Your job contains 1 sequence.
>psy15783
MTILNLNLSKYAMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEV
GKEKDTGIVRVKVNENYFRPTEVIGT
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15783
(86 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0031661 - symbol:Gmd "GDP-mannose 4,6-dehydratase"... 276 4.2e-24 1
UNIPROTKB|F6Z8R0 - symbol:GMDS "Uncharacterized protein" ... 274 6.8e-24 1
UNIPROTKB|F1P299 - symbol:GMDS "Uncharacterized protein" ... 267 3.8e-23 1
UNIPROTKB|E9PI88 - symbol:GMDS "GDP-mannose 4,6 dehydrata... 267 3.8e-23 1
UNIPROTKB|O60547 - symbol:GMDS "GDP-mannose 4,6 dehydrata... 267 3.8e-23 1
UNIPROTKB|F6W683 - symbol:GMDS "Uncharacterized protein" ... 267 3.8e-23 1
UNIPROTKB|F7EWI9 - symbol:GMDS "Uncharacterized protein" ... 267 3.8e-23 1
UNIPROTKB|Q6P621 - symbol:gmds "GDP-mannose 4,6-dehydrata... 267 3.8e-23 1
UNIPROTKB|E2RC02 - symbol:GMDS "Uncharacterized protein" ... 266 4.8e-23 1
UNIPROTKB|F6W0W9 - symbol:GMDS "GDP-mannose 4,6 dehydrata... 265 6.1e-23 1
MGI|MGI:1891112 - symbol:Gmds "GDP-mannose 4, 6-dehydrata... 265 6.1e-23 1
UNIPROTKB|B5XE59 - symbol:GMDS "GDP-mannose 4,6 dehydrata... 264 7.8e-23 1
UNIPROTKB|Q8K3X3 - symbol:GMDS "GDP-mannose 4,6 dehydrata... 264 7.8e-23 1
RGD|1311008 - symbol:Gmds "GDP-mannose 4, 6-dehydratase" ... 264 7.8e-23 1
UNIPROTKB|F1RX12 - symbol:GMDS "Uncharacterized protein" ... 263 1.0e-22 1
ZFIN|ZDB-GENE-050419-45 - symbol:gmds "GDP-mannose 4,6-de... 263 1.0e-22 1
UNIPROTKB|Q8AVI1 - symbol:gmds "Gmds-prov protein" specie... 260 2.1e-22 1
WB|WBGene00010166 - symbol:gmd-2 species:6239 "Caenorhabd... 247 7.0e-21 1
UNIPROTKB|O45583 - symbol:gmd-2 "GDP-mannose 4,6 dehydrat... 247 7.0e-21 1
WB|WBGene00000266 - symbol:bre-1 species:6239 "Caenorhabd... 232 4.8e-19 1
UNIPROTKB|Q18801 - symbol:bre-1 "GDP-mannose 4,6 dehydrat... 232 4.8e-19 1
DICTYBASE|DDB_G0284553 - symbol:gmd "GDP-mannose dehydrat... 223 2.7e-18 1
TIGR_CMR|GSU_0626 - symbol:GSU_0626 "GDP-mannose 4,6-dehy... 192 8.8e-15 1
GENEDB_PFALCIPARUM|PF08_0077 - symbol:PF08_0077 "GDP-mann... 169 3.5e-12 1
UNIPROTKB|Q8IAX4 - symbol:PF08_0077 "GDP-mannose 4,6-dehy... 169 3.5e-12 1
UNIPROTKB|P0AC88 - symbol:gmd "GDP-mannose 4,6-dehydratas... 155 1.3e-10 1
TIGR_CMR|CPS_4199 - symbol:CPS_4199 "GDP-mannose 4,6-dehy... 153 2.2e-10 1
UNIPROTKB|P72586 - symbol:rfbD "GDP-D-mannose dehydratase... 134 4.0e-10 2
TAIR|locus:2080933 - symbol:MUR1 "MURUS 1" species:3702 "... 120 1.8e-09 2
UNIPROTKB|Q06952 - symbol:rfbD "Probable GDP-mannose 4,6-... 143 2.8e-09 1
TIGR_CMR|VC_0243 - symbol:VC_0243 "GDP-mannose 4,6-dehydr... 143 2.8e-09 1
TIGR_CMR|CBU_0689 - symbol:CBU_0689 "GDP-mannose 4,6-dehy... 125 3.3e-09 2
UNIPROTKB|P71790 - symbol:gmdA "GDP-D-mannose dehydratase... 110 2.0e-08 2
TAIR|locus:2155036 - symbol:GMD1 ""GDP-D-mannose 4,6-dehy... 127 1.4e-07 1
>FB|FBgn0031661 [details] [associations]
symbol:Gmd "GDP-mannose 4,6-dehydratase" species:7227
"Drosophila melanogaster" [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=ISS;IDA] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=IMP] [GO:2000035 "regulation of
stem cell division" evidence=IMP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:AE014134 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0007219 GO:GO:0005622 GO:GO:2000035
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
GO:GO:0042350 CTD:33716 EMBL:AM231687 EMBL:AY089519
RefSeq:NP_608888.2 UniGene:Dm.4967 ProteinModelPortal:Q9VMW9
SMR:Q9VMW9 STRING:Q9VMW9 PaxDb:Q9VMW9 EnsemblMetazoa:FBtr0079049
GeneID:33716 KEGG:dme:Dmel_CG8890 FlyBase:FBgn0031661
InParanoid:Q9VMW9 OrthoDB:EOG40K6FB PhylomeDB:Q9VMW9
GenomeRNAi:33716 NextBio:784930 Bgee:Q9VMW9 GermOnline:CG8890
Uniprot:Q9VMW9
Length = 395
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 51/72 (70%), Positives = 60/72 (83%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRV 71
AMWMMLQ+++P D+VIATGETHSVREFVEAAF +I + I W+G G DEVG E TGIVRV
Sbjct: 281 AMWMMLQRESPSDYVIATGETHSVREFVEAAFKHIDREITWKGKGVDEVGVENGTGIVRV 340
Query: 72 KVNENYFRPTEV 83
++N YFRPTEV
Sbjct: 341 RINPKYFRPTEV 352
>UNIPROTKB|F6Z8R0 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:13616
"Monodelphis domestica" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
Ensembl:ENSMODT00000010461 Uniprot:F6Z8R0
Length = 347
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 50/72 (69%), Positives = 59/72 (81%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRV 71
AMW+MLQ D P+DFVIATGE HSVREFVE +F YIGKTIVWEG ++EVG+ K+TG + V
Sbjct: 258 AMWLMLQTDEPEDFVIATGEVHSVREFVEKSFFYIGKTIVWEGKNENEVGRCKETGKIHV 317
Query: 72 KVNENYFRPTEV 83
VN Y+RPTEV
Sbjct: 318 TVNHKYYRPTEV 329
>UNIPROTKB|F1P299 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0007219 "Notch signaling
pathway" evidence=ISS] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
EMBL:AADN02036511 EMBL:AADN02036512 EMBL:AADN02036513
EMBL:AADN02036514 EMBL:AADN02036515 EMBL:AADN02036516
EMBL:AADN02036517 EMBL:AADN02036518 IPI:IPI00578850
Ensembl:ENSGALT00000020945 Uniprot:F1P299
Length = 358
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 49/72 (68%), Positives = 59/72 (81%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRV 71
AMW+MLQ D P+DFVIATGE HSVREFVE +F +IGKTIVWEG ++EVG+ K+TG + V
Sbjct: 244 AMWLMLQTDEPEDFVIATGEVHSVREFVEKSFKHIGKTIVWEGKNENEVGRCKETGKIHV 303
Query: 72 KVNENYFRPTEV 83
VN Y+RPTEV
Sbjct: 304 TVNHKYYRPTEV 315
>UNIPROTKB|E9PI88 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA] [GO:0019673 "GDP-mannose
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GO:GO:0019673 EMBL:AL034344 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AL033517 EMBL:AL035693 EMBL:AL137179
EMBL:AL158139 RefSeq:NP_001240775.1 UniGene:Hs.144496
UniGene:Hs.660919 GeneID:2762 KEGG:hsa:2762 CTD:2762 HGNC:HGNC:4369
ChiTaRS:GMDS GenomeRNAi:2762 EMBL:AL354670 EMBL:AL451141
EMBL:AL591048 IPI:IPI00642048 ProteinModelPortal:E9PI88 SMR:E9PI88
Ensembl:ENST00000530927 UCSC:uc021ykn.1 ArrayExpress:E9PI88
Bgee:E9PI88 Uniprot:E9PI88
Length = 342
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 50/72 (69%), Positives = 60/72 (83%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRV 71
AMW+MLQ D P+DFVIATGE HSVREFVE +FL+IGKTIVWEG ++EVG+ K+TG V V
Sbjct: 228 AMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHV 287
Query: 72 KVNENYFRPTEV 83
V+ Y+RPTEV
Sbjct: 288 TVDLKYYRPTEV 299
>UNIPROTKB|O60547 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IC]
[GO:0070401 "NADP+ binding" evidence=IDA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IGI;IDA] [GO:0019673
"GDP-mannose metabolic process" evidence=IGI;IDA] [GO:0007219
"Notch signaling pathway" evidence=ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005737 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 EMBL:AL034344
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:IAYNLTD HOVERGEN:HBG000727 EMBL:AF042377
EMBL:CR541929 EMBL:CR541947 EMBL:AL033517 EMBL:AL035693
EMBL:AL137179 EMBL:AL158139 EMBL:BC000117 EMBL:AF040260
IPI:IPI00030207 RefSeq:NP_001240775.1 RefSeq:NP_001491.1
UniGene:Hs.144496 UniGene:Hs.660919 PDB:1T2A PDBsum:1T2A
ProteinModelPortal:O60547 SMR:O60547 IntAct:O60547 STRING:O60547
PhosphoSite:O60547 PaxDb:O60547 PeptideAtlas:O60547 PRIDE:O60547
DNASU:2762 Ensembl:ENST00000380815 GeneID:2762 KEGG:hsa:2762
UCSC:uc003mtq.3 CTD:2762 GeneCards:GC06M001624 HGNC:HGNC:4369
HPA:HPA031528 MIM:602884 neXtProt:NX_O60547 PharmGKB:PA28754
InParanoid:O60547 OrthoDB:EOG4FXR7M PhylomeDB:O60547 ChiTaRS:GMDS
EvolutionaryTrace:O60547 GenomeRNAi:2762 NextBio:10866
ArrayExpress:O60547 Bgee:O60547 CleanEx:HS_GMDS
Genevestigator:O60547 GermOnline:ENSG00000112699 Uniprot:O60547
Length = 372
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 50/72 (69%), Positives = 60/72 (83%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRV 71
AMW+MLQ D P+DFVIATGE HSVREFVE +FL+IGKTIVWEG ++EVG+ K+TG V V
Sbjct: 258 AMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHV 317
Query: 72 KVNENYFRPTEV 83
V+ Y+RPTEV
Sbjct: 318 TVDLKYYRPTEV 329
>UNIPROTKB|F6W683 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD Ensembl:ENSECAT00000001963 Uniprot:F6W683
Length = 343
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 50/72 (69%), Positives = 60/72 (83%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRV 71
AMW+MLQ D P+DFVIATGE HSVREFVE +FL+IGKTIVWEG ++EVG+ K+TG V V
Sbjct: 229 AMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHV 288
Query: 72 KVNENYFRPTEV 83
V+ Y+RPTEV
Sbjct: 289 TVDLRYYRPTEV 300
>UNIPROTKB|F7EWI9 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD CTD:2762 EMBL:ACFV01112271 EMBL:ACFV01112272
EMBL:ACFV01112273 EMBL:ACFV01112274 EMBL:ACFV01112275
EMBL:ACFV01112276 EMBL:ACFV01112277 EMBL:ACFV01112278
EMBL:ACFV01112279 EMBL:ACFV01112280 EMBL:ACFV01112281
EMBL:ACFV01112282 EMBL:ACFV01112283 EMBL:ACFV01112284
EMBL:ACFV01112285 EMBL:ACFV01112286 EMBL:ACFV01112287
EMBL:ACFV01112288 EMBL:ACFV01112289 EMBL:ACFV01112290
EMBL:ACFV01112291 EMBL:ACFV01112292 EMBL:ACFV01112293
EMBL:ACFV01112294 EMBL:ACFV01112295 EMBL:ACFV01112296
EMBL:ACFV01112297 EMBL:ACFV01112298 EMBL:ACFV01112299
EMBL:ACFV01112300 EMBL:ACFV01112301 RefSeq:XP_002746325.1
ProteinModelPortal:F7EWI9 Ensembl:ENSCJAT00000038466
GeneID:100390839 Uniprot:F7EWI9
Length = 372
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 50/72 (69%), Positives = 60/72 (83%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRV 71
AMW+MLQ D P+DFVIATGE HSVREFVE +FL+IGKTIVWEG ++EVG+ K+TG V V
Sbjct: 258 AMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHV 317
Query: 72 KVNENYFRPTEV 83
V+ Y+RPTEV
Sbjct: 318 TVDLKYYRPTEV 329
>UNIPROTKB|Q6P621 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
OrthoDB:EOG4FXR7M EMBL:AAMC01033108 EMBL:AAMC01033109
EMBL:AAMC01033110 EMBL:AAMC01033111 EMBL:AAMC01033112
EMBL:AAMC01033113 EMBL:AAMC01033114 EMBL:AAMC01033115
EMBL:AAMC01033116 EMBL:AAMC01033117 EMBL:AAMC01033118
EMBL:AAMC01033119 EMBL:AAMC01033120 EMBL:AAMC01033121
EMBL:AAMC01033122 EMBL:AAMC01033123 EMBL:AAMC01033124
EMBL:AAMC01033125 EMBL:AAMC01033126 EMBL:AAMC01033127
EMBL:AAMC01033128 EMBL:AAMC01033129 EMBL:AAMC01033130
EMBL:AAMC01033131 EMBL:AAMC01033132 EMBL:BC062513 UniGene:Str.7169
ProteinModelPortal:Q6P621 STRING:Q6P621 Ensembl:ENSXETT00000001321
Xenbase:XB-GENE-943015 InParanoid:Q6P621 Bgee:Q6P621 Uniprot:Q6P621
Length = 383
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 48/72 (66%), Positives = 60/72 (83%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRV 71
AMW+MLQ D P+DFVI+TGE HSVREFVE AF++IGKTIVWEG ++EVG+ +TG + V
Sbjct: 269 AMWLMLQTDEPEDFVISTGEVHSVREFVEKAFMHIGKTIVWEGKNENEVGRCSETGKIHV 328
Query: 72 KVNENYFRPTEV 83
KV+ Y+RPTEV
Sbjct: 329 KVDHKYYRPTEV 340
>UNIPROTKB|E2RC02 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070401 "NADP+ binding" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0005622 GO:GO:0070401 GO:GO:0019673
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:DAIRDWG EMBL:AAEX03017462 Ensembl:ENSCAFT00000014648
Uniprot:E2RC02
Length = 300
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 49/72 (68%), Positives = 60/72 (83%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRV 71
AMW+MLQ D P+DFVIATGE HSVREFVE +FL+IGKTIVWEG ++EVG+ K+TG + V
Sbjct: 229 AMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKIHV 288
Query: 72 KVNENYFRPTEV 83
V+ Y+RPTEV
Sbjct: 289 TVDLKYYRPTEV 300
>UNIPROTKB|F6W0W9 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase isoform 1"
species:9544 "Macaca mulatta" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:JU322217 EMBL:JV046790 RefSeq:NP_001253718.1
UniGene:Mmu.34300 Ensembl:ENSMMUT00000008111 GeneID:707051
KEGG:mcc:707051 NextBio:19971634 Uniprot:F6W0W9
Length = 372
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 49/72 (68%), Positives = 60/72 (83%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRV 71
AMW+MLQ D P+DFVIATGE HSVREFVE +F++IGKTIVWEG ++EVG+ K+TG V V
Sbjct: 258 AMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIGKTIVWEGKNENEVGRCKETGKVHV 317
Query: 72 KVNENYFRPTEV 83
V+ Y+RPTEV
Sbjct: 318 TVDLKYYRPTEV 329
>MGI|MGI:1891112 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=ISO] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISO]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISO] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0070401 "NADP+ binding" evidence=ISO] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 MGI:MGI:1891112 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
HOVERGEN:HBG000727 CTD:2762 OrthoDB:EOG4FXR7M EMBL:AL645643
EMBL:AL645664 EMBL:AL645697 EMBL:AL645783 EMBL:AL645763
EMBL:BC031788 EMBL:BC093502 IPI:IPI00169546 RefSeq:NP_666153.1
UniGene:Mm.247143 ProteinModelPortal:Q8K0C9 SMR:Q8K0C9
STRING:Q8K0C9 PhosphoSite:Q8K0C9 PaxDb:Q8K0C9 PRIDE:Q8K0C9
Ensembl:ENSMUST00000041859 GeneID:218138 KEGG:mmu:218138
UCSC:uc007pzq.1 InParanoid:Q8K0C9 NextBio:376160 Bgee:Q8K0C9
CleanEx:MM_GMDS Genevestigator:Q8K0C9 GermOnline:ENSMUSG00000038372
Uniprot:Q8K0C9
Length = 372
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 49/72 (68%), Positives = 60/72 (83%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRV 71
AMW+MLQ D P+DFVIATGE HSVREFVE +F++IGKTIVWEG ++EVG+ K+TG V V
Sbjct: 258 AMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIGKTIVWEGKNENEVGRCKETGKVHV 317
Query: 72 KVNENYFRPTEV 83
V+ Y+RPTEV
Sbjct: 318 TVDLKYYRPTEV 329
>UNIPROTKB|B5XE59 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:8030
"Salmo salar" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
EMBL:BT049328 RefSeq:NP_001134845.1 UniGene:Ssa.6439
ProteinModelPortal:B5XE59 GeneID:100196344 Uniprot:B5XE59
Length = 370
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 46/72 (63%), Positives = 61/72 (84%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRV 71
AMW+MLQQ+ P+D VIATGE HSVREFVE +F ++GKTIVWEG ++EVG+ ++TG++ V
Sbjct: 256 AMWLMLQQEEPEDLVIATGEVHSVREFVEKSFKHVGKTIVWEGKDENEVGRCQETGVIHV 315
Query: 72 KVNENYFRPTEV 83
KV+ Y+RPTEV
Sbjct: 316 KVDSKYYRPTEV 327
>UNIPROTKB|Q8K3X3 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:10029
"Cricetulus griseus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
GO:GO:0019673 GO:GO:0042351 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AF525364 RefSeq:NP_001233625.1 ProteinModelPortal:Q8K3X3
SMR:Q8K3X3 GeneID:100689436 CTD:33716 HOVERGEN:HBG000727
Uniprot:Q8K3X3
Length = 372
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 48/72 (66%), Positives = 60/72 (83%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRV 71
AMW+MLQ D P+DFVIATGE HSVREFVE +F++IGKTIVWEG ++EVG+ K+TG + V
Sbjct: 258 AMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIGKTIVWEGKNENEVGRCKETGKIHV 317
Query: 72 KVNENYFRPTEV 83
V+ Y+RPTEV
Sbjct: 318 TVDLKYYRPTEV 329
>RGD|1311008 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISO;ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISO;ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISO;ISS]
[GO:0070401 "NADP+ binding" evidence=ISO;ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 RGD:1311008
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
EMBL:CH473977 GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
CTD:2762 OrthoDB:EOG4FXR7M EMBL:BC104708 IPI:IPI00362967
RefSeq:NP_001034695.1 UniGene:Rn.212995 SMR:Q3MHS7 STRING:Q3MHS7
Ensembl:ENSRNOT00000023691 GeneID:291095 KEGG:rno:291095
UCSC:RGD:1311008 InParanoid:Q3MHS7 NextBio:632111
Genevestigator:Q3MHS7 Uniprot:Q3MHS7
Length = 372
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 48/72 (66%), Positives = 60/72 (83%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRV 71
AMW+MLQ D P+DFVIATGE HSVREFVE +F++IGKTIVWEG ++EVG+ K+TG + V
Sbjct: 258 AMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIGKTIVWEGKNENEVGRCKETGKIHV 317
Query: 72 KVNENYFRPTEV 83
V+ Y+RPTEV
Sbjct: 318 TVDLKYYRPTEV 329
>UNIPROTKB|F1RX12 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0070401 "NADP+ binding" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:CT961043 EMBL:CU302446 EMBL:CU682457
RefSeq:XP_003128195.3 Ensembl:ENSSSCT00000001084 GeneID:100520846
KEGG:ssc:100520846 Uniprot:F1RX12
Length = 350
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 49/72 (68%), Positives = 60/72 (83%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRV 71
AMW+MLQ D P+DFVIATGE HSVREFVE +FL+IGKTIVWEG + EVG+ K++G V V
Sbjct: 236 AMWLMLQSDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKDEHEVGRCKESGRVHV 295
Query: 72 KVNENYFRPTEV 83
+V+ Y+RPTEV
Sbjct: 296 RVDLKYYRPTEV 307
>ZFIN|ZDB-GENE-050419-45 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0019673 "GDP-mannose metabolic
process" evidence=IEA;ISS] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0008417 "fucosyltransferase activity"
evidence=IMP] [GO:0007219 "Notch signaling pathway" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0036065
"fucosylation" evidence=IMP] [GO:0021744 "dorsal motor nucleus of
vagus nerve development" evidence=IMP] [GO:0021564 "vagus nerve
development" evidence=IMP] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 ZFIN:ZDB-GENE-050419-45 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0007219 GO:GO:0005622
GO:GO:0010842 GO:GO:0019673 GO:GO:0008417 EMBL:BX510653 KO:K01711
OMA:INPKYFR GO:GO:0008446 TIGRFAMs:TIGR01472
GeneTree:ENSGT00440000033640 CTD:2762 GO:GO:0021744 GO:GO:0021564
EMBL:BX678772 IPI:IPI00650926 RefSeq:NP_956783.3 UniGene:Dr.26662
Ensembl:ENSDART00000103234 GeneID:393461 KEGG:dre:393461
ArrayExpress:F1QPT3 Bgee:F1QPT3 Uniprot:F1QPT3
Length = 377
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 47/72 (65%), Positives = 60/72 (83%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRV 71
AMW+MLQQ+ P DFVIATGE HSVREFVE AF ++GKTIVWEG + EVG+ ++TG++ V
Sbjct: 263 AMWLMLQQEEPVDFVIATGEVHSVREFVERAFKHVGKTIVWEGKDEKEVGRCQETGVIHV 322
Query: 72 KVNENYFRPTEV 83
+V+ Y+RPTEV
Sbjct: 323 RVDPKYYRPTEV 334
>UNIPROTKB|Q8AVI1 [details] [associations]
symbol:gmds "Gmds-prov protein" species:8355 "Xenopus
laevis" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
HSSP:P32054 EMBL:BC042270 EMBL:BC111472 RefSeq:NP_001080352.1
UniGene:Xl.10260 SMR:Q8AVI1 GeneID:380044 KEGG:xla:380044
Xenbase:XB-GENE-943021 Uniprot:Q8AVI1
Length = 369
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 48/72 (66%), Positives = 59/72 (81%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRV 71
AMW+MLQ D P+DFVI+TGE HSVREFVE AF +IGKTIVWEG ++EVG+ +TG + V
Sbjct: 255 AMWLMLQTDEPEDFVISTGEVHSVREFVEKAFKHIGKTIVWEGKNENEVGRCSETGKIHV 314
Query: 72 KVNENYFRPTEV 83
KV+ Y+RPTEV
Sbjct: 315 KVDLKYYRPTEV 326
>WB|WBGene00010166 [details] [associations]
symbol:gmd-2 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic
process" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 247 (92.0 bits), Expect = 7.0e-21, P = 7.0e-21
Identities = 48/72 (66%), Positives = 56/72 (77%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRV 71
AMW +LQQDTP DFVIATG+ SVREF AF IG+ +VWEG G DEVGK +D G+VRV
Sbjct: 269 AMWRILQQDTPDDFVIATGKQFSVREFCNLAFAEIGEQLVWEGEGVDEVGKNQD-GVVRV 327
Query: 72 KVNENYFRPTEV 83
KV+ Y+RPTEV
Sbjct: 328 KVSPKYYRPTEV 339
>UNIPROTKB|O45583 [details] [associations]
symbol:gmd-2 "GDP-mannose 4,6 dehydratase 2" species:6239
"Caenorhabditis elegans" [GO:0019673 "GDP-mannose metabolic
process" evidence=IDA] [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 247 (92.0 bits), Expect = 7.0e-21, P = 7.0e-21
Identities = 48/72 (66%), Positives = 56/72 (77%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRV 71
AMW +LQQDTP DFVIATG+ SVREF AF IG+ +VWEG G DEVGK +D G+VRV
Sbjct: 269 AMWRILQQDTPDDFVIATGKQFSVREFCNLAFAEIGEQLVWEGEGVDEVGKNQD-GVVRV 327
Query: 72 KVNENYFRPTEV 83
KV+ Y+RPTEV
Sbjct: 328 KVSPKYYRPTEV 339
>WB|WBGene00000266 [details] [associations]
symbol:bre-1 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=IDA] [GO:0055120 "striated muscle dense body"
evidence=IDA] [GO:0030017 "sarcomere" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005783 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0030017 GO:GO:0055120 GO:GO:0071688
GO:GO:0075015 GO:GO:0017085 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AM231683 EMBL:AM231684 EMBL:Z68215 PIR:T20182
RefSeq:NP_001076668.1 RefSeq:NP_001076669.1 RefSeq:NP_001076670.1
RefSeq:NP_501563.1 RefSeq:NP_501564.1 UniGene:Cel.13248
ProteinModelPortal:Q18801 SMR:Q18801 STRING:Q18801 PaxDb:Q18801
PRIDE:Q18801 EnsemblMetazoa:C53B4.7b GeneID:177717
KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717 WormBase:C53B4.7a
WormBase:C53B4.7b WormBase:C53B4.7c WormBase:C53B4.7d
WormBase:C53B4.7e GeneTree:ENSGT00440000033640 InParanoid:Q18801
OMA:IAYNLTD NextBio:898062 GO:GO:0042350 Uniprot:Q18801
Length = 399
Score = 232 (86.7 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 44/72 (61%), Positives = 54/72 (75%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRV 71
AMW +LQ D+P DFVIATG+ SVREF AF IG+ + WEG G +EVGK KD G++RV
Sbjct: 286 AMWRILQHDSPDDFVIATGKQFSVREFCNLAFAEIGEVLQWEGEGVEEVGKNKD-GVIRV 344
Query: 72 KVNENYFRPTEV 83
KV+ Y+RPTEV
Sbjct: 345 KVSPKYYRPTEV 356
>UNIPROTKB|Q18801 [details] [associations]
symbol:bre-1 "GDP-mannose 4,6 dehydratase 1" species:6239
"Caenorhabditis elegans" [GO:0017085 "response to insecticide"
evidence=IMP] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IDA] [GO:0075015 "formation of infection structure on or
near host" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005783
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030017
GO:GO:0055120 GO:GO:0071688 GO:GO:0075015 GO:GO:0017085
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AM231683 EMBL:AM231684 EMBL:Z68215
PIR:T20182 RefSeq:NP_001076668.1 RefSeq:NP_001076669.1
RefSeq:NP_001076670.1 RefSeq:NP_501563.1 RefSeq:NP_501564.1
UniGene:Cel.13248 ProteinModelPortal:Q18801 SMR:Q18801
STRING:Q18801 PaxDb:Q18801 PRIDE:Q18801 EnsemblMetazoa:C53B4.7b
GeneID:177717 KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717
WormBase:C53B4.7a WormBase:C53B4.7b WormBase:C53B4.7c
WormBase:C53B4.7d WormBase:C53B4.7e GeneTree:ENSGT00440000033640
InParanoid:Q18801 OMA:IAYNLTD NextBio:898062 GO:GO:0042350
Uniprot:Q18801
Length = 399
Score = 232 (86.7 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 44/72 (61%), Positives = 54/72 (75%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRV 71
AMW +LQ D+P DFVIATG+ SVREF AF IG+ + WEG G +EVGK KD G++RV
Sbjct: 286 AMWRILQHDSPDDFVIATGKQFSVREFCNLAFAEIGEVLQWEGEGVEEVGKNKD-GVIRV 344
Query: 72 KVNENYFRPTEV 83
KV+ Y+RPTEV
Sbjct: 345 KVSPKYYRPTEV 356
>DICTYBASE|DDB_G0284553 [details] [associations]
symbol:gmd "GDP-mannose dehydratase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;ISS] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0284553
GenomeReviews:CM000153_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AAFI02000066 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 RefSeq:XP_001134543.1 ProteinModelPortal:Q1ZXF7
SMR:Q1ZXF7 STRING:Q1ZXF7 EnsemblProtists:DDB0231676 GeneID:8624624
KEGG:ddi:DDB_G0284553 ProtClustDB:CLSZ2432853 Uniprot:Q1ZXF7
Length = 356
Score = 223 (83.6 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 44/72 (61%), Positives = 53/72 (73%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRV 71
AMW+MLQQ+ P+DFVIATGETHSVREFVE +F I I W G + E G + TG V V
Sbjct: 241 AMWLMLQQEKPEDFVIATGETHSVREFVEKSFKEIDIIIKWRGEAEKEEGYCEKTGKVYV 300
Query: 72 KVNENYFRPTEV 83
K++E Y+RPTEV
Sbjct: 301 KIDEKYYRPTEV 312
>TIGR_CMR|GSU_0626 [details] [associations]
symbol:GSU_0626 "GDP-mannose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0019673
KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
RefSeq:NP_951684.1 ProteinModelPortal:Q74FI2 SMR:Q74FI2
GeneID:2685242 KEGG:gsu:GSU0626 PATRIC:22024003 OMA:YACAKAY
ProtClustDB:CLSK827959 BioCyc:GSUL243231:GH27-625-MONOMER
Uniprot:Q74FI2
Length = 349
Score = 192 (72.6 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 35/72 (48%), Positives = 48/72 (66%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVRV 71
AMW+MLQQ DFV+ATGET SVREF E F +G + W+G G E G + ++G + +
Sbjct: 233 AMWLMLQQQEADDFVVATGETWSVREFAERVFARLGMPLEWQGKGGHEKGIDTNSGKIVI 292
Query: 72 KVNENYFRPTEV 83
+++ YFRP EV
Sbjct: 293 EIDPRYFRPAEV 304
>GENEDB_PFALCIPARUM|PF08_0077 [details] [associations]
symbol:PF08_0077 "GDP-mannose 4,6-dehydratase,
putative" species:5833 "Plasmodium falciparum" [GO:0006004 "fucose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005622 GO:GO:0006004
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG ProtClustDB:CLSZ2432853
EMBL:AL844507 RefSeq:XP_001349387.1 HSSP:P32054
ProteinModelPortal:Q8IAX4 SMR:Q8IAX4 EnsemblProtists:PF08_0077:mRNA
GeneID:2655276 KEGG:pfa:PF08_0077 EuPathDB:PlasmoDB:PF3D7_0813800
Uniprot:Q8IAX4
Length = 357
Score = 169 (64.5 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 33/73 (45%), Positives = 48/73 (65%)
Query: 11 YAMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVR 70
YAM++MLQQ+ DFVI + E HSVREF E +F ++ I W G G E+G +++ ++
Sbjct: 226 YAMYLMLQQNEADDFVICSNEQHSVREFCEISFSFVNIHIKWIGKGIQEIGVDQNNNVL- 284
Query: 71 VKVNENYFRPTEV 83
+K +E YFR EV
Sbjct: 285 IKKHEKYFRNCEV 297
>UNIPROTKB|Q8IAX4 [details] [associations]
symbol:PF08_0077 "GDP-mannose 4,6-dehydratase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0006004 "fucose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005622 GO:GO:0006004
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG ProtClustDB:CLSZ2432853
EMBL:AL844507 RefSeq:XP_001349387.1 HSSP:P32054
ProteinModelPortal:Q8IAX4 SMR:Q8IAX4 EnsemblProtists:PF08_0077:mRNA
GeneID:2655276 KEGG:pfa:PF08_0077 EuPathDB:PlasmoDB:PF3D7_0813800
Uniprot:Q8IAX4
Length = 357
Score = 169 (64.5 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 33/73 (45%), Positives = 48/73 (65%)
Query: 11 YAMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEKDTGIVR 70
YAM++MLQQ+ DFVI + E HSVREF E +F ++ I W G G E+G +++ ++
Sbjct: 226 YAMYLMLQQNEADDFVICSNEQHSVREFCEISFSFVNIHIKWIGKGIQEIGVDQNNNVL- 284
Query: 71 VKVNENYFRPTEV 83
+K +E YFR EV
Sbjct: 285 IKKHEKYFRNCEV 297
>UNIPROTKB|P0AC88 [details] [associations]
symbol:gmd "GDP-mannose 4,6-dehydratase" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0009242 "colanic acid biosynthetic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 UniPathway:UPA00980 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0005622 GO:GO:0009103 GO:GO:0019673 GO:GO:0042351 EMBL:U38473
GO:GO:0009242 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 PIR:D64971 RefSeq:NP_416557.1 RefSeq:YP_490295.1
PDB:1DB3 PDBsum:1DB3 ProteinModelPortal:P0AC88 SMR:P0AC88
DIP:DIP-48216N IntAct:P0AC88 EnsemblBacteria:EBESCT00000004343
EnsemblBacteria:EBESCT00000015616 GeneID:12930696 GeneID:946562
KEGG:ecj:Y75_p2016 KEGG:eco:b2053 PATRIC:32119439 EchoBASE:EB1735
EcoGene:EG11787 HOGENOM:HOG000168003 ProtClustDB:CLSK880276
BioCyc:EcoCyc:GDPMANDEHYDRA-MONOMER
BioCyc:ECOL316407:JW2038-MONOMER
BioCyc:MetaCyc:GDPMANDEHYDRA-MONOMER EvolutionaryTrace:P0AC88
Genevestigator:P0AC88 Uniprot:P0AC88
Length = 373
Score = 155 (59.6 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 38/80 (47%), Positives = 48/80 (60%)
Query: 14 WMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVG-----KEKDT-- 66
WMMLQQ+ P+DFVIATG +SVR+FVE A +G + +EGTG +E G D
Sbjct: 238 WMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPG 297
Query: 67 ---GIVRVKVNENYFRPTEV 83
G V + V+ YFRP EV
Sbjct: 298 VKPGDVIIAVDPRYFRPAEV 317
>TIGR_CMR|CPS_4199 [details] [associations]
symbol:CPS_4199 "GDP-mannose 4,6-dehydratase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0019673
eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 RefSeq:YP_270850.1
ProteinModelPortal:Q47WH2 SMR:Q47WH2 STRING:Q47WH2 GeneID:3519434
KEGG:cps:CPS_4199 PATRIC:21471261 ProtClustDB:CLSK589180
BioCyc:CPSY167879:GI48-4209-MONOMER Uniprot:Q47WH2
Length = 374
Score = 153 (58.9 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 37/80 (46%), Positives = 45/80 (56%)
Query: 14 WMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEK--------- 64
WMMLQQ+ P DFVIATG+ SVREFV + L G + + G G DEV +
Sbjct: 240 WMMLQQEHPDDFVIATGKQISVREFVTLSALEAGIELTFSGEGLDEVARVTKIIGDNAPA 299
Query: 65 -DTGIVRVKVNENYFRPTEV 83
G + VKV+ YFRP EV
Sbjct: 300 LSVGDIMVKVDPRYFRPAEV 319
>UNIPROTKB|P72586 [details] [associations]
symbol:rfbD "GDP-D-mannose dehydratase" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:BA000022 GenomeReviews:BA000022_GR
GO:GO:0019673 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P32054 PIR:S74433
RefSeq:NP_439905.1 RefSeq:YP_005649960.1 ProteinModelPortal:P72586
SMR:P72586 IntAct:P72586 STRING:P72586 GeneID:12255298
GeneID:951882 KEGG:syn:sll1212 KEGG:syy:SYNGTS_0007 PATRIC:23836866
ProtClustDB:CLSK892430 Uniprot:P72586
Length = 362
Score = 134 (52.2 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 24/42 (57%), Positives = 32/42 (76%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWE 53
AMW MLQQ+ P D+V+ATGETH V+EF+E AF Y+ + W+
Sbjct: 240 AMWAMLQQEQPDDYVVATGETHEVKEFLEIAFGYVN--LNWQ 279
Score = 36 (17.7 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 71 VKVNENYFRPTEV 83
V +E Y RP EV
Sbjct: 282 VAFDERYLRPAEV 294
>TAIR|locus:2080933 [details] [associations]
symbol:MUR1 "MURUS 1" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS;IDA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009826 "unidimensional cell growth" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0006007 "glucose catabolic process"
evidence=RCA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005525
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009826 EMBL:AL132980
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 ProtClustDB:PLN02653
EMBL:U81805 EMBL:BT025710 EMBL:AY084574 IPI:IPI00519785 PIR:T45747
RefSeq:NP_190685.2 UniGene:At.23910 PDB:1N7G PDB:1N7H PDBsum:1N7G
PDBsum:1N7H ProteinModelPortal:P93031 SMR:P93031 STRING:P93031
PaxDb:P93031 PRIDE:P93031 EnsemblPlants:AT3G51160.1 GeneID:824280
KEGG:ath:AT3G51160 GeneFarm:4170 TAIR:At3g51160 InParanoid:P93031
OMA:DAIRDWG PhylomeDB:P93031 BioCyc:MetaCyc:AT3G51160-MONOMER
EvolutionaryTrace:P93031 Genevestigator:P93031 GermOnline:AT3G51160
Uniprot:P93031
Length = 373
Score = 120 (47.3 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 20/36 (55%), Positives = 29/36 (80%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIG 47
AMW+MLQQ+ P D+V+AT E H+V EF++ +F Y+G
Sbjct: 264 AMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLG 299
Score = 45 (20.9 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 71 VKVNENYFRPTEV 83
V++++ YFRP EV
Sbjct: 306 VEIDQRYFRPAEV 318
>UNIPROTKB|Q06952 [details] [associations]
symbol:rfbD "Probable GDP-mannose 4,6-dehydratase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 143 (55.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 35/80 (43%), Positives = 47/80 (58%)
Query: 14 WMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDE-------VGKEKDT 66
WMMLQQD P+DFVIATG +SVREF++ + +G + + G G DE +G +
Sbjct: 239 WMMLQQDEPRDFVIATGVQYSVREFIDMSARELGIELEFVGKGVDEKAVVKSVIGTKAPA 298
Query: 67 ---GIVRVKVNENYFRPTEV 83
G + V V+ YFRP EV
Sbjct: 299 IKVGDIIVAVDPAYFRPAEV 318
>TIGR_CMR|VC_0243 [details] [associations]
symbol:VC_0243 "GDP-mannose 4,6-dehydratase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 143 (55.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 35/80 (43%), Positives = 47/80 (58%)
Query: 14 WMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDE-------VGKEKDT 66
WMMLQQD P+DFVIATG +SVREF++ + +G + + G G DE +G +
Sbjct: 239 WMMLQQDEPRDFVIATGVQYSVREFIDMSARELGIELEFVGKGVDEKAVVKSVIGTKAPA 298
Query: 67 ---GIVRVKVNENYFRPTEV 83
G + V V+ YFRP EV
Sbjct: 299 IKVGDIIVAVDPAYFRPAEV 318
>TIGR_CMR|CBU_0689 [details] [associations]
symbol:CBU_0689 "GDP-mannose 4,6-dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GenomeReviews:AE016828_GR GO:GO:0019673 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P93031 EMBL:AF387640
ProteinModelPortal:Q93N54 SMR:Q93N54 PRIDE:Q93N54 PATRIC:17930061
ProtClustDB:CLSK914242 BioCyc:CBUR227377:GJ7S-687-MONOMER
Uniprot:Q93N54
Length = 348
Score = 125 (49.1 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAF 43
AMW+MLQQDTP D+VIATGET SV+E +E +F
Sbjct: 236 AMWLMLQQDTPDDYVIATGETWSVKELLEYSF 267
Score = 36 (17.7 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 71 VKVNENYFRPTEV 83
V ++ Y+RP EV
Sbjct: 278 VVIDPKYYRPAEV 290
>UNIPROTKB|P71790 [details] [associations]
symbol:gmdA "GDP-D-mannose dehydratase gmdA (GDP-mannose
4,6 dehydratase) (GMD)" species:83332 "Mycobacterium tuberculosis
H37Rv" [GO:0005886 "plasma membrane" evidence=IDA] [GO:0071456
"cellular response to hypoxia" evidence=IEP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005886
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842576 GO:GO:0071456 GO:GO:0005622
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG HSSP:P32054 EMBL:CP003248
PIR:B70714 RefSeq:NP_216027.1 RefSeq:YP_006514898.1
ProteinModelPortal:P71790 SMR:P71790 PRIDE:P71790
EnsemblBacteria:EBMYCT00000003919 GeneID:13320108 GeneID:886529
KEGG:mtu:Rv1511 KEGG:mtv:RVBD_1511 PATRIC:18151910
TubercuList:Rv1511 ProtClustDB:CLSK791213 Uniprot:P71790
Length = 340
Score = 110 (43.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 13 MWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWE 53
MW MLQ D P DFV+ATG +VREF AAF + G + W+
Sbjct: 233 MWRMLQTDEPDDFVLATGRGFTVREFARAAFEHAG--LDWQ 271
Score = 44 (20.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 71 VKVNENYFRPTEV 83
VK ++ Y RPTEV
Sbjct: 274 VKFDQRYLRPTEV 286
>TAIR|locus:2155036 [details] [associations]
symbol:GMD1 ""GDP-D-mannose 4,6-dehydratase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=ISM] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA;ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AB022211 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 EMBL:AF195140
IPI:IPI00517362 RefSeq:NP_201429.1 UniGene:At.46822
ProteinModelPortal:Q9SNY3 SMR:Q9SNY3 IntAct:Q9SNY3 STRING:Q9SNY3
PaxDb:Q9SNY3 PRIDE:Q9SNY3 EnsemblPlants:AT5G66280.1 GeneID:836760
KEGG:ath:AT5G66280 TAIR:At5g66280 InParanoid:Q9SNY3
PhylomeDB:Q9SNY3 ProtClustDB:PLN02653 Genevestigator:Q9SNY3
GermOnline:AT5G66280 Uniprot:Q9SNY3
Length = 361
Score = 127 (49.8 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 25/53 (47%), Positives = 38/53 (71%)
Query: 12 AMWMMLQQDTPQDFVIATGETHSVREFVEAAFLYIGKTIVWEGTGKDEVGKEK 64
AMW+MLQQ+ P D+V+AT E+H+V+EF++ +F Y+G + W KD V +K
Sbjct: 252 AMWLMLQQEKPDDYVVATEESHTVKEFLDVSFGYVG--LNW----KDHVEIDK 298
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 86 86 0.00091 102 3 11 22 0.46 29
29 0.47 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 549 (58 KB)
Total size of DFA: 110 KB (2074 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.56u 0.07s 9.63t Elapsed: 00:00:06
Total cpu time: 9.57u 0.07s 9.64t Elapsed: 00:00:07
Start: Thu Aug 15 12:21:01 2013 End: Thu Aug 15 12:21:08 2013