Query psy15783
Match_columns 86
No_of_seqs 109 out of 1015
Neff 5.6
Searched_HMMs 29240
Date Fri Aug 16 21:14:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15783.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15783hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nzo_A UDP-N-acetylglucosamine 98.2 2.5E-06 8.4E-11 64.0 6.1 80 4-83 235-354 (399)
2 2z1m_A GDP-D-mannose dehydrata 98.0 4.4E-05 1.5E-09 54.0 9.7 51 3-53 221-271 (345)
3 1t2a_A GDP-mannose 4,6 dehydra 98.0 4.4E-05 1.5E-09 55.4 9.4 49 5-53 252-300 (375)
4 2pk3_A GDP-6-deoxy-D-LYXO-4-he 98.0 1.7E-05 5.9E-10 56.0 6.6 47 4-50 224-271 (321)
5 1n7h_A GDP-D-mannose-4,6-dehyd 97.8 4.5E-05 1.5E-09 55.4 6.4 46 4-49 256-301 (381)
6 3ehe_A UDP-glucose 4-epimerase 97.8 4.5E-05 1.5E-09 53.9 6.1 46 5-50 206-252 (313)
7 1rpn_A GDP-mannose 4,6-dehydra 97.8 4.5E-05 1.5E-09 54.1 6.0 45 5-49 234-278 (335)
8 3enk_A UDP-glucose 4-epimerase 97.8 3.6E-05 1.2E-09 54.8 5.4 46 5-50 239-288 (341)
9 1db3_A GDP-mannose 4,6-dehydra 97.8 6.8E-05 2.3E-09 53.9 6.6 49 5-53 228-276 (372)
10 3ius_A Uncharacterized conserv 97.7 5.3E-05 1.8E-09 52.8 5.6 46 5-50 184-230 (286)
11 4b4o_A Epimerase family protei 97.7 5.4E-05 1.9E-09 53.4 5.3 45 5-49 194-239 (298)
12 4id9_A Short-chain dehydrogena 97.6 0.00011 3.8E-09 52.4 6.3 48 4-51 247-296 (347)
13 3m2p_A UDP-N-acetylglucosamine 97.6 0.00012 4.3E-09 51.7 6.5 46 5-50 201-247 (311)
14 3ko8_A NAD-dependent epimerase 97.6 0.00014 4.8E-09 51.1 6.0 46 5-50 205-255 (312)
15 3sxp_A ADP-L-glycero-D-mannohe 97.6 0.00014 4.9E-09 52.5 6.2 45 5-50 231-275 (362)
16 4egb_A DTDP-glucose 4,6-dehydr 97.5 0.00012 4.1E-09 52.3 5.4 46 5-50 242-288 (346)
17 4b8w_A GDP-L-fucose synthase; 97.5 9.6E-05 3.3E-09 51.2 4.2 46 5-50 218-266 (319)
18 1e6u_A GDP-fucose synthetase; 97.5 0.00018 6.2E-09 50.7 5.3 46 5-50 213-268 (321)
19 3gpi_A NAD-dependent epimerase 97.5 0.00019 6.6E-09 50.1 5.3 46 5-50 186-235 (286)
20 2hun_A 336AA long hypothetical 97.4 0.00019 6.6E-09 50.9 5.2 46 4-49 218-264 (336)
21 1r6d_A TDP-glucose-4,6-dehydra 97.4 0.00022 7.6E-09 50.7 5.5 46 4-49 218-264 (337)
22 2p5y_A UDP-glucose 4-epimerase 97.4 0.00023 7.9E-09 50.2 5.3 44 5-50 219-263 (311)
23 3vps_A TUNA, NAD-dependent epi 97.4 0.0004 1.4E-08 48.6 6.5 45 5-50 212-256 (321)
24 1udb_A Epimerase, UDP-galactos 97.4 0.00019 6.6E-09 51.0 4.9 46 5-50 235-284 (338)
25 2b69_A UDP-glucuronate decarbo 97.4 0.00058 2E-08 48.8 7.1 46 5-50 240-285 (343)
26 1oc2_A DTDP-glucose 4,6-dehydr 97.4 0.00031 1E-08 50.0 5.6 46 4-49 228-274 (348)
27 2v6g_A Progesterone 5-beta-red 97.3 0.00023 7.7E-09 50.9 4.7 46 5-50 227-274 (364)
28 1ek6_A UDP-galactose 4-epimera 97.3 0.00028 9.4E-09 50.3 5.0 46 5-50 243-292 (348)
29 3sc6_A DTDP-4-dehydrorhamnose 97.3 0.00044 1.5E-08 48.1 6.0 45 6-50 191-235 (287)
30 2jl1_A Triphenylmethane reduct 97.3 0.00079 2.7E-08 46.6 6.9 47 4-50 173-221 (287)
31 3ruf_A WBGU; rossmann fold, UD 97.3 0.00031 1.1E-08 50.2 4.7 44 5-48 247-293 (351)
32 1kew_A RMLB;, DTDP-D-glucose 4 97.2 0.00032 1.1E-08 50.2 4.6 46 4-49 234-280 (361)
33 2q1s_A Putative nucleotide sug 97.2 0.00025 8.6E-09 51.7 4.1 45 6-50 263-308 (377)
34 1orr_A CDP-tyvelose-2-epimeras 97.2 0.00057 2E-08 48.4 5.2 46 5-50 241-291 (347)
35 2x6t_A ADP-L-glycero-D-manno-h 97.2 0.00053 1.8E-08 49.3 5.0 45 4-49 259-304 (357)
36 1vl0_A DTDP-4-dehydrorhamnose 97.1 0.00089 3E-08 46.6 5.9 46 4-50 195-241 (292)
37 2zcu_A Uncharacterized oxidore 97.1 0.0015 5.2E-08 45.1 6.8 47 4-50 169-217 (286)
38 1eq2_A ADP-L-glycero-D-mannohe 97.1 0.00028 9.4E-09 49.3 2.9 44 5-49 213-257 (310)
39 2x4g_A Nucleoside-diphosphate- 97.1 0.00061 2.1E-08 48.2 4.7 46 4-50 217-263 (342)
40 1sb8_A WBPP; epimerase, 4-epim 97.1 0.00089 3E-08 48.0 5.4 47 4-50 248-300 (352)
41 1gy8_A UDP-galactose 4-epimera 97.1 0.00055 1.9E-08 49.7 4.3 46 5-50 274-329 (397)
42 2q1w_A Putative nucleotide sug 97.1 0.001 3.5E-08 47.6 5.6 46 3-49 221-267 (333)
43 3slg_A PBGP3 protein; structur 97.0 0.00069 2.4E-08 48.8 4.7 46 5-50 247-297 (372)
44 2pzm_A Putative nucleotide sug 97.0 0.00099 3.4E-08 47.6 5.4 46 3-49 218-265 (330)
45 2c20_A UDP-glucose 4-epimerase 97.0 0.00042 1.4E-08 49.0 3.4 46 5-50 226-275 (330)
46 2c5a_A GDP-mannose-3', 5'-epim 97.0 0.0014 4.9E-08 47.8 6.2 46 5-50 249-294 (379)
47 2bll_A Protein YFBG; decarboxy 96.9 0.0011 3.8E-08 46.8 4.9 45 5-49 224-273 (345)
48 2ydy_A Methionine adenosyltran 96.9 0.00067 2.3E-08 47.7 3.6 47 4-50 196-247 (315)
49 1i24_A Sulfolipid biosynthesis 96.9 0.0022 7.5E-08 46.5 6.2 45 5-50 277-328 (404)
50 1n2s_A DTDP-4-, DTDP-glucose o 96.8 0.00052 1.8E-08 47.9 2.4 44 6-49 189-237 (299)
51 3st7_A Capsular polysaccharide 96.8 0.0013 4.4E-08 47.7 4.2 45 5-49 172-219 (369)
52 3e48_A Putative nucleoside-dip 96.7 0.0031 1E-07 43.9 5.6 48 4-52 172-221 (289)
53 3oh8_A Nucleoside-diphosphate 96.7 0.0011 3.9E-08 50.9 3.4 46 5-50 341-387 (516)
54 2ggs_A 273AA long hypothetical 96.5 0.0027 9.3E-08 43.5 4.3 47 3-50 183-229 (273)
55 1rkx_A CDP-glucose-4,6-dehydra 96.5 0.0019 6.5E-08 46.2 3.5 48 5-52 234-289 (357)
56 2hrz_A AGR_C_4963P, nucleoside 96.2 0.0071 2.4E-07 42.9 4.9 45 4-49 236-285 (342)
57 1z45_A GAL10 bifunctional prot 96.1 0.0045 1.5E-07 48.9 4.0 46 5-50 250-303 (699)
58 2yy7_A L-threonine dehydrogena 96.0 0.0055 1.9E-07 42.7 3.5 42 5-47 215-261 (312)
59 4f6c_A AUSA reductase domain p 95.8 0.013 4.4E-07 43.3 5.1 42 5-47 301-343 (427)
60 1y1p_A ARII, aldehyde reductas 95.8 0.02 6.9E-07 40.1 5.9 46 4-49 247-293 (342)
61 2p4h_X Vestitone reductase; NA 95.6 0.022 7.6E-07 39.8 5.3 44 3-47 224-268 (322)
62 1z7e_A Protein aRNA; rossmann 95.5 0.012 4E-07 46.4 4.2 44 5-48 539-587 (660)
63 1xgk_A Nitrogen metabolite rep 95.4 0.037 1.3E-06 40.4 6.3 46 5-51 191-241 (352)
64 1xq6_A Unknown protein; struct 95.3 0.0049 1.7E-07 41.4 1.1 45 4-48 203-252 (253)
65 3ajr_A NDP-sugar epimerase; L- 95.3 0.015 5.1E-07 40.7 3.6 42 5-47 209-255 (317)
66 4f6l_B AUSA reductase domain p 95.3 0.02 6.8E-07 43.5 4.6 42 5-46 382-424 (508)
67 4dqv_A Probable peptide synthe 95.2 0.019 6.6E-07 43.6 4.3 45 5-50 330-382 (478)
68 2c29_D Dihydroflavonol 4-reduc 95.2 0.039 1.3E-06 39.0 5.5 43 3-46 228-271 (337)
69 2rh8_A Anthocyanidin reductase 94.9 0.035 1.2E-06 39.2 4.6 44 3-47 240-284 (338)
70 3i6i_A Putative leucoanthocyan 94.6 0.046 1.6E-06 39.0 4.7 47 5-51 197-246 (346)
71 3e8x_A Putative NAD-dependent 94.3 0.032 1.1E-06 37.7 3.1 38 4-42 195-234 (236)
72 3dqp_A Oxidoreductase YLBE; al 94.1 0.057 2E-06 36.0 4.0 37 4-41 172-210 (219)
73 3m1a_A Putative dehydrogenase; 94.0 0.029 9.8E-07 39.1 2.5 45 3-47 222-267 (281)
74 2wm3_A NMRA-like family domain 93.9 0.056 1.9E-06 37.6 3.9 46 5-51 190-238 (299)
75 2gn4_A FLAA1 protein, UDP-GLCN 93.8 0.047 1.6E-06 39.5 3.5 44 4-48 219-263 (344)
76 1qyd_A Pinoresinol-lariciresin 93.6 0.14 4.8E-06 35.6 5.4 48 4-51 195-245 (313)
77 3c1o_A Eugenol synthase; pheny 93.4 0.13 4.4E-06 36.0 5.0 48 4-51 190-240 (321)
78 2r6j_A Eugenol synthase 1; phe 92.9 0.15 5.2E-06 35.7 4.8 48 4-51 189-239 (318)
79 1qyc_A Phenylcoumaran benzylic 92.8 0.17 5.9E-06 35.0 4.9 47 5-51 191-240 (308)
80 2gas_A Isoflavone reductase; N 92.7 0.18 6.2E-06 34.9 4.9 48 4-51 189-239 (307)
81 1w6u_A 2,4-dienoyl-COA reducta 88.7 0.043 1.5E-06 38.4 -1.4 48 2-49 237-288 (302)
82 2dkn_A 3-alpha-hydroxysteroid 88.2 0.17 5.9E-06 33.8 1.3 35 3-37 214-252 (255)
83 2bgk_A Rhizome secoisolaricire 87.5 0.18 6.1E-06 34.6 1.1 42 3-44 230-275 (278)
84 1fmc_A 7 alpha-hydroxysteroid 85.4 0.42 1.4E-05 32.2 2.1 35 2-36 217-255 (255)
85 2a35_A Hypothetical protein PA 84.4 0.38 1.3E-05 31.4 1.5 32 5-36 181-212 (215)
86 3svt_A Short-chain type dehydr 83.1 0.52 1.8E-05 32.8 1.8 48 2-49 223-275 (281)
87 1spx_A Short-chain reductase f 80.9 0.86 2.9E-05 31.4 2.2 44 2-45 228-276 (278)
88 3dhn_A NAD-dependent epimerase 75.6 2.5 8.4E-05 27.8 3.2 31 5-35 193-225 (227)
89 1hdo_A Biliverdin IX beta redu 74.5 3.3 0.00011 26.4 3.5 29 3-31 175-205 (206)
90 3goe_A DNA repair protein RAD6 67.4 3.5 0.00012 25.4 2.3 54 16-84 13-66 (82)
91 2gdz_A NAD+-dependent 15-hydro 62.6 3.5 0.00012 28.1 1.8 36 3-38 221-258 (267)
92 3ew7_A LMO0794 protein; Q8Y8U8 61.4 6.4 0.00022 25.3 2.9 32 5-36 186-219 (221)
93 4e6p_A Probable sorbitol dehyd 61.3 4.3 0.00015 27.6 2.1 33 2-34 223-259 (259)
94 2id1_A Hypothetical protein; a 55.7 14 0.00047 24.2 3.7 40 22-62 33-77 (130)
95 3gaf_A 7-alpha-hydroxysteroid 55.2 9.2 0.00031 26.0 2.9 35 2-36 218-256 (256)
96 3h2s_A Putative NADH-flavin re 54.2 14 0.00046 23.9 3.5 31 4-34 187-219 (224)
97 2zat_A Dehydrogenase/reductase 53.4 4.6 0.00016 27.4 1.1 34 2-35 223-260 (260)
98 3d3w_A L-xylulose reductase; u 52.8 11 0.00039 24.8 3.0 31 3-33 209-243 (244)
99 3qiv_A Short-chain dehydrogena 52.6 4.7 0.00016 27.1 1.1 32 3-34 217-252 (253)
100 2o5a_A BH1328 protein; BHR21, 51.3 18 0.00062 23.4 3.7 49 23-72 34-88 (125)
101 3ups_A Iojap-like protein; PSI 50.4 17 0.0006 23.9 3.6 39 23-62 50-93 (136)
102 3ai3_A NADPH-sorbose reductase 49.9 14 0.00049 24.9 3.2 33 2-34 226-262 (263)
103 1ja9_A 4HNR, 1,3,6,8-tetrahydr 49.4 13 0.00046 24.8 3.0 29 3-31 241-273 (274)
104 3gk3_A Acetoacetyl-COA reducta 49.3 19 0.00066 24.4 3.8 33 2-34 233-269 (269)
105 3s55_A Putative short-chain de 47.9 9.2 0.00031 26.2 2.0 34 2-35 243-280 (281)
106 3qlj_A Short chain dehydrogena 47.7 9.4 0.00032 27.0 2.0 45 4-48 247-312 (322)
107 3uce_A Dehydrogenase; rossmann 45.8 19 0.00065 23.7 3.3 33 2-34 189-223 (223)
108 3ek2_A Enoyl-(acyl-carrier-pro 44.9 7.5 0.00026 26.1 1.1 38 3-40 227-268 (271)
109 2hq1_A Glucose/ribitol dehydro 44.9 21 0.00072 23.5 3.4 30 3-32 213-246 (247)
110 3qvo_A NMRA family protein; st 43.9 20 0.0007 23.7 3.2 31 3-33 194-227 (236)
111 3ay3_A NAD-dependent epimerase 43.8 5.1 0.00018 27.0 0.1 44 4-49 179-224 (267)
112 3un1_A Probable oxidoreductase 42.2 23 0.00077 24.2 3.3 33 2-34 224-258 (260)
113 4e3z_A Putative oxidoreductase 40.5 22 0.00077 24.1 3.0 29 3-31 240-272 (272)
114 2wyu_A Enoyl-[acyl carrier pro 40.5 23 0.00078 23.9 3.0 37 2-38 219-259 (261)
115 2d1y_A Hypothetical protein TT 39.0 26 0.0009 23.5 3.2 32 3-34 213-248 (256)
116 3osu_A 3-oxoacyl-[acyl-carrier 37.3 25 0.00086 23.5 2.8 31 2-32 211-245 (246)
117 4dmm_A 3-oxoacyl-[acyl-carrier 37.0 22 0.00076 24.4 2.6 33 2-34 232-269 (269)
118 3lyl_A 3-oxoacyl-(acyl-carrier 36.8 26 0.0009 23.2 2.8 32 2-33 211-246 (247)
119 3f9i_A 3-oxoacyl-[acyl-carrier 35.3 30 0.001 22.9 2.9 31 2-32 213-247 (249)
120 3mhy_A PII-like protein PZ; PI 34.3 51 0.0017 20.3 3.7 30 5-34 69-101 (112)
121 3ak4_A NADH-dependent quinucli 34.1 35 0.0012 22.9 3.2 30 3-32 228-261 (263)
122 3uxy_A Short-chain dehydrogena 34.0 31 0.0011 23.6 2.9 33 2-34 230-266 (266)
123 4eso_A Putative oxidoreductase 33.7 16 0.00056 24.8 1.4 37 2-38 215-254 (255)
124 3qgm_A P-nitrophenyl phosphata 32.6 42 0.0014 22.2 3.3 38 9-50 29-68 (268)
125 3ftp_A 3-oxoacyl-[acyl-carrier 32.4 33 0.0011 23.5 2.8 33 2-34 234-270 (270)
126 1vhx_A Putative holliday junct 31.8 1E+02 0.0036 19.9 5.1 43 8-50 42-93 (150)
127 1uay_A Type II 3-hydroxyacyl-C 31.8 48 0.0016 21.5 3.5 31 3-33 207-239 (242)
128 3pdw_A Uncharacterized hydrola 31.8 56 0.0019 21.6 3.9 39 9-50 27-66 (266)
129 1cyd_A Carbonyl reductase; sho 31.6 34 0.0011 22.4 2.7 30 3-32 209-242 (244)
130 3afn_B Carbonyl reductase; alp 31.5 8.2 0.00028 25.6 -0.4 30 3-32 222-256 (258)
131 1sby_A Alcohol dehydrogenase; 31.4 35 0.0012 22.7 2.8 30 4-33 212-242 (254)
132 1s2o_A SPP, sucrose-phosphatas 31.1 37 0.0013 22.7 2.9 24 11-34 22-46 (244)
133 3t4x_A Oxidoreductase, short c 30.5 37 0.0013 23.0 2.8 34 2-35 229-266 (267)
134 2ph3_A 3-oxoacyl-[acyl carrier 30.0 40 0.0014 22.0 2.8 29 3-31 210-242 (245)
135 2pnf_A 3-oxoacyl-[acyl-carrier 29.8 59 0.002 21.2 3.7 29 3-31 215-247 (248)
136 3ncq_A Nitrogen regulatory pro 29.7 64 0.0022 20.3 3.7 31 5-35 69-102 (119)
137 4ar0_A Type IV pilus biogenesi 29.2 67 0.0023 20.4 3.7 18 34-51 42-59 (128)
138 3l7p_A Putative nitrogen regul 28.8 59 0.002 20.3 3.4 32 5-36 72-106 (115)
139 3n74_A 3-ketoacyl-(acyl-carrie 28.7 38 0.0013 22.6 2.6 34 3-36 222-259 (261)
140 3t9z_A GLNK3, nitrogen regulat 28.7 70 0.0024 20.1 3.7 31 5-35 69-102 (118)
141 3awd_A GOX2181, putative polyo 27.8 70 0.0024 21.0 3.8 30 3-32 225-258 (260)
142 1iv0_A Hypothetical protein; r 27.1 1.1E+02 0.0037 18.5 4.6 46 5-51 35-89 (98)
143 2bka_A CC3, TAT-interacting pr 27.1 30 0.001 22.6 1.8 24 4-27 201-225 (242)
144 4aff_A Nitrogen regulatory pro 26.7 65 0.0022 20.1 3.3 29 5-33 69-100 (116)
145 2q2v_A Beta-D-hydroxybutyrate 26.2 52 0.0018 21.9 2.9 30 3-32 220-253 (255)
146 3oid_A Enoyl-[acyl-carrier-pro 26.0 71 0.0024 21.5 3.6 33 2-34 213-249 (258)
147 3gem_A Short chain dehydrogena 25.9 46 0.0016 22.6 2.7 33 2-34 224-258 (260)
148 2pd6_A Estradiol 17-beta-dehyd 25.7 89 0.003 20.5 4.0 33 3-35 223-259 (264)
149 4dqx_A Probable oxidoreductase 25.6 50 0.0017 22.7 2.8 34 2-35 236-273 (277)
150 3e9n_A Putative short-chain de 24.3 65 0.0022 21.3 3.1 25 3-27 200-225 (245)
151 1qsg_A Enoyl-[acyl-carrier-pro 24.1 52 0.0018 22.1 2.6 32 3-34 222-257 (265)
152 1hwu_A PII protein; herbaspiri 23.9 97 0.0033 18.7 3.7 29 5-33 69-100 (112)
153 3m0z_A Putative aldolase; MCSG 23.8 98 0.0033 22.5 4.1 33 20-52 124-164 (249)
154 3ppi_A 3-hydroxyacyl-COA dehyd 23.2 81 0.0028 21.3 3.5 32 3-34 246-279 (281)
155 2qip_A Protein of unknown func 23.1 1.2E+02 0.004 19.5 4.1 40 7-50 97-136 (165)
156 3uf0_A Short-chain dehydrogena 22.8 54 0.0019 22.4 2.5 33 2-34 237-273 (273)
157 2obb_A Hypothetical protein; s 22.4 1E+02 0.0035 19.8 3.7 39 9-51 29-69 (142)
158 3tpc_A Short chain alcohol deh 22.0 93 0.0032 20.7 3.6 34 2-35 221-256 (257)
159 1nu0_A Hypothetical protein YQ 21.7 1.1E+02 0.0038 19.6 3.8 45 10-54 42-95 (138)
160 3i4f_A 3-oxoacyl-[acyl-carrier 21.6 63 0.0021 21.5 2.6 33 3-35 219-255 (264)
161 3vtz_A Glucose 1-dehydrogenase 21.6 61 0.0021 22.1 2.6 33 2-34 220-256 (269)
162 1e9r_A Conjugal transfer prote 21.3 36 0.0012 24.9 1.4 21 25-45 57-80 (437)
163 2d48_A Interleukin-4; four hel 21.2 1.8E+02 0.0063 19.0 4.8 39 5-46 82-120 (129)
164 1vfj_A Nitrogen regulatory pro 20.9 1.2E+02 0.0041 18.4 3.7 20 5-24 69-88 (116)
165 3gvc_A Oxidoreductase, probabl 20.7 59 0.002 22.3 2.4 33 2-34 239-275 (277)
166 3tox_A Short chain dehydrogena 20.6 80 0.0027 21.7 3.0 33 2-34 220-256 (280)
167 2rhc_B Actinorhodin polyketide 20.5 94 0.0032 21.1 3.4 29 3-31 242-274 (277)
168 1ybx_A Conserved hypothetical 20.4 37 0.0013 22.5 1.2 20 64-83 83-103 (143)
169 3ezl_A Acetoacetyl-COA reducta 20.2 97 0.0033 20.4 3.3 32 2-33 220-255 (256)
170 4e4y_A Short chain dehydrogena 20.1 73 0.0025 21.0 2.7 30 3-32 209-242 (244)
No 1
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=98.19 E-value=2.5e-06 Score=63.97 Aligned_cols=80 Identities=11% Similarity=0.069 Sum_probs=60.6
Q ss_pred ccHHHHHHHHHHHhcCCCCCc-EEEecCce---eeHHHHHHHHHHHhCC------------------------ceEeecC
Q psy15783 4 LNLNLSKYAMWMMLQQDTPQD-FVIATGET---HSVREFVEAAFLYIGK------------------------TIVWEGT 55 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~pgd-YnI~SG~~---~SV~d~l~~~~~~~g~------------------------~i~w~g~ 55 (86)
..+.+++++++++++++.+|+ |++..|.+ +|++|+++.+++.+|. ++.|.|-
T Consensus 235 v~v~D~a~~~~~a~~~~~~g~i~~l~~g~~~~~~s~~ela~~l~~~~G~~~~~~~~~~~~~~~~~~i~~~g~~~i~~~g~ 314 (399)
T 3nzo_A 235 VTPQESGELCLMSCIFGENRDIFFPKLSEALHLISFADIAVKYLKQLGYEPHLCESEDEARELAKTLPAQGKWPCLFTSS 314 (399)
T ss_dssp ECHHHHHHHHHHHHHHCCTTEEEEECCCTTCCCEEHHHHHHHHHHHTTCEEEECSCHHHHHHHHHHTTTTTEEEEEEECC
T ss_pred CCHHHHHHHHHHHhccCCCCCEEEecCCCCCCcccHHHHHHHHHHHhCCCcccccchhhhhhhhhccccCCceeEEEecC
Confidence 357789999999999888898 99988888 9999999999999994 4444443
Q ss_pred -ccccc-----------ceeccCCcEEEEEcCCCcCCCCC
Q psy15783 56 -GKDEV-----------GKEKDTGIVRVKVNENYFRPTEV 83 (86)
Q Consensus 56 -~~~e~-----------~~~~~~~~~~v~iDp~~~RP~dv 83 (86)
.+.|+ ...+..+++.|..++.++||.++
T Consensus 315 ~~pgek~~eel~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 354 (399)
T 3nzo_A 315 DTTGEKDFEEFFTDKETLDMARFDNLGIIKNDSLYQQELL 354 (399)
T ss_dssp ---------CCSCTTSCEECSSCSSEEEEECCCCCCHHHH
T ss_pred CCCCchhhHHhccCCcccCcccCCceeEEecCCCCCHHHH
Confidence 12222 22356678888889999998664
No 2
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=98.04 E-value=4.4e-05 Score=54.00 Aligned_cols=51 Identities=51% Similarity=0.699 Sum_probs=44.5
Q ss_pred cccHHHHHHHHHHHhcCCCCCcEEEecCceeeHHHHHHHHHHHhCCceEee
Q psy15783 3 ILNLNLSKYAMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWE 53 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~~pgdYnI~SG~~~SV~d~l~~~~~~~g~~i~w~ 53 (86)
...++++++|+..+++++.++.|||++|+..|++||++.+.+.+|.++.|.
T Consensus 221 ~~~v~Dva~a~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~ 271 (345)
T 2z1m_A 221 WGYAPEYVEAMWLMMQQPEPDDYVIATGETHTVREFVEKAAKIAGFDIEWV 271 (345)
T ss_dssp CEEHHHHHHHHHHHHTSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEE
T ss_pred eEEHHHHHHHHHHHHhCCCCceEEEeCCCCccHHHHHHHHHHHhCCCcccc
Confidence 456889999999999887665699999999999999999999999986553
No 3
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=98.01 E-value=4.4e-05 Score=55.39 Aligned_cols=49 Identities=69% Similarity=1.080 Sum_probs=43.1
Q ss_pred cHHHHHHHHHHHhcCCCCCcEEEecCceeeHHHHHHHHHHHhCCceEee
Q psy15783 5 NLNLSKYAMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWE 53 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgdYnI~SG~~~SV~d~l~~~~~~~g~~i~w~ 53 (86)
.++++++|+..+++++.++.|||++|+..|++|+++.+.+.+|.++.|.
T Consensus 252 ~v~Dva~a~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~ 300 (375)
T 1t2a_A 252 HAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWE 300 (375)
T ss_dssp EHHHHHHHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEE
T ss_pred EHHHHHHHHHHHHhcCCCceEEEeCCCcccHHHHHHHHHHHhCCCcccc
Confidence 4788999999999887765699999999999999999999999886543
No 4
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=97.98 E-value=1.7e-05 Score=56.01 Aligned_cols=47 Identities=13% Similarity=0.293 Sum_probs=42.4
Q ss_pred ccHHHHHHHHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 4 LNLNLSKYAMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
..+.++++|++.+++++.+|. |||++|...|++|+++.+.+.+|.+.
T Consensus 224 v~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 271 (321)
T 2pk3_A 224 TDVRDIVQAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKI 271 (321)
T ss_dssp EEHHHHHHHHHHHHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSSSCC
T ss_pred EEHHHHHHHHHHHHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCCCC
Confidence 468899999999998777777 99999999999999999999999865
No 5
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=97.80 E-value=4.5e-05 Score=55.44 Aligned_cols=46 Identities=43% Similarity=0.716 Sum_probs=41.0
Q ss_pred ccHHHHHHHHHHHhcCCCCCcEEEecCceeeHHHHHHHHHHHhCCc
Q psy15783 4 LNLNLSKYAMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKT 49 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~pgdYnI~SG~~~SV~d~l~~~~~~~g~~ 49 (86)
..++++++|+..+++++.++.|||++|+.+|++||++.+.+.+|.+
T Consensus 256 v~v~Dva~a~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~ 301 (381)
T 1n7h_A 256 GFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLN 301 (381)
T ss_dssp EEHHHHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCC
T ss_pred EEHHHHHHHHHHHHhCCCCCeEEeeCCCCCcHHHHHHHHHHHcCCC
Confidence 4588999999999988765559999999999999999999999975
No 6
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=97.79 E-value=4.5e-05 Score=53.92 Aligned_cols=46 Identities=20% Similarity=0.204 Sum_probs=41.8
Q ss_pred cHHHHHHHHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
.++++++|+..+++...++. |||++|+..|++||++.+.+.+|.+.
T Consensus 206 ~v~Dva~a~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~ 252 (313)
T 3ehe_A 206 YISDCVDAMLFGLRGDERVNIFNIGSEDQIKVKRIAEIVCEELGLSP 252 (313)
T ss_dssp EHHHHHHHHHHHTTCCSSEEEEECCCSCCEEHHHHHHHHHHHTTCCC
T ss_pred EHHHHHHHHHHHhccCCCCceEEECCCCCeeHHHHHHHHHHHhCCCC
Confidence 47889999999999666777 99999999999999999999999865
No 7
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=97.78 E-value=4.5e-05 Score=54.13 Aligned_cols=45 Identities=42% Similarity=0.623 Sum_probs=40.3
Q ss_pred cHHHHHHHHHHHhcCCCCCcEEEecCceeeHHHHHHHHHHHhCCc
Q psy15783 5 NLNLSKYAMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKT 49 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgdYnI~SG~~~SV~d~l~~~~~~~g~~ 49 (86)
.++++++|+..+++++.++-|||++|+..|++||++.+.+.+|.+
T Consensus 234 ~v~Dva~a~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 278 (335)
T 1rpn_A 234 FAGDYVEAMWLMLQQDKADDYVVATGVTTTVRDMCQIAFEHVGLD 278 (335)
T ss_dssp EHHHHHHHHHHHHHSSSCCCEEECCSCEEEHHHHHHHHHHTTTCC
T ss_pred EHHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHHHHHhCCC
Confidence 468899999999988766559999999999999999999999875
No 8
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=97.77 E-value=3.6e-05 Score=54.78 Aligned_cols=46 Identities=20% Similarity=0.080 Sum_probs=40.8
Q ss_pred cHHHHHHHHHHHhcC---CCCCc-EEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQ---DTPQD-FVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~---~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
.++++++|++.++++ ...+. |||++|+.+|++|+++.+.+.+|.++
T Consensus 239 ~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~ 288 (341)
T 3enk_A 239 HVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAV 288 (341)
T ss_dssp EHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCC
T ss_pred EHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCc
Confidence 478999999999976 35677 99999999999999999999999875
No 9
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=97.75 E-value=6.8e-05 Score=53.95 Aligned_cols=49 Identities=47% Similarity=0.667 Sum_probs=42.6
Q ss_pred cHHHHHHHHHHHhcCCCCCcEEEecCceeeHHHHHHHHHHHhCCceEee
Q psy15783 5 NLNLSKYAMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWE 53 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgdYnI~SG~~~SV~d~l~~~~~~~g~~i~w~ 53 (86)
.++++++|+..+++++.++.|||++|+.+|++||++.+.+.+|.++.|.
T Consensus 228 ~v~Dva~a~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~ 276 (372)
T 1db3_A 228 HAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFE 276 (372)
T ss_dssp EHHHHHHHHHHTTSSSSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEE
T ss_pred EHHHHHHHHHHHHhcCCCceEEEcCCCceeHHHHHHHHHHHhCCCcccc
Confidence 4788999999999877654599999999999999999999999876543
No 10
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.73 E-value=5.3e-05 Score=52.75 Aligned_cols=46 Identities=9% Similarity=0.131 Sum_probs=42.5
Q ss_pred cHHHHHHHHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
.++++++|+..+++++.+|. |||++|+.+|++||++.+.+.+|.+.
T Consensus 184 ~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 230 (286)
T 3ius_A 184 HVEDIAQVLAASMARPDPGAVYNVCDDEPVPPQDVIAYAAELQGLPL 230 (286)
T ss_dssp EHHHHHHHHHHHHHSCCTTCEEEECCSCCBCHHHHHHHHHHHHTCCC
T ss_pred EHHHHHHHHHHHHhCCCCCCEEEEeCCCCccHHHHHHHHHHHcCCCC
Confidence 46889999999999988887 99999999999999999999999864
No 11
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=97.70 E-value=5.4e-05 Score=53.38 Aligned_cols=45 Identities=9% Similarity=0.042 Sum_probs=41.0
Q ss_pred cHHHHHHHHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHhCCc
Q psy15783 5 NLNLSKYAMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYIGKT 49 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~ 49 (86)
.++++|+|+..+++++.++. ||++++++.|.+||++.+.+.+|.+
T Consensus 194 hv~Dva~a~~~~~~~~~~~g~yn~~~~~~~t~~e~~~~ia~~lgrp 239 (298)
T 4b4o_A 194 HIGDLAGILTHALEANHVHGVLNGVAPSSATNAEFAQTFGAALGRR 239 (298)
T ss_dssp EHHHHHHHHHHHHHCTTCCEEEEESCSCCCBHHHHHHHHHHHHTCC
T ss_pred cHHHHHHHHHHHHhCCCCCCeEEEECCCccCHHHHHHHHHHHhCcC
Confidence 47899999999999887666 9999999999999999999999875
No 12
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=97.64 E-value=0.00011 Score=52.42 Aligned_cols=48 Identities=13% Similarity=0.155 Sum_probs=43.4
Q ss_pred ccHHHHHHHHHHHhcCC-CCCc-EEEecCceeeHHHHHHHHHHHhCCceE
Q psy15783 4 LNLNLSKYAMWMMLQQD-TPQD-FVIATGETHSVREFVEAAFLYIGKTIV 51 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~-~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~i~ 51 (86)
-.++++++|++.+++++ ..+. |||++|+..|++|+++.+.+.+|.++.
T Consensus 247 i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~ 296 (347)
T 4id9_A 247 TDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIV 296 (347)
T ss_dssp EEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEE
T ss_pred EeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCc
Confidence 56899999999999887 5677 999999999999999999999999763
No 13
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=97.64 E-value=0.00012 Score=51.68 Aligned_cols=46 Identities=15% Similarity=0.143 Sum_probs=41.8
Q ss_pred cHHHHHHHHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
.++++++|+..+++++..+. |||++|+..|++|+++.+.+.+|.+.
T Consensus 201 ~v~Dva~a~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 247 (311)
T 3m2p_A 201 YAKDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGNKD 247 (311)
T ss_dssp EHHHHHHHHHHHTTCTTCCEEEEECCSCEECHHHHHHHHHHHTTCTT
T ss_pred EHHHHHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhCCCC
Confidence 47789999999999887777 99999999999999999999999865
No 14
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=97.58 E-value=0.00014 Score=51.07 Aligned_cols=46 Identities=11% Similarity=0.058 Sum_probs=41.1
Q ss_pred cHHHHHHHHHHHhcC----CCCCc-EEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQ----DTPQD-FVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~----~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
.++++++|+..++++ ..++. |||++|+..|++|+++.+.+.+|.+.
T Consensus 205 ~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~ 255 (312)
T 3ko8_A 205 YVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRP 255 (312)
T ss_dssp EHHHHHHHHHHHHHHHHHSCCSEEEEEESCSSCEEHHHHHHHHHHHHTCCC
T ss_pred EHHHHHHHHHHHHHhccccCCCCcEEEEcCCCceeHHHHHHHHHHHhCCCC
Confidence 388999999999987 45677 99999999999999999999999865
No 15
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=97.58 E-value=0.00014 Score=52.49 Aligned_cols=45 Identities=11% Similarity=0.063 Sum_probs=41.5
Q ss_pred cHHHHHHHHHHHhcCCCCCcEEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgdYnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
.++++++|++.+++++.+|-|||++|+..|++||++.+.+.+| +.
T Consensus 231 ~v~Dva~ai~~~~~~~~~g~~~i~~~~~~s~~e~~~~i~~~~g-~~ 275 (362)
T 3sxp_A 231 YIEDVIQANVKAMKAQKSGVYNVGYSQARSYNEIVSILKEHLG-DF 275 (362)
T ss_dssp EHHHHHHHHHHHTTCSSCEEEEESCSCEEEHHHHHHHHHHHHC-CC
T ss_pred EHHHHHHHHHHHHhcCCCCEEEeCCCCCccHHHHHHHHHHHcC-CC
Confidence 3899999999999988777799999999999999999999999 65
No 16
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=97.55 E-value=0.00012 Score=52.28 Aligned_cols=46 Identities=20% Similarity=0.232 Sum_probs=42.2
Q ss_pred cHHHHHHHHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
.++++++|++.+++++.+|. |||++|+..|++|+++.+.+.+|.+.
T Consensus 242 ~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 288 (346)
T 4egb_A 242 HVTDHCSAIDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTK 288 (346)
T ss_dssp EHHHHHHHHHHHHHHCCTTCEEEECCSCCEEHHHHHHHHHHHHTCCG
T ss_pred EHHHHHHHHHHHHhcCCCCCEEEECCCCceeHHHHHHHHHHHhCCCc
Confidence 37899999999998888888 99999999999999999999999863
No 17
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=97.50 E-value=9.6e-05 Score=51.19 Aligned_cols=46 Identities=11% Similarity=-0.039 Sum_probs=40.3
Q ss_pred cHHHHHHHHHHHhcCCC--CCc-EEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQDT--PQD-FVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~--pgd-YnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
.++++++|+..++++.. .+. |||++|+.+|++|+++.+.+.+|.+.
T Consensus 218 ~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~ 266 (319)
T 4b8w_A 218 YSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHG 266 (319)
T ss_dssp EHHHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCS
T ss_pred eHHHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCC
Confidence 58899999999997643 355 99999999999999999999999865
No 18
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=97.46 E-value=0.00018 Score=50.69 Aligned_cols=46 Identities=13% Similarity=0.146 Sum_probs=40.9
Q ss_pred cHHHHHHHHHHHhcCCCC---------Cc-EEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQDTP---------QD-FVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~p---------gd-YnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
.++++++|+..++++..+ +. |||++|+..|++|+++.+.+.+|.+.
T Consensus 213 ~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~ 268 (321)
T 1e6u_A 213 HVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKG 268 (321)
T ss_dssp EHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCS
T ss_pred EHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCC
Confidence 578899999999987654 46 99999999999999999999999865
No 19
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=97.45 E-value=0.00019 Score=50.13 Aligned_cols=46 Identities=11% Similarity=0.177 Sum_probs=41.5
Q ss_pred cHHHHHHHHHHHhcC---CCCCc-EEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQ---DTPQD-FVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~---~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
.+.++++|+..++++ ...+. ||+++|+..|++|+++.+.+.+|.+.
T Consensus 186 ~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~ 235 (286)
T 3gpi_A 186 HRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGIAY 235 (286)
T ss_dssp EHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEEHHHHHHHHHHHTTCCC
T ss_pred EHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCCHHHHHHHHHHHcCCCC
Confidence 478899999999987 56777 99999999999999999999999875
No 20
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=97.44 E-value=0.00019 Score=50.87 Aligned_cols=46 Identities=22% Similarity=0.329 Sum_probs=41.6
Q ss_pred ccHHHHHHHHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHhCCc
Q psy15783 4 LNLNLSKYAMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYIGKT 49 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~ 49 (86)
..++++++|+..+++++..|. |||++|...|++||++.+.+.+|.+
T Consensus 218 i~v~Dva~~~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~ 264 (336)
T 2hun_A 218 LYVEDHVRAIELVLLKGESREIYNISAGEEKTNLEVVKIILRLMGKG 264 (336)
T ss_dssp EEHHHHHHHHHHHHHHCCTTCEEEECCSCEECHHHHHHHHHHHTTCC
T ss_pred EEHHHHHHHHHHHHhCCCCCCEEEeCCCCcccHHHHHHHHHHHhCCC
Confidence 357889999999998777888 9999999999999999999999875
No 21
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=97.43 E-value=0.00022 Score=50.67 Aligned_cols=46 Identities=13% Similarity=0.174 Sum_probs=41.6
Q ss_pred ccHHHHHHHHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHhCCc
Q psy15783 4 LNLNLSKYAMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYIGKT 49 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~ 49 (86)
..++++++|+..+++++.+|. |||++|...|++|+++.+.+.+|.+
T Consensus 218 i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~ 264 (337)
T 1r6d_A 218 VHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGAD 264 (337)
T ss_dssp EEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCC
T ss_pred EeHHHHHHHHHHHHhCCCCCCEEEeCCCCCccHHHHHHHHHHHhCCC
Confidence 357899999999998777887 9999999999999999999999885
No 22
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=97.41 E-value=0.00023 Score=50.16 Aligned_cols=44 Identities=25% Similarity=0.212 Sum_probs=39.4
Q ss_pred cHHHHHHHHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
.+.++++|+..+++++ |. |||++|+..|++|+++.+.+.+|.++
T Consensus 219 ~v~Dva~a~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 263 (311)
T 2p5y_A 219 YVGDVAEAHALALFSL--EGIYNVGTGEGHTTREVLMAVAEAAGKAP 263 (311)
T ss_dssp EHHHHHHHHHHHHHHC--CEEEEESCSCCEEHHHHHHHHHHHHTCCC
T ss_pred EHHHHHHHHHHHHhCC--CCEEEeCCCCCccHHHHHHHHHHHhCCCC
Confidence 4789999999999764 67 99999999999999999999998865
No 23
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=97.41 E-value=0.0004 Score=48.56 Aligned_cols=45 Identities=9% Similarity=0.087 Sum_probs=41.6
Q ss_pred cHHHHHHHHHHHhcCCCCCcEEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgdYnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
.+++++++++.+++++.+|.|||++|+.+|++|+++.+. .+|.+.
T Consensus 212 ~v~Dva~~~~~~~~~~~~g~~~i~~~~~~s~~e~~~~i~-~~g~~~ 256 (321)
T 3vps_A 212 YITDVVDKLVALANRPLPSVVNFGSGQSLSVNDVIRILQ-ATSPAA 256 (321)
T ss_dssp EHHHHHHHHHHGGGSCCCSEEEESCSCCEEHHHHHHHHH-TTCTTC
T ss_pred EHHHHHHHHHHHHhcCCCCeEEecCCCcccHHHHHHHHH-HhCCCC
Confidence 578899999999998888789999999999999999999 999876
No 24
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=97.40 E-value=0.00019 Score=51.00 Aligned_cols=46 Identities=17% Similarity=0.184 Sum_probs=39.6
Q ss_pred cHHHHHHHHHHHhcCC--CCC-c-EEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQD--TPQ-D-FVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~--~pg-d-YnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
.+.++++|+++++++. .++ . |||++|+.+|++|+++.+.+.+|.++
T Consensus 235 ~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~ 284 (338)
T 1udb_A 235 HVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPV 284 (338)
T ss_dssp EHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCC
T ss_pred EHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCC
Confidence 5789999999998752 454 6 99999999999999999999998765
No 25
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=97.38 E-value=0.00058 Score=48.84 Aligned_cols=46 Identities=11% Similarity=0.174 Sum_probs=40.3
Q ss_pred cHHHHHHHHHHHhcCCCCCcEEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgdYnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
.++++++|+..+++++..+.|||++|+..|++||++.+.+.+|.+.
T Consensus 240 ~v~Dva~a~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 285 (343)
T 2b69_A 240 YVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGS 285 (343)
T ss_dssp EHHHHHHHHHHHHTSSCCSCEEESCCCEEEHHHHHHHHHHHHTCCC
T ss_pred eHHHHHHHHHHHHhcCCCCeEEecCCCCCcHHHHHHHHHHHhCCCC
Confidence 5788999999999876544499999999999999999999999764
No 26
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=97.36 E-value=0.00031 Score=50.05 Aligned_cols=46 Identities=15% Similarity=0.374 Sum_probs=41.4
Q ss_pred ccHHHHHHHHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHhCCc
Q psy15783 4 LNLNLSKYAMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYIGKT 49 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~ 49 (86)
..+++++++++.+++++.+|. |||++|...|++|+++.+.+.+|.+
T Consensus 228 i~v~Dva~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~ 274 (348)
T 1oc2_A 228 IHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQP 274 (348)
T ss_dssp EEHHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCC
T ss_pred EEHHHHHHHHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCC
Confidence 357889999999998777787 9999999999999999999999875
No 27
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=97.35 E-value=0.00023 Score=50.92 Aligned_cols=46 Identities=11% Similarity=0.124 Sum_probs=40.8
Q ss_pred cHHHHHHHHHHHhcCCC-CCc-EEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQDT-PQD-FVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~-pgd-YnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
+++++++|+..+++++. .|+ |||++++..|++|+++.+.+.+|.+.
T Consensus 227 ~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~ 274 (364)
T 2v6g_A 227 DADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVEC 274 (364)
T ss_dssp EHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCB
T ss_pred cHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCC
Confidence 46789999999998764 687 99999999999999999999999764
No 28
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=97.34 E-value=0.00028 Score=50.28 Aligned_cols=46 Identities=22% Similarity=0.119 Sum_probs=40.2
Q ss_pred cHHHHHHHHHHHhcCC--CCC-c-EEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQD--TPQ-D-FVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~--~pg-d-YnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
.++++++|+..++++. .+| . |||++|+..|++|+++.+.+.+|.++
T Consensus 243 ~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~ 292 (348)
T 1ek6_A 243 HVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKI 292 (348)
T ss_dssp EHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCC
T ss_pred EHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCC
Confidence 4789999999999764 466 6 99999999999999999999999765
No 29
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=97.34 E-value=0.00044 Score=48.05 Aligned_cols=45 Identities=11% Similarity=0.158 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHhcCCCCCcEEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 6 LNLSKYAMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 6 ~~~~v~a~~~ll~~~~pgdYnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
++++++|+..+++++..|-||+++|+..|++||++.+.+.+|.+.
T Consensus 191 v~Dva~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 235 (287)
T 3sc6_A 191 VADLNVMINKLIHTSLYGTYHVSNTGSCSWFEFAKKIFSYANMKV 235 (287)
T ss_dssp HHHHHHHHHHHHTSCCCEEEECCCBSCEEHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHhCCCCCeEEEcCCCcccHHHHHHHHHHHcCCCc
Confidence 889999999999887744499999999999999999999999865
No 30
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=97.30 E-value=0.00079 Score=46.63 Aligned_cols=47 Identities=13% Similarity=0.189 Sum_probs=41.9
Q ss_pred ccHHHHHHHHHHHhcCC-CCCc-EEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 4 LNLNLSKYAMWMMLQQD-TPQD-FVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~-~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
..++++++++..+++++ ..|. |||++|+..|++|+++.+.+.+|.++
T Consensus 173 i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 221 (287)
T 2jl1_A 173 VTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKKV 221 (287)
T ss_dssp BCHHHHHHHHHHHHTSSSCTTEEEEECCSSCBCHHHHHHHHHHHHSSCC
T ss_pred cCHHHHHHHHHHHhcCCCCCCcEEEecCCCcCCHHHHHHHHHHHHCCcc
Confidence 46889999999999875 4677 99999999999999999999999876
No 31
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=97.27 E-value=0.00031 Score=50.17 Aligned_cols=44 Identities=7% Similarity=0.110 Sum_probs=39.3
Q ss_pred cHHHHHHHHHHHhcC--CCCCc-EEEecCceeeHHHHHHHHHHHhCC
Q psy15783 5 NLNLSKYAMWMMLQQ--DTPQD-FVIATGETHSVREFVEAAFLYIGK 48 (86)
Q Consensus 5 n~~~~v~a~~~ll~~--~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~ 48 (86)
.++++++|++.++++ ...+. |||++|+.+|++||++.+.+.+|.
T Consensus 247 ~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~ 293 (351)
T 3ruf_A 247 YIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNL 293 (351)
T ss_dssp EHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHT
T ss_pred EHHHHHHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCc
Confidence 378999999999987 34677 999999999999999999999987
No 32
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=97.25 E-value=0.00032 Score=50.19 Aligned_cols=46 Identities=11% Similarity=0.130 Sum_probs=41.1
Q ss_pred ccHHHHHHHHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHhCCc
Q psy15783 4 LNLNLSKYAMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYIGKT 49 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~ 49 (86)
..+.++++|+..+++++..|. |||++|...|++|+++.+.+.+|.+
T Consensus 234 i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~ 280 (361)
T 1kew_A 234 LYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEI 280 (361)
T ss_dssp EEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHH
T ss_pred EEHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCc
Confidence 358899999999998777887 9999999999999999999988764
No 33
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=97.25 E-value=0.00025 Score=51.69 Aligned_cols=45 Identities=11% Similarity=0.102 Sum_probs=40.5
Q ss_pred HHHHHHH-HHHHhcCCCCCcEEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 6 LNLSKYA-MWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 6 ~~~~v~a-~~~ll~~~~pgdYnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
++++++| +..+++++.+|.|||++|+..|++||++.+.+.+|.+.
T Consensus 263 v~Dva~a~i~~~~~~~~~g~~~i~~~~~~s~~e~~~~i~~~~g~~~ 308 (377)
T 2q1s_A 263 VEDVANGLIACAADGTPGGVYNIASGKETSIADLATKINEITGNNT 308 (377)
T ss_dssp HHHHHHHHHHHHHHCCTTEEEECCCCCCEEHHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHHHhcCCCCeEEecCCCceeHHHHHHHHHHHhCCCC
Confidence 8899999 99999876655799999999999999999999998864
No 34
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=97.18 E-value=0.00057 Score=48.37 Aligned_cols=46 Identities=13% Similarity=0.053 Sum_probs=39.9
Q ss_pred cHHHHHHHHHHHhcC--CCCCc-EEEecCc--eeeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQ--DTPQD-FVIATGE--THSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~--~~pgd-YnI~SG~--~~SV~d~l~~~~~~~g~~i 50 (86)
.+.++++|+..++++ ...|. |||++|. ..|++||++.+.+.+|.++
T Consensus 241 ~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~ 291 (347)
T 1orr_A 241 HAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDM 291 (347)
T ss_dssp EHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCC
T ss_pred EHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCC
Confidence 588999999999975 24687 9999997 5999999999999999865
No 35
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=97.16 E-value=0.00053 Score=49.31 Aligned_cols=45 Identities=18% Similarity=0.259 Sum_probs=40.7
Q ss_pred ccHHHHHHHHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHhCCc
Q psy15783 4 LNLNLSKYAMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYIGKT 49 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~ 49 (86)
..++++++|++.+++++. +. |||++|+..|++||++.+.+.+|.+
T Consensus 259 i~v~Dva~ai~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~ 304 (357)
T 2x6t_A 259 VYVGDVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKG 304 (357)
T ss_dssp EEHHHHHHHHHHHHHHCC-CEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred EEHHHHHHHHHHHHhcCC-CCeEEecCCCcccHHHHHHHHHHHcCCC
Confidence 467899999999998766 77 9999999999999999999999986
No 36
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=97.15 E-value=0.00089 Score=46.61 Aligned_cols=46 Identities=11% Similarity=0.070 Sum_probs=41.0
Q ss_pred ccHHHHHHHHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 4 LNLNLSKYAMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
..++++++++..+++++ .+. |||++|+..|++||++.+.+.+|.+.
T Consensus 195 i~v~Dva~~~~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 241 (292)
T 1vl0_A 195 TSTVDLARVVLKVIDEK-NYGTFHCTCKGICSWYDFAVEIFRLTGIDV 241 (292)
T ss_dssp EEHHHHHHHHHHHHHHT-CCEEEECCCBSCEEHHHHHHHHHHHHCCCC
T ss_pred ccHHHHHHHHHHHHhcC-CCcEEEecCCCCccHHHHHHHHHHHhCCCC
Confidence 35889999999999876 666 99999999999999999999999864
No 37
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=97.12 E-value=0.0015 Score=45.07 Aligned_cols=47 Identities=9% Similarity=0.056 Sum_probs=41.5
Q ss_pred ccHHHHHHHHHHHhcCC-CCCc-EEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 4 LNLNLSKYAMWMMLQQD-TPQD-FVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~-~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
..++++++++..+++++ ..|. |||++++..|++|+++.+.+.+|.++
T Consensus 169 i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 217 (286)
T 2zcu_A 169 ATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQV 217 (286)
T ss_dssp BCHHHHHHHHHHHHHSSSCTTCEEEECCSSCBCHHHHHHHHHHHHSSCC
T ss_pred ccHHHHHHHHHHHhcCCCCCCceEEEeCCCcCCHHHHHHHHHHHHCCCC
Confidence 46789999999999774 4677 99999999999999999999999876
No 38
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=97.10 E-value=0.00028 Score=49.27 Aligned_cols=44 Identities=18% Similarity=0.251 Sum_probs=33.7
Q ss_pred cHHHHHHHHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHhCCc
Q psy15783 5 NLNLSKYAMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYIGKT 49 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~ 49 (86)
.++++++|+..+++++. +. ||+++|+..|++|+++.+.+.+|.+
T Consensus 213 ~v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~ 257 (310)
T 1eq2_A 213 YVGDVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKG 257 (310)
T ss_dssp EHHHHHHHHHHHHHHCC-CEEEEESCSCCBCHHHHHHHC-------
T ss_pred EHHHHHHHHHHHHhcCC-CCeEEEeCCCccCHHHHHHHHHHHcCCC
Confidence 47889999999998766 77 9999999999999999999998875
No 39
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=97.09 E-value=0.00061 Score=48.23 Aligned_cols=46 Identities=7% Similarity=0.205 Sum_probs=41.2
Q ss_pred ccHHHHHHHHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 4 LNLNLSKYAMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
-.++++++++..+++++.+|. |||++|+ .|++|+++.+.+.+|.+.
T Consensus 217 i~v~Dva~~~~~~~~~~~~g~~~~v~~~~-~s~~e~~~~i~~~~g~~~ 263 (342)
T 2x4g_A 217 IDAAEAGRGLLMALERGRIGERYLLTGHN-LEMADLTRRIAELLGQPA 263 (342)
T ss_dssp EEHHHHHHHHHHHHHHSCTTCEEEECCEE-EEHHHHHHHHHHHHTCCC
T ss_pred eeHHHHHHHHHHHHhCCCCCceEEEcCCc-ccHHHHHHHHHHHhCCCC
Confidence 468899999999998776687 9999999 999999999999999865
No 40
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=97.07 E-value=0.00089 Score=48.01 Aligned_cols=47 Identities=17% Similarity=0.140 Sum_probs=40.3
Q ss_pred ccHHHHHHHHHHHhcC--CCCCc-EEEecCceeeHHHHHHHHHHHh---CCce
Q psy15783 4 LNLNLSKYAMWMMLQQ--DTPQD-FVIATGETHSVREFVEAAFLYI---GKTI 50 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~--~~pgd-YnI~SG~~~SV~d~l~~~~~~~---g~~i 50 (86)
..++++++|+..++.+ ..++. |||++|+..|++|+++.+.+.+ |.+.
T Consensus 248 i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~ 300 (352)
T 1sb8_A 248 CYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSY 300 (352)
T ss_dssp EEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCC
T ss_pred EEHHHHHHHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCC
Confidence 3578899999988876 34577 9999999999999999999999 8764
No 41
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=97.06 E-value=0.00055 Score=49.67 Aligned_cols=46 Identities=26% Similarity=0.202 Sum_probs=39.1
Q ss_pred cHHHHHHHHHHHhcCCC-C-----C---c-EEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQDT-P-----Q---D-FVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~-p-----g---d-YnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
.++++++|+++++++.. . + . |||++|+.+|++|+++.+.+.+|.++
T Consensus 274 ~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~ 329 (397)
T 1gy8_A 274 HVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPI 329 (397)
T ss_dssp EHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCCCC
T ss_pred eHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHHHHHHHHhCCCC
Confidence 47889999999996532 2 2 6 99999999999999999999999765
No 42
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=97.05 E-value=0.001 Score=47.58 Aligned_cols=46 Identities=9% Similarity=0.101 Sum_probs=41.2
Q ss_pred cccHHHHHHHHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHhCCc
Q psy15783 3 ILNLNLSKYAMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYIGKT 49 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~ 49 (86)
...++++++++..+++++. |. |||++|...|++|+++.+.+.+|.+
T Consensus 221 ~i~v~Dva~ai~~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~ 267 (333)
T 2q1w_A 221 FVFVKDLARATVRAVDGVG-HGAYHFSSGTDVAIKELYDAVVEAMALP 267 (333)
T ss_dssp EEEHHHHHHHHHHHHTTCC-CEEEECSCSCCEEHHHHHHHHHHHTTCS
T ss_pred eEEHHHHHHHHHHHHhcCC-CCEEEeCCCCCccHHHHHHHHHHHhCCC
Confidence 3468899999999998766 77 9999999999999999999999875
No 43
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=97.05 E-value=0.00069 Score=48.83 Aligned_cols=46 Identities=13% Similarity=0.197 Sum_probs=40.2
Q ss_pred cHHHHHHHHHHHhcCC---CCCc-EEEec-CceeeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQD---TPQD-FVIAT-GETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~---~pgd-YnI~S-G~~~SV~d~l~~~~~~~g~~i 50 (86)
.++++++|+..++++. .+|. |||++ |+.+|++|+++.+.+.+|.+.
T Consensus 247 ~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~ 297 (372)
T 3slg_A 247 YVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFP 297 (372)
T ss_dssp EHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCT
T ss_pred EHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCc
Confidence 5789999999999876 3677 99999 699999999999999988653
No 44
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=97.04 E-value=0.00099 Score=47.57 Aligned_cols=46 Identities=26% Similarity=0.420 Sum_probs=41.0
Q ss_pred cccHHHHHH-HHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHhCCc
Q psy15783 3 ILNLNLSKY-AMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYIGKT 49 (86)
Q Consensus 3 ~gn~~~~v~-a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~ 49 (86)
...+.++++ ++..+++++. |. |||++|...|++|+++.+.+.+|.+
T Consensus 218 ~i~~~Dva~~a~~~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~ 265 (330)
T 2pzm_A 218 FLDMSDFLAIADLSLQEGRP-TGVFNVSTGEGHSIKEVFDVVLDYVGAT 265 (330)
T ss_dssp EEEHHHHHHHHHHHTSTTCC-CEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred ceeHHHHHHHHHHHHhhcCC-CCEEEeCCCCCCCHHHHHHHHHHHhCCC
Confidence 356889999 9999998766 77 9999999999999999999999875
No 45
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=97.04 E-value=0.00042 Score=48.97 Aligned_cols=46 Identities=22% Similarity=0.257 Sum_probs=39.5
Q ss_pred cHHHHHHHHHHHhcCC---CCCc-EEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQD---TPQD-FVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
.++++++|+++++++. .++. ||+++|+..|++||++.+.+..|.++
T Consensus 226 ~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~ 275 (330)
T 2c20_A 226 HVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEI 275 (330)
T ss_dssp EHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCC
T ss_pred eHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCC
Confidence 4789999999999753 2356 99999999999999999999998865
No 46
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=97.02 E-value=0.0014 Score=47.79 Aligned_cols=46 Identities=15% Similarity=0.185 Sum_probs=40.1
Q ss_pred cHHHHHHHHHHHhcCCCCCcEEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgdYnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
.++++++|+..+++++..+.|||++|+.+|++||++.+.+.+|.++
T Consensus 249 ~v~Dva~ai~~~l~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~ 294 (379)
T 2c5a_A 249 FIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKL 294 (379)
T ss_dssp EHHHHHHHHHHHHHSSCCSCEEECCCCCEEHHHHHHHHHHTTTCCC
T ss_pred EHHHHHHHHHHHhhccCCCeEEeCCCCccCHHHHHHHHHHHhCCCC
Confidence 3889999999999876433499999999999999999999998764
No 47
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=96.94 E-value=0.0011 Score=46.84 Aligned_cols=45 Identities=16% Similarity=0.217 Sum_probs=39.1
Q ss_pred cHHHHHHHHHHHhcCC---CCCc-EEEecCc-eeeHHHHHHHHHHHhCCc
Q psy15783 5 NLNLSKYAMWMMLQQD---TPQD-FVIATGE-THSVREFVEAAFLYIGKT 49 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~---~pgd-YnI~SG~-~~SV~d~l~~~~~~~g~~ 49 (86)
.+.++++|+..++++. ..|. |||++|. ..|++|+++.+.+.+|.+
T Consensus 224 ~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~ 273 (345)
T 2bll_A 224 DIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKH 273 (345)
T ss_dssp EHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTC
T ss_pred EHHHHHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCC
Confidence 5788999999999875 3577 9999996 999999999999988764
No 48
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=96.93 E-value=0.00067 Score=47.74 Aligned_cols=47 Identities=9% Similarity=-0.042 Sum_probs=40.4
Q ss_pred ccHHHHHHHHHHHhcCC----CCCc-EEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 4 LNLNLSKYAMWMMLQQD----TPQD-FVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~----~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
..++++++|+..++++. ..+. |||++|...|++|+++.+.+.+|.+.
T Consensus 196 i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 247 (315)
T 2ydy_A 196 THVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPS 247 (315)
T ss_dssp EEHHHHHHHHHHHHHHHHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCC
T ss_pred EEHHHHHHHHHHHHHhhccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCCh
Confidence 46789999999988653 4566 99999999999999999999999863
No 49
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=96.89 E-value=0.0022 Score=46.46 Aligned_cols=45 Identities=16% Similarity=0.168 Sum_probs=38.6
Q ss_pred cHHHHHHHHHHHhcCCC-CC--c-EEEecCceeeHHHHHHHHHHH---hCCce
Q psy15783 5 NLNLSKYAMWMMLQQDT-PQ--D-FVIATGETHSVREFVEAAFLY---IGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~-pg--d-YnI~SG~~~SV~d~l~~~~~~---~g~~i 50 (86)
.++++++|+++++++.. +| . |||++ ...|++|+++.+.+. +|.++
T Consensus 277 ~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~~~~g~~~ 328 (404)
T 1i24_A 277 DIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASLVTKAGSKLGLDV 328 (404)
T ss_dssp EHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHHHHHHHTTTCCC
T ss_pred EHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHHHHHHHHhhCCCc
Confidence 48899999999998765 46 6 99999 899999999999987 77764
No 50
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=96.84 E-value=0.00052 Score=47.86 Aligned_cols=44 Identities=14% Similarity=0.199 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHhcCC--CC--Cc-EEEecCceeeHHHHHHHHHHHhCCc
Q psy15783 6 LNLSKYAMWMMLQQD--TP--QD-FVIATGETHSVREFVEAAFLYIGKT 49 (86)
Q Consensus 6 ~~~~v~a~~~ll~~~--~p--gd-YnI~SG~~~SV~d~l~~~~~~~g~~ 49 (86)
++++++|+..++++. .+ +. ||+++|+..|++|+++.+.+.+|.+
T Consensus 189 v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~ 237 (299)
T 1n2s_A 189 AELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKA 237 (299)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccccccCceEEEeCCCCCCHHHHHHHHHHHhCCC
Confidence 889999999999875 33 66 9999999999999999999998765
No 51
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=96.77 E-value=0.0013 Score=47.67 Aligned_cols=45 Identities=4% Similarity=0.006 Sum_probs=40.4
Q ss_pred cHHHHHHHHHHHhcCCCC--Cc-EEEecCceeeHHHHHHHHHHHhCCc
Q psy15783 5 NLNLSKYAMWMMLQQDTP--QD-FVIATGETHSVREFVEAAFLYIGKT 49 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~p--gd-YnI~SG~~~SV~d~l~~~~~~~g~~ 49 (86)
.++++++++..+++++.+ +. ||+++|+..|++|+++.+.+..|.+
T Consensus 172 ~v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g~~ 219 (369)
T 3st7_A 172 YVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSR 219 (369)
T ss_dssp EHHHHHHHHHHHHHTCCCEETTEECCSCCEEEEHHHHHHHHHHHHHHH
T ss_pred EHHHHHHHHHHHHhCCcccCCceEEeCCCCceeHHHHHHHHHHHhCCC
Confidence 478899999999988876 67 9999999999999999999988765
No 52
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=96.70 E-value=0.0031 Score=43.88 Aligned_cols=48 Identities=10% Similarity=0.202 Sum_probs=42.0
Q ss_pred ccHHHHHHHHHHHhcCCCC-Cc-EEEecCceeeHHHHHHHHHHHhCCceEe
Q psy15783 4 LNLNLSKYAMWMMLQQDTP-QD-FVIATGETHSVREFVEAAFLYIGKTIVW 52 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~p-gd-YnI~SG~~~SV~d~l~~~~~~~g~~i~w 52 (86)
..++++++++..++.++.. |. |||+ |+..|++|+++.+.+.+|.++.+
T Consensus 172 i~~~Dva~~~~~~l~~~~~~g~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~ 221 (289)
T 3e48_A 172 ITRNDIARGVIAIIKNPDTWGKRYLLS-GYSYDMKELAAILSEASGTEIKY 221 (289)
T ss_dssp ECHHHHHHHHHHHHHCGGGTTCEEEEC-CEEEEHHHHHHHHHHHHTSCCEE
T ss_pred EEHHHHHHHHHHHHcCCCcCCceEEeC-CCcCCHHHHHHHHHHHHCCceeE
Confidence 4578999999999987664 77 9999 99999999999999999997643
No 53
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=96.67 E-value=0.0011 Score=50.87 Aligned_cols=46 Identities=2% Similarity=-0.049 Sum_probs=36.4
Q ss_pred cHHHHHHHHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
.++++++|++.+++++.++. ||++++...|++||++.+.+.+|.+.
T Consensus 341 ~v~Dva~ai~~~l~~~~~~g~~ni~~~~~~s~~el~~~i~~~~g~~~ 387 (516)
T 3oh8_A 341 AIDDLTDIYYRAIVDAQISGPINAVAPNPVSNADMTKILATSMHRPA 387 (516)
T ss_dssp EHHHHHHHHHHHHHCTTCCEEEEESCSCCEEHHHHHHHTTC------
T ss_pred eHHHHHHHHHHHHhCcccCCcEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 47889999999998876655 99999999999999999999888754
No 54
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=96.54 E-value=0.0027 Score=43.47 Aligned_cols=47 Identities=13% Similarity=-0.083 Sum_probs=40.9
Q ss_pred cccHHHHHHHHHHHhcCCCCCcEEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 3 ILNLNLSKYAMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~~pgdYnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
...++++++++..+++++..|.||+++ ...|++|+++.+.+.+|.+.
T Consensus 183 ~~~~~dva~~i~~~~~~~~~g~~~i~~-~~~s~~e~~~~~~~~~g~~~ 229 (273)
T 2ggs_A 183 PISARKLASAILELLELRKTGIIHVAG-ERISRFELALKIKEKFNLPG 229 (273)
T ss_dssp CCBHHHHHHHHHHHHHHTCCEEEECCC-CCEEHHHHHHHHHHHTTCCS
T ss_pred ceEHHHHHHHHHHHHhcCcCCeEEECC-CcccHHHHHHHHHHHhCCCh
Confidence 356889999999999876655599999 99999999999999999875
No 55
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=96.51 E-value=0.0019 Score=46.24 Aligned_cols=48 Identities=15% Similarity=0.313 Sum_probs=39.3
Q ss_pred cHHHHHHHHHHHhcC-----CCCCc-EEEecC--ceeeHHHHHHHHHHHhCCceEe
Q psy15783 5 NLNLSKYAMWMMLQQ-----DTPQD-FVIATG--ETHSVREFVEAAFLYIGKTIVW 52 (86)
Q Consensus 5 n~~~~v~a~~~ll~~-----~~pgd-YnI~SG--~~~SV~d~l~~~~~~~g~~i~w 52 (86)
.++++++|+..++++ ...+. |||++| +..|++||++.+.+.+|.+..|
T Consensus 234 ~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~ 289 (357)
T 1rkx_A 234 HVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASW 289 (357)
T ss_dssp ETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCE
T ss_pred eHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCcc
Confidence 577899999988864 24566 999995 6899999999999999987543
No 56
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=96.17 E-value=0.0071 Score=42.89 Aligned_cols=45 Identities=18% Similarity=0.120 Sum_probs=38.1
Q ss_pred ccHHHHHHHHHHHhcCCC----CCc-EEEecCceeeHHHHHHHHHHHhCCc
Q psy15783 4 LNLNLSKYAMWMMLQQDT----PQD-FVIATGETHSVREFVEAAFLYIGKT 49 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~----pgd-YnI~SG~~~SV~d~l~~~~~~~g~~ 49 (86)
-.++++++++..++++.. .+. ||+ +|...|++||++.+.+.+|.+
T Consensus 236 ~~v~Dva~~~~~~~~~~~~~~~~~~~~ni-~g~~~s~~e~~~~i~~~~g~~ 285 (342)
T 2hrz_A 236 ASPRSAVGFLIHGAMIDVEKVGPRRNLSM-PGLSATVGEQIEALRKVAGEK 285 (342)
T ss_dssp ECHHHHHHHHHHHHHSCHHHHCSCCEEEC-CCEEEEHHHHHHHHHHHHCHH
T ss_pred EehHHHHHHHHHHHhccccccCCccEEEc-CCCCCCHHHHHHHHHHHcCcc
Confidence 368899999999997753 456 999 589999999999999999875
No 57
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=96.13 E-value=0.0045 Score=48.89 Aligned_cols=46 Identities=15% Similarity=0.058 Sum_probs=38.4
Q ss_pred cHHHHHHHHHHHhcC-------CCCCc-EEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQ-------DTPQD-FVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~-------~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
.++++++|+.+++++ ...+. ||||+|+..|++|+++.+.+.+|.++
T Consensus 250 ~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~ 303 (699)
T 1z45_A 250 HVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDL 303 (699)
T ss_dssp EHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCC
T ss_pred EHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCC
Confidence 478899999988863 12345 99999999999999999999998865
No 58
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=95.98 E-value=0.0055 Score=42.69 Aligned_cols=42 Identities=10% Similarity=0.065 Sum_probs=36.1
Q ss_pred cHHHHHHHHHHHhcCCCC----Cc-EEEecCceeeHHHHHHHHHHHhC
Q psy15783 5 NLNLSKYAMWMMLQQDTP----QD-FVIATGETHSVREFVEAAFLYIG 47 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~p----gd-YnI~SG~~~SV~d~l~~~~~~~g 47 (86)
.++++++|+..+++++.+ +. |||++ ...|++|+++.+.+..|
T Consensus 215 ~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~ 261 (312)
T 2yy7_A 215 YMDDAIDATINIMKAPVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIP 261 (312)
T ss_dssp EHHHHHHHHHHHHHSCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCT
T ss_pred eHHHHHHHHHHHHhCcccccccCceEEeCC-CccCHHHHHHHHHHHCC
Confidence 478899999999987653 36 99995 89999999999999887
No 59
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=95.83 E-value=0.013 Score=43.31 Aligned_cols=42 Identities=14% Similarity=0.183 Sum_probs=37.2
Q ss_pred cHHHHHHHHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHhC
Q psy15783 5 NLNLSKYAMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYIG 47 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~g 47 (86)
.++++++|++.++..+..|. |||++|+..|++|+++.+.+ .|
T Consensus 301 ~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g 343 (427)
T 4f6c_A 301 FVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KE 343 (427)
T ss_dssp EHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SC
T ss_pred eHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cC
Confidence 47889999999998776777 99999999999999999987 44
No 60
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.83 E-value=0.02 Score=40.11 Aligned_cols=46 Identities=9% Similarity=-0.133 Sum_probs=38.9
Q ss_pred ccHHHHHHHHHHHhcCCC-CCcEEEecCceeeHHHHHHHHHHHhCCc
Q psy15783 4 LNLNLSKYAMWMMLQQDT-PQDFVIATGETHSVREFVEAAFLYIGKT 49 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~-pgdYnI~SG~~~SV~d~l~~~~~~~g~~ 49 (86)
..+.++++|++.++++.. .|.+++++|..+|++|+++.+.+.+|..
T Consensus 247 v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~ 293 (342)
T 1y1p_A 247 VSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSK 293 (342)
T ss_dssp EEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTS
T ss_pred eEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCc
Confidence 467889999999997654 5666788999999999999999999863
No 61
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=95.57 E-value=0.022 Score=39.76 Aligned_cols=44 Identities=9% Similarity=0.102 Sum_probs=36.4
Q ss_pred cccHHHHHHHHHHHhcCCCC-CcEEEecCceeeHHHHHHHHHHHhC
Q psy15783 3 ILNLNLSKYAMWMMLQQDTP-QDFVIATGETHSVREFVEAAFLYIG 47 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~~p-gdYnI~SG~~~SV~d~l~~~~~~~g 47 (86)
...+.++++|+..++++... |.|| +++..+|++|+++.+.+..+
T Consensus 224 ~i~v~Dva~a~~~~~~~~~~~g~~~-~~~~~~s~~e~~~~i~~~~~ 268 (322)
T 2p4h_X 224 MVHVDDVARAHIYLLENSVPGGRYN-CSPFIVPIEEMSQLLSAKYP 268 (322)
T ss_dssp EEEHHHHHHHHHHHHHSCCCCEEEE-CCCEEEEHHHHHHHHHHHCT
T ss_pred EEEHHHHHHHHHHHhhCcCCCCCEE-EcCCCCCHHHHHHHHHHhCC
Confidence 46789999999999976543 4599 88999999999999987663
No 62
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=95.54 E-value=0.012 Score=46.42 Aligned_cols=44 Identities=16% Similarity=0.219 Sum_probs=38.3
Q ss_pred cHHHHHHHHHHHhcCCC---CCc-EEEecCc-eeeHHHHHHHHHHHhCC
Q psy15783 5 NLNLSKYAMWMMLQQDT---PQD-FVIATGE-THSVREFVEAAFLYIGK 48 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~---pgd-YnI~SG~-~~SV~d~l~~~~~~~g~ 48 (86)
.++++++|+..+++++. .|. ||+++|+ ..|++|+++.+.+.+|.
T Consensus 539 ~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~ 587 (660)
T 1z7e_A 539 DIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEK 587 (660)
T ss_dssp EHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHH
T ss_pred EHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcC
Confidence 38899999999997754 577 9999997 99999999999988875
No 63
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=95.43 E-value=0.037 Score=40.40 Aligned_cols=46 Identities=11% Similarity=0.057 Sum_probs=38.8
Q ss_pred cH-HHHHHHHHHHhcCCC---CCc-EEEecCceeeHHHHHHHHHHHhCCceE
Q psy15783 5 NL-NLSKYAMWMMLQQDT---PQD-FVIATGETHSVREFVEAAFLYIGKTIV 51 (86)
Q Consensus 5 n~-~~~v~a~~~ll~~~~---pgd-YnI~SG~~~SV~d~l~~~~~~~g~~i~ 51 (86)
.+ +++++++..+++++. .|. |+++ +..+|++|+++.+.+.+|.++.
T Consensus 191 ~v~~Dva~ai~~~l~~~~~~~~g~~~~l~-~~~~s~~e~~~~i~~~~G~~~~ 241 (352)
T 1xgk_A 191 DAEHDVGPALLQIFKDGPQKWNGHRIALT-FETLSPVQVCAAFSRALNRRVT 241 (352)
T ss_dssp CHHHHHHHHHHHHHHHCHHHHTTCEEEEC-SEEECHHHHHHHHHHHHTSCEE
T ss_pred ecHHHHHHHHHHHHhCCchhhCCeEEEEe-cCCCCHHHHHHHHHHHHCCCCc
Confidence 46 789999999997652 577 9999 4789999999999999999863
No 64
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=95.31 E-value=0.0049 Score=41.38 Aligned_cols=45 Identities=7% Similarity=0.021 Sum_probs=37.7
Q ss_pred ccHHHHHHHHHHHhcCCC-CCc-EEEecC---ceeeHHHHHHHHHHHhCC
Q psy15783 4 LNLNLSKYAMWMMLQQDT-PQD-FVIATG---ETHSVREFVEAAFLYIGK 48 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~-pgd-YnI~SG---~~~SV~d~l~~~~~~~g~ 48 (86)
..+.++++++..+++++. .|. |||+++ +..|++|+++.+.+.+|.
T Consensus 203 ~~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 203 VPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp EEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred EcHHHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence 467889999999998765 476 999996 469999999999887764
No 65
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=95.29 E-value=0.015 Score=40.65 Aligned_cols=42 Identities=12% Similarity=0.063 Sum_probs=35.3
Q ss_pred cHHHHHHHHHHHhcCCC----CCc-EEEecCceeeHHHHHHHHHHHhC
Q psy15783 5 NLNLSKYAMWMMLQQDT----PQD-FVIATGETHSVREFVEAAFLYIG 47 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~----pgd-YnI~SG~~~SV~d~l~~~~~~~g 47 (86)
.+.++++|+.++++++. .|. |||++ ...|++|+++.+.+.+|
T Consensus 209 ~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~ 255 (317)
T 3ajr_A 209 YMPDALKALVDLYEADRDKLVLRNGYNVTA-YTFTPSELYSKIKERIP 255 (317)
T ss_dssp EHHHHHHHHHHHHHCCGGGCSSCSCEECCS-EEECHHHHHHHHHTTCC
T ss_pred EHHHHHHHHHHHHhCCccccccCceEecCC-ccccHHHHHHHHHHHCC
Confidence 47889999999997764 246 99985 68999999999998887
No 66
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=95.29 E-value=0.02 Score=43.50 Aligned_cols=42 Identities=14% Similarity=0.168 Sum_probs=36.9
Q ss_pred cHHHHHHHHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHh
Q psy15783 5 NLNLSKYAMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYI 46 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~ 46 (86)
.++++++|++.++.++..+. |||++|+..|++|+++.+.+..
T Consensus 382 ~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~ 424 (508)
T 4f6l_B 382 FVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE 424 (508)
T ss_dssp EHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC
T ss_pred cHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC
Confidence 47889999999998776777 9999999999999999888654
No 67
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=95.24 E-value=0.019 Score=43.59 Aligned_cols=45 Identities=11% Similarity=0.099 Sum_probs=37.4
Q ss_pred cHHHHHHHHHHHhcC-----CCCCc-EEEecCce--eeHHHHHHHHHHHhCCce
Q psy15783 5 NLNLSKYAMWMMLQQ-----DTPQD-FVIATGET--HSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 5 n~~~~v~a~~~ll~~-----~~pgd-YnI~SG~~--~SV~d~l~~~~~~~g~~i 50 (86)
.|+++++|+..++.+ ...+. ||+++++. +|++||++.+.+. |.++
T Consensus 330 ~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~~~ 382 (478)
T 4dqv_A 330 PVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-GYPI 382 (478)
T ss_dssp EHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-TCSC
T ss_pred eHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-CCCc
Confidence 477899999999865 33456 99999998 9999999999885 7765
No 68
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=95.15 E-value=0.039 Score=39.03 Aligned_cols=43 Identities=7% Similarity=0.101 Sum_probs=35.6
Q ss_pred cccHHHHHHHHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHh
Q psy15783 3 ILNLNLSKYAMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYI 46 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~ 46 (86)
...+.++++|++.++++...+. | ++++..+|++|+++.+.+..
T Consensus 228 ~i~v~Dva~a~~~~~~~~~~~~~~-~~~~~~~s~~e~~~~i~~~~ 271 (337)
T 2c29_D 228 FVHLDDLCNAHIYLFENPKAEGRY-ICSSHDCIILDLAKMLREKY 271 (337)
T ss_dssp EEEHHHHHHHHHHHHHCTTCCEEE-EECCEEEEHHHHHHHHHHHC
T ss_pred EEEHHHHHHHHHHHhcCcccCceE-EEeCCCCCHHHHHHHHHHHC
Confidence 4578899999999998766555 7 56777899999999998876
No 69
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=94.88 E-value=0.035 Score=39.15 Aligned_cols=44 Identities=11% Similarity=0.107 Sum_probs=35.8
Q ss_pred cccHHHHHHHHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHhC
Q psy15783 3 ILNLNLSKYAMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYIG 47 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~g 47 (86)
...+.++++|++.+++++.++. ||++ +...|++|+++.+.+..+
T Consensus 240 ~i~v~Dva~a~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~l~~~~~ 284 (338)
T 2rh8_A 240 IAHVEDVCRAHIFVAEKESASGRYICC-AANTSVPELAKFLSKRYP 284 (338)
T ss_dssp EEEHHHHHHHHHHHHHCTTCCEEEEEC-SEEECHHHHHHHHHHHCT
T ss_pred EEEHHHHHHHHHHHHcCCCcCCcEEEe-cCCCCHHHHHHHHHHhCC
Confidence 4578899999999998766555 8765 567999999999988765
No 70
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=94.61 E-value=0.046 Score=39.04 Aligned_cols=47 Identities=9% Similarity=-0.053 Sum_probs=39.8
Q ss_pred cHHHHHHHHHHHhcCCC-CCc-EEEe-cCceeeHHHHHHHHHHHhCCceE
Q psy15783 5 NLNLSKYAMWMMLQQDT-PQD-FVIA-TGETHSVREFVEAAFLYIGKTIV 51 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~-pgd-YnI~-SG~~~SV~d~l~~~~~~~g~~i~ 51 (86)
.+.++++++..+++.+. .+. |+++ +|...|++|+++.+.+.+|.++.
T Consensus 197 ~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~ 246 (346)
T 3i6i_A 197 AGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLP 246 (346)
T ss_dssp CHHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTSCCC
T ss_pred CHHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCc
Confidence 57889999999998765 355 8887 68999999999999999998763
No 71
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=94.29 E-value=0.032 Score=37.68 Aligned_cols=38 Identities=16% Similarity=0.212 Sum_probs=32.1
Q ss_pred ccHHHHHHHHHHHhcCC-CCCc-EEEecCceeeHHHHHHHH
Q psy15783 4 LNLNLSKYAMWMMLQQD-TPQD-FVIATGETHSVREFVEAA 42 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~-~pgd-YnI~SG~~~SV~d~l~~~ 42 (86)
-.+.++++++..+++++ ..|. |++++| .+|++|+++.+
T Consensus 195 i~~~Dva~~~~~~~~~~~~~g~~~~v~~~-~~~~~e~~~~i 234 (236)
T 3e8x_A 195 ITRHDVAKVIAELVDQQHTIGKTFEVLNG-DTPIAKVVEQL 234 (236)
T ss_dssp EEHHHHHHHHHHHTTCGGGTTEEEEEEEC-SEEHHHHHHTC
T ss_pred EeHHHHHHHHHHHhcCccccCCeEEEeCC-CcCHHHHHHHh
Confidence 35788999999999887 4677 999999 59999999864
No 72
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=94.09 E-value=0.057 Score=36.00 Aligned_cols=37 Identities=11% Similarity=0.204 Sum_probs=31.4
Q ss_pred ccHHHHHHHHHHHhcCCCC-Cc-EEEecCceeeHHHHHHH
Q psy15783 4 LNLNLSKYAMWMMLQQDTP-QD-FVIATGETHSVREFVEA 41 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~p-gd-YnI~SG~~~SV~d~l~~ 41 (86)
..+.++++++..+++++.+ |. |||++|. .+++|+++.
T Consensus 172 i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~-~~~~e~~~~ 210 (219)
T 3dqp_A 172 NTIGDVADTIKELVMTDHSIGKVISMHNGK-TAIKEALES 210 (219)
T ss_dssp EEHHHHHHHHHHHHTCGGGTTEEEEEEECS-EEHHHHHHT
T ss_pred ccHHHHHHHHHHHHhCccccCcEEEeCCCC-ccHHHHHHH
Confidence 4578899999999988764 77 9999996 999998874
No 73
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=94.04 E-value=0.029 Score=39.07 Aligned_cols=45 Identities=4% Similarity=0.010 Sum_probs=39.8
Q ss_pred cccHHHHHHHHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHhC
Q psy15783 3 ILNLNLSKYAMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYIG 47 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~g 47 (86)
.+.+.++++|++.+++++.++. |+++|+...++.+.+..+.+..+
T Consensus 222 ~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 222 PGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAELT 267 (281)
T ss_dssp CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHHH
Confidence 5788999999999999988888 99999999999999988887653
No 74
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=93.93 E-value=0.056 Score=37.64 Aligned_cols=46 Identities=9% Similarity=0.029 Sum_probs=38.5
Q ss_pred cHHHHHHHHHHHhcCC--CCCc-EEEecCceeeHHHHHHHHHHHhCCceE
Q psy15783 5 NLNLSKYAMWMMLQQD--TPQD-FVIATGETHSVREFVEAAFLYIGKTIV 51 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~--~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~i~ 51 (86)
.+.++++++..++..+ ..|. |+++ |...|++|+++.+.+.+|.++.
T Consensus 190 ~~~Dva~~~~~~l~~~~~~~g~~~~~~-g~~~s~~e~~~~~~~~~g~~~~ 238 (299)
T 2wm3_A 190 SVSDLGPVVLSLLKMPEKYVGQNIGLS-TCRHTAEEYAALLTKHTRKVVH 238 (299)
T ss_dssp CGGGHHHHHHHHHHSHHHHTTCEEECC-SEEECHHHHHHHHHHHHSSCEE
T ss_pred cHHHHHHHHHHHHcChhhhCCeEEEee-eccCCHHHHHHHHHHHHCCCce
Confidence 5678999999988764 2577 9997 5899999999999999999874
No 75
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=93.84 E-value=0.047 Score=39.52 Aligned_cols=44 Identities=11% Similarity=0.071 Sum_probs=36.2
Q ss_pred ccHHHHHHHHHHHhcCCCCCc-EEEecCceeeHHHHHHHHHHHhCC
Q psy15783 4 LNLNLSKYAMWMMLQQDTPQD-FVIATGETHSVREFVEAAFLYIGK 48 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~pgd-YnI~SG~~~SV~d~l~~~~~~~g~ 48 (86)
-.+.+++++++.++++...|+ ||++++ ..|++|+++.+.+..++
T Consensus 219 i~v~D~a~~v~~~l~~~~~g~~~~~~~~-~~s~~el~~~i~~~~~~ 263 (344)
T 2gn4_A 219 ITLDEGVSFVLKSLKRMHGGEIFVPKIP-SMKMTDLAKALAPNTPT 263 (344)
T ss_dssp ECHHHHHHHHHHHHHHCCSSCEEEECCC-EEEHHHHHHHHCTTCCE
T ss_pred EEHHHHHHHHHHHHhhccCCCEEecCCC-cEEHHHHHHHHHHhCCe
Confidence 357889999999998877888 887655 79999999999876544
No 76
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=93.58 E-value=0.14 Score=35.55 Aligned_cols=48 Identities=6% Similarity=-0.064 Sum_probs=39.4
Q ss_pred ccHHHHHHHHHHHhcCCC-CCc-EEEe-cCceeeHHHHHHHHHHHhCCceE
Q psy15783 4 LNLNLSKYAMWMMLQQDT-PQD-FVIA-TGETHSVREFVEAAFLYIGKTIV 51 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~-pgd-YnI~-SG~~~SV~d~l~~~~~~~g~~i~ 51 (86)
-.++++++++..+++++. .|. |+++ +|+..|.+|+++.+.+.+|.++.
T Consensus 195 i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~ 245 (313)
T 1qyd_A 195 VDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLD 245 (313)
T ss_dssp ECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCE
T ss_pred EEHHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhcCCCCc
Confidence 357889999999998764 355 7766 46899999999999999998764
No 77
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=93.41 E-value=0.13 Score=36.02 Aligned_cols=48 Identities=6% Similarity=-0.170 Sum_probs=39.6
Q ss_pred ccHHHHHHHHHHHhcCCC-CCc-EEEe-cCceeeHHHHHHHHHHHhCCceE
Q psy15783 4 LNLNLSKYAMWMMLQQDT-PQD-FVIA-TGETHSVREFVEAAFLYIGKTIV 51 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~-pgd-YnI~-SG~~~SV~d~l~~~~~~~g~~i~ 51 (86)
..++++++++..++.++. .|. |+++ +|...|++|+++.+.+.+|.++.
T Consensus 190 i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~ 240 (321)
T 3c1o_A 190 NYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFK 240 (321)
T ss_dssp ECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCC
T ss_pred eeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcce
Confidence 467889999999997654 466 7776 47999999999999999998753
No 78
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=92.94 E-value=0.15 Score=35.71 Aligned_cols=48 Identities=8% Similarity=-0.087 Sum_probs=39.2
Q ss_pred ccHHHHHHHHHHHhcCCC-CCc-EEEe-cCceeeHHHHHHHHHHHhCCceE
Q psy15783 4 LNLNLSKYAMWMMLQQDT-PQD-FVIA-TGETHSVREFVEAAFLYIGKTIV 51 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~-pgd-YnI~-SG~~~SV~d~l~~~~~~~g~~i~ 51 (86)
-.++++++++..+++++. .+. |+++ +|...|.+|+++.+.+.+|.++.
T Consensus 189 i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~ 239 (318)
T 2r6j_A 189 NYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFK 239 (318)
T ss_dssp ECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTCCCE
T ss_pred eeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHhCCCCc
Confidence 357889999999998754 355 6665 67999999999999999998764
No 79
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=92.78 E-value=0.17 Score=34.99 Aligned_cols=47 Identities=15% Similarity=0.011 Sum_probs=38.7
Q ss_pred cHHHHHHHHHHHhcCCC-CCc-EEEe-cCceeeHHHHHHHHHHHhCCceE
Q psy15783 5 NLNLSKYAMWMMLQQDT-PQD-FVIA-TGETHSVREFVEAAFLYIGKTIV 51 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~-pgd-YnI~-SG~~~SV~d~l~~~~~~~g~~i~ 51 (86)
.++++++++..+++++. .+. |+++ +|...|.+|+++.+.+.+|.++.
T Consensus 191 ~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~ 240 (308)
T 1qyc_A 191 KEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLE 240 (308)
T ss_dssp CHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCE
T ss_pred cHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCCCCc
Confidence 56889999999997754 355 7765 57899999999999999998764
No 80
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=92.67 E-value=0.18 Score=34.86 Aligned_cols=48 Identities=13% Similarity=-0.051 Sum_probs=38.9
Q ss_pred ccHHHHHHHHHHHhcCCC-CCc-EEEe-cCceeeHHHHHHHHHHHhCCceE
Q psy15783 4 LNLNLSKYAMWMMLQQDT-PQD-FVIA-TGETHSVREFVEAAFLYIGKTIV 51 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~-pgd-YnI~-SG~~~SV~d~l~~~~~~~g~~i~ 51 (86)
-.+.++++++..+++++. .+. |+++ +|...|.+|+++.+.+.+|.++.
T Consensus 189 i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 239 (307)
T 2gas_A 189 VTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLE 239 (307)
T ss_dssp ECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCE
T ss_pred eeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCCc
Confidence 367889999999998754 355 6665 57899999999999999998763
No 81
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=88.72 E-value=0.043 Score=38.37 Aligned_cols=48 Identities=4% Similarity=-0.113 Sum_probs=38.5
Q ss_pred ccccHHHHHHHHHHHhcCC---CCCc-EEEecCceeeHHHHHHHHHHHhCCc
Q psy15783 2 TILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHSVREFVEAAFLYIGKT 49 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~SV~d~l~~~~~~~g~~ 49 (86)
+.+.+.++++++..++... ..|. |++++|...|++++++.+.+.+|..
T Consensus 237 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~~ 288 (302)
T 1w6u_A 237 RLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKEQ 288 (302)
T ss_dssp SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHHH
T ss_pred CCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcccc
Confidence 3578899999999988643 2587 9999999999999988877766553
No 82
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=88.16 E-value=0.17 Score=33.85 Aligned_cols=35 Identities=11% Similarity=0.044 Sum_probs=28.8
Q ss_pred cccHHHHHHHHHHHhcCC---CCCc-EEEecCceeeHHH
Q psy15783 3 ILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHSVRE 37 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~SV~d 37 (86)
.+.+.+++++++.++..+ ..|. |++++|...|++|
T Consensus 214 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e 252 (255)
T 2dkn_A 214 GSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA 252 (255)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred CCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence 467889999999999765 4577 9999999888765
No 83
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=87.45 E-value=0.18 Score=34.56 Aligned_cols=42 Identities=19% Similarity=0.105 Sum_probs=34.6
Q ss_pred cccHHHHHHHHHHHhcCC---CCCc-EEEecCceeeHHHHHHHHHH
Q psy15783 3 ILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHSVREFVEAAFL 44 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~SV~d~l~~~~~ 44 (86)
.+...++++++..++... ..|. |++..|...|.+||++.+.+
T Consensus 230 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~ 275 (278)
T 2bgk_A 230 LLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKH 275 (278)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCS
T ss_pred cCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhh
Confidence 567888999999988643 3587 99999999999999987654
No 84
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=85.39 E-value=0.42 Score=32.16 Aligned_cols=35 Identities=6% Similarity=0.079 Sum_probs=28.1
Q ss_pred ccccHHHHHHHHHHHhcCC---CCCc-EEEecCceeeHH
Q psy15783 2 TILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHSVR 36 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~SV~ 36 (86)
++|.+.+++++++.++... ..|. |+|++|..+|++
T Consensus 217 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~~ 255 (255)
T 1fmc_A 217 RLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQELN 255 (255)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCCC
T ss_pred cCCCHHHHHHHHHHHhCCccccCCCcEEEECCceeccCC
Confidence 3678899999999998653 3577 999999998863
No 85
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=84.40 E-value=0.38 Score=31.37 Aligned_cols=32 Identities=9% Similarity=0.122 Sum_probs=25.1
Q ss_pred cHHHHHHHHHHHhcCCCCCcEEEecCceeeHH
Q psy15783 5 NLNLSKYAMWMMLQQDTPQDFVIATGETHSVR 36 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgdYnI~SG~~~SV~ 36 (86)
.++++++++..+++++..+-||+++++..++.
T Consensus 181 ~~~Dva~~~~~~~~~~~~~~~~i~~~~~~~~~ 212 (215)
T 2a35_A 181 EACDLARALWRLALEEGKGVRFVESDELRKLG 212 (215)
T ss_dssp HHHHHHHHHHHHHTCCCSEEEEEEHHHHHHHH
T ss_pred eHHHHHHHHHHHHhcCCCCceEEcHHHHHHhh
Confidence 46779999999998876444999998776654
No 86
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=83.08 E-value=0.52 Score=32.80 Aligned_cols=48 Identities=8% Similarity=0.063 Sum_probs=39.1
Q ss_pred ccccHHHHHHHHHHHhcCC---CCCc-EEEecCceee-HHHHHHHHHHHhCCc
Q psy15783 2 TILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHS-VREFVEAAFLYIGKT 49 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~S-V~d~l~~~~~~~g~~ 49 (86)
++|.+.++++++..|+... ..|. |+|..|...+ +.++.+++.+..|.+
T Consensus 223 r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~ 275 (281)
T 3svt_A 223 RQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRD 275 (281)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTT
T ss_pred CCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCc
Confidence 4678899999999888643 2588 9999999988 888888888888765
No 87
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=80.91 E-value=0.86 Score=31.38 Aligned_cols=44 Identities=5% Similarity=-0.045 Sum_probs=26.9
Q ss_pred ccccHHHHHHHHHHHhcCC----CCCc-EEEecCceeeHHHHHHHHHHH
Q psy15783 2 TILNLNLSKYAMWMMLQQD----TPQD-FVIATGETHSVREFVEAAFLY 45 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~----~pgd-YnI~SG~~~SV~d~l~~~~~~ 45 (86)
+.+...++++++..++... ..|. |++..|...+++++++.+.+.
T Consensus 228 ~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~ 276 (278)
T 1spx_A 228 VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKL 276 (278)
T ss_dssp SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC-----------
T ss_pred CCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHH
Confidence 3567889999998888642 4588 999999999999999877653
No 88
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=75.57 E-value=2.5 Score=27.75 Aligned_cols=31 Identities=26% Similarity=0.194 Sum_probs=26.1
Q ss_pred cHHHHHHHHHHHhcCCC-CCc-EEEecCceeeH
Q psy15783 5 NLNLSKYAMWMMLQQDT-PQD-FVIATGETHSV 35 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~-pgd-YnI~SG~~~SV 35 (86)
.+.++++|++.+++++. .|. |++++.++.+-
T Consensus 193 ~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~~~ 225 (227)
T 3dhn_A 193 SVEDYAAAMIDELEHPKHHQERFTIGYLEHHHH 225 (227)
T ss_dssp EHHHHHHHHHHHHHSCCCCSEEEEEECCSCCC-
T ss_pred eHHHHHHHHHHHHhCccccCcEEEEEeehhccc
Confidence 58899999999998876 677 99999988763
No 89
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=74.51 E-value=3.3 Score=26.41 Aligned_cols=29 Identities=10% Similarity=-0.070 Sum_probs=23.3
Q ss_pred cccHHHHHHHHHHHhcCCC-CCc-EEEecCc
Q psy15783 3 ILNLNLSKYAMWMMLQQDT-PQD-FVIATGE 31 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~~-pgd-YnI~SG~ 31 (86)
...+.++++++..+++++. .|. |+|++|.
T Consensus 175 ~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g~ 205 (206)
T 1hdo_A 175 VISKHDLGHFMLRCLTTDEYDGHSTYPSHQY 205 (206)
T ss_dssp EEEHHHHHHHHHHTTSCSTTTTCEEEEECCC
T ss_pred ccCHHHHHHHHHHHhcCccccccceeeeccc
Confidence 3467889999999998765 577 9999885
No 90
>3goe_A DNA repair protein RAD60; SUMO-like domain, sumoylation, SUMO, genome stability, DNA damage, DNA recombination, nucleus; HET: DNA; 0.97A {Schizosaccharomyces pombe} PDB: 3rcz_A*
Probab=67.41 E-value=3.5 Score=25.45 Aligned_cols=54 Identities=9% Similarity=0.332 Sum_probs=42.1
Q ss_pred HhcCCCCCcEEEecCceeeHHHHHHHHHHHhCCceEeecCcccccceeccCCcEEEEEcCCCcCCCCCC
Q psy15783 16 MLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRVKVNENYFRPTEVI 84 (86)
Q Consensus 16 ll~~~~pgdYnI~SG~~~SV~d~l~~~~~~~g~~i~w~g~~~~e~~~~~~~~~~~v~iDp~~~RP~dv~ 84 (86)
++...+++|+-+.=....+|.+++..-.+.-|++. +..+...+|=.++||..-|
T Consensus 13 ~~~~~~~~dl~f~I~~~t~v~kLi~ayc~~~~I~~---------------~~~IrllFDGdRLdp~~tp 66 (82)
T 3goe_A 13 LLRSSKSEDLRLSIPVDFTVKDLIKRYCTEVKISF---------------HERIRLEFEGEWLDPNDQV 66 (82)
T ss_dssp EEEESSSCCEEEEEETTSBHHHHHHHHHHHHTCCC---------------CTTCEEEETTEECCTTSBG
T ss_pred hhhccCCCCeEEEecCCCCHHHHHHHHHHHcCCCc---------------CceEEEEEcCcccCccCCh
Confidence 44556778877777888899999999999999864 2245889999999987644
No 91
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=62.65 E-value=3.5 Score=28.13 Aligned_cols=36 Identities=17% Similarity=0.300 Sum_probs=28.6
Q ss_pred cccHHHHHHHHHHHhcCC-CCCc-EEEecCceeeHHHH
Q psy15783 3 ILNLNLSKYAMWMMLQQD-TPQD-FVIATGETHSVREF 38 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~-~pgd-YnI~SG~~~SV~d~ 38 (86)
.+...++++++..++... ..|. |+|++|+..|+.|+
T Consensus 221 ~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~~ 258 (267)
T 2gdz_A 221 ILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQDY 258 (267)
T ss_dssp CBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECCC
T ss_pred CCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccCc
Confidence 357888999998888654 4687 99999999887664
No 92
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=61.41 E-value=6.4 Score=25.35 Aligned_cols=32 Identities=13% Similarity=0.154 Sum_probs=20.1
Q ss_pred cHHHHHHHHHHHhcCCC-CCc-EEEecCceeeHH
Q psy15783 5 NLNLSKYAMWMMLQQDT-PQD-FVIATGETHSVR 36 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~-pgd-YnI~SG~~~SV~ 36 (86)
.+.+++++++.+++++. .|. ||++.....|=+
T Consensus 186 ~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~~~~ 219 (221)
T 3ew7_A 186 SMEDYAIAVLDEIERPNHLNEHFTVAGKLEHHHH 219 (221)
T ss_dssp CHHHHHHHHHHHHHSCSCTTSEEECCC-------
T ss_pred eHHHHHHHHHHHHhCccccCCEEEECCCCccccc
Confidence 46778999999997765 477 999887766543
No 93
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=61.32 E-value=4.3 Score=27.63 Aligned_cols=33 Identities=6% Similarity=-0.008 Sum_probs=25.2
Q ss_pred ccccHHHHHHHHHHHhcCC---CCCc-EEEecCceee
Q psy15783 2 TILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHS 34 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~S 34 (86)
++|.+.++++++..|+... ..|. |+|..|...|
T Consensus 223 r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~~s 259 (259)
T 4e6p_A 223 RMGTAEDLTGMAIFLASAESDYIVSQTYNVDGGNWMS 259 (259)
T ss_dssp SCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred CCcCHHHHHHHHHHHhCCccCCCCCCEEEECcChhcC
Confidence 4677888999988887543 3477 9999998764
No 94
>2id1_A Hypothetical protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.00A {Chromobacterium violaceum} SCOP: d.218.1.12
Probab=55.68 E-value=14 Score=24.25 Aligned_cols=40 Identities=18% Similarity=0.257 Sum_probs=26.8
Q ss_pred CCc-EEEecCcee----eHHHHHHHHHHHhCCceEeecCcccccce
Q psy15783 22 PQD-FVIATGETH----SVREFVEAAFLYIGKTIVWEGTGKDEVGK 62 (86)
Q Consensus 22 pgd-YnI~SG~~~----SV~d~l~~~~~~~g~~i~w~g~~~~e~~~ 62 (86)
..| |+||||.+. ++.+-++..++..|... .+-||.++..+
T Consensus 33 ~~DyfVIaTg~S~rqv~Aiad~v~~~lk~~g~~~-~~~EG~~~~~W 77 (130)
T 2id1_A 33 LFQRMIVATGDSNRQVKALANSVQVKLKEAGVDI-VGSEGHESGEW 77 (130)
T ss_dssp SCSEEEEEECSSHHHHHHHHHHHHHHHHHTTCCC-CBCCSTTTSSE
T ss_pred ccCEEEEEEcCCHHHHHHHHHHHHHHHHHcCCcC-ccccCCCCCCE
Confidence 357 999999985 35566666677777753 45556555555
No 95
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=55.21 E-value=9.2 Score=26.02 Aligned_cols=35 Identities=6% Similarity=0.079 Sum_probs=26.6
Q ss_pred ccccHHHHHHHHHHHhcCC---CCCc-EEEecCceeeHH
Q psy15783 2 TILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHSVR 36 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~SV~ 36 (86)
++|...+++++++.|+... ..|. ++|..|...++.
T Consensus 218 r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~~ 256 (256)
T 3gaf_A 218 RLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGVQELD 256 (256)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC--
T ss_pred CCCCHHHHHHHHHHHcCCcccCccCCEEEECCCccccCC
Confidence 4678889999998888643 3588 999999988763
No 96
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=54.22 E-value=14 Score=23.93 Aligned_cols=31 Identities=16% Similarity=0.207 Sum_probs=23.0
Q ss_pred ccHHHHHHHHHHHhcCCC-CCc-EEEecCceee
Q psy15783 4 LNLNLSKYAMWMMLQQDT-PQD-FVIATGETHS 34 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~-pgd-YnI~SG~~~S 34 (86)
-.+.+++++++.+++++. .|. |+++.-++.+
T Consensus 187 i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~~~~ 219 (224)
T 3h2s_A 187 ITTGNMALAILDQLEHPTAIRDRIVVRDADLEH 219 (224)
T ss_dssp CCHHHHHHHHHHHHHSCCCTTSEEEEEECC---
T ss_pred EeHHHHHHHHHHHhcCccccCCEEEEecCcchh
Confidence 357889999999998776 577 9998876654
No 97
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=53.42 E-value=4.6 Score=27.39 Aligned_cols=34 Identities=12% Similarity=0.149 Sum_probs=26.1
Q ss_pred ccccHHHHHHHHHHHhcCC---CCCc-EEEecCceeeH
Q psy15783 2 TILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHSV 35 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~SV 35 (86)
+++...++++++..++... ..|. |+|++|...|+
T Consensus 223 ~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~s~ 260 (260)
T 2zat_A 223 RLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTASRL 260 (260)
T ss_dssp SCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCCCCC
T ss_pred CCCCHHHHHHHHHHHcCcccCCccCCEEEECCCccccC
Confidence 3567788899988888643 2587 99999988763
No 98
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=52.84 E-value=11 Score=24.83 Aligned_cols=31 Identities=13% Similarity=0.147 Sum_probs=23.5
Q ss_pred cccHHHHHHHHHHHhcCC---CCCc-EEEecCcee
Q psy15783 3 ILNLNLSKYAMWMMLQQD---TPQD-FVIATGETH 33 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~ 33 (86)
.+.+.+++++++.++... ..|. |++++|...
T Consensus 209 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~ 243 (244)
T 3d3w_A 209 FAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGFWA 243 (244)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CcCHHHHHHHHHHHcCccccCCCCCEEEECCCccC
Confidence 467888999999888643 3577 999988643
No 99
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=52.59 E-value=4.7 Score=27.08 Aligned_cols=32 Identities=9% Similarity=0.096 Sum_probs=17.0
Q ss_pred cccHHHHHHHHHHHhcCCC---CCc-EEEecCceee
Q psy15783 3 ILNLNLSKYAMWMMLQQDT---PQD-FVIATGETHS 34 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~~---pgd-YnI~SG~~~S 34 (86)
.+...++++++..++.... .|. |++..|...+
T Consensus 217 ~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~~ 252 (253)
T 3qiv_A 217 MGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQIIR 252 (253)
T ss_dssp ---CCHHHHHHHHHHSGGGTTCCSCEEEC-------
T ss_pred CCCHHHHHHHHHHHcCccccCCCCCEEEECCCeecC
Confidence 4567788999888886443 588 9999997653
No 100
>2o5a_A BH1328 protein; BHR21, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.70A {Bacillus halodurans} SCOP: d.218.1.12
Probab=51.32 E-value=18 Score=23.43 Aligned_cols=49 Identities=22% Similarity=0.234 Sum_probs=29.1
Q ss_pred Cc-EEEecCcee----eHHHHHHHHHHHhCCceEeecCccccccee-ccCCcEEEE
Q psy15783 23 QD-FVIATGETH----SVREFVEAAFLYIGKTIVWEGTGKDEVGKE-KDTGIVRVK 72 (86)
Q Consensus 23 gd-YnI~SG~~~----SV~d~l~~~~~~~g~~i~w~g~~~~e~~~~-~~~~~~~v~ 72 (86)
.| |+||||.+. ++.+-++..++..|... ++-||.++..+- -+-|.+.|-
T Consensus 34 ~DyfVIatg~S~rqv~Aiad~v~~~lk~~g~~~-~~~EG~~~~~WvLlD~GdVvVH 88 (125)
T 2o5a_A 34 ADFFLICHGNSEKQVQAIAHELKKVAQEQGIEI-KRLEGYEQARWVLIDLGDVVVH 88 (125)
T ss_dssp -CEEEEEEESSHHHHHHHHHHHHHHHHHTTCCC-CEEESTTTTSEEEEECSSEEEE
T ss_pred cCEEEEEEcCCHHHHHHHHHHHHHHHHHcCCcc-ccccCCCCCCEEEEeCCCEEEE
Confidence 47 999999875 45566666667777753 444555555552 234444443
No 101
>3ups_A Iojap-like protein; PSI-biology, MCSG, midwest center for structural genomics, U function, structural genomics; HET: MSE; 1.75A {Zymomonas mobilis subsp}
Probab=50.38 E-value=17 Score=23.90 Aligned_cols=39 Identities=15% Similarity=0.137 Sum_probs=24.0
Q ss_pred Cc-EEEecCcee----eHHHHHHHHHHHhCCceEeecCcccccce
Q psy15783 23 QD-FVIATGETH----SVREFVEAAFLYIGKTIVWEGTGKDEVGK 62 (86)
Q Consensus 23 gd-YnI~SG~~~----SV~d~l~~~~~~~g~~i~w~g~~~~e~~~ 62 (86)
.| |+||||.+. ++.+-++..++..|... ++-||.++..|
T Consensus 50 ~DyfVIatg~S~rqv~Aiad~v~~~lk~~g~~~-~~~EG~~~~~W 93 (136)
T 3ups_A 50 ADYMVIASGRSSRQVTAMAQKLADRIKAATGYV-SKIEGLPAADW 93 (136)
T ss_dssp CSEEEEEECSSHHHHHHHHHHHHHHHHHHHCCC-CEEESCSSCSE
T ss_pred cCEEEEEEcCCHHHHHHHHHHHHHHHHHcCCcc-CcccCCCCCCE
Confidence 57 999999875 34455555555556542 44455555555
No 102
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=49.89 E-value=14 Score=24.89 Aligned_cols=33 Identities=3% Similarity=0.054 Sum_probs=24.8
Q ss_pred ccccHHHHHHHHHHHhcCC---CCCc-EEEecCceee
Q psy15783 2 TILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHS 34 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~S 34 (86)
+++...++++++..++... ..|. |++..|...|
T Consensus 226 ~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s 262 (263)
T 3ai3_A 226 RFASPEELANFFVFLCSERATYSVGSAYFVDGGMLKT 262 (263)
T ss_dssp SCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred CCcCHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence 3567888999988888643 2477 9999987765
No 103
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=49.42 E-value=13 Score=24.82 Aligned_cols=29 Identities=14% Similarity=0.015 Sum_probs=22.3
Q ss_pred cccHHHHHHHHHHHhcCC---CCCc-EEEecCc
Q psy15783 3 ILNLNLSKYAMWMMLQQD---TPQD-FVIATGE 31 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~ 31 (86)
.+.+.++++++..++... ..|. |+|++|.
T Consensus 241 ~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~ 273 (274)
T 1ja9_A 241 IGYPADIGRAVSALCQEESEWINGQVIKLTGGG 273 (274)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ccCHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence 457888999999888653 2577 9998884
No 104
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=49.29 E-value=19 Score=24.45 Aligned_cols=33 Identities=12% Similarity=0.074 Sum_probs=25.5
Q ss_pred ccccHHHHHHHHHHHhcCC---CCCc-EEEecCceee
Q psy15783 2 TILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHS 34 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~S 34 (86)
+++...+++++++.|+... ..|. ++|..|...|
T Consensus 233 ~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~s 269 (269)
T 3gk3_A 233 RLGRPDEVAALIAFLCSDDAGFVTGADLAINGGMHMS 269 (269)
T ss_dssp SCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTSCCC
T ss_pred CccCHHHHHHHHHHHhCCCcCCeeCcEEEECCCEeCc
Confidence 3567889999999888654 3587 9999997654
No 105
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=47.88 E-value=9.2 Score=26.22 Aligned_cols=34 Identities=15% Similarity=0.253 Sum_probs=26.1
Q ss_pred ccccHHHHHHHHHHHhcCCC---CCc-EEEecCceeeH
Q psy15783 2 TILNLNLSKYAMWMMLQQDT---PQD-FVIATGETHSV 35 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~~---pgd-YnI~SG~~~SV 35 (86)
+++...+++++++.|+.... .|. |+|..|.+.++
T Consensus 243 ~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~~ 280 (281)
T 3s55_A 243 PFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATARM 280 (281)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGGC
T ss_pred CCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccCC
Confidence 35678899999999886542 477 99999987653
No 106
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=47.72 E-value=9.4 Score=26.96 Aligned_cols=45 Identities=11% Similarity=0.098 Sum_probs=35.3
Q ss_pred ccHHHHHHHHHHHhcCC---CCCc-EEEecCcee-----------------eHHHHHHHHHHHhCC
Q psy15783 4 LNLNLSKYAMWMMLQQD---TPQD-FVIATGETH-----------------SVREFVEAAFLYIGK 48 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~-----------------SV~d~l~~~~~~~g~ 48 (86)
+...+++.++..|+... ..|. |+|..|... ++.|+++.+.+.+|.
T Consensus 247 ~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~ 312 (322)
T 3qlj_A 247 MAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGK 312 (322)
T ss_dssp TCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhc
Confidence 45667888888888543 2588 999999987 779999999888764
No 107
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=45.83 E-value=19 Score=23.66 Aligned_cols=33 Identities=9% Similarity=0.032 Sum_probs=24.7
Q ss_pred ccccHHHHHHHHHHHhcCCC-CCc-EEEecCceee
Q psy15783 2 TILNLNLSKYAMWMMLQQDT-PQD-FVIATGETHS 34 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~~-pgd-YnI~SG~~~S 34 (86)
+++...+++++++.++.... .|. +++..|...|
T Consensus 189 ~~~~~~dvA~~~~~l~~~~~~tG~~i~vdgG~~~s 223 (223)
T 3uce_A 189 KVGEASDIAMAYLFAIQNSYMTGTVIDVDGGALLG 223 (223)
T ss_dssp SCBCHHHHHHHHHHHHHCTTCCSCEEEESTTGGGC
T ss_pred CccCHHHHHHHHHHHccCCCCCCcEEEecCCeecC
Confidence 35678889999888886443 577 9998887643
No 108
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=44.93 E-value=7.5 Score=26.14 Aligned_cols=38 Identities=11% Similarity=0.084 Sum_probs=29.0
Q ss_pred cccHHHHHHHHHHHhcCC---CCCc-EEEecCceeeHHHHHH
Q psy15783 3 ILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHSVREFVE 40 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~SV~d~l~ 40 (86)
++...+++++++.|+... ..|. +++..|...+++++.+
T Consensus 227 ~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~ 268 (271)
T 3ek2_A 227 NVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMAG 268 (271)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred CCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhhh
Confidence 567888999999888643 3588 9999999988876543
No 109
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=44.92 E-value=21 Score=23.46 Aligned_cols=30 Identities=10% Similarity=0.018 Sum_probs=22.4
Q ss_pred cccHHHHHHHHHHHhcCC---CCCc-EEEecCce
Q psy15783 3 ILNLNLSKYAMWMMLQQD---TPQD-FVIATGET 32 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~ 32 (86)
.+...++++++..++... ..|. |+|++|..
T Consensus 213 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~ 246 (247)
T 2hq1_A 213 FGTPEEVANVVGFLASDDSNYITGQVINIDGGLV 246 (247)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-
T ss_pred CCCHHHHHHHHHHHcCcccccccCcEEEeCCCcc
Confidence 567888999988888643 3577 99998863
No 110
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=43.91 E-value=20 Score=23.68 Aligned_cols=31 Identities=10% Similarity=0.027 Sum_probs=23.0
Q ss_pred cccHHHHHHHHHHHhcCCC--CCc-EEEecCcee
Q psy15783 3 ILNLNLSKYAMWMMLQQDT--PQD-FVIATGETH 33 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~~--pgd-YnI~SG~~~ 33 (86)
.+...++++++..++..+. .|. |+|+.+.+.
T Consensus 194 ~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~~~ 227 (236)
T 3qvo_A 194 IVSRKSVAALITDIIDKPEKHIGENIGINQPGTD 227 (236)
T ss_dssp EEEHHHHHHHHHHHHHSTTTTTTEEEEEECSSCC
T ss_pred EECHHHHHHHHHHHHcCcccccCeeEEecCCCCC
Confidence 4567788888888887655 566 888887654
No 111
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=43.80 E-value=5.1 Score=27.04 Aligned_cols=44 Identities=14% Similarity=0.018 Sum_probs=33.7
Q ss_pred ccHHHHHHHHHHHhcCCCCC-c-EEEecCceeeHHHHHHHHHHHhCCc
Q psy15783 4 LNLNLSKYAMWMMLQQDTPQ-D-FVIATGETHSVREFVEAAFLYIGKT 49 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~pg-d-YnI~SG~~~SV~d~l~~~~~~~g~~ 49 (86)
-.+++++++++.+++++..+ . |+++++...+..|+... +.+|..
T Consensus 179 ~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~lg~~ 224 (267)
T 3ay3_A 179 LSVDDFMRLMKRAFVAPKLGCTVVYGASANTESWWDNDKS--AFLGWV 224 (267)
T ss_dssp CCHHHHHHHHHHHHHSSCCCEEEEEECCSCSSCCBCCGGG--GGGCCC
T ss_pred ccHHHHHHHHHHHHhCCCCCceeEecCCCccccccCHHHH--HHcCCC
Confidence 35788999999999887653 5 99998888887777665 666654
No 112
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=42.20 E-value=23 Score=24.17 Aligned_cols=33 Identities=6% Similarity=0.082 Sum_probs=25.3
Q ss_pred ccccHHHHHHHHHHHhcCC-CCCc-EEEecCceee
Q psy15783 2 TILNLNLSKYAMWMMLQQD-TPQD-FVIATGETHS 34 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~-~pgd-YnI~SG~~~S 34 (86)
++|.+.++++++..|.+.. ..|. |+|..|...+
T Consensus 224 r~~~~~dva~av~~L~~~~~itG~~i~vdGG~~~~ 258 (260)
T 3un1_A 224 RMGEIRDVVDAVLYLEHAGFITGEILHVDGGQNAG 258 (260)
T ss_dssp SCBCHHHHHHHHHHHHHCTTCCSCEEEESTTGGGC
T ss_pred CCcCHHHHHHHHHHhcccCCCCCcEEEECCCeecc
Confidence 4678899999988886544 3688 9999997643
No 113
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=40.48 E-value=22 Score=24.08 Aligned_cols=29 Identities=10% Similarity=0.060 Sum_probs=21.6
Q ss_pred cccHHHHHHHHHHHhcCC---CCCc-EEEecCc
Q psy15783 3 ILNLNLSKYAMWMMLQQD---TPQD-FVIATGE 31 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~ 31 (86)
.+...+++++++.++... ..|. |+|..|+
T Consensus 240 ~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG~ 272 (272)
T 4e3z_A 240 AGMPEEVADAILYLLSPSASYVTGSILNVSGGR 272 (272)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CcCHHHHHHHHHHHhCCccccccCCEEeecCCC
Confidence 466788899988888543 3577 8888874
No 114
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=40.48 E-value=23 Score=23.94 Aligned_cols=37 Identities=8% Similarity=-0.029 Sum_probs=25.7
Q ss_pred ccccHHHHHHHHHHHhcCC---CCCc-EEEecCceeeHHHH
Q psy15783 2 TILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHSVREF 38 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~SV~d~ 38 (86)
+++...++++++..++... ..|. |++..|...+..|+
T Consensus 219 ~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~~~~ 259 (261)
T 2wyu_A 219 RNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIMGMEL 259 (261)
T ss_dssp SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC---
T ss_pred CCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCccccCCCC
Confidence 3577888999998888532 3577 99999987665443
No 115
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=38.99 E-value=26 Score=23.55 Aligned_cols=32 Identities=13% Similarity=0.090 Sum_probs=24.0
Q ss_pred cccHHHHHHHHHHHhcCC---CCCc-EEEecCceee
Q psy15783 3 ILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHS 34 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~S 34 (86)
++...+++++++.++... ..|. |++.+|...+
T Consensus 213 ~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~~~~ 248 (256)
T 2d1y_A 213 LGKPEEVAEAVLFLASEKASFITGAILPVDGGMTAS 248 (256)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred CcCHHHHHHHHHHHhCchhcCCCCCEEEECCCcccc
Confidence 567888899988888643 3577 9999987654
No 116
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=37.29 E-value=25 Score=23.50 Aligned_cols=31 Identities=3% Similarity=-0.068 Sum_probs=23.7
Q ss_pred ccccHHHHHHHHHHHhcCCC---CCc-EEEecCce
Q psy15783 2 TILNLNLSKYAMWMMLQQDT---PQD-FVIATGET 32 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~~---pgd-YnI~SG~~ 32 (86)
++|...++++++..|+.... .|. |+|..|..
T Consensus 211 r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~~ 245 (246)
T 3osu_A 211 RFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMY 245 (246)
T ss_dssp SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTSC
T ss_pred CCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence 46788899999988886442 477 99998853
No 117
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=37.03 E-value=22 Score=24.35 Aligned_cols=33 Identities=6% Similarity=-0.058 Sum_probs=25.4
Q ss_pred ccccHHHHHHHHHHHhcC-C---CCCc-EEEecCceee
Q psy15783 2 TILNLNLSKYAMWMMLQQ-D---TPQD-FVIATGETHS 34 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~-~---~pgd-YnI~SG~~~S 34 (86)
++|...++++++..|+.. . ..|. |+|..|...|
T Consensus 232 r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~s 269 (269)
T 4dmm_A 232 RYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVMA 269 (269)
T ss_dssp SCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCCC
T ss_pred CCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCeecC
Confidence 467888999999888865 2 3588 9999987654
No 118
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=36.79 E-value=26 Score=23.18 Aligned_cols=32 Identities=9% Similarity=0.016 Sum_probs=23.8
Q ss_pred ccccHHHHHHHHHHHhcCC---CCCc-EEEecCcee
Q psy15783 2 TILNLNLSKYAMWMMLQQD---TPQD-FVIATGETH 33 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~ 33 (86)
+++...+++++++.|+... ..|. |++..|...
T Consensus 211 ~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~~ 246 (247)
T 3lyl_A 211 QIGEPKDIAAAVAFLASEEAKYITGQTLHVNGGMYM 246 (247)
T ss_dssp CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred CCcCHHHHHHHHHHHhCCCcCCccCCEEEECCCEec
Confidence 3567888999998888543 3577 999888654
No 119
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=35.34 E-value=30 Score=22.93 Aligned_cols=31 Identities=13% Similarity=0.087 Sum_probs=23.3
Q ss_pred ccccHHHHHHHHHHHhcCCC---CCc-EEEecCce
Q psy15783 2 TILNLNLSKYAMWMMLQQDT---PQD-FVIATGET 32 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~~---pgd-YnI~SG~~ 32 (86)
+.+...+++++++.|+.... .|. |+|..|..
T Consensus 213 ~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~ 247 (249)
T 3f9i_A 213 TYGIPEDVAYAVAFLASNNASYITGQTLHVNGGML 247 (249)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred CCcCHHHHHHHHHHHcCCccCCccCcEEEECCCEe
Confidence 35667889999999886543 478 99988864
No 120
>3mhy_A PII-like protein PZ; PII protein, alpha-beta protein, homotrimer, signaling prote; HET: PG6 ATP AKG MES; 1.40A {Azospirillum brasilense} SCOP: d.58.5.1 PDB: 3o5t_B*
Probab=34.34 E-value=51 Score=20.34 Aligned_cols=30 Identities=13% Similarity=0.092 Sum_probs=21.9
Q ss_pred cHHHHHHHHHHHhcCCCCCc---EEEecCceee
Q psy15783 5 NLNLSKYAMWMMLQQDTPQD---FVIATGETHS 34 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgd---YnI~SG~~~S 34 (86)
.++.++++....++.++||| |+.---+.+.
T Consensus 69 ~v~~vv~~I~~~~~tg~~GdGkIfV~~v~~~~r 101 (112)
T 3mhy_A 69 QYEQVVEAIQKAANTGRIGDGKIFVLDIAQAVR 101 (112)
T ss_dssp THHHHHHHHHHHHCCSSTTCCEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCCCCCeEEEEEEhHheEE
Confidence 46778999999999999987 6554444333
No 121
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=34.12 E-value=35 Score=22.86 Aligned_cols=30 Identities=7% Similarity=0.013 Sum_probs=21.4
Q ss_pred cccHHHHHHHHHHHhcCC---CCCc-EEEecCce
Q psy15783 3 ILNLNLSKYAMWMMLQQD---TPQD-FVIATGET 32 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~ 32 (86)
++...+++++++.++... ..|. |++.+|..
T Consensus 228 ~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 261 (263)
T 3ak4_A 228 IEEPEDVADVVVFLASDAARFMTGQGINVTGGVR 261 (263)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred CcCHHHHHHHHHHHhCccccCCCCCEEEECcCEe
Confidence 567778888888887543 3576 88888754
No 122
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=34.04 E-value=31 Score=23.60 Aligned_cols=33 Identities=6% Similarity=0.009 Sum_probs=24.4
Q ss_pred ccccHHHHHHHHHHHhcCC---CCCc-EEEecCceee
Q psy15783 2 TILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHS 34 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~S 34 (86)
+++...++++++..|+... ..|. ++|..|.+.|
T Consensus 230 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~s 266 (266)
T 3uxy_A 230 RIAEPEDIADVVLFLASDAARYLCGSLVEVNGGKAVA 266 (266)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred CCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCEeCC
Confidence 3567888999988888643 3577 9998887653
No 123
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=33.68 E-value=16 Score=24.76 Aligned_cols=37 Identities=8% Similarity=0.018 Sum_probs=26.9
Q ss_pred ccccHHHHHHHHHHHhcCC--CCCc-EEEecCceeeHHHH
Q psy15783 2 TILNLNLSKYAMWMMLQQD--TPQD-FVIATGETHSVREF 38 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~--~pgd-YnI~SG~~~SV~d~ 38 (86)
++|...++++++..|+... ..|. ++|..|.+.++.++
T Consensus 215 r~~~pedvA~~v~~L~s~~~~itG~~i~vdGG~~~~l~~~ 254 (255)
T 4eso_A 215 RNGTADEVARAVLFLAFEATFTTGAKLAVDGGLGQKLSTA 254 (255)
T ss_dssp SCBCHHHHHHHHHHHHHTCTTCCSCEEEESTTTTTTBCC-
T ss_pred CCcCHHHHHHHHHHHcCcCcCccCCEEEECCCccccCcCc
Confidence 4577888999988777532 3577 99999988776543
No 124
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=32.63 E-value=42 Score=22.20 Aligned_cols=38 Identities=11% Similarity=0.169 Sum_probs=23.9
Q ss_pred HHHHHHHHhcCCCCCc-EEEecCce-eeHHHHHHHHHHHhCCce
Q psy15783 9 SKYAMWMMLQQDTPQD-FVIATGET-HSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 9 ~v~a~~~ll~~~~pgd-YnI~SG~~-~SV~d~l~~~~~~~g~~i 50 (86)
..+|+..+.++ |- +.+|||++ .+..++.+ .++..|+++
T Consensus 29 ~~~ai~~l~~~---Gi~v~l~Tgr~~r~~~~~~~-~l~~lg~~~ 68 (268)
T 3qgm_A 29 GVEGVKKLKEL---GKKIIFVSNNSTRSRRILLE-RLRSFGLEV 68 (268)
T ss_dssp HHHHHHHHHHT---TCEEEEEECCSSSCHHHHHH-HHHHTTCCC
T ss_pred HHHHHHHHHHc---CCeEEEEeCcCCCCHHHHHH-HHHHCCCCC
Confidence 46666666655 44 99999965 44555544 446667753
No 125
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=32.42 E-value=33 Score=23.52 Aligned_cols=33 Identities=9% Similarity=-0.025 Sum_probs=24.4
Q ss_pred ccccHHHHHHHHHHHhcCC---CCCc-EEEecCceee
Q psy15783 2 TILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHS 34 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~S 34 (86)
+++...+++++++.|+... ..|. ++|..|...|
T Consensus 234 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~s 270 (270)
T 3ftp_A 234 RLGSPEDIAHAVAFLASPQAGYITGTTLHVNGGMFMS 270 (270)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSCC
T ss_pred CCCCHHHHHHHHHHHhCCCcCCccCcEEEECCCcccC
Confidence 4567888999988888533 3587 9999887654
No 126
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=31.81 E-value=1e+02 Score=19.86 Aligned_cols=43 Identities=9% Similarity=0.125 Sum_probs=32.0
Q ss_pred HHHHHHHHHhcCCCCCcEEEe-----cCcee----eHHHHHHHHHHHhCCce
Q psy15783 8 LSKYAMWMMLQQDTPQDFVIA-----TGETH----SVREFVEAAFLYIGKTI 50 (86)
Q Consensus 8 ~~v~a~~~ll~~~~pgdYnI~-----SG~~~----SV~d~l~~~~~~~g~~i 50 (86)
...+.+..++++-.|...+|+ .|.+. .++.|+..+.+..++++
T Consensus 42 ~~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV 93 (150)
T 1vhx_A 42 YGLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPV 93 (150)
T ss_dssp CCHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCE
T ss_pred HHHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCE
Confidence 345677788888888779999 66542 23789988888778886
No 127
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=31.80 E-value=48 Score=21.48 Aligned_cols=31 Identities=3% Similarity=-0.085 Sum_probs=22.4
Q ss_pred cccHHHHHHHHHHHhcCC-CCCc-EEEecCcee
Q psy15783 3 ILNLNLSKYAMWMMLQQD-TPQD-FVIATGETH 33 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~-~pgd-YnI~SG~~~ 33 (86)
.+...++++++..++... ..|. |+|..|...
T Consensus 207 ~~~~~dva~~~~~l~~~~~~~G~~~~v~gG~~~ 239 (242)
T 1uay_A 207 LGRPEEYAALVLHILENPMLNGEVVRLDGALRM 239 (242)
T ss_dssp CCCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred CCCHHHHHHHHHHHhcCCCCCCcEEEEcCCeec
Confidence 467788888888888653 3577 888888654
No 128
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=31.75 E-value=56 Score=21.57 Aligned_cols=39 Identities=5% Similarity=0.183 Sum_probs=23.5
Q ss_pred HHHHHHHHhcCCCCCcEEEecCce-eeHHHHHHHHHHHhCCce
Q psy15783 9 SKYAMWMMLQQDTPQDFVIATGET-HSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 9 ~v~a~~~ll~~~~pgdYnI~SG~~-~SV~d~l~~~~~~~g~~i 50 (86)
..+|+..+.+++.+ +.+|||++ .+...+. ..++..|+++
T Consensus 27 ~~~ai~~l~~~Gi~--v~laTgrs~r~~~~~~-~~l~~lg~~~ 66 (266)
T 3pdw_A 27 ACEFVRTLKDRGVP--YLFVTNNSSRTPKQVA-DKLVSFDIPA 66 (266)
T ss_dssp HHHHHHHHHHTTCC--EEEEESCCSSCHHHHH-HHHHHTTCCC
T ss_pred HHHHHHHHHHCCCe--EEEEeCCCCCCHHHHH-HHHHHcCCCC
Confidence 45666666655332 99999965 4455544 4455667654
No 129
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=31.60 E-value=34 Score=22.40 Aligned_cols=30 Identities=10% Similarity=0.204 Sum_probs=21.1
Q ss_pred cccHHHHHHHHHHHhcCC---CCCc-EEEecCce
Q psy15783 3 ILNLNLSKYAMWMMLQQD---TPQD-FVIATGET 32 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~ 32 (86)
.+.+.+++++++.++... ..|. +++..|..
T Consensus 209 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~ 242 (244)
T 1cyd_A 209 FAEVEDVVNSILFLLSDRSASTSGGGILVDAGYL 242 (244)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTGG
T ss_pred CCCHHHHHHHHHHHhCchhhcccCCEEEECCCcc
Confidence 467788888888888653 2466 77777754
No 130
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=31.49 E-value=8.2 Score=25.58 Aligned_cols=30 Identities=10% Similarity=-0.005 Sum_probs=22.3
Q ss_pred cccHHHHHHHHHHHhcCC----CCCc-EEEecCce
Q psy15783 3 ILNLNLSKYAMWMMLQQD----TPQD-FVIATGET 32 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~----~pgd-YnI~SG~~ 32 (86)
.+.+.++++++..++... ..|. |+|++|..
T Consensus 222 ~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~~ 256 (258)
T 3afn_B 222 FGTAEEMAPAFLFFASHLASGYITGQVLDINGGQY 256 (258)
T ss_dssp CBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTSS
T ss_pred CCCHHHHHHHHHHHhCcchhccccCCEEeECCCcc
Confidence 567788888888888653 3577 99988863
No 131
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=31.40 E-value=35 Score=22.67 Aligned_cols=30 Identities=3% Similarity=0.037 Sum_probs=21.8
Q ss_pred ccHHHHHHHHHHHhcCCCCCc-EEEecCcee
Q psy15783 4 LNLNLSKYAMWMMLQQDTPQD-FVIATGETH 33 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~pgd-YnI~SG~~~ 33 (86)
+...+++++++.++.....|. |++..|...
T Consensus 212 ~~~~dvA~~i~~~~~~~~~G~~~~v~gG~~~ 242 (254)
T 1sby_A 212 QTSEQCGQNFVKAIEANKNGAIWKLDLGTLE 242 (254)
T ss_dssp EEHHHHHHHHHHHHHHCCTTCEEEEETTEEE
T ss_pred CCHHHHHHHHHHHHHcCCCCCEEEEeCCcee
Confidence 456678888887777666787 888888543
No 132
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=31.10 E-value=37 Score=22.74 Aligned_cols=24 Identities=17% Similarity=0.069 Sum_probs=14.4
Q ss_pred HHHHHHhcCCCCCc-EEEecCceee
Q psy15783 11 YAMWMMLQQDTPQD-FVIATGETHS 34 (86)
Q Consensus 11 ~a~~~ll~~~~pgd-YnI~SG~~~S 34 (86)
.....++++-..|- +.|||||+++
T Consensus 22 ~~~~~~l~~~~~gi~v~iaTGR~~~ 46 (244)
T 1s2o_A 22 EHLQEYLGDRRGNFYLAYATGRSYH 46 (244)
T ss_dssp HHHHHHHHTTGGGEEEEEECSSCHH
T ss_pred HHHHHHHHHhcCCCEEEEEcCCCHH
Confidence 34444443323355 9999999753
No 133
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=30.52 E-value=37 Score=22.98 Aligned_cols=34 Identities=12% Similarity=0.031 Sum_probs=26.3
Q ss_pred ccccHHHHHHHHHHHhcCC---CCCc-EEEecCceeeH
Q psy15783 2 TILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHSV 35 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~SV 35 (86)
++|...+++++++.|+... ..|. ++|..|...|+
T Consensus 229 r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~si 266 (267)
T 3t4x_A 229 RLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRSV 266 (267)
T ss_dssp SCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCSC
T ss_pred CccCHHHHHHHHHHHcCccccCccCCeEEECCCccccc
Confidence 4677889999998888643 3588 99999987764
No 134
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=29.95 E-value=40 Score=21.99 Aligned_cols=29 Identities=7% Similarity=0.054 Sum_probs=20.9
Q ss_pred cccHHHHHHHHHHHhcCC---CCCc-EEEecCc
Q psy15783 3 ILNLNLSKYAMWMMLQQD---TPQD-FVIATGE 31 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~ 31 (86)
.+.+.++++++..++... ..|. |++++|.
T Consensus 210 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 242 (245)
T 2ph3_A 210 FGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL 242 (245)
T ss_dssp CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred CcCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence 457788888888888643 2477 8888775
No 135
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=29.82 E-value=59 Score=21.15 Aligned_cols=29 Identities=3% Similarity=-0.011 Sum_probs=21.2
Q ss_pred cccHHHHHHHHHHHhcCC---CCCc-EEEecCc
Q psy15783 3 ILNLNLSKYAMWMMLQQD---TPQD-FVIATGE 31 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~ 31 (86)
.+.+.++++++..++... ..|. |++++|.
T Consensus 215 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 247 (248)
T 2pnf_A 215 FGSPEEVANVVLFLCSELASYITGEVIHVNGGM 247 (248)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ccCHHHHHHHHHHHhCchhhcCCCcEEEeCCCc
Confidence 467788888888888542 3577 8888874
No 136
>3ncq_A Nitrogen regulatory protein P-II (GLNB-2); PII signaling, nucleotide binding, GLNK, signaling Pro; HET: ATP; 1.24A {Archaeoglobus fulgidus} SCOP: d.58.5.0 PDB: 3ncp_A* 3ncr_A*
Probab=29.67 E-value=64 Score=20.29 Aligned_cols=31 Identities=13% Similarity=0.152 Sum_probs=22.5
Q ss_pred cHHHHHHHHHHHhcCCCCCc---EEEecCceeeH
Q psy15783 5 NLNLSKYAMWMMLQQDTPQD---FVIATGETHSV 35 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgd---YnI~SG~~~SV 35 (86)
.|+.++++....++.++||| |+.---+.+.|
T Consensus 69 ~ve~vv~~I~~~a~TG~~GDGkIFV~~Ve~~vrI 102 (119)
T 3ncq_A 69 AVEEVIGLIVNSAFTGSPGDGKIFIIPVEDVVRI 102 (119)
T ss_dssp GHHHHHHHHHHHHCCSSTTCCEEEEEECSEEEET
T ss_pred HHHHHHHHHHHHhcCCCCCCCEEEEEEhHheEEe
Confidence 46779999999999999987 55544444443
No 137
>4ar0_A Type IV pilus biogenesis and competence protein P; transport, secretin type II secretion system; NMR {Neisseria meningitidis}
Probab=29.19 E-value=67 Score=20.39 Aligned_cols=18 Identities=22% Similarity=0.272 Sum_probs=15.8
Q ss_pred eHHHHHHHHHHHhCCceE
Q psy15783 34 SVREFVEAAFLYIGKTIV 51 (86)
Q Consensus 34 SV~d~l~~~~~~~g~~i~ 51 (86)
.+++++..+.+.+|+.+-
T Consensus 42 ~i~~vl~~la~~tg~NiV 59 (128)
T 4ar0_A 42 EIRTILQILAKESGMNIV 59 (128)
T ss_dssp EHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHHHHCCcEE
Confidence 489999999999999763
No 138
>3l7p_A Putative nitrogen regulatory protein PII; SMU_1 transcription, transcription regulation; 2.00A {Streptococcus mutans} SCOP: d.58.5.1
Probab=28.76 E-value=59 Score=20.26 Aligned_cols=32 Identities=16% Similarity=0.159 Sum_probs=19.3
Q ss_pred cHHHHHHHHHHHhcCCCCCc---EEEecCceeeHH
Q psy15783 5 NLNLSKYAMWMMLQQDTPQD---FVIATGETHSVR 36 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgd---YnI~SG~~~SV~ 36 (86)
.++.++++....++.++||| |+.---+.+.+|
T Consensus 72 ~ve~vv~~I~~~a~tg~~GDGkIFV~~ve~~vrIr 106 (115)
T 3l7p_A 72 AVEEMITTISQAVKTGEVGDGKIFVSPVDEIVRIR 106 (115)
T ss_dssp GHHHHHHHHHHHHCCC----CEEEEEECSEEEEC-
T ss_pred HHHHHHHHHHHHhcCCCCCCcEEEEEEhHheEEec
Confidence 46778999999999999987 665544444443
No 139
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=28.75 E-value=38 Score=22.58 Aligned_cols=34 Identities=12% Similarity=0.048 Sum_probs=22.5
Q ss_pred cccHHHHHHHHHHHhcCC---CCCc-EEEecCceeeHH
Q psy15783 3 ILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHSVR 36 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~SV~ 36 (86)
++...++++++..|+... ..|. ++|..|...+.+
T Consensus 222 ~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~~~ 259 (261)
T 3n74_A 222 LLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIGGR 259 (261)
T ss_dssp CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC---
T ss_pred CcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccCCC
Confidence 456778888888777432 3577 888888877654
No 140
>3t9z_A GLNK3, nitrogen regulatory protein P-II (GLNB-3); PII-family, AMT3, signaling protein; HET: FLC; 1.82A {Archaeoglobus fulgidus} SCOP: d.58.5.0 PDB: 3ta0_A* 3ta1_A* 3ta2_A* 3o8w_A
Probab=28.71 E-value=70 Score=20.08 Aligned_cols=31 Identities=16% Similarity=0.144 Sum_probs=22.0
Q ss_pred cHHHHHHHHHHHhcCCCCCc---EEEecCceeeH
Q psy15783 5 NLNLSKYAMWMMLQQDTPQD---FVIATGETHSV 35 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgd---YnI~SG~~~SV 35 (86)
.++.++++....++.++||| |+.---+.+.|
T Consensus 69 ~ve~Vv~~I~~~a~TG~~GDGkIFV~~Ve~~vrI 102 (118)
T 3t9z_A 69 AVDEVVEAIVSSARTGKFGDGRIFVIPVEKSVKI 102 (118)
T ss_dssp GHHHHHHHHHHHHCCSSTTCCEEEEEECCEEEET
T ss_pred HHHHHHHHHHHHhcCCCCCCeEEEEEEhHHeEEe
Confidence 46778999999999999987 55544443333
No 141
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=27.76 E-value=70 Score=21.01 Aligned_cols=30 Identities=7% Similarity=0.012 Sum_probs=22.3
Q ss_pred cccHHHHHHHHHHHhcCC---CCCc-EEEecCce
Q psy15783 3 ILNLNLSKYAMWMMLQQD---TPQD-FVIATGET 32 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~ 32 (86)
.+...++++++..++... ..|. |++++|..
T Consensus 225 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~ 258 (260)
T 3awd_A 225 VGQPDEVASVVQFLASDAASLMTGAIVNVDAGFT 258 (260)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CCCHHHHHHHHHHHhCchhccCCCcEEEECCcee
Confidence 567888899988888542 3577 89988854
No 142
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=27.08 E-value=1.1e+02 Score=18.49 Aligned_cols=46 Identities=17% Similarity=0.156 Sum_probs=33.2
Q ss_pred cHHHHHHHHHHHhcCCCCCcEEEe-----cCc----eeeHHHHHHHHHHHhCCceE
Q psy15783 5 NLNLSKYAMWMMLQQDTPQDFVIA-----TGE----THSVREFVEAAFLYIGKTIV 51 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgdYnI~-----SG~----~~SV~d~l~~~~~~~g~~i~ 51 (86)
+.+........++++-.+...+|+ .|. +..++.|.+.+.+. ++++.
T Consensus 35 ~~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~-~lpV~ 89 (98)
T 1iv0_A 35 TLEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRAR-GVEVE 89 (98)
T ss_dssp CHHHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHT-TCEEE
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcC-CCCEE
Confidence 344556677777777778779998 443 34588999999887 88763
No 143
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=27.07 E-value=30 Score=22.59 Aligned_cols=24 Identities=8% Similarity=-0.003 Sum_probs=15.4
Q ss_pred ccHHHHHHHHHHHhcCCCCCc-EEE
Q psy15783 4 LNLNLSKYAMWMMLQQDTPQD-FVI 27 (86)
Q Consensus 4 gn~~~~v~a~~~ll~~~~pgd-YnI 27 (86)
+.+.+++++++.++.++.++. |++
T Consensus 201 ~~~~dva~~~~~~~~~~~~~~~~~~ 225 (242)
T 2bka_A 201 VPVVTVVRAMLNNVVRPRDKQMELL 225 (242)
T ss_dssp EEHHHHHHHHHHHHTSCCCSSEEEE
T ss_pred cCHHHHHHHHHHHHhCccccCeeEe
Confidence 456677777777777666544 444
No 144
>4aff_A Nitrogen regulatory protein P-II; signaling protein; HET: ATP FLC; 1.05A {Synechococcus elongatus} SCOP: d.58.5.1 PDB: 2xun_A* 2xul_A* 2xzw_A* 2xbp_A* 2v5h_G* 2jj4_D* 2xg8_A 1qy7_A 3n5b_A* 1ul3_A
Probab=26.66 E-value=65 Score=20.11 Aligned_cols=29 Identities=14% Similarity=0.114 Sum_probs=21.4
Q ss_pred cHHHHHHHHHHHhcCCCCCc---EEEecCcee
Q psy15783 5 NLNLSKYAMWMMLQQDTPQD---FVIATGETH 33 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgd---YnI~SG~~~ 33 (86)
.++.++++....++.++||| |+.---+.+
T Consensus 69 ~ve~vv~~I~~~a~Tg~~GDGkIFV~~Ve~~v 100 (116)
T 4aff_A 69 QVDTVIDKIVAAARTGENGDGKIFVSPVDQTI 100 (116)
T ss_dssp GHHHHHHHHHHHHCCSSTTCEEEEEEECSCCB
T ss_pred HHHHHHHHHHHHhcCCCCCCeEEEEEEhHHeE
Confidence 46778999999999999997 555433333
No 145
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=26.17 E-value=52 Score=21.94 Aligned_cols=30 Identities=3% Similarity=0.005 Sum_probs=19.4
Q ss_pred cccHHHHHHHHHHHhcCC---CCCc-EEEecCce
Q psy15783 3 ILNLNLSKYAMWMMLQQD---TPQD-FVIATGET 32 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~ 32 (86)
.+...++++++..++... ..|. |++..|..
T Consensus 220 ~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~ 253 (255)
T 2q2v_A 220 FVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGWL 253 (255)
T ss_dssp CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred CcCHHHHHHHHHHHhCCccCCCCCCEEEECCCcc
Confidence 456777777777776532 2466 77777753
No 146
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=25.98 E-value=71 Score=21.53 Aligned_cols=33 Identities=3% Similarity=0.127 Sum_probs=24.9
Q ss_pred ccccHHHHHHHHHHHhcCC---CCCc-EEEecCceee
Q psy15783 2 TILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHS 34 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~S 34 (86)
+++...++++++..|+... ..|. ++|..|.+..
T Consensus 213 r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~~~ 249 (258)
T 3oid_A 213 RMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSLL 249 (258)
T ss_dssp SCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGGGB
T ss_pred CCcCHHHHHHHHHHHhCcccCCccCCEEEECCCccCC
Confidence 4678888999998888654 3577 9999887543
No 147
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=25.92 E-value=46 Score=22.61 Aligned_cols=33 Identities=6% Similarity=0.086 Sum_probs=24.7
Q ss_pred ccccHHHHHHHHHHHhcCC-CCCc-EEEecCceee
Q psy15783 2 TILNLNLSKYAMWMMLQQD-TPQD-FVIATGETHS 34 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~-~pgd-YnI~SG~~~S 34 (86)
++|...+++++++.|++.. ..|. |+|..|.+.+
T Consensus 224 r~~~~edva~~v~~L~~~~~itG~~i~vdGG~~~~ 258 (260)
T 3gem_A 224 IEPGAEVIYQSLRYLLDSTYVTGTTLTVNGGRHVK 258 (260)
T ss_dssp CCCCTHHHHHHHHHHHHCSSCCSCEEEESTTTTTC
T ss_pred CCCCHHHHHHHHHHHhhCCCCCCCEEEECCCcccC
Confidence 4567888999988888543 3577 9999987654
No 148
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=25.67 E-value=89 Score=20.54 Aligned_cols=33 Identities=6% Similarity=-0.021 Sum_probs=21.5
Q ss_pred cccHHHHHHHHHHHhcCC---CCCc-EEEecCceeeH
Q psy15783 3 ILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHSV 35 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~SV 35 (86)
.+...++++++..++... ..|. |++..|...+.
T Consensus 223 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~ 259 (264)
T 2pd6_A 223 LGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAE 259 (264)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC----
T ss_pred CCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceecc
Confidence 467788888888888542 3577 88888876543
No 149
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=25.59 E-value=50 Score=22.68 Aligned_cols=34 Identities=9% Similarity=0.087 Sum_probs=25.8
Q ss_pred ccccHHHHHHHHHHHhcCC---CCCc-EEEecCceeeH
Q psy15783 2 TILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHSV 35 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~SV 35 (86)
++|...++++++..|+... ..|. +++..|.+.+.
T Consensus 236 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~ 273 (277)
T 4dqx_A 236 RMGTAEEIAEAMLFLASDRSRFATGSILTVDGGSSIGN 273 (277)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSSCC
T ss_pred CCcCHHHHHHHHHHHhCCccCCCcCCEEEECCchhhhh
Confidence 4677888999998888543 3588 99999987653
No 150
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=24.34 E-value=65 Score=21.27 Aligned_cols=25 Identities=4% Similarity=0.066 Sum_probs=18.4
Q ss_pred cccHHHHHHHHHHHhcCCCCCc-EEE
Q psy15783 3 ILNLNLSKYAMWMMLQQDTPQD-FVI 27 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~~pgd-YnI 27 (86)
.+...+++++++.++.++..+. ||+
T Consensus 200 ~~~p~dvA~~i~~l~~~~~~~~~~~i 225 (245)
T 3e9n_A 200 YIEPKEIANAIRFVIDAGETTQITNV 225 (245)
T ss_dssp GSCHHHHHHHHHHHHTSCTTEEEEEE
T ss_pred CCCHHHHHHHHHHHHcCCCccceeee
Confidence 3566778888888888777666 665
No 151
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=24.05 E-value=52 Score=22.07 Aligned_cols=32 Identities=3% Similarity=-0.007 Sum_probs=23.9
Q ss_pred cccHHHHHHHHHHHhcCC---CCCc-EEEecCceee
Q psy15783 3 ILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHS 34 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~S 34 (86)
++...++++++..++... ..|. |++..|.+.+
T Consensus 222 ~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~ 257 (265)
T 1qsg_A 222 TVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA 257 (265)
T ss_dssp CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred CCCHHHHHHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence 567888999988888543 2577 9999997654
No 152
>1hwu_A PII protein; herbaspirillum seropedicae PII, beta-alpha-beta motif, signal transduction protein, signaling protein; 2.10A {Herbaspirillum seropedicae} SCOP: d.58.5.1
Probab=23.94 E-value=97 Score=18.68 Aligned_cols=29 Identities=14% Similarity=0.063 Sum_probs=20.6
Q ss_pred cHHHHHHHHHHHhcCCCCCc---EEEecCcee
Q psy15783 5 NLNLSKYAMWMMLQQDTPQD---FVIATGETH 33 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgd---YnI~SG~~~ 33 (86)
.++.++++....++.++||| |+.---+.+
T Consensus 69 ~v~~vv~~I~~~~~tg~~GdGkiFV~~V~~~~ 100 (112)
T 1hwu_A 69 VVEQAVDAIIKAARTGKIGDGKIFVQEVEQVI 100 (112)
T ss_dssp GHHHHHHHHHHHHCCSSTTCCEEEEEECSEEE
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEEEEhHHEE
Confidence 36778999999999999876 554433333
No 153
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=23.79 E-value=98 Score=22.50 Aligned_cols=33 Identities=21% Similarity=0.193 Sum_probs=28.2
Q ss_pred CCCCcEEEecC--------ceeeHHHHHHHHHHHhCCceEe
Q psy15783 20 DTPQDFVIATG--------ETHSVREFVEAAFLYIGKTIVW 52 (86)
Q Consensus 20 ~~pgdYnI~SG--------~~~SV~d~l~~~~~~~g~~i~w 52 (86)
++||-.+|+|| ...++..-+.++.+.-+.+++|
T Consensus 124 G~~G~VkIsTGp~Ss~~~~~~V~vetAiaml~dmG~~SvKf 164 (249)
T 3m0z_A 124 GTPGMVKISTGPLSSGAADGIVPLETAIALLKDMGGSSIKY 164 (249)
T ss_dssp SSTTEEECCCSTTGGGSSCCEEEHHHHHHHHHHTTCCEEEE
T ss_pred CccceEEeccCccccCCCCceeeHHHHHHHHHHcCCCeeeE
Confidence 57888999999 7999999999888888777764
No 154
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=23.22 E-value=81 Score=21.25 Aligned_cols=32 Identities=6% Similarity=0.009 Sum_probs=23.1
Q ss_pred cccHHHHHHHHHHHhcCCC-CCc-EEEecCceee
Q psy15783 3 ILNLNLSKYAMWMMLQQDT-PQD-FVIATGETHS 34 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~~-pgd-YnI~SG~~~S 34 (86)
++...++++++..++.... .|. +++..|...+
T Consensus 246 ~~~pedvA~~v~~l~s~~~~tG~~i~vdGG~~~~ 279 (281)
T 3ppi_A 246 LGTPDEFADAAAFLLTNGYINGEVMRLDGAQRFT 279 (281)
T ss_dssp CBCHHHHHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred CCCHHHHHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence 4667888888888886543 577 8888887653
No 155
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=23.11 E-value=1.2e+02 Score=19.46 Aligned_cols=40 Identities=13% Similarity=0.180 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhcCCCCCcEEEecCceeeHHHHHHHHHHHhCCce
Q psy15783 7 NLSKYAMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTI 50 (86)
Q Consensus 7 ~~~v~a~~~ll~~~~pgdYnI~SG~~~SV~d~l~~~~~~~g~~i 50 (86)
.-+++||-+. +..+.++|.||.+ -....++.+.+..|..+
T Consensus 97 ~laiD~~~~a---~~~d~~vLvSgD~-DF~plv~~lr~~~G~~V 136 (165)
T 2qip_A 97 GITLDAIEIA---PDVDRVILVSGDG-DFSLLVERIQQRYNKKV 136 (165)
T ss_dssp HHHHHHHHHG---GGCSEEEEECCCG-GGHHHHHHHHHHHCCEE
T ss_pred HHHHHHHHhh---ccCCEEEEEECCh-hHHHHHHHHHHHcCcEE
Confidence 3467777653 4455599999988 44445555555457765
No 156
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=22.76 E-value=54 Score=22.42 Aligned_cols=33 Identities=6% Similarity=-0.090 Sum_probs=24.3
Q ss_pred ccccHHHHHHHHHHHhcCC---CCCc-EEEecCceee
Q psy15783 2 TILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHS 34 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~S 34 (86)
+++...++++++..|+... ..|. ++|..|...|
T Consensus 237 r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG~~~s 273 (273)
T 3uf0_A 237 RWATPEDMVGPAVFLASDAASYVHGQVLAVDGGWLAS 273 (273)
T ss_dssp SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred CCCCHHHHHHHHHHHhCchhcCCcCCEEEECcCccCC
Confidence 3567788899988888643 3587 9999987654
No 157
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=22.39 E-value=1e+02 Score=19.79 Aligned_cols=39 Identities=10% Similarity=0.078 Sum_probs=24.3
Q ss_pred HHHHHHHHhcCCCCCc-EEEecCcee-eHHHHHHHHHHHhCCceE
Q psy15783 9 SKYAMWMMLQQDTPQD-FVIATGETH-SVREFVEAAFLYIGKTIV 51 (86)
Q Consensus 9 ~v~a~~~ll~~~~pgd-YnI~SG~~~-SV~d~l~~~~~~~g~~i~ 51 (86)
+++|+-.+-++ |- ++||||++- .+.+.++. ++..|++..
T Consensus 29 ~~~al~~l~~~---G~~iii~TgR~~~~~~~~~~~-l~~~gi~~~ 69 (142)
T 2obb_A 29 AVETLKLLQQE---KHRLILWSVREGELLDEAIEW-CRARGLEFY 69 (142)
T ss_dssp HHHHHHHHHHT---TCEEEECCSCCHHHHHHHHHH-HHTTTCCCS
T ss_pred HHHHHHHHHHC---CCEEEEEeCCCcccHHHHHHH-HHHcCCCeE
Confidence 45666555444 55 999999974 44444444 666777643
No 158
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=21.99 E-value=93 Score=20.69 Aligned_cols=34 Identities=0% Similarity=-0.141 Sum_probs=23.0
Q ss_pred ccccHHHHHHHHHHHhcCC-CCCc-EEEecCceeeH
Q psy15783 2 TILNLNLSKYAMWMMLQQD-TPQD-FVIATGETHSV 35 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~-~pgd-YnI~SG~~~SV 35 (86)
++|...++++++..|+... ..|. ++|..|...+.
T Consensus 221 r~~~~~dva~~v~~l~s~~~itG~~i~vdGG~~~~~ 256 (257)
T 3tpc_A 221 RLGRAEEYAALVKHICENTMLNGEVIRLDGALRMAP 256 (257)
T ss_dssp SCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC--
T ss_pred CCCCHHHHHHHHHHHcccCCcCCcEEEECCCccCCC
Confidence 4567788888888777643 3577 88888876553
No 159
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=21.68 E-value=1.1e+02 Score=19.58 Aligned_cols=45 Identities=13% Similarity=0.263 Sum_probs=32.8
Q ss_pred HHHHHHHhcCCCCCcEEEe-----cCcee----eHHHHHHHHHHHhCCceEeec
Q psy15783 10 KYAMWMMLQQDTPQDFVIA-----TGETH----SVREFVEAAFLYIGKTIVWEG 54 (86)
Q Consensus 10 v~a~~~ll~~~~pgdYnI~-----SG~~~----SV~d~l~~~~~~~g~~i~w~g 54 (86)
......++++-.|...+|+ .|... .++.|.+.+.+..++++.|-.
T Consensus 42 ~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~D 95 (138)
T 1nu0_A 42 WNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHD 95 (138)
T ss_dssp HHHHHHHHHHHCCSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEc
Confidence 4455666666678779999 66554 568999999888899887533
No 160
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=21.65 E-value=63 Score=21.49 Aligned_cols=33 Identities=3% Similarity=-0.140 Sum_probs=24.2
Q ss_pred cccHHHHHHHHHHHhcCC---CCCc-EEEecCceeeH
Q psy15783 3 ILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHSV 35 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~SV 35 (86)
++...+++++++.++... ..|. |++..|.+...
T Consensus 219 ~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~~~~ 255 (264)
T 3i4f_A 219 SGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDVIH 255 (264)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCCCCC
T ss_pred CcCHHHHHHHHHHHcCcccCCCCCcEEEEcCceeecc
Confidence 567788899988888643 3577 88888876544
No 161
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=21.55 E-value=61 Score=22.07 Aligned_cols=33 Identities=6% Similarity=-0.020 Sum_probs=24.2
Q ss_pred ccccHHHHHHHHHHHhcCC---CCCc-EEEecCceee
Q psy15783 2 TILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHS 34 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~S 34 (86)
++|...++++++..|+... ..|. ++|..|...+
T Consensus 220 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 256 (269)
T 3vtz_A 220 RIGRPEEVAEVVAFLASDRSSFITGACLTVDGGLLSK 256 (269)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred CCcCHHHHHHHHHHHhCCccCCCcCcEEEECCCcccc
Confidence 3567888899888888543 3577 9999887543
No 162
>1e9r_A Conjugal transfer protein TRWB; coupling protein, bacterial conjugation, F1-ATPase-like quaternary structure, ring helicases; 2.4A {Escherichia coli} SCOP: c.37.1.11 PDB: 1e9s_A 1gki_A* 1gl7_A* 1gl6_A*
Probab=21.33 E-value=36 Score=24.88 Aligned_cols=21 Identities=29% Similarity=0.407 Sum_probs=16.8
Q ss_pred EEEe---cCceeeHHHHHHHHHHH
Q psy15783 25 FVIA---TGETHSVREFVEAAFLY 45 (86)
Q Consensus 25 YnI~---SG~~~SV~d~l~~~~~~ 45 (86)
.++| |||+..++.++..+++.
T Consensus 57 ~i~G~tGsGKs~~~~~li~~~~~~ 80 (437)
T 1e9r_A 57 LVNGATGTGKSVLLRELAYTGLLR 80 (437)
T ss_dssp EEEECTTSSHHHHHHHHHHHHHHT
T ss_pred EEECCCCCCHHHHHHHHHHHHHHC
Confidence 5665 89999998888888763
No 163
>2d48_A Interleukin-4; four helix bundle, cytokine; 1.65A {Homo sapiens} PDB: 1itl_A 1itm_A 2b90_A 1cyl_A 1hik_A 1iar_A 1rcb_A 2b8u_A 2cyk_A 2int_A 3bpl_A* 3bpn_A* 2b8y_A 1hij_A 1hzi_A 2b8z_A 1bbn_A 1bcn_A 1iti_A 2b8x_A ...
Probab=21.19 E-value=1.8e+02 Score=19.05 Aligned_cols=39 Identities=10% Similarity=0.221 Sum_probs=27.7
Q ss_pred cHHHHHHHHHHHhcCCCCCcEEEecCceeeHHHHHHHHHHHh
Q psy15783 5 NLNLSKYAMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYI 46 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgdYnI~SG~~~SV~d~l~~~~~~~ 46 (86)
.+.-.-+.++-|+.+.. .-+...+..+++||++.+-..+
T Consensus 82 ~L~~L~RnL~sla~~~s---C~vne~~~ttLkDFLerLK~im 120 (129)
T 2d48_A 82 FLKRLDRNLWGLAGLNS---CPVKEANQSTLENFLERLKTIM 120 (129)
T ss_dssp HHHHHHHHHHHHHCCSC---CCCCCCCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCC---CCCCcchhhHHHHHHHHHHHHH
Confidence 45556788888886321 3356778899999999886654
No 164
>1vfj_A Nitrogen regulatory protein P-II; structural genomics, signal transducing protein, riken structural genomics/proteomics initiative, RSGI; 1.70A {Thermus thermophilus} SCOP: d.58.5.1 PDB: 1ufl_A 1v3s_A* 1v9o_A* 1v3r_A
Probab=20.92 E-value=1.2e+02 Score=18.41 Aligned_cols=20 Identities=10% Similarity=-0.021 Sum_probs=16.7
Q ss_pred cHHHHHHHHHHHhcCCCCCc
Q psy15783 5 NLNLSKYAMWMMLQQDTPQD 24 (86)
Q Consensus 5 n~~~~v~a~~~ll~~~~pgd 24 (86)
.++.+++++...++.++|||
T Consensus 69 ~v~~vv~~I~~~~~tg~~Gd 88 (116)
T 1vfj_A 69 FVKPTVEAILKAARTGEVGD 88 (116)
T ss_dssp GHHHHHHHHHHHHCCSSTTC
T ss_pred HHHHHHHHHHHHhcCCCCCC
Confidence 46778999999999888876
No 165
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=20.68 E-value=59 Score=22.34 Aligned_cols=33 Identities=9% Similarity=0.065 Sum_probs=25.1
Q ss_pred ccccHHHHHHHHHHHhcCC---CCCc-EEEecCceee
Q psy15783 2 TILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHS 34 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~S 34 (86)
++|...+++++++.|+... ..|. ++|..|...+
T Consensus 239 r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~ 275 (277)
T 3gvc_A 239 RMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTIAA 275 (277)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred CCCCHHHHHHHHHHHcCCccCCccCcEEEECCcchhc
Confidence 4678888999998888543 3577 9999987654
No 166
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=20.59 E-value=80 Score=21.69 Aligned_cols=33 Identities=9% Similarity=0.057 Sum_probs=26.0
Q ss_pred ccccHHHHHHHHHHHhcCC---CCCc-EEEecCceee
Q psy15783 2 TILNLNLSKYAMWMMLQQD---TPQD-FVIATGETHS 34 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~S 34 (86)
+++...+++++++.|+... ..|. ++|..|.+.+
T Consensus 220 r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~ 256 (280)
T 3tox_A 220 RIARPEEIAEAALYLASDGASFVTGAALLADGGASVT 256 (280)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred CCcCHHHHHHHHHHHhCccccCCcCcEEEECCCcccc
Confidence 4678889999999888654 3588 9999997765
No 167
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=20.45 E-value=94 Score=21.06 Aligned_cols=29 Identities=3% Similarity=0.025 Sum_probs=20.0
Q ss_pred cccHHHHHHHHHHHhcCC---CCCc-EEEecCc
Q psy15783 3 ILNLNLSKYAMWMMLQQD---TPQD-FVIATGE 31 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~ 31 (86)
++...+++++++.++... ..|. |+++.|.
T Consensus 242 ~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~ 274 (277)
T 2rhc_B 242 YVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL 274 (277)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence 456777888887777543 3566 8887774
No 168
>1ybx_A Conserved hypothetical protein; ST genomics, PSI, protein structure initiative, southeast COLL for structural genomics, secsg; HET: MSE; 1.80A {Clostridium thermocellum}
Probab=20.36 E-value=37 Score=22.55 Aligned_cols=20 Identities=10% Similarity=0.310 Sum_probs=15.4
Q ss_pred ccCCcE-EEEEcCCCcCCCCC
Q psy15783 64 KDTGIV-RVKVNENYFRPTEV 83 (86)
Q Consensus 64 ~~~~~~-~v~iDp~~~RP~dv 83 (86)
+.++++ .|+|||+.++|.|+
T Consensus 83 nG~~ev~~I~Idp~lldpeD~ 103 (143)
T 1ybx_A 83 TGRKDIKEITIKPEVVDPDDV 103 (143)
T ss_dssp ETTCCEEEEEECGGGCCTTCH
T ss_pred ecCceEEEEEECHHHcCCcCH
Confidence 445555 89999999999775
No 169
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=20.18 E-value=97 Score=20.41 Aligned_cols=32 Identities=6% Similarity=0.041 Sum_probs=23.3
Q ss_pred ccccHHHHHHHHHHHhcCC---CCCc-EEEecCcee
Q psy15783 2 TILNLNLSKYAMWMMLQQD---TPQD-FVIATGETH 33 (86)
Q Consensus 2 ~~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~~ 33 (86)
+++...++++++..|+... ..|. |++..|...
T Consensus 220 ~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~~ 255 (256)
T 3ezl_A 220 RLGSPDEIGSIVAWLASEESGFSTGADFSLNGGLHM 255 (256)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred CCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCEeC
Confidence 3567888999988888533 3577 999888653
No 170
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=20.10 E-value=73 Score=21.04 Aligned_cols=30 Identities=17% Similarity=0.109 Sum_probs=21.3
Q ss_pred cccHHHHHHHHHHHhcCC---CCCc-EEEecCce
Q psy15783 3 ILNLNLSKYAMWMMLQQD---TPQD-FVIATGET 32 (86)
Q Consensus 3 ~gn~~~~v~a~~~ll~~~---~pgd-YnI~SG~~ 32 (86)
++...+++++++.|+... ..|. +++..|.+
T Consensus 209 ~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~ 242 (244)
T 4e4y_A 209 IAQPQEIAELVIFLLSDKSKFMTGGLIPIDGGYT 242 (244)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CcCHHHHHHHHHHHhcCccccccCCeEeECCCcc
Confidence 567788888888888543 3477 88877754
Done!