Query psy15742
Match_columns 342
No_of_seqs 432 out of 3392
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 20:14:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15742.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15742hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gdh_A Trimethylguanosine synt 99.9 2.1E-23 7.1E-28 186.0 16.4 192 108-324 20-212 (241)
2 2jjq_A Uncharacterized RNA met 99.8 1.3E-20 4.5E-25 181.5 16.4 149 169-342 268-421 (425)
3 3bt7_A TRNA (uracil-5-)-methyl 99.8 3.5E-21 1.2E-25 182.7 11.6 152 169-342 189-363 (369)
4 1uwv_A 23S rRNA (uracil-5-)-me 99.8 2.2E-20 7.6E-25 180.8 15.4 153 170-342 262-426 (433)
5 3ll7_A Putative methyltransfer 99.7 9.1E-17 3.1E-21 152.9 12.1 153 136-319 65-223 (410)
6 3v97_A Ribosomal RNA large sub 99.6 4.4E-16 1.5E-20 158.7 11.4 146 189-340 539-695 (703)
7 2b78_A Hypothetical protein SM 99.6 2.5E-15 8.6E-20 143.1 13.9 80 188-267 211-297 (385)
8 3ldg_A Putative uncharacterize 99.6 4.4E-16 1.5E-20 147.9 8.3 120 188-315 193-352 (384)
9 1nv8_A HEMK protein; class I a 99.6 6E-15 2.1E-19 134.8 15.0 127 189-318 123-261 (284)
10 3p9n_A Possible methyltransfer 99.6 6.8E-16 2.3E-20 132.2 7.8 79 189-268 44-126 (189)
11 3k0b_A Predicted N6-adenine-sp 99.6 4E-15 1.4E-19 141.9 13.0 120 188-315 200-359 (393)
12 3lpm_A Putative methyltransfer 99.6 7.7E-15 2.6E-19 132.1 13.5 146 189-334 49-205 (259)
13 3ldu_A Putative methylase; str 99.6 6.4E-15 2.2E-19 140.2 12.5 120 188-315 194-353 (385)
14 3a27_A TYW2, uncharacterized p 99.6 5.4E-15 1.8E-19 134.3 11.0 78 187-265 117-196 (272)
15 2frn_A Hypothetical protein PH 99.6 9.9E-15 3.4E-19 132.9 12.1 84 184-267 120-204 (278)
16 2fhp_A Methylase, putative; al 99.6 1.9E-15 6.5E-20 128.5 6.6 79 189-267 44-128 (187)
17 2ift_A Putative methylase HI07 99.6 2.3E-15 7.8E-20 130.5 7.2 78 189-266 53-136 (201)
18 3tm4_A TRNA (guanine N2-)-meth 99.6 8.9E-15 3.1E-19 138.8 11.7 82 187-268 215-299 (373)
19 3k6r_A Putative transferase PH 99.6 1.3E-14 4.4E-19 131.6 11.8 88 182-269 118-206 (278)
20 2igt_A SAM dependent methyltra 99.6 6E-15 2.1E-19 137.7 9.0 81 188-268 152-238 (332)
21 2b3t_A Protein methyltransfera 99.5 5.8E-14 2E-18 127.5 14.0 88 181-269 100-190 (276)
22 3c0k_A UPF0064 protein YCCW; P 99.5 4.2E-14 1.4E-18 135.2 13.7 135 188-328 219-370 (396)
23 2yx1_A Hypothetical protein MJ 99.5 2.6E-14 9E-19 133.6 11.8 83 183-268 189-271 (336)
24 2fpo_A Methylase YHHF; structu 99.5 2.6E-14 8.9E-19 123.9 9.9 78 189-267 54-134 (202)
25 1ws6_A Methyltransferase; stru 99.5 8.5E-15 2.9E-19 122.5 6.6 76 189-266 41-121 (171)
26 3evz_A Methyltransferase; NYSG 99.5 1.7E-13 5.7E-18 120.7 14.9 82 186-269 52-137 (230)
27 1wy7_A Hypothetical protein PH 99.5 8.6E-14 2.9E-18 120.5 12.0 76 189-268 49-125 (207)
28 3tma_A Methyltransferase; thum 99.5 5.7E-14 2E-18 132.2 11.7 91 177-268 189-285 (354)
29 2h1r_A Dimethyladenosine trans 99.5 5.2E-14 1.8E-18 129.5 10.3 79 188-268 41-119 (299)
30 2h00_A Methyltransferase 10 do 99.5 1.4E-13 4.8E-18 123.2 12.9 81 189-269 65-154 (254)
31 3mti_A RRNA methylase; SAM-dep 99.5 1.2E-13 4E-18 117.5 11.6 84 183-267 16-101 (185)
32 2ozv_A Hypothetical protein AT 99.5 1.1E-13 3.6E-18 124.9 11.5 81 188-268 35-128 (260)
33 2esr_A Methyltransferase; stru 99.5 5.1E-14 1.7E-18 118.9 8.7 78 189-266 31-111 (177)
34 1wxx_A TT1595, hypothetical pr 99.5 1.2E-13 4.1E-18 131.4 11.6 110 189-305 209-323 (382)
35 2as0_A Hypothetical protein PH 99.5 6.7E-14 2.3E-18 133.8 9.9 82 188-269 216-303 (396)
36 3dxy_A TRNA (guanine-N(7)-)-me 99.5 1.2E-13 3.9E-18 121.4 10.5 142 189-340 34-185 (218)
37 4dmg_A Putative uncharacterize 99.5 1.7E-13 5.7E-18 130.6 12.2 80 187-268 212-293 (393)
38 4dcm_A Ribosomal RNA large sub 99.5 3.5E-13 1.2E-17 127.7 14.4 80 189-268 222-305 (375)
39 3dmg_A Probable ribosomal RNA 99.5 2.6E-13 8.8E-18 128.9 13.2 78 189-268 233-311 (381)
40 1pjz_A Thiopurine S-methyltran 99.5 5.6E-14 1.9E-18 121.9 7.9 144 188-335 21-181 (203)
41 3q87_B N6 adenine specific DNA 99.5 3.6E-13 1.2E-17 113.4 11.7 136 178-331 12-150 (170)
42 3v97_A Ribosomal RNA large sub 99.5 1.1E-13 3.7E-18 141.1 9.3 81 188-268 189-316 (703)
43 4dzr_A Protein-(glutamine-N5) 99.4 2.7E-14 9.1E-19 123.8 3.7 89 179-269 17-115 (215)
44 4gek_A TRNA (CMO5U34)-methyltr 99.4 6.5E-13 2.2E-17 119.8 12.5 93 171-264 52-148 (261)
45 2f8l_A Hypothetical protein LM 99.4 3.4E-13 1.2E-17 126.5 10.0 77 189-267 130-213 (344)
46 1o9g_A RRNA methyltransferase; 99.4 2.5E-13 8.5E-18 121.4 8.7 81 189-269 51-182 (250)
47 1dus_A MJ0882; hypothetical pr 99.4 1.6E-12 5.5E-17 110.5 13.2 79 189-267 52-131 (194)
48 2r6z_A UPF0341 protein in RSP 99.4 7.8E-14 2.7E-18 125.5 5.0 81 188-268 82-174 (258)
49 3eey_A Putative rRNA methylase 99.4 8.8E-13 3E-17 113.2 11.3 81 185-265 18-103 (197)
50 3hem_A Cyclopropane-fatty-acyl 99.4 4.4E-13 1.5E-17 123.1 9.8 79 188-268 71-150 (302)
51 3e05_A Precorrin-6Y C5,15-meth 99.4 1.3E-12 4.4E-17 113.0 11.7 79 187-266 38-119 (204)
52 3kr9_A SAM-dependent methyltra 99.4 7.8E-13 2.7E-17 116.1 10.0 130 181-327 7-140 (225)
53 2gb4_A Thiopurine S-methyltran 99.4 1.2E-12 4.2E-17 117.3 11.6 143 188-334 67-231 (252)
54 3gnl_A Uncharacterized protein 99.4 7.9E-13 2.7E-17 117.3 9.8 81 181-261 13-96 (244)
55 3lec_A NADB-rossmann superfami 99.4 9.3E-13 3.2E-17 115.9 10.0 130 181-327 13-146 (230)
56 3lbf_A Protein-L-isoaspartate 99.4 2.5E-12 8.6E-17 111.5 12.4 134 188-341 76-210 (210)
57 3njr_A Precorrin-6Y methylase; 99.4 3.6E-12 1.2E-16 110.6 12.7 77 188-264 54-131 (204)
58 1ne2_A Hypothetical protein TA 99.4 1.3E-12 4.5E-17 112.5 9.7 74 188-269 50-124 (200)
59 3kkz_A Uncharacterized protein 99.4 1.5E-12 5.1E-17 117.3 10.3 96 188-283 45-142 (267)
60 3bzb_A Uncharacterized protein 99.4 6.7E-12 2.3E-16 114.3 14.7 80 188-267 78-176 (281)
61 1dl5_A Protein-L-isoaspartate 99.4 1.8E-12 6.1E-17 120.2 10.8 136 188-341 74-214 (317)
62 3gru_A Dimethyladenosine trans 99.4 3.6E-12 1.2E-16 116.6 12.6 78 188-268 49-127 (295)
63 3f4k_A Putative methyltransfer 99.4 2.1E-12 7.3E-17 115.3 10.8 82 188-269 45-128 (257)
64 1nkv_A Hypothetical protein YJ 99.4 2.3E-12 7.9E-17 115.0 11.0 79 188-266 35-114 (256)
65 2kw5_A SLR1183 protein; struct 99.4 1.8E-12 6.3E-17 111.5 9.6 142 184-331 25-172 (202)
66 3lcc_A Putative methyl chlorid 99.4 6.2E-12 2.1E-16 111.0 13.2 79 190-268 67-145 (235)
67 3grz_A L11 mtase, ribosomal pr 99.4 6.2E-12 2.1E-16 108.6 12.5 84 181-266 52-136 (205)
68 3m70_A Tellurite resistance pr 99.3 1.3E-11 4.5E-16 112.2 14.9 79 189-269 120-198 (286)
69 3mb5_A SAM-dependent methyltra 99.3 1.7E-12 5.8E-17 116.1 8.8 78 187-264 91-171 (255)
70 2yxd_A Probable cobalt-precorr 99.3 4.7E-12 1.6E-16 106.7 10.9 76 188-264 34-109 (183)
71 3hm2_A Precorrin-6Y C5,15-meth 99.3 8.4E-12 2.9E-16 104.9 12.4 79 188-267 24-106 (178)
72 2yvl_A TRMI protein, hypotheti 99.3 7.6E-12 2.6E-16 111.1 12.6 77 188-264 90-167 (248)
73 1zq9_A Probable dimethyladenos 99.3 3.5E-12 1.2E-16 116.4 10.6 80 188-268 27-106 (285)
74 2okc_A Type I restriction enzy 99.3 2.7E-12 9.3E-17 124.4 10.4 95 175-269 155-267 (445)
75 2nxc_A L11 mtase, ribosomal pr 99.3 2.5E-12 8.4E-17 115.5 9.0 88 177-266 108-195 (254)
76 2fk8_A Methoxy mycolic acid sy 99.3 3.5E-12 1.2E-16 117.9 10.1 79 188-268 89-168 (318)
77 1kpg_A CFA synthase;, cyclopro 99.3 2.2E-12 7.6E-17 117.3 8.4 79 188-268 63-142 (287)
78 1ixk_A Methyltransferase; open 99.3 5.6E-12 1.9E-16 116.8 11.0 84 187-271 116-203 (315)
79 2ipx_A RRNA 2'-O-methyltransfe 99.3 4.6E-12 1.6E-16 111.9 9.9 143 188-339 76-226 (233)
80 3uwp_A Histone-lysine N-methyl 99.3 1.6E-12 5.4E-17 122.9 7.0 94 175-268 157-265 (438)
81 3ajd_A Putative methyltransfer 99.3 2.9E-12 1E-16 116.3 8.6 82 187-269 81-170 (274)
82 3lkd_A Type I restriction-modi 99.3 4.5E-12 1.5E-16 125.3 10.5 94 175-268 201-310 (542)
83 3ntv_A MW1564 protein; rossman 99.3 5.8E-12 2E-16 111.3 10.1 78 189-266 71-153 (232)
84 3orh_A Guanidinoacetate N-meth 99.3 3.4E-12 1.2E-16 113.3 8.4 77 188-266 59-139 (236)
85 1ve3_A Hypothetical protein PH 99.3 1.6E-11 5.4E-16 107.4 12.4 83 180-264 29-112 (227)
86 2b9e_A NOL1/NOP2/SUN domain fa 99.3 1.2E-11 3.9E-16 114.2 11.9 85 187-272 100-191 (309)
87 4hg2_A Methyltransferase type 99.3 9.3E-13 3.2E-17 118.5 4.4 86 177-269 27-113 (257)
88 1yzh_A TRNA (guanine-N(7)-)-me 99.3 1E-11 3.6E-16 108.1 11.0 133 189-329 41-181 (214)
89 2xvm_A Tellurite resistance pr 99.3 1.1E-11 3.6E-16 106.1 10.5 79 189-268 32-110 (199)
90 3u81_A Catechol O-methyltransf 99.3 8.1E-12 2.8E-16 109.4 10.0 78 189-266 58-145 (221)
91 4htf_A S-adenosylmethionine-de 99.3 4.5E-12 1.5E-16 115.2 8.6 81 188-268 67-149 (285)
92 3dr5_A Putative O-methyltransf 99.3 1.1E-11 3.9E-16 108.8 10.8 89 178-266 43-140 (221)
93 3vc1_A Geranyl diphosphate 2-C 99.3 5.7E-12 1.9E-16 116.3 9.2 81 188-268 116-198 (312)
94 3bus_A REBM, methyltransferase 99.3 1.1E-11 3.9E-16 111.6 11.0 81 188-268 60-142 (273)
95 1l3i_A Precorrin-6Y methyltran 99.3 2.4E-11 8.1E-16 103.0 12.3 79 188-266 32-111 (192)
96 3m6w_A RRNA methylase; rRNA me 99.3 4.8E-12 1.6E-16 122.6 8.9 84 187-272 99-187 (464)
97 3fzg_A 16S rRNA methylase; met 99.3 9E-12 3.1E-16 105.7 9.4 86 177-264 37-124 (200)
98 3tqs_A Ribosomal RNA small sub 99.3 6.7E-12 2.3E-16 112.6 9.2 77 188-268 28-109 (255)
99 1jsx_A Glucose-inhibited divis 99.3 1.3E-11 4.6E-16 106.5 10.7 120 189-329 65-187 (207)
100 3m4x_A NOL1/NOP2/SUN family pr 99.3 4.7E-12 1.6E-16 122.4 8.6 85 187-272 103-192 (456)
101 3dlc_A Putative S-adenosyl-L-m 99.3 1.2E-11 4.2E-16 107.1 10.5 78 191-268 45-124 (219)
102 3duw_A OMT, O-methyltransferas 99.3 4E-12 1.4E-16 111.3 7.2 77 189-265 58-143 (223)
103 1zx0_A Guanidinoacetate N-meth 99.3 1.1E-11 3.9E-16 109.6 10.1 73 188-262 59-135 (236)
104 2oyr_A UPF0341 protein YHIQ; a 99.3 4.3E-12 1.5E-16 113.9 7.3 81 188-268 85-177 (258)
105 1jg1_A PIMT;, protein-L-isoasp 99.3 9E-12 3.1E-16 110.2 8.6 135 188-340 90-226 (235)
106 3dh0_A SAM dependent methyltra 99.3 1.3E-11 4.5E-16 107.4 9.4 80 188-268 36-119 (219)
107 1o54_A SAM-dependent O-methylt 99.3 8.8E-12 3E-16 113.1 8.5 78 187-264 110-190 (277)
108 3axs_A Probable N(2),N(2)-dime 99.3 6.3E-12 2.1E-16 119.3 7.8 77 188-264 51-134 (392)
109 1fbn_A MJ fibrillarin homologu 99.3 2.7E-11 9.3E-16 106.8 11.4 74 188-264 73-152 (230)
110 1yb2_A Hypothetical protein TA 99.3 1.1E-11 3.7E-16 112.5 8.7 77 187-264 108-188 (275)
111 3tfw_A Putative O-methyltransf 99.3 2.4E-11 8.3E-16 108.5 10.8 76 189-264 63-145 (248)
112 3ocj_A Putative exported prote 99.3 5.1E-12 1.7E-16 116.3 6.5 88 181-268 110-200 (305)
113 3fut_A Dimethyladenosine trans 99.2 3.4E-11 1.1E-15 108.9 11.6 78 187-269 45-124 (271)
114 2yxe_A Protein-L-isoaspartate 99.2 2.5E-11 8.6E-16 105.5 10.4 131 188-340 76-212 (215)
115 3tr6_A O-methyltransferase; ce 99.2 1.8E-11 6.1E-16 107.2 9.5 76 189-264 64-149 (225)
116 2fca_A TRNA (guanine-N(7)-)-me 99.2 3.4E-11 1.2E-15 105.0 11.2 130 189-328 38-177 (213)
117 1m6y_A S-adenosyl-methyltransf 99.2 1.4E-11 4.9E-16 113.0 9.1 78 188-267 25-110 (301)
118 2y1w_A Histone-arginine methyl 99.2 2.6E-11 8.9E-16 113.8 11.0 80 188-268 49-129 (348)
119 2pjd_A Ribosomal RNA small sub 99.2 2.2E-11 7.6E-16 114.0 10.5 76 189-267 196-273 (343)
120 2frx_A Hypothetical protein YE 99.2 2.9E-11 1E-15 117.9 11.6 82 189-271 117-203 (479)
121 2qm3_A Predicted methyltransfe 99.2 3.3E-11 1.1E-15 114.2 11.7 78 189-268 172-254 (373)
122 4df3_A Fibrillarin-like rRNA/T 99.2 2.9E-11 9.9E-16 106.7 10.4 140 187-336 75-223 (233)
123 2dul_A N(2),N(2)-dimethylguano 99.2 2.8E-11 9.7E-16 114.6 11.0 78 189-267 47-143 (378)
124 3g5t_A Trans-aconitate 3-methy 99.2 1.2E-11 4E-16 113.4 8.1 91 178-268 24-126 (299)
125 2o57_A Putative sarcosine dime 99.2 1.7E-11 5.9E-16 112.0 9.1 80 188-267 81-162 (297)
126 1sui_A Caffeoyl-COA O-methyltr 99.2 1E-11 3.4E-16 111.0 7.3 76 189-264 79-165 (247)
127 3fpf_A Mtnas, putative unchara 99.2 3.3E-11 1.1E-15 109.7 10.7 75 186-262 119-195 (298)
128 2ih2_A Modification methylase 99.2 1E-11 3.5E-16 119.1 7.6 84 176-269 24-112 (421)
129 3khk_A Type I restriction-modi 99.2 1.4E-11 4.7E-16 122.0 8.5 96 174-269 228-343 (544)
130 3q7e_A Protein arginine N-meth 99.2 1.7E-11 5.9E-16 115.1 8.6 79 188-267 65-145 (349)
131 3l8d_A Methyltransferase; stru 99.2 3.4E-11 1.2E-15 106.3 10.1 87 178-268 42-129 (242)
132 4hc4_A Protein arginine N-meth 99.2 2.5E-11 8.4E-16 114.6 9.6 75 189-264 83-158 (376)
133 2pwy_A TRNA (adenine-N(1)-)-me 99.2 4.2E-11 1.4E-15 106.9 10.7 77 187-264 94-175 (258)
134 2yxl_A PH0851 protein, 450AA l 99.2 6.3E-11 2.2E-15 114.9 12.7 85 187-272 257-347 (450)
135 3h2b_A SAM-dependent methyltra 99.2 3.7E-11 1.3E-15 103.4 9.9 73 190-268 42-115 (203)
136 1vl5_A Unknown conserved prote 99.2 2.2E-11 7.5E-16 109.1 8.4 79 188-267 36-115 (260)
137 3pfg_A N-methyltransferase; N, 99.2 1.2E-11 4.1E-16 111.0 6.6 82 181-268 42-124 (263)
138 1i1n_A Protein-L-isoaspartate 99.2 2.9E-11 1E-15 105.9 8.9 81 187-267 75-163 (226)
139 1qam_A ERMC' methyltransferase 99.2 5.8E-11 2E-15 105.9 10.7 76 188-267 29-106 (244)
140 2pxx_A Uncharacterized protein 99.2 4.6E-11 1.6E-15 103.2 9.6 82 183-267 36-119 (215)
141 3e23_A Uncharacterized protein 99.2 1.6E-11 5.4E-16 106.4 6.6 78 184-268 38-115 (211)
142 2ar0_A M.ecoki, type I restric 99.2 3.3E-11 1.1E-15 119.3 9.6 95 175-269 153-275 (541)
143 3jwg_A HEN1, methyltransferase 99.2 3E-11 1E-15 105.3 8.2 80 189-268 29-115 (219)
144 3r0q_C Probable protein argini 99.2 7.8E-11 2.7E-15 111.7 11.6 76 188-264 62-138 (376)
145 3jwh_A HEN1; methyltransferase 99.2 9E-11 3.1E-15 102.2 11.1 80 189-268 29-115 (217)
146 3dtn_A Putative methyltransfer 99.2 2.6E-11 8.9E-16 106.7 7.7 79 188-269 43-123 (234)
147 2fyt_A Protein arginine N-meth 99.2 1E-10 3.5E-15 109.4 12.2 78 188-266 63-143 (340)
148 3b3j_A Histone-arginine methyl 99.2 8.4E-11 2.9E-15 114.8 11.8 76 189-265 158-234 (480)
149 3g89_A Ribosomal RNA small sub 99.2 4.5E-11 1.6E-15 106.9 9.0 73 189-262 80-158 (249)
150 1xxl_A YCGJ protein; structura 99.2 2.8E-11 9.7E-16 107.2 7.5 80 187-267 19-99 (239)
151 2p7i_A Hypothetical protein; p 99.2 7.6E-11 2.6E-15 104.1 10.0 74 189-267 42-115 (250)
152 1r18_A Protein-L-isoaspartate( 99.2 2.4E-11 8.1E-16 106.8 6.7 80 187-267 82-175 (227)
153 3i9f_A Putative type 11 methyl 99.2 3.1E-11 1.1E-15 100.8 7.0 133 187-331 15-149 (170)
154 1wzn_A SAM-dependent methyltra 99.2 1.8E-10 6.2E-15 102.4 12.4 73 188-262 40-112 (252)
155 2avd_A Catechol-O-methyltransf 99.2 4.2E-11 1.4E-15 105.1 8.1 78 188-265 68-155 (229)
156 3d2l_A SAM-dependent methyltra 99.2 1.6E-10 5.3E-15 102.0 11.8 82 179-263 23-104 (243)
157 2pbf_A Protein-L-isoaspartate 99.2 8E-11 2.7E-15 103.2 9.7 81 187-267 78-174 (227)
158 3m33_A Uncharacterized protein 99.2 1.1E-10 3.9E-15 102.4 10.7 72 186-263 45-119 (226)
159 3c3p_A Methyltransferase; NP_9 99.2 8.1E-11 2.8E-15 102.1 9.6 76 189-265 56-136 (210)
160 3c3y_A Pfomt, O-methyltransfer 99.2 1E-10 3.5E-15 103.7 10.4 76 189-264 70-156 (237)
161 3ofk_A Nodulation protein S; N 99.2 7.4E-11 2.5E-15 102.5 9.2 77 189-268 51-127 (216)
162 1vbf_A 231AA long hypothetical 99.2 1.6E-10 5.5E-15 101.5 11.4 78 188-268 69-147 (231)
163 1xdz_A Methyltransferase GIDB; 99.2 4.8E-11 1.6E-15 105.9 8.1 74 189-263 70-149 (240)
164 1sqg_A SUN protein, FMU protei 99.2 1E-10 3.5E-15 112.8 10.8 84 187-272 244-332 (429)
165 2gpy_A O-methyltransferase; st 99.2 1E-10 3.5E-15 103.1 9.9 79 188-266 53-137 (233)
166 3sm3_A SAM-dependent methyltra 99.2 1.2E-10 4.1E-15 102.0 10.3 85 184-268 25-114 (235)
167 3gu3_A Methyltransferase; alph 99.2 6.9E-11 2.4E-15 107.5 8.9 79 188-268 21-102 (284)
168 1g6q_1 HnRNP arginine N-methyl 99.2 1.4E-10 4.7E-15 107.9 10.9 78 189-267 38-117 (328)
169 2yqz_A Hypothetical protein TT 99.1 3.6E-11 1.2E-15 107.5 6.5 80 187-268 37-117 (263)
170 1i9g_A Hypothetical protein RV 99.1 1.4E-10 4.7E-15 105.0 10.1 78 187-264 97-180 (280)
171 1y8c_A S-adenosylmethionine-de 99.1 1.4E-10 4.7E-15 102.4 9.8 78 189-268 37-115 (246)
172 3mgg_A Methyltransferase; NYSG 99.1 7E-11 2.4E-15 106.7 8.0 80 188-268 36-118 (276)
173 4azs_A Methyltransferase WBDD; 99.1 1.1E-10 3.9E-15 116.4 10.2 83 184-267 61-146 (569)
174 3r3h_A O-methyltransferase, SA 99.1 2.6E-11 8.9E-16 108.0 5.0 76 189-264 60-145 (242)
175 3hnr_A Probable methyltransfer 99.1 1.8E-10 6E-15 100.3 10.0 75 189-268 45-119 (220)
176 3uzu_A Ribosomal RNA small sub 99.1 8.1E-11 2.8E-15 106.9 8.1 76 188-268 41-127 (279)
177 3ou2_A SAM-dependent methyltra 99.1 7E-11 2.4E-15 102.4 7.3 77 187-268 44-120 (218)
178 3iv6_A Putative Zn-dependent a 99.1 8.4E-11 2.9E-15 105.7 7.8 78 188-267 44-122 (261)
179 1u2z_A Histone-lysine N-methyl 99.1 4.7E-10 1.6E-14 107.6 13.0 78 188-265 241-333 (433)
180 3g5l_A Putative S-adenosylmeth 99.1 9.4E-11 3.2E-15 104.4 7.5 76 189-268 44-121 (253)
181 3g2m_A PCZA361.24; SAM-depende 99.1 1.9E-10 6.6E-15 105.2 9.6 74 189-262 82-157 (299)
182 3cgg_A SAM-dependent methyltra 99.1 3.8E-10 1.3E-14 95.7 10.8 126 186-329 43-174 (195)
183 3adn_A Spermidine synthase; am 99.1 1.4E-10 4.9E-15 106.2 8.6 78 188-265 82-167 (294)
184 3ujc_A Phosphoethanolamine N-m 99.1 3E-10 1E-14 101.5 10.3 78 188-268 54-133 (266)
185 2b25_A Hypothetical protein; s 99.1 1.9E-10 6.4E-15 107.2 9.2 78 187-264 103-196 (336)
186 1ri5_A MRNA capping enzyme; me 99.1 3.5E-10 1.2E-14 102.9 10.6 81 186-266 61-144 (298)
187 3g07_A 7SK snRNA methylphospha 99.1 2.2E-10 7.4E-15 104.8 9.2 76 189-264 46-186 (292)
188 2ex4_A Adrenal gland protein A 99.1 2E-10 6.7E-15 101.7 8.6 78 189-267 79-158 (241)
189 3ftd_A Dimethyladenosine trans 99.1 1.4E-10 4.9E-15 103.6 7.7 76 188-268 30-108 (249)
190 1g8a_A Fibrillarin-like PRE-rR 99.1 3.6E-10 1.2E-14 99.1 10.1 74 188-264 72-152 (227)
191 2vdv_E TRNA (guanine-N(7)-)-me 99.1 3.1E-10 1.1E-14 101.0 9.9 74 188-262 48-135 (246)
192 1iy9_A Spermidine synthase; ro 99.1 4E-10 1.4E-14 102.2 10.5 108 188-306 74-188 (275)
193 1yub_A Ermam, rRNA methyltrans 99.1 7.9E-12 2.7E-16 111.5 -0.8 77 188-268 28-106 (245)
194 3ufb_A Type I restriction-modi 99.1 2.9E-10 1E-14 112.2 10.4 94 174-268 200-315 (530)
195 1inl_A Spermidine synthase; be 99.1 3.2E-10 1.1E-14 104.0 9.8 108 188-305 89-203 (296)
196 2pt6_A Spermidine synthase; tr 99.1 2.5E-10 8.6E-15 105.8 9.0 77 188-264 115-198 (321)
197 1xj5_A Spermidine synthase 1; 99.1 3.5E-10 1.2E-14 105.3 10.0 78 187-264 118-203 (334)
198 3thr_A Glycine N-methyltransfe 99.1 3.2E-10 1.1E-14 103.2 9.5 79 189-267 57-143 (293)
199 2p8j_A S-adenosylmethionine-de 99.1 7.3E-10 2.5E-14 95.4 11.3 81 186-268 20-102 (209)
200 3cbg_A O-methyltransferase; cy 99.1 2.8E-10 9.6E-15 100.5 8.8 76 189-264 72-157 (232)
201 3bkx_A SAM-dependent methyltra 99.1 2.1E-10 7.2E-15 103.3 8.1 83 187-269 41-136 (275)
202 1mjf_A Spermidine synthase; sp 99.1 2.6E-10 8.8E-15 103.8 8.5 78 188-266 74-163 (281)
203 3p2e_A 16S rRNA methylase; met 99.1 1.7E-10 5.6E-15 101.6 6.3 79 188-267 23-109 (225)
204 3dli_A Methyltransferase; PSI- 99.1 1.1E-09 3.8E-14 96.8 11.8 73 187-268 39-114 (240)
205 2hnk_A SAM-dependent O-methylt 99.1 3.7E-10 1.3E-14 100.0 8.6 77 188-264 59-156 (239)
206 2o07_A Spermidine synthase; st 99.0 4.4E-10 1.5E-14 103.4 9.2 79 188-266 94-179 (304)
207 3ckk_A TRNA (guanine-N(7)-)-me 99.0 4.7E-10 1.6E-14 99.3 9.1 75 189-264 46-132 (235)
208 1nt2_A Fibrillarin-like PRE-rR 99.0 7.9E-10 2.7E-14 96.2 10.3 74 188-264 56-135 (210)
209 1xtp_A LMAJ004091AAA; SGPP, st 99.0 8.9E-10 3E-14 97.9 10.8 77 189-268 93-171 (254)
210 2p35_A Trans-aconitate 2-methy 99.0 2E-10 6.9E-15 102.4 6.5 75 188-268 32-108 (259)
211 1qyr_A KSGA, high level kasuga 99.0 1.3E-10 4.3E-15 104.1 4.8 76 188-268 20-103 (252)
212 2b2c_A Spermidine synthase; be 99.0 4.6E-10 1.6E-14 103.7 8.8 107 188-305 107-220 (314)
213 3bxo_A N,N-dimethyltransferase 99.0 9.4E-10 3.2E-14 96.7 10.2 75 181-261 32-106 (239)
214 3s1s_A Restriction endonucleas 99.0 3.5E-10 1.2E-14 114.4 8.1 80 189-268 321-412 (878)
215 3lcv_B Sisomicin-gentamicin re 99.0 5.3E-10 1.8E-14 99.2 8.3 85 178-264 121-207 (281)
216 3e8s_A Putative SAM dependent 99.0 2E-10 6.8E-15 100.0 5.5 71 189-266 52-127 (227)
217 3frh_A 16S rRNA methylase; met 99.0 1.2E-09 4.2E-14 95.9 10.4 72 188-262 104-175 (253)
218 3bwc_A Spermidine synthase; SA 99.0 7.6E-10 2.6E-14 101.8 9.5 107 188-305 94-208 (304)
219 3ege_A Putative methyltransfer 99.0 2.8E-10 9.6E-15 102.1 6.5 74 188-268 33-107 (261)
220 3ccf_A Cyclopropane-fatty-acyl 99.0 6.2E-10 2.1E-14 100.7 8.6 75 188-268 56-130 (279)
221 2gs9_A Hypothetical protein TT 99.0 9.2E-10 3.1E-14 95.1 9.3 74 186-268 33-108 (211)
222 3bkw_A MLL3908 protein, S-aden 99.0 9.9E-10 3.4E-14 96.8 9.6 76 189-268 43-120 (243)
223 3ggd_A SAM-dependent methyltra 99.0 9.4E-10 3.2E-14 97.4 9.5 79 187-269 54-138 (245)
224 4fsd_A Arsenic methyltransfera 99.0 3.6E-10 1.2E-14 107.4 7.1 81 188-268 82-179 (383)
225 1uir_A Polyamine aminopropyltr 99.0 1.3E-09 4.6E-14 100.6 10.3 79 188-266 76-162 (314)
226 3bgv_A MRNA CAP guanine-N7 met 99.0 1.9E-09 6.5E-14 99.3 10.5 82 186-267 31-126 (313)
227 3htx_A HEN1; HEN1, small RNA m 99.0 1.7E-09 5.9E-14 109.6 10.7 91 177-268 707-809 (950)
228 2avn_A Ubiquinone/menaquinone 99.0 3.4E-09 1.2E-13 94.9 11.0 75 183-264 48-123 (260)
229 2qfm_A Spermine synthase; sper 98.9 7.9E-10 2.7E-14 103.1 6.8 77 189-265 188-277 (364)
230 1p91_A Ribosomal RNA large sub 98.9 2.6E-09 8.7E-14 96.0 9.3 82 177-264 72-157 (269)
231 3id6_C Fibrillarin-like rRNA/T 98.9 6.6E-09 2.3E-13 91.6 11.3 76 187-265 74-156 (232)
232 3gjy_A Spermidine synthase; AP 98.9 2.5E-09 8.7E-14 98.4 8.8 74 191-265 91-169 (317)
233 1ej0_A FTSJ; methyltransferase 98.9 1.8E-09 6.3E-14 89.7 7.0 70 187-268 20-101 (180)
234 2vdw_A Vaccinia virus capping 98.9 3.5E-09 1.2E-13 97.3 9.5 75 189-263 48-137 (302)
235 2i7c_A Spermidine synthase; tr 98.9 3.2E-09 1.1E-13 96.6 8.9 107 188-305 77-190 (283)
236 3mq2_A 16S rRNA methyltransfer 98.9 1.8E-09 6E-14 93.9 6.4 77 188-266 26-109 (218)
237 2bm8_A Cephalosporin hydroxyla 98.8 1.2E-09 4.1E-14 96.8 4.0 69 190-264 82-161 (236)
238 2r3s_A Uncharacterized protein 98.8 1.1E-08 3.7E-13 94.9 10.6 79 188-267 164-244 (335)
239 3dou_A Ribosomal RNA large sub 98.8 7.6E-09 2.6E-13 88.6 8.3 68 187-266 23-102 (191)
240 3gwz_A MMCR; methyltransferase 98.8 3.4E-08 1.2E-12 93.1 13.1 79 188-268 201-281 (369)
241 1qzz_A RDMB, aclacinomycin-10- 98.8 1.6E-08 5.6E-13 95.2 10.9 79 188-268 181-261 (374)
242 2cmg_A Spermidine synthase; tr 98.8 3.5E-09 1.2E-13 95.3 5.6 75 188-264 71-148 (262)
243 3dp7_A SAM-dependent methyltra 98.8 2.1E-08 7.1E-13 94.4 11.2 80 188-268 178-261 (363)
244 2a14_A Indolethylamine N-methy 98.8 2.8E-09 9.4E-14 95.8 4.8 139 188-330 54-238 (263)
245 3cc8_A Putative methyltransfer 98.8 3E-09 1E-13 92.6 4.2 73 188-268 31-106 (230)
246 2k4m_A TR8_protein, UPF0146 pr 98.8 5.9E-09 2E-13 84.0 5.4 73 178-266 24-101 (153)
247 2i62_A Nicotinamide N-methyltr 98.8 4E-09 1.4E-13 94.1 4.8 78 189-266 56-168 (265)
248 3i53_A O-methyltransferase; CO 98.8 2.7E-08 9.1E-13 92.3 10.4 77 189-267 169-247 (332)
249 1x19_A CRTF-related protein; m 98.8 1.5E-08 5E-13 95.2 8.2 79 188-268 189-269 (359)
250 1tw3_A COMT, carminomycin 4-O- 98.7 2.6E-08 8.8E-13 93.4 9.7 79 188-268 182-262 (360)
251 2plw_A Ribosomal RNA methyltra 98.7 5E-08 1.7E-12 83.4 10.3 69 187-267 20-118 (201)
252 1af7_A Chemotaxis receptor met 98.7 6.4E-08 2.2E-12 87.5 10.6 72 190-261 106-219 (274)
253 2g72_A Phenylethanolamine N-me 98.7 2.8E-08 9.4E-13 90.3 8.1 79 189-267 71-186 (289)
254 3mcz_A O-methyltransferase; ad 98.7 3.7E-08 1.3E-12 92.0 8.8 78 190-268 180-261 (352)
255 4fzv_A Putative methyltransfer 98.7 4.4E-08 1.5E-12 91.7 9.1 84 185-268 144-236 (359)
256 2oo3_A Protein involved in cat 98.7 4.2E-09 1.4E-13 94.6 2.1 76 190-268 92-172 (283)
257 1vlm_A SAM-dependent methyltra 98.7 3.5E-08 1.2E-12 85.8 7.9 67 190-268 48-115 (219)
258 2ip2_A Probable phenazine-spec 98.7 4.4E-08 1.5E-12 90.9 8.6 75 191-267 169-245 (334)
259 3cvo_A Methyltransferase-like 98.7 1.9E-07 6.6E-12 80.2 11.4 75 189-265 30-132 (202)
260 1wg8_A Predicted S-adenosylmet 98.6 1E-07 3.5E-12 85.5 9.5 76 187-267 20-101 (285)
261 2qe6_A Uncharacterized protein 98.6 2.1E-07 7.3E-12 84.1 11.6 76 190-268 78-170 (274)
262 2wa2_A Non-structural protein 98.6 3.7E-09 1.3E-13 95.8 -0.1 75 187-264 80-157 (276)
263 2aot_A HMT, histamine N-methyl 98.6 2E-08 7E-13 91.4 4.6 79 189-268 52-148 (292)
264 2oxt_A Nucleoside-2'-O-methylt 98.6 7.3E-09 2.5E-13 93.3 1.6 75 187-264 72-149 (265)
265 3hp7_A Hemolysin, putative; st 98.6 2.1E-08 7.2E-13 91.2 3.7 87 189-283 85-177 (291)
266 2zfu_A Nucleomethylin, cerebra 98.6 1.8E-08 6E-13 87.3 2.9 60 188-266 66-126 (215)
267 3opn_A Putative hemolysin; str 98.6 1.6E-08 5.4E-13 89.3 2.6 90 189-283 37-129 (232)
268 2nyu_A Putative ribosomal RNA 98.5 1.7E-07 5.7E-12 79.7 7.0 68 187-266 20-108 (196)
269 4e2x_A TCAB9; kijanose, tetron 98.5 1.5E-08 5.2E-13 97.0 -0.1 77 188-268 106-184 (416)
270 1g55_A DNA cytosine methyltran 98.4 3.2E-07 1.1E-11 85.7 7.8 139 191-337 3-159 (343)
271 2p41_A Type II methyltransfera 98.4 5.1E-08 1.7E-12 89.6 1.3 75 187-266 80-159 (305)
272 3lst_A CALO1 methyltransferase 98.4 9.1E-08 3.1E-12 89.4 2.9 76 188-268 183-260 (348)
273 2zig_A TTHA0409, putative modi 98.4 1.6E-06 5.4E-11 79.2 11.1 60 176-235 221-281 (297)
274 3o4f_A Spermidine synthase; am 98.4 4.4E-06 1.5E-10 75.8 12.9 109 186-305 80-196 (294)
275 2xyq_A Putative 2'-O-methyl tr 98.4 8.4E-07 2.9E-11 80.7 8.0 62 187-264 61-132 (290)
276 1g60_A Adenine-specific methyl 98.3 1.7E-06 6E-11 77.4 9.4 62 175-236 197-259 (260)
277 4gqb_A Protein arginine N-meth 98.3 1.2E-06 4E-11 87.6 8.9 74 190-264 358-437 (637)
278 3sso_A Methyltransferase; macr 98.3 2.5E-07 8.6E-12 87.2 2.8 76 178-263 204-296 (419)
279 3g7u_A Cytosine-specific methy 98.2 3.3E-06 1.1E-10 79.7 8.9 105 191-304 3-117 (376)
280 3ua3_A Protein arginine N-meth 98.2 2.3E-06 7.8E-11 85.6 7.9 74 190-264 410-504 (745)
281 3giw_A Protein of unknown func 98.2 1.6E-06 5.6E-11 77.8 5.5 78 190-268 79-173 (277)
282 1fp2_A Isoflavone O-methyltran 98.2 1.5E-06 5.1E-11 81.2 5.5 72 187-268 186-259 (352)
283 3reo_A (ISO)eugenol O-methyltr 98.1 2.6E-06 8.8E-11 80.2 6.3 70 188-267 202-273 (368)
284 4auk_A Ribosomal RNA large sub 98.1 8E-06 2.7E-10 76.1 8.5 72 185-264 207-279 (375)
285 4a6d_A Hydroxyindole O-methylt 98.1 9E-06 3.1E-10 76.0 8.9 73 188-263 178-252 (353)
286 2c7p_A Modification methylase 98.1 1.6E-05 5.6E-10 73.5 10.3 75 190-272 11-88 (327)
287 3p9c_A Caffeic acid O-methyltr 98.0 8.6E-06 3E-10 76.5 8.0 69 188-266 200-270 (364)
288 1fp1_D Isoliquiritigenin 2'-O- 98.0 4.7E-06 1.6E-10 78.4 5.8 71 188-268 208-280 (372)
289 1boo_A Protein (N-4 cytosine-s 98.0 2.4E-06 8.3E-11 79.0 3.3 78 174-253 236-314 (323)
290 1zg3_A Isoflavanone 4'-O-methy 97.9 9E-06 3.1E-10 76.0 6.1 71 188-268 192-264 (358)
291 2wk1_A NOVP; transferase, O-me 97.9 4.9E-05 1.7E-09 68.6 9.2 75 190-264 107-218 (282)
292 4h0n_A DNMT2; SAH binding, tra 97.9 4.5E-05 1.5E-09 70.7 9.1 76 191-272 4-86 (333)
293 3tka_A Ribosomal RNA small sub 97.8 6.3E-05 2.1E-09 69.0 8.7 77 187-268 55-141 (347)
294 2qrv_A DNA (cytosine-5)-methyl 97.8 9.5E-05 3.3E-09 67.2 9.6 78 189-272 15-100 (295)
295 3ubt_Y Modification methylase 97.8 4E-05 1.4E-09 70.7 7.2 74 192-272 2-78 (331)
296 1i4w_A Mitochondrial replicati 97.7 0.00012 4E-09 68.3 9.9 75 190-268 59-155 (353)
297 1eg2_A Modification methylase 97.7 7.8E-05 2.7E-09 68.7 8.3 61 175-235 227-291 (319)
298 2qy6_A UPF0209 protein YFCK; s 97.7 2.9E-05 1E-09 69.3 4.8 75 189-263 60-181 (257)
299 3qv2_A 5-cytosine DNA methyltr 97.7 7.5E-05 2.6E-09 69.0 7.7 72 190-268 10-89 (327)
300 2ld4_A Anamorsin; methyltransf 97.7 2E-05 6.7E-10 65.7 3.4 63 187-268 10-76 (176)
301 3c6k_A Spermine synthase; sper 97.7 4.7E-05 1.6E-09 71.2 6.1 76 189-264 205-293 (381)
302 3lkz_A Non-structural protein 97.5 0.00012 4.3E-09 65.4 6.5 75 187-264 92-169 (321)
303 3p8z_A Mtase, non-structural p 97.5 0.00011 3.8E-09 63.7 5.9 74 187-263 76-152 (267)
304 3me5_A Cytosine-specific methy 97.2 0.00041 1.4E-08 67.2 6.4 80 190-272 88-186 (482)
305 3evf_A RNA-directed RNA polyme 97.0 0.00011 3.6E-09 65.6 0.3 75 187-264 72-149 (277)
306 3gcz_A Polyprotein; flavivirus 97.0 0.00017 5.8E-09 64.4 1.5 74 187-264 88-165 (282)
307 2px2_A Genome polyprotein [con 96.8 0.00022 7.6E-09 62.7 0.0 72 187-263 71-147 (269)
308 3swr_A DNA (cytosine-5)-methyl 96.6 0.0041 1.4E-07 65.2 8.5 77 190-272 540-635 (1002)
309 4ft4_B DNA (cytosine-5)-methyl 96.6 0.0047 1.6E-07 63.6 8.5 42 190-231 212-260 (784)
310 2py6_A Methyltransferase FKBM; 96.5 0.0071 2.4E-07 57.4 8.3 61 188-248 225-292 (409)
311 4dkj_A Cytosine-specific methy 96.2 0.019 6.6E-07 54.2 9.9 82 191-272 11-142 (403)
312 3av4_A DNA (cytosine-5)-methyl 95.9 0.017 5.9E-07 62.1 8.8 77 190-272 851-946 (1330)
313 3r24_A NSP16, 2'-O-methyl tran 95.5 0.018 6.2E-07 51.6 5.6 69 187-268 107-184 (344)
314 3eld_A Methyltransferase; flav 93.7 0.048 1.7E-06 48.9 4.0 75 187-264 79-156 (300)
315 3b5i_A S-adenosyl-L-methionine 92.9 0.37 1.3E-05 44.9 8.9 80 190-269 53-164 (374)
316 2zig_A TTHA0409, putative modi 92.8 0.047 1.6E-06 49.2 2.6 31 238-268 20-53 (297)
317 2efj_A 3,7-dimethylxanthine me 92.6 0.65 2.2E-05 43.4 10.1 78 190-270 53-164 (384)
318 3llv_A Exopolyphosphatase-rela 91.5 0.45 1.6E-05 37.1 6.7 65 190-264 6-79 (141)
319 1boo_A Protein (N-4 cytosine-s 90.9 0.12 4.1E-06 47.2 3.1 31 238-268 13-46 (323)
320 4fn4_A Short chain dehydrogena 90.6 0.98 3.4E-05 39.6 8.6 72 190-263 7-92 (254)
321 3fwz_A Inner membrane protein 90.6 0.44 1.5E-05 37.4 5.8 65 190-264 7-80 (140)
322 1g60_A Adenine-specific methyl 90.0 0.09 3.1E-06 46.4 1.3 30 239-268 4-36 (260)
323 4g81_D Putative hexonate dehyd 89.2 1.3 4.5E-05 38.8 8.2 74 190-265 9-96 (255)
324 3lyl_A 3-oxoacyl-(acyl-carrier 88.8 2.9 9.9E-05 35.7 10.1 74 190-266 5-93 (247)
325 1eg2_A Modification methylase 88.4 0.19 6.4E-06 45.9 2.2 30 239-268 38-71 (319)
326 3ucx_A Short chain dehydrogena 88.1 2.6 8.8E-05 36.6 9.5 72 190-263 11-96 (264)
327 3vyw_A MNMC2; tRNA wobble urid 87.8 3.2 0.00011 37.4 9.9 125 191-329 98-247 (308)
328 2dph_A Formaldehyde dismutase; 87.8 0.63 2.2E-05 43.5 5.5 43 186-228 182-227 (398)
329 3two_A Mannitol dehydrogenase; 87.3 1.1 3.6E-05 41.0 6.7 67 186-262 173-241 (348)
330 3tjr_A Short chain dehydrogena 87.2 2.2 7.5E-05 38.0 8.6 74 190-266 31-119 (301)
331 1m6e_X S-adenosyl-L-methionnin 86.9 0.27 9.4E-06 45.5 2.4 80 190-269 52-153 (359)
332 3ioy_A Short-chain dehydrogena 86.8 2.6 9E-05 37.9 8.9 76 190-266 8-98 (319)
333 3pvc_A TRNA 5-methylaminomethy 86.7 0.24 8.1E-06 50.0 2.0 75 190-264 59-180 (689)
334 3s2e_A Zinc-containing alcohol 86.6 1.2 4E-05 40.5 6.6 44 186-229 163-208 (340)
335 3h7a_A Short chain dehydrogena 86.5 1.6 5.5E-05 37.8 7.1 74 190-266 7-94 (252)
336 2dpm_A M.dpnii 1, protein (ade 86.2 1.3 4.5E-05 39.5 6.4 99 221-329 156-260 (284)
337 1lss_A TRK system potassium up 85.9 2.9 9.9E-05 31.9 7.7 66 190-264 4-78 (140)
338 1rjd_A PPM1P, carboxy methyl t 85.8 2.1 7.3E-05 39.0 7.8 60 189-249 97-178 (334)
339 3o38_A Short chain dehydrogena 85.5 3.3 0.00011 35.8 8.7 77 190-267 22-113 (266)
340 1f8f_A Benzyl alcohol dehydrog 85.5 1.2 4.1E-05 41.0 6.0 43 187-229 188-233 (371)
341 3t4x_A Oxidoreductase, short c 85.2 4 0.00014 35.5 9.1 76 190-266 10-96 (267)
342 3sju_A Keto reductase; short-c 85.1 3 0.0001 36.6 8.2 74 190-266 24-112 (279)
343 3l4b_C TRKA K+ channel protien 84.8 1.9 6.5E-05 36.3 6.6 60 198-264 6-74 (218)
344 1pl8_A Human sorbitol dehydrog 84.4 1.5 5E-05 40.2 6.0 44 186-229 168-214 (356)
345 1yf3_A DNA adenine methylase; 84.2 1.3 4.4E-05 38.9 5.3 41 221-268 137-177 (259)
346 1kol_A Formaldehyde dehydrogen 84.1 1.5 5.1E-05 40.8 6.0 44 186-229 182-228 (398)
347 1ae1_A Tropinone reductase-I; 83.8 4.1 0.00014 35.5 8.6 73 190-265 21-109 (273)
348 4ibo_A Gluconate dehydrogenase 83.8 2.8 9.7E-05 36.6 7.5 74 190-266 26-114 (271)
349 1yb1_A 17-beta-hydroxysteroid 83.8 5.4 0.00019 34.6 9.3 74 190-266 31-119 (272)
350 4egf_A L-xylulose reductase; s 83.7 5 0.00017 34.8 9.0 74 190-266 20-109 (266)
351 2rhc_B Actinorhodin polyketide 83.4 5.6 0.00019 34.7 9.3 73 190-265 22-109 (277)
352 4g65_A TRK system potassium up 83.4 1.8 6.2E-05 41.4 6.4 63 191-262 4-75 (461)
353 4imr_A 3-oxoacyl-(acyl-carrier 83.3 2.8 9.7E-05 36.8 7.3 73 190-265 33-119 (275)
354 3v8b_A Putative dehydrogenase, 83.1 3.7 0.00013 36.1 8.0 73 190-265 28-115 (283)
355 2ae2_A Protein (tropinone redu 83.0 4.4 0.00015 34.9 8.4 73 190-265 9-97 (260)
356 3sx2_A Putative 3-ketoacyl-(ac 82.7 4.7 0.00016 35.1 8.5 74 190-266 13-113 (278)
357 3ic5_A Putative saccharopine d 82.6 4.1 0.00014 29.9 7.0 66 190-265 5-79 (118)
358 2g1p_A DNA adenine methylase; 82.6 1.2 4.1E-05 39.6 4.5 42 220-267 144-186 (278)
359 3t7c_A Carveol dehydrogenase; 82.5 4.9 0.00017 35.6 8.7 73 190-265 28-127 (299)
360 3nyw_A Putative oxidoreductase 82.5 4.7 0.00016 34.7 8.3 76 190-266 7-98 (250)
361 3tos_A CALS11; methyltransfera 82.5 6.8 0.00023 34.3 9.2 75 190-264 70-191 (257)
362 3pxx_A Carveol dehydrogenase; 82.4 5 0.00017 35.0 8.6 74 190-266 10-110 (287)
363 2dpm_A M.dpnii 1, protein (ade 82.2 2.2 7.4E-05 38.1 6.0 49 177-227 22-71 (284)
364 2g1p_A DNA adenine methylase; 81.8 1.9 6.5E-05 38.3 5.5 47 177-225 15-61 (278)
365 3lf2_A Short chain oxidoreduct 81.7 5.7 0.00019 34.4 8.6 75 190-266 8-98 (265)
366 3uve_A Carveol dehydrogenase ( 81.4 5.4 0.00019 34.9 8.4 74 190-266 11-115 (286)
367 3qiv_A Short-chain dehydrogena 81.3 6.6 0.00023 33.5 8.8 73 190-265 9-96 (253)
368 4da9_A Short-chain dehydrogena 81.3 6.9 0.00024 34.2 9.1 73 190-265 29-117 (280)
369 1geg_A Acetoin reductase; SDR 81.2 7.6 0.00026 33.3 9.2 73 190-265 2-89 (256)
370 3gaf_A 7-alpha-hydroxysteroid 81.2 7.1 0.00024 33.6 9.0 74 190-266 12-100 (256)
371 1e3j_A NADP(H)-dependent ketos 81.0 2.3 8E-05 38.7 6.0 44 186-229 165-210 (352)
372 3cxt_A Dehydrogenase with diff 80.9 6.8 0.00023 34.6 8.9 72 190-264 34-120 (291)
373 3r1i_A Short-chain type dehydr 80.7 3.1 0.00011 36.5 6.5 74 190-266 32-120 (276)
374 1e7w_A Pteridine reductase; di 80.7 13 0.00043 32.7 10.6 59 190-251 9-73 (291)
375 4hp8_A 2-deoxy-D-gluconate 3-d 80.6 7.8 0.00027 33.6 8.9 71 190-264 9-88 (247)
376 3f9i_A 3-oxoacyl-[acyl-carrier 80.5 8.9 0.0003 32.6 9.3 72 189-266 13-95 (249)
377 3rkr_A Short chain oxidoreduct 80.4 7.3 0.00025 33.6 8.8 73 190-265 29-116 (262)
378 1uuf_A YAHK, zinc-type alcohol 80.4 1.6 5.6E-05 40.2 4.7 44 186-229 191-236 (369)
379 4iin_A 3-ketoacyl-acyl carrier 80.4 6.7 0.00023 34.0 8.6 75 190-267 29-119 (271)
380 3oec_A Carveol dehydrogenase ( 80.3 6.4 0.00022 35.2 8.6 74 190-266 46-146 (317)
381 1id1_A Putative potassium chan 80.3 4.9 0.00017 31.6 7.0 67 191-264 4-80 (153)
382 4dcm_A Ribosomal RNA large sub 80.2 2.5 8.4E-05 39.2 5.9 72 190-266 39-111 (375)
383 3rku_A Oxidoreductase YMR226C; 80.1 8.2 0.00028 34.0 9.2 75 190-265 33-125 (287)
384 3goh_A Alcohol dehydrogenase, 79.9 3.2 0.00011 37.1 6.4 64 187-261 140-205 (315)
385 3tsc_A Putative oxidoreductase 79.9 7.2 0.00025 33.9 8.7 74 190-266 11-112 (277)
386 3uog_A Alcohol dehydrogenase; 79.5 2.6 9E-05 38.6 5.8 43 187-229 187-231 (363)
387 1xg5_A ARPG836; short chain de 79.4 8.7 0.0003 33.3 9.1 76 190-266 32-122 (279)
388 3tfo_A Putative 3-oxoacyl-(acy 79.3 8.2 0.00028 33.5 8.8 73 190-265 4-91 (264)
389 1pqw_A Polyketide synthase; ro 78.7 2.3 8E-05 35.0 4.8 42 187-228 36-80 (198)
390 1xq1_A Putative tropinone redu 78.6 7.7 0.00026 33.3 8.4 73 190-265 14-102 (266)
391 3grk_A Enoyl-(acyl-carrier-pro 78.6 9.6 0.00033 33.6 9.1 74 190-266 31-120 (293)
392 3imf_A Short chain dehydrogena 78.5 7.2 0.00025 33.6 8.1 72 190-264 6-92 (257)
393 1fmc_A 7 alpha-hydroxysteroid 78.5 10 0.00035 32.1 9.1 74 190-266 11-99 (255)
394 4dry_A 3-oxoacyl-[acyl-carrier 78.3 5.7 0.0002 34.8 7.5 74 190-265 33-121 (281)
395 3fpc_A NADP-dependent alcohol 78.2 2.4 8.1E-05 38.7 5.1 44 186-229 163-209 (352)
396 3l9w_A Glutathione-regulated p 78.2 2.7 9.2E-05 39.6 5.5 65 190-264 4-77 (413)
397 2qhx_A Pteridine reductase 1; 78.0 16 0.00055 32.7 10.6 59 190-251 46-110 (328)
398 4dmm_A 3-oxoacyl-[acyl-carrier 78.0 8.7 0.0003 33.4 8.6 74 190-266 28-117 (269)
399 3jv7_A ADH-A; dehydrogenase, n 77.7 3.7 0.00013 37.2 6.2 44 186-229 168-214 (345)
400 3ftp_A 3-oxoacyl-[acyl-carrier 77.6 8.6 0.00029 33.5 8.4 74 190-266 28-116 (270)
401 1w6u_A 2,4-dienoyl-COA reducta 77.6 10 0.00035 33.2 9.1 73 190-265 26-114 (302)
402 3rih_A Short chain dehydrogena 77.5 4.2 0.00014 36.1 6.4 74 190-265 41-129 (293)
403 3m6i_A L-arabinitol 4-dehydrog 77.4 3.2 0.00011 38.0 5.7 45 186-230 176-223 (363)
404 3pk0_A Short-chain dehydrogena 77.0 11 0.00037 32.5 8.9 74 190-265 10-98 (262)
405 4ej6_A Putative zinc-binding d 76.9 3.8 0.00013 37.7 6.1 44 186-229 179-225 (370)
406 2eih_A Alcohol dehydrogenase; 76.9 4.6 0.00016 36.5 6.6 43 187-229 164-209 (343)
407 3f1l_A Uncharacterized oxidore 76.7 8.7 0.0003 32.9 8.1 74 190-265 12-102 (252)
408 3ps9_A TRNA 5-methylaminomethy 76.4 2.9 9.8E-05 41.9 5.5 74 191-264 68-188 (676)
409 2jah_A Clavulanic acid dehydro 76.4 13 0.00043 31.7 9.0 73 190-265 7-94 (247)
410 3awd_A GOX2181, putative polyo 76.3 13 0.00043 31.7 9.0 73 190-265 13-100 (260)
411 3o26_A Salutaridine reductase; 76.0 11 0.00038 32.9 8.9 75 190-266 12-102 (311)
412 4fgs_A Probable dehydrogenase 75.9 6.9 0.00024 34.5 7.3 70 190-264 29-112 (273)
413 4e6p_A Probable sorbitol dehyd 75.8 12 0.00042 32.0 8.9 71 190-266 8-93 (259)
414 1rjw_A ADH-HT, alcohol dehydro 75.7 4.8 0.00016 36.4 6.4 44 186-229 161-206 (339)
415 3gms_A Putative NADPH:quinone 75.6 2.4 8.2E-05 38.4 4.3 43 187-229 142-187 (340)
416 2b4q_A Rhamnolipids biosynthes 75.2 7.5 0.00026 33.9 7.3 72 190-265 29-115 (276)
417 4fs3_A Enoyl-[acyl-carrier-pro 75.0 7.4 0.00025 33.6 7.2 77 190-267 6-98 (256)
418 1p0f_A NADP-dependent alcohol 74.8 2.7 9.4E-05 38.6 4.5 43 187-229 189-234 (373)
419 1zem_A Xylitol dehydrogenase; 74.6 13 0.00045 31.9 8.8 73 190-265 7-94 (262)
420 1iy8_A Levodione reductase; ox 74.5 15 0.0005 31.6 9.1 75 190-265 13-102 (267)
421 1cdo_A Alcohol dehydrogenase; 74.5 2.8 9.6E-05 38.5 4.5 43 187-229 190-235 (374)
422 1ja9_A 4HNR, 1,3,6,8-tetrahydr 74.5 14 0.00049 31.5 9.0 74 190-266 21-110 (274)
423 1piw_A Hypothetical zinc-type 74.4 2.6 9E-05 38.5 4.3 70 186-263 176-251 (360)
424 3svt_A Short-chain type dehydr 74.4 14 0.00046 32.2 8.9 75 190-265 11-101 (281)
425 2qq5_A DHRS1, dehydrogenase/re 74.2 13 0.00044 31.9 8.5 71 190-263 5-91 (260)
426 3rd5_A Mypaa.01249.C; ssgcid, 74.0 9.8 0.00033 33.3 7.9 70 190-265 16-96 (291)
427 3ip1_A Alcohol dehydrogenase, 73.8 4.5 0.00015 37.6 5.8 43 187-229 211-256 (404)
428 2fzw_A Alcohol dehydrogenase c 73.7 3 0.0001 38.2 4.5 43 187-229 188-233 (373)
429 3pgx_A Carveol dehydrogenase; 73.7 15 0.0005 31.9 8.9 74 190-266 15-116 (280)
430 3tox_A Short chain dehydrogena 73.2 7.1 0.00024 34.2 6.7 73 190-265 8-95 (280)
431 2jhf_A Alcohol dehydrogenase E 73.1 3.2 0.00011 38.1 4.5 42 187-228 189-233 (374)
432 3op4_A 3-oxoacyl-[acyl-carrier 73.0 11 0.00039 32.1 7.8 71 190-266 9-94 (248)
433 2zat_A Dehydrogenase/reductase 72.9 17 0.00058 31.0 9.0 72 190-264 14-100 (260)
434 2qrv_B DNA (cytosine-5)-methyl 72.9 2.7 9.3E-05 36.1 3.6 59 190-270 33-96 (230)
435 1xu9_A Corticosteroid 11-beta- 72.8 15 0.00051 32.0 8.7 71 190-262 28-113 (286)
436 1yf3_A DNA adenine methylase; 72.6 1.9 6.6E-05 37.8 2.7 48 178-228 13-60 (259)
437 1e3i_A Alcohol dehydrogenase, 72.6 3.3 0.00011 38.0 4.5 43 187-229 193-238 (376)
438 4b7c_A Probable oxidoreductase 72.4 3.8 0.00013 36.9 4.8 42 187-228 147-191 (336)
439 2c0c_A Zinc binding alcohol de 72.3 6.7 0.00023 35.8 6.5 44 186-229 160-206 (362)
440 3ek2_A Enoyl-(acyl-carrier-pro 72.3 7.5 0.00026 33.4 6.6 75 189-266 13-103 (271)
441 3l77_A Short-chain alcohol deh 72.3 18 0.00061 30.3 8.9 74 190-266 2-91 (235)
442 3c85_A Putative glutathione-re 72.3 7.1 0.00024 31.6 6.0 65 190-264 39-114 (183)
443 1v3u_A Leukotriene B4 12- hydr 72.2 4.5 0.00015 36.3 5.3 41 187-227 143-186 (333)
444 1vj0_A Alcohol dehydrogenase, 71.9 5.3 0.00018 36.8 5.7 43 187-229 193-238 (380)
445 3uf0_A Short-chain dehydrogena 71.9 8.3 0.00028 33.6 6.8 73 190-266 31-117 (273)
446 2j3h_A NADP-dependent oxidored 71.8 4.5 0.00015 36.5 5.2 43 187-229 153-198 (345)
447 2c07_A 3-oxoacyl-(acyl-carrier 71.6 15 0.00051 32.0 8.5 74 190-266 44-132 (285)
448 3ai3_A NADPH-sorbose reductase 71.4 18 0.00061 31.0 8.8 73 190-265 7-95 (263)
449 3uko_A Alcohol dehydrogenase c 71.4 2.7 9.3E-05 38.7 3.6 42 187-228 191-235 (378)
450 3v2h_A D-beta-hydroxybutyrate 71.0 16 0.00055 31.8 8.5 75 190-266 25-115 (281)
451 2hcy_A Alcohol dehydrogenase 1 70.9 3.6 0.00012 37.3 4.3 43 187-229 167-212 (347)
452 4f3n_A Uncharacterized ACR, CO 70.8 8.9 0.00031 36.2 7.0 44 190-233 138-188 (432)
453 4dyv_A Short-chain dehydrogena 70.4 12 0.00041 32.6 7.5 71 190-266 28-113 (272)
454 4eez_A Alcohol dehydrogenase 1 70.1 7.8 0.00027 34.9 6.4 44 186-229 160-206 (348)
455 1iz0_A Quinone oxidoreductase; 70.1 2.9 9.9E-05 37.1 3.4 43 187-229 123-168 (302)
456 2uvd_A 3-oxoacyl-(acyl-carrier 70.1 22 0.00075 30.0 9.0 74 190-266 4-93 (246)
457 3afn_B Carbonyl reductase; alp 70.0 11 0.00036 32.1 7.0 73 190-265 7-95 (258)
458 3jyn_A Quinone oxidoreductase; 69.9 5.7 0.00019 35.6 5.3 43 187-229 138-183 (325)
459 3s55_A Putative short-chain de 69.2 23 0.00078 30.7 9.1 74 190-266 10-110 (281)
460 3sc4_A Short chain dehydrogena 69.0 6.7 0.00023 34.4 5.5 74 190-266 9-104 (285)
461 3grp_A 3-oxoacyl-(acyl carrier 68.8 15 0.00053 31.7 7.8 71 190-266 27-112 (266)
462 1vl8_A Gluconate 5-dehydrogena 68.7 22 0.00076 30.6 8.8 74 190-266 21-110 (267)
463 1zkd_A DUF185; NESG, RPR58, st 68.6 11 0.00039 34.9 7.1 50 191-243 82-140 (387)
464 1xkq_A Short-chain reductase f 68.6 21 0.00071 30.9 8.7 75 190-265 6-96 (280)
465 3ius_A Uncharacterized conserv 68.3 14 0.00049 31.8 7.5 64 191-265 6-73 (286)
466 3ppi_A 3-hydroxyacyl-COA dehyd 68.1 18 0.00061 31.3 8.2 67 190-262 30-110 (281)
467 1wma_A Carbonyl reductase [NAD 68.0 22 0.00075 30.2 8.7 72 190-264 4-91 (276)
468 3qwb_A Probable quinone oxidor 68.0 6.3 0.00022 35.4 5.2 43 187-229 146-191 (334)
469 3oid_A Enoyl-[acyl-carrier-pro 67.8 22 0.00074 30.5 8.6 73 190-265 4-92 (258)
470 2nwq_A Probable short-chain de 67.5 19 0.00066 31.2 8.2 71 191-265 22-107 (272)
471 1mxh_A Pteridine reductase 2; 67.2 24 0.00081 30.4 8.8 73 190-265 11-104 (276)
472 3i1j_A Oxidoreductase, short c 67.0 24 0.00084 29.6 8.7 74 190-265 14-104 (247)
473 1y1p_A ARII, aldehyde reductas 66.9 34 0.0012 30.1 10.0 73 190-265 11-93 (342)
474 1gee_A Glucose 1-dehydrogenase 66.7 26 0.00088 29.7 8.8 74 190-266 7-96 (261)
475 4eye_A Probable oxidoreductase 66.5 4.7 0.00016 36.5 4.1 43 187-229 157-202 (342)
476 1jvb_A NAD(H)-dependent alcoho 66.4 9.1 0.00031 34.6 6.0 44 186-229 167-214 (347)
477 4eso_A Putative oxidoreductase 66.3 22 0.00075 30.4 8.3 71 190-266 8-93 (255)
478 1yb5_A Quinone oxidoreductase; 66.3 7.2 0.00025 35.5 5.3 42 187-228 168-212 (351)
479 3gvc_A Oxidoreductase, probabl 66.0 24 0.00082 30.7 8.5 72 190-266 29-114 (277)
480 3k31_A Enoyl-(acyl-carrier-pro 65.9 13 0.00044 32.8 6.8 74 190-266 30-119 (296)
481 2h6e_A ADH-4, D-arabinose 1-de 65.7 8 0.00028 34.9 5.5 43 186-229 168-214 (344)
482 3ged_A Short-chain dehydrogena 65.5 11 0.00039 32.6 6.1 68 191-264 3-84 (247)
483 1edo_A Beta-keto acyl carrier 65.4 24 0.00082 29.5 8.2 72 192-266 3-90 (244)
484 2pnf_A 3-oxoacyl-[acyl-carrier 65.4 29 0.00098 29.0 8.8 74 190-266 7-96 (248)
485 1yxm_A Pecra, peroxisomal tran 65.4 29 0.001 30.2 9.1 74 190-264 18-109 (303)
486 2d8a_A PH0655, probable L-thre 65.3 6.5 0.00022 35.6 4.8 41 189-229 167-210 (348)
487 1wly_A CAAR, 2-haloacrylate re 65.1 12 0.00042 33.4 6.6 43 187-229 143-188 (333)
488 3e03_A Short chain dehydrogena 65.1 10 0.00034 33.0 5.8 73 190-265 6-100 (274)
489 2pv0_B DNA (cytosine-5)-methyl 65.1 7.9 0.00027 35.9 5.2 59 190-270 189-252 (386)
490 1qor_A Quinone oxidoreductase; 65.1 7.8 0.00027 34.6 5.2 43 187-229 138-183 (327)
491 2gdz_A NAD+-dependent 15-hydro 65.0 23 0.00078 30.3 8.2 75 190-265 7-96 (267)
492 4dup_A Quinone oxidoreductase; 64.8 8.1 0.00028 35.1 5.3 43 187-229 165-210 (353)
493 3d3w_A L-xylulose reductase; u 64.8 27 0.00093 29.2 8.5 70 190-266 7-87 (244)
494 3e8x_A Putative NAD-dependent 64.7 14 0.00049 30.9 6.6 68 190-266 21-95 (236)
495 3asu_A Short-chain dehydrogena 64.5 34 0.0012 29.0 9.1 67 193-265 3-84 (248)
496 1xhl_A Short-chain dehydrogena 64.3 30 0.001 30.3 8.9 75 190-265 26-116 (297)
497 3nx4_A Putative oxidoreductase 64.1 4.7 0.00016 36.1 3.5 38 192-229 149-189 (324)
498 1cyd_A Carbonyl reductase; sho 63.8 29 0.00099 29.0 8.5 70 190-266 7-87 (244)
499 2z1n_A Dehydrogenase; reductas 63.7 32 0.0011 29.3 8.8 75 190-266 7-96 (260)
500 1oaa_A Sepiapterin reductase; 63.6 22 0.00076 30.3 7.8 75 190-265 6-102 (259)
No 1
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.91 E-value=2.1e-23 Score=186.03 Aligned_cols=192 Identities=51% Similarity=0.933 Sum_probs=161.5
Q ss_pred CCCChhhhcCcchhHHhhccchhhhccCcccccCCccccccCHHHHHHHHHHHhhcccccccCCCCCCHHHHHHHHHHhc
Q psy15742 108 ENVPEEIWANPYLNKYYQQRYLYWSRYDEGILMDEESWYSVTPEKVAQHIASRCKASDVVIDGWYSVTPEKVAQHIASRC 187 (342)
Q Consensus 108 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~ 187 (342)
..+|.....++.+.++|.++...+..++.++..+..+|++.+++.++..+...+.. .
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----------------------~ 76 (241)
T 3gdh_A 20 NGLPPEIAAVPELAKYWAQRYRLFSRFDDGIKLDREGWFSVTPEKIAEHIAGRVSQ-----------------------S 76 (241)
T ss_dssp --CCHHHHHCGGGHHHHHTHHHHCTTGGGTCCCCHHHHHHCCCHHHHHHHHHHHHH-----------------------H
T ss_pred CCCChhhhccHHHHHHHHhhhhhHhhccCCceecccceeecCHHHHHHHHHHHhhh-----------------------c
Confidence 35666677778899999999999999888888888889988888776666554421 1
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGG 267 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~~ 267 (342)
.++.+|||+|||+|.+++.+++.+.+|+|+|+|+.+++.|++|++.+++.++++++++|+.++++..+||+|++||||++
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWGG 156 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCSS
T ss_pred cCCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcCC
Confidence 24789999999999999999999999999999999999999999999986689999999999877779999999999998
Q ss_pred Ccccc-ccccccccCcCCCCchhhhHhhhccCCCceeecCCCCCHHHHHHhhCCCcEE
Q psy15742 268 PEYAR-SSFSIDNIFPEQGGGRRLFQVARGISPNVGYYLPRTSDVFEIFHDSGKKGSF 324 (342)
Q Consensus 268 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~i 324 (342)
..... ...++.+++.+ ||..+++......++..+++|++....++..++.+++.+
T Consensus 157 ~~~~~~~~~~~~~~L~p--gG~~i~~~~~~~~~~~~~~lp~~~~~~~~~~~l~~~g~~ 212 (241)
T 3gdh_A 157 PDYATAETFDIRTMMSP--DGFEIFRLSKKITNNIVYFLPRNADIDQVASLAGPGGQV 212 (241)
T ss_dssp GGGGGSSSBCTTTSCSS--CHHHHHHHHHHHCSCEEEEEETTBCHHHHHHTTCTTCCE
T ss_pred cchhhhHHHHHHhhcCC--cceeHHHHHHhhCCceEEECCCCCCHHHHHHHhccCCCE
Confidence 76544 44556667766 788889988999999999999999999999988776543
No 2
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.85 E-value=1.3e-20 Score=181.53 Aligned_cols=149 Identities=17% Similarity=0.254 Sum_probs=114.9
Q ss_pred cCCCCCCH---HHHHHHHHHhcCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEc
Q psy15742 169 DGWYSVTP---EKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQG 245 (342)
Q Consensus 169 ~~~~~~~~---e~~~~~i~~~~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~ 245 (342)
.+||+.++ +.+.+.+.. +.++.+|||+|||+|.+++.+|+.+.+|+|+|+|+.+++.|++|++.+|+. ++|+++
T Consensus 268 ~~F~q~n~~~~e~l~~~~~~-~~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~ 344 (425)
T 2jjq_A 268 NSFFQTNSYQAVNLVRKVSE-LVEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVA 344 (425)
T ss_dssp TSCCCSBHHHHHHHHHHHHH-HCCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEEC
T ss_pred ccccccCHHHHHHHHHHhhc-cCCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEEC
Confidence 45666554 344455555 667889999999999999999999899999999999999999999999984 999999
Q ss_pred cccccCCCCCccEEEEcCCCCCCccccccccccccCcCCCCchhhhHhhhccCCCceeecCCCCC--HHHHHHhhCCCcE
Q psy15742 246 DFFALAPSLQGDVVFLSPPWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYLPRTSD--VFEIFHDSGKKGS 323 (342)
Q Consensus 246 D~~~~~~~~~~D~Ii~nPP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~l~~~~~~~~~ 323 (342)
|+.++++. +||+|++|||+.+... .+++....+.++.+++++.+.. ..++..+ . |+
T Consensus 345 d~~~~~~~-~fD~Vv~dPPr~g~~~------------------~~~~~l~~l~p~givyvsc~p~tlarDl~~l-~--y~ 402 (425)
T 2jjq_A 345 SDREVSVK-GFDTVIVDPPRAGLHP------------------RLVKRLNREKPGVIVYVSCNPETFARDVKML-D--YR 402 (425)
T ss_dssp CTTTCCCT-TCSEEEECCCTTCSCH------------------HHHHHHHHHCCSEEEEEESCHHHHHHHHHHS-S--CC
T ss_pred ChHHcCcc-CCCEEEEcCCccchHH------------------HHHHHHHhcCCCcEEEEECChHHHHhHHhhC-e--EE
Confidence 99998755 8999999999865521 2333334456666666643322 1223333 2 99
Q ss_pred EEEecccCCCCCCCccccC
Q psy15742 324 FISLTGRQMFSPSQDMETV 342 (342)
Q Consensus 324 i~~i~~~~~fp~t~h~e~~ 342 (342)
+..+.+.||||+|.|+|+|
T Consensus 403 l~~~~~~DmFP~T~HvE~v 421 (425)
T 2jjq_A 403 IDEIVALDMFPHTPHVELV 421 (425)
T ss_dssp EEEEEEECCSTTSSCCEEE
T ss_pred EEEEEEECcCCCCceEEEE
Confidence 9999999999999999986
No 3
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.85 E-value=3.5e-21 Score=182.72 Aligned_cols=152 Identities=14% Similarity=0.223 Sum_probs=113.3
Q ss_pred cCCCCCCH---HHHHHHHHHhcC-CCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEE
Q psy15742 169 DGWYSVTP---EKVAQHIASRCK-ASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQ 244 (342)
Q Consensus 169 ~~~~~~~~---e~~~~~i~~~~~-~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~ 244 (342)
.+||++++ +.+...+.+... .+.+|||+|||+|.+++.+|+.+.+|+|+|+|+.+++.|++|++.+|+ ++++|++
T Consensus 189 ~~F~Q~n~~~~~~l~~~~~~~~~~~~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~-~~v~~~~ 267 (369)
T 3bt7_A 189 NSFTQPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHI-DNVQIIR 267 (369)
T ss_dssp TSCCCSBHHHHHHHHHHHHHHTTTCCSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTC-CSEEEEC
T ss_pred CCeecCCHHHHHHHHHHHHHHhhcCCCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEE
Confidence 45677766 455666666654 367899999999999999999888999999999999999999999999 4899999
Q ss_pred ccccccCC---C--------------CCccEEEEcCCCCCCccccccccccccCcCCCCchhhhHhhhccCCCceeecCC
Q psy15742 245 GDFFALAP---S--------------LQGDVVFLSPPWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYLPR 307 (342)
Q Consensus 245 ~D~~~~~~---~--------------~~~D~Ii~nPP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (342)
+|+.++.+ . ..||+|++|||+.+... .+++... .++.+.+++.
T Consensus 268 ~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g~~~------------------~~~~~l~--~~g~ivyvsc 327 (369)
T 3bt7_A 268 MAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSGLDS------------------ETEKMVQ--AYPRILYISC 327 (369)
T ss_dssp CCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTTCCCH------------------HHHHHHT--TSSEEEEEES
T ss_pred CCHHHHHHHHhhccccccccccccccCCCCEEEECcCccccHH------------------HHHHHHh--CCCEEEEEEC
Confidence 99987631 1 27999999999876421 1122221 2334444432
Q ss_pred CCC--HHHHHHhhCCCcEEEEecccCCCCCCCccccC
Q psy15742 308 TSD--VFEIFHDSGKKGSFISLTGRQMFSPSQDMETV 342 (342)
Q Consensus 308 ~~~--~~~l~~~~~~~~~i~~i~~~~~fp~t~h~e~~ 342 (342)
+.. ..++..+. .+|++..+.+.||||+|+|+|+|
T Consensus 328 ~p~t~ard~~~l~-~~y~~~~~~~~D~FP~T~HvE~v 363 (369)
T 3bt7_A 328 NPETLCKNLETLS-QTHKVERLALFDQFPYTHHMQCG 363 (369)
T ss_dssp CHHHHHHHHHHHH-HHEEEEEEEEECCSTTSSCCEEE
T ss_pred CHHHHHHHHHHHh-hCcEEEEEEeeccCCCCCcEEEE
Confidence 221 23344444 47999999999999999999985
No 4
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.84 E-value=2.2e-20 Score=180.80 Aligned_cols=153 Identities=20% Similarity=0.275 Sum_probs=117.4
Q ss_pred CCCCCCH---HHHHHHHHHhc--CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEE
Q psy15742 170 GWYSVTP---EKVAQHIASRC--KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQ 244 (342)
Q Consensus 170 ~~~~~~~---e~~~~~i~~~~--~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~ 244 (342)
.|++.++ +.+++.+.+.+ .++.+|||+|||+|.+++.+|+.+.+|+|+|+|+.+++.|++|++.+|+. +++|++
T Consensus 262 ~f~q~n~~~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~ 340 (433)
T 1uwv_A 262 DFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYH 340 (433)
T ss_dssp SCCCSBHHHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEE
T ss_pred cccccCHHHHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEE
Confidence 4566553 45666666554 46789999999999999999999899999999999999999999999985 899999
Q ss_pred ccccccCC-----CCCccEEEEcCCCCCCccccccccccccCcCCCCchhhhHhhhccCCCceeecCCCCC--HHHHHHh
Q psy15742 245 GDFFALAP-----SLQGDVVFLSPPWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYLPRTSD--VFEIFHD 317 (342)
Q Consensus 245 ~D~~~~~~-----~~~~D~Ii~nPP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~l~~~ 317 (342)
+|+.+..+ ..+||+|++||||.+.. .+++......++.+.+++.+-. ..++..+
T Consensus 341 ~d~~~~l~~~~~~~~~fD~Vv~dPPr~g~~-------------------~~~~~l~~~~p~~ivyvsc~p~tlard~~~l 401 (433)
T 1uwv_A 341 ENLEEDVTKQPWAKNGFDKVLLDPARAGAA-------------------GVMQQIIKLEPIRIVYVSCNPATLARDSEAL 401 (433)
T ss_dssp CCTTSCCSSSGGGTTCCSEEEECCCTTCCH-------------------HHHHHHHHHCCSEEEEEESCHHHHHHHHHHH
T ss_pred CCHHHHhhhhhhhcCCCCEEEECCCCccHH-------------------HHHHHHHhcCCCeEEEEECChHHHHhhHHHH
Confidence 99988532 35799999999998763 1122222344555555533322 2345555
Q ss_pred hCCCcEEEEecccCCCCCCCccccC
Q psy15742 318 SGKKGSFISLTGRQMFSPSQDMETV 342 (342)
Q Consensus 318 ~~~~~~i~~i~~~~~fp~t~h~e~~ 342 (342)
...||++..+.+.||||+|+|+|+|
T Consensus 402 ~~~Gy~~~~~~~~d~Fp~t~HvE~v 426 (433)
T 1uwv_A 402 LKAGYTIARLAMLDMFPHTGHLESM 426 (433)
T ss_dssp HHTTCEEEEEEEECCSTTSSCCEEE
T ss_pred HHCCcEEEEEEEeccCCCCCeEEEE
Confidence 5679999999999999999999985
No 5
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.69 E-value=9.1e-17 Score=152.94 Aligned_cols=153 Identities=14% Similarity=0.191 Sum_probs=118.1
Q ss_pred cccccCCc-cccccCHHHHHHHHHHHhhcccccccCCCCCCHHHHHHHHHHhcCCCCeEEeccCCCcHHHHHHHHhCCEE
Q psy15742 136 EGILMDEE-SWYSVTPEKVAQHIASRCKASDVVIDGWYSVTPEKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKV 214 (342)
Q Consensus 136 ~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~~~~~~vLDlgcGtG~~~~~~a~~~~~v 214 (342)
.+++++.. ++.+.+++.++.+.... +.+|.+|||+|||+|..++.+++.+.+|
T Consensus 65 ~~l~~p~~~~~eQat~e~vA~~~a~~--------------------------l~~g~~VLDLgcG~G~~al~LA~~g~~V 118 (410)
T 3ll7_A 65 SSLYIPSRLSLEQSSGAVTSSYKSRF--------------------------IREGTKVVDLTGGLGIDFIALMSKASQG 118 (410)
T ss_dssp TTCCCCCHHHHHHSCCHHHHHHGGGG--------------------------SCTTCEEEESSCSSSHHHHHHHTTCSEE
T ss_pred CCeecCCCCChhhcCHHHHHHHHHHh--------------------------cCCCCEEEEeCCCchHHHHHHHhcCCEE
Confidence 34555555 66677777666554332 2347899999999999999999999999
Q ss_pred EEEeCCHHHHHHHHHHHHHc--CCCCcEEEEEccccccCC---CCCccEEEEcCCCCCCccccccccccccCcCCCCchh
Q psy15742 215 ISIDIDPAKLRLAQHNASVY--GVSHKIQFIQGDFFALAP---SLQGDVVFLSPPWGGPEYARSSFSIDNIFPEQGGGRR 289 (342)
Q Consensus 215 ~gvD~s~~~l~~a~~n~~~~--gl~~~i~~~~~D~~~~~~---~~~~D~Ii~nPP~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (342)
+|+|+|+.+++.|++|++.+ |+ ++++++++|+.++++ ..+||+|++||||.+. ...+.+++..+.|+ ...
T Consensus 119 ~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~~~~fDvV~lDPPrr~~-~~grv~~led~~P~---l~~ 193 (410)
T 3ll7_A 119 IYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIKTFHPDYIYVDPARRSG-ADKRVYAIADCEPD---LIP 193 (410)
T ss_dssp EEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHHHHCCSEEEECCEEC------CCCCGGGEESC---HHH
T ss_pred EEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhccCCCceEEEECCCCcCC-CCceEEehhhcCCC---HHH
Confidence 99999999999999999998 88 689999999998643 2489999999999874 23478899999986 445
Q ss_pred hhHhhhccCCCceeecCCCCCHHHHHHhhC
Q psy15742 290 LFQVARGISPNVGYYLPRTSDVFEIFHDSG 319 (342)
Q Consensus 290 ~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~ 319 (342)
+.......++..++.+++..+...+...+.
T Consensus 194 ~~~~l~~~~~~~~vK~sP~ld~~~~~~~l~ 223 (410)
T 3ll7_A 194 LATELLPFCSSILAKLSPMIDLWDTLQSLL 223 (410)
T ss_dssp HHHHHGGGSSEEEEEECTTSCHHHHHHHCS
T ss_pred HHHHHHhhCCcEEEEcCCCCChHHHHhhCC
Confidence 555555667788889999999986665544
No 6
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.64 E-value=4.4e-16 Score=158.71 Aligned_cols=146 Identities=14% Similarity=0.186 Sum_probs=100.8
Q ss_pred CCCeEEeccCCCcHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEEEccccccC--CCCCccEEEEcCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVC-QKVISIDIDPAKLRLAQHNASVYGVS-HKIQFIQGDFFALA--PSLQGDVVFLSPP 264 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~-~~v~gvD~s~~~l~~a~~n~~~~gl~-~~i~~~~~D~~~~~--~~~~~D~Ii~nPP 264 (342)
+|.+|||+|||||.+++.++..+ .+|+++|+|+.+++.|++|++.+|++ ++++++++|+.++. ...+||+|++|||
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 37899999999999999999874 56999999999999999999999996 58999999999864 3468999999999
Q ss_pred CCCCcccc-ccccccccCcCCCCchhhhHhhhccCCCceeecCCCC---CHHHHHHhhCCCcEEEEecccCC---CCCCC
Q psy15742 265 WGGPEYAR-SSFSIDNIFPEQGGGRRLFQVARGISPNVGYYLPRTS---DVFEIFHDSGKKGSFISLTGRQM---FSPSQ 337 (342)
Q Consensus 265 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~l~~~~~~~~~i~~i~~~~~---fp~t~ 337 (342)
+...+-.. ..++....+.. .+....+.+.+++.++++.+. ... ...+...++++..++...+ |+.+.
T Consensus 619 ~f~~~~~~~~~~~~~~~~~~-----ll~~a~~~LkpgG~L~~s~~~~~~~~~-~~~l~~~g~~~~~i~~~~lp~df~~~~ 692 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQRDHLA-----LMKDLKRLLRAGGTIMFSNNKRGFRMD-LDGLAKLGLKAQEITQKTLSQDFARNR 692 (703)
T ss_dssp SBC-------CCBHHHHHHH-----HHHHHHHHEEEEEEEEEEECCTTCCCC-HHHHHHTTEEEEECTTTTCCGGGTTCS
T ss_pred cccCCccchhHHHHHHHHHH-----HHHHHHHhcCCCcEEEEEECCcccccC-HHHHHHcCCceeeeeeccCCCCCCCCC
Confidence 75432110 11111111111 344555667777777775444 221 2222234677667766654 66655
Q ss_pred ccc
Q psy15742 338 DME 340 (342)
Q Consensus 338 h~e 340 (342)
+++
T Consensus 693 ~ih 695 (703)
T 3v97_A 693 QIH 695 (703)
T ss_dssp SCC
T ss_pred cce
Confidence 554
No 7
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.63 E-value=2.5e-15 Score=143.13 Aligned_cols=80 Identities=18% Similarity=0.188 Sum_probs=70.7
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCC-cEEEEEccccccCC-----CCCccEEE
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVC-QKVISIDIDPAKLRLAQHNASVYGVSH-KIQFIQGDFFALAP-----SLQGDVVF 260 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~-~~v~gvD~s~~~l~~a~~n~~~~gl~~-~i~~~~~D~~~~~~-----~~~~D~Ii 260 (342)
.++.+|||+|||+|.+++.+|+.+ .+|+|+|+|+.+++.|++|++.+|+++ +++++++|+.++.+ ..+||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 457899999999999999999964 599999999999999999999999965 89999999988642 34899999
Q ss_pred EcCCCCC
Q psy15742 261 LSPPWGG 267 (342)
Q Consensus 261 ~nPP~~~ 267 (342)
+|||+.+
T Consensus 291 ~DPP~~~ 297 (385)
T 2b78_A 291 IDPPSFA 297 (385)
T ss_dssp ECCCCC-
T ss_pred ECCCCCC
Confidence 9999864
No 8
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.62 E-value=4.4e-16 Score=147.93 Aligned_cols=120 Identities=18% Similarity=0.298 Sum_probs=90.6
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhC----------------------------------------CEEEEEeCCHHHHHHH
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVC----------------------------------------QKVISIDIDPAKLRLA 227 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~----------------------------------------~~v~gvD~s~~~l~~a 227 (342)
+++..++|++||+|++++++|..+ .+|+|+|+|+.+++.|
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 457899999999999999999763 3499999999999999
Q ss_pred HHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCCCCccccccccccccCcCCCCchhhhHhhhccCCCceeecCC
Q psy15742 228 QHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYLPR 307 (342)
Q Consensus 228 ~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (342)
++|++.+|+.++++++++|+.++....+||+|++||||+.. .....++..+++. +.+..+......++++..
T Consensus 273 r~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~r--l~~~~~l~~ly~~------lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 273 RKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGER--LLDDKAVDILYNE------MGETFAPLKTWSQFILTN 344 (384)
T ss_dssp HHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTT--TSCHHHHHHHHHH------HHHHHTTCTTSEEEEEES
T ss_pred HHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhc--cCCHHHHHHHHHH------HHHHHhhCCCcEEEEEEC
Confidence 99999999987899999999998766689999999999865 2222333333332 222333345566666666
Q ss_pred CCCHHHHH
Q psy15742 308 TSDVFEIF 315 (342)
Q Consensus 308 ~~~~~~l~ 315 (342)
+....+..
T Consensus 345 ~~~l~~~~ 352 (384)
T 3ldg_A 345 DTDFEQKF 352 (384)
T ss_dssp CTTHHHHH
T ss_pred CHHHHHHh
Confidence 66655444
No 9
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.62 E-value=6e-15 Score=134.79 Aligned_cols=127 Identities=17% Similarity=0.162 Sum_probs=91.8
Q ss_pred CCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCc---cEEEEcCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQG---DVVFLSPP 264 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~---D~Ii~nPP 264 (342)
++.+|||+|||+|.+++.+++. +.+|+|+|+|+.+++.|++|++.+|+.++++++++|+.+..+ ++| |+|++|||
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~-~~f~~~D~IvsnPP 201 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK-EKFASIEMILSNPP 201 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG-GGTTTCCEEEECCC
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc-cccCCCCEEEEcCC
Confidence 4679999999999999999998 889999999999999999999999997679999999998654 478 99999999
Q ss_pred CCCCccccccccccccCcC------CCCchhhhHhh-hccCCCceeecC-CCCCHHHHHHhh
Q psy15742 265 WGGPEYARSSFSIDNIFPE------QGGGRRLFQVA-RGISPNVGYYLP-RTSDVFEIFHDS 318 (342)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-~~~~~~~~~~l~-~~~~~~~l~~~~ 318 (342)
|..... ....++. +.|. .++...+..+. +.+.+++.+++. .......+..++
T Consensus 202 yi~~~~-~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q~~~v~~~~ 261 (284)
T 1nv8_A 202 YVKSSA-HLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQVEELKKIV 261 (284)
T ss_dssp CBCGGG-SCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTCHHHHTTTS
T ss_pred CCCccc-ccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHH
Confidence 997653 2111222 2221 01223445555 566677666662 233344444444
No 10
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.61 E-value=6.8e-16 Score=132.20 Aligned_cols=79 Identities=18% Similarity=0.307 Sum_probs=71.0
Q ss_pred CCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC---CCCCccEEEEcCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA---PSLQGDVVFLSPP 264 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~---~~~~~D~Ii~nPP 264 (342)
++.+|||+|||+|.+++.++.. +.+|+|+|+|+.+++.|++|++.+++ ++++++++|+.+++ +..+||+|++|||
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred CCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 5789999999999999988877 45899999999999999999999998 68999999998874 3568999999999
Q ss_pred CCCC
Q psy15742 265 WGGP 268 (342)
Q Consensus 265 ~~~~ 268 (342)
|+..
T Consensus 123 ~~~~ 126 (189)
T 3p9n_A 123 YNVD 126 (189)
T ss_dssp TTSC
T ss_pred CCcc
Confidence 9874
No 11
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.61 E-value=4e-15 Score=141.87 Aligned_cols=120 Identities=23% Similarity=0.305 Sum_probs=90.6
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhC----------------------------------------CEEEEEeCCHHHHHHH
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVC----------------------------------------QKVISIDIDPAKLRLA 227 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~----------------------------------------~~v~gvD~s~~~l~~a 227 (342)
+++..|||++||+|++++++|..+ .+|+|+|+|+.+++.|
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 347799999999999999999863 3499999999999999
Q ss_pred HHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCCCCccccccccccccCcCCCCchhhhHhhhccCCCceeecCC
Q psy15742 228 QHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYLPR 307 (342)
Q Consensus 228 ~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (342)
+.|+..+|+.++++++++|+.+.....+||+|++||||+..- ....++..++.. +.+..+......++++..
T Consensus 280 r~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl--~~~~~l~~ly~~------lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 280 KQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERL--EDEEAVRQLYRE------MGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp HHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSH--HHHHHHHHHHHH------HHHHHHTCTTCEEEEEEC
T ss_pred HHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCcccc--CCchhHHHHHHH------HHHHHhcCCCCEEEEEEC
Confidence 999999999778999999999987667899999999998651 111223333332 222333355666777766
Q ss_pred CCCHHHHH
Q psy15742 308 TSDVFEIF 315 (342)
Q Consensus 308 ~~~~~~l~ 315 (342)
+....+..
T Consensus 352 ~~~l~~~~ 359 (393)
T 3k0b_A 352 YELFEEVY 359 (393)
T ss_dssp CTTHHHHH
T ss_pred CHHHHHHh
Confidence 66665444
No 12
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.60 E-value=7.7e-15 Score=132.09 Aligned_cols=146 Identities=14% Similarity=0.115 Sum_probs=95.0
Q ss_pred CCCeEEeccCCCcHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC---CCCccEEEEcCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVCQ-KVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP---SLQGDVVFLSPP 264 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~~-~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~---~~~~D~Ii~nPP 264 (342)
++.+|||+|||+|.+++.+++.+. +|+|+|+++.+++.|++|+..+++.++++++++|+.++.. ..+||+|++|||
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npP 128 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPP 128 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCC
Confidence 578999999999999999998844 9999999999999999999999998789999999998763 568999999999
Q ss_pred CCCCcccc-----ccccccccCcCCCCchhhhHhhhccCCCceeec-CCCCCHHHHHHhh-CCCcEEEEecccCCCC
Q psy15742 265 WGGPEYAR-----SSFSIDNIFPEQGGGRRLFQVARGISPNVGYYL-PRTSDVFEIFHDS-GKKGSFISLTGRQMFS 334 (342)
Q Consensus 265 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~l~~~~-~~~~~i~~i~~~~~fp 334 (342)
|....... ....+........-...+..+.+.+.+++.+++ .+.....++...+ ..++.+..+.+..-.+
T Consensus 129 y~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~ 205 (259)
T 3lpm_A 129 YFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKRIQFVHPRS 205 (259)
T ss_dssp C-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTTEEEEEEEEEESST
T ss_pred CCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCCCceEEEEEeecCC
Confidence 97541111 001111111000001133445555666655544 3334444454443 3467777666554333
No 13
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.59 E-value=6.4e-15 Score=140.16 Aligned_cols=120 Identities=27% Similarity=0.385 Sum_probs=90.7
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhC----------------------------------------CEEEEEeCCHHHHHHH
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVC----------------------------------------QKVISIDIDPAKLRLA 227 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~----------------------------------------~~v~gvD~s~~~l~~a 227 (342)
.++.+|||+|||+|++++++|..+ .+|+|+|+|+.+++.|
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 347899999999999999998863 4699999999999999
Q ss_pred HHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCCCCccccccccccccCcCCCCchhhhHhhhccCCCceeecCC
Q psy15742 228 QHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYLPR 307 (342)
Q Consensus 228 ~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (342)
+.|+..+|+.+++++.++|+.++....+||+|++||||+..- ....++..++.. +-+..+......++++..
T Consensus 274 r~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl--~~~~~l~~ly~~------lg~~lk~~~g~~~~iit~ 345 (385)
T 3ldu_A 274 RENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERL--EDKDSVKQLYKE------LGYAFRKLKNWSYYLITS 345 (385)
T ss_dssp HHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSH--HHHHHHHHHHHH------HHHHHHTSBSCEEEEEES
T ss_pred HHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCcc--CCHHHHHHHHHH------HHHHHhhCCCCEEEEEEC
Confidence 999999999778999999999987667899999999998642 112223333332 222333355666777766
Q ss_pred CCCHHHHH
Q psy15742 308 TSDVFEIF 315 (342)
Q Consensus 308 ~~~~~~l~ 315 (342)
+.......
T Consensus 346 ~~~l~~~~ 353 (385)
T 3ldu_A 346 YEDFEYEF 353 (385)
T ss_dssp CTTHHHHH
T ss_pred CHHHHHhh
Confidence 66655444
No 14
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.58 E-value=5.4e-15 Score=134.30 Aligned_cols=78 Identities=22% Similarity=0.241 Sum_probs=70.3
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCC
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAVC--QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPP 264 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~~--~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP 264 (342)
+.++.+|||+|||+|.+++.+|+.+ .+|+|+|+|+.+++.|++|++.+++. ++.++++|+.+.....+||+|++|||
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~-~~~~~~~d~~~~~~~~~~D~Vi~d~p 195 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN-NVIPILADNRDVELKDVADRVIMGYV 195 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCS-SEEEEESCGGGCCCTTCEEEEEECCC
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEECChHHcCccCCceEEEECCc
Confidence 4568899999999999999999984 49999999999999999999999985 78999999998833458999999999
Q ss_pred C
Q psy15742 265 W 265 (342)
Q Consensus 265 ~ 265 (342)
+
T Consensus 196 ~ 196 (272)
T 3a27_A 196 H 196 (272)
T ss_dssp S
T ss_pred c
Confidence 7
No 15
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.58 E-value=9.9e-15 Score=132.95 Aligned_cols=84 Identities=21% Similarity=0.283 Sum_probs=75.5
Q ss_pred HHhcCCCCeEEeccCCCcHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEc
Q psy15742 184 ASRCKASDVVIDGFCGCGGNTIQFAAVCQ-KVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLS 262 (342)
Q Consensus 184 ~~~~~~~~~vLDlgcGtG~~~~~~a~~~~-~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~n 262 (342)
...++++.+|||+|||+|.+++.+|+.+. +|+|+|+|+.+++.|++|++.+++.++++++++|+.+++...+||+|++|
T Consensus 120 ~~~~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~ 199 (278)
T 2frn_A 120 AKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMG 199 (278)
T ss_dssp HHHCCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEEC
T ss_pred HHhCCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEEC
Confidence 34456788999999999999999999865 69999999999999999999999976799999999998877799999999
Q ss_pred CCCCC
Q psy15742 263 PPWGG 267 (342)
Q Consensus 263 PP~~~ 267 (342)
||+..
T Consensus 200 ~p~~~ 204 (278)
T 2frn_A 200 YVVRT 204 (278)
T ss_dssp CCSSG
T ss_pred CchhH
Confidence 99654
No 16
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.57 E-value=1.9e-15 Score=128.53 Aligned_cols=79 Identities=25% Similarity=0.370 Sum_probs=70.5
Q ss_pred CCCeEEeccCCCcHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----CCCccEEEEc
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVC-QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----SLQGDVVFLS 262 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~-~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----~~~~D~Ii~n 262 (342)
++.+|||+|||+|.+++.+++.+ .+|+|+|+|+.+++.|++|+..+++.++++++++|+.+..+ ..+||+|++|
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~ 123 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLD 123 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEEC
Confidence 47799999999999999988874 79999999999999999999999986689999999988542 5689999999
Q ss_pred CCCCC
Q psy15742 263 PPWGG 267 (342)
Q Consensus 263 PP~~~ 267 (342)
|||+.
T Consensus 124 ~~~~~ 128 (187)
T 2fhp_A 124 PPYAK 128 (187)
T ss_dssp CCGGG
T ss_pred CCCCc
Confidence 99863
No 17
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.57 E-value=2.3e-15 Score=130.50 Aligned_cols=78 Identities=23% Similarity=0.360 Sum_probs=69.2
Q ss_pred CCCeEEeccCCCcHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEEEccccccCC---CCC-ccEEEEc
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVC-QKVISIDIDPAKLRLAQHNASVYGVS-HKIQFIQGDFFALAP---SLQ-GDVVFLS 262 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~-~~v~gvD~s~~~l~~a~~n~~~~gl~-~~i~~~~~D~~~~~~---~~~-~D~Ii~n 262 (342)
++.+|||+|||+|.+++.++..+ .+|+|+|+|+.+++.|++|++.+++. ++++++++|+.++.+ ..+ ||+|++|
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 47799999999999999877764 69999999999999999999999984 589999999988753 457 9999999
Q ss_pred CCCC
Q psy15742 263 PPWG 266 (342)
Q Consensus 263 PP~~ 266 (342)
|||+
T Consensus 133 ~~~~ 136 (201)
T 2ift_A 133 PPFH 136 (201)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 9986
No 18
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.57 E-value=8.9e-15 Score=138.75 Aligned_cols=82 Identities=32% Similarity=0.352 Sum_probs=73.6
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcC
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAVCQ--KVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSP 263 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~~~--~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nP 263 (342)
.+++.+|||+|||+|.+++.+|..+. +|+|+|+|+.+++.|++|++.+|+.++++++++|+.+++ +..+||+|++||
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~np 294 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNL 294 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEEC
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECC
Confidence 45688999999999999999999866 999999999999999999999999778999999999986 346899999999
Q ss_pred CCCCC
Q psy15742 264 PWGGP 268 (342)
Q Consensus 264 P~~~~ 268 (342)
||+..
T Consensus 295 Pyg~r 299 (373)
T 3tm4_A 295 PYGLK 299 (373)
T ss_dssp CCC--
T ss_pred CCCcc
Confidence 99864
No 19
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.57 E-value=1.3e-14 Score=131.64 Aligned_cols=88 Identities=22% Similarity=0.285 Sum_probs=79.3
Q ss_pred HHHHhcCCCCeEEeccCCCcHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEE
Q psy15742 182 HIASRCKASDVVIDGFCGCGGNTIQFAAVC-QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVF 260 (342)
Q Consensus 182 ~i~~~~~~~~~vLDlgcGtG~~~~~~a~~~-~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii 260 (342)
.+...+++|.+|||+|||+|.+++.+|+.+ .+|+++|+|+.+++.+++|++.||+.++++++++|+.++...+.||.|+
T Consensus 118 ri~~~~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi 197 (278)
T 3k6r_A 118 RMAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRIL 197 (278)
T ss_dssp HHHHHCCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEE
T ss_pred HHHHhcCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEE
Confidence 345556789999999999999999999885 6999999999999999999999999889999999999998888999999
Q ss_pred EcCCCCCCc
Q psy15742 261 LSPPWGGPE 269 (342)
Q Consensus 261 ~nPP~~~~~ 269 (342)
+|||+....
T Consensus 198 ~~~p~~~~~ 206 (278)
T 3k6r_A 198 MGYVVRTHE 206 (278)
T ss_dssp ECCCSSGGG
T ss_pred ECCCCcHHH
Confidence 999976543
No 20
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.56 E-value=6e-15 Score=137.67 Aligned_cols=81 Identities=21% Similarity=0.270 Sum_probs=71.9
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCC-cEEEEEccccccCC-----CCCccEEEE
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSH-KIQFIQGDFFALAP-----SLQGDVVFL 261 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~-~i~~~~~D~~~~~~-----~~~~D~Ii~ 261 (342)
.++.+|||+|||+|.+++.+++.+.+|+|+|+|+.+++.|++|++.+++++ +++++++|+.++.+ ..+||+|++
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~ 231 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILT 231 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEE
T ss_pred CCCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEE
Confidence 357799999999999999999987799999999999999999999999865 59999999988753 458999999
Q ss_pred cCCCCCC
Q psy15742 262 SPPWGGP 268 (342)
Q Consensus 262 nPP~~~~ 268 (342)
|||+.+.
T Consensus 232 dPP~~~~ 238 (332)
T 2igt_A 232 DPPKFGR 238 (332)
T ss_dssp CCCSEEE
T ss_pred CCccccC
Confidence 9996543
No 21
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.54 E-value=5.8e-14 Score=127.54 Aligned_cols=88 Identities=23% Similarity=0.359 Sum_probs=75.7
Q ss_pred HHHHHhc-CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCcc
Q psy15742 181 QHIASRC-KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGD 257 (342)
Q Consensus 181 ~~i~~~~-~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D 257 (342)
+.+...+ .++.+|||+|||+|.+++.+++. +.+|+|+|+|+.+++.|++|+..++++ +++++++|+.+..+.++||
T Consensus 100 ~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~fD 178 (276)
T 2b3t_A 100 EQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFA 178 (276)
T ss_dssp HHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTTGGGTTCCEE
T ss_pred HHHHHhcccCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchhhhcccCCcc
Confidence 3333333 35779999999999999999976 689999999999999999999999985 7999999999876567899
Q ss_pred EEEEcCCCCCCc
Q psy15742 258 VVFLSPPWGGPE 269 (342)
Q Consensus 258 ~Ii~nPP~~~~~ 269 (342)
+|++||||....
T Consensus 179 ~Iv~npPy~~~~ 190 (276)
T 2b3t_A 179 MIVSNPPYIDEQ 190 (276)
T ss_dssp EEEECCCCBCTT
T ss_pred EEEECCCCCCcc
Confidence 999999998764
No 22
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.54 E-value=4.2e-14 Score=135.16 Aligned_cols=135 Identities=18% Similarity=0.192 Sum_probs=95.4
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCC-CCcEEEEEccccccCC-----CCCccEEE
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGV-SHKIQFIQGDFFALAP-----SLQGDVVF 260 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl-~~~i~~~~~D~~~~~~-----~~~~D~Ii 260 (342)
.++.+|||+|||+|++++.+|+. +.+|+|+|+|+.+++.|++|++.+|+ +++++++++|+.++.+ ..+||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 45789999999999999999998 46999999999999999999999998 6689999999988753 45899999
Q ss_pred EcCCCCCCccccccccccccCcCCCCchhhhHhhhccCCCceeec---CCCCCHHH-------HHHhhCCCcEEEEec
Q psy15742 261 LSPPWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYL---PRTSDVFE-------IFHDSGKKGSFISLT 328 (342)
Q Consensus 261 ~nPP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~-------l~~~~~~~~~i~~i~ 328 (342)
+|||+...+.. .+...... -...+....+.+.+++.+++ +.+..... .....+..+++....
T Consensus 299 ~dpP~~~~~~~----~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~~~ 370 (396)
T 3c0k_A 299 MDPPKFVENKS----QLMGACRG--YKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQF 370 (396)
T ss_dssp ECCSSTTTCSS----SSSCCCTH--HHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred ECCCCCCCChh----HHHHHHHH--HHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEEEEEEC
Confidence 99998765321 11111111 01134445666777766666 33444332 222334556666544
No 23
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.54 E-value=2.6e-14 Score=133.63 Aligned_cols=83 Identities=29% Similarity=0.447 Sum_probs=74.6
Q ss_pred HHHhcCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEc
Q psy15742 183 IASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLS 262 (342)
Q Consensus 183 i~~~~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~n 262 (342)
+...+.++.+|||+|||+|.+++. |+.+.+|+|+|+|+.+++.|++|++.+|+.++++++++|+.++. .+||+|++|
T Consensus 189 i~~~~~~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--~~fD~Vi~d 265 (336)
T 2yx1_A 189 IMKKVSLNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--VKGNRVIMN 265 (336)
T ss_dssp HHHHCCTTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC--CCEEEEEEC
T ss_pred HHHhcCCCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc--CCCcEEEEC
Confidence 344556788999999999999999 88888999999999999999999999999768999999999987 689999999
Q ss_pred CCCCCC
Q psy15742 263 PPWGGP 268 (342)
Q Consensus 263 PP~~~~ 268 (342)
||+...
T Consensus 266 pP~~~~ 271 (336)
T 2yx1_A 266 LPKFAH 271 (336)
T ss_dssp CTTTGG
T ss_pred CcHhHH
Confidence 997644
No 24
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.53 E-value=2.6e-14 Score=123.88 Aligned_cols=78 Identities=15% Similarity=0.294 Sum_probs=69.1
Q ss_pred CCCeEEeccCCCcHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC--CCCCccEEEEcCCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVC-QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA--PSLQGDVVFLSPPW 265 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~-~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~--~~~~~D~Ii~nPP~ 265 (342)
++.+|||+|||+|.+++.++..+ .+|+|+|+|+.+++.|++|++.+++ ++++++++|+.++. ...+||+|++||||
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 47799999999999999877764 6999999999999999999999998 58999999998854 34589999999998
Q ss_pred CC
Q psy15742 266 GG 267 (342)
Q Consensus 266 ~~ 267 (342)
+.
T Consensus 133 ~~ 134 (202)
T 2fpo_A 133 RR 134 (202)
T ss_dssp ST
T ss_pred CC
Confidence 74
No 25
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.53 E-value=8.5e-15 Score=122.53 Aligned_cols=76 Identities=21% Similarity=0.387 Sum_probs=68.9
Q ss_pred CCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----CCCccEEEEcC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----SLQGDVVFLSP 263 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----~~~~D~Ii~nP 263 (342)
++.+|||+|||+|.++..+++.+..|+|+|+|+.+++.|++|+..+++ +++++++|+.+..+ ..+||+|++||
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 578999999999999999999888899999999999999999999987 79999999987532 23799999999
Q ss_pred CCC
Q psy15742 264 PWG 266 (342)
Q Consensus 264 P~~ 266 (342)
||+
T Consensus 119 ~~~ 121 (171)
T 1ws6_A 119 PYA 121 (171)
T ss_dssp CTT
T ss_pred CCc
Confidence 997
No 26
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.52 E-value=1.7e-13 Score=120.69 Aligned_cols=82 Identities=15% Similarity=0.176 Sum_probs=70.9
Q ss_pred hcCCCCeEEeccCC-CcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEcccccc--CCCCCccEEEE
Q psy15742 186 RCKASDVVIDGFCG-CGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL--APSLQGDVVFL 261 (342)
Q Consensus 186 ~~~~~~~vLDlgcG-tG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~--~~~~~~D~Ii~ 261 (342)
.++++.+|||+||| +|.+++.+++. +.+|+|+|+|+.+++.|++|+..+++ +++++++|+... .++.+||+|++
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~~fD~I~~ 129 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKGVVEGTFDVIFS 129 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTTTCCSCEEEEEE
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhhcccCceeEEEE
Confidence 34678899999999 99999999998 89999999999999999999999998 799999996433 24478999999
Q ss_pred cCCCCCCc
Q psy15742 262 SPPWGGPE 269 (342)
Q Consensus 262 nPP~~~~~ 269 (342)
||||....
T Consensus 130 npp~~~~~ 137 (230)
T 3evz_A 130 APPYYDKP 137 (230)
T ss_dssp CCCCC---
T ss_pred CCCCcCCc
Confidence 99998754
No 27
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.51 E-value=8.6e-14 Score=120.52 Aligned_cols=76 Identities=22% Similarity=0.360 Sum_probs=69.3
Q ss_pred CCCeEEeccCCCcHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVC-QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGG 267 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~-~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~~ 267 (342)
++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++|+..+++ +++++++|+.+++ .+||+|++||||+.
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~--~~~D~v~~~~p~~~ 124 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEFN--SRVDIVIMNPPFGS 124 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGCC--CCCSEEEECCCCSS
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHcC--CCCCEEEEcCCCcc
Confidence 57899999999999999999884 5799999999999999999999887 7999999999874 48999999999986
Q ss_pred C
Q psy15742 268 P 268 (342)
Q Consensus 268 ~ 268 (342)
.
T Consensus 125 ~ 125 (207)
T 1wy7_A 125 Q 125 (207)
T ss_dssp S
T ss_pred c
Confidence 5
No 28
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.51 E-value=5.7e-14 Score=132.22 Aligned_cols=91 Identities=27% Similarity=0.346 Sum_probs=76.3
Q ss_pred HHHHHHHHHh--cCCCCeEEeccCCCcHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC
Q psy15742 177 EKVAQHIASR--CKASDVVIDGFCGCGGNTIQFAAVC---QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA 251 (342)
Q Consensus 177 e~~~~~i~~~--~~~~~~vLDlgcGtG~~~~~~a~~~---~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~ 251 (342)
+.+...+... .+++.+|||+|||+|++++.+|..+ .+++|+|+|+.+++.|++|++.+|++ +++++++|+.+++
T Consensus 189 ~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~ 267 (354)
T 3tma_A 189 PVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLP 267 (354)
T ss_dssp HHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGG
T ss_pred HHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCc
Confidence 3344444433 3467899999999999999999964 89999999999999999999999996 8999999999976
Q ss_pred -CCCCccEEEEcCCCCCC
Q psy15742 252 -PSLQGDVVFLSPPWGGP 268 (342)
Q Consensus 252 -~~~~~D~Ii~nPP~~~~ 268 (342)
+...||+|++||||+..
T Consensus 268 ~~~~~~D~Ii~npPyg~r 285 (354)
T 3tma_A 268 RFFPEVDRILANPPHGLR 285 (354)
T ss_dssp GTCCCCSEEEECCCSCC-
T ss_pred cccCCCCEEEECCCCcCc
Confidence 34568999999999864
No 29
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.50 E-value=5.2e-14 Score=129.50 Aligned_cols=79 Identities=27% Similarity=0.394 Sum_probs=67.5
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGG 267 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~~ 267 (342)
.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++|+..+++ ++++++++|+.+.+. .+||+|++||||..
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~~~-~~~D~Vv~n~py~~ 118 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKTVF-PKFDVCTANIPYKI 118 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSSCC-CCCSEEEEECCGGG
T ss_pred CCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhCCc-ccCCEEEEcCCccc
Confidence 4578999999999999999999888999999999999999999988887 589999999988754 37999999999976
Q ss_pred C
Q psy15742 268 P 268 (342)
Q Consensus 268 ~ 268 (342)
.
T Consensus 119 ~ 119 (299)
T 2h1r_A 119 S 119 (299)
T ss_dssp H
T ss_pred c
Confidence 4
No 30
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.50 E-value=1.4e-13 Score=123.23 Aligned_cols=81 Identities=15% Similarity=0.094 Sum_probs=68.9
Q ss_pred CCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccc----cCC---CCCccEE
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFA----LAP---SLQGDVV 259 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~----~~~---~~~~D~I 259 (342)
++.+|||+|||+|.+++.++.. +.+|+|+|+|+.+++.|++|++.+++.++++++++|+.+ ..+ +.+||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 4679999999999999999876 789999999999999999999999997679999999765 222 2579999
Q ss_pred EEcCCCCCCc
Q psy15742 260 FLSPPWGGPE 269 (342)
Q Consensus 260 i~nPP~~~~~ 269 (342)
++||||....
T Consensus 145 ~~npp~~~~~ 154 (254)
T 2h00_A 145 MCNPPFFANQ 154 (254)
T ss_dssp EECCCCC---
T ss_pred EECCCCccCc
Confidence 9999998653
No 31
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.50 E-value=1.2e-13 Score=117.49 Aligned_cols=84 Identities=18% Similarity=0.229 Sum_probs=71.5
Q ss_pred HHHhcCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC--CCCCccEEE
Q psy15742 183 IASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA--PSLQGDVVF 260 (342)
Q Consensus 183 i~~~~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~--~~~~~D~Ii 260 (342)
+...++++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++|++.+|+ ++++++++|..++. .+.+||+|+
T Consensus 16 l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~~~~~fD~v~ 94 (185)
T 3mti_A 16 LAEVLDDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHYVREPIRAAI 94 (185)
T ss_dssp HHTTCCTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGTCCSCEEEEE
T ss_pred HHHhCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhhccCCcCEEE
Confidence 334567789999999999999999999899999999999999999999999998 68999998887742 356899999
Q ss_pred EcCCCCC
Q psy15742 261 LSPPWGG 267 (342)
Q Consensus 261 ~nPP~~~ 267 (342)
+|++|..
T Consensus 95 ~~~~~~~ 101 (185)
T 3mti_A 95 FNLGYLP 101 (185)
T ss_dssp EEEC---
T ss_pred EeCCCCC
Confidence 9987654
No 32
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.49 E-value=1.1e-13 Score=124.87 Aligned_cols=81 Identities=19% Similarity=0.246 Sum_probs=70.3
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHH---cCCCCcEEEEEccccccC--------CCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASV---YGVSHKIQFIQGDFFALA--------PSL 254 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~---~gl~~~i~~~~~D~~~~~--------~~~ 254 (342)
.++.+|||+|||+|.+++.+++. +.+|+|+|+++.+++.|++|+.. +++.++++++++|+.++. +..
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 34779999999999999999987 47999999999999999999998 888768999999998872 356
Q ss_pred CccEEEEcCCCCCC
Q psy15742 255 QGDVVFLSPPWGGP 268 (342)
Q Consensus 255 ~~D~Ii~nPP~~~~ 268 (342)
+||+|++||||...
T Consensus 115 ~fD~Vv~nPPy~~~ 128 (260)
T 2ozv_A 115 HFHHVIMNPPYNDA 128 (260)
T ss_dssp CEEEEEECCCC---
T ss_pred CcCEEEECCCCcCC
Confidence 89999999999865
No 33
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.49 E-value=5.1e-14 Score=118.89 Aligned_cols=78 Identities=19% Similarity=0.315 Sum_probs=69.8
Q ss_pred CCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC--CCCCccEEEEcCCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA--PSLQGDVVFLSPPW 265 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~--~~~~~D~Ii~nPP~ 265 (342)
++.+|||+|||+|.+++.+++. ..+|+|+|+|+.+++.|++|++.+++.++++++++|+.+.. ....||+|++||||
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~ 110 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPY 110 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSS
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCC
Confidence 5789999999999999999988 46999999999999999999999998668999999998853 23579999999998
Q ss_pred C
Q psy15742 266 G 266 (342)
Q Consensus 266 ~ 266 (342)
+
T Consensus 111 ~ 111 (177)
T 2esr_A 111 A 111 (177)
T ss_dssp H
T ss_pred C
Confidence 5
No 34
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.48 E-value=1.2e-13 Score=131.42 Aligned_cols=110 Identities=18% Similarity=0.270 Sum_probs=84.1
Q ss_pred CCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----CCCccEEEEcC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----SLQGDVVFLSP 263 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----~~~~D~Ii~nP 263 (342)
++.+|||+|||+|.+++.+|+.+.+|+|+|+|+.+++.|++|++.+|++ +++++++|+.++.+ ..+||+|++||
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~-~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLG-NVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCT-TEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCC-CceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 5789999999999999999998889999999999999999999999995 59999999988753 46899999999
Q ss_pred CCCCCccccccccccccCcCCCCchhhhHhhhccCCCceeec
Q psy15742 264 PWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYL 305 (342)
Q Consensus 264 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (342)
|+.+.+.. .+...... -...+..+.+.+.+++.+++
T Consensus 288 P~~~~~~~----~~~~~~~~--~~~~l~~~~~~LkpgG~l~~ 323 (382)
T 1wxx_A 288 PAFAKGKK----DVERAYRA--YKEVNLRAIKLLKEGGILAT 323 (382)
T ss_dssp CCSCCSTT----SHHHHHHH--HHHHHHHHHHTEEEEEEEEE
T ss_pred CCCCCChh----HHHHHHHH--HHHHHHHHHHhcCCCCEEEE
Confidence 98664321 11111110 01134445566677766665
No 35
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.48 E-value=6.7e-14 Score=133.75 Aligned_cols=82 Identities=33% Similarity=0.466 Sum_probs=73.0
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----CCCccEEEE
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----SLQGDVVFL 261 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----~~~~D~Ii~ 261 (342)
+++.+|||+|||+|.+++.+|+. +.+|+|+|+|+.+++.|++|++.+|+.++++++++|+.+..+ ..+||+|++
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 36889999999999999999998 469999999999999999999999996589999999988642 468999999
Q ss_pred cCCCCCCc
Q psy15742 262 SPPWGGPE 269 (342)
Q Consensus 262 nPP~~~~~ 269 (342)
|||+...+
T Consensus 296 dpP~~~~~ 303 (396)
T 2as0_A 296 DPPAFVQH 303 (396)
T ss_dssp CCCCSCSS
T ss_pred CCCCCCCC
Confidence 99987653
No 36
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.48 E-value=1.2e-13 Score=121.38 Aligned_cols=142 Identities=13% Similarity=0.165 Sum_probs=100.5
Q ss_pred CCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEcccccc----CCCCCccEEEEc
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL----APSLQGDVVFLS 262 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~----~~~~~~D~Ii~n 262 (342)
++.+|||+|||+|.+++.+|+. ...|+|+|+|+.+++.|++|+..+|+. +++++++|+.+. .++++||.|+++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~-nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLS-NLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCS-SEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 3679999999999999999987 568999999999999999999999984 799999999875 456799999998
Q ss_pred --CCCCCCccccccccccccCcCCCCchhhhHhhhccCCCceeecCCCCC--HHHHHHhhCCCcEEEEecccCCCCCCCc
Q psy15742 263 --PPWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYLPRTSD--VFEIFHDSGKKGSFISLTGRQMFSPSQD 338 (342)
Q Consensus 263 --PP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~l~~~~~~~~~i~~i~~~~~fp~t~h 338 (342)
+||....... .++.. ...+..+.+.+.+++.+++..+.. ...+...+........+...+.|+++++
T Consensus 113 ~~~p~~~~~~~~-----rr~~~----~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (218)
T 3dxy_A 113 FPDPWHKARHNK-----RRIVQ----VPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYKNLSESNDYVPRPA 183 (218)
T ss_dssp SCCCCCSGGGGG-----GSSCS----HHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEEECCTTSSCBCCCT
T ss_pred CCCCccchhhhh-----hhhhh----HHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHhCCCcccccCcCccCCCCC
Confidence 6665432111 11111 114555667788888877744433 2334443333333445555667777776
Q ss_pred cc
Q psy15742 339 ME 340 (342)
Q Consensus 339 ~e 340 (342)
.+
T Consensus 184 ~~ 185 (218)
T 3dxy_A 184 SR 185 (218)
T ss_dssp TS
T ss_pred CC
Confidence 54
No 37
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.48 E-value=1.7e-13 Score=130.59 Aligned_cols=80 Identities=19% Similarity=0.238 Sum_probs=69.0
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC--CCCccEEEEcCC
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP--SLQGDVVFLSPP 264 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~--~~~~D~Ii~nPP 264 (342)
.++|.+|||+|||||.+++.+|+.|..|+|+|+|+.+++.|++|++.+|+. .++.++|+.++++ .+.||+|++|||
T Consensus 212 ~~~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~--~~~~~~D~~~~l~~~~~~fD~Ii~dpP 289 (393)
T 4dmg_A 212 VRPGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLR--VDIRHGEALPTLRGLEGPFHHVLLDPP 289 (393)
T ss_dssp CCTTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCC--CEEEESCHHHHHHTCCCCEEEEEECCC
T ss_pred hcCCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCC--CcEEEccHHHHHHHhcCCCCEEEECCC
Confidence 345889999999999999999999888999999999999999999999985 3577999988741 234999999999
Q ss_pred CCCC
Q psy15742 265 WGGP 268 (342)
Q Consensus 265 ~~~~ 268 (342)
+...
T Consensus 290 ~f~~ 293 (393)
T 4dmg_A 290 TLVK 293 (393)
T ss_dssp CCCS
T ss_pred cCCC
Confidence 7443
No 38
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.48 E-value=3.5e-13 Score=127.73 Aligned_cols=80 Identities=16% Similarity=0.253 Sum_probs=70.5
Q ss_pred CCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCC--cEEEEEccccccCCCCCccEEEEcCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSH--KIQFIQGDFFALAPSLQGDVVFLSPP 264 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~--~i~~~~~D~~~~~~~~~~D~Ii~nPP 264 (342)
++.+|||+|||+|.+++.+++. +.+|+|+|+|+.+++.|++|+..+|+.+ +++++.+|+.+..+.++||+|++|||
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~fD~Ii~npp 301 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPP 301 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCEEEEEECCC
T ss_pred CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCeeEEEECCC
Confidence 3579999999999999999998 6899999999999999999999999753 58899999998777779999999999
Q ss_pred CCCC
Q psy15742 265 WGGP 268 (342)
Q Consensus 265 ~~~~ 268 (342)
|+..
T Consensus 302 fh~~ 305 (375)
T 4dcm_A 302 FHQQ 305 (375)
T ss_dssp C---
T ss_pred cccC
Confidence 9864
No 39
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.48 E-value=2.6e-13 Score=128.87 Aligned_cols=78 Identities=21% Similarity=0.245 Sum_probs=71.9
Q ss_pred CCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCC-CCccEEEEcCCCCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPS-LQGDVVFLSPPWGG 267 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~-~~~D~Ii~nPP~~~ 267 (342)
++.+|||+|||+|.+++.+++.+.+|+|+|+|+.+++.|++|+..+++ +++++++|+.+.... .+||+|++||||+.
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~--~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANAL--KAQALHSDVDEALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTTTTSCTTCCEEEEEECCCCCT
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCC--CeEEEEcchhhccccCCCeEEEEECCchhh
Confidence 577999999999999999999988999999999999999999999998 489999999988644 78999999999986
Q ss_pred C
Q psy15742 268 P 268 (342)
Q Consensus 268 ~ 268 (342)
.
T Consensus 311 ~ 311 (381)
T 3dmg_A 311 G 311 (381)
T ss_dssp T
T ss_pred c
Confidence 3
No 40
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.48 E-value=5.6e-14 Score=121.88 Aligned_cols=144 Identities=11% Similarity=0.090 Sum_probs=95.2
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcC-----------CCCcEEEEEccccccCCC--C
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYG-----------VSHKIQFIQGDFFALAPS--L 254 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~g-----------l~~~i~~~~~D~~~~~~~--~ 254 (342)
+++.+|||+|||+|..+..+++.|.+|+|+|+|+.|++.|+++..... ...+++++++|+.+++.. +
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~ 100 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIG 100 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCC
Confidence 568899999999999999999999999999999999999998865310 024799999999988643 5
Q ss_pred CccEEEEcCCCCCCcccc---ccccccccCcCCCCch-hhhHhhhccCCCceeecCCCCCHHHHHHhhCCCcEEEEeccc
Q psy15742 255 QGDVVFLSPPWGGPEYAR---SSFSIDNIFPEQGGGR-RLFQVARGISPNVGYYLPRTSDVFEIFHDSGKKGSFISLTGR 330 (342)
Q Consensus 255 ~~D~Ii~nPP~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~i~~i~~~ 330 (342)
+||+|++.-.++...... ....+.+++++ ||. .+...... .....--|-.....++..++..++++..+...
T Consensus 101 ~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkp--gG~~~l~~~~~~--~~~~~~~~~~~~~~el~~~~~~gf~i~~~~~~ 176 (203)
T 1pjz_A 101 HCAAFYDRAAMIALPADMRERYVQHLEALMPQ--ACSGLLITLEYD--QALLEGPPFSVPQTWLHRVMSGNWEVTKVGGQ 176 (203)
T ss_dssp SEEEEEEESCGGGSCHHHHHHHHHHHHHHSCS--EEEEEEEEESSC--SSSSSSCCCCCCHHHHHHTSCSSEEEEEEEES
T ss_pred CEEEEEECcchhhCCHHHHHHHHHHHHHHcCC--CcEEEEEEEecC--ccccCCCCCCCCHHHHHHHhcCCcEEEEeccc
Confidence 899999876655432111 11233444544 442 11111100 00000001224567788877668999888877
Q ss_pred CCCCC
Q psy15742 331 QMFSP 335 (342)
Q Consensus 331 ~~fp~ 335 (342)
+....
T Consensus 177 ~~~~~ 181 (203)
T 1pjz_A 177 DTLHS 181 (203)
T ss_dssp SCTTT
T ss_pred cchhc
Confidence 76543
No 41
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.46 E-value=3.6e-13 Score=113.39 Aligned_cols=136 Identities=16% Similarity=0.106 Sum_probs=89.6
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCcc
Q psy15742 178 KVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGD 257 (342)
Q Consensus 178 ~~~~~i~~~~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D 257 (342)
.+++.+.....++.+|||+|||+|.++..+++.+ +|+|+|+|+.+++. .++++++++|+.+..+..+||
T Consensus 12 ~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~----------~~~~~~~~~d~~~~~~~~~fD 80 (170)
T 3q87_B 12 TLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES----------HRGGNLVRADLLCSINQESVD 80 (170)
T ss_dssp HHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT----------CSSSCEEECSTTTTBCGGGCS
T ss_pred HHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc----------ccCCeEEECChhhhcccCCCC
Confidence 3444433322456799999999999999999989 99999999999987 247899999998866667999
Q ss_pred EEEEcCCCCCCccccccccccccCcCCCCchhhhHhhhccCCCceeec--CCCCCHHHHHHhh-CCCcEEEEecccC
Q psy15742 258 VVFLSPPWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYL--PRTSDVFEIFHDS-GKKGSFISLTGRQ 331 (342)
Q Consensus 258 ~Ii~nPP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~l~~~~-~~~~~i~~i~~~~ 331 (342)
+|++||||........ +....++...+..+.+.+ +++.+++ +......++...+ ..++++..+....
T Consensus 81 ~i~~n~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~ 150 (170)
T 3q87_B 81 VVVFNPPYVPDTDDPI------IGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRK 150 (170)
T ss_dssp EEEECCCCBTTCCCTT------TBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEE
T ss_pred EEEECCCCccCCcccc------ccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeec
Confidence 9999999987543211 110000122333444444 5555544 3444455555443 3567776655443
No 42
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.45 E-value=1.1e-13 Score=141.10 Aligned_cols=81 Identities=25% Similarity=0.382 Sum_probs=70.8
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhC--------------------------------------------CEEEEEeCCHHH
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVC--------------------------------------------QKVISIDIDPAK 223 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~--------------------------------------------~~v~gvD~s~~~ 223 (342)
+++..|+|++||||++++++|..+ ..++|+|+|+.+
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 357799999999999999998752 479999999999
Q ss_pred HHHHHHHHHHcCCCCcEEEEEccccccCCC---CCccEEEEcCCCCCC
Q psy15742 224 LRLAQHNASVYGVSHKIQFIQGDFFALAPS---LQGDVVFLSPPWGGP 268 (342)
Q Consensus 224 l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~---~~~D~Ii~nPP~~~~ 268 (342)
++.|+.|+..+|+.+.++|.++|+.++.+. +.||+|++||||+..
T Consensus 269 v~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~R 316 (703)
T 3v97_A 269 IQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGER 316 (703)
T ss_dssp HHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC-
T ss_pred HHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCcccc
Confidence 999999999999977799999999987432 279999999999854
No 43
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.45 E-value=2.7e-14 Score=123.77 Aligned_cols=89 Identities=18% Similarity=0.222 Sum_probs=56.7
Q ss_pred HHHHHHHhc---CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCC
Q psy15742 179 VAQHIASRC---KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPS 253 (342)
Q Consensus 179 ~~~~i~~~~---~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~ 253 (342)
+++.+...+ .++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|++|+..++. +++++++|+.+..+.
T Consensus 17 ~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~ 94 (215)
T 4dzr_A 17 LVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADGIEWLIE 94 (215)
T ss_dssp HHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHHHHHHHH
T ss_pred HHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcchHhhhhh
Confidence 334444443 56789999999999999999998 56999999999999999999998887 799999999885544
Q ss_pred -----CCccEEEEcCCCCCCc
Q psy15742 254 -----LQGDVVFLSPPWGGPE 269 (342)
Q Consensus 254 -----~~~D~Ii~nPP~~~~~ 269 (342)
++||+|++||||....
T Consensus 95 ~~~~~~~fD~i~~npp~~~~~ 115 (215)
T 4dzr_A 95 RAERGRPWHAIVSNPPYIPTG 115 (215)
T ss_dssp HHHTTCCBSEEEECCCCCC--
T ss_pred hhhccCcccEEEECCCCCCCc
Confidence 7899999999998654
No 44
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.44 E-value=6.5e-13 Score=119.77 Aligned_cols=93 Identities=22% Similarity=0.264 Sum_probs=76.4
Q ss_pred CCCCCHHHHHHHHHHhcCCCCeEEeccCCCcHHHHHHHHh----CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEcc
Q psy15742 171 WYSVTPEKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAV----CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGD 246 (342)
Q Consensus 171 ~~~~~~e~~~~~i~~~~~~~~~vLDlgcGtG~~~~~~a~~----~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D 246 (342)
+|....+.+...+...+++|.+|||+|||+|..++.+++. +.+|+|+|+|+.|++.|++++...+...+++++++|
T Consensus 52 ~Y~~~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D 131 (261)
T 4gek_A 52 GYSNIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGD 131 (261)
T ss_dssp THHHHHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC
T ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecc
Confidence 3333333444445556889999999999999999999985 569999999999999999999998887799999999
Q ss_pred ccccCCCCCccEEEEcCC
Q psy15742 247 FFALAPSLQGDVVFLSPP 264 (342)
Q Consensus 247 ~~~~~~~~~~D~Ii~nPP 264 (342)
+.+++. ..||+|+++--
T Consensus 132 ~~~~~~-~~~d~v~~~~~ 148 (261)
T 4gek_A 132 IRDIAI-ENASMVVLNFT 148 (261)
T ss_dssp TTTCCC-CSEEEEEEESC
T ss_pred cccccc-cccccceeeee
Confidence 998754 46999999644
No 45
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.43 E-value=3.4e-13 Score=126.45 Aligned_cols=77 Identities=21% Similarity=0.194 Sum_probs=69.0
Q ss_pred CCCeEEeccCCCcHHHHHHHHhC-------CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEE
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVC-------QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFL 261 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~-------~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~ 261 (342)
++.+|||+|||+|.+++.+++.. .+++|+|+|+.+++.|+.|+..+|+ ++.++++|++......+||+|++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~~~~~~fD~Ii~ 207 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLANLLVDPVDVVIS 207 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSCCCCCCEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCccccCCccEEEE
Confidence 46799999999999999998762 7899999999999999999999988 68999999988665678999999
Q ss_pred cCCCCC
Q psy15742 262 SPPWGG 267 (342)
Q Consensus 262 nPP~~~ 267 (342)
||||+.
T Consensus 208 NPPfg~ 213 (344)
T 2f8l_A 208 DLPVGY 213 (344)
T ss_dssp ECCCSE
T ss_pred CCCCCC
Confidence 999864
No 46
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.43 E-value=2.5e-13 Score=121.41 Aligned_cols=81 Identities=27% Similarity=0.462 Sum_probs=68.1
Q ss_pred CCCeEEeccCCCcHHHHHHHHh----CCEEEEEeCCHHHHHHHHHHHHHc---CCCCc----------------------
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV----CQKVISIDIDPAKLRLAQHNASVY---GVSHK---------------------- 239 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~----~~~v~gvD~s~~~l~~a~~n~~~~---gl~~~---------------------- 239 (342)
++.+|||+|||+|.+++.+++. +.+|+|+|+|+.+++.|+.|+..+ ++.++
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 4679999999999999999876 578999999999999999999876 55322
Q ss_pred ---EE-------------EEEccccccC------CCCCccEEEEcCCCCCCc
Q psy15742 240 ---IQ-------------FIQGDFFALA------PSLQGDVVFLSPPWGGPE 269 (342)
Q Consensus 240 ---i~-------------~~~~D~~~~~------~~~~~D~Ii~nPP~~~~~ 269 (342)
++ ++++|+.+.. ...+||+|++||||....
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~ 182 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERT 182 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSS
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccc
Confidence 66 9999998865 334899999999998653
No 47
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.42 E-value=1.6e-12 Score=110.47 Aligned_cols=79 Identities=20% Similarity=0.368 Sum_probs=72.1
Q ss_pred CCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCC-cEEEEEccccccCCCCCccEEEEcCCCCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSH-KIQFIQGDFFALAPSLQGDVVFLSPPWGG 267 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~-~i~~~~~D~~~~~~~~~~D~Ii~nPP~~~ 267 (342)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++++..+++.+ +++++++|+.+..+..+||+|++||||+.
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~ 131 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRKYNKIITNPPIRA 131 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTSCEEEEEECCCSTT
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccCCceEEEECCCccc
Confidence 57899999999999999999888999999999999999999999998853 49999999988766678999999999875
No 48
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.42 E-value=7.8e-14 Score=125.54 Aligned_cols=81 Identities=22% Similarity=0.332 Sum_probs=70.0
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCH-------HHHHHHHHHHHHcCCCCcEEEEEccccccCC---C--CC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDP-------AKLRLAQHNASVYGVSHKIQFIQGDFFALAP---S--LQ 255 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~-------~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~---~--~~ 255 (342)
.++.+|||+|||+|.+++.+|+.+.+|+|+|+|+ .+++.|++|++.+++.++++++++|+.++.+ + .+
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~ 161 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGK 161 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCC
T ss_pred CCcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCC
Confidence 3467999999999999999999988999999999 9999999999988876569999999988642 2 58
Q ss_pred ccEEEEcCCCCCC
Q psy15742 256 GDVVFLSPPWGGP 268 (342)
Q Consensus 256 ~D~Ii~nPP~~~~ 268 (342)
||+|++||||...
T Consensus 162 fD~V~~dP~~~~~ 174 (258)
T 2r6z_A 162 PDIVYLDPMYPER 174 (258)
T ss_dssp CSEEEECCCC---
T ss_pred ccEEEECCCCCCc
Confidence 9999999999764
No 49
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.42 E-value=8.8e-13 Score=113.17 Aligned_cols=81 Identities=17% Similarity=0.302 Sum_probs=72.1
Q ss_pred HhcCCCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC--CCCCccEE
Q psy15742 185 SRCKASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA--PSLQGDVV 259 (342)
Q Consensus 185 ~~~~~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~--~~~~~D~I 259 (342)
..++++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|++|++.+|+.++++++++|+.++. ...+||+|
T Consensus 18 ~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v 97 (197)
T 3eey_A 18 MFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAV 97 (197)
T ss_dssp HHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEE
T ss_pred hcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEE
Confidence 34567889999999999999999986 36999999999999999999999998678999999988774 34689999
Q ss_pred EEcCCC
Q psy15742 260 FLSPPW 265 (342)
Q Consensus 260 i~nPP~ 265 (342)
++||||
T Consensus 98 ~~~~~~ 103 (197)
T 3eey_A 98 MFNLGY 103 (197)
T ss_dssp EEEESB
T ss_pred EEcCCc
Confidence 999998
No 50
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.42 E-value=4.4e-13 Score=123.13 Aligned_cols=79 Identities=10% Similarity=0.055 Sum_probs=72.4
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWG 266 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~ 266 (342)
+++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...|++++++++++|+.++ +++||+|+++..++
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~fD~v~~~~~~~ 148 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF--DEPVDRIVSLGAFE 148 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC--CCCCSEEEEESCGG
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc--CCCccEEEEcchHH
Confidence 56889999999999999999998 8999999999999999999999999977899999999987 67899999987765
Q ss_pred CC
Q psy15742 267 GP 268 (342)
Q Consensus 267 ~~ 268 (342)
..
T Consensus 149 ~~ 150 (302)
T 3hem_A 149 HF 150 (302)
T ss_dssp GT
T ss_pred hc
Confidence 54
No 51
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.41 E-value=1.3e-12 Score=112.96 Aligned_cols=79 Identities=14% Similarity=0.174 Sum_probs=70.4
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-CCCccEEEEcC
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAVC--QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-SLQGDVVFLSP 263 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~~--~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-~~~~D~Ii~nP 263 (342)
.+++.+|||+|||+|.+++.+++.+ .+|+|+|+|+.+++.|++|++.+++ ++++++++|+.+..+ ...||+|++++
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~D~i~~~~ 116 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGLDDLPDPDRVFIGG 116 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTCTTSCCCSEEEESC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhhhcCCCCCEEEECC
Confidence 3468899999999999999999985 8999999999999999999999998 589999999977653 36899999998
Q ss_pred CCC
Q psy15742 264 PWG 266 (342)
Q Consensus 264 P~~ 266 (342)
++.
T Consensus 117 ~~~ 119 (204)
T 3e05_A 117 SGG 119 (204)
T ss_dssp CTT
T ss_pred CCc
Confidence 865
No 52
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.40 E-value=7.8e-13 Score=116.14 Aligned_cols=130 Identities=15% Similarity=0.049 Sum_probs=93.5
Q ss_pred HHHHHhcCCCCeEEeccCCCcHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCC-Ccc
Q psy15742 181 QHIASRCKASDVVIDGFCGCGGNTIQFAAVC--QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSL-QGD 257 (342)
Q Consensus 181 ~~i~~~~~~~~~vLDlgcGtG~~~~~~a~~~--~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~-~~D 257 (342)
+.+.+.+++|.+|+|+|||+|.+++.+|+.+ .+|+|+|+|+.+++.|++|++.+|+.++++++++|.++..+.. +||
T Consensus 7 ~~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D 86 (225)
T 3kr9_A 7 ELVASFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVS 86 (225)
T ss_dssp HHHHTTSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCC
T ss_pred HHHHHhCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCC
Confidence 4556667888999999999999999999974 5899999999999999999999999878999999998766544 699
Q ss_pred EEEEcCCCCCCccccccccccccCcCCCCchhhhHhhhccCCCceeecCCCCCHHHHHHhh-CCCcEEEEe
Q psy15742 258 VVFLSPPWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYLPRTSDVFEIFHDS-GKKGSFISL 327 (342)
Q Consensus 258 ~Ii~nPP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~-~~~~~i~~i 327 (342)
+|++. +.. ..-+.++ +-.....+.+...+++.++.....+...+ ..||.+...
T Consensus 87 ~Ivia----G~G----g~~i~~I---------l~~~~~~L~~~~~lVlq~~~~~~~vr~~L~~~Gf~i~~e 140 (225)
T 3kr9_A 87 VITIA----GMG----GRLIARI---------LEEGLGKLANVERLILQPNNREDDLRIWLQDHGFQIVAE 140 (225)
T ss_dssp EEEEE----EEC----HHHHHHH---------HHHTGGGCTTCCEEEEEESSCHHHHHHHHHHTTEEEEEE
T ss_pred EEEEc----CCC----hHHHHHH---------HHHHHHHhCCCCEEEEECCCCHHHHHHHHHHCCCEEEEE
Confidence 98862 110 0001111 22233445566666666666666665433 455666544
No 53
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.40 E-value=1.2e-12 Score=117.34 Aligned_cols=143 Identities=15% Similarity=0.058 Sum_probs=95.3
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHH----------cC------CCCcEEEEEccccccC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASV----------YG------VSHKIQFIQGDFFALA 251 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~----------~g------l~~~i~~~~~D~~~~~ 251 (342)
.++.+|||+|||+|..+..+|+.|.+|+|||+|+.|++.|+++... .+ ...+++++++|+.+++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC
Confidence 3578999999999999999999999999999999999999876532 00 1247999999999987
Q ss_pred CC--CCccEEEEcCCCCCCcccc---ccccccccCcCCCCchhh-hHhhhccCCCceeecCCCCCHHHHHHhhCCCcEEE
Q psy15742 252 PS--LQGDVVFLSPPWGGPEYAR---SSFSIDNIFPEQGGGRRL-FQVARGISPNVGYYLPRTSDVFEIFHDSGKKGSFI 325 (342)
Q Consensus 252 ~~--~~~D~Ii~nPP~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~i~ 325 (342)
.. ++||+|++.-.+....... ....+.+++++ ||..+ ......... .---|-.....++..++..++++.
T Consensus 147 ~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~Lkp--GG~l~l~~~~~~~~~--~~g~~~~~~~~el~~~l~~~f~v~ 222 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRK--EFQYLVAVLSYDPTK--HAGPPFYVPSAELKRLFGTKCSMQ 222 (252)
T ss_dssp GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEE--EEEEEEEEEECCTTS--CCCSSCCCCHHHHHHHHTTTEEEE
T ss_pred cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCC--CeEEEEEEEecCCcc--CCCCCCCCCHHHHHHHhhCCeEEE
Confidence 43 6899999877666543211 11223344444 34332 211110000 000112356778888887789998
Q ss_pred EecccCCCC
Q psy15742 326 SLTGRQMFS 334 (342)
Q Consensus 326 ~i~~~~~fp 334 (342)
.+...+.|.
T Consensus 223 ~~~~~~~~~ 231 (252)
T 2gb4_A 223 CLEEVDALE 231 (252)
T ss_dssp EEEEEECCC
T ss_pred EEeccccch
Confidence 887766654
No 54
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.40 E-value=7.9e-13 Score=117.27 Aligned_cols=81 Identities=14% Similarity=0.085 Sum_probs=71.9
Q ss_pred HHHHHhcCCCCeEEeccCCCcHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCC-Ccc
Q psy15742 181 QHIASRCKASDVVIDGFCGCGGNTIQFAAVC--QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSL-QGD 257 (342)
Q Consensus 181 ~~i~~~~~~~~~vLDlgcGtG~~~~~~a~~~--~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~-~~D 257 (342)
+.+.+.++++.+|+|+|||+|.+++.+++.+ .+|+|+|+|+.+++.|++|++.+|+.++++++++|.++..... +||
T Consensus 13 ~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D 92 (244)
T 3gnl_A 13 EKVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAID 92 (244)
T ss_dssp HHHHTTCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCC
T ss_pred HHHHHhCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCcccccc
Confidence 4455667788999999999999999999974 4799999999999999999999999878999999999887654 599
Q ss_pred EEEE
Q psy15742 258 VVFL 261 (342)
Q Consensus 258 ~Ii~ 261 (342)
+|++
T Consensus 93 ~Ivi 96 (244)
T 3gnl_A 93 TIVI 96 (244)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9887
No 55
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.40 E-value=9.3e-13 Score=115.87 Aligned_cols=130 Identities=12% Similarity=0.029 Sum_probs=93.4
Q ss_pred HHHHHhcCCCCeEEeccCCCcHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCC-Ccc
Q psy15742 181 QHIASRCKASDVVIDGFCGCGGNTIQFAAVC--QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSL-QGD 257 (342)
Q Consensus 181 ~~i~~~~~~~~~vLDlgcGtG~~~~~~a~~~--~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~-~~D 257 (342)
+.+.+.+++|.+|+|+|||+|.+++.+++.+ .+|+|+|+|+.+++.|++|++.+|+.++++++++|.++..... +||
T Consensus 13 ~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D 92 (230)
T 3lec_A 13 QKVANYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNID 92 (230)
T ss_dssp HHHHTTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCC
T ss_pred HHHHHhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccC
Confidence 3455667788999999999999999999974 5799999999999999999999999888999999999887554 699
Q ss_pred EEEEcCCCCCCccccccccccccCcCCCCchhhhHhhhccCCCceeecCCCCCHHHHHHhh-CCCcEEEEe
Q psy15742 258 VVFLSPPWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYLPRTSDVFEIFHDS-GKKGSFISL 327 (342)
Q Consensus 258 ~Ii~nPP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~-~~~~~i~~i 327 (342)
+|++- +.. ..-+.++++ +....+.+...+.+.++.....+...+ ..||.+...
T Consensus 93 ~Ivia----GmG----g~lI~~IL~---------~~~~~l~~~~~lIlqp~~~~~~lr~~L~~~Gf~i~~E 146 (230)
T 3lec_A 93 TITIC----GMG----GRLIADILN---------NDIDKLQHVKTLVLQPNNREDDLRKWLAANDFEIVAE 146 (230)
T ss_dssp EEEEE----EEC----HHHHHHHHH---------HTGGGGTTCCEEEEEESSCHHHHHHHHHHTTEEEEEE
T ss_pred EEEEe----CCc----hHHHHHHHH---------HHHHHhCcCCEEEEECCCChHHHHHHHHHCCCEEEEE
Confidence 98861 110 011111221 122344556667776677777666533 345555543
No 56
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.39 E-value=2.5e-12 Score=111.46 Aligned_cols=134 Identities=13% Similarity=0.060 Sum_probs=96.8
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPPWG 266 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP~~ 266 (342)
+++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++|+..++++ +++++.+|+.+.. +..+||+|+++.+..
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~D~i~~~~~~~ 154 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQGWQARAPFDAIIVTAAPP 154 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGGCCEEEEEESSBCS
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccCCccCCCccEEEEccchh
Confidence 45889999999999999999999999999999999999999999999985 7999999998865 346899999987654
Q ss_pred CCccccccccccccCcCCCCchhhhHhhhccCCCceeecCCCCCHHHHHHhhCCCcEEEEecccCCCCCCCcccc
Q psy15742 267 GPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYLPRTSDVFEIFHDSGKKGSFISLTGRQMFSPSQDMET 341 (342)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~i~~i~~~~~fp~t~h~e~ 341 (342)
... ..+.+++++ ||..++.+.. ....... + .....++....+.+..++|-+..+++
T Consensus 155 ~~~-----~~~~~~L~p--gG~lv~~~~~--~~~~~~~---------~-~~~~~~~~~~~~~~~~f~pl~~~~~~ 210 (210)
T 3lbf_A 155 EIP-----TALMTQLDE--GGILVLPVGE--EHQYLKR---------V-RRRGGEFIIDTVEAVRFVPLVKGELA 210 (210)
T ss_dssp SCC-----THHHHTEEE--EEEEEEEECS--SSCEEEE---------E-EEETTEEEEEEEEECCCCBCCCSSCC
T ss_pred hhh-----HHHHHhccc--CcEEEEEEcC--CceEEEE---------E-EEcCCeEEEEEeccEEEEEccCccCC
Confidence 431 123333433 3333332221 1111111 1 11245678888899999999887653
No 57
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.38 E-value=3.6e-12 Score=110.58 Aligned_cols=77 Identities=19% Similarity=0.312 Sum_probs=69.4
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPP 264 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP 264 (342)
.++.+|||+|||+|.+++.+++.+.+|+|+|+|+.+++.|++|++.+|++++++++++|+.+.. ....||+|++++.
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~ 131 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGG 131 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSC
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCc
Confidence 4578999999999999999999999999999999999999999999999668999999999854 3457999999874
No 58
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.38 E-value=1.3e-12 Score=112.54 Aligned_cols=74 Identities=24% Similarity=0.351 Sum_probs=63.1
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVC-QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWG 266 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~-~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~ 266 (342)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++|+. +++++++|+.+++ .+||+|++||||+
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~~--~~~D~v~~~~p~~ 121 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEIS--GKYDTWIMNPPFG 121 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGCC--CCEEEEEECCCC-
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHCC--CCeeEEEECCCch
Confidence 357899999999999999999885 479999999999999999975 6899999999864 5899999999998
Q ss_pred CCc
Q psy15742 267 GPE 269 (342)
Q Consensus 267 ~~~ 269 (342)
...
T Consensus 122 ~~~ 124 (200)
T 1ne2_A 122 SVV 124 (200)
T ss_dssp ---
T ss_pred hcc
Confidence 753
No 59
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.37 E-value=1.5e-12 Score=117.29 Aligned_cols=96 Identities=18% Similarity=0.253 Sum_probs=78.8
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP~ 265 (342)
+++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++..|++++++++++|+.+++ +.++||+|+++.++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~ 124 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAI 124 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCG
T ss_pred CCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCc
Confidence 46889999999999999999988 55999999999999999999999999778999999998876 45789999999887
Q ss_pred CCCccccccccccccCcC
Q psy15742 266 GGPEYARSSFSIDNIFPE 283 (342)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~ 283 (342)
...+.......+.+++++
T Consensus 125 ~~~~~~~~l~~~~~~Lkp 142 (267)
T 3kkz_A 125 YNIGFERGLNEWRKYLKK 142 (267)
T ss_dssp GGTCHHHHHHHHGGGEEE
T ss_pred eecCHHHHHHHHHHHcCC
Confidence 765332223333444433
No 60
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.37 E-value=6.7e-12 Score=114.29 Aligned_cols=80 Identities=18% Similarity=0.048 Sum_probs=61.0
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCC-EEEEEeC-CHHHHHHHHHHH-----HHcCCC----CcEEEEEcccccc----C-
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQ-KVISIDI-DPAKLRLAQHNA-----SVYGVS----HKIQFIQGDFFAL----A- 251 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~-~v~gvD~-s~~~l~~a~~n~-----~~~gl~----~~i~~~~~D~~~~----~- 251 (342)
.++.+|||+|||+|.+++.+++.+. +|+|+|+ |+.+++.|++|+ +.+++. ++++++..|+.+. .
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 3578999999999999999998865 9999999 899999999999 555553 4688886665432 1
Q ss_pred --CCCCccEEEE-cCCCCC
Q psy15742 252 --PSLQGDVVFL-SPPWGG 267 (342)
Q Consensus 252 --~~~~~D~Ii~-nPP~~~ 267 (342)
+..+||+|++ |++|+.
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~ 176 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFH 176 (281)
T ss_dssp HHSCSSBSEEEEESCCSCG
T ss_pred hccCCCCCEEEEeCcccCh
Confidence 2468999987 877764
No 61
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.37 E-value=1.8e-12 Score=120.16 Aligned_cols=136 Identities=15% Similarity=0.143 Sum_probs=96.8
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVC---QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSP 263 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~---~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nP 263 (342)
+++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++|++.+|++ +++++.+|+.+.+ +.++||+|++++
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~-~v~~~~~d~~~~~~~~~~fD~Iv~~~ 152 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE-NVIFVCGDGYYGVPEFSPYDVIFVTV 152 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGGCCEEEEEECS
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEECChhhccccCCCeEEEEEcC
Confidence 468899999999999999999874 35999999999999999999999985 5999999998854 356899999999
Q ss_pred CCCCCccccccccccccCcCCCCchhhhHhhhcc-CCCceeecCCCCCHHHHHHhhCCCcEEEEecccCCCCCCCcccc
Q psy15742 264 PWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGI-SPNVGYYLPRTSDVFEIFHDSGKKGSFISLTGRQMFSPSQDMET 341 (342)
Q Consensus 264 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~l~~~~~~~~~i~~i~~~~~fp~t~h~e~ 341 (342)
++.... ..+.+++++ ||..++.+.... ....+.. +. .....+...++.+..++|.+.|++.
T Consensus 153 ~~~~~~-----~~~~~~Lkp--gG~lvi~~~~~~~~~~~~~~---------~~-~~~~~~~~~~i~~~~~~p~~~~~~~ 214 (317)
T 1dl5_A 153 GVDEVP-----ETWFTQLKE--GGRVIVPINLKLSRRQPAFL---------FK-KKDPYLVGNYKLETRFITAGGNLGN 214 (317)
T ss_dssp BBSCCC-----HHHHHHEEE--EEEEEEEBCBGGGTBCEEEE---------EE-EETTEEEEEEEEECCCCBCCGGGSC
T ss_pred CHHHHH-----HHHHHhcCC--CcEEEEEECCCCcccceEEE---------EE-EeCCcEEEEEeccEEEEEccCcccc
Confidence 987542 223334433 343333321110 0000110 00 1134577888999999999999874
No 62
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.37 E-value=3.6e-12 Score=116.63 Aligned_cols=78 Identities=26% Similarity=0.255 Sum_probs=68.9
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPPWG 266 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP~~ 266 (342)
.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++++.. . ++++++++|+.+.. +...||.|++|+||.
T Consensus 49 ~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~--~-~~v~vi~gD~l~~~~~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 49 TKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKEL--Y-NNIEIIWGDALKVDLNKLDFNKVVANLPYQ 125 (295)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHH--C-SSEEEEESCTTTSCGGGSCCSEEEEECCGG
T ss_pred CCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhcc--C-CCeEEEECchhhCCcccCCccEEEEeCccc
Confidence 4678999999999999999999999999999999999999999873 2 48999999999865 344799999999997
Q ss_pred CC
Q psy15742 267 GP 268 (342)
Q Consensus 267 ~~ 268 (342)
..
T Consensus 126 is 127 (295)
T 3gru_A 126 IS 127 (295)
T ss_dssp GH
T ss_pred cc
Confidence 54
No 63
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.37 E-value=2.1e-12 Score=115.31 Aligned_cols=82 Identities=20% Similarity=0.270 Sum_probs=73.3
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVC-QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~-~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP~ 265 (342)
+++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++..+|++++++++++|+.+++ +.++||+|+++..+
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 124 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAI 124 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCS
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChH
Confidence 467899999999999999999984 4999999999999999999999999777999999998876 45789999999887
Q ss_pred CCCc
Q psy15742 266 GGPE 269 (342)
Q Consensus 266 ~~~~ 269 (342)
+..+
T Consensus 125 ~~~~ 128 (257)
T 3f4k_A 125 YNIG 128 (257)
T ss_dssp CCCC
T ss_pred hhcC
Confidence 7664
No 64
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.37 E-value=2.3e-12 Score=114.98 Aligned_cols=79 Identities=22% Similarity=0.175 Sum_probs=70.9
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWG 266 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~ 266 (342)
+++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++..|+.++++++++|+.+.+.+++||+|++....+
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~V~~~~~~~ 114 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANEKCDVAACVGATW 114 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSSCEEEEEEESCGG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCCCCCEEEECCChH
Confidence 46889999999999999999987 78999999999999999999999998778999999999876667899999865543
No 65
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.36 E-value=1.8e-12 Score=111.54 Aligned_cols=142 Identities=13% Similarity=0.011 Sum_probs=93.8
Q ss_pred HHhcCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEc
Q psy15742 184 ASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLS 262 (342)
Q Consensus 184 ~~~~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~n 262 (342)
...++++ +|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++...+. +++++++|+.+.+ +.++||+|+++
T Consensus 25 ~~~~~~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~fD~v~~~ 101 (202)
T 2kw5_A 25 ANQIPQG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDIVADAWEGIVSI 101 (202)
T ss_dssp HHHSCSS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSCCTTTCSEEEEE
T ss_pred HHhCCCC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCCCcCCccEEEEE
Confidence 3345567 999999999999999999888999999999999999999988887 7999999998876 45689999996
Q ss_pred CCCCCCcc-ccccccccccCcCCCCchhhhHhhhccCC----CceeecCCCCCHHHHHHhhCCCcEEEEecccC
Q psy15742 263 PPWGGPEY-ARSSFSIDNIFPEQGGGRRLFQVARGISP----NVGYYLPRTSDVFEIFHDSGKKGSFISLTGRQ 331 (342)
Q Consensus 263 PP~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~l~~~~~~~~~i~~i~~~~ 331 (342)
........ ......+.+++++ ||..++........ .............++..++. |++++.+....
T Consensus 102 ~~~~~~~~~~~~l~~~~~~L~p--gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-Gf~v~~~~~~~ 172 (202)
T 2kw5_A 102 FCHLPSSLRQQLYPKVYQGLKP--GGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP-SLNWLIANNLE 172 (202)
T ss_dssp CCCCCHHHHHHHHHHHHTTCCS--SEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS-SSCEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHhcCC--CcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc-CceEEEEEEEE
Confidence 43221110 1122233344444 44433322111000 00000012346777888877 88887765443
No 66
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.36 E-value=6.2e-12 Score=110.95 Aligned_cols=79 Identities=19% Similarity=0.243 Sum_probs=70.8
Q ss_pred CCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCCCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGGP 268 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~~~ 268 (342)
+.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++...+...+++++++|+.+..+..+||+|+++..+...
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 145 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCAI 145 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTTS
T ss_pred CCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhcC
Confidence 4599999999999999999888999999999999999999998766556899999999998777799999998777655
No 67
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.35 E-value=6.2e-12 Score=108.60 Aligned_cols=84 Identities=19% Similarity=0.144 Sum_probs=72.6
Q ss_pred HHHHHhcCCCCeEEeccCCCcHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEE
Q psy15742 181 QHIASRCKASDVVIDGFCGCGGNTIQFAAVC-QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVV 259 (342)
Q Consensus 181 ~~i~~~~~~~~~vLDlgcGtG~~~~~~a~~~-~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~I 259 (342)
+.+...++++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++|+..+++. +++++++|+.+..+ .+||+|
T Consensus 52 ~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~-~~fD~i 129 (205)
T 3grz_A 52 LGIERAMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIY-DIALQKTSLLADVD-GKFDLI 129 (205)
T ss_dssp HHHHHHCSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-CCEEEESSTTTTCC-SCEEEE
T ss_pred HHHHHhccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeccccccCC-CCceEE
Confidence 3444456678899999999999999999874 49999999999999999999999985 49999999988654 689999
Q ss_pred EEcCCCC
Q psy15742 260 FLSPPWG 266 (342)
Q Consensus 260 i~nPP~~ 266 (342)
++++|+.
T Consensus 130 ~~~~~~~ 136 (205)
T 3grz_A 130 VANILAE 136 (205)
T ss_dssp EEESCHH
T ss_pred EECCcHH
Confidence 9999864
No 68
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.35 E-value=1.3e-11 Score=112.18 Aligned_cols=79 Identities=16% Similarity=0.104 Sum_probs=72.7
Q ss_pred CCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCCCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGGP 268 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~~~ 268 (342)
++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++..+++ +++++++|+.+....++||+|+++++++..
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~fD~i~~~~~~~~~ 197 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANIQENYDFIVSTVVFMFL 197 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCCCSCEEEEEECSSGGGS
T ss_pred CCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccccCCccEEEEccchhhC
Confidence 577999999999999999999988999999999999999999999988 899999999987767789999999988755
Q ss_pred c
Q psy15742 269 E 269 (342)
Q Consensus 269 ~ 269 (342)
+
T Consensus 198 ~ 198 (286)
T 3m70_A 198 N 198 (286)
T ss_dssp C
T ss_pred C
Confidence 3
No 69
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.35 E-value=1.7e-12 Score=116.08 Aligned_cols=78 Identities=22% Similarity=0.295 Sum_probs=72.1
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcC
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSP 263 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nP 263 (342)
..++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++|++.+|++++++++++|+.+..+..+||+|++||
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~ 170 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEENVDHVILDL 170 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCCSEEEEEECS
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCCCcCEEEECC
Confidence 356889999999999999999988 78999999999999999999999999767999999999877777899999999
Q ss_pred C
Q psy15742 264 P 264 (342)
Q Consensus 264 P 264 (342)
|
T Consensus 171 ~ 171 (255)
T 3mb5_A 171 P 171 (255)
T ss_dssp S
T ss_pred C
Confidence 8
No 70
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.34 E-value=4.7e-12 Score=106.65 Aligned_cols=76 Identities=26% Similarity=0.458 Sum_probs=69.5
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPP 264 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP 264 (342)
.++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++|+..+++ ++++++++|+.+..+..+||+|++++|
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAEDVLDKLEFNKAFIGGT 109 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHHHGGGCCCSEEEECSC
T ss_pred CCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCccccccCCCCcEEEECCc
Confidence 3578999999999999999999888999999999999999999999998 479999999988555568999999998
No 71
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.34 E-value=8.4e-12 Score=104.89 Aligned_cols=79 Identities=20% Similarity=0.202 Sum_probs=68.6
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCC--CCccEEEEcC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPS--LQGDVVFLSP 263 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~--~~~D~Ii~nP 263 (342)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++|+..+++++++ ++++|+.+..+. .+||+|+++.
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~ 102 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIGG 102 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEECC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEECC
Confidence 45789999999999999999987 789999999999999999999999986688 889998665443 6899999998
Q ss_pred CCCC
Q psy15742 264 PWGG 267 (342)
Q Consensus 264 P~~~ 267 (342)
+.+.
T Consensus 103 ~~~~ 106 (178)
T 3hm2_A 103 GLTA 106 (178)
T ss_dssp -TTC
T ss_pred cccH
Confidence 8654
No 72
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.34 E-value=7.6e-12 Score=111.09 Aligned_cols=77 Identities=17% Similarity=0.211 Sum_probs=71.0
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPP 264 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP 264 (342)
.++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.|++|...+++.++++++.+|+.+.. +...||+|++|||
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 167 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDVR 167 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECSS
T ss_pred CCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECCc
Confidence 4688999999999999999998888999999999999999999999998678999999999876 5668999999988
No 73
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.34 E-value=3.5e-12 Score=116.43 Aligned_cols=80 Identities=21% Similarity=0.299 Sum_probs=71.4
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGG 267 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~~ 267 (342)
.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++++..++..++++++++|+.+.... .||+|++|+||..
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~-~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP-FFDTCVANLPYQI 105 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC-CCSEEEEECCGGG
T ss_pred CCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch-hhcEEEEecCccc
Confidence 457899999999999999999998999999999999999999998777656899999999886433 7999999999976
Q ss_pred C
Q psy15742 268 P 268 (342)
Q Consensus 268 ~ 268 (342)
.
T Consensus 106 ~ 106 (285)
T 1zq9_A 106 S 106 (285)
T ss_dssp H
T ss_pred c
Confidence 4
No 74
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.34 E-value=2.7e-12 Score=124.44 Aligned_cols=95 Identities=24% Similarity=0.386 Sum_probs=80.6
Q ss_pred CHHHHHHHHHHhcC--CCCeEEeccCCCcHHHHHHHHh---------------CCEEEEEeCCHHHHHHHHHHHHHcCCC
Q psy15742 175 TPEKVAQHIASRCK--ASDVVIDGFCGCGGNTIQFAAV---------------CQKVISIDIDPAKLRLAQHNASVYGVS 237 (342)
Q Consensus 175 ~~e~~~~~i~~~~~--~~~~vLDlgcGtG~~~~~~a~~---------------~~~v~gvD~s~~~l~~a~~n~~~~gl~ 237 (342)
||..+++.+.+.+. ++.+|+|+|||||++++.+++. ..+++|+|+++.+++.|+.|+..+|+.
T Consensus 155 TP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~ 234 (445)
T 2okc_A 155 TPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIG 234 (445)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred CcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCC
Confidence 67777777777654 4679999999999999998864 367999999999999999999999984
Q ss_pred C-cEEEEEccccccCCCCCccEEEEcCCCCCCc
Q psy15742 238 H-KIQFIQGDFFALAPSLQGDVVFLSPPWGGPE 269 (342)
Q Consensus 238 ~-~i~~~~~D~~~~~~~~~~D~Ii~nPP~~~~~ 269 (342)
. ++.++++|.+......+||+|++||||++..
T Consensus 235 ~~~~~i~~gD~l~~~~~~~fD~Iv~NPPf~~~~ 267 (445)
T 2okc_A 235 TDRSPIVCEDSLEKEPSTLVDVILANPPFGTRP 267 (445)
T ss_dssp SSCCSEEECCTTTSCCSSCEEEEEECCCSSCCC
T ss_pred cCCCCEeeCCCCCCcccCCcCEEEECCCCCCcc
Confidence 3 6789999998876556899999999999864
No 75
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.33 E-value=2.5e-12 Score=115.46 Aligned_cols=88 Identities=26% Similarity=0.272 Sum_probs=76.3
Q ss_pred HHHHHHHHHhcCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCc
Q psy15742 177 EKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQG 256 (342)
Q Consensus 177 e~~~~~i~~~~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~ 256 (342)
..+++.+...++++.+|||+|||+|.+++.+++.+.+|+|+|+|+.+++.|++|+..+++. ++++++|+.+..+..+|
T Consensus 108 ~~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~~~~~~f 185 (254)
T 2nxc_A 108 RLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAALPFGPF 185 (254)
T ss_dssp HHHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHHGGGCCE
T ss_pred HHHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhcCcCCCC
Confidence 4555666666778899999999999999999998779999999999999999999999984 89999999875545689
Q ss_pred cEEEEcCCCC
Q psy15742 257 DVVFLSPPWG 266 (342)
Q Consensus 257 D~Ii~nPP~~ 266 (342)
|+|++|++.+
T Consensus 186 D~Vv~n~~~~ 195 (254)
T 2nxc_A 186 DLLVANLYAE 195 (254)
T ss_dssp EEEEEECCHH
T ss_pred CEEEECCcHH
Confidence 9999998743
No 76
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.33 E-value=3.5e-12 Score=117.85 Aligned_cols=79 Identities=13% Similarity=0.097 Sum_probs=70.8
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWG 266 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~ 266 (342)
+++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...|+.++++++++|+.+++ ++||+|+++..+.
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~fD~v~~~~~l~ 166 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA--EPVDRIVSIEAFE 166 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC--CCCSEEEEESCGG
T ss_pred CCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC--CCcCEEEEeChHH
Confidence 46789999999999999999987 88999999999999999999999998778999999998874 6899999987665
Q ss_pred CC
Q psy15742 267 GP 268 (342)
Q Consensus 267 ~~ 268 (342)
..
T Consensus 167 ~~ 168 (318)
T 2fk8_A 167 HF 168 (318)
T ss_dssp GT
T ss_pred hc
Confidence 44
No 77
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.33 E-value=2.2e-12 Score=117.33 Aligned_cols=79 Identities=9% Similarity=0.086 Sum_probs=69.9
Q ss_pred CCCCeEEeccCCCcHHHHHHHH-hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAA-VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWG 266 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~-~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~ 266 (342)
+++.+|||+|||+|.++..+++ .+.+|+|+|+|+.+++.|++++...++.++++++.+|+.+++ ++||+|++.-.+.
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~fD~v~~~~~l~ 140 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD--EPVDRIVSIGAFE 140 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC--CCCSEEEEESCGG
T ss_pred CCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC--CCeeEEEEeCchh
Confidence 4678999999999999999995 488999999999999999999998888778999999998775 7899999986655
Q ss_pred CC
Q psy15742 267 GP 268 (342)
Q Consensus 267 ~~ 268 (342)
..
T Consensus 141 ~~ 142 (287)
T 1kpg_A 141 HF 142 (287)
T ss_dssp GT
T ss_pred hc
Confidence 43
No 78
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.32 E-value=5.6e-12 Score=116.75 Aligned_cols=84 Identities=23% Similarity=0.335 Sum_probs=73.7
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-CCCccEEEEc
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-SLQGDVVFLS 262 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-~~~~D~Ii~n 262 (342)
.+++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.+++|++.+|+. +++++++|+.++.. ...||+|++|
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~~~~~~fD~Il~d 194 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIGELNVEFDKILLD 194 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGGGGCCCEEEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhcccccccCCEEEEe
Confidence 456889999999999999999975 378999999999999999999999985 79999999988753 4589999999
Q ss_pred CCCCCCccc
Q psy15742 263 PPWGGPEYA 271 (342)
Q Consensus 263 PP~~~~~~~ 271 (342)
||+.+....
T Consensus 195 ~Pcsg~g~~ 203 (315)
T 1ixk_A 195 APCTGSGTI 203 (315)
T ss_dssp CCTTSTTTC
T ss_pred CCCCCcccc
Confidence 999876543
No 79
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.32 E-value=4.6e-12 Score=111.85 Aligned_cols=143 Identities=11% Similarity=0.044 Sum_probs=92.0
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC----CCCCccEEE
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA----PSLQGDVVF 260 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~----~~~~~D~Ii 260 (342)
+++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+.++++.+ .+++++++|+.+.. ...+||+|+
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~~D~V~ 152 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRMLIAMVDVIF 152 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGGCCCEEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhcccCCcEEEEE
Confidence 45789999999999999999987 379999999999999998888876 37999999998732 346899999
Q ss_pred EcCCCCCCccccc-cccccccCcCCCCchhhhHhhhccCCCceeecCCCCCHHHHHHhhCCCcEEEEecccCCCCCCCcc
Q psy15742 261 LSPPWGGPEYARS-SFSIDNIFPEQGGGRRLFQVARGISPNVGYYLPRTSDVFEIFHDSGKKGSFISLTGRQMFSPSQDM 339 (342)
Q Consensus 261 ~nPP~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~i~~i~~~~~fp~t~h~ 339 (342)
+|+| ..+.... ...+..++++ ||..++.+.........- +...-..++..+...||++..+...+.||.+.++
T Consensus 153 ~~~~--~~~~~~~~~~~~~~~Lkp--gG~l~i~~~~~~~~~~~~--~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~ 226 (233)
T 2ipx_A 153 ADVA--QPDQTRIVALNAHTFLRN--GGHFVISIKANCIDSTAS--AEAVFASEVKKMQQENMKPQEQLTLEPYERDHAV 226 (233)
T ss_dssp ECCC--CTTHHHHHHHHHHHHEEE--EEEEEEEEEHHHHCSSSC--HHHHHHHHHHTTGGGTEEEEEEEECTTTSSSEEE
T ss_pred EcCC--CccHHHHHHHHHHHHcCC--CeEEEEEEcccccccCCC--HHHHHHHHHHHHHHCCCceEEEEecCCccCCcEE
Confidence 9999 1111110 1123334433 343333322110000000 0000011233334568999998899999988653
No 80
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.32 E-value=1.6e-12 Score=122.92 Aligned_cols=94 Identities=19% Similarity=0.243 Sum_probs=72.5
Q ss_pred CHHHHHHHHHHh--cCCCCeEEeccCCCcHHHHHHHHh-CC-EEEEEeCCHHHHHHHHHHH-------HHcCCC-CcEEE
Q psy15742 175 TPEKVAQHIASR--CKASDVVIDGFCGCGGNTIQFAAV-CQ-KVISIDIDPAKLRLAQHNA-------SVYGVS-HKIQF 242 (342)
Q Consensus 175 ~~e~~~~~i~~~--~~~~~~vLDlgcGtG~~~~~~a~~-~~-~v~gvD~s~~~l~~a~~n~-------~~~gl~-~~i~~ 242 (342)
++...+..+... +.++.+|||+|||+|.+++.+|.. +. +|+|||+|+.+++.|+.|+ +.+|+. ++++|
T Consensus 157 t~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVef 236 (438)
T 3uwp_A 157 TSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTL 236 (438)
T ss_dssp THHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEE
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEE
Confidence 333444444443 457899999999999999999975 44 6999999999999999875 345662 58999
Q ss_pred EEccccccCCC---CCccEEEEcCCCCCC
Q psy15742 243 IQGDFFALAPS---LQGDVVFLSPPWGGP 268 (342)
Q Consensus 243 ~~~D~~~~~~~---~~~D~Ii~nPP~~~~ 268 (342)
+++|+.+.+.. ..||+|++|+++...
T Consensus 237 i~GD~~~lp~~d~~~~aDVVf~Nn~~F~p 265 (438)
T 3uwp_A 237 ERGDFLSEEWRERIANTSVIFVNNFAFGP 265 (438)
T ss_dssp EECCTTSHHHHHHHHTCSEEEECCTTCCH
T ss_pred EECcccCCccccccCCccEEEEcccccCc
Confidence 99999887521 379999999997543
No 81
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.32 E-value=2.9e-12 Score=116.26 Aligned_cols=82 Identities=20% Similarity=0.342 Sum_probs=71.0
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh--C-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----CCCccE
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV--C-QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----SLQGDV 258 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~--~-~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----~~~~D~ 258 (342)
.+++.+|||+|||+|+.+..++.. + .+|+|+|+|+.+++.+++|++.+|+. +++++++|+.++.. ...||+
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~~fD~ 159 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYLLKNEIFFDK 159 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhhhhccccCCE
Confidence 356889999999999999999984 3 79999999999999999999999985 89999999987653 568999
Q ss_pred EEEcCCCCCCc
Q psy15742 259 VFLSPPWGGPE 269 (342)
Q Consensus 259 Ii~nPP~~~~~ 269 (342)
|++||||.+..
T Consensus 160 Vl~d~Pcs~~g 170 (274)
T 3ajd_A 160 ILLDAPCSGNI 170 (274)
T ss_dssp EEEEECCC---
T ss_pred EEEcCCCCCCc
Confidence 99999998754
No 82
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.32 E-value=4.5e-12 Score=125.26 Aligned_cols=94 Identities=18% Similarity=0.241 Sum_probs=78.6
Q ss_pred CHHHHHHHHHHhcC------CCCeEEeccCCCcHHHHHHHHh-----CCEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEE
Q psy15742 175 TPEKVAQHIASRCK------ASDVVIDGFCGCGGNTIQFAAV-----CQKVISIDIDPAKLRLAQHNASVYGVS-HKIQF 242 (342)
Q Consensus 175 ~~e~~~~~i~~~~~------~~~~vLDlgcGtG~~~~~~a~~-----~~~v~gvD~s~~~l~~a~~n~~~~gl~-~~i~~ 242 (342)
||..+++.+...+. ++.+|+|++||||++.+.+++. ...++|+|+++.++..|+.|+..+|+. +++.+
T Consensus 201 TP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I 280 (542)
T 3lkd_A 201 TPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFL 280 (542)
T ss_dssp CCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred ccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccce
Confidence 66666666665543 5779999999999999999876 578999999999999999999999985 47899
Q ss_pred EEcccccc--C--CCCCccEEEEcCCCCCC
Q psy15742 243 IQGDFFAL--A--PSLQGDVVFLSPPWGGP 268 (342)
Q Consensus 243 ~~~D~~~~--~--~~~~~D~Ii~nPP~~~~ 268 (342)
.++|.+.. + ...+||+|++||||+..
T Consensus 281 ~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~ 310 (542)
T 3lkd_A 281 HNADTLDEDWPTQEPTNFDGVLMNPPYSAK 310 (542)
T ss_dssp EESCTTTSCSCCSSCCCBSEEEECCCTTCC
T ss_pred EecceecccccccccccccEEEecCCcCCc
Confidence 99999865 3 34689999999999953
No 83
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.31 E-value=5.8e-12 Score=111.32 Aligned_cols=78 Identities=17% Similarity=0.282 Sum_probs=70.3
Q ss_pred CCCeEEeccCCCcHHHHHHHH--hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC---CCCccEEEEcC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAA--VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP---SLQGDVVFLSP 263 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~--~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~---~~~~D~Ii~nP 263 (342)
++.+|||+|||+|..++.+++ .+.+|+|+|+|+.+++.|++|++..++.++++++++|+.+..+ ..+||+|++|+
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 477999999999999999998 4789999999999999999999999997789999999988654 57899999998
Q ss_pred CCC
Q psy15742 264 PWG 266 (342)
Q Consensus 264 P~~ 266 (342)
+..
T Consensus 151 ~~~ 153 (232)
T 3ntv_A 151 AKA 153 (232)
T ss_dssp TSS
T ss_pred cHH
Confidence 744
No 84
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.31 E-value=3.4e-12 Score=113.27 Aligned_cols=77 Identities=12% Similarity=0.005 Sum_probs=67.1
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC---CCCCccEEEEcC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA---PSLQGDVVFLSP 263 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~---~~~~~D~Ii~nP 263 (342)
.+|.+|||+|||+|..+..+++. +.+++|||+|+.+++.|+++....+. +++++.+|+.+.. ++++||.|+.|+
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~--~~~~~~~~a~~~~~~~~~~~FD~i~~D~ 136 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTH--KVIPLKGLWEDVAPTLPDGHFDGILYDT 136 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSS--EEEEEESCHHHHGGGSCTTCEEEEEECC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCC--ceEEEeehHHhhcccccccCCceEEEee
Confidence 45889999999999999999887 57899999999999999999988775 7899999987653 567899999997
Q ss_pred CCC
Q psy15742 264 PWG 266 (342)
Q Consensus 264 P~~ 266 (342)
...
T Consensus 137 ~~~ 139 (236)
T 3orh_A 137 YPL 139 (236)
T ss_dssp CCC
T ss_pred eec
Confidence 754
No 85
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.31 E-value=1.6e-11 Score=107.35 Aligned_cols=83 Identities=24% Similarity=0.319 Sum_probs=72.6
Q ss_pred HHHHHHhcCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccE
Q psy15742 180 AQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDV 258 (342)
Q Consensus 180 ~~~i~~~~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~ 258 (342)
.+.+...++++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++++..++ .+++++++|+.+.. +.++||+
T Consensus 29 ~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~~~D~ 106 (227)
T 1ve3_A 29 EPLLMKYMKKRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLSFEDKTFDY 106 (227)
T ss_dssp HHHHHHSCCSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCCSCTTCEEE
T ss_pred HHHHHHhcCCCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCCCCCCcEEE
Confidence 34555556678899999999999999999988899999999999999999998887 37999999998865 4568999
Q ss_pred EEEcCC
Q psy15742 259 VFLSPP 264 (342)
Q Consensus 259 Ii~nPP 264 (342)
|+++++
T Consensus 107 v~~~~~ 112 (227)
T 1ve3_A 107 VIFIDS 112 (227)
T ss_dssp EEEESC
T ss_pred EEEcCc
Confidence 999999
No 86
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.30 E-value=1.2e-11 Score=114.17 Aligned_cols=85 Identities=26% Similarity=0.381 Sum_probs=71.7
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCC----CCccEE
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPS----LQGDVV 259 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~----~~~D~I 259 (342)
.++|.+|||+|||+|+.+..+|.. ...|+|+|+++.+++.+++|++.+|+. +++++++|+.++... .+||.|
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~~~fD~V 178 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS-CCELAEEDFLAVSPSDPRYHEVHYI 178 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGSCTTCGGGTTEEEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEeCChHhcCccccccCCCCEE
Confidence 457889999999999999999985 479999999999999999999999984 799999999887532 479999
Q ss_pred EEcCCCCCCcccc
Q psy15742 260 FLSPPWGGPEYAR 272 (342)
Q Consensus 260 i~nPP~~~~~~~~ 272 (342)
++|||+.+.....
T Consensus 179 l~D~PcSg~G~~~ 191 (309)
T 2b9e_A 179 LLDPSCSGSGMPS 191 (309)
T ss_dssp EECCCCCC-----
T ss_pred EEcCCcCCCCCCc
Confidence 9999998865433
No 87
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.30 E-value=9.3e-13 Score=118.48 Aligned_cols=86 Identities=16% Similarity=0.239 Sum_probs=71.6
Q ss_pred HHHHHHHHHhcCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCC
Q psy15742 177 EKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQ 255 (342)
Q Consensus 177 e~~~~~i~~~~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~ 255 (342)
+.+.+.+....+.+.+|||+|||+|.++..++..+.+|+|+|+|+.|++.|+++ .+++++++|+.+++ ++++
T Consensus 27 ~~l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~~-------~~v~~~~~~~e~~~~~~~s 99 (257)
T 4hg2_A 27 RALFRWLGEVAPARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALRH-------PRVTYAVAPAEDTGLPPAS 99 (257)
T ss_dssp HHHHHHHHHHSSCSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCCC-------TTEEEEECCTTCCCCCSSC
T ss_pred HHHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhhc-------CCceeehhhhhhhcccCCc
Confidence 445556666666678999999999999999999999999999999999877642 37999999999876 6679
Q ss_pred ccEEEEcCCCCCCc
Q psy15742 256 GDVVFLSPPWGGPE 269 (342)
Q Consensus 256 ~D~Ii~nPP~~~~~ 269 (342)
||+|++.-.++..+
T Consensus 100 fD~v~~~~~~h~~~ 113 (257)
T 4hg2_A 100 VDVAIAAQAMHWFD 113 (257)
T ss_dssp EEEEEECSCCTTCC
T ss_pred ccEEEEeeehhHhh
Confidence 99999987776554
No 88
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.30 E-value=1e-11 Score=108.10 Aligned_cols=133 Identities=16% Similarity=0.005 Sum_probs=91.5
Q ss_pred CCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC---CCCCccEEEEcC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA---PSLQGDVVFLSP 263 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~---~~~~~D~Ii~nP 263 (342)
++.+|||+|||+|.+++.+++. +.+++|+|+|+.+++.|++|+..+++ ++++++++|+.+++ +.++||+|++++
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTSCTTCCSEEEEES
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCCCCCCEEEEEC
Confidence 4779999999999999999987 57999999999999999999999998 58999999998754 456899999998
Q ss_pred CCCCCccccccccccccCcCCCCchhhhHhhhccCCCceeecCCCC-C-HHHHHH-hhCCCcEEEEecc
Q psy15742 264 PWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYLPRTS-D-VFEIFH-DSGKKGSFISLTG 329 (342)
Q Consensus 264 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~-~~~l~~-~~~~~~~i~~i~~ 329 (342)
|-.... .......+. ....+..+.+.+.+++.+++.... . ...+.. +...++.+..+..
T Consensus 120 ~~~~~~---~~~~~~~~~----~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 181 (214)
T 1yzh_A 120 SDPWPK---KRHEKRRLT----YKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNGVWL 181 (214)
T ss_dssp CCCCCS---GGGGGGSTT----SHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEEEES
T ss_pred CCCccc---cchhhhccC----CHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeeeccc
Confidence 832211 000000010 111444555667777777664322 1 122222 2234677776654
No 89
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.30 E-value=1.1e-11 Score=106.10 Aligned_cols=79 Identities=18% Similarity=0.102 Sum_probs=71.0
Q ss_pred CCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCCCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGGP 268 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~~~ 268 (342)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++++..++++ +++++++|+.+.+...+||+|+++.+++..
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~~D~v~~~~~l~~~ 110 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLD-NLHTRVVDLNNLTFDRQYDFILSTVVLMFL 110 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECCGGGCCCCCCEEEEEEESCGGGS
T ss_pred CCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCC-CcEEEEcchhhCCCCCCceEEEEcchhhhC
Confidence 4679999999999999999999889999999999999999999988874 699999999987656689999999877654
No 90
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.30 E-value=8.1e-12 Score=109.44 Aligned_cols=78 Identities=21% Similarity=0.356 Sum_probs=68.2
Q ss_pred CCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC---C----CCccE
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP---S----LQGDV 258 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~---~----~~~D~ 258 (342)
++.+|||+|||+|..++.+|+. +.+|+|+|+|+.+++.|++|++.+|+.++++++++|+.+..+ . .+||+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~ 137 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDM 137 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEE
Confidence 4679999999999999999984 679999999999999999999999997789999999876532 1 58999
Q ss_pred EEEcCCCC
Q psy15742 259 VFLSPPWG 266 (342)
Q Consensus 259 Ii~nPP~~ 266 (342)
|++|.+..
T Consensus 138 V~~d~~~~ 145 (221)
T 3u81_A 138 VFLDHWKD 145 (221)
T ss_dssp EEECSCGG
T ss_pred EEEcCCcc
Confidence 99997643
No 91
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.30 E-value=4.5e-12 Score=115.23 Aligned_cols=81 Identities=23% Similarity=0.240 Sum_probs=71.8
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC--CCCCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA--PSLQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~--~~~~~D~Ii~nPP~ 265 (342)
.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++...|+.++++++++|+.+.+ ..++||+|+++-.+
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVL 146 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCG
T ss_pred CCCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchh
Confidence 4567999999999999999999999999999999999999999999998678999999999886 56789999998776
Q ss_pred CCC
Q psy15742 266 GGP 268 (342)
Q Consensus 266 ~~~ 268 (342)
...
T Consensus 147 ~~~ 149 (285)
T 4htf_A 147 EWV 149 (285)
T ss_dssp GGC
T ss_pred hcc
Confidence 544
No 92
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.29 E-value=1.1e-11 Score=108.83 Aligned_cols=89 Identities=15% Similarity=0.069 Sum_probs=73.8
Q ss_pred HHHHHHHHhcC--CCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEEEccccccC
Q psy15742 178 KVAQHIASRCK--ASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVS-HKIQFIQGDFFALA 251 (342)
Q Consensus 178 ~~~~~i~~~~~--~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~-~~i~~~~~D~~~~~ 251 (342)
.++..+....+ ++.+|||+|||+|..++.+|+. +.+|+++|+|+.+++.|++|++.+|+. ++++++++|+.+..
T Consensus 43 ~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l 122 (221)
T 3dr5_A 43 QLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVM 122 (221)
T ss_dssp HHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHG
T ss_pred HHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHH
Confidence 44445544443 2349999999999999999985 679999999999999999999999997 78999999998864
Q ss_pred C---CCCccEEEEcCCCC
Q psy15742 252 P---SLQGDVVFLSPPWG 266 (342)
Q Consensus 252 ~---~~~~D~Ii~nPP~~ 266 (342)
+ .++||+|++|++..
T Consensus 123 ~~~~~~~fD~V~~d~~~~ 140 (221)
T 3dr5_A 123 SRLANDSYQLVFGQVSPM 140 (221)
T ss_dssp GGSCTTCEEEEEECCCTT
T ss_pred HHhcCCCcCeEEEcCcHH
Confidence 2 56899999998743
No 93
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.29 E-value=5.7e-12 Score=116.30 Aligned_cols=81 Identities=11% Similarity=0.141 Sum_probs=72.6
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP~ 265 (342)
+++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++|+..+|+.++++++++|+.+.+ +.++||+|+++-.+
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 195 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNEST 195 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCG
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCch
Confidence 46789999999999999999998 89999999999999999999999999778999999999875 45789999997665
Q ss_pred CCC
Q psy15742 266 GGP 268 (342)
Q Consensus 266 ~~~ 268 (342)
...
T Consensus 196 ~~~ 198 (312)
T 3vc1_A 196 MYV 198 (312)
T ss_dssp GGS
T ss_pred hhC
Confidence 544
No 94
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.29 E-value=1.1e-11 Score=111.63 Aligned_cols=81 Identities=22% Similarity=0.339 Sum_probs=72.9
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP~ 265 (342)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...|+.++++++.+|+.+.+ ++++||+|++...+
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 139 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESL 139 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechh
Confidence 46889999999999999999986 88999999999999999999999998778999999998875 45689999998887
Q ss_pred CCC
Q psy15742 266 GGP 268 (342)
Q Consensus 266 ~~~ 268 (342)
...
T Consensus 140 ~~~ 142 (273)
T 3bus_A 140 HHM 142 (273)
T ss_dssp TTS
T ss_pred hhC
Confidence 765
No 95
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.29 E-value=2.4e-11 Score=102.99 Aligned_cols=79 Identities=24% Similarity=0.401 Sum_probs=70.5
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCC-CCccEEEEcCCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPS-LQGDVVFLSPPWG 266 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~-~~~D~Ii~nPP~~ 266 (342)
.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++|+..+++.++++++++|+.+..+. ..||+|+++++++
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~ 111 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVGGSGG 111 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEESCCTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCCEEEECCchH
Confidence 467899999999999999999888899999999999999999999999866899999999874333 5899999998864
No 96
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.29 E-value=4.8e-12 Score=122.57 Aligned_cols=84 Identities=25% Similarity=0.258 Sum_probs=73.3
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC--CCCCccEEEE
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA--PSLQGDVVFL 261 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~--~~~~~D~Ii~ 261 (342)
..+|.+|||+|||+|+.+..+|.. ...|+|+|+|+.+++.+++|++.+|+. +.++++|+.++. ....||+|++
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~~~~~~FD~Il~ 176 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAEAFGTYFHRVLL 176 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHHHHCSCEEEEEE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhhhccccCCEEEE
Confidence 456889999999999999999975 368999999999999999999999994 999999998765 2468999999
Q ss_pred cCCCCCCcccc
Q psy15742 262 SPPWGGPEYAR 272 (342)
Q Consensus 262 nPP~~~~~~~~ 272 (342)
|||+.+.....
T Consensus 177 D~PcSg~G~~r 187 (464)
T 3m6w_A 177 DAPCSGEGMFR 187 (464)
T ss_dssp ECCCCCGGGTT
T ss_pred CCCcCCccccc
Confidence 99998865443
No 97
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.29 E-value=9e-12 Score=105.73 Aligned_cols=86 Identities=17% Similarity=0.051 Sum_probs=70.6
Q ss_pred HHHHHHHHHhcCCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCC
Q psy15742 177 EKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSL 254 (342)
Q Consensus 177 e~~~~~i~~~~~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~ 254 (342)
+.+-..+.+++++..+|||+|||+|.+++.++.. +.+++|+|+|+.|++.+++|+..+|+..++++ +|.....+.+
T Consensus 37 d~fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~ 114 (200)
T 3fzg_A 37 NDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKG 114 (200)
T ss_dssp HHHHHHHHHHSCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTS
T ss_pred HHHHHHHHhhcCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCC
Confidence 3444556666777889999999999999999776 66999999999999999999999998656666 6766656677
Q ss_pred CccEEEEcCC
Q psy15742 255 QGDVVFLSPP 264 (342)
Q Consensus 255 ~~D~Ii~nPP 264 (342)
+||+|++.--
T Consensus 115 ~~DvVLa~k~ 124 (200)
T 3fzg_A 115 TYDVVFLLKM 124 (200)
T ss_dssp EEEEEEEETC
T ss_pred CcChhhHhhH
Confidence 8999998533
No 98
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.29 E-value=6.7e-12 Score=112.62 Aligned_cols=77 Identities=17% Similarity=0.192 Sum_probs=66.9
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----CCCccEEEEc
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----SLQGDVVFLS 262 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----~~~~D~Ii~n 262 (342)
.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++++.. .++++++++|+.++.. ..+|| |++|
T Consensus 28 ~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D~~~~~~~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 28 QKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQ---QKNITIYQNDALQFDFSSVKTDKPLR-VVGN 103 (255)
T ss_dssp CTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTT---CTTEEEEESCTTTCCGGGSCCSSCEE-EEEE
T ss_pred CCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhh---CCCcEEEEcchHhCCHHHhccCCCeE-EEec
Confidence 4578999999999999999999999999999999999999999865 2489999999998752 24688 9999
Q ss_pred CCCCCC
Q psy15742 263 PPWGGP 268 (342)
Q Consensus 263 PP~~~~ 268 (342)
|||...
T Consensus 104 lPY~is 109 (255)
T 3tqs_A 104 LPYNIS 109 (255)
T ss_dssp CCHHHH
T ss_pred CCcccC
Confidence 998653
No 99
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.29 E-value=1.3e-11 Score=106.50 Aligned_cols=120 Identities=13% Similarity=-0.001 Sum_probs=87.9
Q ss_pred CCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWG 266 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~ 266 (342)
++.+|||+|||+|.++..++.. +.+++|+|+|+.+++.|++|+..++++ +++++++|+.+..+.++||+|+++.- .
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~D~i~~~~~-~ 142 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLE-NIEPVQSRVEEFPSEPPFDGVISRAF-A 142 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEECCTTTSCCCSCEEEEECSCS-S
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEecchhhCCccCCcCEEEEecc-C
Confidence 3679999999999999999986 789999999999999999999999985 59999999998876678999998642 0
Q ss_pred CCccccccccccccCcCCCCchhhhHhhhccCCCceeecC-CCCCHHHHHHhhCCCcEEEEecc
Q psy15742 267 GPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYLP-RTSDVFEIFHDSGKKGSFISLTG 329 (342)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~l~~~~~~~~~i~~i~~ 329 (342)
+. ...+..+.+.+.+++.+++. .......+..+.. ++++..+..
T Consensus 143 --~~----------------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~-g~~~~~~~~ 187 (207)
T 1jsx_A 143 --SL----------------NDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPE-EYQVESVVK 187 (207)
T ss_dssp --SH----------------HHHHHHHTTSEEEEEEEEEEESSCCHHHHHTSCT-TEEEEEEEE
T ss_pred --CH----------------HHHHHHHHHhcCCCcEEEEEeCCCchHHHHHHhc-CCceeeeee
Confidence 10 01233344445555555442 2234555555544 888776553
No 100
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.29 E-value=4.7e-12 Score=122.42 Aligned_cols=85 Identities=24% Similarity=0.263 Sum_probs=74.3
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC--CCCCccEEEE
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA--PSLQGDVVFL 261 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~--~~~~~D~Ii~ 261 (342)
..+|.+|||+|||+|+.++.+|.. ...|+|+|+|+.+++.+++|++.+|+. ++.++++|+.++. ..+.||+|++
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~l~~~~~~~FD~Il~ 181 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAELVPHFSGFFDRIVV 181 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHHhhhhccccCCEEEE
Confidence 456889999999999999999975 369999999999999999999999995 7999999998764 2468999999
Q ss_pred cCCCCCCcccc
Q psy15742 262 SPPWGGPEYAR 272 (342)
Q Consensus 262 nPP~~~~~~~~ 272 (342)
|||+.+.....
T Consensus 182 DaPCSg~G~~r 192 (456)
T 3m4x_A 182 DAPCSGEGMFR 192 (456)
T ss_dssp ECCCCCGGGTT
T ss_pred CCCCCCccccc
Confidence 99998875444
No 101
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.29 E-value=1.2e-11 Score=107.14 Aligned_cols=78 Identities=19% Similarity=0.153 Sum_probs=70.2
Q ss_pred CeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCCCCCC
Q psy15742 191 DVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPPWGGP 268 (342)
Q Consensus 191 ~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP~~~~ 268 (342)
.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|++++...++.++++++++|+.+.+ +.++||+|+++..++..
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 124 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFW 124 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGGC
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhhc
Confidence 39999999999999999997 77999999999999999999999998778999999999875 45689999998876544
No 102
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.28 E-value=4e-12 Score=111.27 Aligned_cols=77 Identities=13% Similarity=0.128 Sum_probs=68.8
Q ss_pred CCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCC------CCccEE
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPS------LQGDVV 259 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~------~~~D~I 259 (342)
++.+|||+|||+|..+..+++. +.+|+|+|+++.+++.|++|+...|+.++++++++|+.+..+. .+||+|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 4679999999999999999987 6899999999999999999999999977899999999875421 579999
Q ss_pred EEcCCC
Q psy15742 260 FLSPPW 265 (342)
Q Consensus 260 i~nPP~ 265 (342)
++|++.
T Consensus 138 ~~d~~~ 143 (223)
T 3duw_A 138 FIDADK 143 (223)
T ss_dssp EECSCG
T ss_pred EEcCCc
Confidence 999883
No 103
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.28 E-value=1.1e-11 Score=109.56 Aligned_cols=73 Identities=11% Similarity=0.044 Sum_probs=63.9
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEcccccc--C-CCCCccEEEEc
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVC-QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL--A-PSLQGDVVFLS 262 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~-~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~--~-~~~~~D~Ii~n 262 (342)
+++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|+++.+..+. +++++++|+.+. + ++++||+|++|
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~~~fD~V~~d 135 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTH--KVIPLKGLWEDVAPTLPDGHFDGILYD 135 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSS--EEEEEESCHHHHGGGSCTTCEEEEEEC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCC--CeEEEecCHHHhhcccCCCceEEEEEC
Confidence 457899999999999999998764 4899999999999999999987773 899999999887 3 55789999995
No 104
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.28 E-value=4.3e-12 Score=113.87 Aligned_cols=81 Identities=21% Similarity=0.342 Sum_probs=67.1
Q ss_pred CCC--CeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHc-------C-CCCcEEEEEccccccCC--CCC
Q psy15742 188 KAS--DVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVY-------G-VSHKIQFIQGDFFALAP--SLQ 255 (342)
Q Consensus 188 ~~~--~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~-------g-l~~~i~~~~~D~~~~~~--~~~ 255 (342)
+++ .+|||+|||+|..++.+|..+.+|+++|+++.+.+.+++|++.. + +.++++++++|+.++++ ...
T Consensus 85 ~~g~~~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~ 164 (258)
T 2oyr_A 85 KGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPR 164 (258)
T ss_dssp BTTBCCCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSC
T ss_pred cCCCCCEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCccc
Confidence 445 89999999999999999999889999999999877777776533 3 32479999999988753 237
Q ss_pred ccEEEEcCCCCCC
Q psy15742 256 GDVVFLSPPWGGP 268 (342)
Q Consensus 256 ~D~Ii~nPP~~~~ 268 (342)
||+|++||||...
T Consensus 165 fDvV~lDP~y~~~ 177 (258)
T 2oyr_A 165 PQVVYLDPMFPHK 177 (258)
T ss_dssp CSEEEECCCCCCC
T ss_pred CCEEEEcCCCCCc
Confidence 9999999999764
No 105
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.27 E-value=9e-12 Score=110.18 Aligned_cols=135 Identities=16% Similarity=0.106 Sum_probs=92.4
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVC-QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~-~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP~ 265 (342)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++|+..+|+. +++++.+|+.... ....||+|+++.+.
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~Ii~~~~~ 168 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVK-NVHVILGDGSKGFPPKAPYDVIIVTAGA 168 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGGCCEEEEEECSBB
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEECCcccCCCCCCCccEEEECCcH
Confidence 457899999999999999999885 89999999999999999999999985 6999999974333 33459999998875
Q ss_pred CCCccccccccccccCcCCCCchhhhHhhhccCCCceeecCCCCCHHHHHHhhCCCcEEEEecccCCCCCCCccc
Q psy15742 266 GGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYLPRTSDVFEIFHDSGKKGSFISLTGRQMFSPSQDME 340 (342)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~i~~i~~~~~fp~t~h~e 340 (342)
.... ..+.+.+++ ||..++.+........+.. +.+ ...+++...+.+.+++|.+.|..
T Consensus 169 ~~~~-----~~~~~~L~p--gG~lvi~~~~~~~~~~l~~---------~~~-~~~~~~~~~~~~~~f~p~~~~~~ 226 (235)
T 1jg1_A 169 PKIP-----EPLIEQLKI--GGKLIIPVGSYHLWQELLE---------VRK-TKDGIKIKNHGGVAFVPLIGEYG 226 (235)
T ss_dssp SSCC-----HHHHHTEEE--EEEEEEEECSSSSCEEEEE---------EEE-ETTEEEEEEEEEECCCBCBSTTS
T ss_pred HHHH-----HHHHHhcCC--CcEEEEEEecCCCccEEEE---------EEE-eCCeEEEEEeccEEEEEccCCCc
Confidence 5331 122233332 3332222211110001111 111 13567888899999999998864
No 106
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.26 E-value=1.3e-11 Score=107.40 Aligned_cols=80 Identities=18% Similarity=0.255 Sum_probs=70.4
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVC---QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSP 263 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~---~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nP 263 (342)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++..++++ +++++++|+.+.+ +.++||+|+++.
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~ 114 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIPLPDNTVDFIFMAF 114 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCSSCSSCEEEEEEES
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCCCCCCCeeEEEeeh
Confidence 457899999999999999999875 79999999999999999999999985 7999999998875 456899999987
Q ss_pred CCCCC
Q psy15742 264 PWGGP 268 (342)
Q Consensus 264 P~~~~ 268 (342)
.++..
T Consensus 115 ~l~~~ 119 (219)
T 3dh0_A 115 TFHEL 119 (219)
T ss_dssp CGGGC
T ss_pred hhhhc
Confidence 66544
No 107
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.26 E-value=8.8e-12 Score=113.06 Aligned_cols=78 Identities=23% Similarity=0.293 Sum_probs=71.1
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcC
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSP 263 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nP 263 (342)
+.++.+|||+|||+|.+++.+++. +.+|+++|+|+.+++.|++|++.+++.++++++.+|+.+..+...||+|++||
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~V~~~~ 189 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALFLDV 189 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEEEEEECC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCccCEEEECC
Confidence 456889999999999999999987 57999999999999999999999998668999999999876667899999999
Q ss_pred C
Q psy15742 264 P 264 (342)
Q Consensus 264 P 264 (342)
|
T Consensus 190 ~ 190 (277)
T 1o54_A 190 P 190 (277)
T ss_dssp S
T ss_pred c
Confidence 8
No 108
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.26 E-value=6.3e-12 Score=119.30 Aligned_cols=77 Identities=18% Similarity=0.209 Sum_probs=68.2
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--C-CEEEEEeCCHHHHHHHHHHHHHcCCCCc-EEEEEccccccCC---CCCccEEE
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--C-QKVISIDIDPAKLRLAQHNASVYGVSHK-IQFIQGDFFALAP---SLQGDVVF 260 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~-~~v~gvD~s~~~l~~a~~n~~~~gl~~~-i~~~~~D~~~~~~---~~~~D~Ii 260 (342)
++|.+|||+|||+|.+++.+|+. | .+|+++|+|+.+++.+++|++.||++++ ++++++|+.++.. ...||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 35789999999999999999985 3 6899999999999999999999999766 9999999987654 34799999
Q ss_pred EcCC
Q psy15742 261 LSPP 264 (342)
Q Consensus 261 ~nPP 264 (342)
+|||
T Consensus 131 lDP~ 134 (392)
T 3axs_A 131 LDPF 134 (392)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 9994
No 109
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.26 E-value=2.7e-11 Score=106.77 Aligned_cols=74 Identities=18% Similarity=0.135 Sum_probs=64.3
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccc----cCCCCCccEEEE
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVC--QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFA----LAPSLQGDVVFL 261 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~--~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~----~~~~~~~D~Ii~ 261 (342)
+++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|++|++.+ +++.++.+|+.+ .+....||+|+.
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYANIVEKVDVIYE 149 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGTTTSCCEEEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccccccCccEEEEEE
Confidence 457899999999999999999873 79999999999999999998765 489999999987 443368999998
Q ss_pred cCC
Q psy15742 262 SPP 264 (342)
Q Consensus 262 nPP 264 (342)
++|
T Consensus 150 ~~~ 152 (230)
T 1fbn_A 150 DVA 152 (230)
T ss_dssp CCC
T ss_pred ecC
Confidence 876
No 110
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.25 E-value=1.1e-11 Score=112.45 Aligned_cols=77 Identities=14% Similarity=0.173 Sum_probs=69.5
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHc-CCCCcEEEEEccccccCCCCCccEEEEc
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVY-GVSHKIQFIQGDFFALAPSLQGDVVFLS 262 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~-gl~~~i~~~~~D~~~~~~~~~~D~Ii~n 262 (342)
+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++|++.+ |. ++++++++|+.+..+..+||+|++|
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~~~~~~fD~Vi~~ 186 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIADFISDQMYDAVIAD 186 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTTCCCSCCEEEEEEC
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhccCcCCCccEEEEc
Confidence 346789999999999999999987 789999999999999999999988 85 5899999999986666789999999
Q ss_pred CC
Q psy15742 263 PP 264 (342)
Q Consensus 263 PP 264 (342)
+|
T Consensus 187 ~~ 188 (275)
T 1yb2_A 187 IP 188 (275)
T ss_dssp CS
T ss_pred Cc
Confidence 88
No 111
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.25 E-value=2.4e-11 Score=108.49 Aligned_cols=76 Identities=16% Similarity=0.239 Sum_probs=68.4
Q ss_pred CCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC----CCCccEEEE
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP----SLQGDVVFL 261 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~----~~~~D~Ii~ 261 (342)
++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.|++|++..|+.++++++.+|+.+..+ ..+||+|++
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~ 142 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFI 142 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEE
Confidence 4779999999999999999987 689999999999999999999999997789999999987532 348999999
Q ss_pred cCC
Q psy15742 262 SPP 264 (342)
Q Consensus 262 nPP 264 (342)
|.+
T Consensus 143 d~~ 145 (248)
T 3tfw_A 143 DAD 145 (248)
T ss_dssp CSC
T ss_pred CCc
Confidence 986
No 112
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.25 E-value=5.1e-12 Score=116.25 Aligned_cols=88 Identities=18% Similarity=0.154 Sum_probs=75.9
Q ss_pred HHHHHhcCCCCeEEeccCCCcHHHHHHH--Hh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCcc
Q psy15742 181 QHIASRCKASDVVIDGFCGCGGNTIQFA--AV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGD 257 (342)
Q Consensus 181 ~~i~~~~~~~~~vLDlgcGtG~~~~~~a--~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D 257 (342)
+.+...++++.+|||+|||+|.++..++ .. +.+|+|+|+|+.+++.|++|+..+|+.++++++++|+.+.+..++||
T Consensus 110 ~~l~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD 189 (305)
T 3ocj_A 110 RALQRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYD 189 (305)
T ss_dssp HHHHHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEE
T ss_pred HHHHhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeE
Confidence 3344556788999999999999999985 23 67999999999999999999999998777999999999987558999
Q ss_pred EEEEcCCCCCC
Q psy15742 258 VVFLSPPWGGP 268 (342)
Q Consensus 258 ~Ii~nPP~~~~ 268 (342)
+|+++.+++..
T Consensus 190 ~v~~~~~~~~~ 200 (305)
T 3ocj_A 190 LLTSNGLNIYE 200 (305)
T ss_dssp EEECCSSGGGC
T ss_pred EEEECChhhhc
Confidence 99999887654
No 113
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.25 E-value=3.4e-11 Score=108.90 Aligned_cols=78 Identities=17% Similarity=0.131 Sum_probs=68.2
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCC--CCccEEEEcCC
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPS--LQGDVVFLSPP 264 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~--~~~D~Ii~nPP 264 (342)
+.++ +|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++++. + ++++++++|+.++... ..+|.|++|+|
T Consensus 45 ~~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~--~--~~v~vi~~D~l~~~~~~~~~~~~iv~NlP 119 (271)
T 3fut_A 45 PFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLS--G--LPVRLVFQDALLYPWEEVPQGSLLVANLP 119 (271)
T ss_dssp CCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTT--T--SSEEEEESCGGGSCGGGSCTTEEEEEEEC
T ss_pred CCCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC--C--CCEEEEECChhhCChhhccCccEEEecCc
Confidence 3467 99999999999999999999999999999999999999986 2 4899999999987532 36899999999
Q ss_pred CCCCc
Q psy15742 265 WGGPE 269 (342)
Q Consensus 265 ~~~~~ 269 (342)
|...+
T Consensus 120 y~iss 124 (271)
T 3fut_A 120 YHIAT 124 (271)
T ss_dssp SSCCH
T ss_pred ccccH
Confidence 98764
No 114
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.25 E-value=2.5e-11 Score=105.49 Aligned_cols=131 Identities=17% Similarity=0.108 Sum_probs=92.5
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-CCCccEEEEcC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVC---QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-SLQGDVVFLSP 263 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~---~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-~~~~D~Ii~nP 263 (342)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++..+++. +++++.+|+....+ ..+||+|+++.
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~v~~~~ 154 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD-NVIVIVGDGTLGYEPLAPYDRIYTTA 154 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEESCGGGCCGGGCCEEEEEESS
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEECCcccCCCCCCCeeEEEECC
Confidence 457899999999999999999874 89999999999999999999988884 69999999866543 56899999998
Q ss_pred CCCCCccccccccccccCcCCCCchhhhHhhhccCCCceeecCCCCCHHHHHHh--hCCCcEEEEecccCCCCCCCccc
Q psy15742 264 PWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYLPRTSDVFEIFHD--SGKKGSFISLTGRQMFSPSQDME 340 (342)
Q Consensus 264 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~--~~~~~~i~~i~~~~~fp~t~h~e 340 (342)
+++... ..+.+++++ ||..++.+. .. . ..+... ....+....+.+..++|.+.+.+
T Consensus 155 ~~~~~~-----~~~~~~L~p--gG~lv~~~~------------~~-~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 212 (215)
T 2yxe_A 155 AGPKIP-----EPLIRQLKD--GGKLLMPVG------------RY-L-QRLVLAEKRGDEIIIKDCGPVAFVPLVGKEG 212 (215)
T ss_dssp BBSSCC-----HHHHHTEEE--EEEEEEEES------------SS-S-EEEEEEEEETTEEEEEEEEEECCCBCBSTTS
T ss_pred chHHHH-----HHHHHHcCC--CcEEEEEEC------------CC-C-cEEEEEEEeCCEEEEEEeccEEEEecccccc
Confidence 866432 122333333 333222221 11 1 111111 12456777888888888887765
No 115
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.25 E-value=1.8e-11 Score=107.19 Aligned_cols=76 Identities=21% Similarity=0.173 Sum_probs=68.5
Q ss_pred CCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCC-------CCccE
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPS-------LQGDV 258 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~-------~~~D~ 258 (342)
++.+|||+|||+|..++.+++. +.+|+|+|+|+.+++.|+++++.+|+.++++++++|+.+..+. .+||+
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 4679999999999999999987 7899999999999999999999999977899999999775421 68999
Q ss_pred EEEcCC
Q psy15742 259 VFLSPP 264 (342)
Q Consensus 259 Ii~nPP 264 (342)
|++|++
T Consensus 144 v~~~~~ 149 (225)
T 3tr6_A 144 IYIDAD 149 (225)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 999998
No 116
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.25 E-value=3.4e-11 Score=105.01 Aligned_cols=130 Identities=11% Similarity=0.010 Sum_probs=88.8
Q ss_pred CCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC---CCCCccEEEEcC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA---PSLQGDVVFLSP 263 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~---~~~~~D~Ii~nP 263 (342)
++.+|||+|||+|.+++.+|+. +.+++|+|+|+.+++.|++|+..+|+ .+++++++|+.++. +.+.||.|+++.
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~-~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA-QNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC-SSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 3679999999999999999987 78999999999999999999999998 47999999998753 456899999875
Q ss_pred C--CCCCccccccccccccCcCCCCchhhhHhhhccCCCceeecCCCC-C-HHHHHH-hhCCCcEEEEec
Q psy15742 264 P--WGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYLPRTS-D-VFEIFH-DSGKKGSFISLT 328 (342)
Q Consensus 264 P--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~-~~~l~~-~~~~~~~i~~i~ 328 (342)
| |.... ....++.. ...+..+.+.+.+++.+++.... . ...+.. +...++....+.
T Consensus 117 ~~p~~~~~-----~~~~rl~~----~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~~~~ 177 (213)
T 2fca_A 117 SDPWPKKR-----HEKRRLTY----SHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLTYVS 177 (213)
T ss_dssp CCCCCSGG-----GGGGSTTS----HHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCcCcc-----ccccccCc----HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCcccccc
Confidence 4 22110 00011110 11445566677777777663322 1 222222 223356666554
No 117
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.25 E-value=1.4e-11 Score=113.00 Aligned_cols=78 Identities=15% Similarity=0.302 Sum_probs=68.7
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC---C---CCCccEE
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA---P---SLQGDVV 259 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~---~---~~~~D~I 259 (342)
+++.+|||+|||+|+.+..+++. +.+|+|+|+|+.+++.|++|++.+| ++++++++|+.++. . ..+||.|
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~~~g~~~~D~V 102 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLKTLGIEKVDGI 102 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHHHTTCSCEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHHhcCCCCCCEE
Confidence 46789999999999999999987 5899999999999999999999887 48999999998763 1 1479999
Q ss_pred EEcCCCCC
Q psy15742 260 FLSPPWGG 267 (342)
Q Consensus 260 i~nPP~~~ 267 (342)
++|||+..
T Consensus 103 l~D~gvSs 110 (301)
T 1m6y_A 103 LMDLGVST 110 (301)
T ss_dssp EEECSCCH
T ss_pred EEcCccch
Confidence 99999863
No 118
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.24 E-value=2.6e-11 Score=113.76 Aligned_cols=80 Identities=18% Similarity=0.174 Sum_probs=70.6
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVC-QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWG 266 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~-~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~ 266 (342)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+ +++.|+++++.+|+.++++++++|+.++....+||+|++++++.
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGY 127 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEEECCCBT
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCceeEEEEeCchh
Confidence 357899999999999999999884 5999999996 88999999999999779999999999876456899999999865
Q ss_pred CC
Q psy15742 267 GP 268 (342)
Q Consensus 267 ~~ 268 (342)
..
T Consensus 128 ~~ 129 (348)
T 2y1w_A 128 ML 129 (348)
T ss_dssp TB
T ss_pred cC
Confidence 43
No 119
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.24 E-value=2.2e-11 Score=114.01 Aligned_cols=76 Identities=18% Similarity=0.339 Sum_probs=67.9
Q ss_pred CCCeEEeccCCCcHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVC--QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWG 266 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~--~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~ 266 (342)
++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++|+..+++ +++++.+|+.+.. .++||+|++||||+
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~--~~~~~~~d~~~~~-~~~fD~Iv~~~~~~ 272 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV--EGEVFASNVFSEV-KGRFDMIISNPPFH 272 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTTTTC-CSCEEEEEECCCCC
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC--CCEEEEccccccc-cCCeeEEEECCCcc
Confidence 46699999999999999999874 5899999999999999999999988 4678999998765 56899999999998
Q ss_pred C
Q psy15742 267 G 267 (342)
Q Consensus 267 ~ 267 (342)
.
T Consensus 273 ~ 273 (343)
T 2pjd_A 273 D 273 (343)
T ss_dssp S
T ss_pred c
Confidence 5
No 120
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.24 E-value=2.9e-11 Score=117.92 Aligned_cols=82 Identities=20% Similarity=0.259 Sum_probs=72.8
Q ss_pred CCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC--CCCCccEEEEcC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA--PSLQGDVVFLSP 263 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~--~~~~~D~Ii~nP 263 (342)
++.+|||+|||+|+.+..+|.. ...|+|+|+|+.+++.+++|++.+|+. ++.++++|+.++. ....||.|++||
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-nv~~~~~D~~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-NVALTHFDGRVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCCSTTHHHHSTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCCHHHhhhhccccCCEEEECC
Confidence 7889999999999999999986 379999999999999999999999985 7999999998764 346899999999
Q ss_pred CCCCCccc
Q psy15742 264 PWGGPEYA 271 (342)
Q Consensus 264 P~~~~~~~ 271 (342)
|+.+....
T Consensus 196 PcSg~G~~ 203 (479)
T 2frx_A 196 PCSGEGVV 203 (479)
T ss_dssp CCCCGGGG
T ss_pred CcCCcccc
Confidence 99876543
No 121
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.24 E-value=3.3e-11 Score=114.17 Aligned_cols=78 Identities=15% Similarity=0.118 Sum_probs=69.2
Q ss_pred CCCeEEeccCCCcHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccc-cCC--CCCccEEEEcC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVC--QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFA-LAP--SLQGDVVFLSP 263 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~--~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~-~~~--~~~~D~Ii~nP 263 (342)
++.+|||+| |+|.+++.++..+ .+|+|+|+|+.+++.|++|++.+|+. +++++++|+.+ ++. .++||+|++||
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhccCCccEEEECC
Confidence 478999999 9999999999874 69999999999999999999999986 89999999998 432 35899999999
Q ss_pred CCCCC
Q psy15742 264 PWGGP 268 (342)
Q Consensus 264 P~~~~ 268 (342)
||+..
T Consensus 250 p~~~~ 254 (373)
T 2qm3_A 250 PETLE 254 (373)
T ss_dssp CSSHH
T ss_pred CCchH
Confidence 98753
No 122
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.24 E-value=2.9e-11 Score=106.68 Aligned_cols=140 Identities=14% Similarity=0.049 Sum_probs=90.7
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC----CCCCccEE
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA----PSLQGDVV 259 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~----~~~~~D~I 259 (342)
+++|.+|||+|||+|.++..+|+. ..+|+|+|+++.|++.++++++..+ ++..+.+|..+.. ....+|+|
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~---ni~~V~~d~~~p~~~~~~~~~vDvV 151 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRR---NIFPILGDARFPEKYRHLVEGVDGL 151 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCT---TEEEEESCTTCGGGGTTTCCCEEEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhc---CeeEEEEeccCccccccccceEEEE
Confidence 468999999999999999999986 4689999999999999999987543 7899999887642 34589999
Q ss_pred EEcCCCCCCccccccccccccCcCCCCchhhhHh-hhccCCCceeecCCCCC-HHHHHHhhCCCcEEEEecccCCCCCC
Q psy15742 260 FLSPPWGGPEYARSSFSIDNIFPEQGGGRRLFQV-ARGISPNVGYYLPRTSD-VFEIFHDSGKKGSFISLTGRQMFSPS 336 (342)
Q Consensus 260 i~nPP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~-~~~l~~~~~~~~~i~~i~~~~~fp~t 336 (342)
++|.|+.... ......+...+++ ||..++.+ .+.. ....|.... ......+...||++.+.....-|+.+
T Consensus 152 f~d~~~~~~~-~~~l~~~~r~LKp--GG~lvI~ik~r~~----d~~~p~~~~~~~ev~~L~~~GF~l~e~i~L~pf~~~ 223 (233)
T 4df3_A 152 YADVAQPEQA-AIVVRNARFFLRD--GGYMLMAIKARSI----DVTTEPSEVYKREIKTLMDGGLEIKDVVHLDPFDRD 223 (233)
T ss_dssp EECCCCTTHH-HHHHHHHHHHEEE--EEEEEEEEECCHH----HHHTCCCHHHHHHHHHHHHTTCCEEEEEECTTTSTT
T ss_pred EEeccCChhH-HHHHHHHHHhccC--CCEEEEEEecccC----CCCCChHHHHHHHHHHHHHCCCEEEEEEccCCCCCc
Confidence 9998866421 1112222334433 33322211 0000 000011111 22333445678999888877777764
No 123
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.24 E-value=2.8e-11 Score=114.60 Aligned_cols=78 Identities=22% Similarity=0.212 Sum_probs=68.4
Q ss_pred CCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHc---------------CCCCcEEEEEccccccC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVY---------------GVSHKIQFIQGDFFALA 251 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~---------------gl~~~i~~~~~D~~~~~ 251 (342)
++.+|||+|||+|.+++.+|+. +.+|+++|+|+.+++.+++|++.+ |+. +++++++|+.++.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-TIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-EEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-ceEEEcCcHHHHH
Confidence 4789999999999999999987 468999999999999999999999 884 4999999998765
Q ss_pred C--CCCccEEEEcCCCCC
Q psy15742 252 P--SLQGDVVFLSPPWGG 267 (342)
Q Consensus 252 ~--~~~~D~Ii~nPP~~~ 267 (342)
. ...||+|++|||+..
T Consensus 126 ~~~~~~fD~I~lDP~~~~ 143 (378)
T 2dul_A 126 AERHRYFHFIDLDPFGSP 143 (378)
T ss_dssp HHSTTCEEEEEECCSSCC
T ss_pred HhccCCCCEEEeCCCCCH
Confidence 2 347999999998643
No 124
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.24 E-value=1.2e-11 Score=113.36 Aligned_cols=91 Identities=14% Similarity=0.106 Sum_probs=73.6
Q ss_pred HHHHHHHHhc-CCCCeEEeccCCCcHHHHHHHH---hCCEEEEEeCCHHHHHHHHHHHHHc-CCCCcEEEEEccccccC-
Q psy15742 178 KVAQHIASRC-KASDVVIDGFCGCGGNTIQFAA---VCQKVISIDIDPAKLRLAQHNASVY-GVSHKIQFIQGDFFALA- 251 (342)
Q Consensus 178 ~~~~~i~~~~-~~~~~vLDlgcGtG~~~~~~a~---~~~~v~gvD~s~~~l~~a~~n~~~~-gl~~~i~~~~~D~~~~~- 251 (342)
.+.+.+.... +++.+|||+|||+|.++..+++ .+.+|+|+|+|+.+++.|+++++.. +...+++++++|+.+++
T Consensus 24 ~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~ 103 (299)
T 3g5t_A 24 DFYKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKF 103 (299)
T ss_dssp HHHHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGG
T ss_pred HHHHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCc
Confidence 3334444443 4688999999999999999995 5889999999999999999999887 44468999999998865
Q ss_pred CC------CCccEEEEcCCCCCC
Q psy15742 252 PS------LQGDVVFLSPPWGGP 268 (342)
Q Consensus 252 ~~------~~~D~Ii~nPP~~~~ 268 (342)
+. ++||+|+++..++..
T Consensus 104 ~~~~~~~~~~fD~V~~~~~l~~~ 126 (299)
T 3g5t_A 104 LGADSVDKQKIDMITAVECAHWF 126 (299)
T ss_dssp GCTTTTTSSCEEEEEEESCGGGS
T ss_pred cccccccCCCeeEEeHhhHHHHh
Confidence 33 689999998776655
No 125
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.24 E-value=1.7e-11 Score=111.97 Aligned_cols=80 Identities=14% Similarity=0.201 Sum_probs=71.5
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP~ 265 (342)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...|+.++++++++|+.+.+ ++++||+|++.-..
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 160 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAF 160 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCG
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchh
Confidence 56889999999999999999987 88999999999999999999999998778999999999876 45689999997665
Q ss_pred CC
Q psy15742 266 GG 267 (342)
Q Consensus 266 ~~ 267 (342)
..
T Consensus 161 ~~ 162 (297)
T 2o57_A 161 LH 162 (297)
T ss_dssp GG
T ss_pred hh
Confidence 44
No 126
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.23 E-value=1e-11 Score=111.03 Aligned_cols=76 Identities=20% Similarity=0.239 Sum_probs=68.3
Q ss_pred CCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC--------CCCcc
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP--------SLQGD 257 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~--------~~~~D 257 (342)
++.+|||+|||+|..++.+++. +.+|+++|+|+.+++.|++|++..|+.++++++.+|+.+..+ .++||
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 4679999999999999999986 689999999999999999999999987789999999987532 46899
Q ss_pred EEEEcCC
Q psy15742 258 VVFLSPP 264 (342)
Q Consensus 258 ~Ii~nPP 264 (342)
+|++|.+
T Consensus 159 ~V~~d~~ 165 (247)
T 1sui_A 159 FIFVDAD 165 (247)
T ss_dssp EEEECSC
T ss_pred EEEEcCc
Confidence 9999976
No 127
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.23 E-value=3.3e-11 Score=109.72 Aligned_cols=75 Identities=23% Similarity=0.254 Sum_probs=66.0
Q ss_pred hcCCCCeEEeccCCCcHHH-HHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEc
Q psy15742 186 RCKASDVVIDGFCGCGGNT-IQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLS 262 (342)
Q Consensus 186 ~~~~~~~vLDlgcGtG~~~-~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~n 262 (342)
.++++.+|||+|||+|.++ +.+|+. +.+|+|+|+|+++++.|+++++..|+ ++++++++|+.+++ +.+||+|+++
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~-d~~FDvV~~~ 195 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID-GLEFDVLMVA 195 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG-GCCCSEEEEC
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC-CCCcCEEEEC
Confidence 4567999999999998765 556664 88999999999999999999999999 79999999999875 5789999985
No 128
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.23 E-value=1e-11 Score=119.12 Aligned_cols=84 Identities=24% Similarity=0.406 Sum_probs=68.4
Q ss_pred HHHHHHHHHHhcC--CCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEcccccc
Q psy15742 176 PEKVAQHIASRCK--ASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL 250 (342)
Q Consensus 176 ~e~~~~~i~~~~~--~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~ 250 (342)
|+.+++.+.+.+. ++.+|||+|||+|.+++.+++. +.+++|+|+++.+++.| .+++++++|+.++
T Consensus 24 P~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~~~ 93 (421)
T 2ih2_A 24 PPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFLLW 93 (421)
T ss_dssp CHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGGGC
T ss_pred CHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChhhc
Confidence 3444444444443 3669999999999999999974 57999999999999877 3789999999998
Q ss_pred CCCCCccEEEEcCCCCCCc
Q psy15742 251 APSLQGDVVFLSPPWGGPE 269 (342)
Q Consensus 251 ~~~~~~D~Ii~nPP~~~~~ 269 (342)
.+..+||+|++||||....
T Consensus 94 ~~~~~fD~Ii~NPPy~~~~ 112 (421)
T 2ih2_A 94 EPGEAFDLILGNPPYGIVG 112 (421)
T ss_dssp CCSSCEEEEEECCCCCCBS
T ss_pred CccCCCCEEEECcCccCcc
Confidence 7667899999999998764
No 129
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.23 E-value=1.4e-11 Score=122.01 Aligned_cols=96 Identities=23% Similarity=0.347 Sum_probs=78.4
Q ss_pred CCHHHHHHHHHHhcCC-CCeEEeccCCCcHHHHHHHHh-----------------CCEEEEEeCCHHHHHHHHHHHHHcC
Q psy15742 174 VTPEKVAQHIASRCKA-SDVVIDGFCGCGGNTIQFAAV-----------------CQKVISIDIDPAKLRLAQHNASVYG 235 (342)
Q Consensus 174 ~~~e~~~~~i~~~~~~-~~~vLDlgcGtG~~~~~~a~~-----------------~~~v~gvD~s~~~l~~a~~n~~~~g 235 (342)
.||..+++.+...+.+ ..+|+|++||||++.+.+++. ...++|+|+++.+++.|+.|+..+|
T Consensus 228 yTP~~Vv~lmv~ll~p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g 307 (544)
T 3khk_A 228 YTPKSIVTLIVEMLEPYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG 307 (544)
T ss_dssp CCCHHHHHHHHHHHCCCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT
T ss_pred eCCHHHHHHHHHHHhcCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC
Confidence 4777788887776643 349999999999999988642 3589999999999999999999999
Q ss_pred CCCcEEEEEccccccC--CCCCccEEEEcCCCCCCc
Q psy15742 236 VSHKIQFIQGDFFALA--PSLQGDVVFLSPPWGGPE 269 (342)
Q Consensus 236 l~~~i~~~~~D~~~~~--~~~~~D~Ii~nPP~~~~~ 269 (342)
+..++.+.++|.+..+ +..+||+|++||||+...
T Consensus 308 i~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~ 343 (544)
T 3khk_A 308 IDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKD 343 (544)
T ss_dssp CCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCS
T ss_pred CCcccceeccchhcCcccccccccEEEECCCcCCcc
Confidence 8656555899987654 346899999999999753
No 130
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.22 E-value=1.7e-11 Score=115.07 Aligned_cols=79 Identities=20% Similarity=0.142 Sum_probs=69.8
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVC-QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~-~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP~ 265 (342)
.++.+|||+|||+|.++..+++.+ .+|+|+|+| .+++.|+++++.+++.++++++++|+.++. +.++||+|+++++.
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 357899999999999999999985 599999999 599999999999999778999999999875 45789999999864
Q ss_pred CC
Q psy15742 266 GG 267 (342)
Q Consensus 266 ~~ 267 (342)
..
T Consensus 144 ~~ 145 (349)
T 3q7e_A 144 YC 145 (349)
T ss_dssp BT
T ss_pred cc
Confidence 43
No 131
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.22 E-value=3.4e-11 Score=106.30 Aligned_cols=87 Identities=18% Similarity=0.279 Sum_probs=73.3
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCc
Q psy15742 178 KVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQG 256 (342)
Q Consensus 178 ~~~~~i~~~~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~ 256 (342)
.+++.+...++++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++.. ..+++++++|+.+.+ +..+|
T Consensus 42 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~f 117 (242)
T 3l8d_A 42 TIIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGE----GPDLSFIKGDLSSLPFENEQF 117 (242)
T ss_dssp THHHHHHHHSCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTTC----BTTEEEEECBTTBCSSCTTCE
T ss_pred HHHHHHHHHcCCCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhcc----cCCceEEEcchhcCCCCCCCc
Confidence 3445556666778899999999999999999999999999999999999998752 247999999999876 46789
Q ss_pred cEEEEcCCCCCC
Q psy15742 257 DVVFLSPPWGGP 268 (342)
Q Consensus 257 D~Ii~nPP~~~~ 268 (342)
|+|++...++..
T Consensus 118 D~v~~~~~l~~~ 129 (242)
T 3l8d_A 118 EAIMAINSLEWT 129 (242)
T ss_dssp EEEEEESCTTSS
T ss_pred cEEEEcChHhhc
Confidence 999998777655
No 132
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.22 E-value=2.5e-11 Score=114.60 Aligned_cols=75 Identities=16% Similarity=0.175 Sum_probs=68.3
Q ss_pred CCCeEEeccCCCcHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVC-QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPP 264 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~-~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP 264 (342)
+|++|||+|||||.+++.+|+.| .+|+|||.|+ +++.|+++++.||+.++++++++|+.++....++|+|++++-
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~ 158 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWM 158 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCC
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeecc
Confidence 57899999999999999999984 6899999996 899999999999998899999999998875678999999765
No 133
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.22 E-value=4.2e-11 Score=106.87 Aligned_cols=77 Identities=23% Similarity=0.229 Sum_probs=69.3
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHc-CCCCcEEEEEcccccc-CCCCCccEEEE
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVY-GVSHKIQFIQGDFFAL-APSLQGDVVFL 261 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~-gl~~~i~~~~~D~~~~-~~~~~~D~Ii~ 261 (342)
+.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|++|++.+ |. ++++++++|+.+. .+...||+|++
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~~~~~~~~D~v~~ 172 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV-ENVRFHLGKLEEAELEEAAYDGVAL 172 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC-CCEEEEESCGGGCCCCTTCEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC-CCEEEEECchhhcCCCCCCcCEEEE
Confidence 357889999999999999999987 689999999999999999999988 74 5899999999987 45568999999
Q ss_pred cCC
Q psy15742 262 SPP 264 (342)
Q Consensus 262 nPP 264 (342)
|+|
T Consensus 173 ~~~ 175 (258)
T 2pwy_A 173 DLM 175 (258)
T ss_dssp ESS
T ss_pred CCc
Confidence 988
No 134
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.22 E-value=6.3e-11 Score=114.95 Aligned_cols=85 Identities=19% Similarity=0.254 Sum_probs=74.4
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh--C-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC---CCCccEEE
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV--C-QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP---SLQGDVVF 260 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~--~-~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~---~~~~D~Ii 260 (342)
.+++.+|||+|||+|+.+..++.. + .+|+|+|+|+.+++.+++|++.+|+. +++++++|+.+..+ ++.||+|+
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~fD~Vl 335 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK-IVKPLVKDARKAPEIIGEEVADKVL 335 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC-SEEEECSCTTCCSSSSCSSCEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC-cEEEEEcChhhcchhhccCCCCEEE
Confidence 567889999999999999999985 3 79999999999999999999999984 79999999988752 25799999
Q ss_pred EcCCCCCCcccc
Q psy15742 261 LSPPWGGPEYAR 272 (342)
Q Consensus 261 ~nPP~~~~~~~~ 272 (342)
+|||+.+.....
T Consensus 336 ~D~Pcsg~g~~~ 347 (450)
T 2yxl_A 336 LDAPCTSSGTIG 347 (450)
T ss_dssp EECCCCCGGGTT
T ss_pred EcCCCCCCeeec
Confidence 999998875544
No 135
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.22 E-value=3.7e-11 Score=103.36 Aligned_cols=73 Identities=15% Similarity=0.147 Sum_probs=64.5
Q ss_pred CCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCCCCCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPPWGGP 268 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP~~~~ 268 (342)
+.+|||+|||+|.++..++..+.+|+|+|+|+.+++.|+++. .+++++++|+.+++ +.++||+|+++..++..
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 115 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTH------PSVTFHHGTITDLSDSPKRWAGLLAWYSLIHM 115 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHC------TTSEEECCCGGGGGGSCCCEEEEEEESSSTTC
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC------CCCeEEeCcccccccCCCCeEEEEehhhHhcC
Confidence 679999999999999999999889999999999999999883 37899999999876 45789999998776654
No 136
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.21 E-value=2.2e-11 Score=109.08 Aligned_cols=79 Identities=22% Similarity=0.275 Sum_probs=69.1
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPPWG 266 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP~~ 266 (342)
.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++...+++ +++++++|+.+++ ++++||+|+++-..+
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~l~~~~~~fD~V~~~~~l~ 114 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAEQMPFTDERFHIVTCRIAAH 114 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-CCCSCTTCEEEEEEESCGG
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHHhCCCCCCCEEEEEEhhhhH
Confidence 45789999999999999999998889999999999999999999988874 7999999998875 457899999986554
Q ss_pred C
Q psy15742 267 G 267 (342)
Q Consensus 267 ~ 267 (342)
.
T Consensus 115 ~ 115 (260)
T 1vl5_A 115 H 115 (260)
T ss_dssp G
T ss_pred h
Confidence 4
No 137
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.21 E-value=1.2e-11 Score=111.00 Aligned_cols=82 Identities=15% Similarity=0.182 Sum_probs=69.8
Q ss_pred HHHHHhcCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEE
Q psy15742 181 QHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVF 260 (342)
Q Consensus 181 ~~i~~~~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii 260 (342)
+.+....+++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++. +++++++|+.+++...+||+|+
T Consensus 42 ~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~~~~fD~v~ 115 (263)
T 3pfg_A 42 ALVRRHSPKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNP------DAVLHHGDMRDFSLGRRFSAVT 115 (263)
T ss_dssp HHHHHHCTTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCCCSCCEEEEE
T ss_pred HHHHhhCCCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCC------CCEEEECChHHCCccCCcCEEE
Confidence 4444555667899999999999999999998899999999999999999863 6899999999887677999999
Q ss_pred EcC-CCCCC
Q psy15742 261 LSP-PWGGP 268 (342)
Q Consensus 261 ~nP-P~~~~ 268 (342)
++. .++..
T Consensus 116 ~~~~~l~~~ 124 (263)
T 3pfg_A 116 CMFSSIGHL 124 (263)
T ss_dssp ECTTGGGGS
T ss_pred EcCchhhhc
Confidence 986 55543
No 138
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.21 E-value=2.9e-11 Score=105.94 Aligned_cols=81 Identities=21% Similarity=0.088 Sum_probs=69.1
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh-C--CEEEEEeCCHHHHHHHHHHHHHcCC----CCcEEEEEccccccC-CCCCccE
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV-C--QKVISIDIDPAKLRLAQHNASVYGV----SHKIQFIQGDFFALA-PSLQGDV 258 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~-~--~~v~gvD~s~~~l~~a~~n~~~~gl----~~~i~~~~~D~~~~~-~~~~~D~ 258 (342)
++++.+|||+|||+|..+..+++. + .+|+|+|+|+.+++.|++|+..+++ .++++++++|+.... ....||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 456889999999999999999986 3 6999999999999999999988764 358999999998654 3458999
Q ss_pred EEEcCCCCC
Q psy15742 259 VFLSPPWGG 267 (342)
Q Consensus 259 Ii~nPP~~~ 267 (342)
|+++.|+..
T Consensus 155 i~~~~~~~~ 163 (226)
T 1i1n_A 155 IHVGAAAPV 163 (226)
T ss_dssp EEECSBBSS
T ss_pred EEECCchHH
Confidence 999988643
No 139
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.21 E-value=5.8e-11 Score=105.88 Aligned_cols=76 Identities=17% Similarity=0.231 Sum_probs=65.5
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCC--CCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPS--LQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~--~~~D~Ii~nPP~ 265 (342)
.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.+++|+... ++++++++|+.+++.. ..| .|++||||
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~~~~~~~~~-~vv~nlPy 104 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDILQFKFPKNQSY-KIFGNIPY 104 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTTC---CSEEEECCCGGGCCCCSSCCC-EEEEECCG
T ss_pred CCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhccC---CCeEEEEChHHhCCcccCCCe-EEEEeCCc
Confidence 35789999999999999999999999999999999999999998642 4899999999987532 244 68999999
Q ss_pred CC
Q psy15742 266 GG 267 (342)
Q Consensus 266 ~~ 267 (342)
..
T Consensus 105 ~~ 106 (244)
T 1qam_A 105 NI 106 (244)
T ss_dssp GG
T ss_pred cc
Confidence 64
No 140
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.20 E-value=4.6e-11 Score=103.25 Aligned_cols=82 Identities=18% Similarity=0.166 Sum_probs=68.6
Q ss_pred HHHhcCCCCeEEeccCCCcHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEE
Q psy15742 183 IASRCKASDVVIDGFCGCGGNTIQFAAVCQ-KVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVF 260 (342)
Q Consensus 183 i~~~~~~~~~vLDlgcGtG~~~~~~a~~~~-~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii 260 (342)
+...++++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++... . ++++++++|+.+.+ +.++||+|+
T Consensus 36 l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~--~-~~i~~~~~d~~~~~~~~~~fD~v~ 112 (215)
T 2pxx_A 36 LEPELRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH--V-PQLRWETMDVRKLDFPSASFDVVL 112 (215)
T ss_dssp HGGGCCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT--C-TTCEEEECCTTSCCSCSSCEEEEE
T ss_pred HHHhcCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc--C-CCcEEEEcchhcCCCCCCcccEEE
Confidence 334456688999999999999999998865 899999999999999999864 2 47899999998864 456899999
Q ss_pred EcCCCCC
Q psy15742 261 LSPPWGG 267 (342)
Q Consensus 261 ~nPP~~~ 267 (342)
++++++.
T Consensus 113 ~~~~~~~ 119 (215)
T 2pxx_A 113 EKGTLDA 119 (215)
T ss_dssp EESHHHH
T ss_pred ECcchhh
Confidence 9988643
No 141
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.20 E-value=1.6e-11 Score=106.44 Aligned_cols=78 Identities=17% Similarity=0.029 Sum_probs=67.7
Q ss_pred HHhcCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcC
Q psy15742 184 ASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSP 263 (342)
Q Consensus 184 ~~~~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nP 263 (342)
...++++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++ +++++.+|+.+.++.++||+|+++.
T Consensus 38 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~~~~fD~v~~~~ 110 (211)
T 3e23_A 38 LGELPAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL-------GRPVRTMLFHQLDAIDAYDAVWAHA 110 (211)
T ss_dssp HTTSCTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCCCCSCEEEEEECS
T ss_pred HHhcCCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc-------CCceEEeeeccCCCCCcEEEEEecC
Confidence 334556889999999999999999999899999999999999999987 3568899999888778999999987
Q ss_pred CCCCC
Q psy15742 264 PWGGP 268 (342)
Q Consensus 264 P~~~~ 268 (342)
.+...
T Consensus 111 ~l~~~ 115 (211)
T 3e23_A 111 CLLHV 115 (211)
T ss_dssp CGGGS
T ss_pred chhhc
Confidence 76554
No 142
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.20 E-value=3.3e-11 Score=119.33 Aligned_cols=95 Identities=22% Similarity=0.305 Sum_probs=77.2
Q ss_pred CHHHHHHHHHHhcC--CCCeEEeccCCCcHHHHHHHHh--------------------CCEEEEEeCCHHHHHHHHHHHH
Q psy15742 175 TPEKVAQHIASRCK--ASDVVIDGFCGCGGNTIQFAAV--------------------CQKVISIDIDPAKLRLAQHNAS 232 (342)
Q Consensus 175 ~~e~~~~~i~~~~~--~~~~vLDlgcGtG~~~~~~a~~--------------------~~~v~gvD~s~~~l~~a~~n~~ 232 (342)
||..+++.+...+. ++.+|+|++||||++.+.+++. ...++|+|+++.+++.|+.|+.
T Consensus 153 TP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~ 232 (541)
T 2ar0_A 153 TPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCL 232 (541)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHH
Confidence 56666666666543 4679999999999999998764 1379999999999999999999
Q ss_pred HcCCCC----cEEEEEccccccC--CCCCccEEEEcCCCCCCc
Q psy15742 233 VYGVSH----KIQFIQGDFFALA--PSLQGDVVFLSPPWGGPE 269 (342)
Q Consensus 233 ~~gl~~----~i~~~~~D~~~~~--~~~~~D~Ii~nPP~~~~~ 269 (342)
.+|+.. ++.+.++|.+... ...+||+|++||||++..
T Consensus 233 l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~ 275 (541)
T 2ar0_A 233 LHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAA 275 (541)
T ss_dssp TTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCS
T ss_pred HhCCCccccccCCeEeCCCcccccccccCCeEEEECCCccccc
Confidence 999853 2789999988653 345899999999999864
No 143
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.20 E-value=3e-11 Score=105.31 Aligned_cols=80 Identities=15% Similarity=0.114 Sum_probs=68.7
Q ss_pred CCCeEEeccCCCcHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCC----cEEEEEccccccC-CCCCccEEEE
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVC--QKVISIDIDPAKLRLAQHNASVYGVSH----KIQFIQGDFFALA-PSLQGDVVFL 261 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~--~~v~gvD~s~~~l~~a~~n~~~~gl~~----~i~~~~~D~~~~~-~~~~~D~Ii~ 261 (342)
++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++..+++++ +++++++|+.... +..+||+|++
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~ 108 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATV 108 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEE
Confidence 57799999999999999999875 699999999999999999998887754 7999999996654 3468999999
Q ss_pred cCCCCCC
Q psy15742 262 SPPWGGP 268 (342)
Q Consensus 262 nPP~~~~ 268 (342)
+-.+...
T Consensus 109 ~~~l~~~ 115 (219)
T 3jwg_A 109 IEVIEHL 115 (219)
T ss_dssp ESCGGGC
T ss_pred HHHHHhC
Confidence 7766554
No 144
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.19 E-value=7.8e-11 Score=111.67 Aligned_cols=76 Identities=18% Similarity=0.137 Sum_probs=69.5
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQ-KVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPP 264 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~-~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP 264 (342)
.++.+|||+|||+|.+++.+++.+. +|+|+|+| .+++.|+++++.+++.++++++++|+.++....+||+|++++.
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~ 138 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWM 138 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCC
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcCh
Confidence 4578999999999999999999865 99999999 9999999999999998789999999998865578999999984
No 145
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.19 E-value=9e-11 Score=102.15 Aligned_cols=80 Identities=19% Similarity=0.174 Sum_probs=68.6
Q ss_pred CCCeEEeccCCCcHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCC----cEEEEEccccccC-CCCCccEEEE
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVC--QKVISIDIDPAKLRLAQHNASVYGVSH----KIQFIQGDFFALA-PSLQGDVVFL 261 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~--~~v~gvD~s~~~l~~a~~n~~~~gl~~----~i~~~~~D~~~~~-~~~~~D~Ii~ 261 (342)
++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++..+++.+ +++++++|+.... +.++||+|++
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 108 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATV 108 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEee
Confidence 57799999999999999999874 699999999999999999998888754 7999999986554 3358999999
Q ss_pred cCCCCCC
Q psy15742 262 SPPWGGP 268 (342)
Q Consensus 262 nPP~~~~ 268 (342)
+-.+...
T Consensus 109 ~~~l~~~ 115 (217)
T 3jwh_A 109 IEVIEHL 115 (217)
T ss_dssp ESCGGGC
T ss_pred HHHHHcC
Confidence 8776544
No 146
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.19 E-value=2.6e-11 Score=106.71 Aligned_cols=79 Identities=15% Similarity=0.111 Sum_probs=69.8
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~ 265 (342)
.++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|++++...+ +++++++|+.+.+..++||+|+++.++
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~~~fD~v~~~~~l 119 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDFEEKYDMVVSALSI 119 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCCCSCEEEEEEESCG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCCCCCceEEEEeCcc
Confidence 35789999999999999999998 7899999999999999999986554 799999999998766899999999877
Q ss_pred CCCc
Q psy15742 266 GGPE 269 (342)
Q Consensus 266 ~~~~ 269 (342)
+...
T Consensus 120 ~~~~ 123 (234)
T 3dtn_A 120 HHLE 123 (234)
T ss_dssp GGSC
T ss_pred ccCC
Confidence 6653
No 147
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.19 E-value=1e-10 Score=109.35 Aligned_cols=78 Identities=23% Similarity=0.240 Sum_probs=68.9
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcC-C
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVC-QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSP-P 264 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~-~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nP-P 264 (342)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+ +++.|+++++.+|+.++++++++|+.++. +..+||+|++++ +
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 141 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMG 141 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCB
T ss_pred cCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCch
Confidence 457899999999999999999885 5999999996 99999999999999779999999999875 346899999998 4
Q ss_pred CC
Q psy15742 265 WG 266 (342)
Q Consensus 265 ~~ 266 (342)
|.
T Consensus 142 ~~ 143 (340)
T 2fyt_A 142 YF 143 (340)
T ss_dssp TT
T ss_pred hh
Confidence 43
No 148
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.19 E-value=8.4e-11 Score=114.81 Aligned_cols=76 Identities=18% Similarity=0.251 Sum_probs=68.7
Q ss_pred CCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPW 265 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~ 265 (342)
++.+|||+|||+|.+++.+++. +.+|+|+|+|+ +++.|+++++.+|+.++++++++|+.++....+||+|+++||.
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~fD~Ivs~~~~ 234 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMG 234 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCH
T ss_pred CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccCCCeEEEEEeCch
Confidence 5789999999999999999987 46999999998 9999999999999977999999999986544689999999983
No 149
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.19 E-value=4.5e-11 Score=106.88 Aligned_cols=73 Identities=16% Similarity=0.122 Sum_probs=66.0
Q ss_pred CCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC----CCCccEEEEc
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP----SLQGDVVFLS 262 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~----~~~~D~Ii~n 262 (342)
++.+|||+|||+|..++.+|.. +.+|+|+|+|+.+++.|++|++.+|+. +++++++|+.++.. ..+||+|+++
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhhcccccCCCceEEEEC
Confidence 4789999999999999999986 689999999999999999999999995 69999999998764 3689999995
No 150
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.18 E-value=2.8e-11 Score=107.16 Aligned_cols=80 Identities=25% Similarity=0.341 Sum_probs=70.4
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCCC
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPPW 265 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP~ 265 (342)
++++.+|||+|||+|.++..++..+.+|+|+|+|+.+++.|++++..++++ +++++++|+.+++ ++++||+|+++-..
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~v~~~~~l 97 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESLPFPDDSFDIITCRYAA 97 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBCCSCTTCEEEEEEESCG
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccCCCCCCcEEEEEECCch
Confidence 456889999999999999999998889999999999999999999998884 7999999998875 45689999998554
Q ss_pred CC
Q psy15742 266 GG 267 (342)
Q Consensus 266 ~~ 267 (342)
+.
T Consensus 98 ~~ 99 (239)
T 1xxl_A 98 HH 99 (239)
T ss_dssp GG
T ss_pred hh
Confidence 43
No 151
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.18 E-value=7.6e-11 Score=104.11 Aligned_cols=74 Identities=12% Similarity=0.069 Sum_probs=64.8
Q ss_pred CCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGG 267 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~~ 267 (342)
++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++... +++++++|+.+..++++||+|++.--.+.
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~~~~~~fD~v~~~~~l~~ 115 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKD-----GITYIHSRFEDAQLPRRYDNIVLTHVLEH 115 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGCCCSSCEEEEEEESCGGG
T ss_pred CCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHcCcCCcccEEEEhhHHHh
Confidence 467899999999999999999888999999999999999998642 68999999998876778999999755443
No 152
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.18 E-value=2.4e-11 Score=106.81 Aligned_cols=80 Identities=15% Similarity=0.150 Sum_probs=68.2
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh-C-------CEEEEEeCCHHHHHHHHHHHHHcC-----CCCcEEEEEccccccCCC
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV-C-------QKVISIDIDPAKLRLAQHNASVYG-----VSHKIQFIQGDFFALAPS 253 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~-~-------~~v~gvD~s~~~l~~a~~n~~~~g-----l~~~i~~~~~D~~~~~~~ 253 (342)
++++.+|||+|||+|.++..+++. + .+|+|+|+++.+++.|++|+..++ . ++++++.+|+.+..+.
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~ 160 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDS-GQLLIVEGDGRKGYPP 160 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHH-TSEEEEESCGGGCCGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCC-CceEEEECCcccCCCc
Confidence 456889999999999999999985 4 499999999999999999998776 3 4799999999874433
Q ss_pred -CCccEEEEcCCCCC
Q psy15742 254 -LQGDVVFLSPPWGG 267 (342)
Q Consensus 254 -~~~D~Ii~nPP~~~ 267 (342)
.+||+|+++.+...
T Consensus 161 ~~~fD~I~~~~~~~~ 175 (227)
T 1r18_A 161 NAPYNAIHVGAAAPD 175 (227)
T ss_dssp GCSEEEEEECSCBSS
T ss_pred CCCccEEEECCchHH
Confidence 68999999988654
No 153
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.18 E-value=3.1e-11 Score=100.85 Aligned_cols=133 Identities=14% Similarity=0.118 Sum_probs=87.6
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCC
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWG 266 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~ 266 (342)
.+++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|+++ . ++++++.+| .. .+.++||+|+++..++
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~-~~v~~~~~d-~~-~~~~~~D~v~~~~~l~ 86 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEK-----F-DSVITLSDP-KE-IPDNSVDFILFANSFH 86 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHH-----C-TTSEEESSG-GG-SCTTCEEEEEEESCST
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHh-----C-CCcEEEeCC-CC-CCCCceEEEEEccchh
Confidence 35677999999999999999998866999999999999999998 2 478999999 33 3456899999988877
Q ss_pred CCcccc-ccccccccCcCCCCchh-hhHhhhccCCCceeecCCCCCHHHHHHhhCCCcEEEEecccC
Q psy15742 267 GPEYAR-SSFSIDNIFPEQGGGRR-LFQVARGISPNVGYYLPRTSDVFEIFHDSGKKGSFISLTGRQ 331 (342)
Q Consensus 267 ~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~i~~i~~~~ 331 (342)
...... ....+.+++++ ||.. +.+........ .-.....+...++..++. |+++..+....
T Consensus 87 ~~~~~~~~l~~~~~~L~p--gG~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~-Gf~~~~~~~~~ 149 (170)
T 3i9f_A 87 DMDDKQHVISEVKRILKD--DGRVIIIDWRKENTGI-GPPLSIRMDEKDYMGWFS-NFVVEKRFNPT 149 (170)
T ss_dssp TCSCHHHHHHHHHHHEEE--EEEEEEEEECSSCCSS-SSCGGGCCCHHHHHHHTT-TEEEEEEECSS
T ss_pred cccCHHHHHHHHHHhcCC--CCEEEEEEcCcccccc-CchHhhhcCHHHHHHHHh-CcEEEEccCCC
Confidence 653211 11222333333 2322 22211111100 001122345677888877 99988776654
No 154
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.18 E-value=1.8e-10 Score=102.43 Aligned_cols=73 Identities=30% Similarity=0.447 Sum_probs=66.3
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEc
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLS 262 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~n 262 (342)
+++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++...+. +++++++|+.+.+...+||+|++.
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~fD~v~~~ 112 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIAFKNEFDAVTMF 112 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCCCCSCEEEEEEC
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcccCCCccEEEEc
Confidence 3567999999999999999999999999999999999999999988876 799999999987656789999974
No 155
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.17 E-value=4.2e-11 Score=105.07 Aligned_cols=78 Identities=14% Similarity=0.053 Sum_probs=68.8
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC----C---CCcc
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP----S---LQGD 257 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~----~---~~~D 257 (342)
.++.+|||+|||+|..++.+++. +.+|+++|+|+.+++.|++|++.+|+.++++++++|+.+..+ . .+||
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 45679999999999999999985 679999999999999999999999987789999999976532 1 6899
Q ss_pred EEEEcCCC
Q psy15742 258 VVFLSPPW 265 (342)
Q Consensus 258 ~Ii~nPP~ 265 (342)
+|++|+|.
T Consensus 148 ~v~~d~~~ 155 (229)
T 2avd_A 148 VAVVDADK 155 (229)
T ss_dssp EEEECSCS
T ss_pred EEEECCCH
Confidence 99999983
No 156
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.17 E-value=1.6e-10 Score=102.03 Aligned_cols=82 Identities=20% Similarity=0.233 Sum_probs=71.0
Q ss_pred HHHHHHHhcCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccE
Q psy15742 179 VAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDV 258 (342)
Q Consensus 179 ~~~~i~~~~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~ 258 (342)
..+.+...++++.+|||+|||+|.++..+++. .+++|+|+|+.+++.|++++..++. +++++++|+.+.+...+||+
T Consensus 23 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~fD~ 99 (243)
T 3d2l_A 23 WVAWVLEQVEPGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMETNR--HVDFWVQDMRELELPEPVDA 99 (243)
T ss_dssp HHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHTTC--CCEEEECCGGGCCCSSCEEE
T ss_pred HHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhcCC--ceEEEEcChhhcCCCCCcCE
Confidence 34455556677889999999999999999988 8999999999999999999988774 79999999998765578999
Q ss_pred EEEcC
Q psy15742 259 VFLSP 263 (342)
Q Consensus 259 Ii~nP 263 (342)
|++++
T Consensus 100 v~~~~ 104 (243)
T 3d2l_A 100 ITILC 104 (243)
T ss_dssp EEECT
T ss_pred EEEeC
Confidence 99975
No 157
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.17 E-value=8e-11 Score=103.23 Aligned_cols=81 Identities=15% Similarity=0.101 Sum_probs=69.5
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHhCC-------EEEEEeCCHHHHHHHHHHHHHcCC----CCcEEEEEccccccC----
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAVCQ-------KVISIDIDPAKLRLAQHNASVYGV----SHKIQFIQGDFFALA---- 251 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~~~-------~v~gvD~s~~~l~~a~~n~~~~gl----~~~i~~~~~D~~~~~---- 251 (342)
++++.+|||+|||+|.++..+++... +|+|+|+|+.+++.|++|+..+++ .++++++.+|+.+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 45688999999999999999998753 999999999999999999998873 358999999998753
Q ss_pred -CCCCccEEEEcCCCCC
Q psy15742 252 -PSLQGDVVFLSPPWGG 267 (342)
Q Consensus 252 -~~~~~D~Ii~nPP~~~ 267 (342)
...+||+|+++++...
T Consensus 158 ~~~~~fD~I~~~~~~~~ 174 (227)
T 2pbf_A 158 KELGLFDAIHVGASASE 174 (227)
T ss_dssp HHHCCEEEEEECSBBSS
T ss_pred ccCCCcCEEEECCchHH
Confidence 3458999999988653
No 158
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.17 E-value=1.1e-10 Score=102.39 Aligned_cols=72 Identities=17% Similarity=0.203 Sum_probs=62.4
Q ss_pred hcCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC--C-CCCccEEEEc
Q psy15742 186 RCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA--P-SLQGDVVFLS 262 (342)
Q Consensus 186 ~~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~--~-~~~~D~Ii~n 262 (342)
..+++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++. .+++++++|+.+.. + +++||+|+++
T Consensus 45 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~~~fD~v~~~ 118 (226)
T 3m33_A 45 LLTPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARANA------PHADVYEWNGKGELPAGLGAPFGLIVSR 118 (226)
T ss_dssp HCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHC------TTSEEEECCSCSSCCTTCCCCEEEEEEE
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhC------CCceEEEcchhhccCCcCCCCEEEEEeC
Confidence 3567889999999999999999999899999999999999999982 37899999996533 2 5689999998
Q ss_pred C
Q psy15742 263 P 263 (342)
Q Consensus 263 P 263 (342)
+
T Consensus 119 ~ 119 (226)
T 3m33_A 119 R 119 (226)
T ss_dssp S
T ss_pred C
Confidence 4
No 159
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.17 E-value=8.1e-11 Score=102.06 Aligned_cols=76 Identities=21% Similarity=0.267 Sum_probs=66.9
Q ss_pred CCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC--CCCccEEEEcC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP--SLQGDVVFLSP 263 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~--~~~~D~Ii~nP 263 (342)
++.+|||+|||+|..++.+++. +.+|+++|+|+.+++.|++|++..++.++++++++|+.+..+ .+ ||+|++|.
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 4679999999999999999987 679999999999999999999999987689999999987532 34 99999996
Q ss_pred CC
Q psy15742 264 PW 265 (342)
Q Consensus 264 P~ 265 (342)
+.
T Consensus 135 ~~ 136 (210)
T 3c3p_A 135 DV 136 (210)
T ss_dssp TT
T ss_pred Ch
Confidence 63
No 160
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.17 E-value=1e-10 Score=103.73 Aligned_cols=76 Identities=22% Similarity=0.184 Sum_probs=68.1
Q ss_pred CCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC--------CCCcc
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP--------SLQGD 257 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~--------~~~~D 257 (342)
++.+|||+|||+|..++.+++. +.+++++|+|+.+++.|++|++..|+.++++++.+|+.+..+ .++||
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 149 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYD 149 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcC
Confidence 4679999999999999999986 689999999999999999999999997789999999987532 46899
Q ss_pred EEEEcCC
Q psy15742 258 VVFLSPP 264 (342)
Q Consensus 258 ~Ii~nPP 264 (342)
+|++|.+
T Consensus 150 ~I~~d~~ 156 (237)
T 3c3y_A 150 FGFVDAD 156 (237)
T ss_dssp EEEECSC
T ss_pred EEEECCc
Confidence 9999976
No 161
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.17 E-value=7.4e-11 Score=102.45 Aligned_cols=77 Identities=17% Similarity=0.245 Sum_probs=68.5
Q ss_pred CCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCCCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGGP 268 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~~~ 268 (342)
++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++...+ +++++++|+.+..+.++||+|+++..++..
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 127 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRWS---HISWAATDILQFSTAELFDLIVVAEVLYYL 127 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTCS---SEEEEECCTTTCCCSCCEEEEEEESCGGGS
T ss_pred CCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccCC---CeEEEEcchhhCCCCCCccEEEEccHHHhC
Confidence 46799999999999999999988899999999999999999987543 799999999998877899999998766544
No 162
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.17 E-value=1.6e-10 Score=101.46 Aligned_cols=78 Identities=23% Similarity=0.171 Sum_probs=68.4
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPPWG 266 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP~~ 266 (342)
.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++..++ +++++++|+.+.. ..++||+|+++.++.
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~~~~~~fD~v~~~~~~~ 145 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGYEEEKPYDRVVVWATAP 145 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCCGGGCCEEEEEESSBBS
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCcccccccCCCccEEEECCcHH
Confidence 457899999999999999999988999999999999999999998765 7999999998743 356899999998876
Q ss_pred CC
Q psy15742 267 GP 268 (342)
Q Consensus 267 ~~ 268 (342)
..
T Consensus 146 ~~ 147 (231)
T 1vbf_A 146 TL 147 (231)
T ss_dssp SC
T ss_pred HH
Confidence 43
No 163
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.16 E-value=4.8e-11 Score=105.85 Aligned_cols=74 Identities=11% Similarity=0.107 Sum_probs=65.9
Q ss_pred CCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC----CCCccEEEEc
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP----SLQGDVVFLS 262 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~----~~~~D~Ii~n 262 (342)
++.+|||+|||+|..++.++.. +.+|+|+|+|+.+++.|++|++.+|++ +++++++|+.++.. ..+||+|+++
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhcccccccCCccEEEEe
Confidence 4779999999999999999963 789999999999999999999999985 69999999988752 4689999996
Q ss_pred C
Q psy15742 263 P 263 (342)
Q Consensus 263 P 263 (342)
.
T Consensus 149 ~ 149 (240)
T 1xdz_A 149 A 149 (240)
T ss_dssp C
T ss_pred c
Confidence 5
No 164
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.16 E-value=1e-10 Score=112.83 Aligned_cols=84 Identities=25% Similarity=0.316 Sum_probs=73.3
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC---CCCCccEEEE
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAVC--QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA---PSLQGDVVFL 261 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~~--~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~---~~~~~D~Ii~ 261 (342)
..++.+|||+|||+|+.+..++... .+|+|+|+|+.+++.+++|++.+|+ +++++++|+.+.. +...||+|++
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~~~~~~~~~fD~Vl~ 321 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYPSQWCGEQQFDRILL 321 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCTHHHHTTCCEEEEEE
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhchhhcccCCCCEEEE
Confidence 4578899999999999999999873 6999999999999999999999998 5799999998764 3468999999
Q ss_pred cCCCCCCcccc
Q psy15742 262 SPPWGGPEYAR 272 (342)
Q Consensus 262 nPP~~~~~~~~ 272 (342)
|||+.+.....
T Consensus 322 D~Pcsg~g~~~ 332 (429)
T 1sqg_A 322 DAPCSATGVIR 332 (429)
T ss_dssp ECCCCCGGGTT
T ss_pred eCCCCcccccC
Confidence 99999865443
No 165
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.16 E-value=1e-10 Score=103.11 Aligned_cols=79 Identities=22% Similarity=0.328 Sum_probs=70.2
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC----CCCccEEEE
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP----SLQGDVVFL 261 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~----~~~~D~Ii~ 261 (342)
.++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.|++|+..+|+.++++++.+|+.+..+ .++||+|++
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 35779999999999999999987 689999999999999999999999987689999999987532 468999999
Q ss_pred cCCCC
Q psy15742 262 SPPWG 266 (342)
Q Consensus 262 nPP~~ 266 (342)
|+|..
T Consensus 133 ~~~~~ 137 (233)
T 2gpy_A 133 DAAKG 137 (233)
T ss_dssp EGGGS
T ss_pred CCCHH
Confidence 98854
No 166
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.16 E-value=1.2e-10 Score=102.02 Aligned_cols=85 Identities=22% Similarity=0.285 Sum_probs=73.1
Q ss_pred HHhcCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC----CcEEEEEccccccC-CCCCccE
Q psy15742 184 ASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVS----HKIQFIQGDFFALA-PSLQGDV 258 (342)
Q Consensus 184 ~~~~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~----~~i~~~~~D~~~~~-~~~~~D~ 258 (342)
...++++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++...++. ++++++++|+.+.+ +..+||+
T Consensus 25 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 104 (235)
T 3sm3_A 25 HNYLQEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDF 104 (235)
T ss_dssp HHHCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEE
T ss_pred HHhCCCCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeE
Confidence 334567889999999999999999999999999999999999999999887762 36899999998875 4568999
Q ss_pred EEEcCCCCCC
Q psy15742 259 VFLSPPWGGP 268 (342)
Q Consensus 259 Ii~nPP~~~~ 268 (342)
|+++..+...
T Consensus 105 v~~~~~l~~~ 114 (235)
T 3sm3_A 105 AVMQAFLTSV 114 (235)
T ss_dssp EEEESCGGGC
T ss_pred EEEcchhhcC
Confidence 9998776654
No 167
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.16 E-value=6.9e-11 Score=107.52 Aligned_cols=79 Identities=16% Similarity=0.127 Sum_probs=69.7
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPP 264 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP 264 (342)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...+. +++++++|+.+++..++||+|+++..
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~fD~v~~~~~ 98 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIELNDKYDIAICHAF 98 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCCCSSCEEEEEEESC
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcCcCCCeeEEEECCh
Confidence 46789999999999999999987 58999999999999999999987765 89999999998876678999999876
Q ss_pred CCCC
Q psy15742 265 WGGP 268 (342)
Q Consensus 265 ~~~~ 268 (342)
.+..
T Consensus 99 l~~~ 102 (284)
T 3gu3_A 99 LLHM 102 (284)
T ss_dssp GGGC
T ss_pred hhcC
Confidence 5543
No 168
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.15 E-value=1.4e-10 Score=107.92 Aligned_cols=78 Identities=22% Similarity=0.285 Sum_probs=69.3
Q ss_pred CCCeEEeccCCCcHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCCCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVC-QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPPWG 266 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~-~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP~~ 266 (342)
++.+|||+|||+|.++..+++.+ .+|+|+|+| .+++.|+++++.+++.++++++++|+.++. +..+||+|+++++..
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGY 116 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBT
T ss_pred CCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchh
Confidence 57799999999999999999885 599999999 699999999999999878999999999875 336899999998854
Q ss_pred C
Q psy15742 267 G 267 (342)
Q Consensus 267 ~ 267 (342)
.
T Consensus 117 ~ 117 (328)
T 1g6q_1 117 F 117 (328)
T ss_dssp T
T ss_pred h
Confidence 4
No 169
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.15 E-value=3.6e-11 Score=107.46 Aligned_cols=80 Identities=21% Similarity=0.221 Sum_probs=68.4
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCCC
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPPW 265 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP~ 265 (342)
++++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++ ..+ ..+++++++|+.+++ ++++||+|+++-.+
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~-~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKI-AGV-DRKVQVVQADARAIPLPDESVHGVIVVHLW 114 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHT-TTS-CTTEEEEESCTTSCCSCTTCEEEEEEESCG
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-hcc-CCceEEEEcccccCCCCCCCeeEEEECCch
Confidence 456789999999999999999988899999999999999999998 222 358999999998875 45689999998776
Q ss_pred CCC
Q psy15742 266 GGP 268 (342)
Q Consensus 266 ~~~ 268 (342)
+..
T Consensus 115 ~~~ 117 (263)
T 2yqz_A 115 HLV 117 (263)
T ss_dssp GGC
T ss_pred hhc
Confidence 554
No 170
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.14 E-value=1.4e-10 Score=105.01 Aligned_cols=78 Identities=19% Similarity=0.198 Sum_probs=68.9
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHc-C-CCCcEEEEEccccccC-CCCCccEEE
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVY-G-VSHKIQFIQGDFFALA-PSLQGDVVF 260 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~-g-l~~~i~~~~~D~~~~~-~~~~~D~Ii 260 (342)
+.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|++|++.+ | +.++++++++|+.+.. +...||+|+
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~ 176 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAV 176 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEE
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEE
Confidence 456889999999999999999985 689999999999999999999888 5 4468999999998875 456899999
Q ss_pred EcCC
Q psy15742 261 LSPP 264 (342)
Q Consensus 261 ~nPP 264 (342)
+|+|
T Consensus 177 ~~~~ 180 (280)
T 1i9g_A 177 LDML 180 (280)
T ss_dssp EESS
T ss_pred ECCc
Confidence 9987
No 171
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.14 E-value=1.4e-10 Score=102.36 Aligned_cols=78 Identities=18% Similarity=0.154 Sum_probs=69.5
Q ss_pred CCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcC-CCCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSP-PWGG 267 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nP-P~~~ 267 (342)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++++...+. +++++++|+.+.+...+||+|+++. .++.
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~ 114 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNINRKFDLITCCLDSTNY 114 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCCSCCEEEEEECTTGGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCccCCceEEEEcCccccc
Confidence 578999999999999999999989999999999999999999988876 7899999999876557899999987 6554
Q ss_pred C
Q psy15742 268 P 268 (342)
Q Consensus 268 ~ 268 (342)
.
T Consensus 115 ~ 115 (246)
T 1y8c_A 115 I 115 (246)
T ss_dssp C
T ss_pred c
Confidence 3
No 172
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.14 E-value=7e-11 Score=106.67 Aligned_cols=80 Identities=26% Similarity=0.437 Sum_probs=71.3
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPP 264 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP 264 (342)
+++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++..++++ +++++.+|+.+.+ +.++||+|+++..
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIFSLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGCCSCTTCEEEEEEESC
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEcccccCCCCCCCeeEEEEech
Confidence 56889999999999999999987 789999999999999999999999884 7999999999876 4578999999877
Q ss_pred CCCC
Q psy15742 265 WGGP 268 (342)
Q Consensus 265 ~~~~ 268 (342)
+...
T Consensus 115 l~~~ 118 (276)
T 3mgg_A 115 LEHL 118 (276)
T ss_dssp GGGC
T ss_pred hhhc
Confidence 6554
No 173
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.14 E-value=1.1e-10 Score=116.38 Aligned_cols=83 Identities=13% Similarity=0.082 Sum_probs=70.8
Q ss_pred HHhcCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC---CCCCccEEE
Q psy15742 184 ASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA---PSLQGDVVF 260 (342)
Q Consensus 184 ~~~~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~---~~~~~D~Ii 260 (342)
...+..+.+|||+|||+|.++..+|+.|..|+|||.++.+++.|+..+...|.. ++++.++|+.++. +.++||+|+
T Consensus 61 ~~~~~~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~fD~v~ 139 (569)
T 4azs_A 61 SRALGRPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDF-AAEFRVGRIEEVIAALEEGEFDLAI 139 (569)
T ss_dssp HHHHTSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTTS-EEEEEECCHHHHHHHCCTTSCSEEE
T ss_pred HhhcCCCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCC-ceEEEECCHHHHhhhccCCCccEEE
Confidence 334456779999999999999999999999999999999999999999888742 7999999998873 456899999
Q ss_pred EcCCCCC
Q psy15742 261 LSPPWGG 267 (342)
Q Consensus 261 ~nPP~~~ 267 (342)
+--.+.+
T Consensus 140 ~~e~~eh 146 (569)
T 4azs_A 140 GLSVFHH 146 (569)
T ss_dssp EESCHHH
T ss_pred ECcchhc
Confidence 9655544
No 174
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.14 E-value=2.6e-11 Score=107.97 Aligned_cols=76 Identities=18% Similarity=0.140 Sum_probs=68.6
Q ss_pred CCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-------CCCccE
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-------SLQGDV 258 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-------~~~~D~ 258 (342)
++.+|||+|||+|..++.+|+. +.+|+|+|+|+.+++.|++|++.+|+.++++++++|+.+.++ .++||+
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 4679999999999999999984 579999999999999999999999997799999999987643 468999
Q ss_pred EEEcCC
Q psy15742 259 VFLSPP 264 (342)
Q Consensus 259 Ii~nPP 264 (342)
|++|.+
T Consensus 140 V~~d~~ 145 (242)
T 3r3h_A 140 IFIDAD 145 (242)
T ss_dssp EEEESC
T ss_pred EEEcCC
Confidence 999987
No 175
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.13 E-value=1.8e-10 Score=100.28 Aligned_cols=75 Identities=15% Similarity=0.173 Sum_probs=66.4
Q ss_pred CCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCCCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGGP 268 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~~~ 268 (342)
++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|++++. .+++++++|+.+++..++||+|+++..++..
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 119 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEVPTSIDTIVSTYAFHHL 119 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCCCSCCSEEEEESCGGGS
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCCCCCeEEEEECcchhcC
Confidence 47799999999999999999999999999999999999999875 3789999999987654799999998776554
No 176
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.13 E-value=8.1e-11 Score=106.89 Aligned_cols=76 Identities=11% Similarity=0.101 Sum_probs=64.0
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCE----EEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCC-------Cc
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQK----VISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSL-------QG 256 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~----v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~-------~~ 256 (342)
.++.+|||+|||+|.++..+++.+.. |+|+|+|+.+++.++++. .++++++++|+.++.... ..
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~~~~~~~~~~~~~~ 115 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALTFDFGSIARPGDEPS 115 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGCCGGGGSCSSSSCC
T ss_pred CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhcCChhHhcccccCCc
Confidence 45789999999999999999998766 999999999999999993 248999999999875221 24
Q ss_pred cEEEEcCCCCCC
Q psy15742 257 DVVFLSPPWGGP 268 (342)
Q Consensus 257 D~Ii~nPP~~~~ 268 (342)
+.|++||||...
T Consensus 116 ~~vv~NlPY~is 127 (279)
T 3uzu_A 116 LRIIGNLPYNIS 127 (279)
T ss_dssp EEEEEECCHHHH
T ss_pred eEEEEccCcccc
Confidence 579999998754
No 177
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.13 E-value=7e-11 Score=102.41 Aligned_cols=77 Identities=22% Similarity=0.288 Sum_probs=66.8
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCC
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWG 266 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~ 266 (342)
.+++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++ .+. .+++++++|+.+..+.++||+|+++-.++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~~~~~~~D~v~~~~~l~ 118 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDWTPDRQWDAVFFAHWLA 118 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSCCCSSCEEEEEEESCGG
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccCCCCCceeEEEEechhh
Confidence 3457799999999999999999999999999999999999988 454 47999999999887677999999986655
Q ss_pred CC
Q psy15742 267 GP 268 (342)
Q Consensus 267 ~~ 268 (342)
..
T Consensus 119 ~~ 120 (218)
T 3ou2_A 119 HV 120 (218)
T ss_dssp GS
T ss_pred cC
Confidence 44
No 178
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.12 E-value=8.4e-11 Score=105.65 Aligned_cols=78 Identities=9% Similarity=-0.175 Sum_probs=59.4
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEcccc-ccCCCCCccEEEEcCCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFF-ALAPSLQGDVVFLSPPWG 266 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~-~~~~~~~~D~Ii~nPP~~ 266 (342)
+++.+|||+|||+|.+++.+++.+.+|+|+|+|+.|++.|++|+..+.+ +..+...+.. .....++||+|+++..++
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~~v--~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~ 121 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADRCV--TIDLLDITAEIPKELAGHFDFVLNDRLIN 121 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSSCC--EEEECCTTSCCCGGGTTCCSEEEEESCGG
T ss_pred CCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhccc--eeeeeecccccccccCCCccEEEEhhhhH
Confidence 4588999999999999999999999999999999999999999865422 2333332320 011245899999998765
Q ss_pred C
Q psy15742 267 G 267 (342)
Q Consensus 267 ~ 267 (342)
.
T Consensus 122 ~ 122 (261)
T 3iv6_A 122 R 122 (261)
T ss_dssp G
T ss_pred h
Confidence 4
No 179
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.12 E-value=4.7e-10 Score=107.61 Aligned_cols=78 Identities=22% Similarity=0.248 Sum_probs=64.3
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh-C-CEEEEEeCCHHHHHHH-------HHHHHHcCCC-CcEEEEEcccccc----C-C
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV-C-QKVISIDIDPAKLRLA-------QHNASVYGVS-HKIQFIQGDFFAL----A-P 252 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~-~-~~v~gvD~s~~~l~~a-------~~n~~~~gl~-~~i~~~~~D~~~~----~-~ 252 (342)
+++.+|||+|||+|.+++.+|+. + .+|+|+|+|+.+++.| +.|++.+|+. ++++++++|.... . .
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~ 320 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAEL 320 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccccc
Confidence 46889999999999999999986 4 5899999999999999 9999999953 5899999865421 0 1
Q ss_pred CCCccEEEEcCCC
Q psy15742 253 SLQGDVVFLSPPW 265 (342)
Q Consensus 253 ~~~~D~Ii~nPP~ 265 (342)
...||+|+++...
T Consensus 321 ~~~FDvIvvn~~l 333 (433)
T 1u2z_A 321 IPQCDVILVNNFL 333 (433)
T ss_dssp GGGCSEEEECCTT
T ss_pred cCCCCEEEEeCcc
Confidence 3579999998553
No 180
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.11 E-value=9.4e-11 Score=104.41 Aligned_cols=76 Identities=25% Similarity=0.204 Sum_probs=66.2
Q ss_pred CCCeEEeccCCCcHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCCCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVCQ-KVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPPWG 266 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~~-~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP~~ 266 (342)
++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++. ..+++++++|+.+++ +.++||+|+++-.++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 119 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIAIEPDAYNVVLSSLALH 119 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCCCCTTCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCCCCCCCeEEEEEchhhh
Confidence 578999999999999999999866 99999999999999999876 248999999998876 457899999987665
Q ss_pred CC
Q psy15742 267 GP 268 (342)
Q Consensus 267 ~~ 268 (342)
..
T Consensus 120 ~~ 121 (253)
T 3g5l_A 120 YI 121 (253)
T ss_dssp GC
T ss_pred hh
Confidence 44
No 181
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.11 E-value=1.9e-10 Score=105.20 Aligned_cols=74 Identities=20% Similarity=0.253 Sum_probs=65.8
Q ss_pred CCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC--CcEEEEEccccccCCCCCccEEEEc
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVS--HKIQFIQGDFFALAPSLQGDVVFLS 262 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~--~~i~~~~~D~~~~~~~~~~D~Ii~n 262 (342)
++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++...++. .+++++++|+.+++...+||+|++.
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~ 157 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALDKRFGTVVIS 157 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCSCCEEEEEEC
T ss_pred CCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcCCCcCEEEEC
Confidence 3559999999999999999999999999999999999999999877642 4799999999998767799999864
No 182
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.11 E-value=3.8e-10 Score=95.68 Aligned_cols=126 Identities=13% Similarity=0.107 Sum_probs=86.1
Q ss_pred hcCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCC
Q psy15742 186 RCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPP 264 (342)
Q Consensus 186 ~~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP 264 (342)
.++++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|+++.. +++++++|+.+.+ +.++||+|+++|+
T Consensus 43 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~------~~~~~~~d~~~~~~~~~~~D~i~~~~~ 116 (195)
T 3cgg_A 43 MAPRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDFP------EARWVVGDLSVDQISETDFDLIVSAGN 116 (195)
T ss_dssp HSCTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTSCCCCCCEEEEEECCC
T ss_pred hccCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhCC------CCcEEEcccccCCCCCCceeEEEECCc
Confidence 35678899999999999999999988999999999999999999863 5889999998864 4568999999966
Q ss_pred CCCCccccccccccccCcCCCCchhhhHhhhccCCCceeec----CCCCCHHHHHHhh-CCCcEEEEecc
Q psy15742 265 WGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYL----PRTSDVFEIFHDS-GKKGSFISLTG 329 (342)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~l~~~~-~~~~~i~~i~~ 329 (342)
.... .. ..+. ...+..+.+.+.+++.+++ ........+...+ ..|+++..+..
T Consensus 117 ~~~~--~~-~~~~---------~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 174 (195)
T 3cgg_A 117 VMGF--LA-EDGR---------EPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFE 174 (195)
T ss_dssp CGGG--SC-HHHH---------HHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEES
T ss_pred HHhh--cC-hHHH---------HHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeec
Confidence 3221 00 0000 1123334444555554444 2223455555443 34778776643
No 183
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.11 E-value=1.4e-10 Score=106.16 Aligned_cols=78 Identities=12% Similarity=0.066 Sum_probs=63.9
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcC---C-CCcEEEEEccccccCC--CCCccEE
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYG---V-SHKIQFIQGDFFALAP--SLQGDVV 259 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~g---l-~~~i~~~~~D~~~~~~--~~~~D~I 259 (342)
+++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|++++...+ + .++++++.+|+.++.. .++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 45779999999999999999987 5789999999999999999987652 2 2489999999988763 4689999
Q ss_pred EEcCCC
Q psy15742 260 FLSPPW 265 (342)
Q Consensus 260 i~nPP~ 265 (342)
++|+|-
T Consensus 162 i~D~~~ 167 (294)
T 3adn_A 162 ISDCTD 167 (294)
T ss_dssp EECC--
T ss_pred EECCCC
Confidence 999873
No 184
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.10 E-value=3e-10 Score=101.52 Aligned_cols=78 Identities=21% Similarity=0.223 Sum_probs=68.2
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP~ 265 (342)
+++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++... ++++++++|+.+.+ +.++||+|+++..+
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 130 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTKEFPENNFDLIYSRDAI 130 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTCCCCTTCEEEEEEESCG
T ss_pred CCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccCCCCCCcEEEEeHHHHH
Confidence 46789999999999999999997 899999999999999999987654 48999999998875 45789999998776
Q ss_pred CCC
Q psy15742 266 GGP 268 (342)
Q Consensus 266 ~~~ 268 (342)
+..
T Consensus 131 ~~~ 133 (266)
T 3ujc_A 131 LAL 133 (266)
T ss_dssp GGS
T ss_pred Hhc
Confidence 654
No 185
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.10 E-value=1.9e-10 Score=107.25 Aligned_cols=78 Identities=24% Similarity=0.340 Sum_probs=64.9
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh-C--CEEEEEeCCHHHHHHHHHHHHHcC----------CCCcEEEEEccccccC--
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV-C--QKVISIDIDPAKLRLAQHNASVYG----------VSHKIQFIQGDFFALA-- 251 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~-~--~~v~gvD~s~~~l~~a~~n~~~~g----------l~~~i~~~~~D~~~~~-- 251 (342)
+.++.+|||+|||+|.++..+++. + .+|+|+|+++.+++.|++|+...+ ..++++++.+|+.+..
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~ 182 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATED 182 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC--
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccc
Confidence 457889999999999999999986 4 899999999999999999998643 2358999999998863
Q ss_pred -CCCCccEEEEcCC
Q psy15742 252 -PSLQGDVVFLSPP 264 (342)
Q Consensus 252 -~~~~~D~Ii~nPP 264 (342)
+.+.||+|++|+|
T Consensus 183 ~~~~~fD~V~~~~~ 196 (336)
T 2b25_A 183 IKSLTFDAVALDML 196 (336)
T ss_dssp -----EEEEEECSS
T ss_pred cCCCCeeEEEECCC
Confidence 3457999999987
No 186
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.09 E-value=3.5e-10 Score=102.87 Aligned_cols=81 Identities=21% Similarity=0.241 Sum_probs=70.2
Q ss_pred hcCCCCeEEeccCCCcHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC--CCCCccEEEEc
Q psy15742 186 RCKASDVVIDGFCGCGGNTIQFAAVCQ-KVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA--PSLQGDVVFLS 262 (342)
Q Consensus 186 ~~~~~~~vLDlgcGtG~~~~~~a~~~~-~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~--~~~~~D~Ii~n 262 (342)
.++++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++...++..+++++++|+.+.+ +.++||+|+++
T Consensus 61 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 61 YTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ 140 (298)
T ss_dssp HCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred hCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEEC
Confidence 356788999999999999999888754 999999999999999999998887668999999998764 35689999998
Q ss_pred CCCC
Q psy15742 263 PPWG 266 (342)
Q Consensus 263 PP~~ 266 (342)
-..+
T Consensus 141 ~~l~ 144 (298)
T 1ri5_A 141 FSFH 144 (298)
T ss_dssp SCGG
T ss_pred chhh
Confidence 6553
No 187
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.09 E-value=2.2e-10 Score=104.79 Aligned_cols=76 Identities=22% Similarity=0.330 Sum_probs=62.3
Q ss_pred CCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCC-----------------------------
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVS----------------------------- 237 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~----------------------------- 237 (342)
++.+|||+|||+|.+++.+++. +.+|+|+|+|+.+++.|++++...+..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 3789999999999999999997 789999999999999999998765532
Q ss_pred ----------------------------CcEEEEEccccccC------CCCCccEEEEcCC
Q psy15742 238 ----------------------------HKIQFIQGDFFALA------PSLQGDVVFLSPP 264 (342)
Q Consensus 238 ----------------------------~~i~~~~~D~~~~~------~~~~~D~Ii~nPP 264 (342)
++++|+++|+.... ....||+|++.-.
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~v 186 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSL 186 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESC
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChH
Confidence 58999999998654 4568999999655
No 188
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.09 E-value=2e-10 Score=101.71 Aligned_cols=78 Identities=18% Similarity=0.158 Sum_probs=66.1
Q ss_pred CCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-CCCccEEEEcCCCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-SLQGDVVFLSPPWG 266 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-~~~~D~Ii~nPP~~ 266 (342)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...+. .+++++++|+.+++. .++||+|+++-.++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGK-RVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGG-GEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCC-ceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 4789999999999999998887 56999999999999999999987653 478999999988763 44899999985544
Q ss_pred C
Q psy15742 267 G 267 (342)
Q Consensus 267 ~ 267 (342)
.
T Consensus 158 ~ 158 (241)
T 2ex4_A 158 H 158 (241)
T ss_dssp G
T ss_pred h
Confidence 3
No 189
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.09 E-value=1.4e-10 Score=103.60 Aligned_cols=76 Identities=14% Similarity=0.142 Sum_probs=63.5
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCC--CccEEEEcCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSL--QGDVVFLSPP 264 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~--~~D~Ii~nPP 264 (342)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++ . ..+++++++|+.++.... ....|++|||
T Consensus 30 ~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~----~~~v~~i~~D~~~~~~~~~~~~~~vv~NlP 104 (249)
T 3ftd_A 30 EEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G----DERLEVINEDASKFPFCSLGKELKVVGNLP 104 (249)
T ss_dssp CTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C----CTTEEEECSCTTTCCGGGSCSSEEEEEECC
T ss_pred CCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c----CCCeEEEEcchhhCChhHccCCcEEEEECc
Confidence 35789999999999999999998 58999999999999999987 2 248999999999875221 1348999999
Q ss_pred CCCC
Q psy15742 265 WGGP 268 (342)
Q Consensus 265 ~~~~ 268 (342)
|...
T Consensus 105 y~i~ 108 (249)
T 3ftd_A 105 YNVA 108 (249)
T ss_dssp TTTH
T ss_pred hhcc
Confidence 9764
No 190
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.09 E-value=3.6e-10 Score=99.06 Aligned_cols=74 Identities=20% Similarity=0.152 Sum_probs=64.1
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC----CCCCccEEE
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA----PSLQGDVVF 260 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~----~~~~~D~Ii 260 (342)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++|++.+ .+++++++|+.+.. ...+||+|+
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~D~v~ 148 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRALVPKVDVIF 148 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTTTCCCEEEEE
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhcccCCceEEE
Confidence 45789999999999999999976 379999999999999999999765 48999999998732 234799999
Q ss_pred EcCC
Q psy15742 261 LSPP 264 (342)
Q Consensus 261 ~nPP 264 (342)
+|+|
T Consensus 149 ~~~~ 152 (227)
T 1g8a_A 149 EDVA 152 (227)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 9998
No 191
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.09 E-value=3.1e-10 Score=100.97 Aligned_cols=74 Identities=16% Similarity=0.305 Sum_probs=63.5
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHc--------CCCCcEEEEEccccccC----CC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVC--QKVISIDIDPAKLRLAQHNASVY--------GVSHKIQFIQGDFFALA----PS 253 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~--~~v~gvD~s~~~l~~a~~n~~~~--------gl~~~i~~~~~D~~~~~----~~ 253 (342)
+++.+|||+|||+|.+++.+|+.+ .+|+|+|+|+.+++.|++|++.+ ++ .+++++++|+.+.+ +.
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSCGGGTSCT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHHHHHhccc
Confidence 357799999999999999999873 58999999999999999999887 77 48999999998743 35
Q ss_pred CCccEEEEc
Q psy15742 254 LQGDVVFLS 262 (342)
Q Consensus 254 ~~~D~Ii~n 262 (342)
+.+|.|+++
T Consensus 127 ~~~d~v~~~ 135 (246)
T 2vdv_E 127 GQLSKMFFC 135 (246)
T ss_dssp TCEEEEEEE
T ss_pred cccCEEEEE
Confidence 689988765
No 192
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.09 E-value=4e-10 Score=102.22 Aligned_cols=108 Identities=16% Similarity=0.119 Sum_probs=80.3
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHc--CC-CCcEEEEEccccccC--CCCCccEEE
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVY--GV-SHKIQFIQGDFFALA--PSLQGDVVF 260 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~--gl-~~~i~~~~~D~~~~~--~~~~~D~Ii 260 (342)
+.+.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|++|+... ++ .++++++.+|+.++. ...+||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 34679999999999999999987 479999999999999999998652 34 358999999998764 246899999
Q ss_pred EcCCCCCCccccccccccccCcCCCCchhhhHhhhccCCCceeecC
Q psy15742 261 LSPPWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYLP 306 (342)
Q Consensus 261 ~nPP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 306 (342)
+|+|..... . ..+. ....+..+.+.+.+++++++.
T Consensus 154 ~d~~~~~~~-~------~~l~----~~~~~~~~~~~L~pgG~lv~~ 188 (275)
T 1iy9_A 154 VDSTEPVGP-A------VNLF----TKGFYAGIAKALKEDGIFVAQ 188 (275)
T ss_dssp ESCSSCCSC-C------CCCS----TTHHHHHHHHHEEEEEEEEEE
T ss_pred ECCCCCCCc-c------hhhh----HHHHHHHHHHhcCCCcEEEEE
Confidence 999863211 0 0111 112444566677777777763
No 193
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.08 E-value=7.9e-12 Score=111.48 Aligned_cols=77 Identities=19% Similarity=0.261 Sum_probs=66.8
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC--CCCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP--SLQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~--~~~~D~Ii~nPP~ 265 (342)
.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++|+. + .++++++++|+.+.+. ..+| .|++||||
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~--~-~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py 103 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLK--L-NTRVTLIHQDILQFQFPNKQRY-KIVGNIPY 103 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTT--T-CSEEEECCSCCTTTTCCCSSEE-EEEEECCS
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhc--c-CCceEEEECChhhcCcccCCCc-EEEEeCCc
Confidence 357799999999999999999988999999999999999998876 2 2489999999998752 2578 89999999
Q ss_pred CCC
Q psy15742 266 GGP 268 (342)
Q Consensus 266 ~~~ 268 (342)
...
T Consensus 104 ~~~ 106 (245)
T 1yub_A 104 HLS 106 (245)
T ss_dssp SSC
T ss_pred ccc
Confidence 875
No 194
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=99.08 E-value=2.9e-10 Score=112.22 Aligned_cols=94 Identities=20% Similarity=0.324 Sum_probs=77.7
Q ss_pred CCHHHHHHHHHHhcC--CCCeEEeccCCCcHHHHHHHHh---------------CCEEEEEeCCHHHHHHHHHHHHHcCC
Q psy15742 174 VTPEKVAQHIASRCK--ASDVVIDGFCGCGGNTIQFAAV---------------CQKVISIDIDPAKLRLAQHNASVYGV 236 (342)
Q Consensus 174 ~~~e~~~~~i~~~~~--~~~~vLDlgcGtG~~~~~~a~~---------------~~~v~gvD~s~~~l~~a~~n~~~~gl 236 (342)
.||..+++.+...+. ++.+|+|++||||++.+.+.+. ...++|+|+++.+...|+.|+-.+|.
T Consensus 200 yTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~ 279 (530)
T 3ufb_A 200 YTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGL 279 (530)
T ss_dssp CCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTC
T ss_pred CCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCC
Confidence 378888888888764 5779999999999999988653 24699999999999999999999998
Q ss_pred CCcEEEEEccccccC-----CCCCccEEEEcCCCCCC
Q psy15742 237 SHKIQFIQGDFFALA-----PSLQGDVVFLSPPWGGP 268 (342)
Q Consensus 237 ~~~i~~~~~D~~~~~-----~~~~~D~Ii~nPP~~~~ 268 (342)
. ...+.++|.+..+ +..+||+|++||||+..
T Consensus 280 ~-~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~ 315 (530)
T 3ufb_A 280 E-YPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGE 315 (530)
T ss_dssp S-CCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCB
T ss_pred c-cccccccccccCchhhhcccccceEEEecCCCCcc
Confidence 4 4678889987643 22479999999999864
No 195
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.08 E-value=3.2e-10 Score=103.95 Aligned_cols=108 Identities=11% Similarity=0.062 Sum_probs=76.3
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHH--cCC-CCcEEEEEccccccC--CCCCccEEE
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASV--YGV-SHKIQFIQGDFFALA--PSLQGDVVF 260 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~--~gl-~~~i~~~~~D~~~~~--~~~~~D~Ii 260 (342)
+.+.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|++|+.. .++ .++++++.+|+.++. ...+||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 44679999999999999999987 57999999999999999999865 333 358999999998764 245799999
Q ss_pred EcCCCCCCccccccccccccCcCCCCchhhhHhhhccCCCceeec
Q psy15742 261 LSPPWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYL 305 (342)
Q Consensus 261 ~nPP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (342)
+|+|....... ..+. ....+..+.+.+.+++.+++
T Consensus 169 ~d~~~~~~~~~------~~l~----~~~~l~~~~~~LkpgG~lv~ 203 (296)
T 1inl_A 169 IDSTDPTAGQG------GHLF----TEEFYQACYDALKEDGVFSA 203 (296)
T ss_dssp EEC----------------CC----SHHHHHHHHHHEEEEEEEEE
T ss_pred EcCCCcccCch------hhhh----HHHHHHHHHHhcCCCcEEEE
Confidence 99874311100 0000 11244455666777777766
No 196
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.08 E-value=2.5e-10 Score=105.84 Aligned_cols=77 Identities=14% Similarity=0.156 Sum_probs=65.8
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHH--cCC-CCcEEEEEccccccC--CCCCccEEE
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASV--YGV-SHKIQFIQGDFFALA--PSLQGDVVF 260 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~--~gl-~~~i~~~~~D~~~~~--~~~~~D~Ii 260 (342)
+++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|++|+.. +++ .++++++++|+.++. ..++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 45679999999999999999987 57999999999999999999876 333 358999999998764 346899999
Q ss_pred EcCC
Q psy15742 261 LSPP 264 (342)
Q Consensus 261 ~nPP 264 (342)
+|++
T Consensus 195 ~d~~ 198 (321)
T 2pt6_A 195 VDSS 198 (321)
T ss_dssp EECC
T ss_pred ECCc
Confidence 9985
No 197
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.08 E-value=3.5e-10 Score=105.32 Aligned_cols=78 Identities=17% Similarity=0.152 Sum_probs=66.5
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHc--CC-CCcEEEEEccccccC---CCCCccE
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVY--GV-SHKIQFIQGDFFALA---PSLQGDV 258 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~--gl-~~~i~~~~~D~~~~~---~~~~~D~ 258 (342)
.+++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|++|+... ++ .++++++.+|+.+++ +.++||+
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 345789999999999999999987 579999999999999999998753 44 348999999998763 3468999
Q ss_pred EEEcCC
Q psy15742 259 VFLSPP 264 (342)
Q Consensus 259 Ii~nPP 264 (342)
|++|++
T Consensus 198 Ii~d~~ 203 (334)
T 1xj5_A 198 VIVDSS 203 (334)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999987
No 198
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.08 E-value=3.2e-10 Score=103.19 Aligned_cols=79 Identities=19% Similarity=0.202 Sum_probs=66.3
Q ss_pred CCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC---CcEEEEEccccccC----CCCCccEEEE
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVS---HKIQFIQGDFFALA----PSLQGDVVFL 261 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~---~~i~~~~~D~~~~~----~~~~~D~Ii~ 261 (342)
++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++...+.. .++.+..+|+.+.+ +.++||+|++
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~ 136 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVIC 136 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEEE
Confidence 4779999999999999999999889999999999999999988554432 36889999998865 5678999999
Q ss_pred c-CCCCC
Q psy15742 262 S-PPWGG 267 (342)
Q Consensus 262 n-PP~~~ 267 (342)
. ..++.
T Consensus 137 ~g~~l~~ 143 (293)
T 3thr_A 137 LGNSFAH 143 (293)
T ss_dssp CTTCGGG
T ss_pred cChHHhh
Confidence 7 44443
No 199
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.07 E-value=7.3e-10 Score=95.43 Aligned_cols=81 Identities=17% Similarity=0.133 Sum_probs=66.2
Q ss_pred hcCCCCeEEeccCCCcHHHH-HHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcC
Q psy15742 186 RCKASDVVIDGFCGCGGNTI-QFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSP 263 (342)
Q Consensus 186 ~~~~~~~vLDlgcGtG~~~~-~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nP 263 (342)
..+++.+|||+|||+|.++. .++..+.+|+|+|+|+.+++.|++++...+. +++++++|+.+.+ +.++||+|+++.
T Consensus 20 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~ 97 (209)
T 2p8j_A 20 ESNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNF--KLNISKGDIRKLPFKDESMSFVYSYG 97 (209)
T ss_dssp HSSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTC--CCCEEECCTTSCCSCTTCEEEEEECS
T ss_pred ccCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEECchhhCCCCCCceeEEEEcC
Confidence 34567899999999999744 4455688999999999999999999987774 7899999998875 456899999976
Q ss_pred CCCCC
Q psy15742 264 PWGGP 268 (342)
Q Consensus 264 P~~~~ 268 (342)
+....
T Consensus 98 ~l~~~ 102 (209)
T 2p8j_A 98 TIFHM 102 (209)
T ss_dssp CGGGS
T ss_pred hHHhC
Confidence 55443
No 200
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.07 E-value=2.8e-10 Score=100.47 Aligned_cols=76 Identities=21% Similarity=0.228 Sum_probs=66.8
Q ss_pred CCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----C--CCccE
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----S--LQGDV 258 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----~--~~~D~ 258 (342)
++.+|||+|||+|..++.+++. +.+|+++|+|+.+++.|++|++.+|+.++++++.+|+.+..+ + ++||+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 4679999999999999999986 569999999999999999999999987789999999866421 2 68999
Q ss_pred EEEcCC
Q psy15742 259 VFLSPP 264 (342)
Q Consensus 259 Ii~nPP 264 (342)
|++|.+
T Consensus 152 V~~d~~ 157 (232)
T 3cbg_A 152 IFIDAD 157 (232)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 999976
No 201
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.07 E-value=2.1e-10 Score=103.34 Aligned_cols=83 Identities=17% Similarity=0.101 Sum_probs=70.1
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh-C--CEEEEEeCCHH------HHHHHHHHHHHcCCCCcEEEEEcc-cc--ccC-CC
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV-C--QKVISIDIDPA------KLRLAQHNASVYGVSHKIQFIQGD-FF--ALA-PS 253 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~-~--~~v~gvD~s~~------~l~~a~~n~~~~gl~~~i~~~~~D-~~--~~~-~~ 253 (342)
++++.+|||+|||+|.++..+++. + .+|+|+|+|+. +++.|++++...++.++++++++| +. ..+ +.
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 120 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIAD 120 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCC
Confidence 457889999999999999999987 4 89999999997 999999999988886689999998 32 322 45
Q ss_pred CCccEEEEcCCCCCCc
Q psy15742 254 LQGDVVFLSPPWGGPE 269 (342)
Q Consensus 254 ~~~D~Ii~nPP~~~~~ 269 (342)
++||+|+++.+++...
T Consensus 121 ~~fD~v~~~~~l~~~~ 136 (275)
T 3bkx_A 121 QHFDRVVLAHSLWYFA 136 (275)
T ss_dssp CCCSEEEEESCGGGSS
T ss_pred CCEEEEEEccchhhCC
Confidence 6899999998876543
No 202
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.07 E-value=2.6e-10 Score=103.79 Aligned_cols=78 Identities=19% Similarity=0.198 Sum_probs=65.7
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHc--CC--------CCcEEEEEccccccCC-CCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVY--GV--------SHKIQFIQGDFFALAP-SLQ 255 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~--gl--------~~~i~~~~~D~~~~~~-~~~ 255 (342)
+++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|++|+ .. ++ .++++++.+|+.++.+ ..+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 45679999999999999999987 569999999999999999998 43 32 3589999999877542 458
Q ss_pred ccEEEEcCCCC
Q psy15742 256 GDVVFLSPPWG 266 (342)
Q Consensus 256 ~D~Ii~nPP~~ 266 (342)
||+|++|+|..
T Consensus 153 fD~Ii~d~~~~ 163 (281)
T 1mjf_A 153 FDVIIADSTDP 163 (281)
T ss_dssp EEEEEEECCCC
T ss_pred eeEEEECCCCC
Confidence 99999999853
No 203
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.05 E-value=1.7e-10 Score=101.63 Aligned_cols=79 Identities=24% Similarity=0.233 Sum_probs=65.6
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCC-HHHHHHH---HHHHHHcCCCCcEEEEEccccccCC--CCCccEE
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDID-PAKLRLA---QHNASVYGVSHKIQFIQGDFFALAP--SLQGDVV 259 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s-~~~l~~a---~~n~~~~gl~~~i~~~~~D~~~~~~--~~~~D~I 259 (342)
+++.+|||+|||+|.++..+|+. +.+|+|+|+| +.+++.| ++++...+++ ++.++++|+.+++. ...+|.|
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-~v~~~~~d~~~l~~~~~d~v~~i 101 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLS-NVVFVIAAAESLPFELKNIADSI 101 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-SEEEECCBTTBCCGGGTTCEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEcCHHHhhhhccCeEEEE
Confidence 45789999999999999999954 7899999999 6666666 8888888884 79999999998853 2568889
Q ss_pred EEcCCCCC
Q psy15742 260 FLSPPWGG 267 (342)
Q Consensus 260 i~nPP~~~ 267 (342)
.+++|+..
T Consensus 102 ~~~~~~~~ 109 (225)
T 3p2e_A 102 SILFPWGT 109 (225)
T ss_dssp EEESCCHH
T ss_pred EEeCCCcH
Confidence 99998653
No 204
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.05 E-value=1.1e-09 Score=96.76 Aligned_cols=73 Identities=19% Similarity=0.192 Sum_probs=62.2
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC---CCCCccEEEEcC
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA---PSLQGDVVFLSP 263 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~---~~~~~D~Ii~nP 263 (342)
++++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++ ++++.+|+.+.. ++++||+|+++-
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~~~~~fD~i~~~~ 109 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSLPDKYLDGVMISH 109 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTSCTTCBSEEEEES
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhcCCCCeeEEEECC
Confidence 45678999999999999999999888999999999999998876 678899988752 567899999976
Q ss_pred CCCCC
Q psy15742 264 PWGGP 268 (342)
Q Consensus 264 P~~~~ 268 (342)
.++..
T Consensus 110 ~l~~~ 114 (240)
T 3dli_A 110 FVEHL 114 (240)
T ss_dssp CGGGS
T ss_pred chhhC
Confidence 65544
No 205
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.05 E-value=3.7e-10 Score=99.98 Aligned_cols=77 Identities=18% Similarity=0.192 Sum_probs=67.3
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC------------
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP------------ 252 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~------------ 252 (342)
.++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.|++++..+|+.++++++.+|+.+..+
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 35779999999999999999987 679999999999999999999999986679999999876422
Q ss_pred -----C-CCccEEEEcCC
Q psy15742 253 -----S-LQGDVVFLSPP 264 (342)
Q Consensus 253 -----~-~~~D~Ii~nPP 264 (342)
. ++||+|++|..
T Consensus 139 ~~f~~~~~~fD~I~~~~~ 156 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDAD 156 (239)
T ss_dssp TTTCCSTTCEEEEEECSC
T ss_pred ccccCCCCCcCEEEEeCC
Confidence 2 68999999854
No 206
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.05 E-value=4.4e-10 Score=103.42 Aligned_cols=79 Identities=19% Similarity=0.161 Sum_probs=66.2
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHH--cCC-CCcEEEEEccccccC--CCCCccEEE
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASV--YGV-SHKIQFIQGDFFALA--PSLQGDVVF 260 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~--~gl-~~~i~~~~~D~~~~~--~~~~~D~Ii 260 (342)
+++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|++|+.. .++ .++++++.+|+.+++ ...+||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 45679999999999999999987 47999999999999999999875 344 358999999998753 346899999
Q ss_pred EcCCCC
Q psy15742 261 LSPPWG 266 (342)
Q Consensus 261 ~nPP~~ 266 (342)
+|+|..
T Consensus 174 ~d~~~~ 179 (304)
T 2o07_A 174 TDSSDP 179 (304)
T ss_dssp EECC--
T ss_pred ECCCCC
Confidence 999853
No 207
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.05 E-value=4.7e-10 Score=99.35 Aligned_cols=75 Identities=19% Similarity=0.232 Sum_probs=63.4
Q ss_pred CCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHH------cCCCCcEEEEEccccc-c---CCCCCc
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASV------YGVSHKIQFIQGDFFA-L---APSLQG 256 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~------~gl~~~i~~~~~D~~~-~---~~~~~~ 256 (342)
++.+|||+|||+|.+++.+|+. +..|+|+|+|+.+++.|+++++. .++ .+++++++|+.+ + .+.++|
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhCCCcCe
Confidence 4668999999999999999987 57999999999999999998764 355 489999999987 3 246789
Q ss_pred cEEEEcCC
Q psy15742 257 DVVFLSPP 264 (342)
Q Consensus 257 D~Ii~nPP 264 (342)
|.|+++.|
T Consensus 125 D~v~~~~~ 132 (235)
T 3ckk_A 125 TKMFFLFP 132 (235)
T ss_dssp EEEEEESC
T ss_pred eEEEEeCC
Confidence 99998644
No 208
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.04 E-value=7.9e-10 Score=96.18 Aligned_cols=74 Identities=8% Similarity=0.025 Sum_probs=60.6
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEcccccc----CCCCCccEEEE
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVC--QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL----APSLQGDVVFL 261 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~--~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~----~~~~~~D~Ii~ 261 (342)
++|.+|||+|||+|..+..+++.. .+|+|+|+|+.+++.+.++++.. .++.++.+|+.+. +..++||+|++
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 132 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSGIVEKVDLIYQ 132 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTTTCCCEEEEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhcccccceeEEEE
Confidence 468899999999999999999863 79999999999988777766643 3789999998764 22368999999
Q ss_pred cCC
Q psy15742 262 SPP 264 (342)
Q Consensus 262 nPP 264 (342)
|.+
T Consensus 133 ~~~ 135 (210)
T 1nt2_A 133 DIA 135 (210)
T ss_dssp CCC
T ss_pred ecc
Confidence 854
No 209
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.04 E-value=8.9e-10 Score=97.87 Aligned_cols=77 Identities=13% Similarity=0.008 Sum_probs=66.0
Q ss_pred CCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCCCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPPWG 266 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP~~ 266 (342)
++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|++++... .+++++++|+.+.+ +.++||+|++....+
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 169 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETATLPPNTYDLIVIQWTAI 169 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCCCCCCCeEEEEEcchhh
Confidence 5789999999999999999887 668999999999999999998654 47999999998875 456899999977655
Q ss_pred CC
Q psy15742 267 GP 268 (342)
Q Consensus 267 ~~ 268 (342)
..
T Consensus 170 ~~ 171 (254)
T 1xtp_A 170 YL 171 (254)
T ss_dssp GS
T ss_pred hC
Confidence 44
No 210
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.04 E-value=2e-10 Score=102.39 Aligned_cols=75 Identities=19% Similarity=0.209 Sum_probs=66.0
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~ 265 (342)
.++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|+++. .+++++++|+.++++..+||+|+++..+
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~fD~v~~~~~l 105 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL------PNTNFGKADLATWKPAQKADLLYANAVF 105 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS------TTSEEEECCTTTCCCSSCEEEEEEESCG
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------CCcEEEECChhhcCccCCcCEEEEeCch
Confidence 35779999999999999999987 889999999999999999882 3789999999988766789999998876
Q ss_pred CCC
Q psy15742 266 GGP 268 (342)
Q Consensus 266 ~~~ 268 (342)
+..
T Consensus 106 ~~~ 108 (259)
T 2p35_A 106 QWV 108 (259)
T ss_dssp GGS
T ss_pred hhC
Confidence 654
No 211
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=99.03 E-value=1.3e-10 Score=104.14 Aligned_cols=76 Identities=16% Similarity=0.051 Sum_probs=62.7
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCE--EEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCC------CCccEE
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQK--VISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPS------LQGDVV 259 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~--v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~------~~~D~I 259 (342)
.++.+|||+|||+|.++. +++ +.+ |+|+|+|+.+++.+++++..+ ++++++++|+.++... ...|.|
T Consensus 20 ~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~~~~~~~~~~~~~~v 94 (252)
T 1qyr_A 20 QKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFNFGELAEKMGQPLRV 94 (252)
T ss_dssp CTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCCHHHHHHHHTSCEEE
T ss_pred CCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCCHHHhhcccCCceEE
Confidence 467899999999999999 654 567 999999999999999987543 3799999999986411 235799
Q ss_pred EEcCCCCCC
Q psy15742 260 FLSPPWGGP 268 (342)
Q Consensus 260 i~nPP~~~~ 268 (342)
++||||...
T Consensus 95 vsNlPY~i~ 103 (252)
T 1qyr_A 95 FGNLPYNIS 103 (252)
T ss_dssp EEECCTTTH
T ss_pred EECCCCCcc
Confidence 999999864
No 212
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.03 E-value=4.6e-10 Score=103.71 Aligned_cols=107 Identities=18% Similarity=0.125 Sum_probs=77.1
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHc--CC-CCcEEEEEccccccC--CCCCccEEE
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVY--GV-SHKIQFIQGDFFALA--PSLQGDVVF 260 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~--gl-~~~i~~~~~D~~~~~--~~~~~D~Ii 260 (342)
+++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|++++... ++ .++++++.+|+.+++ ...+||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 45679999999999999999987 579999999999999999998754 44 358999999998764 356899999
Q ss_pred EcCCCCCCccccccccccccCcCCCCchhhhHhhhccCCCceeec
Q psy15742 261 LSPPWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYL 305 (342)
Q Consensus 261 ~nPP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (342)
+|++-.... . ..+. ....+..+.+.+.+++++++
T Consensus 187 ~d~~~~~~~-~------~~l~----t~~~l~~~~~~LkpgG~lv~ 220 (314)
T 2b2c_A 187 TDSSDPVGP-A------ESLF----GQSYYELLRDALKEDGILSS 220 (314)
T ss_dssp ECCC------------------------HHHHHHHHEEEEEEEEE
T ss_pred EcCCCCCCc-c------hhhh----HHHHHHHHHhhcCCCeEEEE
Confidence 999632110 0 0111 01144455666777777766
No 213
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.03 E-value=9.4e-10 Score=96.71 Aligned_cols=75 Identities=17% Similarity=0.246 Sum_probs=63.7
Q ss_pred HHHHHhcCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEE
Q psy15742 181 QHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVF 260 (342)
Q Consensus 181 ~~i~~~~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii 260 (342)
+.+....+++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.|+++. .+++++++|+.+.+...+||+|+
T Consensus 32 ~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~D~v~ 105 (239)
T 3bxo_A 32 DLVRSRTPEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL------PDATLHQGDMRDFRLGRKFSAVV 105 (239)
T ss_dssp HHHHHHCTTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCCCSSCEEEEE
T ss_pred HHHHHhcCCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHcccCCCCcEEE
Confidence 333444456789999999999999999998779999999999999999875 26899999998876666899999
Q ss_pred E
Q psy15742 261 L 261 (342)
Q Consensus 261 ~ 261 (342)
+
T Consensus 106 ~ 106 (239)
T 3bxo_A 106 S 106 (239)
T ss_dssp E
T ss_pred E
Confidence 5
No 214
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=99.02 E-value=3.5e-10 Score=114.38 Aligned_cols=80 Identities=19% Similarity=0.218 Sum_probs=62.7
Q ss_pred CCCeEEeccCCCcHHHHHHHHhC-----CEEEEEeCCHHHHHHH--HHHHHHcCCC---CcEEEEEccccccC--CCCCc
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVC-----QKVISIDIDPAKLRLA--QHNASVYGVS---HKIQFIQGDFFALA--PSLQG 256 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~-----~~v~gvD~s~~~l~~a--~~n~~~~gl~---~~i~~~~~D~~~~~--~~~~~ 256 (342)
++.+|+|+|||+|++++.+++.. .+++|+|+++.+++.| +.|+..+++. +...+...|+.... ...+|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 47799999999999999998863 4799999999999999 8887663331 23456677776632 34589
Q ss_pred cEEEEcCCCCCC
Q psy15742 257 DVVFLSPPWGGP 268 (342)
Q Consensus 257 D~Ii~nPP~~~~ 268 (342)
|+|++||||+..
T Consensus 401 DVVIgNPPYg~~ 412 (878)
T 3s1s_A 401 SVVVMNPPYVSG 412 (878)
T ss_dssp EEEEECCBCCSS
T ss_pred CEEEECCCcccc
Confidence 999999999763
No 215
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.02 E-value=5.3e-10 Score=99.17 Aligned_cols=85 Identities=14% Similarity=0.139 Sum_probs=72.7
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCC
Q psy15742 178 KVAQHIASRCKASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQ 255 (342)
Q Consensus 178 ~~~~~i~~~~~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~ 255 (342)
.+-..+...+.+..+|||+|||+|-+++.++.. ...++++|+|+.+++.++.|+..+|+ +.++...|.....+...
T Consensus 121 ~fY~~i~~~i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~--~~~~~v~D~~~~~p~~~ 198 (281)
T 3lcv_B 121 EFYRELFRHLPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV--PHRTNVADLLEDRLDEP 198 (281)
T ss_dssp HHHHHHGGGSCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC--CEEEEECCTTTSCCCSC
T ss_pred HHHHHHHhccCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeeecccCCCCC
Confidence 333445555666789999999999999999876 67999999999999999999999998 58999999998888889
Q ss_pred ccEEEEcCC
Q psy15742 256 GDVVFLSPP 264 (342)
Q Consensus 256 ~D~Ii~nPP 264 (342)
||+++++--
T Consensus 199 ~DvaL~lkt 207 (281)
T 3lcv_B 199 ADVTLLLKT 207 (281)
T ss_dssp CSEEEETTC
T ss_pred cchHHHHHH
Confidence 999999533
No 216
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.02 E-value=2e-10 Score=99.97 Aligned_cols=71 Identities=15% Similarity=0.085 Sum_probs=61.8
Q ss_pred CCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEcccccc-----CCCCCccEEEEcC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL-----APSLQGDVVFLSP 263 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~-----~~~~~~D~Ii~nP 263 (342)
++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++ .++.++.+|+.+. .+..+||+|+++.
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~ 124 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVPVGKDYDLICANF 124 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSCCCCCEEEEEEES
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhcccccccCCCccEEEECc
Confidence 367999999999999999999989999999999999999987 2567889988876 2444699999998
Q ss_pred CCC
Q psy15742 264 PWG 266 (342)
Q Consensus 264 P~~ 266 (342)
.++
T Consensus 125 ~l~ 127 (227)
T 3e8s_A 125 ALL 127 (227)
T ss_dssp CCC
T ss_pred hhh
Confidence 877
No 217
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.02 E-value=1.2e-09 Score=95.89 Aligned_cols=72 Identities=18% Similarity=0.176 Sum_probs=65.9
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEc
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLS 262 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~n 262 (342)
.++.+|||+|||+|-+++.++ .+..++|+|+|+.+++.++.++..+|. +..+..+|....++.++||+|+++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~g~--~~~~~v~D~~~~~~~~~~DvvLll 175 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREKDW--DFTFALQDVLCAPPAEAGDLALIF 175 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHTTC--EEEEEECCTTTSCCCCBCSEEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeecccCCCCCCcchHHHH
Confidence 457799999999999999988 778999999999999999999999986 789999999988877799999985
No 218
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.02 E-value=7.6e-10 Score=101.81 Aligned_cols=107 Identities=19% Similarity=0.131 Sum_probs=76.3
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHH---cCCCCcEEEEEccccccC---CCCCccEE
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASV---YGVSHKIQFIQGDFFALA---PSLQGDVV 259 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~---~gl~~~i~~~~~D~~~~~---~~~~~D~I 259 (342)
+++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|++++.. ....++++++.+|+.+++ ...+||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 45789999999999999999986 57999999999999999998843 112358999999998875 35689999
Q ss_pred EEcCCCCCCccccccccccccCcCCCCchhhhHhhhccCCCceeec
Q psy15742 260 FLSPPWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYL 305 (342)
Q Consensus 260 i~nPP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (342)
++|+|..... . ..+. ....+..+.+.+.+++.+++
T Consensus 174 i~d~~~~~~~-~------~~l~----~~~~l~~~~~~LkpgG~lv~ 208 (304)
T 3bwc_A 174 IIDTTDPAGP-A------SKLF----GEAFYKDVLRILKPDGICCN 208 (304)
T ss_dssp EEECC----------------C----CHHHHHHHHHHEEEEEEEEE
T ss_pred EECCCCcccc-c------hhhh----HHHHHHHHHHhcCCCcEEEE
Confidence 9998853211 0 0000 01234455666677666665
No 219
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.02 E-value=2.8e-10 Score=102.10 Aligned_cols=74 Identities=19% Similarity=0.136 Sum_probs=64.0
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPPWG 266 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP~~ 266 (342)
.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+.+. +++++++|+.+++ ++++||+|++....+
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 105 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENLALPDKSVDGVISILAIH 105 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSCCSCTTCBSEEEEESCGG
T ss_pred CCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhCCCCCCCEeEEEEcchHh
Confidence 45789999999999999999998899999999999998877654 7899999998876 457899999987665
Q ss_pred CC
Q psy15742 267 GP 268 (342)
Q Consensus 267 ~~ 268 (342)
..
T Consensus 106 ~~ 107 (261)
T 3ege_A 106 HF 107 (261)
T ss_dssp GC
T ss_pred hc
Confidence 43
No 220
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.01 E-value=6.2e-10 Score=100.73 Aligned_cols=75 Identities=20% Similarity=0.205 Sum_probs=65.9
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGG 267 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~~ 267 (342)
.++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++. .+++++.+|+.+++..++||+|+++..++.
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~ 129 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY------PHLHFDVADARNFRVDKPLDAVFSNAMLHW 129 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCCCSSCEEEEEEESCGGG
T ss_pred CCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCCcCCCcCEEEEcchhhh
Confidence 35789999999999999999998899999999999999999875 368899999998776678999999877655
Q ss_pred C
Q psy15742 268 P 268 (342)
Q Consensus 268 ~ 268 (342)
.
T Consensus 130 ~ 130 (279)
T 3ccf_A 130 V 130 (279)
T ss_dssp C
T ss_pred C
Confidence 3
No 221
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.01 E-value=9.2e-10 Score=95.12 Aligned_cols=74 Identities=16% Similarity=0.104 Sum_probs=62.9
Q ss_pred hcCCCCeEEeccCCCcHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcC
Q psy15742 186 RCKASDVVIDGFCGCGGNTIQFAAVCQ-KVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSP 263 (342)
Q Consensus 186 ~~~~~~~vLDlgcGtG~~~~~~a~~~~-~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nP 263 (342)
...++.+|||+|||+|.++..+ +. +++|+|+|+.+++.|+++. .+++++++|+.+.+ ++++||+|+++.
T Consensus 33 ~~~~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~ 103 (211)
T 2gs9_A 33 LLPPGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEALPFPGESFDVVLLFT 103 (211)
T ss_dssp TCCCCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSCCSCSSCEEEEEEES
T ss_pred hcCCCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccCCCCCCcEEEEEEcC
Confidence 3446889999999999999887 56 9999999999999999987 36889999998875 456899999987
Q ss_pred CCCCC
Q psy15742 264 PWGGP 268 (342)
Q Consensus 264 P~~~~ 268 (342)
..+..
T Consensus 104 ~l~~~ 108 (211)
T 2gs9_A 104 TLEFV 108 (211)
T ss_dssp CTTTC
T ss_pred hhhhc
Confidence 77655
No 222
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.01 E-value=9.9e-10 Score=96.81 Aligned_cols=76 Identities=18% Similarity=0.124 Sum_probs=65.5
Q ss_pred CCCeEEeccCCCcHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCCCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVCQ-KVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPPWG 266 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~~-~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP~~ 266 (342)
++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++... .+++++++|+.+.+ +..+||+|+++..++
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 118 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHLPQDSFDLAYSSLALH 118 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCCCTTCEEEEEEESCGG
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccCCCCCceEEEEecccc
Confidence 477999999999999999998877 999999999999999988643 36899999998875 456899999987765
Q ss_pred CC
Q psy15742 267 GP 268 (342)
Q Consensus 267 ~~ 268 (342)
..
T Consensus 119 ~~ 120 (243)
T 3bkw_A 119 YV 120 (243)
T ss_dssp GC
T ss_pred cc
Confidence 54
No 223
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.01 E-value=9.4e-10 Score=97.40 Aligned_cols=79 Identities=16% Similarity=0.261 Sum_probs=66.5
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCC------CCccEEE
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPS------LQGDVVF 260 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~------~~~D~Ii 260 (342)
++++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|++++. . .+++++++|+.+.... ..||+|+
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~---~-~~~~~~~~d~~~~~~~~~~~~~~~~d~v~ 129 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENT---A-ANISYRLLDGLVPEQAAQIHSEIGDANIY 129 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSC---C-TTEEEEECCTTCHHHHHHHHHHHCSCEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCc---c-cCceEEECcccccccccccccccCccEEE
Confidence 4567899999999999999999998899999999999999999872 1 3799999999886421 2489999
Q ss_pred EcCCCCCCc
Q psy15742 261 LSPPWGGPE 269 (342)
Q Consensus 261 ~nPP~~~~~ 269 (342)
++..++...
T Consensus 130 ~~~~~~~~~ 138 (245)
T 3ggd_A 130 MRTGFHHIP 138 (245)
T ss_dssp EESSSTTSC
T ss_pred EcchhhcCC
Confidence 998777664
No 224
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.01 E-value=3.6e-10 Score=107.36 Aligned_cols=81 Identities=23% Similarity=0.313 Sum_probs=68.4
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHc-----C-CC-CcEEEEEcccccc------C
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVY-----G-VS-HKIQFIQGDFFAL------A 251 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~-----g-l~-~~i~~~~~D~~~~------~ 251 (342)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++|++.+ | .. .+++++++|+.++ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 45789999999999999999885 569999999999999999998766 4 32 4899999999885 3
Q ss_pred -CCCCccEEEEcCCCCCC
Q psy15742 252 -PSLQGDVVFLSPPWGGP 268 (342)
Q Consensus 252 -~~~~~D~Ii~nPP~~~~ 268 (342)
++++||+|+++..++..
T Consensus 162 ~~~~~fD~V~~~~~l~~~ 179 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLS 179 (383)
T ss_dssp CCTTCEEEEEEESCGGGC
T ss_pred CCCCCEEEEEEccchhcC
Confidence 45689999999876654
No 225
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.00 E-value=1.3e-09 Score=100.62 Aligned_cols=79 Identities=18% Similarity=0.142 Sum_probs=66.9
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHH--cC-C-CCcEEEEEccccccC--CCCCccEE
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASV--YG-V-SHKIQFIQGDFFALA--PSLQGDVV 259 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~--~g-l-~~~i~~~~~D~~~~~--~~~~~D~I 259 (342)
+++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|++++.. .+ + .++++++.+|+.++. ..++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 45679999999999999999987 57999999999999999999865 22 2 358999999998864 35689999
Q ss_pred EEcCCCC
Q psy15742 260 FLSPPWG 266 (342)
Q Consensus 260 i~nPP~~ 266 (342)
++|+|..
T Consensus 156 i~d~~~~ 162 (314)
T 1uir_A 156 IIDLTDP 162 (314)
T ss_dssp EEECCCC
T ss_pred EECCCCc
Confidence 9998854
No 226
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.98 E-value=1.9e-09 Score=99.25 Aligned_cols=82 Identities=20% Similarity=0.201 Sum_probs=65.7
Q ss_pred hcCCCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcC------CCCcEEEEEccccccC-------
Q psy15742 186 RCKASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYG------VSHKIQFIQGDFFALA------- 251 (342)
Q Consensus 186 ~~~~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~g------l~~~i~~~~~D~~~~~------- 251 (342)
..+++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|+++....+ ...+++++++|+.+.+
T Consensus 31 ~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 110 (313)
T 3bgv_A 31 KKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRD 110 (313)
T ss_dssp TC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSS
T ss_pred ccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhccc
Confidence 3346789999999999999999876 6799999999999999999987652 1237999999998864
Q ss_pred CCCCccEEEEcCCCCC
Q psy15742 252 PSLQGDVVFLSPPWGG 267 (342)
Q Consensus 252 ~~~~~D~Ii~nPP~~~ 267 (342)
+.++||+|+++-..+.
T Consensus 111 ~~~~fD~V~~~~~l~~ 126 (313)
T 3bgv_A 111 PQMCFDICSCQFVCHY 126 (313)
T ss_dssp TTCCEEEEEEETCGGG
T ss_pred CCCCEEEEEEecchhh
Confidence 2348999999766543
No 227
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.97 E-value=1.7e-09 Score=109.61 Aligned_cols=91 Identities=16% Similarity=0.174 Sum_probs=73.4
Q ss_pred HHHHHHHHHhcC--CCCeEEeccCCCcHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHHc------CCCCcEEEEEc
Q psy15742 177 EKVAQHIASRCK--ASDVVIDGFCGCGGNTIQFAAVC---QKVISIDIDPAKLRLAQHNASVY------GVSHKIQFIQG 245 (342)
Q Consensus 177 e~~~~~i~~~~~--~~~~vLDlgcGtG~~~~~~a~~~---~~v~gvD~s~~~l~~a~~n~~~~------gl~~~i~~~~~ 245 (342)
+..++.+...+. ++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++... ++ .+++++++
T Consensus 707 eqRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqG 785 (950)
T 3htx_A 707 KQRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDG 785 (950)
T ss_dssp HHHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEES
T ss_pred HHHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEEC
Confidence 344555555443 68899999999999999999986 79999999999999999977542 55 48999999
Q ss_pred cccccC-CCCCccEEEEcCCCCCC
Q psy15742 246 DFFALA-PSLQGDVVFLSPPWGGP 268 (342)
Q Consensus 246 D~~~~~-~~~~~D~Ii~nPP~~~~ 268 (342)
|+.+++ ..+.||+|++.-.++..
T Consensus 786 Da~dLp~~d~sFDlVV~~eVLeHL 809 (950)
T 3htx_A 786 SILEFDSRLHDVDIGTCLEVIEHM 809 (950)
T ss_dssp CTTSCCTTSCSCCEEEEESCGGGS
T ss_pred chHhCCcccCCeeEEEEeCchhhC
Confidence 999876 34689999997666554
No 228
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.95 E-value=3.4e-09 Score=94.85 Aligned_cols=75 Identities=17% Similarity=0.135 Sum_probs=62.5
Q ss_pred HHHhcCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEE
Q psy15742 183 IASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFL 261 (342)
Q Consensus 183 i~~~~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~ 261 (342)
+...++++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++.. .+ ++++|+.+++ ++++||+|++
T Consensus 48 l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~-----~~--~~~~d~~~~~~~~~~fD~v~~ 120 (260)
T 2avn_A 48 LEEYLKNPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGV-----KN--VVEAKAEDLPFPSGAFEAVLA 120 (260)
T ss_dssp HHHHCCSCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTC-----SC--EEECCTTSCCSCTTCEEEEEE
T ss_pred HHHhcCCCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcC-----CC--EEECcHHHCCCCCCCEEEEEE
Confidence 33444567899999999999999999988899999999999999998864 12 8899998775 4568999999
Q ss_pred cCC
Q psy15742 262 SPP 264 (342)
Q Consensus 262 nPP 264 (342)
..+
T Consensus 121 ~~~ 123 (260)
T 2avn_A 121 LGD 123 (260)
T ss_dssp CSS
T ss_pred cch
Confidence 654
No 229
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.95 E-value=7.9e-10 Score=103.07 Aligned_cols=77 Identities=14% Similarity=0.045 Sum_probs=65.0
Q ss_pred CCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcC---CC----CcEEEEEccccccCC-----CCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYG---VS----HKIQFIQGDFFALAP-----SLQ 255 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~g---l~----~~i~~~~~D~~~~~~-----~~~ 255 (342)
++.+||++|||+|+++.++++. ..+|++||+|+.+++.|++|+...+ ++ ++++++.+|+.+++. ..+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 4679999999999999999887 5789999999999999999986321 22 269999999998863 468
Q ss_pred ccEEEEcCCC
Q psy15742 256 GDVVFLSPPW 265 (342)
Q Consensus 256 ~D~Ii~nPP~ 265 (342)
||+||+|||.
T Consensus 268 fDvII~D~~d 277 (364)
T 2qfm_A 268 FDYVINDLTA 277 (364)
T ss_dssp EEEEEEECCS
T ss_pred ceEEEECCCC
Confidence 9999999975
No 230
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.93 E-value=2.6e-09 Score=95.99 Aligned_cols=82 Identities=17% Similarity=0.247 Sum_probs=66.9
Q ss_pred HHHHHHHHHhc-CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-C
Q psy15742 177 EKVAQHIASRC-KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-P 252 (342)
Q Consensus 177 e~~~~~i~~~~-~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~ 252 (342)
+.+.+.+...+ .++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++. .++.++.+|+.+.+ +
T Consensus 72 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~ 145 (269)
T 1p91_A 72 DAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRLPFS 145 (269)
T ss_dssp HHHHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSCSBC
T ss_pred HHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhCCCC
Confidence 44445555554 56889999999999999999987 789999999999999998875 26789999998765 4
Q ss_pred CCCccEEEEcCC
Q psy15742 253 SLQGDVVFLSPP 264 (342)
Q Consensus 253 ~~~~D~Ii~nPP 264 (342)
+++||+|+++.+
T Consensus 146 ~~~fD~v~~~~~ 157 (269)
T 1p91_A 146 DTSMDAIIRIYA 157 (269)
T ss_dssp TTCEEEEEEESC
T ss_pred CCceeEEEEeCC
Confidence 568999998644
No 231
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.92 E-value=6.6e-09 Score=91.62 Aligned_cols=76 Identities=13% Similarity=0.044 Sum_probs=61.1
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC----CCCCccEE
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA----PSLQGDVV 259 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~----~~~~~D~I 259 (342)
+++|.+|||+|||+|+++..+|+. ..+|+|+|+|+.+++...+.++.. .++.++++|+.... ...+||+|
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~~~~~~~~D~I 150 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSYKSVVENVDVL 150 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGTTTTCCCEEEE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhhhccccceEEE
Confidence 457899999999999999999985 459999999999986665555443 37999999997642 13589999
Q ss_pred EEcCCC
Q psy15742 260 FLSPPW 265 (342)
Q Consensus 260 i~nPP~ 265 (342)
++|-|.
T Consensus 151 ~~d~a~ 156 (232)
T 3id6_C 151 YVDIAQ 156 (232)
T ss_dssp EECCCC
T ss_pred EecCCC
Confidence 999774
No 232
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.92 E-value=2.5e-09 Score=98.37 Aligned_cols=74 Identities=15% Similarity=0.072 Sum_probs=63.6
Q ss_pred CeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC---CCCCccEEEEcCCC
Q psy15742 191 DVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA---PSLQGDVVFLSPPW 265 (342)
Q Consensus 191 ~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~---~~~~~D~Ii~nPP~ 265 (342)
.+|||+|||+|.++..+++. +.+|++||+|+.+++.|++++.... .++++++.+|+.++. +..+||+|++|.+.
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 39999999999999999983 6799999999999999999986543 258999999998875 34689999999753
No 233
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.91 E-value=1.8e-09 Score=89.73 Aligned_cols=70 Identities=21% Similarity=0.185 Sum_probs=58.6
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEcccccc---------CCCC
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL---------APSL 254 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~---------~~~~ 254 (342)
.+++.+|||+|||+|.++..+++. +.+++|+|+|+ +++. .+++++++|+.+. .+..
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMKALLERVGDS 87 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHHHHHHHHTTC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhhhhhccCCCC
Confidence 456889999999999999999987 37999999999 6532 3789999999876 3456
Q ss_pred CccEEEEcCCCCCC
Q psy15742 255 QGDVVFLSPPWGGP 268 (342)
Q Consensus 255 ~~D~Ii~nPP~~~~ 268 (342)
+||+|++|+|++..
T Consensus 88 ~~D~i~~~~~~~~~ 101 (180)
T 1ej0_A 88 KVQVVMSDMAPNMS 101 (180)
T ss_dssp CEEEEEECCCCCCC
T ss_pred ceeEEEECCCcccc
Confidence 89999999998754
No 234
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.91 E-value=3.5e-09 Score=97.26 Aligned_cols=75 Identities=11% Similarity=0.039 Sum_probs=57.5
Q ss_pred CCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCC-----cEEEEEccc------ccc---CCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSH-----KIQFIQGDF------FAL---APS 253 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~-----~i~~~~~D~------~~~---~~~ 253 (342)
++.+|||+|||+|..+..++.. +.+|+|+|+|+.|++.|++++...+... ++++.++|+ .++ .+.
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 4789999999999876665555 6799999999999999999987666421 267888887 322 245
Q ss_pred CCccEEEEcC
Q psy15742 254 LQGDVVFLSP 263 (342)
Q Consensus 254 ~~~D~Ii~nP 263 (342)
++||+|+|.-
T Consensus 128 ~~FD~V~~~~ 137 (302)
T 2vdw_A 128 GKFNIIDWQF 137 (302)
T ss_dssp SCEEEEEEES
T ss_pred CCeeEEEECc
Confidence 6899999853
No 235
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.90 E-value=3.2e-09 Score=96.64 Aligned_cols=107 Identities=13% Similarity=0.099 Sum_probs=78.4
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcC--C-CCcEEEEEccccccC--CCCCccEEE
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYG--V-SHKIQFIQGDFFALA--PSLQGDVVF 260 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~g--l-~~~i~~~~~D~~~~~--~~~~~D~Ii 260 (342)
+++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|++++...+ + .++++++.+|+.++. ...+||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 45679999999999999999986 5799999999999999999986542 2 358999999998764 246899999
Q ss_pred EcCCCCCCccccccccccccCcCCCCchhhhHhhhccCCCceeec
Q psy15742 261 LSPPWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYL 305 (342)
Q Consensus 261 ~nPP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (342)
+|++..... . ..+. ....+..+.+.+.+++.+.+
T Consensus 157 ~d~~~~~~~-~------~~l~----~~~~l~~~~~~L~pgG~lv~ 190 (283)
T 2i7c_A 157 VDSSDPIGP-A------ETLF----NQNFYEKIYNALKPNGYCVA 190 (283)
T ss_dssp EECCCTTTG-G------GGGS----SHHHHHHHHHHEEEEEEEEE
T ss_pred EcCCCCCCc-c------hhhh----HHHHHHHHHHhcCCCcEEEE
Confidence 998743210 0 0111 01244455666777777765
No 236
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.89 E-value=1.8e-09 Score=93.95 Aligned_cols=77 Identities=22% Similarity=0.352 Sum_probs=61.6
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHH----HHHHcCCCCcEEEEEccccccCC-CCCccEEE
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQH----NASVYGVSHKIQFIQGDFFALAP-SLQGDVVF 260 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~----n~~~~gl~~~i~~~~~D~~~~~~-~~~~D~Ii 260 (342)
+++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.+.+ +....++ ++++++++|+.+++. ... |.|+
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-~~v~~~~~d~~~l~~~~~~-d~v~ 103 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGL-PNLLYLWATAERLPPLSGV-GELH 103 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCC-TTEEEEECCSTTCCSCCCE-EEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCC-CceEEEecchhhCCCCCCC-CEEE
Confidence 45789999999999999999998 7899999999998886433 3444566 489999999998763 334 8888
Q ss_pred EcCCCC
Q psy15742 261 LSPPWG 266 (342)
Q Consensus 261 ~nPP~~ 266 (342)
+..||.
T Consensus 104 ~~~~~~ 109 (218)
T 3mq2_A 104 VLMPWG 109 (218)
T ss_dssp EESCCH
T ss_pred EEccch
Confidence 777754
No 237
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.85 E-value=1.2e-09 Score=96.75 Aligned_cols=69 Identities=20% Similarity=0.289 Sum_probs=58.0
Q ss_pred CCeEEeccCCCcHHHHHHHHh------CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEcccccc---C--CCCCccE
Q psy15742 190 SDVVIDGFCGCGGNTIQFAAV------CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL---A--PSLQGDV 258 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~~------~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~---~--~~~~~D~ 258 (342)
+.+|||+|||+|..+..+|+. +.+|+|+|+|+.+++.|+ ++.++++++++|+.+. . ...+||+
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~~~v~~~~gD~~~~~~l~~~~~~~fD~ 155 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDMENITLHQGDCSDLTTFEHLREMAHPL 155 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGCTTEEEEECCSSCSGGGGGGSSSCSSE
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccCCceEEEECcchhHHHHHhhccCCCCE
Confidence 579999999999999999986 689999999999998887 1225899999999874 2 2337999
Q ss_pred EEEcCC
Q psy15742 259 VFLSPP 264 (342)
Q Consensus 259 Ii~nPP 264 (342)
|++|..
T Consensus 156 I~~d~~ 161 (236)
T 2bm8_A 156 IFIDNA 161 (236)
T ss_dssp EEEESS
T ss_pred EEECCc
Confidence 999865
No 238
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.85 E-value=1.1e-08 Score=94.88 Aligned_cols=79 Identities=23% Similarity=0.225 Sum_probs=68.2
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~ 265 (342)
.++.+|||+|||+|.++..+++. +.+++++|++ .+++.|++++...++.++++++.+|+.+......||+|++.-..
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~l 242 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVLLPNFL 242 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEEEEESCG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEEEEcchh
Confidence 56789999999999999999987 6799999999 99999999999999877899999999876433459999996554
Q ss_pred CC
Q psy15742 266 GG 267 (342)
Q Consensus 266 ~~ 267 (342)
+.
T Consensus 243 ~~ 244 (335)
T 2r3s_A 243 HH 244 (335)
T ss_dssp GG
T ss_pred cc
Confidence 43
No 239
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.83 E-value=7.6e-09 Score=88.56 Aligned_cols=68 Identities=25% Similarity=0.299 Sum_probs=55.8
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC---------C---CC
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA---------P---SL 254 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~---------~---~~ 254 (342)
++++.+|||+|||+|.++..+++.+.+|+|+|+++.. .. .+++++++|+.+.. . .+
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~-----------~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME-----------EI-AGVRFIRCDIFKETIFDDIDRALREEGIE 90 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC-----------CC-TTCEEEECCTTSSSHHHHHHHHHHHHTCS
T ss_pred CCCCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc-----------cC-CCeEEEEccccCHHHHHHHHHHhhcccCC
Confidence 4578899999999999999999988899999999741 22 37899999998753 1 03
Q ss_pred CccEEEEcCCCC
Q psy15742 255 QGDVVFLSPPWG 266 (342)
Q Consensus 255 ~~D~Ii~nPP~~ 266 (342)
+||+|++|+|..
T Consensus 91 ~~D~Vlsd~~~~ 102 (191)
T 3dou_A 91 KVDDVVSDAMAK 102 (191)
T ss_dssp SEEEEEECCCCC
T ss_pred cceEEecCCCcC
Confidence 899999998754
No 240
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.82 E-value=3.4e-08 Score=93.15 Aligned_cols=79 Identities=16% Similarity=0.204 Sum_probs=68.7
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~ 265 (342)
+++.+|||+|||+|.++..+++. +.+++++|+ +.+++.|++++...++.++++++.+|+.+..+. .||+|++.-..
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~-~~D~v~~~~vl 278 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETIPD-GADVYLIKHVL 278 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCS-SCSEEEEESCG
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCCCC-CceEEEhhhhh
Confidence 45789999999999999999987 679999999 999999999999999878999999999854444 79999997665
Q ss_pred CCC
Q psy15742 266 GGP 268 (342)
Q Consensus 266 ~~~ 268 (342)
+..
T Consensus 279 h~~ 281 (369)
T 3gwz_A 279 HDW 281 (369)
T ss_dssp GGS
T ss_pred ccC
Confidence 543
No 241
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.82 E-value=1.6e-08 Score=95.20 Aligned_cols=79 Identities=24% Similarity=0.259 Sum_probs=68.7
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~ 265 (342)
+++.+|||+|||+|.++..+++. +.+++++|+ +.+++.|++++..+++.++++++.+|+.+..+. .||+|+++..+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~D~v~~~~vl 258 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLPV-TADVVLLSFVL 258 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC-CEEEEEEESCG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCC-CCCEEEEeccc
Confidence 46789999999999999999987 579999999 999999999999999877899999999874443 49999998776
Q ss_pred CCC
Q psy15742 266 GGP 268 (342)
Q Consensus 266 ~~~ 268 (342)
+..
T Consensus 259 ~~~ 261 (374)
T 1qzz_A 259 LNW 261 (374)
T ss_dssp GGS
T ss_pred cCC
Confidence 543
No 242
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.81 E-value=3.5e-09 Score=95.28 Aligned_cols=75 Identities=9% Similarity=-0.165 Sum_probs=63.3
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHc--CC-CCcEEEEEccccccCCCCCccEEEEcCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVY--GV-SHKIQFIQGDFFALAPSLQGDVVFLSPP 264 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~--gl-~~~i~~~~~D~~~~~~~~~~D~Ii~nPP 264 (342)
+.+.+|||+|||+|.++..+++.+.+|+++|+|+.+++.|++++... ++ .++++++.+|+.+++ .+||+|++|.+
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~--~~fD~Ii~d~~ 148 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI--KKYDLIFCLQE 148 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC--CCEEEEEESSC
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH--hhCCEEEECCC
Confidence 34679999999999999998876689999999999999999887431 22 248999999999876 68999999954
No 243
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.81 E-value=2.1e-08 Score=94.42 Aligned_cols=80 Identities=15% Similarity=0.098 Sum_probs=68.3
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEcccccc--CCCCCccEEEEcC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL--APSLQGDVVFLSP 263 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~--~~~~~~D~Ii~nP 263 (342)
.++.+|||+|||+|.++..+++. +.+++++|+ +.+++.|++++...++.++++++.+|+++. +....||+|++.-
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~ 256 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQ 256 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEES
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEec
Confidence 35679999999999999999985 679999999 999999999999888877899999999985 2226899999976
Q ss_pred CCCCC
Q psy15742 264 PWGGP 268 (342)
Q Consensus 264 P~~~~ 268 (342)
-.+..
T Consensus 257 vlh~~ 261 (363)
T 3dp7_A 257 FLDCF 261 (363)
T ss_dssp CSTTS
T ss_pred hhhhC
Confidence 65543
No 244
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.80 E-value=2.8e-09 Score=95.82 Aligned_cols=139 Identities=12% Similarity=-0.008 Sum_probs=84.0
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCC----------------------------CC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVC-QKVISIDIDPAKLRLAQHNASVYGV----------------------------SH 238 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~-~~v~gvD~s~~~l~~a~~n~~~~gl----------------------------~~ 238 (342)
.++.+|||+|||+|.++..++..+ .+|+|+|+|+.|++.|+++++.+.. ..
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 357799999999998888777665 4799999999999999998765421 01
Q ss_pred cEE-EEEccccccC-----CCCCccEEEEcCCCCCC-----ccccccccccccCcCCCCchhhhHhhhccCCCce-----
Q psy15742 239 KIQ-FIQGDFFALA-----PSLQGDVVFLSPPWGGP-----EYARSSFSIDNIFPEQGGGRRLFQVARGISPNVG----- 302 (342)
Q Consensus 239 ~i~-~~~~D~~~~~-----~~~~~D~Ii~nPP~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 302 (342)
++. ++++|+.+.. ...+||+|+++--.+.. ++......+.+++++ ||..++... ......
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKP--GG~li~~~~--~~~~~~~~g~~ 209 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKP--GGHLVTTVT--LRLPSYMVGKR 209 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE--EEEEEEEEE--SSCCEEEETTE
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCC--CcEEEEEEe--ecCccceeCCe
Confidence 243 8999998742 24589999996332211 111223334456655 454433311 111110
Q ss_pred eecCCCCCHHHHHHhh-CCCcEEEEeccc
Q psy15742 303 YYLPRTSDVFEIFHDS-GKKGSFISLTGR 330 (342)
Q Consensus 303 ~~l~~~~~~~~l~~~~-~~~~~i~~i~~~ 330 (342)
.+........++...+ ..|+++..+...
T Consensus 210 ~~~~~~~~~~~l~~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 210 EFSCVALEKGEVEQAVLDAGFDIEQLLHS 238 (263)
T ss_dssp EEECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred EeeccccCHHHHHHHHHHCCCEEEEEeec
Confidence 0111123555555544 467888776543
No 245
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.78 E-value=3e-09 Score=92.60 Aligned_cols=73 Identities=19% Similarity=0.155 Sum_probs=60.6
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC---CCCCccEEEEcCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA---PSLQGDVVFLSPP 264 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~---~~~~~D~Ii~nPP 264 (342)
.++.+|||+|||+|.++..+++.+.+++|+|+|+.+++.++++. .+++.+|+.+.. ++++||+|+++-.
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~~fD~v~~~~~ 102 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEEEQFDCVIFGDV 102 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCTTCEEEEEEESC
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCCCccCEEEECCh
Confidence 35789999999999999999988899999999999999998764 268899987632 3468999999766
Q ss_pred CCCC
Q psy15742 265 WGGP 268 (342)
Q Consensus 265 ~~~~ 268 (342)
++..
T Consensus 103 l~~~ 106 (230)
T 3cc8_A 103 LEHL 106 (230)
T ss_dssp GGGS
T ss_pred hhhc
Confidence 5543
No 246
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.78 E-value=5.9e-09 Score=83.99 Aligned_cols=73 Identities=14% Similarity=0.084 Sum_probs=58.3
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCc-HHHHHHHH-hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCC--
Q psy15742 178 KVAQHIASRCKASDVVIDGFCGCG-GNTIQFAA-VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPS-- 253 (342)
Q Consensus 178 ~~~~~i~~~~~~~~~vLDlgcGtG-~~~~~~a~-~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~-- 253 (342)
.+.+.+.+...++.+|||+|||.| ..+..+++ .+..|+++|+++.+++ +++.|+++...+
T Consensus 24 ~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~----------------~v~dDiF~P~~~~Y 87 (153)
T 2k4m_A 24 DLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG----------------IVRDDITSPRMEIY 87 (153)
T ss_dssp HHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT----------------EECCCSSSCCHHHH
T ss_pred HHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc----------------eEEccCCCCccccc
Confidence 344555555566779999999999 69999998 6999999999997665 889999985432
Q ss_pred CCccEE-EEcCCCC
Q psy15742 254 LQGDVV-FLSPPWG 266 (342)
Q Consensus 254 ~~~D~I-i~nPP~~ 266 (342)
..||+| -.|||..
T Consensus 88 ~~~DLIYsirPP~E 101 (153)
T 2k4m_A 88 RGAALIYSIRPPAE 101 (153)
T ss_dssp TTEEEEEEESCCTT
T ss_pred CCcCEEEEcCCCHH
Confidence 389999 7899943
No 247
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.77 E-value=4e-09 Score=94.13 Aligned_cols=78 Identities=15% Similarity=0.019 Sum_probs=63.0
Q ss_pred CCCeEEeccCCCcHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHHcCC----------------------------CCc
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVCQ-KVISIDIDPAKLRLAQHNASVYGV----------------------------SHK 239 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~~-~v~gvD~s~~~l~~a~~n~~~~gl----------------------------~~~ 239 (342)
++.+|||+|||+|.++..++..+. +|+|+|+|+.+++.|++++...+. ..+
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 135 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRA 135 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhh
Confidence 467999999999999999988876 999999999999999999865431 012
Q ss_pred E-EEEEccccccC--CC---CCccEEEEcCCCC
Q psy15742 240 I-QFIQGDFFALA--PS---LQGDVVFLSPPWG 266 (342)
Q Consensus 240 i-~~~~~D~~~~~--~~---~~~D~Ii~nPP~~ 266 (342)
+ +++++|+.+.. +. ++||+|+++-..+
T Consensus 136 v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~ 168 (265)
T 2i62_A 136 IKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLD 168 (265)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHH
T ss_pred heeEEEeeeccCCCCCccccCCccEEEEhhhhh
Confidence 7 89999998764 34 6899999965433
No 248
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.77 E-value=2.7e-08 Score=92.35 Aligned_cols=77 Identities=22% Similarity=0.204 Sum_probs=66.8
Q ss_pred CCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWG 266 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~ 266 (342)
++.+|||+|||+|.++..+++. +.+++++|+ +.+++.|++++...++.++++++.+|+.+..+. .||+|++.--.+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~-~~D~v~~~~vlh 246 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPA-GAGGYVLSAVLH 246 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC-SCSEEEEESCGG
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCC-CCcEEEEehhhc
Confidence 4679999999999999999986 678999999 999999999999999877999999999854444 899999965554
Q ss_pred C
Q psy15742 267 G 267 (342)
Q Consensus 267 ~ 267 (342)
.
T Consensus 247 ~ 247 (332)
T 3i53_A 247 D 247 (332)
T ss_dssp G
T ss_pred c
Confidence 3
No 249
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.75 E-value=1.5e-08 Score=95.20 Aligned_cols=79 Identities=18% Similarity=0.221 Sum_probs=68.2
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~ 265 (342)
+++.+|||+|||+|.++..+++. +.+++++|+ +.+++.|++++...++.++++++.+|+.+.+.. .+|+|++.-.+
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~D~v~~~~vl 266 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYP-EADAVLFCRIL 266 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCC-CCSEEEEESCG
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCC-CCCEEEEechh
Confidence 46789999999999999999987 679999999 999999999999999877799999999886433 34999997776
Q ss_pred CCC
Q psy15742 266 GGP 268 (342)
Q Consensus 266 ~~~ 268 (342)
+..
T Consensus 267 h~~ 269 (359)
T 1x19_A 267 YSA 269 (359)
T ss_dssp GGS
T ss_pred ccC
Confidence 543
No 250
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.75 E-value=2.6e-08 Score=93.42 Aligned_cols=79 Identities=22% Similarity=0.277 Sum_probs=68.2
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~ 265 (342)
+++.+|||+|||+|.++..+++. ..+++++|+ +.+++.|++|+..+++.++++++.+|+.+..+. .||+|+++..+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~D~v~~~~vl 259 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPR-KADAIILSFVL 259 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSS-CEEEEEEESCG
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCC-CccEEEEcccc
Confidence 46789999999999999999987 578999999 999999999999999877899999999874443 49999998776
Q ss_pred CCC
Q psy15742 266 GGP 268 (342)
Q Consensus 266 ~~~ 268 (342)
+..
T Consensus 260 ~~~ 262 (360)
T 1tw3_A 260 LNW 262 (360)
T ss_dssp GGS
T ss_pred cCC
Confidence 543
No 251
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.73 E-value=5e-08 Score=83.39 Aligned_cols=69 Identities=19% Similarity=0.190 Sum_probs=55.5
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh----CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV----CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA----------- 251 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~----~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~----------- 251 (342)
++++.+|||+|||+|.++..+++. +.+|+|+|+|+.+ .. ++++++++|+.+..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~-~~v~~~~~d~~~~~~~~~~~~~~i~ 87 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI-PNVYFIQGEIGKDNMNNIKNINYID 87 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC-TTCEEEECCTTTTSSCCC-------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC-CCceEEEccccchhhhhhccccccc
Confidence 456889999999999999999986 3789999999831 22 36899999998764
Q ss_pred ---------------CCCCccEEEEcCCCCC
Q psy15742 252 ---------------PSLQGDVVFLSPPWGG 267 (342)
Q Consensus 252 ---------------~~~~~D~Ii~nPP~~~ 267 (342)
+..+||+|++|++++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~ 118 (201)
T 2plw_A 88 NMNNNSVDYKLKEILQDKKIDIILSDAAVPC 118 (201)
T ss_dssp ----CHHHHHHHHHHTTCCEEEEEECCCCCC
T ss_pred cccchhhHHHHHhhcCCCcccEEEeCCCcCC
Confidence 3458999999987543
No 252
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.71 E-value=6.4e-08 Score=87.47 Aligned_cols=72 Identities=22% Similarity=0.209 Sum_probs=55.7
Q ss_pred CCeEEeccCCCcH----HHHHHHHh------CCEEEEEeCCHHHHHHHHHHHHH-----------------------cC-
Q psy15742 190 SDVVIDGFCGCGG----NTIQFAAV------CQKVISIDIDPAKLRLAQHNASV-----------------------YG- 235 (342)
Q Consensus 190 ~~~vLDlgcGtG~----~~~~~a~~------~~~v~gvD~s~~~l~~a~~n~~~-----------------------~g- 235 (342)
+.+|||+|||||. +++.+++. +.+|+|+|+|+.|++.|++++.. .|
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 5699999999998 56666654 25899999999999999998510 01
Q ss_pred --C----CCcEEEEEccccccC-C-CCCccEEEE
Q psy15742 236 --V----SHKIQFIQGDFFALA-P-SLQGDVVFL 261 (342)
Q Consensus 236 --l----~~~i~~~~~D~~~~~-~-~~~~D~Ii~ 261 (342)
+ ..++.|.++|+.+.+ + .++||+|+|
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~c 219 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFC 219 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEE
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEE
Confidence 1 126999999999843 2 468999999
No 253
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.70 E-value=2.8e-08 Score=90.30 Aligned_cols=79 Identities=11% Similarity=-0.013 Sum_probs=57.7
Q ss_pred CCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHc-----------------CCC------------C
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVY-----------------GVS------------H 238 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~-----------------gl~------------~ 238 (342)
++.+|||+|||+|..+..++.. +.+|+|+|+|+.|++.|++++... +.. .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 5779999999999966555553 789999999999999999876432 100 0
Q ss_pred cEEEEEccccccC-------CCCCccEEEEcCCCCC
Q psy15742 239 KIQFIQGDFFALA-------PSLQGDVVFLSPPWGG 267 (342)
Q Consensus 239 ~i~~~~~D~~~~~-------~~~~~D~Ii~nPP~~~ 267 (342)
.++++.+|+.+.. +.++||+|+++-.++.
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~ 186 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEA 186 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHH
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhh
Confidence 1567888998732 2346999999865443
No 254
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.69 E-value=3.7e-08 Score=92.03 Aligned_cols=78 Identities=18% Similarity=0.143 Sum_probs=68.8
Q ss_pred CCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC--CCCCccEEEEcCCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA--PSLQGDVVFLSPPW 265 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~--~~~~~D~Ii~nPP~ 265 (342)
+.+|||+|||+|.++..+++. +.+++++|+ +.+++.|++++...++.++++++.+|+.+.. ....||+|++.-..
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 779999999999999999987 679999999 8899999999999998778999999999875 55679999997665
Q ss_pred CCC
Q psy15742 266 GGP 268 (342)
Q Consensus 266 ~~~ 268 (342)
+..
T Consensus 259 h~~ 261 (352)
T 3mcz_A 259 HYF 261 (352)
T ss_dssp GGS
T ss_pred ccC
Confidence 543
No 255
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.68 E-value=4.4e-08 Score=91.70 Aligned_cols=84 Identities=17% Similarity=0.202 Sum_probs=72.1
Q ss_pred HhcCCCCeEEeccCCCcHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCC-----CcEEEEEccccccC--CCCC
Q psy15742 185 SRCKASDVVIDGFCGCGGNTIQFAAVC--QKVISIDIDPAKLRLAQHNASVYGVS-----HKIQFIQGDFFALA--PSLQ 255 (342)
Q Consensus 185 ~~~~~~~~vLDlgcGtG~~~~~~a~~~--~~v~gvD~s~~~l~~a~~n~~~~gl~-----~~i~~~~~D~~~~~--~~~~ 255 (342)
-..++|.+|||+|||.|+-+.++|..+ ..|+++|+|+..++..++|+++.+.. .++.+...|...+. ....
T Consensus 144 L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~ 223 (359)
T 4fzv_A 144 LGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDT 223 (359)
T ss_dssp HCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTC
T ss_pred hCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhcccc
Confidence 345679999999999999999998863 47999999999999999999988753 47899999988764 3568
Q ss_pred ccEEEEcCCCCCC
Q psy15742 256 GDVVFLSPPWGGP 268 (342)
Q Consensus 256 ~D~Ii~nPP~~~~ 268 (342)
||.|++|+|+++.
T Consensus 224 fD~VLlDaPCSg~ 236 (359)
T 4fzv_A 224 YDRVLVDVPCTTD 236 (359)
T ss_dssp EEEEEEECCCCCH
T ss_pred CCEEEECCccCCC
Confidence 9999999999873
No 256
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.68 E-value=4.2e-09 Score=94.61 Aligned_cols=76 Identities=11% Similarity=0.184 Sum_probs=66.0
Q ss_pred CCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----CCCCccEEEEcCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----PSLQGDVVFLSPP 264 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----~~~~~D~Ii~nPP 264 (342)
+..+||+++|||.+++++.+.+.+++.+|.++..++..++|++. .+++++++.|....+ +..+||+|++|||
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPP 168 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPS 168 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHHCSCTTSCEEEEECCC
T ss_pred CCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHhcCCCCCccEEEECCC
Confidence 45789999999999999999889999999999999999999975 358999999987643 3347999999999
Q ss_pred CCCC
Q psy15742 265 WGGP 268 (342)
Q Consensus 265 ~~~~ 268 (342)
|...
T Consensus 169 Ye~k 172 (283)
T 2oo3_A 169 YERK 172 (283)
T ss_dssp CCST
T ss_pred CCCC
Confidence 9853
No 257
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.68 E-value=3.5e-08 Score=85.80 Aligned_cols=67 Identities=10% Similarity=0.068 Sum_probs=56.7
Q ss_pred CCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCCCCCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPPWGGP 268 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP~~~~ 268 (342)
+.+|||+|||+|.++..++.. +|+|+|+.+++.|+++ +++++++|+.+.+ +.++||+|+++..+...
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 115 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKR--------GVFVLKGTAENLPLKDESFDFALMVTTICFV 115 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHT--------TCEEEECBTTBCCSCTTCEEEEEEESCGGGS
T ss_pred CCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhc--------CCEEEEcccccCCCCCCCeeEEEEcchHhhc
Confidence 779999999999999988755 9999999999999987 4689999998765 34589999998665543
No 258
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.67 E-value=4.4e-08 Score=90.86 Aligned_cols=75 Identities=23% Similarity=0.323 Sum_probs=65.9
Q ss_pred CeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCCC
Q psy15742 191 DVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGG 267 (342)
Q Consensus 191 ~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~~ 267 (342)
.+|||+|||+|..+..+++. +.+++++|+ +.+++.|++++...++.++++++.+|+.+..+ ..||+|++.-..+.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~D~v~~~~vl~~ 245 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQEVP-SNGDIYLLSRIIGD 245 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTCCC-SSCSEEEEESCGGG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCCCC-CCCCEEEEchhccC
Confidence 79999999999999999987 679999999 99999999999888876789999999988434 57999999766553
No 259
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.65 E-value=1.9e-07 Score=80.24 Aligned_cols=75 Identities=19% Similarity=0.232 Sum_probs=63.6
Q ss_pred CCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCC--CCcEEEEEcccccc---------------
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGV--SHKIQFIQGDFFAL--------------- 250 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl--~~~i~~~~~D~~~~--------------- 250 (342)
+.++|||+|| |+.++.+|+. +.+|+++|.+++..+.|++|++.+|+ .++++++.+|+.+.
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 4679999998 5788888886 78999999999999999999999998 78999999997543
Q ss_pred ---------C-CCCCccEEEEcCCC
Q psy15742 251 ---------A-PSLQGDVVFLSPPW 265 (342)
Q Consensus 251 ---------~-~~~~~D~Ii~nPP~ 265 (342)
. ..++||+||+|-.+
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~k 132 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGRF 132 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSSS
T ss_pred HHHhhhhhccccCCCCCEEEEeCCC
Confidence 1 23689999999753
No 260
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.63 E-value=1e-07 Score=85.52 Aligned_cols=76 Identities=20% Similarity=0.265 Sum_probs=65.7
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC------CCCCccEEE
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA------PSLQGDVVF 260 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~------~~~~~D~Ii 260 (342)
+++++.++|.+||.|+.+..+++.+.+|+|+|.|+.+++.|++ +.. ++++++++|+.++. ...++|.|+
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~~~g~~~vDgIL 94 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLAALGVERVDGIL 94 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHHHTTCSCEEEEE
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHHHcCCCCcCEEE
Confidence 3568899999999999999999987899999999999999998 643 48999999998763 224799999
Q ss_pred EcCCCCC
Q psy15742 261 LSPPWGG 267 (342)
Q Consensus 261 ~nPP~~~ 267 (342)
+|+.+..
T Consensus 95 ~DLGvSS 101 (285)
T 1wg8_A 95 ADLGVSS 101 (285)
T ss_dssp EECSCCH
T ss_pred eCCcccc
Confidence 9999875
No 261
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.63 E-value=2.1e-07 Score=84.09 Aligned_cols=76 Identities=14% Similarity=0.048 Sum_probs=60.7
Q ss_pred CCeEEeccCCC---cHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEcccccc------------CC
Q psy15742 190 SDVVIDGFCGC---GGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL------------AP 252 (342)
Q Consensus 190 ~~~vLDlgcGt---G~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~------------~~ 252 (342)
..+|||+|||+ |.++..+++. +.+|+++|+|+.|++.|++++.. .++++++++|+.+. .+
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~~d 154 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK---DPNTAVFTADVRDPEYILNHPDVRRMID 154 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT---CTTEEEEECCTTCHHHHHHSHHHHHHCC
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC---CCCeEEEEeeCCCchhhhccchhhccCC
Confidence 47999999999 9887766654 68999999999999999999853 24799999999753 22
Q ss_pred CCCccEEEEcCCCCCC
Q psy15742 253 SLQGDVVFLSPPWGGP 268 (342)
Q Consensus 253 ~~~~D~Ii~nPP~~~~ 268 (342)
..+||+|+++--++..
T Consensus 155 ~~~~d~v~~~~vlh~~ 170 (274)
T 2qe6_A 155 FSRPAAIMLVGMLHYL 170 (274)
T ss_dssp TTSCCEEEETTTGGGS
T ss_pred CCCCEEEEEechhhhC
Confidence 2479999997665544
No 262
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.63 E-value=3.7e-09 Score=95.80 Aligned_cols=75 Identities=16% Similarity=0.133 Sum_probs=56.5
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHH-HcCCCCcEEEE--EccccccCCCCCccEEEEcC
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNAS-VYGVSHKIQFI--QGDFFALAPSLQGDVVFLSP 263 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~-~~gl~~~i~~~--~~D~~~~~~~~~~D~Ii~nP 263 (342)
++++.+|||+|||+|.++..+++. .+|+|+|+++ ++..++++.. ......++.++ ++|+.+++ +.+||+|++|.
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-~~~fD~Vvsd~ 156 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME-PFQADTVLCDI 156 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC-CCCCSEEEECC
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc-CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC-CCCcCEEEECC
Confidence 356889999999999999999988 7899999998 5433322210 01111268999 99998875 56899999997
Q ss_pred C
Q psy15742 264 P 264 (342)
Q Consensus 264 P 264 (342)
.
T Consensus 157 ~ 157 (276)
T 2wa2_A 157 G 157 (276)
T ss_dssp C
T ss_pred C
Confidence 7
No 263
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.62 E-value=2e-08 Score=91.43 Aligned_cols=79 Identities=6% Similarity=-0.034 Sum_probs=56.6
Q ss_pred CCCeEEeccCCCcHHHHHHH----Hh--CCEE--EEEeCCHHHHHHHHHHHHHc-CCCCcE--EEEEccccccC------
Q psy15742 189 ASDVVIDGFCGCGGNTIQFA----AV--CQKV--ISIDIDPAKLRLAQHNASVY-GVSHKI--QFIQGDFFALA------ 251 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a----~~--~~~v--~gvD~s~~~l~~a~~n~~~~-gl~~~i--~~~~~D~~~~~------ 251 (342)
++.+|||+|||+|.++..++ .. +..| +|+|.|+.|++.|++++... ++ .++ .+..+++.++.
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNL-ENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSC-TTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCC-CcceEEEEecchhhhhhhhccc
Confidence 46799999999998765432 22 3444 99999999999999998754 44 344 44566765543
Q ss_pred -CCCCccEEEEcCCCCCC
Q psy15742 252 -PSLQGDVVFLSPPWGGP 268 (342)
Q Consensus 252 -~~~~~D~Ii~nPP~~~~ 268 (342)
++++||+|++.--.+..
T Consensus 131 ~~~~~fD~V~~~~~l~~~ 148 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYV 148 (292)
T ss_dssp TCCCCEEEEEEESCGGGC
T ss_pred cCCCceeEEEEeeeeeec
Confidence 35689999997655544
No 264
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.62 E-value=7.3e-09 Score=93.30 Aligned_cols=75 Identities=17% Similarity=0.145 Sum_probs=56.1
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHH-cCCCCcEEEE--EccccccCCCCCccEEEEcC
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASV-YGVSHKIQFI--QGDFFALAPSLQGDVVFLSP 263 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~-~gl~~~i~~~--~~D~~~~~~~~~~D~Ii~nP 263 (342)
++++.+|||+|||+|.++..+++. .+|+|+|+++ ++..++++... .....++.++ ++|+.+++ +.+||+|++|.
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-~~~fD~V~sd~ 148 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP-VERTDVIMCDV 148 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC-CCCCSEEEECC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc-CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC-CCCCcEEEEeC
Confidence 457889999999999999999988 7899999998 53322211100 0111168899 99999875 56899999997
Q ss_pred C
Q psy15742 264 P 264 (342)
Q Consensus 264 P 264 (342)
.
T Consensus 149 ~ 149 (265)
T 2oxt_A 149 G 149 (265)
T ss_dssp C
T ss_pred c
Confidence 7
No 265
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.58 E-value=2.1e-08 Score=91.19 Aligned_cols=87 Identities=13% Similarity=0.054 Sum_probs=60.2
Q ss_pred CCCeEEeccCCCcHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEE-EEccccccC----CCCCccEEEEc
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVC-QKVISIDIDPAKLRLAQHNASVYGVSHKIQF-IQGDFFALA----PSLQGDVVFLS 262 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~-~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~-~~~D~~~~~----~~~~~D~Ii~n 262 (342)
++.+|||+|||||.++..+++.+ .+|+|+|+|+.|++++.++- .++.. ...|+.... +...||+|++|
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~------~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d 158 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD------DRVRSMEQYNFRYAEPVDFTEGLPSFASID 158 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC------TTEEEECSCCGGGCCGGGCTTCCCSEEEEC
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------cccceecccCceecchhhCCCCCCCEEEEE
Confidence 47799999999999999998884 69999999999999865431 13322 233443332 23359999999
Q ss_pred CCCCCCccccccccccccCcC
Q psy15742 263 PPWGGPEYARSSFSIDNIFPE 283 (342)
Q Consensus 263 PP~~~~~~~~~~~~~~~~~~~ 283 (342)
-.|+.. ......+.+++++
T Consensus 159 ~sf~sl--~~vL~e~~rvLkp 177 (291)
T 3hp7_A 159 VSFISL--NLILPALAKILVD 177 (291)
T ss_dssp CSSSCG--GGTHHHHHHHSCT
T ss_pred eeHhhH--HHHHHHHHHHcCc
Confidence 888743 2334445566654
No 266
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.58 E-value=1.8e-08 Score=87.29 Aligned_cols=60 Identities=20% Similarity=0.097 Sum_probs=49.8
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-CCCCccEEEEcCCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVFLSPPWG 266 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~D~Ii~nPP~~ 266 (342)
.++.+|||+|||+|.++..++ .+++|+|+|+. +++++++|+.+.+ +.++||+|+++..++
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~---~~v~~~D~s~~----------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 126 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR---NPVHCFDLASL----------------DPRVTVCDMAQVPLEDESVDVAVFCLSLM 126 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC---SCEEEEESSCS----------------STTEEESCTTSCSCCTTCEEEEEEESCCC
T ss_pred CCCCeEEEECCcCCHHHHHhh---ccEEEEeCCCC----------------CceEEEeccccCCCCCCCEeEEEEehhcc
Confidence 457799999999999988773 78999999986 3568899998865 456899999988775
No 267
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.58 E-value=1.6e-08 Score=89.30 Aligned_cols=90 Identities=10% Similarity=-0.007 Sum_probs=57.0
Q ss_pred CCCeEEeccCCCcHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCC--cEEEEEccccccCCCCCccEEEEcCCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVC-QKVISIDIDPAKLRLAQHNASVYGVSH--KIQFIQGDFFALAPSLQGDVVFLSPPW 265 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~-~~v~gvD~s~~~l~~a~~n~~~~gl~~--~i~~~~~D~~~~~~~~~~D~Ii~nPP~ 265 (342)
++.+|||+|||||.++..+++.+ .+|+|+|+|+.|+++|+++........ ++.+... .++ +...+|.+.+|..|
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~d~~~~D~v~ 113 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVL--ADF-EQGRPSFTSIDVSF 113 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCG--GGC-CSCCCSEEEECCSS
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCH--hHc-CcCCCCEEEEEEEh
Confidence 36799999999999999999986 599999999999999887653221100 1111111 111 11135777777776
Q ss_pred CCCccccccccccccCcC
Q psy15742 266 GGPEYARSSFSIDNIFPE 283 (342)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~ 283 (342)
... ......+.+++++
T Consensus 114 ~~l--~~~l~~i~rvLkp 129 (232)
T 3opn_A 114 ISL--DLILPPLYEILEK 129 (232)
T ss_dssp SCG--GGTHHHHHHHSCT
T ss_pred hhH--HHHHHHHHHhccC
Confidence 543 2233444555554
No 268
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.50 E-value=1.7e-07 Score=79.68 Aligned_cols=68 Identities=15% Similarity=0.089 Sum_probs=53.9
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh-C----------CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEE-EccccccC---
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV-C----------QKVISIDIDPAKLRLAQHNASVYGVSHKIQFI-QGDFFALA--- 251 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~-~----------~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~-~~D~~~~~--- 251 (342)
++++.+|||+|||+|.++..+++. + .+|+|+|+|+.+ .+ .+++++ .+|+.+..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~~d~~~~~~~~ 87 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCPADVTDPRTSQ 87 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECSCCTTSHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEeccCCCHHHHH
Confidence 456889999999999999999987 3 789999999831 22 368899 99976542
Q ss_pred ------CCCCccEEEEcCCCC
Q psy15742 252 ------PSLQGDVVFLSPPWG 266 (342)
Q Consensus 252 ------~~~~~D~Ii~nPP~~ 266 (342)
++.+||+|++|++..
T Consensus 88 ~~~~~~~~~~fD~V~~~~~~~ 108 (196)
T 2nyu_A 88 RILEVLPGRRADVILSDMAPN 108 (196)
T ss_dssp HHHHHSGGGCEEEEEECCCCC
T ss_pred HHHHhcCCCCCcEEEeCCCCC
Confidence 234799999998654
No 269
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.49 E-value=1.5e-08 Score=96.98 Aligned_cols=77 Identities=8% Similarity=0.088 Sum_probs=57.6
Q ss_pred CCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEE-EEEccccccC-CCCCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQ-FIQGDFFALA-PSLQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~-~~~~D~~~~~-~~~~~D~Ii~nPP~ 265 (342)
+++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++ ++..... +...+...++ ++++||+|+++-.+
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl 181 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRRTEGPANVIYAANTL 181 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHHHHCCEEEEEEESCG
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcccCCCCEEEEEECChH
Confidence 4678999999999999999999989999999999999999876 4421111 2233333332 34689999998766
Q ss_pred CCC
Q psy15742 266 GGP 268 (342)
Q Consensus 266 ~~~ 268 (342)
++.
T Consensus 182 ~h~ 184 (416)
T 4e2x_A 182 CHI 184 (416)
T ss_dssp GGC
T ss_pred Hhc
Confidence 554
No 270
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=98.45 E-value=3.2e-07 Score=85.67 Aligned_cols=139 Identities=14% Similarity=0.174 Sum_probs=80.8
Q ss_pred CeEEeccCCCcHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCC----CCccEEEEcC
Q psy15742 191 DVVIDGFCGCGGNTIQFAAVC---QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPS----LQGDVVFLSP 263 (342)
Q Consensus 191 ~~vLDlgcGtG~~~~~~a~~~---~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~----~~~D~Ii~nP 263 (342)
.+|+|+|||.|++++.+.+.| ..|.++|+++.+++..+.|.. +..++++|+.++... ..+|+|+.+|
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~------~~~~~~~Di~~~~~~~~~~~~~D~l~~gp 76 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP------HTQLLAKTIEGITLEEFDRLSFDMILMSP 76 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT------TSCEECSCGGGCCHHHHHHHCCSEEEECC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc------ccccccCCHHHccHhHcCcCCcCEEEEcC
Confidence 479999999999999998876 368999999999999999974 345788999887521 2699999999
Q ss_pred CCCCCccccccccccccCcCCCCchhhhHhhhccC--CCceee--cCCC---CCHHHHHH-hhCCCcEEEE--ecccCC-
Q psy15742 264 PWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGIS--PNVGYY--LPRT---SDVFEIFH-DSGKKGSFIS--LTGRQM- 332 (342)
Q Consensus 264 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--l~~~---~~~~~l~~-~~~~~~~i~~--i~~~~~- 332 (342)
|+.+.+..+......+ ... .-...++++...+. |..+++ ++.- .....+.. +..-||.+.. +.+.++
T Consensus 77 PCq~fS~ag~~~g~~d-~r~-~l~~~~~~~i~~~~~~P~~~~~ENV~~l~~~~~~~~i~~~l~~~GY~v~~~vl~a~~~G 154 (343)
T 1g55_A 77 PCQPFTRIGRQGDMTD-SRT-NSFLHILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLG 154 (343)
T ss_dssp C--------------------CHHHHHHHHGGGCSSCCSEEEEEEETTGGGSHHHHHHHHHHHHTTEEEEEEEECGGGGT
T ss_pred CCcchhhcCCcCCccC-ccc-hHHHHHHHHHHHhcCCCCEEEEeCCccccCHHHHHHHHHHHHHCCCeeEEEEEEHHHCC
Confidence 9876654432111111 010 00113556666665 666555 3431 11222222 2234666554 445555
Q ss_pred CCCCC
Q psy15742 333 FSPSQ 337 (342)
Q Consensus 333 fp~t~ 337 (342)
.|+++
T Consensus 155 vPQ~R 159 (343)
T 1g55_A 155 IPNSR 159 (343)
T ss_dssp CSCCC
T ss_pred CCCcc
Confidence 55554
No 271
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.40 E-value=5.1e-08 Score=89.56 Aligned_cols=75 Identities=20% Similarity=0.294 Sum_probs=56.1
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeC----CHHHHHHHHHHHHHcCCCCcEEEEEc-cccccCCCCCccEEEE
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAVCQKVISIDI----DPAKLRLAQHNASVYGVSHKIQFIQG-DFFALAPSLQGDVVFL 261 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~----s~~~l~~a~~n~~~~gl~~~i~~~~~-D~~~~~~~~~~D~Ii~ 261 (342)
++++.+|||+|||+|.++..+++. .+|+|+|+ ++.+++.+. .+..+. +++.++++ |+.+++ ..+||+|++
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~~--~~~~~~-~~v~~~~~~D~~~l~-~~~fD~V~s 154 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPIP--MSTYGW-NLVRLQSGVDVFFIP-PERCDTLLC 154 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCCC--CCSTTG-GGEEEECSCCTTTSC-CCCCSEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHHH--hhhcCC-CCeEEEeccccccCC-cCCCCEEEE
Confidence 456889999999999999999988 58999999 554432111 111122 47999999 998764 458999999
Q ss_pred cCCCC
Q psy15742 262 SPPWG 266 (342)
Q Consensus 262 nPP~~ 266 (342)
|-++.
T Consensus 155 d~~~~ 159 (305)
T 2p41_A 155 DIGES 159 (305)
T ss_dssp CCCCC
T ss_pred CCccc
Confidence 97764
No 272
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.40 E-value=9.1e-08 Score=89.40 Aligned_cols=76 Identities=21% Similarity=0.239 Sum_probs=59.0
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~ 265 (342)
+++.+|||+|||+|.++..+++. ..+++++|+ +.++. +.+++..++.++++++.+|+++..+ .||+|++.--.
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~~p--~~D~v~~~~vl 257 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLREVP--HADVHVLKRIL 257 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTCCC--CCSEEEEESCG
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCCCC--CCcEEEEehhc
Confidence 46779999999999999999986 568999999 44554 4444445666689999999985444 89999997666
Q ss_pred CCC
Q psy15742 266 GGP 268 (342)
Q Consensus 266 ~~~ 268 (342)
+..
T Consensus 258 h~~ 260 (348)
T 3lst_A 258 HNW 260 (348)
T ss_dssp GGS
T ss_pred cCC
Confidence 543
No 273
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.40 E-value=1.6e-06 Score=79.23 Aligned_cols=60 Identities=23% Similarity=0.351 Sum_probs=51.0
Q ss_pred HHHHHHHHHHh-cCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcC
Q psy15742 176 PEKVAQHIASR-CKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYG 235 (342)
Q Consensus 176 ~e~~~~~i~~~-~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~g 235 (342)
|+.+++.+... ..+|+.|||+|||+|++++.+++.|.+++|+|+++.+++.|++|++...
T Consensus 221 p~~l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 221 PLELAERLVRMFSFVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp CHHHHHHHHHHHCCTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHhc
Confidence 35555555544 4578899999999999999999999999999999999999999997653
No 274
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.36 E-value=4.4e-06 Score=75.76 Aligned_cols=109 Identities=12% Similarity=0.069 Sum_probs=80.9
Q ss_pred hcCCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHc--C-C-CCcEEEEEccccccCC--CCCcc
Q psy15742 186 RCKASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVY--G-V-SHKIQFIQGDFFALAP--SLQGD 257 (342)
Q Consensus 186 ~~~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~--g-l-~~~i~~~~~D~~~~~~--~~~~D 257 (342)
..+..++||=+|.|.|+.+.++++. ..+|+.||+|+..++.|++.+... + + +++++++.+|+.++.. ..+||
T Consensus 80 ~~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yD 159 (294)
T 3o4f_A 80 AHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp HSSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEE
T ss_pred hCCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCC
Confidence 3455789999999999999999986 579999999999999999987432 2 1 3589999999999873 35899
Q ss_pred EEEEcCCCCCCccccccccccccCcCCCCchhhhHhhhccCCCceeec
Q psy15742 258 VVFLSPPWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYL 305 (342)
Q Consensus 258 ~Ii~nPP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (342)
+|++|.+-.. . .. ..+. ....+..+.+.+.+++++..
T Consensus 160 vIi~D~~dp~----~--~~-~~L~----t~eFy~~~~~~L~p~Gv~v~ 196 (294)
T 3o4f_A 160 VIISDCTDPI----G--PG-ESLF----TSAFYEGCKRCLNPGGIFVA 196 (294)
T ss_dssp EEEESCCCCC----C--TT-CCSS----CCHHHHHHHHTEEEEEEEEE
T ss_pred EEEEeCCCcC----C--Cc-hhhc----CHHHHHHHHHHhCCCCEEEE
Confidence 9999976211 1 00 1111 22255567777888888775
No 275
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.35 E-value=8.4e-07 Score=80.68 Aligned_cols=62 Identities=15% Similarity=0.091 Sum_probs=47.9
Q ss_pred cCCCCeEEeccCCC------cHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEE-EEccccccCCCCCc
Q psy15742 187 CKASDVVIDGFCGC------GGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQF-IQGDFFALAPSLQG 256 (342)
Q Consensus 187 ~~~~~~vLDlgcGt------G~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~-~~~D~~~~~~~~~~ 256 (342)
++++.+|||+|||+ |+ ..+++. +.+|+|+|+|+. + .++++ +++|+.+.....+|
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v-~~v~~~i~gD~~~~~~~~~f 124 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------V-SDADSTLIGDCATVHTANKW 124 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------B-CSSSEEEESCGGGCCCSSCE
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------C-CCCEEEEECccccCCccCcc
Confidence 45688999999944 77 333443 479999999997 1 25788 99999987655689
Q ss_pred cEEEEcCC
Q psy15742 257 DVVFLSPP 264 (342)
Q Consensus 257 D~Ii~nPP 264 (342)
|+|++|++
T Consensus 125 D~Vvsn~~ 132 (290)
T 2xyq_A 125 DLIISDMY 132 (290)
T ss_dssp EEEEECCC
T ss_pred cEEEEcCC
Confidence 99999975
No 276
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=98.32 E-value=1.7e-06 Score=77.40 Aligned_cols=62 Identities=19% Similarity=0.353 Sum_probs=51.5
Q ss_pred CHHHHHHHHHHh-cCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCC
Q psy15742 175 TPEKVAQHIASR-CKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGV 236 (342)
Q Consensus 175 ~~e~~~~~i~~~-~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl 236 (342)
-|..+++.+... .++|+.|||+|||+|+.++.+++.|.+++|+|+++.+++.|++|++.+++
T Consensus 197 ~p~~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 197 KPRDLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CCHHHHHHHHHHHCCTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhccC
Confidence 456666665544 56889999999999999999999999999999999999999999987664
No 277
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.32 E-value=1.2e-06 Score=87.60 Aligned_cols=74 Identities=12% Similarity=0.139 Sum_probs=61.5
Q ss_pred CCeEEeccCCCcHHH---HHHHHh-CC--EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcC
Q psy15742 190 SDVVIDGFCGCGGNT---IQFAAV-CQ--KVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSP 263 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~---~~~a~~-~~--~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nP 263 (342)
+..|+|+|||+|-++ +.+++. +. +|++||.|+ +...|++..+.||+.++|+++++|+.++....++|+||+..
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSEw 436 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSEL 436 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECCC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEEc
Confidence 357999999999994 444444 33 689999998 66688999999999999999999999987667999999965
Q ss_pred C
Q psy15742 264 P 264 (342)
Q Consensus 264 P 264 (342)
-
T Consensus 437 M 437 (637)
T 4gqb_A 437 L 437 (637)
T ss_dssp C
T ss_pred C
Confidence 4
No 278
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.28 E-value=2.5e-07 Score=87.25 Aligned_cols=76 Identities=18% Similarity=0.103 Sum_probs=56.9
Q ss_pred HHHHHHHH-hcCCCCeEEeccCC------CcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccc
Q psy15742 178 KVAQHIAS-RCKASDVVIDGFCG------CGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDF 247 (342)
Q Consensus 178 ~~~~~i~~-~~~~~~~vLDlgcG------tG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~ 247 (342)
.+.+.+.. ...++.+|||+||| +|+.++.+++. +.+|+|+|+|+.|. . . .++++++++|+
T Consensus 204 ~~Ye~lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~-~-~~rI~fv~GDa 273 (419)
T 3sso_A 204 PHYDRHFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------V-D-ELRIRTIQGDQ 273 (419)
T ss_dssp HHHHHHHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------G-C-BTTEEEEECCT
T ss_pred HHHHHHHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------h-c-CCCcEEEEecc
Confidence 34444443 34567899999999 78888887764 67999999999872 1 1 24899999999
Q ss_pred cccC-C------CCCccEEEEcC
Q psy15742 248 FALA-P------SLQGDVVFLSP 263 (342)
Q Consensus 248 ~~~~-~------~~~~D~Ii~nP 263 (342)
.+.+ . .++||+|++|-
T Consensus 274 ~dlpf~~~l~~~d~sFDlVisdg 296 (419)
T 3sso_A 274 NDAEFLDRIARRYGPFDIVIDDG 296 (419)
T ss_dssp TCHHHHHHHHHHHCCEEEEEECS
T ss_pred cccchhhhhhcccCCccEEEECC
Confidence 8753 2 46899999974
No 279
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=98.21 E-value=3.3e-06 Score=79.68 Aligned_cols=105 Identities=19% Similarity=0.203 Sum_probs=72.4
Q ss_pred CeEEeccCCCcHHHHHHHHhCCE-EEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC---------CCCCccEEE
Q psy15742 191 DVVIDGFCGCGGNTIQFAAVCQK-VISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA---------PSLQGDVVF 260 (342)
Q Consensus 191 ~~vLDlgcGtG~~~~~~a~~~~~-v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~---------~~~~~D~Ii 260 (342)
.+++|+|||.|++++.+.+.|.+ |.++|+++.+++..+.|.. +..++++|+.++. ....+|+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~------~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ 76 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFP------RSLHVQEDVSLLNAEIIKGFFKNDMPIDGII 76 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCT------TSEEECCCGGGCCHHHHHHHHCSCCCCCEEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCC------CCceEecChhhcCHHHHHhhcccCCCeeEEE
Confidence 47999999999999999888765 5699999999999998863 4678899998764 235799999
Q ss_pred EcCCCCCCccccccccccccCcCCCCchhhhHhhhccCCCceee
Q psy15742 261 LSPPWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYY 304 (342)
Q Consensus 261 ~nPP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (342)
.+||+.+.+..+.. ...+- .+ .=...++++...+.|..+++
T Consensus 77 ggpPCQ~fS~ag~~-~~~d~-r~-~L~~~~~~~v~~~~P~~~v~ 117 (376)
T 3g7u_A 77 GGPPCQGFSSIGKG-NPDDS-RN-QLYMHFYRLVSELQPLFFLA 117 (376)
T ss_dssp ECCCCCTTC--------CHH-HH-HHHHHHHHHHHHHCCSEEEE
T ss_pred ecCCCCCcccccCC-CCCCc-hH-HHHHHHHHHHHHhCCCEEEE
Confidence 99999876544421 11100 00 00114556666667766655
No 280
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.20 E-value=2.3e-06 Score=85.61 Aligned_cols=74 Identities=14% Similarity=0.052 Sum_probs=58.6
Q ss_pred CCeEEeccCCCcHHHH---HHHHh-C-----------CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC--
Q psy15742 190 SDVVIDGFCGCGGNTI---QFAAV-C-----------QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-- 252 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~---~~a~~-~-----------~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-- 252 (342)
+..|+|+|||+|.++. .+++. + .+|+|||.|+.++..++.... +|+.++|+++.+|+.++..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 4589999999999964 33332 2 399999999988766555544 8888889999999999853
Q ss_pred ----CCCccEEEEcCC
Q psy15742 253 ----SLQGDVVFLSPP 264 (342)
Q Consensus 253 ----~~~~D~Ii~nPP 264 (342)
..++|+||+...
T Consensus 489 ~~~~~ekVDIIVSElm 504 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELL 504 (745)
T ss_dssp HHTTCCCCSEEEECCC
T ss_pred ccCCCCcccEEEEecc
Confidence 568999999776
No 281
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.17 E-value=1.6e-06 Score=77.84 Aligned_cols=78 Identities=18% Similarity=0.101 Sum_probs=57.0
Q ss_pred CCeEEeccCCC--cHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC---C----CCCcc
Q psy15742 190 SDVVIDGFCGC--GGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA---P----SLQGD 257 (342)
Q Consensus 190 ~~~vLDlgcGt--G~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~---~----~~~~D 257 (342)
..+|||+|||+ |.+...+++. +.+|+++|.|+.|++.|+.++...+. .+++++++|+.+.. . ...||
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~-~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPE-GRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSS-SEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCC-CcEEEEEecccChhhhhcccccccccC
Confidence 36899999997 4445555543 68999999999999999999865432 47999999998852 1 23455
Q ss_pred -----EEEEcCCCCCC
Q psy15742 258 -----VVFLSPPWGGP 268 (342)
Q Consensus 258 -----~Ii~nPP~~~~ 268 (342)
.|++|--.+..
T Consensus 158 ~~~p~av~~~avLH~l 173 (277)
T 3giw_A 158 LTRPVALTVIAIVHFV 173 (277)
T ss_dssp TTSCCEEEEESCGGGS
T ss_pred cCCcchHHhhhhHhcC
Confidence 57776655544
No 282
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.17 E-value=1.5e-06 Score=81.18 Aligned_cols=72 Identities=19% Similarity=0.267 Sum_probs=58.3
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCC
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPP 264 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP 264 (342)
++++.+|||+|||+|.++..+++. +.+++++|+ +.+++.|++ . ++++++.+|+.+..+ .||+|++.-.
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~~~p--~~D~v~~~~~ 255 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG------S-NNLTYVGGDMFTSIP--NADAVLLKYI 255 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------B-TTEEEEECCTTTCCC--CCSEEEEESC
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc------C-CCcEEEeccccCCCC--CccEEEeehh
Confidence 346789999999999999999986 679999999 999988764 1 359999999987433 3999999766
Q ss_pred CCCC
Q psy15742 265 WGGP 268 (342)
Q Consensus 265 ~~~~ 268 (342)
.+..
T Consensus 256 lh~~ 259 (352)
T 1fp2_A 256 LHNW 259 (352)
T ss_dssp GGGS
T ss_pred hccC
Confidence 5543
No 283
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.13 E-value=2.6e-06 Score=80.19 Aligned_cols=70 Identities=20% Similarity=0.280 Sum_probs=56.7
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~ 265 (342)
.++.+|||+|||+|.++..+++. ..+++++|+ +.+++.|+.+ ++++++.+|+++..+.. |+|++.-..
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~~~p~~--D~v~~~~vl 271 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFDGVPKG--DAIFIKWIC 271 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTTCCCCC--SEEEEESCG
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCCCCCCC--CEEEEechh
Confidence 35679999999999999999986 678999999 8888776642 47999999998744433 999997665
Q ss_pred CC
Q psy15742 266 GG 267 (342)
Q Consensus 266 ~~ 267 (342)
+.
T Consensus 272 h~ 273 (368)
T 3reo_A 272 HD 273 (368)
T ss_dssp GG
T ss_pred hc
Confidence 53
No 284
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.08 E-value=8e-06 Score=76.11 Aligned_cols=72 Identities=18% Similarity=0.127 Sum_probs=57.2
Q ss_pred HhcCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-CCCccEEEEcC
Q psy15742 185 SRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-SLQGDVVFLSP 263 (342)
Q Consensus 185 ~~~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-~~~~D~Ii~nP 263 (342)
..+++|.+++|+||++|+++..+++.+.+|+|||..+ +- ..+. .. ++++++++|++.+.+ ...+|+|+||-
T Consensus 207 ~~l~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~-l~----~~l~--~~-~~V~~~~~d~~~~~~~~~~~D~vvsDm 278 (375)
T 4auk_A 207 ERLANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGP-MA----QSLM--DT-GQVTWLREDGFKFRPTRSNISWMVCDM 278 (375)
T ss_dssp HHSCTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSC-CC----HHHH--TT-TCEEEECSCTTTCCCCSSCEEEEEECC
T ss_pred ccCCCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhh-cC----hhhc--cC-CCeEEEeCccccccCCCCCcCEEEEcC
Confidence 3467899999999999999999999999999999764 11 1121 11 479999999998865 45899999985
Q ss_pred C
Q psy15742 264 P 264 (342)
Q Consensus 264 P 264 (342)
-
T Consensus 279 ~ 279 (375)
T 4auk_A 279 V 279 (375)
T ss_dssp S
T ss_pred C
Confidence 4
No 285
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.08 E-value=9e-06 Score=76.02 Aligned_cols=73 Identities=23% Similarity=0.306 Sum_probs=59.5
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSP 263 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nP 263 (342)
.+..+|+|+|||+|.++..+++. ..+++..|. |.+++.|++++...+ .++++++.+|+++.+. ..+|++++.=
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~~-~~~D~~~~~~ 252 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKDPL-PEADLYILAR 252 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTSCC-CCCSEEEEES
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccCCC-CCceEEEeee
Confidence 35679999999999999999987 678888887 889999999987655 4699999999987543 3589999843
No 286
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=98.07 E-value=1.6e-05 Score=73.49 Aligned_cols=75 Identities=19% Similarity=0.182 Sum_probs=60.7
Q ss_pred CCeEEeccCCCcHHHHHHHHhCCE-EEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCC--CCccEEEEcCCCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAAVCQK-VISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPS--LQGDVVFLSPPWG 266 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~~~~~-v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~--~~~D~Ii~nPP~~ 266 (342)
+.+++|+|||+|++++.+.+.|.+ +.++|+++.+++..+.|.... . ++|+.++... ..+|+|+.+||+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~-----~---~~Di~~~~~~~~~~~D~l~~gpPCQ 82 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK-----P---EGDITQVNEKTIPDHDILCAGFPCQ 82 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC-----C---BSCGGGSCGGGSCCCSEEEEECCCT
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC-----C---cCCHHHcCHhhCCCCCEEEECCCCC
Confidence 468999999999999999888654 778999999999999997421 1 6888876522 3699999999999
Q ss_pred CCcccc
Q psy15742 267 GPEYAR 272 (342)
Q Consensus 267 ~~~~~~ 272 (342)
+.+..+
T Consensus 83 ~fS~ag 88 (327)
T 2c7p_A 83 AFSISG 88 (327)
T ss_dssp TTCTTS
T ss_pred Ccchhc
Confidence 876554
No 287
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.04 E-value=8.6e-06 Score=76.47 Aligned_cols=69 Identities=22% Similarity=0.303 Sum_probs=55.7
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~ 265 (342)
+++.+|||+|||+|.++..+++. ..+++++|+ +.+++.|+.+ ++++++.+|+++..+. . |+|++.--.
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~D~~~~~p~-~-D~v~~~~vl 269 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-------PGVTHVGGDMFKEVPS-G-DTILMKWIL 269 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTTCCCC-C-SEEEEESCG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-------CCeEEEeCCcCCCCCC-C-CEEEehHHh
Confidence 45689999999999999999986 678999999 8888776642 4899999999884343 3 999986554
Q ss_pred C
Q psy15742 266 G 266 (342)
Q Consensus 266 ~ 266 (342)
+
T Consensus 270 h 270 (364)
T 3p9c_A 270 H 270 (364)
T ss_dssp G
T ss_pred c
Confidence 4
No 288
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.02 E-value=4.7e-06 Score=78.42 Aligned_cols=71 Identities=25% Similarity=0.341 Sum_probs=57.3
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~ 265 (342)
+++.+|||+|||+|.++..+++. ..+++++|+ +.+++.|++ . ++++++.+|+.+..+. ||+|++.-..
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~~~~~--~D~v~~~~~l 277 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP------L-SGIEHVGGDMFASVPQ--GDAMILKAVC 277 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------C-TTEEEEECCTTTCCCC--EEEEEEESSG
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh------c-CCCEEEeCCcccCCCC--CCEEEEeccc
Confidence 45789999999999999999987 568899999 999987764 1 3699999999884333 9999997665
Q ss_pred CCC
Q psy15742 266 GGP 268 (342)
Q Consensus 266 ~~~ 268 (342)
+..
T Consensus 278 h~~ 280 (372)
T 1fp1_D 278 HNW 280 (372)
T ss_dssp GGS
T ss_pred ccC
Confidence 543
No 289
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=98.00 E-value=2.4e-06 Score=78.98 Aligned_cols=78 Identities=15% Similarity=0.193 Sum_probs=62.9
Q ss_pred CCHHHHHHHHHH-hcCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC
Q psy15742 174 VTPEKVAQHIAS-RCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP 252 (342)
Q Consensus 174 ~~~e~~~~~i~~-~~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~ 252 (342)
.-|..+++.+.. ..++|+.|||++||+|+.++.+.+.|.+.+|+|+++.+++.|+.+++..+. ....++.|+.+++.
T Consensus 236 ~kp~~l~~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r~~~~~~--~~~~~~~~~~~i~~ 313 (323)
T 1boo_A 236 RFPAKLPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLDNNI--SEEKITDIYNRILN 313 (323)
T ss_dssp CCCTHHHHHHHHHHCCTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGSCSCS--CHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHHHHhccc--chHHHHHHHHHHHc
Confidence 344556666554 457899999999999999999999999999999999999999999987775 45666777776654
Q ss_pred C
Q psy15742 253 S 253 (342)
Q Consensus 253 ~ 253 (342)
.
T Consensus 314 ~ 314 (323)
T 1boo_A 314 G 314 (323)
T ss_dssp T
T ss_pred C
Confidence 3
No 290
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.94 E-value=9e-06 Score=76.01 Aligned_cols=71 Identities=23% Similarity=0.283 Sum_probs=57.2
Q ss_pred CCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCC
Q psy15742 188 KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPW 265 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~ 265 (342)
+++.+|||+|||+|.++..+++. ..+++++|+ +.+++.|+. . .+++++.+|+.+..+ .||+|++.-.+
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~~~~--~~D~v~~~~vl 261 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------N-ENLNFVGGDMFKSIP--SADAVLLKWVL 261 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------C-SSEEEEECCTTTCCC--CCSEEEEESCG
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------C-CCcEEEeCccCCCCC--CceEEEEcccc
Confidence 45679999999999999999987 568999999 788877654 2 369999999988323 59999997766
Q ss_pred CCC
Q psy15742 266 GGP 268 (342)
Q Consensus 266 ~~~ 268 (342)
+..
T Consensus 262 h~~ 264 (358)
T 1zg3_A 262 HDW 264 (358)
T ss_dssp GGS
T ss_pred cCC
Confidence 543
No 291
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.86 E-value=4.9e-05 Score=68.64 Aligned_cols=75 Identities=16% Similarity=0.139 Sum_probs=61.4
Q ss_pred CCeEEeccCCCcHHHHHHHHh-------CCEEEEEeCCH--------------------------HHHHHHHHHHHHcCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAAV-------CQKVISIDIDP--------------------------AKLRLAQHNASVYGV 236 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~~-------~~~v~gvD~s~--------------------------~~l~~a~~n~~~~gl 236 (342)
.+.|||+|+..|..++.+|.. +.+|+++|..+ ..++.+++|++..|+
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 459999999999999988753 56899999642 147789999999999
Q ss_pred C-CcEEEEEccccccCC---CCCccEEEEcCC
Q psy15742 237 S-HKIQFIQGDFFALAP---SLQGDVVFLSPP 264 (342)
Q Consensus 237 ~-~~i~~~~~D~~~~~~---~~~~D~Ii~nPP 264 (342)
. ++++++.||+.+.++ ..+||+|++|--
T Consensus 187 ~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD 218 (282)
T 2wk1_A 187 LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD 218 (282)
T ss_dssp CSTTEEEEESCHHHHSTTCCCCCEEEEEECCC
T ss_pred CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC
Confidence 4 799999999988653 357999999853
No 292
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=97.86 E-value=4.5e-05 Score=70.68 Aligned_cols=76 Identities=18% Similarity=0.341 Sum_probs=61.4
Q ss_pred CeEEeccCCCcHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC----CCCccEEEEcC
Q psy15742 191 DVVIDGFCGCGGNTIQFAAVCQ---KVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP----SLQGDVVFLSP 263 (342)
Q Consensus 191 ~~vLDlgcGtG~~~~~~a~~~~---~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~----~~~~D~Ii~nP 263 (342)
-+++|++||.|+++..+.+.|. .|.++|+++.+.+..+.|.. ...++.+|+.++.. ...+|+++..|
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~------~~~~~~~DI~~~~~~~~~~~~~D~l~ggp 77 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP------ETNLLNRNIQQLTPQVIKKWNVDTILMSP 77 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT------TSCEECCCGGGCCHHHHHHTTCCEEEECC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC------CCceeccccccCCHHHhccCCCCEEEecC
Confidence 3799999999999999988763 57899999999999988863 34567889887752 23699999999
Q ss_pred CCCCCcccc
Q psy15742 264 PWGGPEYAR 272 (342)
Q Consensus 264 P~~~~~~~~ 272 (342)
|+.+.+..+
T Consensus 78 PCQ~fS~ag 86 (333)
T 4h0n_A 78 PCQPFTRNG 86 (333)
T ss_dssp CCCCSEETT
T ss_pred CCcchhhhh
Confidence 999876544
No 293
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.79 E-value=6.3e-05 Score=69.04 Aligned_cols=77 Identities=25% Similarity=0.392 Sum_probs=62.9
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC---C----CCCc
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA---P----SLQG 256 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~---~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~---~----~~~~ 256 (342)
+++|+.++|.+||.|+.+..+++. ..+|+|+|.|+.+++.|+ ++ . .++++++++++.++. + .+++
T Consensus 55 i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL--~--~~Rv~lv~~nF~~l~~~L~~~g~~~~v 129 (347)
T 3tka_A 55 IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI--D--DPRFSIIHGPFSALGEYVAERDLIGKI 129 (347)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC--C--CTTEEEEESCGGGHHHHHHHTTCTTCE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh--c--CCcEEEEeCCHHHHHHHHHhcCCCCcc
Confidence 357889999999999999999876 469999999999999984 44 2 358999999988763 1 1269
Q ss_pred cEEEEcCCCCCC
Q psy15742 257 DVVFLSPPWGGP 268 (342)
Q Consensus 257 D~Ii~nPP~~~~ 268 (342)
|.|+.|..++..
T Consensus 130 DgILfDLGVSS~ 141 (347)
T 3tka_A 130 DGILLDLGVSSP 141 (347)
T ss_dssp EEEEEECSCCHH
T ss_pred cEEEECCccCHH
Confidence 999999888753
No 294
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=97.77 E-value=9.5e-05 Score=67.25 Aligned_cols=78 Identities=12% Similarity=0.074 Sum_probs=62.7
Q ss_pred CCCeEEeccCCCcHHHHHHHHhCCE---EEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----CCCccEEE
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAVCQK---VISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----SLQGDVVF 260 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~~~~---v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----~~~~D~Ii 260 (342)
.+.+++|++||.|++++.+.+.|.+ |.++|+++.+++..+.|.. ...++.+|+.++.. ...+|+++
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~------~~~~~~~DI~~i~~~~i~~~~~~Dll~ 88 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ------GKIMYVGDVRSVTQKHIQEWGPFDLVI 88 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT------TCEEEECCGGGCCHHHHHHTCCCSEEE
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC------CCceeCCChHHccHHHhcccCCcCEEE
Confidence 3568999999999999999888755 4899999999988888752 34678899988752 13699999
Q ss_pred EcCCCCCCcccc
Q psy15742 261 LSPPWGGPEYAR 272 (342)
Q Consensus 261 ~nPP~~~~~~~~ 272 (342)
..||+.+.+..+
T Consensus 89 ggpPCQ~fS~ag 100 (295)
T 2qrv_A 89 GGSPCNDLSIVN 100 (295)
T ss_dssp ECCCCGGGBTTC
T ss_pred ecCCCccccccC
Confidence 999998765543
No 295
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=97.76 E-value=4e-05 Score=70.74 Aligned_cols=74 Identities=19% Similarity=0.286 Sum_probs=60.6
Q ss_pred eEEeccCCCcHHHHHHHHhCCE-EEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCC--CCccEEEEcCCCCCC
Q psy15742 192 VVIDGFCGCGGNTIQFAAVCQK-VISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPS--LQGDVVFLSPPWGGP 268 (342)
Q Consensus 192 ~vLDlgcGtG~~~~~~a~~~~~-v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~--~~~D~Ii~nPP~~~~ 268 (342)
+|+|++||.|++++.+.+.|.+ +.++|+++.+++.-+.|. ...++.+|+.++... ...|+++..||+.+.
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~-------~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~f 74 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNH-------SAKLIKGDISKISSDEFPKCDGIIGGPPSQSW 74 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHC-------CSEEEESCGGGCCGGGSCCCSEEECCCCGGGT
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHC-------CCCcccCChhhCCHhhCCcccEEEecCCCCCc
Confidence 6999999999999999887665 469999999999888885 236789999887532 379999999999876
Q ss_pred cccc
Q psy15742 269 EYAR 272 (342)
Q Consensus 269 ~~~~ 272 (342)
+..+
T Consensus 75 S~ag 78 (331)
T 3ubt_Y 75 SEGG 78 (331)
T ss_dssp EETT
T ss_pred CCCC
Confidence 6544
No 296
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.74 E-value=0.00012 Score=68.25 Aligned_cols=75 Identities=11% Similarity=0.083 Sum_probs=60.4
Q ss_pred CCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC------CCCC------
Q psy15742 190 SDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA------PSLQ------ 255 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~------~~~~------ 255 (342)
+..|||+|.|.|.++..++.. +.+|+++|+|+..+...++.. . .++++++++|++++. ....
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~---~~~l~ii~~D~l~~~~~~~l~~~~~l~~~~~ 134 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E---GSPLQILKRDPYDWSTYSNLIDEERIFVPEV 134 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T---TSSCEEECSCTTCHHHHHHHTTTTCSSCCCC
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c---CCCEEEEECCccchhhHHHhhcccccccccc
Confidence 578999999999999999986 679999999999999988876 2 258999999998763 1110
Q ss_pred -----c---cEEEEcCCCCCC
Q psy15742 256 -----G---DVVFLSPPWGGP 268 (342)
Q Consensus 256 -----~---D~Ii~nPP~~~~ 268 (342)
+ =.|+.|-||...
T Consensus 135 ~~~~~~~~~~~vvaNLPYnIs 155 (353)
T 1i4w_A 135 QSSDHINDKFLTVANVTGEGS 155 (353)
T ss_dssp CCTTSEEEEEEEEEECCSTTH
T ss_pred cccccCCCceEEEEECCCchH
Confidence 1 178999999654
No 297
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=97.72 E-value=7.8e-05 Score=68.65 Aligned_cols=61 Identities=18% Similarity=0.198 Sum_probs=49.2
Q ss_pred CHHHHHHHHHH-hcCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCH---HHHHHHHHHHHHcC
Q psy15742 175 TPEKVAQHIAS-RCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDP---AKLRLAQHNASVYG 235 (342)
Q Consensus 175 ~~e~~~~~i~~-~~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~---~~l~~a~~n~~~~g 235 (342)
-|..+++.+.. ..++|+.|||++||+|+.++.+.+.+.+.+|+|+++ .+++.|+++++..|
T Consensus 227 kp~~l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 227 KPAAVIERLVRALSHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp CCHHHHHHHHHHHSCTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCHHHHHHHHHHhCCCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 34556565554 456899999999999999999999999999999999 99999999987655
No 298
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.69 E-value=2.9e-05 Score=69.27 Aligned_cols=75 Identities=23% Similarity=0.210 Sum_probs=54.5
Q ss_pred CCCeEEeccCCCcHHHHHHHHh-------C-------CEEEEEeCCH---HHHH-----------HHHHHHHHc------
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV-------C-------QKVISIDIDP---AKLR-----------LAQHNASVY------ 234 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~-------~-------~~v~gvD~s~---~~l~-----------~a~~n~~~~------ 234 (342)
++.+|||+|+|+|..++.+++. . .+++++|..+ +.+. .|+.+++.+
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 3568999999999998886543 1 4899999876 4444 677776642
Q ss_pred ----CCC---CcEEEEEccccccCCC------CCccEEEEcC
Q psy15742 235 ----GVS---HKIQFIQGDFFALAPS------LQGDVVFLSP 263 (342)
Q Consensus 235 ----gl~---~~i~~~~~D~~~~~~~------~~~D~Ii~nP 263 (342)
.+. .+++++.+|+.+..+. ..||+|+.||
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~ 181 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDG 181 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECS
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECC
Confidence 111 3678999999885432 2799999997
No 299
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.69 E-value=7.5e-05 Score=68.96 Aligned_cols=72 Identities=22% Similarity=0.295 Sum_probs=58.4
Q ss_pred CCeEEeccCCCcHHHHHHHHhC---CEE-EEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC----CCCccEEEE
Q psy15742 190 SDVVIDGFCGCGGNTIQFAAVC---QKV-ISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP----SLQGDVVFL 261 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~~~---~~v-~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~----~~~~D~Ii~ 261 (342)
.-+++|++||.|+++..+.+.| ..| .++|+++.+++..+.|.. .. ++++|+.++.. ...+|+++.
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~------~~-~~~~DI~~~~~~~i~~~~~Dil~g 82 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFK------EE-VQVKNLDSISIKQIESLNCNTWFM 82 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHC------CC-CBCCCTTTCCHHHHHHTCCCEEEE
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCC------CC-cccCChhhcCHHHhccCCCCEEEe
Confidence 4589999999999999998876 356 699999999999999973 11 56788887642 226899999
Q ss_pred cCCCCCC
Q psy15742 262 SPPWGGP 268 (342)
Q Consensus 262 nPP~~~~ 268 (342)
.||+.+-
T Consensus 83 gpPCQ~f 89 (327)
T 3qv2_A 83 SPPCQPY 89 (327)
T ss_dssp CCCCTTC
T ss_pred cCCccCc
Confidence 9998876
No 300
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.68 E-value=2e-05 Score=65.66 Aligned_cols=63 Identities=10% Similarity=-0.031 Sum_probs=50.5
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC----CCCCccEEEEc
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA----PSLQGDVVFLS 262 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~----~~~~~D~Ii~n 262 (342)
+++|.+|||+|||+ +++|+|+.|++.|+++.. .+++++++|+.+++ ++++||+|+++
T Consensus 10 ~~~g~~vL~~~~g~--------------v~vD~s~~ml~~a~~~~~-----~~~~~~~~d~~~~~~~~~~~~~fD~V~~~ 70 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS--------------SPVEALKGLVDKLQALTG-----NEGRVSVENIKQLLQSAHKESSFDIILSG 70 (176)
T ss_dssp CCTTSEEEEEECTT--------------SCHHHHHHHHHHHHHHTT-----TTSEEEEEEGGGGGGGCCCSSCEEEEEEC
T ss_pred CCCCCEEEEecCCc--------------eeeeCCHHHHHHHHHhcc-----cCcEEEEechhcCccccCCCCCEeEEEEC
Confidence 46789999999996 249999999999998864 24889999998875 35689999997
Q ss_pred CCCCCC
Q psy15742 263 PPWGGP 268 (342)
Q Consensus 263 PP~~~~ 268 (342)
-..+..
T Consensus 71 ~~l~~~ 76 (176)
T 2ld4_A 71 LVPGST 76 (176)
T ss_dssp CSTTCC
T ss_pred Chhhhc
Confidence 555543
No 301
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.67 E-value=4.7e-05 Score=71.22 Aligned_cols=76 Identities=14% Similarity=0.070 Sum_probs=61.8
Q ss_pred CCCeEEeccCCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHc--C-C----CCcEEEEEccccccCC-----CCC
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVY--G-V----SHKIQFIQGDFFALAP-----SLQ 255 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~--g-l----~~~i~~~~~D~~~~~~-----~~~ 255 (342)
++++||=+|.|.|+.+.++.+. ..+|+.||+|+..+++|++.+... + + .++++++.+|+.++.. ..+
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 4679999999999999999886 678999999999999999876321 1 1 1358999999988762 357
Q ss_pred ccEEEEcCC
Q psy15742 256 GDVVFLSPP 264 (342)
Q Consensus 256 ~D~Ii~nPP 264 (342)
||+|++|.+
T Consensus 285 yDvIIvDl~ 293 (381)
T 3c6k_A 285 FDYVINDLT 293 (381)
T ss_dssp EEEEEEECC
T ss_pred eeEEEECCC
Confidence 999999955
No 302
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.54 E-value=0.00012 Score=65.45 Aligned_cols=75 Identities=21% Similarity=0.197 Sum_probs=52.5
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEc-cccccCCCCCccEEEEcC
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQG-DFFALAPSLQGDVVFLSP 263 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~-D~~~~~~~~~~D~Ii~nP 263 (342)
++++.+|+|+||++|+++.+++.. +..|+|+|+-..--+.= ...+..+- +-+.+..+ |+....+ .++|+|+||-
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~w-~lV~~~~~~Dv~~l~~-~~~D~ivcDi 168 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYGW-NIVTMKSGVDVFYRPS-ECCDTLLCDI 168 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTTG-GGEEEECSCCTTSSCC-CCCSEEEECC
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcCC-cceEEEeccCHhhCCC-CCCCEEEEEC
Confidence 567889999999999999988876 45799999976411000 00001111 24788888 8877665 5799999997
Q ss_pred C
Q psy15742 264 P 264 (342)
Q Consensus 264 P 264 (342)
-
T Consensus 169 g 169 (321)
T 3lkz_A 169 G 169 (321)
T ss_dssp C
T ss_pred c
Confidence 7
No 303
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.52 E-value=0.00011 Score=63.70 Aligned_cols=74 Identities=24% Similarity=0.314 Sum_probs=54.0
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEc-cccccCCCCCccEEEEcC
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQG-DFFALAPSLQGDVVFLSP 263 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~-D~~~~~~~~~~D~Ii~nP 263 (342)
++++.+|+|+||++|+++..++.. +.+|+|+|+-..--+.- ...+.+|- +.++|..+ |++...+ .++|+|+||-
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P-~~~~s~gw-n~v~fk~gvDv~~~~~-~~~DtllcDI 152 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP-VPMSTYGW-NIVKLMSGKDVFYLPP-EKCDTLLCDI 152 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC-CCCCCTTT-TSEEEECSCCGGGCCC-CCCSEEEECC
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc-chhhhcCc-CceEEEeccceeecCC-ccccEEEEec
Confidence 467889999999999999988876 46799999876422100 00122343 47999999 9876655 6799999994
No 304
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=97.21 E-value=0.00041 Score=67.21 Aligned_cols=80 Identities=19% Similarity=0.201 Sum_probs=59.7
Q ss_pred CCeEEeccCCCcHHHHHHHHhCCE-EEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC----------------
Q psy15742 190 SDVVIDGFCGCGGNTIQFAAVCQK-VISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP---------------- 252 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~~~~~-v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~---------------- 252 (342)
.-+++|+|||.|++++.+.+.|.+ |.++|+++.+++.-+.|... .+...++++|+.++..
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~---~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~ 164 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYC---DPATHHFNEDIRDITLSHQEGVSDEAAAEHIR 164 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCC---CTTTCEEESCTHHHHCTTCTTSCHHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhccc---CCCcceeccchhhhhhccccccchhhHHhhhh
Confidence 358999999999999999877655 78999999999888888621 1234577889877641
Q ss_pred --CCCccEEEEcCCCCCCcccc
Q psy15742 253 --SLQGDVVFLSPPWGGPEYAR 272 (342)
Q Consensus 253 --~~~~D~Ii~nPP~~~~~~~~ 272 (342)
...+|+++..||+.+.+..+
T Consensus 165 ~~~~~~Dvl~gGpPCQ~FS~AG 186 (482)
T 3me5_A 165 QHIPEHDVLLAGFPCQPFSLAG 186 (482)
T ss_dssp HHSCCCSEEEEECCCCCC----
T ss_pred hcCCCCCEEEecCCCcchhhhC
Confidence 13689999999998765443
No 305
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.03 E-value=0.00011 Score=65.61 Aligned_cols=75 Identities=19% Similarity=0.121 Sum_probs=46.1
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEcccccc-CCCCCccEEEEcC
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL-APSLQGDVVFLSP 263 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~-~~~~~~D~Ii~nP 263 (342)
++++.+|||+|||+|+++..+++. ...++|+|+...+...... ....|. ++..+.+++... .+..+||+|++|-
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~-~~~~g~--~ii~~~~~~dv~~l~~~~~DlVlsD~ 148 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMN-VQSLGW--NIITFKDKTDIHRLEPVKCDTLLCDI 148 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCC-CCBTTG--GGEEEECSCCTTTSCCCCCSEEEECC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccc-cCcCCC--CeEEEeccceehhcCCCCccEEEecC
Confidence 456889999999999999998865 4578888887432100000 000111 344455554221 2446899999985
Q ss_pred C
Q psy15742 264 P 264 (342)
Q Consensus 264 P 264 (342)
.
T Consensus 149 a 149 (277)
T 3evf_A 149 G 149 (277)
T ss_dssp C
T ss_pred c
Confidence 3
No 306
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.02 E-value=0.00017 Score=64.40 Aligned_cols=74 Identities=20% Similarity=0.342 Sum_probs=47.2
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEc--cccccCCCCCccEEEEc
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQG--DFFALAPSLQGDVVFLS 262 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~--D~~~~~~~~~~D~Ii~n 262 (342)
++++.+|||+|||.|+++..+++. ..+|+|+|+...+...+... ...+. ++..... |+..+ +..++|+|+||
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~g~--~ii~~~~~~dv~~l-~~~~~DvVLSD 163 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTLGW--NLIRFKDKTDVFNM-EVIPGDTLLCD 163 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTTG--GGEEEECSCCGGGS-CCCCCSEEEEC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccCCC--ceEEeeCCcchhhc-CCCCcCEEEec
Confidence 467889999999999999998864 45789999976432211110 00121 3333332 54443 44689999999
Q ss_pred CC
Q psy15742 263 PP 264 (342)
Q Consensus 263 PP 264 (342)
-.
T Consensus 164 mA 165 (282)
T 3gcz_A 164 IG 165 (282)
T ss_dssp CC
T ss_pred Cc
Confidence 44
No 307
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.75 E-value=0.00022 Score=62.70 Aligned_cols=72 Identities=22% Similarity=0.252 Sum_probs=45.2
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHH--cCCCCcEEEEEc-cccccCCCCCccEEEE
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASV--YGVSHKIQFIQG-DFFALAPSLQGDVVFL 261 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~--~gl~~~i~~~~~-D~~~~~~~~~~D~Ii~ 261 (342)
++++.+|+|+||+.|+.+..+++. ...|.|.++.... .. .-+.. .|+ +-++|.++ |+++.. ..++|+|+|
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~~--~P~~~~~~Gv-~~i~~~~G~Df~~~~-~~~~DvVLS 145 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-HE--EPMLMQSYGW-NIVTMKSGVDVFYKP-SEISDTLLC 145 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-SC--CCCCCCSTTG-GGEEEECSCCGGGSC-CCCCSEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-cc--CCCcccCCCc-eEEEeeccCCccCCC-CCCCCEEEe
Confidence 578999999999999999999986 3244444443220 00 00000 121 12356657 998853 447999999
Q ss_pred cC
Q psy15742 262 SP 263 (342)
Q Consensus 262 nP 263 (342)
|-
T Consensus 146 DM 147 (269)
T 2px2_A 146 DI 147 (269)
T ss_dssp CC
T ss_pred CC
Confidence 94
No 308
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=96.64 E-value=0.0041 Score=65.21 Aligned_cols=77 Identities=18% Similarity=0.202 Sum_probs=59.3
Q ss_pred CCeEEeccCCCcHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEcccccc-----------------
Q psy15742 190 SDVVIDGFCGCGGNTIQFAAVCQ--KVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL----------------- 250 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~~~~--~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~----------------- 250 (342)
.-+++|+|||.|++++.+.+.|. .+.++|+++.+.+.-+.|.. +..++.+|+.++
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p------~~~~~~~DI~~l~~~~~~~di~~~~~~~l 613 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNP------GSTVFTEDCNILLKLVMAGETTNSRGQRL 613 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCT------TSEEECSCHHHHHHHHHHTCSBCTTCCBC
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC------CCccccccHHHHhhhccchhhhhhhhhhc
Confidence 34799999999999999988886 57899999999998888852 455666665332
Q ss_pred CCCCCccEEEEcCCCCCCcccc
Q psy15742 251 APSLQGDVVFLSPPWGGPEYAR 272 (342)
Q Consensus 251 ~~~~~~D~Ii~nPP~~~~~~~~ 272 (342)
+..+.+|+|+..||+.+.+..+
T Consensus 614 p~~~~vDll~GGpPCQ~FS~ag 635 (1002)
T 3swr_A 614 PQKGDVEMLCGGPPCQGFSGMN 635 (1002)
T ss_dssp CCTTTCSEEEECCCCTTCCSSS
T ss_pred ccCCCeeEEEEcCCCcchhhhC
Confidence 1234799999999998765443
No 309
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=96.58 E-value=0.0047 Score=63.63 Aligned_cols=42 Identities=17% Similarity=0.363 Sum_probs=35.7
Q ss_pred CCeEEeccCCCcHHHHHHHHhC-------CEEEEEeCCHHHHHHHHHHH
Q psy15742 190 SDVVIDGFCGCGGNTIQFAAVC-------QKVISIDIDPAKLRLAQHNA 231 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~~~-------~~v~gvD~s~~~l~~a~~n~ 231 (342)
..+|+|+|||.|+++.-+.+.| .-+.++|+++.+++.-+.|.
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 3479999999999998887654 35789999999999988885
No 310
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.47 E-value=0.0071 Score=57.44 Aligned_cols=61 Identities=15% Similarity=0.073 Sum_probs=50.1
Q ss_pred CCCCeEEeccCCCcHHHHHHH-Hh-C--CEEEEEeCCHHHHHHHHHHHHH--cC-CCCcEEEEEcccc
Q psy15742 188 KASDVVIDGFCGCGGNTIQFA-AV-C--QKVISIDIDPAKLRLAQHNASV--YG-VSHKIQFIQGDFF 248 (342)
Q Consensus 188 ~~~~~vLDlgcGtG~~~~~~a-~~-~--~~v~gvD~s~~~l~~a~~n~~~--~g-l~~~i~~~~~D~~ 248 (342)
+++..|+|+||+.|..++.++ +. + .+|+++|.+|...+..++|++. |+ .++++++++.-+-
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 578899999999999999988 43 2 6999999999999999999998 43 3257877765443
No 311
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=96.24 E-value=0.019 Score=54.22 Aligned_cols=82 Identities=11% Similarity=-0.007 Sum_probs=58.4
Q ss_pred CeEEeccCCCcHHHHHHHHhC---CE----EEEEeCCHHHHHHHHHHHHHcCCC--CcE---------------------
Q psy15742 191 DVVIDGFCGCGGNTIQFAAVC---QK----VISIDIDPAKLRLAQHNASVYGVS--HKI--------------------- 240 (342)
Q Consensus 191 ~~vLDlgcGtG~~~~~~a~~~---~~----v~gvD~s~~~l~~a~~n~~~~gl~--~~i--------------------- 240 (342)
-+|+|+|||.|+++..+.+.| .- |.++|+++.+++.-+.|....... +.+
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~~~~~~~~~~~~~l~~~s~d~k~~~~~~~i~ 90 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSKNFNPKIERLDRDILSISNDSKMPISEYGIK 90 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCSSCCCCCBCCCTTCCCCBSSSSSCCCHHHHH
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCCCcccchhhhhhhhhhccccccccccccccc
Confidence 489999999999999987765 23 888999999999988887532100 000
Q ss_pred --------EE---------EEccccccCCC---CCccEEEEcCCCCCCcccc
Q psy15742 241 --------QF---------IQGDFFALAPS---LQGDVVFLSPPWGGPEYAR 272 (342)
Q Consensus 241 --------~~---------~~~D~~~~~~~---~~~D~Ii~nPP~~~~~~~~ 272 (342)
.+ ..+|+.++... ..+|+++..||+.+.+..+
T Consensus 91 ~l~~~~l~~i~~~~~~~~~~~~DI~~i~~~~ip~~vDll~ggpPCQ~fS~ag 142 (403)
T 4dkj_A 91 KINNTIKASYLNYAKKHFNNLFDIKKVNKDNFPKNIDIFTYSFPCQDLSVQG 142 (403)
T ss_dssp HHTTBHHHHHHHHHHHHSCBCCCGGGCCTTTSCSSCSEEEECCCCTTTCTTS
T ss_pred cccHHHHHHHHhhcccCCCcccchhhcCHhhCCCCCcEEEEeCCCCCHHHhC
Confidence 00 34777776422 2479999999998776544
No 312
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=95.95 E-value=0.017 Score=62.14 Aligned_cols=77 Identities=18% Similarity=0.211 Sum_probs=58.9
Q ss_pred CCeEEeccCCCcHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEcccccc-----------------
Q psy15742 190 SDVVIDGFCGCGGNTIQFAAVCQ--KVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL----------------- 250 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~~~~--~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~----------------- 250 (342)
..+++|+|||.|++++.+.+.|. .+.++|+++.+++.-+.|.. ...++.+|+.++
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p------~~~~~~~DI~~l~~~~~~gdi~~~~~~~l 924 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNP------GTTVFTEDCNVLLKLVMAGEVTNSLGQRL 924 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCT------TSEEECSCHHHHHHHHTTTCSBCSSCCBC
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC------CCcEeeccHHHHhHhhhccchhhhhhhhc
Confidence 45799999999999999988875 47899999999998888852 345666665421
Q ss_pred CCCCCccEEEEcCCCCCCcccc
Q psy15742 251 APSLQGDVVFLSPPWGGPEYAR 272 (342)
Q Consensus 251 ~~~~~~D~Ii~nPP~~~~~~~~ 272 (342)
+..+.+|+|+.-||+.+.+..+
T Consensus 925 p~~~~vDvl~GGpPCQ~FS~ag 946 (1330)
T 3av4_A 925 PQKGDVEMLCGGPPCQGFSGMN 946 (1330)
T ss_dssp CCTTTCSEEEECCCCTTTCSSS
T ss_pred cccCccceEEecCCCccccccc
Confidence 1224689999999999876444
No 313
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=95.48 E-value=0.018 Score=51.58 Aligned_cols=69 Identities=12% Similarity=0.027 Sum_probs=46.5
Q ss_pred cCCCCeEEeccC------CCcHHHHHHHH-hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEE
Q psy15742 187 CKASDVVIDGFC------GCGGNTIQFAA-VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVV 259 (342)
Q Consensus 187 ~~~~~~vLDlgc------GtG~~~~~~a~-~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~I 259 (342)
++.|.+|||+|+ -.|+..+.-.. .|..|+++|+.+-.. . .+ .++++|+.......+||+|
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~s-----------d-a~-~~IqGD~~~~~~~~k~DLV 173 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVS-----------D-AD-STLIGDCATVHTANKWDLI 173 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBC-----------S-SS-EEEESCGGGEEESSCEEEE
T ss_pred ecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccccc-----------C-CC-eEEEccccccccCCCCCEE
Confidence 356899999996 56773222111 245999999987321 1 13 4599998877666789999
Q ss_pred EEc--CCCCCC
Q psy15742 260 FLS--PPWGGP 268 (342)
Q Consensus 260 i~n--PP~~~~ 268 (342)
++| |+-.|.
T Consensus 174 ISDMAPNtTG~ 184 (344)
T 3r24_A 174 ISDMYDPRTKH 184 (344)
T ss_dssp EECCCCTTSCS
T ss_pred EecCCCCcCCc
Confidence 999 554443
No 314
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=93.73 E-value=0.048 Score=48.91 Aligned_cols=75 Identities=20% Similarity=0.274 Sum_probs=45.6
Q ss_pred cCCCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEc-cccccCCCCCccEEEEcC
Q psy15742 187 CKASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQG-DFFALAPSLQGDVVFLSP 263 (342)
Q Consensus 187 ~~~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~-D~~~~~~~~~~D~Ii~nP 263 (342)
++++.+|||+||++|+++..+++. ...|+|+|+...+...... ....+. +-+.+..+ |+..+ ....+|+|++|-
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~~-~iv~~~~~~di~~l-~~~~~DlVlsD~ 155 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLGW-NIVKFKDKSNVFTM-PTEPSDTLLCDI 155 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCTTTS-CCCCCSEEEECC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccCC-ceEEeecCceeeec-CCCCcCEEeecC
Confidence 467899999999999999999974 4578999997532100000 000011 11223222 44433 345899999994
Q ss_pred C
Q psy15742 264 P 264 (342)
Q Consensus 264 P 264 (342)
.
T Consensus 156 A 156 (300)
T 3eld_A 156 G 156 (300)
T ss_dssp C
T ss_pred c
Confidence 3
No 315
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=92.93 E-value=0.37 Score=44.88 Aligned_cols=80 Identities=15% Similarity=0.144 Sum_probs=45.0
Q ss_pred CCeEEeccCCCcHHHHHHHHh-----------------CCEEEEEeCCHHHHHHHHHHHHHcC-----------CCCcEE
Q psy15742 190 SDVVIDGFCGCGGNTIQFAAV-----------------CQKVISIDIDPAKLRLAQHNASVYG-----------VSHKIQ 241 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~~-----------------~~~v~gvD~s~~~l~~a~~n~~~~g-----------l~~~i~ 241 (342)
+.+|+|+|||+|.+++.++.. ..+|+..|+-.......=+.+.... ...+.-
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 568999999999999988432 1355666654444333222222110 000111
Q ss_pred EEE---ccccc-cCCCCCccEEEEcCCCCCCc
Q psy15742 242 FIQ---GDFFA-LAPSLQGDVVFLSPPWGGPE 269 (342)
Q Consensus 242 ~~~---~D~~~-~~~~~~~D~Ii~nPP~~~~~ 269 (342)
|+. +.+.. ..++.++|+|+++-..+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls 164 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLS 164 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCS
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeec
Confidence 222 22222 23667999999998877765
No 316
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.84 E-value=0.047 Score=49.24 Aligned_cols=31 Identities=23% Similarity=0.248 Sum_probs=25.2
Q ss_pred CcEEEEEccccccC---CCCCccEEEEcCCCCCC
Q psy15742 238 HKIQFIQGDFFALA---PSLQGDVVFLSPPWGGP 268 (342)
Q Consensus 238 ~~i~~~~~D~~~~~---~~~~~D~Ii~nPP~~~~ 268 (342)
.+++++++|+.+.+ ++++||+|++||||...
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~ 53 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTL 53 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCc
Confidence 36899999998854 45689999999999754
No 317
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=92.60 E-value=0.65 Score=43.39 Aligned_cols=78 Identities=15% Similarity=-0.056 Sum_probs=49.8
Q ss_pred CCeEEeccCCCcHHHHHHHHh-------------------CCEEEEEeCC-----------HHHHHHHHHHHHHcCCCCc
Q psy15742 190 SDVVIDGFCGCGGNTIQFAAV-------------------CQKVISIDID-----------PAKLRLAQHNASVYGVSHK 239 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~~-------------------~~~v~gvD~s-----------~~~l~~a~~n~~~~gl~~~ 239 (342)
.-+|+|+||++|.+++.+... ...|+..|+- +...+.++. ..|-..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~---~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK---ENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH---HTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh---hccCCCC
Confidence 468999999999999988654 1357788876 444443322 1232112
Q ss_pred EEEEEccccc---c-CCCCCccEEEEcCCCCCCcc
Q psy15742 240 IQFIQGDFFA---L-APSLQGDVVFLSPPWGGPEY 270 (342)
Q Consensus 240 i~~~~~D~~~---~-~~~~~~D~Ii~nPP~~~~~~ 270 (342)
.-|+.+.... - .++.++|+|+++-..+..+.
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~ 164 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQ 164 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSS
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCC
Confidence 3465554433 2 36789999999977776543
No 318
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.48 E-value=0.45 Score=37.14 Aligned_cols=65 Identities=12% Similarity=0.042 Sum_probs=45.6
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----CCCCccEEE
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----PSLQGDVVF 260 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----~~~~~D~Ii 260 (342)
..+++=+|| |.++..+++ .|.+|+++|.+++.++.++. . .+.++.+|..+.. .-..+|+|+
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~----~~~~~~gd~~~~~~l~~~~~~~~d~vi 75 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E----GFDAVIADPTDESFYRSLDLEGVSAVL 75 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T----TCEEEECCTTCHHHHHHSCCTTCSEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C----CCcEEECCCCCHHHHHhCCcccCCEEE
Confidence 346777777 455555544 48999999999988776654 2 3567888887542 224689999
Q ss_pred EcCC
Q psy15742 261 LSPP 264 (342)
Q Consensus 261 ~nPP 264 (342)
...|
T Consensus 76 ~~~~ 79 (141)
T 3llv_A 76 ITGS 79 (141)
T ss_dssp ECCS
T ss_pred EecC
Confidence 8777
No 319
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=90.94 E-value=0.12 Score=47.18 Aligned_cols=31 Identities=26% Similarity=0.348 Sum_probs=25.6
Q ss_pred CcEEEEEccccccC---CCCCccEEEEcCCCCCC
Q psy15742 238 HKIQFIQGDFFALA---PSLQGDVVFLSPPWGGP 268 (342)
Q Consensus 238 ~~i~~~~~D~~~~~---~~~~~D~Ii~nPP~~~~ 268 (342)
++..++++|+.+.+ +++++|+|++||||...
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~ 46 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQ 46 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSS
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCC
Confidence 46889999998643 56789999999999765
No 320
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=90.63 E-value=0.98 Score=39.62 Aligned_cols=72 Identities=18% Similarity=0.137 Sum_probs=55.0
Q ss_pred CCeEEeccCCCcH---HHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCCC
Q psy15742 190 SDVVIDGFCGCGG---NTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSLQ 255 (342)
Q Consensus 190 ~~~vLDlgcGtG~---~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~~ 255 (342)
|+.+|=-|++.|. .+..+|+.|.+|+.+|.+++.++.+.+.++..|. ++.++.+|+.+.. .-++
T Consensus 7 gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~--~~~~~~~Dvt~~~~v~~~~~~~~~~~G~ 84 (254)
T 4fn4_A 7 NKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK--EVLGVKADVSKKKDVEEFVRRTFETYSR 84 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 6677777766654 3444555699999999999999998888887774 7899999998652 1247
Q ss_pred ccEEEEcC
Q psy15742 256 GDVVFLSP 263 (342)
Q Consensus 256 ~D~Ii~nP 263 (342)
.|++|.|-
T Consensus 85 iDiLVNNA 92 (254)
T 4fn4_A 85 IDVLCNNA 92 (254)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 89999875
No 321
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.62 E-value=0.44 Score=37.39 Aligned_cols=65 Identities=8% Similarity=0.015 Sum_probs=44.3
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----CCCCccEEE
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----PSLQGDVVF 260 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----~~~~~D~Ii 260 (342)
..+|+=+||| .++..+++ .|..|+++|.+++.++.++. . .+.++.+|..+.. .-..+|+|+
T Consensus 7 ~~~viIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~----g~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (140)
T 3fwz_A 7 CNHALLVGYG--RVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R----GVRAVLGNAANEEIMQLAHLECAKWLI 76 (140)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T----TCEEEESCTTSHHHHHHTTGGGCSEEE
T ss_pred CCCEEEECcC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c----CCCEEECCCCCHHHHHhcCcccCCEEE
Confidence 3467777764 45544443 48999999999998877664 2 3567889886531 123689998
Q ss_pred EcCC
Q psy15742 261 LSPP 264 (342)
Q Consensus 261 ~nPP 264 (342)
+--|
T Consensus 77 ~~~~ 80 (140)
T 3fwz_A 77 LTIP 80 (140)
T ss_dssp ECCS
T ss_pred EECC
Confidence 7655
No 322
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=89.99 E-value=0.09 Score=46.40 Aligned_cols=30 Identities=13% Similarity=0.231 Sum_probs=23.7
Q ss_pred cEEEEEccccccC---CCCCccEEEEcCCCCCC
Q psy15742 239 KIQFIQGDFFALA---PSLQGDVVFLSPPWGGP 268 (342)
Q Consensus 239 ~i~~~~~D~~~~~---~~~~~D~Ii~nPP~~~~ 268 (342)
..+++++|+.+.+ +.+++|+|++||||...
T Consensus 4 ~~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~ 36 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVENKSVQLAVIDPPYNLS 36 (260)
T ss_dssp SSSEEECCHHHHHHHSCTTCEEEEEECCCCSSC
T ss_pred cCeEEechHHHHHHhccccccCEEEECCCCCCC
Confidence 3568899987653 55689999999999754
No 323
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=89.17 E-value=1.3 Score=38.83 Aligned_cols=74 Identities=15% Similarity=0.040 Sum_probs=54.7
Q ss_pred CCeEEeccCCCcH---HHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCCC
Q psy15742 190 SDVVIDGFCGCGG---NTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSLQ 255 (342)
Q Consensus 190 ~~~vLDlgcGtG~---~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~~ 255 (342)
|+++|=-|++.|. .+..+++.|.+|+..|.+++.++.+.+.+...|. ++.++.+|+.+.. .-++
T Consensus 9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~--~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 86 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY--DAHGVAFDVTDELAIEAAFSKLDAEGIH 86 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC--CEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 6667766655543 3444455699999999999999888888887775 7889999987642 2357
Q ss_pred ccEEEEcCCC
Q psy15742 256 GDVVFLSPPW 265 (342)
Q Consensus 256 ~D~Ii~nPP~ 265 (342)
.|++|.|--.
T Consensus 87 iDiLVNNAG~ 96 (255)
T 4g81_D 87 VDILINNAGI 96 (255)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCCC
Confidence 8999988643
No 324
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=88.77 E-value=2.9 Score=35.71 Aligned_cols=74 Identities=12% Similarity=0.061 Sum_probs=54.1
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~ 254 (342)
++++|=.| |+|+++..++ +.|.+|+.++.++...+.....++..+. ++.++.+|+.+.. ..+
T Consensus 5 ~k~vlITG-as~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 5 EKVALVTG-ASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGF--KARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 55666555 5566555554 4589999999999998888877777664 7899999987642 224
Q ss_pred CccEEEEcCCCC
Q psy15742 255 QGDVVFLSPPWG 266 (342)
Q Consensus 255 ~~D~Ii~nPP~~ 266 (342)
..|++|.|.-..
T Consensus 82 ~id~li~~Ag~~ 93 (247)
T 3lyl_A 82 AIDILVNNAGIT 93 (247)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999987544
No 325
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=88.41 E-value=0.19 Score=45.89 Aligned_cols=30 Identities=13% Similarity=0.196 Sum_probs=24.3
Q ss_pred cEEEE-EccccccC---CCCCccEEEEcCCCCCC
Q psy15742 239 KIQFI-QGDFFALA---PSLQGDVVFLSPPWGGP 268 (342)
Q Consensus 239 ~i~~~-~~D~~~~~---~~~~~D~Ii~nPP~~~~ 268 (342)
..+++ ++|+.+.+ +.+++|+|++||||...
T Consensus 38 ~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~ 71 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIM 71 (319)
T ss_dssp EEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCC
T ss_pred cceEEECCcHHHHHHhCccCCcCEEEECCCCCCC
Confidence 46788 99998753 55689999999999764
No 326
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=88.13 E-value=2.6 Score=36.64 Aligned_cols=72 Identities=15% Similarity=0.017 Sum_probs=52.7
Q ss_pred CCeEEeccCCCcH---HHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCCC
Q psy15742 190 SDVVIDGFCGCGG---NTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSLQ 255 (342)
Q Consensus 190 ~~~vLDlgcGtG~---~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~~ 255 (342)
++++|=.|++.|. ++..+++.|.+|+.++.+++.++.+.+.+...+. ++.++.+|+.+.. ..+.
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGR--RALSVGTDITDDAQVAHLVDETMKAYGR 88 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5677766665442 3334455599999999999999888887776664 7899999988752 1247
Q ss_pred ccEEEEcC
Q psy15742 256 GDVVFLSP 263 (342)
Q Consensus 256 ~D~Ii~nP 263 (342)
.|++|.|.
T Consensus 89 id~lv~nA 96 (264)
T 3ucx_A 89 VDVVINNA 96 (264)
T ss_dssp CSEEEECC
T ss_pred CcEEEECC
Confidence 89999886
No 327
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=87.81 E-value=3.2 Score=37.38 Aligned_cols=125 Identities=14% Similarity=0.018 Sum_probs=67.0
Q ss_pred CeEEeccCCCcHHHHHHHH----h--C--CEEEEEeCCH--------H-HHHHHHHHHHHcC-C-CC--cEEEEEccccc
Q psy15742 191 DVVIDGFCGCGGNTIQFAA----V--C--QKVISIDIDP--------A-KLRLAQHNASVYG-V-SH--KIQFIQGDFFA 249 (342)
Q Consensus 191 ~~vLDlgcGtG~~~~~~a~----~--~--~~v~gvD~s~--------~-~l~~a~~n~~~~g-l-~~--~i~~~~~D~~~ 249 (342)
-+|+|+|=|||.+.+.... . . .+.+++|..+ + .-+..+.-..... . .+ ..++..+|+.+
T Consensus 98 ~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~~ 177 (308)
T 3vyw_A 98 IRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDARK 177 (308)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHHH
T ss_pred cEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHHH
Confidence 4799999999997654432 1 2 3567777532 1 1112222122110 0 12 35678899877
Q ss_pred cC---CCCCccEEEEcCCCCCCccccccccccccCcCCCCchhhhHhhhccCCCceeecCCCCCHHHHH-HhhCCCcEEE
Q psy15742 250 LA---PSLQGDVVFLSPPWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYLPRTSDVFEIF-HDSGKKGSFI 325 (342)
Q Consensus 250 ~~---~~~~~D~Ii~nPP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~-~~~~~~~~i~ 325 (342)
.. +...+|+|+.|+ |.... -|.+|....+..+++...+++.+.- -+... .+. .+...||.|.
T Consensus 178 ~l~~l~~~~~Da~flDg-FsP~k-----------NPeLWs~e~f~~l~~~~~pgg~laT-Ytaag-~VRR~L~~aGF~V~ 243 (308)
T 3vyw_A 178 RIKEVENFKADAVFHDA-FSPYK-----------NPELWTLDFLSLIKERIDEKGYWVS-YSSSL-SVRKSLLTLGFKVG 243 (308)
T ss_dssp HGGGCCSCCEEEEEECC-SCTTT-----------SGGGGSHHHHHHHHTTEEEEEEEEE-SCCCH-HHHHHHHHTTCEEE
T ss_pred HHhhhcccceeEEEeCC-CCccc-----------CcccCCHHHHHHHHHHhCCCcEEEE-EeCcH-HHHHHHHHCCCEEE
Confidence 64 334799999996 44331 1222333355566666677666652 11222 222 2445677777
Q ss_pred Eecc
Q psy15742 326 SLTG 329 (342)
Q Consensus 326 ~i~~ 329 (342)
.+-+
T Consensus 244 k~~G 247 (308)
T 3vyw_A 244 SSRE 247 (308)
T ss_dssp EEEC
T ss_pred ecCC
Confidence 6654
No 328
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=87.76 E-value=0.63 Score=43.45 Aligned_cols=43 Identities=26% Similarity=0.183 Sum_probs=36.2
Q ss_pred hcCCCCeEEeccCCC-cHHHHHHHHh-CC-EEEEEeCCHHHHHHHH
Q psy15742 186 RCKASDVVIDGFCGC-GGNTIQFAAV-CQ-KVISIDIDPAKLRLAQ 228 (342)
Q Consensus 186 ~~~~~~~vLDlgcGt-G~~~~~~a~~-~~-~v~gvD~s~~~l~~a~ 228 (342)
.+++|++||-.|||. |.+++.+|+. |. +|+++|.+++.++.++
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 227 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLS 227 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 456899999999876 7788888875 76 9999999999888775
No 329
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=87.29 E-value=1.1 Score=40.97 Aligned_cols=67 Identities=18% Similarity=0.131 Sum_probs=47.0
Q ss_pred hcCCCCeEEeccCCC-cHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEc
Q psy15742 186 RCKASDVVIDGFCGC-GGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLS 262 (342)
Q Consensus 186 ~~~~~~~vLDlgcGt-G~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~n 262 (342)
.+++|++||-.|+|. |..++.+|+. |.+|+++|.+++.++.+++ .|.+ . ++ .|...+ .. .+|+|+-.
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~--~-v~-~~~~~~-~~-~~D~vid~ 241 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS----MGVK--H-FY-TDPKQC-KE-ELDFIIST 241 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH----TTCS--E-EE-SSGGGC-CS-CEEEEEEC
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh----cCCC--e-ec-CCHHHH-hc-CCCEEEEC
Confidence 456899999998864 6777777776 8899999999998887754 4542 2 22 443332 22 78988853
No 330
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=87.24 E-value=2.2 Score=38.02 Aligned_cols=74 Identities=18% Similarity=0.069 Sum_probs=54.5
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----------CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----------SL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----------~~ 254 (342)
++++|=.|++ |+++..++ +.|.+|+.++.++..++.+.+.+...+. ++.++.+|+.+... .+
T Consensus 31 gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 31 GRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF--DAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 5667766655 55555544 4589999999999999888887776664 78999999887521 13
Q ss_pred CccEEEEcCCCC
Q psy15742 255 QGDVVFLSPPWG 266 (342)
Q Consensus 255 ~~D~Ii~nPP~~ 266 (342)
..|++|.|.-..
T Consensus 108 ~id~lvnnAg~~ 119 (301)
T 3tjr_A 108 GVDVVFSNAGIV 119 (301)
T ss_dssp SCSEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 789999986554
No 331
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=86.91 E-value=0.27 Score=45.53 Aligned_cols=80 Identities=14% Similarity=0.109 Sum_probs=53.1
Q ss_pred CCeEEeccCCCcHHHHHHHHh------------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEc---ccc
Q psy15742 190 SDVVIDGFCGCGGNTIQFAAV------------------CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQG---DFF 248 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~~------------------~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~---D~~ 248 (342)
.-+|+|+||++|.+++.+... ...|+..|+-......+-+++....-..+.-|+.+ .++
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 357999999999988766433 24688999888877777766643110012244444 333
Q ss_pred cc-CCCCCccEEEEcCCCCCCc
Q psy15742 249 AL-APSLQGDVVFLSPPWGGPE 269 (342)
Q Consensus 249 ~~-~~~~~~D~Ii~nPP~~~~~ 269 (342)
.- .++.++|+|+++-..+..+
T Consensus 132 ~rlfp~~S~d~v~Ss~aLHWls 153 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSSYSLMWLS 153 (359)
T ss_dssp SCCSCTTCBSCEEEESCTTBCS
T ss_pred hccCCCCceEEEEehhhhhhcc
Confidence 33 3778999999987766654
No 332
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=86.76 E-value=2.6 Score=37.90 Aligned_cols=76 Identities=13% Similarity=-0.020 Sum_probs=54.7
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~ 254 (342)
++++|=.|++ |+++..++ +.|.+|++++.++..++.+...+...+...++.++.+|+.+.. ..+
T Consensus 8 ~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (319)
T 3ioy_A 8 GRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG 86 (319)
T ss_dssp TCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 5567766655 55555554 4589999999999998888887776654347899999987642 124
Q ss_pred CccEEEEcCCCC
Q psy15742 255 QGDVVFLSPPWG 266 (342)
Q Consensus 255 ~~D~Ii~nPP~~ 266 (342)
..|++|.|.-..
T Consensus 87 ~id~lv~nAg~~ 98 (319)
T 3ioy_A 87 PVSILCNNAGVN 98 (319)
T ss_dssp CEEEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 689999986543
No 333
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=86.70 E-value=0.24 Score=50.05 Aligned_cols=75 Identities=24% Similarity=0.230 Sum_probs=50.2
Q ss_pred CCeEEeccCCCcHHHHHHHHhC--------------CEEEEEeC---CHHHHHHHHH-----------HHHHc-----C-
Q psy15742 190 SDVVIDGFCGCGGNTIQFAAVC--------------QKVISIDI---DPAKLRLAQH-----------NASVY-----G- 235 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~~~--------------~~v~gvD~---s~~~l~~a~~-----------n~~~~-----g- 235 (342)
.-+|+|+|.|+|.+.+.+.+.. .+++++|. +.+-+..|-. -++.+ |
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 3489999999999888775531 57899998 5555543321 11211 1
Q ss_pred ----CCC---cEEEEEccccccCC------CCCccEEEEcCC
Q psy15742 236 ----VSH---KIQFIQGDFFALAP------SLQGDVVFLSPP 264 (342)
Q Consensus 236 ----l~~---~i~~~~~D~~~~~~------~~~~D~Ii~nPP 264 (342)
+++ .+++..+|+.+.++ ...+|.++.|+.
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f 180 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGF 180 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSS
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCC
Confidence 111 56788899987653 357999999974
No 334
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=86.64 E-value=1.2 Score=40.49 Aligned_cols=44 Identities=32% Similarity=0.423 Sum_probs=37.0
Q ss_pred hcCCCCeEEeccCCC-cHHHHHHHHh-CCEEEEEeCCHHHHHHHHH
Q psy15742 186 RCKASDVVIDGFCGC-GGNTIQFAAV-CQKVISIDIDPAKLRLAQH 229 (342)
Q Consensus 186 ~~~~~~~vLDlgcGt-G~~~~~~a~~-~~~v~gvD~s~~~l~~a~~ 229 (342)
.+++|++||-.|+|. |..++.+|+. |.+|+++|.+++.++.+++
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 208 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR 208 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 356789999999874 8888888886 8899999999999888754
No 335
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=86.55 E-value=1.6 Score=37.77 Aligned_cols=74 Identities=15% Similarity=-0.082 Sum_probs=53.5
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC----------CCCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA----------PSLQ 255 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~----------~~~~ 255 (342)
++++|=.|++ |+++..++ +.|.+|+.+|.++..++.+...+...+. ++.++.+|+.+.. ..+.
T Consensus 7 ~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~g~ 83 (252)
T 3h7a_A 7 NATVAVIGAG-DYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG--RIVARSLDARNEDEVTAFLNAADAHAP 83 (252)
T ss_dssp SCEEEEECCS-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC--EEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence 5566666655 55555544 4589999999999988888887776653 7899999987642 0147
Q ss_pred ccEEEEcCCCC
Q psy15742 256 GDVVFLSPPWG 266 (342)
Q Consensus 256 ~D~Ii~nPP~~ 266 (342)
.|++|.|.-..
T Consensus 84 id~lv~nAg~~ 94 (252)
T 3h7a_A 84 LEVTIFNVGAN 94 (252)
T ss_dssp EEEEEECCCCC
T ss_pred ceEEEECCCcC
Confidence 89999886543
No 336
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=86.19 E-value=1.3 Score=39.51 Aligned_cols=99 Identities=16% Similarity=0.119 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHcCCCCcEEEE--EccccccCCC-CCccEEEEcCCCCCCccccc--cccccccCcCCCCchhhhHhhh
Q psy15742 221 PAKLRLAQHNASVYGVSHKIQFI--QGDFFALAPS-LQGDVVFLSPPWGGPEYARS--SFSIDNIFPEQGGGRRLFQVAR 295 (342)
Q Consensus 221 ~~~l~~a~~n~~~~gl~~~i~~~--~~D~~~~~~~-~~~D~Ii~nPP~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 295 (342)
.+.+..+.+.++ ++++. ++|+.+.... ..=|+|++||||...+-... ...-..+... +...+.+...
T Consensus 156 ~~~l~~~~~~l~------~v~i~~~~~Df~~~i~~~~~~~fvY~DPPY~~~~~~~~f~~Y~~~~f~~~--dh~~L~~~l~ 227 (284)
T 2dpm_A 156 EELISAISVYIN------NNQLEIKVGDFEKAIVDVRTGDFVYFDPPYIPLSETSAFTSYTHEGFSFA--DQVRLRDAFK 227 (284)
T ss_dssp HHHHHHHHHHHH------HSEEEEEESCGGGGGTTCCTTCEEEECCCCCCC-----CCCCCCSSCCHH--HHHHHHHHHH
T ss_pred HHHHHHHHHHhC------CCEEEEeCCCHHHHHHhcCCCCEEEeCCCcccccCCCCccccccCCCCHH--HHHHHHHHHH
Confidence 566777776665 46677 9999988642 34589999999976321110 0100011111 2334555555
Q ss_pred ccCC-CceeecCCCCCHHHHHHhhCCCcEEEEecc
Q psy15742 296 GISP-NVGYYLPRTSDVFEIFHDSGKKGSFISLTG 329 (342)
Q Consensus 296 ~~~~-~~~~~l~~~~~~~~l~~~~~~~~~i~~i~~ 329 (342)
.+.. +.-.+++.+-+ ..+..+ ..++.+..+..
T Consensus 228 ~l~~~g~~~~lS~~d~-~~i~~l-y~~~~i~~~~~ 260 (284)
T 2dpm_A 228 RLSDTGAYVMLSNSSS-ALVEEL-YKDFNIHYVEA 260 (284)
T ss_dssp HHHTTTCEEEEEEESC-HHHHHH-TTTSEEEEEC-
T ss_pred HHHhcCCEEEEEcCCC-HHHHHH-HcCCeEEEEEe
Confidence 5543 23333333333 334444 56777776654
No 337
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=85.85 E-value=2.9 Score=31.89 Aligned_cols=66 Identities=18% Similarity=0.141 Sum_probs=41.9
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----CCCCccEEE
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----PSLQGDVVF 260 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----~~~~~D~Ii 260 (342)
+.+|+=+|+ |.++..+++ .+.+|+.+|.+++.++.++.. .+ +.++.+|..+.. .-..+|+|+
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~~----~~~~~~d~~~~~~l~~~~~~~~d~vi 74 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---ID----ALVINGDCTKIKTLEDAGIEDADMYI 74 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---CS----SEEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---cC----cEEEEcCCCCHHHHHHcCcccCCEEE
Confidence 346766665 666655544 488999999999877655432 12 456677764321 123689999
Q ss_pred EcCC
Q psy15742 261 LSPP 264 (342)
Q Consensus 261 ~nPP 264 (342)
...|
T Consensus 75 ~~~~ 78 (140)
T 1lss_A 75 AVTG 78 (140)
T ss_dssp ECCS
T ss_pred EeeC
Confidence 8766
No 338
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=85.83 E-value=2.1 Score=39.03 Aligned_cols=60 Identities=12% Similarity=0.107 Sum_probs=46.2
Q ss_pred CCCeEEeccCCCcHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHHcC--------------------CCCcEEEEEcc
Q psy15742 189 ASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLAQHNASVYG--------------------VSHKIQFIQGD 246 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a~~--~~~v~gvD~s~~~l~~a~~n~~~~g--------------------l~~~i~~~~~D 246 (342)
+...|+++|||..+....+... +..++-||. |+.++.-++.+...+ .+++..++.+|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 4568999999999999999874 456677776 888888777776642 12578899999
Q ss_pred ccc
Q psy15742 247 FFA 249 (342)
Q Consensus 247 ~~~ 249 (342)
+.+
T Consensus 176 L~d 178 (334)
T 1rjd_A 176 LND 178 (334)
T ss_dssp TTC
T ss_pred CCC
Confidence 876
No 339
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=85.53 E-value=3.3 Score=35.84 Aligned_cols=77 Identities=17% Similarity=0.182 Sum_probs=54.9
Q ss_pred CCeEEeccC-CCcH---HHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----------CC
Q psy15742 190 SDVVIDGFC-GCGG---NTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----------SL 254 (342)
Q Consensus 190 ~~~vLDlgc-GtG~---~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----------~~ 254 (342)
++++|=.|+ |.|. ++..+++.|.+|+.++.+...++.+.+.+...+- .++.++.+|+.+... .+
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 100 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGL-GRVEAVVCDVTSTEAVDALITQTVEKAG 100 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCS-SCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCC-CceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence 667777776 4443 3444555699999999999988888777765542 479999999976421 13
Q ss_pred CccEEEEcCCCCC
Q psy15742 255 QGDVVFLSPPWGG 267 (342)
Q Consensus 255 ~~D~Ii~nPP~~~ 267 (342)
..|++|.|.-...
T Consensus 101 ~id~li~~Ag~~~ 113 (266)
T 3o38_A 101 RLDVLVNNAGLGG 113 (266)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCcEEEECCCcCC
Confidence 6899999876543
No 340
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=85.52 E-value=1.2 Score=41.04 Aligned_cols=43 Identities=23% Similarity=0.313 Sum_probs=35.7
Q ss_pred cCCCCeEEeccCCC-cHHHHHHHHh-CC-EEEEEeCCHHHHHHHHH
Q psy15742 187 CKASDVVIDGFCGC-GGNTIQFAAV-CQ-KVISIDIDPAKLRLAQH 229 (342)
Q Consensus 187 ~~~~~~vLDlgcGt-G~~~~~~a~~-~~-~v~gvD~s~~~l~~a~~ 229 (342)
+++|++||-.|||. |..++.+|+. |. .|+++|.+++.++.+++
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~ 233 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ 233 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 56789999999875 7778888875 66 79999999999988864
No 341
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=85.24 E-value=4 Score=35.47 Aligned_cols=76 Identities=9% Similarity=-0.087 Sum_probs=52.9
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-------CCCCccE
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-------PSLQGDV 258 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-------~~~~~D~ 258 (342)
++++|=.|+ +|+++..++ +.|.+|+.+|.+++.++.+.+.+...+....+.++.+|+.+.. .-+..|+
T Consensus 10 ~k~~lVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 88 (267)
T 3t4x_A 10 GKTALVTGS-TAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI 88 (267)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence 556776665 455555554 4589999999999988877777766543346788899987642 1247899
Q ss_pred EEEcCCCC
Q psy15742 259 VFLSPPWG 266 (342)
Q Consensus 259 Ii~nPP~~ 266 (342)
+|.|.-..
T Consensus 89 lv~nAg~~ 96 (267)
T 3t4x_A 89 LINNLGIF 96 (267)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99886543
No 342
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=85.05 E-value=3 Score=36.65 Aligned_cols=74 Identities=12% Similarity=-0.031 Sum_probs=52.7
Q ss_pred CCeEEeccCCCcHHHHHH----HHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQF----AAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~----a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~ 254 (342)
++++|=.|++ |+++..+ ++.|.+|+.++.+++.++.+.+.+...+. ++.++.+|+.+.. ..+
T Consensus 24 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 24 PQTAFVTGVS-SGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGH--DVDGSSCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp -CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC--CEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5567766654 5555554 44589999999999988888777766553 7899999987642 113
Q ss_pred CccEEEEcCCCC
Q psy15742 255 QGDVVFLSPPWG 266 (342)
Q Consensus 255 ~~D~Ii~nPP~~ 266 (342)
..|++|.|.-..
T Consensus 101 ~id~lv~nAg~~ 112 (279)
T 3sju_A 101 PIGILVNSAGRN 112 (279)
T ss_dssp SCCEEEECCCCC
T ss_pred CCcEEEECCCCC
Confidence 789999886543
No 343
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=84.82 E-value=1.9 Score=36.33 Aligned_cols=60 Identities=22% Similarity=0.164 Sum_probs=42.5
Q ss_pred CCCcHHHHHHHHh----CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----CCCCccEEEEcCC
Q psy15742 198 CGCGGNTIQFAAV----CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----PSLQGDVVFLSPP 264 (342)
Q Consensus 198 cGtG~~~~~~a~~----~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----~~~~~D~Ii~nPP 264 (342)
||.|.++..+++. +..|+.+|.+++.++...+.. .+.++.+|..+.. .-..+|+|++--|
T Consensus 6 iG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-------~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 6 IGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-------KATIIHGDGSHKEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp ECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-------SSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred ECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-------CCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence 4568887777653 889999999999887654331 3568899987642 2246898888655
No 344
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=84.37 E-value=1.5 Score=40.21 Aligned_cols=44 Identities=20% Similarity=0.197 Sum_probs=35.7
Q ss_pred hcCCCCeEEeccCCC-cHHHHHHHHh-CC-EEEEEeCCHHHHHHHHH
Q psy15742 186 RCKASDVVIDGFCGC-GGNTIQFAAV-CQ-KVISIDIDPAKLRLAQH 229 (342)
Q Consensus 186 ~~~~~~~vLDlgcGt-G~~~~~~a~~-~~-~v~gvD~s~~~l~~a~~ 229 (342)
.+++|++||-.|+|. |..++.+|+. |. +|+++|.+++.++.+++
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 214 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE 214 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 456889999999874 7777778875 76 99999999998888763
No 345
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase-DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=84.21 E-value=1.3 Score=38.95 Aligned_cols=41 Identities=27% Similarity=0.446 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCCCCC
Q psy15742 221 PAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGGP 268 (342)
Q Consensus 221 ~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~~~~ 268 (342)
.+.+..+.+.++ ++++.+.|+.+.. ...=|+|++||||...
T Consensus 137 ~~~l~~~~~~l~------~v~i~~~Df~~~i-~~~~~fvY~DPPY~~~ 177 (259)
T 1yf3_A 137 EKRFNHFKQNCD------KIIFSSLHFKDVK-ILDGDFVYVDPPYLIT 177 (259)
T ss_dssp HHHHHHHHHHGG------GEEEECCCGGGCC-CCTTEEEEECCCCTTS
T ss_pred HHHHHHHHHHhc------CCEEEcCCHHHHh-CCCCeEEEECCCCCCc
Confidence 344555555543 7899999999987 4566899999999764
No 346
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=84.06 E-value=1.5 Score=40.81 Aligned_cols=44 Identities=25% Similarity=0.195 Sum_probs=35.9
Q ss_pred hcCCCCeEEeccCCC-cHHHHHHHHh-CC-EEEEEeCCHHHHHHHHH
Q psy15742 186 RCKASDVVIDGFCGC-GGNTIQFAAV-CQ-KVISIDIDPAKLRLAQH 229 (342)
Q Consensus 186 ~~~~~~~vLDlgcGt-G~~~~~~a~~-~~-~v~gvD~s~~~l~~a~~ 229 (342)
.+++|++||-.|||. |.+++.+|+. |. .|+++|.+++.++.+++
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH
Confidence 456889999999864 7778888876 66 79999999999888854
No 347
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=83.82 E-value=4.1 Score=35.49 Aligned_cols=73 Identities=8% Similarity=-0.001 Sum_probs=51.5
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CC-
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PS- 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~- 253 (342)
++++|=.| |+|+++..+++ .|.+|+.++.+++.++.+.+.+...+. ++.++.+|+.+.. .-
T Consensus 21 ~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 21 GTTALVTG-GSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL--NVEGSVCDLLSRTERDKLMQTVAHVFD 97 (273)
T ss_dssp TCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEC-CcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 55666655 45666665554 489999999999888776666655553 6889999987642 01
Q ss_pred CCccEEEEcCCC
Q psy15742 254 LQGDVVFLSPPW 265 (342)
Q Consensus 254 ~~~D~Ii~nPP~ 265 (342)
+..|++|.|.-.
T Consensus 98 g~id~lv~nAg~ 109 (273)
T 1ae1_A 98 GKLNILVNNAGV 109 (273)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 578999998643
No 348
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=83.80 E-value=2.8 Score=36.65 Aligned_cols=74 Identities=9% Similarity=0.080 Sum_probs=53.4
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~ 254 (342)
++++|=.| |+|+++..++ +.|.+|+.++.+++.++.+.+.+...+. ++.++.+|+.+.. ..+
T Consensus 26 gk~~lVTG-as~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 26 GRTALVTG-SSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGH--DAEAVAFDVTSESEIIEAFARLDEQGI 102 (271)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC--CEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 55666655 4555555554 4589999999999988888777776664 7889999987642 123
Q ss_pred CccEEEEcCCCC
Q psy15742 255 QGDVVFLSPPWG 266 (342)
Q Consensus 255 ~~D~Ii~nPP~~ 266 (342)
..|++|.|.-..
T Consensus 103 ~iD~lv~nAg~~ 114 (271)
T 4ibo_A 103 DVDILVNNAGIQ 114 (271)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999986543
No 349
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=83.78 E-value=5.4 Score=34.64 Aligned_cols=74 Identities=14% Similarity=0.008 Sum_probs=53.0
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~ 254 (342)
++++|=.| |+|+++..+++ .|.+|++++.++..++.....++..+. ++.++.+|+.+.. ..+
T Consensus 31 ~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~g 107 (272)
T 1yb1_A 31 GEIVLITG-AGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA--KVHTFVVDCSNREDIYSSAKKVKAEIG 107 (272)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCC--eEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 55666555 56677666654 489999999999888777776665553 7899999987642 113
Q ss_pred CccEEEEcCCCC
Q psy15742 255 QGDVVFLSPPWG 266 (342)
Q Consensus 255 ~~D~Ii~nPP~~ 266 (342)
..|++|.+.-..
T Consensus 108 ~iD~li~~Ag~~ 119 (272)
T 1yb1_A 108 DVSILVNNAGVV 119 (272)
T ss_dssp CCSEEEECCCCC
T ss_pred CCcEEEECCCcC
Confidence 689999986543
No 350
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=83.71 E-value=5 Score=34.82 Aligned_cols=74 Identities=14% Similarity=0.068 Sum_probs=52.4
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHH-cCCCCcEEEEEccccccCC-----------C
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASV-YGVSHKIQFIQGDFFALAP-----------S 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~-~gl~~~i~~~~~D~~~~~~-----------~ 253 (342)
++++|=.|++ |+++..++ +.|.+|+.++.+++.++.+...+.. .+. ++.++.+|+.+... .
T Consensus 20 ~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 20 GKRALITGAT-KGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGT--DVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 5566665554 55555544 4589999999999988877776654 343 78999999987531 1
Q ss_pred CCccEEEEcCCCC
Q psy15742 254 LQGDVVFLSPPWG 266 (342)
Q Consensus 254 ~~~D~Ii~nPP~~ 266 (342)
+..|++|.|.-..
T Consensus 97 g~id~lv~nAg~~ 109 (266)
T 4egf_A 97 GGLDVLVNNAGIS 109 (266)
T ss_dssp TSCSEEEEECCCC
T ss_pred CCCCEEEECCCcC
Confidence 3789999886543
No 351
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=83.44 E-value=5.6 Score=34.73 Aligned_cols=73 Identities=16% Similarity=0.052 Sum_probs=51.4
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~ 254 (342)
++++|=.|+ +|+++..+++ .|.+|+.++.+++.++.+...+...+. ++.++.+|+.+.. .-+
T Consensus 22 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 22 SEVALVTGA-TSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV--EADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp SCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 556666554 5666655554 489999999999888777666665553 6889999987642 123
Q ss_pred CccEEEEcCCC
Q psy15742 255 QGDVVFLSPPW 265 (342)
Q Consensus 255 ~~D~Ii~nPP~ 265 (342)
..|++|.|.-.
T Consensus 99 ~iD~lv~~Ag~ 109 (277)
T 2rhc_B 99 PVDVLVNNAGR 109 (277)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999988643
No 352
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=83.43 E-value=1.8 Score=41.38 Aligned_cols=63 Identities=17% Similarity=0.184 Sum_probs=45.6
Q ss_pred CeEEeccCCCcHHHHHHHHh----CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----CCCCccEEEE
Q psy15742 191 DVVIDGFCGCGGNTIQFAAV----CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----PSLQGDVVFL 261 (342)
Q Consensus 191 ~~vLDlgcGtG~~~~~~a~~----~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----~~~~~D~Ii~ 261 (342)
.+|+= ||.|.++..+|+. +..|+.+|.+++.++.+..++ .+..++||+.+.. .-...|++++
T Consensus 4 M~iiI--~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 4 MKIII--LGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp EEEEE--ECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred CEEEE--ECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 34554 5556777777763 789999999999998877654 4678999988752 2246888886
Q ss_pred c
Q psy15742 262 S 262 (342)
Q Consensus 262 n 262 (342)
-
T Consensus 75 ~ 75 (461)
T 4g65_A 75 V 75 (461)
T ss_dssp C
T ss_pred E
Confidence 3
No 353
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=83.30 E-value=2.8 Score=36.76 Aligned_cols=73 Identities=15% Similarity=0.125 Sum_probs=52.5
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP----------SLQ 255 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~----------~~~ 255 (342)
++++|=.|+ +|+++..++ +.|.+|+.+|.+++.++.+...+...+. ++.++.+|+.+... .+.
T Consensus 33 gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 33 GRTALVTGS-SRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGG--TAQELAGDLSEAGAGTDLIERAEAIAP 109 (275)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTC--CEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC--eEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 566776554 555555554 4589999999998888777777766553 78999999976531 147
Q ss_pred ccEEEEcCCC
Q psy15742 256 GDVVFLSPPW 265 (342)
Q Consensus 256 ~D~Ii~nPP~ 265 (342)
.|++|.|.-.
T Consensus 110 iD~lvnnAg~ 119 (275)
T 4imr_A 110 VDILVINASA 119 (275)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999988654
No 354
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=83.15 E-value=3.7 Score=36.13 Aligned_cols=73 Identities=14% Similarity=-0.047 Sum_probs=51.9
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~ 254 (342)
++++|=.|+ +|+++..++ +.|.+|+.+|.+++.++.+...+...+ .++.++.+|+.+.. ..+
T Consensus 28 ~k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (283)
T 3v8b_A 28 SPVALITGA-GSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG--GQAIALEADVSDELQMRNAVRDLVLKFG 104 (283)
T ss_dssp CCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 556665554 455555554 458999999999998888777776544 37899999987642 113
Q ss_pred CccEEEEcCCC
Q psy15742 255 QGDVVFLSPPW 265 (342)
Q Consensus 255 ~~D~Ii~nPP~ 265 (342)
..|++|.|.-.
T Consensus 105 ~iD~lVnnAg~ 115 (283)
T 3v8b_A 105 HLDIVVANAGI 115 (283)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999988654
No 355
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=83.04 E-value=4.4 Score=34.93 Aligned_cols=73 Identities=10% Similarity=-0.011 Sum_probs=51.4
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC------C-----C-
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA------P-----S- 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~------~-----~- 253 (342)
++++|=.| |+|+++..+++ .|.+|+.++.++..++.+...+...+. ++.++.+|+.+.. . .
T Consensus 9 ~k~vlVTG-as~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 9 GCTALVTG-GSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF--KVEASVCDLSSRSERQELMNTVANHFH 85 (260)
T ss_dssp TCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--EEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 55676555 56666666554 489999999999888776666655443 6889999987642 0 1
Q ss_pred CCccEEEEcCCC
Q psy15742 254 LQGDVVFLSPPW 265 (342)
Q Consensus 254 ~~~D~Ii~nPP~ 265 (342)
+..|++|.|.-.
T Consensus 86 g~id~lv~~Ag~ 97 (260)
T 2ae2_A 86 GKLNILVNNAGI 97 (260)
T ss_dssp TCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 578999988653
No 356
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=82.68 E-value=4.7 Score=35.11 Aligned_cols=74 Identities=19% Similarity=0.119 Sum_probs=51.4
Q ss_pred CCeEEeccCCCcHHHHHH----HHhCCEEEEEeCC------------HHHHHHHHHHHHHcCCCCcEEEEEccccccC--
Q psy15742 190 SDVVIDGFCGCGGNTIQF----AAVCQKVISIDID------------PAKLRLAQHNASVYGVSHKIQFIQGDFFALA-- 251 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~----a~~~~~v~gvD~s------------~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-- 251 (342)
++++|=.|+ +|+++..+ ++.|.+|+.+|.+ .+.++.....+...+. ++.++.+|+.+..
T Consensus 13 gk~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 13 GKVAFITGA-ARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS--RIVARQADVRDRESL 89 (278)
T ss_dssp TCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC--CEEEEECCTTCHHHH
T ss_pred CCEEEEECC-CChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCC--eEEEEeCCCCCHHHH
Confidence 566776664 45555554 4459999999987 7777776666665553 7899999987642
Q ss_pred ---------CCCCccEEEEcCCCC
Q psy15742 252 ---------PSLQGDVVFLSPPWG 266 (342)
Q Consensus 252 ---------~~~~~D~Ii~nPP~~ 266 (342)
..+..|++|.|.-..
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 113789999986544
No 357
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=82.61 E-value=4.1 Score=29.92 Aligned_cols=66 Identities=21% Similarity=-0.011 Sum_probs=44.5
Q ss_pred CCeEEeccCCCcHHHHHHHH----hC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC----CCCCccEEE
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VC-QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA----PSLQGDVVF 260 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~-~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~----~~~~~D~Ii 260 (342)
+.+|+=+|+ |.++..+++ .| .+|+++|.++..++.+. . ..+.++..|..+.. .-..+|+|+
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~----~~~~~~~~d~~~~~~~~~~~~~~d~vi 74 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R----MGVATKQVDAKDEAGLAKALGGFDAVI 74 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T----TTCEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h----CCCcEEEecCCCHHHHHHHHcCCCEEE
Confidence 457888887 666655544 36 89999999998776654 1 24567777776531 012689999
Q ss_pred EcCCC
Q psy15742 261 LSPPW 265 (342)
Q Consensus 261 ~nPP~ 265 (342)
...|+
T Consensus 75 ~~~~~ 79 (118)
T 3ic5_A 75 SAAPF 79 (118)
T ss_dssp ECSCG
T ss_pred ECCCc
Confidence 88764
No 358
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=82.57 E-value=1.2 Score=39.60 Aligned_cols=42 Identities=19% Similarity=0.253 Sum_probs=30.1
Q ss_pred CHHHHHHHHHHHHHcCCCCcEEEEEccccccCCC-CCccEEEEcCCCCC
Q psy15742 220 DPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPS-LQGDVVFLSPPWGG 267 (342)
Q Consensus 220 s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~-~~~D~Ii~nPP~~~ 267 (342)
+.+.+..+.+.++ ++++.++|+.+.... ..-|+|++||||..
T Consensus 144 ~~~~l~~~~~~l~------~v~i~~~Df~~~i~~~~~~~fvY~DPPY~~ 186 (278)
T 2g1p_A 144 PEAELYHFAEKAQ------NAFFYCESYADSMARADDSSVVYCDPPYAP 186 (278)
T ss_dssp CHHHHHHHHHHGG------GEEEEECCHHHHHTTCCTTEEEEECCSCCC
T ss_pred CHHHHHHHHHHcC------CcEEEeCCHHHHHHhcCCCCEEEeCCcccc
Confidence 3456655555543 799999999887532 25589999999975
No 359
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=82.55 E-value=4.9 Score=35.58 Aligned_cols=73 Identities=19% Similarity=0.153 Sum_probs=51.0
Q ss_pred CCeEEeccCCCcHHHHHH----HHhCCEEEEEeCC------------HHHHHHHHHHHHHcCCCCcEEEEEccccccC--
Q psy15742 190 SDVVIDGFCGCGGNTIQF----AAVCQKVISIDID------------PAKLRLAQHNASVYGVSHKIQFIQGDFFALA-- 251 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~----a~~~~~v~gvD~s------------~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-- 251 (342)
++++|=.|++. +++..+ ++.|.+|+.+|.+ ++.++.+...+...+. ++.++.+|+.+..
T Consensus 28 gk~~lVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v 104 (299)
T 3t7c_A 28 GKVAFITGAAR-GQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR--RIIASQVDVRDFDAM 104 (299)
T ss_dssp TCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHH
T ss_pred CCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCC--ceEEEECCCCCHHHH
Confidence 56677666554 444444 4559999999987 7777777666666553 7899999997642
Q ss_pred ---------CCCCccEEEEcCCC
Q psy15742 252 ---------PSLQGDVVFLSPPW 265 (342)
Q Consensus 252 ---------~~~~~D~Ii~nPP~ 265 (342)
..+..|++|.|.-.
T Consensus 105 ~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHhCCCCEEEECCCC
Confidence 11478999988643
No 360
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=82.49 E-value=4.7 Score=34.66 Aligned_cols=76 Identities=11% Similarity=-0.040 Sum_probs=52.5
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEEEccccccC-----------CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVS-HKIQFIQGDFFALA-----------PS 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~-~~i~~~~~D~~~~~-----------~~ 253 (342)
++++|=.|++ |+++..++ +.|.+|+.++.+++.++.+.+.+...+-. .++.++.+|+.+.. ..
T Consensus 7 ~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (250)
T 3nyw_A 7 KGLAIITGAS-QGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY 85 (250)
T ss_dssp CCEEEEESTT-SHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence 5566665554 55555544 45899999999999888887777654221 36889999988642 11
Q ss_pred CCccEEEEcCCCC
Q psy15742 254 LQGDVVFLSPPWG 266 (342)
Q Consensus 254 ~~~D~Ii~nPP~~ 266 (342)
+..|++|.|.-..
T Consensus 86 g~iD~lvnnAg~~ 98 (250)
T 3nyw_A 86 GAVDILVNAAAMF 98 (250)
T ss_dssp CCEEEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 4789999886543
No 361
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=82.46 E-value=6.8 Score=34.29 Aligned_cols=75 Identities=19% Similarity=0.314 Sum_probs=51.6
Q ss_pred CCeEEeccCCCcHHHHHHHHh---------CCEEEEEe-----CCH----------------------HHHHH---HHHH
Q psy15742 190 SDVVIDGFCGCGGNTIQFAAV---------CQKVISID-----IDP----------------------AKLRL---AQHN 230 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~~---------~~~v~gvD-----~s~----------------------~~l~~---a~~n 230 (342)
.+.|+|+||..|..+..++.. ..+|+|+| ..+ +.++. ..+|
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 458999999999998887652 37899999 221 11221 1223
Q ss_pred HHHcCC-CCcEEEEEccccccC-------CCCCccEEEEcCC
Q psy15742 231 ASVYGV-SHKIQFIQGDFFALA-------PSLQGDVVFLSPP 264 (342)
Q Consensus 231 ~~~~gl-~~~i~~~~~D~~~~~-------~~~~~D~Ii~nPP 264 (342)
.+..|. +++++++.|++.+.+ +..++|+|++|--
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D 191 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD 191 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc
Confidence 334555 478999999998764 2347999999864
No 362
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=82.37 E-value=5 Score=34.97 Aligned_cols=74 Identities=22% Similarity=0.051 Sum_probs=51.7
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCC------------HHHHHHHHHHHHHcCCCCcEEEEEccccccCC-
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDID------------PAKLRLAQHNASVYGVSHKIQFIQGDFFALAP- 252 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s------------~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~- 252 (342)
++++|=.|++ |+++..++ +.|.+|+.+|.+ ...++.+...+...+. ++.++.+|+.+...
T Consensus 10 gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 10 DKVVLVTGGA-RGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR--KAYTAEVDVRDRAAV 86 (287)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS--CEEEEECCTTCHHHH
T ss_pred CCEEEEeCCC-ChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC--ceEEEEccCCCHHHH
Confidence 5566665554 55555544 458999999987 7777777777666553 78999999876421
Q ss_pred ----------CCCccEEEEcCCCC
Q psy15742 253 ----------SLQGDVVFLSPPWG 266 (342)
Q Consensus 253 ----------~~~~D~Ii~nPP~~ 266 (342)
.+..|++|.|.-..
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~ 110 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGIC 110 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcC
Confidence 13789999986543
No 363
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=82.23 E-value=2.2 Score=38.06 Aligned_cols=49 Identities=12% Similarity=0.150 Sum_probs=37.8
Q ss_pred HHHHHHHHHhcCC-CCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHH
Q psy15742 177 EKVAQHIASRCKA-SDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLA 227 (342)
Q Consensus 177 e~~~~~i~~~~~~-~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a 227 (342)
..++..+...+++ ..+.+|++||+|.++..+. ...++..|+++..+..-
T Consensus 22 ~~l~~~i~~~lp~~~~~yvEpF~GggaV~~~~~--~~~~i~ND~n~~Lin~y 71 (284)
T 2dpm_A 22 RQLLPVIRELIPKTYNRYFEPFVGGGALFFDLA--PKDAVINDFNAELINCY 71 (284)
T ss_dssp GGGHHHHHHHSCSSCSCEEETTCTTCHHHHHHC--CSEEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHhccccCEEEeecCCccHHHHhhh--ccceeeeecchHHHHHH
Confidence 3455666666665 5689999999999988763 36899999999887554
No 364
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=81.83 E-value=1.9 Score=38.27 Aligned_cols=47 Identities=15% Similarity=0.289 Sum_probs=37.7
Q ss_pred HHHHHHHHHhcCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHH
Q psy15742 177 EKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLR 225 (342)
Q Consensus 177 e~~~~~i~~~~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~ 225 (342)
..++..|...+++..+.+|++||+|.++..+. ..+++..|+++..+.
T Consensus 15 ~~l~~~i~~~~p~~~~yvEpF~Ggg~V~~~~~--~~~~i~ND~n~~lin 61 (278)
T 2g1p_A 15 YPLLDDIKRHLPKGECLVEPFVGAGSVFLNTD--FSRYILADINSDLIS 61 (278)
T ss_dssp GGGHHHHHHHCCCCSEEEETTCTTCHHHHTCC--CSEEEEEESCHHHHH
T ss_pred HHHHHHHHHhccccCeEEeeccCccHHHHhhc--ccceEEEeccHHHHH
Confidence 45567777777777899999999999887653 468999999998874
No 365
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=81.71 E-value=5.7 Score=34.39 Aligned_cols=75 Identities=12% Similarity=0.011 Sum_probs=52.4
Q ss_pred CCeEEeccCCCcHHHHHH----HHhCCEEEEEeCCHHHHHHHHHHHHH-cCCCCcEEEEEccccccC-----------CC
Q psy15742 190 SDVVIDGFCGCGGNTIQF----AAVCQKVISIDIDPAKLRLAQHNASV-YGVSHKIQFIQGDFFALA-----------PS 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~----a~~~~~v~gvD~s~~~l~~a~~n~~~-~gl~~~i~~~~~D~~~~~-----------~~ 253 (342)
++++|=.|++ |+++..+ ++.|.+|+.++.+++.++.+...+.. .+- .++.++.+|+.+.. ..
T Consensus 8 ~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 8 EAVAVVTGGS-SGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPG-ARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp TCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTT-CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-ceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 5566666655 4555554 44589999999999988887777765 332 25889999987642 11
Q ss_pred CCccEEEEcCCCC
Q psy15742 254 LQGDVVFLSPPWG 266 (342)
Q Consensus 254 ~~~D~Ii~nPP~~ 266 (342)
+..|++|.|.-..
T Consensus 86 g~id~lvnnAg~~ 98 (265)
T 3lf2_A 86 GCASILVNNAGQG 98 (265)
T ss_dssp CSCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4789999987543
No 366
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=81.43 E-value=5.4 Score=34.90 Aligned_cols=74 Identities=16% Similarity=0.104 Sum_probs=50.8
Q ss_pred CCeEEeccCCCcHHHHHH----HHhCCEEEEEeCC----------------HHHHHHHHHHHHHcCCCCcEEEEEccccc
Q psy15742 190 SDVVIDGFCGCGGNTIQF----AAVCQKVISIDID----------------PAKLRLAQHNASVYGVSHKIQFIQGDFFA 249 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~----a~~~~~v~gvD~s----------------~~~l~~a~~n~~~~gl~~~i~~~~~D~~~ 249 (342)
++++|=.|++. +++..+ ++.|.+|+.+|.+ .+.++.....+...+ .++.++.+|+.+
T Consensus 11 ~k~~lVTGas~-gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 87 (286)
T 3uve_A 11 GKVAFVTGAAR-GQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN--RRIVTAEVDVRD 87 (286)
T ss_dssp TCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT--CCEEEEECCTTC
T ss_pred CCEEEEeCCCc-hHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC--CceEEEEcCCCC
Confidence 56677666654 444444 4459999999987 777776666665554 378999999876
Q ss_pred cC-----------CCCCccEEEEcCCCC
Q psy15742 250 LA-----------PSLQGDVVFLSPPWG 266 (342)
Q Consensus 250 ~~-----------~~~~~D~Ii~nPP~~ 266 (342)
.. ..+..|++|.|.-..
T Consensus 88 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 115 (286)
T 3uve_A 88 YDALKAAVDSGVEQLGRLDIIVANAGIG 115 (286)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCccc
Confidence 42 113789999986543
No 367
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=81.35 E-value=6.6 Score=33.50 Aligned_cols=73 Identities=15% Similarity=0.003 Sum_probs=53.3
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~ 254 (342)
++++|=.|+ +|+++..++ +.|.+|+.+|.+++.++.+.+.+...+- ++.++.+|+.+.. ..+
T Consensus 9 ~k~vlITGa-s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 9 NKVGIVTGS-GGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGG--TAISVAVDVSDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--EEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 556776665 555555554 4589999999999999888887776553 7889999998742 013
Q ss_pred CccEEEEcCCC
Q psy15742 255 QGDVVFLSPPW 265 (342)
Q Consensus 255 ~~D~Ii~nPP~ 265 (342)
..|++|.|.-.
T Consensus 86 ~id~li~~Ag~ 96 (253)
T 3qiv_A 86 GIDYLVNNAAI 96 (253)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 78999998754
No 368
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=81.26 E-value=6.9 Score=34.24 Aligned_cols=73 Identities=18% Similarity=0.109 Sum_probs=50.6
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeC-CHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----------C
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDI-DPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----------S 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~-s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----------~ 253 (342)
++++|=.|+ +|+++..++ +.|.+|+.++. +++.++.....+...+. ++.++.+|+.+... .
T Consensus 29 ~k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 29 RPVAIVTGG-RRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGA--RVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTC--CEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred CCEEEEecC-CCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 556665555 455555544 45899999995 78777777777766653 78999999987531 1
Q ss_pred CCccEEEEcCCC
Q psy15742 254 LQGDVVFLSPPW 265 (342)
Q Consensus 254 ~~~D~Ii~nPP~ 265 (342)
+..|++|.|.-.
T Consensus 106 g~iD~lvnnAg~ 117 (280)
T 4da9_A 106 GRIDCLVNNAGI 117 (280)
T ss_dssp SCCCEEEEECC-
T ss_pred CCCCEEEECCCc
Confidence 368999988654
No 369
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=81.24 E-value=7.6 Score=33.27 Aligned_cols=73 Identities=14% Similarity=-0.053 Sum_probs=50.2
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~ 254 (342)
++++|=.| |+|+++..+++ .|.+|+.++.++..++...+.+...+. ++.++.+|+.+.. ..+
T Consensus 2 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g 78 (256)
T 1geg_A 2 KKVALVTG-AGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG--HAVAVKVDVSDRDQVFAAVEQARKTLG 78 (256)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 34555555 45666665554 589999999999887776666655443 6889999987642 113
Q ss_pred CccEEEEcCCC
Q psy15742 255 QGDVVFLSPPW 265 (342)
Q Consensus 255 ~~D~Ii~nPP~ 265 (342)
..|++|.|.-.
T Consensus 79 ~id~lv~nAg~ 89 (256)
T 1geg_A 79 GFDVIVNNAGV 89 (256)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999988643
No 370
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=81.20 E-value=7.1 Score=33.60 Aligned_cols=74 Identities=14% Similarity=-0.013 Sum_probs=53.2
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----------CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----------SL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----------~~ 254 (342)
++++|=.|+ +|+++..++ +.|.+|+.+|.+++.++.....+...+. ++.++.+|+.+... .+
T Consensus 12 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 12 DAVAIVTGA-AAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG--KAIGLECNVTDEQHREAVIKAALDQFG 88 (256)
T ss_dssp TCEEEECSC-SSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 556665554 455555554 4599999999999988888877776653 78999999876421 13
Q ss_pred CccEEEEcCCCC
Q psy15742 255 QGDVVFLSPPWG 266 (342)
Q Consensus 255 ~~D~Ii~nPP~~ 266 (342)
..|++|.|.-..
T Consensus 89 ~id~lv~nAg~~ 100 (256)
T 3gaf_A 89 KITVLVNNAGGG 100 (256)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 789999986543
No 371
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=81.04 E-value=2.3 Score=38.69 Aligned_cols=44 Identities=18% Similarity=0.149 Sum_probs=35.3
Q ss_pred hcCCCCeEEeccCCC-cHHHHHHHHh-CCEEEEEeCCHHHHHHHHH
Q psy15742 186 RCKASDVVIDGFCGC-GGNTIQFAAV-CQKVISIDIDPAKLRLAQH 229 (342)
Q Consensus 186 ~~~~~~~vLDlgcGt-G~~~~~~a~~-~~~v~gvD~s~~~l~~a~~ 229 (342)
.+++|++||-.|+|. |..++.+|+. |.+|+++|.+++.++.+++
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 210 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN 210 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH
Confidence 456889999999864 6677777775 7889999999998888763
No 372
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=80.85 E-value=6.8 Score=34.57 Aligned_cols=72 Identities=10% Similarity=-0.008 Sum_probs=50.6
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~ 254 (342)
++++|=.| |+|+++..+++ .|.+|+.++.++..++.+...+...+. ++.++.+|+.+.. ..+
T Consensus 34 ~k~vlVTG-as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (291)
T 3cxt_A 34 GKIALVTG-ASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGI--NAHGYVCDVTDEDGIQAMVAQIESEVG 110 (291)
T ss_dssp TCEEEEET-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC--CCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 55666555 55666666554 489999999999888776666655553 6788999987642 123
Q ss_pred CccEEEEcCC
Q psy15742 255 QGDVVFLSPP 264 (342)
Q Consensus 255 ~~D~Ii~nPP 264 (342)
..|++|.|.-
T Consensus 111 ~iD~lvnnAg 120 (291)
T 3cxt_A 111 IIDILVNNAG 120 (291)
T ss_dssp CCCEEEECCC
T ss_pred CCcEEEECCC
Confidence 6899998854
No 373
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=80.72 E-value=3.1 Score=36.51 Aligned_cols=74 Identities=12% Similarity=-0.040 Sum_probs=52.6
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----------CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----------SL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----------~~ 254 (342)
++++|=.|++ |+++..++ +.|.+|+.++.+++.++.....+...+. ++.++.+|+.+... .+
T Consensus 32 gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 32 GKRALITGAS-TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG--KALPIRCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC--CCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5566665554 55555554 4589999999999888877777766653 78899999876521 13
Q ss_pred CccEEEEcCCCC
Q psy15742 255 QGDVVFLSPPWG 266 (342)
Q Consensus 255 ~~D~Ii~nPP~~ 266 (342)
..|++|.|.-..
T Consensus 109 ~iD~lvnnAg~~ 120 (276)
T 3r1i_A 109 GIDIAVCNAGIV 120 (276)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 789999986543
No 374
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=80.70 E-value=13 Score=32.70 Aligned_cols=59 Identities=12% Similarity=-0.088 Sum_probs=41.7
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEe-CCHHHHHHHHHHHH-HcCCCCcEEEEEccccccC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISID-IDPAKLRLAQHNAS-VYGVSHKIQFIQGDFFALA 251 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD-~s~~~l~~a~~n~~-~~gl~~~i~~~~~D~~~~~ 251 (342)
++++|=.|+ +|+++..+++ .|.+|+.++ .++..++.+...+. ..+ .++.++.+|+.+..
T Consensus 9 ~k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 9 VPVALVTGA-AKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP--NSAITVQADLSNVA 73 (291)
T ss_dssp CCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSSSC
T ss_pred CCEEEEECC-CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC--CeeEEEEeecCCcc
Confidence 556665554 5566665554 489999999 99988877766665 444 37889999987653
No 375
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=80.59 E-value=7.8 Score=33.64 Aligned_cols=71 Identities=11% Similarity=-0.015 Sum_probs=47.4
Q ss_pred CCeEEeccCCCcH---HHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC------CCCCccEEE
Q psy15742 190 SDVVIDGFCGCGG---NTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA------PSLQGDVVF 260 (342)
Q Consensus 190 ~~~vLDlgcGtG~---~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~------~~~~~D~Ii 260 (342)
|+++|=-|.+.|. .+..+++.|.+|+..|.+.. +.+.+.++..|. ++.++.+|+.+.. ..+..|++|
T Consensus 9 GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~--~~~~~~~Dv~d~~~v~~~~~~g~iDiLV 84 (247)
T 4hp8_A 9 GRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGG--NASALLIDFADPLAAKDSFTDAGFDILV 84 (247)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTC--CEEEEECCTTSTTTTTTSSTTTCCCEEE
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCC--cEEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence 6677766666554 34445556999999998743 233444555554 7889999987653 335789999
Q ss_pred EcCC
Q psy15742 261 LSPP 264 (342)
Q Consensus 261 ~nPP 264 (342)
-|-=
T Consensus 85 NNAG 88 (247)
T 4hp8_A 85 NNAG 88 (247)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 8753
No 376
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=80.48 E-value=8.9 Score=32.56 Aligned_cols=72 Identities=11% Similarity=0.026 Sum_probs=49.2
Q ss_pred CCCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-------CCCCcc
Q psy15742 189 ASDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-------PSLQGD 257 (342)
Q Consensus 189 ~~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-------~~~~~D 257 (342)
+++++|=.|+ +|+++..++ +.|.+|+.++.++..++.....+. .++.+..+|+.+.. ..+..|
T Consensus 13 ~~k~vlVTGa-s~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~id 86 (249)
T 3f9i_A 13 TGKTSLITGA-SSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK-----DNYTIEVCNLANKEECSNLISKTSNLD 86 (249)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----SSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc-----cCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence 3667776665 455555554 458999999999988776655442 36889999987642 224789
Q ss_pred EEEEcCCCC
Q psy15742 258 VVFLSPPWG 266 (342)
Q Consensus 258 ~Ii~nPP~~ 266 (342)
++|.|.-..
T Consensus 87 ~li~~Ag~~ 95 (249)
T 3f9i_A 87 ILVCNAGIT 95 (249)
T ss_dssp EEEECCC--
T ss_pred EEEECCCCC
Confidence 999986543
No 377
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=80.44 E-value=7.3 Score=33.56 Aligned_cols=73 Identities=16% Similarity=0.081 Sum_probs=53.9
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----------CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----------SL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----------~~ 254 (342)
++++|=.|+ +|+++..+++ .|.+|+.++.+++.++.....+...+. ++.++.+|+.+... .+
T Consensus 29 ~k~vlITGa-s~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 29 GQVAVVTGA-SRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG--EAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--EEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-CChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC--ceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 556766554 5666666554 489999999999999888888776653 78999999876421 13
Q ss_pred CccEEEEcCCC
Q psy15742 255 QGDVVFLSPPW 265 (342)
Q Consensus 255 ~~D~Ii~nPP~ 265 (342)
..|++|.|.-.
T Consensus 106 ~id~lv~~Ag~ 116 (262)
T 3rkr_A 106 RCDVLVNNAGV 116 (262)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 68999998654
No 378
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=80.40 E-value=1.6 Score=40.22 Aligned_cols=44 Identities=20% Similarity=0.113 Sum_probs=36.1
Q ss_pred hcCCCCeEEeccCCC-cHHHHHHHHh-CCEEEEEeCCHHHHHHHHH
Q psy15742 186 RCKASDVVIDGFCGC-GGNTIQFAAV-CQKVISIDIDPAKLRLAQH 229 (342)
Q Consensus 186 ~~~~~~~vLDlgcGt-G~~~~~~a~~-~~~v~gvD~s~~~l~~a~~ 229 (342)
.+++|++||-.|+|. |..++.+|+. |.+|+++|.+++.++.+++
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA 236 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 456889999999874 7777777775 8899999999998888764
No 379
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=80.37 E-value=6.7 Score=34.02 Aligned_cols=75 Identities=12% Similarity=-0.082 Sum_probs=51.7
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeC-CHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDI-DPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PS 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~-s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~ 253 (342)
++++|=.|++ |+++..++ +.|.+|+.++. ++...+.....++..+. ++.++.+|+.+.. ..
T Consensus 29 ~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~ 105 (271)
T 4iin_A 29 GKNVLITGAS-KGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGY--KAAVIKFDAASESDFIEAIQTIVQSD 105 (271)
T ss_dssp CCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC--ceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 5567766654 55555554 45899999998 66667776666666664 7899999987642 11
Q ss_pred CCccEEEEcCCCCC
Q psy15742 254 LQGDVVFLSPPWGG 267 (342)
Q Consensus 254 ~~~D~Ii~nPP~~~ 267 (342)
+..|++|.|.-...
T Consensus 106 g~id~li~nAg~~~ 119 (271)
T 4iin_A 106 GGLSYLVNNAGVVR 119 (271)
T ss_dssp SSCCEEEECCCCCC
T ss_pred CCCCEEEECCCcCC
Confidence 37899999865443
No 380
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=80.34 E-value=6.4 Score=35.21 Aligned_cols=74 Identities=19% Similarity=0.122 Sum_probs=50.5
Q ss_pred CCeEEeccCCCcHHHHHH----HHhCCEEEEEeCC------------HHHHHHHHHHHHHcCCCCcEEEEEccccccC--
Q psy15742 190 SDVVIDGFCGCGGNTIQF----AAVCQKVISIDID------------PAKLRLAQHNASVYGVSHKIQFIQGDFFALA-- 251 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~----a~~~~~v~gvD~s------------~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-- 251 (342)
++++|=.|++ |+++..+ ++.|.+|+.+|.+ .+.++.+...+...+. ++.++.+|+.+..
T Consensus 46 gk~~lVTGas-~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v 122 (317)
T 3oec_A 46 GKVAFITGAA-RGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR--RIIARQADVRDLASL 122 (317)
T ss_dssp TCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCC--eEEEEECCCCCHHHH
Confidence 5566665654 5555554 4459999999986 6777666666665553 7899999987642
Q ss_pred ---------CCCCccEEEEcCCCC
Q psy15742 252 ---------PSLQGDVVFLSPPWG 266 (342)
Q Consensus 252 ---------~~~~~D~Ii~nPP~~ 266 (342)
..+..|++|.|.-..
T Consensus 123 ~~~~~~~~~~~g~iD~lVnnAg~~ 146 (317)
T 3oec_A 123 QAVVDEALAEFGHIDILVSNVGIS 146 (317)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 113789999886543
No 381
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=80.33 E-value=4.9 Score=31.58 Aligned_cols=67 Identities=13% Similarity=-0.018 Sum_probs=43.0
Q ss_pred CeEEeccCCCcHHHHHHHH----hCCEEEEEeCC-HHHHHHHHHHHHHcCCCCcEEEEEccccccC-----CCCCccEEE
Q psy15742 191 DVVIDGFCGCGGNTIQFAA----VCQKVISIDID-PAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----PSLQGDVVF 260 (342)
Q Consensus 191 ~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s-~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----~~~~~D~Ii 260 (342)
.+++=+| .|.++..+++ .+..|+.+|.+ ++.++....... ..+.++.+|..+.. .-...|+|+
T Consensus 4 ~~vlI~G--~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-----~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (153)
T 1id1_A 4 DHFIVCG--HSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-----DNADVIPGDSNDSSVLKKAGIDRCRAIL 76 (153)
T ss_dssp SCEEEEC--CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-----TTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred CcEEEEC--CCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-----CCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence 3566555 4777776654 38899999997 555544443321 24688999986532 224689998
Q ss_pred EcCC
Q psy15742 261 LSPP 264 (342)
Q Consensus 261 ~nPP 264 (342)
+--|
T Consensus 77 ~~~~ 80 (153)
T 1id1_A 77 ALSD 80 (153)
T ss_dssp ECSS
T ss_pred EecC
Confidence 8655
No 382
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=80.19 E-value=2.5 Score=39.22 Aligned_cols=72 Identities=19% Similarity=0.115 Sum_probs=54.1
Q ss_pred CCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCC-cEEEEEccccccCCCCCccEEEEcCCCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSH-KIQFIQGDFFALAPSLQGDVVFLSPPWG 266 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~-~i~~~~~D~~~~~~~~~~D~Ii~nPP~~ 266 (342)
+.+||.++.+.|.++..++.. .++.+.-|-.....++.|++.||+++ .+++.. ..+. ....||+|+.-.|..
T Consensus 39 ~~~~~~~~d~~gal~~~~~~~--~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~-~~~~~~~v~~~lpk~ 111 (375)
T 4dcm_A 39 RGPVLILNDAFGALSCALAEH--KPYSIGDSYISELATRENLRLNGIDESSVKFLD--STAD-YPQQPGVVLIKVPKT 111 (375)
T ss_dssp CSCEEEECCSSSHHHHHTGGG--CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEE--TTSC-CCSSCSEEEEECCSC
T ss_pred CCCEEEECCCCCHHHHhhccC--CceEEEhHHHHHHHHHHHHHHcCCCccceEecc--cccc-cccCCCEEEEEcCCC
Confidence 568999999999999988754 45666668888889999999999964 355543 2222 234799999988844
No 383
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=80.08 E-value=8.2 Score=33.98 Aligned_cols=75 Identities=15% Similarity=-0.020 Sum_probs=52.1
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCC---EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC----------
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQ---KVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP---------- 252 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~---~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~---------- 252 (342)
++++|=.|++ |+++..+++ .|. +|+.++.+.+.++.+.+.+....-..++.++.+|+.+...
T Consensus 33 ~k~~lVTGas-~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 33 KKTVLITGAS-AGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCEEEEecCC-ChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 6677766654 555555543 455 9999999999988887777654322378899999876531
Q ss_pred -CCCccEEEEcCCC
Q psy15742 253 -SLQGDVVFLSPPW 265 (342)
Q Consensus 253 -~~~~D~Ii~nPP~ 265 (342)
-+..|++|.|.-.
T Consensus 112 ~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 112 EFKDIDILVNNAGK 125 (287)
T ss_dssp GGCSCCEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 1378999988643
No 384
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=79.94 E-value=3.2 Score=37.10 Aligned_cols=64 Identities=14% Similarity=0.009 Sum_probs=44.6
Q ss_pred cCCCCeEEeccCC-CcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEE
Q psy15742 187 CKASDVVIDGFCG-CGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFL 261 (342)
Q Consensus 187 ~~~~~~vLDlgcG-tG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~ 261 (342)
+++|++||=.|+| .|..++.+|+. |.+|++++ +++.++.+++ .|.+ .++. | .+.. ...+|+|+-
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~----lGa~---~v~~-d-~~~v-~~g~Dvv~d 205 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAK----RGVR---HLYR-E-PSQV-TQKYFAIFD 205 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHH----HTEE---EEES-S-GGGC-CSCEEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHH----cCCC---EEEc-C-HHHh-CCCccEEEE
Confidence 4578999999985 47777888876 88999999 9888888765 3431 2222 5 2222 457888774
No 385
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=79.86 E-value=7.2 Score=33.94 Aligned_cols=74 Identities=16% Similarity=0.079 Sum_probs=51.2
Q ss_pred CCeEEeccCCCcHHHHHH----HHhCCEEEEEeC-------------CHHHHHHHHHHHHHcCCCCcEEEEEccccccC-
Q psy15742 190 SDVVIDGFCGCGGNTIQF----AAVCQKVISIDI-------------DPAKLRLAQHNASVYGVSHKIQFIQGDFFALA- 251 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~----a~~~~~v~gvD~-------------s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~- 251 (342)
++++|=.|++ |+++..+ ++.|.+|+.+|. +...++.+.+.+...+. ++.++.+|+.+..
T Consensus 11 ~k~~lVTGas-~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 11 GRVAFITGAA-RGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR--RIVAAVVDTRDFDR 87 (277)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHH
T ss_pred CCEEEEECCc-cHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC--eEEEEECCCCCHHH
Confidence 5567766654 4555444 445999999998 67777777666665553 7899999987642
Q ss_pred -----C-----CCCccEEEEcCCCC
Q psy15742 252 -----P-----SLQGDVVFLSPPWG 266 (342)
Q Consensus 252 -----~-----~~~~D~Ii~nPP~~ 266 (342)
. .+..|++|.|.-..
T Consensus 88 v~~~~~~~~~~~g~id~lvnnAg~~ 112 (277)
T 3tsc_A 88 LRKVVDDGVAALGRLDIIVANAGVA 112 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 0 14689999986543
No 386
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=79.49 E-value=2.6 Score=38.58 Aligned_cols=43 Identities=26% Similarity=0.122 Sum_probs=34.7
Q ss_pred cCCCCeEEeccCCC-cHHHHHHHHh-CCEEEEEeCCHHHHHHHHH
Q psy15742 187 CKASDVVIDGFCGC-GGNTIQFAAV-CQKVISIDIDPAKLRLAQH 229 (342)
Q Consensus 187 ~~~~~~vLDlgcGt-G~~~~~~a~~-~~~v~gvD~s~~~l~~a~~ 229 (342)
+++|++||-.|+|. |..++.+|+. |.+|+++|.+++.++.+++
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 231 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFA 231 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHH
Confidence 56789999998764 6667777775 8899999999998888754
No 387
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=79.40 E-value=8.7 Score=33.34 Aligned_cols=76 Identities=11% Similarity=0.015 Sum_probs=53.9
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----------CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----------SL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----------~~ 254 (342)
++++|=.| |+|+++..+++ .|.+|++++.++..++.....+...+...++.++.+|+.+... .+
T Consensus 32 ~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 110 (279)
T 1xg5_A 32 DRLALVTG-ASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 110 (279)
T ss_dssp TCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 55666555 56666666654 4899999999998887777777666654578889999876421 13
Q ss_pred CccEEEEcCCCC
Q psy15742 255 QGDVVFLSPPWG 266 (342)
Q Consensus 255 ~~D~Ii~nPP~~ 266 (342)
.+|+||.+.-..
T Consensus 111 ~iD~vi~~Ag~~ 122 (279)
T 1xg5_A 111 GVDICINNAGLA 122 (279)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999886543
No 388
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=79.32 E-value=8.2 Score=33.54 Aligned_cols=73 Identities=12% Similarity=-0.044 Sum_probs=52.4
Q ss_pred CCeEEeccCCCcHHHHHH----HHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQF----AAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~----a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~ 254 (342)
++++|=.|++ |+++..+ ++.|.+|+.++.+++.++.+...+...+. ++.++.+|+.+.. ..+
T Consensus 4 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 4 DKVILITGAS-GGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG--TALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp TCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC--EEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4566666655 5555544 44589999999999998888877776653 7889999987642 113
Q ss_pred CccEEEEcCCC
Q psy15742 255 QGDVVFLSPPW 265 (342)
Q Consensus 255 ~~D~Ii~nPP~ 265 (342)
..|++|.|.-.
T Consensus 81 ~iD~lVnnAG~ 91 (264)
T 3tfo_A 81 RIDVLVNNAGV 91 (264)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999988644
No 389
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=78.75 E-value=2.3 Score=34.99 Aligned_cols=42 Identities=14% Similarity=0.169 Sum_probs=31.7
Q ss_pred cCCCCeEEeccC--CCcHHHHHHHHh-CCEEEEEeCCHHHHHHHH
Q psy15742 187 CKASDVVIDGFC--GCGGNTIQFAAV-CQKVISIDIDPAKLRLAQ 228 (342)
Q Consensus 187 ~~~~~~vLDlgc--GtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~ 228 (342)
+++|++||..|+ |.|.....+++. |.+|+++|.+++..+.++
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~ 80 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS 80 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 457889999984 455556666554 889999999998877664
No 390
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=78.64 E-value=7.7 Score=33.30 Aligned_cols=73 Identities=10% Similarity=-0.063 Sum_probs=51.2
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC------C------C
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA------P------S 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~------~------~ 253 (342)
++++|=.| |+|+++..+++ .|.+|+.++.++..++.....+...+. ++.++.+|+.+.. . .
T Consensus 14 ~k~vlITG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~ 90 (266)
T 1xq1_A 14 AKTVLVTG-GTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF--QVTGSVCDASLRPEREKLMQTVSSMFG 90 (266)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 55666554 56666666654 489999999999887776666665543 6889999987642 1 1
Q ss_pred CCccEEEEcCCC
Q psy15742 254 LQGDVVFLSPPW 265 (342)
Q Consensus 254 ~~~D~Ii~nPP~ 265 (342)
+..|++|.+.-.
T Consensus 91 ~~id~li~~Ag~ 102 (266)
T 1xq1_A 91 GKLDILINNLGA 102 (266)
T ss_dssp TCCSEEEEECCC
T ss_pred CCCcEEEECCCC
Confidence 468999987543
No 391
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=78.58 E-value=9.6 Score=33.58 Aligned_cols=74 Identities=8% Similarity=-0.170 Sum_probs=50.8
Q ss_pred CCeEEeccCCCc-H----HHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CC
Q psy15742 190 SDVVIDGFCGCG-G----NTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PS 253 (342)
Q Consensus 190 ~~~vLDlgcGtG-~----~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~ 253 (342)
++++|=.|++.| + ++..+++.|.+|+.++.++...+.+.+.....+ ++.++.+|+.+.. ..
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHHhc
Confidence 667888787643 2 444555669999999999766665555544443 5789999987642 12
Q ss_pred CCccEEEEcCCCC
Q psy15742 254 LQGDVVFLSPPWG 266 (342)
Q Consensus 254 ~~~D~Ii~nPP~~ 266 (342)
+..|++|.|.-..
T Consensus 108 g~iD~lVnnAG~~ 120 (293)
T 3grk_A 108 GKLDFLVHAIGFS 120 (293)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCccC
Confidence 4789999986543
No 392
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=78.50 E-value=7.2 Score=33.55 Aligned_cols=72 Identities=18% Similarity=0.063 Sum_probs=51.5
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~ 254 (342)
++++|=.|+ +|+++..++ +.|.+|+.+|.+++.++.+...+...+ .++.++.+|+.+.. ..+
T Consensus 6 ~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 6 EKVVIITGG-SSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP--GQILTVQMDVRNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCST--TCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 556665554 455555554 458999999999998888877765544 37899999987642 113
Q ss_pred CccEEEEcCC
Q psy15742 255 QGDVVFLSPP 264 (342)
Q Consensus 255 ~~D~Ii~nPP 264 (342)
..|++|.|.-
T Consensus 83 ~id~lv~nAg 92 (257)
T 3imf_A 83 RIDILINNAA 92 (257)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899998864
No 393
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=78.46 E-value=10 Score=32.11 Aligned_cols=74 Identities=14% Similarity=0.034 Sum_probs=52.2
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC------C-----CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA------P-----SL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~------~-----~~ 254 (342)
++++|=.| |+|+++..+++ .|.+|++++.++..++...+.+...+ .++.++.+|+.+.. . .+
T Consensus 11 ~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 87 (255)
T 1fmc_A 11 GKCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG--GQAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 55666554 66777777665 38999999999988777666666554 36889999987642 0 13
Q ss_pred CccEEEEcCCCC
Q psy15742 255 QGDVVFLSPPWG 266 (342)
Q Consensus 255 ~~D~Ii~nPP~~ 266 (342)
..|+||.+.-..
T Consensus 88 ~~d~vi~~Ag~~ 99 (255)
T 1fmc_A 88 KVDILVNNAGGG 99 (255)
T ss_dssp SCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999876543
No 394
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=78.30 E-value=5.7 Score=34.84 Aligned_cols=74 Identities=12% Similarity=-0.062 Sum_probs=50.8
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----------CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----------SL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----------~~ 254 (342)
++++|=.|+ +|+++..++ +.|.+|+.+|.+++.++.+...+...+- ..+.++.+|+.+... .+
T Consensus 33 gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (281)
T 4dry_A 33 GRIALVTGG-GTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG-NIVRAVVCDVGDPDQVAALFAAVRAEFA 110 (281)
T ss_dssp -CEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 556766555 455555554 4589999999999988877776655442 246899999876521 13
Q ss_pred CccEEEEcCCC
Q psy15742 255 QGDVVFLSPPW 265 (342)
Q Consensus 255 ~~D~Ii~nPP~ 265 (342)
..|++|.|.-.
T Consensus 111 ~iD~lvnnAG~ 121 (281)
T 4dry_A 111 RLDLLVNNAGS 121 (281)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999988654
No 395
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=78.16 E-value=2.4 Score=38.66 Aligned_cols=44 Identities=16% Similarity=0.021 Sum_probs=35.2
Q ss_pred hcCCCCeEEeccCCC-cHHHHHHHHh-CC-EEEEEeCCHHHHHHHHH
Q psy15742 186 RCKASDVVIDGFCGC-GGNTIQFAAV-CQ-KVISIDIDPAKLRLAQH 229 (342)
Q Consensus 186 ~~~~~~~vLDlgcGt-G~~~~~~a~~-~~-~v~gvD~s~~~l~~a~~ 229 (342)
.+++|++||=.|+|. |..++.+|+. |. +|+++|.+++.++.+++
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 209 (352)
T 3fpc_A 163 NIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE 209 (352)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 356789999998864 6677777776 66 89999999998888765
No 396
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=78.15 E-value=2.7 Score=39.56 Aligned_cols=65 Identities=17% Similarity=0.205 Sum_probs=45.3
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----CCCCccEEE
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----PSLQGDVVF 260 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----~~~~~D~Ii 260 (342)
+.+|+=+|+ |.++..+++ .+..|+.+|.|++.++.++. .| +.++.+|+.+.. .-...|+|+
T Consensus 4 ~~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~g----~~vi~GDat~~~~L~~agi~~A~~vi 73 (413)
T 3l9w_A 4 GMRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----FG----MKVFYGDATRMDLLESAGAAKAEVLI 73 (413)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----TT----CCCEESCTTCHHHHHHTTTTTCSEEE
T ss_pred CCeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----CC----CeEEEcCCCCHHHHHhcCCCccCEEE
Confidence 345666665 566665554 38999999999999988763 23 467899987642 234789888
Q ss_pred EcCC
Q psy15742 261 LSPP 264 (342)
Q Consensus 261 ~nPP 264 (342)
+--|
T Consensus 74 v~~~ 77 (413)
T 3l9w_A 74 NAID 77 (413)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 8555
No 397
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=78.04 E-value=16 Score=32.73 Aligned_cols=59 Identities=12% Similarity=-0.088 Sum_probs=41.7
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEe-CCHHHHHHHHHHHH-HcCCCCcEEEEEccccccC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISID-IDPAKLRLAQHNAS-VYGVSHKIQFIQGDFFALA 251 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD-~s~~~l~~a~~n~~-~~gl~~~i~~~~~D~~~~~ 251 (342)
++++|=.| |+|+++..+++ .|.+|+.++ .++..++.+...+. ..+ .++.++.+|+.+..
T Consensus 46 ~k~~lVTG-as~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~d~~ 110 (328)
T 2qhx_A 46 VPVALVTG-AAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP--NSAITVQADLSNVA 110 (328)
T ss_dssp CCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSSSC
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC--CeEEEEEeeCCCch
Confidence 55666544 55666666554 489999999 99988877766664 344 37889999987653
No 398
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=78.01 E-value=8.7 Score=33.36 Aligned_cols=74 Identities=12% Similarity=-0.054 Sum_probs=51.2
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeC-CHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDI-DPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PS 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~-s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~ 253 (342)
++++|=.|+ +|+++..++ +.|.+|+.++. +....+.....+...+. ++.++.+|+.+.. ..
T Consensus 28 ~k~vlVTGa-s~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~d~~~v~~~~~~~~~~~ 104 (269)
T 4dmm_A 28 DRIALVTGA-SRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGG--EAFAVKADVSQESEVEALFAAVIERW 104 (269)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 556665554 455555554 45899999988 77777777776666553 7889999988742 11
Q ss_pred CCccEEEEcCCCC
Q psy15742 254 LQGDVVFLSPPWG 266 (342)
Q Consensus 254 ~~~D~Ii~nPP~~ 266 (342)
+..|++|.|.-..
T Consensus 105 g~id~lv~nAg~~ 117 (269)
T 4dmm_A 105 GRLDVLVNNAGIT 117 (269)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3789999986543
No 399
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=77.68 E-value=3.7 Score=37.16 Aligned_cols=44 Identities=25% Similarity=0.302 Sum_probs=36.0
Q ss_pred hcCCCCeEEeccCCC-cHHHHHHHHh--CCEEEEEeCCHHHHHHHHH
Q psy15742 186 RCKASDVVIDGFCGC-GGNTIQFAAV--CQKVISIDIDPAKLRLAQH 229 (342)
Q Consensus 186 ~~~~~~~vLDlgcGt-G~~~~~~a~~--~~~v~gvD~s~~~l~~a~~ 229 (342)
.+++|++|+-.|+|. |..++.+|+. +.+|+++|.+++.++.+++
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~ 214 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE 214 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 457889999998864 7777777774 7899999999999888764
No 400
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=77.59 E-value=8.6 Score=33.45 Aligned_cols=74 Identities=12% Similarity=-0.127 Sum_probs=53.0
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~ 254 (342)
++++|=.| |+|+++..++ +.|.+|+.++.++..++.....+...+. ++.++.+|+.+.. ..+
T Consensus 28 ~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (270)
T 3ftp_A 28 KQVAIVTG-ASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL--EGRGAVLNVNDATAVDALVESTLKEFG 104 (270)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTC--CCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 55666555 5555555554 4589999999999988888877776664 6788999987642 113
Q ss_pred CccEEEEcCCCC
Q psy15742 255 QGDVVFLSPPWG 266 (342)
Q Consensus 255 ~~D~Ii~nPP~~ 266 (342)
..|++|.|.-..
T Consensus 105 ~iD~lvnnAg~~ 116 (270)
T 3ftp_A 105 ALNVLVNNAGIT 116 (270)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999986543
No 401
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=77.55 E-value=10 Score=33.17 Aligned_cols=73 Identities=15% Similarity=0.083 Sum_probs=50.6
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHc-CCCCcEEEEEccccccC-----------CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVY-GVSHKIQFIQGDFFALA-----------PS 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~-gl~~~i~~~~~D~~~~~-----------~~ 253 (342)
++++|=.| |+|+++..+++ .|.+|++++.++..++.....+... + .++.++.+|+.+.. ..
T Consensus 26 ~k~vlITG-asggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (302)
T 1w6u_A 26 GKVAFITG-GGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG--NKVHAIQCDVRDPDMVQNTVSELIKVA 102 (302)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS--SCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 55666555 55666666654 4899999999998877666655443 4 36899999987642 12
Q ss_pred CCccEEEEcCCC
Q psy15742 254 LQGDVVFLSPPW 265 (342)
Q Consensus 254 ~~~D~Ii~nPP~ 265 (342)
+..|++|.+.-.
T Consensus 103 g~id~li~~Ag~ 114 (302)
T 1w6u_A 103 GHPNIVINNAAG 114 (302)
T ss_dssp CSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 367999988653
No 402
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=77.54 E-value=4.2 Score=36.06 Aligned_cols=74 Identities=15% Similarity=-0.006 Sum_probs=51.9
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~ 254 (342)
++++|=.|+ +|+++..++ +.|.+|+.+|.++..++.+...+...+. .++.++.+|+.+.. ..+
T Consensus 41 ~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 118 (293)
T 3rih_A 41 ARSVLVTGG-TKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGA-GNVIGVRLDVSDPGSCADAARTVVDAFG 118 (293)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSS-SCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC-CcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 556666555 455555554 4589999999999888777777765542 37899999998742 113
Q ss_pred CccEEEEcCCC
Q psy15742 255 QGDVVFLSPPW 265 (342)
Q Consensus 255 ~~D~Ii~nPP~ 265 (342)
..|++|.|.-.
T Consensus 119 ~iD~lvnnAg~ 129 (293)
T 3rih_A 119 ALDVVCANAGI 129 (293)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999988643
No 403
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=77.43 E-value=3.2 Score=37.96 Aligned_cols=45 Identities=24% Similarity=0.231 Sum_probs=36.4
Q ss_pred hcCCCCeEEeccCCC-cHHHHHHHHh-CCE-EEEEeCCHHHHHHHHHH
Q psy15742 186 RCKASDVVIDGFCGC-GGNTIQFAAV-CQK-VISIDIDPAKLRLAQHN 230 (342)
Q Consensus 186 ~~~~~~~vLDlgcGt-G~~~~~~a~~-~~~-v~gvD~s~~~l~~a~~n 230 (342)
.+++|++||=.|+|. |..++.+|+. |.+ |+++|.+++.++.+++.
T Consensus 176 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 176 GVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 456788999888864 6777777876 666 99999999999998865
No 404
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=76.96 E-value=11 Score=32.49 Aligned_cols=74 Identities=18% Similarity=-0.005 Sum_probs=52.8
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~ 254 (342)
++++|=.|+ +|+++..++ +.|.+|+.++.+++.++.+...+...+- .++.++.+|+.+.. ..+
T Consensus 10 ~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (262)
T 3pk0_A 10 GRSVVVTGG-TKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS-GKVIGVQTDVSDRAQCDALAGRAVEEFG 87 (262)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSS-SCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-CcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 556665554 555555554 4589999999999998888777766552 37899999987642 113
Q ss_pred CccEEEEcCCC
Q psy15742 255 QGDVVFLSPPW 265 (342)
Q Consensus 255 ~~D~Ii~nPP~ 265 (342)
..|++|.|.-.
T Consensus 88 ~id~lvnnAg~ 98 (262)
T 3pk0_A 88 GIDVVCANAGV 98 (262)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999988643
No 405
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=76.95 E-value=3.8 Score=37.70 Aligned_cols=44 Identities=32% Similarity=0.201 Sum_probs=35.3
Q ss_pred hcCCCCeEEeccCCC-cHHHHHHHHh-CC-EEEEEeCCHHHHHHHHH
Q psy15742 186 RCKASDVVIDGFCGC-GGNTIQFAAV-CQ-KVISIDIDPAKLRLAQH 229 (342)
Q Consensus 186 ~~~~~~~vLDlgcGt-G~~~~~~a~~-~~-~v~gvD~s~~~l~~a~~ 229 (342)
.+++|++||=.|+|. |..++.+|+. |. +|+++|.++...+.+++
T Consensus 179 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 225 (370)
T 4ej6_A 179 GIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEE 225 (370)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 456889999988864 6677777776 66 99999999998888765
No 406
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=76.88 E-value=4.6 Score=36.52 Aligned_cols=43 Identities=28% Similarity=0.271 Sum_probs=36.3
Q ss_pred cCCCCeEEeccC--CCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHH
Q psy15742 187 CKASDVVIDGFC--GCGGNTIQFAAV-CQKVISIDIDPAKLRLAQH 229 (342)
Q Consensus 187 ~~~~~~vLDlgc--GtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~ 229 (342)
++++++||-.|+ |.|..++.+++. |.+|+++|.+++.++.+++
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~ 209 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA 209 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 457899999998 678888888875 8899999999998888764
No 407
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=76.75 E-value=8.7 Score=32.88 Aligned_cols=74 Identities=15% Similarity=0.045 Sum_probs=50.2
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccc--cccC-----------C
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDF--FALA-----------P 252 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~--~~~~-----------~ 252 (342)
++++|=.|+ +|+++..++ +.|.+|+.++.+++.++.+...+...+- .++.++.+|+ .+.. .
T Consensus 12 ~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 12 DRIILVTGA-SDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETG-RQPQWFILDLLTCTSENCQQLAQRIAVN 89 (252)
T ss_dssp TCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-CCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CCceEEEEecccCCHHHHHHHHHHHHHh
Confidence 556666564 455555544 4589999999999988877776655432 2678889998 4321 1
Q ss_pred CCCccEEEEcCCC
Q psy15742 253 SLQGDVVFLSPPW 265 (342)
Q Consensus 253 ~~~~D~Ii~nPP~ 265 (342)
.+..|++|.|.-.
T Consensus 90 ~g~id~lv~nAg~ 102 (252)
T 3f1l_A 90 YPRLDGVLHNAGL 102 (252)
T ss_dssp CSCCSEEEECCCC
T ss_pred CCCCCEEEECCcc
Confidence 2478999988654
No 408
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=76.43 E-value=2.9 Score=41.88 Aligned_cols=74 Identities=23% Similarity=0.228 Sum_probs=49.1
Q ss_pred CeEEeccCCCcHHHHHHHHhC--------------CEEEEEeC---CHHHHHHHHH-----------HHHHcCC------
Q psy15742 191 DVVIDGFCGCGGNTIQFAAVC--------------QKVISIDI---DPAKLRLAQH-----------NASVYGV------ 236 (342)
Q Consensus 191 ~~vLDlgcGtG~~~~~~a~~~--------------~~v~gvD~---s~~~l~~a~~-----------n~~~~gl------ 236 (342)
-+|+|+|-|+|.+.+...+.. .+++++|. +++-+..+-. -+..+..
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 489999999999887775431 35899998 8877763322 1122211
Q ss_pred ----C---CcEEEEEccccccCC------CCCccEEEEcCC
Q psy15742 237 ----S---HKIQFIQGDFFALAP------SLQGDVVFLSPP 264 (342)
Q Consensus 237 ----~---~~i~~~~~D~~~~~~------~~~~D~Ii~nPP 264 (342)
+ -.+++..+|+.+.++ ...+|+++.|+.
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f 188 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGF 188 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCS
T ss_pred EEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCC
Confidence 0 135567788876543 357999999973
No 409
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=76.39 E-value=13 Score=31.74 Aligned_cols=73 Identities=15% Similarity=0.009 Sum_probs=51.4
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----------CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----------SL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----------~~ 254 (342)
++++|=.| |+|+++..+++ .|.+|+.++.+++.++.+.+.+...+. ++.++.+|+.+... .+
T Consensus 7 ~k~~lVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 7 GKVALITG-ASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA--KVHVLELDVADRQGVDAAVASTVEALG 83 (247)
T ss_dssp TCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 55666655 45666655544 589999999999888777766665553 68899999876421 13
Q ss_pred CccEEEEcCCC
Q psy15742 255 QGDVVFLSPPW 265 (342)
Q Consensus 255 ~~D~Ii~nPP~ 265 (342)
..|++|.|.-.
T Consensus 84 ~id~lv~nAg~ 94 (247)
T 2jah_A 84 GLDILVNNAGI 94 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999988643
No 410
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=76.27 E-value=13 Score=31.70 Aligned_cols=73 Identities=16% Similarity=0.113 Sum_probs=51.5
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----------CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----------SL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----------~~ 254 (342)
++++|=.| |+|+++..+++ .|.+|+.++.++..++...+.++..+. ++.++.+|+.+... .+
T Consensus 13 ~k~vlItG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (260)
T 3awd_A 13 NRVAIVTG-GAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH--DVSSVVMDVTNTESVQNAVRSVHEQEG 89 (260)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 55666555 56766666654 489999999999877766666665543 68999999876421 13
Q ss_pred CccEEEEcCCC
Q psy15742 255 QGDVVFLSPPW 265 (342)
Q Consensus 255 ~~D~Ii~nPP~ 265 (342)
..|++|.+.-.
T Consensus 90 ~id~vi~~Ag~ 100 (260)
T 3awd_A 90 RVDILVACAGI 100 (260)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987643
No 411
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=76.00 E-value=11 Score=32.87 Aligned_cols=75 Identities=13% Similarity=-0.075 Sum_probs=54.0
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEcccccc-C-----------CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL-A-----------PS 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~-~-----------~~ 253 (342)
++++|=.|+ +|+++..+++ .|.+|+.++.+....+.+...+...+- .++.++.+|+.+. . ..
T Consensus 12 ~k~vlITGa-s~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 12 RRCAVVTGG-NKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNH-ENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp CCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-CSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CcEEEEecC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 556665554 5666665554 489999999999988887777765543 3789999999875 2 01
Q ss_pred CCccEEEEcCCCC
Q psy15742 254 LQGDVVFLSPPWG 266 (342)
Q Consensus 254 ~~~D~Ii~nPP~~ 266 (342)
+..|++|.|.-..
T Consensus 90 g~iD~lv~nAg~~ 102 (311)
T 3o26_A 90 GKLDILVNNAGVA 102 (311)
T ss_dssp SSCCEEEECCCCC
T ss_pred CCCCEEEECCccc
Confidence 4789999987654
No 412
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=75.90 E-value=6.9 Score=34.49 Aligned_cols=70 Identities=21% Similarity=0.132 Sum_probs=49.2
Q ss_pred CCeEEeccCCCcH---HHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCCC
Q psy15742 190 SDVVIDGFCGCGG---NTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSLQ 255 (342)
Q Consensus 190 ~~~vLDlgcGtG~---~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~~ 255 (342)
|+++|=-|++.|. .+..+++.|.+|+.+|.+.+.++.+.+.+ | .++..+.+|+.+.. .-++
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 103 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G--GGAVGIQADSANLAELDRLYEKVKAEAGR 103 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C--TTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C--CCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 6677777766553 34444556999999999999887765544 3 36788899987642 1247
Q ss_pred ccEEEEcCC
Q psy15742 256 GDVVFLSPP 264 (342)
Q Consensus 256 ~D~Ii~nPP 264 (342)
.|++|.|--
T Consensus 104 iDiLVNNAG 112 (273)
T 4fgs_A 104 IDVLFVNAG 112 (273)
T ss_dssp EEEEEECCC
T ss_pred CCEEEECCC
Confidence 899998853
No 413
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=75.79 E-value=12 Score=32.00 Aligned_cols=71 Identities=18% Similarity=0.047 Sum_probs=49.2
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~ 254 (342)
++++|=.| |+|+++..++ +.|.+|+.+|.+++.++.....+ + .++.++.+|+.+.. ..+
T Consensus 8 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 8 GKSALITG-SARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---G--PAAYAVQMDVTRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TCEEEEET-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C--TTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C--CCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 55677655 4555555554 45899999999998776655544 2 36889999987642 123
Q ss_pred CccEEEEcCCCC
Q psy15742 255 QGDVVFLSPPWG 266 (342)
Q Consensus 255 ~~D~Ii~nPP~~ 266 (342)
..|++|.|.-..
T Consensus 82 ~id~lv~~Ag~~ 93 (259)
T 4e6p_A 82 GLDILVNNAALF 93 (259)
T ss_dssp SCCEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 789999986644
No 414
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=75.72 E-value=4.8 Score=36.40 Aligned_cols=44 Identities=30% Similarity=0.347 Sum_probs=35.9
Q ss_pred hcCCCCeEEeccCC-CcHHHHHHHHh-CCEEEEEeCCHHHHHHHHH
Q psy15742 186 RCKASDVVIDGFCG-CGGNTIQFAAV-CQKVISIDIDPAKLRLAQH 229 (342)
Q Consensus 186 ~~~~~~~vLDlgcG-tG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~ 229 (342)
.+++|++||-.|+| .|..++.+|+. |.+|+++|.++..++.+++
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 206 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE 206 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 46678999999986 57777777775 8899999999998887753
No 415
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=75.62 E-value=2.4 Score=38.43 Aligned_cols=43 Identities=16% Similarity=0.270 Sum_probs=36.0
Q ss_pred cCCCCeEEeccCC--CcHHHHHHHHh-CCEEEEEeCCHHHHHHHHH
Q psy15742 187 CKASDVVIDGFCG--CGGNTIQFAAV-CQKVISIDIDPAKLRLAQH 229 (342)
Q Consensus 187 ~~~~~~vLDlgcG--tG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~ 229 (342)
+++|++||-.|+| .|..++.+|+. |.+|+++|.+++.++.+++
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 187 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR 187 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 4678999999987 67778888775 8899999999988888775
No 416
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=75.15 E-value=7.5 Score=33.93 Aligned_cols=72 Identities=19% Similarity=0.126 Sum_probs=49.0
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~ 254 (342)
++++|=.| |+|+++..+++ .|.+|+.+|.+++.++.....+...+ ++.++.+|+.+.. ..+
T Consensus 29 ~k~vlVTG-as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (276)
T 2b4q_A 29 GRIALVTG-GSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG---DCQAIPADLSSEAGARRLAQALGELSA 104 (276)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS---CEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred CCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---ceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 55666555 45666655544 48999999999987776665554332 6788889987642 124
Q ss_pred CccEEEEcCCC
Q psy15742 255 QGDVVFLSPPW 265 (342)
Q Consensus 255 ~~D~Ii~nPP~ 265 (342)
..|++|.|.-.
T Consensus 105 ~iD~lvnnAg~ 115 (276)
T 2b4q_A 105 RLDILVNNAGT 115 (276)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999988643
No 417
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=74.99 E-value=7.4 Score=33.61 Aligned_cols=77 Identities=8% Similarity=-0.116 Sum_probs=55.6
Q ss_pred CCeEEeccCCC--c--H-HHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CC
Q psy15742 190 SDVVIDGFCGC--G--G-NTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PS 253 (342)
Q Consensus 190 ~~~vLDlgcGt--G--~-~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~ 253 (342)
|+++|=-|+++ | . .+..+++.|.+|+.+|.+++.++.+.+-++..+- .++.++.+|+.+.. .-
T Consensus 6 gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 6 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQ-PEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTC-SSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 77888878543 3 2 4555666799999999999888888777766543 36888999987642 12
Q ss_pred CCccEEEEcCCCCC
Q psy15742 254 LQGDVVFLSPPWGG 267 (342)
Q Consensus 254 ~~~D~Ii~nPP~~~ 267 (342)
+..|+++.|--+..
T Consensus 85 G~iD~lvnnAg~~~ 98 (256)
T 4fs3_A 85 GNIDGVYHSIAFAN 98 (256)
T ss_dssp CCCSEEEECCCCCC
T ss_pred CCCCEEEecccccc
Confidence 47899999866544
No 418
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=74.82 E-value=2.7 Score=38.57 Aligned_cols=43 Identities=14% Similarity=0.033 Sum_probs=34.1
Q ss_pred cCCCCeEEeccCCC-cHHHHHHHHh-CC-EEEEEeCCHHHHHHHHH
Q psy15742 187 CKASDVVIDGFCGC-GGNTIQFAAV-CQ-KVISIDIDPAKLRLAQH 229 (342)
Q Consensus 187 ~~~~~~vLDlgcGt-G~~~~~~a~~-~~-~v~gvD~s~~~l~~a~~ 229 (342)
+++|++||-.|+|. |..++.+|+. |. +|+++|.+++.++.+++
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 56789999999763 6677777775 76 89999999988887763
No 419
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=74.61 E-value=13 Score=31.87 Aligned_cols=73 Identities=15% Similarity=0.091 Sum_probs=51.0
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~ 254 (342)
++++|=.|+ +|+++..+++ .|.+|+.++.+++.++.....+...+. ++.++.+|+.+.. ..+
T Consensus 7 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 7 GKVCLVTGA-GGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV--EARSYVCDVTSEEAVIGTVDSVVRDFG 83 (262)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTS--CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 556665554 5566655554 489999999999888777666655443 6889999987642 013
Q ss_pred CccEEEEcCCC
Q psy15742 255 QGDVVFLSPPW 265 (342)
Q Consensus 255 ~~D~Ii~nPP~ 265 (342)
..|++|.|.-.
T Consensus 84 ~id~lv~nAg~ 94 (262)
T 1zem_A 84 KIDFLFNNAGY 94 (262)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999998643
No 420
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=74.54 E-value=15 Score=31.65 Aligned_cols=75 Identities=15% Similarity=-0.022 Sum_probs=50.6
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----------CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----------SL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----------~~ 254 (342)
++++|=.|+ +|+++..+++ .|.+|+.++.+++.++.+...+.......++.++.+|+.+... .+
T Consensus 13 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 91 (267)
T 1iy8_A 13 DRVVLITGG-GSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 91 (267)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 556666554 5666555544 5899999999998887766666544111368899999876420 13
Q ss_pred CccEEEEcCCC
Q psy15742 255 QGDVVFLSPPW 265 (342)
Q Consensus 255 ~~D~Ii~nPP~ 265 (342)
..|++|.|.-.
T Consensus 92 ~id~lv~nAg~ 102 (267)
T 1iy8_A 92 RIDGFFNNAGI 102 (267)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 68999988543
No 421
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=74.53 E-value=2.8 Score=38.51 Aligned_cols=43 Identities=16% Similarity=0.205 Sum_probs=34.0
Q ss_pred cCCCCeEEeccCCC-cHHHHHHHHh-CC-EEEEEeCCHHHHHHHHH
Q psy15742 187 CKASDVVIDGFCGC-GGNTIQFAAV-CQ-KVISIDIDPAKLRLAQH 229 (342)
Q Consensus 187 ~~~~~~vLDlgcGt-G~~~~~~a~~-~~-~v~gvD~s~~~l~~a~~ 229 (342)
+++|++||-.|+|. |..++.+|+. |. +|+++|.+++.++.+++
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 235 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV 235 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 46788999998763 6677777775 66 89999999998887763
No 422
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=74.46 E-value=14 Score=31.55 Aligned_cols=74 Identities=14% Similarity=-0.065 Sum_probs=51.3
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeC-CHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----------C
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDI-DPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----------S 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~-s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----------~ 253 (342)
++++|=.| |+|+++..+++ .|.+|++++. ++..++.....+...+. ++.++.+|+.+... -
T Consensus 21 ~k~vlItG-asggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 21 GKVALTTG-AGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA--QGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 55677554 56777766655 4899999998 88777766666665553 68899999876421 1
Q ss_pred CCccEEEEcCCCC
Q psy15742 254 LQGDVVFLSPPWG 266 (342)
Q Consensus 254 ~~~D~Ii~nPP~~ 266 (342)
+..|++|.+.-..
T Consensus 98 ~~~d~vi~~Ag~~ 110 (274)
T 1ja9_A 98 GGLDFVMSNSGME 110 (274)
T ss_dssp SCEEEEECCCCCC
T ss_pred CCCCEEEECCCCC
Confidence 2689999876543
No 423
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=74.41 E-value=2.6 Score=38.52 Aligned_cols=70 Identities=16% Similarity=0.077 Sum_probs=46.7
Q ss_pred hcCCCCeEEeccCC-CcHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEc----cccccCCCCCccEE
Q psy15742 186 RCKASDVVIDGFCG-CGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQG----DFFALAPSLQGDVV 259 (342)
Q Consensus 186 ~~~~~~~vLDlgcG-tG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~----D~~~~~~~~~~D~I 259 (342)
.+++|++||-.|+| .|..++.+|+. |.+|+++|.+++.++.+++ .|.+ .++.. |..+... ..+|+|
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~v~~~~~~~~~~~~~~-~~~D~v 247 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK----MGAD---HYIATLEEGDWGEKYF-DTFDLI 247 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTCS---EEEEGGGTSCHHHHSC-SCEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----cCCC---EEEcCcCchHHHHHhh-cCCCEE
Confidence 45678999999985 36677777775 8899999999988888765 3542 22222 2211112 469998
Q ss_pred EEcC
Q psy15742 260 FLSP 263 (342)
Q Consensus 260 i~nP 263 (342)
+-.-
T Consensus 248 id~~ 251 (360)
T 1piw_A 248 VVCA 251 (360)
T ss_dssp EECC
T ss_pred EECC
Confidence 8643
No 424
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=74.40 E-value=14 Score=32.19 Aligned_cols=75 Identities=16% Similarity=0.039 Sum_probs=52.8
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEEEccccccCC-----------C
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVS-HKIQFIQGDFFALAP-----------S 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~-~~i~~~~~D~~~~~~-----------~ 253 (342)
++++|=.|+ +|+++..++ +.|.+|+.+|.+++.++.+.+.+...+.. .++.++.+|+.+... .
T Consensus 11 ~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (281)
T 3svt_A 11 DRTYLVTGG-GSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH 89 (281)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 556666565 555555544 45899999999999888887777765432 268899999876421 1
Q ss_pred CCccEEEEcCCC
Q psy15742 254 LQGDVVFLSPPW 265 (342)
Q Consensus 254 ~~~D~Ii~nPP~ 265 (342)
+..|++|.|.-.
T Consensus 90 g~id~lv~nAg~ 101 (281)
T 3svt_A 90 GRLHGVVHCAGG 101 (281)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 368999988653
No 425
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=74.16 E-value=13 Score=31.89 Aligned_cols=71 Identities=15% Similarity=0.026 Sum_probs=50.5
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC----------C--C
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA----------P--S 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~----------~--~ 253 (342)
++++|=.| |+|+++..+++ .|.+|+.++.++..++.+...+...+ .++.++.+|+.+.. . .
T Consensus 5 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 81 (260)
T 2qq5_A 5 GQVCVVTG-ASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG--GQCVPVVCDSSQESEVRSLFEQVDREQQ 81 (260)
T ss_dssp TCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS--SEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC--CceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 55666555 55666666554 48999999999988877666665544 37889999987642 0 3
Q ss_pred CCccEEEEcC
Q psy15742 254 LQGDVVFLSP 263 (342)
Q Consensus 254 ~~~D~Ii~nP 263 (342)
+..|++|.|.
T Consensus 82 g~id~lvnnA 91 (260)
T 2qq5_A 82 GRLDVLVNNA 91 (260)
T ss_dssp TCCCEEEECC
T ss_pred CCceEEEECC
Confidence 4689999886
No 426
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=74.04 E-value=9.8 Score=33.32 Aligned_cols=70 Identities=17% Similarity=0.032 Sum_probs=48.3
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-------CCCCccE
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-------PSLQGDV 258 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-------~~~~~D~ 258 (342)
++++|=.| |+|+++..+++ .|.+|+.++.++...+.+...+ ..++.++.+|+.+.. .-+..|+
T Consensus 16 gk~vlVTG-as~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~ 89 (291)
T 3rd5_A 16 QRTVVITG-ANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSVRRFADGVSGADV 89 (291)
T ss_dssp TCEEEEEC-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHHHHHHHHTCCCEEE
T ss_pred CCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHHHHHHHHhcCCCCE
Confidence 55666555 55666666554 4899999999998776554433 247899999987642 1247899
Q ss_pred EEEcCCC
Q psy15742 259 VFLSPPW 265 (342)
Q Consensus 259 Ii~nPP~ 265 (342)
+|.|.-.
T Consensus 90 lv~nAg~ 96 (291)
T 3rd5_A 90 LINNAGI 96 (291)
T ss_dssp EEECCCC
T ss_pred EEECCcC
Confidence 9988654
No 427
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=73.83 E-value=4.5 Score=37.65 Aligned_cols=43 Identities=21% Similarity=0.126 Sum_probs=34.1
Q ss_pred cCCCCeEEeccCCC-cHHHHHHHHh-CC-EEEEEeCCHHHHHHHHH
Q psy15742 187 CKASDVVIDGFCGC-GGNTIQFAAV-CQ-KVISIDIDPAKLRLAQH 229 (342)
Q Consensus 187 ~~~~~~vLDlgcGt-G~~~~~~a~~-~~-~v~gvD~s~~~l~~a~~ 229 (342)
+++|++||=.|+|. |..++.+|+. |. +|+++|.++..++.+++
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~ 256 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE 256 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 56788999888753 6667777775 66 99999999999988864
No 428
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=73.67 E-value=3 Score=38.22 Aligned_cols=43 Identities=23% Similarity=0.190 Sum_probs=34.0
Q ss_pred cCCCCeEEeccCCC-cHHHHHHHHh-CC-EEEEEeCCHHHHHHHHH
Q psy15742 187 CKASDVVIDGFCGC-GGNTIQFAAV-CQ-KVISIDIDPAKLRLAQH 229 (342)
Q Consensus 187 ~~~~~~vLDlgcGt-G~~~~~~a~~-~~-~v~gvD~s~~~l~~a~~ 229 (342)
+++|++||-.|+|. |..++.+|+. |. +|+++|.+++.++.+++
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~ 233 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE 233 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 46788999998763 6667777775 76 89999999998888764
No 429
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=73.65 E-value=15 Score=31.94 Aligned_cols=74 Identities=22% Similarity=0.029 Sum_probs=51.6
Q ss_pred CCeEEeccCCCcHHHHHH----HHhCCEEEEEeC-------------CHHHHHHHHHHHHHcCCCCcEEEEEccccccC-
Q psy15742 190 SDVVIDGFCGCGGNTIQF----AAVCQKVISIDI-------------DPAKLRLAQHNASVYGVSHKIQFIQGDFFALA- 251 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~----a~~~~~v~gvD~-------------s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~- 251 (342)
++++|=.|++ |+++..+ ++.|.+|+.+|. +++.++.+.+.+...+. ++.++.+|+.+..
T Consensus 15 gk~~lVTGas-~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 15 GRVAFITGAA-RGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR--KALTRVLDVRDDAA 91 (280)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTC--CEEEEECCTTCHHH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC--eEEEEEcCCCCHHH
Confidence 5566665555 5555554 445999999998 77888777777766553 7889999987642
Q ss_pred ----------CCCCccEEEEcCCCC
Q psy15742 252 ----------PSLQGDVVFLSPPWG 266 (342)
Q Consensus 252 ----------~~~~~D~Ii~nPP~~ 266 (342)
..+..|++|.|.-..
T Consensus 92 v~~~~~~~~~~~g~id~lvnnAg~~ 116 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANAGVL 116 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 113789999986543
No 430
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=73.22 E-value=7.1 Score=34.22 Aligned_cols=73 Identities=16% Similarity=-0.010 Sum_probs=51.5
Q ss_pred CCeEEeccCCCcHHHHHH----HHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQF----AAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~----a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~ 254 (342)
++++|=.|++ |+++..+ ++.|.+|+.+|.++..++.+...+...+ .++.++.+|+.+.. ..+
T Consensus 8 gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 84 (280)
T 3tox_A 8 GKIAIVTGAS-SGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGG--GEAAALAGDVGDEALHEALVELAVRRFG 84 (280)
T ss_dssp TCEEEESSTT-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTT--CCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5566666654 5555544 4458999999999998887777765544 37889999987642 113
Q ss_pred CccEEEEcCCC
Q psy15742 255 QGDVVFLSPPW 265 (342)
Q Consensus 255 ~~D~Ii~nPP~ 265 (342)
..|++|.|.-.
T Consensus 85 ~iD~lvnnAg~ 95 (280)
T 3tox_A 85 GLDTAFNNAGA 95 (280)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999988653
No 431
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=73.07 E-value=3.2 Score=38.12 Aligned_cols=42 Identities=19% Similarity=0.148 Sum_probs=33.5
Q ss_pred cCCCCeEEeccCCC-cHHHHHHHHh-CC-EEEEEeCCHHHHHHHH
Q psy15742 187 CKASDVVIDGFCGC-GGNTIQFAAV-CQ-KVISIDIDPAKLRLAQ 228 (342)
Q Consensus 187 ~~~~~~vLDlgcGt-G~~~~~~a~~-~~-~v~gvD~s~~~l~~a~ 228 (342)
+++|++||-.|+|. |..++.+|+. |. +|+++|.+++.++.++
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~ 233 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK 233 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 46788999998764 6667777775 66 8999999998888775
No 432
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=72.95 E-value=11 Score=32.09 Aligned_cols=71 Identities=10% Similarity=-0.075 Sum_probs=48.6
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~ 254 (342)
++++|=.|++ |+++..++ +.|.+|+.++.++..++...+.+. .+..++.+|+.+.. ..+
T Consensus 9 gk~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 9 GKVALVTGAS-RGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG-----DNGKGMALNVTNPESIEAVLKAITDEFG 82 (248)
T ss_dssp TCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----ccceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 5566666654 55555544 458999999999988776665543 25678889987642 113
Q ss_pred CccEEEEcCCCC
Q psy15742 255 QGDVVFLSPPWG 266 (342)
Q Consensus 255 ~~D~Ii~nPP~~ 266 (342)
..|++|.|.-..
T Consensus 83 ~iD~lv~nAg~~ 94 (248)
T 3op4_A 83 GVDILVNNAGIT 94 (248)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 789999986543
No 433
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=72.93 E-value=17 Score=31.03 Aligned_cols=72 Identities=8% Similarity=-0.023 Sum_probs=50.4
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----------CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----------SL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----------~~ 254 (342)
++++|=.| |+|+++..+++ .|.+|+.++.+++.++.....+...+. ++.++.+|+.+... .+
T Consensus 14 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g 90 (260)
T 2zat_A 14 NKVALVTA-STDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL--SVTGTVCHVGKAEDRERLVAMAVNLHG 90 (260)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 55666555 56666666554 489999999999887776666655553 68889999876420 13
Q ss_pred CccEEEEcCC
Q psy15742 255 QGDVVFLSPP 264 (342)
Q Consensus 255 ~~D~Ii~nPP 264 (342)
..|++|.|.-
T Consensus 91 ~iD~lv~~Ag 100 (260)
T 2zat_A 91 GVDILVSNAA 100 (260)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899998854
No 434
>2qrv_B DNA (cytosine-5)-methyltransferase 3-like; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=72.93 E-value=2.7 Score=36.13 Aligned_cols=59 Identities=12% Similarity=-0.097 Sum_probs=38.0
Q ss_pred CCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----CCCccEEEEcCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----SLQGDVVFLSPP 264 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----~~~~D~Ii~nPP 264 (342)
..+++|++||.|+ + +.+.|..+ +.|. . ...++.+|+.++.. .+.+|+|+.-||
T Consensus 33 ~~~vidLFaGig~-G--l~~aGf~~-------------~~N~-----~-~~~~~~~DI~~i~~~~i~~~~~~DlliGG~P 90 (230)
T 2qrv_B 33 PVRVLSLFEDIKK-E--LTSLGFLE-------------SGSD-----P-GQLKHVVDVTDTVRKDVEEWGPFDLVYGATP 90 (230)
T ss_dssp CCCEEEESSCCTT-T--TTTTTSCC------------------------CCEEEESCCTTCCHHHHHHTCCCSEEEEECC
T ss_pred CceEEEeccChhH-H--HHHCCCch-------------hhcC-----C-CCcEecCChhhCCHhHhcccCCCCEEEECCC
Confidence 4579999999886 2 33345543 1221 1 23467899988742 246899999999
Q ss_pred CCCCcc
Q psy15742 265 WGGPEY 270 (342)
Q Consensus 265 ~~~~~~ 270 (342)
+.+.+.
T Consensus 91 CQ~FS~ 96 (230)
T 2qrv_B 91 PLGHTC 96 (230)
T ss_dssp CTTTSS
T ss_pred CCcccc
Confidence 987654
No 435
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=72.81 E-value=15 Score=31.99 Aligned_cols=71 Identities=15% Similarity=0.135 Sum_probs=50.4
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC------C-----CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA------P-----SL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~------~-----~~ 254 (342)
++++|=.| |+|+++..+++ .|.+|++++.++..++.....+...+- .++.++.+|+.+.. . .+
T Consensus 28 ~k~vlITG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 28 GKKVIVTG-ASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA-ASAHYIAGTMEDMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-SEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-CceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 56777555 55666666554 489999999999888777666655443 36889999987642 0 13
Q ss_pred CccEEEEc
Q psy15742 255 QGDVVFLS 262 (342)
Q Consensus 255 ~~D~Ii~n 262 (342)
..|++|.|
T Consensus 106 ~iD~li~n 113 (286)
T 1xu9_A 106 GLDMLILN 113 (286)
T ss_dssp SCSEEEEC
T ss_pred CCCEEEEC
Confidence 68999987
No 436
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase-DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=72.65 E-value=1.9 Score=37.80 Aligned_cols=48 Identities=17% Similarity=0.298 Sum_probs=37.2
Q ss_pred HHHHHHHHhcCCCCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHH
Q psy15742 178 KVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQ 228 (342)
Q Consensus 178 ~~~~~i~~~~~~~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~ 228 (342)
.++..|...+++..+.+|++||+|++...+. .. ++..|+++..+..-+
T Consensus 13 ~l~~~i~~~lP~~~~yvEpF~GggaV~~~~~--~~-~viNDin~~li~~~~ 60 (259)
T 1yf3_A 13 SLLPELKSHFPKYNRFVDLFCGGLSVSLNVN--GP-VLANDIQEPIIEMYK 60 (259)
T ss_dssp TTHHHHHHTCCCCSEEEETTCTTCTTGGGSC--SS-EEEECSCHHHHHHHH
T ss_pred HHHHHHHHhCcccCeEEEecCCccHHHHhcc--cc-EEEecCChHHHHHHH
Confidence 4556677777777899999999999877653 24 899999999886543
No 437
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=72.65 E-value=3.3 Score=38.04 Aligned_cols=43 Identities=21% Similarity=0.183 Sum_probs=33.9
Q ss_pred cCCCCeEEeccCC-CcHHHHHHHHh-CC-EEEEEeCCHHHHHHHHH
Q psy15742 187 CKASDVVIDGFCG-CGGNTIQFAAV-CQ-KVISIDIDPAKLRLAQH 229 (342)
Q Consensus 187 ~~~~~~vLDlgcG-tG~~~~~~a~~-~~-~v~gvD~s~~~l~~a~~ 229 (342)
+++|++||-.|+| .|..++.+|+. |. +|+++|.+++.++.+++
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 238 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA 238 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 4578899999876 36677777775 66 89999999988887753
No 438
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=72.44 E-value=3.8 Score=36.91 Aligned_cols=42 Identities=21% Similarity=0.165 Sum_probs=34.3
Q ss_pred cCCCCeEEeccC--CCcHHHHHHHHh-CCEEEEEeCCHHHHHHHH
Q psy15742 187 CKASDVVIDGFC--GCGGNTIQFAAV-CQKVISIDIDPAKLRLAQ 228 (342)
Q Consensus 187 ~~~~~~vLDlgc--GtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~ 228 (342)
+++|++||-.|+ |.|..++.+++. |.+|+++|.+++.++.+.
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 191 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLV 191 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 567899999998 467777777765 889999999998887763
No 439
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=72.30 E-value=6.7 Score=35.80 Aligned_cols=44 Identities=16% Similarity=0.079 Sum_probs=36.6
Q ss_pred hcCCCCeEEecc--CCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHH
Q psy15742 186 RCKASDVVIDGF--CGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQH 229 (342)
Q Consensus 186 ~~~~~~~vLDlg--cGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~ 229 (342)
.+++|++||-.| .|.|..++.+|+. |.+|++++.+++.++.+++
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~ 206 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS 206 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence 356789999998 5678888888876 8899999999988887764
No 440
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=72.30 E-value=7.5 Score=33.41 Aligned_cols=75 Identities=9% Similarity=-0.145 Sum_probs=50.0
Q ss_pred CCCeEEeccCC-CcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------C
Q psy15742 189 ASDVVIDGFCG-CGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------P 252 (342)
Q Consensus 189 ~~~~vLDlgcG-tG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~ 252 (342)
+++++|=.|++ +|+++..++ +.|.+|+.++.+....+.+++-....+ ++.++.+|+.+.. .
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~ 89 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG---SELVFPCDVADDAQIDALFASLKTH 89 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC---CcEEEECCCCCHHHHHHHHHHHHHH
Confidence 36788888864 355555554 458999999988655555554444433 4778999987642 1
Q ss_pred CCCccEEEEcCCCC
Q psy15742 253 SLQGDVVFLSPPWG 266 (342)
Q Consensus 253 ~~~~D~Ii~nPP~~ 266 (342)
.+..|++|.|.-..
T Consensus 90 ~g~id~lv~nAg~~ 103 (271)
T 3ek2_A 90 WDSLDGLVHSIGFA 103 (271)
T ss_dssp CSCEEEEEECCCCC
T ss_pred cCCCCEEEECCccC
Confidence 24789999986543
No 441
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=72.30 E-value=18 Score=30.28 Aligned_cols=74 Identities=16% Similarity=0.030 Sum_probs=51.2
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHH-HcCCCCcEEEEEccccccC------CC-----
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNAS-VYGVSHKIQFIQGDFFALA------PS----- 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~-~~gl~~~i~~~~~D~~~~~------~~----- 253 (342)
++++|=.| |+|+++..+++ .|.+|+.++.+++.++.+.+.+. ..+. ++.++.+|+.+.. ..
T Consensus 2 ~k~vlITG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 2 MKVAVITG-ASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV--EVFYHHLDVSKAESVEEFSKKVLERF 78 (235)
T ss_dssp CCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC--eEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 44566555 45666655554 48999999999988877766664 3443 7899999987642 11
Q ss_pred CCccEEEEcCCCC
Q psy15742 254 LQGDVVFLSPPWG 266 (342)
Q Consensus 254 ~~~D~Ii~nPP~~ 266 (342)
+..|++|.|.-..
T Consensus 79 g~id~li~~Ag~~ 91 (235)
T 3l77_A 79 GDVDVVVANAGLG 91 (235)
T ss_dssp SSCSEEEECCCCC
T ss_pred CCCCEEEECCccc
Confidence 3789999986543
No 442
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=72.26 E-value=7.1 Score=31.59 Aligned_cols=65 Identities=18% Similarity=0.094 Sum_probs=41.6
Q ss_pred CCeEEeccCCCcHHHHHH----HHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEcccccc-----C-CCCCccE
Q psy15742 190 SDVVIDGFCGCGGNTIQF----AAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL-----A-PSLQGDV 258 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~----a~~-~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~-----~-~~~~~D~ 258 (342)
+.+|+=+||| .++..+ .+. |..|+++|.+++.++.++. .| +.++.+|..+. . .-..+|+
T Consensus 39 ~~~v~IiG~G--~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~g----~~~~~gd~~~~~~l~~~~~~~~ad~ 108 (183)
T 3c85_A 39 HAQVLILGMG--RIGTGAYDELRARYGKISLGIEIREEAAQQHRS----EG----RNVISGDATDPDFWERILDTGHVKL 108 (183)
T ss_dssp TCSEEEECCS--HHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----TT----CCEEECCTTCHHHHHTBCSCCCCCE
T ss_pred CCcEEEECCC--HHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----CC----CCEEEcCCCCHHHHHhccCCCCCCE
Confidence 4578777665 444444 345 8899999999988766543 23 34667776542 1 1236899
Q ss_pred EEEcCC
Q psy15742 259 VFLSPP 264 (342)
Q Consensus 259 Ii~nPP 264 (342)
|+.--|
T Consensus 109 vi~~~~ 114 (183)
T 3c85_A 109 VLLAMP 114 (183)
T ss_dssp EEECCS
T ss_pred EEEeCC
Confidence 988554
No 443
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=72.22 E-value=4.5 Score=36.35 Aligned_cols=41 Identities=20% Similarity=0.174 Sum_probs=32.5
Q ss_pred cCCCCeEEeccC--CCcHHHHHHHHh-CCEEEEEeCCHHHHHHH
Q psy15742 187 CKASDVVIDGFC--GCGGNTIQFAAV-CQKVISIDIDPAKLRLA 227 (342)
Q Consensus 187 ~~~~~~vLDlgc--GtG~~~~~~a~~-~~~v~gvD~s~~~l~~a 227 (342)
+++|++||-.|| |.|..+..+++. |.+|+++|.+++.++.+
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~ 186 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL 186 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 457889999997 556666666664 88999999999888777
No 444
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=71.88 E-value=5.3 Score=36.78 Aligned_cols=43 Identities=28% Similarity=0.276 Sum_probs=34.2
Q ss_pred cCCCCeEEeccCC-CcHHHHHHHHh-C-CEEEEEeCCHHHHHHHHH
Q psy15742 187 CKASDVVIDGFCG-CGGNTIQFAAV-C-QKVISIDIDPAKLRLAQH 229 (342)
Q Consensus 187 ~~~~~~vLDlgcG-tG~~~~~~a~~-~-~~v~gvD~s~~~l~~a~~ 229 (342)
+++|++||-.|+| .|..++.+|+. | .+|+++|.+++.++.+++
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~ 238 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE 238 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH
Confidence 5678899999965 46667777776 7 699999999998888763
No 445
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=71.85 E-value=8.3 Score=33.61 Aligned_cols=73 Identities=12% Similarity=0.069 Sum_probs=46.2
Q ss_pred CCeEEeccCCCcHHHHHH----HHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC----------CCCC
Q psy15742 190 SDVVIDGFCGCGGNTIQF----AAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA----------PSLQ 255 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~----a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~----------~~~~ 255 (342)
++++|=.|++ |+++..+ ++.|.+|+.+|.++. .+.....+...+ .++.++.+|+.+.. ..+.
T Consensus 31 gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~g~ 106 (273)
T 3uf0_A 31 GRTAVVTGAG-SGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGG--GSAEAVVADLADLEGAANVAEELAATRR 106 (273)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSTH-HHHHHHHHHTTT--CEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEcCHHH-HHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHhcCC
Confidence 5667766654 5555444 445899999996644 333334444333 37889999987642 1147
Q ss_pred ccEEEEcCCCC
Q psy15742 256 GDVVFLSPPWG 266 (342)
Q Consensus 256 ~D~Ii~nPP~~ 266 (342)
.|++|.|.-..
T Consensus 107 iD~lv~nAg~~ 117 (273)
T 3uf0_A 107 VDVLVNNAGII 117 (273)
T ss_dssp CCEEEECCCCC
T ss_pred CcEEEECCCCC
Confidence 89999986543
No 446
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=71.84 E-value=4.5 Score=36.55 Aligned_cols=43 Identities=19% Similarity=0.087 Sum_probs=34.5
Q ss_pred cCCCCeEEeccC--CCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHH
Q psy15742 187 CKASDVVIDGFC--GCGGNTIQFAAV-CQKVISIDIDPAKLRLAQH 229 (342)
Q Consensus 187 ~~~~~~vLDlgc--GtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~ 229 (342)
+++|++||-.|+ |.|..++.+++. |.+|+++|.+++.++.+++
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~ 198 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT 198 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 457889999997 467777777765 8899999999988877763
No 447
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=71.57 E-value=15 Score=31.96 Aligned_cols=74 Identities=14% Similarity=0.058 Sum_probs=51.4
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~ 254 (342)
++++|=.| |+|+++..+++ .|.+|+.++.++..++...+.++..+. ++.++.+|+.+.. ..+
T Consensus 44 ~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 120 (285)
T 2c07_A 44 NKVALVTG-AGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY--ESSGYAGDVSKKEEISEVINKILTEHK 120 (285)
T ss_dssp SCEEEEES-TTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC--CEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC--ceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence 45566544 56777777665 388999999998877766666654443 6889999987642 113
Q ss_pred CccEEEEcCCCC
Q psy15742 255 QGDVVFLSPPWG 266 (342)
Q Consensus 255 ~~D~Ii~nPP~~ 266 (342)
..|++|.+.-..
T Consensus 121 ~id~li~~Ag~~ 132 (285)
T 2c07_A 121 NVDILVNNAGIT 132 (285)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999986543
No 448
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=71.40 E-value=18 Score=30.95 Aligned_cols=73 Identities=12% Similarity=0.072 Sum_probs=49.9
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHc-CCCCcEEEEEccccccC------C-----C
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVY-GVSHKIQFIQGDFFALA------P-----S 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~-gl~~~i~~~~~D~~~~~------~-----~ 253 (342)
++++|=.| |+|+++..+++ .|.+|+.++.+++.++.+...+... +. ++.++.+|+.+.. . .
T Consensus 7 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (263)
T 3ai3_A 7 GKVAVITG-SSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV--RVLEVAVDVATPEGVDAVVESVRSSF 83 (263)
T ss_dssp TCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCC--ceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 55666555 55666666554 4899999999998777666555443 43 6889999987642 0 1
Q ss_pred CCccEEEEcCCC
Q psy15742 254 LQGDVVFLSPPW 265 (342)
Q Consensus 254 ~~~D~Ii~nPP~ 265 (342)
+..|++|.|.-.
T Consensus 84 g~id~lv~~Ag~ 95 (263)
T 3ai3_A 84 GGADILVNNAGT 95 (263)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368999988654
No 449
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=71.36 E-value=2.7 Score=38.72 Aligned_cols=42 Identities=26% Similarity=0.199 Sum_probs=33.9
Q ss_pred cCCCCeEEeccCC-CcHHHHHHHHh-CC-EEEEEeCCHHHHHHHH
Q psy15742 187 CKASDVVIDGFCG-CGGNTIQFAAV-CQ-KVISIDIDPAKLRLAQ 228 (342)
Q Consensus 187 ~~~~~~vLDlgcG-tG~~~~~~a~~-~~-~v~gvD~s~~~l~~a~ 228 (342)
+++|++||=.|+| .|..++.+|+. |. +|+++|.+++.++.|+
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~ 235 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK 235 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 4578899999886 47777777776 66 8999999999888775
No 450
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=71.04 E-value=16 Score=31.80 Aligned_cols=75 Identities=9% Similarity=0.072 Sum_probs=50.2
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeC-CHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDI-DPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PS 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~-s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~ 253 (342)
++++|=.|+ +|+++..++ +.|.+|+.++. ++..++.....+.... ..++.++.+|+.+.. ..
T Consensus 25 ~k~~lVTGa-s~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 102 (281)
T 3v2h_A 25 TKTAVITGS-TSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS-SGTVLHHPADMTKPSEIADMMAMVADRF 102 (281)
T ss_dssp TCEEEEETC-SSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC-SSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc-CCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence 556666665 455555554 45899999998 6777766666555432 147889999987642 12
Q ss_pred CCccEEEEcCCCC
Q psy15742 254 LQGDVVFLSPPWG 266 (342)
Q Consensus 254 ~~~D~Ii~nPP~~ 266 (342)
+..|++|.|.-..
T Consensus 103 g~iD~lv~nAg~~ 115 (281)
T 3v2h_A 103 GGADILVNNAGVQ 115 (281)
T ss_dssp SSCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4789999886543
No 451
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=70.91 E-value=3.6 Score=37.31 Aligned_cols=43 Identities=26% Similarity=0.223 Sum_probs=33.9
Q ss_pred cCCCCeEEeccC--CCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHH
Q psy15742 187 CKASDVVIDGFC--GCGGNTIQFAAV-CQKVISIDIDPAKLRLAQH 229 (342)
Q Consensus 187 ~~~~~~vLDlgc--GtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~ 229 (342)
+++|++||-.|+ |.|..++.+++. |.+|+++|.+++.++.+++
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~ 212 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS 212 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH
Confidence 567899999998 466677777764 8899999999888776654
No 452
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=70.81 E-value=8.9 Score=36.19 Aligned_cols=44 Identities=9% Similarity=0.060 Sum_probs=34.6
Q ss_pred CCeEEeccCCCcHHHHHHHHh-------CCEEEEEeCCHHHHHHHHHHHHH
Q psy15742 190 SDVVIDGFCGCGGNTIQFAAV-------CQKVISIDIDPAKLRLAQHNASV 233 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~~-------~~~v~gvD~s~~~l~~a~~n~~~ 233 (342)
.-+|+|+|+|+|.++.-+.+. ..+++.||+|+...+.=++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 358999999999988777542 24799999999887777777654
No 453
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=70.43 E-value=12 Score=32.55 Aligned_cols=71 Identities=15% Similarity=0.030 Sum_probs=48.8
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~ 254 (342)
++++|=.| |+|+++..++ +.|.+|+.+|.+.+.++.+...+ + .++.++.+|+.+.. ..+
T Consensus 28 ~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 101 (272)
T 4dyv_A 28 KKIAIVTG-AGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---G--DDALCVPTDVTDPDSVRALFTATVEKFG 101 (272)
T ss_dssp CCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---T--SCCEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---C--CCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 55666555 4555555554 45899999999998877665554 2 36889999987642 113
Q ss_pred CccEEEEcCCCC
Q psy15742 255 QGDVVFLSPPWG 266 (342)
Q Consensus 255 ~~D~Ii~nPP~~ 266 (342)
..|++|.|.-..
T Consensus 102 ~iD~lVnnAg~~ 113 (272)
T 4dyv_A 102 RVDVLFNNAGTG 113 (272)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 789999986543
No 454
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=70.09 E-value=7.8 Score=34.93 Aligned_cols=44 Identities=34% Similarity=0.317 Sum_probs=33.3
Q ss_pred hcCCCCeEEeccCCCc-HHHHHHHHh--CCEEEEEeCCHHHHHHHHH
Q psy15742 186 RCKASDVVIDGFCGCG-GNTIQFAAV--CQKVISIDIDPAKLRLAQH 229 (342)
Q Consensus 186 ~~~~~~~vLDlgcGtG-~~~~~~a~~--~~~v~gvD~s~~~l~~a~~ 229 (342)
..++|++||=.|+|.+ .+++.+++. +.+|+++|.+++.++.++.
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~ 206 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK 206 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh
Confidence 3567899999998864 455555553 7899999999988777654
No 455
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=70.09 E-value=2.9 Score=37.12 Aligned_cols=43 Identities=21% Similarity=0.291 Sum_probs=34.7
Q ss_pred cCCCCeEEeccC--CCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHH
Q psy15742 187 CKASDVVIDGFC--GCGGNTIQFAAV-CQKVISIDIDPAKLRLAQH 229 (342)
Q Consensus 187 ~~~~~~vLDlgc--GtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~ 229 (342)
+++|++||-.|+ |.|..++.+|+. |.+|+++|.+++.++.+++
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 168 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA 168 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 567899999997 467777777775 8899999999988877753
No 456
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=70.07 E-value=22 Score=30.05 Aligned_cols=74 Identities=12% Similarity=-0.014 Sum_probs=50.8
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeC-CHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----------C
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDI-DPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----------S 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~-s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----------~ 253 (342)
++++|=.| |+|+++..+++ .|.+|+.++. ++..++.+.+.+...+. ++.++.+|+.+... .
T Consensus 4 ~k~vlVTG-as~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T 2uvd_A 4 GKVALVTG-ASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS--DAIAVRADVANAEDVTNMVKQTVDVF 80 (246)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45666554 55666666554 4899999998 88877766666655443 68899999876420 1
Q ss_pred CCccEEEEcCCCC
Q psy15742 254 LQGDVVFLSPPWG 266 (342)
Q Consensus 254 ~~~D~Ii~nPP~~ 266 (342)
+..|++|.|.-..
T Consensus 81 g~id~lv~nAg~~ 93 (246)
T 2uvd_A 81 GQVDILVNNAGVT 93 (246)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689999886543
No 457
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=70.05 E-value=11 Score=32.06 Aligned_cols=73 Identities=16% Similarity=0.039 Sum_probs=50.1
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCC-HHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----------C
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDID-PAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----------S 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s-~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----------~ 253 (342)
++++|= ..|+|+++..+++ .|.+|+.++.+ +..++.....+...+ .++.++.+|+.+... .
T Consensus 7 ~k~vlV-TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (258)
T 3afn_B 7 GKRVLI-TGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG--GDAAFFAADLATSEACQQLVDEFVAKF 83 (258)
T ss_dssp TCEEEE-TTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEE-eCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 556764 4456777766655 48999999998 666666555555444 378899999876421 1
Q ss_pred CCccEEEEcCCC
Q psy15742 254 LQGDVVFLSPPW 265 (342)
Q Consensus 254 ~~~D~Ii~nPP~ 265 (342)
+..|+||.+.-.
T Consensus 84 g~id~vi~~Ag~ 95 (258)
T 3afn_B 84 GGIDVLINNAGG 95 (258)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 268999988653
No 458
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=69.88 E-value=5.7 Score=35.60 Aligned_cols=43 Identities=23% Similarity=0.285 Sum_probs=34.5
Q ss_pred cCCCCeEEecc--CCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHH
Q psy15742 187 CKASDVVIDGF--CGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQH 229 (342)
Q Consensus 187 ~~~~~~vLDlg--cGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~ 229 (342)
+++|++||-.| .|.|..++.+++. |.+|++++.+++.++.+++
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 183 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA 183 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 46788999887 3467777777775 8899999999999888764
No 459
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=69.21 E-value=23 Score=30.65 Aligned_cols=74 Identities=11% Similarity=-0.093 Sum_probs=50.7
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCC------------HHHHHHHHHHHHHcCCCCcEEEEEccccccC--
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDID------------PAKLRLAQHNASVYGVSHKIQFIQGDFFALA-- 251 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s------------~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-- 251 (342)
++++|=.|++ |+++..++ +.|.+|+.+|.+ ...++.....+...+. ++.++.+|+.+..
T Consensus 10 ~k~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v 86 (281)
T 3s55_A 10 GKTALITGGA-RGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGR--RCISAKVDVKDRAAL 86 (281)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHH
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCC--eEEEEeCCCCCHHHH
Confidence 5667766655 55555544 458999999987 6666666666665553 7899999987642
Q ss_pred ---------CCCCccEEEEcCCCC
Q psy15742 252 ---------PSLQGDVVFLSPPWG 266 (342)
Q Consensus 252 ---------~~~~~D~Ii~nPP~~ 266 (342)
..+..|++|.|.-..
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~ 110 (281)
T 3s55_A 87 ESFVAEAEDTLGGIDIAITNAGIS 110 (281)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCCC
Confidence 113789999886543
No 460
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=68.96 E-value=6.7 Score=34.43 Aligned_cols=74 Identities=14% Similarity=-0.040 Sum_probs=49.0
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHH-------HHHHHHHHHHHcCCCCcEEEEEccccccC-------
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPA-------KLRLAQHNASVYGVSHKIQFIQGDFFALA------- 251 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~-------~l~~a~~n~~~~gl~~~i~~~~~D~~~~~------- 251 (342)
++++|=.|++ |+++..++ +.|.+|+.++.+.. .++.+...+...+. ++.++.+|+.+..
T Consensus 9 ~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~ 85 (285)
T 3sc4_A 9 GKTMFISGGS-RGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG--QALPIVGDIRDGDAVAAAVA 85 (285)
T ss_dssp TCEEEEESCS-SHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTS--EEEEEECCTTSHHHHHHHHH
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHH
Confidence 5567766655 55555554 45899999998875 34444555555553 7899999987642
Q ss_pred ----CCCCccEEEEcCCCC
Q psy15742 252 ----PSLQGDVVFLSPPWG 266 (342)
Q Consensus 252 ----~~~~~D~Ii~nPP~~ 266 (342)
..+..|++|.|.-..
T Consensus 86 ~~~~~~g~id~lvnnAg~~ 104 (285)
T 3sc4_A 86 KTVEQFGGIDICVNNASAI 104 (285)
T ss_dssp HHHHHHSCCSEEEECCCCC
T ss_pred HHHHHcCCCCEEEECCCCC
Confidence 113789999886543
No 461
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=68.81 E-value=15 Score=31.69 Aligned_cols=71 Identities=13% Similarity=0.004 Sum_probs=48.5
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----------CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----------SL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----------~~ 254 (342)
++++|=.|+ +|+++..++ +.|.+|+.++.+++.++.....+ + .++.++.+|+.+... .+
T Consensus 27 gk~vlVTGa-s~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (266)
T 3grp_A 27 GRKALVTGA-TGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---G--KDVFVFSANLSDRKSIKQLAEVAEREME 100 (266)
T ss_dssp TCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C--SSEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C--CceEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 556766555 455555554 45899999999998776654433 3 378999999876421 14
Q ss_pred CccEEEEcCCCC
Q psy15742 255 QGDVVFLSPPWG 266 (342)
Q Consensus 255 ~~D~Ii~nPP~~ 266 (342)
..|++|.|.-..
T Consensus 101 ~iD~lvnnAg~~ 112 (266)
T 3grp_A 101 GIDILVNNAGIT 112 (266)
T ss_dssp SCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 789999886543
No 462
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=68.70 E-value=22 Score=30.61 Aligned_cols=74 Identities=16% Similarity=0.073 Sum_probs=50.1
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHH-HHcCCCCcEEEEEccccccC-----------CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNA-SVYGVSHKIQFIQGDFFALA-----------PS 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~-~~~gl~~~i~~~~~D~~~~~-----------~~ 253 (342)
++++|=.| |+|+++..+++ .|.+|+.++.++..++.+...+ ...+. ++.++.+|+.+.. ..
T Consensus 21 ~k~~lVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (267)
T 1vl8_A 21 GRVALVTG-GSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV--ETMAFRCDVSNYEEVKKLLEAVKEKF 97 (267)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC--eEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 55666555 55666666554 4899999999998877666555 33343 6888999987642 01
Q ss_pred CCccEEEEcCCCC
Q psy15742 254 LQGDVVFLSPPWG 266 (342)
Q Consensus 254 ~~~D~Ii~nPP~~ 266 (342)
+..|++|.|--..
T Consensus 98 g~iD~lvnnAg~~ 110 (267)
T 1vl8_A 98 GKLDTVVNAAGIN 110 (267)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 3689999886543
No 463
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=68.64 E-value=11 Score=34.94 Aligned_cols=50 Identities=16% Similarity=0.059 Sum_probs=35.4
Q ss_pred CeEEeccCCCcHHHHHHHHh---------CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEE
Q psy15742 191 DVVIDGFCGCGGNTIQFAAV---------CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFI 243 (342)
Q Consensus 191 ~~vLDlgcGtG~~~~~~a~~---------~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~ 243 (342)
-.|+|+|.|+|.++.-+.+. ..+++.||+|+...+.=++++... +++.+.
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~---~~v~W~ 140 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI---RNIHWH 140 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC---SSEEEE
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC---CCeEEe
Confidence 46999999999998776542 248999999998777555554332 245554
No 464
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=68.60 E-value=21 Score=30.92 Aligned_cols=75 Identities=15% Similarity=0.006 Sum_probs=51.0
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCC-CCcEEEEEccccccC------C-----C
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGV-SHKIQFIQGDFFALA------P-----S 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl-~~~i~~~~~D~~~~~------~-----~ 253 (342)
++++|=.| |+|+++..+++ .|.+|+.++.+++.++.+...+...+. ..++.++.+|+.+.. . .
T Consensus 6 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (280)
T 1xkq_A 6 NKTVIITG-SSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 84 (280)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 55666555 45566555544 589999999999888777666654432 126889999987642 0 1
Q ss_pred CCccEEEEcCCC
Q psy15742 254 LQGDVVFLSPPW 265 (342)
Q Consensus 254 ~~~D~Ii~nPP~ 265 (342)
+..|++|.|.-.
T Consensus 85 g~iD~lv~nAg~ 96 (280)
T 1xkq_A 85 GKIDVLVNNAGA 96 (280)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368999988643
No 465
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=68.31 E-value=14 Score=31.81 Aligned_cols=64 Identities=6% Similarity=-0.072 Sum_probs=47.2
Q ss_pred CeEEeccCCCcHHHHHHHHh----CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCCCCCccEEEEcCCC
Q psy15742 191 DVVIDGFCGCGGNTIQFAAV----CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPW 265 (342)
Q Consensus 191 ~~vLDlgcGtG~~~~~~a~~----~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~~~~~D~Ii~nPP~ 265 (342)
.+||=.|| |.++..+++. |.+|++++.++........ .+++++.+|+.++. -..+|+||..-..
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~-~~~~d~vi~~a~~ 73 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEPS-LDGVTHLLISTAP 73 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--------TTEEEEESSSSCCC-CTTCCEEEECCCC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--------CCCeEEEecccccc-cCCCCEEEECCCc
Confidence 57888884 8888877653 8999999998865443321 26889999998865 4578999876543
No 466
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=68.08 E-value=18 Score=31.31 Aligned_cols=67 Identities=13% Similarity=0.072 Sum_probs=47.1
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC----------CCCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA----------PSLQ 255 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~----------~~~~ 255 (342)
++++|=.|+ +|+++..++ +.|.+|+.+|.+++.++.+...+ + .++.++.+|+.+.. ..+.
T Consensus 30 ~k~vlVTGa-s~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 103 (281)
T 3ppi_A 30 GASAIVSGG-AGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---G--NRAEFVSTNVTSEDSVLAAIEAANQLGR 103 (281)
T ss_dssp TEEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C--TTEEEEECCTTCHHHHHHHHHHHTTSSE
T ss_pred CCEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---C--CceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 556665554 555555554 45899999999998877666554 3 37899999987642 1246
Q ss_pred ccEEEEc
Q psy15742 256 GDVVFLS 262 (342)
Q Consensus 256 ~D~Ii~n 262 (342)
.|+++.|
T Consensus 104 id~lv~~ 110 (281)
T 3ppi_A 104 LRYAVVA 110 (281)
T ss_dssp EEEEEEC
T ss_pred CCeEEEc
Confidence 8999987
No 467
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=68.01 E-value=22 Score=30.20 Aligned_cols=72 Identities=18% Similarity=0.099 Sum_probs=51.2
Q ss_pred CCeEEeccCCCcHHHHHHH----H-hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----------C
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----A-VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----------S 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~-~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----------~ 253 (342)
++++|=. .|+|+++..++ + .|.+|+.++.++...+.+.+.+...+. ++.++.+|+.+... .
T Consensus 4 ~k~vlIT-GasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 4 IHVALVT-GGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL--SPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCEEEES-SCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC--CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEe-CCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCC--eeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 5566644 46677666654 4 588999999999888777777765553 68899999876420 1
Q ss_pred CCccEEEEcCC
Q psy15742 254 LQGDVVFLSPP 264 (342)
Q Consensus 254 ~~~D~Ii~nPP 264 (342)
+..|+||.+.-
T Consensus 81 g~id~li~~Ag 91 (276)
T 1wma_A 81 GGLDVLVNNAG 91 (276)
T ss_dssp SSEEEEEECCC
T ss_pred CCCCEEEECCc
Confidence 36899998754
No 468
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=67.98 E-value=6.3 Score=35.41 Aligned_cols=43 Identities=23% Similarity=0.230 Sum_probs=34.2
Q ss_pred cCCCCeEEeccC--CCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHH
Q psy15742 187 CKASDVVIDGFC--GCGGNTIQFAAV-CQKVISIDIDPAKLRLAQH 229 (342)
Q Consensus 187 ~~~~~~vLDlgc--GtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~ 229 (342)
+++|++||-.|+ |.|..++.+++. |.+|++++.+++.++.+++
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 191 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE 191 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 467899999884 456677777775 8899999999998887754
No 469
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=67.79 E-value=22 Score=30.48 Aligned_cols=73 Identities=11% Similarity=-0.037 Sum_probs=50.9
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEE-eCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISI-DIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PS 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gv-D~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~ 253 (342)
++++|=.| |+|+++..+++ .|.+|+.+ +.++..++.....+...+. ++.++.+|+.+.. ..
T Consensus 4 ~k~vlVTG-as~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 4 NKCALVTG-SSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGV--KVLVVKANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp CCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEec-CCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 55666555 45666655544 58898886 8898888777777765553 7899999987642 11
Q ss_pred CCccEEEEcCCC
Q psy15742 254 LQGDVVFLSPPW 265 (342)
Q Consensus 254 ~~~D~Ii~nPP~ 265 (342)
++.|++|.|.-.
T Consensus 81 g~id~lv~nAg~ 92 (258)
T 3oid_A 81 GRLDVFVNNAAS 92 (258)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368999998643
No 470
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=67.48 E-value=19 Score=31.18 Aligned_cols=71 Identities=10% Similarity=-0.059 Sum_probs=47.4
Q ss_pred CeEEeccCCCcHHHHH----HHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCCC
Q psy15742 191 DVVIDGFCGCGGNTIQ----FAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSLQ 255 (342)
Q Consensus 191 ~~vLDlgcGtG~~~~~----~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~~ 255 (342)
+++|=.|++ |+++.. +++.|.+|+.++.+++.++.....+... .++.++.+|+.+.. ..+.
T Consensus 22 k~vlVTGas-~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 97 (272)
T 2nwq_A 22 STLFITGAT-SGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAMSAAVDNLPEEFAT 97 (272)
T ss_dssp CEEEESSTT-TSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHTCCGGGSS
T ss_pred cEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 456655554 444444 4455899999999998877666555322 36889999987642 1136
Q ss_pred ccEEEEcCCC
Q psy15742 256 GDVVFLSPPW 265 (342)
Q Consensus 256 ~D~Ii~nPP~ 265 (342)
.|++|.|.-.
T Consensus 98 iD~lvnnAG~ 107 (272)
T 2nwq_A 98 LRGLINNAGL 107 (272)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 7999998643
No 471
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=67.23 E-value=24 Score=30.36 Aligned_cols=73 Identities=10% Similarity=-0.072 Sum_probs=50.4
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeC-CHHHHHHHHHHHHHc-CCCCcEEEEEcccccc----CC-------
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDI-DPAKLRLAQHNASVY-GVSHKIQFIQGDFFAL----AP------- 252 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~-s~~~l~~a~~n~~~~-gl~~~i~~~~~D~~~~----~~------- 252 (342)
++++|=.| |+|+++..+++ .|.+|+.++. ++..++.+...+... + .++.++.+|+.+. ..
T Consensus 11 ~k~~lVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 87 (276)
T 1mxh_A 11 CPAAVITG-GARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA--GSAVLCKGDLSLSSSLLDCCEDIIDC 87 (276)
T ss_dssp CCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcC--CceEEEeccCCCccccHHHHHHHHHH
Confidence 55666544 55666666654 4899999999 888777666665543 4 3688999998875 20
Q ss_pred ----CCCccEEEEcCCC
Q psy15742 253 ----SLQGDVVFLSPPW 265 (342)
Q Consensus 253 ----~~~~D~Ii~nPP~ 265 (342)
.+..|++|.|.-.
T Consensus 88 ~~~~~g~id~lv~nAg~ 104 (276)
T 1mxh_A 88 SFRAFGRCDVLVNNASA 104 (276)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHhcCCCCEEEECCCC
Confidence 1368999988643
No 472
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=67.01 E-value=24 Score=29.61 Aligned_cols=74 Identities=12% Similarity=-0.008 Sum_probs=51.6
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccc--cccC-----------C
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDF--FALA-----------P 252 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~--~~~~-----------~ 252 (342)
++++|=.|+ +|+++..+++ .|.+|+.++.++..++.+.+.+...+. .++.++..|+ .+.. .
T Consensus 14 ~k~vlITGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~d~d~~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 14 GRVILVTGA-ARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQ-PQPLIIALNLENATAQQYRELAARVEHE 91 (247)
T ss_dssp TCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTS-CCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCC-CCceEEEeccccCCHHHHHHHHHHHHHh
Confidence 556665555 5666555544 589999999999999888888776664 3577888777 3221 1
Q ss_pred CCCccEEEEcCCC
Q psy15742 253 SLQGDVVFLSPPW 265 (342)
Q Consensus 253 ~~~~D~Ii~nPP~ 265 (342)
.+..|++|.|.-.
T Consensus 92 ~g~id~lv~nAg~ 104 (247)
T 3i1j_A 92 FGRLDGLLHNASI 104 (247)
T ss_dssp HSCCSEEEECCCC
T ss_pred CCCCCEEEECCcc
Confidence 1368999998764
No 473
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=66.95 E-value=34 Score=30.05 Aligned_cols=73 Identities=14% Similarity=0.011 Sum_probs=47.9
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHH-cCCCCcEEEE-EccccccCC--C--CCccEE
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASV-YGVSHKIQFI-QGDFFALAP--S--LQGDVV 259 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~-~gl~~~i~~~-~~D~~~~~~--~--~~~D~I 259 (342)
+.+||= ..|+|.++.++++ .|.+|++++.++...+.....+.. .+ .+++++ .+|+.+... . ..+|+|
T Consensus 11 ~~~vlV-TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 11 GSLVLV-TGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYP--GRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp TCEEEE-ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHST--TTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCEEEE-ECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCC--CceEEEEecCCcChHHHHHHHcCCCEE
Confidence 566764 4566887777654 389999999998766554443322 12 368888 789876431 1 268999
Q ss_pred EEcCCC
Q psy15742 260 FLSPPW 265 (342)
Q Consensus 260 i~nPP~ 265 (342)
|.+-..
T Consensus 88 ih~A~~ 93 (342)
T 1y1p_A 88 AHIASV 93 (342)
T ss_dssp EECCCC
T ss_pred EEeCCC
Confidence 986543
No 474
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=66.68 E-value=26 Score=29.71 Aligned_cols=74 Identities=15% Similarity=0.014 Sum_probs=50.7
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeC-CHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----------C
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDI-DPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----------S 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~-s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----------~ 253 (342)
++++|=.| |+|+++..+++ .|.+|+.++. ++..++...+.+...+ .++.++.+|+.+... .
T Consensus 7 ~k~vlITG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 7 GKVVVITG-SSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG--GEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 55666555 56676666654 4899999999 8877776666665544 368899999876420 1
Q ss_pred CCccEEEEcCCCC
Q psy15742 254 LQGDVVFLSPPWG 266 (342)
Q Consensus 254 ~~~D~Ii~nPP~~ 266 (342)
+..|++|.+.-..
T Consensus 84 g~id~li~~Ag~~ 96 (261)
T 1gee_A 84 GKLDVMINNAGLE 96 (261)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689999886543
No 475
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=66.51 E-value=4.7 Score=36.51 Aligned_cols=43 Identities=26% Similarity=0.233 Sum_probs=35.2
Q ss_pred cCCCCeEEeccC--CCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHH
Q psy15742 187 CKASDVVIDGFC--GCGGNTIQFAAV-CQKVISIDIDPAKLRLAQH 229 (342)
Q Consensus 187 ~~~~~~vLDlgc--GtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~ 229 (342)
+++|++||-.|+ |.|..++.+|+. |.+|++++.+++.++.+++
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 202 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS 202 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 457899999987 467777777776 8899999999988887775
No 476
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=66.41 E-value=9.1 Score=34.57 Aligned_cols=44 Identities=18% Similarity=0.279 Sum_probs=34.2
Q ss_pred hcCCCCeEEeccCC--CcHHHHHHHH-h-CCEEEEEeCCHHHHHHHHH
Q psy15742 186 RCKASDVVIDGFCG--CGGNTIQFAA-V-CQKVISIDIDPAKLRLAQH 229 (342)
Q Consensus 186 ~~~~~~~vLDlgcG--tG~~~~~~a~-~-~~~v~gvD~s~~~l~~a~~ 229 (342)
.++++++||-.|+| .|..++.+++ . |.+|+++|.+++.++.+++
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR 214 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 45678999999987 4555566655 4 8899999999998887754
No 477
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=66.31 E-value=22 Score=30.39 Aligned_cols=71 Identities=10% Similarity=0.046 Sum_probs=49.6
Q ss_pred CCeEEeccCCCcHHHHHHH----HhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----------CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFA----AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----------SL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a----~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----------~~ 254 (342)
++++|=.|+ +|+++..++ +.|.+|+.+|.+++.++...+.+ + .++.++.+|+.+... .+
T Consensus 8 gk~~lVTGa-s~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 8 GKKAIVIGG-THGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---G--PRVHALRSDIADLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp TCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G--GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C--CcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence 566776665 455555554 45899999999998877666554 2 378899999876521 13
Q ss_pred CccEEEEcCCCC
Q psy15742 255 QGDVVFLSPPWG 266 (342)
Q Consensus 255 ~~D~Ii~nPP~~ 266 (342)
..|+++.|.-..
T Consensus 82 ~id~lv~nAg~~ 93 (255)
T 4eso_A 82 AIDLLHINAGVS 93 (255)
T ss_dssp SEEEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 789999886543
No 478
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=66.26 E-value=7.2 Score=35.46 Aligned_cols=42 Identities=19% Similarity=0.159 Sum_probs=33.0
Q ss_pred cCCCCeEEeccC--CCcHHHHHHHHh-CCEEEEEeCCHHHHHHHH
Q psy15742 187 CKASDVVIDGFC--GCGGNTIQFAAV-CQKVISIDIDPAKLRLAQ 228 (342)
Q Consensus 187 ~~~~~~vLDlgc--GtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~ 228 (342)
++++++||-.|+ |.|..++.+++. |.+|++++.+++.++.++
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 212 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL 212 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH
Confidence 467889999986 456666666665 889999999998887664
No 479
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=65.96 E-value=24 Score=30.68 Aligned_cols=72 Identities=18% Similarity=0.019 Sum_probs=49.0
Q ss_pred CCeEEeccCCCcH---HHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCCC
Q psy15742 190 SDVVIDGFCGCGG---NTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSLQ 255 (342)
Q Consensus 190 ~~~vLDlgcGtG~---~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~~ 255 (342)
++++|=.|++.|. ++..+++.|.+|+.+|.+++.++.+...+ + .++.++.+|+.+.. ..+.
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 103 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---G--CGAAACRVDVSDEQQIIAMVDACVAAFGG 103 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---C--SSCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C--CcceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5677766655442 33344555999999999998877665544 3 36889999987652 1137
Q ss_pred ccEEEEcCCCC
Q psy15742 256 GDVVFLSPPWG 266 (342)
Q Consensus 256 ~D~Ii~nPP~~ 266 (342)
.|++|.|.-..
T Consensus 104 iD~lvnnAg~~ 114 (277)
T 3gvc_A 104 VDKLVANAGVV 114 (277)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999886543
No 480
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=65.90 E-value=13 Score=32.76 Aligned_cols=74 Identities=9% Similarity=-0.126 Sum_probs=49.5
Q ss_pred CCeEEeccCCC-cHH----HHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CC
Q psy15742 190 SDVVIDGFCGC-GGN----TIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PS 253 (342)
Q Consensus 190 ~~~vLDlgcGt-G~~----~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~ 253 (342)
++++|=.|++. +++ +..+++.|.+|+.++.++...+.+.......+ .+.++.+|+.+.. ..
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSDAESVDNMFKVLAEEW 106 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 66788777653 234 44455569999999999766555555544444 4678899987642 11
Q ss_pred CCccEEEEcCCCC
Q psy15742 254 LQGDVVFLSPPWG 266 (342)
Q Consensus 254 ~~~D~Ii~nPP~~ 266 (342)
+..|++|.|.-..
T Consensus 107 g~iD~lVnnAG~~ 119 (296)
T 3k31_A 107 GSLDFVVHAVAFS 119 (296)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 4789999986544
No 481
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=65.75 E-value=8 Score=34.89 Aligned_cols=43 Identities=23% Similarity=0.176 Sum_probs=34.3
Q ss_pred hcCCCCeEEeccCCC-cHHHHHHHH-h--CCEEEEEeCCHHHHHHHHH
Q psy15742 186 RCKASDVVIDGFCGC-GGNTIQFAA-V--CQKVISIDIDPAKLRLAQH 229 (342)
Q Consensus 186 ~~~~~~~vLDlgcGt-G~~~~~~a~-~--~~~v~gvD~s~~~l~~a~~ 229 (342)
.+ +|++||-.|+|. |..++.+|+ . |.+|+++|.+++.++.+++
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE 214 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH
Confidence 45 789999999863 666677776 4 7899999999998888764
No 482
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=65.55 E-value=11 Score=32.55 Aligned_cols=68 Identities=22% Similarity=0.125 Sum_probs=45.5
Q ss_pred CeEEeccCCCcH---HHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCCCc
Q psy15742 191 DVVIDGFCGCGG---NTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSLQG 256 (342)
Q Consensus 191 ~~vLDlgcGtG~---~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~~~ 256 (342)
++||=-|++.|. .+..+++.|.+|+.+|.+++.++...+ .+ .++.++.+|+.+.. .-++.
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~----~~--~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~i 76 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK----ER--PNLFYFHGDVADPLTLKKFVEYAMEKLQRI 76 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT----TC--TTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hc--CCEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 456655655553 344455569999999999877654332 22 36888999987642 12478
Q ss_pred cEEEEcCC
Q psy15742 257 DVVFLSPP 264 (342)
Q Consensus 257 D~Ii~nPP 264 (342)
|++|.|--
T Consensus 77 DiLVNNAG 84 (247)
T 3ged_A 77 DVLVNNAC 84 (247)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99998864
No 483
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=65.39 E-value=24 Score=29.53 Aligned_cols=72 Identities=19% Similarity=0.057 Sum_probs=49.1
Q ss_pred eEEeccCCCcHHHHHHHH----hCCEEEE-EeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCCC
Q psy15742 192 VVIDGFCGCGGNTIQFAA----VCQKVIS-IDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSLQ 255 (342)
Q Consensus 192 ~vLDlgcGtG~~~~~~a~----~~~~v~g-vD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~~ 255 (342)
++| +..|+|+++..+++ .|.+|+. .+.++...+...+.++..+- ++.++.+|+.+.. ..+.
T Consensus 3 ~vl-VTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (244)
T 1edo_A 3 VVV-VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG--QAITFGGDVSKEADVEAMMKTAIDAWGT 79 (244)
T ss_dssp EEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTC--EEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred EEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC--cEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 455 44566777777665 4889998 47888877766666655443 6888999987642 1136
Q ss_pred ccEEEEcCCCC
Q psy15742 256 GDVVFLSPPWG 266 (342)
Q Consensus 256 ~D~Ii~nPP~~ 266 (342)
.|++|.+.-..
T Consensus 80 id~li~~Ag~~ 90 (244)
T 1edo_A 80 IDVVVNNAGIT 90 (244)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999886543
No 484
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=65.36 E-value=29 Score=29.04 Aligned_cols=74 Identities=14% Similarity=0.074 Sum_probs=50.7
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHH-cCCCCcEEEEEccccccC-----------CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASV-YGVSHKIQFIQGDFFALA-----------PS 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~-~gl~~~i~~~~~D~~~~~-----------~~ 253 (342)
++++|=.| |+|+++..+++ .|.+|+.++.++..++.....+.. .+. ++.++.+|+.+.. ..
T Consensus 7 ~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (248)
T 2pnf_A 7 GKVSLVTG-STRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGV--KAHGVEMNLLSEESINKAFEEIYNLV 83 (248)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCC--CEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCC--ceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 55666544 56777666654 489999999999877766655543 343 6889999987642 01
Q ss_pred CCccEEEEcCCCC
Q psy15742 254 LQGDVVFLSPPWG 266 (342)
Q Consensus 254 ~~~D~Ii~nPP~~ 266 (342)
+..|+||.+.-..
T Consensus 84 ~~~d~vi~~Ag~~ 96 (248)
T 2pnf_A 84 DGIDILVNNAGIT 96 (248)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689999886543
No 485
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=65.35 E-value=29 Score=30.21 Aligned_cols=74 Identities=12% Similarity=-0.001 Sum_probs=51.1
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcC---CCCcEEEEEccccccC------C----
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYG---VSHKIQFIQGDFFALA------P---- 252 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~g---l~~~i~~~~~D~~~~~------~---- 252 (342)
++++|=.| |+|+++..+++ .|.+|+.++.++..++.+...+.... ...++.++.+|+.+.. .
T Consensus 18 ~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 96 (303)
T 1yxm_A 18 GQVAIVTG-GATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD 96 (303)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence 55677555 56777666654 48999999999988877766665410 1137899999987642 0
Q ss_pred -CCCccEEEEcCC
Q psy15742 253 -SLQGDVVFLSPP 264 (342)
Q Consensus 253 -~~~~D~Ii~nPP 264 (342)
.+..|+||.+.-
T Consensus 97 ~~g~id~li~~Ag 109 (303)
T 1yxm_A 97 TFGKINFLVNNGG 109 (303)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 136899998865
No 486
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=65.33 E-value=6.5 Score=35.61 Aligned_cols=41 Identities=22% Similarity=0.129 Sum_probs=32.7
Q ss_pred CCCeEEeccCC-CcHHHHHHHHh-CC-EEEEEeCCHHHHHHHHH
Q psy15742 189 ASDVVIDGFCG-CGGNTIQFAAV-CQ-KVISIDIDPAKLRLAQH 229 (342)
Q Consensus 189 ~~~~vLDlgcG-tG~~~~~~a~~-~~-~v~gvD~s~~~l~~a~~ 229 (342)
+|++||-.|+| .|..++.+|+. |. +|+++|.+++.++.+++
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~ 210 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK 210 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 68899999985 36666777765 77 89999999998888763
No 487
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=65.13 E-value=12 Score=33.41 Aligned_cols=43 Identities=23% Similarity=0.203 Sum_probs=35.0
Q ss_pred cCCCCeEEeccC--CCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHH
Q psy15742 187 CKASDVVIDGFC--GCGGNTIQFAAV-CQKVISIDIDPAKLRLAQH 229 (342)
Q Consensus 187 ~~~~~~vLDlgc--GtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~ 229 (342)
++++++||-.|+ |.|..++.+++. |.+|+++|.+++.++.+++
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~ 188 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK 188 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 457889999985 677777777775 8899999999988887764
No 488
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=65.12 E-value=10 Score=32.99 Aligned_cols=73 Identities=10% Similarity=-0.048 Sum_probs=47.5
Q ss_pred CCeEEeccCCCcHHHHHH----HHhCCEEEEEeCCHHH-------HHHHHHHHHHcCCCCcEEEEEccccccC-------
Q psy15742 190 SDVVIDGFCGCGGNTIQF----AAVCQKVISIDIDPAK-------LRLAQHNASVYGVSHKIQFIQGDFFALA------- 251 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~----a~~~~~v~gvD~s~~~-------l~~a~~n~~~~gl~~~i~~~~~D~~~~~------- 251 (342)
++++|=.|++ |+++..+ ++.|.+|+.++.+... ++.....+...+ .++.++.+|+.+..
T Consensus 6 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~ 82 (274)
T 3e03_A 6 GKTLFITGAS-RGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAG--GQGLALKCDIREEDQVRAAVA 82 (274)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHT--SEEEEEECCTTCHHHHHHHHH
T ss_pred CcEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcC--CeEEEEeCCCCCHHHHHHHHH
Confidence 5667766665 4554444 4458999999988642 444444444444 37899999987642
Q ss_pred ----CCCCccEEEEcCCC
Q psy15742 252 ----PSLQGDVVFLSPPW 265 (342)
Q Consensus 252 ----~~~~~D~Ii~nPP~ 265 (342)
..+..|++|.|.-.
T Consensus 83 ~~~~~~g~iD~lvnnAG~ 100 (274)
T 3e03_A 83 ATVDTFGGIDILVNNASA 100 (274)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCc
Confidence 11478999998654
No 489
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=65.09 E-value=7.9 Score=35.88 Aligned_cols=59 Identities=14% Similarity=-0.108 Sum_probs=39.4
Q ss_pred CCeEEeccCCCcHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----CCCccEEEEcCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----SLQGDVVFLSPP 264 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----~~~~D~Ii~nPP 264 (342)
..+++|++||.|+ .+.+.|..+ + .+.+ ...++.+|+.++.. ...+|+|+.-||
T Consensus 189 ~ikvidLFaGiGg---Gl~~aGf~v-----------------~-~N~~-~~~~~~~DI~~i~~~~i~~~~~~DlliGG~P 246 (386)
T 2pv0_B 189 PVRVLSLFEDIKK---ELTSLGFLE-----------------S-GSDP-GQLKHVVDVTDTVRKDVEEWGPFDLVYGATP 246 (386)
T ss_dssp CCCEEEESSCCHH---HHHHTTSSC-----------------S-SCCS-CSEEEESCCTTCCHHHHHHSCCCSEEEEECC
T ss_pred CceeeEEeccCCh---hHhhcCccH-----------------H-HcCC-CCcEEeCChhhCCHhHhcccCCCCEEEECCC
Confidence 3579999999995 334446554 1 1221 23467899987642 236899999999
Q ss_pred CCCCcc
Q psy15742 265 WGGPEY 270 (342)
Q Consensus 265 ~~~~~~ 270 (342)
..+.+.
T Consensus 247 CQ~FS~ 252 (386)
T 2pv0_B 247 PLGHTC 252 (386)
T ss_dssp CTTTCS
T ss_pred CCcccc
Confidence 987653
No 490
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=65.08 E-value=7.8 Score=34.62 Aligned_cols=43 Identities=21% Similarity=0.121 Sum_probs=33.3
Q ss_pred cCCCCeEEeccC--CCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHH
Q psy15742 187 CKASDVVIDGFC--GCGGNTIQFAAV-CQKVISIDIDPAKLRLAQH 229 (342)
Q Consensus 187 ~~~~~~vLDlgc--GtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~ 229 (342)
++++++||-.|+ |.|..++.+++. |.+|+++|.+++.++.+++
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~ 183 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK 183 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 457889999883 456666666664 8899999999988887765
No 491
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=65.02 E-value=23 Score=30.34 Aligned_cols=75 Identities=17% Similarity=0.010 Sum_probs=48.9
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccCC-----------CC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----------SL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~~-----------~~ 254 (342)
++++|=.| |+|+++..+++ .|.+|+.++.++...+.+...+....-..++.++.+|+.+... .+
T Consensus 7 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (267)
T 2gdz_A 7 GKVALVTG-AAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 85 (267)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEEC-CCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 55666555 45666655544 4899999999988776655555332111368899999876420 13
Q ss_pred CccEEEEcCCC
Q psy15742 255 QGDVVFLSPPW 265 (342)
Q Consensus 255 ~~D~Ii~nPP~ 265 (342)
..|++|.|.-.
T Consensus 86 ~id~lv~~Ag~ 96 (267)
T 2gdz_A 86 RLDILVNNAGV 96 (267)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 57999988653
No 492
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=64.77 E-value=8.1 Score=35.06 Aligned_cols=43 Identities=19% Similarity=0.169 Sum_probs=33.9
Q ss_pred cCCCCeEEecc--CCCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHH
Q psy15742 187 CKASDVVIDGF--CGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQH 229 (342)
Q Consensus 187 ~~~~~~vLDlg--cGtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~ 229 (342)
+++|++||-.| .|.|..++.+++. |.+|+++|.+++.++.+++
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 210 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER 210 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 45788999884 3356677777775 8899999999999888765
No 493
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=64.76 E-value=27 Score=29.22 Aligned_cols=70 Identities=11% Similarity=-0.015 Sum_probs=45.3
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-------CCCCccE
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-------PSLQGDV 258 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-------~~~~~D~ 258 (342)
++++|=.| |+|+++..+++ .|.+|+.++.++..++...... ..++++.+|+.+.. ..+..|+
T Consensus 7 ~k~vlITG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~id~ 79 (244)
T 3d3w_A 7 GRRVLVTG-AGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDLGDWEATERALGSVGPVDL 79 (244)
T ss_dssp TCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHTTCCCCCE
T ss_pred CcEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------CCCCEEEEeCCCHHHHHHHHHHcCCCCE
Confidence 55666544 55666666654 4899999999987765443332 13567788887642 1236899
Q ss_pred EEEcCCCC
Q psy15742 259 VFLSPPWG 266 (342)
Q Consensus 259 Ii~nPP~~ 266 (342)
+|.+.-..
T Consensus 80 vi~~Ag~~ 87 (244)
T 3d3w_A 80 LVNNAAVA 87 (244)
T ss_dssp EEECCCCC
T ss_pred EEECCccC
Confidence 99886543
No 494
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=64.72 E-value=14 Score=30.89 Aligned_cols=68 Identities=7% Similarity=-0.046 Sum_probs=45.8
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcE-EEEEccccccCC--CCCccEEEEc
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKI-QFIQGDFFALAP--SLQGDVVFLS 262 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i-~~~~~D~~~~~~--~~~~D~Ii~n 262 (342)
+++||=. .|+|.++..+++ .|.+|++++.++..++.... .++ +++.+|+.+... -...|+||.+
T Consensus 21 ~~~ilVt-GatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ 91 (236)
T 3e8x_A 21 GMRVLVV-GANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLEEDFSHAFASIDAVVFA 91 (236)
T ss_dssp CCEEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTTSCCGGGGTTCSEEEEC
T ss_pred CCeEEEE-CCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccHHHHHHHHcCCCEEEEC
Confidence 6677754 466777776665 38999999999876544322 156 889999872221 1368999988
Q ss_pred CCCC
Q psy15742 263 PPWG 266 (342)
Q Consensus 263 PP~~ 266 (342)
-...
T Consensus 92 ag~~ 95 (236)
T 3e8x_A 92 AGSG 95 (236)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6644
No 495
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=64.46 E-value=34 Score=28.98 Aligned_cols=67 Identities=16% Similarity=0.062 Sum_probs=44.0
Q ss_pred EEeccCCCcHHHHHH----HHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCCCcc
Q psy15742 193 VIDGFCGCGGNTIQF----AAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSLQGD 257 (342)
Q Consensus 193 vLDlgcGtG~~~~~~----a~~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~~~D 257 (342)
+|=.|+ +|+++..+ ++.|.+|+.++.+++.++.....+ + .++.++.+|+.+.. ..+..|
T Consensus 3 vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 76 (248)
T 3asu_A 3 VLVTGA-TAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---G--DNLYIAQLDVRNRAAIEEMLASLPAEWCNID 76 (248)
T ss_dssp EEETTT-TSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C--TTEEEEECCTTCHHHHHHHHHTSCTTTCCCC
T ss_pred EEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---c--CceEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 444443 44444444 445899999999988776655443 2 36888999987642 123789
Q ss_pred EEEEcCCC
Q psy15742 258 VVFLSPPW 265 (342)
Q Consensus 258 ~Ii~nPP~ 265 (342)
++|.|.-.
T Consensus 77 ~lvnnAg~ 84 (248)
T 3asu_A 77 ILVNNAGL 84 (248)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99988643
No 496
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=64.29 E-value=30 Score=30.34 Aligned_cols=75 Identities=16% Similarity=0.046 Sum_probs=51.6
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCC-CCcEEEEEccccccCC-----------C
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGV-SHKIQFIQGDFFALAP-----------S 253 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl-~~~i~~~~~D~~~~~~-----------~ 253 (342)
++++|=.| |+|+++..+++ .|.+|+.++.+++.++.....+...+. ..++.++.+|+.+... .
T Consensus 26 ~k~vlVTG-as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 104 (297)
T 1xhl_A 26 GKSVIITG-SSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 104 (297)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 55666555 55666666554 489999999999888777666655442 1168899999876420 1
Q ss_pred CCccEEEEcCCC
Q psy15742 254 LQGDVVFLSPPW 265 (342)
Q Consensus 254 ~~~D~Ii~nPP~ 265 (342)
+..|++|.|.-.
T Consensus 105 g~iD~lvnnAG~ 116 (297)
T 1xhl_A 105 GKIDILVNNAGA 116 (297)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 368999998654
No 497
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=64.11 E-value=4.7 Score=36.05 Aligned_cols=38 Identities=11% Similarity=0.090 Sum_probs=31.4
Q ss_pred eEEeccC--CCcHHHHHHHHh-CCEEEEEeCCHHHHHHHHH
Q psy15742 192 VVIDGFC--GCGGNTIQFAAV-CQKVISIDIDPAKLRLAQH 229 (342)
Q Consensus 192 ~vLDlgc--GtG~~~~~~a~~-~~~v~gvD~s~~~l~~a~~ 229 (342)
+||=.|+ |.|..++.+|+. |.+|++++.+++.++.+++
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~ 189 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS 189 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 4888776 567788888886 8899999999998888865
No 498
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=63.84 E-value=29 Score=28.99 Aligned_cols=70 Identities=10% Similarity=-0.065 Sum_probs=46.0
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC------C-CCCccE
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA------P-SLQGDV 258 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~------~-~~~~D~ 258 (342)
++++|=. .|+|.++..+++ .|.+|++++.++..++...... .+++++.+|+.+.. . .+..|+
T Consensus 7 ~~~vlVT-GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~id~ 79 (244)
T 1cyd_A 7 GLRALVT-GAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLGDWDATEKALGGIGPVDL 79 (244)
T ss_dssp TCEEEEE-STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHTTCCCCSE
T ss_pred CCEEEEe-CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCCCcEEecCCCHHHHHHHHHHcCCCCE
Confidence 5566654 456777666654 4899999999987665443321 24567788887642 1 236899
Q ss_pred EEEcCCCC
Q psy15742 259 VFLSPPWG 266 (342)
Q Consensus 259 Ii~nPP~~ 266 (342)
+|.+.-..
T Consensus 80 vi~~Ag~~ 87 (244)
T 1cyd_A 80 LVNNAALV 87 (244)
T ss_dssp EEECCCCC
T ss_pred EEECCccc
Confidence 99886544
No 499
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=63.66 E-value=32 Score=29.28 Aligned_cols=75 Identities=13% Similarity=0.129 Sum_probs=49.5
Q ss_pred CCeEEeccCCCcHHHHHHHH----hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------CCC
Q psy15742 190 SDVVIDGFCGCGGNTIQFAA----VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-----------PSL 254 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~a~----~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~-----------~~~ 254 (342)
++++|=.| |+|+++..+++ .|.+|+.++.++..++.+.+.+....-..++.++.+|+.+.. ..+
T Consensus 7 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (260)
T 2z1n_A 7 GKLAVVTA-GSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG 85 (260)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 55666555 45666655554 489999999999887766665543200126889999987642 113
Q ss_pred CccEEEEcCCCC
Q psy15742 255 QGDVVFLSPPWG 266 (342)
Q Consensus 255 ~~D~Ii~nPP~~ 266 (342)
.|++|.|.-..
T Consensus 86 -id~lv~~Ag~~ 96 (260)
T 2z1n_A 86 -ADILVYSTGGP 96 (260)
T ss_dssp -CSEEEECCCCC
T ss_pred -CCEEEECCCCC
Confidence 89999986543
No 500
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=63.60 E-value=22 Score=30.25 Aligned_cols=75 Identities=11% Similarity=-0.022 Sum_probs=48.9
Q ss_pred CCeEEeccCCCcHHHHHH----HH---hCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEccccccC-----------
Q psy15742 190 SDVVIDGFCGCGGNTIQF----AA---VCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA----------- 251 (342)
Q Consensus 190 ~~~vLDlgcGtG~~~~~~----a~---~~~~v~gvD~s~~~l~~a~~n~~~~gl~~~i~~~~~D~~~~~----------- 251 (342)
++++|=.|+ +|+++..+ ++ .|.+|+.++.++..++.+...+.......++.++.+|+.+..
T Consensus 6 ~k~~lVTGa-s~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (259)
T 1oaa_A 6 CAVCVLTGA-SRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp SEEEEESSC-SSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CcEEEEeCC-CChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence 445665554 45555544 44 588999999999888777666654321136889999987642
Q ss_pred --CCCCcc--EEEEcCCC
Q psy15742 252 --PSLQGD--VVFLSPPW 265 (342)
Q Consensus 252 --~~~~~D--~Ii~nPP~ 265 (342)
..+.+| ++|.|.-.
T Consensus 85 ~~~~g~~d~~~lvnnAg~ 102 (259)
T 1oaa_A 85 LPRPEGLQRLLLINNAAT 102 (259)
T ss_dssp SCCCTTCCEEEEEECCCC
T ss_pred ccccccCCccEEEECCcc
Confidence 113567 88887643
Done!