BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1579
(258 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P28019|DYR_AEDAL Dihydrofolate reductase OS=Aedes albopictus GN=DHFR PE=3 SV=1
Length = 186
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 111/197 (56%), Gaps = 41/197 (20%)
Query: 24 RKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTG 83
R+++ +FSR+TKK ++S + NA+IMGRKT+ +PE RPLP R N++LTR D +
Sbjct: 27 RQELKYFSRMTKKIQDSGKRNAIIMGRKTYFGVPESKRPLPERLNIILTR--DPSANAYP 84
Query: 84 PNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLC 143
V +S+ +A+ L EIENVW++GG+++YK
Sbjct: 85 SEVMVCTSMQEALKKLDEAPLVNEIENVWIVGGNAVYK---------------------- 122
Query: 144 TRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLSDKFQLIK-DPNIPD 202
E++ S C ++Y+T+I F+CD FFP ++ FQL+K D ++P+
Sbjct: 123 ----------------EAMQSDRCHRIYLTEIKETFECDAFFPEITSDFQLVKNDDDVPE 166
Query: 203 DVQKENDLNFQFKVFQK 219
D+Q+EN + +Q+++++K
Sbjct: 167 DIQEENGIQYQYRIYEK 183
>sp|Q9U8B8|DYR_HELVI Dihydrofolate reductase OS=Heliothis virescens GN=DHFR PE=1 SV=1
Length = 185
Score = 130 bits (328), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 106/197 (53%), Gaps = 42/197 (21%)
Query: 24 RKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTG 83
+K+MA+F+ +T K +VNAVIMGR+TWD IP+K+RPL R N+VLT N D +
Sbjct: 29 KKEMAYFTTMTSKVSEPTKVNAVIMGRRTWDCIPDKYRPLQDRVNIVLTHNVDSVKENVP 88
Query: 84 PNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLC 143
V LD+AI ++ + + +IE+ WVIGGSSIY+
Sbjct: 89 EGVMVFPGLDEAI---KYIEGREDIESTWVIGGSSIYR---------------------- 123
Query: 144 TRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLS-DKFQLIKDPNIPD 202
++ P C K+Y+T+I FDCDTFFP++ +F L+ + IP
Sbjct: 124 ----------------AAMTHPNCGKIYLTEIQKSFDCDTFFPNIDKQQFHLVDEEQIPG 167
Query: 203 DVQKENDLNFQFKVFQK 219
+ Q E ++++ F+V++K
Sbjct: 168 EKQVEGNISYYFRVYKK 184
>sp|P17719|DYR_DROME Dihydrofolate reductase OS=Drosophila melanogaster GN=Dhfr PE=1
SV=3
Length = 182
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 50/200 (25%)
Query: 24 RKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLT---RNSDLGSQ 80
+ ++ +FSR TK+T + + NAV+MGRKT+ +PE RPLP R N+VL+ + SDL
Sbjct: 27 KSELKYFSRTTKRTSDPTKQNAVVMGRKTYFGVPESKRPLPDRLNIVLSTTLQESDLPK- 85
Query: 81 LTGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLI 140
V +L+ A+ +L + + E+EN+W++GGS +Y
Sbjct: 86 ----GVLLCPNLETAMKIL---EEQNEVENIWIVGGSGVY-------------------- 118
Query: 141 LLCTRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLSDKF-QLIKDPN 199
+E++ SP C ++Y+T+I FDCDTFFP++ D F ++ D +
Sbjct: 119 ------------------EEAMASPRCHRLYITKIMQKFDCDTFFPAIPDSFREVAPDSD 160
Query: 200 IPDDVQKENDLNFQFKVFQK 219
+P VQ+EN + F++K+ +K
Sbjct: 161 MPLGVQEENGIKFEYKILEK 180
>sp|P00378|DYR_CHICK Dihydrofolate reductase OS=Gallus gallus GN=DHFR PE=1 SV=1
Length = 189
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 106/200 (53%), Gaps = 43/200 (21%)
Query: 24 RKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTG 83
R + +F R+T + + NAVIMG+KTW SIPEK RPL R N+VL+R +L G
Sbjct: 28 RNEYKYFQRMTSTSHVEGKQNAVIMGKKTWFSIPEKNRPLKDRINIVLSR--ELKEAPKG 85
Query: 84 PNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLC 143
+ + SLD A+ LL + K +++ VW++GG+++YK
Sbjct: 86 AHY-LSKSLDDALALLDSPELKSKVDMVWIVGGTAVYK---------------------- 122
Query: 144 TRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLSDK-FQLIKD-PNIP 201
++ P +++VT+I H F+ DTFFP + K F+L+ + P +P
Sbjct: 123 ----------------AAMEKPINHRLFVTRILHEFESDTFFPEIDYKDFKLLTEYPGVP 166
Query: 202 DDVQKENDLNFQFKVFQKEL 221
D+Q+E+ + ++F+V+QK +
Sbjct: 167 ADIQEEDGIQYKFEVYQKSV 186
>sp|Q05762|DRTS1_ARATH Bifunctional dihydrofolate reductase-thymidylate synthase 1
OS=Arabidopsis thaliana GN=THY-1 PE=2 SV=2
Length = 519
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 92/194 (47%), Gaps = 42/194 (21%)
Query: 26 DMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGPN 85
D+ F IT T +S++ NAV+MGRKTW+SIP K+RPL GR NVVLTR+ T N
Sbjct: 47 DLKFFKDITLTTSDSSKKNAVVMGRKTWESIPIKYRPLSGRLNVVLTRSGGFDIANT-EN 105
Query: 86 VTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTR 145
V T SS+D A+DLL IE V+VIGG I
Sbjct: 106 VVTCSSVDSALDLLAAPPYCLSIERVFVIGGGDI-------------------------- 139
Query: 146 KSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLSDKFQLIKDPNIPDDVQ 205
L+E+LN P CD +++T+I DCDTF P++ + P
Sbjct: 140 ------------LREALNRPSCDAIHLTEIDTSVDCDTFIPAIDTSVYQPWSSSFP---V 184
Query: 206 KENDLNFQFKVFQK 219
EN L F F F +
Sbjct: 185 TENGLRFCFTTFVR 198
>sp|Q05763|DRTS2_ARATH Bifunctional dihydrofolate reductase-thymidylate synthase 2
OS=Arabidopsis thaliana GN=THY-2 PE=2 SV=2
Length = 565
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 84/163 (51%), Gaps = 39/163 (23%)
Query: 26 DMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGPN 85
D+ F +T T +S + NAV+MGRKTW+SIP+K+RPL GR NVVL+R+S T N
Sbjct: 91 DLKFFKDLTLSTSDSAKKNAVVMGRKTWESIPKKYRPLSGRLNVVLSRSSGFDIANT-EN 149
Query: 86 VTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTR 145
V T SS+D A+DLL IE V+VIGG I
Sbjct: 150 VVTCSSIDSALDLLAAPPFSLSIEKVFVIGGGDI-------------------------- 183
Query: 146 KSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSL 188
L+E+LN P C+ +++T+I DCDTF P++
Sbjct: 184 ------------LREALNKPSCEAIHITEIDTSIDCDTFIPTV 214
>sp|P09503|DYR_SHV21 Viral dihydrofolate reductase OS=Saimiriine herpesvirus 2 (strain
11) GN=DHFR PE=3 SV=1
Length = 187
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 103/197 (52%), Gaps = 45/197 (22%)
Query: 26 DMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGPN 85
D HF R+T + ++ N VIMG+KTW SIPEK RPL GR NVVL++ +L
Sbjct: 31 DFKHFQRMTTTSSVPDKQNLVIMGKKTWFSIPEKNRPLKGRINVVLSKEL---KELPHRA 87
Query: 86 VTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTR 145
SLD A+ L + +++ VW+IGGSS+YK
Sbjct: 88 HFLAKSLDDALKLTEQPELANKVDMVWIIGGSSVYK------------------------ 123
Query: 146 KSNASFMFSVLSLQESLNSPYCD-KVYVTQIHHHFDCDTFFPSLS-DKFQ-LIKDPNIPD 202
E+++ P CD K++VT+I F+CDTFFP +K++ LI+ P++
Sbjct: 124 --------------EAMSYP-CDLKLFVTRIMQDFECDTFFPEFDLEKYKLLIEYPSVLS 168
Query: 203 DVQKENDLNFQFKVFQK 219
+VQ+E + ++F+V++K
Sbjct: 169 NVQEEKSIKYKFEVYEK 185
>sp|P00376|DYR_BOVIN Dihydrofolate reductase OS=Bos taurus GN=DHFR PE=1 SV=3
Length = 187
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 103/198 (52%), Gaps = 43/198 (21%)
Query: 24 RKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTG 83
R + +F R+T + + N VIMGRKTW SIPEK RPL R N+VL+R +L G
Sbjct: 29 RNEFQYFQRMTTVSSVEGKQNLVIMGRKTWFSIPEKNRPLKDRINIVLSR--ELKEPPKG 86
Query: 84 PNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLC 143
+ SLD A++L+ + +++ VW++GGSS+YK
Sbjct: 87 AHF-LAKSLDDALELIEDPELTNKVDVVWIVGGSSVYK---------------------- 123
Query: 144 TRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLS-DKFQLIKD-PNIP 201
E++N P +++VT+I F+ D FFP + +K++L+ + P +P
Sbjct: 124 ----------------EAMNKPGHVRLFVTRIMQEFESDAFFPEIDFEKYKLLPEYPGVP 167
Query: 202 DDVQKENDLNFQFKVFQK 219
DVQ+E + ++F+V++K
Sbjct: 168 LDVQEEKGIKYKFEVYEK 185
>sp|P00377|DYR_PIG Dihydrofolate reductase OS=Sus scrofa GN=DHFR PE=1 SV=1
Length = 186
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 43/198 (21%)
Query: 24 RKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTG 83
R + +F R+T + + N VIMGRKTW SIPEK RPL R N+VL+R +L G
Sbjct: 28 RNEYKYFQRMTTTSSVEGKQNLVIMGRKTWFSIPEKNRPLKDRINIVLSR--ELKEPPQG 85
Query: 84 PNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLC 143
+ SLD A+ L + K +++ VW++GGSS+YK
Sbjct: 86 AHF-LAKSLDDALKLTEQPELKDKVDMVWIVGGSSVYK---------------------- 122
Query: 144 TRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLS-DKFQLIKD-PNIP 201
E++N P +++VT+I F+ DTFFP + +K++L+ + +P
Sbjct: 123 ----------------EAMNKPGHIRLFVTRIMKEFESDTFFPEIDLEKYKLLSECSGVP 166
Query: 202 DDVQKENDLNFQFKVFQK 219
DVQ+E + ++F+V++K
Sbjct: 167 SDVQEEKGIKYKFEVYEK 184
>sp|Q920D2|DYR_RAT Dihydrofolate reductase OS=Rattus norvegicus GN=Dhfr PE=2 SV=3
Length = 187
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 43/199 (21%)
Query: 24 RKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTG 83
R + +F R+T + + N VIMGRKTW SIPEK RPL R N+VL+R +L G
Sbjct: 29 RNEFKYFQRMTTTSSVEGKQNLVIMGRKTWFSIPEKNRPLKDRINIVLSR--ELKEPPQG 86
Query: 84 PNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLC 143
+ SLD A+ L+ + +++ VWV+GGSS+Y
Sbjct: 87 AHF-LAKSLDDALKLIEQPELASKVDMVWVVGGSSVY----------------------- 122
Query: 144 TRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLS-DKFQLIKD-PNIP 201
QE++N P +++VT+I F+ DTFFP + +K++L+ + P +
Sbjct: 123 ---------------QEAMNQPGHLRLFVTRIMQEFESDTFFPEIDLEKYKLLPEYPGVL 167
Query: 202 DDVQKENDLNFQFKVFQKE 220
++Q+E + ++F+V++K+
Sbjct: 168 SEIQEEKGIKYKFEVYEKK 186
>sp|P00374|DYR_HUMAN Dihydrofolate reductase OS=Homo sapiens GN=DHFR PE=1 SV=2
Length = 187
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 43/198 (21%)
Query: 24 RKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTG 83
R + +F R+T + + N VIMG+KTW SIPEK RPL GR N+VL+R +L G
Sbjct: 29 RNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSR--ELKEPPQG 86
Query: 84 PNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLC 143
+ + SLD A+ L + +++ VW++GGSS+YK
Sbjct: 87 AHF-LSRSLDDALKLTEQPELANKVDMVWIVGGSSVYK---------------------- 123
Query: 144 TRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLS-DKFQLIKD-PNIP 201
E++N P K++VT+I F+ DTFFP + +K++L+ + P +
Sbjct: 124 ----------------EAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVL 167
Query: 202 DDVQKENDLNFQFKVFQK 219
DVQ+E + ++F+V++K
Sbjct: 168 SDVQEEKGIKYKFEVYEK 185
>sp|P45350|DRTS_DAUCA Bifunctional dihydrofolate reductase-thymidylate synthase OS=Daucus
carota PE=2 SV=1
Length = 528
Score = 104 bits (259), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 80/165 (48%), Gaps = 39/165 (23%)
Query: 26 DMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGPN 85
DM F +T T + + NAVIMGRKTW+SIP + RPLPGR NVVLTR+ T N
Sbjct: 49 DMKFFKDVTMTTSDPLKRNAVIMGRKTWESIPIQHRPLPGRLNVVLTRSGSF-DIATVEN 107
Query: 86 VTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTR 145
V S+ A++LL +E V+VIGG IY+
Sbjct: 108 VVICGSMISALELLAGSPYCVSVEKVFVIGGGQIYR------------------------ 143
Query: 146 KSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLSD 190
E+LN+P CD V++T+I H +CDTF P L +
Sbjct: 144 --------------EALNAPGCDAVHITEIEEHIECDTFIPLLDE 174
>sp|P04753|DYR_MESAU Dihydrofolate reductase OS=Mesocricetus auratus GN=DHFR PE=2 SV=4
Length = 187
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 43/199 (21%)
Query: 24 RKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTG 83
R + +F R+T + + N VIMGRKTW SIPEK RPL R N+VL+R +L G
Sbjct: 29 RNEFKYFQRMTTTSSVEGKQNLVIMGRKTWFSIPEKNRPLKDRINIVLSR--ELKEPPQG 86
Query: 84 PNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLC 143
+ SLD A+ L+ + +++ VW++GGSS+YK
Sbjct: 87 AHF-LAKSLDDALKLIEQPELADKVDMVWIVGGSSVYK---------------------- 123
Query: 144 TRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLS-DKFQLIKD-PNIP 201
E++N P +++VT+I F+ DTFFP + +K++L+ + P +
Sbjct: 124 ----------------EAMNQPGHLRLFVTRIMQEFESDTFFPEIDLEKYKLLPEYPGVL 167
Query: 202 DDVQKENDLNFQFKVFQKE 220
+VQ+E + ++F+V++K+
Sbjct: 168 SEVQEEKGIKYKFEVYEKK 186
>sp|P00375|DYR_MOUSE Dihydrofolate reductase OS=Mus musculus GN=Dhfr PE=1 SV=3
Length = 187
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 43/199 (21%)
Query: 24 RKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTG 83
R + +F R+T + + N VIMGRKTW SIPEK RPL R N+VL+R +L G
Sbjct: 29 RNEFKYFQRMTTTSSVEGKQNLVIMGRKTWFSIPEKNRPLKDRINIVLSR--ELKEPPRG 86
Query: 84 PNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLC 143
+ SLD A+ L+ + +++ VW++GGSS+Y
Sbjct: 87 AHF-LAKSLDDALRLIEQPELASKVDMVWIVGGSSVY----------------------- 122
Query: 144 TRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLS-DKFQLIKD-PNIP 201
QE++N P +++VT+I F+ DTFFP + K++L+ + P +
Sbjct: 123 ---------------QEAMNQPGHLRLFVTRIMQEFESDTFFPEIDLGKYKLLPEYPGVL 167
Query: 202 DDVQKENDLNFQFKVFQKE 220
+VQ+E + ++F+V++K+
Sbjct: 168 SEVQEEKGIKYKFEVYEKK 186
>sp|Q2QRX6|DRTS_ORYSJ Putative bifunctional dihydrofolate reductase-thymidylate synthase
OS=Oryza sativa subsp. japonica GN=Os12g0446900 PE=3
SV=2
Length = 494
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 78/163 (47%), Gaps = 39/163 (23%)
Query: 26 DMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGPN 85
D+ F IT T + ++ NAV+MGRKTW+SIP KFRPLPGR NV+LTR+ T N
Sbjct: 16 DLKFFKDITVTTSDPSKKNAVVMGRKTWESIPLKFRPLPGRLNVILTRSGSFDFA-TAEN 74
Query: 86 VTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTR 145
V SLD A+ LL +E ++IGG I
Sbjct: 75 VVICGSLDSALQLLATTPYCLTVEKTFIIGGGEI-------------------------- 108
Query: 146 KSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSL 188
L++SLN+P C+ +++T I +CDTF P +
Sbjct: 109 ------------LRQSLNAPACEAIHLTDIESSIECDTFIPPI 139
>sp|P51820|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Glycine max PE=1 SV=1
Length = 530
Score = 97.4 bits (241), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 89/192 (46%), Gaps = 42/192 (21%)
Query: 26 DMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGPN 85
D+ F IT KT + NA++MGRKTW+SIP ++RPL GR NVVLTR+ T N
Sbjct: 52 DLKFFKEITMKTSEPGKKNAIVMGRKTWESIPLEYRPLSGRLNVVLTRSGSF-DIATAEN 110
Query: 86 VTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTR 145
V S+ A++LL IE V+VIGG I++
Sbjct: 111 VVICGSMSSALELLAASPYSLSIEKVFVIGGGQIFR------------------------ 146
Query: 146 KSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLSDKFQLIKDPNIPDDVQ 205
E+LN P C+ +++T+I +CDTF P + F + + P +
Sbjct: 147 --------------EALNVPGCEAIHLTEIQSSIECDTFMPPVD--FTIFR-PWYSSFPK 189
Query: 206 KENDLNFQFKVF 217
EN++ + F +
Sbjct: 190 VENNIRYSFTTY 201
>sp|O81395|DRTS_MAIZE Bifunctional dihydrofolate reductase-thymidylate synthase OS=Zea
mays GN=DRTS PE=2 SV=1
Length = 521
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 39/163 (23%)
Query: 26 DMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGPN 85
D+ F +T T + + NAVIMGRKTW+SIP K RPLPGR NV+LTR+ T N
Sbjct: 43 DLKFFKELTLTTSDPVKKNAVIMGRKTWESIPVKSRPLPGRLNVILTRSGSF-DFATVEN 101
Query: 86 VTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTR 145
V S++ A++LL IE V+VIGG +
Sbjct: 102 VVICGSMESALELLASTPYCLSIEKVFVIGGGQV-------------------------- 135
Query: 146 KSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSL 188
L+E L P C+ +++T I +CDTF P +
Sbjct: 136 ------------LREYLKGPACEAIHLTDIQSSIECDTFIPPV 166
>sp|Q86XF0|DYRL1_HUMAN Dihydrofolate reductase, mitochondrial OS=Homo sapiens GN=DHFRL1
PE=1 SV=1
Length = 187
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 43/199 (21%)
Query: 24 RKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTG 83
R + +F R+T + + N VIMGRKTW SIPEK RPL R N+VL+R +L G
Sbjct: 29 RNEFRYFQRMTTTSSVEGKQNLVIMGRKTWFSIPEKNRPLKDRINLVLSR--ELKEPPQG 86
Query: 84 PNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLC 143
+ SLD A+ L + +++ +W++GGSS+YK
Sbjct: 87 AHF-LARSLDDALKLTERPELANKVDMIWIVGGSSVYK---------------------- 123
Query: 144 TRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLS-DKFQLIKD-PNIP 201
E++N K++VT+I F+ DTFF + +K++L+ + P +
Sbjct: 124 ----------------EAMNHLGHLKLFVTRIMQDFESDTFFSEIDLEKYKLLPEYPGVL 167
Query: 202 DDVQKENDLNFQFKVFQKE 220
DVQ+ + ++F+V +K+
Sbjct: 168 SDVQEGKHIKYKFEVCEKD 186
>sp|P22573|DYR_SHV2C Viral dihydrofolate reductase OS=Saimiriine herpesvirus 2 (strain
488) GN=DHFR PE=3 SV=1
Length = 213
Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 44/196 (22%)
Query: 26 DMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGPN 85
D +F R+T + N+ N VIMG+ TW SIPEK RPL R N+VL++ L G +
Sbjct: 31 DFKYFQRMTTSSV-KNKQNLVIMGKNTWFSIPEKNRPLKDRINLVLSKK--LKEIPHGAH 87
Query: 86 VTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTR 145
SL+ A+ L+ + +++ VW+IGGSS+YK
Sbjct: 88 F-LARSLNDALKLIEQPELVNKVDRVWIIGGSSVYK------------------------ 122
Query: 146 KSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLSDKFQ--LIKDPNIPDD 203
+++N K++VT+I F+ DTFFP + K LI+ P +P +
Sbjct: 123 --------------DAMNYSSHLKLFVTRIMQSFETDTFFPEIDLKNYKLLIEYPGVPSN 168
Query: 204 VQKENDLNFQFKVFQK 219
Q+E + ++F+V++K
Sbjct: 169 TQEEKGIKYKFEVYEK 184
>sp|P27421|DYR_SHV24 Viral dihydrofolate reductase OS=Saimiriine herpesvirus 2 (strain
484-77) GN=DHFR PE=3 SV=1
Length = 186
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 98/196 (50%), Gaps = 44/196 (22%)
Query: 26 DMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGPN 85
D +F R+T + N+ N VIMG+ TW SIPEK RPL R N+VL++ L G +
Sbjct: 31 DFKYFQRMTTSSV-KNKQNLVIMGKNTWFSIPEKNRPLKDRINLVLSKK--LKEIPHGAH 87
Query: 86 VTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTR 145
SL+ A+ L+ + +++ VW+IGGSS+YK
Sbjct: 88 F-LARSLNDALKLIEQPEFVNKVDMVWIIGGSSVYK------------------------ 122
Query: 146 KSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLS-DKFQ-LIKDPNIPDD 203
+++N K++VT+I F+ DTFFP + K++ LI+ P +P +
Sbjct: 123 --------------DAMNYSSHLKLFVTRIMQSFETDTFFPEIDLKKYKPLIEYPGVPSN 168
Query: 204 VQKENDLNFQFKVFQK 219
Q+E + ++F+V++K
Sbjct: 169 TQEEKGIRYKFEVYEK 184
>sp|P22906|DYR_CANAX Dihydrofolate reductase OS=Candida albicans GN=DFR1 PE=1 SV=4
Length = 192
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 74/119 (62%), Gaps = 8/119 (6%)
Query: 2 LMITVFLKVQGFFFEACQIFYTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFR 61
+++ G ++ + RK++ +F +T +T N NAVIMGRKTW+SIP+KFR
Sbjct: 8 IIVAALKPALGIGYKGKMPWRLRKEIRYFKDVTTRTTKPNTRNAVIMGRKTWESIPQKFR 67
Query: 62 PLPGRYNVVLTRNSDLGSQLTGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIY 120
PLP R N++L+R+ + +++ N+ SS++ +++L+ ++E V++IGG+ IY
Sbjct: 68 PLPDRLNIILSRSYE--NKIIDDNIIHASSIESSLNLV------SDVERVFIIGGAEIY 118
>sp|Q93341|DYR_CAEEL Putative dihydrofolate reductase OS=Caenorhabditis elegans
GN=dhfr-1 PE=3 SV=1
Length = 189
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 45/198 (22%)
Query: 21 FYTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQ 80
+ +KDM +F+ +TK + ++ NAV+MGRK W+SIP RPL GR N+VL+R L +Q
Sbjct: 24 WRIKKDMQYFASVTKNVSDQSKRNAVLMGRKCWESIPVTRRPLAGRLNIVLSRQ--LPAQ 81
Query: 81 LTGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLI 140
+ +SL+ A+ LL IE +W IGG+ IY
Sbjct: 82 -KSDDYIVVNSLEAAMKLLSEPPFVDSIETIWNIGGAEIYD------------------- 121
Query: 141 LLCTRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLS-DKFQLIKDPN 199
L+L+E+L D++++T+I +F+ D SL K + +++
Sbjct: 122 ---------------LALRENL----VDEIHLTRIFKNFEADVHLKSLDFSKMEKVQNAE 162
Query: 200 IP---DDVQKENDLNFQF 214
+ ++ +EN L F+F
Sbjct: 163 VSSENSEIFEENGLKFEF 180
>sp|P16184|DYR_PNECA Dihydrofolate reductase OS=Pneumocystis carinii PE=1 SV=1
Length = 206
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 47/169 (27%)
Query: 24 RKDMAHFSRITK---KTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQ 80
+K++++F R+T ++ +N V+MGRKTW+SIP +FRPL GR NVV+TRN L
Sbjct: 30 KKEISYFKRVTSFVPTFDSFESMNVVLMGRKTWESIPLQFRPLKGRINVVITRNESLD-- 87
Query: 81 LTGPNVTTTSSLDQAIDLLRH---KKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKK 137
G + + SLD A++LL +S +I ++VIGG+ +YK
Sbjct: 88 -LGNGIHSAKSLDHALELLYRTYGSESSVQINRIFVIGGAQLYK---------------- 130
Query: 138 GLILLCTRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFP 186
+++ P D++ T I+ CD FFP
Sbjct: 131 ----------------------AAMDHPKLDRIMATIIYKDIHCDVFFP 157
>sp|Q27783|DRTS_TRYBB Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Trypanosoma brucei brucei PE=1 SV=1
Length = 527
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 67/129 (51%), Gaps = 20/129 (15%)
Query: 25 KDMAHFSRITKKTENSN------RVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLG 78
+DM +F R+T N + NAV+MGRKTWDS+P KFRPL R NVVL+R++
Sbjct: 53 EDMQYFRRVTTNLRGKNVKPSPSKRNAVVMGRKTWDSLPPKFRPLSNRLNVVLSRSATKE 112
Query: 79 SQLTG-PN-----------VTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYK--LTE 124
L G P+ V L+ A+ +L K+ IE V+ IGG +IYK L
Sbjct: 113 QLLAGIPDPIKRAEAANDVVAVNGGLEDALRMLVSKEHTSSIETVFCIGGGTIYKQALCA 172
Query: 125 PLMNRLSTF 133
P +N L
Sbjct: 173 PCVNVLQAI 181
>sp|Q27793|DRTS_TRYCR Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Trypanosoma cruzi PE=1 SV=2
Length = 521
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 58/114 (50%), Gaps = 18/114 (15%)
Query: 25 KDMAHFSRITKKTENSN------RVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLG 78
+DM F +T K N + NAV+MGRKTWDSIP KFRPLPGR NVVL+
Sbjct: 47 EDMKFFRDLTTKLRGKNVKPSPAKRNAVVMGRKTWDSIPPKFRPLPGRLNVVLSSTLTTQ 106
Query: 79 SQLTG-PN-----------VTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIY 120
L G P+ V L+QA+ LL IE V+ IGG S+Y
Sbjct: 107 HLLDGLPDEEKRNLHADSIVAVNGGLEQALRLLASPNYTPSIETVYCIGGGSVY 160
>sp|P36591|DYR_SCHPO Dihydrofolate reductase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=dfr1 PE=2 SV=2
Length = 461
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 54/182 (29%)
Query: 21 FYTRKDMAHFSRITKKTENSNRV--------NAVIMGRKTWDSIPEKFRPLPGRYNVVLT 72
++ +++MA+F+ +T TE+S ++ N VIMGR +DS+P+K RPL R N+V+T
Sbjct: 255 WHIKQEMAYFANVTSSTESSGQLEEGKSKIMNVVIMGRSCYDSLPKKNRPLKDRINIVIT 314
Query: 73 RNSDLGSQLTG-----PNVTTTSSLDQAIDLLRHK---KSKGEIENVWVIGGSSIYKLTE 124
RNS+ LT N+ +D A+DL+ K S ++ V++IGGS +Y
Sbjct: 315 RNSNYNFGLTKKEKMPENLYAADCIDSALDLVAEKYGADSDIQVGKVFIIGGSFLYG--- 371
Query: 125 PLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTF 184
+L P + T+IH + CD+F
Sbjct: 372 -----------------------------------SALYHPLTKNLLFTRIHKEYPCDSF 396
Query: 185 FP 186
FP
Sbjct: 397 FP 398
>sp|P07807|DYR_YEAST Dihydrofolate reductase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=DFR1 PE=1 SV=2
Length = 211
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Query: 12 GFFFEACQIFYTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVL 71
G F + +M +F ++T T++ N+ NA+IMGRKTW+SIP KFRPLP R NV++
Sbjct: 20 GIGFRGGLPWRLPSEMKYFRQVTSLTKDPNKKNALIMGRKTWESIPPKFRPLPNRMNVII 79
Query: 72 TRN-SDLGSQLTGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIY 120
+R+ D ++ ++SL AI L K +E ++VIGG +Y
Sbjct: 80 SRSFKDDFVHDKERSIVQSNSLANAIMNL-ESNFKEHLERIYVIGGGEVY 128
>sp|Q07801|DYR_CRYNJ Dihydrofolate reductase OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=DFR1 PE=1
SV=1
Length = 229
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 26/164 (15%)
Query: 26 DMAHFSRITKK---TENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLT-RNSDLGSQL 81
+M +F+R+T + + + N VIMGRKTW+SIP +FRPL R NVV++ + DLG
Sbjct: 37 EMKYFARVTTGETPSSDPSEQNVVIMGRKTWESIPSRFRPLKNRRNVVISGKGVDLG--- 93
Query: 82 TGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLIL 141
T N T + + A+ LR G +++IGG+++Y + L+
Sbjct: 94 TAENSTVYTDIPSALSALRSTTESGHSPRIFLIGGATLYTSS---------------LLP 138
Query: 142 LCTRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFF 185
N+S S L P D++ +T+I F+CD +
Sbjct: 139 SSVPSLNSSTSTSPLPFSR----PLIDRILLTRILSPFECDAYL 178
>sp|P0A546|DYR_MYCTU Dihydrofolate reductase OS=Mycobacterium tuberculosis GN=folA PE=1
SV=1
Length = 159
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 38/154 (24%)
Query: 25 KDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDL---GSQL 81
+D AHF IT + ++MGR+TWDS+P K RPLPGR NVVL+R +D G+++
Sbjct: 26 EDQAHFREITMG-------HTIVMGRRTWDSLPAKVRPLPGRRNVVLSRQADFMASGAEV 78
Query: 82 TGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLST------FPK 135
G SL++A+ WVIGG +Y L P R P+
Sbjct: 79 VG-------SLEEALT----------SPETWVIGGGQVYALALPYATRCEVTEVDIGLPR 121
Query: 136 KKGLILL-----CTRKSNASFMFSVLSLQESLNS 164
+ G L R + FS L+ L S
Sbjct: 122 EAGDALAPVLDETWRGETGEWRFSRSGLRYRLYS 155
>sp|P0A547|DYR_MYCBO Dihydrofolate reductase OS=Mycobacterium bovis (strain ATCC BAA-935
/ AF2122/97) GN=folA PE=3 SV=1
Length = 159
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 38/154 (24%)
Query: 25 KDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDL---GSQL 81
+D AHF IT + ++MGR+TWDS+P K RPLPGR NVVL+R +D G+++
Sbjct: 26 EDQAHFREITMG-------HTIVMGRRTWDSLPAKVRPLPGRRNVVLSRQADFMASGAEV 78
Query: 82 TGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLST------FPK 135
G SL++A+ WVIGG +Y L P R P+
Sbjct: 79 VG-------SLEEALT----------SPETWVIGGGQVYALALPYATRCEVTEVDIGLPR 121
Query: 136 KKGLILL-----CTRKSNASFMFSVLSLQESLNS 164
+ G L R + FS L+ L S
Sbjct: 122 EAGDALAPVLDETWRGETGEWRFSRSGLRYRLYS 155
>sp|Q07422|DRTS_TOXGO Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Toxoplasma gondii PE=3 SV=1
Length = 610
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 81/196 (41%), Gaps = 72/196 (36%)
Query: 26 DMAHFSRITKKTEN--------------------------SNRVNAVIMGRKTWDSIPEK 59
D HFSR+TK T R NAV+MGRKTW+S+P K
Sbjct: 31 DFKHFSRVTKTTPEEASRLNGWLPRKFAKTGDSGLPSPSVGKRFNAVVMGRKTWESMPRK 90
Query: 60 FRPLPGRYNVVLT---RNSDLGS---QLTGPN-VTTTSSLDQAIDLLRHKKSKGEIENVW 112
FRPL R N+V++ + D+ + Q G V +SL A+ LL ++ K ++ ++
Sbjct: 91 FRPLVDRLNIVVSSSLKEEDIAAEKPQAEGQQRVRVCASLPAALSLL-EEEYKDSVDQIF 149
Query: 113 VIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQESLNSPYCDKVYV 172
V+GG+ +Y+ A+ V S +Y+
Sbjct: 150 VVGGAGLYE---------------------------AALSLGVAS-----------HLYI 171
Query: 173 TQIHHHFDCDTFFPSL 188
T++ F CD FFP+
Sbjct: 172 TRVAREFPCDVFFPAF 187
>sp|Q9CBW1|DYR_MYCLE Dihydrofolate reductase OS=Mycobacterium leprae (strain TN) GN=folA
PE=3 SV=1
Length = 165
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 17/105 (16%)
Query: 25 KDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGP 84
+D+ F ++T + V+MGR+TWDS+P RPLPGR N+VL+R D ++
Sbjct: 28 EDLTRFKQLTMG-------HPVVMGRRTWDSLPVGVRPLPGRRNIVLSRQIDFMAE---- 76
Query: 85 NVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNR 129
SL++ I L + +WVIGG IY+L PL R
Sbjct: 77 GAEVFGSLEETISNLETEP------EMWVIGGEQIYRLALPLATR 115
>sp|P16126|DRTS_LEIAM Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Leishmania amazonensis PE=3 SV=1
Length = 520
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 62/135 (45%), Gaps = 28/135 (20%)
Query: 25 KDMAHFSRIT-----KKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGS 79
+DMA F T KK + NAV+MGRKTW+S+P KFRPL GR NVVL+ + +
Sbjct: 51 EDMAFFKDQTTLLRNKKPPTDKKRNAVVMGRKTWESVPVKFRPLKGRLNVVLSSKATV-E 109
Query: 80 QLTGP------------NVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIY------- 120
+L P V L A+ LL IE + +GG+ +Y
Sbjct: 110 ELLAPLPEEKRAAAAQDIVVVNGGLAAAVRLLARPPYCSSIETAYCVGGAQVYADAMLSP 169
Query: 121 ---KLTEPLMNRLST 132
KL E + R+ T
Sbjct: 170 CVEKLQEVYLTRIHT 184
>sp|Q23695|DRTS_CRIFA Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Crithidia fasciculata PE=3 SV=1
Length = 515
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 58/120 (48%), Gaps = 21/120 (17%)
Query: 35 KKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRN---SDLGSQL-------TGP 84
KK + NAV+MGRKTW+ +P KFRPL GR NVVL+ DL +QL
Sbjct: 66 KKPPTEKKRNAVVMGRKTWE-VPLKFRPLKGRLNVVLSCRRPVDDLLAQLPEEKRAAAAA 124
Query: 85 NVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIY----------KLTEPLMNRLSTFP 134
+V L +A+ LL IE + IGG+ +Y KL E + R+ T P
Sbjct: 125 DVVINGGLKEALHLLARPPYCSSIETAYCIGGARVYTEAMQSPCVEKLKEVYLTRVHTAP 184
>sp|P13922|DRTS_PLAFK Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Plasmodium falciparum (isolate K1 / Thailand) PE=1
SV=2
Length = 608
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 49/177 (27%)
Query: 44 NAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGPNVTTTSSLDQAIDLLRHKK 103
N V+MGR W+SIP+KF+PL R NV+L+R L + +V + ++ I LL
Sbjct: 100 NVVVMGRTNWESIPKKFKPLSNRINVILSRT--LKKEDFDEDVYIINKVEDLIVLL---- 153
Query: 104 SKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQESLN 163
K ++IGGS +Y QE L
Sbjct: 154 GKLNYYKCFIIGGSVVY--------------------------------------QEFLE 175
Query: 164 SPYCDKVYVTQIHHHFDCDTFFPSLSD-KFQLIKDPNIPDDVQKENDLNFQFKVFQK 219
K+Y T+I+ ++CD FFP +++ ++Q+I DV N+ F +++K
Sbjct: 176 KKLIKKIYFTRINSTYECDVFFPEINENEYQIIS----VSDVYTSNNTTLDFIIYKK 228
>sp|P07382|DRTS_LEIMA Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Leishmania major GN=LmjF06.0860 PE=1 SV=1
Length = 520
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 20/125 (16%)
Query: 25 KDMAHFSRIT-----KKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGS 79
+DM F T KK + NAV+MGRKTW+S+P KFRPL GR N+VL+ + +
Sbjct: 51 EDMTFFKNQTTLLRNKKPPTEKKRNAVVMGRKTWESVPVKFRPLKGRLNIVLSSKATV-E 109
Query: 80 QLTGP------------NVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIY--KLTEP 125
+L P V L +A+ LL IE + +GG+ +Y + P
Sbjct: 110 ELLAPLPEGQRAAAAQDVVVVNGGLAEALRLLARPLYCSSIETAYCVGGAQVYADAMLSP 169
Query: 126 LMNRL 130
+ +L
Sbjct: 170 CIEKL 174
>sp|P20712|DRTS_PLACH Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Plasmodium chabaudi PE=3 SV=1
Length = 583
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 61/209 (29%)
Query: 44 NAVIMGRKTWDSIPEKFRPLPGRYNVVLTRN---SDLGSQLTGPNVTTTSSLDQAIDLLR 100
N V+MG+ +W+SIP KF+PL R N++L+R DL + NV +S+D +L+
Sbjct: 98 NIVVMGKASWESIPSKFKPLQNRINIILSRTLKKEDLAKEYN--NVIIINSVDDLFPILK 155
Query: 101 HKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQE 160
K ++IGG+S+YK E
Sbjct: 156 CIK----YYKCFIIGGASVYK--------------------------------------E 173
Query: 161 SLNSPYCDKVYVTQIHHHFDCDTFFPSLSDKFQLIKDPNIPDDVQKENDLNFQFKVFQK- 219
L+ K+Y T+I++ + CD FP +++ L K +I DV N+ F ++ K
Sbjct: 174 FLDRNLIKKIYFTRINNAYTCDVLFPDINE--DLFKITSIS-DVYSSNNTTLDFVIYSKT 230
Query: 220 -----ELAPKPHSLN-----VWNHKNYNF 238
E+ P N V + KN NF
Sbjct: 231 KEIHEEINPNDELFNNTFLGVCDEKNTNF 259
>sp|P11045|DYR_BACSU Dihydrofolate reductase OS=Bacillus subtilis (strain 168) GN=dfrA
PE=1 SV=2
Length = 168
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 63/200 (31%)
Query: 26 DMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGPN 85
D+A+F +IT +++IMGRKT++SI RPLP R N+V+T D S+ G
Sbjct: 27 DLAYFKKITSG-------HSIIMGRKTFESIG---RPLPNRKNIVVTSAPD--SEFQG-- 72
Query: 86 VTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTR 145
T SSL +D+ E +VIGG+ +Y FP
Sbjct: 73 CTVVSSLKDVLDICSGP------EECFVIGGAQLYT---------DLFP----------- 106
Query: 146 KSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLSDK-FQLIKDPNIPDDV 204
Y D++Y+T+IHH F+ D FP + ++L+ D
Sbjct: 107 --------------------YADRLYMTKIHHEFEGDRHFPEFDESNWKLVSSEQGTKD- 145
Query: 205 QKENDLNFQFKVFQKELAPK 224
++N +++F +++K+ + K
Sbjct: 146 -EKNPYDYEFLMYEKKNSSK 164
>sp|Q5UQG3|DRTS_MIMIV Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R497 PE=3
SV=1
Length = 563
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 10/112 (8%)
Query: 22 YTRKDMAHFSRITKKTEN-SNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQ 80
Y + DM HF +IT T + + VNA+I+G TW ++P +R + R+N+V++R+ + Q
Sbjct: 30 YLKDDMNHFRKITTDTGSIESGVNAIIVGFNTWQTLPSSYRNIRSRFNIVISRDDETDGQ 89
Query: 81 LTGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLT--EPLMNRL 130
+ D+AI+ S + ++VIGG IY L L+++L
Sbjct: 90 FH----KYVKTFDEAIEF---ASSLTNLNEIFVIGGGVIYDLALKHKLLDKL 134
>sp|Q27713|DRTS_PLABA Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Plasmodium berghei (strain Anka) PE=3 SV=1
Length = 587
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 50/196 (25%)
Query: 37 TENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTR-----NSDLGSQLTGPNVTTTSS 91
+ +N N V+MG+K+W+SIP+KF+PL R N++L+R + + NV S
Sbjct: 95 SSTNNLQNIVVMGKKSWESIPKKFKPLQNRINIILSRTLKKEDIVNENNNENNNVIIIKS 154
Query: 92 LDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASF 151
+D +L+ K ++IGGSS+YK
Sbjct: 155 VDDLFPILKCTK----YYKCFIIGGSSVYK------------------------------ 180
Query: 152 MFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLSDKFQLIKDPNIPDDVQKENDLN 211
E L+ K+Y T+I++ ++CD FP +++ L K +I DV N+
Sbjct: 181 --------EFLDRNLIKKIYFTRINNSYNCDVLFPEINE--NLFKITSIS-DVYYSNNTT 229
Query: 212 FQFKVFQKELAPKPHS 227
F ++ K P+
Sbjct: 230 LDFIIYSKTKEINPNE 245
>sp|Q54277|DYR_STAHA Dihydrofolate reductase OS=Staphylococcus haemolyticus GN=dfrD PE=1
SV=1
Length = 166
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 56/184 (30%)
Query: 37 TENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGPNVTTTSSLDQAI 96
+N+ + +A+I+GRK SI R LP R N++LTR+ + + + S++ A
Sbjct: 36 VKNTTKGHAIILGRKNLQSIG---RALPDRRNIILTRDKNFNFK----DCEIAHSIEAAF 88
Query: 97 DLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVL 156
L ++ E V++ GG IY V+
Sbjct: 89 KLCENE------EEVFIFGGEQIY----------------------------------VM 108
Query: 157 SLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLSDKFQLIKDPNIPDDVQKE-NDLNFQFK 215
L PY +K+YVT+IHH F+ DTFFP ++ F K+ ++ ++ E N ++ F
Sbjct: 109 FL------PYVEKMYVTKIHHEFEGDTFFPVVN--FDDWKEVSVEKGIKDEKNPYDYYFH 160
Query: 216 VFQK 219
++++
Sbjct: 161 IYER 164
>sp|P04174|DYR_NEIGO Dihydrofolate reductase OS=Neisseria gonorrhoeae GN=folA PE=1 SV=1
Length = 162
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 46 VIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGPNVTTTSSLDQAIDLLRHKKSK 105
VIMGRKTW+S+P K PLPGR N+V++R +D T +SL+ A+ L
Sbjct: 42 VIMGRKTWESLPVK--PLPGRRNIVISRQAD----YCAAGAETVASLEVALALCAGA--- 92
Query: 106 GEIENVWVIGGSSIYKLTEPLMNRL 130
E ++GG+ IY PL L
Sbjct: 93 ---EEAVIMGGAQIYGQAMPLATDL 114
>sp|O62583|DYR_ENCCU Dihydrofolate reductase OS=Encephalitozoon cuniculi (strain GB-M1)
GN=DHFR-1 PE=3 SV=1
Length = 205
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 92/238 (38%), Gaps = 69/238 (28%)
Query: 1 MLMITVFLKVQGFFFEACQIFYTR---KDMAHFSRITKKTE--NSNRV-------NAVIM 48
ML + V L A + + R DMA F +++ + +R+ NAV+M
Sbjct: 1 MLALVVALASHRGIGNANALPWPRPLAADMAWFRTLSQSIPLISPDRIALAPSASNAVVM 60
Query: 49 GRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGPNVTTTSSL----DQAIDLLRHKKS 104
GR+TWDSIP +FRPL R NVVL+R GP +T ++ +A+D L S
Sbjct: 61 GRRTWDSIPSRFRPLANRINVVLSR---------GPARSTENTFFIQTFEALDSLPLPPS 111
Query: 105 KGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQESLNS 164
+VIGG +Y L +L S
Sbjct: 112 S----MTFVIGGRDVYSL--------------------------------------ALES 129
Query: 165 PYCDKVYVTQIHHHFDCDTFFPSLSDKFQLIKDPNIPDDVQKENDLNFQFKVFQKELA 222
++ T++ +CD FFP + + + +I DV + D + E A
Sbjct: 130 GRPHLIFATEVFESPECDVFFPHI--DWASYEKRDITRDVSRLIDRTLASAFYSPETA 185
>sp|O02604|DRTS_PLAVI Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Plasmodium vivax PE=1 SV=2
Length = 623
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 45/158 (28%)
Query: 34 TKKTENSNRV-NAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGPNVTTTSSL 92
T +N++++ N V+MGR +W+SIP++++PLP R NVVL++ LT +V +
Sbjct: 98 THGGDNADKLQNVVVMGRSSWESIPKQYKPLPNRINVVLSKT------LTKEDVKEKVFI 151
Query: 93 DQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFM 152
+ID L K + ++IGG+ +Y+
Sbjct: 152 IDSIDDLLLLLKKLKYYKCFIIGGAQVYR------------------------------- 180
Query: 153 FSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLSD 190
E L+ ++Y T+I+ + CD FFP +
Sbjct: 181 -------ECLSRNLIKQIYFTRINGAYPCDVFFPEFDE 211
>sp|P12833|DYR3_SALTM Dihydrofolate reductase type 3 OS=Salmonella typhimurium GN=dhfrIII
PE=1 SV=1
Length = 162
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 20/110 (18%)
Query: 21 FYTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQ 80
++ D+ HF +T V+MGR+T++SI RPLPGR NVV++RN Q
Sbjct: 23 WHLPADLRHFKAVTLG-------KPVVMGRRTFESI---GRPLPGRRNVVVSRN----PQ 68
Query: 81 LTGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRL 130
V SLD A+ LL + E +IGG +Y P +RL
Sbjct: 69 WQAEGVEVAPSLDAALALLT------DCEEAMIIGGGQLYAEALPRADRL 112
>sp|P46103|DRTS_PLAVN Bifunctional dihydrofolate reductase-thymidylate synthase
(Fragment) OS=Plasmodium vinckei PE=3 SV=1
Length = 182
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 44 NAVIMGRKTWDSIPEKFRPLPGRYNVVLTRN---SDLGSQLTGPNVTTTSSLDQAIDLLR 100
N V+MG+ +W+SIP KF+PL R N++L+R +L + + NV S+D+ +L+
Sbjct: 87 NIVVMGKTSWESIPSKFKPLENRINIILSRTLKKENLAKEYS--NVIIIKSVDELFPILK 144
Query: 101 HKKSKGEIENVWVIGGSSIYK 121
K ++IGG+S+YK
Sbjct: 145 CIK----YYKCFIIGGASVYK 161
>sp|P0ABQ6|DYR_SHIFL Dihydrofolate reductase OS=Shigella flexneri GN=folA PE=3 SV=1
Length = 159
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 23/106 (21%)
Query: 26 DMAHFSRITKKTENSNRVN-AVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGP 84
D+A F R N +N VIMGR TW+SI RPLPGR N++L+ T
Sbjct: 27 DLAWFKR--------NTLNKPVIMGRHTWESI---GRPLPGRKNIILSSQPG-----TDD 70
Query: 85 NVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRL 130
VT S+D+AI + G++ + VIGG +Y+ P +L
Sbjct: 71 RVTWVKSVDEAI------AACGDVPEIMVIGGGRVYEQFLPKAQKL 110
>sp|P0ABQ4|DYR_ECOLI Dihydrofolate reductase OS=Escherichia coli (strain K12) GN=folA
PE=1 SV=1
Length = 159
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 23/106 (21%)
Query: 26 DMAHFSRITKKTENSNRVN-AVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGP 84
D+A F R N +N VIMGR TW+SI RPLPGR N++L+ T
Sbjct: 27 DLAWFKR--------NTLNKPVIMGRHTWESI---GRPLPGRKNIILSSQPG-----TDD 70
Query: 85 NVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRL 130
VT S+D+AI + G++ + VIGG +Y+ P +L
Sbjct: 71 RVTWVKSVDEAI------AACGDVPEIMVIGGGRVYEQFLPKAQKL 110
>sp|P0ABQ5|DYR_ECOL6 Dihydrofolate reductase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=folA PE=3 SV=1
Length = 159
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 23/106 (21%)
Query: 26 DMAHFSRITKKTENSNRVN-AVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGP 84
D+A F R N +N VIMGR TW+SI RPLPGR N++L+ T
Sbjct: 27 DLAWFKR--------NTLNKPVIMGRHTWESI---GRPLPGRKNIILSSQPG-----TDD 70
Query: 85 NVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRL 130
VT S+D+AI + G++ + VIGG +Y+ P +L
Sbjct: 71 RVTWVKSVDEAI------AACGDVPEIMVIGGGRVYEQFLPKAQKL 110
>sp|P43791|DYR_HAEIN Dihydrofolate reductase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=folA PE=3 SV=1
Length = 160
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 68/168 (40%), Gaps = 55/168 (32%)
Query: 46 VIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGPNVTTTSSLDQAIDLLRHKKSK 105
VIMGRKT++SI RPLP R N+VL+R V S + A++ +R
Sbjct: 41 VIMGRKTFESIG---RPLPKRTNIVLSRQL-----FEHEGVIWKDSFESAVNFVR----- 87
Query: 106 GEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQESLNSP 165
+ + + +IGG ++K PK
Sbjct: 88 -DFDEIMLIGGGELFK---------QYLPK------------------------------ 107
Query: 166 YCDKVYVTQIHHHFDCDTFFPSLS-DKFQLIKDPNIPDDVQKENDLNF 212
DK+Y+TQI D DTFFP L+ +++++ D D Q D F
Sbjct: 108 -ADKLYLTQIQTELDGDTFFPQLNWEEWEIEFDEYRKADEQNRYDCRF 154
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,060,225
Number of Sequences: 539616
Number of extensions: 3859183
Number of successful extensions: 8677
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 8505
Number of HSP's gapped (non-prelim): 152
length of query: 258
length of database: 191,569,459
effective HSP length: 115
effective length of query: 143
effective length of database: 129,513,619
effective search space: 18520447517
effective search space used: 18520447517
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)