Query psy15745
Match_columns 170
No_of_seqs 128 out of 1056
Neff 8.2
Searched_HMMs 29240
Date Fri Aug 16 20:18:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15745.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15745hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qij_A Protein 4.1; cytoskelet 100.0 2.9E-41 1E-45 272.4 12.8 164 4-170 57-233 (296)
2 1ef1_A Moesin; membrane, FERM 100.0 2.5E-38 8.5E-43 254.4 13.2 163 5-170 41-227 (294)
3 1h4r_A Merlin; FERM, neurofibr 100.0 8.2E-38 2.8E-42 253.7 12.8 157 11-170 70-247 (314)
4 2i1j_A Moesin; FERM, coiled-co 100.0 7.2E-36 2.5E-40 259.1 13.1 164 4-170 43-230 (575)
5 3ivf_A Talin-1; FERM domain, c 100.0 7.1E-33 2.4E-37 229.4 13.3 156 11-170 139-313 (371)
6 1mix_A Talin; focal adhesion, 100.0 5E-33 1.7E-37 212.8 10.1 129 38-169 1-147 (206)
7 4f7g_A Talin-1; alpha-helix bu 100.0 5.3E-31 1.8E-35 204.3 11.5 128 41-170 22-159 (222)
8 4dxa_B KREV interaction trappe 100.0 6.1E-32 2.1E-36 220.1 6.5 158 11-170 68-258 (322)
9 2al6_A Focal adhesion kinase 1 99.9 1.8E-28 6.3E-33 203.4 7.4 156 12-169 63-254 (375)
10 3pvl_A Myosin VIIA isoform 1; 99.9 3.3E-28 1.1E-32 213.9 7.4 137 30-170 345-509 (655)
11 3au4_A Myosin-X; protein-prote 99.9 4.9E-26 1.7E-30 197.1 12.1 135 31-170 297-482 (555)
12 4eku_A Protein-tyrosine kinase 99.9 9.6E-23 3.3E-27 169.7 7.1 156 12-168 83-272 (392)
13 2j0j_A Focal adhesion kinase 1 99.8 1E-19 3.4E-24 160.2 9.8 156 12-168 63-253 (656)
14 3epy_A Acyl-COA-binding domain 97.9 4.4E-05 1.5E-09 50.4 7.3 74 55-142 14-88 (89)
15 1hbk_A ACBP, acyl-COA binding 97.9 0.0002 6.7E-09 47.2 9.7 68 61-142 20-88 (89)
16 2cb8_A Acyl-COA-binding protei 97.9 5.6E-05 1.9E-09 49.6 7.0 67 62-142 19-86 (87)
17 2lbb_A Acyl COA binding protei 97.8 9.8E-05 3.4E-09 49.3 7.1 67 62-142 28-95 (96)
18 2cop_A Acyl-coenzyme A binding 97.7 0.0006 2.1E-08 46.5 10.2 75 55-143 18-93 (109)
19 2wh5_A Acyl-COA-binding domain 97.6 0.00015 5.1E-09 49.3 6.7 66 59-138 26-91 (106)
20 1st7_A ACBP, acyl-COA-binding 97.6 0.00029 1E-08 46.1 7.6 62 62-137 18-79 (86)
21 3flv_A Acyl-COA-binding domain 97.6 0.00024 8.1E-09 49.2 6.9 70 59-142 42-112 (119)
22 3fp5_A Acyl-COA binding protei 97.5 0.00032 1.1E-08 47.6 6.7 65 59-137 22-86 (106)
23 2cqu_A Peroxisomal D3,D2-enoyl 97.4 0.00076 2.6E-08 46.5 7.5 67 63-143 34-101 (116)
24 2kc2_A Talin-1, F1; FERM, adhe 75.1 0.77 2.6E-05 31.9 0.6 32 13-44 96-127 (128)
25 3qij_A Protein 4.1; cytoskelet 33.4 20 0.00067 27.8 2.0 55 1-57 126-180 (296)
26 3zxu_A MCM21; cell cycle, COMA 26.5 35 0.0012 26.7 2.3 28 132-163 116-143 (296)
27 1ef1_A Moesin; membrane, FERM 24.1 32 0.0011 26.3 1.7 27 1-27 112-138 (294)
28 1h4r_A Merlin; FERM, neurofibr 23.2 34 0.0012 26.5 1.7 26 1-26 132-157 (314)
29 2js5_A Uncharacterized protein 21.9 1.4E+02 0.0049 18.1 4.1 18 55-73 28-45 (71)
No 1
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=100.00 E-value=2.9e-41 Score=272.40 Aligned_cols=164 Identities=51% Similarity=0.804 Sum_probs=148.3
Q ss_pred CchhHHhh---hchhhcccCCCCCcccccCCCcc-eeeeeeCCCCchHHHHHHHH---------HhhccccccChhHHHH
Q psy15745 4 SYVTYALL---GSYLVQSELGDYDQEEHKGNPDY-LREFKFAPNQTPELEQRVME---------LHKTHKLPCSYVTYAL 70 (170)
Q Consensus 4 ~~~~~~~~---g~~~Wl~~~~~~~~~q~~~~~~~-~~~vkfy~~~~~~l~~~~tr---------di~~g~l~~~~~~~~~ 70 (170)
.+|++.+. +..+|+++.+++ .+|+++.|+. +||+||||++|..+.++++| ||++|++||+.++|++
T Consensus 57 ~~FgL~~~~~~~~~~wLd~~k~i-~~q~~~~~~~l~frvkfy~~~~~~l~~~~tr~l~ylQ~~~dil~G~~~c~~e~a~~ 135 (296)
T 3qij_A 57 DYFGLAIWDNATSKTWLDSAKEI-KKQVRGVPWNFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDIVAGRLPCSFATLAL 135 (296)
T ss_dssp GGEEEEEEEETTEEEECCTTSBH-HHHC---CCEEEEEESSCCSCGGGSSCHHHHHHHHHHHHHHHHHTSSCCCHHHHHH
T ss_pred ceeEEEEEcCCCccchhccchhH-HHhcCCCCcEEEEEEEEeCCCchhccCHHHHHHHHHHHHHHHHcCCCCCCHHHHHH
Confidence 34555543 568999999999 7788777887 99999999999877666665 9999999999999999
Q ss_pred HHHHHHHhhcCCCCccccCCCcCccccccCCCCCchHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCCCCcceeecC
Q psy15745 71 LGSYLVQSELGDYDQEEHKGNPDYLREFKFAPNQTPELEQRVMELHKTHKGQTPAEAELNYLDNAKKLSMYGVVLHPAKD 150 (170)
Q Consensus 71 Laal~~Q~e~Gd~~~~~~~~~~~yl~~~~~lP~~~~~~~~~i~~~h~~~~G~s~~~A~~~yL~~~~~l~~YG~~~f~vkd 150 (170)
||||++|+++|||+++.+. ++|++...++|.+.++|+++|.+.|++++|||+++|+.+||++|++||+||+++|.|++
T Consensus 136 LAAl~~Qae~Gd~~~~~~~--~~yl~~~~~~P~~~~~~~~~I~~~h~~~~g~s~~eA~~~yL~~a~~l~~yG~~~f~vk~ 213 (296)
T 3qij_A 136 LGSYTIQSELGDYDPELHG--VDYVSDFKLAPNQTKELEEKVMELHKSYRSMTPAQADLEFLENAKKLSMYGVDLHKAKD 213 (296)
T ss_dssp HHHHHHHHHHCSCCHHHHT--TCCCTTSCCSSSCCHHHHHHHHHHHHTCCSCCHHHHHHHHHHHHTTSTTTTCEEEEEEC
T ss_pred HHHHHHHHhcCCCCccccc--hhhCcHhhcCCcCHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHhcccccCceEEEEEc
Confidence 9999999999999999998 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEeEcCCeeEEccC
Q psy15745 151 SEGVDIMLGVCASGILVYSE 170 (170)
Q Consensus 151 ~~~~~~~lgI~~~Gi~v~~~ 170 (170)
..|.+++||||.+||.||++
T Consensus 214 ~~~~~~~LgV~~~Gi~v~~~ 233 (296)
T 3qij_A 214 LEGVDIILGVCSSGLLVYKD 233 (296)
T ss_dssp TTSCEEEEEECSSEEEEEET
T ss_pred CCCCEEEEEECCCeEEEEeC
Confidence 99999999999999999974
No 2
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=100.00 E-value=2.5e-38 Score=254.43 Aligned_cols=163 Identities=30% Similarity=0.448 Sum_probs=144.3
Q ss_pred chhHHh---hhchhhcccCCCCCccc-cc-CCCcc-eeeeeeCCCCch-HHHHHHHH---------HhhccccccChhHH
Q psy15745 5 YVTYAL---LGSYLVQSELGDYDQEE-HK-GNPDY-LREFKFAPNQTP-ELEQRVME---------LHKTHKLPCSYVTY 68 (170)
Q Consensus 5 ~~~~~~---~g~~~Wl~~~~~~~~~q-~~-~~~~~-~~~vkfy~~~~~-~l~~~~tr---------di~~g~l~~~~~~~ 68 (170)
+|++.+ .+...|+++.+++ .+| .+ +.|+. +||+||||+++. .+.++++| ||++|++||+.++|
T Consensus 41 ~FgL~~~~~~~~~~wLd~~~~l-~~q~~~~~~~~~l~fr~kf~~~~~~~~l~~~~~~~l~y~Q~~~dil~g~~~~~~e~a 119 (294)
T 1ef1_A 41 FFGLQYQDTKGFSTWLKLNKKV-TAQDVRKESPLLFKFRAKFYPEDVSEELIQDITQRLFFLQVKEGILNDDIYCPPETA 119 (294)
T ss_dssp GEEEEEEBTTSCEEECCSSSBG-GGSCBCCCSSEEEEEEESSCCSCHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCHHHH
T ss_pred eeEEEEECCCCceeecccccCH-HhhccCCCCCEEEEEEEEEECCChHHhhccHHHHHHHHHHHHHHHHcCcccCCHHHH
Confidence 444443 4778999999999 455 33 44676 999999999986 56555554 99999999999999
Q ss_pred HHHHHHHHHhhcCCCCccccCCCcCccccccCCCCC--------chHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCC
Q psy15745 69 ALLGSYLVQSELGDYDQEEHKGNPDYLREFKFAPNQ--------TPELEQRVMELHKTHKGQTPAEAELNYLDNAKKLSM 140 (170)
Q Consensus 69 ~~Laal~~Q~e~Gd~~~~~~~~~~~yl~~~~~lP~~--------~~~~~~~i~~~h~~~~G~s~~~A~~~yL~~~~~l~~ 140 (170)
++||||++|+++|||+++.|. ++|++...++|.+ .++|+++|.+.|++++|||+.+|+.+||++|++||+
T Consensus 120 ~~Laal~~q~~~Gd~~~~~~~--~~~l~~~~~lP~~~~~~~~~~~~~~~~~I~~~~~~~~g~s~~~A~~~yL~~~~~lp~ 197 (294)
T 1ef1_A 120 VLLASYAVQSKYGDFNKEVHK--SGYLAGDKLLPQRVLEQHKLNKDQWEERIQVWHEEHRGMLREDAVLEYLKIAQDLEM 197 (294)
T ss_dssp HHHHHHHHHHHHCSCCTTTSC--TTTTTTCCCSCHHHHHHBCCCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTTSTT
T ss_pred HHHHHHHHHHHhCCCCccccC--hhhccccccCCHHHHhhcCCCHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHcccCc
Confidence 999999999999999999998 8999988999975 368999999999999999999999999999999999
Q ss_pred CCCcceeecCCCCCeEEEeEcCCeeEEccC
Q psy15745 141 YGVVLHPAKDSEGVDIMLGVCASGILVYSE 170 (170)
Q Consensus 141 YG~~~f~vkd~~~~~~~lgI~~~Gi~v~~~ 170 (170)
||+++|.|+|+.|.+++||||++||.||++
T Consensus 198 yG~~~f~v~~~~g~~~~Lgv~~~Gi~v~~~ 227 (294)
T 1ef1_A 198 YGVNYFSIKNKKGSELWLGVDALGLNIYEQ 227 (294)
T ss_dssp TTCEEEEEECTTCCEEEEEEETTEEEEEET
T ss_pred cCceEEeeecCCCCEEEEEEecCcEEEEeC
Confidence 999999999999999999999999999973
No 3
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=100.00 E-value=8.2e-38 Score=253.68 Aligned_cols=157 Identities=29% Similarity=0.449 Sum_probs=141.6
Q ss_pred hhchhhcccCCCCCcccc-c-CCCcc-eeeeeeCCCCch-HHHHHHHH---------HhhccccccChhHHHHHHHHHHH
Q psy15745 11 LGSYLVQSELGDYDQEEH-K-GNPDY-LREFKFAPNQTP-ELEQRVME---------LHKTHKLPCSYVTYALLGSYLVQ 77 (170)
Q Consensus 11 ~g~~~Wl~~~~~~~~~q~-~-~~~~~-~~~vkfy~~~~~-~l~~~~tr---------di~~g~l~~~~~~~~~Laal~~Q 77 (170)
.+...|+++.+++ .+|. + +.|+. +||+||||+++. .+.+++++ ||++|++||+.++|++||||++|
T Consensus 70 ~~~~~wL~~~~~i-~~q~~~~~~~~~l~fr~kf~~~~~~~~l~~~~~~~l~y~Q~~~dil~g~~~~~~e~a~~Laal~~Q 148 (314)
T 1h4r_A 70 KDTVAWLKMDKKV-LDHDVSKEEPVTFHFLAKFYPENAEEELVQEITQHLFFLQVKKQILDEKIYCPPEASVLLASYAVQ 148 (314)
T ss_dssp TTEEEECCTTSBG-GGSSCCCSSSEEEEEEESSCCSSHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHH
T ss_pred CCcCeeCCCccCH-HHcCCCCCCCEEEEEEEEEecCCchhhhcCHHHHHHHHHHHHHHHhCCCccCCHHHHHHHHHHHHH
Confidence 4778999999999 5554 2 34666 999999999986 55555554 99999999999999999999999
Q ss_pred hhcCCCCccccCCCcCccccccCCCCC--------chHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCCCCcceeec
Q psy15745 78 SELGDYDQEEHKGNPDYLREFKFAPNQ--------TPELEQRVMELHKTHKGQTPAEAELNYLDNAKKLSMYGVVLHPAK 149 (170)
Q Consensus 78 ~e~Gd~~~~~~~~~~~yl~~~~~lP~~--------~~~~~~~i~~~h~~~~G~s~~~A~~~yL~~~~~l~~YG~~~f~vk 149 (170)
+++|||+++.|. ++|++...++|.+ .++|+++|.+.|++++|||+.+|+.+||++|++||+||+++|.|+
T Consensus 149 a~~Gd~~~~~~~--~~~~~~~~~lP~~~~~~~~~~~~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~~~lp~yG~~~f~v~ 226 (314)
T 1h4r_A 149 AKYGDYDPSVHK--RGFLAQEELLPKRVINLYQMTPEMWEERITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFAIR 226 (314)
T ss_dssp HHHCSCCTTTSC--TTTTTTCCCSCHHHHTTSCCCHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTSTTTTCEEEEEE
T ss_pred HHHCCCCccccc--hhhcchhhcCCHHHHhhccCCHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHhccCccCceEEEee
Confidence 999999999998 8999888999976 368999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEeEcCCeeEEccC
Q psy15745 150 DSEGVDIMLGVCASGILVYSE 170 (170)
Q Consensus 150 d~~~~~~~lgI~~~Gi~v~~~ 170 (170)
|+.|.+++|||+.+||.||++
T Consensus 227 ~~~g~~~~LgI~~~Gi~v~~~ 247 (314)
T 1h4r_A 227 NKKGTELLLGVDALGLHIYDP 247 (314)
T ss_dssp ETTCCEEEEEECSSEEEEECT
T ss_pred cCCCCEEEEEEeCCceEEEeC
Confidence 999999999999999999973
No 4
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=100.00 E-value=7.2e-36 Score=259.13 Aligned_cols=164 Identities=27% Similarity=0.404 Sum_probs=144.3
Q ss_pred CchhHHh---hhchhhcccCCCCCccc-cc-CCCcc-eeeeeeCCCCch-HHHHHHHH---------HhhccccccChhH
Q psy15745 4 SYVTYAL---LGSYLVQSELGDYDQEE-HK-GNPDY-LREFKFAPNQTP-ELEQRVME---------LHKTHKLPCSYVT 67 (170)
Q Consensus 4 ~~~~~~~---~g~~~Wl~~~~~~~~~q-~~-~~~~~-~~~vkfy~~~~~-~l~~~~tr---------di~~g~l~~~~~~ 67 (170)
.+|++.+ .|...|+++.+++ .+| ++ +.||. +||+||||+++. .+.+++++ ||++|++||+.++
T Consensus 43 ~~FGL~~~d~~~~~~WLd~~k~i-~~q~~~~~~~~~L~FRvkfy~~~~~~~l~d~~t~~LlYlQvk~dIl~G~l~c~~e~ 121 (575)
T 2i1j_A 43 WFFGLQYTDSKGDLTWIKLYKKV-MQQDVKKENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPET 121 (575)
T ss_dssp GGEEEEEEBTTSCEEECCTTSBG-GGSCBCCCSSEEEEEEESSCCSSHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCHHH
T ss_pred cceeEEEEecCcchhHhhccccH-HHhcccCCCCeEEEEEEEEcCCChhhhcCCHHHHHHHHHHHHHHHhCCCCCCCHHH
Confidence 3455543 3677899999999 444 33 45777 999999999886 45555544 9999999999999
Q ss_pred HHHHHHHHHHhhcCCCCccccCCCcCccccccCCCCC--------chHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCC
Q psy15745 68 YALLGSYLVQSELGDYDQEEHKGNPDYLREFKFAPNQ--------TPELEQRVMELHKTHKGQTPAEAELNYLDNAKKLS 139 (170)
Q Consensus 68 ~~~Laal~~Q~e~Gd~~~~~~~~~~~yl~~~~~lP~~--------~~~~~~~i~~~h~~~~G~s~~~A~~~yL~~~~~l~ 139 (170)
+++||||++|+++|||++..|. ++|+....|+|.+ ..+|+.+|...|++++|||+.+|+..||++|++||
T Consensus 122 a~~LAAL~lQae~GDy~~~~~~--~~yl~~~~~lP~~vl~~~~~s~e~~~~~I~~~hk~l~G~s~~eA~~~yL~~a~~lp 199 (575)
T 2i1j_A 122 SVLLASYAVQARHGDHNPAVHG--PGFLANDRLLPQRVTDQHKMSREEWEQSITNWWQEHRGMLREDAMMEYLKIAQDLE 199 (575)
T ss_dssp HHHHHHHHHHHHHCSCCTTTCC--TTTTTTCCCSCHHHHHTBCCCHHHHHHHHHHHHGGGTTCCHHHHHHHHHHHHTTST
T ss_pred HHHHHHHHHHHHhcCCChhhcc--cccccccccCCHHHHhhcCCCHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHhcc
Confidence 9999999999999999999998 8999988999975 35899999999999999999999999999999999
Q ss_pred CCCCcceeecCCCCCeEEEeEcCCeeEEccC
Q psy15745 140 MYGVVLHPAKDSEGVDIMLGVCASGILVYSE 170 (170)
Q Consensus 140 ~YG~~~f~vkd~~~~~~~lgI~~~Gi~v~~~ 170 (170)
+||+++|.|+|+.|.++|||||++||.||++
T Consensus 200 ~YG~~~F~vkd~~g~~l~LGV~~~GI~v~~~ 230 (575)
T 2i1j_A 200 MYGVNYFEIRNKKNTELWLGVDALGLNIYEK 230 (575)
T ss_dssp TTTCEEEEEECTTCCEEEEEECSSEEEEEET
T ss_pred ccCCEEEEEEecCCCEEEEEEcCCeeEEEeC
Confidence 9999999999999999999999999999973
No 5
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=100.00 E-value=7.1e-33 Score=229.37 Aligned_cols=156 Identities=19% Similarity=0.274 Sum_probs=130.1
Q ss_pred hhchhhcccCCCCCcccccCCCcc-eeeeeeCCCCchH-HH---------HHHHHHhhccccccChhHHHHHHHHHHHhh
Q psy15745 11 LGSYLVQSELGDYDQEEHKGNPDY-LREFKFAPNQTPE-LE---------QRVMELHKTHKLPCSYVTYALLGSYLVQSE 79 (170)
Q Consensus 11 ~g~~~Wl~~~~~~~~~q~~~~~~~-~~~vkfy~~~~~~-l~---------~~~trdi~~g~l~~~~~~~~~Laal~~Q~e 79 (170)
.+...|+++.+++ .+|....++. +||+|||++++.. +. .++.+||++|++||+.+++++||||++|++
T Consensus 139 ~~~~~wL~~~k~l-~~q~~~~~~~l~frvKf~~~d~~~~~~D~~~~~l~y~Q~~~dil~G~~~c~~e~a~~LAAl~~qae 217 (371)
T 3ivf_A 139 DDELNWLDHGRTL-REQGVEEHETLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQ 217 (371)
T ss_dssp -----CCCTTSBT-GGGTCCTTCEEEEEECCCCBCSSCBTTCHHHHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHH
T ss_pred chHHHHHhcCchh-HhhCCCCCceEEEEEEEecCCccccCCCHHHHHHHHHHhhHHHhCceeecCHHHHHHHHHHHHHHH
Confidence 3578999999999 6666555666 9999999865431 22 344559999999999999999999999999
Q ss_pred cCCCCccccCCCcCccccccCCCCC---chHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCCCCcceeecCCC-C--
Q psy15745 80 LGDYDQEEHKGNPDYLREFKFAPNQ---TPELEQRVMELHKTHKGQTPAEAELNYLDNAKKLSMYGVVLHPAKDSE-G-- 153 (170)
Q Consensus 80 ~Gd~~~~~~~~~~~yl~~~~~lP~~---~~~~~~~i~~~h~~~~G~s~~~A~~~yL~~~~~l~~YG~~~f~vkd~~-~-- 153 (170)
+|||++..+. .+|+....++|.+ +.. +++|.+.|++++|+|+.+|+.+||++|++||+||+++|.|++.. |
T Consensus 218 ~Gd~~~~~~~--~~~~~l~~~lP~~~~~~~~-e~~I~~~~~~~~g~s~~eA~~~yL~~~~~l~~yG~~~f~vk~~~~g~~ 294 (371)
T 3ivf_A 218 FGPHNEQKHK--AGFLDLKDFLPKEYVKQKG-ERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKN 294 (371)
T ss_dssp HCSCCTTTSC--TTCSCGGGTSCGGGTTSCH-HHHHHHHHHHTTTCCHHHHHHHHHHHHHHSTTTTCEEEEEEEECTTSS
T ss_pred hCCCChhhcc--cchhcccccCCHHHhCchH-HHHHHHHHHHccCCCHHHHHHHHHHHHhcccccCcEEEEEEEeccCCC
Confidence 9999999888 8888888899986 344 89999999999999999999999999999999999999997543 2
Q ss_pred --CeEEEeEcCCeeEEccC
Q psy15745 154 --VDIMLGVCASGILVYSE 170 (170)
Q Consensus 154 --~~~~lgI~~~Gi~v~~~ 170 (170)
.+++||||++||.||++
T Consensus 295 ~~~~~~LgI~~~GI~v~~~ 313 (371)
T 3ivf_A 295 KLVPRLLGITKECVMRVDE 313 (371)
T ss_dssp CEEEEEEEECSSEEEEEET
T ss_pred CCccEEEEEcCCcEEEEcC
Confidence 37999999999999863
No 6
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=100.00 E-value=5e-33 Score=212.83 Aligned_cols=129 Identities=23% Similarity=0.383 Sum_probs=115.8
Q ss_pred eeeCCCCch-HHHHHHHH---------HhhccccccChhHHHHHHHHHHHhhcCCCCccccCCCcCccccccCCCCCc--
Q psy15745 38 FKFAPNQTP-ELEQRVME---------LHKTHKLPCSYVTYALLGSYLVQSELGDYDQEEHKGNPDYLREFKFAPNQT-- 105 (170)
Q Consensus 38 vkfy~~~~~-~l~~~~tr---------di~~g~l~~~~~~~~~Laal~~Q~e~Gd~~~~~~~~~~~yl~~~~~lP~~~-- 105 (170)
||||++++. .+++++++ ||++|++||+.+++++||||++|+++|||+++.|. ++|+...+++|.+.
T Consensus 1 vkf~~~d~~~~~~d~~~~~l~y~Q~~~dil~g~~~~~~~~a~~Laal~~qa~~Gd~~~~~~~--~~~~~~~~~lP~~~~~ 78 (206)
T 1mix_A 1 MKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAGYQCQIQFGPHNEQKHK--PGFLELKDFLPKEYIK 78 (206)
T ss_dssp CCCCCCHHHHHTSCHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHCSCCTTTSC--TTCSCGGGTSCGGGST
T ss_pred CcccCCCCCCCcCCHHHHHHHHHHHHHHHHCCccccCHHHHHHHHHHhhhheecCCCccccc--CCccchHhhCCHHHhh
Confidence 799998876 34444544 99999999999999999999999999999999888 88998889999872
Q ss_pred -hHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCCCCcceeecCCC-C----CeEEEeEcCCeeEEcc
Q psy15745 106 -PELEQRVMELHKTHKGQTPAEAELNYLDNAKKLSMYGVVLHPAKDSE-G----VDIMLGVCASGILVYS 169 (170)
Q Consensus 106 -~~~~~~i~~~h~~~~G~s~~~A~~~yL~~~~~l~~YG~~~f~vkd~~-~----~~~~lgI~~~Gi~v~~ 169 (170)
.+ +++|.+.|++++|||+.+|+.+||++|++||+||+++|.|++.. | .+++|||+++||.+++
T Consensus 79 ~~~-~~~i~~~~~~~~g~s~~~A~~~yL~~~~~l~~yG~~~f~v~~~~~g~~~~~~~~Lgi~~~Gi~~~~ 147 (206)
T 1mix_A 79 QKG-ERKIFMAHKNCGNMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVD 147 (206)
T ss_dssp TCC-HHHHHHHHHHTTTCCHHHHHHHHHHHHHHSTTTTCEEEEEEECCSSCSSCEEEEEEECSSEEEEEE
T ss_pred ccc-HHHHHHHHHHccCCCHHHHHHHHHHHHHhCcccCceEEEEEEccCCCCCcCcEEEEEcccceEEeC
Confidence 33 89999999999999999999999999999999999999998765 4 6999999999999986
No 7
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=99.97 E-value=5.3e-31 Score=204.29 Aligned_cols=128 Identities=21% Similarity=0.367 Sum_probs=112.4
Q ss_pred CCCCchH---HHHHHHHHhhccccccChhHHHHHHHHHHHhhcCCCCccccCCCcCccccccCCCCC--chHHHHHHHHH
Q psy15745 41 APNQTPE---LEQRVMELHKTHKLPCSYVTYALLGSYLVQSELGDYDQEEHKGNPDYLREFKFAPNQ--TPELEQRVMEL 115 (170)
Q Consensus 41 y~~~~~~---l~~~~trdi~~g~l~~~~~~~~~Laal~~Q~e~Gd~~~~~~~~~~~yl~~~~~lP~~--~~~~~~~i~~~ 115 (170)
||+||.. +-.++.+||++|++||+.+++++||||++|+++|||++..+. ++|+....++|.+ ...++++|.+.
T Consensus 22 ~~~Dp~~l~l~ylQ~~~dil~G~~~~~~e~a~~LAal~~Qae~Gd~~~~~~~--~~~~~l~~~lP~~~~~~~~~~~I~~~ 99 (222)
T 4f7g_A 22 SSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHK--AGFLDLKDFLPKEYVKQKGERKIFQA 99 (222)
T ss_dssp ----CCHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHCSCCTTTSC--SSCSCGGGTSCGGGGGGCCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHhCCcccCCHHHHHHHHHHHHHHHHCCCCchhcc--cCccchhhccCHHHHhhhhHHHHHHH
Confidence 6667764 345677799999999999999999999999999999999988 8898888999988 56679999999
Q ss_pred HHhccCCCHHHHHHHHHHHHhcCCCCCCcceeecCCC-C----CeEEEeEcCCeeEEccC
Q psy15745 116 HKTHKGQTPAEAELNYLDNAKKLSMYGVVLHPAKDSE-G----VDIMLGVCASGILVYSE 170 (170)
Q Consensus 116 h~~~~G~s~~~A~~~yL~~~~~l~~YG~~~f~vkd~~-~----~~~~lgI~~~Gi~v~~~ 170 (170)
|++++|+|+.+|+.+||++|++||+||+++|.|++.. | .+++||||++||.||++
T Consensus 100 h~~~~g~s~~eA~~~yL~~~~~l~~yG~~~f~v~~~~~g~~~~~~~~LgI~~~GI~v~~~ 159 (222)
T 4f7g_A 100 HKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDE 159 (222)
T ss_dssp HHTTTTCCHHHHHHHHHHHHHTSTTTTCEEEEEEEECTTSSCEEEEEEEECSSEEEEECT
T ss_pred HHhccCCCHHHHHHHHHHHHhhccccCcEEEEEEEecCCCCCCCCEEEEEcCCcEEEEcC
Confidence 9999999999999999999999999999999998754 3 48999999999999873
No 8
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=99.97 E-value=6.1e-32 Score=220.08 Aligned_cols=158 Identities=16% Similarity=0.244 Sum_probs=125.2
Q ss_pred hhchhhcccCCCCCccccc-CCCcceeeeeeCCC-Cch-HHHH---------HHHHHhhccccccChhHHHHHHHHHHHh
Q psy15745 11 LGSYLVQSELGDYDQEEHK-GNPDYLREFKFAPN-QTP-ELEQ---------RVMELHKTHKLPCSYVTYALLGSYLVQS 78 (170)
Q Consensus 11 ~g~~~Wl~~~~~~~~~q~~-~~~~~~~~vkfy~~-~~~-~l~~---------~~trdi~~g~l~~~~~~~~~Laal~~Q~ 78 (170)
.....|.++.+++.+.... +.|..+||.+||.+ ++. .+.+ ++.+||++|++||+.+++++||||++|+
T Consensus 68 d~~~~W~~~l~~~~~~~~~~~~p~l~~rr~~f~~~~~~~~~~d~~t~~l~y~Q~~~dil~G~~~c~~e~a~~LAAl~~q~ 147 (322)
T 4dxa_B 68 QHVRDWPEILAELTNLDPQRETPQLFLRRDVRLPLEVEKQIEDPLAILILFDEARYNLLKGFYTAPDAKLITLASLLLQI 147 (322)
T ss_dssp HHHHTHHHHHHHHCSCCCCCCCCEEEEEECTTCCHHHHTTCCCHHHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCCceEEEEEEeecccccccccccCHHHHHHHHHHHHHHHHCCcccCCHHHHHHHHHHHHHH
Confidence 3457899998888433232 33555677766654 332 2333 3445999999999999999999999999
Q ss_pred hcCCCCccccCCCcCcccc---ccCCCCC-----chHHHHHHHHHHHhc---cCCCHH--HHHHHHHHHHhcCCCCCCcc
Q psy15745 79 ELGDYDQEEHKGNPDYLRE---FKFAPNQ-----TPELEQRVMELHKTH---KGQTPA--EAELNYLDNAKKLSMYGVVL 145 (170)
Q Consensus 79 e~Gd~~~~~~~~~~~yl~~---~~~lP~~-----~~~~~~~i~~~h~~~---~G~s~~--~A~~~yL~~~~~l~~YG~~~ 145 (170)
++|||++..|. ++|++. ..++|.+ ..+|+++|.+.|+++ +|||++ +|+.+||++|++||+||++|
T Consensus 148 e~Gd~~~~~~~--~~~l~~~~l~~~lP~~~~~~~~~~~~~~I~~~h~~~~~~~g~s~~~a~a~~~yL~~~~~lp~yG~~~ 225 (322)
T 4dxa_B 148 VYGNYESKKHK--QGFLNEENLKSIVPVTKLKSKAPHWTNRILHEYKNLSTSEGVSKEMHHLQRMFLQNCWEIPTYGAAF 225 (322)
T ss_dssp HHCSCCHHHHS--SSCSCHHHHTTTSCTTTTTTTGGGSHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHTSTTTTCEE
T ss_pred HhCCCCccccc--ccccchhhhhhhCCHHHHhcCHHHHHHHHHHHHHhcccccCCChhHHHHHHHHHHHHhcCCCcCeEE
Confidence 99999999998 888863 5689987 467999999999999 999874 57999999999999999999
Q ss_pred eeecC--------CCCCeEEEeEcCCeeEEccC
Q psy15745 146 HPAKD--------SEGVDIMLGVCASGILVYSE 170 (170)
Q Consensus 146 f~vkd--------~~~~~~~lgI~~~Gi~v~~~ 170 (170)
|.|+. ..+.+++||||.+||.||+.
T Consensus 226 f~v~~~~~~~g~~~~~~~~~LgV~~~Gv~v~~~ 258 (322)
T 4dxa_B 226 FTGQIFTKASPSNHKVIPVYVGVNIKGLHLLNM 258 (322)
T ss_dssp EEEEEECC-------EEEEEEEECSSEEEEEET
T ss_pred EEEEEeccCCCCccCCCeEEEEEccCceEEEcC
Confidence 99973 22459999999999999973
No 9
>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A
Probab=99.95 E-value=1.8e-28 Score=203.36 Aligned_cols=156 Identities=10% Similarity=0.065 Sum_probs=125.8
Q ss_pred hchhhcccCCCCCcccc-------cCCCcc-eeeeeeCCCCchHHH--H---------HHHHHhhccc-cccChhHHHHH
Q psy15745 12 GSYLVQSELGDYDQEEH-------KGNPDY-LREFKFAPNQTPELE--Q---------RVMELHKTHK-LPCSYVTYALL 71 (170)
Q Consensus 12 g~~~Wl~~~~~~~~~q~-------~~~~~~-~~~vkfy~~~~~~l~--~---------~~trdi~~g~-l~~~~~~~~~L 71 (170)
+...|+++.+.+ .+++ ...++. .||+||||+++..+. + ++.+|+++|+ +||+.++|++|
T Consensus 63 ~~~~wL~~~~~l-~~~~~k~~~~~~~~~~~l~fRvrF~~~~~~~l~~~D~~t~~~~y~Q~r~Dil~g~~~~~~~e~al~L 141 (375)
T 2al6_A 63 EEVHWLHLDMGV-SNVREKFELAHPPEEWKYELRIRYLPKGFLNQFTEDKPTLNFFYQQVKNDYMLEIADQVDQEIALKL 141 (375)
T ss_dssp SCEEEECTTSBH-HHHHHHHHTTSCGGGEEEEEEECCCCTTHHHHHTTCHHHHHHHHHHHHHHHHHHTTTTSCHHHHHHH
T ss_pred CceEeeCCccch-hhhhhhhhcccCCCceEEEEEEEEecCCHHHhhhcCHHHHHHHHHHHHHHHHcCCCccCCHHHHHHH
Confidence 457899999999 4543 123566 999999999876443 2 2334999999 79999999999
Q ss_pred HHHHHHhhcCCCCccccCC--CcCcccc----ccCCCCC------chHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCC
Q psy15745 72 GSYLVQSELGDYDQEEHKG--NPDYLRE----FKFAPNQ------TPELEQRVMELHKTHKGQTPAEAELNYLDNAKKLS 139 (170)
Q Consensus 72 aal~~Q~e~Gd~~~~~~~~--~~~yl~~----~~~lP~~------~~~~~~~i~~~h~~~~G~s~~~A~~~yL~~~~~l~ 139 (170)
|||++|+++||++...+.. ..+|+.. ..++|.. ..+|+++|.+.|+++.|||+.+|+..||+++++||
T Consensus 142 AaL~~q~~~gD~~~~~~~~k~~~~~l~k~~~l~~flP~~~~~~~~~~~~~k~I~~~~k~~~g~s~~eAk~~yL~~~~~l~ 221 (375)
T 2al6_A 142 GCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESILKFFEILSPVY 221 (375)
T ss_dssp HHHHHHHHTTTSCTTGGGSHHHHHHHHHTTCGGGTSCHHHHHSSCHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHhhhccchhhcccCCHHHhhhcccHHHhCCHHHHHHhChHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHhhcc
Confidence 9999999999997542210 0244432 3789976 26899999999999999999999999999999999
Q ss_pred CCCCcceeecCCCC----CeEEEeEcCCeeEEcc
Q psy15745 140 MYGVVLHPAKDSEG----VDIMLGVCASGILVYS 169 (170)
Q Consensus 140 ~YG~~~f~vkd~~~----~~~~lgI~~~Gi~v~~ 169 (170)
+||+++|.|++..| ..++||++. ||.+++
T Consensus 222 ~yG~~~F~v~~~~~~~~~~~l~lg~~~-GI~~~~ 254 (375)
T 2al6_A 222 RFDKECFKCALGSSWIISVELAIGPEE-GISYLT 254 (375)
T ss_dssp CCSCEEEEEEECSSSCEEEEEEEETTT-EEEEES
T ss_pred cCCcEEEEEeecCCCCcceEEEEecCC-CEEEEe
Confidence 99999999987664 588899875 999985
No 10
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=99.95 E-value=3.3e-28 Score=213.85 Aligned_cols=137 Identities=16% Similarity=0.130 Sum_probs=113.7
Q ss_pred CCCcc-eeeeeeCCCCchHHHHH---------HHHHhhccccccChh-HHHHHHHHHHHhhcCCCCccccCCCcCccccc
Q psy15745 30 GNPDY-LREFKFAPNQTPELEQR---------VMELHKTHKLPCSYV-TYALLGSYLVQSELGDYDQEEHKGNPDYLREF 98 (170)
Q Consensus 30 ~~~~~-~~~vkfy~~~~~~l~~~---------~trdi~~g~l~~~~~-~~~~Laal~~Q~e~Gd~~~~~~~~~~~yl~~~ 98 (170)
+.|+. +||+|||++.+..+.++ +.+||++|++||+.+ ++++||||++|+++|||++..+. ...+.
T Consensus 345 ~~~~~L~FRvkff~p~~~~~~d~it~~LlYlQ~k~dIl~Grlpc~~E~~a~~LAAl~~Qae~Gd~~~~~~~--~~~L~-- 420 (655)
T 3pvl_A 345 NAPWRLFFRKEVFTPWHNPSEDNVATNLIYQQVVRGVKFGEYRCEKEDDLAELASQQYFVDYGSEMILERL--LSLVP-- 420 (655)
T ss_dssp GCCCEEEEEECCCCTTCCGGGCHHHHHHHHHHHHHHHHHTSSCCSSHHHHHHHHHHHHHHHHTTCCCHHHH--HHHHH--
T ss_pred CCCeEEEEEEEEecCCcccccCHHHHHHHHHHHhcccccCccCCChHHHHHHHHHHHHHHHhCCCcchhhH--HHHHH--
Confidence 35777 99999999755433333 445999999999965 99999999999999999865543 22232
Q ss_pred cCCCCC-------chHHHHHHHHHHHhc----cCCCHHHHHHHHHHHH-hcCCCCCCcceeecCCCC-----CeEEEeEc
Q psy15745 99 KFAPNQ-------TPELEQRVMELHKTH----KGQTPAEAELNYLDNA-KKLSMYGVVLHPAKDSEG-----VDIMLGVC 161 (170)
Q Consensus 99 ~~lP~~-------~~~~~~~i~~~h~~~----~G~s~~~A~~~yL~~~-~~l~~YG~~~f~vkd~~~-----~~~~lgI~ 161 (170)
.++|.+ .++|+++|.+.|+++ +|+|+.+|+.+||++| ++||+||++||.|++..| .+++||||
T Consensus 421 ~~lP~~~l~~~~~~~~w~~~I~~~hkk~~~~~~g~s~~eAk~~yL~~a~~~lp~YG~~fF~vk~~~g~~lp~~~l~LgVn 500 (655)
T 3pvl_A 421 TYIPDREITPLKNLEKWAQLAIAAHKKGIYAQRRTDSQKVKEDVVNYARFKWPLLFSRFYEAYKFSGPPLPKSDVIVAVN 500 (655)
T ss_dssp HHSCGGGCCSSSCHHHHHHHHHHHHHHHHHTTCSSCHHHHHHHHHHHHHHHCTTTSCEEEEEEEEESSCCSCSEEEEEEE
T ss_pred HhCCHHHHhccCCHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhccccCcEEEEEEecCCCCCCCccEEEEEc
Confidence 345543 478999999999999 9999999999999999 899999999999988776 58999999
Q ss_pred CCeeEEccC
Q psy15745 162 ASGILVYSE 170 (170)
Q Consensus 162 ~~Gi~v~~~ 170 (170)
..||+||++
T Consensus 501 ~~GV~v~d~ 509 (655)
T 3pvl_A 501 WTGVYFVDE 509 (655)
T ss_dssp TTEEEEECT
T ss_pred CCceEEEcC
Confidence 999999974
No 11
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=99.93 E-value=4.9e-26 Score=197.06 Aligned_cols=135 Identities=19% Similarity=0.214 Sum_probs=110.2
Q ss_pred CCcc-eeeeeeCCCCch---------HHHHHHHHHhhccccccChhHHHHHHHHHHHhhcCCCCccccCCCcCccccccC
Q psy15745 31 NPDY-LREFKFAPNQTP---------ELEQRVMELHKTHKLPCSYVTYALLGSYLVQSELGDYDQEEHKGNPDYLREFKF 100 (170)
Q Consensus 31 ~~~~-~~~vkfy~~~~~---------~l~~~~trdi~~g~l~~~~~~~~~Laal~~Q~e~Gd~~~~~~~~~~~yl~~~~~ 100 (170)
.++. +||++||++... .+-.++.+||++|++||+.+++++||||++|+++||+++.... .+ ...+
T Consensus 297 ~~~~l~fR~~ff~~~~~~~~d~~~~~lly~Q~~~dil~G~~~~~~e~a~~LAAl~lQ~~~GD~~~~~~~--~~---l~~~ 371 (555)
T 3au4_A 297 LPWKFYFKLYCFLDTDNVPKDSVEFAFMFEQAHEAVIHGHHPAPEENLQVLAALRLQYLQGDYTLHAAI--PP---LEEV 371 (555)
T ss_dssp CCCEEEEEEEECSCCTTCCTTSHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHCSCCTTCCC--CC---GGGT
T ss_pred CceEEEEEEEeecCcccCCcchHHHHhhHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHcCCCccccch--hh---hhhh
Confidence 4676 999999975322 2233455699999999999999999999999999999975432 11 1245
Q ss_pred CCCC------------------------------c--------hHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCCC
Q psy15745 101 APNQ------------------------------T--------PELEQRVMELHKTHKGQTPAEAELNYLDNAKKLSMYG 142 (170)
Q Consensus 101 lP~~------------------------------~--------~~~~~~i~~~h~~~~G~s~~~A~~~yL~~~~~l~~YG 142 (170)
+|.+ . .+++++|.+.|++++|||+.+|+..||++|++||+||
T Consensus 372 lP~~~l~~~~~~~~k~~s~~~~~l~~~~~~~~~~~~~W~~~~~~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~~~lp~yG 451 (555)
T 3au4_A 372 YSLQRLKARISQSTKTFSFRTGSVVRQKVEEEQMLDMWIKEEVSSARASIIDKWRKFQGMNQEQAMAKYMALIKEWPGYG 451 (555)
T ss_dssp SCCHHHHHHHHHTTCCEECCTTSCCEECCCCHHHHHHHTHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTSTTTT
T ss_pred CCHHHhhhhhccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCcC
Confidence 5542 1 2348999999999999999999999999999999999
Q ss_pred CcceeecCCCC---CeEEEeEcCCeeEEccC
Q psy15745 143 VVLHPAKDSEG---VDIMLGVCASGILVYSE 170 (170)
Q Consensus 143 ~~~f~vkd~~~---~~~~lgI~~~Gi~v~~~ 170 (170)
+++|.|+++.| ..++|||+.+||.||++
T Consensus 452 ~~~F~v~~~~~~~~~~l~LgV~~~GI~v~~~ 482 (555)
T 3au4_A 452 STLFDVECKEGGFPQELWLGVSADAVSVYKR 482 (555)
T ss_dssp CEEEEEEEEESSSCSEEEEEECSSEEEEEET
T ss_pred ceEEEEEecCCCCCceEEEEEcccceEEECC
Confidence 99999987655 69999999999999863
No 12
>4eku_A Protein-tyrosine kinase 2-beta; proline-rich tyrosine kinase 2, FERM domain, transferase; 3.25A {Homo sapiens}
Probab=99.87 E-value=9.6e-23 Score=169.73 Aligned_cols=156 Identities=11% Similarity=0.044 Sum_probs=120.9
Q ss_pred hchhhcccCCCCCcccccC-------CCcc-eeeeeeCCCCchHHH-H----------HHHHHhhccc-cccChhHHHHH
Q psy15745 12 GSYLVQSELGDYDQEEHKG-------NPDY-LREFKFAPNQTPELE-Q----------RVMELHKTHK-LPCSYVTYALL 71 (170)
Q Consensus 12 g~~~Wl~~~~~~~~~q~~~-------~~~~-~~~vkfy~~~~~~l~-~----------~~trdi~~g~-l~~~~~~~~~L 71 (170)
+..+|+++.+++ .++... .+|. .||+||||.++..|. + +...|+++|+ ++|+.++|++|
T Consensus 83 ~~~~wL~~~~~l-~~v~~k~~~~~~~~~~~~~fRvrF~p~d~~~l~~~D~~~~~ylY~Q~r~D~l~g~~~~~~~e~al~L 161 (392)
T 4eku_A 83 DEIHWLHPQMTV-GEVQDKYECLHVEAEWRYDLQIRYLPEDFMESLKEDRTTLLYFYQQLRNDYMQRYASKVSEGMALQL 161 (392)
T ss_dssp CCEEEECTTSBH-HHHHHHSTTTSCGGGEEEEEEECSCCTTTHHHHTTCHHHHHHHHHHHHHHHHHHTTTTSCHHHHHHH
T ss_pred CceEECCCCCcH-HHHHhhhhhccCCCceEEEEEEEEEcCCHHHhhhcChHHHHHHHHHHHHHHHcCCCCCCCHHHHHHH
Confidence 567999999999 554421 2455 999999999875542 2 2334999998 78999999999
Q ss_pred HHHHHHhhcCCCCccccCC--CcCccc----cccCCCCC------chHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCC
Q psy15745 72 GSYLVQSELGDYDQEEHKG--NPDYLR----EFKFAPNQ------TPELEQRVMELHKTHKGQTPAEAELNYLDNAKKLS 139 (170)
Q Consensus 72 aal~~Q~e~Gd~~~~~~~~--~~~yl~----~~~~lP~~------~~~~~~~i~~~h~~~~G~s~~~A~~~yL~~~~~l~ 139 (170)
|||.+|+++||++...... +..++. ...++|.. ..+|+.+|...|+++.|+|+.+|+..||+.+++||
T Consensus 162 AaL~~q~~~gd~~~~a~~~k~~~~~l~k~~~lk~flP~~l~~~ik~k~~rk~I~~~~kk~~~ls~~eakl~YL~~l~~Lp 241 (392)
T 4eku_A 162 GCLELRRFFKDMPHNALDKKSNFELLEKEVGLDLFFPKQMQENLKPKQFRKMIQQTFQQYASLREEECVMKFFNTLAGFA 241 (392)
T ss_dssp HHHHHHHHTTTSCTTGGGSHHHHHHHHHHTCGGGTSCHHHHHHSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHhhhcchhhhccCCCHHHHhhhccHHHhcCHHHHhhcCHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh
Confidence 9999999999987543110 023332 34688874 35799999999999999999999999999999999
Q ss_pred CCCCcceeecCCCC--CeEEEeEcCCeeEEc
Q psy15745 140 MYGVVLHPAKDSEG--VDIMLGVCASGILVY 168 (170)
Q Consensus 140 ~YG~~~f~vkd~~~--~~~~lgI~~~Gi~v~ 168 (170)
+||+++|.|+...| .+..|.|+++||.+.
T Consensus 242 ~yG~e~F~vk~~s~~~~~~~L~Vg~~GIs~~ 272 (392)
T 4eku_A 242 NIDQETYRCELIQGWNITVDLVIGPKGIRQL 272 (392)
T ss_dssp CCSCEEEEEEEESSSCCCEEEEEETTEEEEE
T ss_pred ccCcEEEEEEeccCCcceeEEEEcCCcEEEE
Confidence 99999999976443 455666666799874
No 13
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.80 E-value=1e-19 Score=160.17 Aligned_cols=156 Identities=10% Similarity=0.028 Sum_probs=123.0
Q ss_pred hchhhcccCCCCCcc------cccC-CCcc-eeeeeeCCCCchHHHHH-----------HHHHhhccccc-cChhHHHHH
Q psy15745 12 GSYLVQSELGDYDQE------EHKG-NPDY-LREFKFAPNQTPELEQR-----------VMELHKTHKLP-CSYVTYALL 71 (170)
Q Consensus 12 g~~~Wl~~~~~~~~~------q~~~-~~~~-~~~vkfy~~~~~~l~~~-----------~trdi~~g~l~-~~~~~~~~L 71 (170)
+...|+++.+++ .+ +++. .+|. .|||||||+++.+|.++ +..|+++|+.+ |+.++|+.|
T Consensus 63 ~~~~wl~~~~~~-~~~~~~~~~~~~~~~~~~~~rvrf~p~~~~~l~~~d~~~~~ylf~Q~r~D~~~~~~~~~~~~~al~L 141 (656)
T 2j0j_A 63 EEVHWLHLDMGV-SNVREKFELAHPPEEWKYELRIRYLPKGFLNQFTEDKPTLNFFYQQVKNDYMLEIADQVDQEIALKL 141 (656)
T ss_dssp CCEEEECTTSBH-HHHHHHHTTTSCTTSEEEEEEECCCCTTHHHHHHTCHHHHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred CceeeeCCCCcH-HHHHhhhcccCCCcceEEEEEEEEcCCCHHHHHhccHHHHHHHHHHHHHHHHhcccccccHhHHHHH
Confidence 668999999999 44 4443 4677 99999999999876322 23399999996 889999999
Q ss_pred HHHHHHhhcCCCCccccCC--CcCccc----cccCCCC------CchHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCC
Q psy15745 72 GSYLVQSELGDYDQEEHKG--NPDYLR----EFKFAPN------QTPELEQRVMELHKTHKGQTPAEAELNYLDNAKKLS 139 (170)
Q Consensus 72 aal~~Q~e~Gd~~~~~~~~--~~~yl~----~~~~lP~------~~~~~~~~i~~~h~~~~G~s~~~A~~~yL~~~~~l~ 139 (170)
|+|.+|.+|||++...... +.+++. -..|+|. +..+++.+|.+.|+++.|+++.+|++.||+.++.++
T Consensus 142 a~l~~~~~~~d~~~~a~~~~~~~~~~~k~~~~~~fiP~~~~~~~~~~~~~k~i~~~~k~~~~~~~~~~~lk~l~~l~~~~ 221 (656)
T 2j0j_A 142 GCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESILKFFEILSPVY 221 (656)
T ss_dssp HHHHHHHHTTTSCTTGGGSHHHHHHHHHTTTGGGTSCHHHHHHSCHHHHHHHHHHHHGGGTTCCHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHhhhccchhhhcCCCHHHHHhhccHHHhCCHHHHHHhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcccc
Confidence 9999999999996442110 022322 2468894 456889999999999999999999999999999999
Q ss_pred CCCCcceeecCCCCCe--EEEeEcCC-eeEEc
Q psy15745 140 MYGVVLHPAKDSEGVD--IMLGVCAS-GILVY 168 (170)
Q Consensus 140 ~YG~~~f~vkd~~~~~--~~lgI~~~-Gi~v~ 168 (170)
+||+..|+|++..|.. +-|.|+++ ||...
T Consensus 222 ~yg~e~f~~~~~~g~~~~~~l~vg~~~GI~~~ 253 (656)
T 2j0j_A 222 RFDKECFKCALGSSWIISVELAIGPEEGISYL 253 (656)
T ss_dssp CTTSEEEEEEEESSSEEEEEEEEETTTEEEEC
T ss_pred ccCceEEeeccCCCCcccEEEEECCCCCeEEE
Confidence 9999999999888743 55555554 98864
No 14
>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1
Probab=97.92 E-value=4.4e-05 Score=50.36 Aligned_cols=74 Identities=22% Similarity=0.209 Sum_probs=54.1
Q ss_pred HhhccccccChhHHHHHHHHHHHhhcCCCCccccCCCcCccccccCCCCCchHHHHHHHHHHHhccCCCHHHHHHHHHHH
Q psy15745 55 LHKTHKLPCSYVTYALLGSYLVQSELGDYDQEEHKGNPDYLREFKFAPNQTPELEQRVMELHKTHKGQTPAEAELNYLDN 134 (170)
Q Consensus 55 di~~g~l~~~~~~~~~Laal~~Q~e~Gd~~~~~~~~~~~yl~~~~~lP~~~~~~~~~i~~~h~~~~G~s~~~A~~~yL~~ 134 (170)
.|.+..-..+.++.++|=||--||..||++... ++++. -..+.=.+.|+++.|||+++|+..|+++
T Consensus 14 ~vk~l~~~p~~~~~L~lYalyKQAt~Gd~~~~~----Pg~~d----------~~~~aKw~AW~~l~g~s~eeA~~~Yi~~ 79 (89)
T 3epy_A 14 DVRKLKARPDDGELKELYGLYKQAIVGDINIAC----PGMLD----------LKGKAKWEAWNLKKGLSTEDATSAYISK 79 (89)
T ss_dssp HGGGCSSCCCHHHHHHHHHHHHHHHTCSCCSCC----TTTTC----------HHHHHHHHHHHTTTTCCHHHHHHHHHHH
T ss_pred HHHHcCCCcCHHHHHHHHHHHHHHhhCCCCCCC----Ccccc----------hHHHHHHHHHHHhhCCCHHHHHHHHHHH
Confidence 444433455778999999999999999988543 23221 1233335689999999999999999999
Q ss_pred Hhc-CCCCC
Q psy15745 135 AKK-LSMYG 142 (170)
Q Consensus 135 ~~~-l~~YG 142 (170)
+.+ .+.||
T Consensus 80 v~~l~~ky~ 88 (89)
T 3epy_A 80 AKELIEKYG 88 (89)
T ss_dssp HHHHHHHHC
T ss_pred HHHHhhhhc
Confidence 976 45555
No 15
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1
Probab=97.86 E-value=0.0002 Score=47.20 Aligned_cols=68 Identities=18% Similarity=0.255 Sum_probs=52.4
Q ss_pred cccChhHHHHHHHHHHHhhcCCCCccccCCCcCccccccCCCCCchHHHHHHHHHHHhccCCCHHHHHHHHHHHHhc-CC
Q psy15745 61 LPCSYVTYALLGSYLVQSELGDYDQEEHKGNPDYLREFKFAPNQTPELEQRVMELHKTHKGQTPAEAELNYLDNAKK-LS 139 (170)
Q Consensus 61 l~~~~~~~~~Laal~~Q~e~Gd~~~~~~~~~~~yl~~~~~lP~~~~~~~~~i~~~h~~~~G~s~~~A~~~yL~~~~~-l~ 139 (170)
...+.++.++|=||--||..||++... ++.+ .-..+.=.+.|+++.|||+++|+..|++++.+ .|
T Consensus 20 ~~~~~~~~L~LYalyKQAt~Gd~~~~~----Pg~~----------d~~~~aKw~AW~~l~gms~eeA~~~YI~~v~~l~~ 85 (89)
T 1hbk_A 20 INLPNELKLDLYKYYKQSTIGNCNIKE----PSAH----------KYIDRKKYEAWKSVENLNREDAQKRYVDIVSEIFP 85 (89)
T ss_dssp CCCCHHHHHHHHHHHHHHHTCSCCSCC----CCTT----------SHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHCT
T ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCC----CCcc----------CHHhHHHHHHHHHhcCCCHHHHHHHHHHHHHHHcc
Confidence 446789999999999999999998533 2322 11233346799999999999999999999876 66
Q ss_pred CCC
Q psy15745 140 MYG 142 (170)
Q Consensus 140 ~YG 142 (170)
.|+
T Consensus 86 ~~~ 88 (89)
T 1hbk_A 86 YWQ 88 (89)
T ss_dssp TTT
T ss_pred ccc
Confidence 665
No 16
>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A
Probab=97.86 E-value=5.6e-05 Score=49.64 Aligned_cols=67 Identities=19% Similarity=0.267 Sum_probs=50.9
Q ss_pred ccChhHHHHHHHHHHHhhcCCCCccccCCCcCccccccCCCCCchHHHHHHHHHHHhccCCCHHHHHHHHHHHHhc-CCC
Q psy15745 62 PCSYVTYALLGSYLVQSELGDYDQEEHKGNPDYLREFKFAPNQTPELEQRVMELHKTHKGQTPAEAELNYLDNAKK-LSM 140 (170)
Q Consensus 62 ~~~~~~~~~Laal~~Q~e~Gd~~~~~~~~~~~yl~~~~~lP~~~~~~~~~i~~~h~~~~G~s~~~A~~~yL~~~~~-l~~ 140 (170)
..+.++.++|=||--|+..||++... ++.+. -..+.=.+.|.++.|||+++|+..|++++.+ .+.
T Consensus 19 ~~~~~~~L~lYalyKQAt~Gd~~~~~----Pg~~d----------~~~~aKw~AW~~l~gms~eeA~~~Yi~~v~~l~~~ 84 (87)
T 2cb8_A 19 KPSDEEMLFIYGHYKQATVGDINTER----PGMLD----------FTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKK 84 (87)
T ss_dssp CCCHHHHHHHHHHHHHHHTCSCCSCC----CCTTC----------HHHHHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHhhhhCCCCCCC----CCccc----------HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 45788999999999999999998433 33321 1233346799999999999999999999876 444
Q ss_pred CC
Q psy15745 141 YG 142 (170)
Q Consensus 141 YG 142 (170)
||
T Consensus 85 ~~ 86 (87)
T 2cb8_A 85 YG 86 (87)
T ss_dssp HC
T ss_pred hC
Confidence 44
No 17
>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}
Probab=97.77 E-value=9.8e-05 Score=49.31 Aligned_cols=67 Identities=18% Similarity=0.223 Sum_probs=51.6
Q ss_pred ccChhHHHHHHHHHHHhhcCCCCccccCCCcCccccccCCCCCchHHHHHHHHHHHhccCCCHHHHHHHHHHHHhc-CCC
Q psy15745 62 PCSYVTYALLGSYLVQSELGDYDQEEHKGNPDYLREFKFAPNQTPELEQRVMELHKTHKGQTPAEAELNYLDNAKK-LSM 140 (170)
Q Consensus 62 ~~~~~~~~~Laal~~Q~e~Gd~~~~~~~~~~~yl~~~~~lP~~~~~~~~~i~~~h~~~~G~s~~~A~~~yL~~~~~-l~~ 140 (170)
..+.++.++|=||--|+..||++... ++.+. -..+.=.+.|+++.|||+++|+..|++++.+ .|.
T Consensus 28 ~ps~~~~L~LYaLyKQAt~Gd~~~~~----Pg~~d----------~~graKw~AW~~l~gmS~eeAm~~YI~lv~~l~~~ 93 (96)
T 2lbb_A 28 MASNDDKLCFYKYYKQATVGDCNKPK----PGMLQ----------LQEKYKWEAWNALRGMSTESAKEAYVKLLDTLAPS 93 (96)
T ss_dssp CCCTTTTTHHHHHHHHTTTSSCCCCC----CCSSC----------SHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHCGG
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCC----CCccc----------HHhHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhch
Confidence 45778899999999999999998533 33331 1133337799999999999999999999876 566
Q ss_pred CC
Q psy15745 141 YG 142 (170)
Q Consensus 141 YG 142 (170)
||
T Consensus 94 ~~ 95 (96)
T 2lbb_A 94 WR 95 (96)
T ss_dssp GT
T ss_pred hc
Confidence 65
No 18
>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.68 E-value=0.0006 Score=46.54 Aligned_cols=75 Identities=16% Similarity=0.147 Sum_probs=55.4
Q ss_pred HhhccccccChhHHHHHHHHHHHhhcCCCCccccCCCcCccccccCCCCCchHHHHHHHHHHHhccCCCHHHHHHHHHHH
Q psy15745 55 LHKTHKLPCSYVTYALLGSYLVQSELGDYDQEEHKGNPDYLREFKFAPNQTPELEQRVMELHKTHKGQTPAEAELNYLDN 134 (170)
Q Consensus 55 di~~g~l~~~~~~~~~Laal~~Q~e~Gd~~~~~~~~~~~yl~~~~~lP~~~~~~~~~i~~~h~~~~G~s~~~A~~~yL~~ 134 (170)
.|....-..+.++.++|=||--||..||++... +.++. -..+.=.+.|+++.|||+++|+..|+++
T Consensus 18 ~vk~l~~~p~~~~~L~LYaLyKQAt~Gd~~~~~----Pg~~d----------~~~raKw~AW~~l~gms~eeAm~~YI~l 83 (109)
T 2cop_A 18 HLQGLIQVASREQLLYLYARYKQVKVGNCNTPK----PSFFD----------FEGKQKWEAWKALGDSSPSQAMQEYIAV 83 (109)
T ss_dssp HHTTSTTTSCHHHHHHHHHHHHHHHTCSCCSCC----CCSSC----------HHHHHHHHHHHSCTTCCHHHHHHHHHHH
T ss_pred HHHHcccCCCHHHHHHHHHHHHHhhcCCCCCCC----CCccC----------HHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 444333345789999999999999999998643 33321 1233337799999999999999999999
Q ss_pred Hhc-CCCCCC
Q psy15745 135 AKK-LSMYGV 143 (170)
Q Consensus 135 ~~~-l~~YG~ 143 (170)
+.+ .|.|+.
T Consensus 84 v~~l~~~~~~ 93 (109)
T 2cop_A 84 VKKLDPGWNP 93 (109)
T ss_dssp HHHHCTTCCC
T ss_pred HHHHhhhhcc
Confidence 977 566663
No 19
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=97.64 E-value=0.00015 Score=49.32 Aligned_cols=66 Identities=17% Similarity=0.183 Sum_probs=50.7
Q ss_pred cccccChhHHHHHHHHHHHhhcCCCCccccCCCcCccccccCCCCCchHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcC
Q psy15745 59 HKLPCSYVTYALLGSYLVQSELGDYDQEEHKGNPDYLREFKFAPNQTPELEQRVMELHKTHKGQTPAEAELNYLDNAKKL 138 (170)
Q Consensus 59 g~l~~~~~~~~~Laal~~Q~e~Gd~~~~~~~~~~~yl~~~~~lP~~~~~~~~~i~~~h~~~~G~s~~~A~~~yL~~~~~l 138 (170)
|....+.++.++|=||--|+..||++... ++.+. -..+.=.+.|+++.|||+++|+..|++++.++
T Consensus 26 g~~~ps~e~~L~LYaLyKQAt~Gd~~~~~----Pg~~d----------~~~~aKw~AW~~l~gms~eeA~~~YI~~v~~l 91 (106)
T 2wh5_A 26 GSYRPSYEEMLRFYSYYKQATMGPCLVPR----PGFWD----------PIGRYKWDAWNSLGKMSREEAMSAYITEMKLV 91 (106)
T ss_dssp CSCCCCHHHHHHHHHHHHHHHHCSCCSCC----CCTTC----------HHHHHHHHHHHTTTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhhhccCCCCCCC----CCccc----------HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 44567889999999999999999997433 23321 12333367999999999999999999998753
No 20
>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae}
Probab=97.62 E-value=0.00029 Score=46.08 Aligned_cols=62 Identities=23% Similarity=0.270 Sum_probs=48.3
Q ss_pred ccChhHHHHHHHHHHHhhcCCCCccccCCCcCccccccCCCCCchHHHHHHHHHHHhccCCCHHHHHHHHHHHHhc
Q psy15745 62 PCSYVTYALLGSYLVQSELGDYDQEEHKGNPDYLREFKFAPNQTPELEQRVMELHKTHKGQTPAEAELNYLDNAKK 137 (170)
Q Consensus 62 ~~~~~~~~~Laal~~Q~e~Gd~~~~~~~~~~~yl~~~~~lP~~~~~~~~~i~~~h~~~~G~s~~~A~~~yL~~~~~ 137 (170)
..+.++.++|=||--|+..||++... ++.+ .-..+.=.+.|.++.|||+++|+..|++++.+
T Consensus 18 ~~~~~~~L~lYalyKQAt~Gd~~~~~----Pg~~----------d~~~raKw~AW~~l~gms~eeA~~~YI~~v~~ 79 (86)
T 1st7_A 18 KPSTDELLELYALYKQATVGDNDKEK----PGIF----------NMKDRYKWEAWENLKGKSQEDAEKEYIALVDQ 79 (86)
T ss_dssp CCCHHHHHHHHHHHHHHHHCSCCCCC----CCSS----------CHHHHHHHHHHHTTTTTHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHhhCCCCCCC----CCcc----------CHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 45678999999999999999998533 3322 11233346799999999999999999999876
No 21
>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}
Probab=97.57 E-value=0.00024 Score=49.22 Aligned_cols=70 Identities=13% Similarity=0.139 Sum_probs=52.3
Q ss_pred cccccChhHHHHHHHHHHHhhcCCCCccccCCCcCccccccCCCCCchHHHHHHHHHHHhccCCCHHHHHHHHHHHHhc-
Q psy15745 59 HKLPCSYVTYALLGSYLVQSELGDYDQEEHKGNPDYLREFKFAPNQTPELEQRVMELHKTHKGQTPAEAELNYLDNAKK- 137 (170)
Q Consensus 59 g~l~~~~~~~~~Laal~~Q~e~Gd~~~~~~~~~~~yl~~~~~lP~~~~~~~~~i~~~h~~~~G~s~~~A~~~yL~~~~~- 137 (170)
|....+.++.++|=||--||..||++.... +++. -..+.=.+.|+++.|||+++|+..|++++.+
T Consensus 42 g~~~ps~d~~L~LYaLyKQAT~Gd~~~~~P----g~~d----------~~graKw~AW~~l~gmS~eeAm~~YI~~v~~l 107 (119)
T 3flv_A 42 GSFQPTNEMMLKFYSFYKQATEGPCKLSRP----GFWD----------PIGRYKWDAWSSLGDMTKEEAMIAYVEEMKKI 107 (119)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHTCSCCSCCC----CTTC----------HHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHhcCCCCCCCC----CccC----------HHHHHHHHHHHHccCCCHHHHHHHHHHHHHHH
Confidence 444568899999999999999999974432 3221 1233346699999999999999999999876
Q ss_pred CCCCC
Q psy15745 138 LSMYG 142 (170)
Q Consensus 138 l~~YG 142 (170)
++.|+
T Consensus 108 ~~~~~ 112 (119)
T 3flv_A 108 IETMP 112 (119)
T ss_dssp HHHSC
T ss_pred HhhCC
Confidence 34443
No 22
>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0
Probab=97.50 E-value=0.00032 Score=47.63 Aligned_cols=65 Identities=14% Similarity=0.188 Sum_probs=50.3
Q ss_pred cccccChhHHHHHHHHHHHhhcCCCCccccCCCcCccccccCCCCCchHHHHHHHHHHHhccCCCHHHHHHHHHHHHhc
Q psy15745 59 HKLPCSYVTYALLGSYLVQSELGDYDQEEHKGNPDYLREFKFAPNQTPELEQRVMELHKTHKGQTPAEAELNYLDNAKK 137 (170)
Q Consensus 59 g~l~~~~~~~~~Laal~~Q~e~Gd~~~~~~~~~~~yl~~~~~lP~~~~~~~~~i~~~h~~~~G~s~~~A~~~yL~~~~~ 137 (170)
|....+.++.+.|=||--|+..||++... ++++. -..+.=.+.|+++.|||+++|+..|++++.+
T Consensus 22 g~~~ps~~~~L~LYalyKQAt~Gd~~~~~----Pg~~d----------~~~raKw~AW~~l~gmS~eeA~~~YI~~v~~ 86 (106)
T 3fp5_A 22 GPIKPTQDEQLYFYKYFKQATVGDVNISR----PGLMD----------FTGKAKWDAWKSVEGTSKEVAYQKYVEKLLE 86 (106)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHTCSCCSCC----CCTTC----------HHHHHHHHHHHTTTTCCHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHhcCCCCCCC----CCccc----------hHHHHHHHHHHHccCCCHHHHHHHHHHHHHH
Confidence 44567889999999999999999988542 23221 1233336799999999999999999999865
No 23
>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.38 E-value=0.00076 Score=46.49 Aligned_cols=67 Identities=12% Similarity=0.066 Sum_probs=50.9
Q ss_pred cChhHHHHHHHHHHHhhcCCCCccccCCCcCccccccCCCCCchHHHHHHHHHHHhccCCCHHHHHHHHHHHHhc-CCCC
Q psy15745 63 CSYVTYALLGSYLVQSELGDYDQEEHKGNPDYLREFKFAPNQTPELEQRVMELHKTHKGQTPAEAELNYLDNAKK-LSMY 141 (170)
Q Consensus 63 ~~~~~~~~Laal~~Q~e~Gd~~~~~~~~~~~yl~~~~~lP~~~~~~~~~i~~~h~~~~G~s~~~A~~~yL~~~~~-l~~Y 141 (170)
.+.++.++|=||--|+..||++... ++.+. -..+.=.+.|+++.|||+++|+..|++++.+ .|.|
T Consensus 34 p~~~~~L~LYaLyKQAt~Gd~~~~~----Pg~~d----------~~graKw~AW~~l~gms~eeAm~~YI~lv~~l~~~~ 99 (116)
T 2cqu_A 34 PGNEVKLKLYALYKQATEGPCNMPK----PGVFD----------LINKAKWDAWNALGSLPKEAARQNYVDLVSSLSPSL 99 (116)
T ss_dssp CCHHHHHHHHHHHTTTTTCSCCSCC----CCTTC----------HHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHHCSCC
T ss_pred CCHHHHHHHHHHHHHHhcCCCCCCC----CCccc----------HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHcccc
Confidence 4678999999999999999998432 33321 1233336799999999999999999999877 5655
Q ss_pred CC
Q psy15745 142 GV 143 (170)
Q Consensus 142 G~ 143 (170)
+.
T Consensus 100 ~~ 101 (116)
T 2cqu_A 100 ES 101 (116)
T ss_dssp CC
T ss_pred cc
Confidence 53
No 24
>2kc2_A Talin-1, F1; FERM, adhesion, cell membrane, cell projection, cytoplasm, cytoskeleton, membrane, phosphoprotein, structural protein; NMR {Mus musculus}
Probab=75.13 E-value=0.77 Score=31.86 Aligned_cols=32 Identities=9% Similarity=-0.044 Sum_probs=24.7
Q ss_pred chhhcccCCCCCcccccCCCcceeeeeeCCCC
Q psy15745 13 SYLVQSELGDYDQEEHKGNPDYLREFKFAPNQ 44 (170)
Q Consensus 13 ~~~Wl~~~~~~~~~q~~~~~~~~~~vkfy~~~ 44 (170)
..+|+|..+++.++.+.......+|.|||-.+
T Consensus 96 ~~~WLD~srtL~EQGI~e~~tllLRrKfffsd 127 (128)
T 2kc2_A 96 ELNWLDHGRTLREQGVEEHETLLLRRKFFYSD 127 (128)
T ss_dssp SEEEECSSSCHHHHTCCTTSEEEEEESSCCCC
T ss_pred CCCcccCCCcHHHcCCCCCCEEEEEEEEeccC
Confidence 35899999999666666555559999998764
No 25
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=33.40 E-value=20 Score=27.82 Aligned_cols=55 Identities=67% Similarity=1.043 Sum_probs=38.5
Q ss_pred CCCCchhHHhhhchhhcccCCCCCcccccCCCcceeeeeeCCCCchHHHHHHHHHhh
Q psy15745 1 LPCSYVTYALLGSYLVQSELGDYDQEEHKGNPDYLREFKFAPNQTPELEQRVMELHK 57 (170)
Q Consensus 1 l~c~~~~~~~~g~~~Wl~~~~~~~~~q~~~~~~~~~~vkfy~~~~~~l~~~~trdi~ 57 (170)
++|+...++.+++..-+...|++++.. +...+. -.-+|.|.+...+.+.+.....
T Consensus 126 ~~c~~e~a~~LAAl~~Qae~Gd~~~~~-~~~~yl-~~~~~~P~~~~~~~~~I~~~h~ 180 (296)
T 3qij_A 126 LPCSFATLALLGSYTIQSELGDYDPEL-HGVDYV-SDFKLAPNQTKELEEKVMELHK 180 (296)
T ss_dssp SCCCHHHHHHHHHHHHHHHHCSCCHHH-HTTCCC-TTSCCSSSCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCCccc-cchhhC-cHhhcCCcCHHHHHHHHHHHHH
Confidence 689999999999999999999995433 221121 1245777777777777666443
No 26
>3zxu_A MCM21; cell cycle, COMA complex, protein complex, cell division; 3.70A {Kluyveromyces lactis}
Probab=26.49 E-value=35 Score=26.71 Aligned_cols=28 Identities=25% Similarity=0.425 Sum_probs=19.6
Q ss_pred HHHHhcCCCCCCcceeecCCCCCeEEEeEcCC
Q psy15745 132 LDNAKKLSMYGVVLHPAKDSEGVDIMLGVCAS 163 (170)
Q Consensus 132 L~~~~~l~~YG~~~f~vkd~~~~~~~lgI~~~ 163 (170)
++.+-++ +|+|+|+++|.. +-+|||--+
T Consensus 116 lENlYRm--fGITaFPv~DP~--~~lLGIRfD 143 (296)
T 3zxu_A 116 WENSVRL--IGVSLFPVNYDN--IEFMGIRLE 143 (296)
T ss_dssp HHHHHHT--TSEEEEEEECSS--BEEEEEEEC
T ss_pred HHHHHHh--hcceeeeeeCCC--CCeEEEEEE
Confidence 4445555 699999999983 456887543
No 27
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=24.14 E-value=32 Score=26.26 Aligned_cols=27 Identities=44% Similarity=0.687 Sum_probs=23.8
Q ss_pred CCCCchhHHhhhchhhcccCCCCCccc
Q psy15745 1 LPCSYVTYALLGSYLVQSELGDYDQEE 27 (170)
Q Consensus 1 l~c~~~~~~~~g~~~Wl~~~~~~~~~q 27 (170)
++|+...++.+++...+...|++++..
T Consensus 112 ~~~~~e~a~~Laal~~q~~~Gd~~~~~ 138 (294)
T 1ef1_A 112 IYCPPETAVLLASYAVQSKYGDFNKEV 138 (294)
T ss_dssp SCCCHHHHHHHHHHHHHHHHCSCCTTT
T ss_pred ccCCHHHHHHHHHHHHHHHhCCCCccc
Confidence 689999999999999999999995443
No 28
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=23.22 E-value=34 Score=26.46 Aligned_cols=26 Identities=42% Similarity=0.704 Sum_probs=23.5
Q ss_pred CCCCchhHHhhhchhhcccCCCCCcc
Q psy15745 1 LPCSYVTYALLGSYLVQSELGDYDQE 26 (170)
Q Consensus 1 l~c~~~~~~~~g~~~Wl~~~~~~~~~ 26 (170)
++|+...++.+++...+...+++++.
T Consensus 132 ~~~~~e~a~~Laal~~Qa~~Gd~~~~ 157 (314)
T 1h4r_A 132 IYCPPEASVLLASYAVQAKYGDYDPS 157 (314)
T ss_dssp SCCCHHHHHHHHHHHHHHHHCSCCTT
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCCcc
Confidence 68999999999999999999999544
No 29
>2js5_A Uncharacterized protein; homodimer, protein structure, spectroscopy, structural genomics, PSI-2, protein structure initiative; NMR {Methylococcus capsulatus}
Probab=21.88 E-value=1.4e+02 Score=18.12 Aligned_cols=18 Identities=11% Similarity=0.104 Sum_probs=13.4
Q ss_pred HhhccccccChhHHHHHHH
Q psy15745 55 LHKTHKLPCSYVTYALLGS 73 (170)
Q Consensus 55 di~~g~l~~~~~~~~~Laa 73 (170)
|+.+| +|.+-+....+|.
T Consensus 28 DLaEd-LP~~w~~i~~vA~ 45 (71)
T 2js5_A 28 DLAED-LPTGWNRIMEVAE 45 (71)
T ss_dssp HHHHS-TTTSGGGHHHHHH
T ss_pred HHhcc-chhhHHHHHHHHH
Confidence 89998 9998666655554
Done!