RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15742
(342 letters)
>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793
{Pyrococcus horikoshii [TaxId: 53953]}
Length = 260
Score = 61.7 bits (149), Expect = 1e-11
Identities = 23/114 (20%), Positives = 41/114 (35%), Gaps = 2/114 (1%)
Query: 165 DVVIDGWYSVTPEKVAQHIASRCKASDVVIDGFCGCGGNTIQFA-AVCQKVISIDIDPAK 223
DV + + +A K ++V+D F G G ++ A KVI+I+ DP
Sbjct: 84 DVAKIMFSPANVK-ERVRMAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYT 142
Query: 224 LRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARSSFSI 277
+ N + V ++ D D + + E+ + SI
Sbjct: 143 FKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVVRTHEFIPKALSI 196
>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT)
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 186
Score = 56.4 bits (135), Expect = 3e-10
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Query: 175 TPEKVAQHIAS--RCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNAS 232
T +V I +DV +D CG GG T++ A ++V +ID +P + + N
Sbjct: 17 TAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQ 76
Query: 233 VYGVSHKIQFIQGDFFALAPSL-QGDVVFLS 262
+G+ + ++GD + D+ +
Sbjct: 77 RHGLGDNVTLMEGDAPEALCKIPDIDIAVVG 107
>d2oyra1 c.66.1.55 (A:1-250) Hypothetical protein YhiQ {Shigella
flexneri [TaxId: 623]}
Length = 250
Score = 45.8 bits (108), Expect = 3e-06
Identities = 20/115 (17%), Positives = 40/115 (34%), Gaps = 12/115 (10%)
Query: 177 EKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPA--------KLRLAQ 228
E VA+ + + V+D G G + A+V +V ++ +P R
Sbjct: 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYA 135
Query: 229 HNASVYGVSHKIQFIQGDFFALAPSL--QGDVVFLSPPWGGPEYARSSFSIDNIF 281
+ ++Q I + + VV+L P + P +S+ +
Sbjct: 136 DAEIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPMF--PHKQKSALVKKEMR 188
>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 309
Score = 45.9 bits (108), Expect = 3e-06
Identities = 25/179 (13%), Positives = 52/179 (29%), Gaps = 24/179 (13%)
Query: 178 KVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVS 237
+ ++ V++ F G ++ AA +V +D + A+ N + G+
Sbjct: 121 EWLKNAVETADRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLE 180
Query: 238 H-KIQFIQGDFFALAPSLQG-----DVVFLSPPWGGPEYARSSFSIDNIFPEQGGGRRLF 291
I++I D + D++ PP G + + +
Sbjct: 181 QAPIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQL------FDHLPLML 234
Query: 292 QVARGISPNVGYYLPRTSDVF------------EIFHDSGKKGSFISLTGRQMFSPSQD 338
+ R I L T+ E +G + L R+ +
Sbjct: 235 DICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVASGELVIREAGLDGKT 293
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Human (Homo sapiens) [TaxId:
9606]}
Length = 328
Score = 44.1 bits (103), Expect = 1e-05
Identities = 16/110 (14%), Positives = 33/110 (30%), Gaps = 15/110 (13%)
Query: 168 IDGWYSVTPEKVAQHIASRC--KASDVVIDGFCGCGGNTIQFAA--VCQKVISIDIDPAK 223
Y T + + D+ +D G G +Q AA C+ ++
Sbjct: 128 SPEVYGETSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIP 187
Query: 224 LRLAQHNASVYGV--------SHKIQFIQGDFFAL---APSLQGDVVFLS 262
+ A+ + + +GDF + V+F++
Sbjct: 188 AKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIANTSVIFVN 237
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 324
Score = 42.5 bits (99), Expect = 4e-05
Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 5/74 (6%)
Query: 178 KVAQHIASRC--KASDVVIDGFCGCGGNTIQFAAVCQ---KVISIDIDPAKLRLAQHNAS 232
K I S D V++ G GG ++ + +VIS ++ LA+ N
Sbjct: 85 KDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYK 144
Query: 233 VYGVSHKIQFIQGD 246
+ S K+ ++
Sbjct: 145 HWRDSWKLSHVEEW 158
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase
{Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}
Length = 252
Score = 41.9 bits (97), Expect = 4e-05
Identities = 23/134 (17%), Positives = 38/134 (28%), Gaps = 11/134 (8%)
Query: 183 IASRCKASDVVIDGFCGCGGNTIQFAAV-CQKVISIDIDPAKLRLAQHNASVYGVSHKIQ 241
I K D V+D CG GG+ +++ + +DI + A+ A K+
Sbjct: 18 IRLYTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVF 77
Query: 242 FIQGDFFALAPSLQGDVVFLSPPWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNV 301
F D + + S FS F +
Sbjct: 78 FRAQDSYGRHM----------DLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPG 127
Query: 302 GYYLPRTSDVFEIF 315
GY++ I
Sbjct: 128 GYFIMTVPSRDVIL 141
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852
{Thermoplasma acidophilum [TaxId: 2303]}
Length = 250
Score = 40.0 bits (93), Expect = 2e-04
Identities = 15/93 (16%), Positives = 29/93 (31%), Gaps = 5/93 (5%)
Query: 178 KVAQHIASRC--KASDVVIDGFCGCGGNTIQFAAVCQ---KVISIDIDPAKLRLAQHNAS 232
A +I RC + +++ G G + + ++ D L+ A N S
Sbjct: 72 IDASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLS 131
Query: 233 VYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPW 265
+ ++ + D D V P
Sbjct: 132 EFYDIGNVRTSRSDIADFISDQMYDAVIADIPD 164
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 406
Score = 40.4 bits (94), Expect = 2e-04
Identities = 13/84 (15%), Positives = 23/84 (27%), Gaps = 4/84 (4%)
Query: 172 YSVTPEKVAQHIASRC--KASDVVIDGFCGCGGNTIQFAAV--CQKVISIDIDPAKLRLA 227
Y + +C K D +D G G +Q A C +I L
Sbjct: 197 YGELLPNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLT 256
Query: 228 QHNASVYGVSHKIQFIQGDFFALA 251
K+ ++ + +
Sbjct: 257 ILQYEELKKRCKLYGMRLNNVEFS 280
>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA
methyltransferase Trm1 {Pyrococcus horikoshii [TaxId:
53953]}
Length = 375
Score = 39.6 bits (92), Expect = 3e-04
Identities = 16/100 (16%), Positives = 25/100 (25%), Gaps = 18/100 (18%)
Query: 183 IASRCKASDVVIDGFCGCGGNTIQFA--AVCQKVISIDIDPAKLRLAQHNASVYGVSH-- 238
+ +V+D G I+FA ++V DI L + N +
Sbjct: 39 VLLNILNPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELR 98
Query: 239 ------------KIQFIQGDFFALAPSLQG--DVVFLSPP 264
I D L + L P
Sbjct: 99 ESKGRAILKGEKTIVINHDDANRLMAERHRYFHFIDLDPF 138
>d1o9ga_ c.66.1.29 (A:) rRNA methyltransferase AviRa {Streptomyces
viridochromogenes [TaxId: 1938]}
Length = 249
Score = 38.9 bits (90), Expect = 4e-04
Identities = 9/63 (14%), Positives = 15/63 (23%), Gaps = 9/63 (14%)
Query: 213 KVISIDIDPAKLRLA---QHNASVYGVSHKIQFIQGDFFAL------APSLQGDVVFLSP 263
+ + A + + G + D F DVV
Sbjct: 116 ERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDL 175
Query: 264 PWG 266
P+G
Sbjct: 176 PYG 178
>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus
fulgidus [TaxId: 2234]}
Length = 209
Score = 37.8 bits (87), Expect = 9e-04
Identities = 19/149 (12%), Positives = 40/149 (26%), Gaps = 21/149 (14%)
Query: 167 VIDGWYSVTP--EKVAQHIAS----RCKASDVVIDGFCGCGGNTIQFAAVC--QKVISID 218
V DG+ P K+A I + + + V+ G A + + +++
Sbjct: 28 VFDGYREWVPWRSKLAAMILKGHRLKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVE 87
Query: 219 IDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA-PSLQGDVVF-----LSPPWGGPEYAR 272
+ I + D S + V ++
Sbjct: 88 YSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSGIVEKVDLIYQDIAQKNQIEILKA 144
Query: 273 SSFSIDNIFPEQGGGRRLFQVARGISPNV 301
++ F ++ G + AR I
Sbjct: 145 NAEF----FLKEKGEVVIMVKARSIDSTA 169
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis
[TaxId: 1423]}
Length = 234
Score = 35.7 bits (81), Expect = 0.005
Identities = 16/77 (20%), Positives = 28/77 (36%)
Query: 184 ASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFI 243
+ C+A V+D G G + F+ Q+ I +D + +A A GV +
Sbjct: 11 TAECRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQ 70
Query: 244 QGDFFALAPSLQGDVVF 260
P D++
Sbjct: 71 GTAESLPFPDDSFDIIT 87
>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus
jannaschii [TaxId: 2190]}
Length = 230
Score = 35.5 bits (81), Expect = 0.005
Identities = 21/134 (15%), Positives = 34/134 (25%), Gaps = 4/134 (2%)
Query: 188 KASDVVIDGFCGCGGNTIQFAAVC--QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQG 245
K ++ G A + V +I+ P +R + I
Sbjct: 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDAN 132
Query: 246 DFFALAPSLQGDVVFLSPPWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYL 305
A + V + P A F ++GG + AR I
Sbjct: 133 KPQEYAN-IVEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPK- 190
Query: 306 PRTSDVFEIFHDSG 319
+ EI G
Sbjct: 191 EIFKEQKEILEAGG 204
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase
3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 311
Score = 34.9 bits (79), Expect = 0.010
Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 191 DVVIDGFCGCGGNTIQFA-AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFA 249
VV+D CG G ++ A A +KV+ +D L A + + I I+G
Sbjct: 37 KVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEI-LYQAMDIIRLNKLEDTITLIKGKIEE 95
Query: 250 LAPSLQGDVVFLSPPWG 266
+ ++ V +S G
Sbjct: 96 VHLPVEKVDVIISEWMG 112
>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 197
Score = 34.3 bits (78), Expect = 0.012
Identities = 19/98 (19%), Positives = 31/98 (31%), Gaps = 14/98 (14%)
Query: 175 TPEKVAQHIASRCKASD-----VVIDGFCGCGGNTIQFA-AVCQKVISIDIDPAKLRLAQ 228
T A + VID G G + V + DIDP + A+
Sbjct: 29 TDASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAK 88
Query: 229 HNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWG 266
N + F+ D ++ ++PP+G
Sbjct: 89 RNCG------GVNFMVADVSEISGKYD--TWIMNPPFG 118
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus
halodurans [TaxId: 86665]}
Length = 231
Score = 34.2 bits (77), Expect = 0.013
Identities = 23/146 (15%), Positives = 43/146 (29%), Gaps = 14/146 (9%)
Query: 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDF 247
K ++ V+D G G FA +KV++ D+ L++A+ G
Sbjct: 14 KGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE 73
Query: 248 FALAPSLQGDVVFLSPPWGGPEYARSSFS--------------IDNIFPEQGGGRRLFQV 293
+ +V S S +DN PE +
Sbjct: 74 QMPFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNY 133
Query: 294 ARGISPNVGYYLPRTSDVFEIFHDSG 319
+ + SD ++ ++G
Sbjct: 134 VEKERDYSHHRAWKKSDWLKMLEEAG 159
>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing
protein METT10D {Human (Homo sapiens) [TaxId: 9606]}
Length = 250
Score = 34.4 bits (78), Expect = 0.015
Identities = 13/82 (15%), Positives = 25/82 (30%), Gaps = 9/82 (10%)
Query: 193 VIDGFCGCGGNTIQFAAVC--QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL 250
ID G A ++ ++D A+ N +S I+ ++ L
Sbjct: 65 GIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTL 124
Query: 251 -------APSLQGDVVFLSPPW 265
+ D +PP+
Sbjct: 125 LMDALKEESEIIYDFCMCNPPF 146
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas
syringae [TaxId: 317]}
Length = 201
Score = 33.1 bits (74), Expect = 0.028
Identities = 17/153 (11%), Positives = 40/153 (26%), Gaps = 8/153 (5%)
Query: 193 VIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP 252
V+ CG + + V+ ++ A + +
Sbjct: 24 VLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIE 83
Query: 253 SLQGDVVFLSPPWGGPEYARSSFSIDNIFPEQGGGRRLFQVARGISPNVGYYLPRTSDVF 312
GD L+ G A + P R + + + L +
Sbjct: 84 IWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLL-----IT 138
Query: 313 EIFHDSGKKGSFISLT---GRQMFSPSQDMETV 342
+ + +G S+ ++ S + ++ V
Sbjct: 139 LEYDQALLEGPPFSVPQTWLHRVMSGNWEVTKV 171
>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle
and C-terminal domains {Thermus thermophilus [TaxId:
274]}
Length = 318
Score = 33.3 bits (75), Expect = 0.036
Identities = 21/107 (19%), Positives = 42/107 (39%), Gaps = 6/107 (5%)
Query: 171 WYSVTPEKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHN 230
++ + + +D F GG + A ++V+++D LR A+ N
Sbjct: 127 KTGAYLDQRENRLYMERFRGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEEN 186
Query: 231 ASVYGVSHKIQFIQGDFFALAPSLQG-----DVVFLSPPWGGPEYAR 272
A + G+ ++ ++ + F L L+ D+V L PP
Sbjct: 187 ARLNGL-GNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKGKKD 232
>d1dcta_ c.66.1.26 (A:) DNA methylase HaeIII {Haemophilus aegyptius
[TaxId: 197575]}
Length = 324
Score = 33.1 bits (74), Expect = 0.038
Identities = 13/74 (17%), Positives = 27/74 (36%), Gaps = 8/74 (10%)
Query: 193 VIDGFCGCGGNTIQF-AAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALA 251
+I F G GG + F A + + + + D + + + N H + I+GD ++
Sbjct: 3 LISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESN-------HSAKLIKGDISKIS 55
Query: 252 PSLQGDVVFLSPPW 265
+
Sbjct: 56 SDEFPKCDGIIGGP 69
>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 316
Score = 32.5 bits (73), Expect = 0.056
Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Query: 191 DVVIDGFCGCGGNTIQFA-AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFA 249
VV+D G G + A A +KVI I+ + + + H + I+G
Sbjct: 35 KVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKA-NKLDHVVTIIKGKVEE 93
Query: 250 L 250
+
Sbjct: 94 V 94
>d2c7pa1 c.66.1.26 (A:1-327) DNA methylase HhaI {Haemophilus
haemolyticus [TaxId: 726]}
Length = 327
Score = 32.3 bits (72), Expect = 0.082
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 193 VIDGFCGCGGNTIQF-AAVCQKVISIDIDPAKLRLAQHN 230
ID F G GG + + + V S + D + + N
Sbjct: 14 FIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMN 52
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 328
Score = 31.8 bits (71), Expect = 0.098
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 191 DVVIDGFCGCGGNTIQFA-AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFF 248
+V+D CG G ++ A + VI +D+ +A+ + G S KI ++G
Sbjct: 40 KIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSII-EMAKELVELNGFSDKITLLRGKLE 97
>d1g55a_ c.66.1.26 (A:) DNMT2 {Human (Homo sapiens) [TaxId: 9606]}
Length = 343
Score = 31.6 bits (70), Expect = 0.11
Identities = 9/41 (21%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 193 VIDGFCGCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHN 230
V++ + G GG Q V +ID++ + ++N
Sbjct: 5 VLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYN 45
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Length = 354
Score = 31.1 bits (69), Expect = 0.20
Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 5/100 (5%)
Query: 17 ITYKLSTLSGCAQKVLFNILEDVAYQDILITYKLS-TLSGCAQKVLF-NI-LEDVAYQET 73
I LS L + V Y+D +T L +L G ++ L N ET
Sbjct: 257 INKSLSALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAET 316
Query: 74 LNTLPSEFGSQRKKKRRRKKRSFELNYQEDLGDLENVPEE 113
L+TL FG + K + + K + EL+ E L +
Sbjct: 317 LSTL--RFGMRAKSIKNKAKVNAELSPAELKQMLAKAKTQ 354
>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase,
INMT {Human (Homo sapiens) [TaxId: 9606]}
Length = 257
Score = 30.8 bits (68), Expect = 0.21
Identities = 7/71 (9%), Positives = 16/71 (22%), Gaps = 1/71 (1%)
Query: 177 EKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQK-VISIDIDPAKLRLAQHNASVYG 235
E + + D +ID G + A + + D +
Sbjct: 39 ECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEP 98
Query: 236 VSHKIQFIQGD 246
++
Sbjct: 99 GAYDWTPAVKF 109
>d1g60a_ c.66.1.11 (A:) Methyltransferase mboII {Moraxella bovis
[TaxId: 476]}
Length = 256
Score = 30.4 bits (67), Expect = 0.28
Identities = 22/145 (15%), Positives = 46/145 (31%), Gaps = 17/145 (11%)
Query: 99 NYQEDLGDLENVPEEIWANPYLNKYYQQRYLYWSRYDEGILMDEESWYSVTPEKVAQHIA 158
QE + + + Y+ ++GIL + + W+ ++ +
Sbjct: 114 TGQETILFFSKSKNHTFNYDEVRVPYESTDRIKHASEKGILKNGKRWFPNPNGRLCGEVW 173
Query: 159 --------SRCKASDVVIDGWYSVTPEKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAV 210
+ V + + + + I + +D+V+D F G G T A
Sbjct: 174 HFSSQRHKEKVNGKTVKLTHITPKPRDLIERIIRASSNPNDLVLDCFMGSG--TTAIVAK 231
Query: 211 C--QKVISIDIDP-----AKLRLAQ 228
+ I D++ A L Q
Sbjct: 232 KLGRNFIGCDMNAEYVNQANFVLNQ 256
>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase
domain {Thermus thermophilus [TaxId: 274]}
Length = 182
Score = 29.7 bits (66), Expect = 0.32
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 188 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHN 230
+ V +D G G+ +VI +D DP + A+
Sbjct: 17 RPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKGL 59
>d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria
monocytogenes [TaxId: 1639]}
Length = 328
Score = 29.5 bits (65), Expect = 0.52
Identities = 42/246 (17%), Positives = 78/246 (31%), Gaps = 57/246 (23%)
Query: 32 LFNILEDVAYQDILITYKLSTLSGCAQKVLFNILEDVAYQETLNTLPSEFGSQRKKKRRR 91
LF +L++ A I++ +L + LE A ET L + Q+++
Sbjct: 8 LFQVLDNTA---IILQNELEI----------SYLE--AVYETGENLFQKEVLQKEELSSE 52
Query: 92 KKRSFELNYQEDLGDLENVPEEIWANPYLNKYYQQRYLYWSRYDEGILMDEESWYSVTPE 151
K+ + +Y+ +LEN E + GI ++ + +TP+
Sbjct: 53 KQLKLQASYESI--ELENFSNEEIRKGL-------QLALLKGMKHGIQVNHQ----MTPD 99
Query: 152 KVAQHIASRCKASDVVIDGWYSVTPEKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVC 211
+ +A + + I K + ++D CG
Sbjct: 100 SIGFIVA------------------YLLEKVIQK--KKNVSILDPACGTANLLTTVINQL 139
Query: 212 QK-------VISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPP 264
+ +D+D + LA A + K+ + D A DVV P
Sbjct: 140 ELKGDVDVHASGVDVDDLLISLALVGADLQ--RQKMTLLHQDGLANLLVDPVDVVISDLP 197
Query: 265 WGGPEY 270
G
Sbjct: 198 VGYYPD 203
>d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal domain
{Thermus aquaticus [TaxId: 271]}
Length = 223
Score = 29.3 bits (64), Expect = 0.63
Identities = 16/94 (17%), Positives = 31/94 (32%), Gaps = 9/94 (9%)
Query: 175 TPEKVAQHIASRC--KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNAS 232
TP +V + S V++ C G F ++ + + +
Sbjct: 3 TPPEVVDFMVSLAEAPRGGRVLEPACAHGP----FLRAFREAH---GTAYRFVGVEIDPK 55
Query: 233 VYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWG 266
+ + I DF P D++ +PP+G
Sbjct: 56 ALDLPPWAEGILADFLLWEPGEAFDLILGNPPYG 89
>d2ia1a1 d.359.1.1 (A:1-166) Uncharacterized protein BH3703
{Bacillus halodurans [TaxId: 86665]}
Length = 166
Score = 27.8 bits (62), Expect = 1.5
Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 4/58 (6%)
Query: 92 KKRSFELNYQEDLGDLENVPEEIWANPYLNKYYQQRYLYWSRYDEGILMDEESWYSVT 149
S E D+ D+ VP++ ++ KY + + + E W S
Sbjct: 47 SASSDEWTKDIDIRDVIKVPQDE----FMEKYNELSFCISDFRKDYAEAFGEPWMSFQ 100
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia
coli [TaxId: 562]}
Length = 268
Score = 28.0 bits (61), Expect = 1.6
Identities = 20/112 (17%), Positives = 41/112 (36%), Gaps = 4/112 (3%)
Query: 139 LMDEESWYSVTPEKVAQHIASRCKASDVVIDGWYSVTPEKVAQHIASR-CKASDVVIDGF 197
L+ + S P A+ + +R + G Y + + + R + V+D
Sbjct: 36 LLPVQHKRSRDPGDSAEMMQAR---RAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIG 92
Query: 198 CGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFA 249
CG G T FA ++ + +D +K+ + V+ + F+
Sbjct: 93 CGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFS 144
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 278
Score = 28.0 bits (61), Expect = 1.6
Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 177 EKVAQHIASRC--KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVY 234
+ I + + +DVV++ G G T++ +KV++ ++DP +
Sbjct: 7 PLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGT 66
Query: 235 GVSHKIQFIQGDFF 248
V+ K+Q + GD
Sbjct: 67 PVASKLQVLVGDVL 80
>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase
domain {Thermotoga maritima [TaxId: 2336]}
Length = 192
Score = 27.1 bits (59), Expect = 2.8
Identities = 13/84 (15%), Positives = 28/84 (33%), Gaps = 2/84 (2%)
Query: 172 YSVTPEKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNA 231
V +V + + + +++D G GG++ C I ID L
Sbjct: 8 IPVMVREVIEFLKP--EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEE 65
Query: 232 SVYGVSHKIQFIQGDFFALAPSLQ 255
+ S ++ + + L+
Sbjct: 66 KLKEFSDRVSLFKVSYREADFLLK 89
>d3bofa2 c.1.26.1 (A:1-300) Cobalamin-dependent methionine synthase
MetH, N-terminal domain {Thermotoga maritima [TaxId:
2336]}
Length = 300
Score = 27.3 bits (59), Expect = 3.0
Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 4/79 (5%)
Query: 111 PEEIWANPYLNKYYQQRYLYWSRYDEGILMDEESWYSVTPEKVAQHIASRCKASDVVIDG 170
E + L++Y + + + I+ + ++ Y + P A HI S + + G
Sbjct: 212 EEILPIFQELSQYTDKFLVVEPNAGKPIVENGKTVYPLKPHDFAVHIDSYYELGVNIFGG 271
Query: 171 WYSVTPEKVAQHIASRCKA 189
TPE H+ K
Sbjct: 272 CCGTTPE----HVKLFRKV 286
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 292
Score = 26.8 bits (58), Expect = 3.8
Identities = 11/56 (19%), Positives = 17/56 (30%)
Query: 193 VIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFF 248
V+D CG G ++I V S+D L+ A +
Sbjct: 60 VLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEA 115
>d1vnda_ a.4.1.1 (A:) VND/NK-2 protein {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 77
Score = 24.6 bits (53), Expect = 6.0
Identities = 10/55 (18%), Positives = 18/55 (32%), Gaps = 8/55 (14%)
Query: 82 GSQRKKKRRRKKRSFELNYQEDLGDLENVPEEIWANPYLNKYYQQRYLYWSRYDE 136
G KK++RR + + +LE YL+ ++ R
Sbjct: 4 GLPNKKRKRRVLFT-----KAQTYELE---RRFRQQRYLSAPEREHLASLIRLTP 50
>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538
{Streptococcus pyogenes [TaxId: 1314]}
Length = 152
Score = 25.6 bits (55), Expect = 6.5
Identities = 7/28 (25%), Positives = 11/28 (39%)
Query: 193 VIDGFCGCGGNTIQFAAVCQKVISIDID 220
V+D F G GG I+ + +
Sbjct: 18 VLDLFAGSGGLAIEAVSRGMSAAVLVEK 45
>d1e5da1 c.23.5.1 (A:251-402) Rubredoxin oxygen:oxidoreductase
(ROO), C-terminal domain {Desulfovibrio gigas [TaxId:
879]}
Length = 152
Score = 25.4 bits (55), Expect = 7.7
Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 4/54 (7%)
Query: 145 WYSVTP--EKVAQHIASRCKASDVVIDGWYSVTPEKVAQHIASRCKASDVVIDG 196
+ S+ EK+A+ +A + + + I S + VI G
Sbjct: 9 YDSMWHSTEKMARVLAESFRDEGCTVKLMWCKACHH--SQIMSEISDAGAVIVG 60
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId:
10090]}
Length = 362
Score = 25.6 bits (55), Expect = 8.9
Identities = 15/80 (18%), Positives = 30/80 (37%), Gaps = 7/80 (8%)
Query: 12 YQDILITYKLSTLSGCAQKVLFNILEDVAYQDILITYKL--STLSGCAQKVLF-NI-LED 67
+ I L L C + L +++ +T L S + ++ + I
Sbjct: 284 MEGAEINKSLLALKECIRA-LGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIAMISPGI 342
Query: 68 VAYQETLNTLPSEFGSQRKK 87
+ + TLNTL + + K+
Sbjct: 343 SSCEYTLNTL--RYADRVKE 360
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.136 0.408
Gapped
Lambda K H
0.267 0.0427 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,328,366
Number of extensions: 65892
Number of successful extensions: 225
Number of sequences better than 10.0: 1
Number of HSP's gapped: 222
Number of HSP's successfully gapped: 47
Length of query: 342
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 256
Effective length of database: 1,226,816
Effective search space: 314064896
Effective search space used: 314064896
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)