RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy15755
(516 letters)
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450. Cytochrome P450s are
haem-thiolate proteins involved in the oxidative
degradation of various compounds. They are particularly
well known for their role in the degradation of
environmental toxins and mutagens. They can be divided
into 4 classes, according to the method by which
electrons from NAD(P)H are delivered to the catalytic
site. Sequence conservation is relatively low within the
family - there are only 3 absolutely conserved residues
- but their general topography and structural fold are
highly conserved. The conserved core is composed of a
coil termed the 'meander', a four-helix bundle, helices
J and K, and two sets of beta-sheets. These constitute
the haem-binding loop (with an absolutely conserved
cysteine that serves as the 5th ligand for the haem
iron), the proton-transfer groove and the absolutely
conserved EXXR motif in helix K. While prokaryotic P450s
are soluble proteins, most eukaryotic P450s are
associated with microsomal membranes. their general
enzymatic function is to catalyze regiospecific and
stereospecific oxidation of non-activated hydrocarbons
at physiological temperatures.
Length = 461
Score = 240 bits (615), Expect = 1e-73
Identities = 147/509 (28%), Positives = 223/509 (43%), Gaps = 76/509 (14%)
Query: 9 PPGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVASDEKSIR 68
PPGP P +G+ L + H K+ + Y I YLGP P VV S ++++
Sbjct: 1 PPGPPPL-PLFGNLL--QLGRKGNLHSVFTKLQKKY-GPIFRLYLGPKPVVVLSGPEAVK 56
Query: 69 ELLMK--PQFQGRIDQVVSLVRVDFGEERGIIFTEGDLWQQQKRFFLRHLRDHGFGKRS- 125
E+L+K +F GR D+ +GI+F G W+Q +RF FGK S
Sbjct: 57 EVLIKKGEEFSGRPDEPWFATSRGPFLGKGIVFANGPRWRQLRRFLTPTF--TSFGKLSF 114
Query: 126 EPLEVQLAAEIQDLITFLREERNHPAYQNGLALIPSIFAWGNIALLMSALTGEKFTGREG 185
EP + E +DL+ LR+ P + I
Sbjct: 115 EPR---VEEEARDLVEKLRKTAGEPGVID-------ITDL-------------------- 144
Query: 186 KDTLSDIHWNALNFQFYTEPLAGTLTF-VPFAKYL-PPFFGYMKDITRLNDNLANYAKFY 243
+ ++ F F P F +K + L+ L++
Sbjct: 145 -------------LFRAALNVICSILFGERFGSLEDPKFLELVKAVQELSSLLSS----- 186
Query: 244 TEPLAGTLTFVPFAKYLP-PFFGYMKDITRLNDNLANYAKNSIRKKMDSFNEDTINSAVD 302
P L P KY P P +K + +L + R+ +DS + + +D
Sbjct: 187 --PSPQLLDLFPILKYFPGPHGRKLKRARKKIKDLLDKLIEERRETLDS-AKKSPRDFLD 243
Query: 303 AYIKMMKEAQADGDRETYFTEEQLKLVIQDFTFPA----SNTISGQLGFLWQQFLLHPEV 358
A + +E + T+E+L+ + + F S+T+S L L HPEV
Sbjct: 244 ALLLAKEEE-----DGSKLTDEELRATVLELFFAGTDTTSSTLSWALYEL----AKHPEV 294
Query: 359 QTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGY 418
Q K++EE+D V+G P + + Y +A I+E +R +VPL +P + T+D GY
Sbjct: 295 QEKLREEIDEVIGDKRSPTYDDLQNMPYLDAVIKETLRLHPVVPLLLPREVTKDTVIPGY 354
Query: 419 HVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGET 478
+ KGT+++ +LY LH DP+++ +PE F PERFLD NG+ +K LPFG G R C GE
Sbjct: 355 LIPKGTLVIVNLYALHRDPEVFPNPEEFDPERFLDENGKFRKSFAFLPFGAGPRNCLGER 414
Query: 479 FARQNMFMYVAGLLQNFTFSLPEGAKLPD 507
AR M +++A LLQNF LP G PD
Sbjct: 415 LARMEMKLFLATLLQNFEVELPPGTDPPD 443
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional.
Length = 514
Score = 136 bits (345), Expect = 8e-35
Identities = 125/532 (23%), Positives = 207/532 (38%), Gaps = 101/532 (18%)
Query: 2 FSRPKHFPPGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVA 61
+ PPGP W P G+ L + H+ LA +C+ Y ++ LG +
Sbjct: 27 MRKSLRLPPGPPRW-PIVGNLLQL----GPLPHRDLASLCKKY-GPLVYLRLGSVDAITT 80
Query: 62 SDEKSIRELLMKPQ--FQGRIDQVVSLVRVDFGEERGIIFTEGDLWQQQKRFFLRHLRDH 119
D + IRE+L++ F R + ++ V + +G + G W++ +R + HL
Sbjct: 81 DDPELIREILLRQDDVFASR-PRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTT 139
Query: 120 GFGKRSEPLEVQLAAEIQDLITFLREERNHPAYQNGLAL-IPSIFAWGNIALLMSALTGE 178
KR E A E + LI + E A Q G + + + ++ + L G+
Sbjct: 140 ---KRLESFAKHRAEEARHLIQDVWE-----AAQTGKPVNLREVLGAFSMNNVTRMLLGK 191
Query: 179 KFTGREGKDTLSDIHWNALNFQFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLAN 238
++ G E S A+ F T L L + Y+ D
Sbjct: 192 QYFGAE-----SAGPKEAMEFMHITHELFRLLGVI-----------YLGD---------- 225
Query: 239 YAKFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLANYAKNSIRKKMDSFNEDTIN 298
++P ++L P+ G K + + K++D F++ I+
Sbjct: 226 --------------YLPAWRWLDPY-GCEKKMREV------------EKRVDEFHDKIID 258
Query: 299 SAVDAYIKMMKEAQADGD------------RETYFTEEQLKLVIQDFTFPASNTISGQLG 346
A D D + + + ++K ++QD A++T +
Sbjct: 259 EHRRAR-SGKLPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNE 317
Query: 347 FLWQQFLLHPEVQTKIQEELDRVVGR------SELPNLNHRAELHYTEATIREIMRYKTL 400
+ + + +P V KIQEELD VVGR S+L +LN Y +RE R
Sbjct: 318 WAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLN------YLRCVVRETFRMHPA 371
Query: 401 VPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNG---- 456
P +PH++ GY++ T + + + L + IW D E FRPER + G
Sbjct: 372 GPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVE 431
Query: 457 QLKKKD-RTLPFGFGKRLCPGETFARQNMFMYVAGLLQNFTFSLPEGAKLPD 507
D + LPF GKR CPG + M +A L F +S P+G + D
Sbjct: 432 ISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPED 483
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase.
Length = 517
Score = 134 bits (340), Expect = 3e-34
Identities = 82/278 (29%), Positives = 135/278 (48%), Gaps = 15/278 (5%)
Query: 247 LAGTLT---FVPFAKYLPP--FFGYMKDITRLNDNLANYAKNSIRKKMDSFNEDTINSAV 301
LAG FVP ++L G MK + R D + N K + +
Sbjct: 216 LAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEE-HKAAGQTGSEEHKDLL 274
Query: 302 DAYIKMMKEAQADGDRETYFTEEQLKLVIQDFTFPASNTISGQLGFLWQQFLLHPEVQTK 361
+ + +E QADG+ T+ ++K ++ + ++T S + + + + HP++ K
Sbjct: 275 STLLALKREQQADGE-GGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKK 333
Query: 362 IQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVE 421
QEELD VVGR L + + +L Y +A I+E R PLS+P A E+ GYH+
Sbjct: 334 AQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIP 393
Query: 422 KGTIMVPSLYCLHNDPDIWGDPENFRPERFL----DSNGQLKKKDRTL-PFGFGKRLCPG 476
KG ++ +++ + DP+ W DP FRP+RFL + +K D L PFG G+R+C G
Sbjct: 394 KGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAG 453
Query: 477 ETFARQNMFMYVAGLLQNFTFSLPEGA---KLPDDSKY 511
++ + + + A L+ F + L +G KL + Y
Sbjct: 454 LSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAY 491
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase.
Length = 503
Score = 123 bits (311), Expect = 2e-30
Identities = 83/276 (30%), Positives = 135/276 (48%), Gaps = 39/276 (14%)
Query: 253 FVPFAKYLPPFF-GYMKDITRLNDN-LANYAKNSI--RKKMDSFNE---DTINSAVDAYI 305
F+P L PF GY+K + + LA + + RKK+ S + + A+D +
Sbjct: 225 FIPI---LRPFLRGYLKICQDVKERRLALFKDYFVDERKKLMSAKGMDKEGLKCAIDHIL 281
Query: 306 KMMKEAQADGDRETYFTEEQLKLVIQDFTFPASNTISGQLGFLWQ------QFLLHPEVQ 359
EAQ G+ E+ + ++++ A T LW + + HPE+Q
Sbjct: 282 ----EAQKKGE----INEDNVLYIVENINVAAIETT------LWSIEWGIAELVNHPEIQ 327
Query: 360 TKIQEELDRVVGRSEL---PNLNHRAELHYTEATIREIMRYKTLVPLSVPHKATEDANFM 416
K+++ELD V+G P+ + +L Y +A ++E +R +PL VPH EDA
Sbjct: 328 KKLRDELDTVLGPGNQVTEPDTH---KLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLG 384
Query: 417 GYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKD---RTLPFGFGKRL 473
GY + + ++ + + L N+P++W +PE FRPERFL+ +++ R LPFG G+R
Sbjct: 385 GYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRS 444
Query: 474 CPGETFARQNMFMYVAGLLQNFTFSLPEGAKLPDDS 509
CPG A + + + L+QNF P G D S
Sbjct: 445 CPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVS 480
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase.
Length = 466
Score = 112 bits (281), Expect = 1e-26
Identities = 63/218 (28%), Positives = 97/218 (44%), Gaps = 16/218 (7%)
Query: 298 NSAVDAYIKMMKEAQADG-----------DRETYFTEEQLKLVIQDFTFPASNTISGQLG 346
+ + A IK K+ A G T+ T+EQL +++ + A++T +
Sbjct: 224 TAVMKALIKQQKKRIARGEERDCYLDFLLSEATHLTDEQLMMLVWEPIIEAADTT--LVT 281
Query: 347 FLWQQFLL--HPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLS 404
W + L +P+ Q ++ E+ V G E L Y A E +R + VPL
Sbjct: 282 TEWAMYELAKNPDKQERLYREIREVCG-DERVTEEDLPNLPYLNAVFHETLRKYSPVPLL 340
Query: 405 VPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRT 464
P ED GY + GT + ++Y + D W +PE + PERFL + +T
Sbjct: 341 PPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYESADMYKT 400
Query: 465 LPFGFGKRLCPGETFARQNMFMYVAGLLQNFTFSLPEG 502
+ FG GKR+C G A M +A L+Q F + L EG
Sbjct: 401 MAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREG 438
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional.
Length = 499
Score = 111 bits (278), Expect = 4e-26
Identities = 77/282 (27%), Positives = 137/282 (48%), Gaps = 23/282 (8%)
Query: 242 FYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLANYAKNSIRKKMDSFNEDTINSAV 301
+ T+ L GTL F L P+FG++ ++T L+ L K++D++ ++ ++ +
Sbjct: 205 YETQALLGTLFFSD----LFPYFGFLDNLTGLSARL-----KKAFKELDTYLQELLDETL 255
Query: 302 D---------AYIKMMKEAQADGDRETYFTEEQLKLVIQDFTFPASNTISGQLGFLWQQF 352
D ++I ++ + D FT E +K +I D P ++T + + +
Sbjct: 256 DPNRPKQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYL 315
Query: 353 LLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHKATED 412
+ +PE K Q+E+ V+G + L Y +A I+E +R + ++P+ + + D
Sbjct: 316 IKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIAD 375
Query: 413 ANFMGYHVEKGTIMVPSLYCLHNDPDIWGD-PENFRPERFLDSNGQLKKKDRT---LPFG 468
A GY + TI+ + + + D WGD P F PERF+ + + K + LPFG
Sbjct: 376 AKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFG 435
Query: 469 FGKRLCPGETFARQNMFMYVAGLLQNFTFSLPEGAKLPDDSK 510
G+R+CP + + A LL F +SLP+G K P+D K
Sbjct: 436 SGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIK-PEDIK 476
>gnl|CDD|166612 PLN02971, PLN02971, tryptophan N-hydroxylase.
Length = 543
Score = 109 bits (274), Expect = 2e-25
Identities = 68/230 (29%), Positives = 107/230 (46%), Gaps = 21/230 (9%)
Query: 289 MDSFNEDTINSAVDAYIKMMKEAQ--------------ADGDRETYFTEEQLKLVIQDFT 334
MD +++ I D IKM +E + D + T +++K I++
Sbjct: 281 MDKYHDPII----DERIKMWREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELV 336
Query: 335 FPASNTISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREI 394
A + S + + + + PE+ K EE+DRVVG+ + +L+Y +A IRE
Sbjct: 337 MAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREA 396
Query: 395 MRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLD- 453
R + ++PH A D GYH+ KG+ ++ S Y L +P +W DP +F+PER L+
Sbjct: 397 FRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNE 456
Query: 454 -SNGQLKKKD-RTLPFGFGKRLCPGETFARQNMFMYVAGLLQNFTFSLPE 501
S L + D R + F GKR C M +A LLQ F + L
Sbjct: 457 CSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAG 506
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase.
Length = 516
Score = 109 bits (273), Expect = 2e-25
Identities = 68/249 (27%), Positives = 120/249 (48%), Gaps = 18/249 (7%)
Query: 265 GYMKDITRLNDNLANYAKNSIRKKMDSFNEDTINSAVDAYIKMMKEAQADGDRETY-FTE 323
G++ DI ++D++ + + D ++ + Y + K ++D + + T
Sbjct: 245 GFIDDI--IDDHIQKRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTR 302
Query: 324 EQLKLVIQDFTFPASNTISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAE 383
+ +K +I D F + T++ + + + + PE ++Q+EL VVG LN R E
Sbjct: 303 DNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVG------LNRRVE 356
Query: 384 ------LHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDP 437
L Y + T++E +R +PL + H+ EDA GY + K + ++ + + + D
Sbjct: 357 ESDLEKLTYLKCTLKETLRLHPPIPLLL-HETAEDAEVAGYFIPKRSRVMINAWAIGRDK 415
Query: 438 DIWGDPENFRPERFLDSNG-QLKKKD-RTLPFGFGKRLCPGETFARQNMFMYVAGLLQNF 495
+ W DP+ F+P RFL K +PFG G+R CPG + + VA LL F
Sbjct: 416 NSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCF 475
Query: 496 TFSLPEGAK 504
T+ LP+G K
Sbjct: 476 TWELPDGMK 484
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis,
transport, and catabolism].
Length = 411
Score = 105 bits (264), Expect = 1e-24
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 28/202 (13%)
Query: 305 IKMMKEAQADGDRETYFTEEQLKLVIQDFTFPASNTISGQLGFLWQQFLLHPEVQTKIQE 364
+ ++ A+ DG ++++++ + T + L + L HP+ K++
Sbjct: 218 LSLLLSAEDDGGGR--LSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRA 275
Query: 365 ELDRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGT 424
E DR EA + E +R VPL+ ATED GY + GT
Sbjct: 276 EPDRP----------------LLEAVVEETLRLYPPVPLA-RRVATEDVELGGYRIPAGT 318
Query: 425 IMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFARQNM 484
+++ S+ + DP+++ DP+ F PERF +++ LPFG G C G AR +
Sbjct: 319 VVLLSIGAANRDPEVFPDPDEFDPERFNNAH---------LPFGGGPHRCLGAALARLEL 369
Query: 485 FMYVAGLLQNFTFSLPEGAKLP 506
+ +A LL+ F L
Sbjct: 370 KVALAELLRRFPLLLLAEPPPL 391
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1.
Length = 502
Score = 102 bits (254), Expect = 4e-23
Identities = 74/278 (26%), Positives = 129/278 (46%), Gaps = 23/278 (8%)
Query: 244 TEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLANYAKNSIRKKMDSFNEDTINSAVD- 302
T+ + G + F F P+ G++ D++ L Y K ++ D++ ++ +N +D
Sbjct: 208 TQSVLGKIFFSDFF----PYCGFLDDLS----GLTAYMKECFERQ-DTYIQEVVNETLDP 258
Query: 303 --------AYIKMMKEAQADGDRETYFTEEQLKLVIQDFTFPASNTISGQLGFLWQQFLL 354
+ I ++ E + + FT + +K VI D ++T + + + +
Sbjct: 259 KRVKPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMK 318
Query: 355 HPEVQTKIQEELDRVVGRSELPNLNHR--AELHYTEATIREIMRYKTLVPLSVPHKATED 412
+P+V K Q E+ + + L Y A ++E +R + ++PL +P +D
Sbjct: 319 YPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQD 378
Query: 413 ANFMGYHVEKGTIMVPSLYCLHNDPDIWG-DPENFRPERFLDSNGQLKKKD-RTLPFGFG 470
GY + GT + + + + D WG +P+ FRPERFL+ K D +PFG G
Sbjct: 379 TKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSG 438
Query: 471 KRLCPGETFARQNMFMYVAGLLQNFTFSLPEGAKLPDD 508
+R+CPG + + A LL NF F LP G K PDD
Sbjct: 439 RRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMK-PDD 475
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional.
Length = 482
Score = 100 bits (252), Expect = 9e-23
Identities = 57/257 (22%), Positives = 108/257 (42%), Gaps = 14/257 (5%)
Query: 261 PPFFGYMKDITRLNDNLANYAKNSIRKKMDSFNEDTINSAVDAYIKMMKEAQADGDRETY 320
P ++ Y++ + + + K + + + + + +D IK +
Sbjct: 226 PLYYQYLEHTDKNFKKIKKFIKEKYHEHLKTIDPEVPRDLLDLLIK----EYGTNTDDDI 281
Query: 321 FTEEQLKLVIQDFTFPASNTISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNH 380
+ I DF +T + L ++ +PE+Q K E+ V L+
Sbjct: 282 LSILA---TILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSD 338
Query: 381 RAELHYTEATIREIMRYKTLVPLSVPHKATEDANFM-GYHVEKGTIMVPSLYCLHNDPDI 439
R YT A I+E +RYK + P +P + D G+ + K ++ + Y L +
Sbjct: 339 RQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKY 398
Query: 440 WGDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFARQNMFMYVAGLLQNFTFSL 499
+ +PE F P RFL+ + D +PF G R C G+ FA+ +++ + ++ NF
Sbjct: 399 FENPEQFDPSRFLNPD----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKS 454
Query: 500 PEGAKLPDDSKYIPGLN 516
+G K+ + +Y GL
Sbjct: 455 IDGKKIDETEEY--GLT 469
Score = 32.4 bits (74), Expect = 0.66
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 33 THKALAKMCRIYKSKILGFYLGPFPTVVASDEKSIRELLMKPQFQGRIDQVVSLVRVDFG 92
H+ L KM + Y I + TVV SD IRE+ + F D+ + + G
Sbjct: 50 PHRDLTKMSKKY-GGIFRIWFADLYTVVLSDPILIREMFVD-NFDNFSDR-PKIPSIKHG 106
Query: 93 EE-RGIIFTEGDLWQQQKRFFLRHLR 117
GI+ + G+ W++ + + +R
Sbjct: 107 TFYHGIVTSSGEYWKRNREIVGKAMR 132
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H);
Provisional.
Length = 504
Score = 99.5 bits (248), Expect = 3e-22
Identities = 55/211 (26%), Positives = 108/211 (51%), Gaps = 7/211 (3%)
Query: 305 IKMMKEAQADGDRETYFTEEQLKLVIQDFTFPASNTISGQLGFLWQQFLLHPEVQTKIQE 364
+ M + + G++ T +K ++ + ++T S + + + L +P + + E
Sbjct: 272 VVMANQENSTGEK---LTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHE 328
Query: 365 ELDRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGT 424
E+D+V+GR+ + +L Y +A +E R PL++P +T+ GY++ K T
Sbjct: 329 EMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNT 388
Query: 425 IMVPSLYCLHNDPDIWGDPENFRPERFL-DSNGQLKKKD---RTLPFGFGKRLCPGETFA 480
+ +++ + DPD+W +PE FRPERFL + N ++ + +PFG G+R+C G
Sbjct: 389 RLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMG 448
Query: 481 RQNMFMYVAGLLQNFTFSLPEGAKLPDDSKY 511
+ + L+ +F + LP+G +L D +
Sbjct: 449 IVLVEYILGTLVHSFDWKLPDGVELNMDEAF 479
>gnl|CDD|178524 PLN02936, PLN02936, epsilon-ring hydroxylase.
Length = 489
Score = 84.8 bits (210), Expect = 2e-17
Identities = 53/162 (32%), Positives = 71/162 (43%), Gaps = 6/162 (3%)
Query: 349 WQQFLL--HPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVP 406
W +LL +PE K QEELDRV+ P EL Y I E MR P+ +
Sbjct: 300 WTLYLLSKNPEALRKAQEELDRVLQ-GRPPTYEDIKELKYLTRCINESMRLYPHPPVLIR 358
Query: 407 HKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKD---R 463
ED GY V G ++ S+Y +H P++W E F PERF + + R
Sbjct: 359 RAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFR 418
Query: 464 TLPFGFGKRLCPGETFARQNMFMYVAGLLQNFTFSLPEGAKL 505
+PF G R C G+ FA + +A LLQ L +
Sbjct: 419 YIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDI 460
>gnl|CDD|215393 PLN02738, PLN02738, carotene beta-ring hydroxylase.
Length = 633
Score = 83.8 bits (207), Expect = 4e-17
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 7/160 (4%)
Query: 349 WQQFLL--HPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVP 406
W +LL P V K+QEE+D V+G P + +L YT I E +R P+ +
Sbjct: 413 WTFYLLSKEPSVVAKLQEEVDSVLG-DRFPTIEDMKKLKYTTRVINESLRLYPQPPVLI- 470
Query: 407 HKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERF-LD--SNGQLKKKDR 463
++ E+ GY +++G + S++ LH P W D E F PER+ LD + + +
Sbjct: 471 RRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFS 530
Query: 464 TLPFGFGKRLCPGETFARQNMFMYVAGLLQNFTFSLPEGA 503
LPFG G R C G+ FA + A L++ F F L GA
Sbjct: 531 YLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGA 570
>gnl|CDD|215164 PLN02290, PLN02290, cytokinin trans-hydroxylase.
Length = 516
Score = 83.3 bits (206), Expect = 6e-17
Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 22/257 (8%)
Query: 254 VPFAKYLPPFFGYMKDITRLNDNLANYAKNSIRKKMDSFNEDTINSAVDAYIKMMKEAQA 313
P +++ P Y ++I L + I+ + D +S D + M+ +
Sbjct: 246 FPGSRFFPS--KYNREIKSLKGEVERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLL-NEM 302
Query: 314 DGDRETYFTEEQLKLVIQD---FTFPASNTISGQLGFLWQQFLL--HPEVQTKIQEELDR 368
+ R F L+L++ + F F T + L W LL +P Q K++ E+
Sbjct: 303 EKKRSNGFNLN-LQLIMDECKTFFFAGHETTA--LLLTWTLMLLASNPTWQDKVRAEVAE 359
Query: 369 VVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLS--VPHKATEDANFMGYHVEKG-TI 425
V G E P+++H ++L I E +R L P + +P A ED H+ KG +I
Sbjct: 360 VCGG-ETPSVDHLSKLTLLNMVINESLR---LYPPATLLPRMAFEDIKLGDLHIPKGLSI 415
Query: 426 MVPSLYCLHNDPDIWG-DPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFARQNM 484
+P L +H+ ++WG D F P+RF + +PF G R C G+ FA
Sbjct: 416 WIPVL-AIHHSEELWGKDANEFNPDRF--AGRPFAPGRHFIPFAAGPRNCIGQAFAMMEA 472
Query: 485 FMYVAGLLQNFTFSLPE 501
+ +A L+ F+F++ +
Sbjct: 473 KIILAMLISKFSFTISD 489
>gnl|CDD|178592 PLN03018, PLN03018, homomethionine N-hydroxylase.
Length = 534
Score = 80.1 bits (197), Expect = 7e-16
Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 8/242 (3%)
Query: 268 KDITRLNDNLA-NYAKNSIRKKMDSFNEDTINSAVDAYIKMMKEAQADGDRETYFTEEQL 326
++ ++N NL +Y I ++++ + E +AV+ ++ + D + + T +++
Sbjct: 257 EERAKVNVNLVRSYNNPIIDERVELWREKGGKAAVEDWLDTFITLK-DQNGKYLVTPDEI 315
Query: 327 KLVIQDFTFPASNTISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHY 386
K +F A + + + + + L +PE+ K +ELD VVG+ L + L+Y
Sbjct: 316 KAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNY 375
Query: 387 TEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENF 446
+A RE R PH A +D GY + KG+ + L +P IW DP +
Sbjct: 376 LKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVY 435
Query: 447 RPERFLDSNGQLKK------KDRTLPFGFGKRLCPGETFARQNMFMYVAGLLQNFTFSLP 500
PER L +G K+ + R + F G+R C G M M +A LQ F + L
Sbjct: 436 EPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLH 495
Query: 501 EG 502
+
Sbjct: 496 QD 497
>gnl|CDD|215235 PLN02426, PLN02426, cytochrome P450, family 94, subfamily C
protein.
Length = 502
Score = 73.2 bits (180), Expect = 1e-13
Identities = 57/184 (30%), Positives = 82/184 (44%), Gaps = 20/184 (10%)
Query: 342 SGQLGFLWQQFLL--HPEVQTKIQEELDRVVGRS-ELPNLNHRAELHYTEATIREIMRYK 398
S F W LL HPEV + I+EE DRV+G + E + E+HY A + E MR
Sbjct: 311 SALTSFFW---LLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLF 367
Query: 399 TLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWG-DPENFRPERFLDSNGQ 457
V A +D G V KGT + Y + IWG D F+PER+L NG
Sbjct: 368 PPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLK-NGV 426
Query: 458 LKKKDRTLPFGF-----GKRLCPGETFARQNMFMYVAGLLQNFTFSLPEGA-KLPDDSKY 511
++ PF + G R+C G+ A M +++ F + + + P ++
Sbjct: 427 FVPEN---PFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAP---RF 480
Query: 512 IPGL 515
PGL
Sbjct: 481 APGL 484
>gnl|CDD|215171 PLN02302, PLN02302, ent-kaurenoic acid oxidase.
Length = 490
Score = 70.9 bits (174), Expect = 4e-13
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 12/155 (7%)
Query: 348 LWQQFLL--HPEVQTKIQEELDRVV-----GRSELPNLNHRAELHYTEATIREIMRYKTL 400
+W L HPEV K + E + + G+ L L ++ Y I E +R +
Sbjct: 308 MWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGL-TLKDVRKMEYLSQVIDETLRLINI 366
Query: 401 VPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKK 460
V +A D GY + KG ++ +H DP+++ +P+ F P R+ + K
Sbjct: 367 SLT-VFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRW---DNYTPK 422
Query: 461 KDRTLPFGFGKRLCPGETFARQNMFMYVAGLLQNF 495
LPFG G RLCPG A+ + +++ L +
Sbjct: 423 AGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGY 457
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional.
Length = 519
Score = 70.4 bits (172), Expect = 7e-13
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 21/196 (10%)
Query: 313 ADGDRETYFTEEQLKLVIQDFTFPASNTISGQLGFLWQQFLLHPEVQTKIQEELDRVVGR 372
DGDR T++++ + +F ++T S L ++ + + +P +Q+K+ +E+ G
Sbjct: 296 EDGDRA--LTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGD 353
Query: 373 SELPNLNHRAE-----LHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMV 427
+ +E + Y +A + E +R +PHKA ED GY + KG +
Sbjct: 354 DQ----EEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVN 409
Query: 428 PSLYCLHNDPDIWGDPENFRPERFL--------DSNGQLKKKDRTLPFGFGKRLCPGETF 479
+ + D W P F PERFL D G ++ R +PFG G+R+C G
Sbjct: 410 FMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGS--REIRMMPFGVGRRICAGLGI 467
Query: 480 ARQNMFMYVAGLLQNF 495
A ++ +VA +++ F
Sbjct: 468 AMLHLEYFVANMVREF 483
>gnl|CDD|215627 PLN03195, PLN03195, fatty acid omega-hydroxylase; Provisional.
Length = 516
Score = 69.0 bits (169), Expect = 2e-12
Identities = 51/209 (24%), Positives = 84/209 (40%), Gaps = 22/209 (10%)
Query: 316 DRETYFTEEQLKLVIQDFTFPASNTISGQLGFLWQQFLLHPEVQTKIQEEL--------- 366
D ++ FT++ L+ ++ +F +T + L + +++P V K+ EL
Sbjct: 283 DPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAK 342
Query: 367 -----------DRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHKATEDANF 415
RV + L + +L Y A I E +R VP +D
Sbjct: 343 EEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLP 402
Query: 416 MGYHVEKGTIMVPSLYCLHNDPDIWG-DPENFRPERFL-DSNGQLKKKDRTLPFGFGKRL 473
G V+ G ++ Y + WG D +F+PER++ D Q + F G R+
Sbjct: 403 DGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRI 462
Query: 474 CPGETFARQNMFMYVAGLLQNFTFSLPEG 502
C G+ A M M +A L + F F L G
Sbjct: 463 CLGKDSAYLQMKMALALLCRFFKFQLVPG 491
>gnl|CDD|177847 PLN02196, PLN02196, abscisic acid 8'-hydroxylase.
Length = 463
Score = 66.9 bits (163), Expect = 9e-12
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 11/189 (5%)
Query: 315 GDRETYFTEEQLKLVIQDFTFPASNTISGQLGFLWQQFLLHPEVQ---TKIQEELDRVVG 371
GD+E T+EQ+ I F A +T + L ++ + +P V T+ Q + +
Sbjct: 255 GDKEG-LTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKE 313
Query: 372 RSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLY 431
E ++ T I+E +R +++ + +A ED + GY + KG ++P
Sbjct: 314 EGESLTWEDTKKMPLTSRVIQETLRVASILSFTF-REAVEDVEYEGYLIPKGWKVLPLFR 372
Query: 432 CLHNDPDIWGDPENFRPERFLDSNGQLKKKDRT-LPFGFGKRLCPGETFARQNMFMYVAG 490
+H+ DI+ DP F P RF ++ K T +PFG G CPG A+ + + +
Sbjct: 373 NIHHSADIFSDPGKFDPSRF-----EVAPKPNTFMPFGNGTHSCPGNELAKLEISVLIHH 427
Query: 491 LLQNFTFSL 499
L + +S+
Sbjct: 428 LTTKYRWSI 436
>gnl|CDD|177826 PLN02169, PLN02169, fatty acid (omega-1)-hydroxylase/midchain
alkane hydroxylase.
Length = 500
Score = 66.2 bits (161), Expect = 2e-11
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 9/180 (5%)
Query: 329 VIQDFTFPASNTISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTE 388
VI +T S L + + HP+V KI+ E++ +L +L Y
Sbjct: 305 VIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKFDNEDL------EKLVYLH 358
Query: 389 ATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWG-DPENFR 447
A + E MR +P + A D G+ V+ + +V +Y L +WG D +F+
Sbjct: 359 AALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFK 418
Query: 448 PERFLDSNGQLKKKD--RTLPFGFGKRLCPGETFARQNMFMYVAGLLQNFTFSLPEGAKL 505
PER++ NG L+ + + + F G R C G+ A M + +++N+ F + EG K+
Sbjct: 419 PERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKI 478
>gnl|CDD|166628 PLN02987, PLN02987, Cytochrome P450, family 90, subfamily A.
Length = 472
Score = 63.5 bits (154), Expect = 1e-10
Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 4/153 (2%)
Query: 356 PEVQTKIQEELDRVVGRSELPNL---NHRAELHYTEATIREIMRYKTLVPLSVPHKATED 412
P +++EE +++ + + +T+ + E +R ++ + +A D
Sbjct: 298 PLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIG-GIFRRAMTD 356
Query: 413 ANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRTLPFGFGKR 472
GY + KG + S +H D + + D F P R+ ++G + PFG G R
Sbjct: 357 IEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGTTVPSNVFTPFGGGPR 416
Query: 473 LCPGETFARQNMFMYVAGLLQNFTFSLPEGAKL 505
LCPG AR + +++ L+ F++ E KL
Sbjct: 417 LCPGYELARVALSVFLHRLVTRFSWVPAEQDKL 449
>gnl|CDD|215276 PLN02500, PLN02500, cytochrome P450 90B1.
Length = 490
Score = 63.0 bits (153), Expect = 2e-10
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 9/138 (6%)
Query: 371 GRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSL 430
G SEL N ++ +T+ I E +R +V + KA +D + GY + G ++P +
Sbjct: 331 GESEL-NWEDYKKMEFTQCVINETLRLGNVVRF-LHRKALKDVRYKGYDIPSGWKVLPVI 388
Query: 431 YCLHNDPDIWGDPENFRPERFLDSN-------GQLKKKDRTLPFGFGKRLCPGETFARQN 483
+H D ++ P+ F P R+ +N + +PFG G RLC G A+
Sbjct: 389 AAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLE 448
Query: 484 MFMYVAGLLQNFTFSLPE 501
M +++ L+ NF + L E
Sbjct: 449 MAVFIHHLVLNFNWELAE 466
>gnl|CDD|178373 PLN02774, PLN02774, brassinosteroid-6-oxidase.
Length = 463
Score = 54.0 bits (130), Expect = 9e-08
Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 355 HPEVQTKIQEE-LD-RVVGRSELP-NLNHRAELHYTEATIREIMRYKTLVPLSVPHKATE 411
HP+ ++++E L R R E P + N + +T A I E R T+V V K T+
Sbjct: 294 HPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVN-GVLRKTTQ 352
Query: 412 DANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRTLPFGFGK 471
D GY + KG + ++ DP ++ DP F P R+LD + L+ + FG G
Sbjct: 353 DMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKS--LESHNYFFLFGGGT 410
Query: 472 RLCPGE 477
RLCPG+
Sbjct: 411 RLCPGK 416
>gnl|CDD|215600 PLN03141, PLN03141, 3-epi-6-deoxocathasterone 23-monooxygenase;
Provisional.
Length = 452
Score = 48.2 bits (115), Expect = 6e-06
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 384 LHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDP 443
L +T+ I E +R ++ V KA +D GY + KG ++ +H D + + +P
Sbjct: 314 LPFTQNVITETLRMGNII-NGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNP 372
Query: 444 ENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
F P R+ + + PFG G+RLCPG AR
Sbjct: 373 YQFNPWRWQEKDM---NNSSFTPFGGGQRLCPGLDLAR 407
>gnl|CDD|215350 PLN02648, PLN02648, allene oxide synthase.
Length = 480
Score = 33.0 bits (76), Expect = 0.39
Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Query: 356 PEVQTKIQEELDRVVGRSELPNLNHRA--ELHYTEATIREIMRYKTLVPLSVPHKATEDA 413
E+Q ++ EE+ V ++ + A ++ ++ + E +R + VP +A ED
Sbjct: 304 EELQARLAEEVRSAV-KAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYG-RARED- 360
Query: 414 NFM------GYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQ 457
F+ + ++KG ++ + DP ++ PE F P+RF+ G+
Sbjct: 361 -FVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE 409
>gnl|CDD|178269 PLN02664, PLN02664, enoyl-CoA
hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase.
Length = 275
Score = 31.4 bits (71), Expect = 1.0
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 156 LALIPSIFAWGNIALLMSALTGEKFTGREGKD 187
L +PSI +GN L ALTG +F+G E K+
Sbjct: 160 LQRLPSIVGYGNAMEL--ALTGRRFSGSEAKE 189
>gnl|CDD|217401 pfam03169, OPT, OPT oligopeptide transporter protein. The OPT
family of oligopeptide transporters is distinct from the
ABC pfam00005 and PTR pfam00854 transporter families.
OPT transporters were first recognised in fungi (Candida
albicans and Schizosaccharomyces pombe), but this
alignment also includes orthologues from Arabidopsis
thaliana. OPT transporters are thought to have 12-14
transmembrane domains and contain the following motif:
SPYxEVRxxVxxxDDP.
Length = 619
Score = 30.4 bits (69), Expect = 3.0
Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Query: 205 PLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLANYAKF--YTEPLAGTL-TFVPFAKYLP 261
PL V + YLP + D T +D L +YA++ Y L L + FA
Sbjct: 249 PLLYYSGNVWYTAYLPIMSNGLFDNTGTSDGLLDYARYIGYGPMLLSGLYALLFFAAITA 308
Query: 262 PFF 264
Sbjct: 309 TIV 311
>gnl|CDD|234172 TIGR03345, VI_ClpV1, type VI secretion ATPase, ClpV1 family.
Members of this protein family are homologs of ClpB, an
ATPase associated with chaperone-related functions.
These ClpB homologs, designated ClpV1, are a key
component of the bacterial pathogenicity-associated type
VI secretion system [Protein fate, Protein and peptide
secretion and trafficking, Cellular processes,
Pathogenesis].
Length = 852
Score = 30.3 bits (69), Expect = 3.0
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 354 LHPEVQTKIQE-ELDRVVGRSELPNLNHRAELHYTEATIREI 394
L +V I +LDR+ R + NH AEL Y+EA + I
Sbjct: 767 LDDDVLAAIVRLKLDRIARRLKE---NHGAELVYSEALVEHI 805
>gnl|CDD|182694 PRK10746, PRK10746, putative transport protein YifK; Provisional.
Length = 461
Score = 29.8 bits (67), Expect = 3.4
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Query: 202 YTEPLAGTLTFVPFA-KYLPPFFGYM 226
+ EP+ G+ F +A +Y+ PFFGY+
Sbjct: 68 FLEPVTGS--FAVYAHRYMSPFFGYL 91
Score = 29.8 bits (67), Expect = 3.4
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Query: 243 YTEPLAGTLTFVPFA-KYLPPFFGYM 267
+ EP+ G+ F +A +Y+ PFFGY+
Sbjct: 68 FLEPVTGS--FAVYAHRYMSPFFGYL 91
>gnl|CDD|225959 COG3425, PksG, 3-hydroxy-3-methylglutaryl CoA synthase [Lipid
metabolism].
Length = 377
Score = 29.6 bits (67), Expect = 4.4
Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Query: 259 YLPPFFGYMKDITRLNDNLANYAKNSIRKKMDSF---NEDTINSAVDAYIKMMKEAQAD 314
Y+P + ++++ R K + + S +ED + AV+A +K A D
Sbjct: 11 YIPRYRIKLEELARAWGVDPEKIKKGLGVEEKSVPPWDEDAVTMAVEAARNALKRADID 69
>gnl|CDD|227430 COG5099, COG5099, RNA-binding protein of the Puf family,
translational repressor [Translation, ribosomal
structure and biogenesis].
Length = 777
Score = 29.3 bits (66), Expect = 5.8
Identities = 16/104 (15%), Positives = 28/104 (26%), Gaps = 12/104 (11%)
Query: 199 FQFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLANYAKF------YTEPLAGTLT 252
Q T + ++ P+ L PFF Y I +D+ A L
Sbjct: 178 SQPLTNLVVSSIKRFPYLTSLSPFFNY--LIDPSSDSATASADTSPSFNPPPNLSPNNLF 235
Query: 253 FVPFAKYLPPFFGYMKDITRLNDNLANYAKNSIRKKMDSFNEDT 296
LP + + ++ + N + S
Sbjct: 236 STSDLSPLPD----TQSVENNIILNSSSSINELTSIYGSVPSIR 275
>gnl|CDD|190345 pfam02560, Cyanate_lyase, Cyanate lyase C-terminal domain. Cyanate
lyase (also known as cyanase) EC:4.2.1.104 is
responsible for the hydrolysis of cyanate, allowing
organisms that possess the enzyme to overcome the
toxicity of environmental cyanate. This enzyme is
composed of two domains, an N-terminal helix-turn-helix
and this structurally unique C-terminal domain.
Length = 73
Score = 26.4 bits (59), Expect = 7.6
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 270 ITRLNDNLANYAKNSIRKKMDSFNEDTINSAVDAYIKMMKEAQADGDR 317
I RL + + Y +I++ + D I SA+D + + K GDR
Sbjct: 12 IYRLYEVVMVYGP-TIKELIHEEFGDGIMSAIDFKMDVDKVEDPKGDR 58
>gnl|CDD|240359 PTZ00324, PTZ00324, glutamate dehydrogenase 2; Provisional.
Length = 1002
Score = 29.0 bits (65), Expect = 8.7
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 286 RKKMDSFNEDTINSAVDAYIKMMKEAQAD 314
R + F+E I A+ Y + +K D
Sbjct: 370 RLTQEVFSERYIGEAIALYPEFVKLLYED 398
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.323 0.140 0.432
Gapped
Lambda K H
0.267 0.0726 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 27,649,796
Number of extensions: 2768481
Number of successful extensions: 2474
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2422
Number of HSP's successfully gapped: 46
Length of query: 516
Length of database: 10,937,602
Length adjustment: 101
Effective length of query: 415
Effective length of database: 6,457,848
Effective search space: 2680006920
Effective search space used: 2680006920
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (27.3 bits)