Query psy1579
Match_columns 258
No_of_seqs 180 out of 1320
Neff 3.4
Searched_HMMs 29240
Date Fri Aug 16 21:22:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1579.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1579hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rg9_A Bifunctional dihydrofol 100.0 1.1E-48 3.7E-53 347.2 12.5 179 2-220 30-239 (240)
2 3nzb_X Dihydrofolate reductase 100.0 1.5E-46 5E-51 324.1 14.5 179 2-221 8-206 (206)
3 3dau_A Dihydrofolate reductase 100.0 8.8E-45 3E-49 303.8 15.0 156 2-220 3-159 (159)
4 3irm_A Bifunctional dihydrofol 100.0 1.4E-45 4.9E-50 357.9 11.5 190 2-232 24-245 (521)
5 3ia4_A Dihydrofolate reductase 100.0 1.9E-44 6.4E-49 301.9 15.7 157 2-220 4-161 (162)
6 3tq8_A Dihydrofolate reductase 100.0 6.9E-44 2.4E-48 304.1 17.6 159 2-222 4-163 (178)
7 3s9u_A Dihydrofolate reductase 100.0 7E-44 2.4E-48 299.1 17.1 157 2-220 7-164 (165)
8 1kmv_A DHFR, dihydrofolate red 100.0 3.5E-43 1.2E-47 295.6 17.3 177 2-220 5-185 (186)
9 2bl9_A Dihydrofolate reductase 100.0 2.1E-43 7.1E-48 313.3 13.6 170 3-220 29-238 (238)
10 3dfr_A Dihydrofolate reductase 100.0 1.5E-42 5E-47 289.2 16.6 159 2-220 2-161 (162)
11 3qg2_A Bifunctional dihydrofol 100.0 1.6E-42 5.4E-47 341.6 13.3 173 2-222 29-231 (608)
12 3cse_A Dihydrofolate reductase 100.0 5.1E-42 1.7E-46 300.3 13.3 181 2-223 7-220 (227)
13 1aoe_A DHFR, dihydrofolate red 100.0 1.4E-41 4.7E-46 287.7 13.2 173 2-220 7-192 (192)
14 3ix9_A Dihydrofolate reductase 100.0 7.5E-41 2.6E-45 287.3 17.7 159 2-220 26-186 (190)
15 1j3k_A Bifunctional dihydrofol 100.0 4.2E-41 1.4E-45 305.2 13.4 172 2-221 29-230 (280)
16 1zdr_A Dihydrofolate reductase 100.0 9.4E-40 3.2E-44 269.6 19.0 158 2-220 3-161 (164)
17 3nrr_A Dihydrofolate reductase 100.0 3.1E-40 1.1E-44 320.2 16.6 171 2-222 16-193 (515)
18 2w3w_A Dihydrofolate reductase 100.0 1.1E-39 3.7E-44 271.8 17.1 158 2-220 7-167 (167)
19 2w9h_A DHFR, dihydrofolate red 100.0 8.9E-40 3E-44 269.0 15.0 154 2-220 4-158 (159)
20 1df7_A DHFR, dihydrofolate red 100.0 1.2E-39 4.1E-44 270.0 15.3 154 2-220 3-159 (159)
21 1vdr_A DHFR, dihydrofolate red 100.0 2.1E-38 7.1E-43 260.1 16.4 153 2-220 4-158 (162)
22 3hj3_A Chain A, crystal struct 100.0 6.8E-39 2.3E-43 311.2 13.1 169 2-219 8-177 (521)
23 1juv_A DHFR, dihydrofolate red 100.0 3E-34 1E-38 244.9 7.7 130 2-186 3-161 (193)
24 1cz3_A Dihydrofolate reductase 100.0 9.8E-29 3.3E-33 202.5 15.8 159 2-222 4-166 (168)
25 3jtw_A Dihydrofolate reductase 99.9 3.7E-27 1.3E-31 195.9 14.3 157 2-219 7-177 (178)
26 3ky8_A Putative riboflavin bio 99.9 8.6E-25 2.9E-29 186.2 14.9 162 2-221 23-196 (197)
27 2xw7_A Dihydrofolate reductase 99.9 2.8E-25 9.6E-30 182.6 10.8 159 2-220 7-174 (178)
28 2gd9_A Hypothetical protein YY 99.9 2.6E-23 8.8E-28 172.0 10.1 157 2-219 12-187 (189)
29 3kgy_A Bifunctional deaminase- 99.8 6.7E-20 2.3E-24 161.9 12.2 125 42-219 95-230 (231)
30 2b3z_A Riboflavin biosynthesis 99.4 3.1E-13 1.1E-17 124.9 10.8 151 2-200 161-360 (373)
31 2azn_A HTP reductase, putative 99.2 4.4E-10 1.5E-14 95.1 14.1 143 4-199 9-206 (219)
32 2hxv_A Diaminohydroxyphosphori 98.9 3.3E-08 1.1E-12 91.0 15.7 146 5-200 166-346 (360)
33 2g6v_A Riboflavin biosynthesis 98.8 4.8E-08 1.6E-12 91.4 12.4 146 5-200 180-383 (402)
34 2p4g_A Hypothetical protein; p 98.7 3.5E-07 1.2E-11 80.5 16.2 155 13-222 48-263 (270)
35 1to0_A Hypothetical UPF0247 pr 32.5 24 0.00083 29.6 2.5 11 108-118 101-111 (167)
36 1o6d_A Hypothetical UPF0247 pr 29.9 29 0.00098 29.1 2.5 13 108-120 95-107 (163)
37 1ns5_A Hypothetical protein YB 25.9 29 0.00099 28.8 1.8 12 108-119 96-107 (155)
38 3hl0_A Maleylacetate reductase 21.8 28 0.00095 31.5 1.1 73 45-121 14-101 (353)
No 1
>3rg9_A Bifunctional dihydrofolate reductase-thymidylate; oxidoreductase, oxidoreductase-oxidoreductase inhibitor complex; HET: NDP WRA; 2.00A {Trypanosoma brucei rhodesiense} PDB: 3qfx_A*
Probab=100.00 E-value=1.1e-48 Score=347.18 Aligned_cols=179 Identities=29% Similarity=0.474 Sum_probs=153.4
Q ss_pred eEEEEEeccceeecCCCcccCChhhhhHHHHHHcC------CCCCCccceEEEeccccccccCCCCCCCCCcEEEEcCcC
Q psy1579 2 LMITVFLKVQGFFFEACQIFYTRKDMAHFSRITKK------TENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNS 75 (258)
Q Consensus 2 ~~I~a~~~~~giG~~g~lPW~l~~Dm~~F~~iT~~------~~~~~~~naVIMGRKTweSip~~~rPL~~R~nvVlSr~~ 75 (258)
.+|+|++.+++||.+|+|||++|+||+||+++|++ .++++++|+||||||||||||.++||||+|.||||||+.
T Consensus 30 ~lIvA~s~ng~IG~~g~LPW~lp~Dm~~Fk~~T~g~p~~~~~~~~~~~naVIMGRKT~ESip~~~rPLp~R~nIVlSr~~ 109 (240)
T 3rg9_A 30 SVVVASDEKGGIGDGGTIPWEIPEDMQYFRRVTTNLRGKNVKPSPSKRNAVVMGRKTWDSLPPKFRPLSNRLNVVLSRSA 109 (240)
T ss_dssp EEEEEEETTCEEESSSSCSCCCHHHHHHHHHHHHCCSSSSCCCBTTBEEEEEEEHHHHHHSCGGGSSCTTSEEEEECSSC
T ss_pred EEEEEECCCCcEECCCCcCCCCHHHHHHHHHHHcCCcccccccccccCcEEEEehhHHhhhhhhccCCCCCeEEEEccCc
Confidence 58999999999999999999999999999999999 567899999999999999999988999999999999987
Q ss_pred CCCC---CC---------CCCcEEEeCCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCcccccchhhh
Q psy1579 76 DLGS---QL---------TGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLC 143 (258)
Q Consensus 76 ~~~~---~~---------~~~~v~v~~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~ 143 (258)
.... .. ..+++.+++|+++|++.+++.......++||||||++||+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~v~v~~sl~eal~~l~~~~~~~~~~~I~VIGGa~IY~---------------------- 167 (240)
T 3rg9_A 110 TKEQLLAGIPDPIKRAEAANDVVAVNGGLEDALRMLVSKEHTSSIETVFCIGGGTIYK---------------------- 167 (240)
T ss_dssp CHHHHHTTCSSHHHHHHHGGGEEEESSCHHHHHHHTTSHHHHHHEEEEEECCCHHHHH----------------------
T ss_pred ccccccccccccccccccCCCCEEEECCHHHHHHHHhccccccCCCeEEEECCHHHHH----------------------
Confidence 5300 00 1467899999999999997641111247899999999999
Q ss_pred cccCCccchhhhhhhHhhhCCC---cccEEEEEeec-ccccccccC--CCCC-CC-----cEEEec-CCCCCCCcccCCc
Q psy1579 144 TRKSNASFMFSVLSLQESLNSP---YCDKVYVTQIH-HHFDCDTFF--PSLS-DK-----FQLIKD-PNIPDDVQKENDL 210 (258)
Q Consensus 144 ~~~~~~~~~~s~l~~~~~l~~p---~~D~i~lT~I~-~~fe~DtfF--P~l~-~~-----f~li~~-~~i~~~~~een~~ 210 (258)
++|.++ +||++|+|+|+ ..|+||+|| |.++ +. |++++. +.+. .+++|++
T Consensus 168 ----------------~~L~~~~~~l~D~l~lT~I~p~~~egDtfFp~P~~d~~~~~~~~w~~~~~~~~~~--~~~~~~~ 229 (240)
T 3rg9_A 168 ----------------QALCAPCVNVLQAIHRTVVRPASNSCSVFFDIPAAGTKTPEGLELVRESITDERV--STGAGGK 229 (240)
T ss_dssp ----------------HHTSTTGGGGEEEEEEEEEESCCSSCCEECCCCCTTCCCTTSCCEEEEEECCCEE--CSSTTCC
T ss_pred ----------------HHHhcCccccCCEEEEEEEcCCCcCcceecCCCCCChhhcccCceEEEEeecccc--ccCCCCC
Confidence 999888 99999999999 999999999 8887 66 999874 3322 2357999
Q ss_pred cEEEEEEEEc
Q psy1579 211 NFQFKVFQKE 220 (258)
Q Consensus 211 ~f~f~~y~r~ 220 (258)
.|+|.+|+|+
T Consensus 230 ~y~f~~y~r~ 239 (240)
T 3rg9_A 230 KYQFEKLVPR 239 (240)
T ss_dssp EEEEEEEEEC
T ss_pred ceEEEEEEeC
Confidence 9999999997
No 2
>3nzb_X Dihydrofolate reductase; pneumocystius carinii DHFR inhibitor complexes, oxidoreducta oxidoreductase-oxidoreductase inhibitor complex; HET: D2N NAP; 1.45A {Pneumocystis carinii} SCOP: c.71.1.1 PDB: 1daj_A* 1cd2_A* 1e26_A* 1klk_A* 1ly3_A* 1ly4_A* 1s3y_A* 2cd2_A* 2fzh_A* 1dyr_A* 3cd2_A* 3nz6_X* 3nz9_X* 3nza_X* 2fzi_A* 3nzc_X* 3td8_A* 4cd2_A* 1vj3_A*
Probab=100.00 E-value=1.5e-46 Score=324.13 Aligned_cols=179 Identities=32% Similarity=0.644 Sum_probs=155.9
Q ss_pred eEEEEEeccceeecCCCcccCChhhhhHHHHHHcCC---CCCCccceEEEeccccccccCCCCCCCCCcEEEEcCcCCCC
Q psy1579 2 LMITVFLKVQGFFFEACQIFYTRKDMAHFSRITKKT---ENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLG 78 (258)
Q Consensus 2 ~~I~a~~~~~giG~~g~lPW~l~~Dm~~F~~iT~~~---~~~~~~naVIMGRKTweSip~~~rPL~~R~nvVlSr~~~~~ 78 (258)
.+|+|++.+++||.+|+|||++++||+||+++|++. .+++++++||||||||||||.++|||++|.||||||+...
T Consensus 8 ~livA~s~dg~IG~~g~lpW~l~~D~~~F~~~t~~~~~~~~~~~~~~vIMGRkTyesi~~~~~Pl~~r~niVlSr~~~~- 86 (206)
T 3nzb_X 8 TLIVALTTSYGIGRSNSLPWKLKKEISYFKRVTSFVPTFDSFESMNVVLMGRKTWESIPLQFRPLKGRINVVITRNESL- 86 (206)
T ss_dssp EEEEEEETTCEEEBTTBCSSCCHHHHHHHHHHHHCCCTTGGGTEEEEEEEEHHHHHHSCGGGCSCTTSEEEEECSSCCC-
T ss_pred EEEEEECCCCcEeCCCCcCCCChhHHHHHHHHHccCccccccccCCEEEECchHHHhhhhcccCCCCCeEEEEccCCCC-
Confidence 589999999999999999999999999999999984 3457789999999999999987899999999999998753
Q ss_pred CCCCCCcEEEeCCHHHHHHHHHhhccCC---CCCcEEEEeChhhhcccccccccccCCcccccchhhhcccCCccchhhh
Q psy1579 79 SQLTGPNVTTTSSLDQAIDLLRHKKSKG---EIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSV 155 (258)
Q Consensus 79 ~~~~~~~v~v~~sl~~ai~~l~~~~~~~---~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 155 (258)
...+++++++|+++|++.|++..... ..++||||||++||+
T Consensus 87 --~~~~~~~v~~sl~eal~~l~~~~~~~~~~~~~~i~ViGG~~iy~---------------------------------- 130 (206)
T 3nzb_X 87 --DLGNGIHSAKSLDHALELLYRTYGSESSVQINRIFVIGGAQLYK---------------------------------- 130 (206)
T ss_dssp --CCCSSCEEESSHHHHHHHHHHHSCSSSSSEEEEEEECCCHHHHH----------------------------------
T ss_pred --CCCCCEEEECCHHHHHHHHhccccccccCCCCcEEEECcHHHHH----------------------------------
Confidence 22467889999999999998741111 247899999999999
Q ss_pred hhhHhhhCCCcccEEEEEeecccccccccCC-CCC-C----CcEEEec--------CCCCCCCcccCCccEEEEEEEEcC
Q psy1579 156 LSLQESLNSPYCDKVYVTQIHHHFDCDTFFP-SLS-D----KFQLIKD--------PNIPDDVQKENDLNFQFKVFQKEL 221 (258)
Q Consensus 156 l~~~~~l~~p~~D~i~lT~I~~~fe~DtfFP-~l~-~----~f~li~~--------~~i~~~~~een~~~f~f~~y~r~~ 221 (258)
++|++++||+++||+|+..++||+||| .++ + +|++++. +.++++.++||++.|+|++|+|++
T Consensus 131 ----~~L~~~l~Del~lT~i~~~~~gd~~FP~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~y~f~~y~r~~ 206 (206)
T 3nzb_X 131 ----AAMDHPKLDRIMATIIYKDIHCDVFFPLKFRDKEWSSVWKKEKHSDLESWVGTKVPHGKINEDGFDYEFEMWTRDL 206 (206)
T ss_dssp ----HHHHSTTEEEEEEEEECSCCCCSEECSSCTTSGGGTTTCEECCHHHHHHHHTSCCCCSCEEETTEEEEEEEEECCC
T ss_pred ----HHhhCCCCCEEEEEEcccccCCCccCCcccCcccccCCcEEEEEeeccccccccccccccccCCeeEEEEEEEEcC
Confidence 999999999999999999999999999 887 2 6999874 355666788999999999999864
No 3
>3dau_A Dihydrofolate reductase; oxidoreductase, pseudo-rossmann fold, adenine nucleotide BIN domain, antibiotic resistance, methotrexate resistance; HET: MTX NAP; 1.50A {Escherichia coli} SCOP: c.71.1.1 PDB: 1ddr_A* 1dds_A* 3k74_A 1ra9_A* 1dre_A* 1drh_A* 1dyi_A* 1dyh_A* 1jol_A* 1jom_A* 1ra1_A* 1dyj_A* 1ra3_A* 1ra8_A* 1ra2_A* 1rb2_A* 1rb3_A* 1rc4_A* 1rd7_A* 1re7_A* ...
Probab=100.00 E-value=8.8e-45 Score=303.85 Aligned_cols=156 Identities=31% Similarity=0.540 Sum_probs=141.3
Q ss_pred eEEEEEeccceeecCCCcccCChhhhhHHHHHHcCCCCCCccceEEEeccccccccCCCCCCCCCcEEEEcCcCCCCCCC
Q psy1579 2 LMITVFLKVQGFFFEACQIFYTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQL 81 (258)
Q Consensus 2 ~~I~a~~~~~giG~~g~lPW~l~~Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip~~~rPL~~R~nvVlSr~~~~~~~~ 81 (258)
.+|+|++.+++||.+|+|||++|+||+||+++|++ ++||||||||||+| ||||+|.||||||+. .
T Consensus 3 ~li~A~s~~g~IG~~g~lpW~l~~D~~~Fk~~t~~-------~~vIMGRkT~esi~---~plp~r~~iVlSr~~-~---- 67 (159)
T 3dau_A 3 SLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLN-------KPVIMGRHTWESIG---RPLPGRKNIILSSQP-G---- 67 (159)
T ss_dssp EEEEEECGGGEEEBTTBCSSCCHHHHHHHHHHHTT-------SCEEEEHHHHHHHC---SCCTTSCEEEECSSC-C----
T ss_pred EEEEEECCCCeEECCCCcCcCChhHHHHHHHHhcC-------CeEEEechHHhhcc---cccCCCEEEEECCCC-C----
Confidence 58999999999999999999999999999999998 69999999999998 799999999999987 3
Q ss_pred CCCcEEEeCCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCcccccchhhhcccCCccchhhhhhhHhh
Q psy1579 82 TGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQES 161 (258)
Q Consensus 82 ~~~~v~v~~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~~~ 161 (258)
..+++++++|+++|++.++ +.++||||||+++|+ ++
T Consensus 68 ~~~~~~v~~s~~~al~~~~------~~~~i~iiGG~~iy~--------------------------------------~~ 103 (159)
T 3dau_A 68 TDDRVTWVKSVDEAIAACG------DVPEIMVIGGGRVYE--------------------------------------QF 103 (159)
T ss_dssp SCTTSEEESSHHHHHHTTC------SCSCEEECCCHHHHH--------------------------------------HH
T ss_pred CCCCeEEECCHHHHHHHhc------CCCCEEEECCHHHHH--------------------------------------HH
Confidence 2467889999999998774 357899999999999 89
Q ss_pred hCCCcccEEEEEeecccccccccCCCCC-CCcEEEecCCCCCCCcccCCccEEEEEEEEc
Q psy1579 162 LNSPYCDKVYVTQIHHHFDCDTFFPSLS-DKFQLIKDPNIPDDVQKENDLNFQFKVFQKE 220 (258)
Q Consensus 162 l~~p~~D~i~lT~I~~~fe~DtfFP~l~-~~f~li~~~~i~~~~~een~~~f~f~~y~r~ 220 (258)
| ++||++++|+|+..++||+|||.++ ++|++++.+.++. +++|++.|+|.+|+|+
T Consensus 104 l--~~~D~l~lT~i~~~~~Gd~~Fp~~~~~~~~~~~~~~~~~--~~~~~~~~~f~~y~r~ 159 (159)
T 3dau_A 104 L--PKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDA--DAQNSHSYCFEILERR 159 (159)
T ss_dssp G--GGCSEEEEEEECCCCCCSEECCCCCGGGEEEEEEEEECC--BTTBSSCEEEEEEEEC
T ss_pred H--hhCCEEEEEEcccccCccccCCCCChHHCEEEEEEeccc--ccCCCceEEEEEEEEC
Confidence 8 5999999999999999999999998 7999998765554 3678999999999984
No 4
>3irm_A Bifunctional dihydrofolate reductase-thymidylate; DHFR-TS antifolate complex, methyltransfe multifunctional enzyme, NADP; HET: 1CY; 2.10A {Trypanosoma cruzi} PDB: 3inv_A* 3irn_A* 3iro_A* 2h2q_A* 3cl9_A* 3clb_A* 3hbb_A* 3kjs_A*
Probab=100.00 E-value=1.4e-45 Score=357.87 Aligned_cols=190 Identities=31% Similarity=0.499 Sum_probs=162.4
Q ss_pred eEEEEEeccceeecCCCcccCChhhhhHHHHHHcC------CCCCCccceEEEeccccccccCCCCCCCCCcEEEEcCcC
Q psy1579 2 LMITVFLKVQGFFFEACQIFYTRKDMAHFSRITKK------TENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNS 75 (258)
Q Consensus 2 ~~I~a~~~~~giG~~g~lPW~l~~Dm~~F~~iT~~------~~~~~~~naVIMGRKTweSip~~~rPL~~R~nvVlSr~~ 75 (258)
.+|+|++++++||.+|+|||++|+||+||+++|++ +++|+++|+||||||||||||.++||||+|.||||||+.
T Consensus 24 slIvA~~~ng~IG~~g~LPW~Lp~Dmk~Fk~~T~g~~~~~~~~~~~~~naVIMGRKT~ESIP~k~rPLP~R~NIVLSR~~ 103 (521)
T 3irm_A 24 SLVVAVDEHGGIGDGRSIPWNVPEDMKFFRDLTTKLRGKNVKPSPAKRNAVVMGRKTWDSIPPKFRPLPGRLNVVLSSTL 103 (521)
T ss_dssp EEEEEEETTSEEESSSCCCCCCHHHHHHHHHHHHCCSSSSCCCBTTBEEEEEEEHHHHHTSCGGGCSCTTEEEEEECSSC
T ss_pred EEEEEECCCCceecCCCcCCCChhHHHHHHHHhcCCCcccccCcccccceEEEecchhhCcccccCCCCCCeEEEEeccc
Confidence 58999999999999999999999999999999999 778899999999999999999988999999999999987
Q ss_pred CCC----CC--------CCCCcEEEeCCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCcccccchhhh
Q psy1579 76 DLG----SQ--------LTGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLC 143 (258)
Q Consensus 76 ~~~----~~--------~~~~~v~v~~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~ 143 (258)
... .. ...+++++++|+++|++.+++.......++||||||++||+
T Consensus 104 ~~~~~~~~~p~~~~~~~~~~~~v~V~~SleeAL~~l~~~~~~~~~~~VfVIGGa~IY~---------------------- 161 (521)
T 3irm_A 104 TTQHLLDGLPDEEKRNLHADSIVAVNGGLEQALRLLASPNYTPSIETVYCIGGGSVYA---------------------- 161 (521)
T ss_dssp CHHHHHHTSSSHHHHHHHGGGEEEESSCHHHHHHHHTSTTTTTTEEEEEECCCHHHHH----------------------
T ss_pred ccccccccccccccccccCCCCeEEECCHHHHHHHHhccccccCCCeEEEEcCHHHHH----------------------
Confidence 530 00 02467899999999999998643223457999999999999
Q ss_pred cccCCccchhhhhhhHhhhCCC---cccEEEEEeec-ccccccccC--CCCC-CC-----cEEEecCCCCCCCcccCC--
Q psy1579 144 TRKSNASFMFSVLSLQESLNSP---YCDKVYVTQIH-HHFDCDTFF--PSLS-DK-----FQLIKDPNIPDDVQKEND-- 209 (258)
Q Consensus 144 ~~~~~~~~~~s~l~~~~~l~~p---~~D~i~lT~I~-~~fe~DtfF--P~l~-~~-----f~li~~~~i~~~~~een~-- 209 (258)
++|+++ +||++++|+|+ ..|+||||| |.++ +. |++++.+.. .+++++
T Consensus 162 ----------------~~L~~~~~~l~D~l~lT~I~p~~~egDtfFp~P~~d~~~~~~~~w~~~~~~~~---~~~~~~~~ 222 (521)
T 3irm_A 162 ----------------EALRPPCVHLLQAIYRTTIRASESSCSVFFRVPESGTEAAAGIEWQRETISEE---LTSANGNE 222 (521)
T ss_dssp ----------------HHTSTTGGGGEEEEEEEEECCSSCCCSEECCCCCTTSGGGTTCCEEEEEECCC---EECSSSSC
T ss_pred ----------------HHHhCCccccCCEEEEEEecCCCcccceecCCCCCChhhccccceEEEEeecc---cccCCCCe
Confidence 999888 99999999999 999999999 8888 55 999876432 234467
Q ss_pred ccEEEEEEEEcCCCCCccccccc
Q psy1579 210 LNFQFKVFQKELAPKPHSLNVWN 232 (258)
Q Consensus 210 ~~f~f~~y~r~~~~~~~~l~~~~ 232 (258)
+.|+|.+|+|+..+..++|++=+
T Consensus 223 ~~y~F~~y~r~n~~~~~Yl~l~~ 245 (521)
T 3irm_A 223 TKYYFEKLIPRNREEEQYLSLVD 245 (521)
T ss_dssp CEEEEEEEEECCHHHHHHHHHHH
T ss_pred eeEEEEEEEECChhHHHHHHHHH
Confidence 99999999998766667776544
No 5
>3ia4_A Dihydrofolate reductase; NADPH, methotrexate, oxidoreductase; HET: NDP MTX; 1.70A {Moritella profunda} SCOP: c.71.1.0 PDB: 3ia5_A 2zza_A*
Probab=100.00 E-value=1.9e-44 Score=301.88 Aligned_cols=157 Identities=29% Similarity=0.545 Sum_probs=142.1
Q ss_pred eEEEEEeccceeecCCCcccCChhhhhHHHHHHcCCCCCCccceEEEeccccccccCCCCCCCCCcEEEEcCcCCCCCCC
Q psy1579 2 LMITVFLKVQGFFFEACQIFYTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQL 81 (258)
Q Consensus 2 ~~I~a~~~~~giG~~g~lPW~l~~Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip~~~rPL~~R~nvVlSr~~~~~~~~ 81 (258)
.+|+|++.+++||.+|+|||++|+||+||+++|++ ++||||||||||+| +|||+|.|||+||+...
T Consensus 4 ~li~A~s~dg~IG~~g~lpW~~~~D~~~Fk~~t~g-------~~vIMGRkTyesi~---~plp~r~~iVlSr~~~~---- 69 (162)
T 3ia4_A 4 SMIAALANNRVIGLDNKMPWHLPAELQLFKRATLG-------KPIVMGRNTFESIG---RPLPGRLNIVLSRQTDY---- 69 (162)
T ss_dssp EEEEEECGGGEEEBTTBCSSCCHHHHHHHHHHHTT-------SCEEEEHHHHHHHC---SCCTTSCEEEECCCTTC----
T ss_pred EEEEEECCCCcEECCCCcCCCCHhHHHHHHHHhcC-------cEEEEEchHHhhhh---hhcCCCeEEEEcCCCCC----
Confidence 58999999999999999999999999999999997 79999999999998 79999999999998753
Q ss_pred CCCcEEEeCCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCcccccchhhhcccCCccchhhhhhhHhh
Q psy1579 82 TGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQES 161 (258)
Q Consensus 82 ~~~~v~v~~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~~~ 161 (258)
..+++.+++|+++|++.+++ .++||||||+++|+ ++
T Consensus 70 ~~~~~~v~~s~~~al~~l~~------~~~i~viGG~~iy~--------------------------------------~~ 105 (162)
T 3ia4_A 70 QPEGVTVVATLEDAVVAAGD------VEELMIIGGATIYN--------------------------------------QC 105 (162)
T ss_dssp CCTTSEEESSHHHHHHHHTT------CSEEEECCCHHHHH--------------------------------------HH
T ss_pred CCCCeEEECCHHHHHHHhhC------CCCEEEECCHHHHH--------------------------------------HH
Confidence 34678899999999998864 47899999999999 88
Q ss_pred hCCCcccEEEEEeecccccccccCCCCC-CCcEEEecCCCCCCCcccCCccEEEEEEEEc
Q psy1579 162 LNSPYCDKVYVTQIHHHFDCDTFFPSLS-DKFQLIKDPNIPDDVQKENDLNFQFKVFQKE 220 (258)
Q Consensus 162 l~~p~~D~i~lT~I~~~fe~DtfFP~l~-~~f~li~~~~i~~~~~een~~~f~f~~y~r~ 220 (258)
| ++||++++|+|+..++||+|||.++ ++|++++.+..+. +++|++.|+|.+|+|+
T Consensus 106 l--~l~Del~lT~i~~~~~gd~~Fp~~~~~~w~~~~~~~~~~--~~~~~~~~~f~~y~r~ 161 (162)
T 3ia4_A 106 L--AAADRLYLTHIELTTEGDTWFPDYEQYNWQEIEHESYAA--DDKNPHNYRFSLLERV 161 (162)
T ss_dssp G--GGCSEEEEEEECCCCCCSEECCCGGGSCEEEEEEEEECC--BTTBCSCEEEEEEEEC
T ss_pred H--HhCCEEEEEEccccccccccCCCCChHHCEEEEEEeccc--cCCCCccEEEEEEEEC
Confidence 8 5999999999999999999999998 8999998754443 4578899999999996
No 6
>3tq8_A Dihydrofolate reductase; oxidoreductase-oxidoreductase inhib complex; HET: NDP TOP; 1.90A {Coxiella burnetii} SCOP: c.71.1.0 PDB: 3tq9_A* 3tqa_A* 3tqb_A*
Probab=100.00 E-value=6.9e-44 Score=304.13 Aligned_cols=159 Identities=31% Similarity=0.500 Sum_probs=142.1
Q ss_pred eEEEEEeccceeecCCCcccCChhhhhHHHHHHcCCCCCCccceEEEeccccccccCCCCCCCCCcEEEEcCcCCCCCCC
Q psy1579 2 LMITVFLKVQGFFFEACQIFYTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQL 81 (258)
Q Consensus 2 ~~I~a~~~~~giG~~g~lPW~l~~Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip~~~rPL~~R~nvVlSr~~~~~~~~ 81 (258)
.+|+|++.+++||.+|+|||++|+||+||+++|.+ ++||||||||||+| +|||+|.||||||+...
T Consensus 4 ~li~A~s~dg~IG~~g~lpW~lp~Dl~~Fk~~T~g-------~~vIMGRkTyesi~---~plp~R~niVlSr~~~~---- 69 (178)
T 3tq8_A 4 TLIAAMDKNRLIGRNNELPWHLPADLAHFKSITLG-------KPIVMGRRTFDSIG---KPLPHRRNIVITQQKNL---- 69 (178)
T ss_dssp EEEEEEETTCEEEBTTBCSSCCHHHHHHHHHHHTT-------SEEEEEHHHHHHHC---SCCTTSEEEEECSCTTC----
T ss_pred EEEEEECCCCcEECCCCcCCcCHHHHHHHHHhhcC-------CEEEEechHHhhhh---hccCCCeEEEEcCCCCc----
Confidence 58999999999999999999999999999999998 79999999999998 79999999999999763
Q ss_pred CCCcEEEeCCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCcccccchhhhcccCCccchhhhhhhHhh
Q psy1579 82 TGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQES 161 (258)
Q Consensus 82 ~~~~v~v~~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~~~ 161 (258)
..+++++++|+++|++.++. .++||||||++||+ ++
T Consensus 70 ~~~~v~v~~sl~eal~~l~~------~~~i~viGG~~iy~--------------------------------------~~ 105 (178)
T 3tq8_A 70 IIEGCDIFYSLDDALSALTK------EPEVIIIGGARIFK--------------------------------------EA 105 (178)
T ss_dssp CCTTSEEESSHHHHHHHTTT------CSEEEEEECHHHHH--------------------------------------HH
T ss_pred CCCCeEEECCHHHHHHHhhC------CCCEEEECCHHHHH--------------------------------------HH
Confidence 34678889999999998874 47899999999999 89
Q ss_pred hCCCcccEEEEEeecccccccccCCCCC-CCcEEEecCCCCCCCcccCCccEEEEEEEEcCC
Q psy1579 162 LNSPYCDKVYVTQIHHHFDCDTFFPSLS-DKFQLIKDPNIPDDVQKENDLNFQFKVFQKELA 222 (258)
Q Consensus 162 l~~p~~D~i~lT~I~~~fe~DtfFP~l~-~~f~li~~~~i~~~~~een~~~f~f~~y~r~~~ 222 (258)
| ++||++++|+|+..++||+|||.++ ++|++++.+..+. ++++++.|+|.+|+|+..
T Consensus 106 l--~l~Del~lT~i~~~~~Gd~~Fp~~~~~~w~l~~~~~~~~--~~~~~~~~~f~~y~r~~~ 163 (178)
T 3tq8_A 106 L--PKADKMILTIINHSFEGDVYFPEWNDKEWKITSQIKHER--DEKNPYPFQFLELRRLEN 163 (178)
T ss_dssp G--GGCSEEEEEEESSCCCCSEECCCCCTTSEEEEEEEEECC--C--CCSCEEEEEEEECCC
T ss_pred H--HhCCEEEEEEccccccccCcCCCCChHHCEEEEEEeccc--cccCCccEEEEEEEECCc
Confidence 8 5999999999999999999999998 8999998755443 467899999999999744
No 7
>3s9u_A Dihydrofolate reductase; oxidoreductase; HET: NAP 5DR; 1.90A {Bacillus anthracis} PDB: 3sa1_A* 3sa2_A* 3sai_A* 3e0b_A* 3jvx_A* 3jwm_A* 3jwk_A* 3jw5_A* 3jwf_A* 3jwc_A* 3jw3_A* 3dat_A* 2qk8_A* 3fl8_A* 3fl9_A* 2kgk_A*
Probab=100.00 E-value=7e-44 Score=299.14 Aligned_cols=157 Identities=27% Similarity=0.555 Sum_probs=142.8
Q ss_pred eEEEEEeccceeecCCCcccCChhhhhHHHHHHcCCCCCCccceEEEeccccccccCCCCCCCCCcEEEEcCcCCCCCCC
Q psy1579 2 LMITVFLKVQGFFFEACQIFYTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQL 81 (258)
Q Consensus 2 ~~I~a~~~~~giG~~g~lPW~l~~Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip~~~rPL~~R~nvVlSr~~~~~~~~ 81 (258)
.+|+|++.+++||.+|+|||++|+||+||+++|.+ ++||||||||||+| +|||+|.|||+||+...
T Consensus 7 ~li~A~s~dg~Ig~~g~lpW~~~~D~~~F~~~t~~-------~~vIMGRkTyesi~---~plp~r~~iVlSr~~~~---- 72 (165)
T 3s9u_A 7 SFMVAMDENRVIGKDNNLPWRLPSELQYVKKTTMG-------HPLIMGRKNYEAIG---RPLPGRRNIIVTRNEGY---- 72 (165)
T ss_dssp EEEEEEETTCEEEBTTBCSCCCHHHHHHHHHHHTT-------SCEEEEHHHHHHHC---SCCTTSCEEEECSCTTC----
T ss_pred EEEEEECCCCcEECCCCcCCCCHhHHHHHHHhhcC-------CEEEEcchHHhhhh---hccCCCeEEEECCCCcc----
Confidence 57999999999999999999999999999999997 89999999999998 79999999999999763
Q ss_pred CCCcEEEeCCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCcccccchhhhcccCCccchhhhhhhHhh
Q psy1579 82 TGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQES 161 (258)
Q Consensus 82 ~~~~v~v~~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~~~ 161 (258)
..+++++++|+++|++.+++. ++||||||+++|+ ++
T Consensus 73 ~~~~v~v~~~~~~al~~l~~~------~~i~viGG~~iy~--------------------------------------~~ 108 (165)
T 3s9u_A 73 HVEGCEVAHSVEEVFELCKNE------EEIFIFGGAQIYD--------------------------------------LF 108 (165)
T ss_dssp CCTTCEEESSHHHHHHHTTTC------SEEEECCCHHHHH--------------------------------------HH
T ss_pred CCCCEEEECCHHHHHHHhhcC------CCEEEECCHHHHH--------------------------------------HH
Confidence 346888899999999988752 6899999999999 88
Q ss_pred hCCCcccEEEEEeecccccccccCCCCC-CCcEEEecCCCCCCCcccCCccEEEEEEEEc
Q psy1579 162 LNSPYCDKVYVTQIHHHFDCDTFFPSLS-DKFQLIKDPNIPDDVQKENDLNFQFKVFQKE 220 (258)
Q Consensus 162 l~~p~~D~i~lT~I~~~fe~DtfFP~l~-~~f~li~~~~i~~~~~een~~~f~f~~y~r~ 220 (258)
| ++||++++|+|+..++||+|||.++ ++|++++.+..+. +++|++.|+|.+|+|+
T Consensus 109 l--~l~Del~lT~ip~~~~Gd~~Fp~~~~~~~~l~~~~~~~~--~~~~~~~~~f~~y~r~ 164 (165)
T 3s9u_A 109 L--PYVDKLYITKIHHAFEGDTFFPEMDMTNWKEVFVEKGLT--DEKNPYTYYYHVYEKQ 164 (165)
T ss_dssp G--GGCCEEEEEEESSCCCCSEECCCCCCTTEEEEEEEECCC--SSSSCSCEEEEEEEEC
T ss_pred H--hhCCEEEEEEccccccCCCcCCCCChHHCEEEEEEeccc--cCCCCceEEEEEEEEC
Confidence 8 7999999999999999999999998 8999998765543 4679999999999996
No 8
>1kmv_A DHFR, dihydrofolate reductase; oxidoreductase, antiparasitic drugs, lipophilic antifolates; HET: LII NDP; 1.05A {Homo sapiens} SCOP: c.71.1.1 PDB: 1dhf_A* 1hfr_A* 1drf_A* 1kms_A* 1ohj_A* 1ohk_A* 1pd8_A* 1pd9_A* 1pdb_A 1s3u_A* 1s3v_A* 1s3w_A* 1u72_A* 1yho_A* 2c2s_A* 2c2t_A* 2dhf_A* 3ghw_A* 3ntz_A* 3nu0_A* ...
Probab=100.00 E-value=3.5e-43 Score=295.63 Aligned_cols=177 Identities=36% Similarity=0.626 Sum_probs=156.5
Q ss_pred eEEEEEeccceeecCCCccc-CChhhhhHHHHHHcCCCCCCccceEEEeccccccccCCCCCCCCCcEEEEcCcCCCCCC
Q psy1579 2 LMITVFLKVQGFFFEACQIF-YTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQ 80 (258)
Q Consensus 2 ~~I~a~~~~~giG~~g~lPW-~l~~Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip~~~rPL~~R~nvVlSr~~~~~~~ 80 (258)
.+|+|++.+++||.+|++|| ++++||+||++.|.+..+|++.|+||||||||||+|.++||||+|.|||+||+...
T Consensus 5 ~~i~A~s~dG~Ig~~g~lpW~~~~~d~~~f~~~t~~~~~~~~~d~viMGRkTyes~~~~~~pl~~r~~iVlSr~~~~--- 81 (186)
T 1kmv_A 5 NCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELKE--- 81 (186)
T ss_dssp EEEEEECTTCEEEBTTBCSSCCCHHHHHHHHHHHHCCSSTTCEEEEEEEHHHHHHSCGGGCSCTTSEEEEECSSCSS---
T ss_pred EEEEEECCCCCEeCCCccCCccCcHHHHHHHHHHcCCCCcCCccEEEEechHHhhcCcccCCCCCCeEEEECCCCcc---
Confidence 68999999999999999999 99999999999999987888899999999999999977899999999999998652
Q ss_pred CCCCcE-EEeCCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCcccccchhhhcccCCccchhhhhhhH
Q psy1579 81 LTGPNV-TTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQ 159 (258)
Q Consensus 81 ~~~~~v-~v~~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~ 159 (258)
..+++ .+.+|+++|++.|++.......++||||||+++|+
T Consensus 82 -~~~~~~~v~~~~~~al~~lk~~~~~~~~~~i~ViGG~~l~~-------------------------------------- 122 (186)
T 1kmv_A 82 -PPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYK-------------------------------------- 122 (186)
T ss_dssp -CCTTCSEEESSHHHHHHHHTSTTTTTTEEEEEECCCHHHHH--------------------------------------
T ss_pred -CCCCCEEEECCHHHHHHHHhhcccccCCCeEEEEcCHHHHH--------------------------------------
Confidence 24566 88899999999997642222468999999999999
Q ss_pred hhhCCCcccEEEEEeecccccccccCCCCC-CCcEEEecC-CCCCCCcccCCccEEEEEEEEc
Q psy1579 160 ESLNSPYCDKVYVTQIHHHFDCDTFFPSLS-DKFQLIKDP-NIPDDVQKENDLNFQFKVFQKE 220 (258)
Q Consensus 160 ~~l~~p~~D~i~lT~I~~~fe~DtfFP~l~-~~f~li~~~-~i~~~~~een~~~f~f~~y~r~ 220 (258)
++|++++||++++|.||..++||+|||.++ ..|++++.. ..+.+.++++++.|+|.+|+|+
T Consensus 123 ~~l~~~lvDel~lt~ip~~~g~d~~Fp~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~y~r~ 185 (186)
T 1kmv_A 123 EAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYEKN 185 (186)
T ss_dssp HHHTSCSCEEEEEEEESSCCCCSEECCCCCTTTCEECSCCTTCCCSCEEETTEEEEEEEEEEC
T ss_pred HHhcCCCCCEEEEEEeCcccCCCeECCCCChhHcEEEEeccccccccccCCCceEEEEEEEEC
Confidence 999999999999999999999999999987 889998763 2444567889999999999996
No 9
>2bl9_A Dihydrofolate reductase-thymidylate synthase; plamodium vivax, pyrimethamine, malaria, drug resistance, oxidoreductase; HET: NDP CP6; 1.9A {Plasmodium vivax} PDB: 2blb_A* 2blc_A* 2bla_A*
Probab=100.00 E-value=2.1e-43 Score=313.30 Aligned_cols=170 Identities=28% Similarity=0.527 Sum_probs=147.1
Q ss_pred EEEEEeccceeecCCCccc-CChhhhhHHHHHHcCCCC--------------------------------------CCcc
Q psy1579 3 MITVFLKVQGFFFEACQIF-YTRKDMAHFSRITKKTEN--------------------------------------SNRV 43 (258)
Q Consensus 3 ~I~a~~~~~giG~~g~lPW-~l~~Dm~~F~~iT~~~~~--------------------------------------~~~~ 43 (258)
+|+|.+.++|||.+|+||| ++|+||+||+++|+++++ ++..
T Consensus 29 ~~~~~~~~~~IG~~g~LPW~~l~~Dm~~Fk~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~f~~~~g 108 (238)
T 2bl9_A 29 EPFSPRTFRGLGNKGTLPWKCNSVDMKYFSSVTTYVDESKYEKLKWKRERYLRMEASQGGGDNTSGGDNTHGGDNADKLQ 108 (238)
T ss_dssp CTTCSCSSCEEEBTTBCSSSCCHHHHHHHHHHHHCCCGGGHHHHHHHHHHHHHHHC---------------------CCC
T ss_pred EEEEecCCCeecCCCcCCCcCCHHHHHHHHHHhcccccccccccCCCcceecccccccCCcccccccccccccccccccC
Confidence 5677889999999999999 999999999999985321 1124
Q ss_pred ceEEEeccccccccCCCCCCCCCcEEEEcCcCCCCCCCCCCcEEEeCCHHHHHHHHHhhccCCCCCcEEEEeChhhhccc
Q psy1579 44 NAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLT 123 (258)
Q Consensus 44 naVIMGRKTweSip~~~rPL~~R~nvVlSr~~~~~~~~~~~~v~v~~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~ 123 (258)
++||||||||||+|.++||||+|.|||+||+... ....+++++++|+++|++.|++. ..++||||||++||+
T Consensus 109 ~~VIMGRkTyEsi~~~~~PLp~R~nIVlSr~~~~--~~~~~~v~v~~sl~eal~~lk~~----~~~~I~ViGGa~Iy~-- 180 (238)
T 2bl9_A 109 NVVVMGRSSWESIPKQYKPLPNRINVVLSKTLTK--EDVKEKVFIIDSIDDLLLLLKKL----KYYKCFIIGGAQVYR-- 180 (238)
T ss_dssp EEEEEEHHHHHTSCGGGCSCTTEEEEEECSSCCT--TTCCSSCEEESCHHHHHHHHHTC----CCSCEEEEECHHHHH--
T ss_pred CEEEEchhHhhhhcccccCcCCCEEEEEeCCCcc--ccCCCCEEEECCHHHHHHHHHhC----CCCCEEEECcHHHHH--
Confidence 8999999999999987899999999999998653 12357888999999999999864 367999999999999
Q ss_pred ccccccccCCcccccchhhhcccCCccchhhhhhhHhhhCCCcccEEEEEeecccccccccCCCCC-CCcEEEecCCCCC
Q psy1579 124 EPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLS-DKFQLIKDPNIPD 202 (258)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~~~l~~p~~D~i~lT~I~~~fe~DtfFP~l~-~~f~li~~~~i~~ 202 (258)
++|.+++||+++||+|+..++||+|||.++ ..|++++.+.
T Consensus 181 ------------------------------------~~L~~glvDel~lT~ip~~~gGD~~FP~~d~~~~~lv~~~~--- 221 (238)
T 2bl9_A 181 ------------------------------------ECLSRNLIKQIYFTRINGAYPCDVFFPEFDESEFRVTSVSE--- 221 (238)
T ss_dssp ------------------------------------HHHHTTCCSEEEEEEEEEEECCSEECCCCCGGGEEEEEECC---
T ss_pred ------------------------------------HHhcccCCCEEEEEEeccccCCceeCCCCCchhcEEEEEEe---
Confidence 999889999999999999999999999998 7899987743
Q ss_pred CCcccCCccEEEEEEEEc
Q psy1579 203 DVQKENDLNFQFKVFQKE 220 (258)
Q Consensus 203 ~~~een~~~f~f~~y~r~ 220 (258)
.++++++.|+|.+|+|+
T Consensus 222 -~~~~~~~~~~f~~y~r~ 238 (238)
T 2bl9_A 222 -VYNSKGTTLDFLVYSKV 238 (238)
T ss_dssp -CEEETTEEEEEEEEEEC
T ss_pred -cccCCCccEEEEEEEeC
Confidence 24578999999999985
No 10
>3dfr_A Dihydrofolate reductase; oxido-reductase; HET: NDP MTX; 1.70A {Lactobacillus casei} SCOP: c.71.1.1 PDB: 1ao8_A* 1bzf_A* 1dis_A* 1diu_A* 1lud_A* 2hm9_A* 2hqp_A* 2l28_A 2lf1_A*
Probab=100.00 E-value=1.5e-42 Score=289.19 Aligned_cols=159 Identities=22% Similarity=0.344 Sum_probs=143.6
Q ss_pred eEEEEEeccceeecCCCcccCChhhhhHHHHHHcCCCCCCccceEEEeccccccccCCCCCCCCCcEEEEcCcCCCCCCC
Q psy1579 2 LMITVFLKVQGFFFEACQIFYTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQL 81 (258)
Q Consensus 2 ~~I~a~~~~~giG~~g~lPW~l~~Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip~~~rPL~~R~nvVlSr~~~~~~~~ 81 (258)
.||+|++.+++||.+|+|||++++||+||+++|.+ ++||||||||||+|. +|||+|.|||+||+...
T Consensus 2 ~li~A~s~dg~IG~~g~lpW~~~~D~~~F~~~t~~-------~~viMGRkTyes~~~--~plp~r~~iVlS~~~~~---- 68 (162)
T 3dfr_A 2 AFLWAQNRNGLIGKDGHLPWHLPDDLHYFRAQTVG-------KIMVVGRRTYESFPK--RPLPERTNVVLTHQEDY---- 68 (162)
T ss_dssp EEEEEECTTCEEEBTTBCSSCCHHHHHHHHHTTTT-------SEEEEEHHHHHHSSS--SSCTTSEEEEECSCTTC----
T ss_pred EEEEEECCCCeEeCCCCCCCCcHHHHHHHHHHhcC-------CeEEEecchhhhccc--ccCCCCcEEEEcCCCCC----
Confidence 58999999999999999999999999999999996 899999999999984 79999999999999763
Q ss_pred CCCcEEEeCCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCcccccchhhhcccCCccchhhhhhhHhh
Q psy1579 82 TGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQES 161 (258)
Q Consensus 82 ~~~~v~v~~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~~~ 161 (258)
..+++++++|+++|++.+++. ..++||||||+++|+ ++
T Consensus 69 ~~~~~~~~~~~~~~l~~lk~~----~~~~i~viGG~~l~~--------------------------------------~~ 106 (162)
T 3dfr_A 69 QAQGAVVVHDVAAVFAYAKQH----LDQELVIAGGAQIFT--------------------------------------AF 106 (162)
T ss_dssp CCTTSEEESSHHHHHHHHHHC----CSSCEEECCCHHHHH--------------------------------------HT
T ss_pred CCCCEEEECCHHHHHHHHhcC----CCCCEEEECCHHHHH--------------------------------------HH
Confidence 356788889999999999874 357999999999999 88
Q ss_pred hCCCcccEEEEEeecccccccccCCCCC-CCcEEEecCCCCCCCcccCCccEEEEEEEEc
Q psy1579 162 LNSPYCDKVYVTQIHHHFDCDTFFPSLS-DKFQLIKDPNIPDDVQKENDLNFQFKVFQKE 220 (258)
Q Consensus 162 l~~p~~D~i~lT~I~~~fe~DtfFP~l~-~~f~li~~~~i~~~~~een~~~f~f~~y~r~ 220 (258)
| ++||++++|.|+..++||+|||.++ .+|++++... + .+++|++.|.|.+|+|+
T Consensus 107 l--~l~Del~lT~i~~~~~Gd~~Fp~~~~~~~~l~~~~~-~--~~~~~~~~~~f~~y~r~ 161 (162)
T 3dfr_A 107 K--DDVDTLLVTRLAGSFEGDTKMIPLNWDDFTKVSSRT-V--EDTNPALTHTYEVWQKK 161 (162)
T ss_dssp G--GGCCEEEEEEESSCCCCSEECCCCCGGGEEEEEEEE-E--CCSSGGGCEEEEEEEEC
T ss_pred H--hhCCEEEEEEecccccccCcCCCCChhHcEEEEEEc-c--cccCCCceEEEEEEEEC
Confidence 8 6999999999999999999999998 8899998754 2 34678999999999986
No 11
>3qg2_A Bifunctional dihydrofolate reductase-thymidylate; pyrimethamine, antifolate resistance, oxidoreductase, transferase; HET: CP6 NDP UMP; 2.30A {Plasmodium falciparum} PDB: 3jsu_A* 4dp3_A* 4dph_A* 3qgt_A* 3um8_A* 4dpd_A* 3um5_A* 3um6_A*
Probab=100.00 E-value=1.6e-42 Score=341.55 Aligned_cols=173 Identities=28% Similarity=0.528 Sum_probs=152.6
Q ss_pred eEEEEEeccceeecCCCccc-CChhhhhHHHHHHcCC----------------------------CCCCccceEEEeccc
Q psy1579 2 LMITVFLKVQGFFFEACQIF-YTRKDMAHFSRITKKT----------------------------ENSNRVNAVIMGRKT 52 (258)
Q Consensus 2 ~~I~a~~~~~giG~~g~lPW-~l~~Dm~~F~~iT~~~----------------------------~~~~~~naVIMGRKT 52 (258)
.||+|.++++|||.+|+||| ++|+||+||+++|+++ .++++.++|||||||
T Consensus 29 ~lIvA~~~n~gIG~~g~LPW~~Lp~Dlk~Fk~~T~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~VIMGRKT 108 (608)
T 3qg2_A 29 NEVFNNYTFRGLGNKGVLPWKCISLDMKYFRAVTTYVNESKYEKLKYKRCKYLNKETVDNVNDMPNSKKLQNVVVMGRTN 108 (608)
T ss_dssp CCCCCGGGEEEEEBTTBCSSSCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTCCC----------CCCCEEEEEEHHH
T ss_pred EEEEEeCCCCccccCCcCCCCCCHHHHHHHHHHhcCCCccccccccccccchhhcccccCccccccccCcCCEEEEchHH
Confidence 58999999999999999999 8999999999999932 146778999999999
Q ss_pred cccccCCCCCCCCCcEEEEcCcCCCCCCCCCCcEEEeCCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccC
Q psy1579 53 WDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLST 132 (258)
Q Consensus 53 weSip~~~rPL~~R~nvVlSr~~~~~~~~~~~~v~v~~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~ 132 (258)
|||||.++||||+|.||||||+... ....+++.+++|+++|++.+++. +.++||||||++||+
T Consensus 109 fESIp~~frPLPgR~NIVLSR~~~~--~~~~~gv~V~~sleeal~~lk~~----~~~~IfVIGGa~IY~----------- 171 (608)
T 3qg2_A 109 WESIPKKFKPLSNRINVILSRTLKK--EDFDEDVYIINKVEDLIVLLGKL----NYYKCFILGGSVVYQ----------- 171 (608)
T ss_dssp HHHSCGGGCSCTTEEEEEECSSCCG--GGCCSSCEEESSHHHHHHHHHHS----CCSCEEECCCHHHHH-----------
T ss_pred HHhhccccCCCCCCeEEEECCCCcc--ccCCCCEEEECCHHHHHHHHhcC----CCCeEEEECCHHHHH-----------
Confidence 9999988899999999999998652 12356789999999999999874 357999999999999
Q ss_pred CcccccchhhhcccCCccchhhhhhhHhhhCCCcccEEEEEeecccccccccCCCCC-CCcEEEecCCCCCCCcccCCcc
Q psy1579 133 FPKKKGLILLCTRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLS-DKFQLIKDPNIPDDVQKENDLN 211 (258)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~s~l~~~~~l~~p~~D~i~lT~I~~~fe~DtfFP~l~-~~f~li~~~~i~~~~~een~~~ 211 (258)
++|.+++||+++||+|+..++||+|||.++ +.|++++... .++++++.
T Consensus 172 ---------------------------~~L~~~laDeL~LT~I~~~~eGDtfFP~id~~~w~~~~~~~----~~~~~~~~ 220 (608)
T 3qg2_A 172 ---------------------------EFLEKKLIKKIYFTRINSTYECDVFFPEINENEYQIISVSD----VYTSNNTT 220 (608)
T ss_dssp ---------------------------HHHHTTCCSEEEEEEEEEEECCSEECCCCCTTTEEEEEECC----CEEETTEE
T ss_pred ---------------------------HHcccCCCCEEEEEEeCCccCCCccCCCCChHHcEEEEEee----eeccCCCc
Confidence 999888999999999999999999999998 7899998754 34679999
Q ss_pred EEEEEEEEcCC
Q psy1579 212 FQFKVFQKELA 222 (258)
Q Consensus 212 f~f~~y~r~~~ 222 (258)
|.|.+|+|+..
T Consensus 221 y~F~~y~R~~~ 231 (608)
T 3qg2_A 221 LDFIIYKKTNN 231 (608)
T ss_dssp EEEEEEEECCC
T ss_pred eEEEEEEECCC
Confidence 99999999754
No 12
>3cse_A Dihydrofolate reductase; protein-ligand complex, oxidoreductase; HET: NAP N22; 1.60A {Candida glabrata} PDB: 3eej_A* 3eek_A* 3eel_A* 3eem_A* 3qlx_A* 3qly_A* 3qlz_A*
Probab=100.00 E-value=5.1e-42 Score=300.35 Aligned_cols=181 Identities=31% Similarity=0.517 Sum_probs=153.9
Q ss_pred eEEEEEe-ccceeecCCCcccCChhhhhHHHHHHcCCCCCCccceEEEeccccccccCCCCCCCCCcEEEEcCcCCCCCC
Q psy1579 2 LMITVFL-KVQGFFFEACQIFYTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQ 80 (258)
Q Consensus 2 ~~I~a~~-~~~giG~~g~lPW~l~~Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip~~~rPL~~R~nvVlSr~~~~~~~ 80 (258)
.+|+|++ ++.+||.+|+|||++++||+||+++|++.++++++++||||||||||||.++||||+|.|||+||+......
T Consensus 7 ~livA~Sldg~iiG~~g~lpW~l~~D~~~F~~~t~~~~~~~~~~avIMGRkTyesi~~~wrPlp~r~~iVlSr~~~~~~~ 86 (227)
T 3cse_A 7 VGIVAALLPEMGIGFQGNLPWRLAKEMKYFREVTTLTNDNSKQNVVIMGRKTWESIPQKFRPLPKRINVVVSRSFDGELR 86 (227)
T ss_dssp EEEEEEETTTTEEEBTTBCSCCCHHHHHHHHHHHHCCSSTTCEEEEEEEHHHHHHSCGGGCSCTTSEEEEECTTSSSSCE
T ss_pred EEEEEEcCCCCEECCCCCcCCCChHHHHHHHHHHccCCcccccCEEEECchhhhcccccccCCCcCeEEEEeCCCccccc
Confidence 5788888 999999999999999999999999999987788999999999999999987789999999999998653100
Q ss_pred CCCCcEEEeCCHHHHHHHHHhhc-cCCCCCcEEEEeChhhhcccccccccccCCcccccchhhhcccCCccchhhhhhhH
Q psy1579 81 LTGPNVTTTSSLDQAIDLLRHKK-SKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQ 159 (258)
Q Consensus 81 ~~~~~v~v~~sl~~ai~~l~~~~-~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~ 159 (258)
...+++++++|+++|++.|++.. .....++||||||++||+
T Consensus 87 ~~~~~~~v~~sl~~al~~lk~~~~~~~~~~~I~ViGG~~ly~-------------------------------------- 128 (227)
T 3cse_A 87 KVEDGIYHSNSLRNCLTALQSSLANENKIERIYIIGGGEIYR-------------------------------------- 128 (227)
T ss_dssp EEETTEEEESCHHHHHHHHTCHHHHTTCEEEEEECCCHHHHH--------------------------------------
T ss_pred cCCCCEEEeCCHHHHHHHHHhhhcccCCCCeEEEEcCHHHHH--------------------------------------
Confidence 01356889999999999997630 011357999999999999
Q ss_pred hhhCCCcccEEEEEeeccc----cc-ccccCC-CCC-CCcEEEec----------CCCCCC--------------CcccC
Q psy1579 160 ESLNSPYCDKVYVTQIHHH----FD-CDTFFP-SLS-DKFQLIKD----------PNIPDD--------------VQKEN 208 (258)
Q Consensus 160 ~~l~~p~~D~i~lT~I~~~----fe-~DtfFP-~l~-~~f~li~~----------~~i~~~--------------~~een 208 (258)
++| ++||+++||+|+.. ++ ||+||| .++ ..|++ +. +.+|++ +|+|+
T Consensus 129 ~~L--~lvDel~lT~ip~~lG~G~~~gD~~Fp~~~~~~~w~l-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~ 205 (227)
T 3cse_A 129 QSM--DLADHWLITKIMPLPETTIPQMDTFLQKQELEQRFYD-NSDKLVDFLPSSIQLEGRLTSQEWNGELVKGLPVQEK 205 (227)
T ss_dssp HHT--TTCSEEEEEEEEECTTSCCCCCSEECCHHHHHHHEEE-CGGGHHHHSCTTCCCSSCCEEEEETTEEEEEEEEEET
T ss_pred HHH--HhCCEEEEEEEEccccCCCccccccCCCCCChhhcEe-chhhhhhhcCccccCCccccccccccccccccceeEC
Confidence 898 99999999999998 87 999999 676 78988 42 345666 88999
Q ss_pred CccEEEEEEEEcCCC
Q psy1579 209 DLNFQFKVFQKELAP 223 (258)
Q Consensus 209 ~~~f~f~~y~r~~~~ 223 (258)
|+.|+|++|+|++.-
T Consensus 206 g~~y~f~~~~r~~~~ 220 (227)
T 3cse_A 206 GYQFYFTLYTKKLEH 220 (227)
T ss_dssp TEEEEEEEEEECCCC
T ss_pred CEEEEEEEEEEechh
Confidence 999999999998754
No 13
>1aoe_A DHFR, dihydrofolate reductase; oxidoreductase, antifungal target; HET: NDP GW3; 1.60A {Candida albicans} SCOP: c.71.1.1 PDB: 1ai9_A* 1ia1_A* 1ia2_A* 1ia3_A* 1ia4_A* 1m78_A* 1m79_A* 1m7a_A* 3qlr_A* 3qls_A* 3qlw_A*
Probab=100.00 E-value=1.4e-41 Score=287.67 Aligned_cols=173 Identities=32% Similarity=0.625 Sum_probs=149.7
Q ss_pred eEEEEEe-ccceeecCCCcccCChhhhhHHHHHHcCCCCCCccceEEEeccccccccCCCCCCCCCcEEEEcCcCCCCCC
Q psy1579 2 LMITVFL-KVQGFFFEACQIFYTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQ 80 (258)
Q Consensus 2 ~~I~a~~-~~~giG~~g~lPW~l~~Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip~~~rPL~~R~nvVlSr~~~~~~~ 80 (258)
.+|+|++ .+.+||.+|++||++++||+||+++|.+..++.++++||||||||||+|.++|||++|.|||+||+... .
T Consensus 7 ~~i~A~sldg~iig~~g~lpW~~~~d~~~f~~~t~~~~~~~~~~~viMGRkTyes~~~~~~pl~~r~~iVlS~~~~~--~ 84 (192)
T 1aoe_A 7 AIIVAALKPALGIGYKGKMPWRLRKEIRYFKDVTTRTTKPNTRNAVIMGRKTWESIPQKFRPLPDRLNIILSRSYEN--E 84 (192)
T ss_dssp EEEEEEETTTTEEEBTTBCSCCCHHHHHHHHHHHHCCSSTTCEEEEEEEHHHHHHSCGGGCSCTTSEEEEECTTCCC--E
T ss_pred EEEEEEcCCCCeECCCCCCCCCChhHHHHHHHHhcCCCcccCCCEEEECchHhhcccccccCCCCCeEEEEcCCCcc--c
Confidence 5788888 999999999999999999999999999876778899999999999999977789999999999998642 1
Q ss_pred CCCCcEEEeCCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCcccccchhhhcccCCccchhhhhhhHh
Q psy1579 81 LTGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQE 160 (258)
Q Consensus 81 ~~~~~v~v~~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~~ 160 (258)
...+++.+.+|+++|++. ++ +.++||||||+++|+ +
T Consensus 85 ~~~~~~~v~~~~~~al~~-~~-----~~~~i~ViGG~~l~~--------------------------------------~ 120 (192)
T 1aoe_A 85 IIDDNIIHASSIESSLNL-VS-----DVERVFIIGGAEIYN--------------------------------------E 120 (192)
T ss_dssp EEETTEEEESSHHHHHHT-CC-----SEEEEEECCCHHHHH--------------------------------------H
T ss_pred cCCCCEEEECCHHHHHHh-hc-----CCCeEEEEcCHHHHH--------------------------------------H
Confidence 234578899999999987 42 468999999999999 9
Q ss_pred hhCCCcccEEEEEeeccc----ccccccCCCCCCCcEEEecC--------CCCCCCcccCCccEEEEEEEEc
Q psy1579 161 SLNSPYCDKVYVTQIHHH----FDCDTFFPSLSDKFQLIKDP--------NIPDDVQKENDLNFQFKVFQKE 220 (258)
Q Consensus 161 ~l~~p~~D~i~lT~I~~~----fe~DtfFP~l~~~f~li~~~--------~i~~~~~een~~~f~f~~y~r~ 220 (258)
+|++++||++++|.|+.. ++||+|||...+.|++++.+ .++.+.++++++.|+|.+|+|+
T Consensus 121 ~l~~~lvDel~lt~ip~~lG~G~~gd~~fp~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~f~~y~r~ 192 (192)
T 1aoe_A 121 LINNSLVSHLLITEIEHPSPESIEMDTFLKFPLESWTKQPKSELQKFVGDTVLEDDIKEGDFTYNYTLWTRK 192 (192)
T ss_dssp HTTSTTEEEEEEEEEECSCGGGSCCCEECCCCGGGEEECCHHHHHHHHTTCCCCSSEEETTEEEEEEEEEEC
T ss_pred HhcCCCCCEEEEEEEEcccCCCCccceECCCChHHcEEEeeeccccccccccccccccCCCeeEEEEEEEEC
Confidence 999999999999999999 89999999534789987643 3444567789999999999984
No 14
>3ix9_A Dihydrofolate reductase; central beta sheet surrounded by 4 alpha helices, oxidoreductase; HET: NDP MTX; 1.95A {Streptococcus pneumoniae}
Probab=100.00 E-value=7.5e-41 Score=287.26 Aligned_cols=159 Identities=26% Similarity=0.464 Sum_probs=143.8
Q ss_pred eEEEEEeccceeecCCCcccCChhhhhHHHHHHcCCCCCCccceEEEeccccccccCCCCCCCCCcEEEEcCcCCCCCCC
Q psy1579 2 LMITVFLKVQGFFFEACQIFYTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQL 81 (258)
Q Consensus 2 ~~I~a~~~~~giG~~g~lPW~l~~Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip~~~rPL~~R~nvVlSr~~~~~~~~ 81 (258)
.+|+|++.++.||.+|+|||++++|++||+++|.+ ++||||||||||+|. +|||+|.|||+||+...
T Consensus 26 ~~i~A~s~dG~IG~~g~lpW~~~~D~~~fk~~t~~-------~~vIMGRkTyesi~~--~plp~r~~iVlSr~~~~---- 92 (190)
T 3ix9_A 26 VAIWAQDEEGVIGKDNRLPWYLPAELQHFKETTLN-------HAILMGRVTFDGMGR--RLLPKRETLILTRNPEE---- 92 (190)
T ss_dssp EEEEEECTTCEEEBTTBCSCCCHHHHHHHHHHHTT-------SEEEEEHHHHHHTTT--CCCTTCEEEEECCSCCS----
T ss_pred EEEEEECCCCcEeCCCCcCCCChHHHHHHHHHhcC-------CeEEEcCcchhhcCc--cCCCCCEEEEEcCCCCC----
Confidence 58999999999999999999999999999999997 899999999999984 79999999999999763
Q ss_pred CCCcEEEeCCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCcccccchhhhcccCCccchhhhhhhHhh
Q psy1579 82 TGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQES 161 (258)
Q Consensus 82 ~~~~v~v~~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~~~ 161 (258)
..+++++++|+++|++.+++. .++||||||+++|+ ++
T Consensus 93 ~~~~~~v~~~~~eal~~lk~~-----~~~i~ViGG~~ly~--------------------------------------~~ 129 (190)
T 3ix9_A 93 KIDGVATFHDVQSVLDWYSAQ-----EKNLYIVGGKQIFQ--------------------------------------AF 129 (190)
T ss_dssp CCSSSEEESSHHHHHHHHHTS-----CSCEEEEECHHHHH--------------------------------------HH
T ss_pred CCCCEEEECCHHHHHHHHHhC-----CCCEEEECCHHHHH--------------------------------------HH
Confidence 236788889999999999863 57899999999999 88
Q ss_pred hCCCcccEEEEEeecccccccccCCC-CC-CCcEEEecCCCCCCCcccCCccEEEEEEEEc
Q psy1579 162 LNSPYCDKVYVTQIHHHFDCDTFFPS-LS-DKFQLIKDPNIPDDVQKENDLNFQFKVFQKE 220 (258)
Q Consensus 162 l~~p~~D~i~lT~I~~~fe~DtfFP~-l~-~~f~li~~~~i~~~~~een~~~f~f~~y~r~ 220 (258)
| ++||++++|.|+..++||+|||. ++ .+|++++...++.+ +++++.|.|.+|+|+
T Consensus 130 l--~liDel~lt~ip~~g~Gd~lFp~~~~~~~~~lv~~~~~~~~--~~~~~~~~f~~y~r~ 186 (190)
T 3ix9_A 130 E--PYLDEVIVTHIHARVEGDTYFPAEFDLSLFETVSSKFYTKD--EKNPYDFTIQYRKRK 186 (190)
T ss_dssp G--GGCSEEEEEEESSCCCCSEECCCCCCGGGEEEEEEEEECCB--TTBCSCEEEEEEEEC
T ss_pred H--hhCCEEEEEEeCcccccCCcCCCCCCccccEEEEEEeccCC--CcCCceEEEEEEEEe
Confidence 8 69999999999999999999999 87 78999988665543 678999999999997
No 15
>1j3k_A Bifunctional dihydrofolate reductase-thymidylate synthase; oxidoreductase, transferase; HET: WRA NDP UMP; 2.10A {Plasmodium falciparum} SCOP: c.71.1.1 PDB: 3dg8_A* 1j3j_A* 1j3i_A* 3dga_A*
Probab=100.00 E-value=4.2e-41 Score=305.18 Aligned_cols=172 Identities=28% Similarity=0.545 Sum_probs=146.9
Q ss_pred eEEEEEeccceeecCCCccc-CChhhhhHHHHHHcCCCC---------------------------CCc-cceEEEeccc
Q psy1579 2 LMITVFLKVQGFFFEACQIF-YTRKDMAHFSRITKKTEN---------------------------SNR-VNAVIMGRKT 52 (258)
Q Consensus 2 ~~I~a~~~~~giG~~g~lPW-~l~~Dm~~F~~iT~~~~~---------------------------~~~-~naVIMGRKT 52 (258)
.+|+|++.+++||.+|.||| ++|+||+||+++|++++. ... .++|||||||
T Consensus 29 ~~i~a~~~n~~IG~~g~LPW~~lp~Dmk~Fk~~T~~~~~~~dg~ldWL~~~~~~~~~~~d~gy~~f~~~ig~~VIMGRkT 108 (280)
T 1j3k_A 29 NEVFNNYTFRGLGNKGVLPWKCISLDMKYFRAVTTYVNESKYEKLKYKRCKYLNKETVDNVNDMPNSKKLQNVVVMGRTN 108 (280)
T ss_dssp GCCCCGGGEEEEEBTTBCSSSCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTCCC----------CCCCCEEEEEHHH
T ss_pred EEEEEecCCceeccCCcCCCcCCHHHHHHHHHHhcCCCccccCcccccccccccccccccccchhhccccCCEEEEcchH
Confidence 35777889999999999999 999999999999985321 012 3899999999
Q ss_pred cccccCCCCCCCCCcEEEEcCcCCCCCCCCCCcEEEeCCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccC
Q psy1579 53 WDSIPEKFRPLPGRYNVVLTRNSDLGSQLTGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLST 132 (258)
Q Consensus 53 weSip~~~rPL~~R~nvVlSr~~~~~~~~~~~~v~v~~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~ 132 (258)
|||+|.++||||+|.|||+||+... ....+++++++|+++|++.|++. ..++||||||++||+
T Consensus 109 yEsip~~~~PLp~R~nIVlSr~~~~--~~~~~~v~vv~sl~eal~~lk~~----~~~~I~ViGGa~ly~----------- 171 (280)
T 1j3k_A 109 WESIPKKFKPLSNRINVILSRTLKK--EDFDEDVYIINKVEDLIVLLGKL----NYYKCFILGGSVVYQ----------- 171 (280)
T ss_dssp HHHSCGGGCSCTTSEEEEECSSCCG--GGCCSSCEEESSHHHHHHHHHHS----CCSCEEECCCHHHHH-----------
T ss_pred hhhhcccccCcCCCeEEEEeCCCcc--ccCCCCEEEECCHHHHHHHHHhC----CCCcEEEECCHHHHH-----------
Confidence 9999977899999999999998642 12356788889999999999864 367999999999999
Q ss_pred CcccccchhhhcccCCccchhhhhhhHhhhCCCcccEEEEEeecccccccccCCCCC-CCcEEEecCCCCCCCcccCCcc
Q psy1579 133 FPKKKGLILLCTRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLS-DKFQLIKDPNIPDDVQKENDLN 211 (258)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~s~l~~~~~l~~p~~D~i~lT~I~~~fe~DtfFP~l~-~~f~li~~~~i~~~~~een~~~ 211 (258)
++|.+++||+++||+|+..++||+|||.++ ..|+++..... .+++++.
T Consensus 172 ---------------------------~~L~~glvDel~LT~Ip~~lgGD~~FP~~d~~~~~lv~~~~~----~~~~g~~ 220 (280)
T 1j3k_A 172 ---------------------------EFLEKKLIKKIYFTRINSTYECDVFFPEINENEYQIISVSDV----YTSNNTT 220 (280)
T ss_dssp ---------------------------HHHHTTCCSEEEEEEEEEEECCSEECCCCCTTTEEEEEECCC----EEETTEE
T ss_pred ---------------------------HHhcCccCCEEEEEEeccccCCceeCCCCChhhcEEEEEEee----ccCCCce
Confidence 999889999999999999999999999987 78999876432 2458899
Q ss_pred EEEEEEEEcC
Q psy1579 212 FQFKVFQKEL 221 (258)
Q Consensus 212 f~f~~y~r~~ 221 (258)
|.|.+|+|+.
T Consensus 221 ~~f~~Y~R~~ 230 (280)
T 1j3k_A 221 LDFIIYKKTN 230 (280)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEEEECC
Confidence 9999999974
No 16
>1zdr_A Dihydrofolate reductase; DHFR, NADP, oxidoreductase; 2.00A {Geobacillus stearothermophilus}
Probab=100.00 E-value=9.4e-40 Score=269.56 Aligned_cols=158 Identities=28% Similarity=0.541 Sum_probs=141.5
Q ss_pred eEEEEEeccceeecCCCcccCChhhhhHHHHHHcCCCCCCccceEEEeccccccccCCCCCCCCCcEEEEcCcCCCCCCC
Q psy1579 2 LMITVFLKVQGFFFEACQIFYTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQL 81 (258)
Q Consensus 2 ~~I~a~~~~~giG~~g~lPW~l~~Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip~~~rPL~~R~nvVlSr~~~~~~~~ 81 (258)
.+|+|++.++.||.+|++||++|+||+||+++|.+ ++||||||||||+| ||||+|.|||+||+...
T Consensus 3 ~~~~A~s~dG~Ig~~g~l~W~~~~d~~~f~~~t~~-------~~vimGRkTyes~~---~pl~~r~~iV~S~~~~~---- 68 (164)
T 1zdr_A 3 SHIVAMDENRVIGKDNRLPWHLPADLAYFKRVTMG-------HAIVMGRKTFEAIG---RPLPGRDNVVVTGNRSF---- 68 (164)
T ss_dssp EEEEEEETTCEEEBTTBCSSCCHHHHHHHHHHHTT-------SEEEEEHHHHHHHC---SCCTTSEEEEECSCTTC----
T ss_pred EEEEEEcCCCeEeCCCCcccCCHHHHHHHHHHhcC-------CEEEECCcHHhcCC---CCCCCCeEEEEcCCCCc----
Confidence 68999999999999999999999999999999986 89999999999998 79999999999998653
Q ss_pred CCCcEEEeCCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCcccccchhhhcccCCccchhhhhhhHhh
Q psy1579 82 TGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQES 161 (258)
Q Consensus 82 ~~~~v~v~~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~~~ 161 (258)
..+++++++|+++|++.+++ +.++|||+||+++|+ ++
T Consensus 69 ~~~~~~~~~~~~~~l~~l~~-----~~~~i~viGG~~l~~--------------------------------------~~ 105 (164)
T 1zdr_A 69 RPEGCLVLHSLEEVKQWIAS-----RADEVFIIGGAELFR--------------------------------------AT 105 (164)
T ss_dssp CCTTCEEECSHHHHHHHHHT-----CCSCEEEEECHHHHH--------------------------------------HH
T ss_pred CCCCeEEECCHHHHHHHHhc-----CCCeEEEECcHHHHH--------------------------------------HH
Confidence 34678888899999999975 257899999999999 88
Q ss_pred hCCCcccEEEEEeecccccccccCCCCC-CCcEEEecCCCCCCCcccCCccEEEEEEEEc
Q psy1579 162 LNSPYCDKVYVTQIHHHFDCDTFFPSLS-DKFQLIKDPNIPDDVQKENDLNFQFKVFQKE 220 (258)
Q Consensus 162 l~~p~~D~i~lT~I~~~fe~DtfFP~l~-~~f~li~~~~i~~~~~een~~~f~f~~y~r~ 220 (258)
| ++||++++|.||..++||+|||.++ ..|++++...++. ++++++.|.|.+|+|+
T Consensus 106 l--~lvDel~lt~ip~~~~G~~~Fp~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~Y~r~ 161 (164)
T 1zdr_A 106 M--PIVDRLYVTKIFASFPGDTFYPPISDDEWEIVSYTPGGK--DEKNPYEHAFIIYERK 161 (164)
T ss_dssp G--GGCCEEEEEEESSCCCCSEECCCCCTTTEEEEEEEECCC--SSSSCSCEEEEEEEEC
T ss_pred H--HhCCEEEEEEeccccCCcEECCCCChhHcEEEEEEeccc--ccCCCceEEEEEEEEc
Confidence 8 4999999999999999999999987 7899988765542 4678888999999997
No 17
>3nrr_A Dihydrofolate reductase-thymidylate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, niaid, DHFR; HET: NAP D16 UMP; 1.80A {Babesia bovis} PDB: 3kjr_A* 3i3r_A* 3k2h_A*
Probab=100.00 E-value=3.1e-40 Score=320.19 Aligned_cols=171 Identities=26% Similarity=0.467 Sum_probs=153.8
Q ss_pred eEEEEEeccceeecCCCcccC-ChhhhhHHHHHHcC------CCCCCccceEEEeccccccccCCCCCCCCCcEEEEcCc
Q psy1579 2 LMITVFLKVQGFFFEACQIFY-TRKDMAHFSRITKK------TENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRN 74 (258)
Q Consensus 2 ~~I~a~~~~~giG~~g~lPW~-l~~Dm~~F~~iT~~------~~~~~~~naVIMGRKTweSip~~~rPL~~R~nvVlSr~ 74 (258)
.+|+|++.+++||.+|+|||+ +++||+||+++|++ ++.++++++||||||||||||.++||||+|.|||+||+
T Consensus 16 ~livA~SldG~IG~dg~LpW~~lp~Dlk~Fk~~T~g~p~~~~~~~~~~i~aVIMGRKTyESip~~~rPLp~R~nIVlSrt 95 (515)
T 3nrr_A 16 TIFVAVALNKVIGHKNQIPWPHITHDFRFLRNGTTYIPPEVLSKNPDIQNVVIFGRKTYESIPKASLPLKNRINVILSRT 95 (515)
T ss_dssp EEEEEECTTSEEEBTTBCSSCCCHHHHHHHHHHHHCCCHHHHHHSTTCCEEEEEEHHHHHTSCGGGCSCTTEEEEEECSS
T ss_pred EEEEEECCCCcCCCCCCCCCcCCchHHHHHHHHHcCCCccccccccccCCEEEEcchHHHhhhhccCCCCCCeEEEECCC
Confidence 589999999999999999999 99999999999998 44678899999999999999987799999999999998
Q ss_pred CCCCCCCCCCcEEEeCCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCcccccchhhhcccCCccchhh
Q psy1579 75 SDLGSQLTGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFS 154 (258)
Q Consensus 75 ~~~~~~~~~~~v~v~~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 154 (258)
... .+++++++|+++|++.|++.. ..++||||||++||+
T Consensus 96 ~~~-----~~~v~V~~sl~eal~~Lk~~~---~~~~I~VIGGg~Iy~--------------------------------- 134 (515)
T 3nrr_A 96 VKE-----VPGCLVYEDLSTAIRDLRANV---PHNKIFILGGSFLYK--------------------------------- 134 (515)
T ss_dssp CCC-----CTTEEEESSHHHHHHHHHHHS---CCSCEEECCCHHHHH---------------------------------
T ss_pred CCC-----CCCEEEECCHHHHHHHHhhcc---CCCCEEEECCHHHHH---------------------------------
Confidence 752 467999999999999998741 368999999999999
Q ss_pred hhhhHhhhCCCcccEEEEEeecccccccccCCCCCCCcEEEecCCCCCCCcccCCccEEEEEEEEcCC
Q psy1579 155 VLSLQESLNSPYCDKVYVTQIHHHFDCDTFFPSLSDKFQLIKDPNIPDDVQKENDLNFQFKVFQKELA 222 (258)
Q Consensus 155 ~l~~~~~l~~p~~D~i~lT~I~~~fe~DtfFP~l~~~f~li~~~~i~~~~~een~~~f~f~~y~r~~~ 222 (258)
++|++++||+++||+|+..++||+|||.+.++|++++.+.. ++++++.|+|.+|+|+..
T Consensus 135 -----~~L~~~liDel~LT~I~~~~~GDtfFP~~~~~w~~v~~~~~----~~~~~~~y~F~~y~R~~~ 193 (515)
T 3nrr_A 135 -----EVLDNGLCDKIYLTRLNKEYPGDTYFPDIPDTFEITAISPT----FSTDFVSYDFVIYERKDC 193 (515)
T ss_dssp -----HHHHTTCEEEEEEEEESSCCCCSEECCCCCTTEEEEEECCC----EECSSCEEEEEEEEECC-
T ss_pred -----HHhhCCCCCEEEEEEecCccCCCccCCCchhhCEEEEEecc----cccCCCceEEEEEEEccc
Confidence 99999999999999999999999999999778999986432 367999999999999853
No 18
>2w3w_A Dihydrofolate reductase; nonclassical antifolates, one-carbon metabolism, lipophilic antifolates, NADP, oxidoreductase; HET: VG9 NDP; 1.60A {Mycobacterium avium} PDB: 2w3v_A*
Probab=100.00 E-value=1.1e-39 Score=271.77 Aligned_cols=158 Identities=28% Similarity=0.488 Sum_probs=137.1
Q ss_pred eEEEEEeccceeecCCCcccCChhhhhHHHHHHcCCCCCCccceEEEeccccccccCCCCCCCCCcEEEEcCcCCCCCCC
Q psy1579 2 LMITVFLKVQGFFFEACQIFYTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQL 81 (258)
Q Consensus 2 ~~I~a~~~~~giG~~g~lPW~l~~Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip~~~rPL~~R~nvVlSr~~~~~~~~ 81 (258)
.+|+|++.++.||.+|++||++++|++||++.|.+ ++||||||||||+|.++||||+|.|||+||+...
T Consensus 7 ~~i~A~s~dG~Ig~~g~lpW~~~~d~~~f~~~t~~-------~~viMGRkTyes~~~~~~pl~~r~~iV~S~~~~~---- 75 (167)
T 2w3w_A 7 GLVWAQSTSGVIGRGGDIPWSVPEDLTRFKEVTMG-------HTVIMGRRTWESLPAKVRPLPGRRNVVVSRRPDF---- 75 (167)
T ss_dssp EEEEEEETTSEEEBTTBCSCCCHHHHHHHHHHHTT-------SEEEEEHHHHHHSCGGGSSCTTSEEEEECSCTTC----
T ss_pred EEEEEECCCCcCcCCCCcCccchHHHHHHHHHhcC-------CeEEEcchHhhhcCccccCCCCCeEEEEeCCCCC----
Confidence 68999999999999999999999999999999986 7999999999999987799999999999998653
Q ss_pred CCCcEEEeCCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCcccccchhhhcccCCccchhhhhhhHhh
Q psy1579 82 TGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQES 161 (258)
Q Consensus 82 ~~~~v~v~~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~~~ 161 (258)
..+++++++|+++|++ +++ +.++|||+||+++|+ ++
T Consensus 76 ~~~~~~~~~~~~~~l~-l~~-----~~~~i~ViGG~~l~~--------------------------------------~~ 111 (167)
T 2w3w_A 76 VAEGARVAGSLEAALA-YAG-----SDPAPWVIGGAQIYL--------------------------------------LA 111 (167)
T ss_dssp CCTTSEEESSHHHHHH-HTT-----TCSSCEEEECHHHHH--------------------------------------HH
T ss_pred CCCCEEEECCHHHHHH-hhc-----CCCeEEEEchHHHHH--------------------------------------HH
Confidence 3567888899999994 432 468899999999999 88
Q ss_pred hCCCcccEEEEEeecccc---cccccCCCCCCCcEEEecCCCCCCCcccCCccEEEEEEEEc
Q psy1579 162 LNSPYCDKVYVTQIHHHF---DCDTFFPSLSDKFQLIKDPNIPDDVQKENDLNFQFKVFQKE 220 (258)
Q Consensus 162 l~~p~~D~i~lT~I~~~f---e~DtfFP~l~~~f~li~~~~i~~~~~een~~~f~f~~y~r~ 220 (258)
|+ +||++++|.||..+ +||+|||.++..|++ ..+. ..++|++++|+|.+|+|+
T Consensus 112 l~--lvDel~lt~ip~~~G~~~Gd~~Fp~~~~~~~l-~~~~---~~~~~~~~~~~f~~y~r~ 167 (167)
T 2w3w_A 112 LP--HATRCEVTEIEIDLRRDDDDALAPALDDSWVG-ETGE---WLASRSGLRYRFHSYRRD 167 (167)
T ss_dssp GG--GCSEEEEEEEECCCCCCTTSEECCCCCTTCEE-EECC---CEECTTSCEEEEEEEEC-
T ss_pred HH--HCCEEEEEEEEeecCCCCccEeCCCCCcccEE-eecc---ccccCCCCcEEEEEEEeC
Confidence 84 99999999999999 999999998845999 4322 124566799999999884
No 19
>2w9h_A DHFR, dihydrofolate reductase; oxidoreductase, one-carbon metabolism; HET: TOP; 1.48A {Staphylococcus aureus} PDB: 2w9g_A* 3sqy_X* 3srq_X* 3srr_X* 3srs_X* 3sru_X* 3srw_X* 3frd_X* 3fre_X* 3frf_X* 3fyv_X* 3fyw_X* 3sr5_X* 3frb_X* 3fra_X* 3fy8_X* 3fy9_X* 3fq0_A* 3f0b_X* 3f0s_X* ...
Probab=100.00 E-value=8.9e-40 Score=269.00 Aligned_cols=154 Identities=25% Similarity=0.478 Sum_probs=137.4
Q ss_pred eEEEEEeccceeecCCCcccCChhhhhHHHHHHcCCCCCCccceEEEeccccccccCCCCCCCCCcEEEEcCcCCCCCCC
Q psy1579 2 LMITVFLKVQGFFFEACQIFYTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQL 81 (258)
Q Consensus 2 ~~I~a~~~~~giG~~g~lPW~l~~Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip~~~rPL~~R~nvVlSr~~~~~~~~ 81 (258)
.+|+|++.++.||.+|++||++++|++||++.|.+ ++||||||||||+| ||||+|.|||+||+...
T Consensus 4 ~~~~A~s~dG~Ig~~g~lpW~~~~d~~~f~~~t~~-------~~viMGRkTyes~~---~pl~~r~~iV~S~~~~~---- 69 (159)
T 2w9h_A 4 SILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTG-------HTLVMGRKTFESIG---KPLPNRRNVVLTSDTSF---- 69 (159)
T ss_dssp EEEEEECTTCEEEBTTBCSSCCHHHHHHHHHHHTT-------SEEEEEHHHHHHHC---SCCTTSEEEEECSCTTC----
T ss_pred EEEEEECCCCeEcCCCccCccchHHHHHHHHHhcC-------CEEEECCChhhccc---ccCCCCEEEEEcCCCCc----
Confidence 68999999999999999999999999999999986 89999999999998 79999999999998653
Q ss_pred CCCcEEEeCCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCcccccchhhhcccCCccchhhhhhhHhh
Q psy1579 82 TGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQES 161 (258)
Q Consensus 82 ~~~~v~v~~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~~~ 161 (258)
..+++.+++|+++|++. .++|||+||+++|+ ++
T Consensus 70 ~~~~~~~~~~~~~~l~~---------~~~i~viGG~~l~~--------------------------------------~~ 102 (159)
T 2w9h_A 70 NVEGVDVIHSIEDIYQL---------PGHVFIFGGQTLFE--------------------------------------EM 102 (159)
T ss_dssp CCTTCEEECSGGGGGGS---------CSCEEEEECHHHHH--------------------------------------HH
T ss_pred CCCCeEEECCHHHHHhc---------CCcEEEEChHHHHH--------------------------------------HH
Confidence 34578888899998864 36899999999999 89
Q ss_pred hCCCcccEEEEEeecccccccccCCCCC-CCcEEEecCCCCCCCcccCCccEEEEEEEEc
Q psy1579 162 LNSPYCDKVYVTQIHHHFDCDTFFPSLS-DKFQLIKDPNIPDDVQKENDLNFQFKVFQKE 220 (258)
Q Consensus 162 l~~p~~D~i~lT~I~~~fe~DtfFP~l~-~~f~li~~~~i~~~~~een~~~f~f~~y~r~ 220 (258)
| ++||++++|.||..++||+|||.++ ..|++++.+.++. ++++++.|.|.+|+|+
T Consensus 103 l--~lvDel~lt~ip~~~~Gd~~Fp~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~Y~r~ 158 (159)
T 2w9h_A 103 I--DKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKL--DEKNTIPHTFLHLIRK 158 (159)
T ss_dssp T--TTCSEEEEEEECSCCCCSEECCCCCTTTEEEEEEEECCC--BTTBCSCEEEEEEEEC
T ss_pred H--HhCCEEEEEEecccccCCeeCCCCChhHcEEEEEEeccc--cccCCccEEEEEEEEC
Confidence 8 5999999999999999999999987 7899998765543 4568888999999986
No 20
>1df7_A DHFR, dihydrofolate reductase; structure-based inhibitor design, folateanalogs, rossmann fold; HET: NDP MTX; 1.70A {Mycobacterium tuberculosis} SCOP: c.71.1.1 PDB: 1dg5_A* 1dg7_A* 1dg8_A* 2cig_A*
Probab=100.00 E-value=1.2e-39 Score=270.05 Aligned_cols=154 Identities=29% Similarity=0.507 Sum_probs=135.9
Q ss_pred eEEEEEeccceeecCCCcccCChhhhhHHHHHHcCCCCCCccceEEEeccccccccCCCCCCCCCcEEEEcCcCCCCCCC
Q psy1579 2 LMITVFLKVQGFFFEACQIFYTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQL 81 (258)
Q Consensus 2 ~~I~a~~~~~giG~~g~lPW~l~~Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip~~~rPL~~R~nvVlSr~~~~~~~~ 81 (258)
.+|+|++.++.||.+|++||++++|++||++.|.+ ++||||||||||+|.++||||+|.|||+||+...
T Consensus 3 ~~i~A~s~dG~Ig~~g~lpW~~~~d~~~f~~~t~~-------~~viMGRkTyes~~~~~~pl~~r~~iVlS~~~~~---- 71 (159)
T 1df7_A 3 GLIWAQATSGVIGRGGDIPWRLPEDQAHFREITMG-------HTIVMGRRTWDSLPAKVRPLPGRRNVVLSRQADF---- 71 (159)
T ss_dssp EEEEEEETTSEEEBTTBCSSCCHHHHHHHHHHHTT-------SEEEEEHHHHHHSCGGGSSCTTSEEEEECSSTTC----
T ss_pred EEEEEECCCCcEeCCCCcCCCChHHHHHHHHHHCC-------CEEEEeChHHhhcccccCCCCcCEEEEEeCCCCc----
Confidence 68999999999999999999999999999999987 6999999999999987899999999999998652
Q ss_pred CCCcEEEeCCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCcccccchhhhcccCCccchhhhhhhHhh
Q psy1579 82 TGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQES 161 (258)
Q Consensus 82 ~~~~v~v~~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~~~ 161 (258)
..+++++++|+++|++ .++|||+||+++|+ ++
T Consensus 72 ~~~~~~~~~~~~~~l~----------~~~i~viGG~~l~~--------------------------------------~~ 103 (159)
T 1df7_A 72 MASGAEVVGSLEEALT----------SPETWVIGGGQVYA--------------------------------------LA 103 (159)
T ss_dssp CCTTSEEESSHHHHTT----------SSSEEECCCHHHHH--------------------------------------HH
T ss_pred CCCCEEEECCHHHHhc----------CCcEEEECcHHHHH--------------------------------------HH
Confidence 3467888889999986 36799999999999 88
Q ss_pred hCCCcccEEEEEeecccc---cccccCCCCCCCcEEEecCCCCCCCcccCCccEEEEEEEEc
Q psy1579 162 LNSPYCDKVYVTQIHHHF---DCDTFFPSLSDKFQLIKDPNIPDDVQKENDLNFQFKVFQKE 220 (258)
Q Consensus 162 l~~p~~D~i~lT~I~~~f---e~DtfFP~l~~~f~li~~~~i~~~~~een~~~f~f~~y~r~ 220 (258)
|+ +||++++|.||..+ +||+|||.++..| +++.+.. .++|++++|+|.+|+|+
T Consensus 104 l~--lvDel~lt~ip~~~G~~~Gd~~Fp~~~~~~-~~~~~~~---~~~~~~~~~~f~~y~r~ 159 (159)
T 1df7_A 104 LP--YATRCEVTEVDIGLPREAGDALAPVLDETW-RGETGEW---RFSRSGLRYRLYSYHRS 159 (159)
T ss_dssp GG--GCSEEEEEEECCCCCCCTTCEECCCCCTTC-EEEECCC---EECTTSCEEEEEEEECC
T ss_pred HH--HCCEEEEEEEeeecCCCCccEeCCCCCccc-EEeeccc---cccCCCCcEEEEEEEeC
Confidence 84 99999999999999 9999999998559 8776432 24466699999999884
No 21
>1vdr_A DHFR, dihydrofolate reductase; oxidoreductase, halophilic enzyme; 2.55A {Haloferax volcanii} SCOP: c.71.1.1 PDB: 2ith_A 2jyb_A
Probab=100.00 E-value=2.1e-38 Score=260.10 Aligned_cols=153 Identities=18% Similarity=0.412 Sum_probs=135.8
Q ss_pred eEEEEEeccceeecCCCccc-CChhhhhHHHHHHcCCCCCCccceEEEeccccccccCCCCCCCCCcEEEEcCcCCCCCC
Q psy1579 2 LMITVFLKVQGFFFEACQIF-YTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQ 80 (258)
Q Consensus 2 ~~I~a~~~~~giG~~g~lPW-~l~~Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip~~~rPL~~R~nvVlSr~~~~~~~ 80 (258)
.+|+|++.++.||.+|++|| ++++||+||+++|.+ ++||||||||||+| ||||+|.|||+||+...
T Consensus 4 ~~~~A~s~dG~Ig~~g~l~W~~~~~d~~~f~~~t~~-------~~vimGRkTyes~~---~pl~~r~~iV~S~~~~~--- 70 (162)
T 1vdr_A 4 VSVAALAENRVIGRDGELPWPSIPADKKQYRSRIAD-------DPVVLGRTTFESMR---DDLPGSAQIVMSRSERS--- 70 (162)
T ss_dssp EEEEEEEETSEEEBTTBCSSCCCHHHHHHHHHHTSS-------SCEEEEHHHHHHTT---TSCCSSSEEEECSSCCC---
T ss_pred EEEEEEcCCCcEECCCCccccCChHHHHHHHHhhCC-------CEEEEcchHHhhCC---ccCCcCeEEEEcCCCcc---
Confidence 57999999999999999999 999999999999986 89999999999998 79999999999998651
Q ss_pred CCCCcEEEeCCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCcccccchhhhcccCCccchhhhhhhHh
Q psy1579 81 LTGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQE 160 (258)
Q Consensus 81 ~~~~~v~v~~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~~ 160 (258)
...+++++++|+++|++.+++. +.++|||+||+++|+ +
T Consensus 71 ~~~~~~~~~~~~~~~l~~l~~~----~~~~i~viGG~~l~~--------------------------------------~ 108 (162)
T 1vdr_A 71 FSVDTAHRAASVEEAVDIAASL----DAETAYVIGGAAIYA--------------------------------------L 108 (162)
T ss_dssp CCSSSCCEESSHHHHHHHHHHT----TCSCEEEEECHHHHH--------------------------------------H
T ss_pred cCCCCEEEECCHHHHHHHHHhC----CCCcEEEECCHHHHH--------------------------------------H
Confidence 2356788888999999999864 468999999999999 8
Q ss_pred hhCCCcccEEEEEeecccccccccCCCCC-CCcEEEecCCCCCCCcccCCccEEEEEEEEc
Q psy1579 161 SLNSPYCDKVYVTQIHHHFDCDTFFPSLS-DKFQLIKDPNIPDDVQKENDLNFQFKVFQKE 220 (258)
Q Consensus 161 ~l~~p~~D~i~lT~I~~~fe~DtfFP~l~-~~f~li~~~~i~~~~~een~~~f~f~~y~r~ 220 (258)
+| ++||++++|.||..++||+|||.++ ..|++++.+..+ .|.|.+|+|+
T Consensus 109 ~l--~lvDel~lt~ip~~~~G~~~Fp~~~~~~~~l~~~~~~~---------~~~~~~Y~~~ 158 (162)
T 1vdr_A 109 FQ--PHLDRMVLSRVPGEYEGDTYYPEWDAAEWELDAETDHE---------GFTLQEWVRS 158 (162)
T ss_dssp HG--GGCSEEEEEEEEEECCCSEECCCCCTTTEEEEEEEECS---------SCEEEEEEEC
T ss_pred HH--HhCCEEEEEEEccccccCEECCCCCchHCEEEEEecCC---------CEEEEEEEEC
Confidence 88 4899999999999999999999987 789998764321 5899999986
No 22
>3hj3_A Chain A, crystal structure of DHFR; TS, enzyme, crossover, non-active site, oxidoreductase; HET: UMP CB3 MTX NDP; 2.70A {Cryptosporidium hominis} PDB: 1qzf_A* 1sej_A* 3dl5_A* 3dl6_A* 2oip_A*
Probab=100.00 E-value=6.8e-39 Score=311.16 Aligned_cols=169 Identities=31% Similarity=0.592 Sum_probs=150.9
Q ss_pred eEEEEEeccceeecCCCcccCChhhhhHHHHHHcCCCCCCccceEEEeccccccccCCCCCCCCCcEEEEcCcCCCCCCC
Q psy1579 2 LMITVFLKVQGFFFEACQIFYTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQL 81 (258)
Q Consensus 2 ~~I~a~~~~~giG~~g~lPW~l~~Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip~~~rPL~~R~nvVlSr~~~~~~~~ 81 (258)
.+|+|++.+++||.+|+|||++|+||+||+++|++.++++++++||||||||||++ +||||+|.|||+||+... ..
T Consensus 8 ~lIvA~SldG~IG~dg~LpW~lpeDl~~Fk~~T~g~~~~~k~daVIMGRKTyEsig--~~PLp~R~nIVlSrt~~~--~~ 83 (521)
T 3hj3_A 8 IVVAASVLSSGIGINGQLPWSISEDLKFFSKITNNKCDSNKKNALIMGRKTWDSIG--RRPLKNRIIVVISSSLPQ--DE 83 (521)
T ss_dssp EEEEEETTTCEEEBTTBCSCCCHHHHHHHHHHHHCCSSTTSEEEEEEEHHHHGGGT--TCCCTTSEEEEECSSSCC--CC
T ss_pred EEEEEECCCCcEECCCCCCCCCHHHHHHHHHHHcCCCccccCCEEEEcccHHhhcC--cccCCCCeEEEEcCCCcc--cC
Confidence 68999999999999999999999999999999999888999999999999999994 689999999999999763 12
Q ss_pred CCCcEEEeCCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCcccccchhhhcccCCccchhhhhhhHhh
Q psy1579 82 TGPNVTTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQES 161 (258)
Q Consensus 82 ~~~~v~v~~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~~~ 161 (258)
..+++.+++|+++|++.+++.. +.++||||||++||+ ++
T Consensus 84 ~~~~~~V~~sl~eal~~lk~~~---g~~~I~VIGGa~ly~--------------------------------------~~ 122 (521)
T 3hj3_A 84 ADPNVVVFRNLEDSIENLMNDD---SIENIFVCGGESIYR--------------------------------------DA 122 (521)
T ss_dssp SCSSEEEESSTTTTTTSSSSCT---TEEEEEEEECHHHHH--------------------------------------HH
T ss_pred CCCCEEEECCHHHHHHHHhhcc---CCCCEEEEeCHHHHH--------------------------------------HH
Confidence 3567899999999999887531 237899999999999 99
Q ss_pred hCCCcccEEEEEeecc-cccccccCCCCCCCcEEEecCCCCCCCcccCCccEEEEEEEE
Q psy1579 162 LNSPYCDKVYVTQIHH-HFDCDTFFPSLSDKFQLIKDPNIPDDVQKENDLNFQFKVFQK 219 (258)
Q Consensus 162 l~~p~~D~i~lT~I~~-~fe~DtfFP~l~~~f~li~~~~i~~~~~een~~~f~f~~y~r 219 (258)
|++++||++++|+|+. .++||+|||.++..|++++.+. .++++++.|+|.+|+|
T Consensus 123 L~~~liDel~LT~Ipv~~~~GDtfFP~~d~~w~lv~~~~----~~~~~~~~y~F~~y~R 177 (521)
T 3hj3_A 123 LKDNFVDRIYLTRVALEDIEFDTYFPEIPETFLPVYMSQ----TFCTKNISYDFMIFEK 177 (521)
T ss_dssp HHTTCCSEEEEEEECCCSSCCSEECCCCCTTEEEEEECC----CEEETTEEECCEEEEE
T ss_pred hcCCCCCEEEEEEEeccCcCcCccCCCCCCCcEEEEeec----ccccCCCceEEEEEEe
Confidence 9999999999999999 8999999999984499988643 2457999999999999
No 23
>1juv_A DHFR, dihydrofolate reductase; complexed with NADPH, oxidoreductase; HET: NDP; 1.70A {Enterobacteria phage T4} SCOP: c.71.1.1
Probab=100.00 E-value=3e-34 Score=244.92 Aligned_cols=130 Identities=25% Similarity=0.383 Sum_probs=107.1
Q ss_pred eEEEEEec--------cceeecCCCccc-CChhhhhHHHHHHcCCCCCCccceEEEeccccccccCCCCCCCCCcEEEEc
Q psy1579 2 LMITVFLK--------VQGFFFEACQIF-YTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLT 72 (258)
Q Consensus 2 ~~I~a~~~--------~~giG~~g~lPW-~l~~Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip~~~rPL~~R~nvVlS 72 (258)
.+|+|++. +++||.+|+||| ++++||+||+++|.+ ++||||||||||+| +|||+|.|||+|
T Consensus 3 ~li~A~s~~~~~~~~~dg~IG~~g~lpW~~l~~D~~~F~~~t~~-------~~vIMGRkTyesi~---~plp~R~~iVlS 72 (193)
T 1juv_A 3 KLVFRYSPTKTVDGFNELAFGLGDGLPWGRVKKDLQNFKARTEG-------TIMIMGAKTFQSLP---TLLPGRSHIVVC 72 (193)
T ss_dssp EEEEEEEEEECTTSCEEEEEEBTTBCTTCCCHHHHHHHHHHHTT-------SEEEEEHHHHHTCS---SCCTTSCEEEEC
T ss_pred EEEEEEcCccccCCCcCCeECCCCCCCCcCChHHHHHHHHHhcC-------CEEEEchhHhhhcc---cccCCCcEEEEc
Confidence 68999999 999999999999 999999999999997 79999999999998 599999999999
Q ss_pred CcCCCCCC-CCCCcE-----------------EEeCCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCc
Q psy1579 73 RNSDLGSQ-LTGPNV-----------------TTTSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFP 134 (258)
Q Consensus 73 r~~~~~~~-~~~~~v-----------------~v~~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~ 134 (258)
|+...... ...+++ .+.+|+++|++.|++ ..++||||||+++|+
T Consensus 73 r~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~v~~sl~eal~~lk~-----~~~~I~ViGG~~ly~------------- 134 (193)
T 1juv_A 73 DLARDYPVTKDGDLAHFYITWEQYITYISGGEIQVSSPNAPFETMLD-----QNSKVSVIGGPALLY------------- 134 (193)
T ss_dssp CTTSCCCCCTTCCCCSEEECHHHHHHHHTTCCEEEECTTSSCEEEEC-----TTSCEEEEECHHHHH-------------
T ss_pred CCCcccccccccccceeecccccccccccccceecCCHHHHHHHHHc-----CCCcEEEECcHHHHH-------------
Confidence 97532100 112223 345555555554432 458899999999999
Q ss_pred ccccchhhhcccCCccchhhhhhhHhhhCCCcccEEEEEeec--ccccccccCC
Q psy1579 135 KKKGLILLCTRKSNASFMFSVLSLQESLNSPYCDKVYVTQIH--HHFDCDTFFP 186 (258)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~s~l~~~~~l~~p~~D~i~lT~I~--~~fe~DtfFP 186 (258)
++| ++||++++|+|+ ..++||+|||
T Consensus 135 -------------------------~~L--~lvDel~lT~ip~~~~~~gd~~F~ 161 (193)
T 1juv_A 135 -------------------------AAL--PYADEVVVSRIVKRHRVNSTVQLD 161 (193)
T ss_dssp -------------------------HHG--GGCSEEEEEEEEESSCCCCSEEEC
T ss_pred -------------------------HHH--HhCCEEEEEEeccccccCCCeecC
Confidence 888 799999999997 5679999999
No 24
>1cz3_A Dihydrofolate reductase; dimer, hyperthermophIle, oxidoreductase; 2.10A {Thermotoga maritima} SCOP: c.71.1.1 PDB: 1d1g_A*
Probab=99.96 E-value=9.8e-29 Score=202.45 Aligned_cols=159 Identities=26% Similarity=0.396 Sum_probs=133.9
Q ss_pred eEEEEEeccceeecCCCcccCChhhhhHHHHHHcCCCCCCccceEEEeccccccccCCCCCCCCCcEEEEcCcCCCCCCC
Q psy1579 2 LMITVFLKVQGFFFEACQIFYTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLGSQL 81 (258)
Q Consensus 2 ~~I~a~~~~~giG~~g~lPW~l~~Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip~~~rPL~~R~nvVlSr~~~~~~~~ 81 (258)
.+++|++.++.|+.+++ ||..++|+++|.+++.. .++|||||+||++++ ||+++|.++|+||+... .
T Consensus 4 ~l~~A~slDG~Ia~~~~-~W~~~~~~~~~~~~~~~------~dailmGr~T~~~l~---~p~~~~~~~V~s~~~~~---~ 70 (168)
T 1cz3_A 4 IFVLAMDVSGKIASSVE-SWSSFEDRKNFRKITTE------IGNVVMGRITFEEIG---RPLPERLNVVLTRRPKT---S 70 (168)
T ss_dssp EEEEEECTTCEEECSCT-TCSCHHHHHHHHHHHHH------HTEEEEEHHHHHHHC---SCCTTSEEEEECSSCCC---C
T ss_pred EEEEEEcCCCeEECCCC-CCCChHHHHHHHHHHHh------CCEEEEChHHhhcCC---CCCCCCeEEEECCCCCc---c
Confidence 58899999999998888 99999999999999964 489999999999986 79999999999998641 1
Q ss_pred CCCcEEEeC-CHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCcccccchhhhcccCCccchhhhhhhHh
Q psy1579 82 TGPNVTTTS-SLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQE 160 (258)
Q Consensus 82 ~~~~v~v~~-sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~~ 160 (258)
..+++.+.+ |+++|++.|++. +.++|||+||+++|+ +
T Consensus 71 ~~~~~~~~~~~l~~~l~~l~~~----~~~~i~v~GG~~l~~--------------------------------------~ 108 (168)
T 1cz3_A 71 NNPSLVFFNGSPADVVKFLEGK----GYERVAVIGGKTVFT--------------------------------------E 108 (168)
T ss_dssp SCTTEEEECSCHHHHHHHHHHT----TCSEEEEEECHHHHH--------------------------------------H
T ss_pred CCCCEEEEeCCHHHHHHHHHhC----CCCEEEEECCHHHHH--------------------------------------H
Confidence 235787776 999999999864 478999999999999 9
Q ss_pred hhCCCcccEEEEEeecccc-cccccCCCCC--CCcEEEecCCCCCCCcccCCccEEEEEEEEcCC
Q psy1579 161 SLNSPYCDKVYVTQIHHHF-DCDTFFPSLS--DKFQLIKDPNIPDDVQKENDLNFQFKVFQKELA 222 (258)
Q Consensus 161 ~l~~p~~D~i~lT~I~~~f-e~DtfFP~l~--~~f~li~~~~i~~~~~een~~~f~f~~y~r~~~ 222 (258)
+|+++++|++++|.+|..+ +|+++||.++ ..|++++...++ + +.+.+..|++...
T Consensus 109 ~l~~~lvDel~l~~~p~~lG~g~~~f~~~~~~~~l~l~~~~~~~------~-~~~~~l~Y~~~~~ 166 (168)
T 1cz3_A 109 FLREKLVDELFVTVEPYVFGKGIPFFDEFEGYFPLKLLEMRRLN------E-RGTLFLKYSVEKS 166 (168)
T ss_dssp HHHTTCCSEEEEEECSEEESSCEESSCCCSCEEEEEEEEEEECS------S-SCCEEEEEEEC--
T ss_pred HHhCCCCCEEEEEEeceecCCCCcCCCCCCcccccEEeeeEEeC------C-CCEEEEEEEEccc
Confidence 9999999999999999988 6899999886 478888765432 2 1378899988654
No 25
>3jtw_A Dihydrofolate reductase; YP_805003.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 1.90A {Pediococcus pentosaceus atcc 25745}
Probab=99.95 E-value=3.7e-27 Score=195.86 Aligned_cols=157 Identities=15% Similarity=0.279 Sum_probs=132.8
Q ss_pred eEEEEEeccceee-cCCCcccCChh-----hhhHHHHHHcCCCCCCccceEEEeccccccccC----CCCCCCCCcEEEE
Q psy1579 2 LMITVFLKVQGFF-FEACQIFYTRK-----DMAHFSRITKKTENSNRVNAVIMGRKTWDSIPE----KFRPLPGRYNVVL 71 (258)
Q Consensus 2 ~~I~a~~~~~giG-~~g~lPW~l~~-----Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip~----~~rPL~~R~nvVl 71 (258)
.+++|++-++.|+ .+|+++|.+++ ++++|.+.+.. .++||||||||++++. ..+|+++|.+||+
T Consensus 7 ~l~~A~SlDG~Ia~~~g~~~W~~~~~~~~~~~~~~~~~~~~------~~ailmGr~T~~~~~p~~~~~~~p~~~~~~iV~ 80 (178)
T 3jtw_A 7 ILFIAMSIDNYIADDQGAVDWLEKNVHGTESDDSYEKMYSK------IDTVIMGRTTYEQVTQKLSPEKYVYADRQTYIV 80 (178)
T ss_dssp EEEEEEETTCEEECTTSCCHHHHTTCCCCCCCCHHHHHHHH------EEEEEEEHHHHHHHHHHTCSSSCTTTTSEEEEE
T ss_pred EEEEEEecceEEECCCCCcCcccccCCccchhhHHHHHHhc------CCEEEEChHHHhhhhhccCCCCCCCCCCCEEEE
Confidence 5789999999999 89999999875 57999999864 4899999999999862 3479999999999
Q ss_pred cCcCCCCCCCCCCcEEEeC-CHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCcccccchhhhcccCCcc
Q psy1579 72 TRNSDLGSQLTGPNVTTTS-SLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNAS 150 (258)
Q Consensus 72 Sr~~~~~~~~~~~~v~v~~-sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (258)
||+... ..+++.+.+ |+++|++.|++. ..++|||+||+++|+
T Consensus 81 s~~~~~----~~~~~~~~~~~l~~~l~~l~~~----~~~~i~v~GG~~l~~----------------------------- 123 (178)
T 3jtw_A 81 TSHLGE----DTDKIKYWKQSPVELVKRIQKE----KGKDVWIVGGAKIID----------------------------- 123 (178)
T ss_dssp CSSCCC----CCSSEEEECSCHHHHHHHHHTS----SCCEEEEEECHHHHH-----------------------------
T ss_pred eCCCCC----CCCCEEEEcCCHHHHHHHHHhC----CCCEEEEEChHHHHH-----------------------------
Confidence 998753 346777765 999999999864 578999999999999
Q ss_pred chhhhhhhHhhhCCCcccEEEEEeecccc-cccccCCCCC--CCcEEEecCCCCCCCcccCCccEEEEEEEE
Q psy1579 151 FMFSVLSLQESLNSPYCDKVYVTQIHHHF-DCDTFFPSLS--DKFQLIKDPNIPDDVQKENDLNFQFKVFQK 219 (258)
Q Consensus 151 ~~~s~l~~~~~l~~p~~D~i~lT~I~~~f-e~DtfFP~l~--~~f~li~~~~i~~~~~een~~~f~f~~y~r 219 (258)
++|+++++|++++|.+|..+ +|+++||.++ ..|++++...+ + .+.+..|+|
T Consensus 124 ---------~~l~~~lvDel~l~~~p~~~G~g~~~f~~~~~~~~l~l~~~~~~-------~--~~v~l~Y~r 177 (178)
T 3jtw_A 124 ---------PLVQANLIDTYILTTVPIFLGSGIRLFDRLEEQVPVRLIDVYQK-------N--ELVYSIYQR 177 (178)
T ss_dssp ---------HHHHTTCCSEEEEEEESCCCCSSEESSSCCCSCCCEEEEEEEEE-------T--TEEEEEEEE
T ss_pred ---------HHHHCCCceEEEEEEecEEEcCCCcccCCCCcCcceEEeEEEEE-------C--CEEEEEEEe
Confidence 99999999999999999999 9999999876 57888876432 2 256777765
No 26
>3ky8_A Putative riboflavin biosynthesis protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE UNL; 2.12A {Shewanella loihica}
Probab=99.92 E-value=8.6e-25 Score=186.17 Aligned_cols=162 Identities=17% Similarity=0.184 Sum_probs=128.5
Q ss_pred eEEEEEeccceee-cCCCcccCChh-----hhhHHHHHHcCCCCCCccceEEEeccccccccCC--CCCCCCCcEEEEcC
Q psy1579 2 LMITVFLKVQGFF-FEACQIFYTRK-----DMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEK--FRPLPGRYNVVLTR 73 (258)
Q Consensus 2 ~~I~a~~~~~giG-~~g~lPW~l~~-----Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip~~--~rPL~~R~nvVlSr 73 (258)
.+++|++-++-|+ .+|+++|.+++ |..+|.+..+. .++|||||||||+++.. .+|+ ++.+||+||
T Consensus 23 ~l~~A~SlDG~Ia~~~g~~~W~~~~~~~~~~~~~~~~~~~~------~~ailmGr~T~e~~~~~~~~~P~-~~~~iVls~ 95 (197)
T 3ky8_A 23 IVFIATSLDGYIADKRGKLDWLHSVPNPNNVDTGFVALMER------VDGLVMGRNTLDMVLSFDCDWPY-SKPVFVLSN 95 (197)
T ss_dssp EEEEEEETTSEEECTTSCCGGGGGSCCTTCCCCSHHHHHHH------CSEEEEEHHHHHHHCCTTCCCCC-SSCEEEECS
T ss_pred EEEEEECCCCceECCCCCcCcCcCCCccchHHHHHHHHHHh------CCEEEEcHHHhHhHhhcCCCCCC-CCcEEEEeC
Confidence 5789999999997 89999999775 45567665433 38999999999999853 3687 568999999
Q ss_pred cCCCCCCCCCCcEEE-eCCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCcccccchhhhcccCCccch
Q psy1579 74 NSDLGSQLTGPNVTT-TSSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFM 152 (258)
Q Consensus 74 ~~~~~~~~~~~~v~v-~~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (258)
+.........+++.+ ..|++++++.|++. ..++|||+||+++ +
T Consensus 96 ~~~~~~~~~~~~~~~v~~~l~~~l~~L~~~----~~~~i~v~GG~~l-~------------------------------- 139 (197)
T 3ky8_A 96 TMTEVPQGYEDKVFLVKGKLVDIIADLNAK----GFNELYIDGGVTI-Q------------------------------- 139 (197)
T ss_dssp SCCSCCTTCTTTEEEECSCHHHHHHHHHHT----TCCEEEEESHHHH-H-------------------------------
T ss_pred CCCCCccccCCCEEEEeCCHHHHHHHHHhC----CCCeEEEEehHHH-H-------------------------------
Confidence 875311111146766 48999999999864 4789999999999 9
Q ss_pred hhhhhhHhhhCCCcccEEEEEeecccc-cccccCCCCC--CCcEEEecCCCCCCCcccCCccEEEEEEEEcC
Q psy1579 153 FSVLSLQESLNSPYCDKVYVTQIHHHF-DCDTFFPSLS--DKFQLIKDPNIPDDVQKENDLNFQFKVFQKEL 221 (258)
Q Consensus 153 ~s~l~~~~~l~~p~~D~i~lT~I~~~f-e~DtfFP~l~--~~f~li~~~~i~~~~~een~~~f~f~~y~r~~ 221 (258)
++|+.+++|++++|.+|..+ +|+++||.++ ..|++++...++ +| +.+..|++..
T Consensus 140 -------~~l~~glvDel~l~~~P~~lG~G~~~f~~~~~~~~l~l~~~~~~~------~g--~v~l~Y~~~~ 196 (197)
T 3ky8_A 140 -------NFLKEDLIDEMVITRFPILLGGGVPLFGELESSLSFNVIKSEVVL------DS--LTQTTYHRKR 196 (197)
T ss_dssp -------HHHHTTCCCEEEEEEESEECSSSEESCCCCSSCEEEEEEEEEEET------TT--EEEEEEEECC
T ss_pred -------HHHhCCCCCEEEEEEeeEEECCCCcccCCCCcCcceEEEEEEEeC------CC--EEEEEEEEcc
Confidence 89999999999999999998 7999999886 578888765443 33 7888898764
No 27
>2xw7_A Dihydrofolate reductase; oxidoreductase, NADPH; HET: PG4 NDP; 2.00A {Mycobacterium smegmatis}
Probab=99.92 E-value=2.8e-25 Score=182.64 Aligned_cols=159 Identities=14% Similarity=0.178 Sum_probs=127.3
Q ss_pred eEEEEEeccceee-cCCCcccCChh---h--hhHHHHHHcCCCCCCccceEEEeccccccccC-CCCCCCCCcEEEEcCc
Q psy1579 2 LMITVFLKVQGFF-FEACQIFYTRK---D--MAHFSRITKKTENSNRVNAVIMGRKTWDSIPE-KFRPLPGRYNVVLTRN 74 (258)
Q Consensus 2 ~~I~a~~~~~giG-~~g~lPW~l~~---D--m~~F~~iT~~~~~~~~~naVIMGRKTweSip~-~~rPL~~R~nvVlSr~ 74 (258)
.+++|++.++.|+ .+|.+||.+++ | +++|.+.+.. .++|||||+||++++. ..+|+ ++.+||+|++
T Consensus 7 ~~~~A~SlDG~Ia~~~g~~~W~~~~~~~~~~~~~~~~~~~~------~dailmGr~T~~~~~~~~~~P~-~~~~iV~s~~ 79 (178)
T 2xw7_A 7 VYYTASSLDGYIVDENQSLDWLTSRDITPDGPFGYEQFIET------IGVLVMGASTYEWVVEHGDWSY-DQPAWVLTHR 79 (178)
T ss_dssp EEEEEEETTSBSSCTTSCCHHHHTSCCCTTSTTCHHHHHHT------EEEEEEEHHHHHHHHHSSCCCC-SSCEEEECSC
T ss_pred EEEEEEcccCceECCCCCcccccCCCCcccchhhHHHHHHh------CCEEEECHHHHhhhhcCCCCCC-CCCEEEEeCC
Confidence 5789999999995 89999999763 3 7899999865 4899999999999973 12454 8889999998
Q ss_pred CCCCCCCCCCcEEEe-CCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCcccccchhhhcccCCccchh
Q psy1579 75 SDLGSQLTGPNVTTT-SSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMF 153 (258)
Q Consensus 75 ~~~~~~~~~~~v~v~-~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (258)
... ....+++.+. .|+++|++.|++.. .+++|||+||+++|+
T Consensus 80 ~~~--~~~~~~~~~~~~dl~~~l~~L~~~~---~~~~v~v~GG~~l~~-------------------------------- 122 (178)
T 2xw7_A 80 PEI--AAESHPMQVFSGDVAELHPELVAAA---GGKDVWVVGGGDVAA-------------------------------- 122 (178)
T ss_dssp GGG--CBTTBCCEEECSCHHHHHHHHHHHT---TTSEEEEEECHHHHH--------------------------------
T ss_pred CCC--cCCCCCEEEECCCHHHHHHHHHhcc---CCCcEEEEccHHHHH--------------------------------
Confidence 311 1233466665 79999999998752 348999999999999
Q ss_pred hhhhhHhhhCCCcccEEEEEeecccc-cccccCCCCCCCcEEEecCCCCCCCcccCCccEEEEEEEEc
Q psy1579 154 SVLSLQESLNSPYCDKVYVTQIHHHF-DCDTFFPSLSDKFQLIKDPNIPDDVQKENDLNFQFKVFQKE 220 (258)
Q Consensus 154 s~l~~~~~l~~p~~D~i~lT~I~~~f-e~DtfFP~l~~~f~li~~~~i~~~~~een~~~f~f~~y~r~ 220 (258)
++|++++||++++|.+|..+ +|+++||... .|++++...+ ++ +.+..|++.
T Consensus 123 ------~~l~~gLvDel~l~~~P~~lG~g~~~f~~~~-~l~l~~~~~~-------~~--~v~l~y~~~ 174 (178)
T 2xw7_A 123 ------QFVAADLIDEIIVSYAPCTLGVGSRVLPMRS-EWVLDDCARN-------GD--FVCARWKRP 174 (178)
T ss_dssp ------HHHHTTCCCEEEEEEESEECSSSSBSSCSCE-ECEEEEEEEE-------TT--EEEEEEECC
T ss_pred ------HHHHCCCCeEEEEEEeceEecCCCcCCCCCC-ceEEEeEEEe-------CC--eEEEEEEEc
Confidence 99999999999999999999 8999999876 8888766432 22 677788764
No 28
>2gd9_A Hypothetical protein YYAP; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=99.89 E-value=2.6e-23 Score=172.01 Aligned_cols=157 Identities=11% Similarity=0.207 Sum_probs=125.5
Q ss_pred eEEEEEeccceee-cCCCcccCChhhhhHHHHHHcCCCCCCccceEEEeccccccccCCCCC----------CC----CC
Q psy1579 2 LMITVFLKVQGFF-FEACQIFYTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEKFRP----------LP----GR 66 (258)
Q Consensus 2 ~~I~a~~~~~giG-~~g~lPW~l~~Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip~~~rP----------L~----~R 66 (258)
.+++|++-++.|+ .+|.++|.+++|.++|.+.+.. .++|||||+||++++.. +| ++ ++
T Consensus 12 ~~~~A~SlDG~Ia~~~g~~~W~~~~~~~~~~~~~~~------~dail~Gr~T~~~~~~~-~p~~~Pd~~~~~~~~~~~~~ 84 (189)
T 2gd9_A 12 ILDLAVTLDGFIEGKNGEVDWCIMDPDMGFTDFLNQ------IDTILYGRKSFDLWGQY-IPKNEDPDTEKELWKLVHSK 84 (189)
T ss_dssp EEEEEECTTSEEECTTSCCTTCCCCTTSCHHHHHHT------EEEEEEEHHHHHHHTTC-----------CCHHHHHHHS
T ss_pred EEEEEEccccceECCCCCcCcccCChHHHHHHHHhc------CCEEEEChHHHhhhhhc-CCCCCCccccchhHHHhCCC
Confidence 5789999999998 5899999977777789998764 48999999999999742 33 22 78
Q ss_pred cEEEEcCcCCCCCCCCCCcEEEe-CCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCcccccchhhhcc
Q psy1579 67 YNVVLTRNSDLGSQLTGPNVTTT-SSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKKKGLILLCTR 145 (258)
Q Consensus 67 ~nvVlSr~~~~~~~~~~~~v~v~-~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (258)
.++|+|++... ... ++.+. .|++++++.|++. ..++|||+||+++|.
T Consensus 85 ~~iV~t~~~~~---~~~-~~~~~~~~l~~~l~~L~~~----~~~~i~v~GG~~l~~------------------------ 132 (189)
T 2gd9_A 85 KKYVFSRTQNE---IDN-QAIFINDNILEEVNKLKKN----PGKDIWLYGGASLIT------------------------ 132 (189)
T ss_dssp EEEEECCEEET---TTT-EEECCHHHHHHHHHHHHHS----CCSEEEEEECHHHHH------------------------
T ss_pred CEEEEeCCCCC---CCC-CeEEEcCCHHHHHHHHHhC----CCCeEEEEChHHHHH------------------------
Confidence 99999997532 122 67665 5999999999875 468999999999999
Q ss_pred cCCccchhhhhhhHhhhCCCcccEEEEEeecccc-cccccCCCCC--CCcEEEecCCCCCCCcccCCccEEEEEEEE
Q psy1579 146 KSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHF-DCDTFFPSLS--DKFQLIKDPNIPDDVQKENDLNFQFKVFQK 219 (258)
Q Consensus 146 ~~~~~~~~s~l~~~~~l~~p~~D~i~lT~I~~~f-e~DtfFP~l~--~~f~li~~~~i~~~~~een~~~f~f~~y~r 219 (258)
++|+++++|++++|.+|..+ +|+++||.+. ..|++++...+. +| +.+..|++
T Consensus 133 --------------~~l~~glvDel~l~~~P~~lG~g~~~f~~~~~~~~l~l~~~~~~~------~~--~~~l~y~~ 187 (189)
T 2gd9_A 133 --------------TFINLGLVDEFRLSIHPVVLGEGKPLFIDVKQRINLKMVNTRTFS------SG--VVQIVYHW 187 (189)
T ss_dssp --------------HHHHTTCCCEEEEEECSEECSSSEESSCSCCSCEECEEEEEEECT------TS--CEEEEEEC
T ss_pred --------------HHHHCCCceEEEEEEeCEEeCCCCccCCCCCCCcceEEEEEEEcC------CC--EEEEEEEe
Confidence 99999999999999999999 7999999874 578888765443 33 45566654
No 29
>3kgy_A Bifunctional deaminase-reductase domain protein; putative dihydrofolate reductase, structural genomics; HET: MSE NDP; 1.50A {Chloroflexus aurantiacus j-10-fl}
Probab=99.82 E-value=6.7e-20 Score=161.92 Aligned_cols=125 Identities=18% Similarity=0.253 Sum_probs=96.3
Q ss_pred ccceEEEeccccccccCC---CCCCCCCcEEEEcCcCCCCCCCCC-CcE---EEeCCHHHHHHHHHhhccCCCCCcEEEE
Q psy1579 42 RVNAVIMGRKTWDSIPEK---FRPLPGRYNVVLTRNSDLGSQLTG-PNV---TTTSSLDQAIDLLRHKKSKGEIENVWVI 114 (258)
Q Consensus 42 ~~naVIMGRKTweSip~~---~rPL~~R~nvVlSr~~~~~~~~~~-~~v---~v~~sl~~ai~~l~~~~~~~~~~~I~Vi 114 (258)
++++|||||||||+++.. .+|+ +|.+||+||+... .... .++ ++..|+++|++.|++.. ..++|||+
T Consensus 95 ~i~~vIMGRkTye~~~~~wp~~~p~-~r~~iVlS~~~~~--~~~~~~~~~v~~v~~~l~eal~~l~~~~---~~~~I~V~ 168 (231)
T 3kgy_A 95 RTGAHIMGKRMFEGGERGWPEEAPF-HTPVYVLTHERRN--PWVRPGGTTFYFVNDGPEQALALAREAA---GERDIRIS 168 (231)
T ss_dssp TEEEEEEEHHHHHHHHHHSCSSCSC-CSEEEEECSSCCC--CEEETTTEEEEEECSCHHHHHHHHHHHH---TTSEEEEE
T ss_pred cCCEEEEChhhhhhhhhhcCCcCcC-CCcEEEEcCCCCC--ccccCCCcEEEEEcCCHHHHHHHHHhhc---CCCcEEEe
Confidence 369999999999999742 1344 8999999998753 1122 233 35689999999997621 46899999
Q ss_pred eChhhhcccccccccccCCcccccchhhhcccCCccchhhhhhhHhhhCCCcccEEEEEeecccc-cccccCCCCC---C
Q psy1579 115 GGSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHF-DCDTFFPSLS---D 190 (258)
Q Consensus 115 GGa~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~~~l~~p~~D~i~lT~I~~~f-e~DtfFP~l~---~ 190 (258)
||+++|+ ++|++++||++++|.+|..+ +||++||.++ .
T Consensus 169 GG~~l~~--------------------------------------~~L~~gLvDel~lti~Pv~lG~G~~lF~~~~~~~~ 210 (231)
T 3kgy_A 169 GGANVIQ--------------------------------------QYLNLGLVDELEIALIPVIFGGGRRLFENLHEPLP 210 (231)
T ss_dssp ECHHHHH--------------------------------------HHHHTTCCSEEEEEEESCCCSSSEESSCSCCSSCC
T ss_pred CCHHHHH--------------------------------------HHHhCCCCCEEEEEEeceeccCCCccCCCCCCccc
Confidence 9999999 99999999999999999998 8999999876 3
Q ss_pred CcEEEecCCCCCCCcccCCccEEEEEEEE
Q psy1579 191 KFQLIKDPNIPDDVQKENDLNFQFKVFQK 219 (258)
Q Consensus 191 ~f~li~~~~i~~~~~een~~~f~f~~y~r 219 (258)
.|++... .. .+| +.+..|+|
T Consensus 211 ~l~l~~~-~~------~~G--vv~l~Y~r 230 (231)
T 3kgy_A 211 QFRIDRV-LA------SPT--ATHLRYVR 230 (231)
T ss_dssp CEEEEEE-EE------CSS--CEEEEEEE
T ss_pred eeEEEEE-Ec------CCC--EEEEEEEe
Confidence 5776532 11 245 67777765
No 30
>2b3z_A Riboflavin biosynthesis protein RIBD; alpha/beta/alpha, deaminase domain and reductase domain, hydrolase, oxidoreductase; 2.41A {Bacillus subtilis} SCOP: c.71.1.2 c.97.1.2 PDB: 2d5n_A* 3ex8_A*
Probab=99.44 E-value=3.1e-13 Score=124.94 Aligned_cols=151 Identities=12% Similarity=0.112 Sum_probs=109.6
Q ss_pred eEEEEEeccceee-cCCCcccCC-hhhhhHHHHHHcCCCCCCccceEEEeccccccccC----C-----CCC--------
Q psy1579 2 LMITVFLKVQGFF-FEACQIFYT-RKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPE----K-----FRP-------- 62 (258)
Q Consensus 2 ~~I~a~~~~~giG-~~g~lPW~l-~~Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip~----~-----~rP-------- 62 (258)
.+.+|++-.+-|+ .+|..+|.. +++.++|.++... .++|||||+||+.... + ..|
T Consensus 161 ~lk~A~SLDG~Ia~~~G~~~Wit~~~~~~~~~~lr~~------~daILvGr~T~~~d~P~Lt~R~~~g~~~P~rvVld~~ 234 (373)
T 2b3z_A 161 TLKAAASLDGKIATSTGDSKWITSEAARQDAQQYRKT------HQSILVGVGTVKADNPSLTCRLPNVTKQPVRVILDTV 234 (373)
T ss_dssp EEEEEEETTSBSSCTTSCCTTSSCHHHHHHHTTHHHH------SSEEEEEHHHHHHHCCCCCCCSTTCCSCCEEEEECTT
T ss_pred eeeeeecCCCceeccCCCccccCCHHHHHHHHHHHHH------CCEEEEChhhhhhcCCcccccCcCCCCCCeEEEEcCC
Confidence 4678888888887 789999985 7888999887754 4899999999998422 0 011
Q ss_pred --CC---------CCcEEEEcCcCCCCC---CCCCCcEEEe------CCHHHHHHHHHhhccCCCCCcEEEEeChhhhcc
Q psy1579 63 --LP---------GRYNVVLTRNSDLGS---QLTGPNVTTT------SSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKL 122 (258)
Q Consensus 63 --L~---------~R~nvVlSr~~~~~~---~~~~~~v~v~------~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~ 122 (258)
++ ++.++|+|++..... .+...++.+. .|+.++++.|++. +.++|||.||++++.
T Consensus 235 ~~lp~~a~~~~~~~~~~iV~t~~~~~~~~~~~l~~~gv~vi~~~~~~~dl~~~l~~L~~~----g~~~vlveGG~~l~~- 309 (373)
T 2b3z_A 235 LSIPEDAKVICDQIAPTWIFTTARADEEKKKRLSAFGVNIFTLETERIQIPDVLKILAEE----GIMSVYVEGGSAVHG- 309 (373)
T ss_dssp CCCCTTCHHHHSCSSCEEEEECTTSCHHHHHHHHTTTCEEEECSSSSCCHHHHHHHHHHT----TCCEEEEEECHHHHH-
T ss_pred CCCCCcchhhcCCCCCEEEEEcCCCCHHHHHHHHhCCcEEEEeCCCCCCHHHHHHHHHHC----CCCEEEEEEhHHHHH-
Confidence 11 466777776542100 0123355554 5899999999875 578999999999999
Q ss_pred cccccccccCCcccccchhhhcccCCccchhhhhhhHhhhCCCcccEEEEEeeccccc---ccccCCCC-----C--CCc
Q psy1579 123 TEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFD---CDTFFPSL-----S--DKF 192 (258)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~~~l~~p~~D~i~lT~I~~~fe---~DtfFP~l-----~--~~f 192 (258)
++|+++++|+++++.+|..+. +-++|+.. + -.|
T Consensus 310 -------------------------------------s~L~agLVDEl~l~iaP~llG~~~g~~lf~~~~~~~~~~~~~l 352 (373)
T 2b3z_A 310 -------------------------------------SFVKEGCFQEIIFYFAPKLIGGTHAPSLISGEGFQSMKDVPLL 352 (373)
T ss_dssp -------------------------------------HHHHHTCCSEEEEEEESBCCCCSSSCBSSCSSCCSSTTSSCBE
T ss_pred -------------------------------------HHHhCCCceEEEEEEcceEecCCCCcCcccccccccccccccc
Confidence 899999999999999999884 45677643 2 357
Q ss_pred EEEecCCC
Q psy1579 193 QLIKDPNI 200 (258)
Q Consensus 193 ~li~~~~i 200 (258)
++++...+
T Consensus 353 ~l~~~~~~ 360 (373)
T 2b3z_A 353 QFTDITQI 360 (373)
T ss_dssp EEEEEEEE
T ss_pred eEeEEEEE
Confidence 77665443
No 31
>2azn_A HTP reductase, putative 5-amino-6-(5-phosphoribosylamino)uracil; oxidoreductase; HET: MA5 NAP EPE; 2.70A {Methanocaldococcus jannaschii} SCOP: c.71.1.2
Probab=99.18 E-value=4.4e-10 Score=95.06 Aligned_cols=143 Identities=16% Similarity=0.188 Sum_probs=96.1
Q ss_pred EEEEecccee-ecCCCcccCC-hhhhhHHHHHHcCCCCCCccceEEEecccccccc----C-C----CCCCCCCcEEEEc
Q psy1579 4 ITVFLKVQGF-FFEACQIFYT-RKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIP----E-K----FRPLPGRYNVVLT 72 (258)
Q Consensus 4 I~a~~~~~gi-G~~g~lPW~l-~~Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip----~-~----~rPL~~R~nvVlS 72 (258)
-.|++-.|-| +.+|.. |.. +++.+++.++... .++|+|||+||+..- . + .+|+ .||++
T Consensus 9 ~~a~SLDG~ia~~~g~~-wit~~~~~~~~~~lr~~------~dailvG~~T~~~d~p~L~~~r~~~~~~P~----~vV~d 77 (219)
T 2azn_A 9 NVGMTLDGKLATINNDS-RISCEEDLIRVHKIRAN------VDGIMVGIGTVLKDDPRLTVHKIKSDRNPV----RIVVD 77 (219)
T ss_dssp EEEEETTCBSSCTTCCC-CCCCHHHHHHHHHHHHT------SSEEEEEHHHHHHHCCCCSCCSSCCSSCCE----EEEEC
T ss_pred EEEEcCCCCEecCCCCC-CCCCHHHHHHHHHHHHH------CCEEEEChhehhhcCCcCccccccCCCCCE----EEEEC
Confidence 3455555555 577888 974 4556677777665 489999999999641 1 1 1232 34444
Q ss_pred CcCCCC--------------------CC-----CC---CCcEEEe------CCHHHHHHHHHhhccCCCCCcEEEEeChh
Q psy1579 73 RNSDLG--------------------SQ-----LT---GPNVTTT------SSLDQAIDLLRHKKSKGEIENVWVIGGSS 118 (258)
Q Consensus 73 r~~~~~--------------------~~-----~~---~~~v~v~------~sl~~ai~~l~~~~~~~~~~~I~ViGGa~ 118 (258)
++.... .. .. ..++.+. .|+.++++.|++. +.++|||.||++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~V~t~~~~~~~~~~~l~~~~~~~~~v~~~~~~~~dl~~~l~~L~~~----g~~~ilveGG~~ 153 (219)
T 2azn_A 78 SKLRVPLNARVLNKDAKTIIATTEDTNEEKEKKIKILEDMGVEVVKCGRGKVDLKKLMDILYDK----GIKSILLEGGGT 153 (219)
T ss_dssp TTCCCCTTCGGGSTTSCEEEEECSCCCHHHHHHHHHHHHTTCEEEECCSSSCCHHHHHHHHHHT----TCCEEEEEECHH
T ss_pred CCCCCCccchhhcCCCCEEEEEcCCCCHHHHHHhhhhhcCCeEEEEcCCCCcCHHHHHHHHHHc----CCCEEEEeeCHH
Confidence 432210 00 00 1134443 4899999999875 578999999999
Q ss_pred hhcccccccccccCCcccccchhhhcccCCccchhhhhhhHhhhCCCcccEEEEEeecccccc---cccCCCC-----C-
Q psy1579 119 IYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFDC---DTFFPSL-----S- 189 (258)
Q Consensus 119 iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~~~l~~p~~D~i~lT~I~~~fe~---DtfFP~l-----~- 189 (258)
+.. ++|+++++||++++..|..+.+ -++|+.. .
T Consensus 154 l~~--------------------------------------s~l~~gLvDel~l~iaP~llG~~~~~~lf~~~~~~~~~~ 195 (219)
T 2azn_A 154 LNW--------------------------------------GMFKEGLVDEVSVYIAPKIFGGKEAPTYVDGEGFKTVDE 195 (219)
T ss_dssp HHH--------------------------------------HHHHTTCCCEEEEEEESCCCCCTTSCBSSCSSCCSSGGG
T ss_pred HHH--------------------------------------HHHHCCCCcEEEEEEcCeeecCCCCcCcccCcCccchhh
Confidence 999 9999999999999999988843 4677653 2
Q ss_pred -CCcEEEecCC
Q psy1579 190 -DKFQLIKDPN 199 (258)
Q Consensus 190 -~~f~li~~~~ 199 (258)
..|++++...
T Consensus 196 ~~~l~l~~~~~ 206 (219)
T 2azn_A 196 CVKLELKNFYR 206 (219)
T ss_dssp SCCEEEEEEEE
T ss_pred ccccEEEEEEE
Confidence 4677776543
No 32
>2hxv_A Diaminohydroxyphosphoribosylaminopyrimidine deami amino-6-(5-phosphoribosylamino)uracil...; oxidoreductase, structural genomics; HET: NDP; 1.80A {Thermotoga maritima} SCOP: c.71.1.2 c.97.1.2
Probab=98.90 E-value=3.3e-08 Score=91.01 Aligned_cols=146 Identities=20% Similarity=0.216 Sum_probs=96.2
Q ss_pred EEEecccee-ecCCCcccCChhhhhHHHHHHcCCCCCCccceEEEeccccccc-c---CCCCCCCCCcEEEEcCcCCCCC
Q psy1579 5 TVFLKVQGF-FFEACQIFYTRKDMAHFSRITKKTENSNRVNAVIMGRKTWDSI-P---EKFRPLPGRYNVVLTRNSDLGS 79 (258)
Q Consensus 5 ~a~~~~~gi-G~~g~lPW~l~~Dm~~F~~iT~~~~~~~~~naVIMGRKTweSi-p---~~~rPL~~R~nvVlSr~~~~~~ 79 (258)
.|++-.|-| +.+|...|..+++.+++.++... .++|||||+||+.. | .+.++-.+...||++++.....
T Consensus 166 ~A~SLDG~IA~~~G~s~Wit~~~~~~~~~lr~~------~DAILvG~~T~~~d~P~Lt~r~~~g~~P~rvVld~~~~~p~ 239 (360)
T 2hxv_A 166 YASTLDGKIADHRGDSKWITDKLRFKVHEMRNI------YSAVLVGAGTVLKDNPQLTCRLKEGRNPVRVILDRKGVLSG 239 (360)
T ss_dssp EEEETTSEEECTTSCCTTSCSTTHHHHHHHHHH------SSEEEEEHHHHHHHCCCCCCCSTTSCCCEEEEECTTCTTTT
T ss_pred hhhccCCcccCCCCCcccCCHHHHHHHHHHHHH------CCEEEECccchhhhCCcccccCCCCCCCeEEEECCCCCCCh
Confidence 444545555 57888889775555667666654 48999999999853 1 1211112334588888754311
Q ss_pred C-C----C-CCcEEEe-----------------CCHHHHHHHHHhhccCCCCCcEEEEeChhhhcccccccccccCCccc
Q psy1579 80 Q-L----T-GPNVTTT-----------------SSLDQAIDLLRHKKSKGEIENVWVIGGSSIYKLTEPLMNRLSTFPKK 136 (258)
Q Consensus 80 ~-~----~-~~~v~v~-----------------~sl~~ai~~l~~~~~~~~~~~I~ViGGa~iy~~~~~~~~~~~~~~~~ 136 (258)
. . . .+.+.++ .|+.++++.|++. +.++|||.||+++..
T Consensus 240 ~~~~~~~~~~~~iv~t~~~~~~~~~~v~v~~~~~dl~~~l~~L~~~----g~~~vlVeGG~~L~~--------------- 300 (360)
T 2hxv_A 240 KVFRVFEENARVIVFTESEEAEYPPHVEKALSDCSVESILRNLYER----DIDSVLVEGGSKVFS--------------- 300 (360)
T ss_dssp CCCGGGSSSSCEEEEESCSSCCCCTTSEEEECCCCHHHHHHHHHHT----TCCEEEECCCHHHHH---------------
T ss_pred hHhHHhcCCCcEEEEECCCchhhccCcEEEcCCCCHHHHHHHHHhC----CCCEEEEEecHHHHH---------------
Confidence 1 0 0 1111222 3899999999775 578999999999999
Q ss_pred ccchhhhcccCCccchhhhhhhHhhhCCCcccEEEEEeecccc-cccccCCC----CC--CCcEEEecCCC
Q psy1579 137 KGLILLCTRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHF-DCDTFFPS----LS--DKFQLIKDPNI 200 (258)
Q Consensus 137 ~~~~~~~~~~~~~~~~~s~l~~~~~l~~p~~D~i~lT~I~~~f-e~DtfFP~----l~--~~f~li~~~~i 200 (258)
++|+.. |+++++..|..+ ++-++|.. +. ..|++++...+
T Consensus 301 -----------------------sfL~ag--DEl~l~iaP~llG~G~~lf~~~~~~~~~~~~L~l~~~~~~ 346 (360)
T 2hxv_A 301 -----------------------EFLDHA--DVVFGFYSTKIFGKGLDVFSGYLSDVSVPPKFKVVNVEFS 346 (360)
T ss_dssp -----------------------HHGGGC--SEEEEEEESCCCSSSEETTTTCCCCTTSCCCEEEEEEEEE
T ss_pred -----------------------HHHHCC--CEEEEEEcceEEcCCCcccccccccccccccceEeEEEEE
Confidence 899888 999999999887 44466643 33 46777765443
No 33
>2g6v_A Riboflavin biosynthesis protein RIBD; RIBD APO structure, structural genomics, structural proteomi europe, spine, hydrolase, oxidoreductase; 2.60A {Escherichia coli} PDB: 2obc_A* 2o7p_A*
Probab=98.78 E-value=4.8e-08 Score=91.41 Aligned_cols=146 Identities=12% Similarity=0.107 Sum_probs=95.3
Q ss_pred EEEecccee-ecCCCcccCC-hhhhhHHHHHHcCCCCCCccceEEEecccccccc----CCCC-----------------
Q psy1579 5 TVFLKVQGF-FFEACQIFYT-RKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIP----EKFR----------------- 61 (258)
Q Consensus 5 ~a~~~~~gi-G~~g~lPW~l-~~Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip----~~~r----------------- 61 (258)
.|++-.|-| +.+|..-|.. +++.+++.++... .++|||||+||+..- .+.+
T Consensus 180 ~A~SLDG~IA~~~G~s~Wit~~~~r~~~~~lra~------~DAILvG~~T~~~d~P~Lt~r~~~~~~~~~~~~~~~~~~~ 253 (402)
T 2g6v_A 180 LGASLDGRTAMASGESQWITSPQARRDVQLLRAQ------SHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQ 253 (402)
T ss_dssp EEECTTCBBCC---CCSCSSCHHHHHHHHHHHHH------CSEEEEEHHHHHHHCCCCCCCGGGCCGGGTSSCCGGGCCC
T ss_pred eeecCCCCCccCCCCcCCcCCHHHHHHHHHHHHh------CCEEEECHHHHhhcCcccccccccccccccccccccccCC
Confidence 344444444 5778888974 4555667666654 489999999998541 1111
Q ss_pred CC-----------------C-CCcEEEEcCcCCCCCCCCCCcEEEe--C------CHHHHHHHHHhhccCCCCCcEEEEe
Q psy1579 62 PL-----------------P-GRYNVVLTRNSDLGSQLTGPNVTTT--S------SLDQAIDLLRHKKSKGEIENVWVIG 115 (258)
Q Consensus 62 PL-----------------~-~R~nvVlSr~~~~~~~~~~~~v~v~--~------sl~~ai~~l~~~~~~~~~~~I~ViG 115 (258)
|+ . +...+|+|++.... .. ..++.+. . |+.++++.|++. +.++|||.|
T Consensus 254 P~rvVld~~~~lp~~a~~~~~~~~~iV~t~~~~~~-~l-~~gv~vi~~~~~~g~vdl~~~l~~L~~~----g~~~vlVEG 327 (402)
T 2g6v_A 254 PIRIVIDSQNRVTPVHRIVQQPGETWFARTQEDSR-EW-PETVRTLLIPEHKGHLDLVVLMMQLGKQ----QINSIWVEA 327 (402)
T ss_dssp CEEEEECTTCCCCTTSGGGSSSSCEEEEESSCCCS-CC-CTTEEEEECCEETTEECHHHHHHHHHHT----TCCEEEECC
T ss_pred CeEEEECCCCCCChhhHhhcCCCCEEEEECCcchh-hh-cCCCEEEEecCCCCCCCHHHHHHHHHhC----CCCEEEEEE
Confidence 21 0 33455555543110 11 2355443 3 899999999875 578999999
Q ss_pred ChhhhcccccccccccCCcccccchhhhcccCCccchhhhhhhHhhhCCCcccEEEEEeeccccc--ccccCCCC-----
Q psy1579 116 GSSIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFD--CDTFFPSL----- 188 (258)
Q Consensus 116 Ga~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~~~l~~p~~D~i~lT~I~~~fe--~DtfFP~l----- 188 (258)
|+++.. ++|+.+++||++++..|..+. +-++|+..
T Consensus 328 G~~L~~--------------------------------------sfL~agLVDEl~l~iaP~llG~~G~~lf~~~~~~~l 369 (402)
T 2g6v_A 328 GPTLAG--------------------------------------ALLQAGLVDELIVYIAPKLLGSDARGLCTLPGLEKL 369 (402)
T ss_dssp CHHHHH--------------------------------------HHHHHTCCCEEEEEECSCCCSSSSCBSCCCCC----
T ss_pred hHHHHH--------------------------------------HHHHCCCccEEEEEEccEEeCCCCcCCCCCcccccc
Confidence 999999 899999999999999999883 55677653
Q ss_pred C--CCcEEEecCCC
Q psy1579 189 S--DKFQLIKDPNI 200 (258)
Q Consensus 189 ~--~~f~li~~~~i 200 (258)
. ..|++++...+
T Consensus 370 ~~~~~L~l~~~~~~ 383 (402)
T 2g6v_A 370 ADAPQFKFKEIRHV 383 (402)
T ss_dssp ---CCCEEEEEEEE
T ss_pred ccccccEEeEEEEE
Confidence 2 45777766544
No 34
>2p4g_A Hypothetical protein; pyrimidine reductase-like protein, structural genomics, JOIN for structural genomics, JCSG; 2.30A {Corynebacterium diphtheriae}
Probab=98.74 E-value=3.5e-07 Score=80.46 Aligned_cols=155 Identities=14% Similarity=0.135 Sum_probs=98.3
Q ss_pred eecCCCcccCC-hhhhhHHHHHHcCCCCCCccceEEEeccccccccCC--C----CC-------C-CCCcEEEEcCcCCC
Q psy1579 13 FFFEACQIFYT-RKDMAHFSRITKKTENSNRVNAVIMGRKTWDSIPEK--F----RP-------L-PGRYNVVLTRNSDL 77 (258)
Q Consensus 13 iG~~g~lPW~l-~~Dm~~F~~iT~~~~~~~~~naVIMGRKTweSip~~--~----rP-------L-~~R~nvVlSr~~~~ 77 (258)
...+|..-|.. +++.+++.++-.. .++|||||+|++.--.. . +| . +....||++++...
T Consensus 48 a~~~g~s~wit~~~~~~~~~~lr~~------~DaIlvG~~T~~~d~p~l~~~~~r~~~~r~~~g~~~~p~~vV~d~~~~~ 121 (270)
T 2p4g_A 48 ATLSGVSGPMGDQTDADLLIQLRGW------ADAIVVGAETARKENYGPVVLPHGIKNQRQKLGRCGLPKLTLLSKSLYF 121 (270)
T ss_dssp SCBTTBSGGGCCHHHHHHHHHHHHH------CSEEEEEHHHHHHTTCCSCCCCHHHHHHHHHTTCCSSCEEEEECSSCCC
T ss_pred cCCCCCccCcCCHHHHHHHHHHHHH------CCEEEEChHHhhhhCCccccccccccccccccCCCCCCcEEEECCCCCC
Confidence 67788888974 5556667666554 48999999999742100 0 00 0 12245666665432
Q ss_pred CC-----CCCCCc-----------------------------EEE--e----CCHHHHHHHHHhhccCCCCCcEEEEeCh
Q psy1579 78 GS-----QLTGPN-----------------------------VTT--T----SSLDQAIDLLRHKKSKGEIENVWVIGGS 117 (258)
Q Consensus 78 ~~-----~~~~~~-----------------------------v~v--~----~sl~~ai~~l~~~~~~~~~~~I~ViGGa 117 (258)
.. +...+. +.+ . .++.++++.|++. ++++|+|-||+
T Consensus 122 p~~~~~~~~~~~~~~~~~V~t~~~~~~~~~~~~~~~~l~~~gv~vi~~~~~~~dl~~~l~~L~~~----g~~~vlvEGG~ 197 (270)
T 2p4g_A 122 DFSSELFSPDLPSELSPLVITQQPANNSEQWDQRLQKLIDVGVEVIVAPTSTNPLKIAFDALHAR----RLKKISIEGGP 197 (270)
T ss_dssp CTTSGGGCTTSCGGGSCEEEEECCSSCCHHHHHHHHHHHHHTCCEEEECSSSCHHHHHHHHHHTT----TCCEEEEEECH
T ss_pred CccchhhcCCCCCcceEEEEEcCccccccchHHHHHHHHhCCCEEEEcCCCCCCHHHHHHHHHHC----CCCEEEEecCH
Confidence 10 000111 111 1 2577888888754 58899999999
Q ss_pred hhhcccccccccccCCcccccchhhhcccCCccchhhhhhhHhhhCCCcccEEEEEeeccccc--ccccCCC--CC--CC
Q psy1579 118 SIYKLTEPLMNRLSTFPKKKGLILLCTRKSNASFMFSVLSLQESLNSPYCDKVYVTQIHHHFD--CDTFFPS--LS--DK 191 (258)
Q Consensus 118 ~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~~~l~~p~~D~i~lT~I~~~fe--~DtfFP~--l~--~~ 191 (258)
++.. ++|+++++||++++..|..+. +-+.|+. .. ..
T Consensus 198 ~l~~--------------------------------------sfL~agLVDEl~l~iaP~llG~~g~~~f~~~~~~~~~~ 239 (270)
T 2p4g_A 198 SVYR--------------------------------------QALSLGIVDRLHLTIAPNIICPVESPLFGKISDDSFTT 239 (270)
T ss_dssp HHHH--------------------------------------HHHHHTCCCEEEEEEESCCCSSCSSBTTCSCTTSCCCC
T ss_pred HHHH--------------------------------------HHHHCCCCeEEEEEEcCEEEcCCCcCcccCcCcCcCcc
Confidence 9999 899999999999999998883 5567765 22 57
Q ss_pred cEEEecCCCCCCCcccCCccEEEEEEEEcCC
Q psy1579 192 FQLIKDPNIPDDVQKENDLNFQFKVFQKELA 222 (258)
Q Consensus 192 f~li~~~~i~~~~~een~~~f~f~~y~r~~~ 222 (258)
|++++....+ -++ ..+..|++..+
T Consensus 240 l~l~~~~~~~-----~~g--~v~l~Y~~~~~ 263 (270)
T 2p4g_A 240 RLVLEMLSSS-----PNG--LIFSRYKVIRD 263 (270)
T ss_dssp CEEEEEEEEC-----TTC--CEEEEEEECCC
T ss_pred eEEEEEEEec-----cCC--EEEEEEEECCC
Confidence 8887653211 023 46777876533
No 35
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=32.48 E-value=24 Score=29.61 Aligned_cols=11 Identities=45% Similarity=0.652 Sum_probs=8.5
Q ss_pred CCcEEEEeChh
Q psy1579 108 IENVWVIGGSS 118 (258)
Q Consensus 108 ~~~I~ViGGa~ 118 (258)
.+-+|||||+-
T Consensus 101 ~~i~FvIGGa~ 111 (167)
T 1to0_A 101 SKVTFVIGGSL 111 (167)
T ss_dssp CEEEEEECCSS
T ss_pred ceEEEEEECCC
Confidence 45679999984
No 36
>1o6d_A Hypothetical UPF0247 protein TM0844; structural genomics, unknown function; 1.66A {Thermotoga maritima} SCOP: c.116.1.3
Probab=29.89 E-value=29 Score=29.14 Aligned_cols=13 Identities=23% Similarity=0.232 Sum_probs=9.4
Q ss_pred CCcEEEEeChhhh
Q psy1579 108 IENVWVIGGSSIY 120 (258)
Q Consensus 108 ~~~I~ViGGa~iy 120 (258)
.+-+|||||+.-.
T Consensus 95 ~~i~FvIGGa~Gl 107 (163)
T 1o6d_A 95 KDITILIGGPYGL 107 (163)
T ss_dssp CCEEEEECCTTCC
T ss_pred CeEEEEEECCCCC
Confidence 4567999998433
No 37
>1ns5_A Hypothetical protein YBEA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.68A {Escherichia coli} SCOP: c.116.1.3
Probab=25.87 E-value=29 Score=28.76 Aligned_cols=12 Identities=25% Similarity=0.321 Sum_probs=8.9
Q ss_pred CCcEEEEeChhh
Q psy1579 108 IENVWVIGGSSI 119 (258)
Q Consensus 108 ~~~I~ViGGa~i 119 (258)
.+-+|||||+.-
T Consensus 96 ~~i~FvIGG~~G 107 (155)
T 1ns5_A 96 RDVSLLIGGPEG 107 (155)
T ss_dssp SCEEEEECBTTB
T ss_pred CeEEEEEECCCC
Confidence 456799999843
No 38
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=21.79 E-value=28 Score=31.53 Aligned_cols=73 Identities=19% Similarity=0.235 Sum_probs=39.7
Q ss_pred eEEEeccccccccCCCCCCCCCcEEEEcCcCCCC------CCCCCCcEEEe---------CCHHHHHHHHHhhccCCCCC
Q psy1579 45 AVIMGRKTWDSIPEKFRPLPGRYNVVLTRNSDLG------SQLTGPNVTTT---------SSLDQAIDLLRHKKSKGEIE 109 (258)
Q Consensus 45 aVIMGRKTweSip~~~rPL~~R~nvVlSr~~~~~------~~~~~~~v~v~---------~sl~~ai~~l~~~~~~~~~~ 109 (258)
-|+.|+-..+.+++..+.+..++-+|||.....+ ..+...++.+. ..++++++.+++. +.+
T Consensus 14 ~i~~G~g~~~~l~~~l~~~g~~r~liVtd~~~~~~~~~v~~~L~~~~~~v~~~v~~~p~~~~v~~~~~~~~~~----~~D 89 (353)
T 3hl0_A 14 RIVFSAGSSADVAEEIRRLGLSRALVLSTPQQKGDAEALASRLGRLAAGVFSEAAMHTPVEVTKTAVEAYRAA----GAD 89 (353)
T ss_dssp CEEECTTGGGGHHHHHHHTTCCCEEEECCGGGHHHHHHHHHHHGGGEEEEECCCCTTCBHHHHHHHHHHHHHT----TCS
T ss_pred eEEECcCHHHHHHHHHHHhCCCEEEEEecCchhhHHHHHHHHHhhCCcEEecCcCCCCcHHHHHHHHHHHhcc----CCC
Confidence 3677777777776544445445556666432211 00011122222 2356666777654 345
Q ss_pred cEEEEeChhhhc
Q psy1579 110 NVWVIGGSSIYK 121 (258)
Q Consensus 110 ~I~ViGGa~iy~ 121 (258)
-|.-+||+++..
T Consensus 90 ~IIavGGGs~iD 101 (353)
T 3hl0_A 90 CVVSLGGGSTTG 101 (353)
T ss_dssp EEEEEESHHHHH
T ss_pred EEEEeCCcHHHH
Confidence 677799999877
Done!