BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy158
(116 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VFM9|TWF_DROME Twinfilin OS=Drosophila melanogaster GN=twf PE=1 SV=1
Length = 343
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 72/105 (68%), Gaps = 16/105 (15%)
Query: 2 FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
+VF+YSMPGYS ++ERM+YSSCKAP L+ L LG+ + KKL+
Sbjct: 253 YVFVYSMPGYSCSVRERMMYSSCKAPFLDELAALGVEVVKKLE----------------I 296
Query: 62 NSGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKRITKPQA 106
+SGSELTE FL +ELHPKK RP F KPKGPPNRGAKR+T+P A
Sbjct: 297 DSGSELTEAFLQDELHPKKILHRPAFAKPKGPPNRGAKRLTRPTA 341
>sp|Q298X4|TWF_DROPS Twinfilin OS=Drosophila pseudoobscura pseudoobscura GN=twf PE=3
SV=2
Length = 345
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 73/109 (66%), Gaps = 16/109 (14%)
Query: 2 FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
+VF+YSMPGY+ ++ERM+YSSCKAP LE L LG+ + KKL+
Sbjct: 253 YVFVYSMPGYTCSVRERMMYSSCKAPFLEQLAALGVDVVKKLE----------------I 296
Query: 62 NSGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKRITKPQATPQF 110
++G+ELTE +LL+ELHPKK RP F KPKGPPNRGAKR+T+P Q
Sbjct: 297 DNGNELTEAYLLDELHPKKILHRPAFAKPKGPPNRGAKRLTRPSNEDQV 345
>sp|Q7QG28|TWF_ANOGA Twinfilin OS=Anopheles gambiae GN=twf PE=3 SV=2
Length = 343
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 70/105 (66%), Gaps = 16/105 (15%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYN 62
VF+YSMPGYS I+ERM+YSSCK P + G+ + KKL+ +
Sbjct: 254 VFVYSMPGYSCSIRERMMYSSCKGPFSATIEKHGIQVAKKLE----------------ID 297
Query: 63 SGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKRITKPQAT 107
+G+ELTEEFL EELHP+K RP+F KPKGPP+RGAKR+TKPQA
Sbjct: 298 NGAELTEEFLHEELHPRKLNLRPQFSKPKGPPSRGAKRLTKPQAV 342
>sp|Q17A58|TWF_AEDAE Twinfilin OS=Aedes aegypti GN=twf PE=3 SV=1
Length = 343
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 69/105 (65%), Gaps = 16/105 (15%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYN 62
VF+YSMPGY+ I+ERM+YSSCK P + G+ I KK++ +
Sbjct: 254 VFVYSMPGYTCSIRERMMYSSCKGPFSATIEKHGIEITKKIE----------------ID 297
Query: 63 SGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKRITKPQAT 107
+G ELTEEF+ EELHP+K RP+F KPKGPP+RGAKR+TKPQA
Sbjct: 298 NGEELTEEFIYEELHPRKLNLRPQFSKPKGPPSRGAKRLTKPQAV 342
>sp|Q56JV6|TWF1_BOVIN Twinfilin-1 OS=Bos taurus GN=TWF1 PE=2 SV=1
Length = 350
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 64/103 (62%), Gaps = 16/103 (15%)
Query: 2 FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
VFIYSMPGY+ I+ERMLYSSCK+PLLE ++++L + +K
Sbjct: 253 IVFIYSMPGYTCSIRERMLYSSCKSPLLE-------IVERQL--------QMDIIRKIEI 297
Query: 62 NSGSELTEEFLLEELHPKKTAERPKFDKPKGPPN-RGAKRITK 103
++G ELT +FL EE+HPK+ A + F KPKGP RG +RI +
Sbjct: 298 DNGDELTADFLYEEVHPKQHAHKQSFAKPKGPSGKRGIRRIIR 340
>sp|Q5I082|TWF1_XENTR Twinfilin-1 OS=Xenopus tropicalis GN=twf1 PE=2 SV=1
Length = 350
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 64/103 (62%), Gaps = 16/103 (15%)
Query: 2 FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
FVFIYSMPGY+ I+ERMLYSSCK+PLL+ I+ +L + +K
Sbjct: 253 FVFIYSMPGYTCSIRERMLYSSCKSPLLD-------VIENRL--------LMEIARKIEI 297
Query: 62 NSGSELTEEFLLEELHPKKTAERPKFDKPKGPPN-RGAKRITK 103
++G ELT +FL EE+HPK+ A + F KPKGP RG +R+ +
Sbjct: 298 DNGDELTPDFLYEEVHPKQHAHKQNFAKPKGPAGKRGIRRLIR 340
>sp|Q5R7N2|TWF1_PONAB Twinfilin-1 OS=Pongo abelii GN=TWF1 PE=2 SV=1
Length = 350
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 64/103 (62%), Gaps = 16/103 (15%)
Query: 2 FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
VFIYSMPGY+ I+ERMLYSSCK+PLLE ++++L + +K
Sbjct: 253 IVFIYSMPGYTCSIRERMLYSSCKSPLLE-------IVERQL--------QMGVIRKIEI 297
Query: 62 NSGSELTEEFLLEELHPKKTAERPKFDKPKGPPN-RGAKRITK 103
++G ELT +FL EE+HPK+ A + F KPKGP RG +R+ +
Sbjct: 298 DNGDELTADFLYEEVHPKQHAHKQSFAKPKGPAGKRGIRRLIR 340
>sp|Q68F50|TWF1_XENLA Twinfilin-1 OS=Xenopus laevis GN=twf1 PE=2 SV=1
Length = 350
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 65/104 (62%), Gaps = 18/104 (17%)
Query: 2 FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHH-LGLTIDKKLKKKKKKKKKKKKKKKFP 60
FVFIYSMPGY+ I+ERMLYSSCK PLL+ + + L + I +K++
Sbjct: 253 FVFIYSMPGYTCSIRERMLYSSCKNPLLDAIENRLLMEIARKIE---------------- 296
Query: 61 YNSGSELTEEFLLEELHPKKTAERPKFDKPKGPPN-RGAKRITK 103
++G ELT +FL EE+HPK+ A + F KPKGP RG +R+ +
Sbjct: 297 IDNGDELTPDFLYEEVHPKQHAHKQNFAKPKGPAGKRGIRRLIR 340
>sp|Q6GMH3|TWF2_DANRE Twinfilin-2 OS=Danio rerio GN=twf2 PE=2 SV=1
Length = 347
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 62/102 (60%), Gaps = 16/102 (15%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYN 62
VFIYSMPGYS IKERMLYSSCK+ LL+ + ++ + KK +
Sbjct: 252 VFIYSMPGYSCSIKERMLYSSCKSRLLDEV---------------ERDFHLEVAKKLEID 296
Query: 63 SGSELTEEFLLEELHPKKTAERPKFDKPKGPPN-RGAKRITK 103
SG ELTEE+L +E+HPK+ A + F KP+GP RG KR+ K
Sbjct: 297 SGEELTEEYLYDEVHPKQHAHKQAFAKPRGPAGKRGNKRLIK 338
>sp|Q91YR1|TWF1_MOUSE Twinfilin-1 OS=Mus musculus GN=Twf1 PE=1 SV=2
Length = 350
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 64/102 (62%), Gaps = 16/102 (15%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYN 62
VFIYSMPGY+ I+ERMLYSSCK+PLLE ++++L + +K +
Sbjct: 254 VFIYSMPGYTCSIRERMLYSSCKSPLLE-------IVERQL--------QMDVIRKIEID 298
Query: 63 SGSELTEEFLLEELHPKKTAERPKFDKPKGPPN-RGAKRITK 103
+G ELT +FL +E+HPK+ A + F KPKGP RG +R+ +
Sbjct: 299 NGDELTADFLYDEVHPKQHAHKQSFAKPKGPAGKRGIRRLIR 340
>sp|Q5RJR2|TWF1_RAT Twinfilin-1 OS=Rattus norvegicus GN=Twf1 PE=2 SV=1
Length = 350
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 16/103 (15%)
Query: 2 FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
VFIYSMPGY+ I+ERMLYSSCK+PLL+ ++++L + +K
Sbjct: 253 IVFIYSMPGYTCSIRERMLYSSCKSPLLD-------IVERQL--------QMDVIRKIEI 297
Query: 62 NSGSELTEEFLLEELHPKKTAERPKFDKPKGPPN-RGAKRITK 103
++G ELT +FL +E+HPK+ A + F KPKGP RG +R+ +
Sbjct: 298 DNGDELTADFLYDEVHPKQHAHKQSFAKPKGPAGKRGIRRLIR 340
>sp|Q12792|TWF1_HUMAN Twinfilin-1 OS=Homo sapiens GN=TWF1 PE=1 SV=3
Length = 350
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 16/103 (15%)
Query: 2 FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
VFIYSMPGY+ I+ERMLYSSCK+ LLE ++++L + +K
Sbjct: 253 IVFIYSMPGYTCSIRERMLYSSCKSRLLE-------IVERQL--------QMDVIRKIEI 297
Query: 62 NSGSELTEEFLLEELHPKKTAERPKFDKPKGPPN-RGAKRITK 103
++G ELT +FL EE+HPK+ A + F KPKGP RG +R+ +
Sbjct: 298 DNGDELTADFLYEEVHPKQHAHKQSFAKPKGPAGKRGIRRLIR 340
>sp|Q5ZM35|TWF2_CHICK Twinfilin-2 OS=Gallus gallus GN=TWF2 PE=1 SV=1
Length = 349
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 61/103 (59%), Gaps = 18/103 (17%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENL-HHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
VFIYSMPGY IKERMLYSSCK+ LL+ + L I KK++
Sbjct: 254 VFIYSMPGYKCSIKERMLYSSCKSRLLDTVEQEFCLEIAKKIE----------------I 297
Query: 62 NSGSELTEEFLLEELHPKKTAERPKFDKPKGPPN-RGAKRITK 103
+ G+ELT EFL +E+HPK+ A + F KPKGP RG KR+ K
Sbjct: 298 DDGAELTAEFLYDEVHPKQHAFKQAFAKPKGPVGKRGQKRLIK 340
>sp|Q640W2|TWF2B_XENLA Twinfilin-2-B OS=Xenopus laevis GN=twf2-b PE=2 SV=1
Length = 349
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 59/102 (57%), Gaps = 16/102 (15%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYN 62
VFIYSMPGY IKERMLYSSCK LL+++ L + KK
Sbjct: 254 VFIYSMPGYKCSIKERMLYSSCKNRLLDSVEQDFLM---------------EIAKKIEIE 298
Query: 63 SGSELTEEFLLEELHPKKTAERPKFDKPKGPPN-RGAKRITK 103
G+ELT+EFL +E+HPK+ A + F KPKGP RG KR+ K
Sbjct: 299 DGAELTDEFLYDEVHPKQHAFKQAFAKPKGPAGKRGQKRLIK 340
>sp|Q7ZXP0|TWF2A_XENLA Twinfilin-2-A OS=Xenopus laevis GN=twf2-a PE=2 SV=1
Length = 349
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 16/102 (15%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYN 62
VFIYSMPGY IKERMLYSSCK LL+++ ++ + + KK
Sbjct: 254 VFIYSMPGYKCSIKERMLYSSCKNRLLDSV---------------EQDFQLEIAKKIEIE 298
Query: 63 SGSELTEEFLLEELHPKKTAERPKFDKPKGPPN-RGAKRITK 103
G+ELT+EFL +E+HPK+ A + F KPKGP RG KR+ K
Sbjct: 299 DGAELTDEFLYDEVHPKQHAFKQAFAKPKGPAGKRGQKRLIK 340
>sp|Q9Z0P5|TWF2_MOUSE Twinfilin-2 OS=Mus musculus GN=Twf2 PE=1 SV=1
Length = 349
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 16/102 (15%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYN 62
VFIYSMPGY IKERMLYSSCK+ LL+++ ++ + + KK
Sbjct: 254 VFIYSMPGYKCSIKERMLYSSCKSRLLDSV---------------EQDFQLEIAKKIEIG 298
Query: 63 SGSELTEEFLLEELHPKKTAERPKFDKPKGPPN-RGAKRITK 103
G+ELT EFL +E+HPK+ A + F KPKGP RG KR+ +
Sbjct: 299 DGAELTAEFLYDEVHPKQHAFKQAFAKPKGPGGKRGHKRLIR 340
>sp|Q6IBS0|TWF2_HUMAN Twinfilin-2 OS=Homo sapiens GN=TWF2 PE=1 SV=2
Length = 349
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 60/105 (57%), Gaps = 22/105 (20%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLH---HLGLTIDKKLKKKKKKKKKKKKKKKF 59
VFIYSMPGY IKERMLYSSCK+ LL+++ HL + KK
Sbjct: 254 VFIYSMPGYKCSIKERMLYSSCKSRLLDSVEQDFHLEIA------------------KKI 295
Query: 60 PYNSGSELTEEFLLEELHPKKTAERPKFDKPKGPPN-RGAKRITK 103
G+ELT EFL +E+HPK+ A + F KPKGP RG KR+ +
Sbjct: 296 EIGDGAELTAEFLYDEVHPKQHAFKQAFAKPKGPGGKRGHKRLIR 340
>sp|Q5RFH1|TWF2_PONAB Twinfilin-2 (Fragment) OS=Pongo abelii GN=TWF2 PE=3 SV=1
Length = 341
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 60/105 (57%), Gaps = 22/105 (20%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLH---HLGLTIDKKLKKKKKKKKKKKKKKKF 59
VFIYSMPGY I+ERMLYSSCK+ LL+++ HL + KK
Sbjct: 246 VFIYSMPGYKCSIEERMLYSSCKSRLLDSVEQDFHLEIA------------------KKI 287
Query: 60 PYNSGSELTEEFLLEELHPKKTAERPKFDKPKGPPN-RGAKRITK 103
G+ELT EFL +E+HPK+ A + F KPKGP RG KR+ +
Sbjct: 288 EIGDGAELTAEFLYDEVHPKQHAFKQAFAKPKGPGGKRGHKRLIR 332
>sp|Q869T1|TWF_DICDI Twinfilin OS=Dictyostelium discoideum GN=twfA PE=1 SV=1
Length = 335
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 21/97 (21%)
Query: 2 FVFIYSMPGYS-----LPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKK 56
++IYS P S P+++RML+SS KA + + + + ID KL+
Sbjct: 252 IIYIYSCPDGSNGTKSAPVRKRMLFSSSKANVEQLVTSHNVKIDLKLE------------ 299
Query: 57 KKFPYNSGSELTEEFLLEELHPKKTAERPKFDKPKGP 93
NS SE++EE ++ ELHP K E+ F KP P
Sbjct: 300 ----INSPSEISEESIINELHPPKVEEKKAFSKPSRP 332
>sp|O94399|TWF1_SCHPO Twinfilin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=twf1 PE=1 SV=1
Length = 328
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 2 FVFIYSMPGYSLPIKERMLYSSCKAPLLENL-HHLGLTIDKKLKKKKKKKKKKKK 55
+FIY P + +K RM+YSS K LL+++ LG+ ID K++ +K+
Sbjct: 245 ILFIYICPMQA-TVKHRMVYSSSKLGLLDSIKAELGIVIDGKIESNDAADITEKE 298
>sp|B1XI09|IF2_SYNP2 Translation initiation factor IF-2 OS=Synechococcus sp. (strain
ATCC 27264 / PCC 7002 / PR-6) GN=infB PE=3 SV=1
Length = 979
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 36/68 (52%)
Query: 41 KKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKR 100
K + ++KKK++ + P + + ++ + HP TA++ + K + PP+RG +
Sbjct: 61 KAQRPQRKKKQEILSVQHQPQGAKPQASKSESADANHPTSTAKKLERPKLQSPPSRGKET 120
Query: 101 ITKPQATP 108
+P+ +P
Sbjct: 121 PAQPEESP 128
>sp|O97592|DMD_CANFA Dystrophin OS=Canis familiaris GN=DMD PE=2 SV=1
Length = 3680
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 5 IYSMPGYSLP--IKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYN 62
IY+ P + P IKE + K P +E + L+ + L K+K + K+K + +
Sbjct: 2348 IYNQPNQTGPFDIKEIEVAVQAKQPDVEGI----LSKGQHLYKEKPATQPAKRKLEDLSS 2403
Query: 63 SGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKRITKPQATPQ 109
+T+ LL+EL K+ P + PP++ +T+P T +
Sbjct: 2404 DWKVVTQ--LLQELRAKQPGPAPGLTTVRAPPSQTVTLVTQPAVTKE 2448
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.134 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,095,332
Number of Sequences: 539616
Number of extensions: 2239684
Number of successful extensions: 30425
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 206
Number of HSP's that attempted gapping in prelim test: 21935
Number of HSP's gapped (non-prelim): 4408
length of query: 116
length of database: 191,569,459
effective HSP length: 84
effective length of query: 32
effective length of database: 146,241,715
effective search space: 4679734880
effective search space used: 4679734880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)