RPS-BLAST 2.2.26 [Sep-21-2011]

Database: pdb70 
           27,921 sequences; 6,701,793 total letters

Searching..................................................done

Query= psy15746
         (760 letters)



>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
           acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
           synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
          Length = 2006

 Score = 50.0 bits (119), Expect = 3e-06
 Identities = 80/521 (15%), Positives = 151/521 (28%), Gaps = 160/521 (30%)

Query: 53  NEDVSETDNIWAGLIAVIFFLLLISTLAFPN--GPFTRPHPAVWRMVFGLSIFYLLALLF 110
           +E  +      A L+    FL  +S+L  P+  G F +                   +L 
Sbjct: 52  DEPTTP-----AELVGK--FLGYVSSLVEPSKVGQFDQ-------------------VLN 85

Query: 111 LLFQNYETAICRNEDV----------SETDNIWAGLIAVIFFLLLISTLAFPNGPFTRPH 160
           L    +E       D+          ++T  +    +   +     +       PF +  
Sbjct: 86  LCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYI----TARIMAKRPFDKKS 141

Query: 161 P-AVWR----------MVF---GLSIFYL--LALLFLLFQNY-----ETANLRILFFGNY 199
             A++R           +F   G +  Y   L  L+  +        + +   +      
Sbjct: 142 NSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRT 201

Query: 200 PKKRTHIFEMPPSHPIVIIRLSFLGIMVAPSARIDMDKEYGVNCSDISLEKIYNHLDVFA 259
                 +F    +  + I  L +L     PS   D D  Y ++   IS   I     V  
Sbjct: 202 TLDAEKVF----TQGLNI--LEWLE---NPSNTPDKD--YLLSIP-ISCPLIG----VIQ 245

Query: 260 LGHFV------GW-------AFKAVLIRHMGILWA----MSVMWE-FTEIAFAHLLPNFI 301
           L H+V      G+         K       G++ A     +  WE F             
Sbjct: 246 LAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSV--------- 296

Query: 302 ECWWDALILDILLCNGIGIWVGLKLCKWFEMREYKWVSI-----KDIHSTSGKLKRAMLQ 356
                   + +L       ++G++ C       Y   S+     +D    +  +   ML 
Sbjct: 297 -----RKAITVLF------FIGVR-CY----EAYPNTSLPPSILEDSLENNEGVPSPMLS 340

Query: 357 FTPQSWTHV-RWLDPTCTYMR-----FIGVC----QMVLF---WQLSELNTFFLKH---- 399
            +  +   V  +++ T +++       I +      +V+      L  LN    K     
Sbjct: 341 ISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPS 400

Query: 400 ---IFEMPPSHPIVIIRLSFLGIMVAP--SARQYYSFVTDTQCKRLGTQCWIYGAIQLTE 454
                 +P S   +     FL +  +P  S        +D   K L      + A  +  
Sbjct: 401 GLDQSRIPFSERKLKFSNRFLPVA-SPFHS--HLLVPASDLINKDLVKNNVSFNAKDIQI 457

Query: 455 ALLCIKNGKLLFGRTQAVNILAWLSVMFLLAVLCVYGCVLW 495
            +    +G  L  R  + +I   +     +  L V     W
Sbjct: 458 PVYDTFDGSDL--RVLSGSISERIVDC--IIRLPVK----W 490



 Score = 45.4 bits (107), Expect = 8e-05
 Identities = 80/542 (14%), Positives = 146/542 (26%), Gaps = 201/542 (37%)

Query: 187 ETANLR--ILFFGNYPKKRTHIFEMPPSHPIVIIRL--SFLGIMVAPSARIDMDKEYGVN 242
           +  + R   L  G+      H+  +P +   +  +L   F  I+  P+     D E    
Sbjct: 2   DAYSTRPLTLSHGSL----EHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDE---P 54

Query: 243 CSDISLEKIYNHLDVFALGHFVGW-----------AFKAVLIRHMGILWAMSVMWEF--- 288
            +   L           +G F+G+            F  VL            + EF   
Sbjct: 55  TTPAEL-----------VGKFLGYVSSLVEPSKVGQFDQVL---------NLCLTEFENC 94

Query: 289 ----TEI-AFAHLLP-----------NFIECWWDALILD--------------------- 311
                +I A A  L              I+ +  A I+                      
Sbjct: 95  YLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNA 154

Query: 312 --ILLCNGIGIWVGLKLCKWF-EMRE----YKWVSIKD-IHSTSGKLKRAMLQFTPQSWT 363
             + +  G G         +F E+R+    Y  + + D I  ++  L    L  T     
Sbjct: 155 QLVAIFGGQGN-----TDDYFEELRDLYQTYHVL-VGDLIKFSAETLSE--LIRTTLDAE 206

Query: 364 HV--------RWLD-----PTCTYMR-------FIGVCQMVLFW---QLSELNTFFLKHI 400
            V         WL+     P   Y+         IGV Q+  +    +L       L+  
Sbjct: 207 KVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSY 266

Query: 401 FEMPPSHPIVIIRLSFLGIMVAPSARQYYSFVTDTQCKRL---GTQCW-IYGAIQLTEAL 456
            +    H   ++  + + I    S   ++  V       L   G +C+  Y    L  ++
Sbjct: 267 LKGATGHSQGLV--TAVAIAETDSWESFFVSVRKA-ITVLFFIGVRCYEAYPNTSLPPSI 323

Query: 457 L--CIKNG---------------KLLFGRTQAVN-ILA---WLSV-------MFLLAVLC 488
           L   ++N                + +       N  L     + +            V+ 
Sbjct: 324 LEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNL---VVS 380

Query: 489 -----VYGCVLW-------------------------HRYVSVMFFYCPYFDRQYYSFVT 518
                +YG  L                          +R++ V     P+         +
Sbjct: 381 GPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVA---SPFHS-HLLVPAS 436

Query: 519 DTQCKRLGTQCWIYGAIQLTEALLCIKNGKLLFGRTQAVNILAWLSVMFLLAVLCVYGCV 578
           D   K L      + A  +   +    +G  L  R  + +I   +     +  L V    
Sbjct: 437 DLINKDLVKNNVSFNAKDIQIPVYDTFDGSDL--RVLSGSISERIVDC--IIRLPVK--- 489

Query: 579 LW 580
            W
Sbjct: 490 -W 490



 Score = 44.3 bits (104), Expect = 2e-04
 Identities = 51/308 (16%), Positives = 88/308 (28%), Gaps = 120/308 (38%)

Query: 30  YKPHTIAALLCSIF----GVIVASFIRNEDVSETDNIWAGL-------IAVIFFLLLIST 78
           + P  + + L        G++ A  I     +ETD+ W          I V+FF+ +   
Sbjct: 258 FTPGELRSYLKGATGHSQGLVTAVAI-----AETDS-WESFFVSVRKAITVLFFIGVRCY 311

Query: 79  LAFPNGPFT-------------RPHPAVWRM--VFGLSIFYLLALLFLLFQNYETAICRN 123
            A+PN                  P P    M  +  L+   +   +             N
Sbjct: 312 EAYPNTSLPPSILEDSLENNEGVPSP----MLSISNLTQEQVQDYVNKT----------N 357

Query: 124 EDVSETDNIWAGLI-----AVI--------FFLLLISTLAFPNG------PFTRPHPAVW 164
             +     +   L+      V+           L +     P+G      PF+       
Sbjct: 358 SHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKF- 416

Query: 165 RMVFGLSIF------YL----------LALLFLLFQN-------YET---ANLRILFFGN 198
              F L +        L          L    + F         Y+T   ++LR+L  G+
Sbjct: 417 SNRF-LPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVL-SGS 474

Query: 199 YPKKRTH-IFEMP----------PSH-----PIVIIRLSFL--------GIMVAPSARID 234
             ++    I  +P           +H     P     L  L        G+ V  +  +D
Sbjct: 475 ISERIVDCIIRLPVKWETTTQFKATHILDFGPGGASGLGVLTHRNKDGTGVRVIVAGTLD 534

Query: 235 --MDKEYG 240
              D +YG
Sbjct: 535 INPDDDYG 542



 Score = 32.3 bits (73), Expect = 0.80
 Identities = 71/476 (14%), Positives = 133/476 (27%), Gaps = 189/476 (39%)

Query: 334 EYKW-VSIKDIHSTSGKLKRAMLQFTPQSWTHVRWLD--PTCT---YMRFIGVC------ 381
           E+   V        + +L+    +  P+  T     D  PT       +F+G        
Sbjct: 17  EHVLLVP-TASFFIASQLQEQFNKILPEP-TEGFAADDEPTTPAELVGKFLGYVSSLVEP 74

Query: 382 ------QMVLFWQLSELNTFFLK----HIF--EMPPSHPIVIIRLSFLGIMVAPSARQYY 429
                   VL   L+E    +L+    H    ++   +   +++   L        + Y 
Sbjct: 75  SKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKEL-------IKNYI 127

Query: 430 S--FVTDTQCKR--------------------LGTQ-----CW--------IYGA----- 449
           +   +      +                     G Q      +         Y       
Sbjct: 128 TARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVGDL 187

Query: 450 IQLTEALL-----CIKNGKLLFGRTQAVNILAWL-------SVMFLLAVLCVYGCVLWHR 497
           I+ +   L        + + +F  TQ +NIL WL          +LL++           
Sbjct: 188 IKFSAETLSELIRTTLDAEKVF--TQGLNILEWLENPSNTPDKDYLLSIP---------- 235

Query: 498 YVSVMFFYCPYFDRQYYSFVTDTQCKRLGTQCWIYGAIQLT-EALLCIKNGKLLFGRTQA 556
            +S     CP         +   Q         + G    T   L     G    G +Q 
Sbjct: 236 -IS-----CP--------LIGVIQLAHYVVTAKLLG---FTPGELRSYLKG--ATGHSQG 276

Query: 557 VNILA--------WLSVMFLLAVLCVYGCVLWHRYVSILKYRQYYSFVTDTQCKRLGTQC 608
           + + A        W S  F ++V          + +++L       F        +G +C
Sbjct: 277 L-VTAVAIAETDSWES--FFVSVR---------KAITVL-------F-------FIGVRC 310

Query: 609 W-IYGAIQLTEALL--CIKNGKLLFGRTQAVNILAWLSVMFLLAVLCVYGCVLWHRYVSE 665
           +  Y    L  ++L   ++N +   G           S M     L +           E
Sbjct: 311 YEAYPNTSLPPSILEDSLENNE---GVP---------SPM-----LSISNLTQ------E 347

Query: 666 ILETVVTKKPNRPQRRNEDVFTVFFSKSNNFRI-----DMDKEYGVNCSDISLEKI 716
            ++  V  K N      + V     + + N  +      +   YG+N   ++L K 
Sbjct: 348 QVQDYV-NKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSL---YGLN---LTLRKA 396


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
           programmed cell death; HET: DTP; 6.90A {Drosophila
           melanogaster} PDB: 3iz8_A*
          Length = 1221

 Score = 38.3 bits (88), Expect = 0.010
 Identities = 59/358 (16%), Positives = 106/358 (29%), Gaps = 101/358 (28%)

Query: 60  DNIWAGLIAVIFFL---LLIST----LAFPNGPFTRPHPAVWRMVFGLSIFYLLALLFLL 112
            N+        F L   +L++T    +       T  H ++      L+   + +L  L 
Sbjct: 251 LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL-LLK 309

Query: 113 FQNYETAICRNEDVSETDNIWAGLIAVIFFLLLISTLAFPNGPFTRPHPAVW-------- 164
           + +     CR +D+            +      +S +        R   A W        
Sbjct: 310 YLD-----CRPQDLPRE--------VLTTNPRRLSII----AESIRDGLATWDNWKHVNC 352

Query: 165 ---RMVFGLSIFYLLALLFLLFQNYETANLRILFFGNYPKKRTHIFEMPPSHPIVIIRLS 221
                +   S+  L           E A  R +F       R  +F  PPS  I  I LS
Sbjct: 353 DKLTTIIESSLNVL-----------EPAEYRKMF------DRLSVF--PPSAHIPTILLS 393

Query: 222 FL-GIMVAPSARIDMD------------KEYGVNCSDISLE-------------KI---Y 252
            +   ++     + ++            KE  ++   I LE              I   Y
Sbjct: 394 LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHY 453

Query: 253 NHLDVFALGHFV-----GWAFKAVLIRHMGILWAMSVMWEFTEIAFAHLLPNFIECWWDA 307
           N    F     +      + +   +  H+  +     M  F  + F      F+E     
Sbjct: 454 NIPKTFDSDDLIPPYLDQYFYS-HIGHHLKNIEHPERMTLFRMV-FLDF--RFLE---QK 506

Query: 308 LILDILLCNGIGIWVGLKLCKWFEMREYKWVSIKDIHSTSGKLKRAMLQFTPQSWTHV 365
           +  D    N  G  +        +++ YK   I D      +L  A+L F P+   ++
Sbjct: 507 IRHDSTAWNASGSILNTLQ----QLKFYK-PYICDNDPKYERLVNAILDFLPKIEENL 559



 Score = 34.1 bits (77), Expect = 0.22
 Identities = 64/522 (12%), Positives = 135/522 (25%), Gaps = 199/522 (38%)

Query: 381 CQMVLFWQLSELNTFFLKHIFEMPPSHPIVIIRLSFLGIMVAPSARQYYSFVTDTQCKRL 440
           C+ V     S L+   + HI        +      F   +++        FV +      
Sbjct: 35  CKDVQDMPKSILSKEEIDHIIMSK--DAVSGTLRLF-WTLLSKQEEMVQKFVEEVLRINY 91

Query: 441 GTQCWIYGAI----------------------------------------QLTEALLCIK 460
               ++   I                                        +L +ALL ++
Sbjct: 92  K---FLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELR 148

Query: 461 NGKLL-------FGRTQ-AVNILA-------------WLSV---------MFLLAVLCV- 489
             K +        G+T  A+++               WL++         + +L  L   
Sbjct: 149 PAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ 208

Query: 490 ----------YGCVLWHRYVSVMFFYCPYFDRQYY-----------------SFVTDTQC 522
                     +   +  R  S+          + Y                 +F  +  C
Sbjct: 209 IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAF--NLSC 266

Query: 523 KRLGTQCWIYGAIQLTEAL-------LCIKNGKLLFGRTQAVNILA-WLSV-MFLLA--- 570
           K L T        Q+T+ L       + + +  +     +  ++L  +L      L    
Sbjct: 267 KILLTT----RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREV 322

Query: 571 ------VLCVYGCVLWHRYVSILKYRQYYSFVTDTQCKRLGTQCWIYGAIQLTEALLCIK 624
                  L +    +    ++     ++        C +L T       I+ +  +L   
Sbjct: 323 LTTNPRRLSIIAESI-RDGLATWDNWKHV------NCDKLTT------IIESSLNVLEPA 369

Query: 625 NGKLLFGRTQAVNIL---AWLSVMFLLAVLCVYGCVLWHRYVSEILETVVT--------- 672
             + +F     +++    A +  + L         ++W   +   +  VV          
Sbjct: 370 EYRKMF---DRLSVFPPSAHIPTILL--------SLIWFDVIKSDVMVVVNKLHKYSLVE 418

Query: 673 KKPNRPQRRNEDVFTVFFSKSNNFRIDMDK----EY----GVNCSDISLEK----IYNHL 720
           K+P         ++     K  N    + +     Y      +  D+         Y+H 
Sbjct: 419 KQPKESTISIPSIYLELKVKLEN-EYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSH- 476

Query: 721 DVFALGH-----------------FVGWAFKAVLIRHMGILW 745
               +GH                 F+ + F    IRH    W
Sbjct: 477 ----IGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAW 514


>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane
           protein, P-type ATPase, active transport, cryo-electron
           microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
          Length = 920

 Score = 36.5 bits (85), Expect = 0.041
 Identities = 20/132 (15%), Positives = 46/132 (34%), Gaps = 19/132 (14%)

Query: 62  IWAGLIAVIFFLLLISTL--AFPNGPFTRPHPAVWRMVFGLSIFYLLALLFLLFQNYETA 119
           +  G++  +   + ++T+     NG   +    +  ++F         L+F         
Sbjct: 760 VLLGVVLAVGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIF--------- 810

Query: 120 ICRNEDVSETDNIWAGLIAVIFFLLLISTLAFPNGPFTRPHP------AVWRMVFGLSIF 173
           I R      +      L   IF + +++T     G F            +W  +F   IF
Sbjct: 811 ITRANGPFWSSIPSWQLSGAIFLVDILATCFTIWGWFEHSDTSIVAVVRIW--IFSFGIF 868

Query: 174 YLLALLFLLFQN 185
            ++  ++ + Q+
Sbjct: 869 CIMGGVYYILQD 880


>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump,
           ATP-binding, hydrogen ION transport, hydrolase, ION
           transport; HET: ACP; 3.60A {Arabidopsis thaliana}
          Length = 885

 Score = 30.7 bits (70), Expect = 2.0
 Identities = 21/135 (15%), Positives = 36/135 (26%), Gaps = 22/135 (16%)

Query: 62  IWAGLIAVIF----FLLLISTLAFPNG----PFTRPHPAVWRMVFGLSIFYLLALLFLLF 113
           +  G    I     F     T  F +          +  +   V+        AL+F   
Sbjct: 714 VVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIF--- 770

Query: 114 QNYETAICRNEDVSETDNIWAGLIAVIFFLLLISTLAFPNGPFTRPHPAV-----WRMVF 168
                 + R+   S  +   A L+       LI+TL      +              +++
Sbjct: 771 ------VTRSRSWSFVERPGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIW 824

Query: 169 GLSIFYLLALLFLLF 183
             SI     L    F
Sbjct: 825 LYSIVTYFPLDVFKF 839


>1khc_A DNA cytosine-5 methyltransferase 3B2; five beta-sheets barrel
           followed by five-helix bundle; HET: DNA; 1.80A {Mus
           musculus} SCOP: b.34.9.2 PDB: 3flg_A* 3qkj_A*
          Length = 147

 Score = 29.0 bits (64), Expect = 2.8
 Identities = 7/49 (14%), Positives = 20/49 (40%)

Query: 304 WWDALILDILLCNGIGIWVGLKLCKWFEMREYKWVSIKDIHSTSGKLKR 352
           WW A+++     +      G++  +WF   ++  +S   + +     + 
Sbjct: 27  WWPAMVVSWKATSKRQAMPGMRWVQWFGDGKFSEISADKLVALGLFSQH 75


>4b28_A Metallopeptidase, family M24, putative; lyase,
           imethylsulfonioproionate, acrylate, dimethylsulfide;
           2.15A {Roseobacter denitrificans och 114}
          Length = 470

 Score = 29.9 bits (67), Expect = 3.5
 Identities = 12/86 (13%), Positives = 25/86 (29%), Gaps = 8/86 (9%)

Query: 650 VLCVYGCVLWHRYVSEILETVVTKKPNRPQRRNEDVFTVFFSKSNNFRIDMDKEYGVNCS 709
           +      V  +   ++I  +               +      +     ++M K  GV   
Sbjct: 315 ISFDTDLVGAYGICTDISRSWWIGDQKPRADMIYAM--QHGVEHIRTNMEMLKP-GVMIP 371

Query: 710 DIS-----LEKIYNHLDVFALGHFVG 730
           ++S     L+  +       L H VG
Sbjct: 372 ELSANTHVLDAKFQKQKYGCLMHGVG 397


>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog,
           transport protein; 3.20A {Synechocystis} PDB: 3q17_A
          Length = 466

 Score = 29.3 bits (66), Expect = 5.2
 Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 2/56 (3%)

Query: 64  AGLIAVIFFLLL--ISTLAFPNGPFTRPHPAVWRMVFGLSIFYLLALLFLLFQNYE 117
            G++   F   +  +            P P +  +V  L    ++AL F L + + 
Sbjct: 42  TGVLGAGFKSAVNNMLQWRSQLAQILAPIPPLAWLVTALISGGMVALSFWLMKRFA 97



 Score = 29.3 bits (66), Expect = 5.2
 Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 2/56 (3%)

Query: 134 AGLIAVIFFLLL--ISTLAFPNGPFTRPHPAVWRMVFGLSIFYLLALLFLLFQNYE 187
            G++   F   +  +            P P +  +V  L    ++AL F L + + 
Sbjct: 42  TGVLGAGFKSAVNNMLQWRSQLAQILAPIPPLAWLVTALISGGMVALSFWLMKRFA 97


>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288;
           multidrug transporter, transport protein; HET: ANP;
           2.90A {Thermotoga maritima}
          Length = 598

 Score = 29.1 bits (66), Expect = 7.1
 Identities = 11/70 (15%), Positives = 21/70 (30%), Gaps = 11/70 (15%)

Query: 133 WAGLIAVIFFLLLISTLAFPNGPF-----------TRPHPAVWRMVFGLSIFYLLALLFL 181
               + ++F  + +S++     P+            R    + R +  L   Y L  L  
Sbjct: 35  HTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYALTSLLF 94

Query: 182 LFQNYETANL 191
             Q      L
Sbjct: 95  WLQGKIMLTL 104



 Score = 29.1 bits (66), Expect = 7.2
 Identities = 12/87 (13%), Positives = 20/87 (22%), Gaps = 22/87 (25%)

Query: 30  YKPHTIAALLCSIFGVIVASFIRNEDVSETDNIWAGLIAVIFFLLLISTLAFPNGPFTRP 89
           +    I   +      I                  G+++       I  + F    F   
Sbjct: 35  HTFTLIMVFVFVTVSSI-----------------LGVLSPYLIGKTI-DVVFVPRRFD-- 74

Query: 90  HPAVWRMVFGLSIFYLLALLFLLFQNY 116
              + R +  L   Y L  L    Q  
Sbjct: 75  --LLPRYMLILGTIYALTSLLFWLQGK 99


  Database: pdb70
    Posted date:  Sep 4, 2012  3:40 AM
  Number of letters in database: 6,701,793
  Number of sequences in database:  27,921
  
Lambda     K      H
   0.332    0.144    0.480 

Gapped
Lambda     K      H
   0.267   0.0567    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 12,152,336
Number of extensions: 730946
Number of successful extensions: 1604
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1585
Number of HSP's successfully gapped: 39
Length of query: 760
Length of database: 6,701,793
Length adjustment: 101
Effective length of query: 659
Effective length of database: 3,881,772
Effective search space: 2558087748
Effective search space used: 2558087748
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 61 (27.6 bits)