BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15771
(265 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0MQG6|NDUS3_PONPY NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial OS=Pongo pygmaeus GN=NDUFS3 PE=2 SV=1
Length = 263
Score = 328 bits (842), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 161/246 (65%), Positives = 193/246 (78%), Gaps = 6/246 (2%)
Query: 3 RNALRCSVALRGALMSMPSKHMRLMTTAATTANTTEARPTIRKPIDEVARSHLVDFGKYC 62
R L S RGA PS + + + A+T RPT+R P ++VA L FG+Y
Sbjct: 11 RGLLGASALTRGA--GRPSVLLLPVRRESAGADT---RPTVR-PRNDVAHQQLSAFGEYV 64
Query: 63 AEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGMDVPSRPNR 122
AEILPKY+++VQ++ +ELE+ I P+GV+PVL FL+DH AQF +LVD+ +DVP+R NR
Sbjct: 65 AEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNR 124
Query: 123 FEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVYFSNHPDLR 182
FEI+YNLLSLR+NSRIRVKTYTDELTP++SA VFKAANWYEREIWDMFGV+F+NHPDLR
Sbjct: 125 FEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGVFFANHPDLR 184
Query: 183 RILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLETPWEQFPNF 242
RILTDYGFEGHPFRKDFPLSGYVE+RYDDE KRVV EP+ELAQEFRKF L +PWE FP +
Sbjct: 185 RILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFPVY 244
Query: 243 RNTPGS 248
R P S
Sbjct: 245 RQPPES 250
>sp|Q0MQG7|NDUS3_GORGO NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial OS=Gorilla gorilla gorilla GN=NDUFS3 PE=2
SV=1
Length = 263
Score = 328 bits (842), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 161/246 (65%), Positives = 193/246 (78%), Gaps = 6/246 (2%)
Query: 3 RNALRCSVALRGALMSMPSKHMRLMTTAATTANTTEARPTIRKPIDEVARSHLVDFGKYC 62
R L S RGA PS + + + A+T RPT+R P ++VA L FG+Y
Sbjct: 11 RGLLGASALTRGA--GRPSVLLLPVRRESAGADT---RPTVR-PRNDVAHKQLSAFGEYV 64
Query: 63 AEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGMDVPSRPNR 122
AEILPKY+++VQ++ +ELE+ I P+GV+PVL FL+DH AQF +LVD+ +DVP+R NR
Sbjct: 65 AEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNR 124
Query: 123 FEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVYFSNHPDLR 182
FEI+YNLLSLR+NSRIRVKTYTDELTP++SA VFKAANWYEREIWDMFGV+F+NHPDLR
Sbjct: 125 FEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGVFFANHPDLR 184
Query: 183 RILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLETPWEQFPNF 242
RILTDYGFEGHPFRKDFPLSGYVE+RYDDE KRVV EP+ELAQEFRKF L +PWE FP +
Sbjct: 185 RILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFPVY 244
Query: 243 RNTPGS 248
R P S
Sbjct: 245 RQPPES 250
>sp|O75489|NDUS3_HUMAN NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial OS=Homo sapiens GN=NDUFS3 PE=1 SV=1
Length = 264
Score = 327 bits (838), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 160/246 (65%), Positives = 192/246 (78%), Gaps = 6/246 (2%)
Query: 3 RNALRCSVALRGALMSMPSKHMRLMTTAATTANTTEARPTIRKPIDEVARSHLVDFGKYC 62
R L S RG PS + + + A+T RPT+R P ++VA L FG+Y
Sbjct: 12 RGILGASALTRGT--GRPSVLLLPVRRESAGADT---RPTVR-PRNDVAHKQLSAFGEYV 65
Query: 63 AEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGMDVPSRPNR 122
AEILPKY+++VQ++ +ELE+ I P+GV+PVL FL+DH AQF +LVD+ +DVP+R NR
Sbjct: 66 AEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNR 125
Query: 123 FEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVYFSNHPDLR 182
FEI+YNLLSLR+NSRIRVKTYTDELTP++SA VFKAANWYEREIWDMFGV+F+NHPDLR
Sbjct: 126 FEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGVFFANHPDLR 185
Query: 183 RILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLETPWEQFPNF 242
RILTDYGFEGHPFRKDFPLSGYVE+RYDDE KRVV EP+ELAQEFRKF L +PWE FP +
Sbjct: 186 RILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFPVY 245
Query: 243 RNTPGS 248
R P S
Sbjct: 246 RQPPES 251
>sp|Q0MQG8|NDUS3_PANTR NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial OS=Pan troglodytes GN=NDUFS3 PE=2 SV=1
Length = 264
Score = 327 bits (837), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 160/246 (65%), Positives = 192/246 (78%), Gaps = 6/246 (2%)
Query: 3 RNALRCSVALRGALMSMPSKHMRLMTTAATTANTTEARPTIRKPIDEVARSHLVDFGKYC 62
R L S RG PS + + + A+T RPT+R P ++VA L FG+Y
Sbjct: 12 RGILGASALTRGT--GRPSVLLLPVRRESAGADT---RPTVR-PRNDVAHKQLSAFGEYV 65
Query: 63 AEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGMDVPSRPNR 122
AEILPKY+++VQ++ +ELE+ I P+GV+PVL FL+DH AQF +LVD+ +DVP+R NR
Sbjct: 66 AEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNR 125
Query: 123 FEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVYFSNHPDLR 182
FEI+YNLLSLR+NSRIRVKTYTDELTP++SA VFKAANWYEREIWDMFGV+F+NHPDLR
Sbjct: 126 FEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGVFFANHPDLR 185
Query: 183 RILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLETPWEQFPNF 242
RILTDYGFEGHPFRKDFPLSGYVE+RYDDE KRVV EP+ELAQEFRKF L +PWE FP +
Sbjct: 186 RILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFPVY 245
Query: 243 RNTPGS 248
R P S
Sbjct: 246 RQPPES 251
>sp|P23709|NDUS3_BOVIN NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial OS=Bos taurus GN=NDUFS3 PE=1 SV=1
Length = 266
Score = 325 bits (832), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 156/248 (62%), Positives = 197/248 (79%), Gaps = 10/248 (4%)
Query: 1 MLRNALRCSVALRGALMSMPSKHMRLMTTAATTANTTEARPTIRKPIDEVARSHLVDFGK 60
++ +A VA R +++ +P +R ++AA T RPT+R P ++VA L FG+
Sbjct: 16 LVGSAAPARVAGRPSVLLLP---VRRESSAADT------RPTVR-PRNDVAHKQLSAFGE 65
Query: 61 YCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGMDVPSRP 120
Y AEILPKY+++VQ++ +ELE+ I P+GV+PVL FL+DH AQF +L D+ +D+P+R
Sbjct: 66 YVAEILPKYVQQVQVSCFNELEICIHPDGVIPVLTFLRDHSNAQFKSLADLTAVDIPTRQ 125
Query: 121 NRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVYFSNHPD 180
NRFEI+YNLLSLR+NSRIRVKTYTDELTP++S+ V+KAANWYEREIWDMFGV+F+NHPD
Sbjct: 126 NRFEIVYNLLSLRFNSRIRVKTYTDELTPIESSVPVYKAANWYEREIWDMFGVFFANHPD 185
Query: 181 LRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLETPWEQFP 240
LRRILTDYGFEGHPFRKDFPLSGYVE+RYDDE KRVV EP+ELAQEFRKF L +PWE FP
Sbjct: 186 LRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFP 245
Query: 241 NFRNTPGS 248
+R P S
Sbjct: 246 AYRQPPES 253
>sp|Q9DCT2|NDUS3_MOUSE NADH dehydrogenase [ubiquinone] iron-sulfur protein 3,
mitochondrial OS=Mus musculus GN=Ndufs3 PE=1 SV=2
Length = 263
Score = 315 bits (806), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 154/247 (62%), Positives = 186/247 (75%), Gaps = 8/247 (3%)
Query: 3 RNALRCSVALRGALM-SMPSKHMRLMTTAATTANTTEARPTIRKPIDEVARSHLVDFGKY 61
R L + RGA S+ +H+R + AA + RPT+R P +V L FG+Y
Sbjct: 11 RGLLGAASVGRGAGRPSVLWQHVRRESAAA------DKRPTVR-PRSDVTHKQLSAFGEY 63
Query: 62 CAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGMDVPSRPN 121
AEILPKY+++VQ++ DELE+ I P+GV+P L FL+DH AQF +L D+ +DVP+R N
Sbjct: 64 VAEILPKYVQQVQVSCLDELEICIHPDGVIPTLTFLRDHTNAQFKSLADLTAVDVPTRQN 123
Query: 122 RFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVYFSNHPDL 181
RFEI+YNLLSLR+NSRIRVKTY DELTP+DS V AANWYERE+WDMFGV+F NHPDL
Sbjct: 124 RFEIVYNLLSLRFNSRIRVKTYADELTPIDSIVSVHIAANWYEREVWDMFGVFFFNHPDL 183
Query: 182 RRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLETPWEQFPN 241
RRILTDYGFEGHPFRKDFPL+GYVE+RYDDE KRVV EP+ELAQEFRKF L +PWE FP
Sbjct: 184 RRILTDYGFEGHPFRKDFPLTGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFPA 243
Query: 242 FRNTPGS 248
+R P S
Sbjct: 244 YRQPPES 250
>sp|O21271|NDUS3_RECAM NADH-ubiquinone oxidoreductase subunit 9 OS=Reclinomonas americana
GN=NAD9 PE=3 SV=1
Length = 204
Score = 246 bits (629), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/184 (60%), Positives = 141/184 (76%), Gaps = 1/184 (0%)
Query: 55 LVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGM 114
L +FG ++ PKYI+K I S EL L + P ++ +++ LK+H QF +L D+ +
Sbjct: 10 LKEFGISLIKMFPKYIDKA-IYSKGELTLHVKPTNLIALMKILKNHTNCQFKSLSDLCAV 68
Query: 115 DVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVY 174
D P + RFEI+YNLLS+RYNSRIRVKT+ DELTP+ S +F+AA W+ERE+WD+FGVY
Sbjct: 69 DFPEKKERFEIVYNLLSVRYNSRIRVKTFVDELTPVPSVTCLFQAAGWFEREVWDLFGVY 128
Query: 175 FSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLET 234
F+NHPDLRRILTDYGFEGHP RKDFPL+GYVEVRYDDE+KRVV E LE+ QEFR F +
Sbjct: 129 FTNHPDLRRILTDYGFEGHPMRKDFPLTGYVEVRYDDEQKRVVTESLEMTQEFRSFNFTS 188
Query: 235 PWEQ 238
PWEQ
Sbjct: 189 PWEQ 192
>sp|P23710|NDUS3_NEUCR NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo-31 PE=2 SV=2
Length = 283
Score = 233 bits (594), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/277 (45%), Positives = 171/277 (61%), Gaps = 21/277 (7%)
Query: 9 SVALRGALMSM-PSKHMR-LMTTAATTANTTEA---RPTIRKPIDEVARSHLVD------ 57
S AL AL S PS +R L TT+ N E R R+P+ + +V+
Sbjct: 8 SRALASALRSAKPSPAIRCLATTSRNLINMPEGPNPRQFPREPLPGALNAAVVNPADKYQ 67
Query: 58 --------FGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLV 109
+G + LPKYI++ + DEL + I P GV+PV FLK + A++ +
Sbjct: 68 SKADNLHKYGSWLMGCLPKYIQQFSVWK-DELTIYISPAGVIPVFSFLKYNTAAEYTQVS 126
Query: 110 DIAGMDVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWD 169
DI +D P++ RFE++YNLLS+R+NSRIRVKTY DE++P+ S ++ ANWYERE++D
Sbjct: 127 DITAVDFPTKDQRFEVVYNLLSVRHNSRIRVKTYADEVSPVPSITPLYDGANWYEREVYD 186
Query: 170 MFGVYFSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRK 229
+FGV+F+ HPDLRRI+TDYGF+GHP RKDFP++GY E+RYD+EKKR+V EPLE+ Q FR
Sbjct: 187 LFGVFFTGHPDLRRIMTDYGFDGHPLRKDFPMTGYTEIRYDEEKKRIVTEPLEMTQAFRN 246
Query: 230 FQ-LETPWEQFPNFRNTPGSSGSEEIPLDEKKEEEKK 265
F+ + WEQ + S P E K EEKK
Sbjct: 247 FEGGSSAWEQVGAGIDRKPESFKLPTPKPETKPEEKK 283
>sp|P34944|NDUS3_MARPO NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Marchantia
polymorpha GN=NAD9 PE=3 SV=2
Length = 195
Score = 232 bits (591), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 111/181 (61%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
Query: 58 FGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGMDVP 117
F K LPK+I K Q TS E L P + +L FLK H +F L+DI G+D P
Sbjct: 6 FFKSLIATLPKWIHKCQ-TSKHENILYTNPNSLFQLLYFLKYHTNTRFKVLIDICGVDYP 64
Query: 118 SRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVYFSN 177
SR RFE++YNLLS+ YN+RIR+ T DE+TP+ S +F +A W+ERE WDMFGVYFSN
Sbjct: 65 SRKRRFEVVYNLLSIDYNTRIRILTSVDEITPICSVVSIFPSAGWWERETWDMFGVYFSN 124
Query: 178 HPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLETPWE 237
HPDLRRILTDYGFEGHP RKDFPLSGYVEVRYDD +KRVV EP+E+ QEFR F +PWE
Sbjct: 125 HPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDSEKRVVSEPIEMTQEFRYFDFASPWE 184
Query: 238 Q 238
Q
Sbjct: 185 Q 185
>sp|Q00673|NDUS3_CANMA Probable NADH-ubiquinone oxidoreductase 30.4 kDa subunit,
mitochondrial OS=Candida maltosa GN=ALI1 PE=3 SV=1
Length = 276
Score = 230 bits (586), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 110/212 (51%), Positives = 144/212 (67%), Gaps = 2/212 (0%)
Query: 55 LVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGM 114
L FG Y LPKYI++ + DEL + + P + PV+ +LK+H + QF ++DI
Sbjct: 66 LHKFGTYIMSCLPKYIQQFSVWK-DELTIYVAPSAIRPVMSYLKNHTSCQFKAVMDITAA 124
Query: 115 DVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVY 174
D PSR NRF+++YNLLS R+NSRIRVKTY +E +P+ S +F ANWYERE +D+FGV+
Sbjct: 125 DYPSRTNRFDVVYNLLSDRHNSRIRVKTYANETSPVPSVTPLFNGANWYERETYDLFGVF 184
Query: 175 FSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQL-E 233
F HPDLRRI+TDYGFEGHP RKDFP +GY EVRYD+EKKRV+ EPLEL Q +R F +
Sbjct: 185 FVGHPDLRRIMTDYGFEGHPLRKDFPTTGYTEVRYDEEKKRVIYEPLELTQAWRNFTVGS 244
Query: 234 TPWEQFPNFRNTPGSSGSEEIPLDEKKEEEKK 265
+ WE ++ S P E ++EEKK
Sbjct: 245 SVWEPVGEGKDFTPESFKLPTPQPEPEQEEKK 276
>sp|Q37622|NDUS3_PROWI NADH-ubiquinone oxidoreductase subunit 9 OS=Prototheca wickerhamii
GN=NAD9 PE=3 SV=1
Length = 192
Score = 228 bits (580), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 102/182 (56%), Positives = 134/182 (73%), Gaps = 1/182 (0%)
Query: 57 DFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGMDV 116
+F K ++P++I+ ++ +E + PE + P L FL+DH + Q+ +DI D
Sbjct: 4 NFEKSILLMVPQWIQ-YHVSHRNETTFYVYPEYLKPFLYFLRDHMSTQYKVCIDITAADY 62
Query: 117 PSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVYFS 176
PSR +RFE +YNLLS+ YNSRIR+KT DE+T L+S V+ +A W+ERE+WDMFGV+F
Sbjct: 63 PSRASRFECVYNLLSVEYNSRIRIKTCVDEITTLESVTPVYSSAAWWEREVWDMFGVFFH 122
Query: 177 NHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLETPW 236
NHPDLRRILTDYGF+GHP RKDFPLSGYVEVRYDD +KRV +E +E +QEFR F E+PW
Sbjct: 123 NHPDLRRILTDYGFQGHPLRKDFPLSGYVEVRYDDSEKRVCIESVEYSQEFRYFDFESPW 182
Query: 237 EQ 238
EQ
Sbjct: 183 EQ 184
>sp|Q2W3I6|NUOC_MAGSA NADH-quinone oxidoreductase subunit C OS=Magnetospirillum
magneticum (strain AMB-1 / ATCC 700264) GN=nuoC PE=3
SV=1
Length = 199
Score = 222 bits (566), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 99/183 (54%), Positives = 131/183 (71%)
Query: 55 LVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGM 114
L D G+Y A+ LP+ + ++ EL L + +V V+ +LKD F LVD+ G+
Sbjct: 5 LKDLGEYIAQALPQDVLGTEVNRCGELSLTVKAASIVKVMTYLKDDAGCLFKQLVDVCGV 64
Query: 115 DVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVY 174
D P R RF+++Y+LLS+++N R+RVK TDE T + S VF +A W+ERE+WDM+GV
Sbjct: 65 DWPGREQRFDVVYHLLSMKHNQRVRVKVATDEETAVPSVTGVFSSAGWFEREVWDMYGVL 124
Query: 175 FSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLET 234
FS+HPDLRRILTDYGFEGHP RKDFPL+GYVE+RYDDE KRVV EP++L Q+FR F +
Sbjct: 125 FSDHPDLRRILTDYGFEGHPLRKDFPLTGYVEMRYDDETKRVVYEPVKLTQDFRSFDFLS 184
Query: 235 PWE 237
PWE
Sbjct: 185 PWE 187
>sp|Q35322|NDUS3_ORYSJ NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Oryza
sativa subsp. japonica GN=NAD9 PE=2 SV=2
Length = 190
Score = 215 bits (548), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 130/180 (72%), Gaps = 2/180 (1%)
Query: 60 KYCAEILPK-YIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGMDVPS 118
+Y EILPK ++ K++ + + + P+L FLK H + L+DI G+D PS
Sbjct: 8 QYSWEILPKKWVHKMKRSEHGN-RFYTNTDYLFPLLCFLKWHTYTRVQVLIDICGVDYPS 66
Query: 119 RPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVYFSNH 178
R RFE++YNLLS RYNSRIRV+T DE+T + S +F +A W+ERE+WDMFGV F NH
Sbjct: 67 RKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISSVVSLFPSAGWWEREVWDMFGVSFINH 126
Query: 179 PDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLETPWEQ 238
PDLRRILTDYGFEGHP RKDFPLSGYVEVRYDD +KRVV EP+E+ QEFR F +PWEQ
Sbjct: 127 PDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQ 186
>sp|Q33994|NDUS3_BETTR NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Beta
trigyna GN=NAD9 PE=2 SV=1
Length = 192
Score = 214 bits (546), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 105/181 (58%), Positives = 133/181 (73%), Gaps = 4/181 (2%)
Query: 60 KYCAEILPK-YIEKVQITS-GDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGMDVP 117
KY E LPK +++K++ + G+ + + + +L FLK H +F L+DI G+D P
Sbjct: 8 KYSWETLPKKWVKKIEKSEHGNRFD--TNTDYLFQLLCFLKLHTYTRFQVLIDICGVDYP 65
Query: 118 SRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVYFSN 177
SR RFE++YNLLS RYNSRIR++T DE+T + S +F +A W+ERE+WDMFGV F N
Sbjct: 66 SRKRRFEVVYNLLSTRYNSRIRLQTSADEVTRISSVVSLFPSAGWWEREVWDMFGVSFIN 125
Query: 178 HPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLETPWE 237
HPDLRRILTDYGFEGHP RKDFPLSGYVEVRYDD +KRVV EP+E+ QEFR F +PWE
Sbjct: 126 HPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWE 185
Query: 238 Q 238
Q
Sbjct: 186 Q 186
>sp|Q34011|NDUS3_PATWE NADH dehydrogenase [ubiquinone] iron-sulfur protein 3
OS=Patellifolia webbiana GN=NAD9 PE=2 SV=2
Length = 192
Score = 214 bits (545), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 105/181 (58%), Positives = 133/181 (73%), Gaps = 4/181 (2%)
Query: 60 KYCAEILPK-YIEKVQITS-GDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGMDVP 117
KY E LPK +++K++ + G+ + + + +L FLK H +F L+DI G+D P
Sbjct: 8 KYSWETLPKKWVKKIEKSEHGNRFD--TNTDYLFQLLCFLKLHTYTRFQVLIDICGVDYP 65
Query: 118 SRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVYFSN 177
SR RFE++YNLLS RYNSRIR++T DE+T + S +F +A W+ERE+WDMFGV F N
Sbjct: 66 SRKRRFEVVYNLLSTRYNSRIRLQTSADEVTRISSVVRLFPSAGWWEREVWDMFGVSFIN 125
Query: 178 HPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLETPWE 237
HPDLRRILTDYGFEGHP RKDFPLSGYVEVRYDD +KRVV EP+E+ QEFR F +PWE
Sbjct: 126 HPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWE 185
Query: 238 Q 238
Q
Sbjct: 186 Q 186
>sp|Q37787|NDUS3_BETVU NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Beta
vulgaris GN=NAD9 PE=2 SV=3
Length = 192
Score = 212 bits (539), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/181 (57%), Positives = 132/181 (72%), Gaps = 4/181 (2%)
Query: 60 KYCAEILPK-YIEKVQITS-GDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGMDVP 117
KY E LPK +++K++ + G+ + + + +L FLK H +F L+DI G+D P
Sbjct: 8 KYSWETLPKKWVKKIEKSEHGNRFD--TNTDYLFQLLCFLKLHTYTRFQVLIDICGVDYP 65
Query: 118 SRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVYFSN 177
SR RFE++YNLLS RYNSRIR++T DE+T + +F +A W+ERE+WDMFGV F N
Sbjct: 66 SRKRRFEVVYNLLSTRYNSRIRLQTCADEVTRISLVVSLFPSAGWWEREVWDMFGVSFIN 125
Query: 178 HPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLETPWE 237
HPDLRRILTDYGFEGHP RKDFPLSGYVEVRYDD +KRVV EP+E+ QEFR F +PWE
Sbjct: 126 HPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWE 185
Query: 238 Q 238
Q
Sbjct: 186 Q 186
>sp|Q11JK4|NUOC_MESSB NADH-quinone oxidoreductase subunit C OS=Mesorhizobium sp. (strain
BNC1) GN=nuoC PE=3 SV=1
Length = 200
Score = 212 bits (539), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 105/183 (57%), Positives = 128/183 (69%), Gaps = 1/183 (0%)
Query: 55 LVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGM 114
L D Y E L ++ + + DEL + + P +V VL FLK QF VDI+G+
Sbjct: 5 LRDLAGYIKEKLDGRVQD-WMVAYDELTIFVEPGDIVDVLTFLKSDVQCQFFAFVDISGV 63
Query: 115 DVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVY 174
D P+R RFE++Y+LLS R N RIRVK TDE TP+ S EVF AANWYEREI+D++GV
Sbjct: 64 DYPARERRFEVVYHLLSPRQNQRIRVKVSTDEETPIPSVIEVFPAANWYEREIYDLYGVL 123
Query: 175 FSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLET 234
F+ HPDLRRILTDYGFEGHP RKDFPL+G+VEV YDDE KRVV +P+ L QEFR F +
Sbjct: 124 FTEHPDLRRILTDYGFEGHPLRKDFPLTGFVEVHYDDEAKRVVYQPVNLRQEFRNFDFLS 183
Query: 235 PWE 237
PWE
Sbjct: 184 PWE 186
>sp|B3PVZ9|NUOC1_RHIE6 NADH-quinone oxidoreductase subunit C 1 OS=Rhizobium etli (strain
CIAT 652) GN=nuoC1 PE=3 SV=1
Length = 200
Score = 211 bits (538), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/183 (55%), Positives = 125/183 (68%), Gaps = 1/183 (0%)
Query: 55 LVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGM 114
L + Y E I Q+ G EL L E ++P+L FL+D FVNL+DI G+
Sbjct: 5 LTELASYLGEARGNLIAASQLKYG-ELTLTATGENLIPLLTFLRDDAKCGFVNLIDICGV 63
Query: 115 DVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVY 174
D P R RF+++Y+LLS + N RIRVK TDE TP+ SA ++ A+W+ERE WDM+GV
Sbjct: 64 DWPQRELRFDVVYHLLSPKKNLRIRVKVATDEDTPVPSACGLYPGADWFERETWDMYGVL 123
Query: 175 FSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLET 234
F+ HPDLRRILTDYGFEGHP RKDFP +G+VEVRYDD KRVV EP+EL QEFR F +
Sbjct: 124 FTGHPDLRRILTDYGFEGHPLRKDFPTTGFVEVRYDDAAKRVVYEPVELKQEFRNFDFMS 183
Query: 235 PWE 237
PWE
Sbjct: 184 PWE 186
>sp|Q95748|NDUS3_ARATH NADH dehydrogenase [ubiquinone] iron-sulfur protein 3
OS=Arabidopsis thaliana GN=NAD9 PE=1 SV=2
Length = 190
Score = 211 bits (537), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 104/181 (57%), Positives = 132/181 (72%), Gaps = 4/181 (2%)
Query: 60 KYCAEILPK-YIEKVQITS-GDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGMDVP 117
KY E LPK +++K++ + G+ + + + +L FLK H + L+DI G+D P
Sbjct: 8 KYSWETLPKKWVKKMERSEHGNRFD--TNTDYLFQLLCFLKLHTYTRVQVLIDICGVDYP 65
Query: 118 SRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVYFSN 177
SR RFE++YNLLS RYNSRIRV+T DE+T + S +F +A W+ERE+WDMFGV F N
Sbjct: 66 SRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISSVVSLFPSAGWWEREVWDMFGVSFIN 125
Query: 178 HPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLETPWE 237
HPDLRRILTDYGFEGHP RKDFPLSGYV+VRYDD +KRVV EP+E+ QEFR F +PWE
Sbjct: 126 HPDLRRILTDYGFEGHPLRKDFPLSGYVQVRYDDPEKRVVSEPIEMTQEFRYFDFASPWE 185
Query: 238 Q 238
Q
Sbjct: 186 Q 186
>sp|P80261|NDUS3_SOLTU NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Solanum
tuberosum GN=NAD9 PE=1 SV=3
Length = 190
Score = 211 bits (537), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 103/181 (56%), Positives = 133/181 (73%), Gaps = 4/181 (2%)
Query: 60 KYCAEILPK-YIEKVQITS-GDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGMDVP 117
KY E LPK +++K++ + G+ + + + +L F+K H + L+DI G+D P
Sbjct: 8 KYSWETLPKKWVKKMERSEHGNRFD--TNTDYLFQLLCFMKLHTYTRVQVLIDICGVDYP 65
Query: 118 SRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVYFSN 177
SR RFE++YNLLS+RYNSRIRV+T DE+T + S +F +A W+ERE+WDMFGV+ N
Sbjct: 66 SRKQRFEVVYNLLSIRYNSRIRVQTSADEVTRISSVVSLFPSAGWWEREVWDMFGVFSIN 125
Query: 178 HPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLETPWE 237
HPDLRRILTDYGFEGHP RKDFPLSGYVEVRYDD +KRVV EP+E+ QEFR F +PWE
Sbjct: 126 HPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWE 185
Query: 238 Q 238
Q
Sbjct: 186 Q 186
>sp|Q2RU38|NUOC_RHORT NADH-quinone oxidoreductase subunit C OS=Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255) GN=nuoC PE=3 SV=1
Length = 213
Score = 210 bits (534), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 129/183 (70%), Gaps = 1/183 (0%)
Query: 55 LVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGM 114
L + G LP + +V++ + DEL+++ + VL FL+D +F LVDIAG+
Sbjct: 12 LKELGARIEAALPTDVVRVEM-AKDELQVIAQRPSIAKVLTFLRDDSACRFSQLVDIAGV 70
Query: 115 DVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVY 174
D PSR RFE++YN+LS+ +N RIRVK E TP+ S VF +ANW+ERE WDM+G++
Sbjct: 71 DYPSREERFEVVYNMLSMHHNQRIRVKISASEDTPVPSVTRVFSSANWFEREAWDMYGIF 130
Query: 175 FSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLET 234
FS HPDLRR+L+DYGFEGH RKDFPL+GY EVRYD+E KRVV EP+ L+Q+FR F +
Sbjct: 131 FSEHPDLRRLLSDYGFEGHAQRKDFPLTGYKEVRYDEELKRVVYEPVRLSQDFRTFDFLS 190
Query: 235 PWE 237
PWE
Sbjct: 191 PWE 193
>sp|Q1MIL3|NUOC_RHIL3 NADH-quinone oxidoreductase subunit C OS=Rhizobium leguminosarum
bv. viciae (strain 3841) GN=nuoC PE=3 SV=1
Length = 200
Score = 210 bits (534), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/183 (55%), Positives = 124/183 (67%), Gaps = 1/183 (0%)
Query: 55 LVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGM 114
L + Y E I Q+ G EL L E +V +L FL+D FVNL+DI G+
Sbjct: 5 LTELASYLGEARGNLIAASQMKYG-ELTLTTTGENLVALLTFLRDDAKCGFVNLIDICGV 63
Query: 115 DVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVY 174
D P R RF+++Y+LLS + N RIRVK TDE TP+ SA V+ A+W+ERE WDM+GV
Sbjct: 64 DWPQRELRFDVVYHLLSPKKNLRIRVKVATDEDTPVPSACPVYPGADWFERETWDMYGVL 123
Query: 175 FSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLET 234
F+ HPDLRRILTDYGFEGHP RKDFP +G+VEVRYDD KRVV EP+EL QEFR F +
Sbjct: 124 FTGHPDLRRILTDYGFEGHPLRKDFPTTGFVEVRYDDAAKRVVYEPVELKQEFRNFDFMS 183
Query: 235 PWE 237
PWE
Sbjct: 184 PWE 186
>sp|Q2K9T3|NUOC_RHIEC NADH-quinone oxidoreductase subunit C OS=Rhizobium etli (strain CFN
42 / ATCC 51251) GN=nuoC PE=3 SV=1
Length = 200
Score = 209 bits (532), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/183 (54%), Positives = 124/183 (67%), Gaps = 1/183 (0%)
Query: 55 LVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGM 114
L + Y E I Q+ G EL L E ++ +L FL+D FVN++DI G+
Sbjct: 5 LTELASYLGEARGNLIAASQLKYG-ELTLTATGENLIALLTFLRDDAKCGFVNMIDICGV 63
Query: 115 DVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVY 174
D P R RF+++Y+LLS + N RIRVK TDE TP+ SA V+ A+W+ERE WDM+GV
Sbjct: 64 DWPQRELRFDVVYHLLSPKKNLRIRVKVATDEDTPVPSACAVYPGADWFERETWDMYGVL 123
Query: 175 FSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLET 234
F+ HPDLRRILTDYGFEGHP RKDFP +G+VEVRYDD KRVV EP+EL QEFR F +
Sbjct: 124 FTGHPDLRRILTDYGFEGHPLRKDFPTTGFVEVRYDDAAKRVVYEPVELKQEFRNFDFMS 183
Query: 235 PWE 237
PWE
Sbjct: 184 PWE 186
>sp|B5ZYL4|NUOC_RHILW NADH-quinone oxidoreductase subunit C OS=Rhizobium leguminosarum
bv. trifolii (strain WSM2304) GN=nuoC PE=3 SV=1
Length = 200
Score = 209 bits (532), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/183 (55%), Positives = 123/183 (67%), Gaps = 1/183 (0%)
Query: 55 LVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGM 114
L + Y E I Q+ G EL L E ++ +L FL+D FVNL+DI G+
Sbjct: 5 LTELASYLGEARGNLIAASQMKYG-ELTLTTTGENLIALLTFLRDDAKCGFVNLIDICGV 63
Query: 115 DVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVY 174
D P R RF+++Y+LLS + N RIRVK TDE TP+ SA V A+W+ERE WDM+GV
Sbjct: 64 DWPQRELRFDVVYHLLSPKQNVRIRVKVATDEDTPVPSACAVHPGADWFERETWDMYGVL 123
Query: 175 FSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLET 234
F+ HPDLRRILTDYGFEGHP RKDFP +G+VEVRYDD KRVV EP+EL QEFR F +
Sbjct: 124 FTGHPDLRRILTDYGFEGHPLRKDFPTTGFVEVRYDDAAKRVVYEPVELKQEFRNFDFMS 183
Query: 235 PWE 237
PWE
Sbjct: 184 PWE 186
>sp|A6X1N2|NUOC_OCHA4 NADH-quinone oxidoreductase subunit C OS=Ochrobactrum anthropi
(strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=nuoC PE=3
SV=1
Length = 202
Score = 207 bits (526), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 102/183 (55%), Positives = 126/183 (68%), Gaps = 1/183 (0%)
Query: 55 LVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGM 114
L + Y E L IE+ ++ G EL L + ++ VL FL+D QFVNL DI+G+
Sbjct: 6 LGELSGYIKERLGDAIEEAKLAYG-ELTLSVPAASIISVLTFLRDDVQCQFVNLTDISGV 64
Query: 115 DVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVY 174
D P R RF+++Y L+S R N RIRVK DE T + SA VF A W+ERE +DM+GV
Sbjct: 65 DYPQRAKRFDVVYQLMSPRQNQRIRVKVQADEDTLVPSAVPVFVGAEWFERETYDMYGVL 124
Query: 175 FSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLET 234
FS HPDLRRILTDYGFEGHP RKDFPL+G+VEVRY+DE KRVV EP++L QEFR F +
Sbjct: 125 FSGHPDLRRILTDYGFEGHPLRKDFPLTGFVEVRYNDELKRVVYEPVQLRQEFRNFDFLS 184
Query: 235 PWE 237
PWE
Sbjct: 185 PWE 187
>sp|B0ULK6|NUOC_METS4 NADH-quinone oxidoreductase subunit C OS=Methylobacterium sp.
(strain 4-46) GN=nuoC PE=3 SV=1
Length = 215
Score = 206 bits (525), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 94/159 (59%), Positives = 120/159 (75%)
Query: 79 DELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGMDVPSRPNRFEIIYNLLSLRYNSRI 138
DEL L++ P +V VL L+D F + +DI G D P R RF+++Y+LLSLR+N RI
Sbjct: 43 DELTLVVEPSEIVRVLTHLRDDPACGFRSFIDICGADYPGREKRFDVVYHLLSLRHNRRI 102
Query: 139 RVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVYFSNHPDLRRILTDYGFEGHPFRKD 198
RVK TDE TP+ S VF AANWYERE +D++G+ FS HPDLRR+LTDYGFEGHP RKD
Sbjct: 103 RVKVQTDEATPVPSVITVFPAANWYERETYDLYGILFSGHPDLRRLLTDYGFEGHPLRKD 162
Query: 199 FPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLETPWE 237
FPL+G+VEVRYD ++ RVV EP++L+QEFR+F +PWE
Sbjct: 163 FPLTGFVEVRYDQDEGRVVYEPVKLSQEFRQFDFLSPWE 201
>sp|B1LUN5|NUOC_METRJ NADH-quinone oxidoreductase subunit C OS=Methylobacterium
radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831)
GN=nuoC PE=3 SV=1
Length = 215
Score = 206 bits (524), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 119/158 (75%)
Query: 80 ELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGMDVPSRPNRFEIIYNLLSLRYNSRIR 139
EL L++ +V L +L+D F N +DI G+D P R RF+++Y+LLSLR+N RIR
Sbjct: 44 ELTLVVQASDIVYALTYLRDDPACAFRNFIDICGVDYPQREKRFDVVYHLLSLRHNLRIR 103
Query: 140 VKTYTDELTPLDSANEVFKAANWYEREIWDMFGVYFSNHPDLRRILTDYGFEGHPFRKDF 199
+K TDE+TP+ S EVF AANWYERE +D++G+ FS HPDLRR+LTDYGFEGHP RKDF
Sbjct: 104 LKVQTDEVTPVPSVIEVFPAANWYERETYDLYGILFSGHPDLRRLLTDYGFEGHPLRKDF 163
Query: 200 PLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLETPWE 237
PL+G+VEVRYD ++ RVV EP++L QEFR F +PWE
Sbjct: 164 PLTGFVEVRYDQDQARVVYEPVQLTQEFRNFDFLSPWE 201
>sp|Q8G1B5|NUOC_BRUSU NADH-quinone oxidoreductase subunit C OS=Brucella suis biovar 1
(strain 1330) GN=nuoC PE=3 SV=1
Length = 202
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/188 (54%), Positives = 127/188 (67%), Gaps = 1/188 (0%)
Query: 50 VARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLV 109
++ L + Y E L IE+ + G EL L + ++ VL FL+D QFVNL
Sbjct: 1 MSEEALGELSGYIRERLGDAIEEANLAYG-ELTLCVPVASLIGVLTFLRDDVQCQFVNLT 59
Query: 110 DIAGMDVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWD 169
DI+G+D P R RF+++Y LLS R N RIRVK DE T + SA VF A WYERE +D
Sbjct: 60 DISGVDYPQREKRFDVVYQLLSPRQNQRIRVKVQADEDTLVPSAVPVFFGAEWYEREAYD 119
Query: 170 MFGVYFSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRK 229
M+G+ FS HPDLRRILTDYGFEGHP RKDFPL+G+VEVRY+DE KRVV EP++L QEFR
Sbjct: 120 MYGILFSGHPDLRRILTDYGFEGHPLRKDFPLTGFVEVRYNDELKRVVYEPVQLRQEFRN 179
Query: 230 FQLETPWE 237
F +PWE
Sbjct: 180 FDFLSPWE 187
>sp|B0CLD1|NUOC_BRUSI NADH-quinone oxidoreductase subunit C OS=Brucella suis (strain ATCC
23445 / NCTC 10510) GN=nuoC PE=3 SV=1
Length = 202
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/188 (54%), Positives = 127/188 (67%), Gaps = 1/188 (0%)
Query: 50 VARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLV 109
++ L + Y E L IE+ + G EL L + ++ VL FL+D QFVNL
Sbjct: 1 MSEEALGELSGYIRERLGDAIEEANLAYG-ELTLCVPVASLIGVLTFLRDDVQCQFVNLT 59
Query: 110 DIAGMDVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWD 169
DI+G+D P R RF+++Y LLS R N RIRVK DE T + SA VF A WYERE +D
Sbjct: 60 DISGVDYPQREKRFDVVYQLLSPRQNQRIRVKVQADEDTLVPSAVPVFFGAEWYEREAYD 119
Query: 170 MFGVYFSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRK 229
M+G+ FS HPDLRRILTDYGFEGHP RKDFPL+G+VEVRY+DE KRVV EP++L QEFR
Sbjct: 120 MYGILFSGHPDLRRILTDYGFEGHPLRKDFPLTGFVEVRYNDELKRVVYEPVQLRQEFRN 179
Query: 230 FQLETPWE 237
F +PWE
Sbjct: 180 FDFLSPWE 187
>sp|A5VPY5|NUOC_BRUO2 NADH-quinone oxidoreductase subunit C OS=Brucella ovis (strain ATCC
25840 / 63/290 / NCTC 10512) GN=nuoC PE=3 SV=1
Length = 202
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/188 (54%), Positives = 127/188 (67%), Gaps = 1/188 (0%)
Query: 50 VARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLV 109
++ L + Y E L IE+ + G EL L + ++ VL FL+D QFVNL
Sbjct: 1 MSEEALGELSGYIRERLGDAIEEANLAYG-ELTLCVPVASLIGVLTFLRDDVQCQFVNLT 59
Query: 110 DIAGMDVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWD 169
DI+G+D P R RF+++Y LLS R N RIRVK DE T + SA VF A WYERE +D
Sbjct: 60 DISGVDYPQREKRFDVVYQLLSPRQNQRIRVKVQADEDTLVPSAVPVFFGAEWYEREAYD 119
Query: 170 MFGVYFSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRK 229
M+G+ FS HPDLRRILTDYGFEGHP RKDFPL+G+VEVRY+DE KRVV EP++L QEFR
Sbjct: 120 MYGILFSGHPDLRRILTDYGFEGHPLRKDFPLTGFVEVRYNDELKRVVYEPVQLRQEFRN 179
Query: 230 FQLETPWE 237
F +PWE
Sbjct: 180 FDFLSPWE 187
>sp|Q8YGK2|NUOC_BRUME NADH-quinone oxidoreductase subunit C OS=Brucella melitensis
biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=nuoC
PE=3 SV=1
Length = 202
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/188 (54%), Positives = 127/188 (67%), Gaps = 1/188 (0%)
Query: 50 VARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLV 109
++ L + Y E L IE+ + G EL L + ++ VL FL+D QFVNL
Sbjct: 1 MSEEALGELSGYIRERLGDAIEEANLAYG-ELTLCVPVASLIGVLTFLRDDVQCQFVNLT 59
Query: 110 DIAGMDVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWD 169
DI+G+D P R RF+++Y LLS R N RIRVK DE T + SA VF A WYERE +D
Sbjct: 60 DISGVDYPQREKRFDVVYQLLSPRQNQRIRVKVQADEDTLVPSAVPVFFGAEWYEREAYD 119
Query: 170 MFGVYFSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRK 229
M+G+ FS HPDLRRILTDYGFEGHP RKDFPL+G+VEVRY+DE KRVV EP++L QEFR
Sbjct: 120 MYGILFSGHPDLRRILTDYGFEGHPLRKDFPLTGFVEVRYNDELKRVVYEPVQLRQEFRN 179
Query: 230 FQLETPWE 237
F +PWE
Sbjct: 180 FDFLSPWE 187
>sp|C0RIE1|NUOC_BRUMB NADH-quinone oxidoreductase subunit C OS=Brucella melitensis
biotype 2 (strain ATCC 23457) GN=nuoC PE=3 SV=1
Length = 202
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/188 (54%), Positives = 127/188 (67%), Gaps = 1/188 (0%)
Query: 50 VARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLV 109
++ L + Y E L IE+ + G EL L + ++ VL FL+D QFVNL
Sbjct: 1 MSEEALGELSGYIRERLGDAIEEANLAYG-ELTLCVPVASLIGVLTFLRDDVQCQFVNLT 59
Query: 110 DIAGMDVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWD 169
DI+G+D P R RF+++Y LLS R N RIRVK DE T + SA VF A WYERE +D
Sbjct: 60 DISGVDYPQREKRFDVVYQLLSPRQNQRIRVKVQADEDTLVPSAVPVFFGAEWYEREAYD 119
Query: 170 MFGVYFSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRK 229
M+G+ FS HPDLRRILTDYGFEGHP RKDFPL+G+VEVRY+DE KRVV EP++L QEFR
Sbjct: 120 MYGILFSGHPDLRRILTDYGFEGHPLRKDFPLTGFVEVRYNDELKRVVYEPVQLRQEFRN 179
Query: 230 FQLETPWE 237
F +PWE
Sbjct: 180 FDFLSPWE 187
>sp|A9MAI1|NUOC_BRUC2 NADH-quinone oxidoreductase subunit C OS=Brucella canis (strain
ATCC 23365 / NCTC 10854) GN=nuoC PE=3 SV=1
Length = 202
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/188 (54%), Positives = 127/188 (67%), Gaps = 1/188 (0%)
Query: 50 VARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLV 109
++ L + Y E L IE+ + G EL L + ++ VL FL+D QFVNL
Sbjct: 1 MSEEALGELSGYIRERLGDAIEEANLAYG-ELTLCVPVASLIGVLTFLRDDVQCQFVNLT 59
Query: 110 DIAGMDVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWD 169
DI+G+D P R RF+++Y LLS R N RIRVK DE T + SA VF A WYERE +D
Sbjct: 60 DISGVDYPQREKRFDVVYQLLSPRQNQRIRVKVQADEDTLVPSAVPVFFGAEWYEREAYD 119
Query: 170 MFGVYFSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRK 229
M+G+ FS HPDLRRILTDYGFEGHP RKDFPL+G+VEVRY+DE KRVV EP++L QEFR
Sbjct: 120 MYGILFSGHPDLRRILTDYGFEGHPLRKDFPLTGFVEVRYNDELKRVVYEPVQLRQEFRN 179
Query: 230 FQLETPWE 237
F +PWE
Sbjct: 180 FDFLSPWE 187
>sp|Q98KQ7|NUOC_RHILO NADH-quinone oxidoreductase subunit C OS=Rhizobium loti (strain
MAFF303099) GN=nuoC PE=3 SV=1
Length = 201
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 127/185 (68%), Gaps = 1/185 (0%)
Query: 53 SHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIA 112
+ L + Y E L + I G EL + + P ++ V+ FL+D QF++++D+
Sbjct: 3 ASLSELSTYLGERLIGRVNDADIAYG-ELTMHVEPRNLIEVVTFLRDDQRCQFISIIDVC 61
Query: 113 GMDVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFG 172
G D PSRP RF+++Y+LLS + N RIR+K DE T + S VF A+W+ERE +D++G
Sbjct: 62 GADYPSRPKRFDVVYHLLSPKQNVRIRLKVQADEETMVPSITGVFPGADWFERETYDLYG 121
Query: 173 VYFSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQL 232
V FS HPDLRR+LTDYGFEGHP RKDFPL+G+VEVRYDDE KRV+ EP+EL QEFR F
Sbjct: 122 VLFSGHPDLRRLLTDYGFEGHPLRKDFPLTGFVEVRYDDEAKRVIYEPVELKQEFRNFDF 181
Query: 233 ETPWE 237
+PWE
Sbjct: 182 LSPWE 186
>sp|A9W1N1|NUOC_METEP NADH-quinone oxidoreductase subunit C OS=Methylobacterium
extorquens (strain PA1) GN=nuoC PE=3 SV=1
Length = 219
Score = 205 bits (521), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/207 (50%), Positives = 134/207 (64%), Gaps = 4/207 (1%)
Query: 31 ATTANTTEARPTIRKPIDEVARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGV 90
A T N R T+ E A L G+ A L + + IT G EL L++ +
Sbjct: 3 AITTNGITLRRTVAAVQGEDA---LRAMGERIAGALGPAVTEWAITRG-ELTLVVQGSDI 58
Query: 91 VPVLQFLKDHHTAQFVNLVDIAGMDVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPL 150
V L +L+D F +DI G+D P R RF+++Y+LLSLR+N R+RVK TD TP+
Sbjct: 59 VYALTYLRDEPACAFRCFIDICGVDYPQRARRFDVVYHLLSLRHNMRVRVKVQTDAATPV 118
Query: 151 DSANEVFKAANWYEREIWDMFGVYFSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYD 210
SA VF AANWYERE +D++G+ FS HPDLRR+LTDYGFEGHP RKDFPL+G+VEVRYD
Sbjct: 119 PSAIPVFPAANWYERETYDLYGILFSGHPDLRRLLTDYGFEGHPLRKDFPLTGFVEVRYD 178
Query: 211 DEKKRVVVEPLELAQEFRKFQLETPWE 237
++ RVV EP++L QEFR F +PWE
Sbjct: 179 QDEARVVYEPVKLTQEFRNFDFLSPWE 205
>sp|B9JD44|NUOC_AGRRK NADH-quinone oxidoreductase subunit C OS=Agrobacterium radiobacter
(strain K84 / ATCC BAA-868) GN=nuoC PE=3 SV=1
Length = 200
Score = 204 bits (519), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 96/183 (52%), Positives = 123/183 (67%), Gaps = 1/183 (0%)
Query: 55 LVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGM 114
L + Y E+ I +I G EL + E V+ +L FL+D FVN+ DI G+
Sbjct: 5 LNELATYLTEVRGALISSSEIKYG-ELNVTTTAENVIALLTFLRDDAKCGFVNMTDICGV 63
Query: 115 DVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVY 174
D P RP+RF+++Y+LLS + N RIR+K E P+ SA ++ A+W+ERE WDM+GV
Sbjct: 64 DWPQRPDRFDVVYHLLSPKKNLRIRIKVPVAEDQPVPSACGIYPGADWFERETWDMYGVL 123
Query: 175 FSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLET 234
F+ HPDLRRILTDYGFEGHP RKDFP +G+VEVRYDD KRVV EP+EL QEFR F +
Sbjct: 124 FTGHPDLRRILTDYGFEGHPLRKDFPTTGFVEVRYDDAAKRVVYEPVELKQEFRNFDFLS 183
Query: 235 PWE 237
PWE
Sbjct: 184 PWE 186
>sp|Q57DU9|NUOC_BRUAB NADH-quinone oxidoreductase subunit C OS=Brucella abortus biovar 1
(strain 9-941) GN=nuoC PE=3 SV=1
Length = 202
Score = 203 bits (517), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 102/188 (54%), Positives = 126/188 (67%), Gaps = 1/188 (0%)
Query: 50 VARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLV 109
++ L + Y E L IE+ + G EL L + ++ VL L+D QFVNL
Sbjct: 1 MSEEALGELSGYIRERLGDAIEEANLAYG-ELTLCVPVASLIGVLTLLRDDVQCQFVNLT 59
Query: 110 DIAGMDVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWD 169
DI+G+D P R RF+++Y LLS R N RIRVK DE T + SA VF A WYERE +D
Sbjct: 60 DISGVDYPQREKRFDVVYQLLSPRQNQRIRVKVQADEDTLVPSAVPVFFGAEWYEREAYD 119
Query: 170 MFGVYFSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRK 229
M+G+ FS HPDLRRILTDYGFEGHP RKDFPL+G+VEVRY+DE KRVV EP++L QEFR
Sbjct: 120 MYGILFSGHPDLRRILTDYGFEGHPLRKDFPLTGFVEVRYNDELKRVVYEPVQLRQEFRN 179
Query: 230 FQLETPWE 237
F +PWE
Sbjct: 180 FDFLSPWE 187
>sp|Q2YNC7|NUOC_BRUA2 NADH-quinone oxidoreductase subunit C OS=Brucella abortus (strain
2308) GN=nuoC PE=3 SV=1
Length = 202
Score = 203 bits (517), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 102/188 (54%), Positives = 126/188 (67%), Gaps = 1/188 (0%)
Query: 50 VARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLV 109
++ L + Y E L IE+ + G EL L + ++ VL L+D QFVNL
Sbjct: 1 MSEEALGELSGYIRERLGDAIEEANLAYG-ELTLCVPVASLIGVLTLLRDDVQCQFVNLT 59
Query: 110 DIAGMDVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWD 169
DI+G+D P R RF+++Y LLS R N RIRVK DE T + SA VF A WYERE +D
Sbjct: 60 DISGVDYPQREKRFDVVYQLLSPRQNQRIRVKVQADEDTLVPSAVPVFFGAEWYEREAYD 119
Query: 170 MFGVYFSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRK 229
M+G+ FS HPDLRRILTDYGFEGHP RKDFPL+G+VEVRY+DE KRVV EP++L QEFR
Sbjct: 120 MYGILFSGHPDLRRILTDYGFEGHPLRKDFPLTGFVEVRYNDELKRVVYEPVQLRQEFRN 179
Query: 230 FQLETPWE 237
F +PWE
Sbjct: 180 FDFLSPWE 187
>sp|B2S545|NUOC_BRUA1 NADH-quinone oxidoreductase subunit C OS=Brucella abortus (strain
S19) GN=nuoC PE=3 SV=1
Length = 202
Score = 203 bits (517), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 102/188 (54%), Positives = 126/188 (67%), Gaps = 1/188 (0%)
Query: 50 VARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLV 109
++ L + Y E L IE+ + G EL L + ++ VL L+D QFVNL
Sbjct: 1 MSEEALGELSGYIRERLGDAIEEANLAYG-ELTLCVPVASLIGVLTLLRDDVQCQFVNLT 59
Query: 110 DIAGMDVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWD 169
DI+G+D P R RF+++Y LLS R N RIRVK DE T + SA VF A WYERE +D
Sbjct: 60 DISGVDYPQREKRFDVVYQLLSPRQNQRIRVKVQADEDTLVPSAVPVFFGAEWYEREAYD 119
Query: 170 MFGVYFSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRK 229
M+G+ FS HPDLRRILTDYGFEGHP RKDFPL+G+VEVRY+DE KRVV EP++L QEFR
Sbjct: 120 MYGILFSGHPDLRRILTDYGFEGHPLRKDFPLTGFVEVRYNDELKRVVYEPVQLRQEFRN 179
Query: 230 FQLETPWE 237
F +PWE
Sbjct: 180 FDFLSPWE 187
>sp|O68854|NUOC1_RHIME NADH-quinone oxidoreductase subunit C 1 OS=Rhizobium meliloti
(strain 1021) GN=nuoC1 PE=3 SV=2
Length = 201
Score = 201 bits (510), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 125/183 (68%), Gaps = 1/183 (0%)
Query: 55 LVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGM 114
L + Y E I ++ G EL + E ++ +L FL+D FV+ +D+ G+
Sbjct: 5 LNELASYLREARGALIADAEVKYG-ELTVTAKAENLIALLTFLRDDVQCGFVSFIDVCGV 63
Query: 115 DVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVY 174
D P RP+RF+++Y+LLS R N R+RVK T E P+ SA VF A+W+ERE +DM+G+
Sbjct: 64 DYPQRPDRFDVVYHLLSPRQNQRVRVKVATGENDPVPSATSVFPGADWFEREAYDMYGIL 123
Query: 175 FSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLET 234
F+ HPDLRRILTDYGFEG+P RKDFPL+G+VEVRYD+E KRVV EP+EL QEFR F +
Sbjct: 124 FTGHPDLRRILTDYGFEGYPLRKDFPLTGFVEVRYDNEAKRVVYEPVELKQEFRNFDFLS 183
Query: 235 PWE 237
PWE
Sbjct: 184 PWE 186
>sp|Q6FZY9|NUOC_BARQU NADH-quinone oxidoreductase subunit C OS=Bartonella quintana
(strain Toulouse) GN=nuoC PE=3 SV=1
Length = 202
Score = 201 bits (510), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 133/210 (63%), Gaps = 12/210 (5%)
Query: 55 LVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGM 114
LV+ Y L +E+ + G EL ++ + + VL F++D QF+NL DI+G+
Sbjct: 5 LVELSAYLKNKLGDKLEETILAFG-ELTIVSRLDAITGVLMFVRDDSRCQFINLTDISGV 63
Query: 115 DVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVY 174
D PSR RF++ Y LL+ R+N R+R+K TDE TP+ SA ++ A WYERE +DM+G+
Sbjct: 64 DYPSRDKRFDVSYQLLAPRHNLRLRIKVRTDENTPVASACSIYPGAEWYEREAYDMYGIL 123
Query: 175 FSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLET 234
FS HPDLRRILTDYGFEGHP RKDFP++G+VE RYD+E KRV+ EP+ L QE R F +
Sbjct: 124 FSGHPDLRRILTDYGFEGHPLRKDFPVTGFVECRYDNEAKRVIYEPVVLRQEMRNFDFLS 183
Query: 235 PWEQFPNFRNTPGSSGSEEIPLDEKKEEEK 264
PWE +P +EK E EK
Sbjct: 184 PWE-----------GAQYVLPCNEKAEGEK 202
>sp|B1ZA44|NUOC_METPB NADH-quinone oxidoreductase subunit C OS=Methylobacterium populi
(strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=nuoC PE=3
SV=1
Length = 219
Score = 200 bits (509), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 131/208 (62%), Gaps = 5/208 (2%)
Query: 30 AATTANTTEARPTIRKPIDEVARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEG 89
A TT T R D+ R+ G+ L + I G EL L++
Sbjct: 3 AITTNGITLRRTVAAAQGDDALRA----MGERITGALGPAVTDWSIAHG-ELTLIVQGSD 57
Query: 90 VVPVLQFLKDHHTAQFVNLVDIAGMDVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTP 149
+V L +L+D F +DI G+D P R RF+++Y+LLSLR+N R+RVK TD TP
Sbjct: 58 IVYALTYLRDDPNCAFRCFIDICGVDYPQRARRFDVVYHLLSLRHNMRVRVKVQTDAATP 117
Query: 150 LDSANEVFKAANWYEREIWDMFGVYFSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRY 209
+ SA VF AANW+ERE +D++G+ FS HPDLRR+LTDYGFEGHP RKDFPL+G+VEVRY
Sbjct: 118 VPSAIPVFPAANWFERETYDLYGILFSGHPDLRRLLTDYGFEGHPLRKDFPLTGFVEVRY 177
Query: 210 DDEKKRVVVEPLELAQEFRKFQLETPWE 237
D ++ RVV EP++L QEFR F +PWE
Sbjct: 178 DQDEARVVYEPVKLTQEFRNFDFLSPWE 205
>sp|A9IUQ0|NUOC_BART1 NADH-quinone oxidoreductase subunit C OS=Bartonella tribocorum
(strain CIP 105476 / IBS 506) GN=nuoC PE=3 SV=1
Length = 203
Score = 200 bits (508), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 133/210 (63%), Gaps = 12/210 (5%)
Query: 55 LVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGM 114
LV+ Y L +E+ G EL ++ + + VL F++D QF+NL DI+G+
Sbjct: 6 LVELATYLKNKLGNKLEETVFAFG-ELTIVARLDAITDVLMFVRDDSHCQFINLTDISGV 64
Query: 115 DVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVY 174
D PSR RF++ Y LLS R N R+RVK TDE TP+ SA V+ A WYERE +DM+G+
Sbjct: 65 DYPSRDKRFDVSYQLLSPRENLRLRVKVRTDENTPVASACTVYPGAEWYERETYDMYGIL 124
Query: 175 FSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLET 234
FS HPDLRRILTDYGFEG+P RKDFP++G+VE RYD+E KRV+ EP+ L QE R F +
Sbjct: 125 FSGHPDLRRILTDYGFEGYPLRKDFPVTGFVECRYDNEAKRVIYEPVVLRQEMRNFDFLS 184
Query: 235 PWEQFPNFRNTPGSSGSEEIPLDEKKEEEK 264
PWE G +P D K++E+K
Sbjct: 185 PWE-----------GGQYVLPCDGKEDEKK 203
>sp|Q0C1E5|NUOC_HYPNA NADH-quinone oxidoreductase subunit C OS=Hyphomonas neptunium
(strain ATCC 15444) GN=nuoC PE=3 SV=1
Length = 202
Score = 199 bits (507), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 134/208 (64%), Gaps = 12/208 (5%)
Query: 55 LVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGM 114
L D + +P + QI G EL LL + +VP+L+FL+D F +D+ G+
Sbjct: 6 LSDLAAHIEGRMPDAVRSWQIHVG-ELTLLAERDHIVPLLRFLRDDQQCNFETFIDVCGV 64
Query: 115 DVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVY 174
D P R RFE++Y+LLS+R N RIRV+ TDE T + S ++ AANW+ERE +DM+G+
Sbjct: 65 DYPERSERFEVVYHLLSMRMNHRIRVRIRTDEETAVPSVVSLWPAANWFEREAFDMYGIQ 124
Query: 175 FSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLET 234
F++HPDLRRILTDYGFEG P RKDFPL+G+ EVRYDD +KRV+ EP++LAQE+R F +
Sbjct: 125 FADHPDLRRILTDYGFEGWPLRKDFPLTGHYEVRYDDLEKRVIYEPVKLAQEYRNFDFLS 184
Query: 235 PWEQFPNFRNTPGSSGSEEIPLDEKKEE 262
PWE IP DEK +E
Sbjct: 185 PWEGMTTV-----------IPGDEKAKE 201
>sp|A7HY47|NUOC_PARL1 NADH-quinone oxidoreductase subunit C OS=Parvibaculum
lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)
GN=nuoC PE=3 SV=1
Length = 200
Score = 198 bits (503), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 136/208 (65%), Gaps = 14/208 (6%)
Query: 55 LVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGM 114
L + G++ L + + + G EL +L + + VL+FL+D +F L+DI +
Sbjct: 5 LAELGEHILGTLEESVLGFHVAFG-ELNVLAQAQSIARVLKFLRDDPACRFGTLLDITAV 63
Query: 115 DVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVY 174
D P RP RF+++Y+LLS+ N RIRV T+E T + S V+ +ANWYERE +DM+GV
Sbjct: 64 DYPQRPERFDVVYHLLSMHQNQRIRVTVRTNEETAVPSVVAVYPSANWYERETFDMYGVL 123
Query: 175 FSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLET 234
FS+HPDLRRILTDYGF G+P RKDFPL+GYVEVRYDD++KRVV EP++L QEFR F +
Sbjct: 124 FSDHPDLRRILTDYGFNGYPLRKDFPLTGYVEVRYDDDEKRVVYEPVKLVQEFRNFDFMS 183
Query: 235 PWEQFPNFRNTPGSSGSEE-IPLDEKKE 261
PWE G+E +P DEK E
Sbjct: 184 PWE------------GAEYLLPGDEKAE 199
>sp|A6U7W5|NUOC_SINMW NADH-quinone oxidoreductase subunit C OS=Sinorhizobium medicae
(strain WSM419) GN=nuoC PE=3 SV=1
Length = 201
Score = 198 bits (503), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 93/183 (50%), Positives = 124/183 (67%), Gaps = 1/183 (0%)
Query: 55 LVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGM 114
L + Y E + ++ G EL L E ++ +L FL+D FV+ +D+ G+
Sbjct: 5 LNELASYIREARGALVAGSEVRYG-ELTLTTKAESLIALLTFLRDDVQCGFVSFIDVCGV 63
Query: 115 DVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVY 174
D P RP+RF+++Y+LLS R N RIRVK T E P+ S V+ A+W+ERE +DM+G+
Sbjct: 64 DYPQRPDRFDVVYHLLSPRQNQRIRVKVATGENEPVPSITSVYPGADWFEREAYDMYGIL 123
Query: 175 FSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLET 234
F+ HPDLRRILTDYGFEG+P RKDFPL+G+VEVRYD+E KRVV EP+EL QEFR F +
Sbjct: 124 FTGHPDLRRILTDYGFEGYPLRKDFPLTGFVEVRYDNEAKRVVYEPVELKQEFRNFDFLS 183
Query: 235 PWE 237
PWE
Sbjct: 184 PWE 186
>sp|A7IPA5|NUOC_XANP2 NADH-quinone oxidoreductase subunit C OS=Xanthobacter autotrophicus
(strain ATCC BAA-1158 / Py2) GN=nuoC PE=3 SV=1
Length = 209
Score = 197 bits (502), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 124/183 (67%), Gaps = 1/183 (0%)
Query: 55 LVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGM 114
L D + + L + + G EL L I P +V V FL+D F +VD+ G+
Sbjct: 5 LNDLAAHVSAALSGAVLGSLVAHG-ELTLQIDPAQIVKVATFLRDDPACLFHCIVDVCGV 63
Query: 115 DVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVY 174
D P+R RF+++Y+LLSL+ N RIR+K TDE TP+ S VF ANW+ERE +DM+G+
Sbjct: 64 DYPAREKRFDVVYHLLSLKQNVRIRLKVETDEDTPVPSICSVFPGANWFEREAYDMYGIL 123
Query: 175 FSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLET 234
F+ HP+LRR+LTDYGF+GHP RKDFP +G+VEVRYDDE+KRVV EP+ L QEFR F +
Sbjct: 124 FTGHPELRRLLTDYGFDGHPLRKDFPTTGFVEVRYDDEQKRVVYEPVRLPQEFRNFDFLS 183
Query: 235 PWE 237
PWE
Sbjct: 184 PWE 186
>sp|A1USW9|NUOC_BARBK NADH-quinone oxidoreductase subunit C OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=nuoC PE=3 SV=1
Length = 205
Score = 196 bits (498), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/188 (49%), Positives = 126/188 (67%), Gaps = 1/188 (0%)
Query: 50 VARSHLVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLV 109
+A LV+ Y E L +E+ + G EL ++ + ++ VL F++D QF+N++
Sbjct: 1 MATETLVELAAYLKEKLGDKLEESALAFG-ELTIVSRLDAIIDVLMFIRDDSRCQFINII 59
Query: 110 DIAGMDVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWD 169
DI+G+D P+R RF++ Y LLS N R+RVK TDE P+ S V+ A WYERE +D
Sbjct: 60 DISGVDYPARDKRFDVSYQLLSPFQNLRLRVKVRTDEDVPVPSVCSVYPGAEWYERETYD 119
Query: 170 MFGVYFSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRK 229
M+G+ FS HPDLRRILTDYGFEGHP RKDFP++G+VE RYD+E KRV+ EP+ L QE R
Sbjct: 120 MYGILFSGHPDLRRILTDYGFEGHPLRKDFPVTGFVECRYDNEAKRVIYEPVVLRQEMRN 179
Query: 230 FQLETPWE 237
F +PWE
Sbjct: 180 FDFLSPWE 187
>sp|A8I3Y9|NUOC_AZOC5 NADH-quinone oxidoreductase subunit C OS=Azorhizobium caulinodans
(strain ATCC 43989 / DSM 5975 / ORS 571) GN=nuoC PE=3
SV=1
Length = 211
Score = 194 bits (494), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 124/183 (67%), Gaps = 1/183 (0%)
Query: 55 LVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGM 114
L D + LP + +I G EL L P+ ++ + FL+D + F +VD+ G
Sbjct: 5 LKDLAAHVTGALPGAVVAHKIAYG-ELTLETTPDHILKLATFLRDDPSCLFTCIVDVCGA 63
Query: 115 DVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVY 174
D P+R RFE++Y+LLSL+ N+R+RVK E T + S ++ ANW+ERE +D++G+
Sbjct: 64 DYPAREQRFEVVYHLLSLKQNARVRVKLSAGEETLVPSVTGIWPGANWFEREAYDLYGIL 123
Query: 175 FSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLET 234
F+ HP+LRR+LTDYGF+GHP RKDFPL+G+VEVRYDDE KRVV EP+ LAQEFR F +
Sbjct: 124 FTGHPELRRLLTDYGFDGHPLRKDFPLTGFVEVRYDDELKRVVYEPVRLAQEFRNFDFLS 183
Query: 235 PWE 237
PWE
Sbjct: 184 PWE 186
>sp|Q6G390|NUOC_BARHE NADH-quinone oxidoreductase subunit C OS=Bartonella henselae
(strain ATCC 49882 / Houston 1) GN=nuoC PE=3 SV=1
Length = 202
Score = 194 bits (493), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 134/211 (63%), Gaps = 14/211 (6%)
Query: 55 LVDFGKYCAEILPKYIEKVQITSGDELELLIIPEGVVPVLQFLKDHHTAQFVNLVDIAGM 114
L + Y L +E+ + G EL ++ + + VL F++D QF+N+ DI+G+
Sbjct: 5 LEELAAYLKSKLGDKLEETVLAFG-ELTIVSRLDAITDVLIFVRDDSRCQFINITDISGV 63
Query: 115 DVPSRPNRFEIIYNLLSLRYNSRIRVKTYTDELTPLDSANEVFKAANWYEREIWDMFGVY 174
D P R RF++ Y LLS R+N R+RVK TDE P+ SA ++ A WYERE +DM+G+
Sbjct: 64 DYPCRDKRFDVSYQLLSPRHNLRLRVKVRTDENIPVASACSIYPGAEWYERETYDMYGIL 123
Query: 175 FSNHPDLRRILTDYGFEGHPFRKDFPLSGYVEVRYDDEKKRVVVEPLELAQEFRKFQLET 234
FS HPDLRRILTDYGFEGHP RKDFP++G+VE RYD+E KRV+ EP+ L QE R F +
Sbjct: 124 FSGHPDLRRILTDYGFEGHPLRKDFPVTGFVECRYDNEAKRVIYEPVVLRQEMRNFDFLS 183
Query: 235 PWEQFPNFRNTPGSSGSEEI-PLDEKKEEEK 264
PWE G++ I P DEK ++++
Sbjct: 184 PWE------------GAQYILPCDEKTKDKR 202
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,317,918
Number of Sequences: 539616
Number of extensions: 4527124
Number of successful extensions: 11748
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 11025
Number of HSP's gapped (non-prelim): 515
length of query: 265
length of database: 191,569,459
effective HSP length: 115
effective length of query: 150
effective length of database: 129,513,619
effective search space: 19427042850
effective search space used: 19427042850
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)