3 glutamine methyltransferase OS=Yersinia
pestis GN=prmB PE=3 SV=1
Length = 310
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 181 QHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKI 240
HI C S GC +A +V ++DI L + +HN +G+ H++
Sbjct: 134 NHILDMCTGS--------GCIAIACAYAFPDAEVDAVDISNDVLAVTEHNIQQHGMEHQV 185
Query: 241 QFIQGDFFALAPSLQGDVVFLSPPW 265
I+ D F P ++ D++ +PP+
Sbjct: 186 TPIRSDLFRDLPPIKYDLIVTNPPY 210
>sp|Q8YR05|Y3654_NOSS1 Uncharacterized RNA methyltransferase alr3654 OS=Nostoc sp. (strain
PCC 7120 / UTEX 2576) GN=alr3654 PE=3 SV=1
Length = 460
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 172 YSVTPEKVAQHIASRC--KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQH 229
++ T E + Q I S+ + + +ID +CG G T+ + ++ I +++ P ++ A
Sbjct: 290 FTETAEALLQVIESQLNLQGHETLIDAYCGIGTLTLPLSKQVRQAIGLELQPEAVQQAIV 349
Query: 230 NASVYGVSHKIQFIQGDFFALAPSLQ--GDVVFLSPPWGG 267
NA G+++ ++F G L P + DVV L PP G
Sbjct: 350 NAQHNGINN-VEFQVGAVEKLLPKMGIIPDVVLLDPPRKG 388
>sp|Q830R6|Y2706_ENTFA Uncharacterized RNA methyltransferase EF_2706 OS=Enterococcus
faecalis (strain ATCC 700802 / V583) GN=EF_2706 PE=3
SV=1
Length = 456
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 21/144 (14%)
Query: 138 ILMDEESWYSVTPEKVAQHIASRCKASDVVID----GWYSVTPEKVAQHIASRCKASDV- 192
++M +++ + E + +HI +DVV D ++ + PE+ KA D+
Sbjct: 256 LVMGDDTLHLWGKESIEEHI------NDVVFDLSPRAFFQLNPEQTEVLYNEGIKALDLQ 309
Query: 193 ----VIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFF 248
V+D +CG G + A +V +D PA + A+ NA GV++ + G
Sbjct: 310 PNETVVDAYCGVGTIGLSLAKQAHQVRGMDTIPAAIDDARFNAKRLGVTN-THYAVGTAE 368
Query: 249 ALAPS-----LQGDVVFLSPPWGG 267
L P + D + + PP G
Sbjct: 369 DLLPKWFKEGFKPDAIVVDPPRTG 392
>sp|P73374|Y1967_SYNY3 Uncharacterized RNA methyltransferase sll1967 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=sll1967 PE=3 SV=1
Length = 463
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 184 ASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFI 243
A + +++++D + G G T+ A ++ I+I+++ + Q NA + +++ + F+
Sbjct: 311 ALNLQGAELLVDAYAGVGTFTLPLARQVRQAIAIEVNQDSVHQGQRNAEINQIAN-VDFL 369
Query: 244 QGDFFALAPSLQ--GDVVFLSPPWGG--PEYAR 272
G + P+L DV+ L PP G PE R
Sbjct: 370 AGTVETVLPTLSEIPDVLLLDPPRKGCAPEVLR 402
>sp|Q7U6V8|Y1228_SYNPX Uncharacterized RNA methyltransferase SYNW1228 OS=Synechococcus sp.
(strain WH8102) GN=SYNW1228 PE=3 SV=1
Length = 465
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 35/66 (53%)
Query: 185 SRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQ 244
S+ + + ++D +CG G ++ AA V+ ++I+P + A+ NA G+ + +F
Sbjct: 312 SQAELAGPIVDAYCGIGTISLPLAAQGHHVVGLEINPDSIDQARSNADANGLGARTEFQA 371
Query: 245 GDFFAL 250
GD L
Sbjct: 372 GDVANL 377
>sp|Q74N58|Y053_NANEQ Uncharacterized RNA methyltransferase NEQ053 OS=Nanoarchaeum
equitans (strain Kin4-M) GN=NEQ053 PE=3 SV=1
Length = 447
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 190 SDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFA 249
+DVV+D + G G ++Q A +KVI I+I + +A+ NAS+ + +FI
Sbjct: 306 NDVVLDLYSGVGLFSLQIANEVKKVIGIEIVEEAVEMAKLNASINNIDA--EFIASP-VE 362
Query: 250 LAPSLQGDVVFLSPPWGG 267
AP ++ + + + PP G
Sbjct: 363 KAPIIKANKIIVDPPRAG 380
>sp|B2FJ58|RLMKL_STRMK Ribosomal RNA large subunit methyltransferase K/L
OS=Stenotrophomonas maltophilia (strain K279a) GN=rlmL
PE=3 SV=1
Length = 712
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 207 FAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL-APSLQGDVVFLSPPW 265
AA+ + DIDP ++ A+ NA V GV+H I+F + D L AP + V +PP+
Sbjct: 255 LAALKPVIHGSDIDPTAIQAARENAEVAGVAHAIRFTRADVADLAAPEQEIGAVVCNPPY 314
>sp|B1XU70|RLMD_POLNS 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
OS=Polynucleobacter necessarius subsp. necessarius
(strain STIR1) GN=rlmD PE=3 SV=1
Length = 475
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDF 247
+ +D V+D FCG G T+ A ++V+ I+ + A+ NA G+S K F+Q D
Sbjct: 319 QPTDRVLDLFCGIGNFTLPLARKAKQVLGIEGLESLTARAKSNAQHNGLSDKASFMQSDL 378
Query: 248 FALAPSLQGDVVFLSPPWGGPE 269
F + WGG E
Sbjct: 379 FEVTSETVAS-------WGGAE 393
>sp|B4SQ79|RLMKL_STRM5 Ribosomal RNA large subunit methyltransferase K/L
OS=Stenotrophomonas maltophilia (strain R551-3) GN=rlmL
PE=3 SV=1
Length = 712
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 207 FAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL-APSLQGDVVFLSPPW 265
AA+ + DIDP ++ A+ NA V GV+H I+F + D L AP + V +PP+
Sbjct: 255 LAALKPVIHGSDIDPTAIQAARENAEVAGVAHAIRFTRADVADLAAPEQEIGAVVCNPPY 314
>sp|Q8ZZA9|CBIT_PYRAE Probable cobalt-precorrin-6Y C(15)-methyltransferase
[decarboxylating] OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=cbiT
PE=3 SV=1
Length = 196
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 186 RCKASDVVIDGFCGCGGNTIQFAAVC---QKVISIDIDPAKLRLAQHNASVYGVSHKIQF 242
R ++D CG G +++ A + KV +ID DP + + + NA+ +GV ++
Sbjct: 37 RLIKGGTLVDVGCGTGTISVEAALIMGEGSKVYAIDKDPLAVEITKKNAAKFGVGDRLIV 96
Query: 243 IQGDFFALAPSL 254
+GD L P L
Sbjct: 97 AEGDALELLPKL 108
>sp|Q9UY84|TMG10_PYRAB tRNA (guanine(10)-N2)-dimethyltransferase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=trmG10 PE=1 SV=2
Length = 329
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 176 PEKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYG 235
P ++A+ + + +A+ ++D F G GG I+ + KV IDI + A+ N YG
Sbjct: 166 PPRIARAMVNLTRATREILDPFMGTGGMLIEAGLMGLKVYGIDIREDMVEGAKINLEYYG 225
Query: 236 VSHKIQFIQGDFFALAPSLQG---DVVFLSPPWG 266
V + + GD + + G + + PP+G
Sbjct: 226 VKDYVVKV-GDATKIKEAFPGKTFEAIATDPPYG 258
>sp|Q54QK7|DIM1_DICDI Probable dimethyladenosine transferase OS=Dictyostelium discoideum
GN=dimt1 PE=3 SV=1
Length = 314
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 185 SRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQ 244
S+ K++D V++ G G T++ C+KVI+I++DP Q + + +Q I
Sbjct: 51 SQLKSTDTVLEIGPGTGNLTMKLLENCKKVIAIEVDPRMAAELQKRVAASPYAQHLQIIL 110
Query: 245 GDFF 248
GDF
Sbjct: 111 GDFL 114
>sp|A5UJR5|CBIT_METS3 Probable cobalt-precorrin-6Y C(15)-methyltransferase
[decarboxylating] OS=Methanobrevibacter smithii (strain
PS / ATCC 35061 / DSM 861) GN=cbiT PE=3 SV=1
Length = 187
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 185 SRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQ 244
S +D V+D CG GG T +FA +KV SID +P + + + N + + ++ I
Sbjct: 29 SAVTPNDEVVDVGCGTGGITCEFAQRAKKVTSIDTNPDAISVTKQNLEKFNLGDNVELIN 88
>sp|F6CY50|RLMD_MARPP 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD OS=Marinomonas
posidonica (strain CECT 7376 / NCIMB 14433 /
IVIA-Po-181) GN=rlmD PE=3 SV=1
Length = 438
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 29/164 (17%)
Query: 119 YLNKYYQQRY-LYW-----SRYDEGILMDEE-SWYSVTPEKVAQHIASRCKASDVVIDGW 171
YL+ QQ LYW SR D L DE+ +Y V+ ++ H + ++ +
Sbjct: 224 YLDWAQQQDVELYWQAPKASRAD---LTDEQMRYYDVSNLRLKYHPQDFIQINEFM---- 276
Query: 172 YSVTPEKVAQHIASRC-KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHN 230
+ VAQ +A + D V+D FCG G ++ A + VI +++ + ++ +HN
Sbjct: 277 ---NQKMVAQAMAWLAPQKDDTVLDLFCGVGNFSLPLAQLAGSVIGVELQESMVQAGRHN 333
Query: 231 ASVYGVSHKIQFIQGDFFALAPSLQG-------DVVFLSPPWGG 267
AS+ G+ + + F+ D L + G + + L PP G
Sbjct: 334 ASLNGLKN-LSFVAAD---LTQPVAGQFSAENINKILLDPPRAG 373
>sp|Q8P0H4|Y1360_STRP8 Uncharacterized RNA methyltransferase spyM18_1360 OS=Streptococcus
pyogenes serotype M18 (strain MGAS8232) GN=spyM18_1360
PE=3 SV=1
Length = 462
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 173 SVTPEKVAQH-IA-SRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHN 230
+V EK+ Q IA S D+VID + G G + FA + V +++ A +R AQ N
Sbjct: 297 TVMAEKLYQTAIAFSDLSKDDIVIDAYSGIGTIGLSFAKTVKAVYGVEVIEAAVRDAQQN 356
Query: 231 ASVYGVSHKIQFIQGDFFALAP----SLQGDVVFLSPPWGG 267
A++ G+++ A+A ++ V+ + PP G
Sbjct: 357 AALNGITNAYFVADTAEHAMATWAKDGIKPSVILVDPPRKG 397
>sp|Q99Z86|Y1346_STRP1 Uncharacterized RNA methyltransferase SPy_1346/M5005_Spy1098
OS=Streptococcus pyogenes serotype M1 GN=SPy_1346 PE=3
SV=1
Length = 462
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 173 SVTPEKVAQH-IA-SRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHN 230
+V EK+ Q IA S D+VID + G G + FA + V +++ A +R AQ N
Sbjct: 297 TVMAEKLYQTAIAFSDLSKDDIVIDAYSGIGTIGLSFAKTVKAVYGVEVIEAAVRDAQQN 356
Query: 231 ASVYGVSHKIQFIQGDFFALAP----SLQGDVVFLSPPWGG 267
A++ G+++ A+A ++ V+ + PP G
Sbjct: 357 AALNGITNAYFVADTAEHAMATWAKDGIKPSVILVDPPRKG 397
>sp|B8F6T6|PRMA_HAEPS Ribosomal protein L11 methyltransferase OS=Haemophilus parasuis
serovar 5 (strain SH0165) GN=prmA PE=3 SV=1
Length = 294
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 199 GCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQF 242
GCG + AA+ +K I IDIDP + +Q+NA V GV+ ++Q
Sbjct: 166 GCGSGILAIAALKLGAKKAIGIDIDPQAILASQNNAEVNGVADRLQL 212
>sp|Q2SL27|RLMD_HAHCH 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD OS=Hahella
chejuensis (strain KCTC 2396) GN=rlmD PE=3 SV=1
Length = 446
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Query: 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDF 247
+A + ++D FCG G T+ A V+ ++ +R NA + G+S+ ++F D
Sbjct: 295 QAGETILDLFCGLGNFTLPIARSAAHVVGVEGSEDMVRRGYANAELNGISN-VEFHAADL 353
Query: 248 -FALAPSLQG--------DVVFLSPPWGGPE 269
LAP+ + D V L PP G E
Sbjct: 354 HLPLAPAKEAKHAWLRTYDKVLLDPPRSGAE 384
>sp|Q1II29|PRMC_KORVE Release factor glutamine methyltransferase OS=Koribacter versatilis
(strain Ellin345) GN=prmC PE=3 SV=1
Length = 280
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 199 GCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFF-ALAPSLQGD 257
GC T+ KV ++DI P L++AQ NA+ + +++F D A+ P Q D
Sbjct: 124 GCIAATLAKEFPRMKVTAVDISPEALQIAQANAA--RLEAQVEFRVSDLLSAIEPGRQFD 181
Query: 258 VVFLSPPWGGP-EYARSSFSIDNIFPEQG--GGRRLFQVARGISPNVGYYL 305
++ +PP+ G E + + + P GG R + + ++P V +L
Sbjct: 182 MIVSNPPYVGECEADKVQRQVKDFEPHCAVFGGERGMDIIKRLAPQVWEHL 232
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,007,934
Number of Sequences: 539616
Number of extensions: 5638312
Number of successful extensions: 16275
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 279
Number of HSP's that attempted gapping in prelim test: 16089
Number of HSP's gapped (non-prelim): 432
length of query: 342
length of database: 191,569,459
effective HSP length: 118
effective length of query: 224
effective length of database: 127,894,771
effective search space: 28648428704
effective search space used: 28648428704
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)