BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15785
(542 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/182 (65%), Positives = 133/182 (73%), Gaps = 40/182 (21%)
Query: 357 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGPINFTM 416
FDQ+QIQ FKEAFNMIDQNRDGFIDKEDLHDMLAS+GKNPTD+YLEGMM EAPGPINFTM
Sbjct: 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAPGPINFTM 60
Query: 417 FLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLN 476
FLT+FG++L GTDPEDVI+NAF CFDE+ SG I+E+ LRELLT+MGDRFTDE
Sbjct: 61 FLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDE-------- 112
Query: 477 HCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYREAPI-KNGMFDYIEFTRILKHG 535
EVDEMYREAPI K G F+Y+EFTRILKHG
Sbjct: 113 -------------------------------EVDEMYREAPIDKKGNFNYVEFTRILKHG 141
Query: 536 AK 537
AK
Sbjct: 142 AK 143
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 106/188 (56%), Gaps = 39/188 (20%)
Query: 351 SNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPG 410
SNVFA Q +Q KEAF MIDQNRDGFID DL +M +SLG+ P D L M+ EAPG
Sbjct: 11 SNVFARLPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAPG 70
Query: 411 PINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
P+NFTMFL++F D+L GTD E+ I+NAFG FDE ++ +N E +++LL +MGD F
Sbjct: 71 PLNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNF----- 125
Query: 471 MNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYREAPIKNGMFDYIEFTR 530
+K +R+ ++EAP++ G FDY+ F
Sbjct: 126 --------------------NKDEMRM--------------TFKEAPVEGGKFDYVRFVA 151
Query: 531 ILKHGAKD 538
++K D
Sbjct: 152 MIKGSGDD 159
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 107/190 (56%), Gaps = 41/190 (21%)
Query: 351 SNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPG 410
SNVFAMF Q Q+Q FKEAF +IDQ++DGFI K D+ SLG+ T+ L+ M+ EAPG
Sbjct: 45 SNVFAMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAPG 104
Query: 411 PINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
PINFTMFLT+FGDR+ GTD EDVI NAF FDE G EE L+ LT+ G++F+ +
Sbjct: 105 PINFTMFLTIFGDRIAGTDEEDVIVNAFNLFDE-GDGKCKEETLKRSLTTWGEKFSQD-- 161
Query: 471 MNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYREAPI-KNGMFDYIEFT 529
EVD+ EAPI NG+ D +F
Sbjct: 162 -------------------------------------EVDQALSEAPIDGNGLIDIKKFA 184
Query: 530 RILKHGAKDK 539
+IL GAK++
Sbjct: 185 QILTKGAKEE 194
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 105/187 (56%), Gaps = 39/187 (20%)
Query: 352 NVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGP 411
NVFA Q +Q KEAF MIDQNRDGFID DL +M +SLG+ P D L M+ EAPGP
Sbjct: 12 NVFARLPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAPGP 71
Query: 412 INFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVM 471
+NFTMFL++F D+L GTD E+ I+NAFG FDE ++ +N E +++LL +MGD F
Sbjct: 72 LNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNF------ 125
Query: 472 NEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYREAPIKNGMFDYIEFTRI 531
+K +R+ ++EAP++ G FDY+ F +
Sbjct: 126 -------------------NKDEMRM--------------TFKEAPVEGGKFDYVRFVAM 152
Query: 532 LKHGAKD 538
+K D
Sbjct: 153 IKGSGDD 159
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 104/188 (55%), Gaps = 39/188 (20%)
Query: 351 SNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPG 410
S V Q QIQ KEAF MIDQNRDGFID DL +M +SLG+ P D L M+ EAPG
Sbjct: 7 SGVLTKLPQKQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAPG 66
Query: 411 PINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
P+NFTMFL++F D+L GTD E+ I+NAFG FDE ++ +N E +++LL +MGD F
Sbjct: 67 PLNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNF----- 121
Query: 471 MNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYREAPIKNGMFDYIEFTR 530
+K +R+ ++EAP++ G FDY+ F
Sbjct: 122 --------------------NKDEMRM--------------TFKEAPVEGGKFDYVRFVA 147
Query: 531 ILKHGAKD 538
++K D
Sbjct: 148 MIKGSGDD 155
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 91/122 (74%), Gaps = 1/122 (0%)
Query: 352 NVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGK-NPTDDYLEGMMGEAPG 410
NVF+MFDQ QIQ+FKEAF +IDQNRDG IDK+DL + A++G+ N ++ L+ M+ EA G
Sbjct: 1 NVFSMFDQTQIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASG 60
Query: 411 PINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
PINFT+FLT+FG++L+G DPEDVI AF D D G I + L ELLT+ DRFT E++
Sbjct: 61 PINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFTPEEI 120
Query: 471 MN 472
N
Sbjct: 121 KN 122
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 84/114 (73%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGPINFTMFL 418
Q Q+Q KEAF MIDQ+RDGFI EDL DM +SLG+ P DD L M+ E PG +NFT FL
Sbjct: 12 QRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQLNFTAFL 71
Query: 419 TLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMN 472
TLFG+++ GTDPED ++NAF FDED G I E+ L++LL +MGD F+ E++ N
Sbjct: 72 TLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKN 125
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 365 FKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAP 409
+ AF+M D++ GFI ++ L D+L ++G N + + ++ + +AP
Sbjct: 87 LRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAP 131
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 139 bits (350), Expect = 4e-33, Method: Composition-based stats.
Identities = 67/123 (54%), Positives = 91/123 (73%), Gaps = 1/123 (0%)
Query: 351 SNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGK-NPTDDYLEGMMGEAP 409
SNVF+MFD+ +I++FKEAF +IDQN DG IDK+DL + A++G+ N ++ L+ M+ EA
Sbjct: 13 SNVFSMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEAS 72
Query: 410 GPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDED 469
GPINFT+FLT+FG++L+G DPEDVI AF D D G I + L ELLT+ G RFT E+
Sbjct: 73 GPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEE 132
Query: 470 VMN 472
+ N
Sbjct: 133 IKN 135
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 103/188 (54%), Gaps = 39/188 (20%)
Query: 351 SNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPG 410
S V Q QIQ KEAF+MID +RDGF+ KED+ + LG+ P D L M+ EAPG
Sbjct: 6 SGVLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPG 65
Query: 411 PINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
P+NFTMFL++F D+L GTD E+ I+NAF FDE + +N E +++LL +MGD F
Sbjct: 66 PLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNF----- 120
Query: 471 MNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYREAPIKNGMFDYIEFTR 530
+K +R+ ++EAP++ G FDY++FT
Sbjct: 121 --------------------NKDEMRM--------------TFKEAPVEGGKFDYVKFTA 146
Query: 531 ILKHGAKD 538
++K ++
Sbjct: 147 MIKGSGEE 154
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 98/172 (56%), Gaps = 39/172 (22%)
Query: 362 IQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGPINFTMFLTLF 421
+Q KEAF MIDQNRDGFID DL + +SLG+ P D L M+ EAPGP+NFTMFL++F
Sbjct: 1 MQEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKEAPGPLNFTMFLSIF 60
Query: 422 GDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLEL 481
D+L GTD E+ I+NAFG FDED + +N E +++LL +MGD F
Sbjct: 61 SDKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNF---------------- 104
Query: 482 VDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYREAPIKNGMFDYIEFTRILK 533
+K +R+ ++EAP++ G FDY+ F ++K
Sbjct: 105 ---------NKDEMRM--------------TFKEAPVEGGKFDYVRFVAMIK 133
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 101/180 (56%), Gaps = 39/180 (21%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGPINFTMFL 418
Q QIQ KEAF+MID +RDGF+ KED+ + LG+ P D L M+ EAPGP+NFTMFL
Sbjct: 3 QKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFL 62
Query: 419 TLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHC 478
++F D+L GTD E+ I+NAF FDE + +N E +++LL +MGD F
Sbjct: 63 SIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNF------------- 109
Query: 479 LELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYREAPIKNGMFDYIEFTRILKHGAKD 538
+K +R+ ++EAP++ G FDY++FT ++K ++
Sbjct: 110 ------------NKDEMRM--------------TFKEAPVEGGKFDYVKFTAMIKGSGEE 143
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 99/175 (56%), Gaps = 39/175 (22%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGPINFTMFL 418
Q QIQ KEAF+MID +RDGF+ KED+ + LG+ P D L M+ EAPGP+NFTMFL
Sbjct: 2 QKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFL 61
Query: 419 TLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHC 478
++F D+L GTD E+ I+NAF FDE + +N E +++LL +MGD F
Sbjct: 62 SIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNF------------- 108
Query: 479 LELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYREAPIKNGMFDYIEFTRILK 533
+K +R+ ++EAP++ G FDY++FT ++K
Sbjct: 109 ------------NKDEMRM--------------TFKEAPVEGGKFDYVKFTAMIK 137
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 99/175 (56%), Gaps = 39/175 (22%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGPINFTMFL 418
Q QIQ KEAF+MID +RDGF+ KED+ + LG+ P D L M+ EAPGP+NFTMFL
Sbjct: 3 QKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFL 62
Query: 419 TLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHC 478
++F D+L GTD E+ I+NAF FDE + +N E +++LL +MGD F
Sbjct: 63 SIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNF------------- 109
Query: 479 LELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYREAPIKNGMFDYIEFTRILK 533
+K +R+ ++EAP++ G FDY++FT ++K
Sbjct: 110 ------------NKDEMRM--------------TFKEAPVEGGKFDYVKFTAMIK 138
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 98/173 (56%), Gaps = 39/173 (22%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGPINFTMFLTL 420
QIQ KEAF+MID +RDGF+ KED+ + LG+ P D L M+ EAPGP+NFTMFL++
Sbjct: 2 QIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSI 61
Query: 421 FGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLE 480
F D+L GTD E+ I+NAF FDE + +N E +++LL +MGD F
Sbjct: 62 FSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNF--------------- 106
Query: 481 LVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYREAPIKNGMFDYIEFTRILK 533
+K +R+ ++EAP++ G FDY++FT ++K
Sbjct: 107 ----------NKDEMRM--------------TFKEAPVEGGKFDYVKFTAMIK 135
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 128 bits (321), Expect = 8e-30, Method: Composition-based stats.
Identities = 62/117 (52%), Positives = 85/117 (72%), Gaps = 1/117 (0%)
Query: 357 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGK-NPTDDYLEGMMGEAPGPINFT 415
FD+ +I++FKEAF +IDQN DG IDK+DL + A++G+ N ++ L+ M+ EA GPINFT
Sbjct: 1 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGPINFT 60
Query: 416 MFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMN 472
+FLT+FG++L+G DPEDVI AF D D G I + L ELLT+ G RFT E++ N
Sbjct: 61 VFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKN 117
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 79/123 (64%), Gaps = 7/123 (5%)
Query: 355 AMFDQ---AQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE---- 407
AM DQ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E
Sbjct: 3 AMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 62
Query: 408 APGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTD 467
G I+F FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TD
Sbjct: 63 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 122
Query: 468 EDV 470
E+V
Sbjct: 123 EEV 125
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 80 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 139
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 140 VNYEEFVQMM 149
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 17 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 76
Query: 486 SSHLSD---KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-K 519
+ + D + IR + + L EVDEM REA I
Sbjct: 77 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 136
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 137 DGQVNYEEFVQMM 149
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 136
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 137 VNYEEFVQMM 146
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 486 SSHLSD---KHHIRLEWMI-------------IVLIMI---------EVDEMYREAPI-K 519
+ + D + IR + + + +M EVDEM REA I
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 134 DGQVNYEEFVQMM 146
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 366 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 421
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 376 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 435
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 436 VNYEEFVQMM 445
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 77/123 (62%), Gaps = 4/123 (3%)
Query: 352 NVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE---- 407
N + QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E
Sbjct: 300 NTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 359
Query: 408 APGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTD 467
G I+F FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TD
Sbjct: 360 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 419
Query: 468 EDV 470
E+V
Sbjct: 420 EEV 422
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 377 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 436
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 437 VNYEEFVQMM 446
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
Query: 486 SSHLSD---KHHIRLEWMI-------------IVLIMI---------EVDEMYREAPI-K 519
+ + D + IR + + + +M EVDEM REA I
Sbjct: 374 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 433
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 434 DGQVNYEEFVQMM 446
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 77/123 (62%), Gaps = 4/123 (3%)
Query: 352 NVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE---- 407
N + QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E
Sbjct: 263 NTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 322
Query: 408 APGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTD 467
G I+F FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TD
Sbjct: 323 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 382
Query: 468 EDV 470
E+V
Sbjct: 383 EEV 385
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 340 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 399
Query: 412 INFTMFLTL 420
+N+ F+ +
Sbjct: 400 VNYEEFVQM 408
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 277 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 336
Query: 486 SSHLSD---KHHIRLEWMI-------------IVLIMI---------EVDEMYREAPI-K 519
+ + D + IR + + + +M EVDEM REA I
Sbjct: 337 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 396
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 397 DGQVNYEEFVQMM 409
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 77/123 (62%), Gaps = 4/123 (3%)
Query: 352 NVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE---- 407
N + QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E
Sbjct: 301 NTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 360
Query: 408 APGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTD 467
G I+F FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TD
Sbjct: 361 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 420
Query: 468 EDV 470
E+V
Sbjct: 421 EEV 423
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 378 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 437
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 438 VNYEEFVQMM 447
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 315 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 374
Query: 486 SSHLSD---KHHIRLEWMI-------------IVLIMI---------EVDEMYREAPI-K 519
+ + D + IR + + + +M EVDEM REA I
Sbjct: 375 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 434
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 435 DGQVNYEEFVQMM 447
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 273 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 332
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 333 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 388
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 343 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 402
Query: 412 INFTMFLTL 420
+N+ F+ +
Sbjct: 403 VNYEEFVQM 411
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 280 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 339
Query: 486 SSHLSD---KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-K 519
+ + D + IR + + L EVDEM REA I
Sbjct: 340 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 399
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 400 DGQVNYEEFVQMM 412
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 77/123 (62%), Gaps = 4/123 (3%)
Query: 352 NVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE---- 407
N + QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E
Sbjct: 300 NTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 359
Query: 408 APGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTD 467
G I+F FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TD
Sbjct: 360 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 419
Query: 468 EDV 470
E+V
Sbjct: 420 EEV 422
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 377 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 436
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 437 VNYEEFVQMM 446
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
Query: 486 SSHLSD---KHHIRLEWMI-------------IVLIMI---------EVDEMYREAPI-K 519
+ + D + IR + + + +M EVDEM REA I
Sbjct: 374 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 433
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 434 DGQVNYEEFVQMM 446
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 122
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +GFI +L ++ +LG+ TD+ ++ M+ E+ G
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQ 136
Query: 412 INFTMFLTL 420
+N+ F+T+
Sbjct: 137 VNYEEFVTM 145
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 66 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 121
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +GFI +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 76 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 135
Query: 412 INFTMFLTL 420
+N+ F+T+
Sbjct: 136 VNYEEFVTM 144
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 486 SSHLSD---KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-K 519
+ + D + IR + + L EVDEM REA I
Sbjct: 73 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 132
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF ++
Sbjct: 133 DGQVNYEEFVTMM 145
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 273 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 332
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 333 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 388
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 343 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 402
Query: 412 INFTMFLTL 420
+N+ F+ +
Sbjct: 403 VNYEEFVQM 411
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 280 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 339
Query: 486 SSHLSD---KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-K 519
+ + D + IR + + L EVDEM REA I
Sbjct: 340 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 399
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 400 DGQVNYEEFVQMM 412
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 66 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 121
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +GFI +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 76 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 135
Query: 412 INFTMFLTL 420
+N+ F+T+
Sbjct: 136 VNYEEFVTM 144
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 486 SSHLSD---KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-K 519
+ + D + IR + + L EVDEM REA I
Sbjct: 73 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 132
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF ++
Sbjct: 133 DGQVNYEEFVTMM 145
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 122
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +GFI +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 136
Query: 412 INFTMFLTL 420
+N+ F+T+
Sbjct: 137 VNYEEFVTM 145
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 486 SSHLSD---KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-K 519
+ + D + IR + + L EVDEM REA I
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF ++
Sbjct: 134 DGQVNYEEFVTMM 146
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 122
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +GFI +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 136
Query: 412 INFTMFLTL 420
+N+ F+T+
Sbjct: 137 VNYEEFVTM 145
Score = 28.5 bits (62), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 486 SSHLSD---KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-K 519
+ + D + IR + + L EVDEM REA I
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF ++
Sbjct: 134 DGQVNYEEFVTMM 146
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 64 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 119
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 74 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 133
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 134 VNYEEFVQMM 143
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70
Query: 486 SSHLSD---KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-K 519
+ + D + IR + + L EVDEM REA I
Sbjct: 71 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 130
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 131 DGQVNYEEFVQMM 143
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 79/123 (64%), Gaps = 7/123 (5%)
Query: 355 AMFDQ---AQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE---- 407
+M DQ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E
Sbjct: 1 SMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 60
Query: 408 APGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTD 467
G I+F FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TD
Sbjct: 61 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 120
Query: 468 EDV 470
E+V
Sbjct: 121 EEV 123
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 78 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 137
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 138 VNYEEFVQMM 147
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 15 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 74
Query: 486 SSHLSD---KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-K 519
+ + D + IR + + L EVDEM REA I
Sbjct: 75 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 134
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 135 DGQVNYEEFVQMM 147
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 64 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 119
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 74 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 133
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 134 VNYEEFVQMM 143
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70
Query: 486 SSHLSD---KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-K 519
+ + D + IR + + L EVDEM REA I
Sbjct: 71 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 130
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 131 DGQVNYEEFVQMM 143
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 136
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 137 VNYEEFVQMM 146
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 35/137 (25%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 486 SSHLSD---KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-K 519
+ + D + IR + + L EVDEM REA I
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133
Query: 520 NGMFDYIEFTRILKHGA 536
+G +Y EF +++ A
Sbjct: 134 DGQVNYEEFVQMMTAKA 150
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 66 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 121
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 76 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQ 135
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 136 VNYEEFVQMM 145
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 486 SSHLSD---KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-K 519
+ + D + IR + + L EVDEM REA I
Sbjct: 73 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDG 132
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 133 DGQVNYEEFVQMM 145
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 65
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 66 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 121
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 76 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 135
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 136 VNYEEFVQMM 145
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 77/123 (62%), Gaps = 4/123 (3%)
Query: 352 NVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE---- 407
N + QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E
Sbjct: 300 NTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 359
Query: 408 APGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTD 467
G I+F FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TD
Sbjct: 360 GDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 419
Query: 468 EDV 470
E+V
Sbjct: 420 EEV 422
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G +N+ F+
Sbjct: 384 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 443
Query: 419 TLF 421
+
Sbjct: 444 QMM 446
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 3 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 62
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 63 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 118
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 73 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 132
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 133 VNYEEFVQMM 142
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 10 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 69
Query: 486 SSHLSD---KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-K 519
+ + D + IR + + L EVDEM REA I
Sbjct: 70 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 129
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 130 DGQVNYEEFVQMM 142
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 136
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 137 VNYEEFVQMM 146
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 486 SSHLSD---KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-K 519
+ + D + IR + + L EVDEM REA I
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 134 DGQVNYEEFVQMM 146
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 62 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 117
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 72 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 131
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 132 VNYEEFVQMM 141
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 9 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 68
Query: 486 SSHLSD---KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-K 519
+ + D + IR + + L EVDEM REA I
Sbjct: 69 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 128
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 129 DGQVNYEEFVQMM 141
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 136
Query: 412 INFTMFLTLFGDRL 425
+N+ F+ + +L
Sbjct: 137 VNYEEFVQMMTAKL 150
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 486 SSHLSD---KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-K 519
+ + D + IR + + L EVDEM REA I
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 134 DGQVNYEEFVQMM 146
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 12 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 71
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 72 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 127
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 82 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 141
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 142 VNYEEFVQMM 151
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 19 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 78
Query: 486 SSHLSD---KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-K 519
+ + D + IR + + L EVDEM REA I
Sbjct: 79 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 138
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 139 DGQVNYEEFVQMM 151
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 66 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 121
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 76 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 135
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 136 VNYEEFVQMM 145
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 486 SSHLSD---KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-K 519
+ + D + IR + + L EVDEM REA I
Sbjct: 73 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 132
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 133 DGQVNYEEFVQMM 145
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQ 136
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 137 VNYEEFVQMM 146
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 366 PEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 421
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G +N+ F+
Sbjct: 383 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 442
Query: 419 TLF 421
+
Sbjct: 443 QMM 445
Score = 28.5 bits (62), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE 473
K AF FD+D G I + L ++ S+G T+ +D++NE
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE 354
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 367 PEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G +N+ F+
Sbjct: 384 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 443
Query: 419 TLF 421
+
Sbjct: 444 QMM 446
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCLELVDLLS-- 486
K AF FD+D G I + L ++ S+G T+ +D++NE N ++ + L+
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
Query: 487 ----SHLSDKHHIRLEWMI-------------IVLIMI---------EVDEMYREAPI-K 519
+ + IR + + + +M EVDEM REA I
Sbjct: 374 ARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 433
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 434 DGQVNYEEFVQMM 446
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 66 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 121
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 76 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 135
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 136 VNYEEFVQMM 145
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 486 SSHLSD---KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-K 519
+ + D + IR + + L EVDEM REA I
Sbjct: 73 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 132
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 133 DGQVNYEEFVQMM 145
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 366 PEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 421
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G +N+ F+
Sbjct: 383 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 442
Query: 419 TLF 421
+
Sbjct: 443 QMM 445
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE 473
K AF FD+D G I + L ++ S+G T+ +D++NE
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE 354
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 64 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 119
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 74 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 133
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 134 VNYEEFVQMM 143
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70
Query: 486 SSHLSD---KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-K 519
+ + D + IR + + L EVDEM REA I
Sbjct: 71 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 130
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 131 DGQVNYEEFVQMM 143
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 5 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 64
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 65 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 120
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 75 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 134
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 135 VNYEEFVQMM 144
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 12 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 71
Query: 486 SSHLSD---KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-K 519
+ + D + IR + + L EVDEM REA I
Sbjct: 72 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 131
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 132 DGQVNYEEFVQMM 144
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 44/177 (24%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTM 416
QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 9 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 417 FLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLN 476
FL L +++ TD E+ +K AF FD+D +G I+ LR ++T++G++ TDE
Sbjct: 69 FLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE-------- 120
Query: 477 HCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYREAPIK-NGMFDYIEFTRIL 532
EVDEM REA + +G +Y EF +++
Sbjct: 121 -------------------------------EVDEMIREADVDGDGQINYDEFVKVM 146
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + KEAF + D++++GFI +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 77 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ 136
Query: 412 INFTMFLTL 420
IN+ F+ +
Sbjct: 137 INYDEFVKV 145
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 44/177 (24%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTM 416
QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 9 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 417 FLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLN 476
FL L +++ TD E+ +K AF FD+D +G I+ LR ++T++G++ TDE
Sbjct: 69 FLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE-------- 120
Query: 477 HCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYREAPIK-NGMFDYIEFTRIL 532
EVDEM REA + +G +Y EF +++
Sbjct: 121 -------------------------------EVDEMIREADVDGDGQINYEEFVKVM 146
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + KEAF + D++++GFI +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 77 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ 136
Query: 412 INFTMFLTL 420
IN+ F+ +
Sbjct: 137 INYEEFVKV 145
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 44/177 (24%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTM 416
QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 417 FLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLN 476
FL L +++ TD E+ +K AF FD+D +G I+ LR ++T++G++ TDE
Sbjct: 68 FLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE-------- 119
Query: 477 HCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYREAPI-KNGMFDYIEFTRIL 532
EVDEM REA + +G +Y EF +++
Sbjct: 120 -------------------------------EVDEMIREADVDGDGQVNYEEFVQVM 145
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + KEAF + D++ +GFI +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 76 MKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ 135
Query: 412 INFTMFLTL 420
+N+ F+ +
Sbjct: 136 VNYEEFVQV 144
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTM 416
QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 300 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPE 359
Query: 417 FLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FL + +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 360 FLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 413
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 368 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 427
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 428 VNYEEFVQMM 437
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTM 416
QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 5 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 64
Query: 417 FLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FL L +++ TD E+ +K AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 65 FLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 118
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + KEAF + D++ +GFI +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 73 MKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ 132
Query: 412 INFTMFLTL 420
+N+ F+ +
Sbjct: 133 VNYEEFVQV 141
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E ++L+
Sbjct: 10 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 69
Query: 486 SSHLSD-------KHHIRL------------EWMIIV------LIMIEVDEMYREAPI-K 519
+ + D K R+ E ++ L EVDEM REA +
Sbjct: 70 ARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDG 129
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 130 DGQVNYEEFVQVM 142
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 44/177 (24%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTM 416
QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 417 FLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLN 476
FL L +++ TD E+ +K AF FD+D +G I+ LR ++T++G++ TDE
Sbjct: 68 FLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE-------- 119
Query: 477 HCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYREAPI-KNGMFDYIEFTRIL 532
EVDEM REA + +G +Y EF +++
Sbjct: 120 -------------------------------EVDEMIREADVDGDGQVNYEEFVQVM 145
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + KEAF + D++ +GFI +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 76 MKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ 135
Query: 412 INFTMFLTL 420
+N+ F+ +
Sbjct: 136 VNYEEFVQV 144
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTM 416
QI FKEAF++ D++ DG I + L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 309 QIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQ 368
Query: 417 FLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF F +D +G I+ +LR ++T++G++ TDE+V
Sbjct: 369 FLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEV 422
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAP----GP 411
M D + +EAF + ++ +G+I L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 377 MKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQ 436
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 437 VNYEQFVQMM 446
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 75/116 (64%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G+ TDE+V
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEV 122
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 77 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQ 136
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 137 VNYEEFVQMM 146
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 486 SSHLSD---KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-K 519
+ + D + IR + + L EVDEM REA I
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDG 133
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 134 DGQVNYEEFVQMM 146
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 75/116 (64%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G+ TDE+V
Sbjct: 66 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEV 121
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 76 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQ 135
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 136 VNYEEFVQMM 145
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 35/133 (26%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 486 SSHLSD---KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-K 519
+ + D + IR + + L EVDEM REA I
Sbjct: 73 ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDG 132
Query: 520 NGMFDYIEFTRIL 532
+G +Y EF +++
Sbjct: 133 DGQVNYEEFVQMM 145
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 76/123 (61%), Gaps = 4/123 (3%)
Query: 352 NVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE---- 407
N + QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E
Sbjct: 300 NTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 359
Query: 408 APGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTD 467
G I+F FLT+ ++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TD
Sbjct: 360 GNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 419
Query: 468 EDV 470
E+V
Sbjct: 420 EEV 422
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 377 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 436
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 437 VNYEEFVQMM 446
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 74/116 (63%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI +FKEAF + D++ DG I E+L ++ SL +NPT++ L+ M+ E G I F
Sbjct: 6 EEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEF 65
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FL+L +++ TD E+ +K AF FD+D +G I+ LR ++ ++G++ TDE+V
Sbjct: 66 DEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEV 121
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ KEAF + D++++G+I +L ++ +LG+ TD+ +E M+ EA G +N+ F+
Sbjct: 83 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 142
Query: 419 TLF 421
+
Sbjct: 143 KMM 145
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMN 472
K AFG FD+D G I E L ++ S+ T+E++ +
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQD 50
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 5/116 (4%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 62 PEFLTMMARKMKDTDSEE-IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 116
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G +N+ F+
Sbjct: 78 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFV 137
Query: 419 TL 420
+
Sbjct: 138 QM 139
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 34/132 (25%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCLELVDLLSSH 488
K AF FD+D G I + L ++ S+G T+ +D++NE N ++ + L+
Sbjct: 9 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 68
Query: 489 L-----SDKHHIRLEWMII----------------------VLIMIEVDEMYREAPI-KN 520
+D IR + + L EVDEM REA I +
Sbjct: 69 ARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGD 128
Query: 521 GMFDYIEFTRIL 532
G +Y EF +++
Sbjct: 129 GQVNYEEFVQMM 140
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 72/116 (62%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ Q+ FKEAF++ D++ DG I +L ++ SLG+NPT+ L MM E G ++F
Sbjct: 6 EEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDF 65
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FL + +++ TD E+ I+ AF FD+D +G ++ LR ++T +G++ +DE+V
Sbjct: 66 PEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEV 121
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +GF+ +L ++ LG+ +D+ ++ M+ A G
Sbjct: 76 MKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQ 135
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 136 VNYEEFVRVL 145
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 75/116 (64%), Gaps = 6/116 (5%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ +++ D E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 66 PEFLTMMARKMK--DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 119
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ +EAF + D++ +GFI +L ++ +LG+ TD+ ++ M+ EA G +N+ F+
Sbjct: 81 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 140
Query: 419 TL 420
T+
Sbjct: 141 TM 142
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 33/131 (25%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCL---ELVDLL 485
K AF FD+D G I + L ++ S+G T+ +D++NE N + E + ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 486 SSHLSD-KHHIRLEWMII----------------------VLIMIEVDEMYREAPI-KNG 521
+ + D + IR + + L EVDEM REA I +G
Sbjct: 73 ARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 132
Query: 522 MFDYIEFTRIL 532
+Y EF ++
Sbjct: 133 QVNYEEFVTMM 143
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 44/179 (24%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF + D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 6 EEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEK 474
FL+L +++ D E+ + AF FD D +G+I+ LR ++T++G++ TD+
Sbjct: 66 PEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDD------ 119
Query: 475 LNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYREAPI-KNGMFDYIEFTRIL 532
EVDEM REA I +G +Y EF R++
Sbjct: 120 ---------------------------------EVDEMIREADIDGDGHINYEEFVRMM 145
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M +Q + EAF + D++ +G I +L ++ +LG+ TDD ++ M+ EA G
Sbjct: 76 MKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGH 135
Query: 412 INFTMFLTLF 421
IN+ F+ +
Sbjct: 136 INYEEFVRMM 145
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 44/179 (24%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF + D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 6 EEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEK 474
FL+L +++ D E+ + AF FD D +G+I+ LR ++T++G++ TD+
Sbjct: 66 PEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDD------ 119
Query: 475 LNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYREAPI-KNGMFDYIEFTRIL 532
EVDEM REA I +G +Y EF R++
Sbjct: 120 ---------------------------------EVDEMIREADIDGDGHINYEEFVRMM 145
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M +Q + EAF + D++ +G I +L ++ +LG+ TDD ++ M+ EA G
Sbjct: 76 MKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGH 135
Query: 412 INFTMFLTLF 421
IN+ F+ +
Sbjct: 136 INYEEFVRMM 145
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 71/116 (61%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L + SLG+NPT+ L+ + E G I+F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDF 66
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT + + TD E+ I+ AF FD+D +G I+ LR + T++G++ TDE+V
Sbjct: 67 PEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEV 122
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ +EAF + D++ +G+I +L + +LG+ TD+ ++ + EA G +N+ F+
Sbjct: 84 EEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEFV 143
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 71/116 (61%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L + SLG+NPT+ L+ + E G I+F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDF 65
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT + + TD E+ I+ AF FD+D +G I+ LR + T++G++ TDE+V
Sbjct: 66 PEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEV 121
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ +EAF + D++ +G+I +L + +LG+ TD+ ++ + EA G +N+ F+
Sbjct: 83 EEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFV 142
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 78.2 bits (191), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/116 (39%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAP----GPINF 414
+ QI FKEAF++ D++ DG I ++L + SLG NPT+ L+ + E G INF
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINF 65
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT + TD E+ I+ AF FD+D +G I+ LR + T++G++ TDE+V
Sbjct: 66 PEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEV 121
Score = 30.0 bits (66), Expect = 3.0, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 358 DQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPIN 413
D + +EAF + D++ +G+I +L + +LG+ TD+ ++ + EA G +N
Sbjct: 78 DTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVN 137
Query: 414 FTMFL 418
+ F+
Sbjct: 138 YEEFV 142
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAP----GPINF 414
+ QI FK+AF D+ G I +L ++ +LG+NPT+ L+ ++ EA G +NF
Sbjct: 6 EEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNF 65
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
T F + +++ TD E+ ++ AF FD D G I+ LR ++ ++G++ TDE++
Sbjct: 66 TEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEI 121
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ +EAF + D++ DGFI +L ++ +LG+ TD+ ++ M+ EA G IN+ F+
Sbjct: 83 EEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFV 142
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 73.2 bits (178), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAP----GPINFTM 416
Q+ FKEAF + D R GFI KE L +L G M EA G I F
Sbjct: 4 QVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPE 63
Query: 417 FLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRF 465
FL++ G R++ T ED+++ AF FD + +G I + L++ L ++GDR
Sbjct: 64 FLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRL 112
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTM 416
QI FKEAF + D++ +G I +L ++ SLG +P++ + +M E I F+
Sbjct: 9 QIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSE 68
Query: 417 FLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FL L +L+ D E + AF FD++ G+I+ L+ +LTS+G++ TD +V
Sbjct: 69 FLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEV 122
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE---APGPINFTMFLT 419
Q EAF + D+N DG I +L +L S+G+ TD ++ M+ E G IN F
Sbjct: 84 QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVSDGSGEINIQQFAA 143
Query: 420 LF 421
L
Sbjct: 144 LL 145
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTM 416
QI FKEAF + D++ +G I +L ++ SLG +P++ + +M E I F+
Sbjct: 8 QIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSE 67
Query: 417 FLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FL L +L+ D E + AF FD++ G+I+ L+ +LTS+G++ TD +V
Sbjct: 68 FLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEV 121
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE---APGPINFTMFLT 419
Q EAF + D+N DG I +L +L S+G+ TD ++ M+ E G IN F
Sbjct: 83 QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVSDGSGEINIQQFAA 142
Query: 420 LF 421
L
Sbjct: 143 LL 144
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTM 416
QI FKEAF + D++ G I +L ++ SLG +P++ + +M E I F+
Sbjct: 9 QIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSE 68
Query: 417 FLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FL L +L+ D E + AF FD++ G+I+ L+ +LTS+G++ TD +V
Sbjct: 69 FLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEV 122
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE---APGPINFTMFLT 419
Q EAF + D+N DG I +L +L S+G+ TD ++ M+ E G IN F
Sbjct: 84 QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVSDGSGEINIKQFAA 143
Query: 420 LF 421
L
Sbjct: 144 LL 145
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 66/116 (56%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF + D++ +G I +L ++ SLG +P++ + +M E I F
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
+ FL L +L+ D E + AF FD++ G+I+ L+ +LTS+G++ TD ++
Sbjct: 66 SEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEL 121
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ Q Q +EAF++ D + G ID ++L + +LG P + ++ M+ E G I+F
Sbjct: 24 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDF 83
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ ++ D + I AF FD+DNSG I + LR + +G+ T+E++
Sbjct: 84 EEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEEL 139
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 368 AFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA 408
AF + D + G I +DL + LG+N T++ L+ M+ EA
Sbjct: 106 AFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEA 146
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 81/172 (47%), Gaps = 45/172 (26%)
Query: 365 FKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGPINFTMFLTLFGDR 424
+K+AF++ D++ G I K + D+L + G+NPT + + P ++ FL + +R
Sbjct: 7 YKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQFLQVL-NR 65
Query: 425 LQG----TDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLE 480
G DPE+ +K F FD+D +G+I LR +LTS+G++ ++E
Sbjct: 66 PNGFDMPGDPEEFVK-GFQVFDKDATGMIGVGELRYVLTSLGEKLSNE------------ 112
Query: 481 LVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYREAPIKNGMFDYIEFTRIL 532
E+DE+ + P+K+GM +Y +F +++
Sbjct: 113 ---------------------------EMDELLKGVPVKDGMVNYHDFVQMI 137
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAF 438
FLT+ +++ TD E+ I+ AF
Sbjct: 66 PEFLTMMARKMKDTDSEEEIREAF 89
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLG----KNPTDDYLEGMMGEAPGPINF 414
+ Q Q EAF++ D N DGF+D +L + +LG K D ++ E + +
Sbjct: 19 EEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKY 78
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
F + G+++ DP D IK AF FD+D++G I+ + LR + +G+ TDE++
Sbjct: 79 DDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEEL 134
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ Q Q +EAF++ D + G ID ++L + +LG P + ++ M+ E G +NF
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 61
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FLT+ ++ D ++ I AF FD+D +G I+ + L+ + +G+ TDE++
Sbjct: 62 GDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEEL 117
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 17/149 (11%)
Query: 357 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPG------ 410
F++ Q++ FKEAF + D+ DG I D++ +LG+NPT+ + ++G
Sbjct: 4 FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSR 63
Query: 411 PINFTMFLTLF----GDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFT 466
++F FL + +R QGT ED ++ F FD++ +G + LR +LT++G++ T
Sbjct: 64 RVDFETFLPMLQAVAKNRGQGT-YEDYLE-GFRVFDKEGNGKVMGAELRHVLTTLGEKMT 121
Query: 467 DEDV-----MNEKLNHCLELVDLLSSHLS 490
+E+V +E N C+ L LS
Sbjct: 122 EEEVETVLAGHEDSNGCINYEAFLKHILS 150
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLG----KNPTDDYLEGMMGEAPGPINF 414
+ Q Q EAF++ D N DGF+D +L +LG K D ++ E +
Sbjct: 19 EEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKY 78
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
F + G+++ DP D IK AF FD+D++G I+ + LR + +G+ TDE++
Sbjct: 79 DDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEEL 134
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
Query: 360 AQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGP-INFTMFL 418
A +E F + D++ DG + E+L L SLGKNPT+ L + G+ + F
Sbjct: 2 ASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFK 61
Query: 419 TLFGDRLQG-TDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
T++ ++ T+ + +AF D++ +G I E LR+LL ++GD T +V
Sbjct: 62 TVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEV 114
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTM 416
Q + +AF +D+ +G I + +L +L +LG T +E +M E G IN+
Sbjct: 74 QSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYES 133
Query: 417 FLTLF 421
F+ +
Sbjct: 134 FVDML 138
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 7/123 (5%)
Query: 355 AMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APG 410
A + I FK AF+M D + G I ++L ++ LG+NPT + L+ ++ E G
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71
Query: 411 PINFTMFLTLFGDRLQ---GTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTD 467
I+F FL + +++ E+ + N F FD++ G I+ E L E+L + G+ T+
Sbjct: 72 TIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTE 131
Query: 468 EDV 470
ED+
Sbjct: 132 EDI 134
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Query: 369 FNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFLTL 420
F + D+N DGFID E+L ++L + G++ T++ +E +M ++ G I+F FL +
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKM 157
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 7/123 (5%)
Query: 355 AMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APG 410
A + I FK AF+M D + G I ++L ++ LG+NPT + L+ ++ E G
Sbjct: 9 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 68
Query: 411 PINFTMFLTLFGDRLQ---GTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTD 467
I+F FL + +++ E+ + N F FD++ G I+ E L E+L + G+ T+
Sbjct: 69 TIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTE 128
Query: 468 EDV 470
ED+
Sbjct: 129 EDI 131
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Query: 369 FNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFLTL 420
F + D+N DGFID E+L ++L + G++ T++ +E +M ++ G I+F FL +
Sbjct: 99 FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKM 154
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ Q Q +EAF++ D + G ID ++L + +LG P + ++ M+ + G I+F
Sbjct: 4 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDF 63
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
FL + ++ D + I AF FD+D +G I+ + L+ + +G+ TDE++
Sbjct: 64 EEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEEL 119
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
Query: 355 AMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APG 410
A + I FK AF+M D + G I ++L ++ LG+NPT + L+ ++ E G
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71
Query: 411 PINFTMFLTLFGDRLQ---GTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTD 467
I+F FL + +++ E+ +++ F FD++ G I+ E L E+L + G+ T+
Sbjct: 72 TIDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTE 131
Query: 468 EDV 470
ED+
Sbjct: 132 EDI 134
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ ++ F + D+N DGFID E+L ++L + G++ T++ +E +M ++ G I+F FL
Sbjct: 96 EELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFL 155
Query: 419 TL 420
+
Sbjct: 156 KM 157
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 7/123 (5%)
Query: 355 AMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APG 410
A + I FK AF+M D + G I ++L ++ LG+NPT + L+ ++ E G
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71
Query: 411 PINFTMFLTLFGDRLQ---GTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTD 467
I+F FL + +++ E+ + + F FD++ G I+ E L E+L + G+ T+
Sbjct: 72 TIDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTE 131
Query: 468 EDV 470
ED+
Sbjct: 132 EDI 134
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ + F + D+N DGFID E+L ++L + G++ T++ +E +M ++ G I+F FL
Sbjct: 96 EELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFL 155
Query: 419 TL 420
+
Sbjct: 156 KM 157
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 7/123 (5%)
Query: 355 AMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APG 410
A + I FK AF+M D + G I ++L ++ LG+NPT + L+ ++ E G
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71
Query: 411 PINFTMFLTLFGDRLQ---GTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTD 467
I+F FL + +++ E+ + N F FD++ G I+ E L E+L + G+ +
Sbjct: 72 TIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIE 131
Query: 468 EDV 470
ED+
Sbjct: 132 EDI 134
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 369 FNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFLTL 420
F + D+N DGFID E+L ++L + G++ ++ +E +M ++ G I+F FL +
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKM 157
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 19/138 (13%)
Query: 357 FDQAQIQNFKEAFNMID--QNRDGFIDKEDLHDMLASLGKNPTDDYLEGM-----MGEAP 409
Q +I + K+ F + D RDG +D L D+ LG NP ++ + + MGE
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKS 62
Query: 410 GPINFTMFLTLFG---DRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFT 466
P F FL + D QGT + + AF FD + G I+ LR +LT++G+R +
Sbjct: 63 LP--FEEFLPAYEGLMDCEQGTFADYM--EAFKTFDREGQGFISGAELRHVLTALGERLS 118
Query: 467 DEDVMNEKLNHCLELVDL 484
DEDV + ++L DL
Sbjct: 119 DEDV-----DEIIKLTDL 131
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTM 416
QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 417 FLTLFGDRLQGTD 429
FLT+ +++ TD
Sbjct: 68 FLTMMARKMKDTD 80
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 53.9 bits (128), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 19/138 (13%)
Query: 357 FDQAQIQNFKEAFNMID--QNRDGFIDKEDLHDMLASLGKNPTDDYLEGM-----MGEAP 409
Q +I + K+ F + D RDG +D L D+ LG NP ++ + + MGE
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKS 62
Query: 410 GPINFTMFLTLFG---DRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFT 466
P F FL + D QGT + + AF FD + G I+ LR +LT++G+R +
Sbjct: 63 LP--FEEFLPAYEGLMDCEQGTFADYM--EAFKTFDREGQGFISGAELRHVLTALGERLS 118
Query: 467 DEDVMNEKLNHCLELVDL 484
DEDV + ++L DL
Sbjct: 119 DEDV-----DEIIKLTDL 131
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 53.9 bits (128), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 19/138 (13%)
Query: 357 FDQAQIQNFKEAFNMID--QNRDGFIDKEDLHDMLASLGKNPTDDYLEGM-----MGEAP 409
Q +I + K+ F + D RDG +D L D+ LG NP ++ + + MGE
Sbjct: 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKS 60
Query: 410 GPINFTMFLTLFG---DRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFT 466
P F FL + D QGT + + AF FD + G I+ LR +LT++G+R +
Sbjct: 61 LP--FEEFLPAYEGLMDCEQGTFADYM--EAFKTFDREGQGFISGAELRHVLTALGERLS 116
Query: 467 DEDVMNEKLNHCLELVDL 484
DEDV + ++L DL
Sbjct: 117 DEDV-----DEIIKLTDL 129
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 53.9 bits (128), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 359 QAQIQNFKEAFNMID--QNRDGFIDKEDLHDMLASLGKNPTDDYLEGM-----MGEAPGP 411
Q +I + K+ F + D RDG +D L D+ LG NP ++ + + MGE P
Sbjct: 2 QDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLP 61
Query: 412 INFTMFLTLFG---DRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDE 468
F FL + D QGT + + AF FD + G I+ LR +LT++G+R +DE
Sbjct: 62 --FEEFLPAYEGLMDCEQGTFADYM--EAFKTFDREGQGFISGAELRHVLTALGERLSDE 117
Query: 469 DVMNEKLNHCLELVDL 484
DV + ++L DL
Sbjct: 118 DV-----DEIIKLTDL 128
Score = 30.0 bits (66), Expect = 3.4, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 358 DQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDD 399
+Q ++ EAF D+ GFI +L +L +LG+ +D+
Sbjct: 76 EQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDE 117
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 53.9 bits (128), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 359 QAQIQNFKEAFNMID--QNRDGFIDKEDLHDMLASLGKNPTDDYLEGM-----MGEAPGP 411
Q +I + K+ F + D RDG +D L D+ LG NP ++ + + MGE P
Sbjct: 2 QDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLP 61
Query: 412 INFTMFLTLFG---DRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDE 468
F FL + D QGT + + AF FD + G I+ LR +LT++G+R +DE
Sbjct: 62 --FEEFLPAYEGLMDCEQGTFADYM--EAFKTFDREGQGFISGAELRHVLTALGERLSDE 117
Query: 469 DVMNEKLNHCLELVDL 484
DV + ++L DL
Sbjct: 118 DV-----DEIIKLTDL 128
Score = 30.0 bits (66), Expect = 3.6, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 358 DQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDD 399
+Q ++ EAF D+ GFI +L +L +LG+ +D+
Sbjct: 76 EQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDE 117
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 15/148 (10%)
Query: 357 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPG------ 410
F + Q FKEAF + D+ DG I D++ +LG+NPT+ + ++G
Sbjct: 1 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 60
Query: 411 PINFTMFLTLFGDRLQGTDP---EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTD 467
+ F FL + + D ED ++ FD++ +G + +R +L ++G++ T+
Sbjct: 61 TLKFEQFLPMMQTIAKNKDQGCFEDYVE-GLRVFDKEGNGTVMGAEIRHVLVTLGEKMTE 119
Query: 468 EDV-----MNEKLNHCLELVDLLSSHLS 490
E+V +E N C+ +L+ LS
Sbjct: 120 EEVEQLVAGHEDSNGCINYEELVRMVLS 147
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTM 416
QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPE 67
Query: 417 FLTLFGDRLQGT 428
FLT+ +++ T
Sbjct: 68 FLTMMARKMKDT 79
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTM 416
QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 417 FLTLFGDRLQGT 428
FLT+ +++ T
Sbjct: 68 FLTMMARKMKDT 79
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 17/149 (11%)
Query: 357 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPG------ 410
F + Q FKEAF + D+ DG I D++ +LG+NPT+ + ++G
Sbjct: 3 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 62
Query: 411 PINFTMFL----TLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFT 466
+ F FL T+ ++ QG ED ++ FD++ +G + +R +L ++G++ T
Sbjct: 63 TLKFEQFLPMMQTIAKNKDQGC-FEDYVE-GLRVFDKEGNGTVMGAEIRHVLVTLGEKMT 120
Query: 467 DEDV-----MNEKLNHCLELVDLLSSHLS 490
+E+V +E N C+ +L+ LS
Sbjct: 121 EEEVEQLVAGHEDSNGCINYEELVRMVLS 149
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGP 411
+ + QI +FKEAF + D++ DG I E+L ++ SL +NPT++ L+ M+ E G
Sbjct: 3 ILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGT 62
Query: 412 INFTMFLTLFGDRLQGT 428
I F FL+L +++ T
Sbjct: 63 IEFDEFLSLMAKKVKDT 79
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMN 472
K AFG FD+D G I E L ++ S+ T+E++ +
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQD 50
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTM 416
QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 417 FLTLFGDRLQ 426
FLT+ +++
Sbjct: 68 FLTMMARKMK 77
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 19/138 (13%)
Query: 357 FDQAQIQNFKEAFNMID--QNRDGFIDKEDLHDMLASLGKNPTDDYLEGM-----MGEAP 409
Q +I + K+ F + RDG +D L D+ LG NP ++ + + MGE
Sbjct: 3 LSQDEIDDLKDVFELFAFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKS 62
Query: 410 GPINFTMFLTLFG---DRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFT 466
P F FL + D QGT + + AF FD + G I+ LR +LT++G+R +
Sbjct: 63 LP--FEEFLPAYEGLMDCEQGTFADYM--EAFKTFDREGQGFISGAELRHVLTALGERLS 118
Query: 467 DEDVMNEKLNHCLELVDL 484
DEDV + ++L DL
Sbjct: 119 DEDV-----DEIIKLTDL 131
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTM 416
QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 8 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 417 FLTLFGDRLQGT 428
FL L +++ T
Sbjct: 68 FLNLMARKMKDT 79
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTM 416
QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 417 FLTLFGDRL 425
FLT+ ++
Sbjct: 68 FLTMMARKM 76
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTM 416
QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 417 FLTLFGDRL 425
FLT+ ++
Sbjct: 68 FLTMMARKM 76
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTM 416
QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 8 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 417 FLTL 420
FLT+
Sbjct: 68 FLTM 71
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTM 416
QI FKEAF++ D++ DG I ++L ++ SLG+NPT+ L+ M+ E G I+F
Sbjct: 9 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 417 FLTL 420
FLT+
Sbjct: 69 FLTM 72
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGP 411
+ + QI +FKEAF + D++ DG I E+L ++ SL +NPT++ L+ M+ E G
Sbjct: 3 ILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGT 62
Query: 412 INFTMFLTLFGDRL 425
I F FL+L ++
Sbjct: 63 IEFDEFLSLMAKKV 76
Score = 28.9 bits (63), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMN 472
K AFG FD+D G I E L ++ S+ T+E++ +
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQD 50
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 49.7 bits (117), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 12/120 (10%)
Query: 357 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA------PG 410
F +A +FKEAF + D+ D I + D+ +LG+NPT+ + ++G
Sbjct: 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAA 61
Query: 411 PINFTMFLTLF----GDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFT 466
I F FL + ++ QGT ED ++ FD++ +G + LR +L ++G++ T
Sbjct: 62 AITFEEFLPMLQAAANNKDQGTF-EDFVE-GLRVFDKEGNGTVMGAELRHVLATLGEKMT 119
Score = 29.6 bits (65), Expect = 4.4, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 358 DQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMG---EAPGPINF 414
DQ ++F E + D+ +G + +L +LA+LG+ T++ +E +M ++ G IN+
Sbjct: 80 DQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQEDSNGCINY 139
Query: 415 TMFL 418
F+
Sbjct: 140 EAFV 143
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 362 IQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTMF 417
I FK AF+M D + G I ++L ++ LG+ PT + L+ ++ E G I+F F
Sbjct: 16 IAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEF 75
Query: 418 LTLFGDRLQ---GTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
L + +++ E+ + F FD + G I+ E L E+ + G+ TDE++
Sbjct: 76 LVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEI 131
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ E F + D+N DG+ID E+L ++ + G++ TD+ +E +M + G I+F FL
Sbjct: 93 EELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFL 152
Query: 419 TL 420
+
Sbjct: 153 KM 154
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 362 IQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTMF 417
I FK AF+M D + G I ++L ++ LG+ PT + L+ ++ E G I+F F
Sbjct: 16 IAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEF 75
Query: 418 LTLFGDRLQ---GTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
L + +++ E+ + F FD + G I+ E L E+ + G+ TDE++
Sbjct: 76 LVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEI 131
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ E F + D+N DG+ID E+L ++ + G++ TD+ +E +M + G I+F FL
Sbjct: 93 EELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFL 152
Query: 419 TL 420
+
Sbjct: 153 KM 154
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 359 QAQIQNFKEAFNMID--QNRDGFIDKEDLHDMLASLGKNPTDDYLEGM-----MGEAPGP 411
Q +I + KE F + D RDG +D + D+ LG NP ++ + + MGE P
Sbjct: 5 QDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFAVGGTHKMGEKSLP 64
Query: 412 INFTMFLTLFG---DRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDE 468
F FL + D QGT + AF FD + G I+ LR +L+ +G+R +DE
Sbjct: 65 --FEEFLPAYEGLMDCEQGTYAD--YMEAFKTFDREGQGFISGAELRHVLSGLGERLSDE 120
Query: 469 DV 470
+V
Sbjct: 121 EV 122
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 358 DQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDD 399
+Q ++ EAF D+ GFI +L +L+ LG+ +D+
Sbjct: 79 EQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDE 120
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 359 QAQIQNFKEAFNMID--QNRDGFIDKEDLHDMLASLGKNPTDDYLEGM-----MGEAPGP 411
Q +I + KE F + D RDG +D + D+ LG NP ++ + + MGE P
Sbjct: 6 QDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFAVGGTHKMGEKSLP 65
Query: 412 INFTMFLTLFG---DRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDE 468
F FL + D QGT + AF FD + G I+ LR +L+ +G+R +DE
Sbjct: 66 --FEEFLPAYEGLMDCEQGTYAD--YMEAFKTFDREGQGFISGAELRHVLSGLGERLSDE 121
Query: 469 DV 470
+V
Sbjct: 122 EV 123
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 358 DQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDD 399
+Q ++ EAF D+ GFI +L +L+ LG+ +D+
Sbjct: 80 EQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDE 121
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ QI FKEAF++ D++ DG I ++L ++ SLG NPT+ L+ M+ E G I+F
Sbjct: 6 EEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDF 65
Query: 415 TMFLTLFG 422
FLT+
Sbjct: 66 PEFLTMMA 73
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA------PGPI 412
+A +FKEAF + D+ D I + D+ +LG+NPT+ + ++G I
Sbjct: 2 KAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAI 61
Query: 413 NFTMFLTLF----GDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFT 466
F FL + ++ QGT ED ++ FD++ +G + LR +L ++G++ T
Sbjct: 62 TFEEFLPMLQAAANNKDQGTF-EDFVE-GLRVFDKEGNGTVMGAELRHVLATLGEKMT 117
Score = 29.6 bits (65), Expect = 4.0, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 358 DQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMG---EAPGPINF 414
DQ ++F E + D+ +G + +L +LA+LG+ T++ +E +M ++ G IN+
Sbjct: 78 DQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQEDSNGCINY 137
Query: 415 TMFL 418
F+
Sbjct: 138 EAFV 141
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 410 GPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMG 462
G I+F FLT+ +++ TD E+ I+ AF FD+D +G I+ LR ++T++G
Sbjct: 16 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 68
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 359 QAQIQNFKEAFNMID--QNRDGFIDKEDLHDMLASLGKNPTDDYLEGM-----MGEAPGP 411
Q +I + K+ F + D RDG +D L D+ LG NP ++ + + MGE P
Sbjct: 5 QDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLP 64
Query: 412 INFTMFLTLFG---DRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDE 468
F FL + D QGT + AF FD + G I+ LR +L+ +G+R +DE
Sbjct: 65 --FEEFLPAYEGLMDCEQGTFAD--YMEAFKTFDREGQGFISGAELRHVLSGLGERLSDE 120
Query: 469 DV 470
+V
Sbjct: 121 EV 122
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 358 DQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDD 399
+Q ++ EAF D+ GFI +L +L+ LG+ +D+
Sbjct: 79 EQGTFADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDE 120
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 18/119 (15%)
Query: 366 KEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGPINFTMFLTLFGDRL 425
K+ F + D+ G I K+ L D L ++G NPT+ ++ ++ A + LTL D++
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDII-NADSSLRDASSLTL--DQI 63
Query: 426 QG--------------TDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
G ED +K AF FD++++G ++ LR +LT +G++ TD +V
Sbjct: 64 TGLIEVNEKELDATTKAKTEDFVK-AFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEV 121
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPT----DDYLEGMMGEAPGPINF 414
+A+ ++F +AF + D+ G + DL ML LG+ T D+ L+G+ ++ G I++
Sbjct: 79 KAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDY 138
Query: 415 TMFL 418
F+
Sbjct: 139 KKFI 142
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 12/116 (10%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA------PGPINF 414
+I +FKEAF + D+ D I + D++ +LG+NPT+ + ++G I F
Sbjct: 2 EINDFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKITF 61
Query: 415 TMFLTLF----GDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFT 466
FL + ++ QGT ED ++ FD++ +G + LR +L ++G++ T
Sbjct: 62 EEFLPMLQAAANNKDQGT-FEDFVE-GLRVFDKEGNGTVMGAELRHVLATLGEKMT 115
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLG----KNPTDDYLEGMMGEAPGPINF 414
+ Q Q +EAF++ D + G ID ++L +LG K + + E G NF
Sbjct: 27 EEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNF 86
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVM 471
FLT+ + D ++ I AF FD+D +G I+ + L+ + +G+ TDE++
Sbjct: 87 GDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 143
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%)
Query: 424 RLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
+++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 1 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 47
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 2 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 61
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 62 VNYEEFVQMM 71
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 10/121 (8%)
Query: 359 QAQIQNFKEAFNM-IDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPIN 413
+ Q FK AF++ + DG I ++L ++ LG+NPT + L+ M+ E G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 414 FTMFLTLF----GDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDED 469
F FL + D +G E+ + + F FD++ G I+ E L+ +L + G+ T++D
Sbjct: 74 FDEFLVMMVRCMKDDSKGK-TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDD 132
Query: 470 V 470
+
Sbjct: 133 I 133
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 369 FNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
F M D+N DG+ID E+L ML + G+ T+D +E +M + G I++ FL
Sbjct: 101 FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 10/121 (8%)
Query: 359 QAQIQNFKEAFNM-IDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPIN 413
+ Q FK AF++ + DG I ++L ++ LG+NPT + L+ M+ E G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 414 FTMFLTLF----GDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDED 469
F FL + D +G E+ + + F FD++ G I+ E L+ +L + G+ T++D
Sbjct: 74 FDEFLVMMVRSMKDDSKGK-TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDD 132
Query: 470 V 470
+
Sbjct: 133 I 133
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 369 FNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
F M D+N DG+ID E+L ML + G+ T+D +E +M + G I++ FL
Sbjct: 101 FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 33/46 (71%)
Query: 425 LQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
++ TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 1 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 46
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 1 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 60
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 61 VNYEEFVQMM 70
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 10/121 (8%)
Query: 359 QAQIQNFKEAFNM-IDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPIN 413
+ Q FK AF++ + DG I ++L ++ LG+NPT + L+ M+ E G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 414 FTMFLTLF----GDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDED 469
F FL + D +G E+ + + F FD++ G I+ E L+ +L + G+ T++D
Sbjct: 74 FDEFLVMMVRSMKDDSKGKSEEE-LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDD 132
Query: 470 V 470
+
Sbjct: 133 I 133
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 369 FNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
F M D+N DG+ID E+L ML + G+ T+D +E +M + G I++ FL
Sbjct: 101 FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 361 QIQNFKEAFNMID--QNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAP-GPINFTM- 416
+I+ +E F++ D RDG +D + D+L LG NPT+ + G G + +
Sbjct: 7 EIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKMGEKAYKLE 66
Query: 417 -FLTLF---GDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMN 472
L ++ + GT ++ ++ AF FD + G+I+ +R +L +G+R T ED N
Sbjct: 67 EILPIYEEMSSKDTGTAADEFME-AFKTFDREGQGLISSAEIRNVLKMLGERIT-EDQCN 124
Query: 473 EKLNHC 478
+ C
Sbjct: 125 DIFTFC 130
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 428 TDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 43
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G +N+ F+
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 419 TLF 421
+
Sbjct: 65 QMM 67
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 428 TDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 43
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G +N+ F+
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 419 TLF 421
+
Sbjct: 65 QMM 67
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 428 TDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 2 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 44
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G +N+ F+
Sbjct: 6 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 65
Query: 419 TLF 421
+
Sbjct: 66 QMM 68
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 64/121 (52%), Gaps = 10/121 (8%)
Query: 359 QAQIQNFKEAFNM-IDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPIN 413
+ Q FK AF++ + DG I ++L ++ LG+NPT + L+ M+ E G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 414 FTMFLTLF----GDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDED 469
F FL + D +G E+ + + F FD++ G I+ + L+ +L + G+ T++D
Sbjct: 74 FDEFLVMMVRSMKDDSKGKSEEE-LSDLFRMFDKNADGYIDLDELKIMLQATGETITEDD 132
Query: 470 V 470
+
Sbjct: 133 I 133
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMM 405
+ + F M D+N DG+ID ++L ML + G+ T+D +E +M
Sbjct: 95 EELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELM 137
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 428 TDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
TD E+ +K AF FD+D +G I+ LR ++ ++G++ TDE+V
Sbjct: 5 TDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEV 47
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ KEAF + D++++G+I +L ++ +LG+ TD+ +E M+ EA G +N+ F+
Sbjct: 9 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 68
Query: 419 TLF 421
+
Sbjct: 69 KMM 71
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYL----EGMMGEAPGPINFTM 416
+I+ +EAF D+++DG+I+ DL + + ++G PT+ L + + G ++F
Sbjct: 9 EIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDD 68
Query: 417 FLTLFGDRLQGTDPEDV----IKNAFGCFDEDNSGIINEERLRELLTSM 461
F+ L G +L + + +++AF FD + G I+ LRE + ++
Sbjct: 69 FVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRAL 117
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 40/105 (38%)
Query: 429 DPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSH 488
D E+ +K AF FD+D +G I+ LR ++T++G++ TDE
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE-------------------- 40
Query: 489 LSDKHHIRLEWMIIVLIMIEVDEMYREAPIK-NGMFDYIEFTRIL 532
EVDEM REA + +G +Y EF +++
Sbjct: 41 -------------------EVDEMIREADVDGDGQINYEEFVKVM 66
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ KEAF + D++++GFI +L ++ +LG+ TD+ ++ M+ EA G IN+ F+
Sbjct: 4 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 63
Query: 419 TL 420
+
Sbjct: 64 KV 65
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYL----EGMMGEAPGPINFTM 416
+I+ +EAF D+++DG+I+ DL + + ++G PT+ L + + G ++F
Sbjct: 23 EIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDD 82
Query: 417 FLTLFGDRLQGTDPEDV----IKNAFGCFDEDNSGIINEERLRELLTSM 461
F+ L G +L + + +++AF FD + G I+ LRE + +
Sbjct: 83 FVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKL 131
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 64/121 (52%), Gaps = 10/121 (8%)
Query: 359 QAQIQNFKEAFNM-IDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPIN 413
+ Q FK AF++ + DG I ++L ++ LG+NPT + L+ M+ E G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 414 FTMFLTLF----GDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDED 469
F FL + D +G E+ + + F FD++ G I+ + L+ +L + G+ T++D
Sbjct: 74 FDEFLVMMVRSMKDDSKGK-SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDD 132
Query: 470 V 470
+
Sbjct: 133 I 133
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 369 FNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMM 405
F M D+N DG+ID ++L ML + G+ T+D +E +M
Sbjct: 101 FRMFDKNADGYIDLDELKIMLQATGETITEDDIEELM 137
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 428 TDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
TD E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 3 TDSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEV 45
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ +EAF + D++ +G+I DL ++ +LG+ TD+ ++ M+ EA G +N+ F+
Sbjct: 7 EEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFV 66
Query: 419 TLF 421
+
Sbjct: 67 QMM 69
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYL----EGMMGEAPGPINFTM 416
+I+ +EAF D+++DG+I+ DL + + ++G PT+ L + + G ++F
Sbjct: 9 EIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDD 68
Query: 417 FLTLFGDRLQGTDPEDV----IKNAFGCFDEDNSGIINEERLRELLTSM 461
F+ L G +L + + +++AF FD + G I+ LRE + +
Sbjct: 69 FVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKL 117
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMG----EAPGPINF 414
Q Q+ F+ +FN D+ + G +D ED L S+G N + +M G + F
Sbjct: 721 QEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTF 780
Query: 415 TMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLREL 457
F+ TD D + +F D + I +E REL
Sbjct: 781 QAFIDFMSRETADTDTADQVMASFKILAGDKNYITVDELRREL 823
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 64/121 (52%), Gaps = 10/121 (8%)
Query: 359 QAQIQNFKEAFNM-IDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPIN 413
+ Q FK AF++ + DG I ++L ++ LG+NPT + L+ M+ E G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 414 FTMFLTL----FGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDED 469
F FL + D +G E+ + + F +D++ G I+ + L+ +L + G+ T++D
Sbjct: 74 FDEFLVMMVRSMKDDSKGK-SEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDD 132
Query: 470 V 470
+
Sbjct: 133 I 133
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ + F M D+N DG+ID ++L ML + G+ T+D +E +M + G I++ FL
Sbjct: 95 EELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 421 FGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
F ++ TD E+ I+ AF D+D +G I+ LR ++T++G++ TDE+V
Sbjct: 18 FQSLMKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEV 67
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M D + +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G
Sbjct: 22 MKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 81
Query: 412 INFTMFLTLF 421
+N+ F+ +
Sbjct: 82 VNYEEFVQMM 91
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTM 416
QI FKEAF + D++ +G I +L ++ SLG +P++ + +M E I F+
Sbjct: 8 QIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSE 67
Query: 417 FLTLFGDRLQ 426
FL L +L+
Sbjct: 68 FLALMSRQLK 77
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTD---EDVMNE---KLNHCLELVDLLS 486
K AF FD+DN+G I+ L ++ S+G ++ D+MNE NH +E + L+
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 29/42 (69%)
Query: 429 DPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
D E+ +K AF FD+D +G I+ LR ++ ++G++ TDE+V
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEV 42
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ KEAF + D++++G+I +L ++ +LG+ TD+ +E M+ EA G +N+ F+
Sbjct: 4 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 63
Query: 419 TLF 421
+
Sbjct: 64 KMM 66
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 40/109 (36%)
Query: 425 LQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDL 484
++ D E+ + AF FD D +G+I+ LR ++T++G++ TD+
Sbjct: 1 MKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDD---------------- 44
Query: 485 LSSHLSDKHHIRLEWMIIVLIMIEVDEMYREAPI-KNGMFDYIEFTRIL 532
EVDEM REA I +G +Y EF R++
Sbjct: 45 -----------------------EVDEMIREADIDGDGHINYEEFVRMM 70
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGP 411
M +Q + EAF + D++ +G I +L ++ +LG+ TDD ++ M+ EA G
Sbjct: 1 MKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGH 60
Query: 412 INFTMFLTLF 421
IN+ F+ +
Sbjct: 61 INYEEFVRMM 70
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
E+ I+ AF FD+D +G I+ LR ++T++G++ TDE+V
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 40
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ +EAF + D++ +G+I +L ++ +LG+ TD+ ++ M+ EA G +N+ F+
Sbjct: 2 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 61
Query: 419 TLF 421
+
Sbjct: 62 QMM 64
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 355 AMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APG 410
A + I FK AF+M D + G I ++L ++ LG+NPT + L+ ++ E G
Sbjct: 1 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 60
Query: 411 PINFTMFLTL 420
I+F FL +
Sbjct: 61 TIDFEEFLVM 70
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Query: 359 QAQIQNFKEAFNM-IDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPIN 413
+ Q FK AF++ + DG I ++L ++ LG+NPT + L+ M+ E G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 414 FTMFLTL----FGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDED 469
F FL + D +G E+ + + F D++ G I+ + L+ +L + G+ T++D
Sbjct: 74 FDEFLVMMVRSMKDDSKGK-SEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDD 132
Query: 470 V 470
+
Sbjct: 133 I 133
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 369 FNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
F M D+N DG+ID ++L ML + G+ T+D +E +M + G I++ FL
Sbjct: 101 FRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 355 AMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APG 410
A + I FK AF+M D + G I ++L ++ LG+NPT + L+ ++ E G
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71
Query: 411 PINFTMFLTL 420
I+F FL +
Sbjct: 72 TIDFEEFLVM 81
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTD----DYLEGMMGEAPGPINFTM 416
+I KE FN ID ++ G I E+L L +G N + D + + G I++
Sbjct: 25 EIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYKE 84
Query: 417 FL--TLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMG 462
F+ TL L + ED + AF FD+D SG I + L++ G
Sbjct: 85 FIAATL---HLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG 129
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 38.5 bits (88), Expect = 0.010, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 355 AMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APG 410
A + I FK AF+M D + G I + L ++ LG+NPT + L+ ++ E G
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71
Query: 411 PINFTMFLTL 420
I+F FL +
Sbjct: 72 TIDFEEFLVM 81
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINF 414
+ Q Q +EAF++ D + G ID ++L + +LG P + ++ M+ E G I+F
Sbjct: 26 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDF 85
Query: 415 TMFLTLFGDRL 425
FLT+ ++
Sbjct: 86 EEFLTMMTAKM 96
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 38.1 bits (87), Expect = 0.011, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 355 AMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APG 410
A + I FK AF+M D + G I ++L ++ LG+NPT L+ ++ E G
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSG 71
Query: 411 PINFTMFLTL 420
I+F FL +
Sbjct: 72 TIDFEEFLVM 81
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 412 INFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
+NF FLT+ ++ D ++ I AF FD+D +G I+ + L+ + +G+ TDE++
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEEL 59
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMG----EAPGPINFTM 416
+++ +EAF + D++ +GFI K++L + SLG P + LE ++ + G ++F
Sbjct: 34 ELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEE 93
Query: 417 FLTLFG 422
F+TL G
Sbjct: 94 FVTLLG 99
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 17/130 (13%)
Query: 355 AMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTD-----DYLEGMMGEAP 409
A+ DQ+ + N F +D++R G I +L L++ P + + E
Sbjct: 2 ALPDQSFLWN---VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENK 58
Query: 410 GPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDE- 468
+NF+ F ++ TD + N F +D DNSG+I++ L++ L+ G R +D+
Sbjct: 59 AGVNFSEFTGVWK---YITDWQ----NVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQF 111
Query: 469 -DVMNEKLNH 477
D++ K +
Sbjct: 112 HDILIRKFDR 121
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 17/130 (13%)
Query: 355 AMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTD-----DYLEGMMGEAP 409
A+ DQ+ + N F +D++R G I +L L++ P + + E
Sbjct: 2 ALPDQSFLWN---VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENK 58
Query: 410 GPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDE- 468
+NF+ F ++ TD + N F +D DNSG+I++ L++ L+ G R +D+
Sbjct: 59 AGVNFSEFTGVWK---YITDWQ----NVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQF 111
Query: 469 -DVMNEKLNH 477
D++ K +
Sbjct: 112 HDILIRKFDR 121
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 56/108 (51%), Gaps = 13/108 (12%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPT--------DDYLEGMMGEAP- 409
Q + + + F ID+N DG +D+++L D + L + ++ ++G A
Sbjct: 342 QEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADF 401
Query: 410 ---GPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERL 454
G I+++ F+T+ DR + +D +++AF FD+D +G I+ + L
Sbjct: 402 DRNGYIDYSEFVTVAMDR-KSLLSKDKLESAFQKFDQDGNGKISVDEL 448
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 14/117 (11%)
Query: 368 AFNMIDQNRDGFIDKEDLHDMLASLGKNPTD-----DYLEGMMGEAPGPINFTMFLTLFG 422
F +D++R G I +L L++ P + + E +NF+ F ++
Sbjct: 30 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 89
Query: 423 DRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDE--DVMNEKLNH 477
TD + N F +D DNSG+I++ L++ L+ G R +D+ D++ K +
Sbjct: 90 ---YITDWQ----NVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDR 139
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 14/117 (11%)
Query: 368 AFNMIDQNRDGFIDKEDLHDMLASLGKNPTD-----DYLEGMMGEAPGPINFTMFLTLFG 422
F +D++R G I +L L++ P + + E +NF+ F ++
Sbjct: 31 VFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 90
Query: 423 DRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDE--DVMNEKLNH 477
TD + N F +D DNSG+I++ L++ L+ G R +D+ D++ K +
Sbjct: 91 ---YITDWQ----NVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDR 140
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMG----EAPGPINFTM 416
Q Q +EAF++ D + G ID ++L + +LG P + ++ M+ E G +NF
Sbjct: 29 QKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGD 88
Query: 417 FLTLFGDRL 425
FLT+ ++
Sbjct: 89 FLTVMTQKM 97
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 14/117 (11%)
Query: 368 AFNMIDQNRDGFIDKEDLHDMLASLGKNPTD-----DYLEGMMGEAPGPINFTMFLTLFG 422
F +D++R G I +L L++ P + + E +NF+ F ++
Sbjct: 9 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 68
Query: 423 DRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDE--DVMNEKLNH 477
TD + N F +D DNSG+I++ L++ L+ G R +D+ D++ K +
Sbjct: 69 ---YITDWQ----NVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDR 118
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 14/117 (11%)
Query: 368 AFNMIDQNRDGFIDKEDLHDMLASLGKNPTD-----DYLEGMMGEAPGPINFTMFLTLFG 422
F +D++R G I +L L++ P + + E +NF+ F ++
Sbjct: 8 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 67
Query: 423 DRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDE--DVMNEKLNH 477
TD + N F +D DNSG+I++ L++ L+ G R +D+ D++ K +
Sbjct: 68 ---YITDWQ----NVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDR 117
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 16/119 (13%)
Query: 369 FNMIDQNRDGFIDKED-------LHDMLASLG--KN---PTDDYLEGMMGEAPGPINFTM 416
F +D+N DG +DK++ L + LG KN D+ L+ + + G I ++
Sbjct: 361 FKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSE 420
Query: 417 FLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLREL--LTSMGDRFTDEDVMNE 473
F+++ D+ Q E+ ++ AF FD D SG I +E L L LTS+ ++ T DV+ E
Sbjct: 421 FISVCMDK-QILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSISEK-TWNDVLGE 477
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 362 IQNFKEAFNMIDQNRDGFIDKEDLHDMLASLG-KNPT--DDYLEGMMGEAPGPINFTMFL 418
++ K F ++D++ G+I KE L L G K P D L+ + + G I++T F+
Sbjct: 51 VEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDLLLDQIDSDGSGKIDYTEFI 110
Query: 419 TLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELL 458
DR Q + + +I AF FD DN G I L +L
Sbjct: 111 AAALDRKQLS--KKLIYCAFRVFDVDNDGEITTAELAHIL 148
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 369 FNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
F M D+N DG+ID E+L ML + G+ T+D +E +M + G I++ FL
Sbjct: 11 FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 64
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ + F M D+N DG+ID E+L ML + G+ T+D +E +M + G I++ FL
Sbjct: 15 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 74
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 369 FNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
F M D+N DG+ID E+L ML + G+ T+D +E +M + G I++ FL
Sbjct: 16 FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 69
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 369 FNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
F M D+N DG+ID E+L ML + G+ T+D +E +M + G I++ FL
Sbjct: 13 FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 66
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 402 EGMMGEAP-GPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTS 460
+G + + P G + F+ ++ PED + F FD+DN+G I+ E +L++
Sbjct: 32 KGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLST 91
Query: 461 MGDRFTDEDVMNEKLNHCLELVDL 484
T + EKL+ EL DL
Sbjct: 92 -----TSRGTLEEKLSWAFELYDL 110
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINF 414
+ +I KE F MID + G I ++L D L +G + ++ +M A G I++
Sbjct: 6 EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDY 65
Query: 415 TMFL--TLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMG 462
F+ T+ ++L+ E+ + +AF FD+D SG I + +++ G
Sbjct: 66 GEFIAATVHLNKLE---REENLVSAFSYFDKDGSGYITLDEIQQACKDFG 112
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTMFL 418
+ KEAF ++D+ + G I + L +L SLG T+D +E M+ E G +++ F
Sbjct: 7 RELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFK 66
Query: 419 TLF 421
L
Sbjct: 67 CLM 69
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 434 IKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMN 472
+K AF D++ G+I + LR +L S+GD T++++ N
Sbjct: 9 LKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIEN 47
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 56/108 (51%), Gaps = 13/108 (12%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPT--------DDYLEGMMGEAP- 409
Q + + + F ID+N DG +D+++L D + L + ++ ++G A
Sbjct: 59 QEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADF 118
Query: 410 ---GPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERL 454
G I+++ F+T+ DR + +D +++AF FD+D +G I+ + L
Sbjct: 119 DRNGYIDYSEFVTVAMDR-KSLLSKDKLESAFQKFDQDGNGKISVDEL 165
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 359 QAQIQNFKEAFNMIDQN-RDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPIN 413
+ Q FK AF++ Q+ DG I ++L ++ LG+NPT + L+ M+ E G ++
Sbjct: 14 EEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 414 FTMFLTLF 421
F FL +
Sbjct: 74 FDEFLVMM 81
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 368 AFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFLTL 420
F + D+N DGFID E+L ++L + G++ ++ +E +M ++ G I+F FL +
Sbjct: 15 CFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKM 71
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDL----HDMLASLG----------KNPTDDYLEGMMG 406
+ + E F +D N DG +D+++L H+ + G + +D ++ +M
Sbjct: 329 ETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMP 388
Query: 407 ----EAPGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMG 462
+ G I ++ F+ DR E ++ AF FD+D SG I+ + L +L +
Sbjct: 389 LLDMDGSGSIEYSEFIASAIDRTILLSRER-MERAFKMFDKDGSGKISTKELFKLFSQ-- 445
Query: 463 DRFTDEDVMNEKLNHCLELVD 483
D + E+L +E VD
Sbjct: 446 ---ADSSIQMEELESIIEQVD 463
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 361 QIQNFKEAFNMIDQN-RDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFT 415
Q FK AF++ Q+ DG I ++L ++ LG+NPT + L+ M+ E G ++F
Sbjct: 16 QKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Query: 416 MFLTLF 421
FL +
Sbjct: 76 EFLVMM 81
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 359 QAQIQNFKEAFNMIDQN-RDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPIN 413
+ Q FK AF++ Q DG I ++L ++ LG+NPT + L+ M+ E G ++
Sbjct: 14 EEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 414 FTMFLTLF 421
F FL +
Sbjct: 74 FDEFLVMM 81
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINFTMFL 418
+ + F M D+N DG+ID ++L ML + G+ T+D +E +M + G I++ FL
Sbjct: 6 EELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 65
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYL----EGMMGEAPGPINFTM 416
+I+ +EAF D+++DG+I+ DL + + ++G PT+ L + + G ++F
Sbjct: 8 EIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDD 67
Query: 417 FLTLFGDRL 425
F+ L G +L
Sbjct: 68 FVELMGPKL 76
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 390 ASLGKNPTDD--YLEGMMGEAPGPINFTMFLTLFGDRLQ--------------GTDPEDV 433
+S GK D+ Y +G AP I+ L+GD L + E++
Sbjct: 27 SSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDNLTYEQYLEYLSICVHDKDNVEEL 86
Query: 434 IKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMN 472
IK F FD + +G + + +++ +LT+ GD TD++ ++
Sbjct: 87 IK-MFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAID 124
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPT----DDYLEGMMGEAPGPINF 414
+A+ ++F +AF + D+ G + DL ML LG+ T D+ L+G+ ++ G I++
Sbjct: 1 KAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDY 60
Query: 415 TMFL 418
F+
Sbjct: 61 KKFI 64
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 430 PEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
ED +K AF FD++++G ++ LR +LT +G++ TD +V
Sbjct: 4 TEDFVK-AFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEV 43
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPT 397
Q +KEAF + D++ D + E+L ++ +LG NPT
Sbjct: 14 QEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPT 48
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 23/140 (16%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDK---------------EDLHDMLASLGKNPTDDYLEG 403
Q + + F+ D+N DG +D+ +D + AS ++ D L+
Sbjct: 331 QDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDA 390
Query: 404 MMGEAPGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGD 463
+ + G I ++ F+T+ DR E ++ AF FD DNSG I+ T +
Sbjct: 391 VDFDKNGYIEYSEFVTVAXDRKTLLSRER-LERAFRXFDSDNSGKISS-------TELAT 442
Query: 464 RFTDEDVMNEKLNHCLELVD 483
F DV +E L VD
Sbjct: 443 IFGVSDVDSETWKSVLSEVD 462
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 23/140 (16%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDL--------------HDML-ASLGKNPTDDYLEG 403
Q + + F+ +D+N DG +D+ +L ML AS ++ D L+
Sbjct: 331 QDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDA 390
Query: 404 MMGEAPGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGD 463
+ + G I ++ F+T+ DR E ++ AF FD DNSG I+ T +
Sbjct: 391 VDFDKNGYIEYSEFVTVAMDRKTLLSRER-LERAFRMFDSDNSGKISS-------TELAT 442
Query: 464 RFTDEDVMNEKLNHCLELVD 483
F DV +E L VD
Sbjct: 443 IFGVSDVDSETWKSVLSEVD 462
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 23/140 (16%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDL--------------HDML-ASLGKNPTDDYLEG 403
Q + + F+ +D+N DG +D+ +L ML AS ++ D L+
Sbjct: 354 QDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDA 413
Query: 404 MMGEAPGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGD 463
+ + G I ++ F+T+ DR E ++ AF FD DNSG I+ L +
Sbjct: 414 VDFDKNGYIEYSEFVTVAMDRKTLLSRER-LERAFRMFDSDNSGKISSTELATI------ 466
Query: 464 RFTDEDVMNEKLNHCLELVD 483
F DV +E L VD
Sbjct: 467 -FGVSDVDSETWKSVLSEVD 485
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Query: 362 IQNFKEAFNMIDQNRDGFIDKEDLHDML--ASLGKNPT-DDYLEGMMGEAPGPINFTMFL 418
+Q K AF +D+ G I K L L + L P D L+ + + G I++T FL
Sbjct: 54 VQKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPNFDLLLDQIDSDGSGNIDYTEFL 113
Query: 419 TLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDR--FTDEDV 470
DR Q + + +I AF FD DN G I L +L + R T+ DV
Sbjct: 114 AAAIDRRQLS--KKLIYCAFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDV 165
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 23/140 (16%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDL--------------HDML-ASLGKNPTDDYLEG 403
Q + + F+ +D+N DG +D+ +L ML AS ++ D L+
Sbjct: 355 QDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDA 414
Query: 404 MMGEAPGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGD 463
+ + G I ++ F+T+ DR E ++ AF FD DNSG I+ L +
Sbjct: 415 VDFDKNGYIEYSEFVTVAMDRKTLLSRER-LERAFRMFDSDNSGKISSTELATI------ 467
Query: 464 RFTDEDVMNEKLNHCLELVD 483
F DV +E L VD
Sbjct: 468 -FGVSDVDSETWKSVLSEVD 486
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 359 QAQIQNFKEAFNM-IDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPIN 413
+ Q FK AF++ + DG I ++L ++ LG+NPT + L+ M+ E G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 414 FTMFLTLF 421
F FL +
Sbjct: 74 FDEFLVMM 81
>pdb|1J7Q|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
pdb|1J7R|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
Length = 86
Score = 32.7 bits (73), Expect = 0.56, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 369 FNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGP 411
F++ D+N + D DML LG+ T E +M EA GP
Sbjct: 20 FDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGP 62
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 32.3 bits (72), Expect = 0.61, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 407 EAPGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELL 458
+A N+ F + G L P D IK FG D+D SG I EE L+ L
Sbjct: 19 QAADSFNYKSFFSTVG--LSSKTP-DQIKKVFGILDQDKSGFIEEEELQLFL 67
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 32.3 bits (72), Expect = 0.62, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 407 EAPGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELL 458
+A N+ F + G L P D IK FG D+D SG I EE L+ L
Sbjct: 20 QAADSFNYKSFFSTVG--LSSKTP-DQIKKVFGILDQDKSGFIEEEELQLFL 68
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 32.3 bits (72), Expect = 0.64, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA----PGPINF 414
+A +++ + AF DQ+ DG I ++L +A LG+ + L+ M+ EA G +N+
Sbjct: 2 RAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNY 61
Query: 415 TMF 417
F
Sbjct: 62 EEF 64
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 359 QAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLG---KNPTDDYLEGMM---GEAPGPI 412
+ Q Q KEAF++ D N+ G ID +L + +LG K P + LE M E G I
Sbjct: 3 EEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKP--EILELMNEYDREGNGYI 60
Query: 413 NFTMFLTLFGDRLQGTD 429
F FL + ++++ D
Sbjct: 61 GFDDFLDIMTEKIKNRD 77
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 359 QAQIQNFKEAFNM-IDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPIN 413
+ Q FK AF++ + DG I ++L ++ LG+NPT + L+ M+ E G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 414 FTMFLTLF 421
F FL +
Sbjct: 74 FDEFLVMM 81
>pdb|2HPG|A Chain A, The Crystal Structure Of A Thermophilic Trap Periplasmic
Binding Protein
pdb|2HPG|B Chain B, The Crystal Structure Of A Thermophilic Trap Periplasmic
Binding Protein
pdb|2HPG|C Chain C, The Crystal Structure Of A Thermophilic Trap Periplasmic
Binding Protein
pdb|2HPG|D Chain D, The Crystal Structure Of A Thermophilic Trap Periplasmic
Binding Protein
Length = 327
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 134 SKYTISNAMALSVKLGIWEAALDKYVDSIEYITEVNGENSIQVIAKYQVGKEPRFIYFFQ 193
+KYT+ L+ +A L K+ ++E T NG+ I+V Q+G E I +
Sbjct: 7 AKYTLRFGHVLAPGEPYHQAFL-KWAKAVEEKT--NGDVRIEVFPSSQLGVEEDIIEQIR 63
Query: 194 EGSLVAWN---------VSDLEIENLLEFLKQFEIKPYEKAVVLNEKELMNYTYSPNIRE 244
G+ V WN V D+ + NL F+ K E+A+ + L SP ++
Sbjct: 64 XGAPVGWNTDSARLGXYVKDIGVXNLAYFIDFXGAKTPEEAIEV----LKKIKQSPTXQK 119
Query: 245 VLQKTGQLFALR 256
L++ Q F ++
Sbjct: 120 WLKELEQRFGIK 131
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 16/117 (13%)
Query: 368 AFNMIDQNRDGFIDKEDLHDMLASLGKNPTD-----DYLEGMMGEAPGPINFTMFLTLFG 422
F +D++R G I +L L++ P + + E +NF+ F ++
Sbjct: 9 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 68
Query: 423 DRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDE--DVMNEKLNH 477
TD + N F +D DNSG+I++ L++ L+ G R +D+ D++ K +
Sbjct: 69 ---YITDWQ----NVFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHDILIRKFDR 116
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 359 QAQIQNFKEAFNM-IDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPIN 413
+ Q FK AF++ + DG I ++L ++ LG+NPT + L+ M+ E G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 414 FTMFLTLF 421
F FL +
Sbjct: 74 FDEFLVMM 81
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 19/134 (14%)
Query: 357 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDY-LEGMMGEAPGPINFT 415
F QA + F +D+N+ G++ + DL + +L NP D +E + ++F
Sbjct: 23 FSQASLLRLHHRFRALDRNKKGYLSRMDLQ-QIGALAVNPLGDRIIESFFPDGSQRVDFP 81
Query: 416 MFLTLFG-------DRLQGTDPE---------DVIKNAFGCFDEDNSGIINEERLRELLT 459
F+ + + + DP+ + + AF +D D G I+ + ++L
Sbjct: 82 GFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLR 141
Query: 460 SM-GDRFTDEDVMN 472
M G + T+E + N
Sbjct: 142 LMVGVQVTEEQLEN 155
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 359 QAQIQNFKEAFNM-IDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPIN 413
+ Q FK AF++ + DG I ++L ++ LG+NPT + L+ M+ E G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 414 FTMFLTLF 421
F FL +
Sbjct: 74 FDEFLVMM 81
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 21/83 (25%)
Query: 368 AFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGPINFTMFLTLFGDRLQG 427
AFN+ D N+DG+I KE++ D++ + + MMG+ P+ L+
Sbjct: 143 AFNLYDINKDGYITKEEMLDIMKA---------IYDMMGKCTYPV------------LKE 181
Query: 428 TDPEDVIKNAFGCFDEDNSGIIN 450
P ++ F D++ G++
Sbjct: 182 DAPRQHVETFFQKMDKNKDGVVT 204
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 359 QAQIQNFKEAFNM-IDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPIN 413
+ Q FK AF++ + DG I ++L ++ LG+NPT + L+ M+ E G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 414 FTMFLTLF 421
F +L +
Sbjct: 74 FDEWLVMM 81
>pdb|2AUC|A Chain A, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|B Chain B, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|C Chain C, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
Length = 126
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 16/86 (18%)
Query: 405 MGEAPGPINFTMFLTLFGDRL--------------QGTDPEDVIKNAFGCFDEDNSGIIN 450
+G AP + L+GD L + E++IK F FD ++SG +
Sbjct: 25 LGLAPSSTDEKKIRDLYGDSLTYEQYLEYLTXCVHDRDNXEELIK-XFSHFDNNSSGFLT 83
Query: 451 EERLRELLTSMGDRFTDEDVMNEKLN 476
+ + + +LT+ GD T+++ N+ LN
Sbjct: 84 KNQXKNILTTWGDALTEQEA-NDALN 108
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 359 QAQIQNFKEAFNM-IDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPIN 413
+ Q FK AF++ + DG I ++L ++ LG+NPT + L+ M+ E G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 414 FTMFLTLFG 422
F +L +
Sbjct: 74 FDEWLVMMA 82
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 429 DPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
D + I AF FD+DNSG I + LR + +G+ T+E++
Sbjct: 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEEL 47
Score = 28.9 bits (63), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 368 AFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEA 408
AF + D + G I +DL + LG+N T++ L+ M+ EA
Sbjct: 14 AFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEA 54
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 27/110 (24%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGPINFTMFLTLFG 422
+ K AFN+ D N+DG+I KE++ ++ S + MMG PI
Sbjct: 9 EKLKWAFNLYDINKDGYITKEEMLAIMKS---------IYDMMGRHTYPI---------- 49
Query: 423 DRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMN 472
L+ P + ++ F D + G++ E E DE++M+
Sbjct: 50 --LREDAPAEHVERFFEKMDRNQDGVVTIEEFLEACQK------DENIMS 91
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 30.8 bits (68), Expect = 2.1, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 24/35 (68%)
Query: 364 NFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTD 398
+ K+ F+++D+++DGFID+++L +L + D
Sbjct: 42 DVKKVFHILDKDKDGFIDEDELGSILKGFSSDARD 76
>pdb|3B3D|A Chain A, B.Subtilis Ytbe
pdb|3B3D|B Chain B, B.Subtilis Ytbe
pdb|3B3D|C Chain C, B.Subtilis Ytbe
Length = 314
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 61 FFQEGSLVAWNVSDLEIENLLEFLKQFEIKPYEKAV----VLNEKELMNYTYSPNIKV 114
++EG + A VS+ +I +L + + EIKP V L +KEL+ Y + I++
Sbjct: 167 LYKEGRIKAIGVSNFQIHHLEDLMTAAEIKPMINQVEFHPRLTQKELIRYCQNQGIQM 224
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 191 FFQEGSLVAWNVSDLEIENLLEFLKQFEIKPYEKAV----VLNEKELMNYTYSPNIR 243
++EG + A VS+ +I +L + + EIKP V L +KEL+ Y + I+
Sbjct: 167 LYKEGRIKAIGVSNFQIHHLEDLMTAAEIKPMINQVEFHPRLTQKELIRYCQNQGIQ 223
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 30.4 bits (67), Expect = 2.7, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
+ F FD D SG ++ + L++ LT+MG R + V
Sbjct: 75 RQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTV 110
>pdb|2XR6|A Chain A, Crystal Structure Of The Complex Of The Carbohydrate
Recognition Domain Of Human Dc-Sign With Pseudo
Trimannoside Mimic
Length = 170
Score = 30.4 bits (67), Expect = 2.9, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 263 SDLLDTPDFYWERDDLENLYLQTCNYFSISRRTK---MISRIYICRRVTTSASRDEQ 316
S LL + YW R + N+ + C FS + +++ +IC++ S+SRDE+
Sbjct: 99 SPLLPSFKQYWNRGEPNNVGEEDCAEFSGNGWNDDKCNLAKFWICKKSAASSSRDEE 155
>pdb|2B6B|D Chain D, Cryo Em Structure Of Dengue Complexed With Crd Of Dc-Sign
Length = 175
Score = 30.4 bits (67), Expect = 2.9, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 263 SDLLDTPDFYWERDDLENLYLQTCNYFSISRRTK---MISRIYICRRVTTSASRDEQ 316
S LL + YW R + N+ + C FS + +++ +IC++ S SRDE+
Sbjct: 104 SPLLPSFKQYWNRGEPNNVGEEDCAEFSGNGWNDDKCNLAKFWICKKSAASCSRDEE 160
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTMFL 418
Q +EAF + D+ +G+I + + ++LA L + + + L+ M+ E G ++F F+
Sbjct: 3 QELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 62
Query: 419 TLF 421
+
Sbjct: 63 GVM 65
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
+ F FD D SG ++ + L++ LT+MG R + + V
Sbjct: 106 RQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAV 141
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 380 IDKEDLHDMLAS--LGKNPTDDYLEGMMGEAP-GPINFTMFLTLFGDRLQGTDPEDVIKN 436
+ ++ L D++ S K + +G + P G +N + F ++ DP +
Sbjct: 8 LSQDQLQDLVRSTRFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEY 67
Query: 437 AFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHL 489
F FD D +G I+ +E + ++ T +N+KL +L DL ++ L
Sbjct: 68 VFNVFDADKNGYID---FKEFICALS--VTSRGELNDKLIWAFQLYDLDNNGL 115
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLG--KNPTDDYLEGMMGEAPGPINFTMFL 418
I+ E F +D N +G + +++ +LAS+G K + L+ + G I +T F+
Sbjct: 37 HIKYINELFYKLDTNHNGSLSHREIYTVLASVGIKKWDINRILQALDINDRGNITYTEFM 96
Query: 419 TLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELL 458
G +K AF D+D G I++ + L+
Sbjct: 97 A--GCYRWKNIESTFLKAAFNKIDKDEDGYISKSDIVSLV 134
>pdb|1K9I|A Chain A, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|B Chain B, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|C Chain C, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|D Chain D, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|E Chain E, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|F Chain F, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|G Chain G, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|H Chain H, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|I Chain I, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|J Chain J, Complex Of Dc-Sign And Glcnac2man3
Length = 156
Score = 30.0 bits (66), Expect = 3.8, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 263 SDLLDTPDFYWERDDLENLYLQTCNYFSISRRTK---MISRIYICRRVTTSASRDEQ 316
S LL + YW R + N+ + C FS + +++ +IC++ S SRDE+
Sbjct: 85 SPLLPSFKQYWNRGEPNNVGEEDCAEFSGNGWNDDKCNLAKFWICKKSAASCSRDEE 141
>pdb|2XR5|A Chain A, Crystal Structure Of The Complex Of The Carbohydrate
Recognition Domain Of Human Dc-Sign With Pseudo
Dimannoside Mimic
Length = 166
Score = 29.6 bits (65), Expect = 4.0, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 263 SDLLDTPDFYWERDDLENLYLQTCNYFSISRRTK---MISRIYICRRVTTSASRDEQ 316
S LL + YW R + N+ + C FS + +++ +IC++ S SRDE+
Sbjct: 95 SPLLPSFKQYWNRGEPNNVGEEDCAEFSGNGWNDDKCNLAKFWICKKSAASCSRDEE 151
>pdb|1SL4|A Chain A, Crystal Structure Of Dc-Sign Carbohydrate Recognition
Domain Complexed With Man4
pdb|2IT6|A Chain A, Crystal Structure Of Dcsign-Crd With Man2
Length = 155
Score = 29.6 bits (65), Expect = 4.0, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 263 SDLLDTPDFYWERDDLENLYLQTCNYFSISRRTK---MISRIYICRRVTTSASRDEQ 316
S LL + YW R + N+ + C FS + +++ +IC++ S SRDE+
Sbjct: 84 SPLLPSFKQYWNRGEPNNVGEEDCAEFSGNGWNDDKCNLAKFWICKKSAASCSRDEE 140
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTMFL 418
Q +EAF + D+ +G+I + + ++LA L + + + L+ M+ E G ++F F+
Sbjct: 91 QELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 150
Query: 419 TL 420
+
Sbjct: 151 GV 152
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 410 GPINFTMFLTLFGDRLQG--TDPEDV---IKNAFGCFDEDNSGIINEERLRELLTSMGDR 464
G I+F F + G R G +PE + ++ AF +D++ +G I+ + +RE+L +
Sbjct: 65 GDIDFDSF-KIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAEL--- 120
Query: 465 FTDEDVMNEKLNHCLELVDLLSSHLSD 491
DE + +E L+ ++ +D S D
Sbjct: 121 --DETLSSEDLDAMIDEIDADGSGTVD 145
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 24/93 (25%)
Query: 368 AFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGPINFTMFLTLFGDRLQG 427
FN+ D N+DG+I+KE++ D++ + + MMG+ P+ L+
Sbjct: 97 TFNLYDINKDGYINKEEMMDIVKA---------IYDMMGKYTYPV------------LKE 135
Query: 428 TDPEDVIKNAFGCFDEDNSGIINEERLRELLTS 460
P + F D++ GI+ L E L S
Sbjct: 136 DTPRQHVDVFFQKMDKNKDGIVT---LDEFLES 165
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 368 AFNMIDQNRDGFIDKEDLHDMLASLG 393
AF + D+N DG+ID E+L ++L + G
Sbjct: 10 AFRIFDKNADGYIDIEELGEILRATG 35
>pdb|3NQI|A Chain A, Crystal Structure Of A Putative Lipoprotein (Bf3042) From
Bacteroides Fragilis Nctc 9343 At 1.87 A Resolution
pdb|3NQI|B Chain B, Crystal Structure Of A Putative Lipoprotein (Bf3042) From
Bacteroides Fragilis Nctc 9343 At 1.87 A Resolution
pdb|3NQI|C Chain C, Crystal Structure Of A Putative Lipoprotein (Bf3042) From
Bacteroides Fragilis Nctc 9343 At 1.87 A Resolution
pdb|3NQI|D Chain D, Crystal Structure Of A Putative Lipoprotein (Bf3042) From
Bacteroides Fragilis Nctc 9343 At 1.87 A Resolution
Length = 246
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 23 VGKDLYELIEFDDNMQNGENSIQVIAKYQVGKEPRFIY--FFQEGSLVAWNVSDLEIENL 80
+ K + L+ + D++++G+ +++ +Y+V EP I + S A+ +S + L
Sbjct: 145 LAKHTFTLVCYTDDIKSGDTILKLYLRYKVEDEPAAIAERATRTSSFKAYEISQI----L 200
Query: 81 LEF-LKQFEIKPYEKAVVLNEKELMN 105
E+ LK + KP + +V + E N
Sbjct: 201 REYTLKSGQTKPAKITIVAQQNEYNN 226
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 9/45 (20%)
Query: 368 AFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGPI 412
FN+ D N+DG+I+KE++ D++ + + MMG+ P+
Sbjct: 94 TFNLYDINKDGYINKEEMMDIVKA---------IYDMMGKYTYPV 129
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 28/47 (59%)
Query: 424 RLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDV 470
++ D ++ I AF FD+D +G I+ + L+ + +G+ TDE++
Sbjct: 3 KMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEEL 49
>pdb|1SL5|A Chain A, Crystal Structure Of Dc-Sign Carbohydrate Recognition
Domain Complexed With Lnfp Iii (Dextra L504).
pdb|2IT5|A Chain A, Crystal Structure Of Dcsign-crd With Man6
Length = 139
Score = 29.3 bits (64), Expect = 6.3, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 263 SDLLDTPDFYWERDDLENLYLQTCNYFSISRRTK---MISRIYICRRVTTSASRDE 315
S LL + YW R + N+ + C FS + +++ +IC++ S SRDE
Sbjct: 84 SPLLPSFKQYWNRGEPNNVGEEDCAEFSGNGWNDDKCNLAKFWICKKSAASCSRDE 139
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 20/25 (80%)
Query: 368 AFNMIDQNRDGFIDKEDLHDMLASL 392
FN+ D N+DG+I+KE++ D++ ++
Sbjct: 130 TFNLYDINKDGYINKEEMMDIVKAI 154
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/136 (20%), Positives = 57/136 (41%), Gaps = 9/136 (6%)
Query: 375 NRDGFIDKEDLHDML--ASLGKNPTDDYLEGMMGEAP-GPINFTMFLTLFGDRLQGTDPE 431
++ G + KE L ++ + + + + E P G I F T++ DP+
Sbjct: 3 SKSGALSKEILEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPK 62
Query: 432 DVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSD 491
++ F FD ++ G ++ +E + ++ T N+KL L D+ +
Sbjct: 63 AYAQHVFRSFDANSDGTLD---FKEYVIAL--HMTSAGKTNQKLEWAFSLYDVDGNGTIS 117
Query: 492 KHHIRLEWMIIVLIMI 507
K+ + LE + + MI
Sbjct: 118 KNEV-LEIVTAIFKMI 132
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 20/25 (80%)
Query: 368 AFNMIDQNRDGFIDKEDLHDMLASL 392
FN+ D N+DG+I+KE++ D++ ++
Sbjct: 94 TFNLYDINKDGYINKEEMMDIVKAI 118
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 28/136 (20%), Positives = 57/136 (41%), Gaps = 9/136 (6%)
Query: 375 NRDGFIDKEDLHDML--ASLGKNPTDDYLEGMMGEAP-GPINFTMFLTLFGDRLQGTDPE 431
++ G + KE L ++ + + + + E P G I F T++ DP+
Sbjct: 3 SKSGALSKEILEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPK 62
Query: 432 DVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSD 491
++ F FD ++ G ++ +E + ++ T N+KL L D+ +
Sbjct: 63 AYAQHVFRSFDANSDGTLD---FKEYVIAL--HMTSAGKTNQKLEWAFSLYDVDGNGTIS 117
Query: 492 KHHIRLEWMIIVLIMI 507
K+ + LE + + MI
Sbjct: 118 KNEV-LEIVTAIFKMI 132
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 368 AFNMIDQNRDGFIDKEDLHDMLASLGKNP-TDDYLEGMMGEAP----GPINFTMFLTL 420
AF + D N DG ID ++ ++ +G+ P TD +E M EA G I+ F+ L
Sbjct: 13 AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDL 70
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/136 (20%), Positives = 57/136 (41%), Gaps = 9/136 (6%)
Query: 375 NRDGFIDKEDLHDML--ASLGKNPTDDYLEGMMGEAP-GPINFTMFLTLFGDRLQGTDPE 431
++ G + KE L ++ + + + + E P G I F T++ DP+
Sbjct: 4 SKSGALSKEILEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPK 63
Query: 432 DVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSD 491
++ F FD ++ G ++ +E + ++ T N+KL L D+ +
Sbjct: 64 AYAQHVFRSFDANSDGTLD---FKEYVIAL--HMTSAGKTNQKLEWAFSLYDVDGNGTIS 118
Query: 492 KHHIRLEWMIIVLIMI 507
K+ + LE + + MI
Sbjct: 119 KNEV-LEIVTAIFKMI 133
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 28/136 (20%), Positives = 57/136 (41%), Gaps = 9/136 (6%)
Query: 375 NRDGFIDKEDLHDML--ASLGKNPTDDYLEGMMGEAP-GPINFTMFLTLFGDRLQGTDPE 431
++ G + KE L ++ + + + + E P G I F T++ DP+
Sbjct: 3 SKSGALSKEILEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPK 62
Query: 432 DVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSD 491
++ F FD ++ G ++ +E + ++ T N+KL L D+ +
Sbjct: 63 AYAQHVFRSFDANSDGTLD---FKEYVIAL--HMTSAGKTNQKLEWAFSLYDVDGNGTIS 117
Query: 492 KHHIRLEWMIIVLIMI 507
K+ + LE + + MI
Sbjct: 118 KNEV-LEIVTAIFKMI 132
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,848,213
Number of Sequences: 62578
Number of extensions: 674503
Number of successful extensions: 2661
Number of sequences better than 100.0: 251
Number of HSP's better than 100.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 1974
Number of HSP's gapped (non-prelim): 593
length of query: 542
length of database: 14,973,337
effective HSP length: 104
effective length of query: 438
effective length of database: 8,465,225
effective search space: 3707768550
effective search space used: 3707768550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)