Query psy15746
Match_columns 760
No_of_seqs 197 out of 240
Neff 3.7
Searched_HMMs 46136
Date Fri Aug 16 20:19:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15746.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15746hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2735|consensus 100.0 6E-147 1E-151 1161.1 25.0 398 4-585 34-431 (466)
2 PLN02930 CDP-diacylglycerol-se 100.0 9E-121 2E-125 961.8 29.4 311 128-469 34-353 (353)
3 PF03034 PSS: Phosphatidyl ser 100.0 6E-107 1E-111 837.4 24.9 274 159-463 1-280 (280)
4 KOG2735|consensus 100.0 6.3E-69 1.4E-73 568.7 16.3 380 84-684 57-453 (466)
5 PF03034 PSS: Phosphatidyl ser 99.9 1.1E-24 2.4E-29 226.7 0.7 210 249-548 50-280 (280)
6 PLN02930 CDP-diacylglycerol-se 99.9 9E-23 1.9E-27 217.6 1.0 200 263-553 139-352 (353)
7 PF07331 TctB: Tripartite tric 54.4 1.1E+02 0.0023 28.7 9.3 42 61-102 3-45 (141)
8 PF06664 MIG-14_Wnt-bd: Wnt-bi 46.6 2.2E+02 0.0048 30.5 11.4 75 104-182 208-293 (298)
9 PF11457 DUF3021: Protein of u 35.2 3.9E+02 0.0084 25.2 10.0 116 64-192 13-132 (136)
10 PF10277 Frag1: Frag1/DRAM/Sfk 34.3 2.8E+02 0.0061 27.3 9.2 94 87-183 50-143 (215)
11 PF03348 Serinc: Serine incorp 30.3 99 0.0022 35.6 6.0 65 90-167 73-141 (429)
12 KOG1543|consensus 29.9 41 0.00089 37.0 2.8 28 608-635 134-163 (325)
13 smart00645 Pept_C1 Papain fami 28.1 50 0.0011 32.6 2.8 30 607-636 24-54 (174)
14 cd02621 Peptidase_C1A_Cathepsi 26.5 55 0.0012 33.8 2.9 31 607-637 28-65 (243)
15 PF02044 Bombesin: Bombesin-li 25.5 22 0.00049 22.9 -0.1 9 722-730 3-11 (14)
16 KOG0252|consensus 24.8 1.7E+02 0.0037 34.9 6.6 32 161-192 221-252 (538)
17 PF12794 MscS_TM: Mechanosensi 21.2 6.8E+02 0.015 27.8 10.1 80 12-91 27-120 (340)
18 PF10777 YlaC: Inner membrane 21.1 1.3E+02 0.0028 30.6 4.1 27 84-113 29-55 (155)
19 TIGR03097 PEP_O_lig_1 probable 21.0 1.2E+03 0.026 26.1 12.9 52 31-83 34-94 (402)
20 COG4194 Predicted membrane pro 20.3 1.8E+02 0.004 33.0 5.5 82 644-738 253-338 (350)
No 1
>KOG2735|consensus
Probab=100.00 E-value=5.9e-147 Score=1161.11 Aligned_cols=398 Identities=49% Similarity=0.964 Sum_probs=377.3
Q ss_pred ccchhhccccccccceeecccceeeeechhhHHHHHHHHHHHHhhhhcccCCCCcccchhhhHHHHHHHHhhhhhcccCC
Q psy15746 4 NDKKVFSEKFSLINECAVEDISLDVFYKPHTIAALLCSIFGVIVASFIRNEDVSETDNIWAGLIAVIFFLLLISTLAFPN 83 (760)
Q Consensus 4 ~~~~~~~~~f~~ine~~vdDit~~fFYkPHTiT~L~i~~~~LiY~Af~~d~~~~~~~Ni~rGv~a~i~~FLv~s~l~fPd 83 (760)
+|...+++||+++|||+|||+|+||||||||||+|++++|.++|+|+++|++++++.|+|||++|++++||++|++||||
T Consensus 34 r~e~~~~~~~~~~ne~~vdDit~dffykphTiTlL~i~~~~l~y~a~~~~~~~~t~~N~~rGil~~i~~FL~~svlafpn 113 (466)
T KOG2735|consen 34 RDELHEKMHFRMINERVVDDITTDFFYKPHTITLLLILICFLIYKAFTGDTENTTETNVKRGILAMIAVFLIISVLAFPN 113 (466)
T ss_pred hhhhhhhhccCccceeeeccchhhheecCceehHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 33444699999999999999999999999999999999999999999999977889999999999999999999999999
Q ss_pred CCccCCchhHHHHHHHHHHHHHHHHHHHHHhccccceecCCCCCcchhhHhhHHHHHHHHHHHhhccCCCCCccCCCcch
Q psy15746 84 GPFTRPHPAVWRMVFGLSIFYLLALLFLLFQNYETAICRNEDVSETDNIWAGLIAVIFFLLLISTLAFPNGPFTRPHPAV 163 (760)
Q Consensus 84 GpF~RPHPA~WR~V~GlsVlYll~LvFLlFq~~~~AR~r~~~~~~e~Ni~~Gl~a~~~~Flv~s~l~~PdGpf~RPHPav 163 (760)
|||+|||||+||+|||+||+|+++|+|+||||++|+|
T Consensus 114 gpF~RPHPa~WR~vfg~SViYll~L~FlLFQ~~~d~r------------------------------------------- 150 (466)
T KOG2735|consen 114 GPFIRPHPALWRIVFGVSVIYLLFLQFLLFQTFDDIR------------------------------------------- 150 (466)
T ss_pred CCCCCCCchHHHHHHHhHHHHHHHHHHHHHhhhHHHH-------------------------------------------
Confidence 9999999999888888888777777777777666665
Q ss_pred hHHHHHHHHHHHHHHHHhhccchhhHHHHHhhhccCCCcccccccCCCCCchhhhhhhccccccCCCcccCCCccccccc
Q psy15746 164 WRMVFGLSIFYLLALLFLLFQNYETANLRILFFGNYPKKRTHIFEMPPSHPIVIIRLSFLGIMVAPSARIDMDKEYGVNC 243 (760)
Q Consensus 164 WR~V~GlsvlYll~LvFLLFQn~~~ar~~~~~~~~DP~L~~~i~~~p~~~p~~~~~~~~~G~~v~~~~~~~~eksYa~nC 243 (760)
+.++++||+|| +..++|||+||.||
T Consensus 151 -----------------------------~~l~wldPkl~--------------------------~~~~l~EkeYg~nC 175 (466)
T KOG2735|consen 151 -----------------------------QFLKWLDPKLG--------------------------GQIELPEKEYGVNC 175 (466)
T ss_pred -----------------------------hHheeeCcccC--------------------------CCcccchhhhcCcc
Confidence 24456999994 23568899999999
Q ss_pred ccCccccccccceehhhhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhHHhhh
Q psy15746 244 SDISLEKIYNHLDVFALGHFVGWAFKAVLIRHMGILWAMSVMWEFTEIAFAHLLPNFIECWWDALILDILLCNGIGIWVG 323 (760)
Q Consensus 244 ~~~t~eni~n~~DIFv~AHf~GW~~KaliiRd~~lcW~lSI~FE~~ElsfqHlLPNF~ECWWDhlILDVLlCN~lGI~lG 323 (760)
+++++|++++++|+|++|||+||++||++|||+++||++||+||++|++|+|+||||+||||||+|||||+|||+|||+|
T Consensus 176 ~~~spdri~sh~D~Fa~aHf~GW~mKalLIR~~~lcw~iSI~wEltE~~f~hlLPNFaECWWD~iILDVLiCNglGI~~G 255 (466)
T KOG2735|consen 176 SIYSPDRIWSHLDIFAFAHFLGWAMKALLIRHWVLCWVISIMWELTELTFRHLLPNFAECWWDSIILDVLICNGLGIWAG 255 (466)
T ss_pred ccCCHHHHhhhhhhhHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHHHHheecccchhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccceeeeeeeeecccCCcchhhhhhhcccCCCcceeeeeCCCCCCchhHHHHHHHHHHHHHhhhhhhhhhheeee
Q psy15746 324 LKLCKWFEMREYKWVSIKDIHSTSGKLKRAMLQFTPQSWTHVRWLDPTCTYMRFIGVCQMVLFWQLSELNTFFLKHIFEM 403 (760)
Q Consensus 324 m~~c~~Lemk~Y~W~g~k~i~s~~gK~kR~llQFTP~sW~~~~W~~~tss~~Rfl~v~~l~~~~ll~ELN~FFLK~vLwi 403 (760)
|++||+|+||+|+|.|+|+|||++||+||+++||||+||+++||. |++|++|+++|+.++++|+++|||+|||||++||
T Consensus 256 mk~c~~L~mrty~W~sik~i~t~~GK~KR~~lQFTPasW~~~~W~-p~ss~~R~~~V~~lviiwlltELNTFFlKhvf~i 334 (466)
T KOG2735|consen 256 MKTCRWLSMRTYHWESIKNIPTTRGKMKRAALQFTPASWSKFEWH-PASSLRRFAAVYTLVIIWLLTELNTFFLKHVFWI 334 (466)
T ss_pred hHHHhhhcccceeeeeeccCcccchhHHHHhhccCcccccccccc-cchHHHHHHHHHHHHHHHHHHHHHHHHHheeEec
Confidence 999999999999999999999999999999999999999999995 9999999999999999999999999999999999
Q ss_pred CCCCchhHhHHHHHHhhhhhhhhhhhccccCCCccccchhhHHHHHHHHHHHHHHhhhCcCccCcccchhhHHHHHHHHH
Q psy15746 404 PPSHPIVIIRLSFLGIMVAPSARQYYSFVTDTQCKRLGTQCWIYGAIQLTEALLCIKNGKLLFGRTQAVNILAWLSVMFL 483 (760)
Q Consensus 404 PpsH~lv~~RL~l~~l~~~pAvrEyY~yitdp~~kRlG~~~Wl~iai~~tE~lI~iKfg~~~F~~~~p~~iv~Wl~~~~l 483 (760)
||+||++++||++++++++|++
T Consensus 335 pp~Hpvv~~RlIli~~i~apti---------------------------------------------------------- 356 (466)
T KOG2735|consen 335 PPKHPVVLWRLILIALIAAPTI---------------------------------------------------------- 356 (466)
T ss_pred CCCCceeehhHHHHHhhccchH----------------------------------------------------------
Confidence 9999999999999999999988
Q ss_pred HHHHHhhhhhhheeeeeeEEeeccccceeeeeeeecccccccccchhhhHHHHHHHHHHHHHhchhhhhhhhhhHHHHHH
Q psy15746 484 LAVLCVYGCVLWHRYVSVMFFYCPYFDRQYYSFVTDTQCKRLGTQCWIYGAIQLTEALLCIKNGKLLFGRTQAVNILAWL 563 (760)
Q Consensus 484 is~~~~~~~~~~~~~~~i~~~~~p~~~rqyy~y~td~~ckr~gtqcwv~~ai~~~e~~~cik~g~~lf~~t~~~~i~~wl 563 (760)
||||+|+||++|||||+|||||+||+.+|+++|||||+++|+|||+.||++|+
T Consensus 357 ---------------------------Rqyy~y~tD~~~KrvG~qcWv~~aI~~~El~IciKfg~~~f~~t~~~~Ivlw~ 409 (466)
T KOG2735|consen 357 ---------------------------RQYYVYLTDKPCKRVGMQCWVFLAICALELLICIKFGSHMFIKTQINYIVLWL 409 (466)
T ss_pred ---------------------------HHHHHHccCchhhhcchhHHHHHHHHHHHhhhheeeCCceeeecchhHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhheeehhhhhc
Q psy15746 564 SVMFLLAVLCVYGCVLWHRYVS 585 (760)
Q Consensus 564 ~~~~~~~~~c~yg~v~~~~~Is 585 (760)
+++.+.++.|+|++|+|+++.+
T Consensus 410 l~~v~~t~~~v~~~v~~~~~~~ 431 (466)
T KOG2735|consen 410 LMGVIGTFTCVLLAVWWAERKG 431 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999773
No 2
>PLN02930 CDP-diacylglycerol-serine O-phosphatidyltransferase
Probab=100.00 E-value=8.8e-121 Score=961.75 Aligned_cols=311 Identities=38% Similarity=0.787 Sum_probs=298.3
Q ss_pred cchhhHhhHHHHHHHHHHHhhccCCCCCccCCCcchhHHHHHHHHHHHHHHHHhhccchhhHHHHHhhhccCCCcccccc
Q psy15746 128 ETDNIWAGLIAVIFFLLLISTLAFPNGPFTRPHPAVWRMVFGLSIFYLLALLFLLFQNYETANLRILFFGNYPKKRTHIF 207 (760)
Q Consensus 128 ~e~Ni~~Gl~a~~~~Flv~s~l~~PdGpf~RPHPavWR~V~GlsvlYll~LvFLLFQn~~~ar~~~~~~~~DP~L~~~i~ 207 (760)
.++|++||+.|++++|++||++|+|||||+|||||+||+|+|++|+|+++|+||||||+||||+.+. ++||+||+
T Consensus 34 ~~~n~~~Gv~a~i~~fl~~~~lq~pdg~f~RPHPa~WR~v~gl~vlYl~~LvFLLFq~~~d~R~~l~--~ldp~Lg~--- 108 (353)
T PLN02930 34 LVTSVKRGVWAMIAVFLAYCLLQAPSTVLIRPHPAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMK--FLHPDLGV--- 108 (353)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH--hcChhhCC---
Confidence 5789999999999999999999999999999999999999999999999999999999999997665 49999942
Q ss_pred cCCCCCchhhhhhhccccccCCCcccCCCcccccccccCccc-------ccccc-ceehhhhHhHHHHHHHHHHHhhHHH
Q psy15746 208 EMPPSHPIVIIRLSFLGIMVAPSARIDMDKEYGVNCSDISLE-------KIYNH-LDVFALGHFVGWAFKAVLIRHMGIL 279 (760)
Q Consensus 208 ~~p~~~p~~~~~~~~~G~~v~~~~~~~~eksYa~nC~~~t~e-------ni~n~-~DIFv~AHf~GW~~KaliiRd~~lc 279 (760)
+.|||+||+||+++|+| |++++ +|+|++||++||++||+++||+++|
T Consensus 109 -------------------------~lpE~~Y~~nC~~~tp~~p~~~~~ni~~~~~D~F~~aH~lGW~~KaliiRd~~l~ 163 (353)
T PLN02930 109 -------------------------ELPERSYGADCRIYTPEHPSSRFKNVYDTLFDEFVVAHILGWWGKAIMIRNQPLL 163 (353)
T ss_pred -------------------------CCcccccccCceecCCCCcchhHHHhhhcccceehHHHHHHHHHHHHHHhcHHHH
Confidence 34699999999988765 55666 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhhhhhhhHHhhhhhhhcccceeeeeeeeecccCCcchhhhhhhcccCC
Q psy15746 280 WAMSVMWEFTEIAFAHLLPNFIECWWDALILDILLCNGIGIWVGLKLCKWFEMREYKWVSIKDIHSTSGKLKRAMLQFTP 359 (760)
Q Consensus 280 W~lSI~FE~~ElsfqHlLPNF~ECWWDhlILDVLlCN~lGI~lGm~~c~~Lemk~Y~W~g~k~i~s~~gK~kR~llQFTP 359 (760)
|++||+||++|+||||+||||+||||||+|||||+||++||++||++||+||||+|||.|++++++.+||+||++.||||
T Consensus 164 w~~SI~FEl~Elsf~H~LPNF~ECWWDhiiLDVL~CN~lGI~lGm~~~k~l~~k~Y~W~g~~~~~~~~gk~kR~l~qFTP 243 (353)
T PLN02930 164 WVLSIGFELMELTFRHMLPNFNECWWDSIVLDVLICNWFGIWAGMHTVKYFDGKTYEWVGISRQPNIIGKVKRTLGQFTP 243 (353)
T ss_pred HHHHHHHHHHHHHHHHHCCchHHHHhHHHHHHHHHhhHHHHHHHHHHHHHcCCccccccccCCCCcccchhhhHHhccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceeeeeCCCCCCchhHHHHHHHHHHHHHhhhhhhhhhheeeeCCCCchhHhHHHHHHhhhhhhhhhhhccccCCC-cc
Q psy15746 360 QSWTHVRWLDPTCTYMRFIGVCQMVLFWQLSELNTFFLKHIFEMPPSHPIVIIRLSFLGIMVAPSARQYYSFVTDTQ-CK 438 (760)
Q Consensus 360 ~sW~~~~W~~~tss~~Rfl~v~~l~~~~ll~ELN~FFLK~vLwiPpsH~lv~~RL~l~~l~~~pAvrEyY~yitdp~-~k 438 (760)
+||++|+| ++++|++|++++++++++++++|||+||||++|||||+||++.+|+++|+++|+||+||||+|++||+ +|
T Consensus 244 ~sw~~~~W-~~~~s~~rf~~v~~l~~~~~l~eLN~FFLK~~L~ipp~h~l~~~Rl~l~~~i~~~a~rEyY~yitd~~~~k 322 (353)
T PLN02930 244 AQWDKDEW-HPLQGPWRFLQVLFLCVVFLTVELNTFFLKFCLWIPPRNPLIVYRLILWWLIAIPTIREYNSFLQDRKPVK 322 (353)
T ss_pred cccccccc-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 99999999 78999999999999999999999999999999999999999999999999999999999999999999 68
Q ss_pred ccchhhHHHHHHHHHHHHHHhhhCcCccCcc
Q psy15746 439 RLGTQCWIYGAIQLTEALLCIKNGKLLFGRT 469 (760)
Q Consensus 439 RlG~~~Wl~iai~~tE~lI~iKfg~~~F~~~ 469 (760)
|+|+|||+.++|+++|+++|+|||+++|++|
T Consensus 323 rlG~~~Wl~~ai~~~E~li~iK~g~~lf~~p 353 (353)
T PLN02930 323 KLGAFCWLSLAICIVELLICIKFGHGLFPKP 353 (353)
T ss_pred ccchhhHHHHHHHHHHHHHHHHhcccccCCC
Confidence 9999999999999999999999999999876
No 3
>PF03034 PSS: Phosphatidyl serine synthase; InterPro: IPR004277 Phosphatidyl serine synthase is also known as serine exchange enzyme (2.7.8 from EC). This family represents eukaryotic PSS I and II, membrane bound proteins that catalyse the replacement of the head group of a phospholipid (phosphotidylcholine or phosphotidylethanolamine) by L-serine.; GO: 0006659 phosphatidylserine biosynthetic process
Probab=100.00 E-value=6.1e-107 Score=837.43 Aligned_cols=274 Identities=50% Similarity=0.997 Sum_probs=265.4
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhccchhhHHHHHhhhccCCCcccccccCCCCCchhhhhhhccccccCCCcccCCCcc
Q psy15746 159 PHPAVWRMVFGLSIFYLLALLFLLFQNYETANLRILFFGNYPKKRTHIFEMPPSHPIVIIRLSFLGIMVAPSARIDMDKE 238 (760)
Q Consensus 159 PHPavWR~V~GlsvlYll~LvFLLFQn~~~ar~~~~~~~~DP~L~~~i~~~p~~~p~~~~~~~~~G~~v~~~~~~~~eks 238 (760)
||||+||+|||+||+|+++|+||||||+||||+.+. ++||+||+ +.|||+
T Consensus 1 PHPa~WR~v~g~~v~Y~~~L~fllfq~~~~~r~~l~--~~dp~Lg~----------------------------~~~e~~ 50 (280)
T PF03034_consen 1 PHPAFWRIVFGLSVLYLLFLVFLLFQNRDDARQILK--YLDPSLGK----------------------------PLPEKS 50 (280)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH--hcCcccCC----------------------------CCCCcC
Confidence 999999999999999999999999999999997664 59999942 356899
Q ss_pred cccccccCcccc------ccccceehhhhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHh
Q psy15746 239 YGVNCSDISLEK------IYNHLDVFALGHFVGWAFKAVLIRHMGILWAMSVMWEFTEIAFAHLLPNFIECWWDALILDI 312 (760)
Q Consensus 239 Ya~nC~~~t~en------i~n~~DIFv~AHf~GW~~KaliiRd~~lcW~lSI~FE~~ElsfqHlLPNF~ECWWDhlILDV 312 (760)
||+||+++++|+ +++++|+|++||++||++||+++||+++||++||+||++|+||||+||||+||||||+||||
T Consensus 51 Ya~nC~~~~~~~p~~~~ni~~~~D~f~~aH~~GW~~Kali~Rd~~l~w~~Si~fE~~Elsf~h~LPnF~ECWWD~~iLDv 130 (280)
T PF03034_consen 51 YAENCRIYTPENPESPHNIWDTFDIFVLAHFLGWFGKALILRDWWLCWILSIAFELLELSFQHLLPNFNECWWDHWILDV 130 (280)
T ss_pred ccCCCeeCCCCCCCcchhhHhhcchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHH
Confidence 999999999986 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHhhhhhhhcccceeeeeeeeecccCCcchhhhhhhcccCCCcceeeeeCCCCCCchhHHHHHHHHHHHHHhhh
Q psy15746 313 LLCNGIGIWVGLKLCKWFEMREYKWVSIKDIHSTSGKLKRAMLQFTPQSWTHVRWLDPTCTYMRFIGVCQMVLFWQLSEL 392 (760)
Q Consensus 313 LlCN~lGI~lGm~~c~~Lemk~Y~W~g~k~i~s~~gK~kR~llQFTP~sW~~~~W~~~tss~~Rfl~v~~l~~~~ll~EL 392 (760)
|+||++||++||++||+||||+|||+|++++|+++||+||+++||||+||++++|. +++|++|++++++++++++++||
T Consensus 131 l~CN~~Gi~~Gm~~~~~l~~k~Y~W~g~~~~~~~~gk~kr~~~QFtP~sw~~~~W~-~~~s~~rf~~v~~l~~~~ll~EL 209 (280)
T PF03034_consen 131 LICNGLGIWLGMKTCRYLEMKEYDWRGIRDIPTYRGKLKRALLQFTPYSWTKYEWK-PFSSPKRFLQVLFLLIVFLLSEL 209 (280)
T ss_pred HHhhHHHHHHHHHHHHHhcCCCccccccccCCchhHHHHHHHHccCCCcCcccccC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999995 56779999999999999999999
Q ss_pred hhhhhhheeeeCCCCchhHhHHHHHHhhhhhhhhhhhccccCCCccccchhhHHHHHHHHHHHHHHhhhCc
Q psy15746 393 NTFFLKHIFEMPPSHPIVIIRLSFLGIMVAPSARQYYSFVTDTQCKRLGTQCWIYGAIQLTEALLCIKNGK 463 (760)
Q Consensus 393 N~FFLK~vLwiPpsH~lv~~RL~l~~l~~~pAvrEyY~yitdp~~kRlG~~~Wl~iai~~tE~lI~iKfg~ 463 (760)
|+|||||+|||||+||+|++|+++++++|+||+||||+|++||++||+|+|||+.+||+++|+++|+|||+
T Consensus 210 N~FFLK~vLwIPp~H~Lv~~RL~l~~li~~pAiREyY~yitd~~~krlG~~~Wl~~ai~~~E~LI~iKfg~ 280 (280)
T PF03034_consen 210 NTFFLKHVLWIPPSHPLVIYRLLLWFLIGAPAIREYYEYITDPNCKRLGQQAWLLIAILFTELLICIKFGR 280 (280)
T ss_pred HHHHHHhheecCCCCccHHHHHHHHHHHHHHHHHHHHHHccCCccccchhHHHHHHHHHHHHHHHhhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999996
No 4
>KOG2735|consensus
Probab=100.00 E-value=6.3e-69 Score=568.74 Aligned_cols=380 Identities=28% Similarity=0.476 Sum_probs=291.9
Q ss_pred CCccCCchhHHHHHHHHHHHHHHHHHHHHHhccccceecCCCCCcchhhHhhHHHHHHHHHHHhhccCCCCCccCCCcch
Q psy15746 84 GPFTRPHPAVWRMVFGLSIFYLLALLFLLFQNYETAICRNEDVSETDNIWAGLIAVIFFLLLISTLAFPNGPFTRPHPAV 163 (760)
Q Consensus 84 GpF~RPHPA~WR~V~GlsVlYll~LvFLlFq~~~~AR~r~~~~~~e~Ni~~Gl~a~~~~Flv~s~l~~PdGpf~RPHPav 163 (760)
.-|.|||..- +++++++.++ +. |.++++++++|.|++||++|++++||++|++|||||||+|||||+
T Consensus 57 dffykphTiT---lL~i~~~~l~---y~-------a~~~~~~~~t~~N~~rGil~~i~~FL~~svlafpngpF~RPHPa~ 123 (466)
T KOG2735|consen 57 DFFYKPHTIT---LLLILICFLI---YK-------AFTGDTENTTETNVKRGILAMIAVFLIISVLAFPNGPFIRPHPAL 123 (466)
T ss_pred hheecCceeh---HHHHHHHHHH---HH-------HHhCCCCcchHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCchH
Confidence 4589999984 3333333222 11 235677888899999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhccchhhHHHHHhhhccCCCcccccccCCCCCchhhhhhhccccccCCCcccCCCccccccc
Q psy15746 164 WRMVFGLSIFYLLALLFLLFQNYETANLRILFFGNYPKKRTHIFEMPPSHPIVIIRLSFLGIMVAPSARIDMDKEYGVNC 243 (760)
Q Consensus 164 WR~V~GlsvlYll~LvFLLFQn~~~ar~~~~~~~~DP~L~~~i~~~p~~~p~~~~~~~~~G~~v~~~~~~~~eksYa~nC 243 (760)
||+|||+||+|+++|+|+|||| .+++|+.+.++ ||+--|+.
T Consensus 124 WR~vfg~SViYll~L~FlLFQ~-------------~~d~r~~l~wl------------------------dPkl~~~~-- 164 (466)
T KOG2735|consen 124 WRIVFGVSVIYLLFLQFLLFQT-------------FDDIRQFLKWL------------------------DPKLGGQI-- 164 (466)
T ss_pred HHHHHHhHHHHHHHHHHHHHhh-------------hHHHHhHheee------------------------CcccCCCc--
Confidence 9999999999999999999999 44677766653 44433333
Q ss_pred ccCccccccccceeh---hhhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhccchhHHH------------HHHH
Q psy15746 244 SDISLEKIYNHLDVF---ALGHFVGWAFKAVLIRHMGILWAMSVMWEFTEIAFAHLLPNFIECW------------WDAL 308 (760)
Q Consensus 244 ~~~t~eni~n~~DIF---v~AHf~GW~~KaliiRd~~lcW~lSI~FE~~ElsfqHlLPNF~ECW------------WDhl 308 (760)
+..+.|+..||.|+- +.+|++++++.++. +|+++.. +++|-.-|| ..|+
T Consensus 165 ~l~EkeYg~nC~~~spdri~sh~D~Fa~aHf~------GW~mKal----------LIR~~~lcw~iSI~wEltE~~f~hl 228 (466)
T KOG2735|consen 165 ELPEKEYGVNCSIYSPDRIWSHLDIFAFAHFL------GWAMKAL----------LIRHWVLCWVISIMWELTELTFRHL 228 (466)
T ss_pred ccchhhhcCccccCCHHHHhhhhhhhHHHHHH------HHHHHHH----------HHhcchHHHHHHHHHHHHHHHHHHH
Confidence 333456777898877 99999999999887 8888843 566666666 5688
Q ss_pred HHHhhhhhhhHHhhhhhhhcccceeeeeeeeecccCCcchhhhhhhcccCCCcceeeeeCCCCCCchhHHHHHHHHHHHH
Q psy15746 309 ILDILLCNGIGIWVGLKLCKWFEMREYKWVSIKDIHSTSGKLKRAMLQFTPQSWTHVRWLDPTCTYMRFIGVCQMVLFWQ 388 (760)
Q Consensus 309 ILDVLlCN~lGI~lGm~~c~~Lemk~Y~W~g~k~i~s~~gK~kR~llQFTP~sW~~~~W~~~tss~~Rfl~v~~l~~~~l 388 (760)
+.++..|+|..++++.++||++|+ |.|++.++ .++++.|.|++++-...+.+..+.++.++.+..|.
T Consensus 229 LPNFaECWWD~iILDVLiCNglGI----~~Gmk~c~---------~L~mrty~W~sik~i~t~~GK~KR~~lQFTPasW~ 295 (466)
T KOG2735|consen 229 LPNFAECWWDSIILDVLICNGLGI----WAGMKTCR---------WLSMRTYHWESIKNIPTTRGKMKRAALQFTPASWS 295 (466)
T ss_pred CccHHHHHHHHHHHHheecccchh----hhHhHHHh---------hhcccceeeeeeccCcccchhHHHHhhccCccccc
Confidence 889999999999999999999999 99998775 77888999999999877776666666665544443
Q ss_pred HhhhhhhhhhheeeeCCCCchhHhHHHHHHhhhhhhhhhhhccccCCCccccchhhHHHHHHHHHHHHHHhhhCcCccCc
Q psy15746 389 LSELNTFFLKHIFEMPPSHPIVIIRLSFLGIMVAPSARQYYSFVTDTQCKRLGTQCWIYGAIQLTEALLCIKNGKLLFGR 468 (760)
Q Consensus 389 l~ELN~FFLK~vLwiPpsH~lv~~RL~l~~l~~~pAvrEyY~yitdp~~kRlG~~~Wl~iai~~tE~lI~iKfg~~~F~~ 468 (760)
-.|+ -|.+ ..+|.-+-+-+++.++++|+.. .|-+..|.-
T Consensus 296 ~~~W----------~p~s-----------------------------s~~R~~~V~~lviiwlltELNT--FFlKhvf~i 334 (466)
T KOG2735|consen 296 KFEW----------HPAS-----------------------------SLRRFAAVYTLVIIWLLTELNT--FFLKHVFWI 334 (466)
T ss_pred cccc----------ccch-----------------------------HHHHHHHHHHHHHHHHHHHHHH--HHHheeEec
Confidence 2221 1111 1246666677788888888443 222222221
Q ss_pred ccchhhHHHHHHHHHHHHHHhhhhhhheeeeeeEEeeccccceeeeeeeecccccccccchhhhHHHHHHHHHHHHHhch
Q psy15746 469 TQAVNILAWLSVMFLLAVLCVYGCVLWHRYVSVMFFYCPYFDRQYYSFVTDTQCKRLGTQCWIYGAIQLTEALLCIKNGK 548 (760)
Q Consensus 469 ~~p~~iv~Wl~~~~lis~~~~~~~~~~~~~~~i~~~~~p~~~rqyy~y~td~~ckr~gtqcwv~~ai~~~e~~~cik~g~ 548 (760)
| .
T Consensus 335 p--------------------------------------p---------------------------------------- 336 (466)
T KOG2735|consen 335 P--------------------------------------P---------------------------------------- 336 (466)
T ss_pred C--------------------------------------C----------------------------------------
Confidence 1 1
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHhhheeehhhhhccccccceeeeecchhhhhcCcchhhhHHHHHHHHHHHHhcCCc
Q psy15746 549 LLFGRTQAVNILAWLSVMFLLAVLCVYGCVLWHRYVSILKYRQYYSFVTDTQCKRLGTQCWIYGAIQLTEALLCIKNGKL 628 (760)
Q Consensus 549 ~lf~~t~~~~i~~wl~~~~~~~~~c~yg~v~~~~~Isap~~~q~~~~~td~~~~r~g~q~wv~~~i~~le~~~cik~g~~ 628 (760)
.+.++|....+ + | .|+|||.||||+|+|||+|||||||||||+|||++||+||||||++
T Consensus 337 --------~Hpvv~~RlIl-i------~------~i~aptiRqyy~y~tD~~~KrvG~qcWv~~aI~~~El~IciKfg~~ 395 (466)
T KOG2735|consen 337 --------KHPVVLWRLIL-I------A------LIAAPTIRQYYVYLTDKPCKRVGMQCWVFLAICALELLICIKFGSH 395 (466)
T ss_pred --------CCceeehhHHH-H------H------hhccchHHHHHHHccCchhhhcchhHHHHHHHHHHHhhhheeeCCc
Confidence 01111111111 1 1 2569999999999999999999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccceeeeeccC--CCCCcccccc
Q psy15746 629 LFGRTQAVNILAWLSVMFLLAVLCVYGCVLWHRYVSEILETVVTKK--PNRPQRRNED 684 (760)
Q Consensus 629 ~f~~~~~~~~~~w~~~~~~~t~~~~~~~~w~~~~~~~~~~~~~~~~--~~~~~~~~~~ 684 (760)
||+|||..+|++|+++.++||+.|+|.++||+|+.|++.|.-.++| -++++.++|.
T Consensus 396 ~f~~t~~~~Ivlw~l~~v~~t~~~v~~~v~~~~~~~t~~~~~~~~~~~~~~~~~s~~~ 453 (466)
T KOG2735|consen 396 MFIKTQINYIVLWLLMGVIGTFTCVLLAVWWAERKGTTPRAKEPGKASLLYLQSSHRN 453 (466)
T ss_pred eeeecchhHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccccChhhcccccccCccc
Confidence 9999999999999999999999999999999999999999887765 3567776654
No 5
>PF03034 PSS: Phosphatidyl serine synthase; InterPro: IPR004277 Phosphatidyl serine synthase is also known as serine exchange enzyme (2.7.8 from EC). This family represents eukaryotic PSS I and II, membrane bound proteins that catalyse the replacement of the head group of a phospholipid (phosphotidylcholine or phosphotidylethanolamine) by L-serine.; GO: 0006659 phosphatidylserine biosynthetic process
Probab=99.89 E-value=1.1e-24 Score=226.67 Aligned_cols=210 Identities=22% Similarity=0.340 Sum_probs=158.3
Q ss_pred ccccccceeh---------hhhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhccchhHHH------------HHH
Q psy15746 249 EKIYNHLDVF---------ALGHFVGWAFKAVLIRHMGILWAMSVMWEFTEIAFAHLLPNFIECW------------WDA 307 (760)
Q Consensus 249 eni~n~~DIF---------v~AHf~GW~~KaliiRd~~lcW~lSI~FE~~ElsfqHlLPNF~ECW------------WDh 307 (760)
++.-||.+.. +..|++.|+..+++ +|..+.. +++|+.-|| +.|
T Consensus 50 ~Ya~nC~~~~~~~p~~~~ni~~~~D~f~~aH~~------GW~~Kal----------i~Rd~~l~w~~Si~fE~~Elsf~h 113 (280)
T PF03034_consen 50 SYAENCRIYTPENPESPHNIWDTFDIFVLAHFL------GWFGKAL----------ILRDWWLCWILSIAFELLELSFQH 113 (280)
T ss_pred CccCCCeeCCCCCCCcchhhHhhcchhHHHHHH------HHHHHHH----------HHhhHHHHHHHHHHHHHHHHHHHH
Confidence 4455675554 78899999999887 8888854 888888888 678
Q ss_pred HHHHhhhhhhhHHhhhhhhhcccceeeeeeeeecccCCcchhhhhhhcccCCCcceeeeeCCCCCCchhHHHHHHHHHHH
Q psy15746 308 LILDILLCNGIGIWVGLKLCKWFEMREYKWVSIKDIHSTSGKLKRAMLQFTPQSWTHVRWLDPTCTYMRFIGVCQMVLFW 387 (760)
Q Consensus 308 lILDVLlCN~lGI~lGm~~c~~Lemk~Y~W~g~k~i~s~~gK~kR~llQFTP~sW~~~~W~~~tss~~Rfl~v~~l~~~~ 387 (760)
++.++-.|+|+-+.+++++||.+|| |.|++-++ .+++++|+|.+.+-.+..++..|.+..++.
T Consensus 114 ~LPnF~ECWWD~~iLDvl~CN~~Gi----~~Gm~~~~---------~l~~k~Y~W~g~~~~~~~~gk~kr~~~QFt---- 176 (280)
T PF03034_consen 114 LLPNFNECWWDHWILDVLICNGLGI----WLGMKTCR---------YLEMKEYDWRGIRDIPTYRGKLKRALLQFT---- 176 (280)
T ss_pred hCccHHHHHHHHHHHHHHHhhHHHH----HHHHHHHH---------HhcCCCccccccccCCchhHHHHHHHHccC----
Confidence 8899999999999999999999999 99998664 678899999999886554444443333322
Q ss_pred HHhhhhhhhhhheeeeCCCCchhHhHHHHHHhhhhhhhhhhhccccCCCccccchhhHHHHHHHHHHHHHHhhhCcCccC
Q psy15746 388 QLSELNTFFLKHIFEMPPSHPIVIIRLSFLGIMVAPSARQYYSFVTDTQCKRLGTQCWIYGAIQLTEALLCIKNGKLLFG 467 (760)
Q Consensus 388 ll~ELN~FFLK~vLwiPpsH~lv~~RL~l~~l~~~pAvrEyY~yitdp~~kRlG~~~Wl~iai~~tE~lI~iKfg~~~F~ 467 (760)
|.+- +-|+.-...+.+|..+-..+.+.++++|+.. -|-|..+.
T Consensus 177 ----------------P~sw-------------------~~~~W~~~~s~~rf~~v~~l~~~~ll~ELN~--FFLK~vLw 219 (280)
T PF03034_consen 177 ----------------PYSW-------------------TKYEWKPFSSPKRFLQVLFLLIVFLLSELNT--FFLKHVLW 219 (280)
T ss_pred ----------------CCcC-------------------cccccCCCCCHHHHHHHHHHHHHHHHHHHHH--HHHHhhee
Confidence 2222 2233322233689999999999999999555 44444443
Q ss_pred cccchhhHHHHHHHHHHHHHHhhhhhhheeeeeeEEeeccccceeeeeeeecccccccccchhhhHHHHHHHHHHHHHhc
Q psy15746 468 RTQAVNILAWLSVMFLLAVLCVYGCVLWHRYVSVMFFYCPYFDRQYYSFVTDTQCKRLGTQCWIYGAIQLTEALLCIKNG 547 (760)
Q Consensus 468 ~~~p~~iv~Wl~~~~lis~~~~~~~~~~~~~~~i~~~~~p~~~rqyy~y~td~~ckr~gtqcwv~~ai~~~e~~~cik~g 547 (760)
-| ..+.+...|.+.++++-+|+. ||||.|+||++|||+|+|||+++||+++|+++|+|||
T Consensus 220 IP-------------------p~H~Lv~~RL~l~~li~~pAi-REyY~yitd~~~krlG~~~Wl~~ai~~~E~LI~iKfg 279 (280)
T PF03034_consen 220 IP-------------------PSHPLVIYRLLLWFLIGAPAI-REYYEYITDPNCKRLGQQAWLLIAILFTELLICIKFG 279 (280)
T ss_pred cC-------------------CCCccHHHHHHHHHHHHHHHH-HHHHHHccCCccccchhHHHHHHHHHHHHHHHhhccC
Confidence 33 234444445555555667774 9999999999999999999999999999999999999
Q ss_pred h
Q psy15746 548 K 548 (760)
Q Consensus 548 ~ 548 (760)
+
T Consensus 280 ~ 280 (280)
T PF03034_consen 280 R 280 (280)
T ss_pred C
Confidence 6
No 6
>PLN02930 CDP-diacylglycerol-serine O-phosphatidyltransferase
Probab=99.85 E-value=9e-23 Score=217.64 Aligned_cols=200 Identities=20% Similarity=0.324 Sum_probs=147.5
Q ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhccchhHHH------------HHHHHHHhhhhhhhHHhhhhhhhccc
Q psy15746 263 FVGWAFKAVLIRHMGILWAMSVMWEFTEIAFAHLLPNFIECW------------WDALILDILLCNGIGIWVGLKLCKWF 330 (760)
Q Consensus 263 f~GW~~KaliiRd~~lcW~lSI~FE~~ElsfqHlLPNF~ECW------------WDhlILDVLlCN~lGI~lGm~~c~~L 330 (760)
++.|...+++ +|..+.. +++|+.-|| +.|++.++-.|+|+-+.++.++||.+
T Consensus 139 ~D~F~~aH~l------GW~~Kal----------iiRd~~l~w~~SI~FEl~Elsf~H~LPNF~ECWWDhiiLDVL~CN~l 202 (353)
T PLN02930 139 FDEFVVAHIL------GWWGKAI----------MIRNQPLLWVLSIGFELMELTFRHMLPNFNECWWDSIVLDVLICNWF 202 (353)
T ss_pred cceehHHHHH------HHHHHHH----------HHhcHHHHHHHHHHHHHHHHHHHHHCCchHHHHhHHHHHHHHHhhHH
Confidence 6777777666 7777744 777777777 77999999999999999999999999
Q ss_pred ceeeeeeeeecccCCcchhhhhhhcccCCCcceeeeeCCCCC-CchhHHHHHHHHHHHHHhhhhhhhhhheeeeCCCCch
Q psy15746 331 EMREYKWVSIKDIHSTSGKLKRAMLQFTPQSWTHVRWLDPTC-TYMRFIGVCQMVLFWQLSELNTFFLKHIFEMPPSHPI 409 (760)
Q Consensus 331 emk~Y~W~g~k~i~s~~gK~kR~llQFTP~sW~~~~W~~~ts-s~~Rfl~v~~l~~~~ll~ELN~FFLK~vLwiPpsH~l 409 (760)
|| |.|++-++ .+++.+|+|.+.+-.+..+ +.||.+. ++ -|.|
T Consensus 203 GI----~lGm~~~k---------~l~~k~Y~W~g~~~~~~~~gk~kR~l~-qF--------------------TP~s--- 245 (353)
T PLN02930 203 GI----WAGMHTVK---------YFDGKTYEWVGISRQPNIIGKVKRTLG-QF--------------------TPAQ--- 245 (353)
T ss_pred HH----HHHHHHHH---------HcCCccccccccCCCCcccchhhhHHh-cc--------------------Cccc---
Confidence 99 99998764 6788899998864433222 3444322 11 1222
Q ss_pred hHhHHHHHHhhhhhhhhhhhccccCCCccccchhhHHHHHHHHHHHHHHhhhCcCccCcccchhhHHHHHHHHHHHHHHh
Q psy15746 410 VIIRLSFLGIMVAPSARQYYSFVTDTQCKRLGTQCWIYGAIQLTEALLCIKNGKLLFGRTQAVNILAWLSVMFLLAVLCV 489 (760)
Q Consensus 410 v~~RL~l~~l~~~pAvrEyY~yitdp~~kRlG~~~Wl~iai~~tE~lI~iKfg~~~F~~~~p~~iv~Wl~~~~lis~~~~ 489 (760)
=+.|+.-...+.+|..+...+.+.++++|+.. -|-+..+.- ..
T Consensus 246 ----------------w~~~~W~~~~s~~rf~~v~~l~~~~~l~eLN~--FFLK~~L~i-------------------pp 288 (353)
T PLN02930 246 ----------------WDKDEWHPLQGPWRFLQVLFLCVVFLTVELNT--FFLKFCLWI-------------------PP 288 (353)
T ss_pred ----------------ccccccCCCCCHHHHHHHHHHHHHHHHHHHHH--HHHHHHhcC-------------------CC
Confidence 25566633334679999999999999999554 333443332 33
Q ss_pred hhhhhheeeeeeEEeeccccceeeeeeeeccc-ccccccchhhhHHHHHHHHHHHHHhchhhhhh
Q psy15746 490 YGCVLWHRYVSVMFFYCPYFDRQYYSFVTDTQ-CKRLGTQCWIYGAIQLTEALLCIKNGKLLFGR 553 (760)
Q Consensus 490 ~~~~~~~~~~~i~~~~~p~~~rqyy~y~td~~-ckr~gtqcwv~~ai~~~e~~~cik~g~~lf~~ 553 (760)
.+.+...|.+.++++-+|+ +||||.|+||++ |||+|+|||+.+||+++|+++|+|||+++|.+
T Consensus 289 ~h~l~~~Rl~l~~~i~~~a-~rEyY~yitd~~~~krlG~~~Wl~~ai~~~E~li~iK~g~~lf~~ 352 (353)
T PLN02930 289 RNPLIVYRLILWWLIAIPT-IREYNSFLQDRKPVKKLGAFCWLSLAICIVELLICIKFGHGLFPK 352 (353)
T ss_pred CCchHHHHHHHHHHHHHHH-HHHHHHHhcCCccccccchhhHHHHHHHHHHHHHHHHhcccccCC
Confidence 3444444555555566677 499999999999 79999999999999999999999999999976
No 7
>PF07331 TctB: Tripartite tricarboxylate transporter TctB family; InterPro: IPR009936 This entry contains bacterial proteins of around 150 residues in length, which have 4 transmembrane domains. Some of the sequences in the entry are annotated as the TctB subunit of the tripartite tricarboxylate transport(TTT) family. However there is no direct evidence to support this annotation as characterised members of this family are not associated with the entry.
Probab=54.36 E-value=1.1e+02 Score=28.75 Aligned_cols=42 Identities=19% Similarity=0.440 Sum_probs=28.6
Q ss_pred chhhhHH-HHHHHHhhhhhcccCCCCccCCchhHHHHHHHHHH
Q psy15746 61 NIWAGLI-AVIFFLLLISTLAFPNGPFTRPHPAVWRMVFGLSI 102 (760)
Q Consensus 61 Ni~rGv~-a~i~~FLv~s~l~fPdGpF~RPHPA~WR~V~GlsV 102 (760)
|..-|+. .++..++.+...+.|.++...|.|.+|=.+.+...
T Consensus 3 d~i~~~~~~~~~~~~~~~a~~~~~~~~~~~gp~~fP~~l~~~l 45 (141)
T PF07331_consen 3 DLIIGLVFLAFGAVFLYQAFQIPSFPSGSPGPGFFPRLLGILL 45 (141)
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCccccCCCCChHHHHHHHHHH
Confidence 4444544 44445666666888888888999999987766543
No 8
>PF06664 MIG-14_Wnt-bd: Wnt-binding factor required for Wnt secretion
Probab=46.60 E-value=2.2e+02 Score=30.54 Aligned_cols=75 Identities=21% Similarity=0.300 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhccccceecCCCCCcchhhH-hhHHHHHHHHHHHhhccCC----------CCCccCCCcchhHHHHHHHH
Q psy15746 104 YLLALLFLLFQNYETAICRNEDVSETDNIW-AGLIAVIFFLLLISTLAFP----------NGPFTRPHPAVWRMVFGLSI 172 (760)
Q Consensus 104 Yll~LvFLlFq~~~~AR~r~~~~~~e~Ni~-~Gl~a~~~~Flv~s~l~~P----------dGpf~RPHPavWR~V~Glsv 172 (760)
|++.++++.++...+.|.+. .. .+.| -++...+.+.+....+... +..-..+..+..=...|+-=
T Consensus 208 Y~l~ll~li~rs~~~i~~~~--~~--~R~kfl~~~t~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssa~f~~~~gl~N 283 (298)
T PF06664_consen 208 YFLYLLFLIIRSFSEIRNKR--YF--LRFKFLTLFTLICAAVTVIGLILGFGSEGDNFWSEFSPFYSSSAFFLGFYGLWN 283 (298)
T ss_pred HHHHHHHHHHHHHHHhcccc--HH--HHHHHHHHHHHHHHHHHHHHHHHhhcccccchhhhcccccccHHHHHHHHHHHH
Confidence 88888888888888887111 00 0111 1222211111111111111 11223445788888899999
Q ss_pred HHHHHHHHhh
Q psy15746 173 FYLLALLFLL 182 (760)
Q Consensus 173 lYll~LvFLL 182 (760)
+|...|.++-
T Consensus 284 ~Yv~~l~~ly 293 (298)
T PF06664_consen 284 FYVYTLAYLY 293 (298)
T ss_pred HHHHHHHHHc
Confidence 9998888763
No 9
>PF11457 DUF3021: Protein of unknown function (DUF3021); InterPro: IPR021560 This is a bacterial family of uncharacterised proteins.
Probab=35.24 E-value=3.9e+02 Score=25.15 Aligned_cols=116 Identities=18% Similarity=0.183 Sum_probs=61.0
Q ss_pred hhHHHHHHHHhhhhhcccCCC----CccCCchhHHHHHHHHHHHHHHHHHHHHHhccccceecCCCCCcchhhHhhHHHH
Q psy15746 64 AGLIAVIFFLLLISTLAFPNG----PFTRPHPAVWRMVFGLSIFYLLALLFLLFQNYETAICRNEDVSETDNIWAGLIAV 139 (760)
Q Consensus 64 rGv~a~i~~FLv~s~l~fPdG----pF~RPHPA~WR~V~GlsVlYll~LvFLlFq~~~~AR~r~~~~~~e~Ni~~Gl~a~ 139 (760)
.|+.-+.+.+++++.+..+++ |... +.++..+.++.+--...+.-++|++.+ -|. .++-+.--
T Consensus 13 iGi~ig~~i~li~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ig~~~gl~s~if~~e~--------~s~---~~~~iiHf 79 (136)
T PF11457_consen 13 IGIGIGSFISLIISLFYGQGFYPSFPISV--SSILSVLVAVLIGAVFGLASLIFEIER--------WSL---LKQTIIHF 79 (136)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcCCccH--HHHHHHHHHHHHHHHHHHHHHHHcccc--------hhH---HHHHHHHH
Confidence 444445555566665555543 2222 345554422122334445556665521 121 33334444
Q ss_pred HHHHHHHhhccCCCCCccCCCcchhHHHHHHHHHHHHHHHHhhccchhhHHHH
Q psy15746 140 IFFLLLISTLAFPNGPFTRPHPAVWRMVFGLSIFYLLALLFLLFQNYETANLR 192 (760)
Q Consensus 140 ~~~Flv~s~l~~PdGpf~RPHPavWR~V~GlsvlYll~LvFLLFQn~~~ar~~ 192 (760)
+..++.+..+..-+|=|..=-+.++-......++|++.-...-.|+..|+|+.
T Consensus 80 ~~~~~~~~~~~~~~gW~~~~~~~~~~~~~~fi~IYliIw~~~y~~~k~~i~ki 132 (136)
T PF11457_consen 80 IITYAIFLILAYLLGWFPLSVISLLIFILIFIIIYLIIWLIFYLYWKKDIKKI 132 (136)
T ss_pred HHHHHHHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444334433222126666666777999999999999999999874
No 10
>PF10277 Frag1: Frag1/DRAM/Sfk1 family; InterPro: IPR019402 This entry includes Frag1, DRAM and Sfk1 proteins. Frag1 (FGF receptor activating protein 1) is a protein that is conserved from fungi to humans. There are four potential iso-prenylation sites throughout the peptide, CILW (x2), CIIW and CIGL. Frag1 is a membrane-spanning protein that is ubiquitously expressed in adult tissues suggesting an important cellular function []. DRAM is a family of proteins conserved from nematodes to humans with six hydrophobic transmembrane regions and an endoplasmic reticulum signal peptide. It is a lysosomal protein that induces macro-autophagy as an effector of p53-mediated death, where p53 is the tumour-suppressor gene that is frequently mutated in cancer. Expression of DRAM is stress-induced []. This region is also part of a family of small plasma membrane proteins, referred to as Sfk1, that may act together with or upstream of Stt4p to generate normal levels of the essential phospholipid PI4P, thus allowing proper localisation of Stt4p to the actin cytoskeleton [, ].
Probab=34.34 E-value=2.8e+02 Score=27.28 Aligned_cols=94 Identities=18% Similarity=0.260 Sum_probs=52.5
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHhccccceecCCCCCcchhhHhhHHHHHHHHHHHhhccCCCCCccCCCcchhHH
Q psy15746 87 TRPHPAVWRMVFGLSIFYLLALLFLLFQNYETAICRNEDVSETDNIWAGLIAVIFFLLLISTLAFPNGPFTRPHPAVWRM 166 (760)
Q Consensus 87 ~RPHPA~WR~V~GlsVlYll~LvFLlFq~~~~AR~r~~~~~~e~Ni~~Gl~a~~~~Flv~s~l~~PdGpf~RPHPavWR~ 166 (760)
..|-+.+||+.+..+....+.+.++-++...+...+++.. -|...=+.+.+..+-+..+-.+........|-..-=+
T Consensus 50 ~~Pe~~if~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~g~~~~~gl~~~a~~~~~~~~~~H~~~a~~ 126 (215)
T PF10277_consen 50 YPPESYIFRFGLNISAFFRLLIVYLRYRYVRQLASKCSRW---LNILSLVFGLLSAIGLILLAIFQSTEHPTVHYIGAVL 126 (215)
T ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccchhhH---HHHHHHHHHHHHHHHHHHhhhhccccCHHHHHHHHHH
Confidence 6799999999999999998888888887765433111111 2332223333333333444445555544666544444
Q ss_pred HHHHHHHHHHHHHHhhc
Q psy15746 167 VFGLSIFYLLALLFLLF 183 (760)
Q Consensus 167 V~GlsvlYll~LvFLLF 183 (760)
-+..+.+|..+-..+..
T Consensus 127 ff~~~~i~~~~~~~~~~ 143 (215)
T PF10277_consen 127 FFVSSFIYMLLQTILSY 143 (215)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44444444444444443
No 11
>PF03348 Serinc: Serine incorporator (Serinc); InterPro: IPR005016 This is a family of proteins which display differential expression in various tumour and cell lines. The function of these proteins is unknown. ; GO: 0016020 membrane
Probab=30.28 E-value=99 Score=35.58 Aligned_cols=65 Identities=26% Similarity=0.547 Sum_probs=44.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHH-HhccccceecCCCCCcchhhHhhHH---HHHHHHHHHhhccCCCCCccCCCcchhH
Q psy15746 90 HPAVWRMVFGLSIFYLLALLFLL-FQNYETAICRNEDVSETDNIWAGLI---AVIFFLLLISTLAFPNGPFTRPHPAVWR 165 (760)
Q Consensus 90 HPA~WR~V~GlsVlYll~LvFLl-Fq~~~~AR~r~~~~~~e~Ni~~Gl~---a~~~~Flv~s~l~~PdGpf~RPHPavWR 165 (760)
+-|+-|+-||+++.|++..++.+ ..+.+|.| +.+.+|.+ -.+++.+.++.+..|||.|. .+|+
T Consensus 73 ~~aVyRvsfal~~Ff~l~~l~~i~v~~~~d~R---------a~ihng~W~~K~l~l~~l~v~~FfiP~~~f~----~~~~ 139 (429)
T PF03348_consen 73 YSAVYRVSFALALFFFLMALLTIGVKSSRDPR---------AAIHNGFWFLKFLLLIGLIVGAFFIPNGSFI----NVYM 139 (429)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCccHH---------HHHHHhhHHHHHHHHHHHHheeEEeCchHHH----HHHH
Confidence 46788999999998888777765 23333333 23555554 46777778888889998887 5664
Q ss_pred HH
Q psy15746 166 MV 167 (760)
Q Consensus 166 ~V 167 (760)
-+
T Consensus 140 ~v 141 (429)
T PF03348_consen 140 YV 141 (429)
T ss_pred HH
Confidence 33
No 12
>KOG1543|consensus
Probab=29.85 E-value=41 Score=37.03 Aligned_cols=28 Identities=29% Similarity=0.545 Sum_probs=23.6
Q ss_pred hhhhHHHHHHHHHHHHhcCC--ccccchhH
Q psy15746 608 CWIYGAIQLTEALLCIKNGK--LLFGRTQA 635 (760)
Q Consensus 608 ~wv~~~i~~le~~~cik~g~--~~f~~~~~ 635 (760)
||.|.++.++|...|||.|+ ..|+.-|+
T Consensus 134 CWAFaa~~aie~~~~i~~g~~l~sLSeq~l 163 (325)
T KOG1543|consen 134 CWAFAATGALEDRYNIKTGGKLLSLSEQDL 163 (325)
T ss_pred hHHHHHHHHHHHHHHHHhCCccCccChhhh
Confidence 99999999999999999996 44555554
No 13
>smart00645 Pept_C1 Papain family cysteine protease.
Probab=28.13 E-value=50 Score=32.63 Aligned_cols=30 Identities=37% Similarity=0.747 Sum_probs=23.7
Q ss_pred chhhhHHHHHHHHHHHHhcCC-ccccchhHH
Q psy15746 607 QCWIYGAIQLTEALLCIKNGK-LLFGRTQAV 636 (760)
Q Consensus 607 q~wv~~~i~~le~~~cik~g~-~~f~~~~~~ 636 (760)
-||.|.++.++|+.+|+|.|+ ..++..++.
T Consensus 24 sCwAfa~~~~ie~~~~i~~~~~~~lS~q~l~ 54 (174)
T smart00645 24 SCWAFSATGALEGRYCIKTGKLVSLSEQQLV 54 (174)
T ss_pred hHHHHHHHHHHHHHHHHhcCCccccCHHHHh
Confidence 399999999999999999985 345554543
No 14
>cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access. Each subunit of the tetramer is composed of three peptides: the heavy and light chains, which together adopts the papain fold and forms the catalytic domain; and the residual propeptide region, which forms a beta barrel and points towards the substrate's N-terminus. The subunit composition is the result of the unique characteristic of procathepsin C maturation involving the cleavage of the catalytic domain and the non-autocatalytic excision of an activation peptide within its propeptide region. By removing N-terminal dipeptide extensions, cathepsin C activates granule serine peptidases (granzymes) involved in cell-mediated apoptosis, inflammation and tissue remodelling. Loss-of-function mutations in cathepsin C are assoc
Probab=26.55 E-value=55 Score=33.78 Aligned_cols=31 Identities=16% Similarity=0.435 Sum_probs=24.6
Q ss_pred chhhhHHHHHHHHHHHHhcCC-------ccccchhHHH
Q psy15746 607 QCWIYGAIQLTEALLCIKNGK-------LLFGRTQAVN 637 (760)
Q Consensus 607 q~wv~~~i~~le~~~cik~g~-------~~f~~~~~~~ 637 (760)
-||.|.+..++|++.||+.++ ..++..|+..
T Consensus 28 sCwAfa~~~~ies~~~i~~~~~~~~~~~~~lS~q~l~d 65 (243)
T cd02621 28 SCYAFASVYALEARIMIASNKTDPLGQQPILSPQHVLS 65 (243)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCccccCcccCHHHhhh
Confidence 489999999999999999886 4555555433
No 15
>PF02044 Bombesin: Bombesin-like peptide; InterPro: IPR000874 Bombesin-like peptides comprise a large family of peptides which were initially isolated from amphibian skin, where they stimulate smooth muscle contraction. They were later found to be widely distributed in mammalian neural and endocrine cells. The amphibian peptides which belong to this family are currently classified into three subfamilies [, ]; the Bombesin group, which includes bombesin and alytesin; the Ranatensin group, which includes ranatensins, litorin, and Rohdei litorin; and the Phyllolitorin group, which includes Leu(8)- and Phe(8)-phyllolitorins. In mammals and birds two categories of bombesin-like peptides are known [, ], gastrin-releasing peptide (GRP), which stimulates the release of gastrin as well as other gastrointestinal hormones, and neuromedin B (NMB), a neuropeptide whose function is not yet clear. Bombesin-like peptides, like many other active peptides, are synthesized as larger protein precursors that are enzymatically converted to their mature forms. The final peptides are eight to fourteen residues long.; GO: 0007218 neuropeptide signaling pathway; PDB: 1C9A_A 1C98_A.
Probab=25.46 E-value=22 Score=22.91 Aligned_cols=9 Identities=56% Similarity=1.261 Sum_probs=5.7
Q ss_pred hhHhhhhHH
Q psy15746 722 VFALGHFVG 730 (760)
Q Consensus 722 ~~~~~~~~~ 730 (760)
-+|+|||.|
T Consensus 3 ~WAvGh~Mg 11 (14)
T PF02044_consen 3 QWAVGHFMG 11 (14)
T ss_dssp TCHHHCT--
T ss_pred ccceeeeec
Confidence 368999987
No 16
>KOG0252|consensus
Probab=24.81 E-value=1.7e+02 Score=34.88 Aligned_cols=32 Identities=34% Similarity=0.636 Sum_probs=23.2
Q ss_pred cchhHHHHHHHHHHHHHHHHhhccchhhHHHH
Q psy15746 161 PAVWRMVFGLSIFYLLALLFLLFQNYETANLR 192 (760)
Q Consensus 161 PavWR~V~GlsvlYll~LvFLLFQn~~~ar~~ 192 (760)
-.+||+++|+..+=-+....-=---+|++|+-
T Consensus 221 d~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~ 252 (538)
T KOG0252|consen 221 DGVWRIIFGLGAVPALLVLYFRLKMPETARYT 252 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCcchhHH
Confidence 47999999999887666655544556777653
No 17
>PF12794 MscS_TM: Mechanosensitive ion channel inner membrane domain 1
Probab=21.17 E-value=6.8e+02 Score=27.85 Aligned_cols=80 Identities=19% Similarity=0.205 Sum_probs=39.2
Q ss_pred ccccccceeecccceeeeechhhHHH--HHHHHHHHHhh--h--hccc-CCCCcccchhhhHHHHHHHHhhhh---hccc
Q psy15746 12 KFSLINECAVEDISLDVFYKPHTIAA--LLCSIFGVIVA--S--FIRN-EDVSETDNIWAGLIAVIFFLLLIS---TLAF 81 (760)
Q Consensus 12 ~f~~ine~~vdDit~~fFYkPHTiT~--L~i~~~~LiY~--A--f~~d-~~~~~~~Ni~rGv~a~i~~FLv~s---~l~f 81 (760)
.-+.+|++.=+--+-++-|.|.++.. |...-.-+... . .... ..++...++..|+.++....+++. -+.-
T Consensus 27 ~L~~~~~~ig~~~~D~~~~T~~al~~tll~alp~pl~~~~~g~~L~~~~~~~~~~~~l~~~l~~~a~~~~~~~~~~~l~r 106 (340)
T PF12794_consen 27 RLERIAKRIGKVRQDSFSHTPRALLLTLLLALPLPLLLLAIGYLLQFAAWSSPFSVALGAALLAMALFWLVFEFFRRLLR 106 (340)
T ss_pred HHHHHHHHcCCccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 33444444333334467778887652 22221112111 1 1222 223444678888876665544444 4457
Q ss_pred CCCC----ccCCch
Q psy15746 82 PNGP----FTRPHP 91 (760)
Q Consensus 82 PdGp----F~RPHP 91 (760)
|||- |..|-+
T Consensus 107 p~Gl~~~HF~w~~~ 120 (340)
T PF12794_consen 107 PNGLAERHFGWPKE 120 (340)
T ss_pred CCCeEeccCCCCHH
Confidence 9985 455544
No 18
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=21.14 E-value=1.3e+02 Score=30.65 Aligned_cols=27 Identities=22% Similarity=0.515 Sum_probs=20.5
Q ss_pred CCccCCchhHHHHHHHHHHHHHHHHHHHHH
Q psy15746 84 GPFTRPHPAVWRMVFGLSIFYLLALLFLLF 113 (760)
Q Consensus 84 GpF~RPHPA~WR~V~GlsVlYll~LvFLlF 113 (760)
-.|.|-||.+| .||-+.|+..++-++.
T Consensus 29 ~~Fi~~HP~L~---~~M~~~y~~~~~lm~~ 55 (155)
T PF10777_consen 29 SSFIRNHPYLC---LAMYAAYLAVAALMYY 55 (155)
T ss_pred HHHHHhCcHHH---HHHHHHHHHHHHHHHh
Confidence 45899999987 7788888876665554
No 19
>TIGR03097 PEP_O_lig_1 probable O-glycosylation ligase, exosortase system type 1-associated. These proteins are members of the O-antigen polymerase (wzy) family described by Pfam model pfam04932. This group is associated with genomes and ususally genomic contexts containing elements of the exosortase/PEP-CTERM protein export system, specificially the type 1 variety of this system described by the Genome Property, GenProp0652.
Probab=21.01 E-value=1.2e+03 Score=26.13 Aligned_cols=52 Identities=12% Similarity=0.058 Sum_probs=28.6
Q ss_pred chhhHHH---------HHHHHHHHHhhhhcccCCCCcccchhhhHHHHHHHHhhhhhcccCC
Q psy15746 31 KPHTIAA---------LLCSIFGVIVASFIRNEDVSETDNIWAGLIAVIFFLLLISTLAFPN 83 (760)
Q Consensus 31 kPHTiT~---------L~i~~~~LiY~Af~~d~~~~~~~Ni~rGv~a~i~~FLv~s~l~fPd 83 (760)
+||-++. +.++.+.++...+.++. .+...+...-........+.+|.+...|
T Consensus 34 ~~~~~~~~~~~~~p~~~~~~~~~l~~l~~~~~k-~~~~~~~~~~~lllf~~~~~ls~l~s~~ 94 (402)
T TIGR03097 34 NPHRLTWGFAYDAPFAALVAGVTLAGLLFSKER-KSIPWTPEVIFLLLLTIWMTVTTFFAFD 94 (402)
T ss_pred cHHHHHHHHHccChHHHHHHHHHHHHHHhcccc-CCCCCChHHHHHHHHHHHHHHHHHhcCC
Confidence 7887543 34444555555555443 3344444444455566666777777666
No 20
>COG4194 Predicted membrane protein [General function prediction only]
Probab=20.29 E-value=1.8e+02 Score=32.95 Aligned_cols=82 Identities=17% Similarity=0.368 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHhhhhhhhcccceeee-eccCCCCCcccccceEE---EEecCCCceeeeeccccccccccccHHHHhhc
Q psy15746 644 VMFLLAVLCVYGCVLWHRYVSEILETV-VTKKPNRPQRRNEDVFT---VFFSKSNNFRIDMDKEYGVNCSDISLEKIYNH 719 (760)
Q Consensus 644 ~~~~~t~~~~~~~~w~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 719 (760)
.++++++..+-++.=|+=+.|.....+ +.+++.-+..|++|-+- .+--.-|.=||-+||..|++-.
T Consensus 253 ~vi~~iili~~s~l~l~l~iGq~gsrl~~r~~~~~~~m~dDdkyWk~GiiY~n~nDprIfV~krfGigyT---------- 322 (350)
T COG4194 253 HVIIAIILIAVSTLALALKIGQGGSRLKIRRAIPNRDMRDDDKYWKAGIIYVNPNDPRIFVEKRFGIGYT---------- 322 (350)
T ss_pred hhHHHHHHHHHHHHHHHHHhccCcceEEeccCCCCCCccccchhhcccEEEECCCCCeEEEEecCCceeE----------
Confidence 344555555555666666777665555 44444334477777653 2333445569999999998742
Q ss_pred chhhHhhhhHHHHHHHHHH
Q psy15746 720 LDVFALGHFVGWAFKAVLI 738 (760)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~ 738 (760)
+=.||=.||.+-|+++
T Consensus 323 ---iN~ah~~a~L~~~v~v 338 (350)
T COG4194 323 ---INFAHGVAWLFIAVFV 338 (350)
T ss_pred ---EEcCCchHhHHHHHHH
Confidence 3479999999887654
Done!