Diaphorina citri psyllid: psy15786

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300------
MDLLTSKGEFKNPFRIHLYLESRTDLEYAVHKIRYRIKTLEDELEEAEDGSYLAEFLISKGYEVHGIIRRSSSFNTGRIQHLYSNPASHVEGSMKLHYGDMTDSSCLVQIISSVQPREVYNLAAQSHVKVSFDMSEYTAEVDAVGTLRLLDAIKTCKFHHQVKFYQASTSELYGKVVETPQTETTPFYPRSPYACAKLYAYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGLMEYVQLGNLDSKRDWGHAKDYVEVSSFERIEWRDFVHTYRLYRDIGHISVTKLQKYTQ
cccccccccccccEEEEEEEEccccHHHHHHHcccccEEEEEECcccccHHHHHHHHHHcccEEEEEEEccccccccccHHccccccccccccEEEEEcccccHHHHHHHHHHccccccccccccccccccccccEEEEEccHHHHHHHHHHHHHccccccccEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccEEEccccccccccccccccHHHHHHHHHHHHHcccccEEEEcccccccccccHHHHHHHHHccccccccEEEEHHHHHHHHHHHccccccccc
**********KNPFRIHLYLESRTDLEYAVHKIRYRIKTLEDELEEAEDGSYLAEFLISKGYEVHGIIRRSSSFNTGRIQHLYSNPASHVEGSMKLHYGDMTDSSCLVQIISSVQPREVYNLAAQSHVKVSFDMSEYTAEVDAVGTLRLLDAIKTCKFHHQVKFYQASTSELYGKVVETPQTETTPFYPRSPYACAKLYAYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGLMEYVQLGNLDSKRDWGHAKDYVEVSSFERIEWRDFVHTYRLYRDIGHISVTKLQKYT*
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MDLLTSKGEFKNPFRIHLYLESRTDLEYAxxxxxxxxxxxxxxxxxxxxxSYLAEFLISKGYEVHGIIRRSSSFNTGRIQHLYSNPASHVEGSMKLHYGDMTDSSCLVQIISSVQPREVYNLAAQSHVKVSFDMSEYTAEVDAVGTLRLLDAIKTCKFHHQVKFYQASTSELYGKVVETPQTETTPFYPRSPYACAKLYAYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGLMEYVQLGNLDSKRDWGHAKDYVEVSSFERIEWRDFVHTYRLYRDIGHISVTKLQKYTQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
GDP-mannose 4,6 dehydratase Conversion of GDP-D-mannose to GDP-4-keto-6-D-deoxymannose.very confidentQ8K0C9
GDP-mannose 4,6 dehydratase Conversion of GDP-D-mannose to GDP-4-keto-6-D-deoxymannose.very confidentQ8K3X3
GDP-mannose 4,6 dehydratase Conversion of GDP-D-mannose to GDP-4-keto-6-D-deoxymannose.very confidentO60547

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0070401 [MF]NADP+ bindingconfidentGO:0043168, GO:0050662, GO:0050661, GO:0097159, GO:0000166, GO:0036094, GO:0048037, GO:0005488, GO:0003674, GO:0043167, GO:1901363, GO:1901265
GO:0042350 [BP]GDP-L-fucose biosynthetic processconfidentGO:0046368, GO:0044249, GO:0034641, GO:0009165, GO:0044281, GO:1901362, GO:1901360, GO:1901576, GO:0044710, GO:0008150, GO:0071704, GO:0018130, GO:0009987, GO:0006139, GO:0009225, GO:0009226, GO:0006725, GO:0009058, GO:0009117, GO:0008152, GO:0034654, GO:0090407, GO:0055086, GO:0046483, GO:0044238, GO:0044271, GO:1901137, GO:1901135, GO:0044237, GO:0006796, GO:0006807, GO:1901293, GO:0006793, GO:0019637, GO:0019438, GO:0006753
GO:0008446 [MF]GDP-mannose 4,6-dehydratase activityconfidentGO:0016835, GO:0016836, GO:0003674, GO:0016829, GO:0003824
GO:0008417 [MF]fucosyltransferase activityprobableGO:0016758, GO:0016740, GO:0003674, GO:0016757, GO:0003824
GO:0042351 [BP]'de novo' GDP-L-fucose biosynthetic processprobableGO:0046368, GO:0044249, GO:0034641, GO:0009165, GO:0044281, GO:1901362, GO:1901360, GO:1901576, GO:0044710, GO:0042350, GO:0008150, GO:0071704, GO:0018130, GO:0009987, GO:0006139, GO:0009225, GO:0009226, GO:0006725, GO:0009058, GO:0009117, GO:0008152, GO:0034654, GO:0090407, GO:0055086, GO:0046483, GO:0044238, GO:0044271, GO:1901137, GO:1901135, GO:0044237, GO:0006796, GO:0006807, GO:1901293, GO:0006793, GO:0019637, GO:0019438, GO:0006753
GO:0036065 [BP]fucosylationprobableGO:0044238, GO:0005975, GO:0070085, GO:0071704, GO:0008150, GO:0008152, GO:0044723
GO:0019673 [BP]GDP-mannose metabolic processprobableGO:0034641, GO:0006807, GO:0044281, GO:1901360, GO:0006139, GO:0044710, GO:0071704, GO:0009225, GO:0009987, GO:0006725, GO:0009117, GO:0008152, GO:0055086, GO:0046483, GO:0044238, GO:1901135, GO:0044237, GO:0006796, GO:0006793, GO:0019637, GO:0008150, GO:0006753
GO:0055120 [CC]striated muscle dense bodyprobableGO:0005737, GO:0043232, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044424, GO:0044444, GO:0043228, GO:0043292, GO:0043226, GO:0044422, GO:0044449
GO:0005783 [CC]endoplasmic reticulumprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0007219 [BP]Notch signaling pathwayprobableGO:0044700, GO:0051716, GO:0008150, GO:0050896, GO:0009987, GO:0050794, GO:0023052, GO:0065007, GO:0044763, GO:0007165, GO:0007166, GO:0007154, GO:0050789, GO:0044699
GO:0010842 [BP]retina layer formationprobableGO:0032502, GO:0032501, GO:0044699, GO:0048856, GO:0044707, GO:0007423, GO:0001654, GO:0048592, GO:0048593, GO:0009887, GO:0044767, GO:0048513, GO:0003407, GO:0060041, GO:0060042, GO:0048731, GO:0008150, GO:0009653, GO:0043010, GO:0007275, GO:0048646
GO:0021564 [BP]vagus nerve developmentprobableGO:0032502, GO:0044767, GO:0032501, GO:0044707, GO:0007399, GO:0021783, GO:0048856, GO:0021675, GO:0048486, GO:0008150, GO:0048483, GO:0021545, GO:0048731, GO:0007275, GO:0044699, GO:0007417
GO:0021744 [BP]dorsal motor nucleus of vagus nerve developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0007420, GO:0007399, GO:0048857, GO:0048856, GO:0044767, GO:0021550, GO:0048513, GO:0008150, GO:0030902, GO:0048731, GO:0007275, GO:0044699, GO:0007417
GO:0030017 [CC]sarcomereprobableGO:0005737, GO:0005575, GO:0043232, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0030016, GO:0044424, GO:0044444, GO:0043228, GO:0043292, GO:0043226, GO:0044422, GO:0044449
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0010171 [BP]body morphogenesisprobableGO:0032502, GO:0048856, GO:0044767, GO:0008150, GO:0009653, GO:0044699
GO:0040011 [BP]locomotionprobableGO:0008150
GO:0071688 [BP]striated muscle myosin thick filament assemblyprobableGO:0031034, GO:0031033, GO:0031032, GO:0070271, GO:0043933, GO:0051146, GO:0048468, GO:0030036, GO:0010927, GO:0022607, GO:0034622, GO:0061061, GO:0009653, GO:0044699, GO:0071822, GO:0048869, GO:0016043, GO:0032989, GO:0065003, GO:0071840, GO:0048646, GO:0032502, GO:0055001, GO:0055002, GO:0030154, GO:0030029, GO:0030239, GO:0006461, GO:0044767, GO:0008150, GO:0070925, GO:0043623, GO:0006996, GO:0007010, GO:0048856, GO:0044085, GO:0044763, GO:0009987, GO:0042692
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0045226 [BP]extracellular polysaccharide biosynthetic processprobableGO:0044249, GO:0034645, GO:0033692, GO:1901576, GO:0044264, GO:0044262, GO:0044260, GO:0016051, GO:0071704, GO:0046379, GO:0009987, GO:0000271, GO:0034637, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0044723, GO:0044238, GO:0005975, GO:0005976, GO:0044237, GO:0043170
GO:0002119 [BP]nematode larval developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0009791, GO:0002164, GO:0008150, GO:0007275, GO:0044699
GO:0017085 [BP]response to insecticideprobableGO:0008150, GO:0042221, GO:0050896, GO:0009636
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0009103 [BP]lipopolysaccharide biosynthetic processprobableGO:0044249, GO:0034645, GO:0016051, GO:1901576, GO:0044264, GO:0044262, GO:0044260, GO:0071704, GO:0043170, GO:0006629, GO:0009987, GO:0000271, GO:0044710, GO:0034637, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0044723, GO:0044255, GO:0008610, GO:0008653, GO:0044238, GO:0005975, GO:0005976, GO:1901137, GO:1901135, GO:0044237, GO:0033692
GO:2000035 [BP]regulation of stem cell divisionprobableGO:0050789, GO:0008150, GO:0065007, GO:0051302, GO:0050794
GO:0075015 [BP]formation of infection structure on or near hostprobableGO:0032502, GO:0048856, GO:0044419, GO:0044111, GO:0008150, GO:0044115, GO:0044403, GO:0009653, GO:0048646, GO:0051704
GO:0018991 [BP]ovipositionprobableGO:0032501, GO:0048609, GO:0032504, GO:0019098, GO:0050896, GO:0044706, GO:0007610, GO:0022414, GO:0008150, GO:0033057, GO:0000003, GO:0051704
GO:0016616 [MF]oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorprobableGO:0003824, GO:0003674, GO:0016614, GO:0016491
GO:0071456 [BP]cellular response to hypoxiaprobableGO:0009628, GO:0051716, GO:0070887, GO:0036293, GO:0050896, GO:0009987, GO:0071453, GO:0036294, GO:0008150, GO:0006950, GO:0044763, GO:0033554, GO:0042221, GO:0001666, GO:0044699, GO:0070482
GO:0040007 [BP]growthprobableGO:0008150

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
4.-.-.-Lyases.probable
4.2.-.-Carbon-oxygen lyases.probable
4.2.1.-Hydro-lyases.probable
4.2.1.47GDP-mannose 4,6-dehydratase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1T2A, chain A
Confidence level:very confident
Coverage over the Query: 41-305
View the alignment between query and template
View the model in PyMOL