RPS-BLAST 2.2.26 [Sep-21-2011]

Database: CDD.v3.10 
           44,354 sequences; 10,937,602 total letters

Searching..................................................done

Query= psy15775
         (191 letters)



>gnl|CDD|215689 pfam00067, p450, Cytochrome P450.  Cytochrome P450s are
           haem-thiolate proteins involved in the oxidative
           degradation of various compounds. They are particularly
           well known for their role in the degradation of
           environmental toxins and mutagens. They can be divided
           into 4 classes, according to the method by which
           electrons from NAD(P)H are delivered to the catalytic
           site. Sequence conservation is relatively low within the
           family - there are only 3 absolutely conserved residues
           - but their general topography and structural fold are
           highly conserved. The conserved core is composed of a
           coil termed the 'meander', a four-helix bundle, helices
           J and K, and two sets of beta-sheets. These constitute
           the haem-binding loop (with an absolutely conserved
           cysteine that serves as the 5th ligand for the haem
           iron), the proton-transfer groove and the absolutely
           conserved EXXR motif in helix K. While prokaryotic P450s
           are soluble proteins, most eukaryotic P450s are
           associated with microsomal membranes. their general
           enzymatic function is to catalyze regiospecific and
           stereospecific oxidation of non-activated hydrocarbons
           at physiological temperatures.
          Length = 461

 Score =  106 bits (266), Expect = 3e-27
 Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 11/120 (9%)

Query: 66  REYLLPVGCMLNIEIVSLHRCADQYPNPEVFQPDNFLPENVQKRHNYSYIPFSAGPRNCI 125
             YL+P G ++ + + +LHR  + +PNPE F P+ FL EN + R +++++PF AGPRNC+
Sbjct: 352 PGYLIPKGTLVIVNLYALHRDPEVFPNPEEFDPERFLDENGKFRKSFAFLPFGAGPRNCL 411

Query: 126 GEVVEDIIYESQKFALLEEKCVLASILRKFKVISLEKLDDVTIMI-DLILRPASGVKVKL 184
           GE          + A +E K  LA++L+ F+V      D   I     +L P    K+K 
Sbjct: 412 GE----------RLARMEMKLFLATLLQNFEVELPPGTDPPDIDETPGLLLPPKPYKLKF 461



 Score = 34.6 bits (80), Expect = 0.027
 Identities = 9/36 (25%), Positives = 18/36 (50%)

Query: 6   LWPSLIFGLTRDGKRHEENLKILHGFTRRVIEERKA 41
           L+P L +     G++ +   K +     ++IEER+ 
Sbjct: 194 LFPILKYFPGPHGRKLKRARKKIKDLLDKLIEERRE 229


>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional.
          Length = 482

 Score = 68.6 bits (168), Expect = 6e-14
 Identities = 45/138 (32%), Positives = 65/138 (47%), Gaps = 24/138 (17%)

Query: 58  FGEP------ILTAREYLLPVGCMLNIEIVSLHRCADQYPNPEVFQPDNFLPENVQKRHN 111
           FG P      I+    + +P    + I   SL R    + NPE F P  FL  +     N
Sbjct: 361 FGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD----SN 416

Query: 112 YSYIPFSAGPRNCIGEVVEDIIYESQKFALLEEKCVLASILRKFKVISLE--KLDDVTIM 169
            +++PFS GPRNC+G          Q+FA  E     ++I+  FK+ S++  K+D+ T  
Sbjct: 417 DAFMPFSIGPRNCVG----------QQFAQDELYLAFSNIILNFKLKSIDGKKIDE-TEE 465

Query: 170 IDLILRPASGVKVKLEPR 187
             L L+P    KV LE R
Sbjct: 466 YGLTLKPNK-FKVLLEKR 482


>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis,
           transport, and catabolism].
          Length = 411

 Score = 61.3 bits (149), Expect = 2e-11
 Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 19/119 (15%)

Query: 68  YLLPVGCMLNIEIVSLHRCADQYPNPEVFQPDNFLPENVQKRHNYSYIPFSAGPRNCIGE 127
           Y +P G ++ + I + +R  + +P+P+ F P+         R N +++PF  GP  C+G 
Sbjct: 312 YRIPAGTVVLLSIGAANRDPEVFPDPDEFDPE---------RFNNAHLPFGGGPHRCLG- 361

Query: 128 VVEDIIYESQKFALLEEKCVLASILRKFKVISLEKLDDVTIMIDLILRPASGVKVKLEP 186
                       A LE K  LA +LR+F ++ L +   +     L+ R    + V+   
Sbjct: 362 ---------AALARLELKVALAELLRRFPLLLLAEPPPLVRRPTLVPRGGERLPVRRRR 411


>gnl|CDD|178524 PLN02936, PLN02936, epsilon-ring hydroxylase.
          Length = 489

 Score = 60.6 bits (147), Expect = 4e-11
 Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 22/109 (20%)

Query: 61  PILTARE---------YLLPVGCMLNIEIVSLHRCADQYPNPEVFQPDNFLPENVQKRH- 110
           P+L  R          Y +  G  + I + ++HR  + +   E F P+ F  +       
Sbjct: 354 PVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNET 413

Query: 111 --NYSYIPFSAGPRNCIGEVVEDIIYESQKFALLEEKCVLASILRKFKV 157
             ++ YIPFS GPR C+G+          +FALLE    LA +L++  +
Sbjct: 414 NTDFRYIPFSGGPRKCVGD----------QFALLEAIVALAVLLQRLDL 452


>gnl|CDD|215164 PLN02290, PLN02290, cytokinin trans-hydroxylase.
          Length = 516

 Score = 59.4 bits (144), Expect = 1e-10
 Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 26/124 (20%)

Query: 70  LPVGCMLNIEIVSLHRC-------ADQYPNPEVFQPDNFLPENVQKRHNYSYIPFSAGPR 122
           +P G  + I ++++H         A+++ NP+ F    F P     RH   +IPF+AGPR
Sbjct: 409 IPKGLSIWIPVLAIHHSEELWGKDANEF-NPDRFAGRPFAP----GRH---FIPFAAGPR 460

Query: 123 NCIGEVVEDIIYESQKFALLEEKCVLASILRKFKVISLEKLDDVTIMIDLILRPASGVKV 182
           NCIG          Q FA++E K +LA ++ KF     +      +++ L ++P  GV+V
Sbjct: 461 NCIG----------QAFAMMEAKIILAMLISKFSFTISDNYRHAPVVV-LTIKPKYGVQV 509

Query: 183 KLEP 186
            L+P
Sbjct: 510 CLKP 513


>gnl|CDD|215393 PLN02738, PLN02738, carotene beta-ring hydroxylase.
          Length = 633

 Score = 52.6 bits (126), Expect = 2e-08
 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 13/81 (16%)

Query: 78  IEIVSLHRCADQYPNPEVFQPDNFL---PENVQKRHNYSYIPFSAGPRNCIGEVVEDIIY 134
           I + +LHR    + + E F P+ +    P   +   N+SY+PF  GPR C+G++      
Sbjct: 492 ISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDM------ 545

Query: 135 ESQKFALLEEKCVLASILRKF 155
               FA  E     A ++R+F
Sbjct: 546 ----FASFENVVATAMLVRRF 562


>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase.
          Length = 517

 Score = 44.8 bits (106), Expect = 8e-06
 Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 5/64 (7%)

Query: 68  YLLPVGCMLNIEIVSLHRCADQYPNPEVFQPDNFLP----ENVQ-KRHNYSYIPFSAGPR 122
           Y +P G  L + + ++ R  +Q+P+P  F+PD FLP      V  K  ++  IPF AG R
Sbjct: 390 YHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRR 449

Query: 123 NCIG 126
            C G
Sbjct: 450 ICAG 453


>gnl|CDD|177826 PLN02169, PLN02169, fatty acid (omega-1)-hydroxylase/midchain
           alkane hydroxylase.
          Length = 500

 Score = 45.0 bits (106), Expect = 9e-06
 Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 17/96 (17%)

Query: 96  FQPDNFLPENVQKRH--NYSYIPFSAGPRNCIGEVVEDIIYESQKFALLEEKCVLASILR 153
           F+P+ ++ +N   RH  +Y ++ F++GPR C+G          +  ALL+ K V   I++
Sbjct: 417 FKPERWISDNGGLRHEPSYKFMAFNSGPRTCLG----------KHLALLQMKIVALEIIK 466

Query: 154 K--FKVISLEKLDDVTIMIDLILRPASGVKVKLEPR 187
              FKVI   K++ +     ++LR   G+KV +  +
Sbjct: 467 NYDFKVIEGHKIEAIP---SILLRMKHGLKVTVTKK 499


>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1.
          Length = 502

 Score = 44.4 bits (104), Expect = 1e-05
 Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 2/61 (3%)

Query: 68  YLLPVGCMLNIEIVSLHRCADQY-PNPEVFQPDNFLPENVQ-KRHNYSYIPFSAGPRNCI 125
           Y +P G  +N+   ++ R   ++ PNP+ F+P+ FL + V  K  +Y +IPF +G R C 
Sbjct: 384 YDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCP 443

Query: 126 G 126
           G
Sbjct: 444 G 444


>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H);
           Provisional.
          Length = 504

 Score = 44.1 bits (104), Expect = 1e-05
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 68  YLLPVGCMLNIEIVSLHRCADQYPNPEVFQPDNFLPE---NVQKRHN-YSYIPFSAGPRN 123
           Y +P    L++ I ++ R  D + NPE F+P+ FL E    +  R N +  IPF AG R 
Sbjct: 382 YYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRI 441

Query: 124 CIG 126
           C G
Sbjct: 442 CAG 444


>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase.
          Length = 466

 Score = 38.6 bits (90), Expect = 0.001
 Identities = 19/59 (32%), Positives = 28/59 (47%)

Query: 68  YLLPVGCMLNIEIVSLHRCADQYPNPEVFQPDNFLPENVQKRHNYSYIPFSAGPRNCIG 126
           Y +P G  + I I   +    ++ NPE + P+ FL E  +    Y  + F AG R C G
Sbjct: 354 YDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYESADMYKTMAFGAGKRVCAG 412


>gnl|CDD|215235 PLN02426, PLN02426, cytochrome P450, family 94, subfamily C
           protein.
          Length = 502

 Score = 37.7 bits (88), Expect = 0.002
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 21/73 (28%)

Query: 91  PNPEVFQPDN------FLPENVQKRHNYSYIPFSAGPRNCIGEVVEDIIYESQKFALLEE 144
           P+   F+P+       F+PEN      + Y  F AG R C+G          ++ AL+E 
Sbjct: 411 PDCLEFKPERWLKNGVFVPENP-----FKYPVFQAGLRVCLG----------KEMALMEM 455

Query: 145 KCVLASILRKFKV 157
           K V  +++R+F +
Sbjct: 456 KSVAVAVVRRFDI 468


>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional.
          Length = 514

 Score = 36.3 bits (84), Expect = 0.007
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 5/64 (7%)

Query: 68  YLLPVGCMLNIEIVSLHRCADQYPNPEVFQPDNFLP---ENVQKRH--NYSYIPFSAGPR 122
           Y +P    + I    L R    + + E F+P+   P     V+  H  ++  +PFSAG R
Sbjct: 389 YYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKR 448

Query: 123 NCIG 126
            C G
Sbjct: 449 KCPG 452


>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase.
          Length = 516

 Score = 36.0 bits (83), Expect = 0.007
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)

Query: 68  YLLPVGCMLNIEIVSLHRCADQYPNPEVFQPDNFLPENVQ--KRHNYSYIPFSAGPRNCI 125
           Y +P    + I   ++ R  + + +P+ F+P  FL   V   K  ++ +IPF +G R+C 
Sbjct: 396 YFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCP 455

Query: 126 G 126
           G
Sbjct: 456 G 456


>gnl|CDD|177847 PLN02196, PLN02196, abscisic acid 8'-hydroxylase.
          Length = 463

 Score = 35.7 bits (82), Expect = 0.012
 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 14/97 (14%)

Query: 32  TRRVIEE--RKAARAAGGVREGNDLDENFGEPILTAREYLLPVGCMLNIEIVSLHRCADQ 89
           T RVI+E  R A+  +   RE  +  E  G        YL+P G  +     ++H  AD 
Sbjct: 329 TSRVIQETLRVASILSFTFREAVEDVEYEG--------YLIPKGWKVLPLFRNIHHSADI 380

Query: 90  YPNPEVFQPDNFLPENVQKRHNYSYIPFSAGPRNCIG 126
           + +P  F P  F    V  + N +++PF  G  +C G
Sbjct: 381 FSDPGKFDPSRF---EVAPKPN-TFMPFGNGTHSCPG 413


>gnl|CDD|215627 PLN03195, PLN03195, fatty acid omega-hydroxylase; Provisional.
          Length = 516

 Score = 34.8 bits (80), Expect = 0.024
 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 12/98 (12%)

Query: 91  PNPEVFQPDNFLPENV-QKRHNYSYIPFSAGPRNCIGEVVEDIIYESQKFALLEEKCVLA 149
           P+   F+P+ ++ + V Q    + +  F AGPR C+G          +  A L+ K  LA
Sbjct: 429 PDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLG----------KDSAYLQMKMALA 478

Query: 150 SILRKFKVISLEKLDDVTIMIDLILRPASGVKVKLEPR 187
            + R FK   L     V   +  IL  A+G+KV +  R
Sbjct: 479 LLCRFFK-FQLVPGHPVKYRMMTILSMANGLKVTVSRR 515


>gnl|CDD|215171 PLN02302, PLN02302, ent-kaurenoic acid oxidase.
          Length = 490

 Score = 33.1 bits (76), Expect = 0.079
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 68  YLLPVGCMLNIEIVSLHRCADQYPNPEVFQPDNFLPENVQKRHNYSYIPFSAGPRNCIG 126
           Y +P G  +      +H   + YPNP+ F P  +     +     +++PF  G R C G
Sbjct: 383 YTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYTPKA---GTFLPFGLGSRLCPG 438


>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase.
          Length = 503

 Score = 32.4 bits (74), Expect = 0.11
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)

Query: 92  NPEVFQPDNFLPENVQKRHN---YSYIPFSAGPRNCIG 126
           NPE F+P+ FL E  +   N   + ++PF  G R+C G
Sbjct: 410 NPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPG 447


>gnl|CDD|215240 PLN02439, PLN02439, arginine decarboxylase.
          Length = 559

 Score = 32.7 bits (75), Expect = 0.11
 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 4/46 (8%)

Query: 147 VLASILRKFKVISLEKLDDVTIMID----LILRPASGVKVKLEPRH 188
           +LA  L    VI LE+ +++ ++I+    L +RP  GV+ KL  +H
Sbjct: 101 LLARKLGLNTVIVLEQEEELDLVIEASQRLGVRPVIGVRAKLRTKH 146


>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional.
          Length = 519

 Score = 31.1 bits (70), Expect = 0.35
 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 6/65 (9%)

Query: 68  YLLPVGCMLNIEIVSLHRCADQYPNPEVFQPDNFLPE------NVQKRHNYSYIPFSAGP 121
           YL+P G  +N  +  + R   ++  P  F P+ FL        +V        +PF  G 
Sbjct: 400 YLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGR 459

Query: 122 RNCIG 126
           R C G
Sbjct: 460 RICAG 464


>gnl|CDD|199208 cd08964, L-asparaginase_II, Type II (periplasmic) bacterial
           L-asparaginase.  Asparaginases (amidohydrolases, E.C.
           3.5.1.1) are enzymes that catalyze the hydrolysis of
           asparagine to aspartic acid and ammonia. In bacteria,
           there are two classes of amidohydrolases. This model
           represents type II L-asparaginases, which tend to be
           highly specific for asparagine and localized to the
           periplasm. They are potent antileukemic agents and have
           been used in the treatment of acute lymphoblastic
           leukemia (ALL), but not without severe side effects.
           Tumor cells appear to have a heightened dependence on
           exogenous L-aspartate, and depleting their surroundings
           of L-aspartate may starve cancerous ALL cells. Type II
           L-asparaginase acts as a tetramer, which is actually a
           dimer of two tightly bound dimers. A conserved threonine
           residue is thought to supply the nucleophile
           hydroxy-group that attacks the amide bond. Many
           bacterial L-asparaginases have both L-asparagine and
           L-glutamine hydrolysis activities, to a different
           degree, and some of them are annotated as
           asparaginase/glutaminase.
          Length = 319

 Score = 30.6 bits (70), Expect = 0.40
 Identities = 7/30 (23%), Positives = 12/30 (40%)

Query: 105 NVQKRHNYSYIPFSAGPRNCIGEVVEDIIY 134
           +V K H  S   F++     +G V    + 
Sbjct: 158 DVTKTHTTSLDAFASPGFGPLGYVDGGKVR 187


>gnl|CDD|184951 PRK14989, PRK14989, nitrite reductase subunit NirD; Provisional.
          Length = 847

 Score = 29.7 bits (67), Expect = 0.90
 Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 6/30 (20%)

Query: 99  DNFLPENVQKRHNYSYIPFSAGPRNCIGEV 128
           DNFL  N+QK   YS IP SAG     GE+
Sbjct: 553 DNFLA-NIQKDGTYSVIPRSAG-----GEI 576


>gnl|CDD|235095 PRK02983, lysS, lysyl-tRNA synthetase; Provisional.
          Length = 1094

 Score = 29.5 bits (67), Expect = 1.1
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 4/29 (13%)

Query: 43   RAAGGVREGNDLDENFGEPILTAREYLLP 71
             AAGG  E  +LDE+F    L A EY +P
Sbjct: 1036 LAAGGDPEAMELDEDF----LQALEYAMP 1060


>gnl|CDD|237826 PRK14829, PRK14829, undecaprenyl pyrophosphate synthase;
           Provisional.
          Length = 243

 Score = 29.0 bits (65), Expect = 1.5
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 15  TRDGKRHEENLKILHGFTRRVIEERKAARAAGGVR 49
           T + KR  + ++ L GF+R VI  R+      GVR
Sbjct: 69  TENWKRSPDEVRFLMGFSRDVIHRRREQMDEWGVR 103


>gnl|CDD|215600 PLN03141, PLN03141, 3-epi-6-deoxocathasterone 23-monooxygenase;
           Provisional.
          Length = 452

 Score = 28.6 bits (64), Expect = 2.2
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 68  YLLPVGCMLNIEIVSLHRCADQYPNPEVFQPDNFLPENVQKRHNYSYIPFSAGPRNCIG 126
           YL+P G  +     S+H   + Y NP  F P  +  +++    N S+ PF  G R C G
Sbjct: 347 YLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDMN---NSSFTPFGGGQRLCPG 402


>gnl|CDD|173288 PRK14827, PRK14827, undecaprenyl pyrophosphate synthase;
           Provisional.
          Length = 296

 Score = 28.0 bits (62), Expect = 2.7
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 7   WPSLIFGLTRDGKRHEENLKILHGFTRRVIEERKAARAAGGVR 49
           W SL    T + KR  E ++ L GF R V+  R+      GVR
Sbjct: 114 WLSLYAFSTENWKRSPEEVRFLMGFNRDVVRRRRDNLNKMGVR 156


>gnl|CDD|178592 PLN03018, PLN03018, homomethionine N-hydroxylase.
          Length = 534

 Score = 27.7 bits (61), Expect = 4.8
 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 6/72 (8%)

Query: 68  YLLPVGCMLNIEIVSLHRCADQYPNPEVFQPDNFLP-ENVQKR-----HNYSYIPFSAGP 121
           Y +P G  +++    L R    + +P V++P+  L  + + K          ++ FS G 
Sbjct: 407 YFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGR 466

Query: 122 RNCIGEVVEDII 133
           R C+G  V  I+
Sbjct: 467 RGCVGVKVGTIM 478


>gnl|CDD|217532 pfam03395, Pox_P4A, Poxvirus P4A protein. 
          Length = 889

 Score = 27.1 bits (60), Expect = 6.7
 Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 6/73 (8%)

Query: 42  ARAAGGVREGNDLDENFGEPILTAREYLLPVGCMLNIEIVSLHRCADQYPNPEVFQPDNF 101
                   E N   ++F E I+   EY  P+  +  +++  +          E+   D F
Sbjct: 603 PNYFYAGMENNLQSDDFIETII---EYSEPINILDRVDLRGI---FSANTLNELLDTDIF 656

Query: 102 LPENVQKRHNYSY 114
            PEN   ++N   
Sbjct: 657 EPENRAFKNNLIA 669


>gnl|CDD|215099 PLN00197, PLN00197, beta-amylase; Provisional.
          Length = 573

 Score = 26.9 bits (59), Expect = 8.3
 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 12/51 (23%)

Query: 55  DENFGEPILTAREYLLPVGCMLNIEIVSLHR--CADQY--PNPEVFQPDNF 101
           D+   E IL A          LNI+  S  R  CA  Y   NP +FQPDN+
Sbjct: 484 DDYAHEQILQASS--------LNIDGNSEDREMCAFTYLRMNPHLFQPDNW 526


  Database: CDD.v3.10
    Posted date:  Mar 20, 2013  7:55 AM
  Number of letters in database: 10,937,602
  Number of sequences in database:  44,354
  
Lambda     K      H
   0.322    0.141    0.427 

Gapped
Lambda     K      H
   0.267   0.0723    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 10,248,330
Number of extensions: 986367
Number of successful extensions: 721
Number of sequences better than 10.0: 1
Number of HSP's gapped: 700
Number of HSP's successfully gapped: 37
Length of query: 191
Length of database: 10,937,602
Length adjustment: 91
Effective length of query: 100
Effective length of database: 6,901,388
Effective search space: 690138800
Effective search space used: 690138800
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (25.4 bits)