BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15750
(115 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9V5E1|PAL1_DROME Peptidyl-alpha-hydroxyglycine alpha-amidating lyase 1 OS=Drosophila
melanogaster GN=Pal1 PE=1 SV=1
Length = 541
Score = 73.2 bits (178), Expect = 4e-13, Method: Composition-based stats.
Identities = 32/54 (59%), Positives = 39/54 (72%)
Query: 52 PISVDTVLTLDKSTGLLIDAWGKNKFYMPHGCTVDNKGFIWLTDVALHQVFKTP 105
PI T+L L+ +TG + WGKN FYMPHG TVD + +WLTDVA+HQVFK P
Sbjct: 150 PIRESTILALEPATGKVQYDWGKNFFYMPHGLTVDPEDNVWLTDVAMHQVFKFP 203
>sp|Q9W1L5|PAL2_DROME Peptidyl-alpha-hydroxyglycine alpha-amidating lyase 2 OS=Drosophila
melanogaster GN=Pal2 PE=1 SV=2
Length = 406
Score = 69.3 bits (168), Expect = 7e-12, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 34/52 (65%)
Query: 52 PISVDTVLTLDKSTGLLIDAWGKNKFYMPHGCTVDNKGFIWLTDVALHQVFK 103
PI +T+ LD TG + WG N FYMPHG T+D G W+TDVA+HQ FK
Sbjct: 154 PIKENTIYVLDAKTGAIKSGWGSNMFYMPHGLTIDLHGNYWITDVAMHQAFK 205
>sp|P10731|AMD_BOVIN Peptidyl-glycine alpha-amidating monooxygenase OS=Bos taurus GN=PAM
PE=1 SV=2
Length = 972
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 52 PISVDTVLTLDKSTGLLIDAWGKNKFYMPHGCTVDNKGFIWLTDVALHQVFK 103
PI DT+L +D + ++ + GKN FY+PHG ++D G W+TDVALHQVFK
Sbjct: 553 PIEEDTILVIDPNNAAVLQSSGKNLFYLPHGLSIDKDGNYWVTDVALHQVFK 604
>sp|P19021|AMD_HUMAN Peptidyl-glycine alpha-amidating monooxygenase OS=Homo sapiens
GN=PAM PE=1 SV=2
Length = 973
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 52 PISVDTVLTLDKSTGLLIDAWGKNKFYMPHGCTVDNKGFIWLTDVALHQVFK 103
PI DT+L +D + ++ + GKN FY+PHG ++D G W+TDVALHQVFK
Sbjct: 553 PIEEDTILVIDPNNAAVLQSSGKNLFYLPHGLSIDKDGNYWVTDVALHQVFK 604
>sp|P14925|AMD_RAT Peptidyl-glycine alpha-amidating monooxygenase OS=Rattus norvegicus
GN=Pam PE=1 SV=1
Length = 976
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 52 PISVDTVLTLDKSTGLLIDAWGKNKFYMPHGCTVDNKGFIWLTDVALHQVFK 103
PI DT+L +D + ++ + GKN FY+PHG ++D G W+TDVALHQVFK
Sbjct: 556 PIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFK 607
>sp|P97467|AMD_MOUSE Peptidyl-glycine alpha-amidating monooxygenase OS=Mus musculus
GN=Pam PE=1 SV=2
Length = 979
Score = 66.2 bits (160), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 52 PISVDTVLTLDKSTGLLIDAWGKNKFYMPHGCTVDNKGFIWLTDVALHQVFK 103
PI DT+L +D + ++ + GKN FY+PHG ++D G W+TDVALHQVFK
Sbjct: 556 PIEEDTILVIDPNKAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFK 607
>sp|P08478|AMDA_XENLA Peptidyl-glycine alpha-amidating monooxygenase A OS=Xenopus laevis
GN=pam-a PE=1 SV=3
Length = 935
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 52 PISVDTVLTLDKSTGLLIDAWGKNKFYMPHGCTVDNKGFIWLTDVALHQVFK 103
PI T+L +D S+ ++ + GKN F++PHG T+D G W+TDVALHQVFK
Sbjct: 449 PIQESTILVVDPSSSKVLKSTGKNLFFLPHGLTIDRDGNYWVTDVALHQVFK 500
>sp|P12890|AMDB_XENLA Peptidyl-glycine alpha-amidating monooxygenase B OS=Xenopus laevis
GN=pam-b PE=2 SV=1
Length = 875
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 52 PISVDTVLTLDKSTGLLIDAWGKNKFYMPHGCTVDNKGFIWLTDVALHQVFK 103
PI T+L +D +T ++ + G+N F++PHG T+D G W+TDVALHQVFK
Sbjct: 453 PIQESTILVVDPNTSKVLKSTGQNLFFLPHGLTIDRDGNYWVTDVALHQVFK 504
>sp|P91268|PAL_CAEEL Probable peptidyl-alpha-hydroxyglycine alpha-amidating lyase
F21F3.1 OS=Caenorhabditis elegans GN=F21F3.1 PE=1 SV=2
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 68 LIDAWGKNKFYMPHGCTVDNKGFIWLTDVALHQVFK 103
+ID +G FYMPHG T+DN G W+TDV HQV K
Sbjct: 115 VIDEFGAGLFYMPHGLTIDNNGDYWVTDVGSHQVHK 150
>sp|P83388|AMDL_CAEEL Probable peptidyl-glycine alpha-amidating monooxygenase T19B4.1
OS=Caenorhabditis elegans GN=T19B4.1 PE=1 SV=2
Length = 663
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 50 KRPISVDTVLTLDKSTGL--LIDAWGKNKFYMPHGCTVDNKGFIWLTDVALHQVFK 103
K+PI+ +L + S L G +FY+PHG VD GF++ TDV H V K
Sbjct: 395 KKPIADPVILVISYSGNQTKLERKLGGGQFYLPHGIYVDKDGFVYTTDVGSHTVAK 450
>sp|Q8BPT6|IMP2L_MOUSE Mitochondrial inner membrane protease subunit 2 OS=Mus musculus
GN=Immp2l PE=2 SV=1
Length = 175
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 2 LVGIPIGITFCDSIGYVARVDGTSMQP 28
V +P+ +TF D + VARV+G+SMQP
Sbjct: 20 FVAVPVAVTFLDRVACVARVEGSSMQP 46
>sp|Q96T52|IMP2L_HUMAN Mitochondrial inner membrane protease subunit 2 OS=Homo sapiens
GN=IMMP2L PE=2 SV=1
Length = 175
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 1 MLVGIPIGITFCDSIGYVARVDGTSMQP 28
V +P+ +TF D + VARV+G SMQP
Sbjct: 19 FFVAVPVAVTFLDRVACVARVEGASMQP 46
>sp|Q2KI92|IMP2L_BOVIN Mitochondrial inner membrane protease subunit 2 OS=Bos taurus
GN=IMMP2L PE=2 SV=1
Length = 177
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 1 MLVGIPIGITFCDSIGYVARVDGTSMQP 28
V +P+ +TF D + VARV+G SMQP
Sbjct: 19 FFVAVPVAVTFLDRVACVARVEGASMQP 46
>sp|Q6AZD4|IMP2L_DANRE Mitochondrial inner membrane protease subunit 2 OS=Danio rerio
GN=immp2l PE=2 SV=1
Length = 183
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 1 MLVGIPIGITFCDSIGYVARVDGTSMQP 28
V +P+ +T D + YVARV+G SMQP
Sbjct: 18 FFVAVPVTVTVLDRLAYVARVEGASMQP 45
>sp|Q5PQ63|IMP2L_XENLA Mitochondrial inner membrane protease subunit 2 OS=Xenopus laevis
GN=immp2l PE=2 SV=1
Length = 170
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 1 MLVGIPIGITFCDSIGYVARVDGTSMQP 28
V +P+ +TF D + +ARV+G SMQP
Sbjct: 16 FFVAVPVTVTFLDRVACIARVEGVSMQP 43
>sp|A6ULQ4|MTNA_SINMW Methylthioribose-1-phosphate isomerase OS=Sinorhizobium medicae
(strain WSM419) GN=mtnA PE=3 SV=1
Length = 364
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 17/88 (19%)
Query: 4 GIPIGI-TFCDSIGYVARVD-GTSMQPVCPSTYMDTLYCSIEESESGTKRPISVDTVLTL 61
G P+ I T C++ G++A VD GT+ P+ Y ++EE P+ V T
Sbjct: 155 GEPVKILTHCNA-GWLATVDYGTATAPI---------YMAVEEG-----LPVHVYVDETR 199
Query: 62 DKSTGLLIDAWGKNKFYMPHGCTVDNKG 89
++ G + AW N +PH VDN G
Sbjct: 200 PRNQGAYLTAWEMNGHGVPHTLIVDNAG 227
>sp|A6X8E9|MTNA_OCHA4 Methylthioribose-1-phosphate isomerase OS=Ochrobactrum anthropi
(strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=mtnA PE=3
SV=1
Length = 364
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 17/88 (19%)
Query: 4 GIPIGI-TFCDSIGYVARVD-GTSMQPVCPSTYMDTLYCSIEESESGTKRPISVDTVLTL 61
G P+ I T C++ G++A VD GT+ P+ Y ++EE P+ V T
Sbjct: 155 GEPVRILTHCNA-GWLATVDYGTATAPI---------YMAVEEG-----IPVHVYVDETR 199
Query: 62 DKSTGLLIDAWGKNKFYMPHGCTVDNKG 89
++ G + AW N +PH VDN G
Sbjct: 200 PRNQGAYLTAWEMNGHGVPHTLIVDNAG 227
>sp|Q92TI2|MTNA_RHIME Methylthioribose-1-phosphate isomerase OS=Rhizobium meliloti
(strain 1021) GN=mtnA PE=3 SV=1
Length = 364
Score = 32.7 bits (73), Expect = 0.74, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 17/88 (19%)
Query: 4 GIPIGI-TFCDSIGYVARVD-GTSMQPVCPSTYMDTLYCSIEESESGTKRPISVDTVLTL 61
G P+ I T C++ G++A VD GT+ P+ Y ++EE P+ V T
Sbjct: 155 GEPVRILTHCNA-GWLATVDYGTATAPI---------YMAVEEG-----IPVHVYVDETR 199
Query: 62 DKSTGLLIDAWGKNKFYMPHGCTVDNKG 89
++ G + AW + +PH VDN G
Sbjct: 200 PRNQGAYLTAWEMSSHGVPHTLIVDNAG 227
>sp|A5FUV7|MTNA_ACICJ Methylthioribose-1-phosphate isomerase OS=Acidiphilium cryptum
(strain JF-5) GN=mtnA PE=3 SV=1
Length = 367
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 16/82 (19%)
Query: 9 ITFCDSIGYVARVD-GTSMQPVCPSTYMDTLYCSIEESESGTKRPISVDTVLTLDKSTGL 67
+T C++ G++A VD GT++ P+ YM ++G + VD T ++ G
Sbjct: 159 LTHCNA-GWIATVDWGTALAPI----YM--------AHDAGIDVHVLVDE--TRPRNQGF 203
Query: 68 LIDAWGKNKFYMPHGCTVDNKG 89
+ AW K +PH VDN G
Sbjct: 204 SLTAWELGKHGVPHTVIVDNAG 225
>sp|B4DX44|ZN736_HUMAN Zinc finger protein 736 OS=Homo sapiens GN=ZNF736 PE=2 SV=2
Length = 427
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 80 PHGCTVDNKGFIWLTDVALHQVFKT---PYTYN 109
P+ C NK + W +D+A H++ T PYT N
Sbjct: 284 PYKCEECNKAYRWFSDLAKHKIIHTGDKPYTCN 316
>sp|Q2I6J1|SHP2A_DANRE Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2A OS=Danio
rerio GN=inppl1a PE=2 SV=2
Length = 1266
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 21 VDGTSMQPVCPSTYMDTLYCSIEESESGTKRPISVDTV 58
V GT VC +++TL CS++E +PI+V T+
Sbjct: 452 VFGTQENSVCDKEWVETLRCSLKEYTDMEYKPIAVQTL 489
>sp|Q6NG14|DNAJ1_CORDI Chaperone protein DnaJ 1 OS=Corynebacterium diphtheriae (strain
ATCC 700971 / NCTC 13129 / Biotype gravis) GN=dnaJ1 PE=3
SV=1
Length = 375
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 26 MQPVCPSTYMDTLYCSIEESESGTKRPISVDTVLTLDKSTG 66
+QP + TL ++EE+ GTK+PI++DT + D+ G
Sbjct: 107 VQPGSDALLRTTL--TLEEAYLGTKKPITIDTAILCDRCEG 145
>sp|Q96QP1|ALPK1_HUMAN Alpha-protein kinase 1 OS=Homo sapiens GN=ALPK1 PE=2 SV=3
Length = 1244
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 84 TVDNKGFIWLTDVALHQVFKTPYTYNFG 111
T + KG I+LTD +H V + +T NFG
Sbjct: 1183 TGNGKGLIYLTDPQIHSVDQKVFTTNFG 1210
>sp|B9KQ55|MTNA_RHOSK Methylthioribose-1-phosphate isomerase OS=Rhodobacter sphaeroides
(strain KD131 / KCTC 12085) GN=mtnA PE=3 SV=1
Length = 364
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 16/82 (19%)
Query: 9 ITFCDSIGYVARVD-GTSMQPVCPSTYMDTLYCSIEESESGTKRPISVDTVLTLDKSTGL 67
+T C++ G++A VD GT+ P+ Y ++E +G + VD T ++ G
Sbjct: 157 LTHCNA-GWLATVDWGTATSPI---------YHALE---AGIDVHVFVDE--TRPRNQGA 201
Query: 68 LIDAWGKNKFYMPHGCTVDNKG 89
L+ AW N + H VDN G
Sbjct: 202 LLTAWEMNSHGVSHDLIVDNAG 223
>sp|B7JYN0|GLMM_CYAP8 Phosphoglucosamine mutase OS=Cyanothece sp. (strain PCC 8801)
GN=glmM PE=3 SV=1
Length = 485
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 16/86 (18%)
Query: 20 RVDGTSMQPVCPSTYMDTLYCSIEESES--GTKRPISVDTVLTLDKSTGLLIDA------ 71
R DG + C ST++D L +I+E ++ G D V+ +D S G ++D
Sbjct: 240 RPDGNRINVNCGSTHLDLLQQAIKEHQADLGFAFDGDADRVMAVD-SQGRVVDGDYILYL 298
Query: 72 WGKN---KFYMPH----GCTVDNKGF 90
WGK+ + +PH G + N GF
Sbjct: 299 WGKHLLEQGKLPHNLLIGTVMANLGF 324
>sp|Q5FQK0|MTNA_GLUOX Methylthioribose-1-phosphate isomerase OS=Gluconobacter oxydans
(strain 621H) GN=mtnA PE=3 SV=1
Length = 368
Score = 29.3 bits (64), Expect = 6.9, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 16/82 (19%)
Query: 9 ITFCDSIGYVARVD-GTSMQPVCPSTYMDTLYCSIEESESGTKRPISVDTVLTLDKSTGL 67
+T C++ G++A VD GT++ P+ YM + G + VD T ++ G
Sbjct: 162 LTHCNA-GWIATVDWGTALAPI----YM--------AHDEGIPVHVWVDE--TRPRNQGS 206
Query: 68 LIDAWGKNKFYMPHGCTVDNKG 89
L+ AW +PH DN G
Sbjct: 207 LLTAWELGSHGVPHTVIADNAG 228
>sp|P35524|CLCN1_RAT Chloride channel protein 1 OS=Rattus norvegicus GN=Clcn1 PE=2 SV=1
Length = 994
Score = 29.3 bits (64), Expect = 7.2, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 32 STYMDTLYCSIEESESGTKRPISVDTVLTLDKSTGLLIDAWGKNKFYMP---HGCTVDNK 88
S + L+C + ++ S TK+ I+ D+ +D + I+AW + + P C +D
Sbjct: 772 SIFQRLLHCLLGKAHS-TKKKITQDSTDLVDNMSPEEIEAWEREQLSQPVCFDFCCIDQS 830
Query: 89 GFIWLTDVALHQ 100
F + LH+
Sbjct: 831 PFQLVEQTTLHK 842
>sp|Q5JS37|NHLC3_HUMAN NHL repeat-containing protein 3 OS=Homo sapiens GN=NHLRC3 PE=2 SV=1
Length = 347
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 73 GKNKFYMPHGCTVDNKGFIWLTD 95
G KF +PH T+D+ G +W+ D
Sbjct: 209 GPAKFNIPHSVTLDSAGRVWVAD 231
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,673,802
Number of Sequences: 539616
Number of extensions: 1741940
Number of successful extensions: 3850
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 3830
Number of HSP's gapped (non-prelim): 32
length of query: 115
length of database: 191,569,459
effective HSP length: 83
effective length of query: 32
effective length of database: 146,781,331
effective search space: 4697002592
effective search space used: 4697002592
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)