RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy15755
(516 letters)
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase;
HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Length = 479
Score = 335 bits (861), Expect = e-110
Identities = 123/523 (23%), Positives = 210/523 (40%), Gaps = 77/523 (14%)
Query: 3 SRPKHFPPGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVAS 62
S PPGP P G+ L + F +T ++ R + + L P VV +
Sbjct: 6 SSKGKLPPGPLPL-PGLGNLLHVDF---QNTPYCFDQLRRRFGD-VFSLQLAWTPVVVLN 60
Query: 63 DEKSIRELLMK--PQFQGRIDQVVSLVRVDFGEERGIIF-TEGDLWQQQKRFFLRHLRDH 119
++RE L+ R ++ + +G+ G W++Q+RF + LR+
Sbjct: 61 GLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNL 120
Query: 120 GFGKRSEPLEVQLAAEIQDLITFLREERNHPAYQNGLALIPSIF---AWGNIALLMSALT 176
G GK+S LE + E L +G P+ A N+ +++LT
Sbjct: 121 GLGKKS--LEQWVTEEAACLCAAFANH-------SGRPFRPNGLLDKAVSNV---IASLT 168
Query: 177 -GEKFTGREGKDTLSDIHWNALNFQFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDN 235
G +F + L + + + L L VP ++P
Sbjct: 169 CGRRF-EYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIP--------------- 212
Query: 236 LANYAKFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLANYAKNSIRKKMDSFNE- 294
+ R + + +++
Sbjct: 213 -----------------------------ALAGKVLRFQKAFLTQLDELLTEHRMTWDPA 243
Query: 295 DTINSAVDAYIKMMKEAQADGDRETYFTEEQLKLVIQDFTFPASNTISGQL--GFLWQQF 352
+A++ M++A+ + + + F +E L++V+ D T S L G L
Sbjct: 244 QPPRDLTEAFLAEMEKAKGNPE--SSFNDENLRIVVADLFSAGMVTTSTTLAWGLLL--M 299
Query: 353 LLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHKATED 412
+LHP+VQ ++Q+E+D V+G+ P + +A + YT A I E+ R+ +VPL V H + D
Sbjct: 300 ILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRD 359
Query: 413 ANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRTLPFGFGKR 472
G+ + KGT ++ +L + D +W P F PE FLD+ G K + LPF G+R
Sbjct: 360 IEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRR 419
Query: 473 LCPGETFARQNMFMYVAGLLQNFTFSLPEGAKLPDDSKYIPGL 515
C GE AR +F++ LLQ+F+FS+P G P +
Sbjct: 420 ACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSH-HGVFAF 461
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase,
acetaminophen, oxidoreductase, heme, endoplasmic
reticulum, iron, membrane; HET: HEM; 2.20A {Homo
sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Length = 476
Score = 334 bits (858), Expect = e-110
Identities = 138/524 (26%), Positives = 225/524 (42%), Gaps = 83/524 (15%)
Query: 3 SRPKHFPPGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVAS 62
S PPGP P G+ + + K+ ++ + + + Y+G VV
Sbjct: 6 SSKGKLPPGPFPL-PIIGNLFQLEL---KNIPKSFTRLAQRFGP-VFTLYVGSQRMVVMH 60
Query: 63 DEKSIRELLMK--PQFQGRIDQVVSLVRVDFGEERGIIFTEGDLWQQQKRFFLRHLRDHG 120
K+++E L+ +F GR D +RGIIF G W+ +RF L LR++G
Sbjct: 61 GYKAVKEALLDYKDEFSGRGDLPA----FHAHRDRGIIFNNGPTWKDIRRFSLTTLRNYG 116
Query: 121 FGKRSEPLEVQLAAEIQDLITFLREERNHPAYQNGLALIPSIFAWGNIALLMSALT-GEK 179
GK+ E ++ E L+ LR+ + P + LI A N+ ++ + +
Sbjct: 117 MGKQG--NESRIQREAHFLLEALRKTQGQP--FDPTFLI--GCAPCNV---IADILFRKH 167
Query: 180 FTGREGKDT--LSDIHWNALNFQFYTEPLAGTLTFVP-FAKYLPPFFGYMKDITRLNDNL 236
F + D L ++ NF + P P F YLP G + + + +
Sbjct: 168 F---DYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLP---GSHRKVIKNVAEV 221
Query: 237 ANYAKFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLANYAKNSIRKKMDSFNEDT 296
Y R+ ++ + N R D
Sbjct: 222 KEYVS-----------------------------ERVKEHHQSLDPNCPR--------DL 244
Query: 297 INSAVDAYIKMMKEAQADGDRETYFTEEQLKLVIQDFTFPA-----SNTISGQLGFLWQQ 351
D + M++ + + +T + + + + D F A S T+ + G L
Sbjct: 245 T----DCLLVEMEKEKHSAE--RLYTMDGITVTVADL-FFAGTETTSTTL--RYGLLI-- 293
Query: 352 FLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHKATE 411
+ +PE++ K+ EE+DRV+G S +P + R E+ Y +A + EI R+ TLVP ++PH+AT
Sbjct: 294 LMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATR 353
Query: 412 DANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRTLPFGFGK 471
D F GY + KGT++VP+L + D + DPE F+PE FL+ NG+ K D PF GK
Sbjct: 354 DTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDYFKPFSTGK 413
Query: 472 RLCPGETFARQNMFMYVAGLLQNFTFSLPEGAKLPDDSKYIPGL 515
R+C GE AR +F+ + +LQ+F K D S G
Sbjct: 414 RVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGF 457
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug
metabolism, structural genomics, structural genomics
consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens}
SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Length = 481
Score = 333 bits (856), Expect = e-109
Identities = 128/524 (24%), Positives = 209/524 (39%), Gaps = 83/524 (15%)
Query: 4 RPKHFPPGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVASD 63
RP FPPGP P+ G+ S L H + K ++Y I LG TVV +
Sbjct: 9 RPMGFPPGPPGL-PFIGNIYS-LAASSELPHVYMRKQSQVYGE-IFSLDLGGISTVVLNG 65
Query: 64 EKSIRELLMKP--QFQGRIDQVVSLVRVDFGEERGIIF-TEGDLWQQQKRFFLRHLRDHG 120
++E L+ F R + + + G++ G W +R + R G
Sbjct: 66 YDVVKECLVHQSEIFADRPCLPLFM---KMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFG 122
Query: 121 FGKRSEPLEVQLAAEIQDLITFLREERNHPAYQNGLALIPSIF---AWGNIALLMSALT- 176
+G++S E ++ E + + + P A NI + +
Sbjct: 123 YGQKS--FESKILEETKFFNDAIETYKGRP-------FDFKQLITNAVSNI---TNLIIF 170
Query: 177 GEKFTGREGKDTLSDIHWNALNFQFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNL 236
GE+F E D I + N + P+ LP
Sbjct: 171 GERF-TYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPF--------------- 214
Query: 237 ANYAKFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLANYAKNSIRKKMDSFNEDT 296
G + + R + ++ I K +
Sbjct: 215 ----------------------------GKHQQLFRNAAVVYDFLSRLIEKASVNRKPQL 246
Query: 297 INSAVDAYIKMMKEAQADGDRETYFTEEQLKLVIQDFTFPA-----SNTISGQLGFLWQQ 351
VDAY+ M + + D + F++E L + + A +N + + F+
Sbjct: 247 PQHFVDAYLDEMDQGKNDPS--STFSKENLIFSVGEL-IIAGTETTTNVLRWAILFM--- 300
Query: 352 FLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHKATE 411
L+P +Q ++Q+E+D ++G + P+ + + ++ YTEA + E++R+ +VPL + H +E
Sbjct: 301 -ALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSE 359
Query: 412 DANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRTLPFGFGK 471
DA GY + KGT ++ +LY +H D W DPE F PERFLDS+G KK+ +PF G+
Sbjct: 360 DAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGR 419
Query: 472 RLCPGETFARQNMFMYVAGLLQNFTFSLPEGAKLPDDSKYIPGL 515
R C GE AR MF++ LLQ F P D K G+
Sbjct: 420 RHCLGEHLARMEMFLFFTALLQRFHLHFPHELVP--DLKPRLGM 461
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing
enzyme, coumarin 7-hydroxylase, nicotine oxidase,
oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB:
1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A*
2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Length = 476
Score = 329 bits (847), Expect = e-108
Identities = 138/524 (26%), Positives = 227/524 (43%), Gaps = 82/524 (15%)
Query: 3 SRPKHFPPGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVAS 62
S PPGP+ P+ G++L + + +L K+ Y + +LGP VV
Sbjct: 6 SSKGKLPPGPTPL-PFIGNYLQLNT---EQMYNSLMKISERYGP-VFTIHLGPRRVVVLC 60
Query: 63 DEKSIRELLMK--PQFQGRIDQVVSLVRVDFGEERGIIFTEGDLWQQQKRFFLRHLRDHG 120
++RE L+ +F GR +Q + G++F+ G+ +Q +RF + LRD G
Sbjct: 61 GHDAVREALVDQAEEFSGRGEQATFD---WVFKGYGVVFSNGERAKQLRRFSIATLRDFG 117
Query: 121 FGKRSEPLEVQLAAEIQDLITFLREERNHPAYQNGLALIPSIFAWGNIALLMSALT-GEK 179
GKR +E ++ E LI LR + + N+ +S++ G++
Sbjct: 118 VGKRG--IEERIQEEAGFLIDALRGTGGAN--IDPTFFL--SRTVSNV---ISSIVFGDR 168
Query: 180 FTGREGKDT--LSDIHWNALNFQFYTEPLAGTL-TFVPFAKYLPPFFGYMKDITRLNDNL 236
F + KD LS + FQF + F K+LP G + +L L
Sbjct: 169 F---DYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLP---GPQQQAFQLLQGL 222
Query: 237 ANYAKFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLANYAKNSIRKKMDSFNEDT 296
++ ++ N NS R D
Sbjct: 223 EDFIA-----------------------------KKVEHNQRTLDPNSPR--------DF 245
Query: 297 INSAVDAYIKMMKEAQADGDRETYFTEEQLKLVIQDFTFPA-----SNTISGQLGFLWQQ 351
I D+++ M+E + + + T F + L + + F S T+ + GFL
Sbjct: 246 I----DSFLIRMQEEEKNPN--TEFYLKNLVMTTLNL-FIGGTETVSTTL--RYGFLL-- 294
Query: 352 FLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHKATE 411
+ HPEV+ K+ EE+DRV+G++ P RA++ Y EA I EI R+ ++P+S+ + +
Sbjct: 295 LMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKK 354
Query: 412 DANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRTLPFGFGK 471
D F + + KGT + P L + DP + +P++F P+ FL+ GQ KK D +PF GK
Sbjct: 355 DTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGK 414
Query: 472 RLCPGETFARQNMFMYVAGLLQNFTFSLPEGAKLPDDSKYIPGL 515
R C GE AR +F++ ++QNF + K D S G
Sbjct: 415 RNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGF 458
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1,
P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme
protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Length = 494
Score = 328 bits (844), Expect = e-107
Identities = 123/531 (23%), Positives = 206/531 (38%), Gaps = 90/531 (16%)
Query: 4 RPKHFPPGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVASD 63
+P P G + H H K+ + Y I +G TV+
Sbjct: 5 TGAKYPKSLLSL-PLVGSLPFLPRHG--HMHNNFFKLQKKYGP-IYSVRMGTKTTVIVGH 60
Query: 64 EKSIRELLMK--PQFQGRIDQVVSLVRVDFGEERGIIFTE-GDLWQQQKRFFLRHLRDHG 120
+ +E+L+K F GR ++ + + +GI F + G WQ +R +
Sbjct: 61 HQLAKEVLIKKGKDFSGRPQ--MATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFK 118
Query: 121 FGKRSEPLEVQLAAEIQDLITFLREERNHPAYQNGLALIPSIF---AWGNIALLMSALT- 176
G + LE + EI L L NG ++ S A N+ +S +
Sbjct: 119 DGDQK--LEKIICQEISTLCDMLAT-------HNGQSIDISFPVFVAVTNV---ISLICF 166
Query: 177 GEKFTGREGKD-TLSDIHWNALNFQFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDN 235
+ + D L+ I N + VP+ K P K + +L +
Sbjct: 167 NTSY---KNGDPELNVIQ-NYNEGIIDNLSKDSLVDLVPWLKIFPN-----KTLEKLKSH 217
Query: 236 LANYAKFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLANYAKNSIRKKMDSFNED 295
+ + + + F D
Sbjct: 218 VKIRNDLLNK--------------------------------------ILENYKEKFRSD 239
Query: 296 TINSAVDAYIKMMKEAQADG----DRETYFTEEQLKLVIQDFTFPA-----SNTISGQLG 346
+I + +D ++ + ++ + I D F A ++ + L
Sbjct: 240 SITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDI-FGAGVETTTSVVKWTLA 298
Query: 347 FLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVP 406
FL L +P+V+ K+ EE+D+ VG S P ++ R L EATIRE++R + + P+ +P
Sbjct: 299 FL----LHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIP 354
Query: 407 HKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQL--KKKDRT 464
HKA D++ + V+KGT ++ +L+ LH++ W P+ F PERFL+ G
Sbjct: 355 HKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSY 414
Query: 465 LPFGFGKRLCPGETFARQNMFMYVAGLLQNFTFSLPEGAKLPDDSKYIPGL 515
LPFG G R C GE ARQ +F+ +A LLQ F +P+ +LP + IP +
Sbjct: 415 LPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSL-EGIPKV 464
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme,
oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP:
a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A*
2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Length = 477
Score = 326 bits (839), Expect = e-107
Identities = 137/527 (25%), Positives = 225/527 (42%), Gaps = 88/527 (16%)
Query: 3 SRPKHFPPGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVAS 62
S PPGP+ P G+ L I K+L + ++Y + Y G P VV
Sbjct: 7 SGRGKLPPGPTPL-PVIGNILQIGI---KDISKSLTNLSKVY-GPVFTLYFGLKPIVVLH 61
Query: 63 DEKSIRELLMK--PQFQGRIDQVVSLVRVDFGEERGIIFTEGDLWQQQKRFFLRHLRDHG 120
++++E L+ +F GR ++ GI+F+ G W++ +RF L LR+ G
Sbjct: 62 GYEAVKEALIDLGEEFSGRGIFPLAE---RANRGFGIVFSNGKKWKEIRRFSLMTLRNFG 118
Query: 121 FGKRSEPLEVQLAAEIQDLITFLREERNHPAYQNGLALIPSIF---AWGNIALLMSALT- 176
GKRS +E ++ E + L+ LR+ + P P+ A N+ + ++
Sbjct: 119 MGKRS--IEDRVQEEARCLVEELRKTKASP-------CDPTFILGCAPCNV---ICSIIF 166
Query: 177 GEKFTGREGKDT--LSDIHWNALNFQFYTEPLAGTL-TFVPFAKYLPPFFGYMKDITRLN 233
++F + KD L+ + N + + P F P Y P G +
Sbjct: 167 HKRF---DYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFP---GTHNKL---- 216
Query: 234 DNLANYAKFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLANYAKNSIRKKMDSFN 293
L N A +Y +++ +S +
Sbjct: 217 --LKNVAFMK-----------------------------------SYILEKVKEHQESMD 239
Query: 294 EDTINSAVDAYIKMMKEAQADGDRETYFTEEQLKLVIQDFTFPA-----SNTISGQLGFL 348
+ +D ++ M++ + + + FT E L+ D F A S T+ + L
Sbjct: 240 MNNPQDFIDCFLMKMEKEKHNQP--SEFTIESLENTAVDL-FGAGTETTSTTL--RYALL 294
Query: 349 WQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHK 408
L HPEV K+QEE++RV+GR+ P + R+ + YT+A + E+ RY L+P S+PH
Sbjct: 295 L--LLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHA 352
Query: 409 ATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRTLPFG 468
T D F Y + KGT ++ SL + +D + +PE F P FLD G KK +PF
Sbjct: 353 VTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFS 412
Query: 469 FGKRLCPGETFARQNMFMYVAGLLQNFTFSLPEGAKLPDDSKYIPGL 515
GKR+C GE A +F+++ +LQNF K D + + G
Sbjct: 413 AGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGF 459
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP
LM2, cytochro monooxygenase; HET: HEM; 1.60A
{Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A*
2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A*
3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Length = 476
Score = 325 bits (836), Expect = e-106
Identities = 139/524 (26%), Positives = 222/524 (42%), Gaps = 82/524 (15%)
Query: 3 SRPKHFPPGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVAS 62
S PPGPS P G+ L + ++ ++ Y + YLG P VV
Sbjct: 6 SSKGKLPPGPSPL-PVLGNLLQMDR---KGLLRSFLRLREKYGD-VFTVYLGSRPVVVLC 60
Query: 63 DEKSIRELLMK--PQFQGRIDQVVSLVRVDFGEERGIIFTEGDLWQQQKRFFLRHLRDHG 120
+IRE L+ F GR V + G+IF G+ W+ +RF L +RD G
Sbjct: 61 GTDAIREALVDQAEAFSGRGKIAVVD---PIFQGYGVIFANGERWRALRRFSLATMRDFG 117
Query: 121 FGKRSEPLEVQLAAEIQDLITFLREERNHPAYQNGLALIPSIFAWGNIALLMSALT-GEK 179
GKRS +E ++ E + L+ LR+ + + L NI + ++ G++
Sbjct: 118 MGKRS--VEERIQEEARCLVEELRKSKGAL--LDNTLLF--HSITSNI---ICSIVFGKR 168
Query: 180 FTGREGKDT--LSDIHWNALNFQFYTEPLAGTLTFVP-FAKYLPPFFGYMKDITRLNDNL 236
F + KD L + +F + + F K+ P G + I R +
Sbjct: 169 F---DYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFP---GTHRQIYRNLQEI 222
Query: 237 ANYAKFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLANYAKNSIRKKMDSFNEDT 296
+ + + A ++ R D
Sbjct: 223 NTFIG-----------------------------QSVEKHRATLDPSNPR--------DF 245
Query: 297 INSAVDAYIKMMKEAQADGDRETYFTEEQLKLVIQDFTFPA-----SNTISGQLGFLWQQ 351
I D Y+ M++ ++D + F + L L + F A S T+ + GFL
Sbjct: 246 I----DVYLLRMEKDKSDPS--SEFHHQNLILTVLSL-FFAGTETTSTTL--RYGFLL-- 294
Query: 352 FLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHKATE 411
L +P V ++Q+E+++V+G P L+ RA++ YT+A I EI R L+P VPH T+
Sbjct: 295 MLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTK 354
Query: 412 DANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRTLPFGFGK 471
D F GY + K T + P L +DP + P F P FLD+NG LK+ + +PF GK
Sbjct: 355 DTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGK 414
Query: 472 RLCPGETFARQNMFMYVAGLLQNFTFSLPEGAKLPDDSKYIPGL 515
R+C GE AR +F++ +LQNF+ + P + D + G+
Sbjct: 415 RICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGV 458
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing
enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8-
benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo
sapiens}
Length = 495
Score = 324 bits (834), Expect = e-106
Identities = 126/526 (23%), Positives = 222/526 (42%), Gaps = 85/526 (16%)
Query: 4 RPKHFPPGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVASD 63
+ PP P W P GH L++ + H AL++M + Y +L +G P +V S
Sbjct: 13 KGLKSPPEPWGW-PLLGHVLTLG----KNPHLALSRMSQRYGD-VLQIRIGSTPVLVLSR 66
Query: 64 EKSIRELLMK--PQFQGRIDQVVSLVRVDFGEERGIIF--TEGDLWQQQKRFFLRHLRDH 119
+IR+ L++ F+GR + + + G + + F G +W ++R L
Sbjct: 67 LDTIRQALVRQGDDFKGR-PDLYTSTLITDG--QSLTFSTDSGPVWAARRRLAQNALNTF 123
Query: 120 GFGKRSEP-----LEVQLAAEIQDLITFLREERNHPAYQNGLALIPSIFAWGNIALLMSA 174
LE ++ E + LI+ L+E P + + + + + N+ + A
Sbjct: 124 SIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQV--VVSVANV---IGA 178
Query: 175 LT-GEKFTGREGKDTLSDIHWNALNFQFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLN 233
+ G+ F + LS + + + L F P +YLP
Sbjct: 179 MCFGQHFP-ESSDEMLSLVKNTHEFVETASSGNP--LDFFPILRYLP------------- 222
Query: 234 DNLANYAKFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLANYAKNSIRKKMDSFN 293
++ N + + ++++ F+
Sbjct: 223 ------------------------------NPALQRFKAFNQRFLWFLQKTVQEHYQDFD 252
Query: 294 EDTINSAVDAYIKMMKEAQADGDRETYFTEEQLKLVIQDFTFPA-----SNTISGQLGFL 348
++++ A K K + +E++ ++ D F A + IS L +L
Sbjct: 253 KNSVRDITGALFKHSK--KGPRASGNLIPQEKIVNLVNDI-FGAGFDTVTTAISWSLMYL 309
Query: 349 WQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHK 408
+ PE+Q KIQ+ELD V+GR P L+ R +L Y EA I E R+ + +P ++PH
Sbjct: 310 ----VTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHS 365
Query: 409 ATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRT---L 465
T D G+++ K + + + +++DP++W DP FRPERFL ++G K + +
Sbjct: 366 TTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMM 425
Query: 466 PFGFGKRLCPGETFARQNMFMYVAGLLQNFTFSLPEGAKLPDDSKY 511
FG GKR C GE A+ +F+++A LLQ FS+P G K+ Y
Sbjct: 426 LFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIY 471
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase,
alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase;
HET: HEM BHF; 2.70A {Homo sapiens}
Length = 507
Score = 317 bits (816), Expect = e-103
Identities = 124/535 (23%), Positives = 216/535 (40%), Gaps = 92/535 (17%)
Query: 3 SRPKHFPPGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVAS 62
+ K PPGP W P G+ ++ H + A++ R Y + LG P VV +
Sbjct: 5 TSSKGKPPGPFAW-PLIGNAAAVG----QAAHLSFARLARRYGD-VFQIRLGSCPIVVLN 58
Query: 63 DEKSIRELLMK--PQFQGRIDQVVSLVRVDFGEERGIIF-TEGDLWQQQKRFFLRHLRD- 118
E++I + L++ F R S V G R + F + W+ Q+R +R+
Sbjct: 59 GERAIHQALVQQGSAFADR-PSFASFRVVSGG--RSMAFGHYSEHWKVQRRAAHSMMRNF 115
Query: 119 ---HGFGKRSEPLEVQLAAEIQDLITFLREERNHPAYQNGLALIPSIF---AWGNIALLM 172
++ LE + +E ++L+ L +G L P A N+ M
Sbjct: 116 FTRQPRSRQV--LEGHVLSEARELVALLVRGSA-----DGAFLDPRPLTVVAVANV---M 165
Query: 173 SALT-GEKFTGREGKD-TLSDIHWNALNFQFYTEPLAGTLTFVPFAKYLPPFFGYMKDIT 230
SA+ G ++ D ++ + T + +P+ +Y P ++ +
Sbjct: 166 SAVCFGCRY---SHDDPEFRELL-SHNEEFGRTVGAGSLVDVMPWLQYFP---NPVRTV- 217
Query: 231 RLNDNLANYAKFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLANYAKNSIRKKMD 290
++ +LN N +N+ + + +
Sbjct: 218 ------------------------------------FREFEQLNRNFSNFILDKFLRHCE 241
Query: 291 SFNEDTIN-SAVDAYIKMMKEAQAD--GDRETYFTEEQLKLVIQDFTFPA-----SNTIS 342
S +DA+I ++ A E + I D F A S +
Sbjct: 242 SLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDI-FGASQDTLSTALQ 300
Query: 343 GQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVP 402
L +P+VQT++Q ELD+VVGR LP + + L Y A + E MR+ + VP
Sbjct: 301 WLLLLF----TRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVP 356
Query: 403 LSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKK- 461
+++PH T + + +GYH+ K T++ + + +++DP W +PENF P RFLD +G + K
Sbjct: 357 VTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDL 416
Query: 462 -DRTLPFGFGKRLCPGETFARQNMFMYVAGLLQNFTFSLPEGAKLPDDSKYIPGL 515
R + F GKR C GE ++ +F++++ L F P + GL
Sbjct: 417 TSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNE--PAKMNFSYGL 469
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET:
HEM 3QZ; 3.00A {Bos taurus}
Length = 496
Score = 301 bits (774), Expect = 4e-97
Identities = 106/533 (19%), Positives = 189/533 (35%), Gaps = 99/533 (18%)
Query: 2 FSRPKHFPPGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVA 61
L L + L + + + LG VV
Sbjct: 19 LWGRWKLRNLHLPPL-----VPGFLHLLQPNLPIHLLSLTQKLGP-VYRLRLGLQEVVVL 72
Query: 62 SDEKSIRELLMKP--QFQGRIDQVVSLVRVDFGEERGIIFTE-GDLWQQQKRFFLRHLRD 118
+ +++I E +++ F GR + ++ + I + LW+ K+ L
Sbjct: 73 NSKRTIEEAMIRKWVDFAGRPQ--IPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLL 130
Query: 119 HGFGKRSEPLEVQLAAEIQDLITFLREERNHPAYQNGLALIPSIF-AWGNIALLMSALT- 176
+ S +E + Q+ +R + P + + +I + LT
Sbjct: 131 --GTRSS--MEPWVDQLTQEFCERMRVQAGAP-----VTIQKEFSLLTCSI---ICYLTF 178
Query: 177 GEKFTGREGKD----TLSDIHWNALNFQFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRL 232
G K + + + L VPF ++ P
Sbjct: 179 GNKE---DTLVHAFHDCVQ-----DLMKTWDHWSIQILDMVPFLRFFP------------ 218
Query: 233 NDNLANYAKFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLANYAKNSIRKKMDSF 292
+ + + +N + + +R+ +S
Sbjct: 219 -------------------------------NPGLWRLKQAIENRDHMVEKQLRRHKESM 247
Query: 293 NEDTINSAVDAYIKMMKEAQADGDRETYFTEEQLKLVIQDFTFPA-----SNTISGQLGF 347
D ++ + + + + E + + + D F ++T+S + F
Sbjct: 248 VAGQWRDMTDYMLQGVGRQRVE-EGPGQLLEGHVHMSVVDL-FIGGTETTASTLSWAVAF 305
Query: 348 LWQQFLLHPEVQTKIQEELDRVVGR---SELPNLNHRAELHYTEATIREIMRYKTLVPLS 404
L L HPE+Q ++QEELDR +G RA L ATI E++R + +VPL+
Sbjct: 306 L----LHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLA 361
Query: 405 VPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRT 464
+PH+ T ++ GY + +G +++P+L H D +W P FRP+RFL+
Sbjct: 362 LPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEPGA----NPSA 417
Query: 465 LPFGFGKRLCPGETFARQNMFMYVAGLLQNFTFSLPEGAKLPD-DSKYIPGLN 516
L FG G R+C GE+ AR +F+ +A LLQ FT P LP G+N
Sbjct: 418 LAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVN 470
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial;
mitochondrial cytochrome P450, monotopic membrane
protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus
norvegicus} PDB: 3k9y_A*
Length = 482
Score = 240 bits (614), Expect = 1e-73
Identities = 88/515 (17%), Positives = 170/515 (33%), Gaps = 73/515 (14%)
Query: 4 RPKHFPPGPSLWFPYYGHFLSILFL-HYHHTHKALAKMCRIYKSKILGFYLGPFPTVVAS 62
R PGP+ W P G L I + H LA+ + Y +I LG F +V
Sbjct: 21 RNVTDLPGPTNW-PLLGSLLEIFWKGGLKKQHDTLAEYHKKY-GQIFRMKLGSFDSVHLG 78
Query: 63 DEKSIRELLMKPQ--FQGRIDQVVSLVRVDFGEERGIIFTEGDLWQQQKRFFLRHLRDHG 120
+ L Q + R E G++ EG WQ+ + F + L
Sbjct: 79 SPSLLEALYRTESAHPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLM--- 135
Query: 121 FGKRSEPLEVQLAAEIQDLITFLREERNHPAYQNGLA--LIPSIFAWG-NIALLMSALTG 177
L+ ++ + D + + E + + G L + W + L
Sbjct: 136 KPVEIMKLDKKINEVLADFLERMDELCD----ERGRIPDLYSELNKWSFES--ICLVLYE 189
Query: 178 EKFTGREGKDTLSDIHWNALNFQFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLA 237
++F G K+T + + + ++ P
Sbjct: 190 KRF-GLLQKETEEE-------ALTFITAIKTMMSTFGKMMVTPVEL-------------- 227
Query: 238 NYAKFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLANYAKNSIRKKMDSFNEDTI 297
K L + T D + K I ++ +++
Sbjct: 228 -------------------HKRLNT--KVWQAHTLAWDTIFKSVKPCIDNRLQRYSQQPG 266
Query: 298 NSAVDAYIKMMKEAQADGDRETYFTEEQLKLVIQDFTFPASNTISGQLGFLWQQFLLHPE 357
+ + + + ++++L + + A T + L ++ +P+
Sbjct: 267 ADFLCDIYQ-----------QDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQ 315
Query: 358 VQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMG 417
Q ++ +E+ V+ ++ P + Y +A ++E MR VP +
Sbjct: 316 AQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPF-TTRTLDKPTVLGE 374
Query: 418 YHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGE 477
Y + KGT++ + L + D + D FRPER+L + LPFG GKR+C G
Sbjct: 375 YALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKK-INPFAHLPFGIGKRMCIGR 433
Query: 478 TFARQNMFMYVAGLLQNFTFSLPEGAKLPDDSKYI 512
A + + + ++Q + + + I
Sbjct: 434 RLAELQLHLALCWIIQKYDIVATDNEPVEMLHLGI 468
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450,
cholesterol SIDE chain cleavage, structural genomics,
structural genomics consortium, SGC; HET: HEM CLR; 2.10A
{Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Length = 487
Score = 204 bits (521), Expect = 6e-60
Identities = 75/512 (14%), Positives = 160/512 (31%), Gaps = 72/512 (14%)
Query: 4 RPKHFPPGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVASD 63
RP + P P + + H H + + Y I LG +V D
Sbjct: 6 RPFNEIPSPGDN-GWLNLYHFWRETGTHKVHLHHVQNFQKY-GPIYREKLGNVESVYVID 63
Query: 64 EKSIRELLMK--PQFQGRIDQVVSLVRVDFGEERGIIFTEGDLWQQQKRFFLRHLRDHGF 121
+ + L P + + + G++ + W++ + + +
Sbjct: 64 PEDVALLFKSEGPNPERFLIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEV----M 119
Query: 122 -GKRSEPLEVQLAAEIQDLITFLREERNHPAYQNGLA--LIPSIFAWGNIALLMSALTGE 178
+ ++ L A +D ++ L + + +F + ++ GE
Sbjct: 120 APEATKNFLPLLDAVSRDFVSVLHRRIKKAG-SGNYSGDISDDLFRFAFESITNVIF-GE 177
Query: 179 KFTGREGKDTLSDIHWNALNFQFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLAN 238
+ E P A+ F + + + + N
Sbjct: 178 RQGMLEEVVN-------------------------PEAQR---FIDAIYQMFHTSVPMLN 209
Query: 239 YAKFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLANYAKNSIRKKMDSFNEDTIN 298
+ KD D + + A + +
Sbjct: 210 L-------------PPDLFRLFRT--KTWKDHVAAWDVIFSKADIYTQNFYWELRQK--G 252
Query: 299 SAVDAYIKMMKEAQADGDRETYFTEEQLKLVIQDFTFPASNTISGQLGFLWQQFLLHPEV 358
S Y ++ D + E +K + + +T S L + + + +V
Sbjct: 253 SVHHDYRGILYRLLGDSK----MSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKV 308
Query: 359 QTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGY 418
Q ++ E+ +++ + +A+I+E +R + + D Y
Sbjct: 309 QDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVT-LQRYLVNDLVLRDY 367
Query: 419 HVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRT----LPFGFGKRLC 474
+ T++ ++Y L +P + DPENF P R+L + K+ T L FG+G R C
Sbjct: 368 MIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKD-----KNITYFRNLGFGWGVRQC 422
Query: 475 PGETFARQNMFMYVAGLLQNFTFSLPEGAKLP 506
G A M +++ +L+NF + + +
Sbjct: 423 LGRRIAELEMTIFLINMLENFRVEIQHLSDVG 454
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase,
structural genomics, structural genomics consortium,
SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo
sapiens} PDB: 3sn5_A*
Length = 491
Score = 186 bits (475), Expect = 3e-53
Identities = 83/532 (15%), Positives = 152/532 (28%), Gaps = 99/532 (18%)
Query: 3 SRPKHFPPGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVAS 62
R PP + PY G L + L R + + L +
Sbjct: 9 RRQTGEPPLENGLIPYLGCALQFGAN----PLEFLRANQRKH-GHVFTCKLMGKYVHFIT 63
Query: 63 DEKSIRELLMKPQFQGRIDQVVSLVRVDFGEERGIIFTEGDLWQQQKRFFLRHLRDHGFG 122
+ S ++L ++ + FG R I +G+ + F++ L+ G
Sbjct: 64 NPLSYHKVLCHGKYFDWKKFHFATSAKAFGH-RSIDPMDGNTTENINDTFIKTLQ----G 118
Query: 123 KRSEPLEVQLAAEIQDLITFLREERNHPAYQNGLALIPSIFAWGNIALLMSALTGEKFTG 182
L + +Q ++ + A + + + LT
Sbjct: 119 HALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCY---RVMFEAGYLT------ 169
Query: 183 REGKDTLSDIHWNALNFQFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLANYAKF 242
FG +D+TR + A+
Sbjct: 170 ---------------------------------------IFG--RDLTRRDTQKAHILNN 188
Query: 243 YTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLANYAKNSIRKKMDSFNEDTINSAVD 302
F LP + + LA ++ +K +S +
Sbjct: 189 LDNFKQFDKVFPALVAGLP--IHMFRTAHNAREKLAESLRHENLQKRES---------IS 237
Query: 303 AYIKMMKEAQADGDRETYFTEEQLKLVIQDFTFPASNTISGQLGFLWQQFLLHPEVQTKI 362
I + F + + + + + Q + +PE
Sbjct: 238 ELISLRMFLNDTLST---FDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAA 294
Query: 363 QEELDRVVGRSELPNLNHR----------AELHYTEATIREIMRYKTLVPLSVPHKATED 412
EE+ R + + +L ++ I+E +R + A ED
Sbjct: 295 TEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSS--ASLNIRTAKED 352
Query: 413 ANFM----GYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRT---- 464
Y++ K I+ +H DP+I+ DP F+ +R+LD NG+ K
Sbjct: 353 FTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLK 412
Query: 465 -----LPFGFGKRLCPGETFARQNMFMYVAGLLQNFTFSLPEGAKLPDDSKY 511
+PFG G +CPG FA + ++ +L F L EG
Sbjct: 413 LKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQ 464
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome
P450, endoplasmic reticulum, fatty acid biosynthesis,
heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo
sapiens} PDB: 2iag_A*
Length = 498
Score = 158 bits (401), Expect = 7e-43
Identities = 77/529 (14%), Positives = 158/529 (29%), Gaps = 112/529 (21%)
Query: 3 SRPKHFPPGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVAS 62
+R PP P+ G+ L L +M I +G V
Sbjct: 14 TRRPGEPPLDLGSIPWLGYALDFG----KDAASFLTRMKE-KHGDIFTILVGGRYVTVLL 68
Query: 63 DEKSIRELLMKPQ----FQGRIDQVVSLVRVDFGEERGIIFTEGDLWQQQKRFFLRHLRD 118
D S ++ +P+ F + L+ F + ++ D + K L
Sbjct: 69 DPHSYDAVVWEPRTRLDFHAY---AIFLMERIFDV-QLPHYSPSDEKARMKLTLL----- 119
Query: 119 HGFGKRSEPLEVQLAAEIQDLITFLREERNHPAYQNGLALIPSIFAW-GNIALLMSALT- 176
+ + L + + ++ E ++ GL + + L LT
Sbjct: 120 ---HRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGL------LDFSYSFLLRAGYLTL 170
Query: 177 -GEKFTGREGKDTLSDIHWNALNFQFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDN 235
G + R + D +A F TF + LP
Sbjct: 171 YGIEALPRTHESQAQDRVHSADVFH----------TFRQLDRLLPKLA------------ 208
Query: 236 LANYAKFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLANYAKNSIRKKMDSFNED 295
G + + L + + ++
Sbjct: 209 -----------------------RGSLSVGDKDHMCSVKSRLWKLLSPARLARRAHRSKW 245
Query: 296 TINSAVDAYIKMMKEAQADGDRETYFTEEQLKLVIQDFTFPASNTISGQLGFLWQQFLLH 355
+++Y+ + E +EE + + + +L L +
Sbjct: 246 -----LESYLLHL--------EEMGVSEEMQARALVLQLWATQGNMGPAAFWLLLFLLKN 292
Query: 356 PEVQTKIQEELDRVVGRSELPNLNHR-------AELHYTEATIREIMRYKTLVPLSVPHK 408
PE ++ EL+ ++ ++E P ++ + E +R + +
Sbjct: 293 PEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTA--APFITRE 350
Query: 409 ATED-----ANFMGYHVEKGT-IMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKD 462
D A+ +++ +G +++ DP+I+ DPE F+ RFL+ +G KK
Sbjct: 351 VVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDF 410
Query: 463 RT---------LPFGFGKRLCPGETFARQNMFMYVAGLLQNFTFSLPEG 502
+P+G G C G ++A ++ +V +L + L
Sbjct: 411 YKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINA 459
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding,
monooxygenase, NADP, oxidoreductase, protein-inhibitor
complex; HET: HEM CM6; 1.50A {Mycobacterium
tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A*
2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A*
1e9x_A* 1u13_A*
Length = 455
Score = 148 bits (376), Expect = 1e-39
Identities = 37/197 (18%), Positives = 81/197 (41%), Gaps = 8/197 (4%)
Query: 314 DGDRETYFTEEQLKLVIQDFTFPASNTISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRS 373
F+ +++ + F +T SG + + + H + + +ELD + G
Sbjct: 234 AETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDG 293
Query: 374 ELPNLNHRAELHYTEATIREIMRYKTLVP--LSVPHKATEDANFMGYHVEKGTIMVPSLY 431
+ + ++ E ++E +R L P + + A + G+ + +G ++ S
Sbjct: 294 RSVSFHALRQIPQLENVLKETLR---LHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPA 350
Query: 432 CLHNDPDIWGDPENFRPERFLDSNGQLKKKDRT--LPFGFGKRLCPGETFARQNMFMYVA 489
+ P+ + DP +F P R+ + +R +PFG G+ C G FA + +
Sbjct: 351 ISNRIPEDFPDPHDFVPARYEQPRQE-DLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFS 409
Query: 490 GLLQNFTFSLPEGAKLP 506
LL+ + F + + +
Sbjct: 410 VLLREYEFEMAQPPESY 426
Score = 44.6 bits (106), Expect = 6e-05
Identities = 10/103 (9%), Positives = 25/103 (24%), Gaps = 9/103 (8%)
Query: 9 PPGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVASDEKSIR 68
P +GH + ++ + F L V+ S +
Sbjct: 7 PRVSG-GHDEHGHLEEFR----TDPIGLMQRVRDELGD-VGTFQLAGKQVVLLSGSHANE 60
Query: 69 ELLMKPQFQGRIDQVVSLVRVDFGEERGIIFTEGDLWQQQKRF 111
+ + FGE + + ++++
Sbjct: 61 FFFRAGDDDLDQAKAYPFMTPIFGEG---VVFDASPERRKEML 100
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase,
metal-binding, heme, iron; HET: HEM REA; 2.10A
{Synechocystis SP} PDB: 2ve4_A*
Length = 444
Score = 147 bits (372), Expect = 3e-39
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 3/196 (1%)
Query: 312 QADGDRETYFTEEQLKLVIQDFTFPASNTISGQLGFLWQQFLLHPEVQTKIQEELDRVVG 371
A D + +LK I F T++ L H +++ ++++E +++
Sbjct: 230 AARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQL 289
Query: 372 RSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLY 431
S+ ++ Y + ++E++R V + +D F G+H KG ++ +
Sbjct: 290 -SQELTAETLKKMPYLDQVLQEVLRLIPPVGG-GFRELIQDCQFQGFHFPKGWLVSYQIS 347
Query: 432 CLHNDPDIWGDPENFRPERFLDSNGQLKKKDRT-LPFGFGKRLCPGETFARQNMFMYVAG 490
H DPD++ DPE F PERF +PFG G R C G+ FAR M ++
Sbjct: 348 QTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATR 407
Query: 491 LLQNFTFSLPEGAKLP 506
L+Q F ++L G L
Sbjct: 408 LIQQFDWTLLPGQNLE 423
Score = 43.4 bits (103), Expect = 1e-04
Identities = 18/115 (15%), Positives = 36/115 (31%), Gaps = 9/115 (7%)
Query: 3 SRPKHFPPGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVAS 62
PPG P+ G L+ L + K + + I L + S
Sbjct: 8 LNSLPIPPGDFGL-PWLGETLNFL-----NDGDFGKKRQQQF-GPIFKTRLFGKNVIFIS 60
Query: 63 DEKSIRELLMKPQFQGRIDQVVSLVRVDFGEERGIIFTEGDLWQQQKRFFLRHLR 117
+ R L K Q + +S + G + G++ + +++ +
Sbjct: 61 GALANRFLFTKEQETFQATWPLSTRIL-LGP-NALATQMGEIHRSRRKILYQAFL 113
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1,
molecular mechanism, heme, iron, metal-binding,
monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor
A3} PDB: 3el3_A*
Length = 467
Score = 145 bits (369), Expect = 1e-38
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 2/167 (1%)
Query: 340 TISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKT 399
TI+ + +L Q HPE +I++E++ V G +L +T I E MR +
Sbjct: 278 TIASTIMWLLQALADHPEHADRIRDEVEAVTG-GRPVAFEDVRKLRHTGNVIVEAMRLRP 336
Query: 400 LVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLK 459
V + + +A ++ GY + G ++ S Y + DP + D F P+R+L
Sbjct: 337 AVWV-LTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANV 395
Query: 460 KKDRTLPFGFGKRLCPGETFARQNMFMYVAGLLQNFTFSLPEGAKLP 506
K PF GKR CP + F+ + + A L + F G+
Sbjct: 396 PKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSNDA 442
Score = 49.6 bits (119), Expect = 1e-06
Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 18/124 (14%)
Query: 4 RPKHFPPGPSLWFPYYGHFLSILF--LHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVA 61
+ P P GH + L + + + R LGP
Sbjct: 20 ELREPPVAGGGV-PLLGHGWRLARDPLAFMSQLRDHGDVVR--------IKLGPKTVYAV 70
Query: 62 SDEKSIRELLMKPQFQGRIDQVVSLVRVDFGEERGIIFTEGDLWQQQKR-----FFLRHL 116
++ + L + P + SL + E G+ G L ++Q+R F L +
Sbjct: 71 TNPELTGALALNPDYHIAGPLWESLEGLLGKE--GVATANGPLHRRQRRTIQPAFRLDAI 128
Query: 117 RDHG 120
+G
Sbjct: 129 PAYG 132
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo
sapiens} PDB: 3eqm_A* 3s7s_A*
Length = 503
Score = 145 bits (367), Expect = 4e-38
Identities = 62/251 (24%), Positives = 100/251 (39%), Gaps = 15/251 (5%)
Query: 259 YLPPFFGYMKDITRLNDNLANYAKNSIRKKMDSFNEDTINSAVDAYIKMMKEAQADGDRE 318
K + +L + + I +K + + + + A+ GD
Sbjct: 233 IFFKISWLYKKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILAEKRGD-- 290
Query: 319 TYFTEEQLKLVIQDFTFPASNTISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNL 378
T E + I + A +T+S L F+ HP V+ I +E+ V+G + +
Sbjct: 291 --LTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERD-IKI 347
Query: 379 NHRAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPD 438
+ +L E I E MRY+ +V L V KA ED GY V+KGT ++ ++ +H +
Sbjct: 348 DDIQKLKVMENFIYESMRYQPVVDL-VMRKALEDDVIDGYPVKKGTNIILNIGRMHR-LE 405
Query: 439 IWGDPENFRPERFLDSNGQLKKKDRT--LPFGFGKRLCPGETFARQNMFMYVAGLLQNFT 496
+ P F E F K PFGFG R C G+ A M + LL+ F
Sbjct: 406 FFPKPNEFTLENFA------KNVPYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFH 459
Query: 497 FSLPEGAKLPD 507
+G +
Sbjct: 460 VKTLQGQCVES 470
Score = 52.7 bits (127), Expect = 2e-07
Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 2/104 (1%)
Query: 9 PPGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVASDEKSIR 68
PGP + G +S + A R+Y + + ++ T++ S S+
Sbjct: 47 IPGPG-YCMGIGPLISHGRFLWMGIGSACNYYNRVYG-EFMRVWISGEETLIISKSSSMF 104
Query: 69 ELLMKPQFQGRIDQVVSLVRVDFGEERGIIFTEGDLWQQQKRFF 112
++ + R + L + E+ I +LW+ + FF
Sbjct: 105 HIMKHNHYSSRFGSKLGLQCIGMHEKGIIFNNNPELWKTTRPFF 148
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide,
monooxygenase, metab enzyme, oxidoreductase, heme,
cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo
sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A*
Length = 456
Score = 143 bits (363), Expect = 7e-38
Identities = 55/265 (20%), Positives = 96/265 (36%), Gaps = 32/265 (12%)
Query: 253 FVPFAKYLPPFFGYMKDITRLNDNLANYAKNSIRKKMDSFNEDTINSAVDAYIKMMKEAQ 312
AK+LP ++++ L ++ ++++ ++ + + +A+
Sbjct: 178 RNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRG--EEVPADILTQILKAE 235
Query: 313 ADGDRETYFTEEQLKLVIQD----FTFPASNTISGQLGFLWQQFLL--HPEVQTKIQEEL 366
+E + D F T + L F L PE+ ++Q E+
Sbjct: 236 EGA-----QDDEG----LLDNFVTFFIAGHETSANHLAFTV--MELSRQPEIVARLQAEV 284
Query: 367 DRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPH---KATEDANFMGYHVEKG 423
D V+G + L Y ++E +R L P E+ G V
Sbjct: 285 DEVIGSKRYLDFEDLGRLQYLSQVLKESLR---LYP-PAWGTFRLLEEETLIDGVRVPGN 340
Query: 424 TIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRT--LPFGFGKRLCPGETFAR 481
T ++ S Y + + DP F P+RF K R PF G R C G+ FA+
Sbjct: 341 TPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGA----PKPRFTYFPFSLGHRSCIGQQFAQ 396
Query: 482 QNMFMYVAGLLQNFTFSLPEGAKLP 506
+ + +A LLQ F L G +
Sbjct: 397 MEVKVVMAKLLQRLEFRLVPGQRFG 421
Score = 35.3 bits (82), Expect = 0.046
Identities = 10/80 (12%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 34 HKALAKMCRIYKSKILGFYLGPFPTVVASDEKSIRELLMKPQF--QGRIDQVVSLVRVDF 91
+ Y ++ + +V+ + +S+++ LM ++ ++ + + V +
Sbjct: 13 QDVFLDWAKKYG-PVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGER 71
Query: 92 GEERGIIF-TEGDLWQQQKR 110
+G++ + W +Q+R
Sbjct: 72 LFGQGLVSECNYERWHKQRR 91
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450
8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio}
PDB: 3b99_A*
Length = 475
Score = 139 bits (353), Expect = 2e-36
Identities = 46/180 (25%), Positives = 72/180 (40%), Gaps = 26/180 (14%)
Query: 352 FLL-HPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVP-LSVPHKA 409
+LL HPE ++EE+ G L + ++ + E +R L +
Sbjct: 279 YLLTHPEALRAVREEIQ---GGKHLRLEERQKNTPVFDSVLWETLR---LTAAALITRDV 332
Query: 410 TED-----ANFMGYHVEKGT-IMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDR 463
T+D +N YH+ +G + V DP I PE F+ +RFL+++ KK
Sbjct: 333 TQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFF 392
Query: 464 T---------LPFGFGKRLCPGETFARQNMFMYVAGLLQNFTFSLPEGAK---LPDDSKY 511
+P+G LCPG FA + V +L F L + L D S+Y
Sbjct: 393 KNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRY 452
Score = 44.2 bits (105), Expect = 6e-05
Identities = 22/139 (15%), Positives = 43/139 (30%), Gaps = 14/139 (10%)
Query: 3 SRPKHFPPGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVAS 62
+R ++ PP P+ GH L K L +M + I V
Sbjct: 14 TRRRNEPPLDKGMIPWLGHALEFG----KDAAKFLTRMKEKHGD-IFTVRAAGLYITVLL 68
Query: 63 DEKSIRELLMKPQFQGRIDQVVSLVRVDFGEERGIIFTEGDLWQQQKRFFLRHLRDHGFG 122
D +L + L++ F I+ + ++++ H + G
Sbjct: 69 DSNCYDAVLSDVASLDQTSYAQVLMKRIFNM---ILPSHNPESEKKRA--EMHFQ----G 119
Query: 123 KRSEPLEVQLAAEIQDLIT 141
L + ++ L+T
Sbjct: 120 ASLTQLSNSMQNNLRLLMT 138
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein,
alternative splicing, cholesterol biosynthesis,
endoplasmic reticulum, heme, iron; HET: HEM KLN BCD;
2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Length = 461
Score = 137 bits (348), Expect = 8e-36
Identities = 44/199 (22%), Positives = 79/199 (39%), Gaps = 11/199 (5%)
Query: 314 DGDRETYFTEEQLK-LVIQDFTFPASNTISGQLGFLWQQFLLHPEVQTKIQEELDRVVGR 372
DG T++++ ++I +T S ++ +Q K E V G
Sbjct: 244 DGRP---LTDDEVAGMLIG-LLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGE 299
Query: 373 SELP-NLNHRAELHYTEATIREIMRYKTLVP--LSVPHKATEDANFMGYHVEKGTIMVPS 429
+ P + +L+ + I+E +R L P + + A GY + G + S
Sbjct: 300 NLPPLTYDQLKDLNLLDRCIKETLR---LRPPIMIMMRMARTPQTVAGYTIPPGHQVCVS 356
Query: 430 LYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFARQNMFMYVA 489
D W + +F P+R+L N +K +PFG G+ C GE FA + +
Sbjct: 357 PTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWS 416
Query: 490 GLLQNFTFSLPEGAKLPDD 508
+L+ + F L +G +
Sbjct: 417 TMLRLYEFDLIDGYFPTVN 435
Score = 41.1 bits (97), Expect = 6e-04
Identities = 17/111 (15%), Positives = 32/111 (28%), Gaps = 9/111 (8%)
Query: 4 RPKHFPPGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVASD 63
PP P+ GH ++ A K ++ F +
Sbjct: 8 AGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFS-----FTMVGKTFTYLLG 62
Query: 64 EKSIRELLMKPQFQGRIDQVVS-LVRVDFGEERGIIF-TEGDLWQQQKRFF 112
+ L + V S L FG +G+ + ++ +QK+
Sbjct: 63 SDAAALLFNSKNEDLNAEDVYSRLTTPVFG--KGVAYDVPNPVFLEQKKML 111
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic
resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus
megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A*
1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A*
2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A*
2ij3_A* 2ij4_A* 3hf2_A* ...
Length = 470
Score = 137 bits (348), Expect = 1e-35
Identities = 72/263 (27%), Positives = 104/263 (39%), Gaps = 40/263 (15%)
Query: 267 MKDITRLNDNLANYAKNSIRKKMDSFNEDTINSAVDAYIKMMKEAQADG----------- 315
M + R N + Y +N + + D +N VD I K +
Sbjct: 185 MNKLQRANPDDPAYDENKRQFQEDI---KVMNDLVDKIIADRKASGEQSDDLLTHMLNGK 241
Query: 316 DRET--YFTEEQLKLVIQD----FTFPASNTISGQLGFLWQQFLLHPEVQTKIQEELDRV 369
D ET +E I+ F T SG L F + +P V K EE RV
Sbjct: 242 DPETGEPLDDEN----IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV 297
Query: 370 VGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPH---KATEDANFMG-YHVEKGTI 425
+ +P+ +L Y + E +R L P + P A ED G Y +EKG
Sbjct: 298 LVD-PVPSYKQVKQLKYVGMVLNEALR---LWP-TAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 426 MVPSLYCLHNDPDIWG-DPENFRPERFLDSNGQLKKKDRT--LPFGFGKRLCPGETFARQ 482
++ + LH D IWG D E FRPERF + + PFG G+R C G+ FA
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERFENP----SAIPQHAFKPFGNGQRACIGQQFALH 408
Query: 483 NMFMYVAGLLQNFTFSLPEGAKL 505
+ + +L++F F +L
Sbjct: 409 EATLVLGMMLKHFDFEDHTNYEL 431
Score = 44.6 bits (106), Expect = 7e-05
Identities = 20/103 (19%), Positives = 39/103 (37%), Gaps = 9/103 (8%)
Query: 10 PGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVASDEKSIRE 69
P P + + + L+ +AL K+ +I F T S ++ I+E
Sbjct: 6 PQPKTF-GELKN---LPLLNTDKPVQALMKIADEL-GEIFKFEAPGRVTRYLSSQRLIKE 60
Query: 70 LLMKPQFQGRIDQVVSLVRVDFGEERGII--FTEGDLWQQQKR 110
+ +F + Q + VR G+ G+ +T W++
Sbjct: 61 ACDESRFDKNLSQALKFVRDFAGD--GLFTSWTHEKNWKKAHN 101
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid
complex, riken structural genomics/proteomics
initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus
subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Length = 417
Score = 133 bits (337), Expect = 1e-34
Identities = 42/200 (21%), Positives = 69/200 (34%), Gaps = 29/200 (14%)
Query: 307 MMKEAQADGDRETYFTEEQLKLVIQDFTFPASNTISGQLGFLWQQFLLHPEVQTKIQEEL 366
M Q DG + + IS L F HP+ + ++
Sbjct: 217 MAFHTQEDGS---QLDSRMAAIEL-INVLRPIVAISYFLVFSALALHEHPKYKEWLRSG- 271
Query: 367 DRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIM 426
E ++E+ RY P + +D + +KGT +
Sbjct: 272 ----------------NSREREMFVQEVRRYYPFGPF-LGALVKKDFVWNNCEFKKGTSV 314
Query: 427 VPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRTLPFGFG----KRLCPGETFARQ 482
+ LY ++DP +W P+ FRPERF + + +P G G CPGE +
Sbjct: 315 LLDLYGTNHDPRLWDHPDEFRPERFAERE---ENLFDMIPQGGGHAEKGHRCPGEGITIE 371
Query: 483 NMFMYVAGLLQNFTFSLPEG 502
M + L+ + +PE
Sbjct: 372 VMKASLDFLVHQIEYDVPEQ 391
Score = 47.4 bits (113), Expect = 7e-06
Identities = 15/104 (14%), Positives = 32/104 (30%), Gaps = 9/104 (8%)
Query: 10 PGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVASDEKSIRE 69
P + L++L + + Y S + L + + ++ +
Sbjct: 6 PHD----KSLDNSLTLLK----EGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKV 57
Query: 70 LLMKPQFQGRIDQVVSLVRVDFGEERGIIFTEGDLWQQQKRFFL 113
+FQ + + + FG I +G +K FL
Sbjct: 58 FYDTDRFQRQNALPKRVQKSLFG-VNAIQGMDGSAHIHRKMLFL 100
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme,
oxidoreductase, monooxygenase, sterol biosynthesis,
lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A
{Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A*
2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Length = 450
Score = 124 bits (314), Expect = 4e-31
Identities = 37/167 (22%), Positives = 62/167 (37%), Gaps = 15/167 (8%)
Query: 340 TISGQLGFLWQQFLLHPEV--QTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRY 397
T S + + V +++E++ + L N E+ + E RE +R
Sbjct: 268 TSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQ--LNYNNVMDEMPFAERCARESIR- 324
Query: 398 KTLVP--LSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSN 455
P L + K D Y V KG I+ S H+D + + +P + PER
Sbjct: 325 --RDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVE 382
Query: 456 GQLKKKDRTLPFGFGKRLCPGETFARQNMFMYVAGLLQNFTFSLPEG 502
G + FG G C G+ F + +A +++ F L
Sbjct: 383 GAF------IGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD 423
Score = 47.3 bits (113), Expect = 8e-06
Identities = 17/104 (16%), Positives = 28/104 (26%), Gaps = 5/104 (4%)
Query: 9 PPGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVASDEKSIR 68
PP + P GH + + + R KS I + + D
Sbjct: 5 PPVYPVTVPILGHIIQFG----KSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHS 60
Query: 69 ELLMKPQFQGRIDQVVSLVRVDFGEERGIIFTEGDLWQQQKRFF 112
+ +V S + FGE ++Q F
Sbjct: 61 RFFLPRNEVLSPREVYSFMVPVFGEG-VAYAAPYPRMREQLNFL 103
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase,
oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas
paucimobilis} PDB: 3awq_A* 3awp_A*
Length = 415
Score = 123 bits (310), Expect = 6e-31
Identities = 40/197 (20%), Positives = 70/197 (35%), Gaps = 30/197 (15%)
Query: 312 QADGDRETYFTEEQLKLVIQDFTFPASNTISGQLGFLWQQFLLHPEVQTKIQEELDRVVG 371
DR + V + I+ + F+ ++ + ++ D
Sbjct: 217 AWHRDRHDDLLSPHVAAVELVNVLRPTVAIAVYITFVAHALQTCSGIRAALVQQPD---- 272
Query: 372 RSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLY 431
Y E ++E+ R+ P V +A++D + G +G +V LY
Sbjct: 273 --------------YAELFVQEVRRFYPFFPA-VVARASQDFEWEGMAFPEGRQVVLDLY 317
Query: 432 CLHNDPDIWGDPENFRPERFLDSNGQLKKKDRT--LPFGFG----KRLCPGETFARQNMF 485
++D W DP+ FRPERF +D +P G G CPGE M
Sbjct: 318 GSNHDAATWADPQEFRPERFRAW-----DEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMK 372
Query: 486 MYVAGLLQNFTFSLPEG 502
+ L+ + +P+
Sbjct: 373 VAAHLLVNAMRYDVPDQ 389
Score = 52.8 bits (127), Expect = 2e-07
Identities = 19/132 (14%), Positives = 45/132 (34%), Gaps = 11/132 (8%)
Query: 9 PPGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVASDEKSIR 68
P P LS+L ++ +++ C+ + T K+
Sbjct: 2 PKTPHT--KGPDETLSLLA----DPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE 55
Query: 69 ELLMKPQFQGRIDQVVSLVRVDFGEERGIIFTEGDLWQQQKRFFLRHLRDHGFGKRSEPL 128
+F+ V++ + G + G+ +G+ + +K+ F+ + +R L
Sbjct: 56 IFYDTTRFEREGAMPVAIQKTLLG-QGGVQGLDGETHRHRKQMFMGLMT----PERVRAL 110
Query: 129 EVQLAAEIQDLI 140
AE + +
Sbjct: 111 AQLFEAEWRRAV 122
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold,
hemoprotein, monoo cytochrome P450 reductase,
endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo
sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A*
1tqn_A* 3ua1_A* 3tjs_A*
Length = 485
Score = 122 bits (308), Expect = 3e-30
Identities = 83/293 (28%), Positives = 134/293 (45%), Gaps = 27/293 (9%)
Query: 221 PFFGYMKDITRLNDNLANYAKFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLANY 280
PF K + R + + +P ++T PF L P + I + N+
Sbjct: 180 PFVENTKKLLRFD---------FLDPFFLSITVFPF---LIPILEVLN-ICVFPREVTNF 226
Query: 281 AKNSIRKKMDSFNEDTINSAVDAYIKMMKEAQADGDRETYFTEEQLKLVIQDFTFPA--S 338
+ S+++ +S EDT VD ++++M ++Q + E++ L+LV Q F
Sbjct: 227 LRKSVKRMKESRLEDTQKHRVD-FLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGY 285
Query: 339 NTISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYK 398
T S L F+ + HP+VQ K+QEE+D V+ P + ++ Y + + E +R
Sbjct: 286 ETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLF 345
Query: 399 TLVPLSVPHKATEDANFMGYHVEKGT-IMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQ 457
+ + +D G + KG +M+P Y LH DP W +PE F PERF N
Sbjct: 346 PIAMR-LERVCKKDVEINGMFIPKGVVVMIP-SYALHRDPKYWTEPEKFLPERFSKKN-- 401
Query: 458 LKKKDRT----LPFGFGKRLCPGETFARQNMFMYVAGLLQNFTFSLPEGAKLP 506
K + PFG G R C G FA NM + + +LQNF+F + ++P
Sbjct: 402 --KDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIP 452
Score = 31.0 bits (71), Expect = 1.0
Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 10/72 (13%)
Query: 6 KHFPPGPSLWFPYYGHFLSILFLHYHHTHKALAKMCRIYKSKILGFYLGPFPTVVASDEK 65
P P+ G+ LS + + Y K+ GFY G P + +D
Sbjct: 17 PGPTP-----LPFLGNILSYH----KGFCMFDMECHKKYG-KVWGFYDGQQPVLAITDPD 66
Query: 66 SIRELLMKPQFQ 77
I+ +L+K +
Sbjct: 67 MIKTVLVKECYS 78
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty
acid biosynthesis, heme, iron, lipid synthesis, lyase,
metal-binding; HET: HEM; 1.80A {Parthenium argentatum}
PDB: 3dam_A* 3dbm_A*
Length = 473
Score = 117 bits (294), Expect = 1e-28
Identities = 47/331 (14%), Positives = 100/331 (30%), Gaps = 41/331 (12%)
Query: 217 KYLPPFFGYMKD-ITRLNDNLANYAKFYTEPLAGTLTF--------------VPFAKYLP 261
+ +P F + L LA K + F P
Sbjct: 136 RVIPQFETTYTELFEGLEAELAKNGKAAFNDVGEQAAFRFLGRAYFNSNPEETKLGTSAP 195
Query: 262 PFFG---YMKDITRLNDNLANYAKNSIRKKM---DSFNEDTINSAVDAYIKMMKEAQADG 315
L+ L + + + + T N D + +
Sbjct: 196 TLISSWVLFNLAPTLDLGLPWFLQEPLLHTFRLPAFLIKSTYNKLYDYFQSVATPVMEQA 255
Query: 316 DRETYFTEEQLKLVIQDFTFPASNTISGQLGF-LWQQFLLHPEVQTKIQEELDRVVGRSE 374
++ +E + ++ F + L L + T++ EE+ +
Sbjct: 256 EKLGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYG 315
Query: 375 LPNLNHRA--ELHYTEATIREIMRYKTLVPLSVPHKATEDANFMG----YHVEKGTIMVP 428
N+ A ++ T++ + E +R + VP KA + + V+KG ++
Sbjct: 316 DGNVTLEAIEQMPLTKSVVYESLRIEPPVPP-QYGKAKSNFTIESHDATFEVKKGEMLFG 374
Query: 429 SLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRTLPFGFG---------KRLCPGETF 479
DP ++ PE + P+RF+ + + + + G + C G+ F
Sbjct: 375 YQPFATKDPKVFDRPEEYVPDRFVGDG---EALLKYVWWSNGPETESPTVENKQCAGKDF 431
Query: 480 ARQNMFMYVAGLLQNFTFSLPEGAKLPDDSK 510
++V L + + E + P +
Sbjct: 432 VVLITRLFVIELFRRYDSFEIELGESPLGAA 462
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid
biosynthesis, heme, iron, synthesis, lyase,
metal-binding, oxylipin biosynthesis; HET: HEM T25;
1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A*
3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Length = 495
Score = 115 bits (288), Expect = 1e-27
Identities = 34/219 (15%), Positives = 79/219 (36%), Gaps = 14/219 (6%)
Query: 301 VDAYIKMMKEAQADGDRETYFTEEQLKLVIQDFTFPASNTISGQLGFLWQQFL-LHPEVQ 359
+ +++ E + D+ EE ++ F + + ++ +V
Sbjct: 259 YEFFLESAGEILVEADKLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVH 318
Query: 360 TKIQEELDRVVGRS-ELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHKATEDANF--- 415
++ EE+ V+ + + ++ T++ + E +R++ V +A +D
Sbjct: 319 NRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTA-QYGRAKKDLVIESH 377
Query: 416 -MGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRTLPFGF----- 469
+ V+ G ++ DP I+ + F PERF+ G+ + G
Sbjct: 378 DAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETP 437
Query: 470 --GKRLCPGETFARQNMFMYVAGLLQNFTFSLPEGAKLP 506
G + C G+ F ++V + + + E P
Sbjct: 438 TVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEVGTSP 476
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus
thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Length = 389
Score = 110 bits (278), Expect = 1e-26
Identities = 36/165 (21%), Positives = 58/165 (35%), Gaps = 27/165 (16%)
Query: 340 TISGQLGFLWQQFLL--HPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRY 397
T++ L + + LL P+ Q ++ E + + +E +R
Sbjct: 225 TVASALTWSF--LLLSHRPDWQKRVAESEEAALA------------------AFQEALRL 264
Query: 398 KTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQ 457
+ + + + GT +V S Y + D E FRPERFL+ G
Sbjct: 265 YPPAWI-LTRRLERPLLLGEDRLPPGTTLVLSPYVTQRLH--FPDGEAFRPERFLEERG- 320
Query: 458 LKKKDRTLPFGFGKRLCPGETFARQNMFMYVAGLLQNFTFSLPEG 502
R PFG G+RLC G FA + + + F
Sbjct: 321 -TPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPF 364
Score = 41.8 bits (99), Expect = 4e-04
Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
Query: 51 FYLGPFPTVVASDEKSIRELLMKPQFQGRIDQVVSLVRVDFGEERGIIFTEGDLWQQQKR 110
L FP + D + + L+ Q +L R+ G G++ G+ W++ ++
Sbjct: 36 LPLPRFPLALIFDPEGVEGALLAEGTTKATFQYRALSRL-TGR--GLLTDWGESWKEARK 92
Query: 111 -----FFLRHLRD 118
F +++R
Sbjct: 93 ALKDPFLPKNVRG 105
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 72.2 bits (176), Expect = 2e-13
Identities = 82/582 (14%), Positives = 161/582 (27%), Gaps = 205/582 (35%)
Query: 29 HYHHTHKALAKMCRIYKSKILGFYLGPF------------PTVVASDEKSIRELLMKP-- 74
H+HH + YK IL + F P + S E+ I ++M
Sbjct: 3 HHHHMDFETGEHQYQYK-DILSVFEDAFVDNFDCKDVQDMPKSILSKEE-IDHIIMSKDA 60
Query: 75 --------------------QFQGRIDQV---------------VSLVRVDFGEER---- 95
+F + ++ S++ + E+R
Sbjct: 61 VSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120
Query: 96 --GIIFTEGDLWQQQK----RFFLRHLRDH---------GFGKRSEPLEVQLAAEIQDLI 140
+F + ++ + Q R L LR G GK L+V L+ ++Q +
Sbjct: 121 NDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKM 180
Query: 141 TF------LREERNHPA---------YQNGLALIPSIFAWGNIALLMSALTGEK---FTG 182
F L+ + YQ NI L + ++ E
Sbjct: 181 DFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240
Query: 183 REGKDTL---SDI----HWNALNFQ---FYTEPLAGTLTFVPFAKYLPPFFGYMKDITRL 232
+ ++ L ++ WNA N T F+ A L
Sbjct: 241 KPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHI---------SL 291
Query: 233 NDNLANYAKFYTEPLAGTLTFVPFAKY-------LP-------PF----FG-YMKDITRL 273
+ + + L KY LP P ++D
Sbjct: 292 DHHSMTLTPDEVKSL--------LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT 343
Query: 274 NDNLANYAKNSIRKKMDSFNEDTINSAVDAYIKMMKEAQADGDRETYFTEEQLKLVIQDF 333
DN + N D + + +++ + +++ A+ R+ + +L +
Sbjct: 344 WDNWKHV------------NCDKLTTIIESSLNVLEPAE---YRKMFD-----RLSV--- 380
Query: 334 TFPASNTISGQ-LGFLWQQFLLHPEVQTKIQEEL--------DRVVGRSELPNL------ 378
FP S I L +W + + +L +P++
Sbjct: 381 -FPPSAHIPTILLSLIWFD--VIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKV 437
Query: 379 --NHRAELHYTEATIREIMRYKTL--VPLSVPHKATED---ANFMGYHVEKG-----TIM 426
+ LH +I + Y D + +G+H++ +
Sbjct: 438 KLENEYALH---RSIVD--HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTL 492
Query: 427 VPSLYC--------LHNDPDIWGDPENFRPERFLDSNGQLKK 460
++ + +D W + L++ QLK
Sbjct: 493 FRMVFLDFRFLEQKIRHDSTAWNASGS-----ILNTLQQLKF 529
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR,
atomic resolutio structural genomics/proteomics
initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum}
SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A*
1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A*
1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Length = 404
Score = 54.2 bits (131), Expect = 5e-08
Identities = 23/101 (22%), Positives = 37/101 (36%), Gaps = 7/101 (6%)
Query: 381 RAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIW 440
+A + E+ RY T L++ A ED V ++ S + D +++
Sbjct: 267 KANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVF 326
Query: 441 GDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
+P+ F R L FGFG C E A+
Sbjct: 327 ENPDEFNMNRKWPPQDPLG-------FGFGDHRCIAEHLAK 360
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 55.1 bits (132), Expect = 5e-08
Identities = 91/536 (16%), Positives = 158/536 (29%), Gaps = 180/536 (33%)
Query: 55 PFPT--VVASDE-KSIRELLMK----------PQFQGRIDQVVSLVRVDFGEERGIIFTE 101
P PT A DE + EL+ K P G+ DQV++L +F E
Sbjct: 42 PEPTEGFAADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEF--ENC----- 94
Query: 102 GDLWQQQKRFFLRHLRD-HGFGKRSEPLEVQLAAEIQDLITFLREERNHPAYQNGLALIP 160
+L D H + + ++LI Y +
Sbjct: 95 ----------YLEG-NDIHALAAKLLQENDTTLVKTKELIK---------NYITARIMAK 134
Query: 161 -SIFAWGNIALLMSALTGEK-----FTGREGK-----DTLSDIHWNALNFQFYTEPLAGT 209
N AL + G F G +G + L D+ +Q Y L G
Sbjct: 135 RPFDKKSNSALFRAVGEGNAQLVAIFGG-QGNTDDYFEELRDL------YQTY-HVLVGD 186
Query: 210 LTFVPFAKYL----------PPFFGYMKDITR-LN--------DNLANYAKFYTEPLAGT 250
L A+ L F +I L D L + + PL G
Sbjct: 187 L-IKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIP--ISCPLIG- 242
Query: 251 LT----FVPFAKYL--PP--FFGYMKDITRLNDNLANYAKNSIRKKMDSFNEDTINSAVD 302
+ +V AK L P Y+K T + L + +SF ++ A+
Sbjct: 243 VIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESF-FVSVRKAIT 301
Query: 303 A--YI---------------KMMKEAQADGD-RETY------FTEEQLKLVIQDF--TFP 336
+I +++++ + + + T+EQ++ + P
Sbjct: 302 VLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLP 361
Query: 337 ASNTISGQL--GFLWQQFLL--HPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIR 392
A + L G + ++ P+ + L + S L R ++E ++
Sbjct: 362 AGKQVEISLVNGA--KNLVVSGPPQSLYGLNLTLRKAKAPSGLD--QSRIP--FSERKLK 415
Query: 393 EIMRYKTLVPLSVP-H-----KATE---------DANFMG-------YHVEKGTIM---- 426
R+ +P++ P H A++ + +F Y G+ +
Sbjct: 416 FSNRF---LPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLS 472
Query: 427 ---VPSLY-CLHNDPDIWGDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGET 478
+ C+ P W F+ LD FG PG
Sbjct: 473 GSISERIVDCIIRLPVKWETTTQFKATHILD-------------FG------PGGA 509
Score = 37.0 bits (85), Expect = 0.019
Identities = 38/252 (15%), Positives = 75/252 (29%), Gaps = 78/252 (30%)
Query: 154 NGLALIPSIFAWGNI--ALLMSALTGEKFTGREGKDTLSDIHWNA--LNFQFY------T 203
+ + P + G++ LL+ + A L QF T
Sbjct: 2 DAYSTRPLTLSHGSLEHVLLVPT----------------ASFFIASQLQEQFNKILPEPT 45
Query: 204 EPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLANYAKFYTEPLAGTL-----TFVP--- 255
E A A+ + F GY ++ L + + + L L ++
Sbjct: 46 EGFAADDEPTTPAELVGKFLGY---VSSLVEPSKVGQ--FDQVLNLCLTEFENCYLEGND 100
Query: 256 ---FAKYLPPFFGYMKDITRLNDNLANY--AKNSIRKKMDSFNEDTINSAVDAYIKMMKE 310
A L + + + + NY A+ ++ D + + AV
Sbjct: 101 IHALAAKLLQEND--TTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGE-----GN 153
Query: 311 A--------QADGDRETYFTEEQL-----KLVIQDFTFPASNTISG------------QL 345
A Q G+ + YF E + +++ D ++ T+S
Sbjct: 154 AQLVAIFGGQ--GNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQ 211
Query: 346 GFLWQQFLLHPE 357
G ++L +P
Sbjct: 212 GLNILEWLENPS 223
Score = 35.4 bits (81), Expect = 0.060
Identities = 47/232 (20%), Positives = 70/232 (30%), Gaps = 63/232 (27%)
Query: 65 KSIRELLMKPQFQGRIDQVVSLVRV--DFGEE-RGIIFT--EGDLWQ---QQKRFFL--- 113
K IRE F+ +D + ++ + E F +G L Q L
Sbjct: 1682 KRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEK 1741
Query: 114 ---RHLRDHGFGKRSEPL------E-VQLAA-----EIQDLI--TFLR-------EERNH 149
L+ G E LA+ I+ L+ F R R+
Sbjct: 1742 AAFEDLKSKGLIPADATFAGHSLGEYAALASLADVMSIESLVEVVFYRGMTMQVAVPRDE 1801
Query: 150 PAYQNG--LALIPSIFAWGNIALLMSALTGEKFTGREGKDT---LSDIHWNALNFQFYTE 204
N +A+ P G +A S + R GK T + +++N N Q Y
Sbjct: 1802 LGRSNYGMIAINP-----GRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQ-YV- 1854
Query: 205 PLAGTL----TFVPFAKYLPPFFGYMK-DITRLNDNLANYAKFYTEPLAGTL 251
AG L T ++ K DI L E + G L
Sbjct: 1855 -AAGDLRALDTVTNVLNFI----KLQKIDIIELQK------SLSLEEVEGHL 1895
Score = 33.9 bits (77), Expect = 0.18
Identities = 23/143 (16%), Positives = 35/143 (24%), Gaps = 72/143 (50%)
Query: 302 DAYIKMMKEAQADGDRETYFTEEQLKLVIQDFTFPASNTISGQLGFLWQQFLLHPEVQTK 361
+ Y M+ E DG +T +++ +TF +
Sbjct: 1686 ENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFR------------------SEK---- 1723
Query: 362 IQEELDRVVGRSELPNLNHRAELHYTEAT----------IREIMRYKTLVPLSVPHKATE 411
L T+ T E ++ K L+P
Sbjct: 1724 --GLLSA------------------TQFTQPALTLMEKAAFEDLKSKGLIP--------A 1755
Query: 412 DANFMGYHVEKGTIMVPSL--YC 432
DA F G H SL Y
Sbjct: 1756 DATFAG-H---------SLGEYA 1768
Score = 31.6 bits (71), Expect = 0.83
Identities = 24/115 (20%), Positives = 37/115 (32%), Gaps = 35/115 (30%)
Query: 22 FLSIL--FLHYHHTHKALAKMCRIYKSKILGF---YLG-P-FPTVVASD----EKSIREL 70
FL + F H H A + + + F + P + T SD SI E
Sbjct: 420 FLPVASPF-HSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISER 478
Query: 71 LMKPQFQGRIDQVVSLVRVDFGEERGIIFTEGDLWQQQKRFFLRHLRDHGFGKRS 125
+ +D ++ L V W+ +F H+ D G G S
Sbjct: 479 I--------VDCIIRL-PVK--------------WETTTQFKATHILDFGPGGAS 510
Score = 29.6 bits (66), Expect = 2.8
Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 7/91 (7%)
Query: 258 KYLPPFFGY-MKDITRLN-DNLANYAK----NSIRKKMDSFNEDTINSAVDAYIKMMKEA 311
+ +G+ + DI N NL + IR+ + +TI K+ KE
Sbjct: 1651 NHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLKTEKIFKEI 1710
Query: 312 QADGDRETYFTEEQLKLVIQDFTFPASNTIS 342
T+ +E+ L L FT PA +
Sbjct: 1711 NEHSTSYTFRSEKGL-LSATQFTQPALTLME 1740
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding,
monooxygenase, oxidoreductase; HET: HEM; 1.50A
{Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A*
3cv9_A*
Length = 412
Score = 53.4 bits (129), Expect = 9e-08
Identities = 23/101 (22%), Positives = 39/101 (38%), Gaps = 9/101 (8%)
Query: 381 RAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIW 440
RA+ + E++RY + ++ AT D G + G ++ + D ++
Sbjct: 271 RADRSLVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVY 330
Query: 441 GDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
DP+ R + L FGFG C G+ AR
Sbjct: 331 EDPDALDIHR--SARHHLA-------FGFGVHQCLGQNLAR 362
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET:
HEM; 2.90A {Streptomyces coelicolor}
Length = 417
Score = 52.6 bits (127), Expect = 1e-07
Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 9/101 (8%)
Query: 381 RAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIW 440
R + A + E++R ++ A ED G V ++ L ++DP+ +
Sbjct: 276 RKDPDLMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQF 335
Query: 441 GDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
DPE R N + FG+G C G+ AR
Sbjct: 336 DDPERVDFHR--TDNHHVA-------FGYGVHQCVGQHLAR 367
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105,
oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea
recticatena}
Length = 413
Score = 52.2 bits (126), Expect = 2e-07
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 9/101 (8%)
Query: 381 RAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIW 440
+A T + E++RY T+ ATED G ++ G ++ S+ + DP ++
Sbjct: 272 KANPGRTPMAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVF 331
Query: 441 GDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
DP ER + L FGFG C G+ AR
Sbjct: 332 KDPAVLDVER--GARHHLA-------FGFGPHQCLGQNLAR 363
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A
{Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Length = 416
Score = 51.9 bits (125), Expect = 2e-07
Identities = 30/142 (21%), Positives = 52/142 (36%), Gaps = 26/142 (18%)
Query: 340 TISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKT 399
T + QL F HP+ + ++ EL + E++R+
Sbjct: 257 TTNHQLALAMYDFAQHPD-------QWMKIKENPEL-----------APQAVEEVLRWSP 298
Query: 400 LVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLK 459
+P++ A ED G + GT + + H DP ++ D + F K
Sbjct: 299 TLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITV--------K 350
Query: 460 KKDRTLPFGFGKRLCPGETFAR 481
++ ++ FG G C G AR
Sbjct: 351 REAPSIAFGGGPHFCLGTALAR 372
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase,
heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A
{Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A*
1pkf_A*
Length = 419
Score = 51.9 bits (125), Expect = 3e-07
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 381 RAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIW 440
+AE + E++R+ ++ + A +D + G ++KG ++ + D ++
Sbjct: 281 KAEPGLMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVF 340
Query: 441 GDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
P+ F R D++ L +G G +CPG + AR
Sbjct: 341 SRPDVFDVRR--DTSAS-------LAYGRGPHVCPGVSLAR 372
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide,
filipi metal-binding, oxidoreductase-antibiotic complex;
HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB:
3e5j_A* 3e5k_A* 3e5l_A*
Length = 403
Score = 51.8 bits (125), Expect = 3e-07
Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 9/101 (8%)
Query: 381 RAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIW 440
R + + E++RY T+ AT D G + KG +V + DP
Sbjct: 264 REDPSLVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFV 323
Query: 441 GDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
+PE F R L FGFG C G+ AR
Sbjct: 324 EEPERFDITR--RPAPHLA-------FGFGAHQCIGQQLAR 355
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450
vancomycin, oxidoreductase; HET: HEM; 1.70A
{Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A*
1lgf_A*
Length = 398
Score = 51.9 bits (125), Expect = 3e-07
Identities = 34/142 (23%), Positives = 52/142 (36%), Gaps = 27/142 (19%)
Query: 340 TISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKT 399
ISG +G L HPE ++D G + + + E++RY T
Sbjct: 240 NISGMIGLGVLAMLRHPE-------QIDAFRGDEQS-----------AQRAVDELIRYLT 281
Query: 400 LVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLK 459
+ P A ED G ++KG ++ SL + DP + D + R +
Sbjct: 282 VPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTR--EPIPH-- 337
Query: 460 KKDRTLPFGFGKRLCPGETFAR 481
+ FG G C G AR
Sbjct: 338 -----VAFGHGVHHCLGAALAR 354
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide
monooxygenase, antibiotic biosynthesis, heme, iron,
metal-binding; HET: HEM PXI; 1.7A {Streptomyces
venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A*
2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Length = 436
Score = 51.9 bits (125), Expect = 3e-07
Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 9/101 (8%)
Query: 381 RAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIW 440
RA++ + + E++RY+ V + E + G + G ++ L H P+ +
Sbjct: 290 RADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERF 349
Query: 441 GDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
DP F R D+ G L FG G C G AR
Sbjct: 350 PDPHRFDIRR--DTAGH-------LAFGHGIHFCIGAPLAR 381
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450
fold, structural genomics, PSI, protein structure
initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis}
SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A*
3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Length = 396
Score = 51.5 bits (124), Expect = 4e-07
Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 8/101 (7%)
Query: 381 RAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIW 440
+ A + E++R +P AT D V KG +++ L + DP+ +
Sbjct: 260 HEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHF 319
Query: 441 GDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
+P + +R L FG G+ CPG R
Sbjct: 320 PNPGSIELDR--------PNPTSHLAFGRGQHFCPGSALGR 352
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase,
cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Length = 381
Score = 50.8 bits (122), Expect = 5e-07
Identities = 13/101 (12%), Positives = 33/101 (32%), Gaps = 10/101 (9%)
Query: 381 RAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIW 440
+ + T+ E++R + L AT + + + +G +V + + DP+++
Sbjct: 249 ADDPAAAQRTVAEVLRLHPALHL-ERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVF 307
Query: 441 GDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
+P+ +R + E
Sbjct: 308 AEPDRLDVDR--PDADR-------ALSAHRGHPGRLEELVT 339
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin
biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A
{Amycolatopsis orientalis} SCOP: a.104.1.1
Length = 406
Score = 51.1 bits (123), Expect = 5e-07
Identities = 22/101 (21%), Positives = 37/101 (36%), Gaps = 9/101 (8%)
Query: 381 RAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIW 440
E + E++RY + V P A +D G ++ G ++ S+ + D +
Sbjct: 272 FESPEKAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALT 331
Query: 441 GDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
DP+ R + + FG G C G AR
Sbjct: 332 PDPDVLDANR--AAVSD-------VGFGHGIHYCVGAALAR 363
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox
oxidoreductase; HET: HEM; 1.75A {Pseudonocardia
autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Length = 411
Score = 50.3 bits (121), Expect = 9e-07
Identities = 21/101 (20%), Positives = 39/101 (38%), Gaps = 9/101 (8%)
Query: 381 RAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIW 440
+ + + E +R+ + V + ED + G + G +++ L + D D
Sbjct: 263 AEDPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWM 322
Query: 441 GDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
+P+ R D++G + FG G C G AR
Sbjct: 323 PEPDRLDITR--DASGG-------VFFGHGIHFCLGAQLAR 354
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron,
metal-binding, oxidoreductase, substrate-soaking,
cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB:
1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A*
2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A*
1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Length = 415
Score = 50.0 bits (120), Expect = 1e-06
Identities = 35/178 (19%), Positives = 62/178 (34%), Gaps = 32/178 (17%)
Query: 340 TISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKT 399
T+ L F + PE + ++ E +R+ A E++R +
Sbjct: 253 TVVNFLSFSMEFLAKSPEHRQELIERPERI------------------PAACEELLRRFS 294
Query: 400 LVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHN-DPDIWGDPENFRPERFLDSNGQL 458
++ T D F G ++KG ++ L D P + R
Sbjct: 295 --LVADGRILTSDYEFHGVQLKKGDQILLP-QMLSGLDERENACPMHVDFSR--QKVSH- 348
Query: 459 KKKDRTLPFGFGKRLCPGETFARQNMFMYVAGLLQNF-TFSLPEGAKLPDDSKYIPGL 515
FG G LC G+ AR+ + + + L FS+ GA++ S + G+
Sbjct: 349 ------TTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQHKSGIVSGV 400
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2,
anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A
{Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A*
2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Length = 406
Score = 48.8 bits (117), Expect = 2e-06
Identities = 36/177 (20%), Positives = 56/177 (31%), Gaps = 42/177 (23%)
Query: 311 AQADGDRETYFTEEQLK-----LVIQDFTFPASNTISGQLGFLWQQFLLHPEVQTKIQEE 365
A D T + L I ++ G ++ L PE
Sbjct: 220 AAVGRDE---ITLSEAVGLAVLLQI------GGEAVTNNSGQMFHLLLSRPE-------L 263
Query: 366 LDRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVPL-SVPHKATEDANFMGYHVEKGT 424
+R+ E+ I E++R+ + A ED G + G
Sbjct: 264 AERLRSEPEI-----------RPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGD 312
Query: 425 IMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
+ S + DP+++ DP+ ER N + FGFG CPG AR
Sbjct: 313 AVYVSYLAANRDPEVFPDPDRIDFER--SPNPHVS-------FGFGPHYCPGGMLAR 360
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme,
monooxygenase, macrolide, filipi metal-binding; HET:
HEM; 2.30A {Streptomyces avermitilis}
Length = 408
Score = 48.8 bits (117), Expect = 3e-06
Identities = 19/101 (18%), Positives = 41/101 (40%), Gaps = 10/101 (9%)
Query: 381 RAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIW 440
+ + E++R+ ++ + A ED G ++ G ++ S+ ++ D +
Sbjct: 270 LRDPGAVSGVVEELLRFTSVSD-HIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAY 328
Query: 441 GDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
+P+ F R ++ + FG G C G+ AR
Sbjct: 329 ENPDIFDARR--NARHHV-------GFGHGIHQCLGQNLAR 360
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A
{Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Length = 411
Score = 48.4 bits (116), Expect = 3e-06
Identities = 24/102 (23%), Positives = 39/102 (38%), Gaps = 10/102 (9%)
Query: 381 RAELHYTEATIREIMRYKTLVP-LSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDI 439
R + E++R+ + + + A ED G + G + S + DPD+
Sbjct: 271 RERPGARGTALDELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDV 330
Query: 440 WGDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
+ DP+ +R D N L +G G C G AR
Sbjct: 331 FPDPDRIDLDR--DPNPHLA-------YGNGHHFCTGAVLAR 363
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A
{Streptomyces natalensis} PDB: 2x9p_A*
Length = 404
Score = 48.0 bits (115), Expect = 4e-06
Identities = 25/102 (24%), Positives = 37/102 (36%), Gaps = 10/102 (9%)
Query: 381 RAELHYTEATIREIMRYKTLVP-LSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDI 439
A+ + E++R + P A+ED F G + G +++ L + D
Sbjct: 268 LADPDVMARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERA 327
Query: 440 WGDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
+ PE F R N L FG G C G AR
Sbjct: 328 FTGPEEFDAAR--TPNPHLT-------FGHGIWHCIGAPLAR 360
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent,
mono-oxygenases, oxidoreductase; HET: HEM; 2.00A
{Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Length = 417
Score = 47.7 bits (114), Expect = 5e-06
Identities = 31/166 (18%), Positives = 54/166 (32%), Gaps = 32/166 (19%)
Query: 340 TISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKT 399
T+ L F HPE+ +++ + ++ E+ R
Sbjct: 259 TVVNFLSFFMIHLARHPELVAELRSDPLKL------------------MRGAEEMFRRFP 300
Query: 400 LVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHN-DPDIWGDPENFRPERFLDSNGQL 458
+V S +D + G +++G +++ LH D +P R S
Sbjct: 301 VV--SEARMVAKDQEYKGVFLKRGDMILLP-TALHGLDDAANPEPWKLDFSR--RSISH- 354
Query: 459 KKKDRTLPFGFGKRLCPGETFARQNMFMYVAGLLQNF-TFSLPEGA 503
FG G C G AR + + + L+ FS EG
Sbjct: 355 ------STFGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEGE 394
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans} PDB: 3lxi_A*
Length = 421
Score = 47.7 bits (114), Expect = 6e-06
Identities = 27/143 (18%), Positives = 44/143 (30%), Gaps = 31/143 (21%)
Query: 340 TISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKT 399
T+ LGF+ HPE +++ E ++ + + E+ R
Sbjct: 260 TVVNFLGFMMIYLSRHPETVAEMRREPLKL------------------QRGVEELFRRFA 301
Query: 400 LVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHN-DPDIWGDPENFRPERFLDSNGQL 458
+S D F G +++G +++ LH D DP R
Sbjct: 302 --VVSDARYVVSDMEFHGTMLKEGDLILLP-TALHGLDDRHHDDPMTVDLSR--RDVTH- 355
Query: 459 KKKDRTLPFGFGKRLCPGETFAR 481
F G C G AR
Sbjct: 356 ------STFAQGPHRCAGMHLAR 372
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX,
bioremediation, electron transport; HET: HEM; 1.49A
{Rhodococcus} PDB: 2wiv_A*
Length = 394
Score = 47.6 bits (114), Expect = 6e-06
Identities = 28/144 (19%), Positives = 44/144 (30%), Gaps = 30/144 (20%)
Query: 338 SNTISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRY 397
I+ G F PE A I E++R
Sbjct: 239 GYLIAS--GIEL--FARRPE-------VFTAFRNDESA-----------RAAIINEMVRM 276
Query: 398 KTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQ 457
TED G +E G+ + + + DP+++ DP+ F R ++
Sbjct: 277 DPPQLS-FLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAASRN 335
Query: 458 LKKKDRTLPFGFGKRLCPGETFAR 481
L FG G C G+ +R
Sbjct: 336 -------LSFGLGPHSCAGQIISR 352
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase;
HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP:
a.104.1.1
Length = 408
Score = 47.3 bits (113), Expect = 7e-06
Identities = 22/102 (21%), Positives = 32/102 (31%), Gaps = 10/102 (9%)
Query: 381 RAELHYTEATIREIMRYKTLVPLSVPHKATEDANFM-GYHVEKGTIMVPSLYCLHNDPDI 439
R + E +R++ V A D G + +G ++ S + PD
Sbjct: 269 RKGEVTWADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDW 328
Query: 440 WGDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
D + F R L FG G C G AR
Sbjct: 329 HEDADTFDATR--TVKEH-------LAFGHGVHFCLGAPLAR 361
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis;
HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB:
2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Length = 417
Score = 47.2 bits (113), Expect = 7e-06
Identities = 22/102 (21%), Positives = 34/102 (33%), Gaps = 10/102 (9%)
Query: 381 RAELHYTEATIREIMRYKTLVP-LSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDI 439
+ + E+ R+ L + P A ED G + G ++ S + D
Sbjct: 281 LDRPELIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQ 340
Query: 440 WGDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
+ D + +R N L FG G C G AR
Sbjct: 341 FPDADRIDVDR--TPNQHLG-------FGHGVHHCLGAPLAR 373
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein,
oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB:
3nc5_A* 3nc6_A* 3nc7_A*
Length = 441
Score = 47.3 bits (113), Expect = 7e-06
Identities = 38/174 (21%), Positives = 66/174 (37%), Gaps = 25/174 (14%)
Query: 310 EAQADGDRETYFTEEQLKLVIQDFTFPASN-TISGQLGFLWQQFLLHPEVQTKIQEELDR 368
++ +G +++ + +I A+ L + L +PE + +
Sbjct: 246 TSEYEGMA---LSDKDILALIL-NVLLAATEPADKTLALMIYHLLNNPEQMNDVLAD--- 298
Query: 369 VVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVP 428
RS +P I E +RYK V L +P + ++D G ++K TI+
Sbjct: 299 ---RSLVPR------------AIAETLRYKPPVQL-IPRQLSQDTVVGGMEIKKDTIVFC 342
Query: 429 SLYCLHNDPDIWGDPENFRPER-FLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
+ + DP+ + P+ F R L R L FG G C G FA+
Sbjct: 343 MIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAK 396
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta
binding protein; HET: HEM; 2.47A {Micromonospora
echinospora}
Length = 397
Score = 46.8 bits (112), Expect = 9e-06
Identities = 23/101 (22%), Positives = 35/101 (34%), Gaps = 10/101 (9%)
Query: 381 RAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIW 440
R + E +RY V + D G + + ++V + DP +
Sbjct: 260 RRRPDLLAQAVEECLRYDPSVQS-NTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRY 318
Query: 441 GDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
P++F ER D + FG G R C G AR
Sbjct: 319 DRPDDFDIER--DPVPS-------MSFGAGMRYCLGSYLAR 350
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM
EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A*
3be0_A*
Length = 398
Score = 46.9 bits (112), Expect = 1e-05
Identities = 23/142 (16%), Positives = 40/142 (28%), Gaps = 29/142 (20%)
Query: 340 TISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKT 399
+ L ++ + E R++ EL + E++R+
Sbjct: 236 NTARFLSSVFWRLAWDIE-------LRRRLIAHPELI-----------PNAVDELLRFYG 277
Query: 400 LVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLK 459
P V T++ ++ G + D + P+N ER N
Sbjct: 278 --PAMVGRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIER--TPNRH-- 331
Query: 460 KKDRTLPFGFGKRLCPGETFAR 481
L G G C G R
Sbjct: 332 -----LSLGHGIHRCLGAHLIR 348
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein
complex, cytochrome P450 fold, carrier protein, 4-helix
bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus
subtilis} PDB: 3ejd_B* 3eje_B*
Length = 404
Score = 46.8 bits (112), Expect = 1e-05
Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 10/101 (9%)
Query: 381 RAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIW 440
R + E +RY++ + A+ED + G + +G + L + DP I+
Sbjct: 261 RENPDLIGTAVEECLRYESPTQM-TARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIF 319
Query: 441 GDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
+P+ F R N L FG G +C G + AR
Sbjct: 320 TNPDVFDITR--SPNPH-------LSFGHGHHVCLGSSLAR 351
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase,
oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus}
PDB: 2rfc_A*
Length = 343
Score = 46.4 bits (111), Expect = 1e-05
Identities = 25/143 (17%), Positives = 45/143 (31%), Gaps = 35/143 (24%)
Query: 339 NTISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYK 398
N I +P+ +D + E +RY
Sbjct: 195 NLIGN--MIRV--IDENPD-------IIDDA--LKNRSGF------------VEETLRYY 229
Query: 399 TLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQL 458
+ + A ED+ ++KG ++ L + D + +P+ F+ R
Sbjct: 230 SPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGR-------- 281
Query: 459 KKKDRTLPFGFGKRLCPGETFAR 481
++ L FG G +C G AR
Sbjct: 282 --REMHLAFGIGIHMCLGAPLAR 302
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12;
1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Length = 418
Score = 46.5 bits (111), Expect = 1e-05
Identities = 34/101 (33%), Positives = 40/101 (39%), Gaps = 10/101 (9%)
Query: 381 RAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIW 440
A+ A I E MRY V L V A +D + V KG M+ L H DP I
Sbjct: 283 AADGSRASAVIEETMRYDPPVQL-VSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIV 341
Query: 441 GDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
G P+ F P+R L FG G C G AR
Sbjct: 342 GAPDRFDPDR--AQIRH-------LGFGKGAHFCLGAPLAR 373
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A
{Novosphingobium aromaticivorans} PDB: 3ofu_A*
Length = 396
Score = 46.5 bits (111), Expect = 1e-05
Identities = 34/177 (19%), Positives = 57/177 (32%), Gaps = 28/177 (15%)
Query: 340 TISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKT 399
T++ +G + HPE + + R +L A E+MR
Sbjct: 238 TVAAMIGMVALHLARHPE-------DQRLLRERPDL-----------IPAAADELMRRYP 279
Query: 400 LVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLK 459
V +V A D + G + KG ++ + DP + PE R +R L
Sbjct: 280 TV--AVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLAPIRHTT 337
Query: 460 KKDRTLPFGFGKRLCPGETFARQNMFMYVAGLLQNF-TFSLPEGAKLPDDSKYIPGL 515
G G C G AR + +++ L F+L + +
Sbjct: 338 -------MGVGAHRCVGAGLARMEVIVFLREWLGGMPEFALAPDKAVTMKGGNVGAC 387
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme,
oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB:
2z3u_A* 3a1l_A*
Length = 425
Score = 46.1 bits (110), Expect = 2e-05
Identities = 29/101 (28%), Positives = 41/101 (40%), Gaps = 10/101 (9%)
Query: 381 RAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIW 440
R T A + E+MRY V V A ED + + +G+ +V L + DP +
Sbjct: 281 RTTPESTPAAVEELMRYDPPVQA-VTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARF 339
Query: 441 GDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
DP+ R + Q + FG G C G T AR
Sbjct: 340 PDPDVLDVHR--AAERQ-------VGFGLGIHYCLGATLAR 371
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin,
oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora
erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A*
1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Length = 404
Score = 45.7 bits (109), Expect = 2e-05
Identities = 27/129 (20%), Positives = 42/129 (32%), Gaps = 28/129 (21%)
Query: 353 LLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHKATED 412
L HP+ +L V + EI+RY A E+
Sbjct: 258 LTHPD-------QLALVRRDPSA-----------LPNAVEEILRYIAPPET-TTRFAAEE 298
Query: 413 ANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRTLPFGFGKR 472
G + + + ++ + + DP + DP F R D+ G L FG G
Sbjct: 299 VEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR--DTRGH-------LSFGQGIH 349
Query: 473 LCPGETFAR 481
C G A+
Sbjct: 350 FCMGRPLAK 358
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide
antibiotics, 12- and 14- carbon macrolactone
monooxygenase, heme; HET: HEM; 1.92A {Streptomyces
coelicolor} SCOP: a.104.1.1
Length = 411
Score = 45.3 bits (108), Expect = 3e-05
Identities = 22/102 (21%), Positives = 35/102 (34%), Gaps = 9/102 (8%)
Query: 381 RAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIW 440
+ A + E +R+ T + A ED + G ++ S L D
Sbjct: 269 LSGEAEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAH 328
Query: 441 G-DPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
G + F R +R + FG G +CPG +R
Sbjct: 329 GPTADRFDLTR--------TSGNRHISFGHGPHVCPGAALSR 362
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A
{Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A*
4dnz_A*
Length = 412
Score = 45.3 bits (108), Expect = 3e-05
Identities = 32/172 (18%), Positives = 57/172 (33%), Gaps = 31/172 (18%)
Query: 310 EAQADGDRETYFTEEQLKLVIQDFTFPASNTISGQLGFLWQQFLLHPEVQTKIQEELDRV 369
A +D T E+ L+++ +T + P+ E R+
Sbjct: 228 HAFSDTGE---ITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPD-------EFARL 277
Query: 370 VGRSELPNLNHRAELHYTEATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPS 429
L E +R+++ V T D G + +G ++
Sbjct: 278 RADPSL-----------ARNAFEEAVRFESPVQT-FFRTTTRDVELAGATIGEGEKVLMF 325
Query: 430 LYCLHNDPDIWGDPENFRPERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
L + DP W DP+ + R ++G + FG G +C G+ AR
Sbjct: 326 LGSANRDPRRWDDPDRYDITR--KTSGH-------VGFGSGVHMCVGQLVAR 368
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein,
vancomycin biosynthes carrier protein, oxidoreductase;
HET: HEM; 2.10A {Amycolatopsis balhimycina}
Length = 415
Score = 44.6 bits (106), Expect = 5e-05
Identities = 30/143 (20%), Positives = 46/143 (32%), Gaps = 32/143 (22%)
Query: 339 NTISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYK 398
+ I+G + P L + R + + E++R+
Sbjct: 261 HAITGAV----HALATVPG-------LLTAL-----------RDGSADVDTVVEEVLRWT 298
Query: 399 TLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQL 458
+ V T D G + GT +V L + DP + DP+ F P R N +
Sbjct: 299 SPAM-HVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGR--KPNRHI 355
Query: 459 KKKDRTLPFGFGKRLCPGETFAR 481
FG G C G AR
Sbjct: 356 T-------FGHGMHHCLGSALAR 371
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase,
metal-binding, AN biosynthesis, TIE-ROD mechanism of
action; HET: HEM; 1.59A {Saccharopolyspora erythraea}
PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Length = 411
Score = 43.8 bits (104), Expect = 1e-04
Identities = 31/142 (21%), Positives = 48/142 (33%), Gaps = 26/142 (18%)
Query: 340 TISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKT 399
T + LG + + HP E+ R+ A + E++RY+
Sbjct: 245 TTTVLLGNIVRTLDEHPAHWDAAAEDPGRI------------------PAIVEEVLRYRP 286
Query: 400 LVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLK 459
P + T+ G + ++ + + D D DP+ F P R S G
Sbjct: 287 PFPQ-MQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSR--KSGGA-- 341
Query: 460 KKDRTLPFGFGKRLCPGETFAR 481
L FG G C G AR
Sbjct: 342 ---AQLSFGHGVHFCLGAPLAR 360
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin
aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes
teichomyceticus} PDB: 3o1a_A*
Length = 384
Score = 43.0 bits (102), Expect = 2e-04
Identities = 25/142 (17%), Positives = 48/142 (33%), Gaps = 32/142 (22%)
Query: 340 TISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYKT 399
++ QL + HP+ ++ + + EL ++ E++R+ +
Sbjct: 230 QMAAQLAVAVLLLVTHPD-------QMALLREKPEL-----------IDSATEEVLRHAS 271
Query: 400 LVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQLK 459
+V P A D G + G ++ S+ + P + F R + +
Sbjct: 272 IVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNRAP-----GDRFDITR--EKATHMA 324
Query: 460 KKDRTLPFGFGKRLCPGETFAR 481
FG G C G AR
Sbjct: 325 -------FGHGIHHCIGAPLAR 339
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM;
1.60A {Mycobacterium tuberculosis}
Length = 398
Score = 42.2 bits (100), Expect = 3e-04
Identities = 31/144 (21%), Positives = 52/144 (36%), Gaps = 32/144 (22%)
Query: 338 SNTISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRY 397
+T+SG G L + + + D + + + I E++R+
Sbjct: 236 RHTLSG--GTEQ--LLRNRD-------QWDLL-----------QRDPSLLPGAIEEMLRW 273
Query: 398 KTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQ 457
V ++ T D F G + G M+ + D ++ +PE F +R + N
Sbjct: 274 TAPVK-NMCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQR--NPNSH 330
Query: 458 LKKKDRTLPFGFGKRLCPGETFAR 481
L FGFG C G AR
Sbjct: 331 LA-------FGFGTHFCLGNQLAR 347
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans}
Length = 450
Score = 41.6 bits (98), Expect = 4e-04
Identities = 30/144 (20%), Positives = 48/144 (33%), Gaps = 32/144 (22%)
Query: 338 SNTISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRY 397
S + +G L P+ RV +A+ + + E +R+
Sbjct: 295 SASSAG--AALA--LARDPD-------LFARV-----------KADRNLLPGIVEEAIRW 332
Query: 398 KTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQ 457
T V A D G + G ++ + ++DP + +P F P R +N
Sbjct: 333 TTPVQ-HFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTR--PANRH 389
Query: 458 LKKKDRTLPFGFGKRLCPGETFAR 481
L FG G C G AR
Sbjct: 390 LA-------FGAGSHQCLGLHLAR 406
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; HET: HEM; 1.50A {Sulfolobus
solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A*
1io9_A* 1io8_A*
Length = 368
Score = 39.5 bits (93), Expect = 0.002
Identities = 29/143 (20%), Positives = 43/143 (30%), Gaps = 34/143 (23%)
Query: 339 NTISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYK 398
N IS + R+ + I E +RY
Sbjct: 216 NLISN--SVID---FTRFN-------LWQRIREENLYLKA------------IEEALRYS 251
Query: 399 TLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQL 458
V K E +E+G + + + D +++ D E F P+R + N
Sbjct: 252 PPVM-RTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDR--NPNPH- 307
Query: 459 KKKDRTLPFGFGKRLCPGETFAR 481
L FG G LC G AR
Sbjct: 308 ------LSFGSGIHLCLGAPLAR 324
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron,
metal-binding, monooxygenase, oxidoreductase; HET: HEM;
1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Length = 367
Score = 39.5 bits (93), Expect = 0.002
Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 10/93 (10%)
Query: 389 ATIREIMRYKTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRP 448
+ E +R+ V E +++G ++ + + D +++ DP++F P
Sbjct: 242 KAVEEALRFSPPVM-RTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIP 300
Query: 449 ERFLDSNGQLKKKDRTLPFGFGKRLCPGETFAR 481
+R N L FG G LC G AR
Sbjct: 301 DR--TPNPHLS-------FGSGIHLCLGAPLAR 324
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase,
oxidoreductase; HET: HEM; 2.00A {Sphingopyxis
macrogoltabida}
Length = 426
Score = 38.8 bits (91), Expect = 0.003
Identities = 32/146 (21%), Positives = 55/146 (37%), Gaps = 37/146 (25%)
Query: 339 NTISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRYK 398
N+++G G L +P+ + ++ +A E + EI+R++
Sbjct: 272 NSMTG--GVLA--LHKNPD-------QFAKL-----------KANPALVETMVPEIIRWQ 309
Query: 399 TLVPLSVPHK---ATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSN 455
T + H A D+ G + KG +V Y + D ++ PE F +R
Sbjct: 310 T----PLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDR----- 360
Query: 456 GQLKKKDRTLPFGFGKRLCPGETFAR 481
+ + L FGFG C G A
Sbjct: 361 ---PRPRQHLSFGFGIHRCVGNRLAE 383
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding,
oxidoreductase, omega-hydroxylation, iron, heme, fatty
acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium
tuberculosis} PDB: 2wm4_A*
Length = 435
Score = 38.1 bits (89), Expect = 0.005
Identities = 26/121 (21%), Positives = 42/121 (34%), Gaps = 24/121 (19%)
Query: 338 SNTISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRY 397
N I+ G L +PE + DR S+ L A + EI+R+
Sbjct: 280 RNAITH--GVLA--LSRYPE-------QRDRW--WSDFDGLAPTA--------VEEIVRW 318
Query: 398 KTLVPLSVPHKATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDSNGQ 457
+ V + + T+D G + G + + D + DP F R + N
Sbjct: 319 ASPV-VYMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLAR--NPNPH 375
Query: 458 L 458
L
Sbjct: 376 L 376
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A
{Pseudomonas SP} SCOP: a.104.1.1
Length = 428
Score = 36.9 bits (86), Expect = 0.015
Identities = 25/147 (17%), Positives = 52/147 (35%), Gaps = 38/147 (25%)
Query: 338 SNTISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRY 397
S++ G + +PE +L +++ + E +R+
Sbjct: 273 SSSSGG--AIIG--LSRNPE-------QLALA-----------KSDPALIPRLVDEAVRW 310
Query: 398 KTLVPLSVPHK---ATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDS 454
V A D G ++++G ++ S + D +++ +P+ F R
Sbjct: 311 TA----PVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITR--FP 364
Query: 455 NGQLKKKDRTLPFGFGKRLCPGETFAR 481
N L FG+G +C G+ A+
Sbjct: 365 NRHLG-------FGWGAHMCLGQHLAK 384
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron,
metal-binding, oxidoreductase; HET: HEM; 1.35A
{Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A*
3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Length = 433
Score = 33.8 bits (78), Expect = 0.12
Identities = 24/124 (19%), Positives = 42/124 (33%), Gaps = 33/124 (26%)
Query: 338 SNTISGQLGFLWQQFLLHPEVQTKIQEELDRVVGRSELPNLNHRAELHYTEATIREIMRY 397
N+I+ G + F HP+ + + + E EI+R+
Sbjct: 274 RNSITQ--GMMA--FAEHPD-------QWELY-----------KKVR--PETAADEIVRW 309
Query: 398 KTLVPLSVPHK---ATEDANFMGYHVEKGTIMVPSLYCLHNDPDIWGDPENFRPERFLDS 454
T V A D G ++KG +V + D +++ DP F R +
Sbjct: 310 AT----PVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILR--NP 363
Query: 455 NGQL 458
N +
Sbjct: 364 NPHV 367
>1j7n_A Lethal factor precursor; anthrax, lethal toxin, zinc
metalloprotease, mapkk, MEK; 2.30A {Bacillus anthracis}
SCOP: d.92.1.14 d.92.1.14 d.166.1.1 PDB: 1jky_A 1pwp_A*
1pwq_A* 1pwv_A 1zxv_A* 1pwu_A* 1pww_A 3kwv_C
Length = 776
Score = 31.9 bits (71), Expect = 0.53
Identities = 14/88 (15%), Positives = 24/88 (27%), Gaps = 4/88 (4%)
Query: 227 KDITRLNDNLANYAKFYTEPLAGTLTFVPFAKYLPPFFGYMKDITRLNDNLANYAKNSIR 286
++ + + A +Y EP + Y P F YM NL+ R
Sbjct: 208 QNSNEVQEVFAKAFAYYIEPQHRDV----LQLYAPEAFNYMDKFNEQEINLSLEELKDQR 263
Query: 287 KKMDSFNEDTINSAVDAYIKMMKEAQAD 314
+ I + + E
Sbjct: 264 MLSRYEKWEKIKQHYQHWSDSLSEEGRG 291
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 29.9 bits (66), Expect = 0.95
Identities = 5/30 (16%), Positives = 15/30 (50%), Gaps = 10/30 (33%)
Query: 282 KNSIRKKMDS----FNEDT-----INSAVD 302
K ++ KK+ + + +D+ I + ++
Sbjct: 19 KQAL-KKLQASLKLYADDSAPALAIKATME 47
>3lml_A LIN1278 protein; structural genomics, PSI-2, protein structure
initiative, northeast structural genomics consortium,
NESG, LKR115; 3.30A {Listeria innocua}
Length = 460
Score = 30.5 bits (68), Expect = 1.3
Identities = 20/92 (21%), Positives = 34/92 (36%), Gaps = 15/92 (16%)
Query: 268 KDITRL----NDNLANYAKNSIRKKMDSFNEDTINSAVDAYIKMMKEAQ-----ADG--- 315
+D+ L + + + KN I + +D N DT + +DA + +G
Sbjct: 333 QDLNSLTTFSKEKSSKFRKNKISRILDGINNDTRRNILDAIKERKDANTDIPADENGVQF 392
Query: 316 ---DRETYFTEEQLKLVIQDFTFPASNTISGQ 344
+ Y E Q I +F A T+S
Sbjct: 393 ILSMQTAYLNELQDSGAITNFDSTADITVSLN 424
>3hxl_A Uncharacterized protein DSY3957; alpha-beta three-domained
protein., structural genomics, PSI protein structure
initiative; 1.90A {Desulfitobacterium hafniense}
Length = 446
Score = 28.9 bits (64), Expect = 4.8
Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 9/84 (10%)
Query: 268 KDITRL----NDNLANYAKNSIRKKMDSFNEDTINSAVDAYIKMMKEAQAD-----GDRE 318
+DI L D +AKN + + +D N D + YI + +
Sbjct: 325 QDINTLTSFTADKGKQFAKNRVIRVLDGINNDFVRIFSKFYIGKVSNNADGRNLLKSECI 384
Query: 319 TYFTEEQLKLVIQDFTFPASNTIS 342
Y Q I++F T+
Sbjct: 385 NYMNTLQDIDAIKNFDGQTDLTVQ 408
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide
compelx, VHS domain, DXXLL sorting signal, signaling
protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB:
1jpl_A 1lf8_A*
Length = 171
Score = 27.2 bits (60), Expect = 8.5
Identities = 18/104 (17%), Positives = 27/104 (25%), Gaps = 23/104 (22%)
Query: 269 DITRLNDNLANYAKNSIRKKMDSFNEDTINSAVDAYIKMMKEAQAD-----GDRETYFTE 323
D A + K+ S E A+ MK G F
Sbjct: 39 DQINKELEGPQIAVRLLAHKIQSPQEWEALQALTVLEACMKNCGRRFHNEVGKFR--FLN 96
Query: 324 EQLKLVIQDFTFPASNTISGQLGFLWQQFLLHPEVQTKIQEELD 367
E +K+V + +V+TK+ E L
Sbjct: 97 ELIKVVSPKYLGDRV----------------SEKVKTKVIELLY 124
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.140 0.432
Gapped
Lambda K H
0.267 0.0762 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 8,268,868
Number of extensions: 511305
Number of successful extensions: 1611
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1446
Number of HSP's successfully gapped: 122
Length of query: 516
Length of database: 6,701,793
Length adjustment: 98
Effective length of query: 418
Effective length of database: 3,965,535
Effective search space: 1657593630
Effective search space used: 1657593630
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (26.4 bits)