Query psy15785
Match_columns 542
No_of_seqs 578 out of 2289
Neff 7.4
Searched_HMMs 46136
Date Fri Aug 16 21:16:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15785.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15785hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1723 Uncharacterized conser 100.0 7.8E-47 1.7E-51 370.6 14.5 228 2-305 58-286 (331)
2 PF02582 DUF155: Uncharacteris 100.0 3.3E-39 7.2E-44 305.0 14.9 175 58-300 1-175 (175)
3 KOG2861|consensus 100.0 3.8E-39 8.3E-44 330.7 14.4 237 3-305 94-353 (399)
4 KOG0031|consensus 99.9 4.5E-24 9.9E-29 189.3 15.3 159 343-540 12-171 (171)
5 COG5126 FRQ1 Ca2+-binding prot 99.9 4E-23 8.7E-28 189.0 16.5 148 351-537 8-159 (160)
6 KOG0027|consensus 99.9 6.1E-21 1.3E-25 176.2 15.6 140 357-535 2-150 (151)
7 KOG0028|consensus 99.8 1.8E-18 3.9E-23 155.0 14.3 141 356-535 26-171 (172)
8 KOG0037|consensus 99.8 1.6E-17 3.5E-22 156.6 15.5 154 361-533 55-219 (221)
9 PTZ00183 centrin; Provisional 99.7 3.6E-17 7.8E-22 150.9 16.1 142 356-536 10-156 (158)
10 PTZ00184 calmodulin; Provision 99.7 8.1E-17 1.8E-21 146.6 15.3 141 355-534 3-148 (149)
11 KOG0030|consensus 99.7 3.9E-17 8.4E-22 143.1 12.3 140 356-534 4-151 (152)
12 KOG0034|consensus 99.6 1.1E-14 2.4E-19 137.8 14.7 147 355-537 25-178 (187)
13 KOG0044|consensus 99.3 1.8E-11 4E-16 116.1 14.3 147 354-536 20-177 (193)
14 KOG0036|consensus 99.3 2.7E-11 5.9E-16 123.8 14.4 136 356-536 7-148 (463)
15 PLN02964 phosphatidylserine de 99.0 2.4E-09 5.1E-14 118.6 12.4 101 355-460 135-243 (644)
16 cd05022 S-100A13 S-100A13: S-1 99.0 1E-09 2.2E-14 91.9 6.6 65 431-534 7-75 (89)
17 KOG0038|consensus 99.0 6.4E-09 1.4E-13 92.2 11.3 146 356-537 21-180 (189)
18 PF13499 EF-hand_7: EF-hand do 98.9 2.9E-09 6.2E-14 83.8 6.7 65 433-532 1-66 (66)
19 KOG0027|consensus 98.8 2E-08 4.3E-13 92.7 10.0 94 431-536 7-115 (151)
20 COG5126 FRQ1 Ca2+-binding prot 98.8 2.8E-08 6.1E-13 91.5 10.0 95 431-536 19-122 (160)
21 cd05027 S-100B S-100B: S-100B 98.8 1.5E-08 3.2E-13 84.8 7.5 65 431-534 7-79 (88)
22 KOG0037|consensus 98.8 2.6E-08 5.6E-13 94.7 8.6 89 361-456 122-216 (221)
23 KOG0033|consensus 98.8 5.5E-09 1.2E-13 101.2 4.1 92 257-352 198-304 (355)
24 KOG0377|consensus 98.7 1.7E-07 3.7E-12 96.6 13.0 135 361-534 462-615 (631)
25 KOG2861|consensus 98.7 1.2E-08 2.5E-13 106.3 4.5 59 184-242 165-223 (399)
26 PF13499 EF-hand_7: EF-hand do 98.7 6.9E-08 1.5E-12 75.9 7.4 66 364-458 1-66 (66)
27 KOG2643|consensus 98.6 7.9E-08 1.7E-12 99.4 8.7 158 363-535 233-454 (489)
28 cd05031 S-100A10_like S-100A10 98.6 7.6E-08 1.6E-12 81.5 7.0 65 431-534 7-79 (94)
29 cd05026 S-100Z S-100Z: S-100Z 98.6 9E-08 1.9E-12 81.0 7.2 65 431-534 9-81 (93)
30 cd05029 S-100A6 S-100A6: S-100 98.6 9E-08 1.9E-12 80.1 7.1 65 431-534 9-79 (88)
31 cd05025 S-100A1 S-100A1: S-100 98.6 1.2E-07 2.6E-12 79.9 7.3 65 431-534 8-80 (92)
32 KOG4223|consensus 98.6 4.3E-07 9.4E-12 91.1 11.1 145 355-537 68-231 (325)
33 KOG4223|consensus 98.5 1.3E-07 2.9E-12 94.7 6.6 131 361-530 161-301 (325)
34 cd00052 EH Eps15 homology doma 98.5 2.7E-07 5.8E-12 72.3 6.8 59 435-534 2-61 (67)
35 smart00027 EH Eps15 homology d 98.5 4.1E-07 9E-12 77.3 7.6 63 431-534 9-72 (96)
36 KOG0032|consensus 98.5 1.4E-07 3.1E-12 99.8 5.3 115 257-377 224-353 (382)
37 cd05022 S-100A13 S-100A13: S-1 98.5 3.2E-07 6.9E-12 76.9 6.3 64 360-423 5-75 (89)
38 cd00213 S-100 S-100: S-100 dom 98.5 4E-07 8.6E-12 76.0 6.7 66 431-535 7-80 (88)
39 cd05023 S-100A11 S-100A11: S-1 98.4 6.4E-07 1.4E-11 75.1 7.5 65 431-534 8-80 (89)
40 PTZ00183 centrin; Provisional 98.4 1.4E-06 3.1E-11 80.0 10.0 92 431-534 16-118 (158)
41 PF13833 EF-hand_8: EF-hand do 98.4 4.9E-07 1.1E-11 68.1 5.6 51 445-534 1-53 (54)
42 smart00027 EH Eps15 homology d 98.4 8.4E-07 1.8E-11 75.4 7.7 65 356-422 3-71 (96)
43 cd05027 S-100B S-100B: S-100B 98.4 8.1E-07 1.8E-11 74.3 7.3 64 360-423 5-79 (88)
44 cd00051 EFh EF-hand, calcium b 98.4 1.4E-06 3E-11 65.9 7.6 61 434-533 2-63 (63)
45 PTZ00184 calmodulin; Provision 98.3 4.7E-06 1E-10 75.5 10.7 92 431-534 10-112 (149)
46 KOG0028|consensus 98.3 3.6E-06 7.9E-11 76.4 9.3 94 431-536 32-136 (172)
47 PF02582 DUF155: Uncharacteris 98.3 5.5E-07 1.2E-11 85.2 3.4 53 188-242 1-53 (175)
48 KOG0044|consensus 98.2 1.4E-05 3.1E-10 76.2 11.8 101 395-534 22-128 (193)
49 cd00213 S-100 S-100: S-100 dom 98.2 3.7E-06 8E-11 70.1 6.3 65 359-423 4-79 (88)
50 cd05029 S-100A6 S-100A6: S-100 98.2 5.5E-06 1.2E-10 69.3 7.2 65 359-423 6-79 (88)
51 cd05026 S-100Z S-100Z: S-100Z 98.2 5.3E-06 1.1E-10 70.2 7.2 64 360-423 7-81 (93)
52 cd05031 S-100A10_like S-100A10 98.2 4.7E-06 1E-10 70.5 6.8 63 361-423 6-79 (94)
53 PF14658 EF-hand_9: EF-hand do 98.2 5.1E-06 1.1E-10 64.9 6.3 60 436-534 2-64 (66)
54 cd00252 SPARC_EC SPARC_EC; ext 98.1 6.5E-06 1.4E-10 72.4 7.3 60 431-533 47-107 (116)
55 cd05025 S-100A1 S-100A1: S-100 98.1 6.8E-06 1.5E-10 69.2 7.2 62 362-423 8-80 (92)
56 KOG0031|consensus 98.1 2E-05 4.4E-10 71.1 10.0 91 431-535 31-130 (171)
57 cd05030 calgranulins Calgranul 98.1 7.4E-06 1.6E-10 68.5 6.5 66 431-535 7-80 (88)
58 KOG0604|consensus 98.1 1.3E-06 2.8E-11 87.3 1.8 64 259-322 251-329 (400)
59 cd00052 EH Eps15 homology doma 98.1 7.6E-06 1.6E-10 64.0 5.5 56 366-423 2-61 (67)
60 KOG0040|consensus 98.1 4.8E-05 1E-09 88.3 13.7 106 356-469 2246-2363(2399)
61 KOG2562|consensus 98.0 3.6E-05 7.7E-10 80.7 11.1 99 358-460 273-379 (493)
62 PLN02964 phosphatidylserine de 97.9 4.3E-05 9.4E-10 85.2 10.6 63 434-535 181-244 (644)
63 KOG0041|consensus 97.9 3.3E-05 7.1E-10 72.6 8.1 106 353-458 89-201 (244)
64 KOG0751|consensus 97.9 8.6E-05 1.9E-09 78.1 12.0 159 361-535 31-208 (694)
65 PF00036 EF-hand_1: EF hand; 97.9 1.7E-05 3.7E-10 52.0 3.7 29 433-461 1-29 (29)
66 COG1723 Uncharacterized conser 97.9 9.2E-06 2E-10 81.5 3.3 54 183-238 102-155 (331)
67 KOG0030|consensus 97.8 0.00015 3.3E-09 64.5 10.2 95 429-534 8-116 (152)
68 cd05023 S-100A11 S-100A11: S-1 97.8 6.8E-05 1.5E-09 62.9 7.2 64 360-423 6-80 (89)
69 cd00051 EFh EF-hand, calcium b 97.8 5.2E-05 1.1E-09 57.0 5.5 55 365-419 2-60 (63)
70 PF13833 EF-hand_8: EF-hand do 97.7 7.2E-05 1.6E-09 56.2 5.8 30 377-406 2-32 (54)
71 KOG0615|consensus 97.7 1.6E-05 3.4E-10 82.6 2.7 65 258-322 368-444 (475)
72 PF13405 EF-hand_6: EF-hand do 97.7 3.8E-05 8.1E-10 51.1 3.6 30 433-462 1-31 (31)
73 KOG0751|consensus 97.7 0.00023 4.9E-09 75.0 11.1 164 364-532 109-312 (694)
74 KOG0041|consensus 97.7 9.1E-05 2E-09 69.7 6.9 68 431-537 98-166 (244)
75 PF14658 EF-hand_9: EF-hand do 97.7 9.8E-05 2.1E-09 57.8 5.8 57 367-423 2-64 (66)
76 PF00036 EF-hand_1: EF hand; 97.6 5.2E-05 1.1E-09 49.7 3.1 29 364-392 1-29 (29)
77 KOG2643|consensus 97.6 0.00012 2.7E-09 76.2 7.0 119 408-535 212-347 (489)
78 KOG0599|consensus 97.6 1.8E-05 3.8E-10 78.3 0.1 64 257-320 214-288 (411)
79 KOG0034|consensus 97.5 0.00051 1.1E-08 65.5 9.4 95 366-460 69-175 (187)
80 PF13405 EF-hand_6: EF-hand do 97.5 0.00012 2.7E-09 48.5 3.2 30 364-393 1-31 (31)
81 cd05024 S-100A10 S-100A10: A s 97.4 0.00054 1.2E-08 57.4 7.5 64 431-534 7-76 (91)
82 KOG0607|consensus 97.4 4.2E-05 9.2E-10 77.2 0.8 63 258-320 278-366 (463)
83 cd05030 calgranulins Calgranul 97.4 0.00039 8.5E-09 58.1 5.9 63 360-422 5-78 (88)
84 cd00252 SPARC_EC SPARC_EC; ext 97.4 0.00042 9.1E-09 61.0 6.2 64 358-458 43-106 (116)
85 PF13202 EF-hand_5: EF hand; P 97.2 0.0004 8.8E-09 43.8 3.1 25 434-458 1-25 (25)
86 PF13202 EF-hand_5: EF hand; P 96.8 0.0011 2.4E-08 41.8 2.6 25 365-389 1-25 (25)
87 KOG0036|consensus 96.8 0.0079 1.7E-07 62.7 10.1 95 431-534 13-110 (463)
88 PRK12309 transaldolase/EF-hand 96.7 0.004 8.8E-08 66.1 7.8 55 428-534 330-385 (391)
89 PF12763 EF-hand_4: Cytoskelet 96.6 0.0078 1.7E-07 51.9 7.2 61 431-533 9-70 (104)
90 PF12763 EF-hand_4: Cytoskelet 96.4 0.0086 1.9E-07 51.7 6.5 67 356-458 3-69 (104)
91 PF14788 EF-hand_10: EF hand; 96.4 0.0072 1.6E-07 44.8 4.9 46 449-533 2-48 (51)
92 cd05024 S-100A10 S-100A10: A s 96.3 0.015 3.3E-07 48.7 7.1 30 361-391 6-35 (91)
93 KOG4666|consensus 96.2 0.0034 7.3E-08 63.3 2.9 89 408-537 272-362 (412)
94 KOG2562|consensus 96.2 0.021 4.6E-07 60.5 8.8 137 364-529 226-374 (493)
95 KOG0377|consensus 96.2 0.0084 1.8E-07 62.8 5.7 59 363-421 547-613 (631)
96 KOG0046|consensus 96.0 0.015 3.2E-07 62.2 7.0 70 355-425 11-87 (627)
97 KOG4251|consensus 96.0 0.046 9.9E-07 53.3 9.5 96 363-458 140-262 (362)
98 PRK12309 transaldolase/EF-hand 95.8 0.033 7.2E-07 59.2 8.5 54 361-460 332-385 (391)
99 KOG4065|consensus 95.5 0.03 6.5E-07 48.4 5.5 66 431-531 66-142 (144)
100 KOG0040|consensus 95.5 0.029 6.3E-07 66.3 7.0 73 431-535 2252-2325(2399)
101 KOG4251|consensus 95.4 0.2 4.3E-06 49.0 11.4 30 362-391 100-129 (362)
102 PF10591 SPARC_Ca_bdg: Secrete 95.3 0.0093 2E-07 52.3 1.9 59 431-530 53-112 (113)
103 KOG0169|consensus 95.1 0.17 3.8E-06 56.8 11.5 108 357-469 130-243 (746)
104 smart00054 EFh EF-hand, calciu 94.9 0.03 6.6E-07 34.6 3.1 27 434-460 2-28 (29)
105 KOG0046|consensus 94.5 0.084 1.8E-06 56.7 6.8 65 431-535 18-86 (627)
106 KOG1707|consensus 94.5 0.22 4.7E-06 54.7 9.9 107 356-462 188-345 (625)
107 KOG0038|consensus 94.4 0.12 2.7E-06 46.6 6.7 71 351-422 97-176 (189)
108 smart00054 EFh EF-hand, calciu 94.2 0.043 9.3E-07 33.9 2.4 27 365-391 2-28 (29)
109 KOG1029|consensus 93.4 0.16 3.5E-06 56.7 6.6 60 432-532 195-255 (1118)
110 PF05042 Caleosin: Caleosin re 93.3 1.2 2.5E-05 41.8 11.1 98 365-462 9-126 (174)
111 KOG4065|consensus 93.1 0.27 5.9E-06 42.6 6.1 64 355-420 61-142 (144)
112 KOG0605|consensus 92.8 0.045 9.8E-07 59.2 1.2 63 258-320 375-450 (550)
113 KOG0035|consensus 92.5 0.39 8.4E-06 55.4 8.2 100 356-456 740-848 (890)
114 KOG0585|consensus 92.3 0.055 1.2E-06 57.9 1.1 64 258-323 306-380 (576)
115 PF14788 EF-hand_10: EF hand; 92.3 0.35 7.5E-06 36.0 5.0 30 431-460 20-49 (51)
116 KOG0575|consensus 91.9 0.078 1.7E-06 58.2 1.7 75 242-320 186-274 (592)
117 PF09279 EF-hand_like: Phospho 91.8 0.43 9.3E-06 39.0 5.6 64 433-536 1-71 (83)
118 KOG0588|consensus 91.3 0.095 2.1E-06 58.2 1.6 61 257-320 198-268 (786)
119 KOG4236|consensus 90.9 0.13 2.7E-06 55.8 2.0 64 258-321 753-825 (888)
120 PF00352 TBP: Transcription fa 90.2 0.94 2E-05 37.5 6.3 70 4-86 10-80 (86)
121 cd07848 STKc_CDKL5 Catalytic d 89.5 0.17 3.7E-06 50.5 1.6 29 290-318 255-287 (287)
122 PF08726 EFhand_Ca_insen: Ca2+ 89.3 0.38 8.2E-06 38.2 3.0 28 430-458 4-31 (69)
123 KOG0583|consensus 89.2 0.18 4E-06 53.5 1.5 62 258-320 210-280 (370)
124 KOG0603|consensus 88.8 0.16 3.4E-06 56.2 0.7 60 258-318 500-566 (612)
125 PF10591 SPARC_Ca_bdg: Secrete 88.5 0.18 3.9E-06 44.2 0.7 65 357-456 48-112 (113)
126 cd05628 STKc_NDR1 Catalytic do 88.3 0.24 5.3E-06 51.8 1.8 63 258-320 223-298 (363)
127 cd05626 STKc_LATS2 Catalytic d 88.0 0.28 6E-06 51.8 2.0 63 258-320 235-310 (381)
128 PTZ00036 glycogen synthase kin 87.8 0.34 7.3E-06 52.5 2.5 63 258-320 258-356 (440)
129 PF09279 EF-hand_like: Phospho 87.6 1.7 3.7E-05 35.4 6.1 59 364-423 1-69 (83)
130 cd07871 STKc_PCTAIRE3 Catalyti 87.1 0.33 7.2E-06 48.8 1.8 29 290-318 256-288 (288)
131 KOG4666|consensus 86.8 1.2 2.5E-05 45.6 5.4 100 361-462 257-361 (412)
132 cd06609 STKc_MST3_like Catalyt 86.7 0.43 9.3E-06 47.3 2.4 84 250-336 179-272 (274)
133 cd05621 STKc_ROCK2 Catalytic d 86.3 0.37 8.1E-06 50.8 1.8 63 258-320 234-309 (370)
134 cd05596 STKc_ROCK Catalytic do 85.9 0.42 9E-06 50.4 1.9 63 258-320 234-309 (370)
135 cd07869 STKc_PFTAIRE1 Catalyti 85.3 0.26 5.7E-06 49.9 0.1 31 291-321 260-294 (303)
136 cd05598 STKc_LATS Catalytic do 85.1 0.61 1.3E-05 48.9 2.7 63 258-320 231-306 (376)
137 KOG0592|consensus 84.8 0.38 8.3E-06 52.4 1.0 63 258-320 274-343 (604)
138 cd05601 STKc_CRIK Catalytic do 84.7 0.67 1.5E-05 47.6 2.7 63 258-320 196-268 (330)
139 cd06640 STKc_MST4 Catalytic do 84.6 0.61 1.3E-05 46.4 2.3 85 250-336 182-275 (277)
140 KOG0616|consensus 84.3 0.37 8.1E-06 48.9 0.6 63 258-320 228-302 (355)
141 cd05629 STKc_NDR_like_fungal C 83.9 0.74 1.6E-05 48.4 2.7 63 258-320 235-310 (377)
142 KOG0042|consensus 83.9 1.7 3.7E-05 47.6 5.3 71 356-426 586-660 (680)
143 PTZ00263 protein kinase A cata 83.7 0.45 9.8E-06 49.1 1.0 63 258-320 202-276 (329)
144 KOG3555|consensus 83.4 1.8 3.9E-05 44.6 4.9 63 431-536 249-312 (434)
145 cd07868 STKc_CDK8 Catalytic do 83.3 0.64 1.4E-05 47.2 1.9 27 292-318 287-317 (317)
146 cd06608 STKc_myosinIII_like Ca 83.2 0.64 1.4E-05 45.7 1.7 67 250-318 199-275 (275)
147 KOG0598|consensus 82.6 0.54 1.2E-05 48.9 1.0 63 258-320 212-286 (357)
148 cd05623 STKc_MRCK_alpha Cataly 82.6 0.73 1.6E-05 47.5 2.0 63 258-320 195-271 (332)
149 cd06643 STKc_SLK Catalytic dom 82.5 0.81 1.8E-05 45.6 2.2 72 258-329 195-276 (282)
150 cd07842 STKc_CDK8_like Catalyt 82.4 0.59 1.3E-05 47.3 1.1 29 290-318 284-316 (316)
151 COG2101 SPT15 TATA-box binding 82.3 11 0.00023 35.4 9.2 74 4-90 14-92 (185)
152 cd05611 STKc_Rim15_like Cataly 82.3 0.7 1.5E-05 45.3 1.6 63 258-320 180-256 (260)
153 cd05625 STKc_LATS1 Catalytic d 81.9 0.76 1.7E-05 48.4 1.8 63 258-320 235-310 (382)
154 cd05597 STKc_DMPK_like Catalyt 81.8 0.83 1.8E-05 47.1 2.0 63 258-320 195-271 (331)
155 cd07872 STKc_PCTAIRE2 Catalyti 81.8 0.77 1.7E-05 46.6 1.8 31 290-320 257-291 (309)
156 cd05599 STKc_NDR_like Catalyti 81.8 0.88 1.9E-05 47.4 2.2 63 258-320 226-301 (364)
157 cd07863 STKc_CDK4 Catalytic do 81.7 0.47 1E-05 47.3 0.2 29 290-318 256-288 (288)
158 PTZ00426 cAMP-dependent protei 81.3 0.7 1.5E-05 48.1 1.3 63 258-320 215-289 (340)
159 cd04517 TLF TBP-like factors ( 81.1 5.7 0.00012 37.5 7.2 68 3-84 7-76 (174)
160 cd07861 STKc_CDK1_euk Catalyti 81.0 0.7 1.5E-05 45.9 1.1 67 250-318 183-285 (285)
161 cd06639 STKc_myosinIIIB Cataly 80.7 0.91 2E-05 45.5 1.8 62 258-319 220-291 (291)
162 PHA03390 pk1 serine/threonine- 80.5 0.87 1.9E-05 45.3 1.6 67 251-319 188-266 (267)
163 cd05573 STKc_ROCK_NDR_like Cat 80.4 1.2 2.5E-05 46.0 2.6 63 258-320 217-290 (350)
164 cd05600 STKc_Sid2p_Dbf2p Catal 80.0 1.2 2.6E-05 45.8 2.5 63 258-320 185-262 (333)
165 cd06610 STKc_OSR1_SPAK Catalyt 79.7 1.1 2.4E-05 43.7 2.1 61 258-318 194-267 (267)
166 cd05608 STKc_GRK1 Catalytic do 79.6 1.1 2.3E-05 44.9 1.9 63 258-320 184-262 (280)
167 cd07859 STKc_TDY_MAPK_plant Ca 79.3 1 2.2E-05 46.1 1.7 33 288-320 259-295 (338)
168 cd05571 STKc_PKB Catalytic dom 79.3 1 2.2E-05 46.2 1.7 63 258-320 182-256 (323)
169 cd07873 STKc_PCTAIRE1 Catalyti 79.1 1 2.3E-05 45.4 1.7 31 290-320 257-291 (301)
170 cd05612 STKc_PRKX_like Catalyt 79.1 0.8 1.7E-05 46.2 0.8 68 251-320 180-259 (291)
171 KOG3866|consensus 78.8 3.3 7.2E-05 42.0 5.0 129 353-535 191-325 (442)
172 cd05631 STKc_GRK4 Catalytic do 78.7 0.86 1.9E-05 45.7 0.9 64 258-321 188-267 (285)
173 cd05586 STKc_Sck1_like Catalyt 78.5 1.1 2.3E-05 46.1 1.6 63 258-320 184-258 (330)
174 cd06655 STKc_PAK2 Catalytic do 78.5 1.2 2.5E-05 45.2 1.8 70 250-321 196-275 (296)
175 cd05622 STKc_ROCK1 Catalytic d 78.2 1.1 2.5E-05 47.1 1.7 63 258-320 234-309 (371)
176 cd06612 STKc_MST1_2 Catalytic 78.2 1.3 2.8E-05 43.1 2.0 67 250-318 180-256 (256)
177 cd05627 STKc_NDR2 Catalytic do 78.1 1.6 3.4E-05 45.6 2.7 63 258-320 223-298 (360)
178 PLN02952 phosphoinositide phos 78.0 11 0.00025 42.3 9.5 61 408-469 13-76 (599)
179 cd07867 STKc_CDC2L6 Catalytic 77.8 1.3 2.8E-05 44.9 1.9 27 292-318 287-317 (317)
180 cd06658 STKc_PAK5 Catalytic do 77.6 1.3 2.8E-05 44.7 1.8 71 250-322 199-279 (292)
181 cd00652 TBP_TLF TATA box bindi 77.6 9 0.0002 36.2 7.4 72 4-87 99-171 (174)
182 cd06637 STKc_TNIK Catalytic do 77.3 1.2 2.6E-05 43.9 1.4 67 250-318 197-272 (272)
183 cd04517 TLF TBP-like factors ( 77.2 8 0.00017 36.5 6.9 71 5-87 100-171 (174)
184 cd06656 STKc_PAK3 Catalytic do 77.1 1.4 3E-05 44.6 1.9 63 258-321 202-275 (297)
185 cd06648 STKc_PAK_II Catalytic 77.1 1.3 2.8E-05 44.4 1.6 65 258-322 202-276 (285)
186 cd07860 STKc_CDK2_3 Catalytic 77.0 0.81 1.8E-05 45.5 0.2 67 250-318 182-284 (284)
187 cd04516 TBP_eukaryotes eukaryo 76.7 9.2 0.0002 36.1 7.2 72 4-87 98-170 (174)
188 cd05590 STKc_nPKC_eta Catalyti 76.7 1 2.2E-05 46.2 0.8 63 258-320 183-258 (320)
189 cd05574 STKc_phototropin_like 76.6 1.3 2.9E-05 44.9 1.6 63 258-320 219-294 (316)
190 cd05584 STKc_p70S6K Catalytic 76.6 1.2 2.6E-05 45.6 1.3 63 258-320 187-261 (323)
191 cd05624 STKc_MRCK_beta Catalyt 76.5 1.7 3.6E-05 44.9 2.3 63 258-320 195-271 (331)
192 cd05591 STKc_nPKC_epsilon Cata 76.3 1.2 2.6E-05 45.6 1.2 63 258-320 183-259 (321)
193 PF05517 p25-alpha: p25-alpha 76.2 7.7 0.00017 35.8 6.4 35 435-469 2-42 (154)
194 cd05585 STKc_YPK1_like Catalyt 76.1 1.1 2.3E-05 45.7 0.8 63 258-320 180-252 (312)
195 KOG0035|consensus 75.9 6.3 0.00014 45.9 6.8 39 431-469 746-784 (890)
196 cd07862 STKc_CDK6 Catalytic do 75.9 0.91 2E-05 45.4 0.1 29 290-318 258-290 (290)
197 PF05042 Caleosin: Caleosin re 75.9 7.8 0.00017 36.4 6.2 98 432-538 7-128 (174)
198 KOG4717|consensus 75.4 1.2 2.6E-05 48.5 0.8 64 257-320 205-275 (864)
199 cd06657 STKc_PAK4 Catalytic do 75.3 1.6 3.4E-05 44.1 1.8 70 251-322 198-277 (292)
200 cd05630 STKc_GRK6 Catalytic do 75.2 1.3 2.8E-05 44.5 1.0 63 258-320 188-266 (285)
201 PLN03225 Serine/threonine-prot 75.2 4.2 9.1E-05 45.7 5.2 26 296-321 427-456 (566)
202 cd07845 STKc_CDK10 Catalytic d 74.6 1.7 3.6E-05 44.1 1.7 32 291-322 262-297 (309)
203 cd06624 STKc_ASK Catalytic dom 74.4 1.7 3.7E-05 42.8 1.7 61 258-318 198-268 (268)
204 cd07837 STKc_CdkB_plant Cataly 74.2 1.2 2.6E-05 44.5 0.5 31 289-319 261-295 (295)
205 cd05575 STKc_SGK Catalytic dom 73.9 1.8 3.8E-05 44.4 1.7 63 258-320 183-256 (323)
206 cd05593 STKc_PKB_gamma Catalyt 73.2 1.8 3.9E-05 44.6 1.5 63 258-320 182-256 (328)
207 cd05620 STKc_nPKC_delta Cataly 73.2 1.4 3E-05 45.1 0.7 63 258-320 183-253 (316)
208 cd00652 TBP_TLF TATA box bindi 73.2 14 0.0003 34.9 7.4 70 3-85 6-77 (174)
209 cd05579 STKc_MAST_like Catalyt 73.0 1.5 3.2E-05 42.7 0.8 63 258-320 188-262 (265)
210 cd05570 STKc_PKC Catalytic dom 73.0 1.5 3.2E-05 45.0 0.8 63 258-320 183-257 (318)
211 cd06654 STKc_PAK1 Catalytic do 72.9 1.9 4.2E-05 43.5 1.7 67 251-320 198-275 (296)
212 cd07835 STKc_CDK1_like Catalyt 72.8 1.8 4E-05 42.9 1.5 67 250-318 181-283 (283)
213 cd06611 STKc_SLK_like Catalyti 72.2 2.2 4.8E-05 42.3 1.9 70 250-321 189-268 (280)
214 cd06917 STKc_NAK1_like Catalyt 72.2 3 6.5E-05 41.2 2.9 71 250-322 183-262 (277)
215 KOG0042|consensus 71.9 5.4 0.00012 43.9 4.7 63 433-534 594-657 (680)
216 PHA03207 serine/threonine kina 71.9 2.1 4.6E-05 45.3 1.8 32 291-322 347-382 (392)
217 cd07876 STKc_JNK2 Catalytic do 71.9 1.6 3.4E-05 45.5 0.8 30 291-320 287-320 (359)
218 cd06636 STKc_MAP4K4_6 Catalyti 71.8 2 4.3E-05 42.7 1.5 66 250-318 207-282 (282)
219 cd06629 STKc_MAPKKK_Bck1_like 71.8 2.5 5.4E-05 41.6 2.2 61 258-318 199-272 (272)
220 PF09069 EF-hand_3: EF-hand; 71.8 26 0.00057 29.4 7.8 77 431-537 2-78 (90)
221 cd06644 STKc_STK10_LOK Catalyt 71.2 3.3 7.2E-05 41.4 2.9 69 250-320 196-274 (292)
222 KOG2243|consensus 71.1 5.8 0.00013 47.4 4.9 61 436-536 4061-4122(5019)
223 cd08226 PK_STRAD_beta Pseudoki 71.0 2 4.4E-05 44.0 1.4 30 291-320 280-313 (328)
224 cd07855 STKc_ERK5 Catalytic do 70.9 1.8 3.8E-05 44.6 0.9 32 289-320 264-299 (334)
225 PLN00181 protein SPA1-RELATED; 70.8 2 4.3E-05 50.2 1.4 64 258-321 202-271 (793)
226 cd06633 STKc_TAO3 Catalytic do 70.8 3.7 8.1E-05 41.8 3.3 69 250-320 201-278 (313)
227 KOG1955|consensus 70.7 11 0.00023 40.9 6.5 37 356-392 224-260 (737)
228 KOG0580|consensus 70.7 1.8 3.8E-05 42.9 0.8 59 258-320 209-278 (281)
229 cd06659 STKc_PAK6 Catalytic do 70.6 2.4 5.2E-05 42.9 1.7 70 250-321 198-277 (297)
230 cd06605 PKc_MAPKK Catalytic do 70.2 1.8 3.9E-05 42.4 0.7 63 258-320 186-262 (265)
231 cd07853 STKc_NLK Catalytic dom 70.1 2.5 5.4E-05 44.3 1.8 32 290-321 259-294 (372)
232 PRK00394 transcription factor; 70.0 17 0.00036 34.6 7.1 70 5-86 99-170 (179)
233 cd05614 STKc_MSK2_N N-terminal 69.9 2.8 6.1E-05 43.0 2.1 63 258-320 194-272 (332)
234 cd05594 STKc_PKB_alpha Catalyt 69.9 2.7 5.8E-05 43.1 1.9 63 258-320 183-257 (325)
235 cd07847 STKc_CDKL1_4 Catalytic 69.5 2.5 5.5E-05 41.8 1.6 30 289-318 253-286 (286)
236 KOG0612|consensus 69.3 1.8 4E-05 51.2 0.6 75 243-320 245-343 (1317)
237 PLN00062 TATA-box-binding prot 69.2 19 0.0004 34.2 7.3 72 4-87 98-170 (179)
238 KOG0578|consensus 69.0 4 8.7E-05 44.8 3.1 62 259-320 457-528 (550)
239 cd05604 STKc_SGK3 Catalytic do 69.0 2.6 5.5E-05 43.2 1.6 63 258-320 183-256 (325)
240 cd05607 STKc_GRK7 Catalytic do 68.7 2.8 6E-05 41.8 1.7 63 258-320 181-259 (277)
241 cd07854 STKc_MAPK4_6 Catalytic 68.5 2 4.4E-05 44.4 0.7 31 290-320 271-305 (342)
242 KOG1707|consensus 68.5 7.8 0.00017 43.0 5.1 68 356-423 308-377 (625)
243 KOG4578|consensus 68.4 3 6.4E-05 42.7 1.8 69 431-537 332-401 (421)
244 PLN03224 probable serine/threo 68.4 2.7 5.9E-05 46.5 1.7 35 285-319 463-504 (507)
245 cd04518 TBP_archaea archaeal T 68.2 18 0.00038 34.2 6.9 68 4-84 8-76 (174)
246 cd06607 STKc_TAO Catalytic dom 68.1 2.9 6.3E-05 42.3 1.7 65 258-322 201-274 (307)
247 cd07858 STKc_TEY_MAPK_plant Ca 67.6 3.1 6.8E-05 42.8 1.9 33 288-320 260-296 (337)
248 KOG1029|consensus 67.5 7.7 0.00017 44.1 4.9 37 357-393 189-225 (1118)
249 cd07875 STKc_JNK1 Catalytic do 67.5 3 6.4E-05 43.5 1.7 29 292-320 291-323 (364)
250 PHA03209 serine/threonine kina 67.4 2.9 6.2E-05 43.7 1.6 32 289-320 321-356 (357)
251 cd06625 STKc_MEKK3_like Cataly 67.2 2.3 4.9E-05 41.6 0.7 61 258-318 194-263 (263)
252 cd05577 STKc_GRK Catalytic dom 67.2 3.5 7.5E-05 40.9 2.1 69 250-320 175-259 (277)
253 cd06626 STKc_MEKK4 Catalytic d 67.2 3.3 7.1E-05 40.4 1.9 61 258-318 193-264 (264)
254 cd06630 STKc_MEKK1 Catalytic d 67.0 3.1 6.8E-05 40.7 1.7 62 258-319 195-268 (268)
255 cd07831 STKc_MOK Catalytic dom 66.8 2.1 4.5E-05 42.3 0.4 29 290-318 250-282 (282)
256 cd05619 STKc_nPKC_theta Cataly 66.3 2.4 5.2E-05 43.4 0.7 63 258-320 183-253 (316)
257 KOG0610|consensus 66.1 3.6 7.8E-05 43.7 2.0 61 258-320 322-397 (459)
258 cd07832 STKc_CCRK Catalytic do 66.1 3.8 8.3E-05 40.5 2.1 30 290-319 253-286 (286)
259 cd05122 PKc_STE Catalytic doma 65.9 3.3 7.1E-05 39.7 1.5 60 258-317 184-253 (253)
260 cd06615 PKc_MEK Catalytic doma 65.8 2.9 6.2E-05 42.5 1.2 31 291-321 259-293 (308)
261 cd07851 STKc_p38 Catalytic dom 64.9 2.4 5.2E-05 43.9 0.4 31 290-320 269-303 (343)
262 cd05587 STKc_cPKC Catalytic do 64.9 2.9 6.2E-05 42.9 1.0 63 258-320 188-262 (324)
263 PLN00062 TATA-box-binding prot 64.7 23 0.0005 33.6 6.9 69 3-84 6-76 (179)
264 cd08227 PK_STRAD_alpha Pseudok 64.5 3.1 6.6E-05 42.7 1.1 30 291-320 279-312 (327)
265 cd06647 STKc_PAK_I Catalytic d 64.2 5.2 0.00011 40.2 2.7 69 250-320 196-274 (293)
266 cd05610 STKc_MASTL Catalytic d 64.2 3.2 7E-05 47.6 1.3 63 258-320 567-639 (669)
267 cd08216 PK_STRAD Pseudokinase 64.0 3.3 7.1E-05 41.9 1.2 30 292-321 268-301 (314)
268 cd06631 STKc_YSK4 Catalytic do 63.6 2.9 6.4E-05 41.0 0.7 66 250-318 189-265 (265)
269 cd06619 PKc_MKK5 Catalytic dom 63.3 3.3 7.1E-05 41.2 1.0 71 250-322 174-260 (279)
270 cd04518 TBP_archaea archaeal T 63.3 30 0.00065 32.7 7.4 68 5-85 100-168 (174)
271 cd07870 STKc_PFTAIRE2 Catalyti 63.0 4.3 9.4E-05 40.5 1.9 27 292-318 261-291 (291)
272 cd05576 STKc_RPK118_like Catal 62.7 3.5 7.5E-05 40.0 1.1 58 258-318 169-237 (237)
273 KOG0169|consensus 62.7 11 0.00024 42.9 5.0 95 431-535 135-233 (746)
274 cd07866 STKc_BUR1 Catalytic do 62.6 2.8 6E-05 42.1 0.3 30 289-318 278-311 (311)
275 cd07846 STKc_CDKL2_3 Catalytic 62.5 4 8.8E-05 40.4 1.5 31 288-318 252-286 (286)
276 cd05633 STKc_GRK3 Catalytic do 62.5 4.3 9.4E-05 40.5 1.7 63 258-320 183-260 (279)
277 cd05606 STKc_beta_ARK Catalyti 62.4 4.7 0.0001 40.2 2.0 63 258-320 183-260 (278)
278 PLN00034 mitogen-activated pro 62.4 4.2 9.1E-05 42.2 1.7 64 258-321 260-334 (353)
279 cd06635 STKc_TAO1 Catalytic do 62.3 5.3 0.00012 40.6 2.4 72 251-324 206-286 (317)
280 cd06616 PKc_MKK4 Catalytic dom 62.3 4.1 8.9E-05 40.5 1.5 63 258-320 197-272 (288)
281 cd06642 STKc_STK25-YSK1 Cataly 62.3 5.2 0.00011 39.6 2.2 63 258-320 188-258 (277)
282 cd06641 STKc_MST3 Catalytic do 62.1 5 0.00011 39.8 2.1 70 250-321 182-259 (277)
283 KOG1955|consensus 62.1 15 0.00033 39.7 5.7 62 431-533 230-292 (737)
284 cd06645 STKc_MAP4K3 Catalytic 62.1 4 8.8E-05 40.0 1.4 66 250-317 190-267 (267)
285 cd07838 STKc_CDK4_6_like Catal 62.0 2.7 5.9E-05 41.5 0.2 29 290-318 255-287 (287)
286 cd07850 STKc_JNK Catalytic dom 61.9 4.5 9.8E-05 41.9 1.8 30 291-320 283-316 (353)
287 cd06622 PKc_MAPKK_PBS2_like Ca 61.0 6 0.00013 39.3 2.5 63 258-320 194-267 (286)
288 cd05595 STKc_PKB_beta Catalyti 60.6 3.7 8E-05 42.1 0.9 63 258-320 182-256 (323)
289 cd05589 STKc_PKN Catalytic dom 60.6 3.7 8.1E-05 42.0 0.9 63 258-320 188-262 (324)
290 cd08225 STKc_Nek5 Catalytic do 60.3 3.5 7.6E-05 40.0 0.6 61 258-318 189-257 (257)
291 cd06646 STKc_MAP4K5 Catalytic 60.1 4.8 0.0001 39.5 1.5 60 258-317 196-267 (267)
292 cd07841 STKc_CDK7 Catalytic do 59.5 3.9 8.5E-05 40.9 0.8 34 289-322 252-289 (298)
293 cd06618 PKc_MKK7 Catalytic dom 59.4 5.3 0.00011 40.1 1.8 69 250-320 199-278 (296)
294 cd06634 STKc_TAO2 Catalytic do 59.4 6.9 0.00015 39.6 2.6 69 251-321 196-273 (308)
295 cd07829 STKc_CDK_like Catalyti 59.3 5.2 0.00011 39.4 1.6 29 290-318 250-282 (282)
296 cd07849 STKc_ERK1_2_like Catal 59.1 3.7 7.9E-05 42.3 0.5 31 290-320 263-297 (336)
297 cd05602 STKc_SGK1 Catalytic do 59.0 4.4 9.5E-05 41.5 1.1 63 258-320 183-256 (325)
298 PRK00394 transcription factor; 58.8 37 0.00081 32.2 7.2 68 4-84 7-75 (179)
299 cd05605 STKc_GRK4_like Catalyt 58.5 4.8 0.0001 40.3 1.2 63 258-320 188-266 (285)
300 PF00069 Pkinase: Protein kina 58.4 3.4 7.3E-05 40.1 0.1 61 258-318 186-260 (260)
301 cd08223 STKc_Nek4 Catalytic do 58.4 3.9 8.3E-05 39.8 0.5 61 258-318 189-257 (257)
302 cd07839 STKc_CDK5 Catalytic do 58.0 5.4 0.00012 39.5 1.5 29 290-318 252-284 (284)
303 PTZ00024 cyclin-dependent prot 57.9 6 0.00013 40.5 1.9 32 290-321 284-319 (335)
304 cd06606 STKc_MAPKKK Catalytic 57.8 4.6 9.9E-05 38.8 0.9 61 258-318 190-260 (260)
305 cd06628 STKc_MAPKKK_Byr2_like 57.4 5.1 0.00011 39.2 1.2 60 258-318 199-267 (267)
306 cd05609 STKc_MAST Catalytic do 57.3 6 0.00013 39.9 1.7 63 258-320 203-278 (305)
307 PHA03211 serine/threonine kina 57.3 5.1 0.00011 43.8 1.3 32 289-320 425-460 (461)
308 cd05582 STKc_RSK_N N-terminal 56.9 5.9 0.00013 40.4 1.6 63 258-320 185-259 (318)
309 cd06617 PKc_MKK3_6 Catalytic d 56.4 5.2 0.00011 39.6 1.1 65 258-322 194-268 (283)
310 cd05123 STKc_AGC Catalytic dom 56.0 5.1 0.00011 38.6 1.0 61 258-318 180-250 (250)
311 cd07879 STKc_p38delta_MAPK13 C 55.9 6.6 0.00014 40.6 1.8 31 290-320 268-302 (342)
312 cd07834 STKc_MAPK Catalytic do 55.7 5.1 0.00011 40.9 0.9 31 290-320 260-294 (330)
313 PF09069 EF-hand_3: EF-hand; 55.7 38 0.00083 28.4 5.9 60 363-423 3-75 (90)
314 cd04516 TBP_eukaryotes eukaryo 55.7 42 0.0009 31.7 7.0 69 3-84 6-76 (174)
315 cd06638 STKc_myosinIIIA Cataly 55.5 6.6 0.00014 38.9 1.7 61 258-318 216-286 (286)
316 PTZ00284 protein kinase; Provi 55.1 5.5 0.00012 43.3 1.1 28 293-320 412-443 (467)
317 cd05572 STKc_cGK_PKG Catalytic 54.7 7.8 0.00017 37.8 2.0 63 258-320 179-257 (262)
318 KOG3555|consensus 54.7 13 0.00029 38.5 3.6 94 364-462 212-312 (434)
319 KOG0608|consensus 54.4 7.9 0.00017 43.5 2.1 64 257-320 857-933 (1034)
320 cd06613 STKc_MAP4K3_like Catal 54.3 3.7 8.1E-05 39.9 -0.3 66 250-317 185-262 (262)
321 cd06614 STKc_PAK Catalytic dom 54.2 6.6 0.00014 39.0 1.4 63 258-320 203-275 (286)
322 cd05592 STKc_nPKC_theta_delta 52.6 5.6 0.00012 40.6 0.6 63 258-320 183-253 (316)
323 KOG4347|consensus 52.4 17 0.00037 40.7 4.2 51 412-462 535-585 (671)
324 cd06651 STKc_MEKK3 Catalytic d 52.2 6.7 0.00015 38.5 1.1 61 258-319 196-265 (266)
325 PHA03212 serine/threonine kina 52.1 6.9 0.00015 41.6 1.2 31 290-320 347-381 (391)
326 cd08529 STKc_FA2-like Catalyti 51.7 7.6 0.00016 37.6 1.4 65 250-318 182-256 (256)
327 cd05616 STKc_cPKC_beta Catalyt 51.7 6.3 0.00014 40.3 0.9 63 258-320 188-262 (323)
328 cd05618 STKc_aPKC_iota Catalyt 51.6 9.9 0.00022 39.1 2.3 63 258-320 183-267 (329)
329 cd07844 STKc_PCTAIRE_like Cata 51.5 5.3 0.00011 39.8 0.2 26 293-318 262-291 (291)
330 cd07864 STKc_CDK12 Catalytic d 51.3 5.5 0.00012 39.8 0.3 31 288-318 268-302 (302)
331 KOG0663|consensus 51.0 8.1 0.00018 40.2 1.4 41 291-332 333-377 (419)
332 cd08215 STKc_Nek Catalytic dom 50.9 8.8 0.00019 36.9 1.7 59 258-318 190-258 (258)
333 cd07833 STKc_CDKL Catalytic do 50.8 8.5 0.00018 38.0 1.6 28 291-318 257-288 (288)
334 cd07877 STKc_p38alpha_MAPK14 C 50.3 9.4 0.0002 39.5 1.9 31 290-320 271-305 (345)
335 smart00220 S_TKc Serine/Threon 50.3 8.7 0.00019 36.3 1.5 61 258-318 173-244 (244)
336 cd08218 STKc_Nek1 Catalytic do 50.3 6.5 0.00014 38.2 0.7 61 258-318 188-256 (256)
337 KOG0660|consensus 50.3 9.2 0.0002 39.9 1.7 34 287-320 278-315 (359)
338 cd07878 STKc_p38beta_MAPK11 Ca 49.9 8.4 0.00018 39.6 1.5 31 290-320 269-303 (343)
339 cd06621 PKc_MAPKK_Pek1_like Ca 49.9 10 0.00023 37.7 2.1 65 258-322 190-273 (287)
340 PF05517 p25-alpha: p25-alpha 49.4 54 0.0012 30.2 6.6 58 366-423 2-69 (154)
341 KOG1265|consensus 49.3 1.1E+02 0.0023 36.1 9.8 46 411-460 204-249 (1189)
342 cd05581 STKc_PDK1 Catalytic do 48.6 8 0.00017 37.9 1.0 61 258-318 209-280 (280)
343 cd08217 STKc_Nek2 Catalytic do 48.4 6.6 0.00014 38.0 0.4 67 250-318 191-265 (265)
344 KOG4578|consensus 48.2 16 0.00036 37.5 3.1 65 364-460 334-398 (421)
345 cd05615 STKc_cPKC_alpha Cataly 47.3 8.1 0.00018 39.6 0.8 63 258-320 188-262 (323)
346 cd05578 STKc_Yank1 Catalytic d 47.1 8.1 0.00018 37.6 0.8 61 258-318 186-258 (258)
347 cd05588 STKc_aPKC Catalytic do 47.0 8.5 0.00018 39.5 0.9 63 258-320 183-267 (329)
348 cd07857 STKc_MPK1 Catalytic do 47.0 8.6 0.00019 39.4 1.0 32 289-320 262-297 (332)
349 cd06623 PKc_MAPKK_plant_like C 46.6 12 0.00027 36.2 2.0 69 250-320 181-261 (264)
350 cd06652 STKc_MEKK2 Catalytic d 45.8 11 0.00023 37.0 1.4 67 250-318 190-264 (265)
351 cd06632 STKc_MEKK1_plant Catal 45.8 11 0.00024 36.4 1.4 67 250-318 183-258 (258)
352 cd05603 STKc_SGK2 Catalytic do 45.7 11 0.00023 38.5 1.4 63 258-320 183-256 (321)
353 cd06627 STKc_Cdc7_like Catalyt 45.6 8.7 0.00019 36.9 0.7 61 258-318 186-254 (254)
354 KOG2871|consensus 45.3 20 0.00043 37.6 3.2 42 428-469 305-346 (449)
355 cd07874 STKc_JNK3 Catalytic do 45.3 11 0.00024 39.0 1.4 30 291-320 283-316 (355)
356 PTZ00266 NIMA-related protein 45.2 9.8 0.00021 45.5 1.1 68 251-320 225-300 (1021)
357 cd07865 STKc_CDK9 Catalytic do 44.8 11 0.00024 37.7 1.3 27 292-318 280-310 (310)
358 KOG0694|consensus 44.5 10 0.00022 42.8 1.1 63 258-320 555-629 (694)
359 cd06649 PKc_MEK2 Catalytic dom 44.4 13 0.00028 38.2 1.8 33 290-322 272-308 (331)
360 KOG0198|consensus 43.5 13 0.00028 38.6 1.6 32 291-322 248-283 (313)
361 cd05617 STKc_aPKC_zeta Catalyt 43.4 12 0.00026 38.4 1.3 63 258-320 183-265 (327)
362 cd07856 STKc_Sty1_Hog1 Catalyt 43.4 12 0.00025 38.5 1.3 31 290-320 259-293 (328)
363 cd05580 STKc_PKA Catalytic dom 43.0 11 0.00023 37.7 0.9 63 258-320 185-259 (290)
364 cd05632 STKc_GRK5 Catalytic do 41.4 13 0.00029 37.0 1.3 64 258-321 188-267 (285)
365 cd08222 STKc_Nek11 Catalytic d 41.3 11 0.00023 36.8 0.6 61 258-318 192-260 (260)
366 KOG0581|consensus 41.2 15 0.00033 38.5 1.7 38 290-327 306-347 (364)
367 KOG2243|consensus 39.7 32 0.0007 41.7 4.0 55 367-422 4061-4119(5019)
368 cd08220 STKc_Nek8 Catalytic do 38.8 13 0.00027 36.0 0.7 61 258-318 188-256 (256)
369 cd07843 STKc_CDC2L1 Catalytic 38.1 17 0.00037 36.2 1.5 28 291-318 262-293 (293)
370 KOG0579|consensus 38.0 23 0.00049 40.1 2.4 30 292-321 262-295 (1187)
371 PTZ00283 serine/threonine prot 38.0 16 0.00035 40.2 1.4 67 250-320 226-302 (496)
372 cd07852 STKc_MAPK15 Catalytic 37.9 16 0.00035 37.4 1.3 30 291-320 267-300 (337)
373 smart00750 KIND kinase non-cat 36.7 14 0.0003 33.7 0.5 63 258-320 91-170 (176)
374 KOG0659|consensus 36.6 19 0.00042 36.4 1.6 36 287-322 249-288 (318)
375 PF09068 EF-hand_2: EF hand; 36.6 2.4E+02 0.0053 25.1 8.5 89 357-461 35-126 (127)
376 cd06620 PKc_MAPKK_Byr1_like Ca 36.5 18 0.00039 35.9 1.4 63 258-320 189-271 (284)
377 PLN02952 phosphoinositide phos 36.2 1.8E+02 0.0039 33.0 9.1 85 376-460 13-110 (599)
378 PLN00009 cyclin-dependent kina 35.7 20 0.00043 35.7 1.5 33 289-321 254-290 (294)
379 cd06653 STKc_MEKK3_like_1 Cata 35.1 20 0.00044 35.0 1.4 61 258-318 196-264 (264)
380 KOG0039|consensus 34.8 65 0.0014 36.9 5.6 44 409-460 2-45 (646)
381 cd06650 PKc_MEK1 Catalytic dom 34.1 21 0.00045 36.8 1.4 32 291-322 271-306 (333)
382 KOG3866|consensus 33.8 1.4E+02 0.0029 30.8 6.9 26 366-391 247-272 (442)
383 cd05118 STKc_CMGC Catalytic do 33.8 21 0.00045 35.1 1.3 30 289-318 250-283 (283)
384 PTZ00267 NIMA-related protein 33.4 17 0.00036 39.8 0.6 63 258-320 258-328 (478)
385 PHA03210 serine/threonine kina 33.2 23 0.0005 39.0 1.7 33 290-322 425-461 (501)
386 cd05613 STKc_MSK1_N N-terminal 32.4 25 0.00054 34.9 1.7 64 258-321 195-274 (290)
387 PF06200 tify: tify domain; I 32.0 1.1E+02 0.0024 21.1 4.2 28 57-84 6-34 (36)
388 KOG1290|consensus 31.6 41 0.00089 36.9 3.1 15 306-320 541-555 (590)
389 cd07313 terB_like_2 tellurium 31.0 1.3E+02 0.0029 25.1 5.7 79 377-457 13-97 (104)
390 cd07880 STKc_p38gamma_MAPK12 C 30.7 27 0.00058 36.0 1.6 32 289-320 268-303 (343)
391 KOG4347|consensus 30.5 44 0.00096 37.6 3.2 73 380-454 535-612 (671)
392 KOG0201|consensus 28.9 58 0.0013 35.2 3.6 129 188-337 141-285 (467)
393 KOG0668|consensus 28.5 31 0.00068 34.2 1.5 30 291-320 294-327 (338)
394 PF14513 DAG_kinase_N: Diacylg 28.3 76 0.0016 28.8 3.8 37 409-445 46-82 (138)
395 KOG0662|consensus 28.2 29 0.00063 33.1 1.2 43 279-321 239-289 (292)
396 KOG0671|consensus 28.0 30 0.00064 36.7 1.3 26 295-320 382-411 (415)
397 COG2101 SPT15 TATA-box binding 26.9 2.7E+02 0.006 26.3 7.2 70 4-85 105-176 (185)
398 cd08221 STKc_Nek9 Catalytic do 26.4 26 0.00057 33.8 0.6 61 258-318 188-256 (256)
399 PLN02222 phosphoinositide phos 25.8 2.2E+02 0.0047 32.2 7.6 38 430-469 23-62 (581)
400 KOG3449|consensus 25.5 1.5E+02 0.0032 25.8 4.8 55 367-422 5-59 (112)
401 KOG0667|consensus 25.3 35 0.00075 38.3 1.3 25 296-320 479-507 (586)
402 cd07836 STKc_Pho85 Catalytic d 25.2 37 0.00081 33.3 1.4 29 290-318 252-284 (284)
403 PF03672 UPF0154: Uncharacteri 25.0 99 0.0021 24.2 3.4 31 377-407 29-59 (64)
404 PF00404 Dockerin_1: Dockerin 24.7 70 0.0015 19.3 2.0 16 442-457 1-16 (21)
405 KOG0597|consensus 24.6 31 0.00067 38.5 0.7 63 258-320 187-256 (808)
406 COG5069 SAC6 Ca2+-binding acti 24.5 76 0.0017 34.6 3.5 98 357-457 479-582 (612)
407 cd05583 STKc_MSK_N N-terminal 24.4 37 0.0008 33.6 1.2 64 258-321 195-272 (288)
408 PF08976 DUF1880: Domain of un 23.8 72 0.0016 28.0 2.7 27 508-534 8-35 (118)
409 KOG0670|consensus 23.7 97 0.0021 34.5 4.2 112 185-320 620-751 (752)
410 KOG0586|consensus 23.6 52 0.0011 36.8 2.2 63 258-320 242-311 (596)
411 KOG0998|consensus 23.5 34 0.00074 40.4 0.9 62 431-533 282-344 (847)
412 cd08530 STKc_CNK2-like Catalyt 23.4 41 0.00089 32.2 1.3 59 258-318 188-256 (256)
413 KOG0696|consensus 22.6 36 0.00079 36.5 0.8 64 257-320 536-611 (683)
414 PF08726 EFhand_Ca_insen: Ca2+ 22.4 74 0.0016 25.3 2.3 27 363-390 6-32 (69)
415 cd07840 STKc_CDK9_like Catalyt 21.5 47 0.001 32.5 1.3 27 292-318 257-287 (287)
416 KOG2871|consensus 20.8 1E+02 0.0022 32.6 3.4 60 362-421 308-372 (449)
417 KOG0665|consensus 20.5 46 0.00099 34.6 1.0 27 293-319 284-314 (369)
418 PF12174 RST: RCD1-SRO-TAF4 (R 20.4 64 0.0014 25.7 1.6 26 509-534 27-53 (70)
419 COG4302 EutC Ethanolamine ammo 20.2 68 0.0015 31.9 2.0 36 181-262 191-226 (294)
420 cd07830 STKc_MAK_like Catalyti 20.1 50 0.0011 32.4 1.2 28 291-318 252-283 (283)
421 PRK00523 hypothetical protein; 20.1 1.4E+02 0.0029 24.0 3.3 31 377-407 37-67 (72)
No 1
>COG1723 Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=7.8e-47 Score=370.60 Aligned_cols=228 Identities=30% Similarity=0.535 Sum_probs=199.4
Q ss_pred eEEEEEEeccccChhhHHhhhhcCCccceecccccccCCCCceEEEeeeccCCCCceEEEEcCCcEEEecCCHHHHHHHH
Q psy15785 2 WNVVAFSTAQEYDIDNLKKGIVGKDLYELIEFDDNMQNGENSIQVIAKYQVGKEPRFIYFFQEGSLVAWNVSDLEIENLL 81 (542)
Q Consensus 2 ~~v~a~~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~F~~G~vV~w~~~~~~~~~~l 81 (542)
-+|+|||||++|+++.|.+.++..|+|....++ +++...+.-..+.+.+++|+|.||||||||+++.|+..+|
T Consensus 58 ~R~taYct~~~y~l~~L~~~LK~~~l~p~~y~e-------~v~~~~~e~~~~~~~~~~f~f~yGvVV~Wg~se~eE~~iL 130 (331)
T COG1723 58 MRCTAYCTASGYRLKVLFKLLKKNGLYPSVYNE-------DVLSLMPEMNTDEEFGEAFFFPYGVVVFWGFSESEEKNIL 130 (331)
T ss_pred ceeeeEeccccccHHHHHHHhhhccCChhHHHH-------HHHhcchhhcCCcccceEEEecCceEEEeCCcHHHHhhHH
Confidence 379999999999999999999988865512111 2222211111345678999999999999999999999999
Q ss_pred HHHHHhhhCCCccccccCcceEEEEEEeCCccccceeCCeEEEccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy15785 82 EFLKQFEIKPYEKAVVLNEKELMNYTYSPNIKVSQLKRDSICLVENSPDDMLSKYTISNAMALSVKLGIWEAALDKYVDS 161 (542)
Q Consensus 82 ~~l~~~~~~~~~~~~~~~e~e~~~~~~~~~~~~~~i~~d~i~l~~~~~~~~~~~~~~S~alaqSv~L~~~E~~~~~~~~~ 161 (542)
..+..++.+|+.++.+ |.++++|.+++. ++++|.||.|+|++. ++..|+||||||||||||++||+.++++|+.
T Consensus 131 ~~i~~~~~~~L~e~e~--E~e~fhy~~~~~-~~prI~nD~I~L~s~---~~~~klaiS~aLAQSVkLs~fE~~v~~ti~~ 204 (331)
T COG1723 131 RDITKAESNPLKEPEI--ETEEFHYNVTET-EKPRIFNDKIILRSS---NVFTKLAISHALAQSVKLSVFEESVDNTIDQ 204 (331)
T ss_pred HhhhhcccCCCCCccc--eEEEEEeeeecc-cCceeECCEEEEcCC---chhHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 9999999999999855 888999988774 789999999999874 5689999999999999999999999999999
Q ss_pred HHHHHHhhcCCchhhhhhhhcCCCcceeeeeccCceEeeccchHHHHHHHHHHhhhhccchhhHhhhhcccccccccCcc
Q psy15785 162 IEYITEVNGENSIQVIAKYQVGKEPRFIYFFQEGSLVAWNVSDLEIENLLEFLKQFEIKPYEKAVVLNEKELMNYTYSPN 241 (542)
Q Consensus 162 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~e~~~~~~~~~ 241 (542)
++++|+.|| ++|+| +.+
T Consensus 205 t~~~pq~la----------------------~~gkv-----------------------------------------sls 221 (331)
T COG1723 205 TKPIPQELA----------------------RTGKV-----------------------------------------SLS 221 (331)
T ss_pred cchhHHHHh----------------------hcCCc-----------------------------------------ccc
Confidence 999999997 67876 678
Q ss_pred hHHHHHHhhhHHHHHhhhhccccccCCCCCCcccccccccccccccccccchhhhhhh-hHhhhc
Q psy15785 242 IREVLQKTGQLFALRHSINLDSDLLDTPDFYWERDDLENLYLQTCNYFSISRRTKMIS-RIYICR 305 (542)
Q Consensus 242 ~~~~~~~~G~l~~~r~~v~l~~~Lld~P~f~w~~~~le~ly~~~~~~~eIs~r~k~L~-r~~l~~ 305 (542)
|++++|++|+||.+|++|||+++++|+|+|+|+.|+++++|..+++|++|.+|+..|| |..++.
T Consensus 222 r~eilk~iG~LFllR~~iNL~s~IlDtPef~W~ePqleplY~~~~~yLdI~~RvnvLN~Rl~vi~ 286 (331)
T COG1723 222 RKEILKQIGKLFLLRVSINLHSDILDTPEFFWSEPQLEPLYLAVREYLDINPRVNVLNRRLEVIS 286 (331)
T ss_pred HHHHHHHHhHHhheeeeeeeeeccccCchhcccCcchhHHHHHHHHHhchhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999 555555
No 2
>PF02582 DUF155: Uncharacterised ACR, YagE family COG1723; InterPro: IPR003734 This entry describes proteins of unknown function.
Probab=100.00 E-value=3.3e-39 Score=304.95 Aligned_cols=175 Identities=41% Similarity=0.720 Sum_probs=162.8
Q ss_pred eEEEEcCCcEEEecCCHHHHHHHHHHHHHhhhCCCccccccCcceEEEEEEeCCccccceeCCeEEEccCCcchhHHHHH
Q psy15785 58 FIYFFQEGSLVAWNVSDLEIENLLEFLKQFEIKPYEKAVVLNEKELMNYTYSPNIKVSQLKRDSICLVENSPDDMLSKYT 137 (542)
Q Consensus 58 ~~f~F~~G~vV~w~~~~~~~~~~l~~l~~~~~~~~~~~~~~~e~e~~~~~~~~~~~~~~i~~d~i~l~~~~~~~~~~~~~ 137 (542)
+||+|+||||||||+++.++..+|+.|++++.+|++++.+ +.|++.|.++++.+.+++.+|.|+|+..+ .+.++|
T Consensus 1 dvf~F~~G~vVfw~~~~~~~~~~l~~l~~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~i~~d~i~l~~~~---~~~~~a 75 (175)
T PF02582_consen 1 DVFLFRYGVVVFWGVSEEEEKQFLDYLKPFEEEPLSEPEV--ETEEMNYIYDPNLPKSRIQNDIIVLPELD---VLEKLA 75 (175)
T ss_pred CEEEecCcEEEEEeCCHHHHHHHHHHHHHHHhCCCccccc--eeEEEEEEEeCCCCCceEECCEEEEcccc---hHHHHH
Confidence 5899999999999999999999999999999999999865 59999999999865789999999998764 469999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhcCCchhhhhhhhcCCCcceeeeeccCceEeeccchHHHHHHHHHHhhh
Q psy15785 138 ISNAMALSVKLGIWEAALDKYVDSIEYITEVNGENSIQVIAKYQVGKEPRFIYFFQEGSLVAWNVSDLEIENLLEFLKQF 217 (542)
Q Consensus 138 ~S~alaqSv~L~~~E~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~~~~~ 217 (542)
+|+||||||||++||..+++++++++++|..|+ +.|++
T Consensus 76 iS~~LAqSv~L~~~E~~v~~~l~~~~~i~~~L~----------------------~~G~~-------------------- 113 (175)
T PF02582_consen 76 ISHALAQSVKLDFFEEQVDKLLEETEPIPEELA----------------------KTGKL-------------------- 113 (175)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------hcCCC--------------------
Confidence 999999999999999999999999999999997 34553
Q ss_pred hccchhhHhhhhcccccccccCcchHHHHHHhhhHHHHHhhhhccccccCCCCCCcccccccccccccccccccchhhhh
Q psy15785 218 EIKPYEKAVVLNEKELMNYTYSPNIREVLQKTGQLFALRHSINLDSDLLDTPDFYWERDDLENLYLQTCNYFSISRRTKM 297 (542)
Q Consensus 218 ~~~~~~~~~~~~e~e~~~~~~~~~~~~~~~~~G~l~~~r~~v~l~~~Lld~P~f~w~~~~le~ly~~~~~~~eIs~r~k~ 297 (542)
..+|++++|++|+++.+|++||++++++|+|+|+|++|+++++|..++++++|++|++.
T Consensus 114 ---------------------~~~~k~l~k~~G~l~~~r~~i~l~~~ilD~Pe~~We~~~le~ly~~l~~~lei~~R~~~ 172 (175)
T PF02582_consen 114 ---------------------PLSRKELLKLIGELFSLRHDINLNSDILDTPEFFWENPELEPLYERLRRYLEIKERIRI 172 (175)
T ss_pred ---------------------CcCHHHHHHHHHHHHHHHHHHHHhhhcccCchhccCChhHHHHHHHHHHHcCHHHHHHH
Confidence 34789999999999999999999999999999999999999999999999999999999
Q ss_pred hhh
Q psy15785 298 ISR 300 (542)
Q Consensus 298 L~r 300 (542)
|++
T Consensus 173 Ln~ 175 (175)
T PF02582_consen 173 LNE 175 (175)
T ss_pred hcC
Confidence 874
No 3
>KOG2861|consensus
Probab=100.00 E-value=3.8e-39 Score=330.66 Aligned_cols=237 Identities=33% Similarity=0.498 Sum_probs=185.4
Q ss_pred EEEEEEeccccChhhHHhhhhcC-------------Cccceeccc-cccc--CCCCceE---EEeeecc-CCCCceEEEE
Q psy15785 3 NVVAFSTAQEYDIDNLKKGIVGK-------------DLYELIEFD-DNMQ--NGENSIQ---VIAKYQV-GKEPRFIYFF 62 (542)
Q Consensus 3 ~v~a~~~a~~~~l~~l~~~~~~~-------------~~~~~~~~~-~~~~--~~~~~~~---~~~~~~~-~~~~~~~f~F 62 (542)
+.+|||+++.+.+..+.+.++.. ..|.+..|- +.+. .+..... ....... +.+.+++|||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~s~~~~eifvF 173 (399)
T KOG2861|consen 94 RETAYCTEETLGLKELRKYFKSTSLLTKLGLAEFNECLYEPTSFNTNYVGLDFSDKSDSSIKPLNGSINGSGEFSEIFVF 173 (399)
T ss_pred chhccchhhhcCcchHHHHHHHhhhhhhcchhhhhhcccCccccccccccccccCccccccccccccccCCCCcceEEEE
Confidence 57899999999999999887432 223333322 0100 0000011 0111111 3467899999
Q ss_pred cCCcEEEecCCHHHHHHHHHHHHHhhhCCCccccccC--cceEEEEEEeCCccccceeCCeEEEccCCcchhHHHHHHHH
Q psy15785 63 QEGSLVAWNVSDLEIENLLEFLKQFEIKPYEKAVVLN--EKELMNYTYSPNIKVSQLKRDSICLVENSPDDMLSKYTISN 140 (542)
Q Consensus 63 ~~G~vV~w~~~~~~~~~~l~~l~~~~~~~~~~~~~~~--e~e~~~~~~~~~~~~~~i~~d~i~l~~~~~~~~~~~~~~S~ 140 (542)
+||||||||+++.|+..+|..|+.|+.+|+..++..+ |.++++|.++.+...+ ..+|.|++... ++++.|+||||
T Consensus 174 ~yGvvVfwn~s~~q~~~iL~~le~~e~~~~~~~l~~~e~ev~~~~~~~t~~~~~~-~~~~~i~l~~~--~~~l~k~aiS~ 250 (399)
T KOG2861|consen 174 RYGVVVFWNVSENQEKHILKELERHEYGPLEIALDEEESEVEEFTYLITGSTFRR-GINDDIVLDDS--DNILIKLAISH 250 (399)
T ss_pred ecceEEEEecChhHHHhHHHHHHHhccccchhhhchhhhhhhccccccccccccc-cccceeEEecc--cchhHHHHHHH
Confidence 9999999999999999999999999999877776644 4455555555543233 34466666543 47899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHhhcCCchhhhhhhhcCCCcceeeeeccCceEeeccchHHHHHHHHHHhhhhcc
Q psy15785 141 AMALSVKLGIWEAALDKYVDSIEYITEVNGENSIQVIAKYQVGKEPRFIYFFQEGSLVAWNVSDLEIENLLEFLKQFEIK 220 (542)
Q Consensus 141 alaqSv~L~~~E~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~ 220 (542)
||||||||++||+++++++++++.+|+.|+ +.|+|
T Consensus 251 alaQSvKL~~~E~~vd~~I~s~~~ipe~la----------------------~~gkl----------------------- 285 (399)
T KOG2861|consen 251 ALAQSVKLSYFESLVDKTIESTTDIPESLA----------------------LGGKL----------------------- 285 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHH----------------------hcCee-----------------------
Confidence 999999999999999999999999999997 56665
Q ss_pred chhhHhhhhcccccccccCcchHHHHHHhhhHHHHHhhhhccccccCCCCCCcccccccccccccccccccchhhhhhh-
Q psy15785 221 PYEKAVVLNEKELMNYTYSPNIREVLQKTGQLFALRHSINLDSDLLDTPDFYWERDDLENLYLQTCNYFSISRRTKMIS- 299 (542)
Q Consensus 221 ~~~~~~~~~e~e~~~~~~~~~~~~~~~~~G~l~~~r~~v~l~~~Lld~P~f~w~~~~le~ly~~~~~~~eIs~r~k~L~- 299 (542)
..+|++++|++|++|.+|++|||++.|+|+|||+|+.|+++++|..+++|++|++|++.||
T Consensus 286 ------------------~lsr~e~lk~iGkLf~LR~~INL~s~lLdtPdf~W~ep~Le~iY~~~r~yleI~qRv~vLN~ 347 (399)
T KOG2861|consen 286 ------------------TLSREELLKKIGKLFALRHDINLSSGLLDTPDFYWDEPQLEPIYEATRRYLEIGQRVNVLNY 347 (399)
T ss_pred ------------------cccHHHHHHHHHHHHHHheeeecccccccCcccccCchhHHHHHHHHHHHcccchHHHHHHH
Confidence 5689999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhhhc
Q psy15785 300 RIYICR 305 (542)
Q Consensus 300 r~~l~~ 305 (542)
|..++.
T Consensus 348 kl~~i~ 353 (399)
T KOG2861|consen 348 KLKVIE 353 (399)
T ss_pred HHHHHH
Confidence 666665
No 4
>KOG0031|consensus
Probab=99.92 E-value=4.5e-24 Score=189.35 Aligned_cols=159 Identities=72% Similarity=1.156 Sum_probs=153.3
Q ss_pred hhHHHHHHhhHHhhCCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhcCCCCcchhhhHHHHh
Q psy15785 343 KKRAQRATSNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGPINFTMFLTLFG 422 (542)
Q Consensus 343 ~~~~~~~~~~~~~~ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~~dG~Idf~EFl~~~~ 422 (542)
.++++++.+++++++++.||++++++|..+|.|+||.|+.++|+.++.++|..+++++++.++..++|.|+|.-|+.++.
T Consensus 12 ~~ra~rasSnvFamf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea~gPINft~FLTmfG 91 (171)
T KOG0031|consen 12 AKRAKRASSNVFAMFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEAPGPINFTVFLTMFG 91 (171)
T ss_pred HhhhccccchHHHHhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhCCCCeeHHHHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCcHHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHH
Q psy15785 423 DRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMII 502 (542)
Q Consensus 423 ~~~~~~~~~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~ 502 (542)
.++...++++.+..||++||.+++|.|..+.|+.+|...|.++++++
T Consensus 92 ekL~gtdpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eE--------------------------------- 138 (171)
T KOG0031|consen 92 EKLNGTDPEEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEE--------------------------------- 138 (171)
T ss_pred HHhcCCCHHHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHH---------------------------------
Confidence 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCC-CCCceeHHHHHHHHhcCCCCCC
Q psy15785 503 VLIMIEVDEMYREAPI-KNGMFDYIEFTRILKHGAKDKD 540 (542)
Q Consensus 503 ~~~~~~i~~l~~~~D~-~dG~Is~~EF~~~l~~~~~~~~ 540 (542)
++.+|+.+.. ..|.|+|..|+.+|+++..+++
T Consensus 139 ------V~~m~r~~p~d~~G~~dy~~~~~~ithG~~~~~ 171 (171)
T KOG0031|consen 139 ------VDEMYREAPIDKKGNFDYKAFTYIITHGEKDEE 171 (171)
T ss_pred ------HHHHHHhCCcccCCceeHHHHHHHHHccccccC
Confidence 9999999999 9999999999999998876653
No 5
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.90 E-value=4e-23 Score=188.97 Aligned_cols=148 Identities=34% Similarity=0.658 Sum_probs=139.7
Q ss_pred hhHHhhCCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhcCC---CCcchhhhHHHHhhhcCC
Q psy15785 351 SNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAP---GPINFTMFLTLFGDRLQG 427 (542)
Q Consensus 351 ~~~~~~ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~~d---G~Idf~EFl~~~~~~~~~ 427 (542)
+...++++++++++++++|..+|+|++|.|+..+|..+|+.+|.+++..++..++...+ +.|+|.+|+.++......
T Consensus 8 ~~~~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~~~~~idf~~Fl~~ms~~~~~ 87 (160)
T COG5126 8 LLTFTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDAGNETVDFPEFLTVMSVKLKR 87 (160)
T ss_pred hhhcccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccCCCCccCHHHHHHHHHHHhcc
Confidence 33456899999999999999999999999999999999999999999999999999844 999999999999988877
Q ss_pred CCcHHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHH
Q psy15785 428 TDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMI 507 (542)
Q Consensus 428 ~~~~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~ 507 (542)
....++++.||+.||+|++|+|+..+|+.+++.+|..+++++
T Consensus 88 ~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~dee-------------------------------------- 129 (160)
T COG5126 88 GDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEE-------------------------------------- 129 (160)
T ss_pred CCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHH--------------------------------------
Confidence 888999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCC-CCCceeHHHHHHHHhcCCC
Q psy15785 508 EVDEMYREAPI-KNGMFDYIEFTRILKHGAK 537 (542)
Q Consensus 508 ~i~~l~~~~D~-~dG~Is~~EF~~~l~~~~~ 537 (542)
++.+++.+|. ++|.|+|++|++++...+.
T Consensus 130 -v~~ll~~~d~d~dG~i~~~eF~~~~~~~~~ 159 (160)
T COG5126 130 -VEKLLKEYDEDGDGEIDYEEFKKLIKDSPT 159 (160)
T ss_pred -HHHHHHhcCCCCCceEeHHHHHHHHhccCC
Confidence 9999999999 9999999999999987653
No 6
>KOG0027|consensus
Probab=99.86 E-value=6.1e-21 Score=176.17 Aligned_cols=140 Identities=36% Similarity=0.662 Sum_probs=129.7
Q ss_pred CCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhc----CCCCcchhhhHHHHhhhcCCCCc--
Q psy15785 357 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTMFLTLFGDRLQGTDP-- 430 (542)
Q Consensus 357 ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~----~dG~Idf~EFl~~~~~~~~~~~~-- 430 (542)
++..++.+++++|+.+|++++|+|+..||..+++.+|..|+..++..++.. ++|.|+|.+|+.++.........
T Consensus 2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~ 81 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE 81 (151)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc
Confidence 577889999999999999999999999999999999999999999999997 68999999999999875544332
Q ss_pred --HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHH
Q psy15785 431 --EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIE 508 (542)
Q Consensus 431 --~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~ 508 (542)
.+.++.||+.||+|++|+||.+||+.+|..+|.++++++
T Consensus 82 ~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e--------------------------------------- 122 (151)
T KOG0027|consen 82 ASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEE--------------------------------------- 122 (151)
T ss_pred ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHH---------------------------------------
Confidence 459999999999999999999999999999999999999
Q ss_pred HHHHHHhCCC-CCCceeHHHHHHHHhcC
Q psy15785 509 VDEMYREAPI-KNGMFDYIEFTRILKHG 535 (542)
Q Consensus 509 i~~l~~~~D~-~dG~Is~~EF~~~l~~~ 535 (542)
++.+++.+|. +||.|+|++|+.+|...
T Consensus 123 ~~~mi~~~d~d~dg~i~f~ef~~~m~~~ 150 (151)
T KOG0027|consen 123 CKEMIREVDVDGDGKVNFEEFVKMMSGK 150 (151)
T ss_pred HHHHHHhcCCCCCCeEeHHHHHHHHhcC
Confidence 9999999999 99999999999999864
No 7
>KOG0028|consensus
Probab=99.79 E-value=1.8e-18 Score=154.99 Aligned_cols=141 Identities=32% Similarity=0.541 Sum_probs=134.7
Q ss_pred hCCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhc----CCCCcchhhhHHHHhhhcCCCCcH
Q psy15785 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTMFLTLFGDRLQGTDPE 431 (542)
Q Consensus 356 ~ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~----~dG~Idf~EFl~~~~~~~~~~~~~ 431 (542)
.+++++.++++..|..||.+++|+|+.+||+.+++++|+.+...++..++.. +.|.|+|++|+..+.......++.
T Consensus 26 ~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~ 105 (172)
T KOG0028|consen 26 ELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTK 105 (172)
T ss_pred cccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcH
Confidence 5888999999999999999999999999999999999999999999999987 679999999999988888778899
Q ss_pred HHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHHH
Q psy15785 432 DVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDE 511 (542)
Q Consensus 432 ~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~~ 511 (542)
++++.+|+.+|.|++|.||..+|+.+...+|..+++++ +.+
T Consensus 106 eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~E---------------------------------------l~e 146 (172)
T KOG0028|consen 106 EEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEE---------------------------------------LME 146 (172)
T ss_pred HHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHH---------------------------------------HHH
Confidence 99999999999999999999999999999999999999 999
Q ss_pred HHHhCCC-CCCceeHHHHHHHHhcC
Q psy15785 512 MYREAPI-KNGMFDYIEFTRILKHG 535 (542)
Q Consensus 512 l~~~~D~-~dG~Is~~EF~~~l~~~ 535 (542)
|+.++|. ++|.|+-+||..+|++.
T Consensus 147 MIeEAd~d~dgevneeEF~~imk~t 171 (172)
T KOG0028|consen 147 MIEEADRDGDGEVNEEEFIRIMKKT 171 (172)
T ss_pred HHHHhcccccccccHHHHHHHHhcC
Confidence 9999999 99999999999999864
No 8
>KOG0037|consensus
Probab=99.76 E-value=1.6e-17 Score=156.64 Aligned_cols=154 Identities=23% Similarity=0.374 Sum_probs=136.8
Q ss_pred HHHHHHHHhccccCCCCcceeHHHHHHHHHHcC-CCCCHHHHHHHHhc----CCCCcchhhhHHHHhhhcCCCCcHHHHH
Q psy15785 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLG-KNPTDDYLEGMMGE----APGPINFTMFLTLFGDRLQGTDPEDVIK 435 (542)
Q Consensus 361 ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg-~~~s~~ei~~l~~~----~dG~Idf~EFl~~~~~~~~~~~~~~~l~ 435 (542)
.-..+...|...|+|++|.|+.+||..+|...+ ...+.+.|..|+.- .+|+|+|.||.+++.. ...++
T Consensus 55 ~~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~-------i~~Wr 127 (221)
T KOG0037|consen 55 TFPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKY-------INQWR 127 (221)
T ss_pred ccHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH-------HHHHH
Confidence 345678999999999999999999999998665 45667777766653 7899999999999986 67899
Q ss_pred HHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccc-c-ccchhHHHHHHHHHHHH-HHHH
Q psy15785 436 NAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLS-D-KHHIRLEWMIIVLIMIE-VDEM 512 (542)
Q Consensus 436 ~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Fv~~~~~~~-i~~l 512 (542)
.+|+.||+|++|.|+..||+++|..+|..++++. .+.++.+|+ . ++.|.|++|++||+.++ +.+.
T Consensus 128 ~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~------------~~~lv~kyd~~~~g~i~FD~FI~ccv~L~~lt~~ 195 (221)
T KOG0037|consen 128 NVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQF------------YNLLVRKYDRFGGGRIDFDDFIQCCVVLQRLTEA 195 (221)
T ss_pred HHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHH------------HHHHHHHhccccCCceeHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988 788888887 4 78999999999999999 8999
Q ss_pred HHhCCC-CCCc--eeHHHHHHHHh
Q psy15785 513 YREAPI-KNGM--FDYIEFTRILK 533 (542)
Q Consensus 513 ~~~~D~-~dG~--Is~~EF~~~l~ 533 (542)
|+..|. .+|. |+|++|+.+..
T Consensus 196 Fr~~D~~q~G~i~~~y~dfl~~t~ 219 (221)
T KOG0037|consen 196 FRRRDTAQQGSITISYDDFLQMTM 219 (221)
T ss_pred HHHhccccceeEEEeHHHHHHHhh
Confidence 999999 7776 69999998754
No 9
>PTZ00183 centrin; Provisional
Probab=99.75 E-value=3.6e-17 Score=150.89 Aligned_cols=142 Identities=32% Similarity=0.575 Sum_probs=130.0
Q ss_pred hCCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhc----CCCCcchhhhHHHHhhhcCCCCcH
Q psy15785 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTMFLTLFGDRLQGTDPE 431 (542)
Q Consensus 356 ~ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~----~dG~Idf~EFl~~~~~~~~~~~~~ 431 (542)
.+++.+++++..+|..+|.+++|.|+..||..+++.+|..++...+..++.. ++|.|+|.||+.++..........
T Consensus 10 ~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 89 (158)
T PTZ00183 10 GLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPR 89 (158)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcH
Confidence 5889999999999999999999999999999999999988888888888874 789999999999887654445557
Q ss_pred HHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHHH
Q psy15785 432 DVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDE 511 (542)
Q Consensus 432 ~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~~ 511 (542)
+.++.+|+.+|.+++|.|+.+||..++...|..+++.+ +..
T Consensus 90 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~---------------------------------------~~~ 130 (158)
T PTZ00183 90 EEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEE---------------------------------------LQE 130 (158)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHH---------------------------------------HHH
Confidence 88999999999999999999999999999999999999 999
Q ss_pred HHHhCCC-CCCceeHHHHHHHHhcCC
Q psy15785 512 MYREAPI-KNGMFDYIEFTRILKHGA 536 (542)
Q Consensus 512 l~~~~D~-~dG~Is~~EF~~~l~~~~ 536 (542)
+|..+|. ++|.|+|++|..++.+.|
T Consensus 131 ~~~~~d~~~~g~i~~~ef~~~~~~~~ 156 (158)
T PTZ00183 131 MIDEADRNGDGEISEEEFYRIMKKTN 156 (158)
T ss_pred HHHHhCCCCCCcCcHHHHHHHHhccc
Confidence 9999999 999999999999998765
No 10
>PTZ00184 calmodulin; Provisional
Probab=99.73 E-value=8.1e-17 Score=146.63 Aligned_cols=141 Identities=41% Similarity=0.767 Sum_probs=127.6
Q ss_pred hhCCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhc----CCCCcchhhhHHHHhhhcCCCCc
Q psy15785 355 AMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTMFLTLFGDRLQGTDP 430 (542)
Q Consensus 355 ~~ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~----~dG~Idf~EFl~~~~~~~~~~~~ 430 (542)
.++++++++.++..|..+|.+++|.|+..||..++..+|..++..++..++.. ++|.|+|++|+.++.........
T Consensus 3 ~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~ 82 (149)
T PTZ00184 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDS 82 (149)
T ss_pred CccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcH
Confidence 35789999999999999999999999999999999999998998889888875 68999999999998765444445
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHH
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVD 510 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~ 510 (542)
...+..+|+.+|.+++|.|+.+++..++..+|..++.++ +.
T Consensus 83 ~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~---------------------------------------~~ 123 (149)
T PTZ00184 83 EEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEE---------------------------------------VD 123 (149)
T ss_pred HHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHH---------------------------------------HH
Confidence 678999999999999999999999999999998899888 89
Q ss_pred HHHHhCCC-CCCceeHHHHHHHHhc
Q psy15785 511 EMYREAPI-KNGMFDYIEFTRILKH 534 (542)
Q Consensus 511 ~l~~~~D~-~dG~Is~~EF~~~l~~ 534 (542)
.+++.+|. ++|.|+|+||+.++..
T Consensus 124 ~~~~~~d~~~~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 124 EMIREADVDGDGQINYEEFVKMMMS 148 (149)
T ss_pred HHHHhcCCCCCCcCcHHHHHHHHhc
Confidence 99999999 9999999999998864
No 11
>KOG0030|consensus
Probab=99.73 E-value=3.9e-17 Score=143.11 Aligned_cols=140 Identities=28% Similarity=0.549 Sum_probs=125.7
Q ss_pred hCCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhc--CC----CCcchhhhHHHHhhhcC--C
Q psy15785 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE--AP----GPINFTMFLTLFGDRLQ--G 427 (542)
Q Consensus 356 ~ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~--~d----G~Idf~EFl~~~~~~~~--~ 427 (542)
..++++..+++++|..||..+||+|+..++..+|+.+|.+|++.++.+.+.+ .+ ..|+|++|+.++....+ .
T Consensus 4 ~~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~ 83 (152)
T KOG0030|consen 4 AFTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKD 83 (152)
T ss_pred ccCcchHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhccc
Confidence 4677888999999999999999999999999999999999999999999987 23 68999999999876433 3
Q ss_pred CCcHHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHH
Q psy15785 428 TDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMI 507 (542)
Q Consensus 428 ~~~~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~ 507 (542)
....+.+.+.++.||++++|.|...||+++|..+|.+++++|
T Consensus 84 q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeE-------------------------------------- 125 (152)
T KOG0030|consen 84 QGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEE-------------------------------------- 125 (152)
T ss_pred cCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHH--------------------------------------
Confidence 455788999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCceeHHHHHHHHhc
Q psy15785 508 EVDEMYREAPIKNGMFDYIEFTRILKH 534 (542)
Q Consensus 508 ~i~~l~~~~D~~dG~Is~~EF~~~l~~ 534 (542)
++.+++....++|.|+|+.|++.+..
T Consensus 126 -Ve~Llag~eD~nG~i~YE~fVk~i~~ 151 (152)
T KOG0030|consen 126 -VEELLAGQEDSNGCINYEAFVKHIMS 151 (152)
T ss_pred -HHHHHccccccCCcCcHHHHHHHHhc
Confidence 88988877668899999999998764
No 12
>KOG0034|consensus
Probab=99.61 E-value=1.1e-14 Score=137.83 Aligned_cols=147 Identities=27% Similarity=0.519 Sum_probs=123.9
Q ss_pred hhCCHHHHHHHHHHhccccCC-CCcceeHHHHHHHHHHcCCCCCHHHHHHHHhc-CCCC-cchhhhHHHHhhhcCCCCcH
Q psy15785 355 AMFDQAQIQNFKEAFNMIDQN-RDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE-APGP-INFTMFLTLFGDRLQGTDPE 431 (542)
Q Consensus 355 ~~ls~~ei~~l~~~F~~~D~d-~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~-~dG~-Idf~EFl~~~~~~~~~~~~~ 431 (542)
+.++..++..+...|.++|.+ ++|.|+.+||..+. .+..+|-...|-..+.. ++|. |+|++|+..+..........
T Consensus 25 ~~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~-~~~~Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~ 103 (187)
T KOG0034|consen 25 TQFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIP-ELALNPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKR 103 (187)
T ss_pred cccCHHHHHHHHHHHHHhccccccCccCHHHHHHHH-HHhcCcHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHH
Confidence 458899999999999999999 99999999999998 55667777777666665 6666 99999999999877766667
Q ss_pred HHHHHHHhhhCCCCCCcccHHHHHHHHHHc-CCCCC--HHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHH
Q psy15785 432 DVIKNAFGCFDEDNSGIINEERLRELLTSM-GDRFT--DEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIE 508 (542)
Q Consensus 432 ~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~-g~~ls--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~ 508 (542)
++++-||+.||.+++|+|+++|+.+++..+ |...+ ++. ++.+
T Consensus 104 ~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~-----~~~i------------------------------ 148 (187)
T KOG0034|consen 104 EKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQ-----LEDI------------------------------ 148 (187)
T ss_pred HHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHH-----HHHH------------------------------
Confidence 799999999999999999999999999886 43333 333 1111
Q ss_pred HHHHHHhCCC-CCCceeHHHHHHHHhcCCC
Q psy15785 509 VDEMYREAPI-KNGMFDYIEFTRILKHGAK 537 (542)
Q Consensus 509 i~~l~~~~D~-~dG~Is~~EF~~~l~~~~~ 537 (542)
++.+|.++|. +||.|+|+||++++.+.|.
T Consensus 149 ~d~t~~e~D~d~DG~IsfeEf~~~v~~~P~ 178 (187)
T KOG0034|consen 149 VDKTFEEADTDGDGKISFEEFCKVVEKQPD 178 (187)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHcCcc
Confidence 8999999999 9999999999999998764
No 13
>KOG0044|consensus
Probab=99.34 E-value=1.8e-11 Score=116.14 Aligned_cols=147 Identities=20% Similarity=0.341 Sum_probs=114.0
Q ss_pred HhhCCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhc-----CCCCcchhhhHHHHhhhcCCC
Q psy15785 354 FAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE-----APGPINFTMFLTLFGDRLQGT 428 (542)
Q Consensus 354 ~~~ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~-----~dG~Idf~EFl~~~~~~~~~~ 428 (542)
.+.+++.++..+.+-|..- -.+|.++.++++.++.......+.......+-+ ++|.|+|.||+.++....++
T Consensus 20 ~t~f~~~ei~~~Yr~Fk~~--cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rG- 96 (193)
T KOG0044|consen 20 QTKFSKKEIQQWYRGFKNE--CPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRG- 96 (193)
T ss_pred hcCCCHHHHHHHHHHhccc--CCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCC-
Confidence 3478888998888888763 368999999999999998866665555444332 79999999999999876554
Q ss_pred CcHHHHHHHHhhhCCCCCCcccHHHHHHHHHHc----CC-CCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHH
Q psy15785 429 DPEDVIKNAFGCFDEDNSGIINEERLRELLTSM----GD-RFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIV 503 (542)
Q Consensus 429 ~~~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~----g~-~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~ 503 (542)
...++++.+|++||.||+|+|+.+|+-.++..+ |. ..++.+ -
T Consensus 97 t~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~---------------------------------~ 143 (193)
T KOG0044|consen 97 TLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDE---------------------------------E 143 (193)
T ss_pred cHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCccc---------------------------------c
Confidence 448899999999999999999999999988774 32 111101 0
Q ss_pred HHHHHHHHHHHhCCC-CCCceeHHHHHHHHhcCC
Q psy15785 504 LIMIEVDEMYREAPI-KNGMFDYIEFTRILKHGA 536 (542)
Q Consensus 504 ~~~~~i~~l~~~~D~-~dG~Is~~EF~~~l~~~~ 536 (542)
.++..++.+|+.+|. +||.|+++||.......+
T Consensus 144 ~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d~ 177 (193)
T KOG0044|consen 144 TPEERVDKIFSKMDKNKDGKLTLEEFIEGCKADP 177 (193)
T ss_pred cHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhCH
Confidence 011128999999999 999999999999887654
No 14
>KOG0036|consensus
Probab=99.31 E-value=2.7e-11 Score=123.78 Aligned_cols=136 Identities=18% Similarity=0.319 Sum_probs=121.9
Q ss_pred hCCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCC-CCHHHHHHHHhc----CCCCcchhhhHHHHhhhcCCCCc
Q psy15785 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKN-PTDDYLEGMMGE----APGPINFTMFLTLFGDRLQGTDP 430 (542)
Q Consensus 356 ~ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~-~s~~ei~~l~~~----~dG~Idf~EFl~~~~~~~~~~~~ 430 (542)
..+++...+++.+|+.+|.+++|.++..++.+++.+++.+ +...-...++.. .+|.+||.||...+...
T Consensus 7 ~~~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~------ 80 (463)
T KOG0036|consen 7 ETDEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNK------ 80 (463)
T ss_pred CCcHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHh------
Confidence 4566777889999999999999999999999999999876 666666666665 68999999999998864
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHH
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVD 510 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~ 510 (542)
+.++.+.|+..|.++||.|+.+|+.+.|..+|.++++++ +.
T Consensus 81 E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~---------------------------------------~~ 121 (463)
T KOG0036|consen 81 ELELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEK---------------------------------------AA 121 (463)
T ss_pred HHHHHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHH---------------------------------------HH
Confidence 778999999999999999999999999999999999999 88
Q ss_pred HHHHhCCC-CCCceeHHHHHHHHhcCC
Q psy15785 511 EMYREAPI-KNGMFDYIEFTRILKHGA 536 (542)
Q Consensus 511 ~l~~~~D~-~dG~Is~~EF~~~l~~~~ 536 (542)
.++..+|+ +++.|+++||...+.-.|
T Consensus 122 k~~e~~d~~g~~~I~~~e~rd~~ll~p 148 (463)
T KOG0036|consen 122 KFFEHMDKDGKATIDLEEWRDHLLLYP 148 (463)
T ss_pred HHHHHhccCCCeeeccHHHHhhhhcCC
Confidence 89999999 999999999999887766
No 15
>PLN02964 phosphatidylserine decarboxylase
Probab=99.00 E-value=2.4e-09 Score=118.60 Aligned_cols=101 Identities=16% Similarity=0.293 Sum_probs=90.1
Q ss_pred hhCCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcC-CCCCHHH---HHHHHhc----CCCCcchhhhHHHHhhhcC
Q psy15785 355 AMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLG-KNPTDDY---LEGMMGE----APGPINFTMFLTLFGDRLQ 426 (542)
Q Consensus 355 ~~ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg-~~~s~~e---i~~l~~~----~dG~Idf~EFl~~~~~~~~ 426 (542)
+.++.+|+++++++|..+|+|++|.+ +..+++.+| ..+++.+ +..++.. ++|.|+|+||+.++... .
T Consensus 135 t~f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~l-g 209 (644)
T PLN02964 135 FDFVTQEPESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAF-G 209 (644)
T ss_pred hhccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHh-c
Confidence 57889999999999999999999997 889999999 5898887 6777764 78999999999999853 4
Q ss_pred CCCcHHHHHHHHhhhCCCCCCcccHHHHHHHHHH
Q psy15785 427 GTDPEDVIKNAFGCFDEDNSGIINEERLRELLTS 460 (542)
Q Consensus 427 ~~~~~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~ 460 (542)
...+.+++..+|+.||+|++|+|+.+||+.++..
T Consensus 210 ~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 210 NLVAANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred cCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 4566888999999999999999999999999988
No 16
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.98 E-value=1e-09 Score=91.88 Aligned_cols=65 Identities=15% Similarity=0.318 Sum_probs=60.7
Q ss_pred HHHHHHHHhhhCC-CCCCcccHHHHHHHHHH-cCCCCCH-HHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHH
Q psy15785 431 EDVIKNAFGCFDE-DNSGIINEERLRELLTS-MGDRFTD-EDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMI 507 (542)
Q Consensus 431 ~~~l~~aF~~~D~-d~~G~Is~eEL~~~L~~-~g~~ls~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~ 507 (542)
...++.+|+.||+ +++|+|+.+||+.++.+ +|..+++ ++
T Consensus 7 i~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~-------------------------------------- 48 (89)
T cd05022 7 IETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEG-------------------------------------- 48 (89)
T ss_pred HHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHH--------------------------------------
Confidence 4568999999999 99999999999999999 8988888 88
Q ss_pred HHHHHHHhCCC-CCCceeHHHHHHHHhc
Q psy15785 508 EVDEMYREAPI-KNGMFDYIEFTRILKH 534 (542)
Q Consensus 508 ~i~~l~~~~D~-~dG~Is~~EF~~~l~~ 534 (542)
++++++.+|. +||.|+|+||+.+|..
T Consensus 49 -v~~mi~~~D~d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 49 -LEEKMKNLDVNQDSKLSFEEFWELIGE 75 (89)
T ss_pred -HHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 9999999999 9999999999999875
No 17
>KOG0038|consensus
Probab=98.96 E-value=6.4e-09 Score=92.23 Aligned_cols=146 Identities=22% Similarity=0.358 Sum_probs=114.7
Q ss_pred hCCHHHHHHHHHHhccccCCC-----------CcceeHHHHHHHHHHcCCCCCHHHHHHHHhc-CCCCcchhhhHHHHhh
Q psy15785 356 MFDQAQIQNFKEAFNMIDQNR-----------DGFIDKEDLHDMLASLGKNPTDDYLEGMMGE-APGPINFTMFLTLFGD 423 (542)
Q Consensus 356 ~ls~~ei~~l~~~F~~~D~d~-----------dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~-~dG~Idf~EFl~~~~~ 423 (542)
-++.+++-++.+-|..+.++. .-+++.+. ..-|..+.-+|-...+.+.+.. |.|.++|++|+.++..
T Consensus 21 FFtrKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~-i~kMPELkenpfk~ri~e~FSeDG~GnlsfddFlDmfSV 99 (189)
T KOG0038|consen 21 FFTRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFEL-IEKMPELKENPFKRRICEVFSEDGRGNLSFDDFLDMFSV 99 (189)
T ss_pred cccHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHH-HhhChhhhcChHHHHHHHHhccCCCCcccHHHHHHHHHH
Confidence 577778888877777654321 12455544 4445667778888888888887 9999999999999887
Q ss_pred hcCCCCcHHHHHHHHhhhCCCCCCcccHHHHHHHHHHc-CCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHH
Q psy15785 424 RLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSM-GDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMII 502 (542)
Q Consensus 424 ~~~~~~~~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~-g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~ 502 (542)
........-++.-||+.||-|++++|..++|...+.++ ...+|++++
T Consensus 100 ~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv-------------------------------- 147 (189)
T KOG0038|consen 100 FSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEV-------------------------------- 147 (189)
T ss_pred HHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHH--------------------------------
Confidence 65545545678889999999999999999999999987 356888882
Q ss_pred HHHHHHHHHHHHhCCC-CCCceeHHHHHHHHhcCCC
Q psy15785 503 VLIMIEVDEMYREAPI-KNGMFDYIEFTRILKHGAK 537 (542)
Q Consensus 503 ~~~~~~i~~l~~~~D~-~dG~Is~~EF~~~l~~~~~ 537 (542)
.+-+++++.++|. |||++++.||..++.+.|+
T Consensus 148 ---~~i~ekvieEAD~DgDgkl~~~eFe~~i~raPD 180 (189)
T KOG0038|consen 148 ---ELICEKVIEEADLDGDGKLSFAEFEHVILRAPD 180 (189)
T ss_pred ---HHHHHHHHHHhcCCCCCcccHHHHHHHHHhCcc
Confidence 1118899999999 9999999999999998764
No 18
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.92 E-value=2.9e-09 Score=83.78 Aligned_cols=65 Identities=32% Similarity=0.584 Sum_probs=56.5
Q ss_pred HHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHHHH
Q psy15785 433 VIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEM 512 (542)
Q Consensus 433 ~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~~l 512 (542)
+++.+|+.+|+|++|+|+.+||+.++..++...++.+ . ...++.+
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~-----~------------------------------~~~~~~~ 45 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEE-----S------------------------------DEMIDQI 45 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHH-----H------------------------------HHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHH-----H------------------------------HHHHHHH
Confidence 4789999999999999999999999999998777666 1 1117788
Q ss_pred HHhCCC-CCCceeHHHHHHHH
Q psy15785 513 YREAPI-KNGMFDYIEFTRIL 532 (542)
Q Consensus 513 ~~~~D~-~dG~Is~~EF~~~l 532 (542)
|+.+|. ++|.|+|+||+.+|
T Consensus 46 ~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 46 FREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHTTTSSSSEEHHHHHHHH
T ss_pred HHHhCCCCcCCCcHHHHhccC
Confidence 999999 99999999999886
No 19
>KOG0027|consensus
Probab=98.82 E-value=2e-08 Score=92.69 Aligned_cols=94 Identities=26% Similarity=0.375 Sum_probs=81.6
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccc--cccchhHHHHHHHHHHH-
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLS--DKHHIRLEWMIIVLIMI- 507 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Fv~~~~~~- 507 (542)
...++.+|+.||+|++|+|+..||..+++.+|...++.+ +..+....+ ++|.+++++|..++...
T Consensus 7 ~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~e------------l~~~~~~~D~dg~g~I~~~eF~~l~~~~~ 74 (151)
T KOG0027|consen 7 ILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEE------------LRDLIKEIDLDGDGTIDFEEFLDLMEKLG 74 (151)
T ss_pred HHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHH------------HHHHHHHhCCCCCCeEcHHHHHHHHHhhh
Confidence 567999999999999999999999999999999999888 344444443 68999999999988755
Q ss_pred -----------HHHHHHHhCCC-CCCceeHHHHHHHHhcCC
Q psy15785 508 -----------EVDEMYREAPI-KNGMFDYIEFTRILKHGA 536 (542)
Q Consensus 508 -----------~i~~l~~~~D~-~dG~Is~~EF~~~l~~~~ 536 (542)
++.++|+.+|. ++|.|+..|+..+|++-.
T Consensus 75 ~~~~~~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg 115 (151)
T KOG0027|consen 75 EEKTDEEASSEELKEAFRVFDKDGDGFISASELKKVLTSLG 115 (151)
T ss_pred cccccccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhC
Confidence 47899999999 999999999999998754
No 20
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.80 E-value=2.8e-08 Score=91.53 Aligned_cols=95 Identities=24% Similarity=0.424 Sum_probs=80.6
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHH---
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMI--- 507 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~--- 507 (542)
.+.++++|..+|+|++|.|+..+|..+++.+|...+..+ +++++..++. +++.|+|++|+.++...
T Consensus 19 i~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~e-----i~~l~~~~d~------~~~~idf~~Fl~~ms~~~~~ 87 (160)
T COG5126 19 IQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAE-----INKLFEEIDA------GNETVDFPEFLTVMSVKLKR 87 (160)
T ss_pred HHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHH-----HHHHHHhccC------CCCccCHHHHHHHHHHHhcc
Confidence 468999999999999999999999999999999999888 3333332222 67899999999977665
Q ss_pred -----HHHHHHHhCCC-CCCceeHHHHHHHHhcCC
Q psy15785 508 -----EVDEMYREAPI-KNGMFDYIEFTRILKHGA 536 (542)
Q Consensus 508 -----~i~~l~~~~D~-~dG~Is~~EF~~~l~~~~ 536 (542)
++...|+.+|. ++|.|+..+...+++...
T Consensus 88 ~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lg 122 (160)
T COG5126 88 GDKEEELREAFKLFDKDHDGYISIGELRRVLKSLG 122 (160)
T ss_pred CCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhc
Confidence 39999999999 999999999999998543
No 21
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.80 E-value=1.5e-08 Score=84.81 Aligned_cols=65 Identities=17% Similarity=0.323 Sum_probs=59.9
Q ss_pred HHHHHHHHhhhC-CCCCC-cccHHHHHHHHHH-----cCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHH
Q psy15785 431 EDVIKNAFGCFD-EDNSG-IINEERLRELLTS-----MGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIV 503 (542)
Q Consensus 431 ~~~l~~aF~~~D-~d~~G-~Is~eEL~~~L~~-----~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~ 503 (542)
...++.+|+.|| +||+| .|+.+||+.+|+. +|...++++
T Consensus 7 ~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~---------------------------------- 52 (88)
T cd05027 7 MVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEV---------------------------------- 52 (88)
T ss_pred HHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHH----------------------------------
Confidence 456899999998 89999 5999999999999 888889999
Q ss_pred HHHHHHHHHHHhCCC-CCCceeHHHHHHHHhc
Q psy15785 504 LIMIEVDEMYREAPI-KNGMFDYIEFTRILKH 534 (542)
Q Consensus 504 ~~~~~i~~l~~~~D~-~dG~Is~~EF~~~l~~ 534 (542)
++.+++.+|. ++|.|+|+||+.++..
T Consensus 53 -----v~~~i~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 53 -----VDKVMETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred -----HHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 9999999999 9999999999999864
No 22
>KOG0037|consensus
Probab=98.76 E-value=2.6e-08 Score=94.74 Aligned_cols=89 Identities=22% Similarity=0.396 Sum_probs=79.5
Q ss_pred HHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhc----CCCCcchhhhHHHHhhhcCCCCcHHHHHH
Q psy15785 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTMFLTLFGDRLQGTDPEDVIKN 436 (542)
Q Consensus 361 ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~----~dG~Idf~EFl~~~~~~~~~~~~~~~l~~ 436 (542)
-++.++.+|..+|+|++|+|+..||+.+|..+|+.++.+-++.++++ ++|.|.|++|+.++.. ...+.+
T Consensus 122 ~i~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~-------L~~lt~ 194 (221)
T KOG0037|consen 122 YINQWRNVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVV-------LQRLTE 194 (221)
T ss_pred HHHHHHHHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHH-------HHHHHH
Confidence 46789999999999999999999999999999999999999888887 4899999999999987 567999
Q ss_pred HHhhhCCCCCCccc--HHHHHH
Q psy15785 437 AFGCFDEDNSGIIN--EERLRE 456 (542)
Q Consensus 437 aF~~~D~d~~G~Is--~eEL~~ 456 (542)
+|+.+|++..|.|+ .+++-.
T Consensus 195 ~Fr~~D~~q~G~i~~~y~dfl~ 216 (221)
T KOG0037|consen 195 AFRRRDTAQQGSITISYDDFLQ 216 (221)
T ss_pred HHHHhccccceeEEEeHHHHHH
Confidence 99999999999875 455543
No 23
>KOG0033|consensus
Probab=98.76 E-value=5.5e-09 Score=101.18 Aligned_cols=92 Identities=12% Similarity=0.123 Sum_probs=71.4
Q ss_pred hhhhccccccCCCCCCccccc-------ccccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhh----c
Q psy15785 257 HSINLDSDLLDTPDFYWERDD-------LENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCY----S 321 (542)
Q Consensus 257 ~~v~l~~~Lld~P~f~w~~~~-------le~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~----~ 321 (542)
..|+|+++|.|.|||++++.. .+.+.+....|..|++.+|+|+|+||.- |+|+.+||+|||++. +
T Consensus 198 cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~~~A 277 (355)
T KOG0033|consen 198 CGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRERVA 277 (355)
T ss_pred hhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchHHHH
Confidence 479999999999999996654 4778888899999999999999998876 999999999999986 2
Q ss_pred ccccchhHHHHhhhhcccccchhHHHHHHhh
Q psy15785 322 ILTIIDSKMSSRKTAGRRATTKKRAQRATSN 352 (542)
Q Consensus 322 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (542)
+.... +++...+++|. .+.+++.+++.
T Consensus 278 s~~H~-~dtvd~lrkfN---arRKLKgavLt 304 (355)
T KOG0033|consen 278 SAIHR-QDTVDCLKKFN---ARRKLKGAILT 304 (355)
T ss_pred HHhhh-HHHHHHHHHhh---HHHHHHHHHHH
Confidence 22222 34556777776 34455555443
No 24
>KOG0377|consensus
Probab=98.70 E-value=1.7e-07 Score=96.62 Aligned_cols=135 Identities=19% Similarity=0.345 Sum_probs=105.9
Q ss_pred HHHHHHHHhccccCCCCcceeHHHHHHHHHH-cCCCCCHHHHHHHHhc--CCCCcchhhhHHHHhhhcC----C------
Q psy15785 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLAS-LGKNPTDDYLEGMMGE--APGPINFTMFLTLFGDRLQ----G------ 427 (542)
Q Consensus 361 ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~-lg~~~s~~ei~~l~~~--~dG~Idf~EFl~~~~~~~~----~------ 427 (542)
....+...|+.+|.+++|+|+......++.. +|.+++..-+..-+.. .+|.+.|.+.+..+..-.. +
T Consensus 462 ~~sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~kla~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slvet 541 (631)
T KOG0377|consen 462 HRSDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRPKLANGSDDGKVEYKSTLDNLDTEVILEEAGSSLVET 541 (631)
T ss_pred hhhHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhhhccCCCcCcceehHhHHHHhhhhhHHHHHHhHHHHH
Confidence 3457889999999999999999999999987 4677776655544444 6789999887765532100 0
Q ss_pred -CCcHHHHHHHHhhhCCCCCCcccHHHHHHHHHHcC----CCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHH
Q psy15785 428 -TDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMG----DRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMII 502 (542)
Q Consensus 428 -~~~~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g----~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~ 502 (542)
......+..+|+..|.|++|.||.+||++++.-++ ..+++++
T Consensus 542 LYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~--------------------------------- 588 (631)
T KOG0377|consen 542 LYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDE--------------------------------- 588 (631)
T ss_pred HHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHH---------------------------------
Confidence 11134578899999999999999999999987754 4677888
Q ss_pred HHHHHHHHHHHHhCCC-CCCceeHHHHHHHHhc
Q psy15785 503 VLIMIEVDEMYREAPI-KNGMFDYIEFTRILKH 534 (542)
Q Consensus 503 ~~~~~~i~~l~~~~D~-~dG~Is~~EF~~~l~~ 534 (542)
+.++-+.+|. +||.|+++||++.++-
T Consensus 589 ------i~~la~~mD~NkDG~IDlNEfLeAFrl 615 (631)
T KOG0377|consen 589 ------ILELARSMDLNKDGKIDLNEFLEAFRL 615 (631)
T ss_pred ------HHHHHHhhccCCCCcccHHHHHHHHhh
Confidence 8888899999 9999999999998764
No 25
>KOG2861|consensus
Probab=98.69 E-value=1.2e-08 Score=106.25 Aligned_cols=59 Identities=32% Similarity=0.445 Sum_probs=54.9
Q ss_pred CCcceeeeeccCceEeeccchHHHHHHHHHHhhhhccchhhHhhhhcccccccccCcch
Q psy15785 184 KEPRFIYFFQEGSLVAWNVSDLEIENLLEFLKQFEIKPYEKAVVLNEKELMNYTYSPNI 242 (542)
Q Consensus 184 ~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~e~~~~~~~~~~ 242 (542)
.+++|||||++|+||||||++.+++++|++|++|+..||..++.++|.|...|.|....
T Consensus 165 ~~~~eifvF~yGvvVfwn~s~~q~~~iL~~le~~e~~~~~~~l~~~e~ev~~~~~~~t~ 223 (399)
T KOG2861|consen 165 GEFSEIFVFRYGVVVFWNVSENQEKHILKELERHEYGPLEIALDEEESEVEEFTYLITG 223 (399)
T ss_pred CCcceEEEEecceEEEEecChhHHHhHHHHHHHhccccchhhhchhhhhhhcccccccc
Confidence 48999999999999999999999999999999999999999999999999999885433
No 26
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.67 E-value=6.9e-08 Score=75.86 Aligned_cols=66 Identities=33% Similarity=0.638 Sum_probs=55.4
Q ss_pred HHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhcCCCCcchhhhHHHHhhhcCCCCcHHHHHHHHhhhCC
Q psy15785 364 NFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDE 443 (542)
Q Consensus 364 ~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~~dG~Idf~EFl~~~~~~~~~~~~~~~l~~aF~~~D~ 443 (542)
+++++|+.+|+|++|.|+.+||..++..++...+..++ .+.+..+|+.+|+
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~D~ 51 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEES-----------------------------DEMIDQIFREFDT 51 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHH-----------------------------HHHHHHHHHHHTT
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHH-----------------------------HHHHHHHHHHhCC
Confidence 47899999999999999999999999999876653332 3457778999999
Q ss_pred CCCCcccHHHHHHHH
Q psy15785 444 DNSGIINEERLRELL 458 (542)
Q Consensus 444 d~~G~Is~eEL~~~L 458 (542)
|++|.|+.+||..++
T Consensus 52 d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 52 DGDGRISFDEFLNFM 66 (66)
T ss_dssp TSSSSEEHHHHHHHH
T ss_pred CCcCCCcHHHHhccC
Confidence 999999999998764
No 27
>KOG2643|consensus
Probab=98.64 E-value=7.9e-08 Score=99.38 Aligned_cols=158 Identities=23% Similarity=0.394 Sum_probs=104.9
Q ss_pred HHHHHHhccccCCCCcceeHHHHHHHHHH------cCC----CCC-----HHHHHH-----HHh-cCCCCcchhhhHHHH
Q psy15785 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLAS------LGK----NPT-----DDYLEG-----MMG-EAPGPINFTMFLTLF 421 (542)
Q Consensus 363 ~~l~~~F~~~D~d~dG~Is~~EL~~~L~~------lg~----~~s-----~~ei~~-----l~~-~~dG~Idf~EFl~~~ 421 (542)
..++-+|..||.||||.|+.+||....+- +|. .++ ..++.. ++. ++++++++++|+.++
T Consensus 233 ~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~ 312 (489)
T KOG2643|consen 233 RNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQ 312 (489)
T ss_pred ccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCCCccccHHHHHHHH
Confidence 34677899999999999999999877632 221 000 112211 121 278999999999999
Q ss_pred hhhcCCCCcHHHHHHHHhhhCCCCCCcccHHHHHHHHHHcC-CCCCHHHHhhhhhhhhhhHhhhhhccccc-ccchhHHH
Q psy15785 422 GDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMG-DRFTDEDVMNEKLNHCLELVDLLSSHLSD-KHHIRLEW 499 (542)
Q Consensus 422 ~~~~~~~~~~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g-~~ls~~e~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 499 (542)
..+. .+-+..-|..+|+..+|.|+..+|..+|-... .+..... ..+.....++.. .+.|++++
T Consensus 313 e~Lq-----~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~n~~~k~----------~~lkrvk~kf~~~~~gISl~E 377 (489)
T KOG2643|consen 313 ENLQ-----EEILELEFERFDKGDSGAISEVDFAELLLAYAGVNSKKKH----------KYLKRVKEKFKDDGKGISLQE 377 (489)
T ss_pred HHHH-----HHHHHHHHHHhCcccccccCHHHHHHHHHHHcccchHhHH----------HHHHHHHHhccCCCCCcCHHH
Confidence 8764 67788889999999999999999999886542 1111111 112222223332 44555555
Q ss_pred HHH--------------------------------HHHHH------H--HHHHHHhCCC-CCCceeHHHHHHHHhcC
Q psy15785 500 MII--------------------------------VLIMI------E--VDEMYREAPI-KNGMFDYIEFTRILKHG 535 (542)
Q Consensus 500 Fv~--------------------------------~~~~~------~--i~~l~~~~D~-~dG~Is~~EF~~~l~~~ 535 (542)
|.. ++..- + ++-+|.-+|. +||.++++||+.+|++.
T Consensus 378 f~~Ff~Fl~~l~dfd~Al~fy~~Ag~~i~~~~f~raa~~vtGveLSdhVvdvvF~IFD~N~Dg~LS~~EFl~Vmk~R 454 (489)
T KOG2643|consen 378 FKAFFRFLNNLNDFDIALRFYHMAGASIDEKTFQRAAKVVTGVELSDHVVDVVFTIFDENNDGTLSHKEFLAVMKRR 454 (489)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCcccccceeeeEEEEEccCCCCcccHHHHHHHHHHH
Confidence 554 22111 1 5667778899 99999999999999864
No 28
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.63 E-value=7.6e-08 Score=81.55 Aligned_cols=65 Identities=14% Similarity=0.366 Sum_probs=57.9
Q ss_pred HHHHHHHHhhhCC-CC-CCcccHHHHHHHHHH-----cCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHH
Q psy15785 431 EDVIKNAFGCFDE-DN-SGIINEERLRELLTS-----MGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIV 503 (542)
Q Consensus 431 ~~~l~~aF~~~D~-d~-~G~Is~eEL~~~L~~-----~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~ 503 (542)
...++.+|+.||. || +|.|+.+||+.+|.. +|...++++
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~e---------------------------------- 52 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMA---------------------------------- 52 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHH----------------------------------
Confidence 5678999999997 97 799999999999986 466778888
Q ss_pred HHHHHHHHHHHhCCC-CCCceeHHHHHHHHhc
Q psy15785 504 LIMIEVDEMYREAPI-KNGMFDYIEFTRILKH 534 (542)
Q Consensus 504 ~~~~~i~~l~~~~D~-~dG~Is~~EF~~~l~~ 534 (542)
++.+++.+|. ++|.|+|++|+.++..
T Consensus 53 -----i~~~~~~~D~~~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 53 -----VDKIMKDLDQNRDGKVNFEEFVSLVAG 79 (94)
T ss_pred -----HHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 9999999999 9999999999998864
No 29
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.63 E-value=9e-08 Score=81.00 Aligned_cols=65 Identities=18% Similarity=0.338 Sum_probs=55.3
Q ss_pred HHHHHHHHhhhC-CCCCC-cccHHHHHHHHHH-c----CCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHH
Q psy15785 431 EDVIKNAFGCFD-EDNSG-IINEERLRELLTS-M----GDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIV 503 (542)
Q Consensus 431 ~~~l~~aF~~~D-~d~~G-~Is~eEL~~~L~~-~----g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~ 503 (542)
...+..+|+.|| +||+| +||.+||+.++.. + +...++.+
T Consensus 9 ~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~---------------------------------- 54 (93)
T cd05026 9 MDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPML---------------------------------- 54 (93)
T ss_pred HHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHH----------------------------------
Confidence 456888999999 88998 5999999999977 3 23346666
Q ss_pred HHHHHHHHHHHhCCC-CCCceeHHHHHHHHhc
Q psy15785 504 LIMIEVDEMYREAPI-KNGMFDYIEFTRILKH 534 (542)
Q Consensus 504 ~~~~~i~~l~~~~D~-~dG~Is~~EF~~~l~~ 534 (542)
++++++.+|. ++|.|+|+||+.+|..
T Consensus 55 -----v~~i~~elD~n~dG~Idf~EF~~l~~~ 81 (93)
T cd05026 55 -----VDKIMNDLDSNKDNEVDFNEFVVLVAA 81 (93)
T ss_pred -----HHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 9999999999 9999999999999864
No 30
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.63 E-value=9e-08 Score=80.10 Aligned_cols=65 Identities=14% Similarity=0.419 Sum_probs=58.7
Q ss_pred HHHHHHHHhhhCC-CC-CCcccHHHHHHHHH---HcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHH
Q psy15785 431 EDVIKNAFGCFDE-DN-SGIINEERLRELLT---SMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLI 505 (542)
Q Consensus 431 ~~~l~~aF~~~D~-d~-~G~Is~eEL~~~L~---~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~ 505 (542)
...+..+|..||. || +|+|+.+||+.++. .+|.++++++
T Consensus 9 ~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~e------------------------------------ 52 (88)
T cd05029 9 IGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAE------------------------------------ 52 (88)
T ss_pred HHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHH------------------------------------
Confidence 3467889999998 67 89999999999997 3799999999
Q ss_pred HHHHHHHHHhCCC-CCCceeHHHHHHHHhc
Q psy15785 506 MIEVDEMYREAPI-KNGMFDYIEFTRILKH 534 (542)
Q Consensus 506 ~~~i~~l~~~~D~-~dG~Is~~EF~~~l~~ 534 (542)
++++++.+|. ++|.|+|+||+.+|.+
T Consensus 53 ---v~~m~~~~D~d~dG~Idf~EFv~lm~~ 79 (88)
T cd05029 53 ---IAKLMEDLDRNKDQEVNFQEYVTFLGA 79 (88)
T ss_pred ---HHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 9999999999 9999999999999875
No 31
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.60 E-value=1.2e-07 Score=79.93 Aligned_cols=65 Identities=20% Similarity=0.442 Sum_probs=56.9
Q ss_pred HHHHHHHHhhhC-CCCCC-cccHHHHHHHHHH-cCC----CCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHH
Q psy15785 431 EDVIKNAFGCFD-EDNSG-IINEERLRELLTS-MGD----RFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIV 503 (542)
Q Consensus 431 ~~~l~~aF~~~D-~d~~G-~Is~eEL~~~L~~-~g~----~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~ 503 (542)
.+.++++|+.|| +|++| .|+.+||+.+|.. +|. ..++++
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~---------------------------------- 53 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADA---------------------------------- 53 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHH----------------------------------
Confidence 567999999997 99999 5999999999986 553 346777
Q ss_pred HHHHHHHHHHHhCCC-CCCceeHHHHHHHHhc
Q psy15785 504 LIMIEVDEMYREAPI-KNGMFDYIEFTRILKH 534 (542)
Q Consensus 504 ~~~~~i~~l~~~~D~-~dG~Is~~EF~~~l~~ 534 (542)
++.+++.+|. ++|.|+|++|+.++..
T Consensus 54 -----v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 54 -----VDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred -----HHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 9999999999 9999999999998874
No 32
>KOG4223|consensus
Probab=98.56 E-value=4.3e-07 Score=91.12 Aligned_cols=145 Identities=18% Similarity=0.256 Sum_probs=102.7
Q ss_pred hhCCH-HHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHH----HHHHHHhcCCCCcchhhhHHHHhhhcC---
Q psy15785 355 AMFDQ-AQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDD----YLEGMMGEAPGPINFTMFLTLFGDRLQ--- 426 (542)
Q Consensus 355 ~~ls~-~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~----ei~~l~~~~dG~Idf~EFl~~~~~~~~--- 426 (542)
.++++ +....+..+|..+|.+++|.|+..|++..+...-...... .+...-++.+|.|+|+|++..+.....
T Consensus 68 d~l~~ee~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~ 147 (325)
T KOG4223|consen 68 DQLTPEESQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPD 147 (325)
T ss_pred hhhCcchhHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCcc
Confidence 34444 4566789999999999999999999998876532211112 222222237999999999998875321
Q ss_pred ---C-CCc------HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchh
Q psy15785 427 ---G-TDP------EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIR 496 (542)
Q Consensus 427 ---~-~~~------~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (542)
. ... ...-..-|++-|.|++|.++++||..+| -|++ ..++.+++
T Consensus 148 ~~~d~e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFL-------HPEe-----~p~M~~iV-------------- 201 (325)
T KOG4223|consen 148 EFPDEEDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFL-------HPEE-----HPHMKDIV-------------- 201 (325)
T ss_pred ccccchhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhcc-------Chhh-----cchHHHHH--------------
Confidence 0 000 1123557999999999999999999887 4444 23333333
Q ss_pred HHHHHHHHHHHHHHHHHHhCCC-CCCceeHHHHHHHHhcCCC
Q psy15785 497 LEWMIIVLIMIEVDEMYREAPI-KNGMFDYIEFTRILKHGAK 537 (542)
Q Consensus 497 ~~~Fv~~~~~~~i~~l~~~~D~-~dG~Is~~EF~~~l~~~~~ 537 (542)
+.+-+...|+ +||.|+++||+.-|-....
T Consensus 202 ------------i~Etl~d~Dkn~DG~I~~eEfigd~~~~~~ 231 (325)
T KOG4223|consen 202 ------------IAETLEDIDKNGDGKISLEEFIGDLYSHEG 231 (325)
T ss_pred ------------HHHHHhhcccCCCCceeHHHHHhHHhhccC
Confidence 7888999999 9999999999998876654
No 33
>KOG4223|consensus
Probab=98.53 E-value=1.3e-07 Score=94.74 Aligned_cols=131 Identities=18% Similarity=0.267 Sum_probs=97.2
Q ss_pred HHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCC-----CCHHHHHHHHhcCCCCcchhhhHHHHhhhcCCCC-c---H
Q psy15785 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKN-----PTDDYLEGMMGEAPGPINFTMFLTLFGDRLQGTD-P---E 431 (542)
Q Consensus 361 ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~-----~s~~ei~~l~~~~dG~Idf~EFl~~~~~~~~~~~-~---~ 431 (542)
.+..-++.|+.-|.|++|.++.+||..+|.--..+ +-.+.+..+-++++|.|+++||+.-+........ + .
T Consensus 161 m~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epeWv~ 240 (325)
T KOG4223|consen 161 MIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPEWVL 240 (325)
T ss_pred HHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCccccc
Confidence 45666888999999999999999999888542211 1223344444459999999999998876432111 1 1
Q ss_pred HHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHHH
Q psy15785 432 DVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDE 511 (542)
Q Consensus 432 ~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~~ 511 (542)
.+-.+.|..+|+|++|+++.+|++..+.--+......+ ++.
T Consensus 241 ~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~E---------------------------------------A~h 281 (325)
T KOG4223|consen 241 TEREQFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAE---------------------------------------ARH 281 (325)
T ss_pred ccHHHHHHHhhcCCCCccCHHHHhcccCCCCccHHHHH---------------------------------------HHH
Confidence 12336677889999999999999987755555555566 889
Q ss_pred HHHhCCC-CCCceeHHHHHH
Q psy15785 512 MYREAPI-KNGMFDYIEFTR 530 (542)
Q Consensus 512 l~~~~D~-~dG~Is~~EF~~ 530 (542)
++.+.|. +||++|++|.+.
T Consensus 282 L~~eaD~dkD~kLs~eEIl~ 301 (325)
T KOG4223|consen 282 LLHEADEDKDGKLSKEEILE 301 (325)
T ss_pred HhhhhccCccccccHHHHhh
Confidence 9999999 999999999764
No 34
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.52 E-value=2.7e-07 Score=72.32 Aligned_cols=59 Identities=24% Similarity=0.402 Sum_probs=53.6
Q ss_pred HHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHHHHHH
Q psy15785 435 KNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYR 514 (542)
Q Consensus 435 ~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~~l~~ 514 (542)
+.+|+.+|+|++|.|+.+|++.++...|. ++++ +..+++
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~--~~~~---------------------------------------~~~i~~ 40 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGL--PRSV---------------------------------------LAQIWD 40 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCC--CHHH---------------------------------------HHHHHH
Confidence 57899999999999999999999998874 7777 899999
Q ss_pred hCCC-CCCceeHHHHHHHHhc
Q psy15785 515 EAPI-KNGMFDYIEFTRILKH 534 (542)
Q Consensus 515 ~~D~-~dG~Is~~EF~~~l~~ 534 (542)
.+|. ++|.|+|+||+.++..
T Consensus 41 ~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 41 LADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred HhcCCCCCcCCHHHHHHHHHH
Confidence 9999 9999999999998753
No 35
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.48 E-value=4.1e-07 Score=77.29 Aligned_cols=63 Identities=17% Similarity=0.364 Sum_probs=57.4
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHH
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVD 510 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~ 510 (542)
...++.+|+.+|+|++|.|+.+|++.++...| +++++ ++
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~e---------------------------------------v~ 47 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTL---------------------------------------LA 47 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHH---------------------------------------HH
Confidence 56789999999999999999999999999876 67888 88
Q ss_pred HHHHhCCC-CCCceeHHHHHHHHhc
Q psy15785 511 EMYREAPI-KNGMFDYIEFTRILKH 534 (542)
Q Consensus 511 ~l~~~~D~-~dG~Is~~EF~~~l~~ 534 (542)
.++..+|. ++|.|+|+||+.++..
T Consensus 48 ~i~~~~d~~~~g~I~~~eF~~~~~~ 72 (96)
T smart00027 48 KIWNLADIDNDGELDKDEFALAMHL 72 (96)
T ss_pred HHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 99999999 9999999999998764
No 36
>KOG0032|consensus
Probab=98.47 E-value=1.4e-07 Score=99.81 Aligned_cols=115 Identities=17% Similarity=0.169 Sum_probs=86.4
Q ss_pred hhhhccccccCCCCCCccccc-------ccccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhh---cc
Q psy15785 257 HSINLDSDLLDTPDFYWERDD-------LENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCY---SI 322 (542)
Q Consensus 257 ~~v~l~~~Lld~P~f~w~~~~-------le~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~---~~ 322 (542)
..|++|++|+|.|||+.++.. .+.+.|....|..+|+.++++++.++.. |+|+.++|.|||++. +.
T Consensus 224 ~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~~~ 303 (382)
T KOG0032|consen 224 IGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIGEAT 303 (382)
T ss_pred HHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCcccc
Confidence 367889999999999999965 4788999999999999999999998888 999999999999986 33
Q ss_pred cccchhHHHHhhhhcccccchhHHHHHHhh-HHhhCCHHHHHHHHHHhccccCCCC
Q psy15785 323 LTIIDSKMSSRKTAGRRATTKKRAQRATSN-VFAMFDQAQIQNFKEAFNMIDQNRD 377 (542)
Q Consensus 323 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ls~~ei~~l~~~F~~~D~d~d 377 (542)
..+.......+.+++.. .++.++.... ....++ +..++..|..+|.+++
T Consensus 304 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 353 (382)
T KOG0032|consen 304 NIPLDISVLSRSKQFLS---MSKLKKLALRVLAESLS---ISGLKEMFKLMDTDNN 353 (382)
T ss_pred cccccchhhhhHHHHHH---HHHHHHHHHHHHhhhhh---HHHHHHHHHhhccccc
Confidence 34556666666555441 2222222222 222333 8888999999998776
No 37
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.47 E-value=3.2e-07 Score=76.87 Aligned_cols=64 Identities=19% Similarity=0.338 Sum_probs=55.1
Q ss_pred HHHHHHHHHhccccC-CCCcceeHHHHHHHHHH-cCCCCCH-HHHHHHHhc----CCCCcchhhhHHHHhh
Q psy15785 360 AQIQNFKEAFNMIDQ-NRDGFIDKEDLHDMLAS-LGKNPTD-DYLEGMMGE----APGPINFTMFLTLFGD 423 (542)
Q Consensus 360 ~ei~~l~~~F~~~D~-d~dG~Is~~EL~~~L~~-lg~~~s~-~ei~~l~~~----~dG~Idf~EFl~~~~~ 423 (542)
.-+..+..+|+.||+ +++|+|+..||+.+|+. +|..++. .++..+++. ++|.|+|+||+.++..
T Consensus 5 ~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 5 KAIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 457789999999999 99999999999999999 8876777 888888864 7888888888887764
No 38
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.46 E-value=4e-07 Score=75.98 Aligned_cols=66 Identities=21% Similarity=0.453 Sum_probs=57.5
Q ss_pred HHHHHHHHhhhCC--CCCCcccHHHHHHHHHH-cCCCC----CHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHH
Q psy15785 431 EDVIKNAFGCFDE--DNSGIINEERLRELLTS-MGDRF----TDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIV 503 (542)
Q Consensus 431 ~~~l~~aF~~~D~--d~~G~Is~eEL~~~L~~-~g~~l----s~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~ 503 (542)
.+.++.+|..||+ |++|.|+.+||..++.. +|..+ +.++
T Consensus 7 ~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~e---------------------------------- 52 (88)
T cd00213 7 IETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEA---------------------------------- 52 (88)
T ss_pred HHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHH----------------------------------
Confidence 5678999999999 89999999999999986 55444 4677
Q ss_pred HHHHHHHHHHHhCCC-CCCceeHHHHHHHHhcC
Q psy15785 504 LIMIEVDEMYREAPI-KNGMFDYIEFTRILKHG 535 (542)
Q Consensus 504 ~~~~~i~~l~~~~D~-~dG~Is~~EF~~~l~~~ 535 (542)
++.++..+|. ++|.|+|++|+.++...
T Consensus 53 -----i~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 53 -----VDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred -----HHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 9999999999 99999999999988754
No 39
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.44 E-value=6.4e-07 Score=75.10 Aligned_cols=65 Identities=12% Similarity=0.294 Sum_probs=56.0
Q ss_pred HHHHHHHHhh-hCCCCCC-cccHHHHHHHHHHc-----CCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHH
Q psy15785 431 EDVIKNAFGC-FDEDNSG-IINEERLRELLTSM-----GDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIV 503 (542)
Q Consensus 431 ~~~l~~aF~~-~D~d~~G-~Is~eEL~~~L~~~-----g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~ 503 (542)
...+..+|+. +|+||+| +||.+||+.++... +...++.+
T Consensus 8 i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~---------------------------------- 53 (89)
T cd05023 8 IESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGV---------------------------------- 53 (89)
T ss_pred HHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHH----------------------------------
Confidence 4578999999 7888976 99999999999875 33456667
Q ss_pred HHHHHHHHHHHhCCC-CCCceeHHHHHHHHhc
Q psy15785 504 LIMIEVDEMYREAPI-KNGMFDYIEFTRILKH 534 (542)
Q Consensus 504 ~~~~~i~~l~~~~D~-~dG~Is~~EF~~~l~~ 534 (542)
++.+++.+|. +||.|+|+||+.+|..
T Consensus 54 -----~~~ll~~~D~d~DG~I~f~EF~~l~~~ 80 (89)
T cd05023 54 -----LDRMMKKLDLNSDGQLDFQEFLNLIGG 80 (89)
T ss_pred -----HHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 9999999999 9999999999999875
No 40
>PTZ00183 centrin; Provisional
Probab=98.42 E-value=1.4e-06 Score=79.99 Aligned_cols=92 Identities=23% Similarity=0.374 Sum_probs=67.4
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhccc--ccccchhHHHHHHHHHHH-
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHL--SDKHHIRLEWMIIVLIMI- 507 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Fv~~~~~~- 507 (542)
...+..+|..+|.+++|.|+.+||..++..+|..++... ++.+...+ ++++.+++++|+.++...
T Consensus 16 ~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~------------~~~l~~~~d~~~~g~i~~~eF~~~~~~~~ 83 (158)
T PTZ00183 16 KKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEE------------IKQMIADVDKDGSGKIDFEEFLDIMTKKL 83 (158)
T ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHH------------HHHHHHHhCCCCCCcEeHHHHHHHHHHHh
Confidence 455777788888888888888888888877776666555 22222222 356778888887754432
Q ss_pred -------HHHHHHHhCCC-CCCceeHHHHHHHHhc
Q psy15785 508 -------EVDEMYREAPI-KNGMFDYIEFTRILKH 534 (542)
Q Consensus 508 -------~i~~l~~~~D~-~dG~Is~~EF~~~l~~ 534 (542)
++..+|+.+|. ++|.|+.+||..++..
T Consensus 84 ~~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~ 118 (158)
T PTZ00183 84 GERDPREEILKAFRLFDDDKTGKISLKNLKRVAKE 118 (158)
T ss_pred cCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 38899999999 9999999999999875
No 41
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.41 E-value=4.9e-07 Score=68.15 Aligned_cols=51 Identities=27% Similarity=0.625 Sum_probs=47.8
Q ss_pred CCCcccHHHHHHHHHHcCCC-CCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHHHHHHhCCC-CCCc
Q psy15785 445 NSGIINEERLRELLTSMGDR-FTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYREAPI-KNGM 522 (542)
Q Consensus 445 ~~G~Is~eEL~~~L~~~g~~-ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~~l~~~~D~-~dG~ 522 (542)
++|.|+.++|+.+|..+|.. +++++ ++.+|..+|. ++|.
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e---------------------------------------~~~l~~~~D~~~~G~ 41 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEE---------------------------------------VDRLFREFDTDGDGY 41 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHH---------------------------------------HHHHHHHHTTSSSSS
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHH---------------------------------------HHHHHHhcccCCCCC
Confidence 47999999999999888998 99999 9999999999 9999
Q ss_pred eeHHHHHHHHhc
Q psy15785 523 FDYIEFTRILKH 534 (542)
Q Consensus 523 Is~~EF~~~l~~ 534 (542)
|+|+||+.++..
T Consensus 42 I~~~EF~~~~~~ 53 (54)
T PF13833_consen 42 ISFDEFISMMQR 53 (54)
T ss_dssp EEHHHHHHHHHH
T ss_pred CCHHHHHHHHHh
Confidence 999999999864
No 42
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.41 E-value=8.4e-07 Score=75.39 Aligned_cols=65 Identities=15% Similarity=0.294 Sum_probs=51.0
Q ss_pred hCCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhc----CCCCcchhhhHHHHh
Q psy15785 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTMFLTLFG 422 (542)
Q Consensus 356 ~ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~----~dG~Idf~EFl~~~~ 422 (542)
.++++++..++.+|..+|.+++|.|+.+|++.+|+.+| ++..++..++.. ++|.|+|+||+.++.
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~ 71 (96)
T smart00027 3 AISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMH 71 (96)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 36889999999999999999999999999999998865 455666666553 456666666665554
No 43
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.41 E-value=8.1e-07 Score=74.33 Aligned_cols=64 Identities=14% Similarity=0.357 Sum_probs=56.0
Q ss_pred HHHHHHHHHhcccc-CCCCc-ceeHHHHHHHHHH-----cCCCCCHHHHHHHHhc----CCCCcchhhhHHHHhh
Q psy15785 360 AQIQNFKEAFNMID-QNRDG-FIDKEDLHDMLAS-----LGKNPTDDYLEGMMGE----APGPINFTMFLTLFGD 423 (542)
Q Consensus 360 ~ei~~l~~~F~~~D-~d~dG-~Is~~EL~~~L~~-----lg~~~s~~ei~~l~~~----~dG~Idf~EFl~~~~~ 423 (542)
.-+..++++|+.+| .|++| .|+.+||+.+|+. +|..+++.++..+++. ++|.|+|.||+.++..
T Consensus 5 ~~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 5 KAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 34678999999998 79999 6999999999999 8988999999998885 6789999999887764
No 44
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.39 E-value=1.4e-06 Score=65.87 Aligned_cols=61 Identities=34% Similarity=0.716 Sum_probs=56.4
Q ss_pred HHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHHHHH
Q psy15785 434 IKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMY 513 (542)
Q Consensus 434 l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~~l~ 513 (542)
+..+|+.+|.+++|.|+.+++..++..+|...+.+. +..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~---------------------------------------~~~~~ 42 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEE---------------------------------------IDEMI 42 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHH---------------------------------------HHHHH
Confidence 578899999999999999999999999998888888 88999
Q ss_pred HhCCC-CCCceeHHHHHHHHh
Q psy15785 514 REAPI-KNGMFDYIEFTRILK 533 (542)
Q Consensus 514 ~~~D~-~dG~Is~~EF~~~l~ 533 (542)
..+|. ++|.|++++|+.+++
T Consensus 43 ~~~~~~~~~~l~~~ef~~~~~ 63 (63)
T cd00051 43 REVDKDGDGKIDFEEFLELMA 63 (63)
T ss_pred HHhCCCCCCeEeHHHHHHHhC
Confidence 99999 999999999998763
No 45
>PTZ00184 calmodulin; Provisional
Probab=98.31 E-value=4.7e-06 Score=75.47 Aligned_cols=92 Identities=20% Similarity=0.377 Sum_probs=65.2
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhccc--ccccchhHHHHHHHHHHH-
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHL--SDKHHIRLEWMIIVLIMI- 507 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Fv~~~~~~- 507 (542)
...++.+|+.+|.+++|.|+.+||..++..+|...+.++ +..+...+ +++|.+++++|+.++...
T Consensus 10 ~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~------------~~~~~~~~d~~~~g~i~~~ef~~~l~~~~ 77 (149)
T PTZ00184 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE------------LQDMINEVDADGNGTIDFPEFLTLMARKM 77 (149)
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHH------------HHHHHHhcCcCCCCcCcHHHHHHHHHHhc
Confidence 345677777777777777777777777777766555544 22233323 355677777777755432
Q ss_pred -------HHHHHHHhCCC-CCCceeHHHHHHHHhc
Q psy15785 508 -------EVDEMYREAPI-KNGMFDYIEFTRILKH 534 (542)
Q Consensus 508 -------~i~~l~~~~D~-~dG~Is~~EF~~~l~~ 534 (542)
.+..+|+.+|. ++|.|+.++|..++..
T Consensus 78 ~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~ 112 (149)
T PTZ00184 78 KDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTN 112 (149)
T ss_pred cCCcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHH
Confidence 28889999999 9999999999988865
No 46
>KOG0028|consensus
Probab=98.30 E-value=3.6e-06 Score=76.37 Aligned_cols=94 Identities=24% Similarity=0.322 Sum_probs=77.8
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccc--cccchhHHHHHHHHHHH-
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLS--DKHHIRLEWMIIVLIMI- 507 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Fv~~~~~~- 507 (542)
..+++.+|..||.+++|+|+.+||+-++.++|+....++ +.-++..++ +.|.++|++|.......
T Consensus 32 ~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~e------------i~kll~d~dk~~~g~i~fe~f~~~mt~k~ 99 (172)
T KOG0028|consen 32 KQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEE------------ILKLLADVDKEGSGKITFEDFRRVMTVKL 99 (172)
T ss_pred HhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHH------------HHHHHHhhhhccCceechHHHHHHHHHHH
Confidence 367889999999999999999999999999998888777 344444444 47899999999875544
Q ss_pred -------HHHHHHHhCCC-CCCceeHHHHHHHHhcCC
Q psy15785 508 -------EVDEMYREAPI-KNGMFDYIEFTRILKHGA 536 (542)
Q Consensus 508 -------~i~~l~~~~D~-~dG~Is~~EF~~~l~~~~ 536 (542)
++..+|+.+|. ++|+||..+|+.++..-.
T Consensus 100 ~e~dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeLg 136 (172)
T KOG0028|consen 100 GERDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKELG 136 (172)
T ss_pred hccCcHHHHHHHHHcccccCCCCcCHHHHHHHHHHhC
Confidence 39999999999 999999999999987643
No 47
>PF02582 DUF155: Uncharacterised ACR, YagE family COG1723; InterPro: IPR003734 This entry describes proteins of unknown function.
Probab=98.26 E-value=5.5e-07 Score=85.24 Aligned_cols=53 Identities=40% Similarity=0.752 Sum_probs=48.4
Q ss_pred eeeeeccCceEeeccchHHHHHHHHHHhhhhccchhhHhhhhcccccccccCcch
Q psy15785 188 FIYFFQEGSLVAWNVSDLEIENLLEFLKQFEIKPYEKAVVLNEKELMNYTYSPNI 242 (542)
Q Consensus 188 ~~~~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~e~~~~~~~~~~ 242 (542)
++|+|+.|+|||||+++.+++.+|+.|++|...||+...++ .|.|.|.|+++.
T Consensus 1 dvf~F~~G~vVfw~~~~~~~~~~l~~l~~~~~~~~~~~~~~--~e~~~~~~~~~~ 53 (175)
T PF02582_consen 1 DVFLFRYGVVVFWGVSEEEEKQFLDYLKPFEEEPLSEPEVE--TEEMNYIYDPNL 53 (175)
T ss_pred CEEEecCcEEEEEeCCHHHHHHHHHHHHHHHhCCCccccce--eEEEEEEEeCCC
Confidence 58999999999999999999999999999999999988876 788999887554
No 48
>KOG0044|consensus
Probab=98.21 E-value=1.4e-05 Score=76.17 Aligned_cols=101 Identities=14% Similarity=0.232 Sum_probs=80.5
Q ss_pred CCCHHHHHHHHhc-----CCCCcchhhhHHHHhhhcCCCCcHHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHH
Q psy15785 395 NPTDDYLEGMMGE-----APGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDED 469 (542)
Q Consensus 395 ~~s~~ei~~l~~~-----~dG~Idf~EFl~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e 469 (542)
..+..++..+.+. .+|.++-.+|..++.......++..-...+|+.||.|++|.|+..||-.+|...-..-.++-
T Consensus 22 ~f~~~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~eek 101 (193)
T KOG0044|consen 22 KFSKKEIQQWYRGFKNECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTLEEK 101 (193)
T ss_pred CCCHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcHHHH
Confidence 3566666666665 68999999999999887766777778899999999999999999998888765432222222
Q ss_pred HhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHHHHHHhCCC-CCCceeHHHHHHHHhc
Q psy15785 470 VMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYREAPI-KNGMFDYIEFTRILKH 534 (542)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~~l~~~~D~-~dG~Is~~EF~~~l~~ 534 (542)
+.-.|+.+|. ++|.|+++|++.++..
T Consensus 102 ---------------------------------------l~w~F~lyD~dgdG~It~~Eml~iv~~ 128 (193)
T KOG0044|consen 102 ---------------------------------------LKWAFRLYDLDGDGYITKEEMLKIVQA 128 (193)
T ss_pred ---------------------------------------hhhhheeecCCCCceEcHHHHHHHHHH
Confidence 5567999999 9999999999998764
No 49
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.18 E-value=3.7e-06 Score=70.12 Aligned_cols=65 Identities=20% Similarity=0.455 Sum_probs=53.1
Q ss_pred HHHHHHHHHHhccccC--CCCcceeHHHHHHHHHH-cCCC----CCHHHHHHHHhc----CCCCcchhhhHHHHhh
Q psy15785 359 QAQIQNFKEAFNMIDQ--NRDGFIDKEDLHDMLAS-LGKN----PTDDYLEGMMGE----APGPINFTMFLTLFGD 423 (542)
Q Consensus 359 ~~ei~~l~~~F~~~D~--d~dG~Is~~EL~~~L~~-lg~~----~s~~ei~~l~~~----~dG~Idf~EFl~~~~~ 423 (542)
+++++.++++|..+|+ +++|.|+.+||..+++. +|.. ++..++..++.. ++|.|+|++|+.++..
T Consensus 4 ~~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~ 79 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGK 79 (88)
T ss_pred HHHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHH
Confidence 5788899999999999 89999999999999986 5543 357778777765 5678888888887764
No 50
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.17 E-value=5.5e-06 Score=69.33 Aligned_cols=65 Identities=17% Similarity=0.395 Sum_probs=55.8
Q ss_pred HHHHHHHHHHhccccC-CC-CcceeHHHHHHHHHH---cCCCCCHHHHHHHHhc----CCCCcchhhhHHHHhh
Q psy15785 359 QAQIQNFKEAFNMIDQ-NR-DGFIDKEDLHDMLAS---LGKNPTDDYLEGMMGE----APGPINFTMFLTLFGD 423 (542)
Q Consensus 359 ~~ei~~l~~~F~~~D~-d~-dG~Is~~EL~~~L~~---lg~~~s~~ei~~l~~~----~dG~Idf~EFl~~~~~ 423 (542)
++.+..+-.+|+++|. +| +|+|+.+||+.+|+. +|..++.+++.++++. ++|.|+|+||+.++..
T Consensus 6 e~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~ 79 (88)
T cd05029 6 DQAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGA 79 (88)
T ss_pred HHHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 3556778999999998 67 899999999999973 7888999999999885 7899999999887764
No 51
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.17 E-value=5.3e-06 Score=70.18 Aligned_cols=64 Identities=16% Similarity=0.367 Sum_probs=46.6
Q ss_pred HHHHHHHHHhcccc-CCCCc-ceeHHHHHHHHHH-c----CCCCCHHHHHHHHhc----CCCCcchhhhHHHHhh
Q psy15785 360 AQIQNFKEAFNMID-QNRDG-FIDKEDLHDMLAS-L----GKNPTDDYLEGMMGE----APGPINFTMFLTLFGD 423 (542)
Q Consensus 360 ~ei~~l~~~F~~~D-~d~dG-~Is~~EL~~~L~~-l----g~~~s~~ei~~l~~~----~dG~Idf~EFl~~~~~ 423 (542)
.-+..+.++|+.|| .|++| +|+..||+.+|+. + +...+..++.++++. ++|.|+|.||+.++..
T Consensus 7 ~a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~ 81 (93)
T cd05026 7 GAMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAA 81 (93)
T ss_pred HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 34677899999999 78998 5999999999976 3 233455666666664 5666777777666554
No 52
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.17 E-value=4.7e-06 Score=70.54 Aligned_cols=63 Identities=14% Similarity=0.366 Sum_probs=49.1
Q ss_pred HHHHHHHHhccccC-CC-CcceeHHHHHHHHHH-----cCCCCCHHHHHHHHhc----CCCCcchhhhHHHHhh
Q psy15785 361 QIQNFKEAFNMIDQ-NR-DGFIDKEDLHDMLAS-----LGKNPTDDYLEGMMGE----APGPINFTMFLTLFGD 423 (542)
Q Consensus 361 ei~~l~~~F~~~D~-d~-dG~Is~~EL~~~L~~-----lg~~~s~~ei~~l~~~----~dG~Idf~EFl~~~~~ 423 (542)
-...++.+|..+|. |+ +|.|+.+||+.+|+. +|..++..++..++.. ++|.|+|++|+.++..
T Consensus 6 ~~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 6 AMESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 35678999999997 97 799999999999986 4667777777777664 5677777777766653
No 53
>PF14658 EF-hand_9: EF-hand domain
Probab=98.17 E-value=5.1e-06 Score=64.89 Aligned_cols=60 Identities=18% Similarity=0.379 Sum_probs=54.2
Q ss_pred HHHhhhCCCCCCcccHHHHHHHHHHcCC-CCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHHHHHH
Q psy15785 436 NAFGCFDEDNSGIINEERLRELLTSMGD-RFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYR 514 (542)
Q Consensus 436 ~aF~~~D~d~~G~Is~eEL~~~L~~~g~-~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~~l~~ 514 (542)
.+|.+||.++.|.|...++..+|+.+|. ..++.+ ++.+.+
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~---------------------------------------Lq~l~~ 42 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESE---------------------------------------LQDLIN 42 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHH---------------------------------------HHHHHH
Confidence 4799999999999999999999999998 556666 999999
Q ss_pred hCCC-CC-CceeHHHHHHHHhc
Q psy15785 515 EAPI-KN-GMFDYIEFTRILKH 534 (542)
Q Consensus 515 ~~D~-~d-G~Is~~EF~~~l~~ 534 (542)
++|+ +. |.|+++.|+.+|+.
T Consensus 43 elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 43 ELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred HhCCCCCCceEeHHHHHHHHHH
Confidence 9999 55 99999999999974
No 54
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.14 E-value=6.5e-06 Score=72.41 Aligned_cols=60 Identities=13% Similarity=0.287 Sum_probs=51.2
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHH
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVD 510 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~ 510 (542)
...+..+|..+|.|++|.||.+||..+. ++ ..+.. +.
T Consensus 47 ~~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l~--~~e~~---------------------------------------~~ 83 (116)
T cd00252 47 KDPVGWMFNQLDGNYDGKLSHHELAPIR--LD--PNEHC---------------------------------------IK 83 (116)
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHH--cc--chHHH---------------------------------------HH
Confidence 5678999999999999999999999876 21 12233 88
Q ss_pred HHHHhCCC-CCCceeHHHHHHHHh
Q psy15785 511 EMYREAPI-KNGMFDYIEFTRILK 533 (542)
Q Consensus 511 ~l~~~~D~-~dG~Is~~EF~~~l~ 533 (542)
.+|..+|. +||.||++||...+.
T Consensus 84 ~f~~~~D~n~Dg~IS~~Ef~~cl~ 107 (116)
T cd00252 84 PFFESCDLDKDGSISLDEWCYCFI 107 (116)
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHh
Confidence 89999999 999999999999994
No 55
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.14 E-value=6.8e-06 Score=69.24 Aligned_cols=62 Identities=23% Similarity=0.480 Sum_probs=48.0
Q ss_pred HHHHHHHhcccc-CCCCc-ceeHHHHHHHHHH-cC----CCCCHHHHHHHHhc----CCCCcchhhhHHHHhh
Q psy15785 362 IQNFKEAFNMID-QNRDG-FIDKEDLHDMLAS-LG----KNPTDDYLEGMMGE----APGPINFTMFLTLFGD 423 (542)
Q Consensus 362 i~~l~~~F~~~D-~d~dG-~Is~~EL~~~L~~-lg----~~~s~~ei~~l~~~----~dG~Idf~EFl~~~~~ 423 (542)
+..++++|+.|| .+++| .|+..||+.+|+. +| ..++..++..++.. ++|.|+|.+|+.++..
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 567899999997 99999 5999999999985 54 34567777777764 5677777777776654
No 56
>KOG0031|consensus
Probab=98.12 E-value=2e-05 Score=71.09 Aligned_cols=91 Identities=22% Similarity=0.344 Sum_probs=75.0
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHH---
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMI--- 507 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~--- 507 (542)
..++++||.++|+|++|.|.+++|+.++.++|...++++ +++++... .+.|+|.-|.-..-..
T Consensus 31 IqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~e------------lDaM~~Ea--~gPINft~FLTmfGekL~g 96 (171)
T KOG0031|consen 31 IQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEE------------LDAMMKEA--PGPINFTVFLTMFGEKLNG 96 (171)
T ss_pred HHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHH------------HHHHHHhC--CCCeeHHHHHHHHHHHhcC
Confidence 678999999999999999999999999999999999888 44444332 4577777777644333
Q ss_pred ---H--HHHHHHhCCC-CCCceeHHHHHHHHhcC
Q psy15785 508 ---E--VDEMYREAPI-KNGMFDYIEFTRILKHG 535 (542)
Q Consensus 508 ---~--i~~l~~~~D~-~dG~Is~~EF~~~l~~~ 535 (542)
+ +...|+.+|. ++|.|.-+.+.++|+..
T Consensus 97 tdpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~ 130 (171)
T KOG0031|consen 97 TDPEEVILNAFKTFDDEGSGKIDEDYLRELLTTM 130 (171)
T ss_pred CCHHHHHHHHHHhcCccCCCccCHHHHHHHHHHh
Confidence 2 8889999999 99999999999998864
No 57
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.10 E-value=7.4e-06 Score=68.53 Aligned_cols=66 Identities=12% Similarity=0.368 Sum_probs=56.1
Q ss_pred HHHHHHHHhhhCCC--CCCcccHHHHHHHHH-HcCCCCC----HHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHH
Q psy15785 431 EDVIKNAFGCFDED--NSGIINEERLRELLT-SMGDRFT----DEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIV 503 (542)
Q Consensus 431 ~~~l~~aF~~~D~d--~~G~Is~eEL~~~L~-~~g~~ls----~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~ 503 (542)
...+...|..|+.. ++|.|+.+||+.+|. .+|..++ +++
T Consensus 7 i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~---------------------------------- 52 (88)
T cd05030 7 IETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKA---------------------------------- 52 (88)
T ss_pred HHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHH----------------------------------
Confidence 45678899999865 489999999999997 5566565 777
Q ss_pred HHHHHHHHHHHhCCC-CCCceeHHHHHHHHhcC
Q psy15785 504 LIMIEVDEMYREAPI-KNGMFDYIEFTRILKHG 535 (542)
Q Consensus 504 ~~~~~i~~l~~~~D~-~dG~Is~~EF~~~l~~~ 535 (542)
++.+|+.+|. ++|.|+|+||+.++...
T Consensus 53 -----v~~i~~~~D~d~dG~I~f~eF~~~~~~~ 80 (88)
T cd05030 53 -----IDKIFEDLDTNQDGQLSFEEFLVLVIKV 80 (88)
T ss_pred -----HHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 9999999999 99999999999998753
No 58
>KOG0604|consensus
Probab=98.08 E-value=1.3e-06 Score=87.27 Aligned_cols=64 Identities=16% Similarity=0.105 Sum_probs=57.9
Q ss_pred hhccccccCCCCCCccccc-----------ccccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhhcc
Q psy15785 259 INLDSDLLDTPDFYWERDD-----------LENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCYSI 322 (542)
Q Consensus 259 v~l~~~Lld~P~f~w~~~~-----------le~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~~ 322 (542)
|+.|++|||+||||-..-. .+.+-|.-.+|..+|+.+|+++|++|-. |+|..+.++|||+.+..
T Consensus 251 VimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~ 329 (400)
T KOG0604|consen 251 VIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYE 329 (400)
T ss_pred HHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccc
Confidence 8999999999999987753 5899999999999999999999988766 99999999999998744
No 59
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.06 E-value=7.6e-06 Score=63.98 Aligned_cols=56 Identities=18% Similarity=0.305 Sum_probs=44.8
Q ss_pred HHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhc----CCCCcchhhhHHHHhh
Q psy15785 366 KEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTMFLTLFGD 423 (542)
Q Consensus 366 ~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~----~dG~Idf~EFl~~~~~ 423 (542)
+++|..+|++++|.|+.+|+..++..+|. +..++..++.. ++|.|+|.||+.++..
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~--~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGL--PRSVLAQIWDLADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCC--CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 57899999999999999999999998874 66667666664 4677777777776653
No 60
>KOG0040|consensus
Probab=98.05 E-value=4.8e-05 Score=88.26 Aligned_cols=106 Identities=19% Similarity=0.368 Sum_probs=88.0
Q ss_pred hCCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCC-------HHHHHHHHhc----CCCCcchhhhHHHHhhh
Q psy15785 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPT-------DDYLEGMMGE----APGPINFTMFLTLFGDR 424 (542)
Q Consensus 356 ~ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s-------~~ei~~l~~~----~dG~Idf~EFl~~~~~~ 424 (542)
..|++++.++.-+|..||++.+|.++..+|+.+|+++|++++ +.++..++.- .+|.|+..+|+++|...
T Consensus 2246 GVtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ 2325 (2399)
T KOG0040|consen 2246 GVTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISK 2325 (2399)
T ss_pred CCCHHHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhc
Confidence 389999999999999999999999999999999999998652 2356666654 68999999999999864
Q ss_pred cC-CCCcHHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHH
Q psy15785 425 LQ-GTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDED 469 (542)
Q Consensus 425 ~~-~~~~~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e 469 (542)
-. +..+.+.+..||+.+|. +.-+|+.+++.+. +++++
T Consensus 2326 ETeNI~s~~eIE~AfraL~a-~~~yvtke~~~~~-------ltreq 2363 (2399)
T KOG0040|consen 2326 ETENILSSEEIEDAFRALDA-GKPYVTKEELYQN-------LTREQ 2363 (2399)
T ss_pred ccccccchHHHHHHHHHhhc-CCccccHHHHHhc-------CCHHH
Confidence 32 23445689999999998 8889999999765 47777
No 61
>KOG2562|consensus
Probab=98.02 E-value=3.6e-05 Score=80.72 Aligned_cols=99 Identities=22% Similarity=0.409 Sum_probs=76.8
Q ss_pred CHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhc--------CCCCcchhhhHHHHhhhcCCCC
Q psy15785 358 DQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE--------APGPINFTMFLTLFGDRLQGTD 429 (542)
Q Consensus 358 s~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~--------~dG~Idf~EFl~~~~~~~~~~~ 429 (542)
+-+.-..+.-.|-.+|+|+||.|+.++|...-. ..++..-++.++.. .+|+++|.+|+-++... ....
T Consensus 273 S~e~f~viy~kFweLD~Dhd~lidk~~L~ry~d---~tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~-e~k~ 348 (493)
T KOG2562|consen 273 SYEHFYVIYCKFWELDTDHDGLIDKEDLKRYGD---HTLTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAE-EDKD 348 (493)
T ss_pred eHHHHHHHHHHHhhhccccccccCHHHHHHHhc---cchhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHh-ccCC
Confidence 333444455558889999999999999876533 23456667788872 68999999999998864 4455
Q ss_pred cHHHHHHHHhhhCCCCCCcccHHHHHHHHHH
Q psy15785 430 PEDVIKNAFGCFDEDNSGIINEERLRELLTS 460 (542)
Q Consensus 430 ~~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~ 460 (542)
+..-+.--|+++|.+++|.|+..|++-+...
T Consensus 349 t~~SleYwFrclDld~~G~Lt~~el~~fyee 379 (493)
T KOG2562|consen 349 TPASLEYWFRCLDLDGDGILTLNELRYFYEE 379 (493)
T ss_pred CccchhhheeeeeccCCCcccHHHHHHHHHH
Confidence 5677899999999999999999999877654
No 62
>PLN02964 phosphatidylserine decarboxylase
Probab=97.94 E-value=4.3e-05 Score=85.18 Aligned_cols=63 Identities=16% Similarity=0.384 Sum_probs=55.8
Q ss_pred HHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHHHHH
Q psy15785 434 IKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMY 513 (542)
Q Consensus 434 l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~~l~ 513 (542)
+..+|+.+|.|++|.|+.+||..++..+|...++++ +..+|
T Consensus 181 i~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~~seEE---------------------------------------L~eaF 221 (644)
T PLN02964 181 ARRILAIVDYDEDGQLSFSEFSDLIKAFGNLVAANK---------------------------------------KEELF 221 (644)
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHHHhccCCCHHH---------------------------------------HHHHH
Confidence 788888888888888888888888888877677777 99999
Q ss_pred HhCCC-CCCceeHHHHHHHHhcC
Q psy15785 514 REAPI-KNGMFDYIEFTRILKHG 535 (542)
Q Consensus 514 ~~~D~-~dG~Is~~EF~~~l~~~ 535 (542)
+.+|. ++|.|+++||.++|...
T Consensus 222 k~fDkDgdG~Is~dEL~~vL~~~ 244 (644)
T PLN02964 222 KAADLNGDGVVTIDELAALLALQ 244 (644)
T ss_pred HHhCCCCCCcCCHHHHHHHHHhc
Confidence 99999 99999999999999874
No 63
>KOG0041|consensus
Probab=97.93 E-value=3.3e-05 Score=72.55 Aligned_cols=106 Identities=29% Similarity=0.465 Sum_probs=80.9
Q ss_pred HHhhCCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhc----CCCCcchhhhHHHHhhhcCCC
Q psy15785 353 VFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTMFLTLFGDRLQGT 428 (542)
Q Consensus 353 ~~~~ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~----~dG~Idf~EFl~~~~~~~~~~ 428 (542)
.+..++..+|+.+..+|..+|.+.||+|+..||+.+|.+||.+.|---++.++.. .+|+|+|.||+-++.....+.
T Consensus 89 eF~eFsrkqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrkaaagE 168 (244)
T KOG0041|consen 89 EFSEFSRKQIKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKAAAGE 168 (244)
T ss_pred hhhHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHHHhccc
Confidence 3447888999999999999999999999999999999999988877777777765 689999999999887655443
Q ss_pred CcHHH-HHHH--HhhhCCCCCCcccHHHHHHHH
Q psy15785 429 DPEDV-IKNA--FGCFDEDNSGIINEERLRELL 458 (542)
Q Consensus 429 ~~~~~-l~~a--F~~~D~d~~G~Is~eEL~~~L 458 (542)
...+. +... -...|...-|.-....|-++=
T Consensus 169 L~~ds~~~~LAr~~eVDVskeGV~GAknFFeAK 201 (244)
T KOG0041|consen 169 LQEDSGLLRLARLSEVDVSKEGVSGAKNFFEAK 201 (244)
T ss_pred cccchHHHHHHHhcccchhhhhhhhHHHHHHHH
Confidence 32222 2222 233677777777776665543
No 64
>KOG0751|consensus
Probab=97.93 E-value=8.6e-05 Score=78.10 Aligned_cols=159 Identities=19% Similarity=0.337 Sum_probs=113.3
Q ss_pred HHHHHHHHhc---cccCCCCcceeHHHHHHHHHH-cCCCCCHHHHHHHHhc-----CCCCcchhhhHHHHhhhcCCCCcH
Q psy15785 361 QIQNFKEAFN---MIDQNRDGFIDKEDLHDMLAS-LGKNPTDDYLEGMMGE-----APGPINFTMFLTLFGDRLQGTDPE 431 (542)
Q Consensus 361 ei~~l~~~F~---~~D~d~dG~Is~~EL~~~L~~-lg~~~s~~ei~~l~~~-----~dG~Idf~EFl~~~~~~~~~~~~~ 431 (542)
+-++++.+|- ..+.++...++.++|....-. ++.+-..+++..++.. .||-|+|+||+++=.-+.. +.
T Consensus 31 ~~~eLr~if~~~as~e~~ge~~mt~edFv~~ylgL~~e~~~n~~~v~Lla~iaD~tKDglisf~eF~afe~~lC~---pD 107 (694)
T KOG0751|consen 31 DPKELRSIFLKYASIEKNGESYMTPEDFVRRYLGLYNESNFNDKIVRLLASIADQTKDGLISFQEFRAFESVLCA---PD 107 (694)
T ss_pred ChHHHHHHHHHHhHHhhccccccCHHHHHHHHHhhcccccCChHHHHHHHhhhhhcccccccHHHHHHHHhhccC---ch
Confidence 3445555554 457788889999999766543 3444445556566654 7899999999987654332 35
Q ss_pred HHHHHHHhhhCCCCCCcccHHHHHHHHHHcCC----CCCHHHHhhhhhhhhhhHhhhhhcccc--cccchhHHHHHHHHH
Q psy15785 432 DVIKNAFGCFDEDNSGIINEERLRELLTSMGD----RFTDEDVMNEKLNHCLELVDLLSSHLS--DKHHIRLEWMIIVLI 505 (542)
Q Consensus 432 ~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~----~ls~~e~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Fv~~~~ 505 (542)
.....+|+.||+.++|.+|.++++.++.+... +++-+- ++ + ..++. +..+++|++|.+++-
T Consensus 108 al~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~---ef-------I---~~~Fg~~~~r~~ny~~f~Q~lh 174 (694)
T KOG0751|consen 108 ALFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDS---EF-------I---KLHFGDIRKRHLNYAEFTQFLH 174 (694)
T ss_pred HHHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCc---ch-------H---HHHhhhHHHHhccHHHHHHHHH
Confidence 66788999999999999999999999987532 111111 11 1 11232 456889999999877
Q ss_pred HHH---HHHHHHhCCC-CCCceeHHHHHHHHhcC
Q psy15785 506 MIE---VDEMYREAPI-KNGMFDYIEFTRILKHG 535 (542)
Q Consensus 506 ~~~---i~~l~~~~D~-~dG~Is~~EF~~~l~~~ 535 (542)
..+ ..+.|++.|. ++|.|+--+|..+|.+.
T Consensus 175 ~~~~E~~~qafr~~d~~~ng~is~Ldfq~imvt~ 208 (694)
T KOG0751|consen 175 EFQLEHAEQAFREKDKAKNGFISVLDFQDIMVTI 208 (694)
T ss_pred HHHHHHHHHHHHHhcccCCCeeeeechHhhhhhh
Confidence 664 8889999999 99999988888887654
No 65
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.87 E-value=1.7e-05 Score=51.98 Aligned_cols=29 Identities=34% Similarity=0.651 Sum_probs=26.4
Q ss_pred HHHHHHhhhCCCCCCcccHHHHHHHHHHc
Q psy15785 433 VIKNAFGCFDEDNSGIINEERLRELLTSM 461 (542)
Q Consensus 433 ~l~~aF~~~D~d~~G~Is~eEL~~~L~~~ 461 (542)
+++.+|+.||+|++|+|+.+||..++.++
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHT
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHhC
Confidence 47899999999999999999999999764
No 66
>COG1723 Uncharacterized conserved protein [Function unknown]
Probab=97.86 E-value=9.2e-06 Score=81.48 Aligned_cols=54 Identities=28% Similarity=0.476 Sum_probs=48.6
Q ss_pred CCCcceeeeeccCceEeeccchHHHHHHHHHHhhhhccchhhHhhhhccccccccc
Q psy15785 183 GKEPRFIYFFQEGSLVAWNVSDLEIENLLEFLKQFEIKPYEKAVVLNEKELMNYTY 238 (542)
Q Consensus 183 ~~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~e~~~~~~ 238 (542)
+.+.+++|+|..|+|||||+++.|.+++++.+...+..|+....+ |.|.|+|.|
T Consensus 102 ~~~~~~~f~f~yGvVV~Wg~se~eE~~iL~~i~~~~~~~L~e~e~--E~e~fhy~~ 155 (331)
T COG1723 102 DEEFGEAFFFPYGVVVFWGFSESEEKNILRDITKAESNPLKEPEI--ETEEFHYNV 155 (331)
T ss_pred CcccceEEEecCceEEEeCCcHHHHhhHHHhhhhcccCCCCCccc--eEEEEEeee
Confidence 467899999999999999999999999999999999999987765 677888866
No 67
>KOG0030|consensus
Probab=97.84 E-value=0.00015 Score=64.52 Aligned_cols=95 Identities=21% Similarity=0.308 Sum_probs=75.0
Q ss_pred CcHHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhccccc---ccchhHHHHHHHHH
Q psy15785 429 DPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSD---KHHIRLEWMIIVLI 505 (542)
Q Consensus 429 ~~~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Fv~~~~ 505 (542)
+...+++++|..||..++|.|+..+.-.+|+.+|.+-++.+| .+++...-.. -..++|+.|..+.-
T Consensus 8 d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV-----------~k~l~~~~~~~~~~~rl~FE~fLpm~q 76 (152)
T KOG0030|consen 8 DQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEV-----------LKVLGQPKRREMNVKRLDFEEFLPMYQ 76 (152)
T ss_pred chHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHH-----------HHHHcCcccchhhhhhhhHHHHHHHHH
Confidence 446889999999999999999999999999999998888883 2333332222 27899999987544
Q ss_pred HH----------HHHHHHHhCCC-CCCceeHHHHHHHHhc
Q psy15785 506 MI----------EVDEMYREAPI-KNGMFDYIEFTRILKH 534 (542)
Q Consensus 506 ~~----------~i~~l~~~~D~-~dG~Is~~EF~~~l~~ 534 (542)
.. ++-+-++.+|+ ++|.|.+.|...+|+.
T Consensus 77 ~vaknk~q~t~edfvegLrvFDkeg~G~i~~aeLRhvLtt 116 (152)
T KOG0030|consen 77 QVAKNKDQGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTT 116 (152)
T ss_pred HHHhccccCcHHHHHHHHHhhcccCCcceeHHHHHHHHHH
Confidence 33 35566788999 9999999999988875
No 68
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=97.80 E-value=6.8e-05 Score=62.86 Aligned_cols=64 Identities=20% Similarity=0.415 Sum_probs=46.1
Q ss_pred HHHHHHHHHhcc-ccCCCCc-ceeHHHHHHHHHHc-----CCCCCHHHHHHHHhc----CCCCcchhhhHHHHhh
Q psy15785 360 AQIQNFKEAFNM-IDQNRDG-FIDKEDLHDMLASL-----GKNPTDDYLEGMMGE----APGPINFTMFLTLFGD 423 (542)
Q Consensus 360 ~ei~~l~~~F~~-~D~d~dG-~Is~~EL~~~L~~l-----g~~~s~~ei~~l~~~----~dG~Idf~EFl~~~~~ 423 (542)
..+..+..+|+. +|.+|+| +|+.+||+.++... +...++.++..+++. ++|.|+|+||+.++..
T Consensus 6 ~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~ 80 (89)
T cd05023 6 RCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGG 80 (89)
T ss_pred HHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 457788999999 7888876 99999999999874 223445566666654 5666666666665543
No 69
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=97.77 E-value=5.2e-05 Score=57.03 Aligned_cols=55 Identities=35% Similarity=0.686 Sum_probs=40.2
Q ss_pred HHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhc----CCCCcchhhhHH
Q psy15785 365 FKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTMFLT 419 (542)
Q Consensus 365 l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~----~dG~Idf~EFl~ 419 (542)
+..+|..+|.+++|.|+.+|+..+++.++..++.+.+..++.. ++|.|++.+|+.
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~ 60 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLE 60 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHH
Confidence 5678999999999999999999999988866666655554443 344555555544
No 70
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=97.74 E-value=7.2e-05 Score=56.20 Aligned_cols=30 Identities=23% Similarity=0.511 Sum_probs=17.2
Q ss_pred CcceeHHHHHHHHHHcCCC-CCHHHHHHHHh
Q psy15785 377 DGFIDKEDLHDMLASLGKN-PTDDYLEGMMG 406 (542)
Q Consensus 377 dG~Is~~EL~~~L~~lg~~-~s~~ei~~l~~ 406 (542)
+|.|+.++|+.+|..+|.. ++..++..++.
T Consensus 2 ~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~ 32 (54)
T PF13833_consen 2 DGKITREEFRRALSKLGIKDLSEEEVDRLFR 32 (54)
T ss_dssp SSEEEHHHHHHHHHHTTSSSSCHHHHHHHHH
T ss_pred cCEECHHHHHHHHHHhCCCCCCHHHHHHHHH
Confidence 5666666666666555655 55554444443
No 71
>KOG0615|consensus
Probab=97.73 E-value=1.6e-05 Score=82.60 Aligned_cols=65 Identities=14% Similarity=0.006 Sum_probs=57.6
Q ss_pred hhhccccccCCCCCCccccc--------ccccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhhcc
Q psy15785 258 SINLDSDLLDTPDFYWERDD--------LENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCYSI 322 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--------le~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~~ 322 (542)
.++||+.|+|+|||-.+... -++|-|....|..||+++.+|++.||.. |+++.+||+|||++.++
T Consensus 368 GcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 368 GCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP 444 (475)
T ss_pred cceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence 56899999999999988765 3788889999999999999999877776 99999999999998654
No 72
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.73 E-value=3.8e-05 Score=51.07 Aligned_cols=30 Identities=43% Similarity=0.790 Sum_probs=26.6
Q ss_pred HHHHHHhhhCCCCCCcccHHHHHHHHH-HcC
Q psy15785 433 VIKNAFGCFDEDNSGIINEERLRELLT-SMG 462 (542)
Q Consensus 433 ~l~~aF~~~D~d~~G~Is~eEL~~~L~-~~g 462 (542)
+++.+|+.+|.|++|+|+.+||+.+|. ++|
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~~lG 31 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRKSLG 31 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHHHTT
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHHhcC
Confidence 478999999999999999999999998 666
No 73
>KOG0751|consensus
Probab=97.73 E-value=0.00023 Score=75.01 Aligned_cols=164 Identities=17% Similarity=0.277 Sum_probs=112.6
Q ss_pred HHHHHhccccCCCCcceeHHHHHHHHHHcC------CCCCHHHHHHHHhc-CCCCcchhhhHHHHhhhcCCCCcHHHHHH
Q psy15785 364 NFKEAFNMIDQNRDGFIDKEDLHDMLASLG------KNPTDDYLEGMMGE-APGPINFTMFLTLFGDRLQGTDPEDVIKN 436 (542)
Q Consensus 364 ~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg------~~~s~~ei~~l~~~-~dG~Idf~EFl~~~~~~~~~~~~~~~l~~ 436 (542)
....+|+.||+.++|.++.+++..++.+.. ++.+.+-+...+.+ ....++|.+|..++.... .+.-.+
T Consensus 109 l~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg~~~~r~~ny~~f~Q~lh~~~-----~E~~~q 183 (694)
T KOG0751|consen 109 LFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFGDIRKRHLNYAEFTQFLHEFQ-----LEHAEQ 183 (694)
T ss_pred HHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHHHhhhHHHHhccHHHHHHHHHHHH-----HHHHHH
Confidence 457889999999999999999999998753 34555566666655 456799999999998764 667899
Q ss_pred HHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHH-----------------------HhhhhhhhhhhHhhhhhc--cccc
Q psy15785 437 AFGCFDEDNSGIINEERLRELLTSMGDRFTDED-----------------------VMNEKLNHCLELVDLLSS--HLSD 491 (542)
Q Consensus 437 aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e-----------------------~~~~~~~~~~~~~~~~~~--~~~~ 491 (542)
+|+..|+.++|+||.-+++.++.....++.... ++|..|+.+..+-+-+.. ...+
T Consensus 184 afr~~d~~~ng~is~Ldfq~imvt~~~h~lt~~v~~nlv~vagg~~~H~vSf~yf~afnslL~~melirk~y~s~~~~~~ 263 (694)
T KOG0751|consen 184 AFREKDKAKNGFISVLDFQDIMVTIRIHLLTPFVEENLVSVAGGNDSHQVSFSYFNAFNSLLNNMELIRKIYSSLAGTRK 263 (694)
T ss_pred HHHHhcccCCCeeeeechHhhhhhhhhhcCCHHHhhhhhhhcCCCCccccchHHHHHHHHHHhhHHHHHHHHHHhccccc
Confidence 999999999999999999998876543333222 122333333222222111 2234
Q ss_pred ccchhHHHHHHHHHHH------HHHHHHHhCCC--CCCceeHHHHHHHH
Q psy15785 492 KHHIRLEWMIIVLIMI------EVDEMYREAPI--KNGMFDYIEFTRIL 532 (542)
Q Consensus 492 ~~~~~~~~Fv~~~~~~------~i~~l~~~~D~--~dG~Is~~EF~~~l 532 (542)
+..+++++|..+.... +++.+|+..|. ..|.+++.++.++.
T Consensus 264 d~~~~kdq~~~~a~~~~q~t~~~idilf~la~~~~~~~~ltl~Di~~I~ 312 (694)
T KOG0751|consen 264 DVEVTKDQFSLAAQTSKQVTPLEIDILFQLADLYHPMGRLTLADIERIA 312 (694)
T ss_pred chhhhHHHHHHHHHHhhccCchhhhhhhhhhhcccccccccHHHHHhhC
Confidence 5567777777665554 36777777766 55667777776654
No 74
>KOG0041|consensus
Probab=97.70 E-value=9.1e-05 Score=69.65 Aligned_cols=68 Identities=24% Similarity=0.412 Sum_probs=58.3
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHH
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVD 510 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~ 510 (542)
...+..+|+.||.|.||+|+..||+.+|..+|.+-+--- +.
T Consensus 98 Ik~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~---------------------------------------lK 138 (244)
T KOG0041|consen 98 IKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLG---------------------------------------LK 138 (244)
T ss_pred HHHHHHHHHHhcccccccccHHHHHHHHHHhCCchhhHH---------------------------------------HH
Confidence 556889999999999999999999999999986544333 88
Q ss_pred HHHHhCCC-CCCceeHHHHHHHHhcCCC
Q psy15785 511 EMYREAPI-KNGMFDYIEFTRILKHGAK 537 (542)
Q Consensus 511 ~l~~~~D~-~dG~Is~~EF~~~l~~~~~ 537 (542)
.|+.++|- .||+|+|-||+-+.+....
T Consensus 139 ~mikeVded~dgklSfreflLIfrkaaa 166 (244)
T KOG0041|consen 139 NMIKEVDEDFDGKLSFREFLLIFRKAAA 166 (244)
T ss_pred HHHHHhhcccccchhHHHHHHHHHHHhc
Confidence 99999999 9999999999988876543
No 75
>PF14658 EF-hand_9: EF-hand domain
Probab=97.68 E-value=9.8e-05 Score=57.76 Aligned_cols=57 Identities=28% Similarity=0.576 Sum_probs=51.1
Q ss_pred HHhccccCCCCcceeHHHHHHHHHHcCC-CCCHHHHHHHHhc----C-CCCcchhhhHHHHhh
Q psy15785 367 EAFNMIDQNRDGFIDKEDLHDMLASLGK-NPTDDYLEGMMGE----A-PGPINFTMFLTLFGD 423 (542)
Q Consensus 367 ~~F~~~D~d~dG~Is~~EL~~~L~~lg~-~~s~~ei~~l~~~----~-dG~Idf~EFl~~~~~ 423 (542)
.+|..||+++.|.|...++...|+.+|. .|++.+++.+.+. + +|.|+|+.|+.+|..
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 3699999999999999999999999998 9999999998886 3 488999999998865
No 76
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.64 E-value=5.2e-05 Score=49.70 Aligned_cols=29 Identities=41% Similarity=0.708 Sum_probs=26.6
Q ss_pred HHHHHhccccCCCCcceeHHHHHHHHHHc
Q psy15785 364 NFKEAFNMIDQNRDGFIDKEDLHDMLASL 392 (542)
Q Consensus 364 ~l~~~F~~~D~d~dG~Is~~EL~~~L~~l 392 (542)
+++++|+.+|+|+||.|+.+||..++++|
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHT
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHhC
Confidence 47899999999999999999999999864
No 77
>KOG2643|consensus
Probab=97.60 E-value=0.00012 Score=76.20 Aligned_cols=119 Identities=18% Similarity=0.312 Sum_probs=85.9
Q ss_pred CCCCcchhhhHHHHhhhcCCCCcHHHHHHHHhhhCCCCCCcccHHHHHHHHHHc------CC----CCCHHHHhhhhhhh
Q psy15785 408 APGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSM------GD----RFTDEDVMNEKLNH 477 (542)
Q Consensus 408 ~dG~Idf~EFl~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~------g~----~ls~~e~~~~~~~~ 477 (542)
.+|-|+|.|++-++.-+.. ++..++-||++||.||+|.|+.+||..+.+-+ |. .++... .+
T Consensus 212 ~~GLIsfSdYiFLlTlLS~---p~~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~------s~ 282 (489)
T KOG2643|consen 212 ESGLISFSDYIFLLTLLSI---PERNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGN------SF 282 (489)
T ss_pred CCCeeeHHHHHHHHHHHcc---CcccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccc------ee
Confidence 4799999998877765432 35678899999999999999999999887432 21 111111 11
Q ss_pred hhhHhhhhhccc---ccccchhHHHHHHHHHHHH---HHHHHHhCCC-CCCceeHHHHHHHHhcC
Q psy15785 478 CLELVDLLSSHL---SDKHHIRLEWMIIVLIMIE---VDEMYREAPI-KNGMFDYIEFTRILKHG 535 (542)
Q Consensus 478 ~~~~~~~~~~~~---~~~~~~~~~~Fv~~~~~~~---i~~l~~~~D~-~dG~Is~~EF~~~l~~~ 535 (542)
-.....++..++ ++++.+++++|....-.++ .+.-|..+|+ ..|.|+-.+|..+|...
T Consensus 283 ~~~~nsaL~~yFFG~rg~~kLs~deF~~F~e~Lq~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~ 347 (489)
T KOG2643|consen 283 KVEVNSALLTYFFGKRGNGKLSIDEFLKFQENLQEEILELEFERFDKGDSGAISEVDFAELLLAY 347 (489)
T ss_pred hhhhhhhHHHHhhccCCCccccHHHHHHHHHHHHHHHHHHHHHHhCcccccccCHHHHHHHHHHH
Confidence 112233344433 4678999999999888886 6667899999 77999999999988754
No 78
>KOG0599|consensus
Probab=97.56 E-value=1.8e-05 Score=78.32 Aligned_cols=64 Identities=13% Similarity=0.131 Sum_probs=54.4
Q ss_pred hhhhccccccCCCCCCccccc-------ccccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 257 HSINLDSDLLDTPDFYWERDD-------LENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 257 ~~v~l~~~Lld~P~f~w~~~~-------le~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
-.|++|.+|.|.||||-...- -+.+-|....|.+||..+|+|++++|.. |+|+.++|.|||+..
T Consensus 214 ~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q 288 (411)
T KOG0599|consen 214 CGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ 288 (411)
T ss_pred HHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence 368899999999998544332 3899999999999999999999776665 999999999999854
No 79
>KOG0034|consensus
Probab=97.52 E-value=0.00051 Score=65.49 Aligned_cols=95 Identities=18% Similarity=0.272 Sum_probs=58.6
Q ss_pred HHHhccccCCCCcc-eeHHHHHHHHHHcCCCCCHH-HHHHHHhc----CCCCcchhhhHHHHhhhcCCCCc------HHH
Q psy15785 366 KEAFNMIDQNRDGF-IDKEDLHDMLASLGKNPTDD-YLEGMMGE----APGPINFTMFLTLFGDRLQGTDP------EDV 433 (542)
Q Consensus 366 ~~~F~~~D~d~dG~-Is~~EL~~~L~~lg~~~s~~-ei~~l~~~----~dG~Idf~EFl~~~~~~~~~~~~------~~~ 433 (542)
.++++.+|++++|. |+.++|..++......-+.. .+.-.++- ++|.|+.+|+..++......... .+-
T Consensus 69 ~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i 148 (187)
T KOG0034|consen 69 DRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDI 148 (187)
T ss_pred HHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHH
Confidence 44555566666665 66666666665544333332 22222221 56666666666666554433222 234
Q ss_pred HHHHHhhhCCCCCCcccHHHHHHHHHH
Q psy15785 434 IKNAFGCFDEDNSGIINEERLRELLTS 460 (542)
Q Consensus 434 l~~aF~~~D~d~~G~Is~eEL~~~L~~ 460 (542)
+...|..+|.|++|.||.+|+..++..
T Consensus 149 ~d~t~~e~D~d~DG~IsfeEf~~~v~~ 175 (187)
T KOG0034|consen 149 VDKTFEEADTDGDGKISFEEFCKVVEK 175 (187)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 567899999999999999999999864
No 80
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.46 E-value=0.00012 Score=48.52 Aligned_cols=30 Identities=53% Similarity=0.938 Sum_probs=26.7
Q ss_pred HHHHHhccccCCCCcceeHHHHHHHHH-HcC
Q psy15785 364 NFKEAFNMIDQNRDGFIDKEDLHDMLA-SLG 393 (542)
Q Consensus 364 ~l~~~F~~~D~d~dG~Is~~EL~~~L~-~lg 393 (542)
+++.+|+.+|.|++|.|+.+||..+|+ ++|
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~~lG 31 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRKSLG 31 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHHHTT
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHHhcC
Confidence 478999999999999999999999999 576
No 81
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.44 E-value=0.00054 Score=57.36 Aligned_cols=64 Identities=14% Similarity=0.326 Sum_probs=51.3
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHH-c----CCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHH
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTS-M----GDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLI 505 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~-~----g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~ 505 (542)
...+..+|..|- .+.|.++..||+.++.. + +..-+++.
T Consensus 7 i~~lI~~FhkYa-G~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~------------------------------------ 49 (91)
T cd05024 7 MEKMMLTFHKFA-GEKNYLNRDDLQKLMEKEFSEFLKNQNDPMA------------------------------------ 49 (91)
T ss_pred HHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhHHHHcCCCCHHH------------------------------------
Confidence 456788999998 44679999999999965 2 33334444
Q ss_pred HHHHHHHHHhCCC-CCCceeHHHHHHHHhc
Q psy15785 506 MIEVDEMYREAPI-KNGMFDYIEFTRILKH 534 (542)
Q Consensus 506 ~~~i~~l~~~~D~-~dG~Is~~EF~~~l~~ 534 (542)
++++|+..|. +||.|+|.||+.++..
T Consensus 50 ---vd~im~~LD~n~Dg~vdF~EF~~Lv~~ 76 (91)
T cd05024 50 ---VDKIMKDLDDCRDGKVGFQSFFSLIAG 76 (91)
T ss_pred ---HHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 9999999999 9999999999998764
No 82
>KOG0607|consensus
Probab=97.42 E-value=4.2e-05 Score=77.18 Aligned_cols=63 Identities=17% Similarity=0.153 Sum_probs=54.8
Q ss_pred hhhccccccCCCCCCcc--------ccc--------------ccccccccccccccchhhhhhhhHhhhc----ccchhh
Q psy15785 258 SINLDSDLLDTPDFYWE--------RDD--------------LENLYLQTCNYFSISRRTKMISRIYICR----RVTTSA 311 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~--------~~~--------------le~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~ 311 (542)
.|+||++|+|+|||.+. .-+ -+.+.|.-.+|-.||..+++|+++++.+ |++|.+
T Consensus 278 GvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~ 357 (463)
T KOG0607|consen 278 GVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQ 357 (463)
T ss_pred HHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhh
Confidence 68999999999999863 322 2568889999999999999999888877 999999
Q ss_pred hhhhhhhhh
Q psy15785 312 SRDEQSVCY 320 (542)
Q Consensus 312 ~l~h~w~~~ 320 (542)
.++|||+..
T Consensus 358 vlnhPw~~~ 366 (463)
T KOG0607|consen 358 VLNHPWVQR 366 (463)
T ss_pred ccCCccccc
Confidence 999999975
No 83
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=97.36 E-value=0.00039 Score=58.10 Aligned_cols=63 Identities=14% Similarity=0.302 Sum_probs=42.8
Q ss_pred HHHHHHHHHhccccCC--CCcceeHHHHHHHHH-HcCCCCC----HHHHHHHHhc----CCCCcchhhhHHHHh
Q psy15785 360 AQIQNFKEAFNMIDQN--RDGFIDKEDLHDMLA-SLGKNPT----DDYLEGMMGE----APGPINFTMFLTLFG 422 (542)
Q Consensus 360 ~ei~~l~~~F~~~D~d--~dG~Is~~EL~~~L~-~lg~~~s----~~ei~~l~~~----~dG~Idf~EFl~~~~ 422 (542)
+-+..+..+|+.++.. ++|.|+.+||+.+|. .+|..++ ..++..++.. ++|.|+|+||+.++.
T Consensus 5 ~~i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~ 78 (88)
T cd05030 5 KAIETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVI 78 (88)
T ss_pred HHHHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHH
Confidence 4467788999999966 489999999999997 4454444 5555555553 345555555555544
No 84
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=97.36 E-value=0.00042 Score=60.99 Aligned_cols=64 Identities=27% Similarity=0.316 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhcCCCCcchhhhHHHHhhhcCCCCcHHHHHHH
Q psy15785 358 DQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGPINFTMFLTLFGDRLQGTDPEDVIKNA 437 (542)
Q Consensus 358 s~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~~dG~Idf~EFl~~~~~~~~~~~~~~~l~~a 437 (542)
.+.....+.-.|..+|.|+||.|+.+||..+. ++ +. ...+...
T Consensus 43 ~~~~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l~--~~---------------------------------e~~~~~f 85 (116)
T cd00252 43 YPMCKDPVGWMFNQLDGNYDGKLSHHELAPIR--LD--PN---------------------------------EHCIKPF 85 (116)
T ss_pred hHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHH--cc--ch---------------------------------HHHHHHH
Confidence 56678889999999999999999999999654 11 11 3345667
Q ss_pred HhhhCCCCCCcccHHHHHHHH
Q psy15785 438 FGCFDEDNSGIINEERLRELL 458 (542)
Q Consensus 438 F~~~D~d~~G~Is~eEL~~~L 458 (542)
|+.+|.|++|.||.+|+...+
T Consensus 86 ~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 86 FESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred HHHHCCCCCCCCCHHHHHHHH
Confidence 778888888888888888877
No 85
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.19 E-value=0.0004 Score=43.80 Aligned_cols=25 Identities=40% Similarity=0.675 Sum_probs=22.5
Q ss_pred HHHHHhhhCCCCCCcccHHHHHHHH
Q psy15785 434 IKNAFGCFDEDNSGIINEERLRELL 458 (542)
Q Consensus 434 l~~aF~~~D~d~~G~Is~eEL~~~L 458 (542)
++.+|+.+|.|++|.||.+|+++++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 4679999999999999999999864
No 86
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=96.81 E-value=0.0011 Score=41.78 Aligned_cols=25 Identities=32% Similarity=0.626 Sum_probs=22.3
Q ss_pred HHHHhccccCCCCcceeHHHHHHHH
Q psy15785 365 FKEAFNMIDQNRDGFIDKEDLHDML 389 (542)
Q Consensus 365 l~~~F~~~D~d~dG~Is~~EL~~~L 389 (542)
++++|+.+|.|+||.|+.+|+..++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 4678999999999999999998754
No 87
>KOG0036|consensus
Probab=96.80 E-value=0.0079 Score=62.72 Aligned_cols=95 Identities=16% Similarity=0.201 Sum_probs=73.8
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHH--
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIE-- 508 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~-- 508 (542)
+..++..|+.||.+++|.++..++.+.+..++.+-++.++++.++. .+ ..++++.++|.+|...+...+
T Consensus 13 ~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~----~~-----d~~~dg~vDy~eF~~Y~~~~E~~ 83 (463)
T KOG0036|consen 13 DIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFS----AM-----DANRDGRVDYSEFKRYLDNKELE 83 (463)
T ss_pred HHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHH----hc-----ccCcCCcccHHHHHHHHHHhHHH
Confidence 4568889999999999999999999999998877444442221111 11 335789999999999777775
Q ss_pred HHHHHHhCCC-CCCceeHHHHHHHHhc
Q psy15785 509 VDEMYREAPI-KNGMFDYIEFTRILKH 534 (542)
Q Consensus 509 i~~l~~~~D~-~dG~Is~~EF~~~l~~ 534 (542)
+-.+|+..|. .||.|+-+|.-+.++.
T Consensus 84 l~~~F~~iD~~hdG~i~~~Ei~~~l~~ 110 (463)
T KOG0036|consen 84 LYRIFQSIDLEHDGKIDPNEIWRYLKD 110 (463)
T ss_pred HHHHHhhhccccCCccCHHHHHHHHHH
Confidence 8899999999 9999999988777664
No 88
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=96.74 E-value=0.004 Score=66.08 Aligned_cols=55 Identities=18% Similarity=0.263 Sum_probs=47.1
Q ss_pred CCcHHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHH
Q psy15785 428 TDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMI 507 (542)
Q Consensus 428 ~~~~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~ 507 (542)
......+..+|+.+|.|++|.|+.+||..
T Consensus 330 ~~~~~~l~~aF~~~D~dgdG~Is~~E~~~--------------------------------------------------- 358 (391)
T PRK12309 330 EAFTHAAQEIFRLYDLDGDGFITREEWLG--------------------------------------------------- 358 (391)
T ss_pred ChhhHHHHHHHHHhCCCCCCcCcHHHHHH---------------------------------------------------
Confidence 33467789999999999999999999831
Q ss_pred HHHHHHHhCCC-CCCceeHHHHHHHHhc
Q psy15785 508 EVDEMYREAPI-KNGMFDYIEFTRILKH 534 (542)
Q Consensus 508 ~i~~l~~~~D~-~dG~Is~~EF~~~l~~ 534 (542)
++.+|+.+|. +||.|+++||...+..
T Consensus 359 -~~~~F~~~D~d~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 359 -SDAVFDALDLNHDGKITPEEMRAGLGA 385 (391)
T ss_pred -HHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 3468999999 9999999999998865
No 89
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=96.59 E-value=0.0078 Score=51.92 Aligned_cols=61 Identities=21% Similarity=0.468 Sum_probs=52.7
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHH
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVD 510 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~ 510 (542)
.......|...|. ++|.|+.++.+.+|...| ++.+. +.
T Consensus 9 ~~~y~~~F~~l~~-~~g~isg~~a~~~f~~S~--L~~~~---------------------------------------L~ 46 (104)
T PF12763_consen 9 KQKYDQIFQSLDP-QDGKISGDQAREFFMKSG--LPRDV---------------------------------------LA 46 (104)
T ss_dssp HHHHHHHHHCTSS-STTEEEHHHHHHHHHHTT--SSHHH---------------------------------------HH
T ss_pred HHHHHHHHHhcCC-CCCeEeHHHHHHHHHHcC--CCHHH---------------------------------------HH
Confidence 5678899999995 689999999999998755 78777 89
Q ss_pred HHHHhCCC-CCCceeHHHHHHHHh
Q psy15785 511 EMYREAPI-KNGMFDYIEFTRILK 533 (542)
Q Consensus 511 ~l~~~~D~-~dG~Is~~EF~~~l~ 533 (542)
.|+..+|. ++|.++++||+-.|.
T Consensus 47 ~IW~LaD~~~dG~L~~~EF~iAm~ 70 (104)
T PF12763_consen 47 QIWNLADIDNDGKLDFEEFAIAMH 70 (104)
T ss_dssp HHHHHH-SSSSSEEEHHHHHHHHH
T ss_pred HHHhhhcCCCCCcCCHHHHHHHHH
Confidence 99999999 999999999988664
No 90
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=96.44 E-value=0.0086 Score=51.65 Aligned_cols=67 Identities=21% Similarity=0.400 Sum_probs=48.4
Q ss_pred hCCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhcCCCCcchhhhHHHHhhhcCCCCcHHHHH
Q psy15785 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGPINFTMFLTLFGDRLQGTDPEDVIK 435 (542)
Q Consensus 356 ~ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~~dG~Idf~EFl~~~~~~~~~~~~~~~l~ 435 (542)
.+++++.+.+..+|..+|. ++|.|+.++.+.++.+.|. + .+.|.
T Consensus 3 ~ls~~e~~~y~~~F~~l~~-~~g~isg~~a~~~f~~S~L--~---------------------------------~~~L~ 46 (104)
T PF12763_consen 3 KLSPEEKQKYDQIFQSLDP-QDGKISGDQAREFFMKSGL--P---------------------------------RDVLA 46 (104)
T ss_dssp --SCCHHHHHHHHHHCTSS-STTEEEHHHHHHHHHHTTS--S---------------------------------HHHHH
T ss_pred CCCHHHHHHHHHHHHhcCC-CCCeEeHHHHHHHHHHcCC--C---------------------------------HHHHH
Confidence 4788899999999999985 6899999999998876552 2 44556
Q ss_pred HHHhhhCCCCCCcccHHHHHHHH
Q psy15785 436 NAFGCFDEDNSGIINEERLRELL 458 (542)
Q Consensus 436 ~aF~~~D~d~~G~Is~eEL~~~L 458 (542)
.++..-|.|++|+++.+||.-++
T Consensus 47 ~IW~LaD~~~dG~L~~~EF~iAm 69 (104)
T PF12763_consen 47 QIWNLADIDNDGKLDFEEFAIAM 69 (104)
T ss_dssp HHHHHH-SSSSSEEEHHHHHHHH
T ss_pred HHHhhhcCCCCCcCCHHHHHHHH
Confidence 66666666666666666665554
No 91
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=96.39 E-value=0.0072 Score=44.77 Aligned_cols=46 Identities=22% Similarity=0.396 Sum_probs=37.6
Q ss_pred ccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHHHHHHhCCC-CCCceeHHH
Q psy15785 449 INEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYREAPI-KNGMFDYIE 527 (542)
Q Consensus 449 Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~~l~~~~D~-~dG~Is~~E 527 (542)
+|..|++.+|+.++..+++.- +..+|+.+|. ++|.++.+|
T Consensus 2 msf~Evk~lLk~~NI~~~~~y---------------------------------------A~~LFq~~D~s~~g~Le~~E 42 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNIEMDDEY---------------------------------------ARQLFQECDKSQSGRLEGEE 42 (51)
T ss_dssp BEHHHHHHHHHHTT----HHH---------------------------------------HHHHHHHH-SSSSSEBEHHH
T ss_pred CCHHHHHHHHHHHccCcCHHH---------------------------------------HHHHHHHhcccCCCCccHHH
Confidence 688999999999999999888 9999999999 999999999
Q ss_pred HHHHHh
Q psy15785 528 FTRILK 533 (542)
Q Consensus 528 F~~~l~ 533 (542)
|..+.+
T Consensus 43 f~~Fy~ 48 (51)
T PF14788_consen 43 FEEFYK 48 (51)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988765
No 92
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=96.31 E-value=0.015 Score=48.68 Aligned_cols=30 Identities=10% Similarity=0.474 Sum_probs=23.5
Q ss_pred HHHHHHHHhccccCCCCcceeHHHHHHHHHH
Q psy15785 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLAS 391 (542)
Q Consensus 361 ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~ 391 (542)
-+..+-.+|..+.. +.|+++..||+.+|.+
T Consensus 6 ai~~lI~~FhkYaG-~~~tLsk~Elk~Ll~~ 35 (91)
T cd05024 6 SMEKMMLTFHKFAG-EKNYLNRDDLQKLMEK 35 (91)
T ss_pred HHHHHHHHHHHHcC-CCCcCCHHHHHHHHHH
Confidence 45667788988884 4569999999999864
No 93
>KOG4666|consensus
Probab=96.18 E-value=0.0034 Score=63.35 Aligned_cols=89 Identities=15% Similarity=0.144 Sum_probs=71.9
Q ss_pred CCCCcchhhhHHHHhhhcCCCCcHHHHHHHHhhhCCCCCCcccHHHHHHHHHHc-CCCCCHHHHhhhhhhhhhhHhhhhh
Q psy15785 408 APGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSM-GDRFTDEDVMNEKLNHCLELVDLLS 486 (542)
Q Consensus 408 ~dG~Idf~EFl~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~-g~~ls~~e~~~~~~~~~~~~~~~~~ 486 (542)
++|.+||.|.+..+.-........+-++-+|++|+.+-||.+...+|.-+|+.. |. .+-.
T Consensus 272 ~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~lgv--~~l~----------------- 332 (412)
T KOG4666|consen 272 TTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQVVLGV--EVLR----------------- 332 (412)
T ss_pred CCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHHhcCc--ceee-----------------
Confidence 688899998888777666666678889999999999999999999999888763 32 2222
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHhCCC-CCCceeHHHHHHHHhcCCC
Q psy15785 487 SHLSDKHHIRLEWMIIVLIMIEVDEMYREAPI-KNGMFDYIEFTRILKHGAK 537 (542)
Q Consensus 487 ~~~~~~~~~~~~~Fv~~~~~~~i~~l~~~~D~-~dG~Is~~EF~~~l~~~~~ 537 (542)
+..+|...+. .+|+|+|.+|.+++...+.
T Consensus 333 ----------------------v~~lf~~i~q~d~~ki~~~~f~~fa~~~p~ 362 (412)
T KOG4666|consen 333 ----------------------VPVLFPSIEQKDDPKIYASNFRKFAATEPN 362 (412)
T ss_pred ----------------------ccccchhhhcccCcceeHHHHHHHHHhCch
Confidence 6678888889 8999999999998876553
No 94
>KOG2562|consensus
Probab=96.17 E-value=0.021 Score=60.45 Aligned_cols=137 Identities=14% Similarity=0.286 Sum_probs=89.8
Q ss_pred HHHHHhccccCCCCcceeHHHHHHHH--HHcCCCCCHHHHHHHHhcCCCCcchhhhHHHHhhhcCCCCcHHHHHHHHhhh
Q psy15785 364 NFKEAFNMIDQNRDGFIDKEDLHDML--ASLGKNPTDDYLEGMMGEAPGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCF 441 (542)
Q Consensus 364 ~l~~~F~~~D~d~dG~Is~~EL~~~L--~~lg~~~s~~ei~~l~~~~dG~Idf~EFl~~~~~~~~~~~~~~~l~~aF~~~ 441 (542)
.++++|-.+++.++|.|+..++.... ..+-. ..+++ .+.......+|+.|..++.. |-.+
T Consensus 226 vi~rIFy~~nrs~tG~iti~el~~snll~~l~~-l~eEe---d~nq~~~~FS~e~f~viy~k--------------FweL 287 (493)
T KOG2562|consen 226 VIQRIFYYLNRSRTGRITIQELLRSNLLDALLE-LDEEE---DINQVTRYFSYEHFYVIYCK--------------FWEL 287 (493)
T ss_pred HhhhhheeeCCccCCceeHHHHHHhHHHHHHHH-HHHHh---hhhhhhhheeHHHHHHHHHH--------------Hhhh
Confidence 35889999999999999999986542 22110 01111 11112344556665555443 6678
Q ss_pred CCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhccc--ccccchhHHHHHHHHHHHH-------HHHH
Q psy15785 442 DEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHL--SDKHHIRLEWMIIVLIMIE-------VDEM 512 (542)
Q Consensus 442 D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Fv~~~~~~~-------i~~l 512 (542)
|+|++|.|+.++|+..-.. .++.-- ++ +++....... ..+|.|+|..|+-..+.++ ++-.
T Consensus 288 D~Dhd~lidk~~L~ry~d~---tlt~~i-----vd---RIFs~v~r~~~~~~eGrmdykdFv~FilA~e~k~t~~SleYw 356 (493)
T KOG2562|consen 288 DTDHDGLIDKEDLKRYGDH---TLTERI-----VD---RIFSQVPRGFTVKVEGRMDYKDFVDFILAEEDKDTPASLEYW 356 (493)
T ss_pred ccccccccCHHHHHHHhcc---chhhHH-----HH---HHHhhccccceeeecCcccHHHHHHHHHHhccCCCccchhhh
Confidence 9999999999999876532 233222 22 3344333323 2567799999999888874 8889
Q ss_pred HHhCCC-CCCceeHHHHH
Q psy15785 513 YREAPI-KNGMFDYIEFT 529 (542)
Q Consensus 513 ~~~~D~-~dG~Is~~EF~ 529 (542)
|+-+|. ++|.++-+|.-
T Consensus 357 FrclDld~~G~Lt~~el~ 374 (493)
T KOG2562|consen 357 FRCLDLDGDGILTLNELR 374 (493)
T ss_pred eeeeeccCCCcccHHHHH
Confidence 999999 99998877643
No 95
>KOG0377|consensus
Probab=96.15 E-value=0.0084 Score=62.76 Aligned_cols=59 Identities=24% Similarity=0.424 Sum_probs=36.0
Q ss_pred HHHHHHhccccCCCCcceeHHHHHHHHHHc----CCCCCHHHHHHHHhc----CCCCcchhhhHHHH
Q psy15785 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL----GKNPTDDYLEGMMGE----APGPINFTMFLTLF 421 (542)
Q Consensus 363 ~~l~~~F~~~D~d~dG~Is~~EL~~~L~~l----g~~~s~~ei~~l~~~----~dG~Idf~EFl~~~ 421 (542)
..+..+|+.+|+|++|.|+.+||+.+.+-+ ...++++++.++.+. +||.||++||+.++
T Consensus 547 s~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAF 613 (631)
T KOG0377|consen 547 SSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAF 613 (631)
T ss_pred hhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHH
Confidence 346667777777777777777777766543 234555555554443 45556655555544
No 96
>KOG0046|consensus
Probab=96.03 E-value=0.015 Score=62.25 Aligned_cols=70 Identities=23% Similarity=0.475 Sum_probs=60.8
Q ss_pred hhCCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCC---CCHHHHHHHHhc----CCCCcchhhhHHHHhhhc
Q psy15785 355 AMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKN---PTDDYLEGMMGE----APGPINFTMFLTLFGDRL 425 (542)
Q Consensus 355 ~~ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~---~s~~ei~~l~~~----~dG~Idf~EFl~~~~~~~ 425 (542)
.++|.+++.+++..|..+| |++|+|+..|+..++.+.+.. ...++++.++.. .+|.|+|++|+.++....
T Consensus 11 ~~~tq~El~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l~ 87 (627)
T KOG0046|consen 11 SQLTQEELRELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNLK 87 (627)
T ss_pred ccccHHHHHHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhhh
Confidence 4799999999999999999 999999999999999987643 357788888886 589999999999887643
No 97
>KOG4251|consensus
Probab=95.99 E-value=0.046 Score=53.31 Aligned_cols=96 Identities=14% Similarity=0.189 Sum_probs=62.2
Q ss_pred HHHHHHhccccCCCCcceeHHHHHHHHHHc-CCCC--------------CHHHHHHHHhc---CCCC---------cchh
Q psy15785 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL-GKNP--------------TDDYLEGMMGE---APGP---------INFT 415 (542)
Q Consensus 363 ~~l~~~F~~~D~d~dG~Is~~EL~~~L~~l-g~~~--------------s~~ei~~l~~~---~dG~---------Idf~ 415 (542)
.+-+.-|+..|+|+||.|+.+|++--+.+. |..- -+++-+.+..+ ..++ ++-.
T Consensus 140 eeSkthFraVDpdgDGhvsWdEykvkFlaskghsekevadairlneelkVDeEtqevlenlkdRwyqaDsppadllltee 219 (362)
T KOG4251|consen 140 EESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEE 219 (362)
T ss_pred hhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHHHHHHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHH
Confidence 344567899999999999999997665443 2110 11122222222 2233 4448
Q ss_pred hhHHHHhhhcCCCCcHHHHHHHHhhhCCCCCCcccHHHHHHHH
Q psy15785 416 MFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELL 458 (542)
Q Consensus 416 EFl~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~Is~eEL~~~L 458 (542)
||+.++........-..-++.+-+.+|+||+..+|..||....
T Consensus 220 EflsFLHPEhSrgmLrfmVkeivrdlDqdgDkqlSvpeFislp 262 (362)
T KOG4251|consen 220 EFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLP 262 (362)
T ss_pred HHHHHcChHhhhhhHHHHHHHHHHHhccCCCeeecchhhhcCC
Confidence 8888876533333335567788999999999999999997643
No 98
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=95.79 E-value=0.033 Score=59.21 Aligned_cols=54 Identities=28% Similarity=0.468 Sum_probs=42.8
Q ss_pred HHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhcCCCCcchhhhHHHHhhhcCCCCcHHHHHHHHhh
Q psy15785 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGPINFTMFLTLFGDRLQGTDPEDVIKNAFGC 440 (542)
Q Consensus 361 ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~~dG~Idf~EFl~~~~~~~~~~~~~~~l~~aF~~ 440 (542)
-...+..+|..+|.|+||.|+.+||.. ...+|+.
T Consensus 332 ~~~~l~~aF~~~D~dgdG~Is~~E~~~----------------------------------------------~~~~F~~ 365 (391)
T PRK12309 332 FTHAAQEIFRLYDLDGDGFITREEWLG----------------------------------------------SDAVFDA 365 (391)
T ss_pred hhHHHHHHHHHhCCCCCCcCcHHHHHH----------------------------------------------HHHHHHH
Confidence 355678888888988888888888721 2456888
Q ss_pred hCCCCCCcccHHHHHHHHHH
Q psy15785 441 FDEDNSGIINEERLRELLTS 460 (542)
Q Consensus 441 ~D~d~~G~Is~eEL~~~L~~ 460 (542)
+|.|++|.|+.+||.+++..
T Consensus 366 ~D~d~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 366 LDLNHDGKITPEEMRAGLGA 385 (391)
T ss_pred hCCCCCCCCcHHHHHHHHHH
Confidence 99999999999999988754
No 99
>KOG4065|consensus
Probab=95.51 E-value=0.03 Score=48.38 Aligned_cols=66 Identities=21% Similarity=0.421 Sum_probs=49.3
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHc------CC---CCC-HHHHhhhhhhhhhhHhhhhhcccccccchhHHHH
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSM------GD---RFT-DEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWM 500 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~------g~---~ls-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F 500 (542)
++.-...|++.|.|++|+|+.-|+..++... |. +++ +.+ ++.+
T Consensus 66 eqlqfHYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~E-----le~~---------------------- 118 (144)
T KOG4065|consen 66 EQLQFHYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAE-----LERL---------------------- 118 (144)
T ss_pred HHHhhhhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHH-----HHHH----------------------
Confidence 3334568999999999999999999998764 22 233 333 1111
Q ss_pred HHHHHHHHHHHHHHhCCC-CCCceeHHHHHHH
Q psy15785 501 IIVLIMIEVDEMYREAPI-KNGMFDYIEFTRI 531 (542)
Q Consensus 501 v~~~~~~~i~~l~~~~D~-~dG~Is~~EF~~~ 531 (542)
++.+++.-|. +||.|+|-||++-
T Consensus 119 --------iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 119 --------IDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred --------HHHHhcccccCCCceeeHHHHHhh
Confidence 7788888899 9999999999864
No 100
>KOG0040|consensus
Probab=95.48 E-value=0.029 Score=66.28 Aligned_cols=73 Identities=14% Similarity=0.288 Sum_probs=52.6
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHH
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVD 510 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~ 510 (542)
..++..+|+.||++.+|.++..+|+.+|+++|+.++--+ + ..+.. .++
T Consensus 2252 L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvE------e------------~~~~p--------------~fe 2299 (2399)
T KOG0040|consen 2252 LKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVE------E------------GEPEP--------------EFE 2299 (2399)
T ss_pred HHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccc------c------------CCCCh--------------hHH
Confidence 345677999999999999999999999999998774322 0 00000 166
Q ss_pred HHHHhCCC-CCCceeHHHHHHHHhcC
Q psy15785 511 EMYREAPI-KNGMFDYIEFTRILKHG 535 (542)
Q Consensus 511 ~l~~~~D~-~dG~Is~~EF~~~l~~~ 535 (542)
+++..+|+ .+|.|+..+|+++|...
T Consensus 2300 ~~ld~vDP~r~G~Vsl~dY~afmi~~ 2325 (2399)
T KOG0040|consen 2300 EILDLVDPNRDGYVSLQDYMAFMISK 2325 (2399)
T ss_pred HHHHhcCCCCcCcccHHHHHHHHHhc
Confidence 67777777 77777777777776644
No 101
>KOG4251|consensus
Probab=95.40 E-value=0.2 Score=48.97 Aligned_cols=30 Identities=17% Similarity=0.308 Sum_probs=26.1
Q ss_pred HHHHHHHhccccCCCCcceeHHHHHHHHHH
Q psy15785 362 IQNFKEAFNMIDQNRDGFIDKEDLHDMLAS 391 (542)
Q Consensus 362 i~~l~~~F~~~D~d~dG~Is~~EL~~~L~~ 391 (542)
...+..+|.+.|.|.||+|+..|++..+..
T Consensus 100 rrklmviFsKvDVNtDrkisAkEmqrwIme 129 (362)
T KOG4251|consen 100 RRKLMVIFSKVDVNTDRKISAKEMQRWIME 129 (362)
T ss_pred HHHHHHHHhhcccCccccccHHHHHHHHHH
Confidence 456889999999999999999999887653
No 102
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=95.30 E-value=0.0093 Score=52.26 Aligned_cols=59 Identities=20% Similarity=0.517 Sum_probs=42.3
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHH
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVD 510 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~ 510 (542)
...+...|..+|.|++|.++..|++.+...+ .+.+ +| +.
T Consensus 53 ~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l----~~~e-------~C------------------------------~~ 91 (113)
T PF10591_consen 53 KRVVHWKFCQLDRNKDGVLDRSELKPLRRPL----MPPE-------HC------------------------------AR 91 (113)
T ss_dssp HHHHHHHHHHH--T-SSEE-TTTTGGGGSTT----STTG-------GG------------------------------HH
T ss_pred hhhhhhhHhhhcCCCCCccCHHHHHHHHHHH----hhhH-------HH------------------------------HH
Confidence 5678888999999999999999998876433 2111 23 88
Q ss_pred HHHHhCCC-CCCceeHHHHHH
Q psy15785 511 EMYREAPI-KNGMFDYIEFTR 530 (542)
Q Consensus 511 ~l~~~~D~-~dG~Is~~EF~~ 530 (542)
..++.+|. +||.||..||..
T Consensus 92 ~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 92 PFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp HHHHHH-TT-SSSEEHHHHHH
T ss_pred HHHHHcCCCCCCCCCHHHHcc
Confidence 89999999 999999999975
No 103
>KOG0169|consensus
Probab=95.15 E-value=0.17 Score=56.83 Aligned_cols=108 Identities=13% Similarity=0.223 Sum_probs=84.8
Q ss_pred CCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhc----CCCCcchhhhHHHHhhhcCCCCcHH
Q psy15785 357 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTMFLTLFGDRLQGTDPED 432 (542)
Q Consensus 357 ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~----~dG~Idf~EFl~~~~~~~~~~~~~~ 432 (542)
........+..+|+..|++++|.++..+...+++.+...+....+..+++. +++++...+|......... ..
T Consensus 130 ~~~~~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~----rp 205 (746)
T KOG0169|consen 130 QRSRREHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTK----RP 205 (746)
T ss_pred hcchHHHHHHHHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhcc----Cc
Confidence 344556678899999999999999999999999998887777776666664 7899999999998775332 22
Q ss_pred HHHHHHhhhCCCCCCcccHHHHHHHHHHcC-C-CCCHHH
Q psy15785 433 VIKNAFGCFDEDNSGIINEERLRELLTSMG-D-RFTDED 469 (542)
Q Consensus 433 ~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g-~-~ls~~e 469 (542)
.+...|..+-.+ .++++.++|..+|...+ . ..+.+.
T Consensus 206 ev~~~f~~~s~~-~~~ls~~~L~~Fl~~~q~e~~~~~~~ 243 (746)
T KOG0169|consen 206 EVYFLFVQYSHG-KEYLSTDDLLRFLEEEQGEDGATLDE 243 (746)
T ss_pred hHHHHHHHHhCC-CCccCHHHHHHHHHHhcccccccHHH
Confidence 788888888644 89999999999998863 2 344444
No 104
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=94.93 E-value=0.03 Score=34.59 Aligned_cols=27 Identities=41% Similarity=0.737 Sum_probs=24.5
Q ss_pred HHHHHhhhCCCCCCcccHHHHHHHHHH
Q psy15785 434 IKNAFGCFDEDNSGIINEERLRELLTS 460 (542)
Q Consensus 434 l~~aF~~~D~d~~G~Is~eEL~~~L~~ 460 (542)
++.+|+.+|.+++|.|+..+|..++..
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 578999999999999999999998864
No 105
>KOG0046|consensus
Probab=94.53 E-value=0.084 Score=56.74 Aligned_cols=65 Identities=20% Similarity=0.349 Sum_probs=53.6
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCC---CHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHH
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRF---TDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMI 507 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~l---s~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~ 507 (542)
...++..|...| |++|+|+..++..++...+... ..++
T Consensus 18 l~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~ee-------------------------------------- 58 (627)
T KOG0046|consen 18 LRELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREE-------------------------------------- 58 (627)
T ss_pred HHHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHH--------------------------------------
Confidence 346788999999 9999999999999999876543 3445
Q ss_pred HHHHHHHhCCC-CCCceeHHHHHHHHhcC
Q psy15785 508 EVDEMYREAPI-KNGMFDYIEFTRILKHG 535 (542)
Q Consensus 508 ~i~~l~~~~D~-~dG~Is~~EF~~~l~~~ 535 (542)
+++++...+. .+|.|+|++|+.++.+-
T Consensus 59 -i~~~l~~~~~~~~g~v~fe~f~~~~~~l 86 (627)
T KOG0046|consen 59 -IKEILGEVGVDADGRVEFEEFVGIFLNL 86 (627)
T ss_pred -HHHHHhccCCCcCCccCHHHHHHHHHhh
Confidence 8888999999 99999999999866543
No 106
>KOG1707|consensus
Probab=94.49 E-value=0.22 Score=54.68 Aligned_cols=107 Identities=20% Similarity=0.329 Sum_probs=77.4
Q ss_pred hCCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHH-cCCCCCHHHHHHHHhc---------CCCCcchhhhHHHHhhhc
Q psy15785 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLAS-LGKNPTDDYLEGMMGE---------APGPINFTMFLTLFGDRL 425 (542)
Q Consensus 356 ~ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~-lg~~~s~~ei~~l~~~---------~dG~Idf~EFl~~~~~~~ 425 (542)
.+.+.-++.+.++|...|.|.||.++-.|+...=+. ++.+++..++..+... .++.++..-|+.+...+.
T Consensus 188 elkp~~v~al~RIFki~D~d~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL~~lfi 267 (625)
T KOG1707|consen 188 ELKPRCVKALKRIFKISDSDNDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFLNTLFI 267 (625)
T ss_pred cccHHHHHHHHHHHhhhccccccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHHHHHHHH
Confidence 467777888999999999999999999999766443 5667766665554432 244566666665542211
Q ss_pred CC-----------------------------------------CCcHHHHHHHHhhhCCCCCCcccHHHHHHHHHHcC
Q psy15785 426 QG-----------------------------------------TDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMG 462 (542)
Q Consensus 426 ~~-----------------------------------------~~~~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g 462 (542)
.. ....+.+...|..||.|+||.++..|+..++...+
T Consensus 268 ergr~EttW~iLR~fgY~DsleL~~~~l~p~~~~~p~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P 345 (625)
T KOG1707|consen 268 ERGRHETTWTILRKFGYTDSLELTDEYLPPRLKVPPDQSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTAP 345 (625)
T ss_pred HhccccchhhhhhhcCCcchhhhhhhhcCccccCCCCcceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhCC
Confidence 00 00135688899999999999999999999998864
No 107
>KOG0038|consensus
Probab=94.44 E-value=0.12 Score=46.55 Aligned_cols=71 Identities=27% Similarity=0.431 Sum_probs=46.3
Q ss_pred hhHHhhCCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcC-CCCCHHHHHHHHhc--------CCCCcchhhhHHHH
Q psy15785 351 SNVFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLG-KNPTDDYLEGMMGE--------APGPINFTMFLTLF 421 (542)
Q Consensus 351 ~~~~~~ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg-~~~s~~ei~~l~~~--------~dG~Idf~EFl~~~ 421 (542)
..+++.+.+.+++. .-+|+.+|-|+|+.|...+|...+.++. ..++.+++..+..+ ++|+++|.||-.++
T Consensus 97 fSV~sE~APrdlK~-~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i 175 (189)
T KOG0038|consen 97 FSVFSEMAPRDLKA-KYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEEADLDGDGKLSFAEFEHVI 175 (189)
T ss_pred HHHHHhhChHHhhh-hheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHH
Confidence 33445555555543 4568899999999999999999998874 45666666544332 45555555555544
Q ss_pred h
Q psy15785 422 G 422 (542)
Q Consensus 422 ~ 422 (542)
.
T Consensus 176 ~ 176 (189)
T KOG0038|consen 176 L 176 (189)
T ss_pred H
Confidence 4
No 108
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=94.18 E-value=0.043 Score=33.88 Aligned_cols=27 Identities=44% Similarity=0.792 Sum_probs=24.3
Q ss_pred HHHHhccccCCCCcceeHHHHHHHHHH
Q psy15785 365 FKEAFNMIDQNRDGFIDKEDLHDMLAS 391 (542)
Q Consensus 365 l~~~F~~~D~d~dG~Is~~EL~~~L~~ 391 (542)
++.+|..+|.+++|.|+..+|..+++.
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 578899999999999999999998875
No 109
>KOG1029|consensus
Probab=93.44 E-value=0.16 Score=56.74 Aligned_cols=60 Identities=17% Similarity=0.353 Sum_probs=49.2
Q ss_pred HHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHHH
Q psy15785 432 DVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDE 511 (542)
Q Consensus 432 ~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~~ 511 (542)
-+.+..|..+|+..+|++|...=+.+|..-| ++... +-.
T Consensus 195 lKY~QlFNa~DktrsG~Lsg~qaR~aL~qS~--Lpq~~---------------------------------------LA~ 233 (1118)
T KOG1029|consen 195 LKYRQLFNALDKTRSGYLSGQQARSALGQSG--LPQNQ---------------------------------------LAH 233 (1118)
T ss_pred hHHHHHhhhcccccccccccHHHHHHHHhcC--Cchhh---------------------------------------Hhh
Confidence 4567899999999999999999999997654 56666 677
Q ss_pred HHHhCCC-CCCceeHHHHHHHH
Q psy15785 512 MYREAPI-KNGMFDYIEFTRIL 532 (542)
Q Consensus 512 l~~~~D~-~dG~Is~~EF~~~l 532 (542)
|+...|. +||+++-+||+-.|
T Consensus 234 IW~LsDvd~DGkL~~dEfilam 255 (1118)
T KOG1029|consen 234 IWTLSDVDGDGKLSADEFILAM 255 (1118)
T ss_pred heeeeccCCCCcccHHHHHHHH
Confidence 8888888 88888888887544
No 110
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=93.35 E-value=1.2 Score=41.82 Aligned_cols=98 Identities=15% Similarity=0.208 Sum_probs=65.7
Q ss_pred HHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhc-------CCCCcchhhh---HHHHhhhcC--------
Q psy15785 365 FKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE-------APGPINFTMF---LTLFGDRLQ-------- 426 (542)
Q Consensus 365 l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~-------~dG~Idf~EF---l~~~~~~~~-------- 426 (542)
|++=..-||.|+||.|.+.|--..++.+|+++--.-+..++-+ ..+.+.-.-| +.-+..-..
T Consensus 9 LQqHvaFFDrd~DGiI~P~dTy~GFraLGf~~~~s~~aa~~I~~~lSy~T~~~w~p~P~f~Iyi~nIhk~kHGSDSg~YD 88 (174)
T PF05042_consen 9 LQQHVAFFDRDKDGIIYPWDTYQGFRALGFGILLSLLAAFIIHGALSYPTQPSWIPDPFFRIYIKNIHKGKHGSDSGAYD 88 (174)
T ss_pred HhhhhceeCCCCCeeECHHHHHHHHHHhCCCHHHHHHHHHHHHcccCCccCCCCCCCCceeEEeecccccccCCCccccc
Confidence 4444557999999999999999999999988766655544433 1121111111 111111111
Q ss_pred --CCCcHHHHHHHHhhhCCCCCCcccHHHHHHHHHHcC
Q psy15785 427 --GTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMG 462 (542)
Q Consensus 427 --~~~~~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g 462 (542)
+.-..+++.++|..+++.+.+.+|..|+.+++....
T Consensus 89 ~eGrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr 126 (174)
T PF05042_consen 89 TEGRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKGNR 126 (174)
T ss_pred cCCcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHhcc
Confidence 122257899999999999999999999999998643
No 111
>KOG4065|consensus
Probab=93.06 E-value=0.27 Score=42.61 Aligned_cols=64 Identities=25% Similarity=0.432 Sum_probs=45.6
Q ss_pred hhCCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHc------CC----CCCHHHHHHHHhc--------CCCCcchhh
Q psy15785 355 AMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL------GK----NPTDDYLEGMMGE--------APGPINFTM 416 (542)
Q Consensus 355 ~~ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~l------g~----~~s~~ei~~l~~~--------~dG~Idf~E 416 (542)
+.+++++++ -..|...|-|++|.++--|+.+++... |- -+++.++..++.. +||.|+|.|
T Consensus 61 a~mtpeqlq--fHYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgE 138 (144)
T KOG4065|consen 61 AKMTPEQLQ--FHYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGE 138 (144)
T ss_pred hhCCHHHHh--hhhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHH
Confidence 468888776 356889999999999999999988643 21 2455666655543 567777777
Q ss_pred hHHH
Q psy15785 417 FLTL 420 (542)
Q Consensus 417 Fl~~ 420 (542)
|+..
T Consensus 139 flK~ 142 (144)
T KOG4065|consen 139 FLKR 142 (144)
T ss_pred HHhh
Confidence 7653
No 112
>KOG0605|consensus
Probab=92.81 E-value=0.045 Score=59.19 Aligned_cols=63 Identities=14% Similarity=0.083 Sum_probs=49.8
Q ss_pred hhhccccccCCCCCCccccc-------ccccccccccccccchhhhhhhhHhhhc---cc---chhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD-------LENLYLQTCNYFSISRRTKMISRIYICR---RV---TTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~-------le~ly~~~~~~~eIs~r~k~L~r~~l~~---r~---ta~~~l~h~w~~~ 320 (542)
..+.|-+|.|+|||..++|. .-+....-...-.+|++|++|+.+++|. |+ .++++-+||||+.
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~d~~~RLG~~G~~EIK~HPfF~~ 450 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLCDPENRLGSKGAEEIKKHPFFKG 450 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhcCHHHhcCcccHHHHhcCCcccc
Confidence 34778889999999999997 2333445566678899999999777777 65 5889999999975
No 113
>KOG0035|consensus
Probab=92.53 E-value=0.39 Score=55.38 Aligned_cols=100 Identities=19% Similarity=0.172 Sum_probs=83.4
Q ss_pred hCCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCH-----HHHHHHHhcC----CCCcchhhhHHHHhhhcC
Q psy15785 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTD-----DYLEGMMGEA----PGPINFTMFLTLFGDRLQ 426 (542)
Q Consensus 356 ~ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~-----~ei~~l~~~~----dG~Idf~EFl~~~~~~~~ 426 (542)
..++....+++..|+.+|+...|.++.+++..+|-.+|.+... .+...++... .|.++|.+|...+.....
T Consensus 740 ~~sQ~v~~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~e 819 (890)
T KOG0035|consen 740 GTSQYVLDELRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREYE 819 (890)
T ss_pred chhHHHHHHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhhhh
Confidence 4677889999999999999999999999999999999987765 2334444443 388999999999988777
Q ss_pred CCCcHHHHHHHHhhhCCCCCCcccHHHHHH
Q psy15785 427 GTDPEDVIKNAFGCFDEDNSGIINEERLRE 456 (542)
Q Consensus 427 ~~~~~~~l~~aF~~~D~d~~G~Is~eEL~~ 456 (542)
..+....+..+|+.+-++.. +|..+||..
T Consensus 820 ~l~~~~r~i~s~~d~~ktk~-~lL~eEL~~ 848 (890)
T KOG0035|consen 820 DLDTELRAILAFEDWAKTKA-YLLLEELVR 848 (890)
T ss_pred hhcHHHHHHHHHHHHHcchh-HHHHHHHHh
Confidence 77778889999999987766 888888877
No 114
>KOG0585|consensus
Probab=92.35 E-value=0.055 Score=57.88 Aligned_cols=64 Identities=14% Similarity=0.060 Sum_probs=53.3
Q ss_pred hhhccccccCCCCCCccccc-------ccccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhhccc
Q psy15785 258 SINLDSDLLDTPDFYWERDD-------LENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCYSIL 323 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~-------le~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~~~ 323 (542)
.|.||.+|+|.=||+.+..- .+++-|. .+.++++++++|+++||++ ||+..++-.|||..+..+
T Consensus 306 GVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP--~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~ 380 (576)
T KOG0585|consen 306 GVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFP--ENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGD 380 (576)
T ss_pred hhhHHHhhhccCCcccchHHHHHHHHhcCcccCC--CcccccHHHHHHHHHHhhcChhheeehhhheecceeccCCC
Confidence 68999999999999998864 3455544 3448999999999999999 999999999999977433
No 115
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=92.33 E-value=0.35 Score=35.97 Aligned_cols=30 Identities=20% Similarity=0.403 Sum_probs=22.3
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHH
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTS 460 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~ 460 (542)
..-...+|+..|++++|.+..+||...+..
T Consensus 20 ~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 20 DEYARQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp HHHHHHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCCCCccHHHHHHHHHH
Confidence 445666788888888888888888887754
No 116
>KOG0575|consensus
Probab=91.94 E-value=0.078 Score=58.16 Aligned_cols=75 Identities=19% Similarity=0.199 Sum_probs=55.1
Q ss_pred hHHHHHHhhhHHHH---HhhhhccccccCCCCCCccccc--c-----cccccccccccccchhhhhhhhHhhhc----cc
Q psy15785 242 IREVLQKTGQLFAL---RHSINLDSDLLDTPDFYWERDD--L-----ENLYLQTCNYFSISRRTKMISRIYICR----RV 307 (542)
Q Consensus 242 ~~~~~~~~G~l~~~---r~~v~l~~~Lld~P~f~w~~~~--l-----e~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ 307 (542)
..||+-+.|.-|-. -..+++|.+|+|.|||--++-+ + ..+-+.. .+|..|++|++++|.. |+
T Consensus 186 APEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~----~ls~~A~dLI~~lL~~~P~~Rp 261 (592)
T KOG0575|consen 186 APEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS----HLSAEAKDLIRKLLRPNPSERP 261 (592)
T ss_pred ChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc----ccCHHHHHHHHHHhcCCcccCC
Confidence 35777777655532 2456899999999999755422 1 2222221 7999999999999888 99
Q ss_pred chhhhhhhhhhhh
Q psy15785 308 TTSASRDEQSVCY 320 (542)
Q Consensus 308 ta~~~l~h~w~~~ 320 (542)
|+.+++.|+|++.
T Consensus 262 sl~~vL~h~Ff~~ 274 (592)
T KOG0575|consen 262 SLDEVLDHPFFKS 274 (592)
T ss_pred CHHHHhcCHhhhC
Confidence 9999999999954
No 117
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=91.75 E-value=0.43 Score=39.00 Aligned_cols=64 Identities=25% Similarity=0.437 Sum_probs=48.1
Q ss_pred HHHHHHhhhCCCCCCcccHHHHHHHHHHc-CC-CCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHH
Q psy15785 433 VIKNAFGCFDEDNSGIINEERLRELLTSM-GD-RFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVD 510 (542)
Q Consensus 433 ~l~~aF~~~D~d~~G~Is~eEL~~~L~~~-g~-~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~ 510 (542)
++..+|+.+-. +.+.+|.++|...|... |. .+++++ +.
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~---------------------------------------~~ 40 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQ---------------------------------------AK 40 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHH---------------------------------------HH
T ss_pred CHHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHH---------------------------------------HH
Confidence 36788999965 78999999999999765 44 467777 55
Q ss_pred HHHHhCCC-----CCCceeHHHHHHHHhcCC
Q psy15785 511 EMYREAPI-----KNGMFDYIEFTRILKHGA 536 (542)
Q Consensus 511 ~l~~~~D~-----~dG~Is~~EF~~~l~~~~ 536 (542)
.++..+.+ ..+.+++++|..+|....
T Consensus 41 ~li~~~~~~~~~~~~~~lt~~gF~~fL~S~~ 71 (83)
T PF09279_consen 41 ELIEKFEPDERNRQKGQLTLEGFTRFLFSDE 71 (83)
T ss_dssp HHHHHHHHHHHHHCTTEEEHHHHHHHHHSTT
T ss_pred HHHHHHccchhhcccCCcCHHHHHHHHCCCc
Confidence 56655533 468899999999987654
No 118
>KOG0588|consensus
Probab=91.30 E-value=0.095 Score=58.20 Aligned_cols=61 Identities=16% Similarity=0.043 Sum_probs=49.0
Q ss_pred hhhhccccccCCCCCCccccc--c----cccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 257 HSINLDSDLLDTPDFYWERDD--L----ENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 257 ~~v~l~~~Lld~P~f~w~~~~--l----e~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
..|+|+.+|.|.=||..++-. | ...|.+ . ..||..+++|+|+|+.. |+|.+++++|||+..
T Consensus 198 CGVILfALLtG~LPFdDdNir~LLlKV~~G~f~M-P--s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g 268 (786)
T KOG0588|consen 198 CGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEM-P--SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSG 268 (786)
T ss_pred hHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccC-C--CcCCHHHHHHHHHHhccCccccccHHHHhhCchhhc
Confidence 468999999999999966654 1 223322 2 67999999999999887 999999999999864
No 119
>KOG4236|consensus
Probab=90.93 E-value=0.13 Score=55.82 Aligned_cols=64 Identities=13% Similarity=-0.007 Sum_probs=53.3
Q ss_pred hhhccccccCCCCCCccccc-----ccccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhhc
Q psy15785 258 SINLDSDLLDTPDFYWERDD-----LENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCYS 321 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~-----le~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~ 321 (542)
.|+.|..|.|+-||.-+.+= ...+-+....|.+||+.+.+|+..+|.. |.+...+|.|||++..
T Consensus 753 GVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y 825 (888)
T KOG4236|consen 753 GVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY 825 (888)
T ss_pred eEEEEEEecccccCCCccchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence 57889999999999876652 5777888999999999999997544433 9999999999999763
No 120
>PF00352 TBP: Transcription factor TFIID (or TATA-binding protein, TBP); InterPro: IPR000814 The TATA-box binding protein (TBP) is required for the initiation of transcription by RNA polymerases I, II and III, from promoters with or without a TATA box [, ]. TBP associates with a host of factors, including the general transcription factors TFIIA, -B, -D, -E, and -H, to form huge multi-subunit pre-initiation complexes on the core promoter. Through its association with different transcription factors, TBP can initiate transcription from different RNA polymerases. There are several related TBPs, including TBP-like (TBPL) proteins []. The C-terminal core of TBP (~180 residues) is highly conserved and contains two 77-amino acid repeats that produce a saddle-shaped structure that straddles the DNA; this region binds to the TATA box and interacts with transcription factors and regulatory proteins []. By contrast, the N-terminal region varies in both length and sequence.; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0006367 transcription initiation from RNA polymerase II promoter; PDB: 1D3U_A 1PCZ_B 1AIS_A 1NGM_A 1TBP_A 1TBA_B 1YTB_A 1RM1_A 1YTF_A 1NH2_A ....
Probab=90.17 E-value=0.94 Score=37.49 Aligned_cols=70 Identities=21% Similarity=0.351 Sum_probs=46.9
Q ss_pred EEEEEeccccChhhHHhhhhcCCccceecccccccCCCCceEEEeeeccCCCCceEEEEcCCcEEEecC-CHHHHHHHHH
Q psy15785 4 VVAFSTAQEYDIDNLKKGIVGKDLYELIEFDDNMQNGENSIQVIAKYQVGKEPRFIYFFQEGSLVAWNV-SDLEIENLLE 82 (542)
Q Consensus 4 v~a~~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~F~~G~vV~w~~-~~~~~~~~l~ 82 (542)
|..+++.-.+||..|+..+. .--|+|-+|+- +. |......-.+-+|+.|.||.-|. ++++....++
T Consensus 10 va~~~l~~~idL~~la~~~~-~~~YePe~fpg--------l~----~r~~~p~~t~~IF~sGki~itGaks~~~~~~a~~ 76 (86)
T PF00352_consen 10 VASFDLPFEIDLEELAEELE-NVEYEPERFPG--------LI----YRLRNPKATVLIFSSGKIVITGAKSEEEAKKAIE 76 (86)
T ss_dssp EEEEE-SSEB-HHHHHHHST-TEEEETTTESS--------EE----EEETTTTEEEEEETTSEEEEEEESSHHHHHHHHH
T ss_pred EEEEECCCccCHHHHHhhcc-CcEEeeccCCe--------EE----EeecCCcEEEEEEcCCEEEEEecCCHHHHHHHHH
Confidence 45678889999999999983 33455544432 11 22234456899999999999998 7777776666
Q ss_pred HHHH
Q psy15785 83 FLKQ 86 (542)
Q Consensus 83 ~l~~ 86 (542)
.+-+
T Consensus 77 ~i~~ 80 (86)
T PF00352_consen 77 KILP 80 (86)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 121
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=89.54 E-value=0.17 Score=50.54 Aligned_cols=29 Identities=10% Similarity=-0.007 Sum_probs=25.5
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.+|..+++|+++|+.. |+|+.++++|||+
T Consensus 255 ~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 255 ILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred ccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 3677789999888887 9999999999996
No 122
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=89.28 E-value=0.38 Score=38.24 Aligned_cols=28 Identities=25% Similarity=0.447 Sum_probs=25.1
Q ss_pred cHHHHHHHHhhhCCCCCCcccHHHHHHHH
Q psy15785 430 PEDVIKNAFGCFDEDNSGIINEERLRELL 458 (542)
Q Consensus 430 ~~~~l~~aF~~~D~d~~G~Is~eEL~~~L 458 (542)
+.+.+..+|+.+ .++.++||.+||++.|
T Consensus 4 s~eqv~~aFr~l-A~~KpyVT~~dLr~~l 31 (69)
T PF08726_consen 4 SAEQVEEAFRAL-AGGKPYVTEEDLRRSL 31 (69)
T ss_dssp TCHHHHHHHHHH-CTSSSCEEHHHHHHHS
T ss_pred CHHHHHHHHHHH-HcCCCcccHHHHHHHc
Confidence 467899999999 6888999999999986
No 123
>KOG0583|consensus
Probab=89.20 E-value=0.18 Score=53.46 Aligned_cols=62 Identities=11% Similarity=0.004 Sum_probs=50.6
Q ss_pred hhhccccccCCCCCCccccc-----ccccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD-----LENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~-----le~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.|+||.+++|.-||.-++.. ...--+....|.. |+.++.|+++|+.. |+|..+++.|||++.
T Consensus 210 GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~-S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 210 GVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLL-SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred HHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcC-CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 68999999999999876643 2333345566666 99999999988887 999999999999986
No 124
>KOG0603|consensus
Probab=88.83 E-value=0.16 Score=56.20 Aligned_cols=60 Identities=10% Similarity=-0.051 Sum_probs=47.4
Q ss_pred hhhccccccCCCCCCcccccccccccccccc---cccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDLENLYLQTCNY---FSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~le~ly~~~~~~---~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.+.||.+|+|.+||--.-.. ..++.+...= ..||+.||+|++.+|.. |+++.+++.|||+
T Consensus 500 GvlLy~ML~G~tp~~~~P~~-~ei~~~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 500 GVLLYEMLTGRTLFAAHPAG-IEIHTRIQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred HHHHHHHHhCCCccccCCch-HHHHHhhcCCccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 57899999999999875554 2222222222 78999999999988877 9999999999999
No 125
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=88.47 E-value=0.18 Score=44.19 Aligned_cols=65 Identities=22% Similarity=0.333 Sum_probs=41.3
Q ss_pred CCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhcCCCCcchhhhHHHHhhhcCCCCcHHHHHH
Q psy15785 357 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGPINFTMFLTLFGDRLQGTDPEDVIKN 436 (542)
Q Consensus 357 ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~~dG~Idf~EFl~~~~~~~~~~~~~~~l~~ 436 (542)
........+.=.|..+|.|+||.|+..|+..+...+ . ..+.-++.
T Consensus 48 ~~~~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l--~---------------------------------~~e~C~~~ 92 (113)
T PF10591_consen 48 SYSECKRVVHWKFCQLDRNKDGVLDRSELKPLRRPL--M---------------------------------PPEHCARP 92 (113)
T ss_dssp TGGGGHHHHHHHHHHH--T-SSEE-TTTTGGGGSTT--S---------------------------------TTGGGHHH
T ss_pred chhhhhhhhhhhHhhhcCCCCCccCHHHHHHHHHHH--h---------------------------------hhHHHHHH
Confidence 444455667778999999999999999997664322 0 11334666
Q ss_pred HHhhhCCCCCCcccHHHHHH
Q psy15785 437 AFGCFDEDNSGIINEERLRE 456 (542)
Q Consensus 437 aF~~~D~d~~G~Is~eEL~~ 456 (542)
.|+..|.|++|.||..|...
T Consensus 93 F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 93 FFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp HHHHH-TT-SSSEEHHHHHH
T ss_pred HHHHcCCCCCCCCCHHHHcc
Confidence 77888888888888888753
No 126
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=88.34 E-value=0.24 Score=51.82 Aligned_cols=63 Identities=14% Similarity=0.125 Sum_probs=46.1
Q ss_pred hhhccccccCCCCCCccccc--cccc-----ccccccccccchhhhhhhhHhhhc------ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENL-----YLQTCNYFSISRRTKMISRIYICR------RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~l-----y~~~~~~~eIs~r~k~L~r~~l~~------r~ta~~~l~h~w~~~ 320 (542)
.++++.+++|.|||...++. +..+ ......+..+++.+++|+.++++. |+++.++++|||+..
T Consensus 223 Gvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp~f~~ 298 (363)
T cd05628 223 GVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTNPFFEG 298 (363)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCCCCCCC
Confidence 56788899999999887654 1111 122344556899999998666553 578999999999975
No 127
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=87.99 E-value=0.28 Score=51.79 Aligned_cols=63 Identities=13% Similarity=0.040 Sum_probs=47.1
Q ss_pred hhhccccccCCCCCCcccccc-------cccccccccccccchhhhhhhhHhhhc------ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL-------ENLYLQTCNYFSISRRTKMISRIYICR------RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l-------e~ly~~~~~~~eIs~r~k~L~r~~l~~------r~ta~~~l~h~w~~~ 320 (542)
.++++.++.|.|||...++.. .........+..+++.+++|++++++. |+++.+++.|||+..
T Consensus 235 G~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~ 310 (381)
T cd05626 235 GVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSE 310 (381)
T ss_pred hhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCC
Confidence 457788899999998776541 112234455667899999999776654 889999999999965
No 128
>PTZ00036 glycogen synthase kinase; Provisional
Probab=87.81 E-value=0.34 Score=52.51 Aligned_cols=63 Identities=11% Similarity=0.025 Sum_probs=43.5
Q ss_pred hhhccccccCCCCCCccccc--cccc------------ccccccc------------------cccchhhhhhhhHhhhc
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENL------------YLQTCNY------------------FSISRRTKMISRIYICR 305 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~l------------y~~~~~~------------------~eIs~r~k~L~r~~l~~ 305 (542)
.++++.+++|.|||.+.++. +..+ ......| ...++.+++|+++|+..
T Consensus 258 Gvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~ 337 (440)
T PTZ00036 258 GCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKY 337 (440)
T ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCC
Confidence 67788889999999887542 0000 0000000 12567889999888877
Q ss_pred ----ccchhhhhhhhhhhh
Q psy15785 306 ----RVTTSASRDEQSVCY 320 (542)
Q Consensus 306 ----r~ta~~~l~h~w~~~ 320 (542)
|+|+.+++.|||+..
T Consensus 338 dP~~R~ta~e~l~hp~f~~ 356 (440)
T PTZ00036 338 EPLKRLNPIEALADPFFDD 356 (440)
T ss_pred ChhHCcCHHHHhCChhHHh
Confidence 999999999999975
No 129
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=87.60 E-value=1.7 Score=35.37 Aligned_cols=59 Identities=15% Similarity=0.343 Sum_probs=42.7
Q ss_pred HHHHHhccccCCCCcceeHHHHHHHHHHc-CC-CCCHHHHHHHHhc--------CCCCcchhhhHHHHhh
Q psy15785 364 NFKEAFNMIDQNRDGFIDKEDLHDMLASL-GK-NPTDDYLEGMMGE--------APGPINFTMFLTLFGD 423 (542)
Q Consensus 364 ~l~~~F~~~D~d~dG~Is~~EL~~~L~~l-g~-~~s~~ei~~l~~~--------~dG~Idf~EFl~~~~~ 423 (542)
++..+|..+.. +.+.|+.++|...|+.- |. ..+..++.+++.. ..+.+++..|...+..
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S 69 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFS 69 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHS
T ss_pred CHHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCC
Confidence 46778888855 78899999999999764 32 4577888777765 3567777777776654
No 130
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=87.07 E-value=0.33 Score=48.79 Aligned_cols=29 Identities=7% Similarity=0.054 Sum_probs=25.7
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.+++.+.+|+++|+.. |+|+.++++|||+
T Consensus 256 ~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 256 RLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred CCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 4677889999888877 9999999999996
No 131
>KOG4666|consensus
Probab=86.81 E-value=1.2 Score=45.59 Aligned_cols=100 Identities=13% Similarity=0.098 Sum_probs=74.3
Q ss_pred HHHHHHHHhccccCCCCcceeHHHHHHHHHHcC-CCCCHHHHHHHHhc----CCCCcchhhhHHHHhhhcCCCCcHHHHH
Q psy15785 361 QIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLG-KNPTDDYLEGMMGE----APGPINFTMFLTLFGDRLQGTDPEDVIK 435 (542)
Q Consensus 361 ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg-~~~s~~ei~~l~~~----~dG~Idf~EFl~~~~~~~~~~~~~~~l~ 435 (542)
.-..++..|..||.+++|.++..|-...+.-+. ...+..-++--++. .||.+.-.+|..++.... ....-.+-
T Consensus 257 vsd~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~l--gv~~l~v~ 334 (412)
T KOG4666|consen 257 VSDKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQVVL--GVEVLRVP 334 (412)
T ss_pred hhhhhhhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHHhc--Ccceeecc
Confidence 347789999999999999999999888877654 44455555544443 688888877777766432 22233466
Q ss_pred HHHhhhCCCCCCcccHHHHHHHHHHcC
Q psy15785 436 NAFGCFDEDNSGIINEERLRELLTSMG 462 (542)
Q Consensus 436 ~aF~~~D~d~~G~Is~eEL~~~L~~~g 462 (542)
-.|+..|...+|+|+.++|+.+....+
T Consensus 335 ~lf~~i~q~d~~ki~~~~f~~fa~~~p 361 (412)
T KOG4666|consen 335 VLFPSIEQKDDPKIYASNFRKFAATEP 361 (412)
T ss_pred ccchhhhcccCcceeHHHHHHHHHhCc
Confidence 789999999999999999999886543
No 132
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=86.70 E-value=0.43 Score=47.32 Aligned_cols=84 Identities=11% Similarity=-0.045 Sum_probs=52.8
Q ss_pred hhHHHHHhhhhccccccCCCCCCcccccc------cccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDDL------ENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVC 319 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~l------e~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~ 319 (542)
+.++.+ .++++..+.|.|||...++.. ....-... ...+++.+.++++.++.. |+|+.+++.|||+.
T Consensus 179 sDv~sl--G~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~ 255 (274)
T cd06609 179 ADIWSL--GITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLE-GNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIK 255 (274)
T ss_pred hhHHHH--HHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCc-ccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhc
Confidence 444444 667788889999997655431 01000111 112667788888877766 99999999999998
Q ss_pred hcccccchhHHHHhhhh
Q psy15785 320 YSILTIIDSKMSSRKTA 336 (542)
Q Consensus 320 ~~~~~~l~~~~~~~~~~ 336 (542)
.......-..+...+++
T Consensus 256 ~~~~~~~~~~~~~~~~~ 272 (274)
T cd06609 256 KAKKTSYLTLLIERIKK 272 (274)
T ss_pred CCCcccHHHHHHHHHHh
Confidence 75554444444444443
No 133
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=86.29 E-value=0.37 Score=50.82 Aligned_cols=63 Identities=14% Similarity=0.087 Sum_probs=46.0
Q ss_pred hhhccccccCCCCCCccccc--ccc-----cccccccccccchhhhhhhhHhhhc------ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LEN-----LYLQTCNYFSISRRTKMISRIYICR------RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~-----ly~~~~~~~eIs~r~k~L~r~~l~~------r~ta~~~l~h~w~~~ 320 (542)
.++++.+++|.|||...+.. +.. ..........+++.+++|++.++.. |+++.+++.|||++.
T Consensus 234 G~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~ 309 (370)
T cd05621 234 GVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKN 309 (370)
T ss_pred hHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCC
Confidence 45778889999999877643 111 1123344567899999999877743 779999999999975
No 134
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=85.92 E-value=0.42 Score=50.38 Aligned_cols=63 Identities=14% Similarity=0.134 Sum_probs=46.9
Q ss_pred hhhccccccCCCCCCccccc--cccc-----ccccccccccchhhhhhhhHhhhc------ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENL-----YLQTCNYFSISRRTKMISRIYICR------RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~l-----y~~~~~~~eIs~r~k~L~r~~l~~------r~ta~~~l~h~w~~~ 320 (542)
.++++.++.|.|||...+.. +..+ .........+|..+++|++.+|.. |+++.++++|||++.
T Consensus 234 GvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~ 309 (370)
T cd05596 234 GVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKN 309 (370)
T ss_pred hHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCC
Confidence 56788889999999887653 1221 122344556899999999888854 789999999999975
No 135
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=85.34 E-value=0.26 Score=49.88 Aligned_cols=31 Identities=6% Similarity=0.044 Sum_probs=26.1
Q ss_pred cchhhhhhhhHhhhc----ccchhhhhhhhhhhhc
Q psy15785 291 ISRRTKMISRIYICR----RVTTSASRDEQSVCYS 321 (542)
Q Consensus 291 Is~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~ 321 (542)
.++.+++|+++|+.. |+|+.++++|||++..
T Consensus 260 ~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~ 294 (303)
T cd07869 260 YVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL 294 (303)
T ss_pred CChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence 456778899888877 9999999999999763
No 136
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=85.06 E-value=0.61 Score=48.95 Aligned_cols=63 Identities=14% Similarity=0.102 Sum_probs=46.0
Q ss_pred hhhccccccCCCCCCcccccc--c-----ccccccccccccchhhhhhhhHhhhc---cc---chhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL--E-----NLYLQTCNYFSISRRTKMISRIYICR---RV---TTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l--e-----~ly~~~~~~~eIs~r~k~L~r~~l~~---r~---ta~~~l~h~w~~~ 320 (542)
.++++.+++|.|||...++.- . ........+..+++.+++|+++++.. |+ ++.++++|||+..
T Consensus 231 Gvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~~~p~~R~~~~t~~ell~h~~~~~ 306 (376)
T cd05598 231 GVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLCCGAEDRLGKNGADEIKAHPFFKG 306 (376)
T ss_pred cceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHhcCHhhcCCCCCHHHHhCCCCcCC
Confidence 568888999999998877531 1 11223344567899999998665444 88 8999999999965
No 137
>KOG0592|consensus
Probab=84.81 E-value=0.38 Score=52.40 Aligned_cols=63 Identities=14% Similarity=0.092 Sum_probs=47.8
Q ss_pred hhhccccccCCCCCCcccccc--cccc-cccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL--ENLY-LQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l--e~ly-~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.-+||.+|.|.|||-+.++.+ +++- ....-=.+.++-+++|++++|.. |+|++++-.||+|..
T Consensus 274 GCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~ 343 (604)
T KOG0592|consen 274 GCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEG 343 (604)
T ss_pred HHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCccccc
Confidence 458999999999999999873 2221 11222245678899999887777 999999999999864
No 138
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=84.66 E-value=0.67 Score=47.57 Aligned_cols=63 Identities=10% Similarity=0.013 Sum_probs=45.7
Q ss_pred hhhccccccCCCCCCccccc--ccc-----cccccccccccchhhhhhhhHhhhc---ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LEN-----LYLQTCNYFSISRRTKMISRIYICR---RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~-----ly~~~~~~~eIs~r~k~L~r~~l~~---r~ta~~~l~h~w~~~ 320 (542)
.++++.++.|.+||...+.. +.. -.........+++.+.+|++.++.. |+++.+++.|||+..
T Consensus 196 G~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~~p~~R~t~~~l~~h~~~~~ 268 (330)
T cd05601 196 GVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLCGQKERLGYEGLCCHPFFSK 268 (330)
T ss_pred cceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHccChhhCCCHHHHhCCCCcCC
Confidence 56788899999998765543 111 1122233456888899999877765 999999999999975
No 139
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=84.58 E-value=0.61 Score=46.41 Aligned_cols=85 Identities=11% Similarity=-0.067 Sum_probs=52.5
Q ss_pred hhHHHHHhhhhccccccCCCCCCcccccc--ccccc--ccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhhc
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDDL--ENLYL--QTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCYS 321 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~l--e~ly~--~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~ 321 (542)
+.++.+ .++++.+++|.|||...++.- ..+.. ...-...++..+.+++++++.. |+++.+++.|||+...
T Consensus 182 ~Dv~sl--G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06640 182 ADIWSL--GITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKN 259 (277)
T ss_pred HHHHHH--HHHHHHHHHCCCCCCCcChHhHhhhhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhc
Confidence 344444 667788899999988766541 11100 0111123566777888887765 9999999999999763
Q ss_pred c-cccchhHHHHhhhh
Q psy15785 322 I-LTIIDSKMSSRKTA 336 (542)
Q Consensus 322 ~-~~~l~~~~~~~~~~ 336 (542)
. ....-..+..|+++
T Consensus 260 ~~~~~~~~~~~~~~~~ 275 (277)
T cd06640 260 AKKTSYLTELIDRFKR 275 (277)
T ss_pred chhhhHHHHHHHHHHh
Confidence 3 24444445555443
No 140
>KOG0616|consensus
Probab=84.31 E-value=0.37 Score=48.91 Aligned_cols=63 Identities=13% Similarity=0.088 Sum_probs=43.7
Q ss_pred hhhccccccCCCCCCccccc--ccccccccccc-cccchhhhhhhhHhhhc----c-----cchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQTCNY-FSISRRTKMISRIYICR----R-----VTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~~~~~-~eIs~r~k~L~r~~l~~----r-----~ta~~~l~h~w~~~ 320 (542)
.|..|-+++|.|||+.+++- ++.+-..--.+ .-.|+.+++|++++|.. | .-..++-+|||+..
T Consensus 228 GVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~ 302 (355)
T KOG0616|consen 228 GVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKG 302 (355)
T ss_pred HHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccc
Confidence 46778899999999999984 23222222222 23688899999877776 3 23456788999975
No 141
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=83.90 E-value=0.74 Score=48.41 Aligned_cols=63 Identities=14% Similarity=0.068 Sum_probs=44.9
Q ss_pred hhhccccccCCCCCCccccc--cccc-----ccccccccccchhhhhhhhHhhhc------ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENL-----YLQTCNYFSISRRTKMISRIYICR------RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~l-----y~~~~~~~eIs~r~k~L~r~~l~~------r~ta~~~l~h~w~~~ 320 (542)
.++++.+++|.|||...++. +..+ ......+..++..+++|+++++.. |+++.+++.|||+..
T Consensus 235 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~~~~~r~~r~~~~~~l~hp~~~~ 310 (377)
T cd05629 235 GAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLITNAENRLGRGGAHEIKSHPFFRG 310 (377)
T ss_pred chhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhcCHhhcCCCCCHHHHhcCCCcCC
Confidence 45788889999999776543 1111 112234456889999999887754 569999999999965
No 142
>KOG0042|consensus
Probab=83.87 E-value=1.7 Score=47.61 Aligned_cols=71 Identities=18% Similarity=0.266 Sum_probs=63.3
Q ss_pred hCCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhc----CCCCcchhhhHHHHhhhcC
Q psy15785 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTMFLTLFGDRLQ 426 (542)
Q Consensus 356 ~ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~----~dG~Idf~EFl~~~~~~~~ 426 (542)
.++++++...+..|..+|.|+.|.++..++..+|+..+...+.+.++++++. .+|.+...||..++.....
T Consensus 586 ~~~~~~~~~~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~~ 660 (680)
T KOG0042|consen 586 KLTPEDFLRRKTRFAFLDADKKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMSAIKN 660 (680)
T ss_pred ccCHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHhc
Confidence 6899999999999999999999999999999999999888888888887776 4789999999988876543
No 143
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=83.75 E-value=0.45 Score=49.06 Aligned_cols=63 Identities=10% Similarity=0.108 Sum_probs=44.1
Q ss_pred hhhccccccCCCCCCccccc--ccccccccccc-cccchhhhhhhhHhhhc----ccc-----hhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQTCNY-FSISRRTKMISRIYICR----RVT-----TSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~~~~~-~eIs~r~k~L~r~~l~~----r~t-----a~~~l~h~w~~~ 320 (542)
.++++.++.|.|||...++. ++.+......+ ..++.++++|++.++.. |++ +.+++.|||+..
T Consensus 202 G~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 202 GVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHG 276 (329)
T ss_pred HHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence 46788889999999876653 12221111111 12788999999988877 876 699999999975
No 144
>KOG3555|consensus
Probab=83.41 E-value=1.8 Score=44.57 Aligned_cols=63 Identities=14% Similarity=0.359 Sum_probs=52.4
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHH
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVD 510 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~ 510 (542)
...+-.+|..+|.|.+|.++..||+.+-. ...| .| ++
T Consensus 249 Kds~gWMFnklD~N~Dl~Ld~sEl~~I~l------dknE-------~C------------------------------ik 285 (434)
T KOG3555|consen 249 KDSLGWMFNKLDTNYDLLLDQSELRAIEL------DKNE-------AC------------------------------IK 285 (434)
T ss_pred hhhhhhhhhccccccccccCHHHhhhhhc------cCch-------hH------------------------------HH
Confidence 56789999999999999999999998752 2222 12 88
Q ss_pred HHHHhCCC-CCCceeHHHHHHHHhcCC
Q psy15785 511 EMYREAPI-KNGMFDYIEFTRILKHGA 536 (542)
Q Consensus 511 ~l~~~~D~-~dG~Is~~EF~~~l~~~~ 536 (542)
.+|...|. .||.|+-+||+..+.+..
T Consensus 286 pFfnsCD~~kDg~iS~~EWC~CF~k~~ 312 (434)
T KOG3555|consen 286 PFFNSCDTYKDGSISTNEWCYCFQKSD 312 (434)
T ss_pred HHHhhhcccccCccccchhhhhhccCC
Confidence 89999999 999999999999887653
No 145
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=83.29 E-value=0.64 Score=47.25 Aligned_cols=27 Identities=7% Similarity=0.156 Sum_probs=23.0
Q ss_pred chhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 292 SRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 292 s~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
+..+.+|+++||.. |+|+.++++|||+
T Consensus 287 ~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 287 DSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred ChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 45577888888877 9999999999996
No 146
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=83.16 E-value=0.64 Score=45.66 Aligned_cols=67 Identities=10% Similarity=-0.032 Sum_probs=43.4
Q ss_pred hhHHHHHhhhhccccccCCCCCCccccc--c----cccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDD--L----ENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~--l----e~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
+.++.+ .++++..+.|+|||...++. + .........-...++.+++|++.++.. |+|+.+++.|||+
T Consensus 199 ~Dv~sl--G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 199 SDVWSL--GITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred ccHHHh--HHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 344443 57778888999999754432 1 111111111123567888998887755 9999999999996
No 147
>KOG0598|consensus
Probab=82.58 E-value=0.54 Score=48.85 Aligned_cols=63 Identities=16% Similarity=0.080 Sum_probs=48.7
Q ss_pred hhhccccccCCCCCCccccc--cccc-ccccccccc-cchhhhhhhhHhhhc----c----cchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENL-YLQTCNYFS-ISRRTKMISRIYICR----R----VTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~l-y~~~~~~~e-Is~r~k~L~r~~l~~----r----~ta~~~l~h~w~~~ 320 (542)
.|.+|-+|+|.|||+.++.. .+.+ -..+..... +|.++++|++++|.+ | ..+.++..||++..
T Consensus 212 GillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~ 286 (357)
T KOG0598|consen 212 GILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKG 286 (357)
T ss_pred HHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCccccc
Confidence 56789999999999999965 2332 223455666 999999999998888 5 36777889999976
No 148
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=82.57 E-value=0.73 Score=47.50 Aligned_cols=63 Identities=14% Similarity=0.116 Sum_probs=44.8
Q ss_pred hhhccccccCCCCCCccccc--cccccc------ccccccccchhhhhhhhHhhhc------ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYL------QTCNYFSISRRTKMISRIYICR------RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~------~~~~~~eIs~r~k~L~r~~l~~------r~ta~~~l~h~w~~~ 320 (542)
.++++.+++|.|||...+.. +..+.. .......+++.+++|++++++. |+++.++++|||+..
T Consensus 195 Gvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~ 271 (332)
T cd05623 195 GVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTG 271 (332)
T ss_pred HHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCC
Confidence 46778889999999876642 111111 1122356899999999888755 678999999999975
No 149
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=82.50 E-value=0.81 Score=45.57 Aligned_cols=72 Identities=14% Similarity=-0.113 Sum_probs=47.5
Q ss_pred hhhccccccCCCCCCcccccc------cccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhhcccccch
Q psy15785 258 SINLDSDLLDTPDFYWERDDL------ENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCYSILTIID 327 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l------e~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~~~~~l~ 327 (542)
.++++.++++.|||.-.++.- .........-..++..+++|++.++.. |+++.+++.|||+......++.
T Consensus 195 Gvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~~ 274 (282)
T cd06643 195 GITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSNKPIR 274 (282)
T ss_pred HHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccCCCCHH
Confidence 566777788999987654421 111111112234677889999888865 9999999999999875545444
Q ss_pred hH
Q psy15785 328 SK 329 (542)
Q Consensus 328 ~~ 329 (542)
..
T Consensus 275 ~~ 276 (282)
T cd06643 275 EL 276 (282)
T ss_pred HH
Confidence 33
No 150
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=82.38 E-value=0.59 Score=47.27 Aligned_cols=29 Identities=10% Similarity=0.052 Sum_probs=24.7
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
..+.++.+++++|+.. |+|+.+++.|||+
T Consensus 284 ~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 284 KPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred CCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 5667788888888876 9999999999996
No 151
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=82.35 E-value=11 Score=35.40 Aligned_cols=74 Identities=22% Similarity=0.389 Sum_probs=49.8
Q ss_pred EEEEEeccccChhhHHhhhhcCCccceecccccccCCCCceEEEeeeccCCCCceEEEEcCCcEEEecCCHHH-----HH
Q psy15785 4 VVAFSTAQEYDIDNLKKGIVGKDLYELIEFDDNMQNGENSIQVIAKYQVGKEPRFIYFFQEGSLVAWNVSDLE-----IE 78 (542)
Q Consensus 4 v~a~~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~F~~G~vV~w~~~~~~-----~~ 78 (542)
|.+-.++.++||+.+...+.... |.+..|+.-. |......-.+-||+.|-+|+=|.--.+ ..
T Consensus 14 VAS~~L~~elDL~~~~~~l~~ae-YnP~qFpGlv------------~Rl~ePk~a~LIF~SGK~VcTGaKs~ed~~~av~ 80 (185)
T COG2101 14 VASVDLGQELDLEEVALDLPGAE-YNPEQFPGLV------------YRLEEPKTAALIFRSGKVVCTGAKSVEDVHRAVK 80 (185)
T ss_pred EEEechhhhccHHHHHhhCCCCc-cCHhHCCeeE------------EEecCCcceEEEEecCcEEEeccCcHHHHHHHHH
Confidence 55667899999999999997655 7777777421 222234456889999999999976333 33
Q ss_pred HHHHHHHHhhhC
Q psy15785 79 NLLEFLKQFEIK 90 (542)
Q Consensus 79 ~~l~~l~~~~~~ 90 (542)
.+++.|+....+
T Consensus 81 ~~~~~L~~~g~~ 92 (185)
T COG2101 81 KLAKKLKDGGID 92 (185)
T ss_pred HHHHHHHhcCcC
Confidence 445555553333
No 152
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=82.25 E-value=0.7 Score=45.29 Aligned_cols=63 Identities=13% Similarity=0.029 Sum_probs=44.2
Q ss_pred hhhccccccCCCCCCcccccc-------cccccccccccccchhhhhhhhHhhhc----ccch---hhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL-------ENLYLQTCNYFSISRRTKMISRIYICR----RVTT---SASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l-------e~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta---~~~l~h~w~~~ 320 (542)
.++++..+.|.|||-..++.. ............+++.+.+++++++.. |+++ .+++.|||+..
T Consensus 180 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~ 256 (260)
T cd05611 180 GCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKS 256 (260)
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhc
Confidence 667788888999997665431 122222222335788999999888876 9965 69999999854
No 153
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=81.87 E-value=0.76 Score=48.39 Aligned_cols=63 Identities=11% Similarity=-0.032 Sum_probs=45.1
Q ss_pred hhhccccccCCCCCCcccccc-------cccccccccccccchhhhhhhhHhhhc---ccc---hhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL-------ENLYLQTCNYFSISRRTKMISRIYICR---RVT---TSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l-------e~ly~~~~~~~eIs~r~k~L~r~~l~~---r~t---a~~~l~h~w~~~ 320 (542)
.++++.++.|.|||...++.- ............+++.+.+|+.+++.. |++ +.+++.|||++.
T Consensus 235 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~p~~R~~~~~~~ei~~hp~f~~ 310 (382)
T cd05625 235 GVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLCRGPEDRLGKNGADEIKAHPFFKT 310 (382)
T ss_pred hHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHccCHhHcCCCCCHHHHhcCCCcCC
Confidence 457788899999999877541 112223344567899999998665442 766 999999999965
No 154
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=81.82 E-value=0.83 Score=47.14 Aligned_cols=63 Identities=17% Similarity=0.164 Sum_probs=44.6
Q ss_pred hhhccccccCCCCCCccccc--cccc------ccccccccccchhhhhhhhHhhhc------ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENL------YLQTCNYFSISRRTKMISRIYICR------RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~l------y~~~~~~~eIs~r~k~L~r~~l~~------r~ta~~~l~h~w~~~ 320 (542)
.++++.++.|.+||...+.. +..+ +.-...+..+++.+++|++.+++. |+++.++++|||+..
T Consensus 195 G~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~ 271 (331)
T cd05597 195 GVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEG 271 (331)
T ss_pred hhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCC
Confidence 56788889999999876542 1111 111123345889999999887755 679999999999865
No 155
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=81.79 E-value=0.77 Score=46.60 Aligned_cols=31 Identities=3% Similarity=0.051 Sum_probs=27.1
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.+++.+++|+++|+.. |+|+.+++.|||++.
T Consensus 257 ~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~ 291 (309)
T cd07872 257 RLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRS 291 (309)
T ss_pred CCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhh
Confidence 5778888999888875 999999999999976
No 156
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=81.76 E-value=0.88 Score=47.41 Aligned_cols=63 Identities=14% Similarity=0.155 Sum_probs=45.0
Q ss_pred hhhccccccCCCCCCccccc--cc-----ccccccccccccchhhhhhhhHhhhc---ccc---hhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LE-----NLYLQTCNYFSISRRTKMISRIYICR---RVT---TSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le-----~ly~~~~~~~eIs~r~k~L~r~~l~~---r~t---a~~~l~h~w~~~ 320 (542)
.++++.+++|.|||...++. .. ...........+++.+++|+++++.. |++ +.+++.|||++.
T Consensus 226 G~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~~p~~R~~~~~~~~ll~h~~~~~ 301 (364)
T cd05599 226 GVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCCEAERRLGNNGVNEIKSHPFFKG 301 (364)
T ss_pred hhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHccCHhhcCCCCCHHHHhcCCCcCC
Confidence 56788889999999876653 11 11122233346789999999877764 776 999999999965
No 157
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=81.69 E-value=0.47 Score=47.31 Aligned_cols=29 Identities=7% Similarity=0.009 Sum_probs=25.2
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
++++.+++|+++|+.. |+|+.+++.|||+
T Consensus 256 ~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 256 EIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred CcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 5677788999888876 9999999999996
No 158
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=81.28 E-value=0.7 Score=48.08 Aligned_cols=63 Identities=11% Similarity=0.102 Sum_probs=44.5
Q ss_pred hhhccccccCCCCCCccccc--cccccccccc-ccccchhhhhhhhHhhhc----cc-----chhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQTCN-YFSISRRTKMISRIYICR----RV-----TTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~~~~-~~eIs~r~k~L~r~~l~~----r~-----ta~~~l~h~w~~~ 320 (542)
.++++.++.|.|||...++. ...+...... -..+++.+++++++++.. |+ +++++++|||+..
T Consensus 215 Gvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~ 289 (340)
T PTZ00426 215 GIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGN 289 (340)
T ss_pred hhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 67888899999999877654 1111111111 123678889999888876 64 8999999999975
No 159
>cd04517 TLF TBP-like factors (TLF; also called TLP, TRF, TRP), which are found in most metazoans. TLFs and TBPs have well-conserved core domains; however, they only share about 60% similarity. TLFs, like TBPs, interact with TFIIA and TFIIB, which are part of the basal transcription machinery. Yet, in contrast to TBPs, TLFs seem not to interact with the TATA-box and even have a negative effect on the transcription of TATA-containing promoters. Recent results indicate that TLFs are involved in the transcription via TATA-less promoters.
Probab=81.14 E-value=5.7 Score=37.54 Aligned_cols=68 Identities=13% Similarity=0.082 Sum_probs=45.4
Q ss_pred EEEEEE-eccccChhhHHhhhhcCCccceecccccccCCCCceEEEeeeccCCCCceEEEEcCCcEEEecC-CHHHHHHH
Q psy15785 3 NVVAFS-TAQEYDIDNLKKGIVGKDLYELIEFDDNMQNGENSIQVIAKYQVGKEPRFIYFFQEGSLVAWNV-SDLEIENL 80 (542)
Q Consensus 3 ~v~a~~-~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~F~~G~vV~w~~-~~~~~~~~ 80 (542)
+|+|-+ +...+||.+|...+.. --|+| +|+-- +-+.. +..-.+-+|++|.+|+=|. +.++....
T Consensus 7 Nvvas~~l~~~idL~~la~~l~n-~eYeP-~fpgl----------i~R~~--~Pk~t~lIF~sGKiviTGaks~~~~~~a 72 (174)
T cd04517 7 NVVCQFSLRCHIDLRKLALAGRN-VEYNP-RYPKV----------TMRLR--EPRATASVWSSGKITITGATSEEEAKQA 72 (174)
T ss_pred EEEEEEEcCCcccHHHHHhhCCC-CEEeC-CCCEE----------EEEec--CCcEEEEEECCCeEEEEccCCHHHHHHH
Confidence 344444 7889999999988754 34666 66531 21222 2334789999999999998 56666655
Q ss_pred HHHH
Q psy15785 81 LEFL 84 (542)
Q Consensus 81 l~~l 84 (542)
++.+
T Consensus 73 ~~~~ 76 (174)
T cd04517 73 ARRA 76 (174)
T ss_pred HHHH
Confidence 5544
No 160
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=80.99 E-value=0.7 Score=45.93 Aligned_cols=67 Identities=4% Similarity=0.006 Sum_probs=45.5
Q ss_pred hhHHHHHhhhhccccccCCCCCCcccccc-----------------------cccc---------cccccccccchhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDDL-----------------------ENLY---------LQTCNYFSISRRTKM 297 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~l-----------------------e~ly---------~~~~~~~eIs~r~k~ 297 (542)
+.++.+ .++++.++++.|||..+.+.. ..+. ........+++.+++
T Consensus 183 ~Dv~sl--G~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (285)
T cd07861 183 VDIWSI--GTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLD 260 (285)
T ss_pred HHHHHH--HHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHH
Confidence 344444 567888889999998654310 0000 001123457888899
Q ss_pred hhhHhhhc----ccchhhhhhhhhh
Q psy15785 298 ISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 298 L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
|+++|+.. |+|+.+++.|||+
T Consensus 261 li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 261 LLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred HHHHHhcCChhhCCCHHHHhcCCCC
Confidence 99998887 9999999999996
No 161
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=80.73 E-value=0.91 Score=45.46 Aligned_cols=62 Identities=8% Similarity=-0.081 Sum_probs=41.2
Q ss_pred hhhccccccCCCCCCccccc--ccccccc----cccccccchhhhhhhhHhhhc----ccchhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQ----TCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVC 319 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~----~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~ 319 (542)
.++++.++.|.|||.+.++. +..+... ...-..++...++|+++++.. |+++.+++.|||++
T Consensus 220 Gvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 220 GITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred HHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 56777788999999876553 1111101 111123455678888887765 99999999999984
No 162
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=80.53 E-value=0.87 Score=45.25 Aligned_cols=67 Identities=12% Similarity=0.059 Sum_probs=45.6
Q ss_pred hHHHHHhhhhccccccCCCCCCccccc------c-cccccccccccccchhhhhhhhHhhhc----ccch-hhhhhhhhh
Q psy15785 251 QLFALRHSINLDSDLLDTPDFYWERDD------L-ENLYLQTCNYFSISRRTKMISRIYICR----RVTT-SASRDEQSV 318 (542)
Q Consensus 251 ~l~~~r~~v~l~~~Lld~P~f~w~~~~------l-e~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta-~~~l~h~w~ 318 (542)
.+..+ .++++.++.|.+||....++ + ............+++.+.+|++.|+.. |+++ .++++|||+
T Consensus 188 Dvwsl--G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~ 265 (267)
T PHA03390 188 DWWAV--GVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFL 265 (267)
T ss_pred hHHHH--HHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcc
Confidence 44444 66778888999998744332 1 111222233346889999999888876 9975 999999998
Q ss_pred h
Q psy15785 319 C 319 (542)
Q Consensus 319 ~ 319 (542)
.
T Consensus 266 ~ 266 (267)
T PHA03390 266 K 266 (267)
T ss_pred c
Confidence 5
No 163
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=80.44 E-value=1.2 Score=46.02 Aligned_cols=63 Identities=14% Similarity=0.067 Sum_probs=45.9
Q ss_pred hhhccccccCCCCCCcccccc--cc-----cccccccccccchhhhhhhhHhhhc---ccc-hhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL--EN-----LYLQTCNYFSISRRTKMISRIYICR---RVT-TSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l--e~-----ly~~~~~~~eIs~r~k~L~r~~l~~---r~t-a~~~l~h~w~~~ 320 (542)
.++++.+++|.+||...++.. .. -.........+++.+.+|++.++.. |++ +.+++.|||+..
T Consensus 217 G~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~dp~~R~~s~~~ll~hp~~~~ 290 (350)
T cd05573 217 GVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLCDPEDRLGSFEEIKSHPFFKG 290 (350)
T ss_pred chhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHccChhhcCCCHHHHhcCCCcCC
Confidence 467888999999998766431 11 1223334445789999999877755 999 999999999965
No 164
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=80.00 E-value=1.2 Score=45.82 Aligned_cols=63 Identities=19% Similarity=0.062 Sum_probs=44.5
Q ss_pred hhhccccccCCCCCCccccc--ccc-----cccccccc----cccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LEN-----LYLQTCNY----FSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~-----ly~~~~~~----~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.++++.+++|.|||...++. ... .......+ ..+++.+.+|+++|+.. |+++.+++.|||+..
T Consensus 185 G~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~ 262 (333)
T cd05600 185 GCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKE 262 (333)
T ss_pred hHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCC
Confidence 56788889999999776543 111 11111222 25788899999888766 899999999999975
No 165
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=79.67 E-value=1.1 Score=43.75 Aligned_cols=61 Identities=10% Similarity=0.019 Sum_probs=42.6
Q ss_pred hhhccccccCCCCCCccccc--c----c---ccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--L----E---NLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--l----e---~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.++++.++.|.+||.-.++. + . ..+.....+..+++.+.+++++++.. |+++.+++.|||+
T Consensus 194 G~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 194 GITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred hHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 56677778899998654432 0 1 11112223457788889999888776 9999999999996
No 166
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=79.64 E-value=1.1 Score=44.91 Aligned_cols=63 Identities=10% Similarity=0.081 Sum_probs=44.2
Q ss_pred hhhccccccCCCCCCcccccc------ccccc-ccccccccchhhhhhhhHhhhc----cc-----chhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL------ENLYL-QTCNYFSISRRTKMISRIYICR----RV-----TTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l------e~ly~-~~~~~~eIs~r~k~L~r~~l~~----r~-----ta~~~l~h~w~~~ 320 (542)
.++++.++.|.+||.+..... ..+.. .......+++.+++|++.++.. |+ |+.++++|||++.
T Consensus 184 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~ 262 (280)
T cd05608 184 GVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRD 262 (280)
T ss_pred HHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhc
Confidence 567888889999998865431 11111 1112235788899999888766 77 8899999999976
No 167
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=79.30 E-value=1 Score=46.14 Aligned_cols=33 Identities=6% Similarity=-0.067 Sum_probs=27.4
Q ss_pred ccccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 288 YFSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 288 ~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
+..+++.+.+|+++|+.. |+|+.++++|||++.
T Consensus 259 ~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~ 295 (338)
T cd07859 259 FPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKG 295 (338)
T ss_pred cCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhh
Confidence 345677788888888876 999999999999976
No 168
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=79.26 E-value=1 Score=46.25 Aligned_cols=63 Identities=10% Similarity=0.113 Sum_probs=44.6
Q ss_pred hhhccccccCCCCCCccccc--ccccccc-cccccccchhhhhhhhHhhhc----cc-----chhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQ-TCNYFSISRRTKMISRIYICR----RV-----TTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~-~~~~~eIs~r~k~L~r~~l~~----r~-----ta~~~l~h~w~~~ 320 (542)
.++++.++.|.|||...+.. ...+... ..--..+++.+++|++.|+.. |+ ++.+++.|||+..
T Consensus 182 G~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~ 256 (323)
T cd05571 182 GVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFAS 256 (323)
T ss_pred chhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 46788889999999765543 1111111 111135788999999988877 99 8999999999965
No 169
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=79.13 E-value=1 Score=45.39 Aligned_cols=31 Identities=3% Similarity=0.016 Sum_probs=27.1
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.+++.+++|+++|+.. |+|+.+++.|||+..
T Consensus 257 ~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~ 291 (301)
T cd07873 257 RLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHC 291 (301)
T ss_pred CCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 5678889999888887 999999999999854
No 170
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=79.12 E-value=0.8 Score=46.16 Aligned_cols=68 Identities=13% Similarity=0.184 Sum_probs=46.7
Q ss_pred hHHHHHhhhhccccccCCCCCCccccc--ccccccccccc-cccchhhhhhhhHhhhc----cc-----chhhhhhhhhh
Q psy15785 251 QLFALRHSINLDSDLLDTPDFYWERDD--LENLYLQTCNY-FSISRRTKMISRIYICR----RV-----TTSASRDEQSV 318 (542)
Q Consensus 251 ~l~~~r~~v~l~~~Lld~P~f~w~~~~--le~ly~~~~~~-~eIs~r~k~L~r~~l~~----r~-----ta~~~l~h~w~ 318 (542)
.+.++ .++++.+++|.|||...++. +..+......+ ..++..+++|+++|+.. |+ ++.+++.|||+
T Consensus 180 DiwSl--G~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~ 257 (291)
T cd05612 180 DWWAL--GILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWF 257 (291)
T ss_pred hHHHH--HHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccc
Confidence 44444 67888889999999876653 12221111122 23578899999988877 88 49999999999
Q ss_pred hh
Q psy15785 319 CY 320 (542)
Q Consensus 319 ~~ 320 (542)
..
T Consensus 258 ~~ 259 (291)
T cd05612 258 KS 259 (291)
T ss_pred cC
Confidence 65
No 171
>KOG3866|consensus
Probab=78.80 E-value=3.3 Score=42.01 Aligned_cols=129 Identities=16% Similarity=0.210 Sum_probs=73.8
Q ss_pred HHhhCCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhcCCCCcchhhhHHHHhhhcCCCCcHH
Q psy15785 353 VFAMFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGPINFTMFLTLFGDRLQGTDPED 432 (542)
Q Consensus 353 ~~~~ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~~dG~Idf~EFl~~~~~~~~~~~~~~ 432 (542)
.++.+++++.++-..-|...-+.++. -.+++.+-+.+++..++...+|- +-+ .-
T Consensus 191 yL~~l~eE~Rkeaesk~EE~~krH~~----------HpKvnhPGSkdQLkEVWEE~DgL-dpn---------------~f 244 (442)
T KOG3866|consen 191 YLAQLTEEERKEAESKHEESLKRHND----------HPKVNHPGSKDQLKEVWEESDGL-DPN---------------QF 244 (442)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHhhcc----------CccCCCCCcHHHHHHHHHHhcCC-Ccc---------------cC
Confidence 44577777776655444321111100 01234456677777776654432 111 11
Q ss_pred HHHHHHhhhCCCCCCcccHHHHHHHHHHc----CCCC-CHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHH
Q psy15785 433 VIKNAFGCFDEDNSGIINEERLRELLTSM----GDRF-TDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMI 507 (542)
Q Consensus 433 ~l~~aF~~~D~d~~G~Is~eEL~~~L~~~----g~~l-s~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~ 507 (542)
.-+..|...|.|++|+++..||..++..- -.+- .+++ |.+. -.+.+.+
T Consensus 245 dPKTFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDD-M~Em---eEErlRM----------------------- 297 (442)
T KOG3866|consen 245 DPKTFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDD-MKEM---EEERLRM----------------------- 297 (442)
T ss_pred CcchheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchH-HHHH---HHHHHHH-----------------------
Confidence 23567889999999999999999988652 1122 2222 1111 0011111
Q ss_pred HHHHHHHhCCC-CCCceeHHHHHHHHhcC
Q psy15785 508 EVDEMYREAPI-KNGMFDYIEFTRILKHG 535 (542)
Q Consensus 508 ~i~~l~~~~D~-~dG~Is~~EF~~~l~~~ 535 (542)
-+.+|+.+|. .|..|+.+||++--.+.
T Consensus 298 -REHVMk~vDtNqDRlvtleEFL~~t~~k 325 (442)
T KOG3866|consen 298 -REHVMKQVDTNQDRLVTLEEFLNDTDNK 325 (442)
T ss_pred -HHHHHHhcccchhhhhhHHHHHhhhhhc
Confidence 5668999999 99999999999876543
No 172
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=78.71 E-value=0.86 Score=45.72 Aligned_cols=64 Identities=11% Similarity=0.111 Sum_probs=44.8
Q ss_pred hhhccccccCCCCCCcccccc--cccccc-----cccccccchhhhhhhhHhhhc----ccc-----hhhhhhhhhhhhc
Q psy15785 258 SINLDSDLLDTPDFYWERDDL--ENLYLQ-----TCNYFSISRRTKMISRIYICR----RVT-----TSASRDEQSVCYS 321 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l--e~ly~~-----~~~~~eIs~r~k~L~r~~l~~----r~t-----a~~~l~h~w~~~~ 321 (542)
.++++.++.|.|||...+... +.+... ......+++.+.+|+++|+.. |++ +.++++|||+...
T Consensus 188 Gvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05631 188 GCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNI 267 (285)
T ss_pred HHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCC
Confidence 567888889999998765431 111111 112235888999999888876 876 8999999999663
No 173
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=78.53 E-value=1.1 Score=46.13 Aligned_cols=63 Identities=11% Similarity=0.135 Sum_probs=44.5
Q ss_pred hhhccccccCCCCCCccccc--ccccccccccc--cccchhhhhhhhHhhhc----cc----chhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQTCNY--FSISRRTKMISRIYICR----RV----TTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~~~~~--~eIs~r~k~L~r~~l~~----r~----ta~~~l~h~w~~~ 320 (542)
.++++.+++|.+||...+.. +..+......+ ..+++.+++|++.++.. |+ ++.+++.|||+..
T Consensus 184 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~ 258 (330)
T cd05586 184 GVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFAD 258 (330)
T ss_pred ccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccC
Confidence 56888999999999876543 12221111111 24788899999888877 76 7889999999965
No 174
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=78.47 E-value=1.2 Score=45.16 Aligned_cols=70 Identities=10% Similarity=-0.046 Sum_probs=48.8
Q ss_pred hhHHHHHhhhhccccccCCCCCCccccccc--cc----ccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDDLE--NL----YLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVC 319 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~le--~l----y~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~ 319 (542)
..++.+ .++++..+.|.|||...++.-. .+ .-.......+++.+++|+++++.. |+++.+++.|||+.
T Consensus 196 ~Dv~sl--Gvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~ 273 (296)
T cd06655 196 VDIWSL--GIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 273 (296)
T ss_pred hhHHHH--HHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhh
Confidence 344444 6778888999999987665311 01 111223456788888999888766 99999999999997
Q ss_pred hc
Q psy15785 320 YS 321 (542)
Q Consensus 320 ~~ 321 (542)
..
T Consensus 274 ~~ 275 (296)
T cd06655 274 LA 275 (296)
T ss_pred hc
Confidence 63
No 175
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=78.20 E-value=1.1 Score=47.12 Aligned_cols=63 Identities=14% Similarity=0.100 Sum_probs=46.3
Q ss_pred hhhccccccCCCCCCccccc--cccc-----ccccccccccchhhhhhhhHhhhc------ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENL-----YLQTCNYFSISRRTKMISRIYICR------RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~l-----y~~~~~~~eIs~r~k~L~r~~l~~------r~ta~~~l~h~w~~~ 320 (542)
.++++.++.|.|||...+.. +..+ .........+++.+++|+..++.. |+++.++++|||++.
T Consensus 234 Gvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~ 309 (371)
T cd05622 234 GVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN 309 (371)
T ss_pred hHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCC
Confidence 56788889999999877653 1111 123344557899999999877753 678999999999966
No 176
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=78.18 E-value=1.3 Score=43.07 Aligned_cols=67 Identities=7% Similarity=-0.011 Sum_probs=43.7
Q ss_pred hhHHHHHhhhhccccccCCCCCCcccccccccc--ccc----ccccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDDLENLY--LQT----CNYFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~le~ly--~~~----~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
+.++.+ .++++.++.|.|||.+..+.-.... ... ..-..++..+.++++.++.. |+|+.+++.|||+
T Consensus 180 ~Di~s~--G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 180 ADIWSL--GITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred hhHHHH--HHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 344444 5667778889999987665421111 011 11123567788888877765 9999999999996
No 177
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=78.05 E-value=1.6 Score=45.61 Aligned_cols=63 Identities=14% Similarity=0.095 Sum_probs=43.7
Q ss_pred hhhccccccCCCCCCcccccc--ccc-----ccccccccccchhhhhhhhHhhhc---cc---chhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL--ENL-----YLQTCNYFSISRRTKMISRIYICR---RV---TTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l--e~l-----y~~~~~~~eIs~r~k~L~r~~l~~---r~---ta~~~l~h~w~~~ 320 (542)
.++++.+++|.|||...++.. ..+ .........+++.+++|+.+++.. |+ ++.+++.|||+..
T Consensus 223 Gvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~p~~R~~~~~~~ei~~hp~f~~ 298 (360)
T cd05627 223 GVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCTDSENRIGSNGVEEIKSHPFFEG 298 (360)
T ss_pred cceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhccChhhcCCCCCHHHHhcCCCCCC
Confidence 568888999999998776641 111 112233456899999998655432 65 5789999999975
No 178
>PLN02952 phosphoinositide phospholipase C
Probab=78.03 E-value=11 Score=42.31 Aligned_cols=61 Identities=23% Similarity=0.379 Sum_probs=44.1
Q ss_pred CCCCcchhhhHHHHhhhc-CCCCcHHHHHHHHhhhCCCCCCcccHHHHHHHHHHcC-C-CCCHHH
Q psy15785 408 APGPINFTMFLTLFGDRL-QGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMG-D-RFTDED 469 (542)
Q Consensus 408 ~dG~Idf~EFl~~~~~~~-~~~~~~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g-~-~ls~~e 469 (542)
+.|.++|.+|..+..... .......++..+|..+-. +.+.++.++|...|.... . ..+.++
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~-~~~~mt~~~l~~FL~~~Q~e~~~~~~~ 76 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSV-GGGHMGADQLRRFLVLHQDELDCTLAE 76 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhC-CCCccCHHHHHHHHHHhCCCcCCCHHH
Confidence 468999999987766432 223357889999999964 447899999999998753 2 244444
No 179
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=77.80 E-value=1.3 Score=44.90 Aligned_cols=27 Identities=7% Similarity=0.193 Sum_probs=21.9
Q ss_pred chhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 292 SRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 292 s~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
+..+.+|+++|+.. |+|+.+++.|||+
T Consensus 287 ~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 287 DSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred ChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 34566677777776 9999999999996
No 180
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=77.59 E-value=1.3 Score=44.68 Aligned_cols=71 Identities=13% Similarity=0.121 Sum_probs=47.9
Q ss_pred hhHHHHHhhhhccccccCCCCCCccccc--ccc----cccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDD--LEN----LYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVC 319 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~--le~----ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~ 319 (542)
+.++.+ .++++..+.|.+||...++. +.. +-.....-..++..++.++++++.. |+|+.+++.|||+.
T Consensus 199 ~Dv~sl--Gvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~ 276 (292)
T cd06658 199 VDIWSL--GIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLK 276 (292)
T ss_pred hhHHHH--HHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhh
Confidence 455555 67788888999998876543 111 1111122234677788888777766 99999999999998
Q ss_pred hcc
Q psy15785 320 YSI 322 (542)
Q Consensus 320 ~~~ 322 (542)
...
T Consensus 277 ~~~ 279 (292)
T cd06658 277 LAG 279 (292)
T ss_pred ccC
Confidence 633
No 181
>cd00652 TBP_TLF TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA. New members of the TBP family, called TBP-like proteins (TBLP, TLF, TLP) or TBP-related factors (TRF1, TRF2,TRP), are similar to the core domain of TBPs, with identical or chemically similar amino acids at many
Probab=77.59 E-value=9 Score=36.17 Aligned_cols=72 Identities=17% Similarity=0.204 Sum_probs=49.4
Q ss_pred EEEEEeccccChhhHHhhhhcCCccceecccccccCCCCceEEEeeeccCCCCceEEEEcCCcEEEecCCH-HHHHHHHH
Q psy15785 4 VVAFSTAQEYDIDNLKKGIVGKDLYELIEFDDNMQNGENSIQVIAKYQVGKEPRFIYFFQEGSLVAWNVSD-LEIENLLE 82 (542)
Q Consensus 4 v~a~~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~F~~G~vV~w~~~~-~~~~~~l~ 82 (542)
|..+++.-.+||+.|+..+...--|+|-+|+-- + |......-.+-+|+.|.||+-|... ++....++
T Consensus 99 vas~~l~~~i~L~~la~~~~~~~~YePe~fpgl----------i--~r~~~pk~t~lIF~sGkvvitGaks~~~~~~a~~ 166 (174)
T cd00652 99 VASCDLGFPIRLEELALKHPENASYEPELFPGL----------I--YRMDEPKVVLLIFVSGKIVITGAKSREDIYEAVE 166 (174)
T ss_pred EEEEECCCcccHHHHHhhhhcccEECCccCceE----------E--EEecCCcEEEEEEcCCEEEEEecCCHHHHHHHHH
Confidence 456678889999999988754445666554421 1 3323344678999999999999874 55666676
Q ss_pred HHHHh
Q psy15785 83 FLKQF 87 (542)
Q Consensus 83 ~l~~~ 87 (542)
.+.+.
T Consensus 167 ~i~~~ 171 (174)
T cd00652 167 KIYPI 171 (174)
T ss_pred HHHHH
Confidence 66553
No 182
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=77.34 E-value=1.2 Score=43.93 Aligned_cols=67 Identities=12% Similarity=0.013 Sum_probs=43.3
Q ss_pred hhHHHHHhhhhccccccCCCCCCccccccc-----ccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDDLE-----NLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~le-----~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
+.+..+ .++++.++.|.|||.-..+... .-.........++..+.+|.+.++.. |+|+.++++|||+
T Consensus 197 ~Dv~sl--Gv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 197 SDLWSL--GITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred hhHHHH--HHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 444444 5677788889998854332210 11111112235677888898888775 9999999999996
No 183
>cd04517 TLF TBP-like factors (TLF; also called TLP, TRF, TRP), which are found in most metazoans. TLFs and TBPs have well-conserved core domains; however, they only share about 60% similarity. TLFs, like TBPs, interact with TFIIA and TFIIB, which are part of the basal transcription machinery. Yet, in contrast to TBPs, TLFs seem not to interact with the TATA-box and even have a negative effect on the transcription of TATA-containing promoters. Recent results indicate that TLFs are involved in the transcription via TATA-less promoters.
Probab=77.15 E-value=8 Score=36.54 Aligned_cols=71 Identities=14% Similarity=0.166 Sum_probs=48.0
Q ss_pred EEEEeccccChhhHHhhhhcCCccceecccccccCCCCceEEEeeeccCCCCceEEEEcCCcEEEecCCH-HHHHHHHHH
Q psy15785 5 VAFSTAQEYDIDNLKKGIVGKDLYELIEFDDNMQNGENSIQVIAKYQVGKEPRFIYFFQEGSLVAWNVSD-LEIENLLEF 83 (542)
Q Consensus 5 ~a~~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~F~~G~vV~w~~~~-~~~~~~l~~ 83 (542)
..++..-.+||+.|+......-.|+|-.|+-- + |...+..-.+-+|+.|.||+-|... ++....++.
T Consensus 100 at~~~~~~i~L~~la~~~~~~~~YePE~fPgl----------i--yr~~~p~~t~lIF~sGkivitGaks~~~~~~a~~~ 167 (174)
T cd04517 100 ATCSMPFPIRLDELAAKNRSSASYEPELHPGV----------V--YRITGPRATLSIFSTGSVTVTGARSMEDVREAVEK 167 (174)
T ss_pred EEEeCCCcccHHHHHHhchhhcEeCCccCCEE----------E--EEECCCcEEEEEeCCCEEEEEecCCHHHHHHHHHH
Confidence 45568889999999975433344665544421 1 3323344578899999999999775 677777777
Q ss_pred HHHh
Q psy15785 84 LKQF 87 (542)
Q Consensus 84 l~~~ 87 (542)
+.+.
T Consensus 168 i~pi 171 (174)
T cd04517 168 IYPI 171 (174)
T ss_pred HHHH
Confidence 7654
No 184
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=77.14 E-value=1.4 Score=44.59 Aligned_cols=63 Identities=14% Similarity=-0.012 Sum_probs=43.8
Q ss_pred hhhccccccCCCCCCcccccccccccc-------cccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhhc
Q psy15785 258 SINLDSDLLDTPDFYWERDDLENLYLQ-------TCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCYS 321 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~le~ly~~-------~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~ 321 (542)
.++++..+.|.|||...++.. .++.. ......++..+++|+++++.. |+++.++++|||+...
T Consensus 202 Gvil~~l~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 275 (297)
T cd06656 202 GIMAIEMVEGEPPYLNENPLR-ALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLA 275 (297)
T ss_pred HHHHHHHHhCCCCCCCCCcch-heeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccc
Confidence 567788889999997765531 11110 112234667778888777765 9999999999999763
No 185
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=77.09 E-value=1.3 Score=44.45 Aligned_cols=65 Identities=17% Similarity=0.146 Sum_probs=45.7
Q ss_pred hhhccccccCCCCCCccccc--cc----ccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhhcc
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LE----NLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCYSI 322 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le----~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~~ 322 (542)
.++++..++|.|||+..++. .. ........-..++..+.++++.|+.. |+++.+++.|||+....
T Consensus 202 Gv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 276 (285)
T cd06648 202 GIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAG 276 (285)
T ss_pred HHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCC
Confidence 66778888999999876653 11 11111112223678889999888866 99999999999997744
No 186
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=77.04 E-value=0.81 Score=45.49 Aligned_cols=67 Identities=7% Similarity=0.042 Sum_probs=44.7
Q ss_pred hhHHHHHhhhhccccccCCCCCCccccc--cccccc---------------------cccc---------ccccchhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDD--LENLYL---------------------QTCN---------YFSISRRTKM 297 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~--le~ly~---------------------~~~~---------~~eIs~r~k~ 297 (542)
+.+..+ .++++..+.|.+||.++++. +.+++. .... ...+++..++
T Consensus 182 ~Dv~sl--G~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (284)
T cd07860 182 VDIWSL--GCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRD 259 (284)
T ss_pred HHHHHH--HHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHH
Confidence 455554 67788888999999876542 000000 0000 1246777888
Q ss_pred hhhHhhhc----ccchhhhhhhhhh
Q psy15785 298 ISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 298 L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
++++|+.. |+|+.+++.|||+
T Consensus 260 li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 260 LLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred HHHHhcCCCcccCCCHHHHhcCCCC
Confidence 88888876 9999999999996
No 187
>cd04516 TBP_eukaryotes eukaryotic TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=76.74 E-value=9.2 Score=36.13 Aligned_cols=72 Identities=21% Similarity=0.193 Sum_probs=48.5
Q ss_pred EEEEEeccccChhhHHhhhhcCCccceecccccccCCCCceEEEeeeccCCCCceEEEEcCCcEEEecC-CHHHHHHHHH
Q psy15785 4 VVAFSTAQEYDIDNLKKGIVGKDLYELIEFDDNMQNGENSIQVIAKYQVGKEPRFIYFFQEGSLVAWNV-SDLEIENLLE 82 (542)
Q Consensus 4 v~a~~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~F~~G~vV~w~~-~~~~~~~~l~ 82 (542)
|..+++.-.+||+.|+......-.|+|-.|+.- + |......-.+-+|..|-||+=|. ++++....++
T Consensus 98 vat~~l~~~i~L~~la~~~~~~~~YePE~fPgl----------i--yr~~~pk~~~liF~sGkvvitGaks~~~~~~a~~ 165 (174)
T cd04516 98 VGSCDVKFPIRLEGLAHAHKQFSSYEPELFPGL----------I--YRMVKPKIVLLIFVSGKIVLTGAKSREEIYQAFE 165 (174)
T ss_pred EEEEECCCcccHHHHHHhChhccEeCCccCceE----------E--EEecCCcEEEEEeCCCEEEEEecCCHHHHHHHHH
Confidence 455678889999999975433344555444421 1 33333445688999999999998 5666777777
Q ss_pred HHHHh
Q psy15785 83 FLKQF 87 (542)
Q Consensus 83 ~l~~~ 87 (542)
.+.+.
T Consensus 166 ~i~p~ 170 (174)
T cd04516 166 NIYPI 170 (174)
T ss_pred HHHHH
Confidence 77654
No 188
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=76.66 E-value=1 Score=46.20 Aligned_cols=63 Identities=17% Similarity=0.170 Sum_probs=44.0
Q ss_pred hhhccccccCCCCCCccccc--ccccccccccc-cccchhhhhhhhHhhhc----ccch------hhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQTCNY-FSISRRTKMISRIYICR----RVTT------SASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~~~~~-~eIs~r~k~L~r~~l~~----r~ta------~~~l~h~w~~~ 320 (542)
.++++.+++|.|||...++. ++.+......+ ..+++.+++|++.++.. |+++ .+++.|||+..
T Consensus 183 G~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~ 258 (320)
T cd05590 183 GVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKE 258 (320)
T ss_pred HHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCC
Confidence 56788889999999776543 12221111111 23788899999888876 9998 88999999965
No 189
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=76.63 E-value=1.3 Score=44.91 Aligned_cols=63 Identities=16% Similarity=0.122 Sum_probs=44.7
Q ss_pred hhhccccccCCCCCCccccc--cccccc---ccccccccchhhhhhhhHhhhc----ccc----hhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYL---QTCNYFSISRRTKMISRIYICR----RVT----TSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~---~~~~~~eIs~r~k~L~r~~l~~----r~t----a~~~l~h~w~~~ 320 (542)
.+.++..++|.+||...+.. +..+.. .......+++.++.+++.|+.+ |+| +.+++.|||++.
T Consensus 219 G~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~ 294 (316)
T cd05574 219 GILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRG 294 (316)
T ss_pred HHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhc
Confidence 56677788999998766543 111111 1122233788899999988877 999 999999999976
No 190
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=76.61 E-value=1.2 Score=45.65 Aligned_cols=63 Identities=10% Similarity=0.074 Sum_probs=44.9
Q ss_pred hhhccccccCCCCCCccccc--ccccccc-cccccccchhhhhhhhHhhhc----cc-----chhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQ-TCNYFSISRRTKMISRIYICR----RV-----TTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~-~~~~~eIs~r~k~L~r~~l~~----r~-----ta~~~l~h~w~~~ 320 (542)
.++++.++.|.|||...+.. +..+... ..--..+++.+++|+++++.. |+ ++.+++.|||+..
T Consensus 187 G~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~ 261 (323)
T cd05584 187 GALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRH 261 (323)
T ss_pred HHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCC
Confidence 56788889999999876653 1111111 111234788899999888876 88 8999999999965
No 191
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=76.49 E-value=1.7 Score=44.89 Aligned_cols=63 Identities=14% Similarity=0.145 Sum_probs=44.7
Q ss_pred hhhccccccCCCCCCccccc--ccccc-----cc-cccccccchhhhhhhhHhhhc------ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLY-----LQ-TCNYFSISRRTKMISRIYICR------RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly-----~~-~~~~~eIs~r~k~L~r~~l~~------r~ta~~~l~h~w~~~ 320 (542)
.++++.+++|.+||...+.. +..+. .. ...+.++++.+++|++++++. |.++.++++|||+..
T Consensus 195 Gvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~ 271 (331)
T cd05624 195 GVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEG 271 (331)
T ss_pred ehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCC
Confidence 56788889999999876643 11111 11 123456899999999777765 468899999999865
No 192
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=76.30 E-value=1.2 Score=45.56 Aligned_cols=63 Identities=14% Similarity=0.258 Sum_probs=44.3
Q ss_pred hhhccccccCCCCCCccccc--ccccccccccc-cccchhhhhhhhHhhhc----cc-------chhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQTCNY-FSISRRTKMISRIYICR----RV-------TTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~~~~~-~eIs~r~k~L~r~~l~~----r~-------ta~~~l~h~w~~~ 320 (542)
.++++.++.|.|||...++. ++.+......+ ..+++.+.+|++.++.. |+ ++.+++.|||+..
T Consensus 183 G~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~ 259 (321)
T cd05591 183 GVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE 259 (321)
T ss_pred hHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCC
Confidence 56778888999999887754 12222111111 23678888999888876 88 8999999999955
No 193
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=76.21 E-value=7.7 Score=35.84 Aligned_cols=35 Identities=20% Similarity=0.451 Sum_probs=24.0
Q ss_pred HHHHhhh---CCCCCCcccHHHHHHHHHHcC---CCCCHHH
Q psy15785 435 KNAFGCF---DEDNSGIINEERLRELLTSMG---DRFTDED 469 (542)
Q Consensus 435 ~~aF~~~---D~d~~G~Is~eEL~~~L~~~g---~~ls~~e 469 (542)
+.+|..| -..+...++...|..+++..| ..++..+
T Consensus 2 ~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~td 42 (154)
T PF05517_consen 2 EAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTD 42 (154)
T ss_dssp HHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHH
T ss_pred HHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHH
Confidence 3445554 445667899999999999865 3567766
No 194
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=76.10 E-value=1.1 Score=45.74 Aligned_cols=63 Identities=16% Similarity=0.117 Sum_probs=43.6
Q ss_pred hhhccccccCCCCCCccccc--cccccc-ccccccccchhhhhhhhHhhhc----cc---chhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYL-QTCNYFSISRRTKMISRIYICR----RV---TTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~-~~~~~~eIs~r~k~L~r~~l~~----r~---ta~~~l~h~w~~~ 320 (542)
.++++.++.|.|||...+.. +..+.. ...-...+++.+++|+++|+.. |+ ++.+++.|||+..
T Consensus 180 Gvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~ 252 (312)
T cd05585 180 GVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQ 252 (312)
T ss_pred hHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCC
Confidence 56788889999999765543 111111 1112245788899999888876 86 5789999999975
No 195
>KOG0035|consensus
Probab=75.94 E-value=6.3 Score=45.85 Aligned_cols=39 Identities=23% Similarity=0.249 Sum_probs=35.0
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHH
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDED 469 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e 469 (542)
..++++.|..+|+...|..+.+++...|.++|.....++
T Consensus 746 ~~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee 784 (890)
T KOG0035|consen 746 LDELRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEE 784 (890)
T ss_pred HHHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhH
Confidence 467899999999999999999999999999998877654
No 196
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=75.86 E-value=0.91 Score=45.37 Aligned_cols=29 Identities=10% Similarity=0.051 Sum_probs=24.9
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
++++.+++|+++|+.. |+|+.++++|||+
T Consensus 258 ~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 258 DIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred CCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 4667778888888877 9999999999996
No 197
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=75.85 E-value=7.8 Score=36.37 Aligned_cols=98 Identities=14% Similarity=0.167 Sum_probs=60.0
Q ss_pred HHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhh---hhc--------------------c
Q psy15785 432 DVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDL---LSS--------------------H 488 (542)
Q Consensus 432 ~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~---~~~--------------------~ 488 (542)
..|++=-.-||+|+||.|.+-|--.-++.+|..+--.-+.--+++......-. ++. .
T Consensus 7 T~LQqHvaFFDrd~DGiI~P~dTy~GFraLGf~~~~s~~aa~~I~~~lSy~T~~~w~p~P~f~Iyi~nIhk~kHGSDSg~ 86 (174)
T PF05042_consen 7 TVLQQHVAFFDRDKDGIIYPWDTYQGFRALGFGILLSLLAAFIIHGALSYPTQPSWIPDPFFRIYIKNIHKGKHGSDSGA 86 (174)
T ss_pred cHHhhhhceeCCCCCeeECHHHHHHHHHHhCCCHHHHHHHHHHHHcccCCccCCCCCCCCceeEEeecccccccCCCccc
Confidence 34555566799999999999999999999886543222111111111111000 000 0
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHhCCC-CCCceeHHHHHHHHhcCCCC
Q psy15785 489 LSDKHHIRLEWMIIVLIMIEVDEMYREAPI-KNGMFDYIEFTRILKHGAKD 538 (542)
Q Consensus 489 ~~~~~~~~~~~Fv~~~~~~~i~~l~~~~D~-~dG~Is~~EF~~~l~~~~~~ 538 (542)
|+.+|+..- ..++++|..++. +.+.+++.|..+|++.+..-
T Consensus 87 YD~eGrFvp---------~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~~ 128 (174)
T PF05042_consen 87 YDTEGRFVP---------QKFEEIFSKYAKTGPDALTLRELWRMLKGNRNA 128 (174)
T ss_pred cccCCcCCH---------HHHHHHHHHhCCCCCCCcCHHHHHHHHHhcccc
Confidence 012222111 128889999999 88999999999999987653
No 198
>KOG4717|consensus
Probab=75.43 E-value=1.2 Score=48.54 Aligned_cols=64 Identities=13% Similarity=0.046 Sum_probs=48.3
Q ss_pred hhhhccccccCCCCCCccccc--c-cccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 257 HSINLDSDLLDTPDFYWERDD--L-ENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 257 ~~v~l~~~Lld~P~f~w~~~~--l-e~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
-.|+||.++||.|||---++. + --+.-+..-=..+|...++|+..||++ |.+..++..|+|++.
T Consensus 205 LGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~ 275 (864)
T KOG4717|consen 205 LGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQA 275 (864)
T ss_pred HHHHHHHHHhCCCccccccchhhhhhhhcccccCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccC
Confidence 368999999999999876654 2 111111122246899999999999998 889999999999975
No 199
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=75.28 E-value=1.6 Score=44.08 Aligned_cols=70 Identities=17% Similarity=0.140 Sum_probs=47.7
Q ss_pred hHHHHHhhhhccccccCCCCCCcccccc------cccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 251 QLFALRHSINLDSDLLDTPDFYWERDDL------ENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 251 ~l~~~r~~v~l~~~Lld~P~f~w~~~~l------e~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.++.+ .++++..++|.|||.+..... ..+.........++....++..+|+.. |+++.+++.|||+..
T Consensus 198 Dv~sl--Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~ 275 (292)
T cd06657 198 DIWSL--GIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 275 (292)
T ss_pred hHHHH--HHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhc
Confidence 44444 577777888999998765431 112112222335677888888888766 999999999999977
Q ss_pred cc
Q psy15785 321 SI 322 (542)
Q Consensus 321 ~~ 322 (542)
..
T Consensus 276 ~~ 277 (292)
T cd06657 276 AG 277 (292)
T ss_pred cC
Confidence 44
No 200
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=75.21 E-value=1.3 Score=44.49 Aligned_cols=63 Identities=11% Similarity=0.185 Sum_probs=43.2
Q ss_pred hhhccccccCCCCCCcccccc-----cccccc--cccccccchhhhhhhhHhhhc----ccc-----hhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL-----ENLYLQ--TCNYFSISRRTKMISRIYICR----RVT-----TSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l-----e~ly~~--~~~~~eIs~r~k~L~r~~l~~----r~t-----a~~~l~h~w~~~ 320 (542)
.+.++.++.|.|||.+..... ..+... ......+++.+++|++.++.. |+| +.++++|||+..
T Consensus 188 G~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~ 266 (285)
T cd05630 188 GCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ 266 (285)
T ss_pred HHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence 457788889999998754321 111110 111234777889999888876 998 899999999964
No 201
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=75.21 E-value=4.2 Score=45.69 Aligned_cols=26 Identities=8% Similarity=-0.028 Sum_probs=22.2
Q ss_pred hhhhhHhhhc----ccchhhhhhhhhhhhc
Q psy15785 296 KMISRIYICR----RVTTSASRDEQSVCYS 321 (542)
Q Consensus 296 k~L~r~~l~~----r~ta~~~l~h~w~~~~ 321 (542)
.+|++.||.. |+|+.++|+|||+...
T Consensus 427 ~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~ 456 (566)
T PLN03225 427 WELLKSMMRFKGRQRISAKAALAHPYFDRE 456 (566)
T ss_pred HHHHHHHccCCcccCCCHHHHhCCcCcCCC
Confidence 4788888876 9999999999999763
No 202
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=74.64 E-value=1.7 Score=44.09 Aligned_cols=32 Identities=9% Similarity=0.026 Sum_probs=27.0
Q ss_pred cchhhhhhhhHhhhc----ccchhhhhhhhhhhhcc
Q psy15785 291 ISRRTKMISRIYICR----RVTTSASRDEQSVCYSI 322 (542)
Q Consensus 291 Is~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~~ 322 (542)
+++.+.+|+++|+.. |+|+.+++.|||+....
T Consensus 262 ~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~ 297 (309)
T cd07845 262 LSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKP 297 (309)
T ss_pred cCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCC
Confidence 577788899888886 99999999999997533
No 203
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=74.43 E-value=1.7 Score=42.77 Aligned_cols=61 Identities=10% Similarity=-0.025 Sum_probs=40.7
Q ss_pred hhhccccccCCCCCCcccccccccc-----ccc-ccccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDLENLY-----LQT-CNYFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~le~ly-----~~~-~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.++++..+.+.|||.+........+ -.. .-...+++.++.|.+.++.. |+|+.+++.|||+
T Consensus 198 Gvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 198 GCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred HHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 5677778889999876443211111 111 11234677888888877755 9999999999996
No 204
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=74.16 E-value=1.2 Score=44.54 Aligned_cols=31 Identities=10% Similarity=0.005 Sum_probs=26.7
Q ss_pred cccchhhhhhhhHhhhc----ccchhhhhhhhhhh
Q psy15785 289 FSISRRTKMISRIYICR----RVTTSASRDEQSVC 319 (542)
Q Consensus 289 ~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~ 319 (542)
..+++.+.+|+++++.. |+++.+++.|||++
T Consensus 261 ~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 261 PDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred cccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 35788899999888876 99999999999974
No 205
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=73.90 E-value=1.8 Score=44.41 Aligned_cols=63 Identities=14% Similarity=0.105 Sum_probs=44.3
Q ss_pred hhhccccccCCCCCCccccc--ccccc-cccccccccchhhhhhhhHhhhc----ccch----hhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLY-LQTCNYFSISRRTKMISRIYICR----RVTT----SASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly-~~~~~~~eIs~r~k~L~r~~l~~----r~ta----~~~l~h~w~~~ 320 (542)
.++++.+++|.|||...+.. ...+. ........+++.+.+|++.++.. |+++ .++++|||+..
T Consensus 183 G~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~ 256 (323)
T cd05575 183 GAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSS 256 (323)
T ss_pred chhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCC
Confidence 56788889999999876543 11111 11222345788899999888877 8887 58999999865
No 206
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=73.19 E-value=1.8 Score=44.62 Aligned_cols=63 Identities=10% Similarity=0.076 Sum_probs=44.0
Q ss_pred hhhccccccCCCCCCccccc--cccccc-ccccccccchhhhhhhhHhhhc----cc-----chhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYL-QTCNYFSISRRTKMISRIYICR----RV-----TTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~-~~~~~~eIs~r~k~L~r~~l~~----r~-----ta~~~l~h~w~~~ 320 (542)
.++++.++.|.+||...+.. ...+.. ...--..+++.+++|+++++.. |+ ++.++++|||+..
T Consensus 182 Gvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~ 256 (328)
T cd05593 182 GVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTG 256 (328)
T ss_pred chHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 56788889999999765543 111111 1111135788999999888877 76 8999999999965
No 207
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=73.17 E-value=1.4 Score=45.12 Aligned_cols=63 Identities=21% Similarity=0.224 Sum_probs=43.2
Q ss_pred hhhccccccCCCCCCccccc--cccccccccccc-ccchhhhhhhhHhhhc----ccch-hhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQTCNYF-SISRRTKMISRIYICR----RVTT-SASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~~~~~~-eIs~r~k~L~r~~l~~----r~ta-~~~l~h~w~~~ 320 (542)
.++++.+++|.+||...++. .+.+......+. .++..+++|++.++.. |+++ .++++|||+..
T Consensus 183 Gvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~ 253 (316)
T cd05620 183 GVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKT 253 (316)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCC
Confidence 56788889999999766543 122221111111 2678889999888876 9987 47888999965
No 208
>cd00652 TBP_TLF TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA. New members of the TBP family, called TBP-like proteins (TBLP, TLF, TLP) or TBP-related factors (TRF1, TRF2,TRP), are similar to the core domain of TBPs, with identical or chemically similar amino acids at many
Probab=73.16 E-value=14 Score=34.88 Aligned_cols=70 Identities=16% Similarity=0.185 Sum_probs=46.1
Q ss_pred EEEEEE-eccccChhhHHhhhhcCCccceecccccccCCCCceEEEeeeccCCCCceEEEEcCCcEEEecC-CHHHHHHH
Q psy15785 3 NVVAFS-TAQEYDIDNLKKGIVGKDLYELIEFDDNMQNGENSIQVIAKYQVGKEPRFIYFFQEGSLVAWNV-SDLEIENL 80 (542)
Q Consensus 3 ~v~a~~-~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~F~~G~vV~w~~-~~~~~~~~ 80 (542)
+|+|-+ +...+||.+|+..+.. --|+|-+|+- +. |........+-+|++|.+|+=|. +.++....
T Consensus 6 NvVas~~l~~~idL~~la~~~~n-~~YePe~fpg--------li----~R~~~P~~t~lIf~sGKivitGaks~~~~~~a 72 (174)
T cd00652 6 NIVATVNLGCELDLRKIALAARN-AEYNPKRFPG--------VI----MRLREPKTTALIFSSGKMVITGAKSEEDAKLA 72 (174)
T ss_pred EEEEEEEcCCccCHHHHHhhCCC-cEECCCccce--------EE----EEcCCCcEEEEEECCCEEEEEecCCHHHHHHH
Confidence 344444 7889999999988754 2366655442 11 22223456789999999999996 66666655
Q ss_pred HHHHH
Q psy15785 81 LEFLK 85 (542)
Q Consensus 81 l~~l~ 85 (542)
++.+.
T Consensus 73 ~~~~~ 77 (174)
T cd00652 73 ARKYA 77 (174)
T ss_pred HHHHH
Confidence 55543
No 209
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=73.02 E-value=1.5 Score=42.71 Aligned_cols=63 Identities=13% Similarity=0.129 Sum_probs=42.1
Q ss_pred hhhccccccCCCCCCccccc--ccccccccccc---cccchhhhhhhhHhhhc----ccch---hhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQTCNY---FSISRRTKMISRIYICR----RVTT---SASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~~~~~---~eIs~r~k~L~r~~l~~----r~ta---~~~l~h~w~~~ 320 (542)
.+.++..+.|.|||....+. ...+......| ..++..+..+++.|+.. |+|+ .++++|||++.
T Consensus 188 G~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~ 262 (265)
T cd05579 188 GCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKG 262 (265)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccC
Confidence 45566677899998776653 11111111122 22478889999888866 9999 99999999964
No 210
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=72.96 E-value=1.5 Score=44.95 Aligned_cols=63 Identities=13% Similarity=0.158 Sum_probs=44.1
Q ss_pred hhhccccccCCCCCCccccc--cccccccccc-ccccchhhhhhhhHhhhc----ccch-----hhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQTCN-YFSISRRTKMISRIYICR----RVTT-----SASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~~~~-~~eIs~r~k~L~r~~l~~----r~ta-----~~~l~h~w~~~ 320 (542)
.++++.+++|.+||...+.. ...+...... -..+++.+.+|+++|+.. |+++ .+++.|||+..
T Consensus 183 Gvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~ 257 (318)
T cd05570 183 GVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFRE 257 (318)
T ss_pred HHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 56778888999998765543 1111111111 124788889999888877 9999 99999999965
No 211
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=72.91 E-value=1.9 Score=43.47 Aligned_cols=67 Identities=16% Similarity=0.077 Sum_probs=45.7
Q ss_pred hHHHHHhhhhccccccCCCCCCccccccccccc-------ccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhh
Q psy15785 251 QLFALRHSINLDSDLLDTPDFYWERDDLENLYL-------QTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVC 319 (542)
Q Consensus 251 ~l~~~r~~v~l~~~Lld~P~f~w~~~~le~ly~-------~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~ 319 (542)
.++.+ .++++.++.|.|||....+.. .++. .......++..+++|+++++.. |+|+.+++.|||+.
T Consensus 198 Dv~s~--Gvil~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~ 274 (296)
T cd06654 198 DIWSL--GIMAIEMIEGEPPYLNENPLR-ALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274 (296)
T ss_pred hHHHH--HHHHHHHHhCCCCCCCCCHHH-hHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhh
Confidence 44444 567777889999997665531 1111 1112235677788888888765 99999999999986
Q ss_pred h
Q psy15785 320 Y 320 (542)
Q Consensus 320 ~ 320 (542)
.
T Consensus 275 ~ 275 (296)
T cd06654 275 I 275 (296)
T ss_pred c
Confidence 5
No 212
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=72.77 E-value=1.8 Score=42.88 Aligned_cols=67 Identities=6% Similarity=0.010 Sum_probs=45.4
Q ss_pred hhHHHHHhhhhccccccCCCCCCccccccc-----------------------ccccc---------cccccccchhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDDLE-----------------------NLYLQ---------TCNYFSISRRTKM 297 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~le-----------------------~ly~~---------~~~~~eIs~r~k~ 297 (542)
+.++.+ .+.++.++.|.|||.+.++..+ .+... ......++..+.+
T Consensus 181 ~Di~sl--G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (283)
T cd07835 181 VDIWSI--GCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLD 258 (283)
T ss_pred HHHHHH--HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHH
Confidence 455555 6788888899999977654200 00000 0112456778888
Q ss_pred hhhHhhhc----ccchhhhhhhhhh
Q psy15785 298 ISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 298 L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
++++|+.. |+|..+++.|||+
T Consensus 259 li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 259 LLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred HHHHHhcCChhhCcCHHHHhcCCCC
Confidence 99888877 9999999999996
No 213
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=72.24 E-value=2.2 Score=42.30 Aligned_cols=70 Identities=13% Similarity=-0.009 Sum_probs=45.6
Q ss_pred hhHHHHHhhhhccccccCCCCCCccccc--cccccc----ccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDD--LENLYL----QTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVC 319 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~--le~ly~----~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~ 319 (542)
+.++.+ .++++..+.|.|||...++. +..+.. ....-..++..+.++++.++.. |+++.+++.|||+.
T Consensus 189 sDi~sl--G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~ 266 (280)
T cd06611 189 ADIWSL--GITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVS 266 (280)
T ss_pred ccHHHH--HHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhc
Confidence 344444 56777788999998655432 111111 1111224567888888888766 99999999999996
Q ss_pred hc
Q psy15785 320 YS 321 (542)
Q Consensus 320 ~~ 321 (542)
..
T Consensus 267 ~~ 268 (280)
T cd06611 267 DQ 268 (280)
T ss_pred cc
Confidence 53
No 214
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=72.20 E-value=3 Score=41.17 Aligned_cols=71 Identities=7% Similarity=-0.018 Sum_probs=45.7
Q ss_pred hhHHHHHhhhhccccccCCCCCCccccccc-----ccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDDLE-----NLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~le-----~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
+.+..+ .+.++.++.|.|||...++.-. ...........++..+.++.+.++.. |+++.+++.|||++.
T Consensus 183 ~Dv~sl--G~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~ 260 (277)
T cd06917 183 ADIWSL--GITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKA 260 (277)
T ss_pred hhHHHH--HHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhc
Confidence 344444 6677888899999865544211 11111111223667788888887765 999999999999976
Q ss_pred cc
Q psy15785 321 SI 322 (542)
Q Consensus 321 ~~ 322 (542)
..
T Consensus 261 ~~ 262 (277)
T cd06917 261 HS 262 (277)
T ss_pred cc
Confidence 33
No 215
>KOG0042|consensus
Probab=71.90 E-value=5.4 Score=43.94 Aligned_cols=63 Identities=21% Similarity=0.310 Sum_probs=52.6
Q ss_pred HHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHHHH
Q psy15785 433 VIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEM 512 (542)
Q Consensus 433 ~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~~l 512 (542)
..+.-|..+|.|+.|+++.+++.++|.+.+..++++. ..++
T Consensus 594 ~~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~d~~~---------------------------------------~~~~ 634 (680)
T KOG0042|consen 594 RRKTRFAFLDADKKAYQAIADVLKVLKSENVGWDEDR---------------------------------------LHEE 634 (680)
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHHhcCCCCHHH---------------------------------------HHHH
Confidence 4556799999999999999999999999987888887 7777
Q ss_pred HHhCCC-CCCceeHHHHHHHHhc
Q psy15785 513 YREAPI-KNGMFDYIEFTRILKH 534 (542)
Q Consensus 513 ~~~~D~-~dG~Is~~EF~~~l~~ 534 (542)
.+++|. .+|.+...||.+++..
T Consensus 635 l~ea~~~~~g~v~l~e~~q~~s~ 657 (680)
T KOG0042|consen 635 LQEADENLNGFVELREFLQLMSA 657 (680)
T ss_pred HHHHHHhhcceeeHHHHHHHHHH
Confidence 777777 7788888888777653
No 216
>PHA03207 serine/threonine kinase US3; Provisional
Probab=71.89 E-value=2.1 Score=45.31 Aligned_cols=32 Identities=3% Similarity=-0.102 Sum_probs=25.8
Q ss_pred cchhhhhhhhHhhhc----ccchhhhhhhhhhhhcc
Q psy15785 291 ISRRTKMISRIYICR----RVTTSASRDEQSVCYSI 322 (542)
Q Consensus 291 Is~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~~ 322 (542)
.+..+++++++|+.. |+|+.+++.|||+...+
T Consensus 347 ~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~ 382 (392)
T PHA03207 347 MHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEP 382 (392)
T ss_pred cchhHHHHHHHHhccChhhCCCHHHHhhCchhhccc
Confidence 355667788888876 99999999999997643
No 217
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=71.88 E-value=1.6 Score=45.49 Aligned_cols=30 Identities=3% Similarity=0.089 Sum_probs=25.3
Q ss_pred cchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 291 ISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 291 Is~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.++.+++|+++|+.. |+|+.+++.|||+..
T Consensus 287 ~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 287 KTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred cchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 356678898888876 999999999999864
No 218
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=71.85 E-value=2 Score=42.69 Aligned_cols=66 Identities=12% Similarity=0.074 Sum_probs=43.9
Q ss_pred hhHHHHHhhhhccccccCCCCCCccccccccccc------ccccccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDDLENLYL------QTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~le~ly~------~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
+.+..+ .+.++.++++.|||.-..+. +.+.. .......++....+|++.|+.. |+++.++++|||+
T Consensus 207 ~Dvwsl--G~~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 207 SDIWSL--GITAIEMAEGAPPLCDMHPM-RALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred cchhHH--HHHHHHHHhCCCCccccCHH-hhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 445554 67788888999998755432 11110 0011124567788888888866 9999999999996
No 219
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=71.84 E-value=2.5 Score=41.62 Aligned_cols=61 Identities=7% Similarity=-0.137 Sum_probs=41.8
Q ss_pred hhhccccccCCCCCCccccc---------ccccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD---------LENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~---------le~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.++++..+.|.+||...... .....+....+..++..++++++.++.. |+++.+++.|||+
T Consensus 199 G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 199 GCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred HHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 56677778899988644331 0111222223456788899998887766 9999999999995
No 220
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=71.75 E-value=26 Score=29.37 Aligned_cols=77 Identities=17% Similarity=0.261 Sum_probs=41.9
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHH
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVD 510 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~ 510 (542)
.++++.+|+.+ .|++|.++...|..+|..+ .++...+..... ... +..-++
T Consensus 2 ~dKyRylFsli-sd~~g~~~~~~l~~lL~d~-----------------lqip~~vgE~~a----Fg~-------~e~sv~ 52 (90)
T PF09069_consen 2 EDKYRYLFSLI-SDSNGCMDQRKLGLLLHDV-----------------LQIPRAVGEGPA----FGY-------IEPSVR 52 (90)
T ss_dssp HHHHHHHHHHH-S-TTS-B-HHHHHHHHHHH-----------------HHHHHHTT-GGG----GT---------HHHHH
T ss_pred hHHHHHHHHHH-cCCCCCCcHHHHHHHHHHH-----------------HHHHHHhCcccc----ccC-------cHHHHH
Confidence 46789999999 4889999999999888652 011111111000 000 111177
Q ss_pred HHHHhCCCCCCceeHHHHHHHHhcCCC
Q psy15785 511 EMYREAPIKNGMFDYIEFTRILKHGAK 537 (542)
Q Consensus 511 ~l~~~~D~~dG~Is~~EF~~~l~~~~~ 537 (542)
..|+... ....|+-++|+..|...|.
T Consensus 53 sCF~~~~-~~~~I~~~~Fl~wl~~ePq 78 (90)
T PF09069_consen 53 SCFQQVQ-LSPKITENQFLDWLMSEPQ 78 (90)
T ss_dssp HHHHHTT-T-S-B-HHHHHHHHHT--T
T ss_pred HHhcccC-CCCccCHHHHHHHHHhCCC
Confidence 7777652 3456999999999987753
No 221
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=71.20 E-value=3.3 Score=41.42 Aligned_cols=69 Identities=12% Similarity=-0.008 Sum_probs=44.9
Q ss_pred hhHHHHHhhhhccccccCCCCCCccccc--cccccc----ccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDD--LENLYL----QTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVC 319 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~--le~ly~----~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~ 319 (542)
+.++.+ .++++.++.|.|||.-.++. ...+.. ....-..++..+.+++++++.. |+++.++++|||+.
T Consensus 196 ~Dv~sl--G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~ 273 (292)
T cd06644 196 ADIWSL--GITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVS 273 (292)
T ss_pred hhhHhH--HHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 344444 56677788899998655432 111111 1111234667788898888875 99999999999986
Q ss_pred h
Q psy15785 320 Y 320 (542)
Q Consensus 320 ~ 320 (542)
.
T Consensus 274 ~ 274 (292)
T cd06644 274 S 274 (292)
T ss_pred c
Confidence 5
No 222
>KOG2243|consensus
Probab=71.08 E-value=5.8 Score=47.41 Aligned_cols=61 Identities=26% Similarity=0.518 Sum_probs=44.3
Q ss_pred HHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHHHHHHh
Q psy15785 436 NAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVDEMYRE 515 (542)
Q Consensus 436 ~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~~l~~~ 515 (542)
..|+-||+||.|.||..+|..++.... +.+..+ ++-++.-
T Consensus 4061 dtfkeydpdgkgiiskkdf~kame~~k-~ytqse---------------------------------------~dfllsc 4100 (5019)
T KOG2243|consen 4061 DTFKEYDPDGKGIISKKDFHKAMEGHK-HYTQSE---------------------------------------IDFLLSC 4100 (5019)
T ss_pred ccchhcCCCCCccccHHHHHHHHhccc-cchhHH---------------------------------------HHHHHHh
Confidence 368999999999999999999987532 456666 5555555
Q ss_pred CCC-CCCceeHHHHHHHHhcCC
Q psy15785 516 API-KNGMFDYIEFTRILKHGA 536 (542)
Q Consensus 516 ~D~-~dG~Is~~EF~~~l~~~~ 536 (542)
+.. .+..++|++|+.-+...+
T Consensus 4101 ae~dend~~~y~dfv~rfhepa 4122 (5019)
T KOG2243|consen 4101 AEADENDMFDYEDFVDRFHEPA 4122 (5019)
T ss_pred hccCccccccHHHHHHHhcCch
Confidence 555 666788888887665443
No 223
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=70.96 E-value=2 Score=43.99 Aligned_cols=30 Identities=10% Similarity=0.032 Sum_probs=25.3
Q ss_pred cchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 291 ISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 291 Is~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.++.+.+|++.|+.. |+|+.+++.|||+..
T Consensus 280 ~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~ 313 (328)
T cd08226 280 FSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQ 313 (328)
T ss_pred hhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHH
Confidence 456678888888876 999999999999865
No 224
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=70.94 E-value=1.8 Score=44.61 Aligned_cols=32 Identities=9% Similarity=-0.035 Sum_probs=27.7
Q ss_pred cccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 289 FSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 289 ~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
..+++.+.++++.++.. |+++.+++.|||+..
T Consensus 264 ~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~ 299 (334)
T cd07855 264 PKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQ 299 (334)
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhh
Confidence 34688889999888876 999999999999975
No 225
>PLN00181 protein SPA1-RELATED; Provisional
Probab=70.78 E-value=2 Score=50.23 Aligned_cols=64 Identities=6% Similarity=-0.090 Sum_probs=35.8
Q ss_pred hhhccccccCCCCCCccccccccccccc--ccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhhc
Q psy15785 258 SINLDSDLLDTPDFYWERDDLENLYLQT--CNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCYS 321 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~le~ly~~~--~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~ 321 (542)
.++|+.++++.||+.........+.... ..+..-..+...+...++.. |+++.+++.|||+...
T Consensus 202 GviL~ELl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 202 GVLLFELFCPVSSREEKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred HHHHHHHhhCCCchhhHHHHHHHHHHhhcChhhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence 4556667778888654333222221111 11111123344555555554 9999999999999763
No 226
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=70.78 E-value=3.7 Score=41.76 Aligned_cols=69 Identities=9% Similarity=-0.027 Sum_probs=45.1
Q ss_pred hhHHHHHhhhhccccccCCCCCCcccccc--cccc---cccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDDL--ENLY---LQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~l--e~ly---~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
+.++.+ .+.++..+.|.|||+..++.. .... ........++...++|+.+++.. |+++.+++.|||+..
T Consensus 201 sDv~sl--Gvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~ 278 (313)
T cd06633 201 VDVWSL--GITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRR 278 (313)
T ss_pred hhHHHH--HHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence 345544 566777788999988765421 1110 11111223556678888777765 999999999999976
No 227
>KOG1955|consensus
Probab=70.72 E-value=11 Score=40.90 Aligned_cols=37 Identities=14% Similarity=0.338 Sum_probs=33.1
Q ss_pred hCCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHc
Q psy15785 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASL 392 (542)
Q Consensus 356 ~ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~l 392 (542)
++++++.+.+-.-|+.+-.|.+|.|+-.--++++.+-
T Consensus 224 ~IT~EQReYYvnQFrtvQpDp~gfisGsaAknFFtKS 260 (737)
T KOG1955|consen 224 QITPEQREYYVNQFRTVQPDPHGFISGSAAKNFFTKS 260 (737)
T ss_pred ccCHHHHHHHHhhhhcccCCcccccccHHHHhhhhhc
Confidence 6999999999999999999999999988888877653
No 228
>KOG0580|consensus
Probab=70.66 E-value=1.8 Score=42.93 Aligned_cols=59 Identities=14% Similarity=0.142 Sum_probs=43.6
Q ss_pred hhhccccccCCCCCCccccc-----c--cccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD-----L--ENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~-----l--e~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.|..|-.|.|.|||--.+.. . -.+++. ..||..+++|+-.++.+ |++..++++|||+..
T Consensus 209 gvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p----~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 209 GVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP----STISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred HHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC----cccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 34456678999999887743 1 223333 67999999999666655 999999999999853
No 229
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=70.60 E-value=2.4 Score=42.86 Aligned_cols=70 Identities=14% Similarity=0.126 Sum_probs=47.8
Q ss_pred hhHHHHHhhhhccccccCCCCCCccccc--c----cccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDD--L----ENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVC 319 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~--l----e~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~ 319 (542)
+.++.+ .++++.++.|.|||+...+. + .........+..++..+..+++.++.. |+++.+++.|||+.
T Consensus 198 ~Dv~sl--G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~ 275 (297)
T cd06659 198 VDIWSL--GIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLL 275 (297)
T ss_pred hhHHHH--HHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhc
Confidence 344443 46677778899999876543 1 111112233445777888888888866 99999999999997
Q ss_pred hc
Q psy15785 320 YS 321 (542)
Q Consensus 320 ~~ 321 (542)
..
T Consensus 276 ~~ 277 (297)
T cd06659 276 QT 277 (297)
T ss_pred cC
Confidence 64
No 230
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=70.19 E-value=1.8 Score=42.36 Aligned_cols=63 Identities=8% Similarity=-0.007 Sum_probs=40.2
Q ss_pred hhhccccccCCCCCCccccccccccc-------c---cccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDLENLYL-------Q---TCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~le~ly~-------~---~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.++++..++|.+||.-.+...+.... . ......+++.++.+++.++.. |+|+.+++.|||++.
T Consensus 186 G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~ 262 (265)
T cd06605 186 GLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK 262 (265)
T ss_pred HHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence 56677778899888644311111000 0 001111677788888887765 999999999999853
No 231
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=70.09 E-value=2.5 Score=44.27 Aligned_cols=32 Identities=3% Similarity=-0.009 Sum_probs=27.1
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhhhhc
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSVCYS 321 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~ 321 (542)
..++.+.+|+++|+.. |+|+.+++.|||+...
T Consensus 259 ~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 259 QATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG 294 (372)
T ss_pred CCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence 4577888999888876 9999999999999763
No 232
>PRK00394 transcription factor; Reviewed
Probab=69.96 E-value=17 Score=34.59 Aligned_cols=70 Identities=17% Similarity=0.296 Sum_probs=45.4
Q ss_pred EEEEeccccChhhHHhhhh-cCCccceecccccccCCCCceEEEeeeccCCCCceEEEEcCCcEEEecCC-HHHHHHHHH
Q psy15785 5 VAFSTAQEYDIDNLKKGIV-GKDLYELIEFDDNMQNGENSIQVIAKYQVGKEPRFIYFFQEGSLVAWNVS-DLEIENLLE 82 (542)
Q Consensus 5 ~a~~~a~~~~l~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~F~~G~vV~w~~~-~~~~~~~l~ 82 (542)
..+++.-.+||+.|+..+. ..-.|+|-.|+-- + |...+..-.+-+|+.|.||+=|.. +++....++
T Consensus 99 as~~l~~~i~L~~la~~~~~~~~~YePe~fPgl----------v--yR~~~pk~~~lIF~SGKvvitGaks~~~~~~a~~ 166 (179)
T PRK00394 99 ASADLGVELNLNAIAIGLGLENIEYEPEQFPGL----------V--YRLDDPKVVVLLFGSGKLVITGAKSEEDAEKAVE 166 (179)
T ss_pred EEEEcCCeEcHHHHHHhcCcCCcEECcccCceE----------E--EEecCCcEEEEEEcCCEEEEEecCCHHHHHHHHH
Confidence 3456788999999998771 2244666555431 1 222233456889999999999985 555666666
Q ss_pred HHHH
Q psy15785 83 FLKQ 86 (542)
Q Consensus 83 ~l~~ 86 (542)
.+.+
T Consensus 167 ~i~~ 170 (179)
T PRK00394 167 KILE 170 (179)
T ss_pred HHHH
Confidence 5543
No 233
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=69.91 E-value=2.8 Score=42.96 Aligned_cols=63 Identities=11% Similarity=0.001 Sum_probs=43.1
Q ss_pred hhhccccccCCCCCCccccc--cccccc-----ccccccccchhhhhhhhHhhhc----cc-----chhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYL-----QTCNYFSISRRTKMISRIYICR----RV-----TTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~-----~~~~~~eIs~r~k~L~r~~l~~----r~-----ta~~~l~h~w~~~ 320 (542)
.++++.++.|.+||...... ...+.. .......+++.+++|+++++.. |+ +++++++|||++.
T Consensus 194 G~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 272 (332)
T cd05614 194 GILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKG 272 (332)
T ss_pred hhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 56788889999998654332 111111 1111235788889999888877 88 7889999999965
No 234
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=69.89 E-value=2.7 Score=43.11 Aligned_cols=63 Identities=10% Similarity=0.164 Sum_probs=43.9
Q ss_pred hhhccccccCCCCCCccccc--ccccccccccc-cccchhhhhhhhHhhhc----cc-----chhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQTCNY-FSISRRTKMISRIYICR----RV-----TTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~~~~~-~eIs~r~k~L~r~~l~~----r~-----ta~~~l~h~w~~~ 320 (542)
.++++.++.|.+||...+.. ...+......+ ..+++.+.+|++.|+.. |+ ++.+++.|||+..
T Consensus 183 G~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~ 257 (325)
T cd05594 183 GVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAG 257 (325)
T ss_pred cceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCC
Confidence 56788899999999876543 11111111111 24788889999888876 86 8999999999975
No 235
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=69.47 E-value=2.5 Score=41.84 Aligned_cols=30 Identities=10% Similarity=-0.007 Sum_probs=25.4
Q ss_pred cccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 289 FSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 289 ~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
..++....+|+++++.. |+++.+++.|||+
T Consensus 253 ~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 253 PNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred ccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 45677888898888765 9999999999996
No 236
>KOG0612|consensus
Probab=69.29 E-value=1.8 Score=51.18 Aligned_cols=75 Identities=19% Similarity=0.186 Sum_probs=57.9
Q ss_pred HHHHHHhhhHHHHH---------hhhhccccccCCCCCCccccc---------ccccccccccccccchhhhhhhhHhhh
Q psy15785 243 REVLQKTGQLFALR---------HSINLDSDLLDTPDFYWERDD---------LENLYLQTCNYFSISRRTKMISRIYIC 304 (542)
Q Consensus 243 ~~~~~~~G~l~~~r---------~~v~l~~~Lld~P~f~w~~~~---------le~ly~~~~~~~eIs~r~k~L~r~~l~ 304 (542)
.+|++-+|.= .-+ -.|.+|-+|.|+-|||.++-- -+.+.|. .-.+||+.+++|++..++
T Consensus 245 PEvLqs~~~~-~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP--~~~~VSeeakdLI~~ll~ 321 (1317)
T KOG0612|consen 245 PEVLQSQGDG-KGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFP--DETDVSEEAKDLIEALLC 321 (1317)
T ss_pred HHHHHhhcCC-ccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCC--cccccCHHHHHHHHHHhc
Confidence 5888877765 111 257889999999999998742 2455555 566799999999998888
Q ss_pred c---ccc---hhhhhhhhhhhh
Q psy15785 305 R---RVT---TSASRDEQSVCY 320 (542)
Q Consensus 305 ~---r~t---a~~~l~h~w~~~ 320 (542)
. |+. ..+..+||||..
T Consensus 322 ~~e~RLgrngiedik~HpFF~g 343 (1317)
T KOG0612|consen 322 DREVRLGRNGIEDIKNHPFFEG 343 (1317)
T ss_pred ChhhhcccccHHHHHhCccccC
Confidence 8 555 999999999875
No 237
>PLN00062 TATA-box-binding protein; Provisional
Probab=69.19 E-value=19 Score=34.25 Aligned_cols=72 Identities=18% Similarity=0.170 Sum_probs=46.7
Q ss_pred EEEEEeccccChhhHHhhhhcCCccceecccccccCCCCceEEEeeeccCCCCceEEEEcCCcEEEecCC-HHHHHHHHH
Q psy15785 4 VVAFSTAQEYDIDNLKKGIVGKDLYELIEFDDNMQNGENSIQVIAKYQVGKEPRFIYFFQEGSLVAWNVS-DLEIENLLE 82 (542)
Q Consensus 4 v~a~~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~F~~G~vV~w~~~-~~~~~~~l~ 82 (542)
|..+++.-.+||+.|+......-.|+|-.|+-- + |...+..-.+-+|..|.||+=|.. +++....++
T Consensus 98 vas~~l~~~i~L~~la~~~~~~~~YePE~fPgl----------i--yr~~~pk~~~liF~sGkvvitGaks~~~~~~ai~ 165 (179)
T PLN00062 98 VGSCDVKFPIRLEGLAYAHGAFSSYEPELFPGL----------I--YRMKQPKIVLLIFVSGKIVITGAKVREEIYTAFE 165 (179)
T ss_pred EEEEECCCcccHHHHHHhchhhcccCcccCceE----------E--EEeCCCcEEEEEeCCCEEEEEecCCHHHHHHHHH
Confidence 455678889999999974333344665444421 1 332333456789999999999987 555666666
Q ss_pred HHHHh
Q psy15785 83 FLKQF 87 (542)
Q Consensus 83 ~l~~~ 87 (542)
.+.+.
T Consensus 166 ~i~p~ 170 (179)
T PLN00062 166 NIYPV 170 (179)
T ss_pred HHHHH
Confidence 66543
No 238
>KOG0578|consensus
Probab=69.04 E-value=4 Score=44.82 Aligned_cols=62 Identities=13% Similarity=-0.055 Sum_probs=47.4
Q ss_pred hhccccccCCCCCCcccccc------cccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 259 INLDSDLLDTPDFYWERDDL------ENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 259 v~l~~~Lld~P~f~w~~~~l------e~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
|..--++-|.|||+-++|-. ..---.+.....+|+..++|..++|+. |.+|.++|.||+++.
T Consensus 457 IMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 457 IMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKM 528 (550)
T ss_pred hHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence 34445678999999877741 112224567788999999999888877 999999999999965
No 239
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=68.97 E-value=2.6 Score=43.25 Aligned_cols=63 Identities=14% Similarity=0.052 Sum_probs=42.8
Q ss_pred hhhccccccCCCCCCccccc--ccccc-cccccccccchhhhhhhhHhhhc----ccch----hhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLY-LQTCNYFSISRRTKMISRIYICR----RVTT----SASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly-~~~~~~~eIs~r~k~L~r~~l~~----r~ta----~~~l~h~w~~~ 320 (542)
.++++.++.|.|||...+.. +..+. .....-..++..+.+++++++.+ |+++ .+++.|||+..
T Consensus 183 G~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~ 256 (325)
T cd05604 183 GAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFES 256 (325)
T ss_pred cceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCC
Confidence 56788889999999876543 11111 11112235788888888888775 7776 48999999965
No 240
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=68.70 E-value=2.8 Score=41.78 Aligned_cols=63 Identities=13% Similarity=0.226 Sum_probs=42.9
Q ss_pred hhhccccccCCCCCCcccccc--ccccc-----c-cccccccchhhhhhhhHhhhc----ccch----hhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL--ENLYL-----Q-TCNYFSISRRTKMISRIYICR----RVTT----SASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l--e~ly~-----~-~~~~~eIs~r~k~L~r~~l~~----r~ta----~~~l~h~w~~~ 320 (542)
.+.++.+++|.|||....... +.+.. . ......+++.+++|+++++.. |+++ .+.+.|||++.
T Consensus 181 Gv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~ 259 (277)
T cd05607 181 GCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKT 259 (277)
T ss_pred HHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcC
Confidence 567888899999987644321 11100 0 112245788899999888877 9999 66789999965
No 241
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=68.55 E-value=2 Score=44.42 Aligned_cols=31 Identities=6% Similarity=0.007 Sum_probs=26.9
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.++..+.+|+++|+.. |+|+.+++.|||++.
T Consensus 271 ~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~ 305 (342)
T cd07854 271 GVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC 305 (342)
T ss_pred CCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence 4777888899888876 999999999999964
No 242
>KOG1707|consensus
Probab=68.50 E-value=7.8 Score=42.98 Aligned_cols=68 Identities=19% Similarity=0.398 Sum_probs=51.1
Q ss_pred hCCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCC-CH-HHHHHHHhcCCCCcchhhhHHHHhh
Q psy15785 356 MFDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNP-TD-DYLEGMMGEAPGPINFTMFLTLFGD 423 (542)
Q Consensus 356 ~ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~-s~-~ei~~l~~~~dG~Idf~EFl~~~~~ 423 (542)
.+++.-++-+..+|..+|.|+||.++..|+..+++..+..+ +. .+.........|.++|.-|++.+..
T Consensus 308 ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P~~pW~~~~~~~~t~~~~~G~ltl~g~l~~WsL 377 (625)
T KOG1707|consen 308 ELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTAPGSPWTSSPYKDSTVKNERGWLTLNGFLSQWSL 377 (625)
T ss_pred eccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhCCCCCCCCCcccccceecccceeehhhHHHHHHH
Confidence 58888999999999999999999999999999999875433 10 0111111125789999999987753
No 243
>KOG4578|consensus
Probab=68.40 E-value=3 Score=42.73 Aligned_cols=69 Identities=13% Similarity=0.246 Sum_probs=49.2
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHH
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVD 510 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~ 510 (542)
+..+...|..+|+|.++.|.+.|++-+=.-+-..-.... | ..
T Consensus 332 eRvv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~~rk--------C------------------------------~r 373 (421)
T KOG4578|consen 332 ERVVHWYFNQLDKNSNNDIERREWKPFKRVLLKKSKPRK--------C------------------------------SR 373 (421)
T ss_pred hheeeeeeeeecccccCccchhhcchHHHHHHhhccHHH--------H------------------------------hh
Confidence 345777899999999999999987653221111111111 1 77
Q ss_pred HHHHhCCC-CCCceeHHHHHHHHhcCCC
Q psy15785 511 EMYREAPI-KNGMFDYIEFTRILKHGAK 537 (542)
Q Consensus 511 ~l~~~~D~-~dG~Is~~EF~~~l~~~~~ 537 (542)
.+++..|. +|.+|+++||...|.....
T Consensus 374 k~~~yCDlNkDKkISl~Ew~~CL~~~~~ 401 (421)
T KOG4578|consen 374 KFFKYCDLNKDKKISLDEWRGCLGVEKE 401 (421)
T ss_pred hcchhcccCCCceecHHHHhhhhccccc
Confidence 89999999 9999999999998875443
No 244
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=68.37 E-value=2.7 Score=46.52 Aligned_cols=35 Identities=6% Similarity=-0.085 Sum_probs=29.8
Q ss_pred cccccccchhhhhhhhHhhhc-------ccchhhhhhhhhhh
Q psy15785 285 TCNYFSISRRTKMISRIYICR-------RVTTSASRDEQSVC 319 (542)
Q Consensus 285 ~~~~~eIs~r~k~L~r~~l~~-------r~ta~~~l~h~w~~ 319 (542)
...|..+++.+++|++++|.+ |+|+.++|+|||+.
T Consensus 463 ~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~ 504 (507)
T PLN03224 463 FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFL 504 (507)
T ss_pred cccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcC
Confidence 345778999999999877773 99999999999984
No 245
>cd04518 TBP_archaea archaeal TATA box binding protein (TBP): TBPs are transcription factors present in archaea and eukaryotes, that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=68.20 E-value=18 Score=34.22 Aligned_cols=68 Identities=15% Similarity=0.220 Sum_probs=45.3
Q ss_pred EEEEEeccccChhhHHhhhhcCCccceecccccccCCCCceEEEeeeccCCCCceEEEEcCCcEEEecC-CHHHHHHHHH
Q psy15785 4 VVAFSTAQEYDIDNLKKGIVGKDLYELIEFDDNMQNGENSIQVIAKYQVGKEPRFIYFFQEGSLVAWNV-SDLEIENLLE 82 (542)
Q Consensus 4 v~a~~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~F~~G~vV~w~~-~~~~~~~~l~ 82 (542)
|....+..++||..|...+.. --|+|.+|+-. .+ +. ......+-||+.|-+|+=|. +.++...-++
T Consensus 8 Vas~~l~~~ldL~~la~~~~n-~eY~P~~fpgl--------i~--Rl--~~Pk~t~lIF~SGKiv~tGaks~~~a~~a~~ 74 (174)
T cd04518 8 VASVDLGQELDLEKVAAELPN-AEYNPDQFPGL--------VY--RL--EDPKIAALIFRSGKMVCTGAKSVEDLHRAVK 74 (174)
T ss_pred EEEEEcCCeecHHHHHhhCCC-cEECCCcCcEE--------EE--Ec--cCCcEEEEEECCCeEEEEccCCHHHHHHHHH
Confidence 445667889999999988754 34666555431 11 12 23346789999999999998 5666555554
Q ss_pred HH
Q psy15785 83 FL 84 (542)
Q Consensus 83 ~l 84 (542)
.+
T Consensus 75 ~~ 76 (174)
T cd04518 75 EI 76 (174)
T ss_pred HH
Confidence 44
No 246
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=68.08 E-value=2.9 Score=42.30 Aligned_cols=65 Identities=8% Similarity=-0.077 Sum_probs=42.2
Q ss_pred hhhccccccCCCCCCccccccccccc--c-cc--cccccchhhhhhhhHhhhc----ccchhhhhhhhhhhhcc
Q psy15785 258 SINLDSDLLDTPDFYWERDDLENLYL--Q-TC--NYFSISRRTKMISRIYICR----RVTTSASRDEQSVCYSI 322 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~le~ly~--~-~~--~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~~ 322 (542)
.++++..+.|.|||...++.-..... . .. .-...++.++++++.++.. |+++.+++.|||+....
T Consensus 201 G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 201 GITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred HHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 56667788999998765542100000 0 00 0112466788888888875 99999999999997643
No 247
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=67.62 E-value=3.1 Score=42.84 Aligned_cols=33 Identities=6% Similarity=0.000 Sum_probs=28.8
Q ss_pred ccccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 288 YFSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 288 ~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
+..+++.+.+|+++++.. |+|+.+++.|||+..
T Consensus 260 ~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~ 296 (337)
T cd07858 260 FPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLAS 296 (337)
T ss_pred cccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhh
Confidence 346888899999988886 999999999999965
No 248
>KOG1029|consensus
Probab=67.52 E-value=7.7 Score=44.05 Aligned_cols=37 Identities=22% Similarity=0.515 Sum_probs=31.7
Q ss_pred CCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcC
Q psy15785 357 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLG 393 (542)
Q Consensus 357 ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg 393 (542)
++.....+++++|+.+|+..+|+++-..-+.+|-.-|
T Consensus 189 Vp~~~klKY~QlFNa~DktrsG~Lsg~qaR~aL~qS~ 225 (1118)
T KOG1029|consen 189 VPQHNKLKYRQLFNALDKTRSGYLSGQQARSALGQSG 225 (1118)
T ss_pred ccchhhhHHHHHhhhcccccccccccHHHHHHHHhcC
Confidence 5566777899999999999999999999999886544
No 249
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=67.48 E-value=3 Score=43.52 Aligned_cols=29 Identities=3% Similarity=0.110 Sum_probs=24.4
Q ss_pred chhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 292 SRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 292 s~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
+..+++|+++|+.. |+|+.+++.|||+..
T Consensus 291 ~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 291 ASQARDLLSKMLVIDASKRISVDEALQHPYINV 323 (364)
T ss_pred cHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 45678888877776 999999999999964
No 250
>PHA03209 serine/threonine kinase US3; Provisional
Probab=67.39 E-value=2.9 Score=43.67 Aligned_cols=32 Identities=3% Similarity=0.007 Sum_probs=26.7
Q ss_pred cccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 289 FSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 289 ~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
..++..+.+|+++|+.. |+|+.+++.|||++.
T Consensus 321 ~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 321 VNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred cCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 35667777888888877 999999999999864
No 251
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=67.22 E-value=2.3 Score=41.56 Aligned_cols=61 Identities=10% Similarity=-0.071 Sum_probs=40.4
Q ss_pred hhhccccccCCCCCCccccccccc-----ccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDLENL-----YLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~le~l-----y~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.++++..+.|.|||.-.++..... .....--..+++.+.++++.++.. |+|+.+++.|||+
T Consensus 194 G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 194 GCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred HHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 667777888999976543321000 000111135677888898887765 9999999999996
No 252
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=67.20 E-value=3.5 Score=40.93 Aligned_cols=69 Identities=16% Similarity=0.147 Sum_probs=45.7
Q ss_pred hhHHHHHhhhhccccccCCCCCCccccc--cccc-----ccccccccccchhhhhhhhHhhhc----cc-----chhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDD--LENL-----YLQTCNYFSISRRTKMISRIYICR----RV-----TTSASR 313 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~--le~l-----y~~~~~~~eIs~r~k~L~r~~l~~----r~-----ta~~~l 313 (542)
+.++.+ .++++.++.|.+||...... ...+ .........+++.+.+++++++.. |+ ++.+++
T Consensus 175 ~Di~sl--G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll 252 (277)
T cd05577 175 VDWFAL--GCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVR 252 (277)
T ss_pred hhhHHH--HHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHH
Confidence 344443 56778888999998765542 1111 111112234688899999888866 88 888899
Q ss_pred hhhhhhh
Q psy15785 314 DEQSVCY 320 (542)
Q Consensus 314 ~h~w~~~ 320 (542)
.|||+..
T Consensus 253 ~h~~~~~ 259 (277)
T cd05577 253 EHPLFKD 259 (277)
T ss_pred hChhhhc
Confidence 9999954
No 253
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=67.18 E-value=3.3 Score=40.39 Aligned_cols=61 Identities=10% Similarity=-0.079 Sum_probs=43.0
Q ss_pred hhhccccccCCCCCCcccccccc-------cccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDLEN-------LYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~le~-------ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.++++..+.|.+||....+.... .......+..+++.+.++++.++.. |+++.+++.|||+
T Consensus 193 G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 193 GCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred HHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 56777788899998654332111 1112334556788889999888865 9999999999996
No 254
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=67.03 E-value=3.1 Score=40.70 Aligned_cols=62 Identities=6% Similarity=-0.051 Sum_probs=40.6
Q ss_pred hhhccccccCCCCCCcccccc--cccc------cccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL--ENLY------LQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVC 319 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l--e~ly------~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~ 319 (542)
.+.++..+.|.|||.+..... .... .....-..+++.+.++.+.++.. |+++.++++|||++
T Consensus 195 G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 195 GCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred HHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 456677788999987655321 1110 01111124677888888777765 99999999999974
No 255
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=66.81 E-value=2.1 Score=42.35 Aligned_cols=29 Identities=10% Similarity=0.077 Sum_probs=25.2
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.++..+.+|+++|+.. |+++.+++.|||+
T Consensus 250 ~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 250 NASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred cccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 4577888898888887 9999999999996
No 256
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=66.26 E-value=2.4 Score=43.39 Aligned_cols=63 Identities=16% Similarity=0.178 Sum_probs=43.1
Q ss_pred hhhccccccCCCCCCccccc--ccccccccccc-cccchhhhhhhhHhhhc----ccchh-hhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQTCNY-FSISRRTKMISRIYICR----RVTTS-ASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~~~~~-~eIs~r~k~L~r~~l~~----r~ta~-~~l~h~w~~~ 320 (542)
.++++.+++|.+||...++. +..+......+ ..++..+++|+++++.. |+++. +++.|||+..
T Consensus 183 G~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~ 253 (316)
T cd05619 183 GVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFRE 253 (316)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCC
Confidence 66788889999999766543 11111111111 13678889999888866 99986 8899999865
No 257
>KOG0610|consensus
Probab=66.13 E-value=3.6 Score=43.73 Aligned_cols=61 Identities=16% Similarity=0.104 Sum_probs=49.6
Q ss_pred hhhccccccCCCCCCccccc-------ccccccccccccccchhhhhhhhHhhhc----ccc----hhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD-------LENLYLQTCNYFSISRRTKMISRIYICR----RVT----TSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~-------le~ly~~~~~~~eIs~r~k~L~r~~l~~----r~t----a~~~l~h~w~~~ 320 (542)
.|-+|-+|.|+-||=+.+.+ ...+-|.... .+|..+++|+|++|++ |+- |+++=.||++..
T Consensus 322 GIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~--~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~g 397 (459)
T KOG0610|consen 322 GIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEP--EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEG 397 (459)
T ss_pred HHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCC--cchhHHHHHHHHHhccChhhhhccccchHHhhcCccccC
Confidence 46788899999999998876 2555554443 8999999999999999 555 889899999875
No 258
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=66.10 E-value=3.8 Score=40.52 Aligned_cols=30 Identities=7% Similarity=0.036 Sum_probs=25.2
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhhh
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSVC 319 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~ 319 (542)
+++..+.+|+++|+.. |+|+.+++.|||+.
T Consensus 253 ~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 253 DASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred CccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 4567778888888876 99999999999973
No 259
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=65.89 E-value=3.3 Score=39.67 Aligned_cols=60 Identities=13% Similarity=-0.135 Sum_probs=39.2
Q ss_pred hhhccccccCCCCCCcccccc-----c-ccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL-----E-NLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQS 317 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l-----e-~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w 317 (542)
.++++..+.|.|||...++.. . ........-..++..+.++++.++.. |+|+.+++.|||
T Consensus 184 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 184 GITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 556777888999887654321 1 11111111122367788888887766 999999999999
No 260
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=65.84 E-value=2.9 Score=42.47 Aligned_cols=31 Identities=6% Similarity=-0.017 Sum_probs=25.5
Q ss_pred cchhhhhhhhHhhhc----ccchhhhhhhhhhhhc
Q psy15785 291 ISRRTKMISRIYICR----RVTTSASRDEQSVCYS 321 (542)
Q Consensus 291 Is~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~ 321 (542)
.+..+++|+.+|+.. |+|+.+++.|||+...
T Consensus 259 ~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 259 FSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 566678888777765 9999999999999763
No 261
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=64.89 E-value=2.4 Score=43.85 Aligned_cols=31 Identities=6% Similarity=0.011 Sum_probs=27.4
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.+++.+.+|++.|+.. |+|+.+++.|||+..
T Consensus 269 ~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~ 303 (343)
T cd07851 269 GANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAE 303 (343)
T ss_pred cCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccc
Confidence 4588889999888877 999999999999976
No 262
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=64.88 E-value=2.9 Score=42.86 Aligned_cols=63 Identities=17% Similarity=0.195 Sum_probs=43.7
Q ss_pred hhhccccccCCCCCCccccc--cccccccc-ccccccchhhhhhhhHhhhc----ccch-----hhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQT-CNYFSISRRTKMISRIYICR----RVTT-----SASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~~-~~~~eIs~r~k~L~r~~l~~----r~ta-----~~~l~h~w~~~ 320 (542)
.++++.++.|.|||...++. +..+.... .-...+++.+.+|+++++.. |++. .+++.|||+..
T Consensus 188 Gvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~ 262 (324)
T cd05587 188 GVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRR 262 (324)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 67788889999999766543 11111111 11235788899999888876 8765 78999999865
No 263
>PLN00062 TATA-box-binding protein; Provisional
Probab=64.69 E-value=23 Score=33.65 Aligned_cols=69 Identities=13% Similarity=0.156 Sum_probs=44.2
Q ss_pred EEEEE-EeccccChhhHHhhhhcCCccceecccccccCCCCceEEEeeeccCCCCceEEEEcCCcEEEecC-CHHHHHHH
Q psy15785 3 NVVAF-STAQEYDIDNLKKGIVGKDLYELIEFDDNMQNGENSIQVIAKYQVGKEPRFIYFFQEGSLVAWNV-SDLEIENL 80 (542)
Q Consensus 3 ~v~a~-~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~F~~G~vV~w~~-~~~~~~~~ 80 (542)
+|+|= .+...+||.+|+..+.. --|+|-+|+. +... . .+..-.+-||+.|-+|+=|. ++++....
T Consensus 6 NvVas~~l~~~idL~~la~~~~n-~eYePe~fpg--------li~R--l--~~Pk~t~lIF~SGKiviTGaks~e~a~~a 72 (179)
T PLN00062 6 NIVSTVNLDCKLDLKKIALQARN-AEYNPKRFAA--------VIMR--I--REPKTTALIFASGKMVCTGAKSEHDSKLA 72 (179)
T ss_pred EEEEEEEcCCcccHHHHHhhCCC-CEECCccCcE--------EEEE--e--CCCcEEEEEECCCeEEEEecCCHHHHHHH
Confidence 34444 47889999999987753 3466555442 1111 2 23335788999999999997 66666544
Q ss_pred HHHH
Q psy15785 81 LEFL 84 (542)
Q Consensus 81 l~~l 84 (542)
++.+
T Consensus 73 ~~~~ 76 (179)
T PLN00062 73 ARKY 76 (179)
T ss_pred HHHH
Confidence 4443
No 264
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=64.46 E-value=3.1 Score=42.66 Aligned_cols=30 Identities=13% Similarity=0.027 Sum_probs=24.9
Q ss_pred cchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 291 ISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 291 Is~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.++.+.+|++.++.. |+|+.++++|||++.
T Consensus 279 ~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~ 312 (327)
T cd08227 279 FSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 312 (327)
T ss_pred cCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence 456677888888865 999999999999965
No 265
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=64.25 E-value=5.2 Score=40.20 Aligned_cols=69 Identities=10% Similarity=-0.069 Sum_probs=45.9
Q ss_pred hhHHHHHhhhhccccccCCCCCCcccccc--cccc----cccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDDL--ENLY----LQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVC 319 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~l--e~ly----~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~ 319 (542)
+.++.+ .+.++..+.|.|||.-.++.- ..+. -.......++...+++++.++.. |+++.+++.|||++
T Consensus 196 ~Dv~sl--G~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~ 273 (293)
T cd06647 196 VDIWSL--GIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 273 (293)
T ss_pred hhHHHH--HHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHh
Confidence 344444 567777788999997655421 1110 01112335677788998888765 99999999999997
Q ss_pred h
Q psy15785 320 Y 320 (542)
Q Consensus 320 ~ 320 (542)
.
T Consensus 274 ~ 274 (293)
T cd06647 274 I 274 (293)
T ss_pred c
Confidence 6
No 266
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=64.18 E-value=3.2 Score=47.59 Aligned_cols=63 Identities=14% Similarity=0.106 Sum_probs=42.3
Q ss_pred hhhccccccCCCCCCccccc--ccccccccccc----cccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQTCNY----FSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~~~~~----~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.++++.++.|.|||.+..+. +..+......| ..++..+.++++.++.. |+++.+++.|||+..
T Consensus 567 G~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h~~~~~ 639 (669)
T cd05610 567 GVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHPLFHG 639 (669)
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhHCcCHHHHHhCHhhcC
Confidence 56778888999999887654 11111111112 24566677777776665 999999999999854
No 267
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=64.03 E-value=3.3 Score=41.87 Aligned_cols=30 Identities=13% Similarity=0.078 Sum_probs=24.1
Q ss_pred chhhhhhhhHhhhc----ccchhhhhhhhhhhhc
Q psy15785 292 SRRTKMISRIYICR----RVTTSASRDEQSVCYS 321 (542)
Q Consensus 292 s~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~ 321 (542)
+..+.+|++.++.. |+|+.++++|||++..
T Consensus 268 ~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~ 301 (314)
T cd08216 268 SEHFHQFVELCLQRDPESRPSASQLLNHSFFKQC 301 (314)
T ss_pred HHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhh
Confidence 35567788777765 9999999999999753
No 268
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=63.57 E-value=2.9 Score=40.96 Aligned_cols=66 Identities=8% Similarity=-0.013 Sum_probs=43.3
Q ss_pred hhHHHHHhhhhccccccCCCCCCccccccccccc-------ccccccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDDLENLYL-------QTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~le~ly~-------~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
+.++.+ .+.++..+.|.|||.-.+.. +..+. ....-..++..+.++++.++.. |+++.+++.|||+
T Consensus 189 ~Dv~sl--G~~~~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 189 SDIWSI--GCTVFEMATGKPPLASMDRL-AAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred hhHHHH--HHHHHHHHhCCCccccCChH-HHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 455544 56777788899998643322 11111 0111234677788899888865 9999999999996
No 269
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=63.31 E-value=3.3 Score=41.19 Aligned_cols=71 Identities=10% Similarity=0.011 Sum_probs=45.3
Q ss_pred hhHHHHHhhhhccccccCCCCCCccccccc-----ccc-------cccccccccchhhhhhhhHhhhc----ccchhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDDLE-----NLY-------LQTCNYFSISRRTKMISRIYICR----RVTTSASR 313 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~le-----~ly-------~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l 313 (542)
+.+..+ .+.++.+++|.+||.-..+..+ ... ........+++.+++++++++.. |+++.+++
T Consensus 174 ~Dvwsl--G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil 251 (279)
T cd06619 174 SDVWSL--GISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLM 251 (279)
T ss_pred chHHHH--HHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHh
Confidence 344444 5567777889999864332110 000 01112345677888999888766 99999999
Q ss_pred hhhhhhhcc
Q psy15785 314 DEQSVCYSI 322 (542)
Q Consensus 314 ~h~w~~~~~ 322 (542)
+|||+....
T Consensus 252 ~~~~~~~~~ 260 (279)
T cd06619 252 DHPFIVQYN 260 (279)
T ss_pred cCccccccc
Confidence 999997643
No 270
>cd04518 TBP_archaea archaeal TATA box binding protein (TBP): TBPs are transcription factors present in archaea and eukaryotes, that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=63.27 E-value=30 Score=32.70 Aligned_cols=68 Identities=18% Similarity=0.329 Sum_probs=44.6
Q ss_pred EEEEeccccChhhHHhhhhcCCccceecccccccCCCCceEEEeeeccCCCCceEEEEcCCcEEEecCCHH-HHHHHHHH
Q psy15785 5 VAFSTAQEYDIDNLKKGIVGKDLYELIEFDDNMQNGENSIQVIAKYQVGKEPRFIYFFQEGSLVAWNVSDL-EIENLLEF 83 (542)
Q Consensus 5 ~a~~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~F~~G~vV~w~~~~~-~~~~~l~~ 83 (542)
..+.+...+||+.|+..+. .--|+|-.|+-- + |......-.+-+|+.|-||+=|.... +....++.
T Consensus 100 as~~l~~~i~L~~la~~~~-~~~YePe~fpgl----------v--yR~~~pk~~~lIF~SGKvvitGaks~~~~~~a~~~ 166 (174)
T cd04518 100 ASADLGREVNLDAIAIGLP-NAEYEPEQFPGL----------V--YRLDEPKVVLLLFSSGKMVITGAKSEEDAKRAVEK 166 (174)
T ss_pred EEEEcCCccCHHHHHhhCC-CCccCcccCceE----------E--EEecCCcEEEEEeCCCEEEEEecCCHHHHHHHHHH
Confidence 4455788999999998775 345666655531 1 22223345678999999999996644 45555555
Q ss_pred HH
Q psy15785 84 LK 85 (542)
Q Consensus 84 l~ 85 (542)
+.
T Consensus 167 i~ 168 (174)
T cd04518 167 LL 168 (174)
T ss_pred HH
Confidence 43
No 271
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=63.04 E-value=4.3 Score=40.49 Aligned_cols=27 Identities=4% Similarity=0.075 Sum_probs=22.5
Q ss_pred chhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 292 SRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 292 s~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
+..+.+++++|+.. |+|+.+++.|||+
T Consensus 261 ~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 261 PPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred ChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 45667788777776 9999999999996
No 272
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=62.73 E-value=3.5 Score=40.03 Aligned_cols=58 Identities=9% Similarity=-0.090 Sum_probs=36.9
Q ss_pred hhhccccccCCCCCCcccccc--cccccccccccccchhhhhhhhHhhhc----ccch-----hhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL--ENLYLQTCNYFSISRRTKMISRIYICR----RVTT-----SASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l--e~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta-----~~~l~h~w~ 318 (542)
.++++..++|+|+|. ..+.. ........ ..+++.++.|+++|+.. |+++ .++++|||+
T Consensus 169 G~il~el~~g~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 169 GAILFELLTGKTLVE-CHPSGINTHTTLNIP--EWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred HHHHHHHHHCcchhh-cCchhcccccccCCc--ccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 456666777887653 22221 11111122 23678889999888866 8886 899999996
No 273
>KOG0169|consensus
Probab=62.72 E-value=11 Score=42.92 Aligned_cols=95 Identities=15% Similarity=0.189 Sum_probs=57.5
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHH---
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMI--- 507 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~--- 507 (542)
...+..+|+..|++++|.++..+...++..+...++...+.+ ++... .-..++.+...+|+..-...
T Consensus 135 ~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~--------~f~e~--~~~~~~k~~~~~~~~~~~~~~~r 204 (746)
T KOG0169|consen 135 EHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARR--------LFKES--DNSQTGKLEEEEFVKFRKELTKR 204 (746)
T ss_pred HHHHHHHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHH--------HHHHH--HhhccceehHHHHHHHHHhhccC
Confidence 556778899999999999999999999888877666655111 01110 11134445555555433333
Q ss_pred -HHHHHHHhCCCCCCceeHHHHHHHHhcC
Q psy15785 508 -EVDEMYREAPIKNGMFDYIEFTRILKHG 535 (542)
Q Consensus 508 -~i~~l~~~~D~~dG~Is~~EF~~~l~~~ 535 (542)
++..+|..+-.+.+.++-++..+++...
T Consensus 205 pev~~~f~~~s~~~~~ls~~~L~~Fl~~~ 233 (746)
T KOG0169|consen 205 PEVYFLFVQYSHGKEYLSTDDLLRFLEEE 233 (746)
T ss_pred chHHHHHHHHhCCCCccCHHHHHHHHHHh
Confidence 3555555544356667777766666543
No 274
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=62.57 E-value=2.8 Score=42.13 Aligned_cols=30 Identities=10% Similarity=0.025 Sum_probs=23.9
Q ss_pred cccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 289 FSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 289 ~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
..+++...++++.++.. |+|+.+++.|||+
T Consensus 278 ~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 278 GKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred ccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 34455667888888766 9999999999996
No 275
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=62.49 E-value=4 Score=40.41 Aligned_cols=31 Identities=10% Similarity=0.044 Sum_probs=25.9
Q ss_pred ccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 288 YFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 288 ~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
+..++..+.+|++.++.. |+++.+++.|||+
T Consensus 252 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 252 FPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred CCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 346678888998888765 9999999999996
No 276
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=62.46 E-value=4.3 Score=40.49 Aligned_cols=63 Identities=14% Similarity=-0.007 Sum_probs=42.9
Q ss_pred hhhccccccCCCCCCcccccc----ccccc--ccccccccchhhhhhhhHhhhc----cc-----chhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL----ENLYL--QTCNYFSISRRTKMISRIYICR----RV-----TTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l----e~ly~--~~~~~~eIs~r~k~L~r~~l~~----r~-----ta~~~l~h~w~~~ 320 (542)
.+.++..+.|.+||....... ..... ...-...++..++++++.|+.. |+ +++++++|||++.
T Consensus 183 G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~ 260 (279)
T cd05633 183 GCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKG 260 (279)
T ss_pred HHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccC
Confidence 567788889999986543321 11111 1111235788889999888777 88 6999999999976
No 277
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=62.41 E-value=4.7 Score=40.16 Aligned_cols=63 Identities=13% Similarity=-0.002 Sum_probs=43.0
Q ss_pred hhhccccccCCCCCCcccccc-ccc---cc--ccccccccchhhhhhhhHhhhc----cc-----chhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL-ENL---YL--QTCNYFSISRRTKMISRIYICR----RV-----TTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l-e~l---y~--~~~~~~eIs~r~k~L~r~~l~~----r~-----ta~~~l~h~w~~~ 320 (542)
.++++.++.|.+||....... ... .. ...-...++..+.+++++++.+ |+ ++.++++|||+..
T Consensus 183 G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~ 260 (278)
T cd05606 183 GCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRS 260 (278)
T ss_pred HHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccC
Confidence 567788889999987653221 111 00 1111234688899999888777 88 9999999999965
No 278
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=62.39 E-value=4.2 Score=42.21 Aligned_cols=64 Identities=14% Similarity=0.040 Sum_probs=43.1
Q ss_pred hhhccccccCCCCCCcccc-ccccc------ccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhhc
Q psy15785 258 SINLDSDLLDTPDFYWERD-DLENL------YLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCYS 321 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~-~le~l------y~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~ 321 (542)
.++++.+++|.+||.-... .+..+ -........++..+++|++.++.. |+++.+++.|||+...
T Consensus 260 Gvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~ 334 (353)
T PLN00034 260 GVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRA 334 (353)
T ss_pred HHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccC
Confidence 5677778889999862221 11111 111122345778889999888876 9999999999999764
No 279
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=62.35 E-value=5.3 Score=40.65 Aligned_cols=72 Identities=11% Similarity=-0.030 Sum_probs=46.8
Q ss_pred hHHHHHhhhhccccccCCCCCCcccccc--ccccc---ccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhhc
Q psy15785 251 QLFALRHSINLDSDLLDTPDFYWERDDL--ENLYL---QTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCYS 321 (542)
Q Consensus 251 ~l~~~r~~v~l~~~Lld~P~f~w~~~~l--e~ly~---~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~ 321 (542)
.++.+ .++++.++.|.|||+..+..- ..+.. .......+++.+++|+++|+.. |+++.+++.|+|+...
T Consensus 206 Dv~sl--Gvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 206 DVWSL--GITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred cHHHH--HHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 44444 667777889999998765421 11100 0111234667788888888766 9999999999998764
Q ss_pred ccc
Q psy15785 322 ILT 324 (542)
Q Consensus 322 ~~~ 324 (542)
...
T Consensus 284 ~~~ 286 (317)
T cd06635 284 RPE 286 (317)
T ss_pred Ccc
Confidence 433
No 280
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=62.30 E-value=4.1 Score=40.54 Aligned_cols=63 Identities=8% Similarity=-0.062 Sum_probs=42.4
Q ss_pred hhhccccccCCCCCCcccccccc---------cccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDLEN---------LYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~le~---------ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.++++..+.|.|||--.....+. .......+..++..+.+|++.++.. |+|+.+++.|||+..
T Consensus 197 G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 272 (288)
T cd06616 197 GITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD 272 (288)
T ss_pred HHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence 45666778899998543321111 1111122345788889999888876 999999999999965
No 281
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=62.29 E-value=5.2 Score=39.61 Aligned_cols=63 Identities=10% Similarity=-0.106 Sum_probs=39.2
Q ss_pred hhhccccccCCCCCCcccccccccccccccc----cccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDLENLYLQTCNY----FSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~le~ly~~~~~~----~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.++++..+.|.|||.-..+.-.......... ..++..+.+++++++.. |+++.+++.|||+..
T Consensus 188 G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06642 188 GITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR 258 (277)
T ss_pred HHHHHHHHhCCCCCcccchhhHHhhhhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHH
Confidence 5566677889988754332210000000001 13566678888877765 999999999999865
No 282
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=62.15 E-value=5 Score=39.79 Aligned_cols=70 Identities=10% Similarity=-0.055 Sum_probs=43.6
Q ss_pred hhHHHHHhhhhccccccCCCCCCcccccc--ccccccccc-c-cccchhhhhhhhHhhhc----ccchhhhhhhhhhhhc
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDDL--ENLYLQTCN-Y-FSISRRTKMISRIYICR----RVTTSASRDEQSVCYS 321 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~l--e~ly~~~~~-~-~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~ 321 (542)
+.++.+ .++++..++|.|||....+.. ..+...... . ..++..+.+++..++.. |+++.+++.|||+...
T Consensus 182 ~Dv~sl--G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 182 ADIWSL--GITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred hhHHHH--HHHHHHHHcCCCCCCccchHHHHHHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 344444 566777788999986544321 111111000 1 13566778888777654 9999999999999764
No 283
>KOG1955|consensus
Probab=62.12 E-value=15 Score=39.70 Aligned_cols=62 Identities=16% Similarity=0.397 Sum_probs=51.8
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHH
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVD 510 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~ 510 (542)
.+-...-|+..-.|-+|+|+..--+.++.. .+++-+| +.
T Consensus 230 ReYYvnQFrtvQpDp~gfisGsaAknFFtK--Sklpi~E---------------------------------------Ls 268 (737)
T KOG1955|consen 230 REYYVNQFRTVQPDPHGFISGSAAKNFFTK--SKLPIEE---------------------------------------LS 268 (737)
T ss_pred HHHHHhhhhcccCCcccccccHHHHhhhhh--ccCchHH---------------------------------------HH
Confidence 344556788888999999999988888875 4567777 88
Q ss_pred HHHHhCCC-CCCceeHHHHHHHHh
Q psy15785 511 EMYREAPI-KNGMFDYIEFTRILK 533 (542)
Q Consensus 511 ~l~~~~D~-~dG~Is~~EF~~~l~ 533 (542)
.|+...|. .||-++..||+..|.
T Consensus 269 hIWeLsD~d~DGALtL~EFcAAfH 292 (737)
T KOG1955|consen 269 HIWELSDVDRDGALTLSEFCAAFH 292 (737)
T ss_pred HHHhhcccCccccccHHHHHhhHh
Confidence 99999999 999999999998874
No 284
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=62.05 E-value=4 Score=40.00 Aligned_cols=66 Identities=11% Similarity=0.018 Sum_probs=41.9
Q ss_pred hhHHHHHhhhhccccccCCCCCCccccccccc-----cccccc---ccccchhhhhhhhHhhhc----ccchhhhhhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDDLENL-----YLQTCN---YFSISRRTKMISRIYICR----RVTTSASRDEQS 317 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~le~l-----y~~~~~---~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w 317 (542)
+.+.++ .++++.++.+.|||+-..+..... ...... -..++..+++++++++.. |+++.++++|||
T Consensus 190 ~DvwSl--G~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 190 CDIWAV--GITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred hhhHHH--HHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 344444 567777888899987554421100 000111 123566788888888865 999999999998
No 285
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=62.02 E-value=2.7 Score=41.53 Aligned_cols=29 Identities=7% Similarity=0.053 Sum_probs=24.2
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
++++.+.++++.++.. |+++.+++.|||+
T Consensus 255 ~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 255 EICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred hhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 4566777888888876 9999999999996
No 286
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=61.92 E-value=4.5 Score=41.93 Aligned_cols=30 Identities=3% Similarity=0.080 Sum_probs=24.6
Q ss_pred cchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 291 ISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 291 Is~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.++.+++|+++|+.. |+|+.+++.|||+..
T Consensus 283 ~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 283 KASQARDLLSKMLVIDPEKRISVDDALQHPYINV 316 (353)
T ss_pred chhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence 355577888888776 999999999999864
No 287
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=61.01 E-value=6 Score=39.27 Aligned_cols=63 Identities=8% Similarity=-0.090 Sum_probs=42.4
Q ss_pred hhhccccccCCCCCCcccccc--cc---ccc--ccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL--EN---LYL--QTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l--e~---ly~--~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.++++..+.|.+||....... .. +-. ...-...+++.+.+|++.++.. |++..+++.|||+..
T Consensus 194 G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~ 267 (286)
T cd06622 194 GLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVK 267 (286)
T ss_pred HHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhh
Confidence 566777888999986544321 11 100 0112234778888999888765 999999999999865
No 288
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=60.63 E-value=3.7 Score=42.11 Aligned_cols=63 Identities=10% Similarity=0.133 Sum_probs=44.0
Q ss_pred hhhccccccCCCCCCccccc--cccccccccc-ccccchhhhhhhhHhhhc----cc-----chhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQTCN-YFSISRRTKMISRIYICR----RV-----TTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~~~~-~~eIs~r~k~L~r~~l~~----r~-----ta~~~l~h~w~~~ 320 (542)
.++++.++.|.+||...+.. ...+...... -..+++.+++|++.++.. |+ ++.+++.|||+..
T Consensus 182 Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~ 256 (323)
T cd05595 182 GVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 256 (323)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCC
Confidence 66788888999998765543 1111111111 135788899999888877 87 8999999999965
No 289
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=60.61 E-value=3.7 Score=42.00 Aligned_cols=63 Identities=14% Similarity=0.206 Sum_probs=43.5
Q ss_pred hhhccccccCCCCCCccccc--ccccccccccc-cccchhhhhhhhHhhhc----cc-----chhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQTCNY-FSISRRTKMISRIYICR----RV-----TTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~~~~~-~eIs~r~k~L~r~~l~~----r~-----ta~~~l~h~w~~~ 320 (542)
.++++.++.|.|||...+.. +..+......+ ..+++.+.+|+++++.. |+ ++.+++.|||+..
T Consensus 188 G~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~ 262 (324)
T cd05589 188 GVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRD 262 (324)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCC
Confidence 56788889999998776543 11111111111 24788889999888877 87 6889999999865
No 290
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=60.25 E-value=3.5 Score=40.01 Aligned_cols=61 Identities=8% Similarity=-0.200 Sum_probs=39.0
Q ss_pred hhhccccccCCCCCCcccccc--cc-ccccc-ccccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL--EN-LYLQT-CNYFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l--e~-ly~~~-~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.++++..+.+.+||...+..- .. ..... .....++...++++++++.. |+|+.++++|||+
T Consensus 189 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 189 GCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 556666778888886544321 10 00000 01124566788888888765 9999999999996
No 291
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=60.12 E-value=4.8 Score=39.49 Aligned_cols=60 Identities=12% Similarity=-0.056 Sum_probs=40.6
Q ss_pred hhhccccccCCCCCCccccccc-----ccccccccc---cccchhhhhhhhHhhhc----ccchhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDLE-----NLYLQTCNY---FSISRRTKMISRIYICR----RVTTSASRDEQS 317 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~le-----~ly~~~~~~---~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w 317 (542)
.++++.++.+.|||+..++.-. .-.+....+ ..++..+.+|++.++.. |+++.++++|+|
T Consensus 196 G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 196 GITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred HHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 5677778889999877654311 111111111 24577888999888876 999999999987
No 292
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=59.52 E-value=3.9 Score=40.90 Aligned_cols=34 Identities=9% Similarity=0.008 Sum_probs=27.5
Q ss_pred cccchhhhhhhhHhhhc----ccchhhhhhhhhhhhcc
Q psy15785 289 FSISRRTKMISRIYICR----RVTTSASRDEQSVCYSI 322 (542)
Q Consensus 289 ~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~~ 322 (542)
..++..+.++++.|+.. |+|+.+++.|||+....
T Consensus 252 ~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~ 289 (298)
T cd07841 252 PAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDP 289 (298)
T ss_pred ccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCC
Confidence 34567778888888876 99999999999998743
No 293
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=59.45 E-value=5.3 Score=40.09 Aligned_cols=69 Identities=9% Similarity=0.019 Sum_probs=45.2
Q ss_pred hhHHHHHhhhhccccccCCCCCCccccc---ccccccc----cccccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDD---LENLYLQ----TCNYFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~---le~ly~~----~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
+.++++ .+.++.++.|++||...... +...... ......+++.+.+|+++++.. |++..+++.|||+
T Consensus 199 ~Di~sl--G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~ 276 (296)
T cd06618 199 ADVWSL--GISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFI 276 (296)
T ss_pred hhHHHH--HHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhh
Confidence 344444 56778888899998653322 1111111 111124677888998888876 9999999999998
Q ss_pred hh
Q psy15785 319 CY 320 (542)
Q Consensus 319 ~~ 320 (542)
..
T Consensus 277 ~~ 278 (296)
T cd06618 277 RR 278 (296)
T ss_pred hc
Confidence 65
No 294
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=59.36 E-value=6.9 Score=39.63 Aligned_cols=69 Identities=12% Similarity=0.017 Sum_probs=44.4
Q ss_pred hHHHHHhhhhccccccCCCCCCccccc--cccccccccc---ccccchhhhhhhhHhhhc----ccchhhhhhhhhhhhc
Q psy15785 251 QLFALRHSINLDSDLLDTPDFYWERDD--LENLYLQTCN---YFSISRRTKMISRIYICR----RVTTSASRDEQSVCYS 321 (542)
Q Consensus 251 ~l~~~r~~v~l~~~Lld~P~f~w~~~~--le~ly~~~~~---~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~ 321 (542)
.++.+ .++++..+.|.|||+..+.. ...+-..... -..++..++.|+++++.. |+++.+++.|||+...
T Consensus 196 Di~sl--G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 196 DVWSL--GITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred chHHH--HHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 44444 55667778899998765432 1101001111 124667788888888866 9999999999998663
No 295
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=59.25 E-value=5.2 Score=39.39 Aligned_cols=29 Identities=3% Similarity=0.014 Sum_probs=24.6
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.++..+.++++.++.. |+++.+++.|||+
T Consensus 250 ~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 250 RLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred cccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 4567788888888876 9999999999996
No 296
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=59.10 E-value=3.7 Score=42.26 Aligned_cols=31 Identities=6% Similarity=-0.002 Sum_probs=27.0
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.+++.+.+++++|+.. |+|+.+++.|||+..
T Consensus 263 ~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~ 297 (336)
T cd07849 263 NADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQ 297 (336)
T ss_pred ccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccc
Confidence 4678888999888876 999999999999975
No 297
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=59.02 E-value=4.4 Score=41.51 Aligned_cols=63 Identities=13% Similarity=0.114 Sum_probs=44.2
Q ss_pred hhhccccccCCCCCCccccc--cccccc-ccccccccchhhhhhhhHhhhc----ccchh----hhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYL-QTCNYFSISRRTKMISRIYICR----RVTTS----ASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~-~~~~~~eIs~r~k~L~r~~l~~----r~ta~----~~l~h~w~~~ 320 (542)
.++++.++.|.|||...+.. +..+.. .......+++.+++++++++.+ |+++. ++++|+|+..
T Consensus 183 G~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~ 256 (325)
T cd05602 183 GAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSP 256 (325)
T ss_pred cHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCC
Confidence 56778889999999866543 122211 1222346889999999888876 88876 7889999854
No 298
>PRK00394 transcription factor; Reviewed
Probab=58.77 E-value=37 Score=32.20 Aligned_cols=68 Identities=15% Similarity=0.240 Sum_probs=44.5
Q ss_pred EEEEEeccccChhhHHhhhhcCCccceecccccccCCCCceEEEeeeccCCCCceEEEEcCCcEEEec-CCHHHHHHHHH
Q psy15785 4 VVAFSTAQEYDIDNLKKGIVGKDLYELIEFDDNMQNGENSIQVIAKYQVGKEPRFIYFFQEGSLVAWN-VSDLEIENLLE 82 (542)
Q Consensus 4 v~a~~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~F~~G~vV~w~-~~~~~~~~~l~ 82 (542)
|....+...+||.+|+..+.. --|+|-+|+-- .+ +. ....-.+-||+.|-+|+=| -++++....++
T Consensus 7 Vas~~l~~~ldL~~la~~~~n-~eYePe~fpgl--------i~--Rl--~~Pk~t~lIf~sGKiv~tGa~S~~~a~~a~~ 73 (179)
T PRK00394 7 VASTDLGQELDLEKVAEDLPN-AEYNPEQFPGL--------VY--RL--EDPKIAALIFRSGKVVCTGAKSVEDLHEAVK 73 (179)
T ss_pred EEEEEcCCCcCHHHHHhhCCC-ceeCcccCceE--------EE--Ee--cCCceEEEEEcCCcEEEEccCCHHHHHHHHH
Confidence 445566789999999988754 34666555431 11 22 2334678999999999999 55555554444
Q ss_pred HH
Q psy15785 83 FL 84 (542)
Q Consensus 83 ~l 84 (542)
.+
T Consensus 74 ~~ 75 (179)
T PRK00394 74 II 75 (179)
T ss_pred HH
Confidence 43
No 299
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=58.45 E-value=4.8 Score=40.27 Aligned_cols=63 Identities=10% Similarity=0.073 Sum_probs=43.9
Q ss_pred hhhccccccCCCCCCcccccc--cccc----ccc-ccccccchhhhhhhhHhhhc----cc-----chhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL--ENLY----LQT-CNYFSISRRTKMISRIYICR----RV-----TTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l--e~ly----~~~-~~~~eIs~r~k~L~r~~l~~----r~-----ta~~~l~h~w~~~ 320 (542)
.+.++..+.|.+||...+... +.+. ... .....++..+.+|+++++.. |+ ++.+++.|||+..
T Consensus 188 G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~ 266 (285)
T cd05605 188 GCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRT 266 (285)
T ss_pred HHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence 567788889999998765431 1111 111 11234788889999888866 99 8999999999965
No 300
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=58.43 E-value=3.4 Score=40.13 Aligned_cols=61 Identities=11% Similarity=-0.015 Sum_probs=40.1
Q ss_pred hhhccccccCCCCCCcccc--c--------ccccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERD--D--------LENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~--~--------le~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.++++.++.+.+||.-.+. . ...+......+...++....+++.|+.. |+++.++++|||+
T Consensus 186 G~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 186 GIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred ccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 4466777888888775521 1 1122233333333447778888888766 9999999999996
No 301
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=58.37 E-value=3.9 Score=39.77 Aligned_cols=61 Identities=5% Similarity=-0.133 Sum_probs=40.3
Q ss_pred hhhccccccCCCCCCcccccc--cccccc-c-ccccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL--ENLYLQ-T-CNYFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l--e~ly~~-~-~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.++++..+.+.+||...+... ..+... . ..-..+++.+.++++.++.. |+++.+++.|||+
T Consensus 189 G~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 189 GCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 566777788888886544321 111000 0 11134778889999888866 9999999999996
No 302
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=58.03 E-value=5.4 Score=39.51 Aligned_cols=29 Identities=3% Similarity=0.120 Sum_probs=25.8
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.+++.+++|+++|+.. |+|+.+++.|||+
T Consensus 252 ~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 252 KLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred cCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 4678889999988887 9999999999996
No 303
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=57.86 E-value=6 Score=40.55 Aligned_cols=32 Identities=6% Similarity=0.012 Sum_probs=26.5
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhhhhc
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSVCYS 321 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~ 321 (542)
..+..+.++++.|+.. |+++.+++.|||++..
T Consensus 284 ~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~ 319 (335)
T PTZ00024 284 NASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSD 319 (335)
T ss_pred CCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCC
Confidence 3467778888888876 9999999999999763
No 304
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=57.78 E-value=4.6 Score=38.82 Aligned_cols=61 Identities=15% Similarity=0.061 Sum_probs=39.9
Q ss_pred hhhccccccCCCCCCccccccccccccc--cc----ccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDLENLYLQT--CN----YFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~le~ly~~~--~~----~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.++++..++|.+||.........++... .. -..++...+.+++.++.. |+++.+++.|||+
T Consensus 190 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 190 GCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred HHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 5667778889999877653211111110 01 123467788888777765 9999999999996
No 305
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=57.42 E-value=5.1 Score=39.22 Aligned_cols=60 Identities=10% Similarity=-0.151 Sum_probs=40.7
Q ss_pred hhhccccccCCCCCCccccccccc-----ccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDLENL-----YLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~le~l-----y~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.++++..+.|.+||...+.. ..+ ......-..++..+..++++++.. |+++.+++.|||+
T Consensus 199 G~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 199 GCLVVEMLTGKHPFPDCTQL-QAIFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred HHHHHHHhhCCCCCCCccHH-HHHHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 56777788899998654322 111 111112235678888898888776 9999999999996
No 306
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=57.34 E-value=6 Score=39.93 Aligned_cols=63 Identities=8% Similarity=0.099 Sum_probs=42.2
Q ss_pred hhhccccccCCCCCCccccc--ccccccccccc----cccchhhhhhhhHhhhc----ccc---hhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQTCNY----FSISRRTKMISRIYICR----RVT---TSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~~~~~----~eIs~r~k~L~r~~l~~----r~t---a~~~l~h~w~~~ 320 (542)
.+.++-.++|.+||....+. +.........+ ..++..++.++++|+.. |++ +.++++|||+..
T Consensus 203 G~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~ 278 (305)
T cd05609 203 GIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLG 278 (305)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccC
Confidence 56677788899999876543 11111111111 14677889999888877 887 688899999865
No 307
>PHA03211 serine/threonine kinase US3; Provisional
Probab=57.30 E-value=5.1 Score=43.79 Aligned_cols=32 Identities=3% Similarity=-0.067 Sum_probs=26.9
Q ss_pred cccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 289 FSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 289 ~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
..++..+++|+++||.. |+|+.++|+|||++.
T Consensus 425 ~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 425 YKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred ccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 35677888899888876 999999999999953
No 308
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=56.88 E-value=5.9 Score=40.37 Aligned_cols=63 Identities=10% Similarity=0.048 Sum_probs=42.6
Q ss_pred hhhccccccCCCCCCccccc--ccccccccccc-cccchhhhhhhhHhhhc----ccc-----hhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQTCNY-FSISRRTKMISRIYICR----RVT-----TSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~~~~~-~eIs~r~k~L~r~~l~~----r~t-----a~~~l~h~w~~~ 320 (542)
.++++.++.|.+||...++. +..+....... ..+++.+++|++.++.. |++ ..+++.|||+..
T Consensus 185 G~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~ 259 (318)
T cd05582 185 GVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFST 259 (318)
T ss_pred ceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCC
Confidence 45778889999998765543 12121111111 24788889999888877 888 556999999865
No 309
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=56.38 E-value=5.2 Score=39.55 Aligned_cols=65 Identities=8% Similarity=0.026 Sum_probs=41.5
Q ss_pred hhhccccccCCCCCC-cccc--ccccccccccc---ccccchhhhhhhhHhhhc----ccchhhhhhhhhhhhcc
Q psy15785 258 SINLDSDLLDTPDFY-WERD--DLENLYLQTCN---YFSISRRTKMISRIYICR----RVTTSASRDEQSVCYSI 322 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~-w~~~--~le~ly~~~~~---~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~~ 322 (542)
.++++.++.|.+||. |..+ .+......... -..+++...++++.++.. |++..+++.|||+....
T Consensus 194 G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 194 GITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred HHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 566777888998874 2221 11111111101 123677888888888766 99999999999997644
No 310
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=56.01 E-value=5.1 Score=38.62 Aligned_cols=61 Identities=15% Similarity=0.119 Sum_probs=40.3
Q ss_pred hhhccccccCCCCCCccccc--cccccc-ccccccccchhhhhhhhHhhhc----ccch---hhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYL-QTCNYFSISRRTKMISRIYICR----RVTT---SASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~-~~~~~~eIs~r~k~L~r~~l~~----r~ta---~~~l~h~w~ 318 (542)
.+.++..+.|.+||...+.. ...+.. ...--..++....+++++++.. |+++ .++++|||+
T Consensus 180 G~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 180 GVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 45667777899998766532 112111 1122223477788888888876 9999 899999996
No 311
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=55.95 E-value=6.6 Score=40.55 Aligned_cols=31 Identities=10% Similarity=0.007 Sum_probs=26.4
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.+++.+.+|++.|+.. |+++.+++.|||+..
T Consensus 268 ~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~ 302 (342)
T cd07879 268 KASPQAVDLLEKMLELDVDKRLTATEALEHPYFDS 302 (342)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhh
Confidence 4667788898888876 999999999999966
No 312
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=55.72 E-value=5.1 Score=40.86 Aligned_cols=31 Identities=10% Similarity=0.046 Sum_probs=26.6
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.++..+.+|++.++.. |+|+.+++.|||+..
T Consensus 260 ~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~ 294 (330)
T cd07834 260 GASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQ 294 (330)
T ss_pred cCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHh
Confidence 3677788899888876 999999999999976
No 313
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=55.70 E-value=38 Score=28.40 Aligned_cols=60 Identities=17% Similarity=0.321 Sum_probs=36.5
Q ss_pred HHHHHHhccccCCCCcceeHHHHHHHHHHc-------C----CCCCHHHHHHHHhc--CCCCcchhhhHHHHhh
Q psy15785 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLASL-------G----KNPTDDYLEGMMGE--APGPINFTMFLTLFGD 423 (542)
Q Consensus 363 ~~l~~~F~~~D~d~dG~Is~~EL~~~L~~l-------g----~~~s~~ei~~l~~~--~dG~Idf~EFl~~~~~ 423 (542)
++++-+|+.+ .|++|.++...|...|+.+ | +...+.-+...+.. .+..|+-++|+..+..
T Consensus 3 dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~~~~~~I~~~~Fl~wl~~ 75 (90)
T PF09069_consen 3 DKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQVQLSPKITENQFLDWLMS 75 (90)
T ss_dssp HHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHTTT-S-B-HHHHHHHHHT
T ss_pred HHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhcccCCCCccCHHHHHHHHHh
Confidence 5788899988 6889999999998888653 2 11245555555555 3566777777777664
No 314
>cd04516 TBP_eukaryotes eukaryotic TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=55.69 E-value=42 Score=31.73 Aligned_cols=69 Identities=14% Similarity=0.160 Sum_probs=43.1
Q ss_pred EEEE-EEeccccChhhHHhhhhcCCccceecccccccCCCCceEEEeeeccCCCCceEEEEcCCcEEEec-CCHHHHHHH
Q psy15785 3 NVVA-FSTAQEYDIDNLKKGIVGKDLYELIEFDDNMQNGENSIQVIAKYQVGKEPRFIYFFQEGSLVAWN-VSDLEIENL 80 (542)
Q Consensus 3 ~v~a-~~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~F~~G~vV~w~-~~~~~~~~~ 80 (542)
+|+| ..+...+||.+|+..+.. --|+|-+|+. +... . .+..-.+-+|+.|-+|+=| -++++....
T Consensus 6 NvVas~~l~~~idL~~la~~~~n-~eYePe~fpg--------li~R--l--~~Pk~t~lIF~SGKiviTGaks~e~a~~a 72 (174)
T cd04516 6 NIVATVNLGCKLDLKKIALRARN-AEYNPKRFAA--------VIMR--I--REPKTTALIFSSGKMVCTGAKSEDDSKLA 72 (174)
T ss_pred EEEEEEEcCCeecHHHHHhhCCC-CEECCccCcE--------EEEE--e--CCCcEEEEEECCCeEEEEecCCHHHHHHH
Confidence 3444 447889999999987754 3356554442 1221 1 2334568899999999998 455555544
Q ss_pred HHHH
Q psy15785 81 LEFL 84 (542)
Q Consensus 81 l~~l 84 (542)
++.+
T Consensus 73 ~~~i 76 (174)
T cd04516 73 ARKY 76 (174)
T ss_pred HHHH
Confidence 4443
No 315
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=55.48 E-value=6.6 Score=38.93 Aligned_cols=61 Identities=11% Similarity=-0.140 Sum_probs=38.9
Q ss_pred hhhccccccCCCCCCcccccc--ccccccc-ccc---cccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL--ENLYLQT-CNY---FSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l--e~ly~~~-~~~---~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.++++.++.+.|||...++.. ..+.... ... ...+..++.|+++|+.. |+|+.++++|+|+
T Consensus 216 Gvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 216 GITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred HHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 556677788999987765431 1111000 000 11355678888877765 9999999999996
No 316
>PTZ00284 protein kinase; Provisional
Probab=55.09 E-value=5.5 Score=43.31 Aligned_cols=28 Identities=7% Similarity=-0.134 Sum_probs=23.5
Q ss_pred hhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 293 RRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 293 ~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
+.+.+|++.||.. |+|+.++|+|||+..
T Consensus 412 ~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~ 443 (467)
T PTZ00284 412 DLLCDLIYGLLHYDRQKRLNARQMTTHPYVLK 443 (467)
T ss_pred HHHHHHHHHhCCcChhhCCCHHHHhcCccccc
Confidence 3456788888877 999999999999976
No 317
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=54.66 E-value=7.8 Score=37.84 Aligned_cols=63 Identities=16% Similarity=0.158 Sum_probs=40.9
Q ss_pred hhhccccccCCCCCCcccccc----cccc--cccccc-cccchhhhhhhhHhhhc----ccc-----hhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL----ENLY--LQTCNY-FSISRRTKMISRIYICR----RVT-----TSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l----e~ly--~~~~~~-~eIs~r~k~L~r~~l~~----r~t-----a~~~l~h~w~~~ 320 (542)
.++++..+.|.|||....+.. .... .....+ ..+++.+..++++++.+ |++ +.++++|||++.
T Consensus 179 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 257 (262)
T cd05572 179 GILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNG 257 (262)
T ss_pred HHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhC
Confidence 566777788999998766221 1111 000111 12367778888888866 998 899999999864
No 318
>KOG3555|consensus
Probab=54.65 E-value=13 Score=38.45 Aligned_cols=94 Identities=15% Similarity=0.156 Sum_probs=65.0
Q ss_pred HHHHHhccccCCCCcceeHHHHHHHHHHcC---CCCCHHHHHHHHhc----CCCCcchhhhHHHHhhhcCCCCcHHHHHH
Q psy15785 364 NFKEAFNMIDQNRDGFIDKEDLHDMLASLG---KNPTDDYLEGMMGE----APGPINFTMFLTLFGDRLQGTDPEDVIKN 436 (542)
Q Consensus 364 ~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg---~~~s~~ei~~l~~~----~dG~Idf~EFl~~~~~~~~~~~~~~~l~~ 436 (542)
+|+.+|..+-.+.++......+..+-..+. .++-..++.-||.. .||.++-.|..++.... .+.-++.
T Consensus 212 RL~dWF~~lhe~s~~~~~~ss~~~~~~~~d~s~~p~CKds~gWMFnklD~N~Dl~Ld~sEl~~I~ldk-----nE~Cikp 286 (434)
T KOG3555|consen 212 RLRDWFKALHEDSSQNDKTSSLHSAASGFDTSILPICKDSLGWMFNKLDTNYDLLLDQSELRAIELDK-----NEACIKP 286 (434)
T ss_pred HHHHHHHHHHhhhhccCcchhhcccccccccccCcchhhhhhhhhhccccccccccCHHHhhhhhccC-----chhHHHH
Confidence 568888887777777666666555433322 23445667777765 57888888877776653 2667888
Q ss_pred HHhhhCCCCCCcccHHHHHHHHHHcC
Q psy15785 437 AFGCFDEDNSGIINEERLRELLTSMG 462 (542)
Q Consensus 437 aF~~~D~d~~G~Is~eEL~~~L~~~g 462 (542)
.|...|...+|.||..|.-..+..-+
T Consensus 287 FfnsCD~~kDg~iS~~EWC~CF~k~~ 312 (434)
T KOG3555|consen 287 FFNSCDTYKDGSISTNEWCYCFQKSD 312 (434)
T ss_pred HHhhhcccccCccccchhhhhhccCC
Confidence 88888988899999888877765543
No 319
>KOG0608|consensus
Probab=54.37 E-value=7.9 Score=43.50 Aligned_cols=64 Identities=11% Similarity=0.075 Sum_probs=47.3
Q ss_pred hhhhccccccCCCCCCccccc---c----cccccccccccccchhhhhhhhHhhhc------ccchhhhhhhhhhhh
Q psy15785 257 HSINLDSDLLDTPDFYWERDD---L----ENLYLQTCNYFSISRRTKMISRIYICR------RVTTSASRDEQSVCY 320 (542)
Q Consensus 257 ~~v~l~~~Lld~P~f~w~~~~---l----e~ly~~~~~~~eIs~r~k~L~r~~l~~------r~ta~~~l~h~w~~~ 320 (542)
-.|+|+-+|.|.|||..+.|- + =+-++....--.+|+.+.+|++++.|. +--+.++-.||||+.
T Consensus 857 ~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~sad~RLGkng~d~vKaHpfFkg 933 (1034)
T KOG0608|consen 857 VGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCCSADSRLGKNGADQVKAHPFFKG 933 (1034)
T ss_pred hhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhcChhhhhcccchhhhhcCccccc
Confidence 368999999999999999985 1 112233344457899999999887776 445667888999964
No 320
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=54.34 E-value=3.7 Score=39.92 Aligned_cols=66 Identities=11% Similarity=-0.028 Sum_probs=43.4
Q ss_pred hhHHHHHhhhhccccccCCCCCCccccccccccc--------ccccccccchhhhhhhhHhhhc----ccchhhhhhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDDLENLYL--------QTCNYFSISRRTKMISRIYICR----RVTTSASRDEQS 317 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~le~ly~--------~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w 317 (542)
+.++.+ .+.++.++.|.|||...++....... ....-..++...+.++++++.. |+|+.+++.|||
T Consensus 185 ~Di~sl--G~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 185 CDIWAL--GITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred hhhHHH--HHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 445544 67778888999999765543111100 1112233456678888888776 999999999998
No 321
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=54.17 E-value=6.6 Score=39.05 Aligned_cols=63 Identities=11% Similarity=-0.112 Sum_probs=42.7
Q ss_pred hhhccccccCCCCCCcccccc------cccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL------ENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l------e~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.++++..+.|.+||...++.. ..-.........++..++.+++.++.. |+++.+++.|||+..
T Consensus 203 Gvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 275 (286)
T cd06614 203 GIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275 (286)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhc
Confidence 556677788999886554421 111112222233677888888887776 999999999999977
No 322
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=52.62 E-value=5.6 Score=40.60 Aligned_cols=63 Identities=17% Similarity=0.149 Sum_probs=41.7
Q ss_pred hhhccccccCCCCCCccccc--ccccccccccc-cccchhhhhhhhHhhhc----ccch-hhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQTCNY-FSISRRTKMISRIYICR----RVTT-SASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~~~~~-~eIs~r~k~L~r~~l~~----r~ta-~~~l~h~w~~~ 320 (542)
.++++.+++|.+||...++. +..+......+ ..++..+.+|++.++.. |++. .++++|||+..
T Consensus 183 G~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~ 253 (316)
T cd05592 183 GVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRG 253 (316)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCC
Confidence 56778888999999876653 11111111111 23677888898888777 8876 47889999865
No 323
>KOG4347|consensus
Probab=52.41 E-value=17 Score=40.74 Aligned_cols=51 Identities=20% Similarity=0.336 Sum_probs=36.2
Q ss_pred cchhhhHHHHhhhcCCCCcHHHHHHHHhhhCCCCCCcccHHHHHHHHHHcC
Q psy15785 412 INFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMG 462 (542)
Q Consensus 412 Idf~EFl~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g 462 (542)
|+|..|...+.....-..+..-+.+.|+.+|.+++|.|+..+|...|..+.
T Consensus 535 i~~~~f~~~f~~l~pw~~s~~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~ 585 (671)
T KOG4347|consen 535 IDYAQFLEVFRELLPWAVSLIFLERLFRLLDDSMTGLLTFKDLVSGLSILK 585 (671)
T ss_pred HHHhhHHHHhhccCchhHHHHHHHHHHHhcccCCcceeEHHHHHHHHHHHH
Confidence 556666665554333233355678899999999999999999988886653
No 324
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=52.19 E-value=6.7 Score=38.50 Aligned_cols=61 Identities=8% Similarity=-0.018 Sum_probs=37.3
Q ss_pred hhhccccccCCCCCCccccccccccccc-----cc-ccccchhhhhhhhHhhhc---ccchhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDLENLYLQT-----CN-YFSISRRTKMISRIYICR---RVTTSASRDEQSVC 319 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~le~ly~~~-----~~-~~eIs~r~k~L~r~~l~~---r~ta~~~l~h~w~~ 319 (542)
.++++..+.|.|||.-..+. +.+.... .. -..+++.++.+++.+... |+++.+++.|||++
T Consensus 196 G~i~~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 196 GCTVVEMLTEKPPWAEYEAM-AAIFKIATQPTNPQLPSHISEHARDFLGCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred HHHHHHHHHCCCCccccchH-HHHHHHhcCCCCCCCchhcCHHHHHHHHHhcCChhhCcCHHHHhcCcccc
Confidence 56677788899998643322 1111110 11 123566777777543323 99999999999985
No 325
>PHA03212 serine/threonine kinase US3; Provisional
Probab=52.12 E-value=6.9 Score=41.62 Aligned_cols=31 Identities=10% Similarity=-0.031 Sum_probs=26.0
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.++..+.+|+++||.. |+|+.++++|||++.
T Consensus 347 ~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~ 381 (391)
T PHA03212 347 ELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQD 381 (391)
T ss_pred hhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhcc
Confidence 3556678888888876 999999999999976
No 326
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=51.74 E-value=7.6 Score=37.57 Aligned_cols=65 Identities=12% Similarity=0.119 Sum_probs=42.8
Q ss_pred hhHHHHHhhhhccccccCCCCCCccccc--c----cccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDD--L----ENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~--l----e~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
+.++.+ .++++..+.|.+||.-.++. . ....-... ..++..+.+++++++.. |+++.+++.|||+
T Consensus 182 ~Di~sl--G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 182 SDVWAL--GVVLYECCTGKHPFDANNQGALILKIIRGVFPPVS--QMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred cchHHH--HHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc--cccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 344444 56777788899998655532 1 11111111 14667788888888765 9999999999995
No 327
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=51.69 E-value=6.3 Score=40.27 Aligned_cols=63 Identities=17% Similarity=0.261 Sum_probs=43.3
Q ss_pred hhhccccccCCCCCCccccc--ccccccccccc-cccchhhhhhhhHhhhc----ccch-----hhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQTCNY-FSISRRTKMISRIYICR----RVTT-----SASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~~~~~-~eIs~r~k~L~r~~l~~----r~ta-----~~~l~h~w~~~ 320 (542)
.++++.++.|.|||...++. +..+......+ ..+++.+.+|+++++.. |++. .+++.|||+..
T Consensus 188 Gvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~ 262 (323)
T cd05616 188 GVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 262 (323)
T ss_pred hHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCC
Confidence 56788889999999876654 11111111111 35889999999888776 7764 78899999865
No 328
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=51.60 E-value=9.9 Score=39.06 Aligned_cols=63 Identities=8% Similarity=0.021 Sum_probs=40.5
Q ss_pred hhhccccccCCCCCCccccc------c-----ccccc-ccccccccchhhhhhhhHhhhc----ccch------hhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD------L-----ENLYL-QTCNYFSISRRTKMISRIYICR----RVTT------SASRDE 315 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~------l-----e~ly~-~~~~~~eIs~r~k~L~r~~l~~----r~ta------~~~l~h 315 (542)
.++++.++.|.|||...... . ..+.. ...-...++..+++|+++++.. |+++ .++++|
T Consensus 183 G~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 183 GVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred cHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 45778888999998642211 0 00000 1111235678888999888876 8885 689999
Q ss_pred hhhhh
Q psy15785 316 QSVCY 320 (542)
Q Consensus 316 ~w~~~ 320 (542)
||+..
T Consensus 263 p~f~~ 267 (329)
T cd05618 263 PFFRN 267 (329)
T ss_pred CCCCC
Confidence 99965
No 329
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=51.53 E-value=5.3 Score=39.81 Aligned_cols=26 Identities=4% Similarity=0.135 Sum_probs=21.9
Q ss_pred hhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 293 RRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 293 ~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
..+.+++++|+.. |+|+.+++.|||+
T Consensus 262 ~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 262 PHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred hhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 5666788888776 9999999999996
No 330
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=51.28 E-value=5.5 Score=39.84 Aligned_cols=31 Identities=10% Similarity=0.045 Sum_probs=26.1
Q ss_pred ccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 288 YFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 288 ~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
+..++..+.++++.|+.. |+++.+++.|||+
T Consensus 268 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 268 FSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred cCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 335788889999888776 9999999999996
No 331
>KOG0663|consensus
Probab=51.00 E-value=8.1 Score=40.23 Aligned_cols=41 Identities=15% Similarity=0.083 Sum_probs=30.3
Q ss_pred cchhhhhhhhHhhhc----ccchhhhhhhhhhhhcccccchhHHHH
Q psy15785 291 ISRRTKMISRIYICR----RVTTSASRDEQSVCYSILTIIDSKMSS 332 (542)
Q Consensus 291 Is~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~~~~~l~~~~~~ 332 (542)
+|+..-+|...+++- |+||.++|+|+|+...+ .|.++.+.+
T Consensus 333 lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P-~p~~P~~~P 377 (419)
T KOG0663|consen 333 LSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETP-LPIDPSMFP 377 (419)
T ss_pred cchhHHHHHHHHhccCccccccHHHhhcccccccCC-CCCChhhcC
Confidence 568888887555554 99999999999998855 455555543
No 332
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=50.88 E-value=8.8 Score=36.87 Aligned_cols=59 Identities=12% Similarity=-0.069 Sum_probs=37.3
Q ss_pred hhhccccccCCCCCCccccc-c-cc----cccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD-L-EN----LYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~-l-e~----ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.+.++.++.+.+||.-.+.. . .. ...... ...+..+.++.+.++.. |+|+.+++.|||+
T Consensus 190 G~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 190 GCVLYELCTLKHPFEGENLLELALKILKGQYPPIP--SQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred HHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCC--CCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 44556667788887544322 0 11 011111 14567778888887765 9999999999996
No 333
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=50.77 E-value=8.5 Score=38.03 Aligned_cols=28 Identities=11% Similarity=0.037 Sum_probs=24.3
Q ss_pred cchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 291 ISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 291 Is~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
+++.+.+|++.++.. |+++.+++.|||+
T Consensus 257 ~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 257 VSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred cchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 377788999888866 9999999999996
No 334
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=50.34 E-value=9.4 Score=39.48 Aligned_cols=31 Identities=6% Similarity=0.006 Sum_probs=26.1
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
..++.+++|++.|+.. |+++.+++.|||++.
T Consensus 271 ~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~ 305 (345)
T cd07877 271 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 305 (345)
T ss_pred CCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhh
Confidence 3567788888887776 999999999999976
No 335
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=50.33 E-value=8.7 Score=36.27 Aligned_cols=61 Identities=16% Similarity=0.094 Sum_probs=38.5
Q ss_pred hhhccccccCCCCCCc-cccc-----c-cccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYW-ERDD-----L-ENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w-~~~~-----l-e~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.+.++..+++.|||.. .+.. + ...+.....+..++.....+.+.++.. |+++.++++|||+
T Consensus 173 G~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 173 GVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred HHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 3445556778888876 3332 1 111111112222777888888887775 9999999999996
No 336
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=50.32 E-value=6.5 Score=38.18 Aligned_cols=61 Identities=8% Similarity=-0.087 Sum_probs=38.6
Q ss_pred hhhccccccCCCCCCccccc--cccccccc--ccccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQT--CNYFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~~--~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.+.++..+.+.+||.-.+.. ....-... ..-...+..+.++++.++.. |+++.+++.|||+
T Consensus 188 G~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 188 GCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred HHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 45666777888887644332 01000000 11234567778888777755 9999999999996
No 337
>KOG0660|consensus
Probab=50.31 E-value=9.2 Score=39.91 Aligned_cols=34 Identities=6% Similarity=-0.022 Sum_probs=29.2
Q ss_pred cccccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 287 NYFSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 287 ~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.+...++.|.+|..+||.- |+|+.+||.||++..
T Consensus 278 ~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~ 315 (359)
T KOG0660|consen 278 IFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAP 315 (359)
T ss_pred HcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhh
Confidence 4568899999999777765 999999999999875
No 338
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=49.93 E-value=8.4 Score=39.61 Aligned_cols=31 Identities=6% Similarity=0.000 Sum_probs=25.8
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
..++.+.+|+++|+.. |+|+.+++.|||+..
T Consensus 269 ~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~ 303 (343)
T cd07878 269 GANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQ 303 (343)
T ss_pred CCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhc
Confidence 3556678888888876 999999999999975
No 339
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=49.86 E-value=10 Score=37.70 Aligned_cols=65 Identities=12% Similarity=-0.022 Sum_probs=39.3
Q ss_pred hhhccccccCCCCCCccccc-------cccccc------ccccc--cccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD-------LENLYL------QTCNY--FSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~-------le~ly~------~~~~~--~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.++++.++.|.+||.-.... ...+.. ..... ...++.+.++++.++.. |+|+.+++.|||+
T Consensus 190 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~ 269 (287)
T cd06621 190 GLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWI 269 (287)
T ss_pred HHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccc
Confidence 45677778888887655221 010000 00000 12345677888877764 9999999999998
Q ss_pred hhcc
Q psy15785 319 CYSI 322 (542)
Q Consensus 319 ~~~~ 322 (542)
+...
T Consensus 270 ~~~~ 273 (287)
T cd06621 270 KAQM 273 (287)
T ss_pred cccc
Confidence 5543
No 340
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=49.37 E-value=54 Score=30.22 Aligned_cols=58 Identities=14% Similarity=0.306 Sum_probs=43.0
Q ss_pred HHHhccc---cCCCCcceeHHHHHHHHHHcCC---CCCHHHHHHHHhc----CCCCcchhhhHHHHhh
Q psy15785 366 KEAFNMI---DQNRDGFIDKEDLHDMLASLGK---NPTDDYLEGMMGE----APGPINFTMFLTLFGD 423 (542)
Q Consensus 366 ~~~F~~~---D~d~dG~Is~~EL~~~L~~lg~---~~s~~ei~~l~~~----~dG~Idf~EFl~~~~~ 423 (542)
+++|..| -..+...++...|..+++..|+ .++..+++-+|.. +...|+|++|+.++..
T Consensus 2 ~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~ 69 (154)
T PF05517_consen 2 EAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAE 69 (154)
T ss_dssp HHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHH
Confidence 3444444 4566778999999999998763 5788888888887 3456999999998864
No 341
>KOG1265|consensus
Probab=49.30 E-value=1.1e+02 Score=36.07 Aligned_cols=46 Identities=17% Similarity=0.334 Sum_probs=35.8
Q ss_pred CcchhhhHHHHhhhcCCCCcHHHHHHHHhhhCCCCCCcccHHHHHHHHHH
Q psy15785 411 PINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTS 460 (542)
Q Consensus 411 ~Idf~EFl~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~ 460 (542)
..+|+.|..++..+. ...++..+|..+--++.-++|.++|..+|..
T Consensus 204 ~f~~e~f~~~l~klc----pR~eie~iF~ki~~~~kpylT~~ql~dfln~ 249 (1189)
T KOG1265|consen 204 DFTLEKFYRLLNKLC----PRPEIEEIFRKISGKKKPYLTKEQLVDFLNK 249 (1189)
T ss_pred hccHHHHHHHHHhcC----CchhHHHHHHHhccCCCccccHHHHHHHHhh
Confidence 355666666666543 2567999999998888889999999999976
No 342
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=48.57 E-value=8 Score=37.91 Aligned_cols=61 Identities=8% Similarity=0.025 Sum_probs=39.9
Q ss_pred hhhccccccCCCCCCccccc--cccccccc-ccccccchhhhhhhhHhhhc----ccch----hhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQT-CNYFSISRRTKMISRIYICR----RVTT----SASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~~-~~~~eIs~r~k~L~r~~l~~----r~ta----~~~l~h~w~ 318 (542)
.+.++..++|.|||--.+.. +..+.... ..-..++++..++++.|+.. |+++ .+++.|||+
T Consensus 209 G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 209 GCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHHHHHhCCCCCCCccHHHHHHHHHhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 45566677899987654432 11111111 11134678889999888866 9999 999999996
No 343
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=48.38 E-value=6.6 Score=38.02 Aligned_cols=67 Identities=10% Similarity=0.040 Sum_probs=41.4
Q ss_pred hhHHHHHhhhhccccccCCCCCCccccc-c-cccccc-ccc-ccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDD-L-ENLYLQ-TCN-YFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~-l-e~ly~~-~~~-~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
+.++.+ .++++..+.|.+||...+.. + +.+-.. ... -..++..+.++.+.|+.. |+++.++++|||+
T Consensus 191 ~Dv~sl--G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 191 SDIWSL--GCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred hHHHHH--HHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 344443 56666778899888665422 0 000000 000 124567788888888764 9999999999995
No 344
>KOG4578|consensus
Probab=48.24 E-value=16 Score=37.53 Aligned_cols=65 Identities=17% Similarity=0.245 Sum_probs=47.0
Q ss_pred HHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhcCCCCcchhhhHHHHhhhcCCCCcHHHHHHHHhhhCC
Q psy15785 364 NFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDE 443 (542)
Q Consensus 364 ~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~~dG~Idf~EFl~~~~~~~~~~~~~~~l~~aF~~~D~ 443 (542)
-+.=.|..+|+|+++.|...|.+.+=+ ++.. ......-.+..|+..|.
T Consensus 334 vv~w~F~qLdkN~nn~i~rrEwKpFK~-----------------------------~l~k---~s~~rkC~rk~~~yCDl 381 (421)
T KOG4578|consen 334 VVHWYFNQLDKNSNNDIERREWKPFKR-----------------------------VLLK---KSKPRKCSRKFFKYCDL 381 (421)
T ss_pred eeeeeeeeecccccCccchhhcchHHH-----------------------------HHHh---hccHHHHhhhcchhccc
Confidence 445568889999999998888754321 1111 11225567788999999
Q ss_pred CCCCcccHHHHHHHHHH
Q psy15785 444 DNSGIINEERLRELLTS 460 (542)
Q Consensus 444 d~~G~Is~eEL~~~L~~ 460 (542)
|+|-.||.+|++..|..
T Consensus 382 NkDKkISl~Ew~~CL~~ 398 (421)
T KOG4578|consen 382 NKDKKISLDEWRGCLGV 398 (421)
T ss_pred CCCceecHHHHhhhhcc
Confidence 99999999999998854
No 345
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=47.25 E-value=8.1 Score=39.56 Aligned_cols=63 Identities=17% Similarity=0.193 Sum_probs=42.6
Q ss_pred hhhccccccCCCCCCccccc--ccccccc-cccccccchhhhhhhhHhhhc----ccc-----hhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQ-TCNYFSISRRTKMISRIYICR----RVT-----TSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~-~~~~~eIs~r~k~L~r~~l~~----r~t-----a~~~l~h~w~~~ 320 (542)
.++++.++.|.|||...++. ...+... ...-..+++.+.+|+++++.+ |++ ..+++.|||+..
T Consensus 188 Gvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~ 262 (323)
T cd05615 188 GVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRR 262 (323)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCC
Confidence 56788889999999876653 1211111 111235788888998887776 776 467899999865
No 346
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=47.10 E-value=8.1 Score=37.61 Aligned_cols=61 Identities=7% Similarity=-0.045 Sum_probs=40.6
Q ss_pred hhhccccccCCCCCCccccc----ccccc--cccccccccchhhhhhhhHhhhc----ccch--hhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD----LENLY--LQTCNYFSISRRTKMISRIYICR----RVTT--SASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~----le~ly--~~~~~~~eIs~r~k~L~r~~l~~----r~ta--~~~l~h~w~ 318 (542)
.+.++..+.|.+||...+.. +.... ........++....+++++|+.. |++. +++++|||+
T Consensus 186 G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 186 GVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred HHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 56677788899998876642 11110 11111234567778888877766 9999 999999996
No 347
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=46.98 E-value=8.5 Score=39.53 Aligned_cols=63 Identities=8% Similarity=0.037 Sum_probs=39.8
Q ss_pred hhhccccccCCCCCCccc----cc--c-----ccccccccc-ccccchhhhhhhhHhhhc----ccc------hhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWER----DD--L-----ENLYLQTCN-YFSISRRTKMISRIYICR----RVT------TSASRDE 315 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~----~~--l-----e~ly~~~~~-~~eIs~r~k~L~r~~l~~----r~t------a~~~l~h 315 (542)
.++++.+++|.+||.-.. +. . +.+-..... =..++..+++|+++|+.. |++ ..++++|
T Consensus 183 G~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 183 GVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred HHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 567788889999984211 11 0 000000000 124678889999988877 876 6799999
Q ss_pred hhhhh
Q psy15785 316 QSVCY 320 (542)
Q Consensus 316 ~w~~~ 320 (542)
||+..
T Consensus 263 p~~~~ 267 (329)
T cd05588 263 PFFRN 267 (329)
T ss_pred CCCCC
Confidence 99964
No 348
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=46.96 E-value=8.6 Score=39.40 Aligned_cols=32 Identities=3% Similarity=-0.001 Sum_probs=26.0
Q ss_pred cccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 289 FSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 289 ~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
..++..+..|+++++.. |+|+.+++.|||+..
T Consensus 262 ~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~ 297 (332)
T cd07857 262 PNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAI 297 (332)
T ss_pred CCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhh
Confidence 34577788888877765 999999999999854
No 349
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=46.55 E-value=12 Score=36.17 Aligned_cols=69 Identities=9% Similarity=0.038 Sum_probs=43.6
Q ss_pred hhHHHHHhhhhccccccCCCCCCcccc-c----cccccc-cc--ccccccchhhhhhhhHhhhc----ccchhhhhhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERD-D----LENLYL-QT--CNYFSISRRTKMISRIYICR----RVTTSASRDEQS 317 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~-~----le~ly~-~~--~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w 317 (542)
+.++.+ .+.++..+.|.|||.-..+ . ...+-. .. .....++.....+++.++.. |+++.+++.|||
T Consensus 181 ~Dv~sl--G~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~ 258 (264)
T cd06623 181 ADIWSL--GLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPF 258 (264)
T ss_pred hhHHHH--HHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHH
Confidence 344444 5677777889988765541 1 011110 00 11111677788888888766 999999999999
Q ss_pred hhh
Q psy15785 318 VCY 320 (542)
Q Consensus 318 ~~~ 320 (542)
+++
T Consensus 259 ~~~ 261 (264)
T cd06623 259 IKK 261 (264)
T ss_pred HHh
Confidence 965
No 350
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=45.83 E-value=11 Score=36.99 Aligned_cols=67 Identities=7% Similarity=0.030 Sum_probs=41.0
Q ss_pred hhHHHHHhhhhccccccCCCCCCccccccc--cccc---ccccccccchhhhhhhhHhhhc---ccchhhhhhhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDDLE--NLYL---QTCNYFSISRRTKMISRIYICR---RVTTSASRDEQSV 318 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~le--~ly~---~~~~~~eIs~r~k~L~r~~l~~---r~ta~~~l~h~w~ 318 (542)
+.++.+ .++++..++|+|||....+... .+.. ....-..++..+.++++.++.. |+++.+++.|||+
T Consensus 190 ~Dv~sl--G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~p~~Rp~~~~il~~~~~ 264 (265)
T cd06652 190 ADIWSV--GCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFVEAKLRPSADELLRHTFV 264 (265)
T ss_pred hhHHHH--HHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcChhhCCCHHHHhcCccc
Confidence 344444 5677778889999864432211 1100 0111124566677788766655 9999999999997
No 351
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=45.77 E-value=11 Score=36.42 Aligned_cols=67 Identities=12% Similarity=-0.028 Sum_probs=42.4
Q ss_pred hhHHHHHhhhhccccccCCCCCCcccccc-----cccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDDL-----ENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~l-----e~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
+.++.+ .++++..+.|.|||--..+.. ...-........+++.++++.++++.. |+++.+++.|||+
T Consensus 183 ~D~~sl--G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 183 ADIWSL--GCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred hhhHHH--HHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 445554 667777888999874433210 000001111234677788888887765 9999999999995
No 352
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=45.67 E-value=11 Score=38.54 Aligned_cols=63 Identities=11% Similarity=0.010 Sum_probs=41.5
Q ss_pred hhhccccccCCCCCCccccc--ccccccc-cccccccchhhhhhhhHhhhc----ccchh----hhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQ-TCNYFSISRRTKMISRIYICR----RVTTS----ASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~-~~~~~eIs~r~k~L~r~~l~~----r~ta~----~~l~h~w~~~ 320 (542)
.++++.++.|.|||...+.. .+.+... ...-...+..+.++++.++.+ |+++. ++++|+|+..
T Consensus 183 G~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~ 256 (321)
T cd05603 183 GAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSP 256 (321)
T ss_pred chhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCC
Confidence 56788889999999876543 1111111 111124667788888888776 87664 8899999854
No 353
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=45.56 E-value=8.7 Score=36.94 Aligned_cols=61 Identities=13% Similarity=-0.020 Sum_probs=39.0
Q ss_pred hhhccccccCCCCCCccccccccccc----ccccccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDLENLYL----QTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~le~ly~----~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.+.++..+.+.|||....+....... ...--..+++.++.+++.++.. |+++.+++.|||+
T Consensus 186 G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 186 GCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 45666778899998654432100000 0011124567788888777765 9999999999996
No 354
>KOG2871|consensus
Probab=45.32 E-value=20 Score=37.59 Aligned_cols=42 Identities=14% Similarity=0.442 Sum_probs=35.9
Q ss_pred CCcHHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHH
Q psy15785 428 TDPEDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDED 469 (542)
Q Consensus 428 ~~~~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e 469 (542)
..+.+.++++|+.+|+.++|+|+-+-++.++...+..+++.+
T Consensus 305 ~~~s~q~rR~f~a~d~~d~nfis~s~~~~vm~~~N~~vse~a 346 (449)
T KOG2871|consen 305 ENPSEQLRRNFHAYDPEDNNFISCSGLQIVMTALNRLVSEPA 346 (449)
T ss_pred CCCCHHHHhhhhccCccCCCeeecHHHHHHHHHhcccccCHH
Confidence 334788999999999999999999999999998876666655
No 355
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=45.30 E-value=11 Score=39.05 Aligned_cols=30 Identities=3% Similarity=0.083 Sum_probs=25.0
Q ss_pred cchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 291 ISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 291 Is~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.+..+++|+++|+.. |+|+.+++.|||+..
T Consensus 283 ~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~ 316 (355)
T cd07874 283 KASQARDLLSKMLVIDPAKRISVDEALQHPYINV 316 (355)
T ss_pred cchHHHHHHHHHhcCCchhcCCHHHHhcCcchhc
Confidence 355678888888876 999999999999964
No 356
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=45.16 E-value=9.8 Score=45.52 Aligned_cols=68 Identities=12% Similarity=0.017 Sum_probs=45.9
Q ss_pred hHHHHHhhhhccccccCCCCCCccccc--c-ccccc-ccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 251 QLFALRHSINLDSDLLDTPDFYWERDD--L-ENLYL-QTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 251 ~l~~~r~~v~l~~~Lld~P~f~w~~~~--l-e~ly~-~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.++++ .++++.+++|.|||...+.. + ..+-. ........+..+.+|++.+|.. ||++.++|.|||+..
T Consensus 225 DVWSL--G~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~ 300 (1021)
T PTZ00266 225 DMWAL--GCIIYELCSGKTPFHKANNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKN 300 (1021)
T ss_pred HHHHH--HHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhh
Confidence 45544 67888889999998754432 1 11100 0111234577888999888876 999999999999975
No 357
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=44.79 E-value=11 Score=37.68 Aligned_cols=27 Identities=4% Similarity=0.053 Sum_probs=22.5
Q ss_pred chhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 292 SRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 292 s~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
++.+.+|++.|+.. |+|+.++++|||+
T Consensus 280 ~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 280 DPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred CHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 45566788888876 9999999999996
No 358
>KOG0694|consensus
Probab=44.51 E-value=10 Score=42.81 Aligned_cols=63 Identities=13% Similarity=0.179 Sum_probs=48.1
Q ss_pred hhhccccccCCCCCCccccc--cccccccccccc-ccchhhhhhhhHhhhc----ccc-----hhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYLQTCNYF-SISRRTKMISRIYICR----RVT-----TSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~~~~~~~-eIs~r~k~L~r~~l~~----r~t-----a~~~l~h~w~~~ 320 (542)
.|.+|.+|+|-|||-+++++ .+.+-..-..|. -+|..+..+.+.++.+ |+- +.++..||.+++
T Consensus 555 GVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~ 629 (694)
T KOG0694|consen 555 GVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRS 629 (694)
T ss_pred HHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCcccc
Confidence 57889999999999999987 355544444443 3888999998888877 543 567788999876
No 359
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=44.43 E-value=13 Score=38.17 Aligned_cols=33 Identities=6% Similarity=-0.032 Sum_probs=27.5
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhhhhcc
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSVCYSI 322 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~~ 322 (542)
..++..++|+++|+.. |+|+.++++|||++...
T Consensus 272 ~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 272 VFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred cccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 3567788899888876 99999999999997644
No 360
>KOG0198|consensus
Probab=43.51 E-value=13 Score=38.58 Aligned_cols=32 Identities=19% Similarity=0.088 Sum_probs=28.7
Q ss_pred cchhhhhhhhHhhhc----ccchhhhhhhhhhhhcc
Q psy15785 291 ISRRTKMISRIYICR----RVTTSASRDEQSVCYSI 322 (542)
Q Consensus 291 Is~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~~ 322 (542)
+|+.+++++++++.+ |+||.++|+|||.+...
T Consensus 248 ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 248 LSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred cCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence 899999999998887 99999999999997643
No 361
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=43.38 E-value=12 Score=38.40 Aligned_cols=63 Identities=10% Similarity=0.092 Sum_probs=41.1
Q ss_pred hhhccccccCCCCCCccccc--c---ccccc----c-cccccccchhhhhhhhHhhhc----ccch------hhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--L---ENLYL----Q-TCNYFSISRRTKMISRIYICR----RVTT------SASRDEQS 317 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--l---e~ly~----~-~~~~~eIs~r~k~L~r~~l~~----r~ta------~~~l~h~w 317 (542)
.++++.++.|.|||....+. . +.++. . ...-..++..+++++++++.. |+++ .++++|||
T Consensus 183 Gvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~ 262 (327)
T cd05617 183 GVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTF 262 (327)
T ss_pred HHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCC
Confidence 56778888999999653321 1 11110 0 111124678889999888877 8875 48999999
Q ss_pred hhh
Q psy15785 318 VCY 320 (542)
Q Consensus 318 ~~~ 320 (542)
+..
T Consensus 263 f~~ 265 (327)
T cd05617 263 FRS 265 (327)
T ss_pred CCC
Confidence 865
No 362
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=43.35 E-value=12 Score=38.55 Aligned_cols=31 Identities=3% Similarity=0.008 Sum_probs=26.4
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.+++.+.+++++++.. |+|+.+++.|||+..
T Consensus 259 ~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~ 293 (328)
T cd07856 259 NADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAP 293 (328)
T ss_pred CCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcccc
Confidence 4677888899888866 999999999999964
No 363
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=43.01 E-value=11 Score=37.70 Aligned_cols=63 Identities=14% Similarity=0.058 Sum_probs=41.3
Q ss_pred hhhccccccCCCCCCccccc--cccccc-ccccccccchhhhhhhhHhhhc----cc-----chhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYL-QTCNYFSISRRTKMISRIYICR----RV-----TTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~-~~~~~~eIs~r~k~L~r~~l~~----r~-----ta~~~l~h~w~~~ 320 (542)
.+.++.++.|.+||...++. ...+.. ...--..++.+.++++++++.. |+ ++.+++.|||+..
T Consensus 185 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 259 (290)
T cd05580 185 GILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAG 259 (290)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCccccc
Confidence 56777788899998655432 111110 0000123578889999888876 77 8899999999865
No 364
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=41.42 E-value=13 Score=37.00 Aligned_cols=64 Identities=9% Similarity=0.091 Sum_probs=42.2
Q ss_pred hhhccccccCCCCCCccccc--cccccc-----ccccccccchhhhhhhhHhhhc----ccc-----hhhhhhhhhhhhc
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYL-----QTCNYFSISRRTKMISRIYICR----RVT-----TSASRDEQSVCYS 321 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~-----~~~~~~eIs~r~k~L~r~~l~~----r~t-----a~~~l~h~w~~~~ 321 (542)
.+.++..+.|.+||....+. .+.+.. .......++..+.+|.+.++.. |++ +.+++.|+|+...
T Consensus 188 G~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 188 GCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 46677788899998765442 111111 1111245777788888777765 888 7899999999764
No 365
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=41.34 E-value=11 Score=36.83 Aligned_cols=61 Identities=11% Similarity=-0.088 Sum_probs=37.6
Q ss_pred hhhccccccCCCCCCcccccc--cccccc-ccc-ccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL--ENLYLQ-TCN-YFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l--e~ly~~-~~~-~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.++++.++++.+||....... ..+... ... -..++..+.++++.++.. |+++.+++.|||+
T Consensus 192 G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 192 GCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred HHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 455666777888875333210 111000 011 124667788888888755 9999999999996
No 366
>KOG0581|consensus
Probab=41.24 E-value=15 Score=38.48 Aligned_cols=38 Identities=8% Similarity=-0.031 Sum_probs=31.4
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhhhhcccccch
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSVCYSILTIID 327 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~~~~~l~ 327 (542)
.-|+..++++-.+|.+ |.++++++.|||++.......+
T Consensus 306 ~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~~vd 347 (364)
T KOG0581|consen 306 EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFEDPNVD 347 (364)
T ss_pred cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccccccc
Confidence 4788899999888888 9999999999999875544433
No 367
>KOG2243|consensus
Probab=39.72 E-value=32 Score=41.71 Aligned_cols=55 Identities=20% Similarity=0.394 Sum_probs=43.5
Q ss_pred HHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhc----CCCCcchhhhHHHHh
Q psy15785 367 EAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE----APGPINFTMFLTLFG 422 (542)
Q Consensus 367 ~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~----~dG~Idf~EFl~~~~ 422 (542)
..|..+|+||.|.|+..+|.+++..- ...++.+++-++.- .+...+|.+|+.-+.
T Consensus 4061 dtfkeydpdgkgiiskkdf~kame~~-k~ytqse~dfllscae~dend~~~y~dfv~rfh 4119 (5019)
T KOG2243|consen 4061 DTFKEYDPDGKGIISKKDFHKAMEGH-KHYTQSEIDFLLSCAEADENDMFDYEDFVDRFH 4119 (5019)
T ss_pred ccchhcCCCCCccccHHHHHHHHhcc-ccchhHHHHHHHHhhccCccccccHHHHHHHhc
Confidence 45678899999999999999999753 34677777777764 567899999987653
No 368
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=38.84 E-value=13 Score=36.00 Aligned_cols=61 Identities=8% Similarity=-0.216 Sum_probs=38.5
Q ss_pred hhhccccccCCCCCCcccccc--cccccc-c-ccccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL--ENLYLQ-T-CNYFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l--e~ly~~-~-~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.+.++..+.+.+||-..+... ...... . .....+++.++.+++.++.. |+|+.+++.|||+
T Consensus 188 G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 188 GCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred HHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 455566677888876654431 111110 0 01123677788888877765 9999999999996
No 369
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=38.09 E-value=17 Score=36.20 Aligned_cols=28 Identities=7% Similarity=0.053 Sum_probs=24.7
Q ss_pred cchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 291 ISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 291 Is~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
+++.+++|++.|+.. |+|+.+++.|||+
T Consensus 262 ~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 262 LSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred CChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 477788899888877 9999999999996
No 370
>KOG0579|consensus
Probab=38.05 E-value=23 Score=40.05 Aligned_cols=30 Identities=13% Similarity=0.053 Sum_probs=26.1
Q ss_pred chhhhhhhhHhhhc----ccchhhhhhhhhhhhc
Q psy15785 292 SRRTKMISRIYICR----RVTTSASRDEQSVCYS 321 (542)
Q Consensus 292 s~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~ 321 (542)
|...+++.+++|.+ |++++++++|||+++.
T Consensus 262 s~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~ 295 (1187)
T KOG0579|consen 262 SRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNA 295 (1187)
T ss_pred hhHHHHHHHHHHhcCCccCCCHHHHhhCcccccC
Confidence 45678999999888 9999999999999863
No 371
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=37.99 E-value=16 Score=40.19 Aligned_cols=67 Identities=21% Similarity=0.109 Sum_probs=46.0
Q ss_pred hhHHHHHhhhhccccccCCCCCCccccc------ccccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhh
Q psy15785 250 GQLFALRHSINLDSDLLDTPDFYWERDD------LENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVC 319 (542)
Q Consensus 250 G~l~~~r~~v~l~~~Lld~P~f~w~~~~------le~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~ 319 (542)
+.++++ .++++.++.|.+||...+.. +...+.. .-..+++.++.|++.++.. |+++.+++.|||.+
T Consensus 226 ~DVwSl--GvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~ 301 (496)
T PTZ00283 226 ADMFSL--GVLLYELLTLKRPFDGENMEEVMHKTLAGRYDP--LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICK 301 (496)
T ss_pred HHHHHH--HHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCC--CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHH
Confidence 344443 56778888999998765542 1111111 1135788899999888876 99999999999976
Q ss_pred h
Q psy15785 320 Y 320 (542)
Q Consensus 320 ~ 320 (542)
.
T Consensus 302 ~ 302 (496)
T PTZ00283 302 L 302 (496)
T ss_pred H
Confidence 5
No 372
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=37.87 E-value=16 Score=37.41 Aligned_cols=30 Identities=13% Similarity=0.103 Sum_probs=25.1
Q ss_pred cchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 291 ISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 291 Is~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
++....+++++++.. |+|+.+++.|||+..
T Consensus 267 ~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~ 300 (337)
T cd07852 267 ASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ 300 (337)
T ss_pred CCHHHHHHHHHhccCCcccccCHHHHhhChhhhh
Confidence 567778888777766 999999999999965
No 373
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=36.66 E-value=14 Score=33.73 Aligned_cols=63 Identities=22% Similarity=0.129 Sum_probs=40.2
Q ss_pred hhhccccccCCCCCCccccc---cccccccc--------ccccccch--hhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD---LENLYLQT--------CNYFSISR--RTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~---le~ly~~~--------~~~~eIs~--r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.++++.++.+.|||.-..+. +..+.... .....+++ ..+++++.++.. |+++.+++.|+|...
T Consensus 91 G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 91 GITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 66778888999998654332 11111111 11123333 578888877766 999999999999754
No 374
>KOG0659|consensus
Probab=36.64 E-value=19 Score=36.37 Aligned_cols=36 Identities=11% Similarity=-0.036 Sum_probs=28.2
Q ss_pred cccccchhhhhhhhHhhhc----ccchhhhhhhhhhhhcc
Q psy15785 287 NYFSISRRTKMISRIYICR----RVTTSASRDEQSVCYSI 322 (542)
Q Consensus 287 ~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~~ 322 (542)
-+...++.+-+|...|+.- |+|++++++|+|++..+
T Consensus 249 lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P 288 (318)
T KOG0659|consen 249 LFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLP 288 (318)
T ss_pred ccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCC
Confidence 3455677777887766654 99999999999998744
No 375
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=36.61 E-value=2.4e+02 Score=25.08 Aligned_cols=89 Identities=19% Similarity=0.250 Sum_probs=46.3
Q ss_pred CCHHHHHHHHHHhccccCCC--CcceeHHHHHHHHHHcCCCCCHHHHHHHHhcCCCCcchhhh-HHHHhhhcCCCCcHHH
Q psy15785 357 FDQAQIQNFKEAFNMIDQNR--DGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGPINFTMF-LTLFGDRLQGTDPEDV 433 (542)
Q Consensus 357 ls~~ei~~l~~~F~~~D~d~--dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~~dG~Idf~EF-l~~~~~~~~~~~~~~~ 433 (542)
+..=++..+.++|+...-+. +..++..++..+|..+- ..+-++..+..+.... +..+. .-.
T Consensus 35 l~lv~l~~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~iy--------~~l~~~~p~~~~i~~~~v~~a~--------~L~ 98 (127)
T PF09068_consen 35 LDLVDLSNVIEAFREHGLNQSNDSSLSVSQLETLLSSIY--------EFLNKRLPTLHQIPSRPVDLAV--------DLL 98 (127)
T ss_dssp GGG--HHHHHHHHHHTT---T-TSEEEHHHHHHHHHHHH--------HHHHHHSTTS--HH-----HHH--------HHH
T ss_pred heeeeHHHHHHHHHHcCCCcccCCCCCHHHHHHHHHHHH--------HHHHHHCCCCCCCCchhHHHHH--------HHH
Confidence 44445666777777665442 46789999888886531 0111111222221100 00111 223
Q ss_pred HHHHHhhhCCCCCCcccHHHHHHHHHHc
Q psy15785 434 IKNAFGCFDEDNSGIINEERLRELLTSM 461 (542)
Q Consensus 434 l~~aF~~~D~d~~G~Is~eEL~~~L~~~ 461 (542)
+......||++++|.|+.-.++.+|..+
T Consensus 99 ln~Ll~vyD~~rtG~I~vls~KvaL~~L 126 (127)
T PF09068_consen 99 LNWLLNVYDSQRTGKIRVLSFKVALITL 126 (127)
T ss_dssp HHHHHHHH-TT--SEEEHHHHHHHHHHT
T ss_pred HHHHHHHhCCCCCCeeehhHHHHHHHHh
Confidence 5667889999999999999999988653
No 376
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=36.54 E-value=18 Score=35.87 Aligned_cols=63 Identities=10% Similarity=0.032 Sum_probs=40.6
Q ss_pred hhhccccccCCCCCCccccc---------c-c---ccc-c--ccccccccchhhhhhhhHhhhc----ccchhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD---------L-E---NLY-L--QTCNYFSISRRTKMISRIYICR----RVTTSASRDEQS 317 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~---------l-e---~ly-~--~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w 317 (542)
.+.++..+.|.+||.-..+. . + ... . .......++..+.+|+++++.. |+|+.++++|+|
T Consensus 189 G~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~ 268 (284)
T cd06620 189 GISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPP 268 (284)
T ss_pred HHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 45667778899998755431 0 0 000 0 0011123666788888888766 999999999999
Q ss_pred hhh
Q psy15785 318 VCY 320 (542)
Q Consensus 318 ~~~ 320 (542)
+..
T Consensus 269 ~~~ 271 (284)
T cd06620 269 FIQ 271 (284)
T ss_pred ccc
Confidence 865
No 377
>PLN02952 phosphoinositide phospholipase C
Probab=36.19 E-value=1.8e+02 Score=33.04 Aligned_cols=85 Identities=6% Similarity=-0.022 Sum_probs=57.8
Q ss_pred CCcceeHHHHHHHHHHcC--CCCCHHHHHHHHhc---CCCCcchhhhHHHHhhhcCCC-CcHHHHHHHHhhh-------C
Q psy15785 376 RDGFIDKEDLHDMLASLG--KNPTDDYLEGMMGE---APGPINFTMFLTLFGDRLQGT-DPEDVIKNAFGCF-------D 442 (542)
Q Consensus 376 ~dG~Is~~EL~~~L~~lg--~~~s~~ei~~l~~~---~dG~Idf~EFl~~~~~~~~~~-~~~~~l~~aF~~~-------D 442 (542)
+.|.++.+++..+.+.+. ......++..++.+ +.+.++.++|..++...+... .+.+....+|..+ .
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~~ 92 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGGGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHVT 92 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhccccc
Confidence 468999999988777664 23467888888886 456899999999988755432 3344445554433 1
Q ss_pred CCCCCcccHHHHHHHHHH
Q psy15785 443 EDNSGIINEERLRELLTS 460 (542)
Q Consensus 443 ~d~~G~Is~eEL~~~L~~ 460 (542)
..+.+.++.+.|...|.+
T Consensus 93 ~~~~~~l~~~~F~~~l~s 110 (599)
T PLN02952 93 RYTRHGLNLDDFFHFLLY 110 (599)
T ss_pred cccccCcCHHHHHHHHcC
Confidence 123355899999888853
No 378
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=35.67 E-value=20 Score=35.71 Aligned_cols=33 Identities=9% Similarity=-0.025 Sum_probs=27.7
Q ss_pred cccchhhhhhhhHhhhc----ccchhhhhhhhhhhhc
Q psy15785 289 FSISRRTKMISRIYICR----RVTTSASRDEQSVCYS 321 (542)
Q Consensus 289 ~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~ 321 (542)
..+++.+.+++++++.. |+++.+++.|||+...
T Consensus 254 ~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~ 290 (294)
T PLN00009 254 PTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL 290 (294)
T ss_pred cCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence 35778888899888766 9999999999999764
No 379
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=35.13 E-value=20 Score=35.03 Aligned_cols=61 Identities=11% Similarity=-0.045 Sum_probs=39.9
Q ss_pred hhhccccccCCCCCCcccccc--cccccc---cccccccchhhhhhhhHhhhc---ccchhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDDL--ENLYLQ---TCNYFSISRRTKMISRIYICR---RVTTSASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l--e~ly~~---~~~~~eIs~r~k~L~r~~l~~---r~ta~~~l~h~w~ 318 (542)
.++++..++|.|||.-..... ....-. ..-...+++.++++++.++.. |+++...+.|||.
T Consensus 196 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 196 ACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFVEEKRRPTAEFLLRHPFV 264 (264)
T ss_pred HHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhcCcccCccHHHHhcCCCC
Confidence 567788888999975432221 111100 111235778888998777766 9999999999984
No 380
>KOG0039|consensus
Probab=34.81 E-value=65 Score=36.95 Aligned_cols=44 Identities=30% Similarity=0.576 Sum_probs=36.7
Q ss_pred CCCcchhhhHHHHhhhcCCCCcHHHHHHHHhhhCCCCCCcccHHHHHHHHHH
Q psy15785 409 PGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERLRELLTS 460 (542)
Q Consensus 409 dG~Idf~EFl~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~ 460 (542)
+| ++++||. ....+.++.++..|.++|. ++|.++.+++..++..
T Consensus 2 ~~-~~~~~~~------~~~~~~d~~l~~~f~~~~~-~~~~~~~~~~~~~~~~ 45 (646)
T KOG0039|consen 2 EG-ISFQELK------ITDCSYDDKLQTFFDMYDK-GDGKLTEEEVRELIMS 45 (646)
T ss_pred CC-cchhhhc------ccCCChhHHHHHHHHHHhh-hcCCccHHHHHHHHHH
Confidence 56 8999988 2344558899999999997 9999999999998865
No 381
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=34.12 E-value=21 Score=36.75 Aligned_cols=32 Identities=6% Similarity=-0.084 Sum_probs=26.7
Q ss_pred cchhhhhhhhHhhhc----ccchhhhhhhhhhhhcc
Q psy15785 291 ISRRTKMISRIYICR----RVTTSASRDEQSVCYSI 322 (542)
Q Consensus 291 Is~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~~ 322 (542)
.+..+++|+++|+.. |+|+.+++.|||++...
T Consensus 271 ~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 306 (333)
T cd06650 271 FGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE 306 (333)
T ss_pred cCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence 456778899888876 99999999999997643
No 382
>KOG3866|consensus
Probab=33.79 E-value=1.4e+02 Score=30.84 Aligned_cols=26 Identities=35% Similarity=0.716 Sum_probs=21.9
Q ss_pred HHHhccccCCCCcceeHHHHHHHHHH
Q psy15785 366 KEAFNMIDQNRDGFIDKEDLHDMLAS 391 (542)
Q Consensus 366 ~~~F~~~D~d~dG~Is~~EL~~~L~~ 391 (542)
+..|...|.|+||.++-.||..++..
T Consensus 247 KTFF~LHD~NsDGfldeqELEaLFtk 272 (442)
T KOG3866|consen 247 KTFFALHDLNSDGFLDEQELEALFTK 272 (442)
T ss_pred chheeeeccCCcccccHHHHHHHHHH
Confidence 45688899999999999999887753
No 383
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=33.76 E-value=21 Score=35.07 Aligned_cols=30 Identities=10% Similarity=0.009 Sum_probs=25.7
Q ss_pred cccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 289 FSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 289 ~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
..++..++++++.++.. |+++.+++.|||+
T Consensus 250 ~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 250 PNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 34678888999888876 9999999999996
No 384
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=33.39 E-value=17 Score=39.81 Aligned_cols=63 Identities=14% Similarity=0.063 Sum_probs=43.4
Q ss_pred hhhccccccCCCCCCccccc--cccccc-ccc-cccccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYL-QTC-NYFSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~-~~~-~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.++++.+++|.|||...+.. +..+-. ... ....++..++.|++.++.. |+++.+++.|+|+..
T Consensus 258 G~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 258 GVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 56778888999999765542 111110 111 1135778889999888876 999999999999865
No 385
>PHA03210 serine/threonine kinase US3; Provisional
Probab=33.18 E-value=23 Score=39.00 Aligned_cols=33 Identities=3% Similarity=-0.190 Sum_probs=25.7
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhhhhcc
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSVCYSI 322 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~~ 322 (542)
.++....+++++||.. |+|+.+++.|||+....
T Consensus 425 ~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~ 461 (501)
T PHA03210 425 GLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEE 461 (501)
T ss_pred CCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCC
Confidence 3556667777777776 99999999999997643
No 386
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=32.40 E-value=25 Score=34.88 Aligned_cols=64 Identities=11% Similarity=0.085 Sum_probs=42.3
Q ss_pred hhhccccccCCCCCCcccccc------cccccccccc-cccchhhhhhhhHhhhc----cc-----chhhhhhhhhhhhc
Q psy15785 258 SINLDSDLLDTPDFYWERDDL------ENLYLQTCNY-FSISRRTKMISRIYICR----RV-----TTSASRDEQSVCYS 321 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~l------e~ly~~~~~~-~eIs~r~k~L~r~~l~~----r~-----ta~~~l~h~w~~~~ 321 (542)
.++++..+.|.+||....+.. ..+......+ ..+++...++.++++.. |+ ++.+++.|||+...
T Consensus 195 G~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 274 (290)
T cd05613 195 GVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKI 274 (290)
T ss_pred HHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccC
Confidence 667788889999987554321 1111111222 23677788888888776 76 78999999999663
No 387
>PF06200 tify: tify domain; InterPro: IPR010399 The tify domain is a 36-amino acid domain only found among Embryophyta (land plants). It has been named after the most conserved amino acid pattern (TIF[F/Y]XG) it contains, but was previously known as the Zim domain. As the use of uppercase characters (TIFY) might imply that the domain is fully conserved across proteins, a lowercase lettering has been chosen in an attempt to highlight the reality of its natural variability. Based on the domain architecture, tify domain containing proteins can be classified into two groups. Group I is formed by proteins possessing a CCT (CONSTANS, CO-like, and TOC1) domain and a GATA-type zinc finger in addition to the tify domain. Group II contains proteins characterised by the tify domain but lacking a GATA-type zinc finger. Tify domain containing proteins might be involved in developmental processes and some of them have features that are characteristic for transcription factors: a nuclear localisation and the presence of a putative DNA-binding domain []. Some proteins known to contain a tify domain include: Arabidopsis thaliana Zinc-finger protein expressed in Inflorescence Meristem (ZIM), a putative transcription factor involved in inflorescence and flower development [, ]. A. thaliana ZIM-like proteins (ZML) []. A. thaliana PEAPOD1 and PEAPOD2 (PPD1 and PPD2) [].
Probab=31.97 E-value=1.1e+02 Score=21.12 Aligned_cols=28 Identities=11% Similarity=0.280 Sum_probs=22.8
Q ss_pred ceEEEEcCCcEEEec-CCHHHHHHHHHHH
Q psy15785 57 RFIYFFQEGSLVAWN-VSDLEIENLLEFL 84 (542)
Q Consensus 57 ~~~f~F~~G~vV~w~-~~~~~~~~~l~~l 84 (542)
..+-||-.|.|..++ ++++..+.++...
T Consensus 6 ~qLTIfY~G~V~Vfd~v~~~Ka~~im~lA 34 (36)
T PF06200_consen 6 AQLTIFYGGQVCVFDDVPPDKAQEIMLLA 34 (36)
T ss_pred CcEEEEECCEEEEeCCCCHHHHHHHHHHh
Confidence 457788999998888 9999888887654
No 388
>KOG1290|consensus
Probab=31.59 E-value=41 Score=36.87 Aligned_cols=15 Identities=13% Similarity=-0.018 Sum_probs=14.2
Q ss_pred ccchhhhhhhhhhhh
Q psy15785 306 RVTTSASRDEQSVCY 320 (542)
Q Consensus 306 r~ta~~~l~h~w~~~ 320 (542)
|+||+++|+|||+..
T Consensus 541 R~tA~~cl~hPwLn~ 555 (590)
T KOG1290|consen 541 RPTAAQCLKHPWLNP 555 (590)
T ss_pred cccHHHHhcCccccC
Confidence 999999999999976
No 389
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=30.99 E-value=1.3e+02 Score=25.07 Aligned_cols=79 Identities=13% Similarity=0.173 Sum_probs=37.7
Q ss_pred CcceeHHHHHHHHHHcC--CCCCHHHHHHHHhc----CCCCcchhhhHHHHhhhcCCCCcHHHHHHHHhhhCCCCCCccc
Q psy15785 377 DGFIDKEDLHDMLASLG--KNPTDDYLEGMMGE----APGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIIN 450 (542)
Q Consensus 377 dG~Is~~EL~~~L~~lg--~~~s~~ei~~l~~~----~dG~Idf~EFl~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~Is 450 (542)
||.++..|...+-.-+. +.++..+...++.. .....++.+|...+............+...++.--- ||.++
T Consensus 13 DG~v~~~E~~~i~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~L~~vA~A--DG~~~ 90 (104)
T cd07313 13 DGEYDEEERAAIDRLLAERFGLDAEEAAELLAEAEALEEEAPDLYEFTSLIKEHFDYEERLELVEALWEVAYA--DGELD 90 (104)
T ss_pred cCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh--cCCCC
Confidence 45555555443322211 12334444444332 345577778877766433111223334445555433 47777
Q ss_pred HHHHHHH
Q psy15785 451 EERLREL 457 (542)
Q Consensus 451 ~eEL~~~ 457 (542)
..|-.-+
T Consensus 91 ~~E~~~l 97 (104)
T cd07313 91 EYEEHLI 97 (104)
T ss_pred HHHHHHH
Confidence 7776543
No 390
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=30.70 E-value=27 Score=36.04 Aligned_cols=32 Identities=6% Similarity=-0.062 Sum_probs=27.1
Q ss_pred cccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 289 FSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 289 ~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
..+++.+.++++.|+.. |+|+.+++.|||++.
T Consensus 268 ~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~ 303 (343)
T cd07880 268 PNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEE 303 (343)
T ss_pred cCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhh
Confidence 35677788888888877 999999999999976
No 391
>KOG4347|consensus
Probab=30.45 E-value=44 Score=37.58 Aligned_cols=73 Identities=15% Similarity=0.192 Sum_probs=48.3
Q ss_pred eeHHHHHHHHHHcCC-CCCHHHHHHHHhc----CCCCcchhhhHHHHhhhcCCCCcHHHHHHHHhhhCCCCCCcccHHHH
Q psy15785 380 IDKEDLHDMLASLGK-NPTDDYLEGMMGE----APGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDNSGIINEERL 454 (542)
Q Consensus 380 Is~~EL~~~L~~lg~-~~s~~ei~~l~~~----~dG~Idf~EFl~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~Is~eEL 454 (542)
|+...+...++.+-. ..+..-+..++.. ++|.++|.+++..+.... ..+..++++-.|+++|.+++ ....++.
T Consensus 535 i~~~~f~~~f~~l~pw~~s~~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~-~~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 535 IDYAQFLEVFRELLPWAVSLIFLERLFRLLDDSMTGLLTFKDLVSGLSILK-AGDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHhhHHHHhhccCchhHHHHHHHHHHHhcccCCcceeEHHHHHHHHHHHH-hhhHHHHHHHHHhhccCCcc-ccccccc
Confidence 445556666655431 1222223344443 678899999988887643 34447889999999999998 8888877
No 392
>KOG0201|consensus
Probab=28.89 E-value=58 Score=35.17 Aligned_cols=129 Identities=12% Similarity=0.017 Sum_probs=78.1
Q ss_pred eeeeeccCceEeeccchH-HHHHHHHHHhhhhccchhhHhhhhcccccccccCcchHHHHHHhhhHHHHHhhh-----hc
Q psy15785 188 FIYFFQEGSLVAWNVSDL-EIENLLEFLKQFEIKPYEKAVVLNEKELMNYTYSPNIREVLQKTGQLFALRHSI-----NL 261 (542)
Q Consensus 188 ~~~~~~~g~~~~w~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~e~~~~~~~~~~~~~~~~~G~l~~~r~~v-----~l 261 (542)
-|+|-.+|.|+.|+|-=. ++.+....=.-|.--||= -..||++ +.-...+++| ..
T Consensus 141 nil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfw-----------------MAPEVI~--~~~Y~~KADIWSLGITa 201 (467)
T KOG0201|consen 141 NILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTPFW-----------------MAPEVIK--QSGYDTKADIWSLGITA 201 (467)
T ss_pred ceeEeccCcEEEEecceeeeeechhhccccccccccc-----------------cchhhhc--cccccchhhhhhhhHHH
Confidence 378888899999997521 111111111233333432 2357777 5555556554 45
Q ss_pred cccccCCCCCCccccc----c--cccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhhcccccchhHHH
Q psy15785 262 DSDLLDTPDFYWERDD----L--ENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCYSILTIIDSKMS 331 (542)
Q Consensus 262 ~~~Lld~P~f~w~~~~----l--e~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~~~~~~l~~~~~ 331 (542)
+-+.-|.||+---+|- + +.-.=.+.. .-|+-.++|+..+|.+ |++|.++|+|++++.+.....-.+..
T Consensus 202 iEla~GePP~s~~hPmrvlflIpk~~PP~L~~--~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~k~s~L~~~i 279 (467)
T KOG0201|consen 202 IELAKGEPPHSKLHPMRVLFLIPKSAPPRLDG--DFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAKKTSELKELI 279 (467)
T ss_pred HHHhcCCCCCcccCcceEEEeccCCCCCcccc--ccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcCCchHHHHHH
Confidence 6678899998877763 0 111111122 4577789999888887 99999999999998855444334444
Q ss_pred Hhhhhc
Q psy15785 332 SRKTAG 337 (542)
Q Consensus 332 ~~~~~~ 337 (542)
.|.++.
T Consensus 280 ~r~~~~ 285 (467)
T KOG0201|consen 280 DRYKRW 285 (467)
T ss_pred HHHHHH
Confidence 444443
No 393
>KOG0668|consensus
Probab=28.53 E-value=31 Score=34.25 Aligned_cols=30 Identities=10% Similarity=0.047 Sum_probs=21.9
Q ss_pred cchhhhhhhhHhh----hcccchhhhhhhhhhhh
Q psy15785 291 ISRRTKMISRIYI----CRRVTTSASRDEQSVCY 320 (542)
Q Consensus 291 Is~r~k~L~r~~l----~~r~ta~~~l~h~w~~~ 320 (542)
+++.+-+|.-++| ..|+||.+|+.|||+..
T Consensus 294 ~~peaiDlldklLrYDHqeRlTakEam~HpyF~~ 327 (338)
T KOG0668|consen 294 VSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAP 327 (338)
T ss_pred CChHHHHHHHHHHhhccccccchHHHhcCchHHH
Confidence 3677777763333 33999999999999854
No 394
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=28.34 E-value=76 Score=28.83 Aligned_cols=37 Identities=24% Similarity=0.417 Sum_probs=24.4
Q ss_pred CCCcchhhhHHHHhhhcCCCCcHHHHHHHHhhhCCCC
Q psy15785 409 PGPINFTMFLTLFGDRLQGTDPEDVIKNAFGCFDEDN 445 (542)
Q Consensus 409 dG~Idf~EFl~~~~~~~~~~~~~~~l~~aF~~~D~d~ 445 (542)
.+.|+|+.|..+|...+....+.+-.+..|..|-...
T Consensus 46 ~~~Id~egF~~Fm~~yLe~d~P~~lc~hLF~sF~~~~ 82 (138)
T PF14513_consen 46 EEPIDYEGFKLFMKTYLEVDLPEDLCQHLFLSFQKKP 82 (138)
T ss_dssp TTEE-HHHHHHHHHHHTT-S--HHHHHHHHHHS----
T ss_pred CCCcCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCcc
Confidence 5689999999999887766677888888888886543
No 395
>KOG0662|consensus
Probab=28.24 E-value=29 Score=33.09 Aligned_cols=43 Identities=14% Similarity=0.258 Sum_probs=31.7
Q ss_pred ccccccccccccc----chhhhhhh-hHhhhc---ccchhhhhhhhhhhhc
Q psy15785 279 ENLYLQTCNYFSI----SRRTKMIS-RIYICR---RVTTSASRDEQSVCYS 321 (542)
Q Consensus 279 e~ly~~~~~~~eI----s~r~k~L~-r~~l~~---r~ta~~~l~h~w~~~~ 321 (542)
-++|-....|..| +.+-++|. +++.|+ |++|.+++.||++...
T Consensus 239 yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 239 YPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred cCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 4567777777665 45557777 555555 9999999999998653
No 396
>KOG0671|consensus
Probab=27.98 E-value=30 Score=36.69 Aligned_cols=26 Identities=12% Similarity=-0.046 Sum_probs=20.9
Q ss_pred hhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 295 TKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 295 ~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.-+|+++||.- |+|+.+||.|||+..
T Consensus 382 LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~ 411 (415)
T KOG0671|consen 382 LFDLLRRMLEFDPARRITLREALSHPFFAR 411 (415)
T ss_pred HHHHHHHHHccCccccccHHHHhcCHHhhc
Confidence 34556777765 999999999999965
No 397
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=26.89 E-value=2.7e+02 Score=26.32 Aligned_cols=70 Identities=19% Similarity=0.284 Sum_probs=45.1
Q ss_pred EEEEEeccccChhhHHhhhhcC-CccceecccccccCCCCceEEEeeeccCCCCceEEEEcCCcEEEecCC-HHHHHHHH
Q psy15785 4 VVAFSTAQEYDIDNLKKGIVGK-DLYELIEFDDNMQNGENSIQVIAKYQVGKEPRFIYFFQEGSLVAWNVS-DLEIENLL 81 (542)
Q Consensus 4 v~a~~~a~~~~l~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~F~~G~vV~w~~~-~~~~~~~l 81 (542)
|.+.-+-.++||+.++-.+... --|+|-.|+.- -|...+..--+-+|.+|-+|+=|-. +++...-+
T Consensus 105 VaSadL~~~lnL~~iA~~lg~e~~eYEPEqFPGL------------VYRl~~P~VV~LiF~SGK~ViTGaK~~ed~~~Av 172 (185)
T COG2101 105 VASADLGVELNLNAIAIGLGLENIEYEPEQFPGL------------VYRLDEPRVVLLLFGSGKLVITGAKSEEDAEQAV 172 (185)
T ss_pred EEEeccCccccHHHHHHhccccccccccccCCee------------EEEcCCCCEEEEEecCCcEEEecCCCHHHHHHHH
Confidence 4555667889999999999431 22555444421 1444444456789999999999965 44555555
Q ss_pred HHHH
Q psy15785 82 EFLK 85 (542)
Q Consensus 82 ~~l~ 85 (542)
+.+.
T Consensus 173 ~~i~ 176 (185)
T COG2101 173 EKIQ 176 (185)
T ss_pred HHHH
Confidence 5554
No 398
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=26.41 E-value=26 Score=33.84 Aligned_cols=61 Identities=11% Similarity=-0.050 Sum_probs=37.8
Q ss_pred hhhccccccCCCCCCccccc--cccccc-cccc-ccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD--LENLYL-QTCN-YFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~--le~ly~-~~~~-~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.++++.++.+.+||...++. ...+.. .... -..++...++++..++.. |+++.++++|||+
T Consensus 188 G~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 188 GCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 44556667788887654432 111110 0000 134677788888777765 9999999999985
No 399
>PLN02222 phosphoinositide phospholipase C 2
Probab=25.77 E-value=2.2e+02 Score=32.24 Aligned_cols=38 Identities=26% Similarity=0.487 Sum_probs=27.9
Q ss_pred cHHHHHHHHhhhCCCCCCcccHHHHHHHHHHcC-C-CCCHHH
Q psy15785 430 PEDVIKNAFGCFDEDNSGIINEERLRELLTSMG-D-RFTDED 469 (542)
Q Consensus 430 ~~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g-~-~ls~~e 469 (542)
...++..+|..+-. ++.++.++|...|.... . ..+.+.
T Consensus 23 ~~~ei~~if~~~~~--~~~mt~~~l~~FL~~~Q~~~~~~~~~ 62 (581)
T PLN02222 23 APREIKTIFEKYSE--NGVMTVDHLHRFLIDVQKQDKATRED 62 (581)
T ss_pred CcHHHHHHHHHhcC--CCCcCHHHHHHHHHHhcCCccCCHHH
Confidence 35689999999863 47999999999998753 3 234444
No 400
>KOG3449|consensus
Probab=25.47 E-value=1.5e+02 Score=25.79 Aligned_cols=55 Identities=15% Similarity=0.239 Sum_probs=44.5
Q ss_pred HHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhcCCCCcchhhhHHHHh
Q psy15785 367 EAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGPINFTMFLTLFG 422 (542)
Q Consensus 367 ~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~~dG~Idf~EFl~~~~ 422 (542)
..|-+++.-++-..+..+++.+|...|.....+.+..++..-+|+ +.+|.++.=.
T Consensus 5 aAYLL~~lgGn~~psa~DikkIl~sVG~E~d~e~i~~visel~GK-~i~ElIA~G~ 59 (112)
T KOG3449|consen 5 AAYLLAVLGGNASPSASDIKKILESVGAEIDDERINLVLSELKGK-DIEELIAAGR 59 (112)
T ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHhCcccCHHHHHHHHHHhcCC-CHHHHHHHhH
Confidence 345566667777889999999999999999999999999987777 7777776543
No 401
>KOG0667|consensus
Probab=25.26 E-value=35 Score=38.28 Aligned_cols=25 Identities=8% Similarity=-0.012 Sum_probs=20.6
Q ss_pred hhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 296 KMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 296 k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.+++++++.- |+|+.+||+|||+..
T Consensus 479 ~dflk~~L~~dP~~R~tp~qal~Hpfl~~ 507 (586)
T KOG0667|consen 479 IDFLKRCLEWDPAERITPAQALNHPFLTG 507 (586)
T ss_pred HHHHHHHhccCchhcCCHHHHhcCccccc
Confidence 5667766655 999999999999975
No 402
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=25.19 E-value=37 Score=33.33 Aligned_cols=29 Identities=3% Similarity=-0.072 Sum_probs=24.4
Q ss_pred ccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 290 SISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 290 eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.+++.+++++++++.. |++..+++.|||+
T Consensus 252 ~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 252 HADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred hcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 4577778888888765 9999999999996
No 403
>PF03672 UPF0154: Uncharacterised protein family (UPF0154); InterPro: IPR005359 The proteins in this entry are functionally uncharacterised.
Probab=25.00 E-value=99 Score=24.24 Aligned_cols=31 Identities=19% Similarity=0.500 Sum_probs=27.6
Q ss_pred CcceeHHHHHHHHHHcCCCCCHHHHHHHHhc
Q psy15785 377 DGFIDKEDLHDMLASLGKNPTDDYLEGMMGE 407 (542)
Q Consensus 377 dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~ 407 (542)
+--|+.+-++..+..+|..|++..+.++++.
T Consensus 29 NPpine~mir~M~~QMG~kpSekqi~Q~m~~ 59 (64)
T PF03672_consen 29 NPPINEKMIRAMMMQMGRKPSEKQIKQMMRS 59 (64)
T ss_pred CCCCCHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 4578999999999999999999999998764
No 404
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=24.72 E-value=70 Score=19.30 Aligned_cols=16 Identities=31% Similarity=0.395 Sum_probs=12.3
Q ss_pred CCCCCCcccHHHHHHH
Q psy15785 442 DEDNSGIINEERLREL 457 (542)
Q Consensus 442 D~d~~G~Is~eEL~~~ 457 (542)
|.|++|.|+.-++..+
T Consensus 1 DvN~DG~vna~D~~~l 16 (21)
T PF00404_consen 1 DVNGDGKVNAIDLALL 16 (21)
T ss_dssp -TTSSSSSSHHHHHHH
T ss_pred CCCCCCcCCHHHHHHH
Confidence 6789999998887654
No 405
>KOG0597|consensus
Probab=24.64 E-value=31 Score=38.53 Aligned_cols=63 Identities=13% Similarity=-0.002 Sum_probs=48.4
Q ss_pred hhhccccccCCCCCCccccc-c-ccccccccccc-ccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD-L-ENLYLQTCNYF-SISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~-l-e~ly~~~~~~~-eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
..+||-...|.||||.++-. + +.+-..-..|. .+|...+.|.+-++.+ |+|=.+.+.||+.+.
T Consensus 187 GcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~ 256 (808)
T KOG0597|consen 187 GCILYELYVGQPPFYARSITQLVKSILKDPVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKG 256 (808)
T ss_pred HHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhh
Confidence 56888889999999987753 2 44444444443 5888888888888888 999999999999865
No 406
>COG5069 SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
Probab=24.51 E-value=76 Score=34.57 Aligned_cols=98 Identities=19% Similarity=0.222 Sum_probs=66.3
Q ss_pred CCHHHHHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhcCCCC---cchhhhHHHHhhhcCCCCcHHH
Q psy15785 357 FDQAQIQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGEAPGP---INFTMFLTLFGDRLQGTDPEDV 433 (542)
Q Consensus 357 ls~~ei~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~~dG~---Idf~EFl~~~~~~~~~~~~~~~ 433 (542)
+..+.+.....+|..+-+.+...++..++..++..+|......+--..|.+.+|. +.|..|+..+.. .....+.
T Consensus 479 l~~q~l~~~t~~f~h~lkk~~~~lsdsd~~a~l~slgl~~dk~egi~~F~~~a~s~~gv~yl~v~~~i~s---el~D~d~ 555 (612)
T COG5069 479 LVWQVLRSNTALFNHVLKKDGCGLSDSDLCAWLGSLGLKGDKEEGIRSFGDPAGSVSGVFYLDVLKGIHS---ELVDYDL 555 (612)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhccccCCccceeeccCCccccccchHHHHHHHHhh---hhcChhh
Confidence 3445566667788877666667799999999999999877766666666665554 466666666554 3334667
Q ss_pred HHHHHhhhCCCCCCc---ccHHHHHHH
Q psy15785 434 IKNAFGCFDEDNSGI---INEERLREL 457 (542)
Q Consensus 434 l~~aF~~~D~d~~G~---Is~eEL~~~ 457 (542)
++.+|..||.=.+|. ||.+.++.+
T Consensus 556 v~~~~~~f~diad~rsl~is~~ilRs~ 582 (612)
T COG5069 556 VTRGFTEFDDIADARSLAISSKILRSL 582 (612)
T ss_pred hhhhHHHHHHhhhhhhhhccHHHHHHh
Confidence 888888886544444 555555444
No 407
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=24.37 E-value=37 Score=33.60 Aligned_cols=64 Identities=6% Similarity=0.003 Sum_probs=38.0
Q ss_pred hhhccccccCCCCCCccccc-----c-cccccc-cccccccchhhhhhhhHhhhc----ccch---hhhhhhhhhhhc
Q psy15785 258 SINLDSDLLDTPDFYWERDD-----L-ENLYLQ-TCNYFSISRRTKMISRIYICR----RVTT---SASRDEQSVCYS 321 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~-----l-e~ly~~-~~~~~eIs~r~k~L~r~~l~~----r~ta---~~~l~h~w~~~~ 321 (542)
.++++.++.|.+||.-.... . ..+... ...-..++..+++++++++.. |+|+ .++++|||++..
T Consensus 195 G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~ 272 (288)
T cd05583 195 GVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGI 272 (288)
T ss_pred HHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence 45567778899887532221 1 011111 111123567778888888776 8884 566999999663
No 408
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=23.76 E-value=72 Score=28.02 Aligned_cols=27 Identities=26% Similarity=0.621 Sum_probs=21.2
Q ss_pred HHHHHHHhCCC-CCCceeHHHHHHHHhc
Q psy15785 508 EVDEMYREAPI-KNGMFDYIEFTRILKH 534 (542)
Q Consensus 508 ~i~~l~~~~D~-~dG~Is~~EF~~~l~~ 534 (542)
|++.++.++.. ..|.+.|.||+.-+..
T Consensus 8 QFdrLW~e~Pvn~~GrLkY~eFL~kfs~ 35 (118)
T PF08976_consen 8 QFDRLWNEMPVNAKGRLKYQEFLSKFSS 35 (118)
T ss_dssp HHHHHHTTS-B-TTS-EEHHHHHHHT--
T ss_pred HhhhhhhhCcCCccCCEeHHHHHHHccc
Confidence 39999999999 9999999999987763
No 409
>KOG0670|consensus
Probab=23.66 E-value=97 Score=34.47 Aligned_cols=112 Identities=13% Similarity=0.137 Sum_probs=64.6
Q ss_pred Ccce-eeeeccCceEeeccchHHHHHHHHHHhhhhccchhhHhhhhcccccccccCcchHHHHHHhhhHHHHHhhhhccc
Q psy15785 185 EPRF-IYFFQEGSLVAWNVSDLEIENLLEFLKQFEIKPYEKAVVLNEKELMNYTYSPNIREVLQKTGQLFALRHSINLDS 263 (542)
Q Consensus 185 ~~~~-~~~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~e~~~~~~~~~~~~~~~~~G~l~~~r~~v~l~~ 263 (542)
.+|| +|=+.+|+|-|=.-++.+|..+.=.|+- ||. +++++ -|+..-.-...+++.
T Consensus 620 SvgctLYElYtGkIlFpG~TNN~MLrl~me~KG----k~p-------------------~KmlR-KgqF~dqHFD~d~nf 675 (752)
T KOG0670|consen 620 SVGCTLYELYTGKILFPGRTNNQMLRLFMELKG----KFP-------------------NKMLR-KGQFKDQHFDQDLNF 675 (752)
T ss_pred eeceeeEEeeccceecCCCCcHHHHHHHHHhcC----CCc-------------------HHHhh-hcchhhhhcccccce
Confidence 4555 7888999999999999999888777642 222 12222 244444444555555
Q ss_pred cccCCCCCCcccc-----------ccccccccc----ccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 264 DLLDTPDFYWERD-----------DLENLYLQT----CNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 264 ~Lld~P~f~w~~~-----------~le~ly~~~----~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
+-.+.-++....- .+++.-... ..-..+-...++|.-+|++- |+|..+||.||+|+.
T Consensus 676 ~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 676 LYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred EEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 4444433333221 122211111 12233444556776444433 999999999999853
No 410
>KOG0586|consensus
Probab=23.63 E-value=52 Score=36.81 Aligned_cols=63 Identities=13% Similarity=-0.029 Sum_probs=49.5
Q ss_pred hhhccccccCCCCCCccccc-c--cccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD-L--ENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSVCY 320 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~-l--e~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~~~ 320 (542)
.|+||.+++|.=||-+.+-. + .-+.-..+-.+-+|...++|+|++|.. |.+..+...|.|+..
T Consensus 242 gvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~ 311 (596)
T KOG0586|consen 242 GVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRND 311 (596)
T ss_pred hhhheeeeecccccCCcccccccchheeeeecccceeechhHHHHHHhhccCccccCCHHHhhhhcccch
Confidence 57889999999999988754 2 234444455567899999999888666 999999999999754
No 411
>KOG0998|consensus
Probab=23.50 E-value=34 Score=40.43 Aligned_cols=62 Identities=19% Similarity=0.377 Sum_probs=51.8
Q ss_pred HHHHHHHHhhhCCCCCCcccHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhHhhhhhcccccccchhHHHHHHHHHHHHHH
Q psy15785 431 EDVIKNAFGCFDEDNSGIINEERLRELLTSMGDRFTDEDVMNEKLNHCLELVDLLSSHLSDKHHIRLEWMIIVLIMIEVD 510 (542)
Q Consensus 431 ~~~l~~aF~~~D~d~~G~Is~eEL~~~L~~~g~~ls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv~~~~~~~i~ 510 (542)
...+..+|...|.+++|.|+..+....+...| ++... +.
T Consensus 282 ~~~~~~if~q~d~~~dG~I~s~~~~~~f~~~g--l~~~~---------------------------------------l~ 320 (847)
T KOG0998|consen 282 KQKYSKIFSQVDKDNDGSISSNEARNIFLPFG--LSKPR---------------------------------------LA 320 (847)
T ss_pred HHHHHHHHHhccccCCCcccccccccccccCC--CChhh---------------------------------------hh
Confidence 45567789999999999999999999987744 56666 77
Q ss_pred HHHHhCCC-CCCceeHHHHHHHHh
Q psy15785 511 EMYREAPI-KNGMFDYIEFTRILK 533 (542)
Q Consensus 511 ~l~~~~D~-~dG~Is~~EF~~~l~ 533 (542)
.++..+|. ++|.+++++|+-.|-
T Consensus 321 ~~w~l~d~~n~~~ls~~ef~~~~~ 344 (847)
T KOG0998|consen 321 HVWLLADTQNTGTLSKDEFALAMH 344 (847)
T ss_pred hhhhhcchhccCcccccccchhhh
Confidence 88999999 999999998876554
No 412
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=23.44 E-value=41 Score=32.25 Aligned_cols=59 Identities=15% Similarity=-0.015 Sum_probs=36.1
Q ss_pred hhhccccccCCCCCCccccc-c-----cccccccccccccchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 258 SINLDSDLLDTPDFYWERDD-L-----ENLYLQTCNYFSISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 258 ~v~l~~~Lld~P~f~w~~~~-l-----e~ly~~~~~~~eIs~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.+.++..+++.|||-..+.. + ...+-... ...+..++++++.++.. |+++.+++.||.+
T Consensus 188 G~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 188 GCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIP--PIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCc--hhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 34445567788887554432 1 11111111 14566778888777754 9999999999853
No 413
>KOG0696|consensus
Probab=22.65 E-value=36 Score=36.51 Aligned_cols=64 Identities=19% Similarity=0.240 Sum_probs=48.2
Q ss_pred hhhhccccccCCCCCCccccc--ccccccccccc-cccchhhhhhhhHhhhc----c-----cchhhhhhhhhhhh
Q psy15785 257 HSINLDSDLLDTPDFYWERDD--LENLYLQTCNY-FSISRRTKMISRIYICR----R-----VTTSASRDEQSVCY 320 (542)
Q Consensus 257 ~~v~l~~~Lld~P~f~w~~~~--le~ly~~~~~~-~eIs~r~k~L~r~~l~~----r-----~ta~~~l~h~w~~~ 320 (542)
..|.||-+|.|-|||-+++++ ...+-.....| ..+|.++..+.+-.+.+ | -...++..||+++.
T Consensus 536 ~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~ 611 (683)
T KOG0696|consen 536 FGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRR 611 (683)
T ss_pred HHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhh
Confidence 467889999999999999886 35555555555 45899999998887777 3 23467788998865
No 414
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=22.36 E-value=74 Score=25.29 Aligned_cols=27 Identities=26% Similarity=0.524 Sum_probs=22.1
Q ss_pred HHHHHHhccccCCCCcceeHHHHHHHHH
Q psy15785 363 QNFKEAFNMIDQNRDGFIDKEDLHDMLA 390 (542)
Q Consensus 363 ~~l~~~F~~~D~d~dG~Is~~EL~~~L~ 390 (542)
+++.+.|+.+ .++.++||..||+..|.
T Consensus 6 eqv~~aFr~l-A~~KpyVT~~dLr~~l~ 32 (69)
T PF08726_consen 6 EQVEEAFRAL-AGGKPYVTEEDLRRSLT 32 (69)
T ss_dssp HHHHHHHHHH-CTSSSCEEHHHHHHHS-
T ss_pred HHHHHHHHHH-HcCCCcccHHHHHHHcC
Confidence 4567888888 77889999999998863
No 415
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=21.52 E-value=47 Score=32.49 Aligned_cols=27 Identities=4% Similarity=0.047 Sum_probs=23.4
Q ss_pred chhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 292 SRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 292 s~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
++.+.+++++|+.. |+++.+++.|||+
T Consensus 257 ~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 257 DPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 67778888888876 9999999999996
No 416
>KOG2871|consensus
Probab=20.77 E-value=1e+02 Score=32.60 Aligned_cols=60 Identities=20% Similarity=0.330 Sum_probs=44.0
Q ss_pred HHHHHHHhccccCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHhc-----CCCCcchhhhHHHH
Q psy15785 362 IQNFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDDYLEGMMGE-----APGPINFTMFLTLF 421 (542)
Q Consensus 362 i~~l~~~F~~~D~d~dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~-----~dG~Idf~EFl~~~ 421 (542)
-.++++.|+.+|+.++|+|+..-+...+..++...++...-.+++. .-|.|-..+|+..+
T Consensus 308 s~q~rR~f~a~d~~d~nfis~s~~~~vm~~~N~~vse~a~v~l~~~~l~pE~~~iil~~d~lg~~ 372 (449)
T KOG2871|consen 308 SEQLRRNFHAYDPEDNNFISCSGLQIVMTALNRLVSEPAYVMLMRQPLDPESLGIILLEDFLGEF 372 (449)
T ss_pred CHHHHhhhhccCccCCCeeecHHHHHHHHHhcccccCHHHHHHhcCccChhhcceEEeccccccc
Confidence 3567899999999999999999999999988866776666666554 23444444454443
No 417
>KOG0665|consensus
Probab=20.54 E-value=46 Score=34.62 Aligned_cols=27 Identities=4% Similarity=0.042 Sum_probs=22.7
Q ss_pred hhhhhhhhHhhhc----ccchhhhhhhhhhh
Q psy15785 293 RRTKMISRIYICR----RVTTSASRDEQSVC 319 (542)
Q Consensus 293 ~r~k~L~r~~l~~----r~ta~~~l~h~w~~ 319 (542)
.-+++|.++||.. |++++++|.||+++
T Consensus 284 ~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 284 SLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred HHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 4468888777766 99999999999997
No 418
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=20.45 E-value=64 Score=25.71 Aligned_cols=26 Identities=23% Similarity=0.282 Sum_probs=16.9
Q ss_pred HHHHHHhCCC-CCCceeHHHHHHHHhc
Q psy15785 509 VDEMYREAPI-KNGMFDYIEFTRILKH 534 (542)
Q Consensus 509 i~~l~~~~D~-~dG~Is~~EF~~~l~~ 534 (542)
...+...++. ..++|+-+||++.|+.
T Consensus 27 ~~~l~~~Y~~~k~~kIsR~~fvr~lR~ 53 (70)
T PF12174_consen 27 MDLLQKHYEEFKKKKISREEFVRKLRQ 53 (70)
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 4455555555 6677777777777654
No 419
>COG4302 EutC Ethanolamine ammonia-lyase, small subunit [Amino acid transport and metabolism]
Probab=20.20 E-value=68 Score=31.89 Aligned_cols=36 Identities=19% Similarity=0.314 Sum_probs=31.3
Q ss_pred hcCCCcceeeeeccCceEeeccchHHHHHHHHHHhhhhccchhhHhhhhcccccccccCcchHHHHHHhhhHHHHHhhhh
Q psy15785 181 QVGKEPRFIYFFQEGSLVAWNVSDLEIENLLEFLKQFEIKPYEKAVVLNEKELMNYTYSPNIREVLQKTGQLFALRHSIN 260 (542)
Q Consensus 181 ~~~~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~e~~~~~~~~~~~~~~~~~G~l~~~r~~v~ 260 (542)
++|-.++-+||.+.|+| .+.-++|+++..+--++
T Consensus 191 ~~G~svgt~~fVk~gRV----------------------------------------------a~aD~IgE~LgAkvvii 224 (294)
T COG4302 191 AAGLSVGTPFFVKYGRV----------------------------------------------AVADQIGEILGAKVVII 224 (294)
T ss_pred hcCcccCChhheeecch----------------------------------------------hhHHHHHHHhCCcEEEE
Confidence 57888999999999997 77889999999998887
Q ss_pred cc
Q psy15785 261 LD 262 (542)
Q Consensus 261 l~ 262 (542)
|.
T Consensus 225 LI 226 (294)
T COG4302 225 LI 226 (294)
T ss_pred Ee
Confidence 73
No 420
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=20.15 E-value=50 Score=32.37 Aligned_cols=28 Identities=14% Similarity=0.018 Sum_probs=23.7
Q ss_pred cchhhhhhhhHhhhc----ccchhhhhhhhhh
Q psy15785 291 ISRRTKMISRIYICR----RVTTSASRDEQSV 318 (542)
Q Consensus 291 Is~r~k~L~r~~l~~----r~ta~~~l~h~w~ 318 (542)
.+.....++++++.. |+|+.+++.|||+
T Consensus 252 ~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 252 ASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred CCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 357788888888776 9999999999996
No 421
>PRK00523 hypothetical protein; Provisional
Probab=20.10 E-value=1.4e+02 Score=24.04 Aligned_cols=31 Identities=16% Similarity=0.414 Sum_probs=27.6
Q ss_pred CcceeHHHHHHHHHHcCCCCCHHHHHHHHhc
Q psy15785 377 DGFIDKEDLHDMLASLGKNPTDDYLEGMMGE 407 (542)
Q Consensus 377 dG~Is~~EL~~~L~~lg~~~s~~ei~~l~~~ 407 (542)
+--|+.+-++..+.++|..||+..++++++.
T Consensus 37 NPpine~mir~M~~QMGqKPSekki~Q~m~~ 67 (72)
T PRK00523 37 NPPITENMIRAMYMQMGRKPSESQIKQVMRS 67 (72)
T ss_pred CcCCCHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 5578999999999999999999999998764
Done!