Your job contains 1 sequence.
>psy158
MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFP
YNSGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKRITKPQATPQFVKKLVD
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy158
(116 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0038206 - symbol:twf "twinfilin" species:7227 "Dro... 135 3.4e-20 2
UNIPROTKB|Q298X4 - symbol:twf "Twinfilin" species:46245 "... 135 2.4e-19 2
UNIPROTKB|Q56JV6 - symbol:TWF1 "Twinfilin-1" species:9913... 124 1.1e-12 2
UNIPROTKB|E1C198 - symbol:TWF1 "Uncharacterized protein" ... 124 1.7e-12 2
UNIPROTKB|J9NRP8 - symbol:TWF1 "Uncharacterized protein" ... 124 1.7e-12 2
UNIPROTKB|F1SGZ8 - symbol:TWF1 "Uncharacterized protein" ... 124 1.7e-12 2
MGI|MGI:1100520 - symbol:Twf1 "twinfilin, actin-binding p... 124 1.7e-12 2
UNIPROTKB|F1PFK0 - symbol:TWF1 "Uncharacterized protein" ... 124 1.8e-12 2
ZFIN|ZDB-GENE-030131-4402 - symbol:twf1a "twinfilin, acti... 120 2.3e-12 2
RGD|1311872 - symbol:Twf1 "twinfilin, actin-binding prote... 121 3.6e-12 2
ZFIN|ZDB-GENE-040711-3 - symbol:twf1b "twinfilin, actin-b... 158 6.4e-11 1
ZFIN|ZDB-GENE-030131-7638 - symbol:twf2a "twinfilin, acti... 142 3.1e-09 1
UNIPROTKB|Q12792 - symbol:TWF1 "Twinfilin-1" species:9606... 139 6.6e-09 1
UNIPROTKB|F1SIY3 - symbol:TWF2 "Uncharacterized protein" ... 132 7.6e-09 1
ZFIN|ZDB-GENE-030131-333 - symbol:wdr82 "WD repeat domain... 142 8.1e-09 1
UNIPROTKB|F1NZP0 - symbol:TWF2 "Twinfilin-2" species:9031... 136 1.3e-08 1
UNIPROTKB|Q5ZM35 - symbol:TWF2 "Twinfilin-2" species:9031... 136 1.4e-08 1
UNIPROTKB|E1BRZ6 - symbol:TWF2 "Twinfilin-2" species:9031... 136 3.6e-08 1
UNIPROTKB|E2RGD3 - symbol:TWF2 "Uncharacterized protein" ... 132 3.9e-08 1
UNIPROTKB|Q6IBS0 - symbol:TWF2 "Twinfilin-2" species:9606... 132 3.9e-08 1
UNIPROTKB|F1SIX7 - symbol:TWF2 "Uncharacterized protein" ... 132 3.9e-08 1
MGI|MGI:1346078 - symbol:Twf2 "twinfilin, actin-binding p... 132 3.9e-08 1
ZFIN|ZDB-GENE-050522-238 - symbol:twf2b "twinfilin, actin... 132 4.3e-08 1
WB|WBGene00018187 - symbol:F38E9.5 species:6239 "Caenorha... 94 7.6e-08 2
UNIPROTKB|A2VDX0 - symbol:TWF2 "TWF2 protein" species:991... 126 1.8e-07 1
UNIPROTKB|F1MG94 - symbol:WDR82 "Uncharacterized protein"... 126 4.2e-07 1
UNIPROTKB|H0Y858 - symbol:H0Y858 "Uncharacterized protein... 116 1.2e-05 1
CGD|CAL0006222 - symbol:orf19.2228 species:5476 "Candida ... 68 0.00083 2
>FB|FBgn0038206 [details] [associations]
symbol:twf "twinfilin" species:7227 "Drosophila melanogaster"
[GO:0004713 "protein tyrosine kinase activity" evidence=ISS]
[GO:0030042 "actin filament depolymerization" evidence=IDA]
[GO:0008407 "chaeta morphogenesis" evidence=IMP] [GO:0003779 "actin
binding" evidence=IEA;NAS] [GO:0010591 "regulation of lamellipodium
assembly" evidence=IMP] [GO:0016319 "mushroom body development"
evidence=IMP] [GO:0007298 "border follicle cell migration"
evidence=IMP] [GO:0007274 "neuromuscular synaptic transmission"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0048488
"synaptic vesicle endocytosis" evidence=IMP] InterPro:IPR002108
Pfam:PF00241 PROSITE:PS51263 SMART:SM00102 EMBL:AE014297
GO:GO:0005886 GO:GO:0005938 GO:GO:0005737 GO:GO:0003779
GO:GO:0005856 GO:GO:0007274 GO:GO:0030042 GO:GO:0007298
GO:GO:0016319 GO:GO:0048488 GO:GO:0030833 GO:GO:0008407
GO:GO:0010591 eggNOG:NOG263290 GeneTree:ENSGT00530000063868
KO:K08870 OMA:VIRKIEI HSSP:Q91YR1 EMBL:AJ430055 EMBL:AY069613
RefSeq:NP_650338.1 UniGene:Dm.2042 ProteinModelPortal:Q9VFM9
SMR:Q9VFM9 STRING:Q9VFM9 PaxDb:Q9VFM9 PRIDE:Q9VFM9
EnsemblMetazoa:FBtr0082891 GeneID:41719 KEGG:dme:Dmel_CG3172
UCSC:CG3172-RA CTD:41719 FlyBase:FBgn0038206 InParanoid:Q9VFM9
OrthoDB:EOG4DV42T PhylomeDB:Q9VFM9 GenomeRNAi:41719 NextBio:825221
Bgee:Q9VFM9 Uniprot:Q9VFM9
Length = 343
Score = 135 (52.6 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 2 FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTI 39
+VF+YSMPGYS ++ERM+YSSCKAP L+ L LG+ +
Sbjct: 253 YVFVYSMPGYSCSVRERMMYSSCKAPFLDELAALGVEV 290
Score = 131 (51.2 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 25/45 (55%), Positives = 28/45 (62%)
Query: 62 NSGSXXXXXXXXXXXHPKKTAERPKFDKPKGPPNRGAKRITKPQA 106
+SGS HPKK RP F KPKGPPNRGAKR+T+P A
Sbjct: 297 DSGSELTEAFLQDELHPKKILHRPAFAKPKGPPNRGAKRLTRPTA 341
Score = 39 (18.8 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 7/14 (50%), Positives = 12/14 (85%)
Query: 15 IKERMLYSSCKAPL 28
I+++M+Y+S KA L
Sbjct: 95 IRQKMVYASTKATL 108
>UNIPROTKB|Q298X4 [details] [associations]
symbol:twf "Twinfilin" species:46245 "Drosophila
pseudoobscura pseudoobscura" [GO:0003779 "actin binding"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISS] [GO:0030833 "regulation of actin
filament polymerization" evidence=ISS] InterPro:IPR002108
Pfam:PF00241 PROSITE:PS51263 SMART:SM00102 GO:GO:0005886
GO:GO:0005938 GO:GO:0005737 GO:GO:0003779 GO:GO:0005856
EMBL:CM000070 GO:GO:0030833 GenomeReviews:CM000070_GR
eggNOG:NOG263290 KO:K08870 OrthoDB:EOG4DV42T RefSeq:XP_001358688.2
ProteinModelPortal:Q298X4 GeneID:4801632 KEGG:dpo:Dpse_GA16421
FlyBase:FBgn0076436 InParanoid:Q298X4 Uniprot:Q298X4
Length = 345
Score = 135 (52.6 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 2 FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTI 39
+VF+YSMPGY+ ++ERM+YSSCKAP LE L LG+ +
Sbjct: 253 YVFVYSMPGYTCSVRERMMYSSCKAPFLEQLAALGVDV 290
Score = 123 (48.4 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 77 HPKKTAERPKFDKPKGPPNRGAKRITKPQATPQ 109
HPKK RP F KPKGPPNRGAKR+T+P Q
Sbjct: 312 HPKKILHRPAFAKPKGPPNRGAKRLTRPSNEDQ 344
Score = 39 (18.8 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 7/14 (50%), Positives = 12/14 (85%)
Query: 15 IKERMLYSSCKAPL 28
I+++M+Y+S KA L
Sbjct: 95 IRQKMVYASTKATL 108
>UNIPROTKB|Q56JV6 [details] [associations]
symbol:TWF1 "Twinfilin-1" species:9913 "Bos taurus"
[GO:0051016 "barbed-end actin filament capping" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0043538 "regulation of actin phosphorylation" evidence=IEA]
[GO:0042989 "sequestering of actin monomers" evidence=IEA]
[GO:0032587 "ruffle membrane" evidence=IEA] [GO:0030175
"filopodium" evidence=IEA] [GO:0030016 "myofibril" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0005911
"cell-cell junction" evidence=IEA] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0003785 "actin monomer
binding" evidence=IEA] InterPro:IPR002108 Pfam:PF00241
PROSITE:PS51263 SMART:SM00102 GO:GO:0005524 GO:GO:0048471
GO:GO:0015629 GO:GO:0005911 GO:GO:0030175 GO:GO:0004713
GO:GO:0030016 GO:GO:0032587 GO:GO:0005546 GO:GO:0051016
GO:GO:0042989 EMBL:AY911376 IPI:IPI00708850 RefSeq:NP_001020491.1
UniGene:Bt.5944 ProteinModelPortal:Q56JV6 SMR:Q56JV6 PRIDE:Q56JV6
Ensembl:ENSBTAT00000027889 GeneID:506683 KEGG:bta:506683 CTD:5756
eggNOG:NOG263290 GeneTree:ENSGT00530000063868 HOGENOM:HOG000168296
HOVERGEN:HBG000848 InParanoid:Q56JV6 KO:K08870 OMA:VIRKIEI
OrthoDB:EOG4TTGJJ NextBio:20867714 GO:GO:0043538 Uniprot:Q56JV6
Length = 350
Score = 124 (48.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 23/28 (82%), Positives = 26/28 (92%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLE 30
VFIYSMPGY+ I+ERMLYSSCK+PLLE
Sbjct: 254 VFIYSMPGYTCSIRERMLYSSCKSPLLE 281
Score = 71 (30.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 77 HPKKTAERPKFDKPKGPPN-RGAKRITKPQA 106
HPK+ A + F KPKGP RG +RI + A
Sbjct: 313 HPKQHAHKQSFAKPKGPSGKRGIRRIIRGPA 343
Score = 44 (20.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 2 FVFIYSMPGYSLPIKERMLYSSCKAPL 28
++FI P +S ++++MLY++ +A L
Sbjct: 83 WIFIAWSPDHS-HVRQKMLYAATRATL 108
>UNIPROTKB|E1C198 [details] [associations]
symbol:TWF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003785 "actin monomer binding" evidence=IEA]
[GO:0004713 "protein tyrosine kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA]
[GO:0005911 "cell-cell junction" evidence=IEA] [GO:0015629 "actin
cytoskeleton" evidence=IEA] [GO:0030016 "myofibril" evidence=IEA]
[GO:0030175 "filopodium" evidence=IEA] [GO:0032587 "ruffle
membrane" evidence=IEA] [GO:0042989 "sequestering of actin
monomers" evidence=IEA] [GO:0043538 "regulation of actin
phosphorylation" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0051016 "barbed-end actin filament
capping" evidence=IEA] InterPro:IPR002108 Pfam:PF00241
PROSITE:PS51263 SMART:SM00102 GO:GO:0005524 GO:GO:0048471
GO:GO:0015629 GO:GO:0005911 GO:GO:0030175 GO:GO:0004713
GO:GO:0030016 GO:GO:0032587 GO:GO:0005546 GO:GO:0051016
GO:GO:0042989 GeneTree:ENSGT00530000063868 OMA:VIRKIEI
GO:GO:0043538 EMBL:AADN02010019 EMBL:AADN02010020 IPI:IPI00819608
ProteinModelPortal:E1C198 Ensembl:ENSGALT00000015635 Uniprot:E1C198
Length = 350
Score = 124 (48.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 23/28 (82%), Positives = 26/28 (92%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLE 30
VFIYSMPGY+ I+ERMLYSSCK+PLLE
Sbjct: 254 VFIYSMPGYTCSIRERMLYSSCKSPLLE 281
Score = 69 (29.3 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 77 HPKKTAERPKFDKPKGPPN-RGAKRITKPQA 106
HPK+ A + F KPKGP RG +R+ + A
Sbjct: 313 HPKQHAHKQSFAKPKGPAGKRGIRRLIRGPA 343
Score = 53 (23.7 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 10/27 (37%), Positives = 20/27 (74%)
Query: 2 FVFIYSMPGYSLPIKERMLYSSCKAPL 28
++FI P +S P++++MLY++ +A L
Sbjct: 83 WIFIAWSPDHS-PVRQKMLYAATRATL 108
>UNIPROTKB|J9NRP8 [details] [associations]
symbol:TWF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] InterPro:IPR002108
Pfam:PF00241 PROSITE:PS51263 SMART:SM00102 GO:GO:0005622 CTD:5756
GeneTree:ENSGT00530000063868 KO:K08870 EMBL:AAEX03015123
GeneID:486600 KEGG:cfa:486600 RefSeq:XP_543726.2
Ensembl:ENSCAFT00000049290 Uniprot:J9NRP8
Length = 350
Score = 124 (48.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 23/28 (82%), Positives = 26/28 (92%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLE 30
VFIYSMPGY+ I+ERMLYSSCK+PLLE
Sbjct: 254 VFIYSMPGYTCSIRERMLYSSCKSPLLE 281
Score = 69 (29.3 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 77 HPKKTAERPKFDKPKGPPN-RGAKRITKPQA 106
HPK+ A + F KPKGP RG +R+ + A
Sbjct: 313 HPKQHAHKQSFAKPKGPAGKRGIRRLIRGPA 343
Score = 44 (20.5 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 2 FVFIYSMPGYSLPIKERMLYSSCKAPL 28
++FI P +S ++++MLY++ +A L
Sbjct: 83 WIFIAWSPDHS-HVRQKMLYAATRATL 108
>UNIPROTKB|F1SGZ8 [details] [associations]
symbol:TWF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051016 "barbed-end actin filament capping"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043538 "regulation of actin phosphorylation"
evidence=IEA] [GO:0042989 "sequestering of actin monomers"
evidence=IEA] [GO:0032587 "ruffle membrane" evidence=IEA]
[GO:0030175 "filopodium" evidence=IEA] [GO:0030016 "myofibril"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0005911 "cell-cell junction" evidence=IEA] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0003785 "actin monomer
binding" evidence=IEA] InterPro:IPR002108 Pfam:PF00241
PROSITE:PS51263 SMART:SM00102 GO:GO:0005524 GO:GO:0048471
GO:GO:0015629 GO:GO:0005911 GO:GO:0030175 GO:GO:0004713
GO:GO:0030016 GO:GO:0032587 GO:GO:0005546 GO:GO:0051016
GO:GO:0042989 GeneTree:ENSGT00530000063868 KO:K08870 OMA:VIRKIEI
GO:GO:0043538 EMBL:FP102342 RefSeq:XP_003481764.1
Ensembl:ENSSSCT00000000865 GeneID:100523377 KEGG:ssc:100523377
Uniprot:F1SGZ8
Length = 350
Score = 124 (48.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 23/28 (82%), Positives = 26/28 (92%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLE 30
VFIYSMPGY+ I+ERMLYSSCK+PLLE
Sbjct: 254 VFIYSMPGYTCSIRERMLYSSCKSPLLE 281
Score = 69 (29.3 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 77 HPKKTAERPKFDKPKGPPN-RGAKRITKPQA 106
HPK+ A + F KPKGP RG +R+ + A
Sbjct: 313 HPKQHAHKQSFAKPKGPSGKRGIRRLIRGPA 343
Score = 44 (20.5 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 2 FVFIYSMPGYSLPIKERMLYSSCKAPL 28
++FI P +S ++++MLY++ +A L
Sbjct: 83 WIFIAWSPDHS-HVRQKMLYAATRATL 108
>MGI|MGI:1100520 [details] [associations]
symbol:Twf1 "twinfilin, actin-binding protein, homolog 1
(Drosophila)" species:10090 "Mus musculus" [GO:0003779 "actin
binding" evidence=IEA] [GO:0003785 "actin monomer binding"
evidence=IDA] [GO:0004713 "protein tyrosine kinase activity"
evidence=IDA] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IDA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005911
"cell-cell junction" evidence=IDA] [GO:0006468 "protein
phosphorylation" evidence=IDA] [GO:0015629 "actin cytoskeleton"
evidence=IDA] [GO:0030016 "myofibril" evidence=IDA] [GO:0030175
"filopodium" evidence=IDA] [GO:0030837 "negative regulation of
actin filament polymerization" evidence=IDA] [GO:0032587 "ruffle
membrane" evidence=IDA] [GO:0042989 "sequestering of actin
monomers" evidence=IDA] [GO:0043538 "regulation of actin
phosphorylation" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0051016 "barbed-end actin filament
capping" evidence=IDA] InterPro:IPR002108 Pfam:PF00241
PROSITE:PS51263 SMART:SM00102 EMBL:U82324 MGI:MGI:1100520
GO:GO:0005524 GO:GO:0048471 GO:GO:0015629 GO:GO:0005911
GO:GO:0030175 GO:GO:0003785 GO:GO:0004713 GO:GO:0030016 PDB:3DAW
PDBsum:3DAW GO:GO:0005546 GO:GO:0051016 GO:GO:0042989 CTD:5756
eggNOG:NOG263290 GeneTree:ENSGT00530000063868 HOGENOM:HOG000168296
HOVERGEN:HBG000848 KO:K08870 OMA:VIRKIEI OrthoDB:EOG4TTGJJ
GO:GO:0043538 EMBL:AY267188 EMBL:AK147990 EMBL:AK150852
EMBL:BC015081 EMBL:BC094034 IPI:IPI00314844 RefSeq:NP_032997.3
UniGene:Mm.490250 PDB:1M4J PDB:2D8B PDB:2HD7 PDBsum:1M4J
PDBsum:2D8B PDBsum:2HD7 ProteinModelPortal:Q91YR1 SMR:Q91YR1
IntAct:Q91YR1 STRING:Q91YR1 PhosphoSite:Q91YR1 PaxDb:Q91YR1
PRIDE:Q91YR1 Ensembl:ENSMUST00000023087 GeneID:19230 KEGG:mmu:19230
UCSC:uc007xjl.1 InParanoid:Q91YR1 ChiTaRS:TWF1
EvolutionaryTrace:Q91YR1 NextBio:296036 Bgee:Q91YR1
Genevestigator:Q91YR1 GermOnline:ENSMUSG00000022451 Uniprot:Q91YR1
Length = 350
Score = 124 (48.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 23/28 (82%), Positives = 26/28 (92%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLE 30
VFIYSMPGY+ I+ERMLYSSCK+PLLE
Sbjct: 254 VFIYSMPGYTCSIRERMLYSSCKSPLLE 281
Score = 69 (29.3 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 77 HPKKTAERPKFDKPKGPPN-RGAKRITKPQA 106
HPK+ A + F KPKGP RG +R+ + A
Sbjct: 313 HPKQHAHKQSFAKPKGPAGKRGIRRLIRGPA 343
Score = 44 (20.5 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 2 FVFIYSMPGYSLPIKERMLYSSCKAPL 28
++FI P +S ++++MLY++ +A L
Sbjct: 83 WIFIAWSPDHS-HVRQKMLYAATRATL 108
>UNIPROTKB|F1PFK0 [details] [associations]
symbol:TWF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] InterPro:IPR002108
Pfam:PF00241 PROSITE:PS51263 SMART:SM00102 GO:GO:0005622 CTD:5756
GeneTree:ENSGT00530000063868 KO:K08870 OMA:VIRKIEI
EMBL:AAEX03015123 RefSeq:XP_003433603.1 Ensembl:ENSCAFT00000015336
GeneID:486600 KEGG:cfa:486600 Uniprot:F1PFK0
Length = 357
Score = 124 (48.7 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 23/28 (82%), Positives = 26/28 (92%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLE 30
VFIYSMPGY+ I+ERMLYSSCK+PLLE
Sbjct: 261 VFIYSMPGYTCSIRERMLYSSCKSPLLE 288
Score = 69 (29.3 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 77 HPKKTAERPKFDKPKGPPN-RGAKRITKPQA 106
HPK+ A + F KPKGP RG +R+ + A
Sbjct: 320 HPKQHAHKQSFAKPKGPAGKRGIRRLIRGPA 350
Score = 44 (20.5 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 2 FVFIYSMPGYSLPIKERMLYSSCKAPL 28
++FI P +S ++++MLY++ +A L
Sbjct: 83 WIFIAWSPDHS-HVRQKMLYAATRATL 108
>ZFIN|ZDB-GENE-030131-4402 [details] [associations]
symbol:twf1a "twinfilin, actin-binding protein,
homolog 1a" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002108 Pfam:PF00241
PROSITE:PS51263 SMART:SM00102 ZFIN:ZDB-GENE-030131-4402
GO:GO:0005622 HOVERGEN:HBG000848 KO:K08870 EMBL:BC058050
IPI:IPI00505709 RefSeq:NP_956019.1 UniGene:Dr.78140
ProteinModelPortal:Q6PEI5 SMR:Q6PEI5 GeneID:325677 KEGG:dre:325677
CTD:325677 NextBio:20809419 Uniprot:Q6PEI5
Length = 350
Score = 120 (47.3 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 23/28 (82%), Positives = 25/28 (89%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLE 30
VFIYSMPGYS I+ERMLYSSCK PLL+
Sbjct: 254 VFIYSMPGYSCGIRERMLYSSCKNPLLD 281
Score = 72 (30.4 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 77 HPKKTAERPKFDKPKGPPNR-GAKRITK 103
HPK+ A + F KP+GP R G +RIT+
Sbjct: 313 HPKQHAHKQAFAKPRGPQGRRGERRITR 340
Score = 49 (22.3 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 2 FVFIYSMPGYSLPIKERMLYSSCKAPL 28
++FI P +S P++ +MLY++ +A +
Sbjct: 83 WIFIAWSPDHS-PVRHKMLYAATRATI 108
>RGD|1311872 [details] [associations]
symbol:Twf1 "twinfilin, actin-binding protein, homolog 1
(Drosophila)" species:10116 "Rattus norvegicus" [GO:0003785 "actin
monomer binding" evidence=IEA;ISO] [GO:0004713 "protein tyrosine
kinase activity" evidence=IEA;ISO] [GO:0005524 "ATP binding"
evidence=IEA;ISO] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005911 "cell-cell
junction" evidence=IEA;ISO] [GO:0006468 "protein phosphorylation"
evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=IEA;ISO]
[GO:0030016 "myofibril" evidence=IEA;ISO] [GO:0030175 "filopodium"
evidence=IEA;ISO] [GO:0030837 "negative regulation of actin
filament polymerization" evidence=ISO] [GO:0032587 "ruffle
membrane" evidence=IEA;ISO] [GO:0042989 "sequestering of actin
monomers" evidence=IEA;ISO] [GO:0043538 "regulation of actin
phosphorylation" evidence=IEA;ISO] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA;ISO] [GO:0051016 "barbed-end actin
filament capping" evidence=IEA;ISO] InterPro:IPR002108 Pfam:PF00241
PROSITE:PS51263 SMART:SM00102 RGD:1311872 GO:GO:0005524
GO:GO:0048471 GO:GO:0015629 GO:GO:0005911 GO:GO:0030175
GO:GO:0004713 GO:GO:0030016 GO:GO:0032587 GO:GO:0005546
GO:GO:0051016 GO:GO:0042989 CTD:5756 eggNOG:NOG263290
GeneTree:ENSGT00530000063868 HOGENOM:HOG000168296
HOVERGEN:HBG000848 KO:K08870 OMA:VIRKIEI OrthoDB:EOG4TTGJJ
GO:GO:0043538 EMBL:BC086536 IPI:IPI00361693 RefSeq:NP_001008521.1
UniGene:Rn.162971 ProteinModelPortal:Q5RJR2 SMR:Q5RJR2
PhosphoSite:Q5RJR2 PRIDE:Q5RJR2 Ensembl:ENSRNOT00000038032
GeneID:315265 KEGG:rno:315265 InParanoid:Q5RJR2 NextBio:668975
Genevestigator:Q5RJR2 GermOnline:ENSRNOG00000022507 Uniprot:Q5RJR2
Length = 350
Score = 121 (47.7 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 22/28 (78%), Positives = 26/28 (92%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLE 30
VFIYSMPGY+ I+ERMLYSSCK+PLL+
Sbjct: 254 VFIYSMPGYTCSIRERMLYSSCKSPLLD 281
Score = 69 (29.3 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 77 HPKKTAERPKFDKPKGPPN-RGAKRITKPQA 106
HPK+ A + F KPKGP RG +R+ + A
Sbjct: 313 HPKQHAHKQSFAKPKGPAGKRGIRRLIRGPA 343
Score = 44 (20.5 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 2 FVFIYSMPGYSLPIKERMLYSSCKAPL 28
++FI P +S ++++MLY++ +A L
Sbjct: 83 WIFIAWSPDHS-HVRQKMLYAATRATL 108
>ZFIN|ZDB-GENE-040711-3 [details] [associations]
symbol:twf1b "twinfilin, actin-binding protein,
homolog 1b" species:7955 "Danio rerio" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR002108 Pfam:PF00241 PROSITE:PS51263 SMART:SM00102
ZFIN:ZDB-GENE-040711-3 GO:GO:0005622 GeneTree:ENSGT00530000063868
EMBL:CR786571 IPI:IPI00482562 Ensembl:ENSDART00000129518
Bgee:F1RDA5 Uniprot:F1RDA5
Length = 375
Score = 158 (60.7 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 41/103 (39%), Positives = 52/103 (50%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLH-HLGLTIDXXXXXXXXXXXXXXXXXXFPY 61
VFIYSMPGY IKERMLYSSCK PL++ + +LG+ I
Sbjct: 280 VFIYSMPGYKCSIKERMLYSSCKNPLIDTVERNLGIEI----------------AKKLEI 323
Query: 62 NSGSXXXXXXXXXXXHPKKTAERPKFDKPKGPPN-RGAKRITK 103
++G HPK+ A + F KPKGP RG +RIT+
Sbjct: 324 DNGDELTSDFMYEEVHPKQHAHKQAFAKPKGPTGKRGGRRITR 366
>ZFIN|ZDB-GENE-030131-7638 [details] [associations]
symbol:twf2a "twinfilin, actin-binding protein,
homolog 2a (Drosophila)" species:7955 "Danio rerio" [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] InterPro:IPR002108 Pfam:PF00241
PROSITE:PS51263 SMART:SM00102 ZFIN:ZDB-GENE-030131-7638
GO:GO:0048471 GO:GO:0005856 eggNOG:COG2319
GeneTree:ENSGT00530000063868 HOGENOM:HOG000168296
HOVERGEN:HBG000848 KO:K08870 CTD:11344 EMBL:BC074077
IPI:IPI00482215 RefSeq:NP_001009897.1 UniGene:Dr.155497
ProteinModelPortal:Q6GMH3 SMR:Q6GMH3 PRIDE:Q6GMH3
Ensembl:ENSDART00000065006 GeneID:100310784 KEGG:dre:100310784
OMA:SHNAQGF Bgee:Q6GMH3 Uniprot:Q6GMH3
Length = 347
Score = 142 (55.0 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 39/102 (38%), Positives = 47/102 (46%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDXXXXXXXXXXXXXXXXXXFPYN 62
VFIYSMPGYS IKERMLYSSCK+ LL+ + +
Sbjct: 252 VFIYSMPGYSCSIKERMLYSSCKSRLLDEVER---------------DFHLEVAKKLEID 296
Query: 63 SGSXXXXXXXXXXXHPKKTAERPKFDKPKGPPN-RGAKRITK 103
SG HPK+ A + F KP+GP RG KR+ K
Sbjct: 297 SGEELTEEYLYDEVHPKQHAHKQAFAKPRGPAGKRGNKRLIK 338
>UNIPROTKB|Q12792 [details] [associations]
symbol:TWF1 "Twinfilin-1" species:9606 "Homo sapiens"
[GO:0051016 "barbed-end actin filament capping" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=ISS] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=ISS] [GO:0003785 "actin monomer binding" evidence=ISS]
[GO:0005546 "phosphatidylinositol-4,5-bisphosphate binding"
evidence=ISS] [GO:0005911 "cell-cell junction" evidence=ISS]
[GO:0030175 "filopodium" evidence=ISS] [GO:0032587 "ruffle
membrane" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0043538 "regulation of actin
phosphorylation" evidence=IDA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IDA] [GO:0005524 "ATP binding" evidence=IDA]
[GO:0042989 "sequestering of actin monomers" evidence=ISS]
[GO:0030016 "myofibril" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR002108 Pfam:PF00241 PROSITE:PS51263
SMART:SM00102 GO:GO:0005524 GO:GO:0048471 GO:GO:0015629
GO:GO:0005911 GO:GO:0030175 GO:GO:0003785 GO:GO:0030016
GO:GO:0032587 GO:GO:0005546 GO:GO:0051016 GO:GO:0042989 CTD:5756
eggNOG:NOG263290 HOVERGEN:HBG000848 KO:K08870 OrthoDB:EOG4TTGJJ
GO:GO:0043538 EMBL:U02680 EMBL:AK127868 EMBL:AK291223 EMBL:AK297206
EMBL:CR541736 EMBL:CR541761 EMBL:BT019691 EMBL:AB209302
EMBL:BC022344 EMBL:BC043148 EMBL:BC068548 IPI:IPI00815767
IPI:IPI00816829 IPI:IPI01022451 PIR:A55922 RefSeq:NP_001229326.1
RefSeq:NP_002813.3 UniGene:Hs.189075 UniGene:Hs.313056
ProteinModelPortal:Q12792 SMR:Q12792 IntAct:Q12792 STRING:Q12792
PhosphoSite:Q12792 DMDM:259016376 OGP:Q12792 PaxDb:Q12792
PRIDE:Q12792 DNASU:5756 Ensembl:ENST00000325127
Ensembl:ENST00000395510 Ensembl:ENST00000548315
Ensembl:ENST00000552521 GeneID:5756 KEGG:hsa:5756 UCSC:uc001rnz.3
UCSC:uc001rob.3 GeneCards:GC12M044187 HGNC:HGNC:9620 HPA:HPA018116
MIM:610932 neXtProt:NX_Q12792 PharmGKB:PA162407406 GenomeRNAi:5756
NextBio:22400 ArrayExpress:Q12792 Bgee:Q12792 Genevestigator:Q12792
GermOnline:ENSG00000151239 Uniprot:Q12792
Length = 350
Score = 139 (54.0 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 39/105 (37%), Positives = 51/105 (48%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDXXXXXXXXXXXXXXXXXXFPYN 62
VFIYSMPGY+ I+ERMLYSSCK+ LLE + L +D +
Sbjct: 254 VFIYSMPGYTCSIRERMLYSSCKSRLLEIVERQ-LQMDVIRK--------------IEID 298
Query: 63 SGSXXXXXXXXXXXHPKKTAERPKFDKPKGPPN-RGAKRITKPQA 106
+G HPK+ A + F KPKGP RG +R+ + A
Sbjct: 299 NGDELTADFLYEEVHPKQHAHKQSFAKPKGPAGKRGIRRLIRGPA 343
>UNIPROTKB|F1SIY3 [details] [associations]
symbol:TWF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071363 "cellular response to growth factor stimulus"
evidence=IEA] [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0051016 "barbed-end actin filament capping"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0042989 "sequestering of actin monomers"
evidence=IEA] [GO:0032420 "stereocilium" evidence=IEA] [GO:0030426
"growth cone" evidence=IEA] [GO:0030175 "filopodium" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0030016 "myofibril"
evidence=IEA] [GO:0010976 "positive regulation of neuron projection
development" evidence=IEA] [GO:0010592 "positive regulation of
lamellipodium assembly" evidence=IEA] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005080 "protein kinase
C binding" evidence=IEA] [GO:0003785 "actin monomer binding"
evidence=IEA] InterPro:IPR002108 Pfam:PF00241 PROSITE:PS51263
SMART:SM00102 GO:GO:0005524 GO:GO:0048471 GO:GO:0071363
GO:GO:0010976 GO:GO:0071300 GO:GO:0030027 GO:GO:0030175
GO:GO:0030426 GO:GO:0030016 GO:GO:0005546 GO:GO:0051016
GO:GO:0045773 GO:GO:0010592 GO:GO:0032420 GO:GO:0042989
GeneTree:ENSGT00530000063868 EMBL:CU914695
Ensembl:ENSSSCT00000012509 Uniprot:F1SIY3
Length = 168
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 37/102 (36%), Positives = 46/102 (45%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDXXXXXXXXXXXXXXXXXXFPYN 62
VFIYSMPGY IKERMLYSSCK+ LL+++
Sbjct: 73 VFIYSMPGYKCSIKERMLYSSCKSRLLDSVEQ---------------DFQLEIAKKIEIG 117
Query: 63 SGSXXXXXXXXXXXHPKKTAERPKFDKPKGPPN-RGAKRITK 103
G+ HPK+ A + F KPKGP RG KR+ +
Sbjct: 118 DGAELTAEFLYDEVHPKQHAFKQAFAKPKGPGGKRGHKRLIR 159
>ZFIN|ZDB-GENE-030131-333 [details] [associations]
symbol:wdr82 "WD repeat domain containing 82"
species:7955 "Danio rerio" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR002108 InterPro:IPR015943 Pfam:PF00241 Pfam:PF00400
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51263 SMART:SM00102
SMART:SM00320 ZFIN:ZDB-GENE-030131-333 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005622
OrthoDB:EOG4TTGJJ EMBL:AY423022 IPI:IPI00492504
ProteinModelPortal:Q6TEM7 SMR:Q6TEM7 PRIDE:Q6TEM7
HOGENOM:HOG000170291 InParanoid:Q6TEM7 ArrayExpress:Q6TEM7
Bgee:Q6TEM7 Uniprot:Q6TEM7
Length = 600
Score = 142 (55.0 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 39/102 (38%), Positives = 47/102 (46%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDXXXXXXXXXXXXXXXXXXFPYN 62
VFIYSMPGYS IKERMLYSSCK+ LL+ + +
Sbjct: 505 VFIYSMPGYSCSIKERMLYSSCKSRLLDEVER---------------DFHLEVAKKLEID 549
Query: 63 SGSXXXXXXXXXXXHPKKTAERPKFDKPKGPPN-RGAKRITK 103
SG HPK+ A + F KP+GP RG KR+ K
Sbjct: 550 SGEELTEEYLYDEVHPKQHAHKQAFAKPRGPAGKRGNKRLIK 591
>UNIPROTKB|F1NZP0 [details] [associations]
symbol:TWF2 "Twinfilin-2" species:9031 "Gallus gallus"
[GO:0003779 "actin binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR002108 Pfam:PF00241
PROSITE:PS51263 SMART:SM00102 GO:GO:0005622
GeneTree:ENSGT00530000063965 OMA:SHNAQGF EMBL:AADN02056441
EMBL:AADN02056442 EMBL:AADN02056443 EMBL:AADN02056444
EMBL:AADN02056445 EMBL:AADN02056446 EMBL:AADN02056447
IPI:IPI00822091 Ensembl:ENSGALT00000006336 ArrayExpress:F1NZP0
Uniprot:F1NZP0
Length = 341
Score = 136 (52.9 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 39/102 (38%), Positives = 48/102 (47%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDXXXXXXXXXXXXXXXXXXFPYN 62
VFIYSMPGY IKERMLYSSCK+ LL+ T++ +
Sbjct: 246 VFIYSMPGYKCSIKERMLYSSCKSRLLD-------TVEQEFCLEIAKK--------IEID 290
Query: 63 SGSXXXXXXXXXXXHPKKTAERPKFDKPKGPPN-RGAKRITK 103
G+ HPK+ A + F KPKGP RG KR+ K
Sbjct: 291 DGAELTAEFLYDEVHPKQHAFKQAFAKPKGPVGKRGQKRLIK 332
>UNIPROTKB|Q5ZM35 [details] [associations]
symbol:TWF2 "Twinfilin-2" species:9031 "Gallus gallus"
[GO:0003779 "actin binding" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] InterPro:IPR002108 Pfam:PF00241
PROSITE:PS51263 SMART:SM00102 GO:GO:0048471 GO:GO:0005856
eggNOG:COG2319 HOGENOM:HOG000168296 HOVERGEN:HBG000848 KO:K08870
EMBL:AJ719549 IPI:IPI00590073 RefSeq:NP_001025760.1
UniGene:Gga.7292 ProteinModelPortal:Q5ZM35 SMR:Q5ZM35 STRING:Q5ZM35
GeneID:415940 KEGG:gga:415940 CTD:11344 NextBio:20819466
Uniprot:Q5ZM35
Length = 349
Score = 136 (52.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 39/102 (38%), Positives = 48/102 (47%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDXXXXXXXXXXXXXXXXXXFPYN 62
VFIYSMPGY IKERMLYSSCK+ LL+ T++ +
Sbjct: 254 VFIYSMPGYKCSIKERMLYSSCKSRLLD-------TVEQEFCLEIAKK--------IEID 298
Query: 63 SGSXXXXXXXXXXXHPKKTAERPKFDKPKGPPN-RGAKRITK 103
G+ HPK+ A + F KPKGP RG KR+ K
Sbjct: 299 DGAELTAEFLYDEVHPKQHAFKQAFAKPKGPVGKRGQKRLIK 340
>UNIPROTKB|E1BRZ6 [details] [associations]
symbol:TWF2 "Twinfilin-2" species:9031 "Gallus gallus"
[GO:0003779 "actin binding" evidence=IEA] [GO:0000785 "chromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IEA] [GO:0048188 "Set1C/COMPASS complex" evidence=IEA]
[GO:0072357 "PTW/PP1 phosphatase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR002108
InterPro:IPR015943 Pfam:PF00241 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS51263 SMART:SM00102 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000785 GO:GO:0042800 GO:GO:0048188
GO:GO:0072357 GeneTree:ENSGT00530000063965 EMBL:AADN02056441
EMBL:AADN02056442 EMBL:AADN02056443 EMBL:AADN02056444
EMBL:AADN02056445 EMBL:AADN02056446 EMBL:AADN02056447
IPI:IPI00577651 ProteinModelPortal:E1BRZ6
Ensembl:ENSGALT00000006337 ArrayExpress:E1BRZ6 Uniprot:E1BRZ6
Length = 601
Score = 136 (52.9 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 39/102 (38%), Positives = 48/102 (47%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDXXXXXXXXXXXXXXXXXXFPYN 62
VFIYSMPGY IKERMLYSSCK+ LL+ T++ +
Sbjct: 506 VFIYSMPGYKCSIKERMLYSSCKSRLLD-------TVEQEFCLEIAKK--------IEID 550
Query: 63 SGSXXXXXXXXXXXHPKKTAERPKFDKPKGPPN-RGAKRITK 103
G+ HPK+ A + F KPKGP RG KR+ K
Sbjct: 551 DGAELTAEFLYDEVHPKQHAFKQAFAKPKGPVGKRGQKRLIK 592
>UNIPROTKB|E2RGD3 [details] [associations]
symbol:TWF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] InterPro:IPR002108
Pfam:PF00241 PROSITE:PS51263 SMART:SM00102 GO:GO:0005622
GeneTree:ENSGT00530000063868 KO:K08870 CTD:11344 OMA:SHNAQGF
EMBL:AAEX03012198 RefSeq:XP_003432860.1 Ensembl:ENSCAFT00000015648
GeneID:100684904 KEGG:cfa:100684904 Uniprot:E2RGD3
Length = 349
Score = 132 (51.5 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 37/102 (36%), Positives = 46/102 (45%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDXXXXXXXXXXXXXXXXXXFPYN 62
VFIYSMPGY IKERMLYSSCK+ LL+++
Sbjct: 254 VFIYSMPGYKCSIKERMLYSSCKSRLLDSVEQ---------------DFQLEISKKIEIG 298
Query: 63 SGSXXXXXXXXXXXHPKKTAERPKFDKPKGPPN-RGAKRITK 103
G+ HPK+ A + F KPKGP RG KR+ +
Sbjct: 299 DGAELTAEFLYDEVHPKQHAFKQAFAKPKGPGGKRGHKRLIR 340
>UNIPROTKB|Q6IBS0 [details] [associations]
symbol:TWF2 "Twinfilin-2" species:9606 "Homo sapiens"
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=ISS] [GO:0003785 "actin monomer binding" evidence=ISS]
[GO:0005546 "phosphatidylinositol-4,5-bisphosphate binding"
evidence=ISS] [GO:0030027 "lamellipodium" evidence=ISS] [GO:0030175
"filopodium" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0071300 "cellular response to retinoic acid"
evidence=IMP] [GO:0010976 "positive regulation of neuron projection
development" evidence=IMP] [GO:0032956 "regulation of actin
cytoskeleton organization" evidence=IMP] [GO:0071363 "cellular
response to growth factor stimulus" evidence=IMP] [GO:0045773
"positive regulation of axon extension" evidence=IMP] [GO:0010592
"positive regulation of lamellipodium assembly" evidence=IMP]
[GO:0030426 "growth cone" evidence=IDA] [GO:0042989 "sequestering
of actin monomers" evidence=ISS] [GO:0051016 "barbed-end actin
filament capping" evidence=ISS] [GO:0030016 "myofibril"
evidence=ISS] [GO:0032420 "stereocilium" evidence=ISS] [GO:0032532
"regulation of microvillus length" evidence=IC] InterPro:IPR002108
Pfam:PF00241 PROSITE:PS51263 SMART:SM00102 EMBL:Y17169
GO:GO:0005524 GO:GO:0048471 GO:GO:0071363 GO:GO:0010976
GO:GO:0005856 GO:GO:0071300 GO:GO:0030027 GO:GO:0030175
GO:GO:0030426 GO:GO:0003785 GO:GO:0030016 GO:GO:0005546
GO:GO:0051016 GO:GO:0045773 GO:GO:0030030 GO:GO:0010592
GO:GO:0032420 GO:GO:0042989 GermOnline:ENSG00000173366
eggNOG:NOG263290 HOGENOM:HOG000168296 HOVERGEN:HBG000848 KO:K08870
CTD:11344 OMA:SHNAQGF EMBL:AL136773 EMBL:AF109365 EMBL:CR456732
EMBL:CR533520 EMBL:BC000327 EMBL:BC003161 EMBL:BC016452
IPI:IPI00550917 PIR:T46362 RefSeq:NP_009215.1 UniGene:Hs.436439
PDB:2VAC PDB:2W0I PDBsum:2VAC PDBsum:2W0I ProteinModelPortal:Q6IBS0
SMR:Q6IBS0 IntAct:Q6IBS0 MINT:MINT-1414584 STRING:Q6IBS0
PhosphoSite:Q6IBS0 DMDM:94730596 OGP:Q9Y3F5 PaxDb:Q6IBS0
PeptideAtlas:Q6IBS0 PRIDE:Q6IBS0 DNASU:11344
Ensembl:ENST00000305533 GeneID:11344 KEGG:hsa:11344 UCSC:uc003ddd.3
GeneCards:GC03M052262 HGNC:HGNC:9621 MIM:607433 neXtProt:NX_Q6IBS0
PharmGKB:PA162407429 InParanoid:Q6IBS0 EvolutionaryTrace:Q6IBS0
GenomeRNAi:11344 NextBio:43112 ArrayExpress:Q6IBS0 Bgee:Q6IBS0
CleanEx:HS_TWF2 Genevestigator:Q6IBS0 GO:GO:0032532 Uniprot:Q6IBS0
Length = 349
Score = 132 (51.5 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 37/102 (36%), Positives = 46/102 (45%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDXXXXXXXXXXXXXXXXXXFPYN 62
VFIYSMPGY IKERMLYSSCK+ LL+++
Sbjct: 254 VFIYSMPGYKCSIKERMLYSSCKSRLLDSVEQ---------------DFHLEIAKKIEIG 298
Query: 63 SGSXXXXXXXXXXXHPKKTAERPKFDKPKGPPN-RGAKRITK 103
G+ HPK+ A + F KPKGP RG KR+ +
Sbjct: 299 DGAELTAEFLYDEVHPKQHAFKQAFAKPKGPGGKRGHKRLIR 340
>UNIPROTKB|F1SIX7 [details] [associations]
symbol:TWF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] InterPro:IPR002108 Pfam:PF00241
PROSITE:PS51263 SMART:SM00102 GO:GO:0005622
GeneTree:ENSGT00530000063868 KO:K08870 CTD:11344 OMA:SHNAQGF
EMBL:CU915558 RefSeq:XP_003358510.1 Ensembl:ENSSSCT00000012515
GeneID:100621688 KEGG:ssc:100621688 Uniprot:F1SIX7
Length = 349
Score = 132 (51.5 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 37/102 (36%), Positives = 46/102 (45%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDXXXXXXXXXXXXXXXXXXFPYN 62
VFIYSMPGY IKERMLYSSCK+ LL+++
Sbjct: 254 VFIYSMPGYKCSIKERMLYSSCKSRLLDSVEQ---------------DFQLEIAKKIEIG 298
Query: 63 SGSXXXXXXXXXXXHPKKTAERPKFDKPKGPPN-RGAKRITK 103
G+ HPK+ A + F KPKGP RG KR+ +
Sbjct: 299 DGAELTAEFLYDEVHPKQHAFKQAFAKPKGPGGKRGHKRLIR 340
>MGI|MGI:1346078 [details] [associations]
symbol:Twf2 "twinfilin, actin-binding protein, homolog 2
(Drosophila)" species:10090 "Mus musculus" [GO:0003779 "actin
binding" evidence=IEA] [GO:0003785 "actin monomer binding"
evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=ISO;ISA] [GO:0005524 "ATP binding" evidence=ISO;ISA]
[GO:0005546 "phosphatidylinositol-4,5-bisphosphate binding"
evidence=IDA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0010592 "positive regulation of lamellipodium assembly"
evidence=ISO] [GO:0010976 "positive regulation of neuron projection
development" evidence=ISO] [GO:0030016 "myofibril" evidence=IDA]
[GO:0030027 "lamellipodium" evidence=IDA] [GO:0030030 "cell
projection organization" evidence=IEA] [GO:0030175 "filopodium"
evidence=IDA] [GO:0030426 "growth cone" evidence=ISO] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IDA] [GO:0032420 "stereocilium" evidence=IDA] [GO:0032532
"regulation of microvillus length" evidence=IC] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=ISO]
[GO:0035556 "intracellular signal transduction" evidence=ISA]
[GO:0042989 "sequestering of actin monomers" evidence=IDA]
[GO:0042995 "cell projection" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] [GO:0051016
"barbed-end actin filament capping" evidence=IDA] [GO:0071300
"cellular response to retinoic acid" evidence=ISO] [GO:0071363
"cellular response to growth factor stimulus" evidence=ISO]
InterPro:IPR002108 Pfam:PF00241 PROSITE:PS51263 SMART:SM00102
MGI:MGI:1346078 GO:GO:0005524 GO:GO:0048471 GO:GO:0005080
GO:GO:0071363 GO:GO:0010976 GO:GO:0005856 GO:GO:0035556
GO:GO:0071300 GO:GO:0030027 GO:GO:0030175 GO:GO:0030426
GO:GO:0003785 GO:GO:0030016 GO:GO:0005546 GO:GO:0051016
GO:GO:0030837 GO:GO:0045773 GO:GO:0030030 GO:GO:0010592
GO:GO:0032420 GO:GO:0042989 eggNOG:NOG263290
GeneTree:ENSGT00530000063868 HOGENOM:HOG000168296
HOVERGEN:HBG000848 KO:K08870 OrthoDB:EOG4TTGJJ CTD:11344
OMA:SHNAQGF GO:GO:0032532 EMBL:Y17808 EMBL:AY267189 EMBL:AK002699
EMBL:AK084026 EMBL:AK087422 EMBL:AK155204 EMBL:AK157886
EMBL:AK166900 EMBL:AK170441 EMBL:BC003338 IPI:IPI00129299
IPI:IPI00751146 RefSeq:NP_036006.1 UniGene:Mm.274346
ProteinModelPortal:Q9Z0P5 SMR:Q9Z0P5 STRING:Q9Z0P5
PhosphoSite:Q9Z0P5 PaxDb:Q9Z0P5 PRIDE:Q9Z0P5
Ensembl:ENSMUST00000024047 GeneID:23999 KEGG:mmu:23999
UCSC:uc009rjf.1 UCSC:uc009rjg.1 InParanoid:Q9Z0P5 NextBio:303917
Bgee:Q9Z0P5 Genevestigator:Q9Z0P5 GermOnline:ENSMUSG00000023277
Uniprot:Q9Z0P5
Length = 349
Score = 132 (51.5 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 37/102 (36%), Positives = 46/102 (45%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDXXXXXXXXXXXXXXXXXXFPYN 62
VFIYSMPGY IKERMLYSSCK+ LL+++
Sbjct: 254 VFIYSMPGYKCSIKERMLYSSCKSRLLDSVEQ---------------DFQLEIAKKIEIG 298
Query: 63 SGSXXXXXXXXXXXHPKKTAERPKFDKPKGPPN-RGAKRITK 103
G+ HPK+ A + F KPKGP RG KR+ +
Sbjct: 299 DGAELTAEFLYDEVHPKQHAFKQAFAKPKGPGGKRGHKRLIR 340
>ZFIN|ZDB-GENE-050522-238 [details] [associations]
symbol:twf2b "twinfilin, actin-binding protein,
homolog 2b (Drosophila)" species:7955 "Danio rerio" [GO:0003779
"actin binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002108 Pfam:PF00241 PROSITE:PS51263 SMART:SM00102
ZFIN:ZDB-GENE-050522-238 GO:GO:0005622 GeneTree:ENSGT00530000063868
EMBL:CR589944 IPI:IPI00859496 Ensembl:ENSDART00000104046
Uniprot:E7F2D6
Length = 369
Score = 132 (51.5 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 40/102 (39%), Positives = 46/102 (45%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDXXXXXXXXXXXXXXXXXXFPYN 62
VFIYSMPGYS IKERMLYSSCK LL+ + I+
Sbjct: 274 VFIYSMPGYSCSIKERMLYSSCKNRLLDEVER-DYHIEIAKK--------------MEIE 318
Query: 63 SGSXXXXXXXXXXXHPKKTAERPKFDKPKGPPN-RGAKRITK 103
SG +PK A R F KPKGP RG KR+ +
Sbjct: 319 SGDGLTEDFLYEEVYPKHHALRQAFSKPKGPTGKRGNKRLIR 360
>WB|WBGene00018187 [details] [associations]
symbol:F38E9.5 species:6239 "Caenorhabditis elegans"
[GO:0003779 "actin binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR002108 Pfam:PF00241
PROSITE:PS51263 SMART:SM00102 GO:GO:0005622 EMBL:FO081327
eggNOG:NOG263290 GeneTree:ENSGT00530000063868 HOGENOM:HOG000168296
KO:K08870 OMA:VIRKIEI HSSP:Q91YR1 PIR:T30015 RefSeq:NP_510669.1
ProteinModelPortal:Q20173 SMR:Q20173 DIP:DIP-25889N
MINT:MINT-1077633 STRING:Q20173 PaxDb:Q20173
EnsemblMetazoa:F38E9.5.1 EnsemblMetazoa:F38E9.5.2 GeneID:181711
KEGG:cel:CELE_F38E9.5 UCSC:F38E9.5.1 CTD:181711 WormBase:F38E9.5
InParanoid:Q20173 NextBio:915042 Uniprot:Q20173
Length = 333
Score = 94 (38.1 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 18/27 (66%), Positives = 20/27 (74%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLL 29
+FIYS+P IKERMLYSSCK P L
Sbjct: 248 LFIYSLPSSGSSIKERMLYSSCKGPFL 274
Score = 55 (24.4 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 77 HPKKTAERPK-FDKPKGPPNRGAKRITK 103
HP E PK F +P PP G +RITK
Sbjct: 307 HPLPV-EAPKQFSRP-APPRAGPRRITK 332
>UNIPROTKB|A2VDX0 [details] [associations]
symbol:TWF2 "TWF2 protein" species:9913 "Bos taurus"
[GO:0005622 "intracellular" evidence=IEA] [GO:0003779 "actin
binding" evidence=IEA] InterPro:IPR002108 Pfam:PF00241
PROSITE:PS51263 SMART:SM00102 eggNOG:COG2319 GO:GO:0005622
GeneTree:ENSGT00530000063965 HOGENOM:HOG000168296
HOVERGEN:HBG000848 KO:K08870 CTD:11344 OMA:SHNAQGF
EMBL:DAAA02054383 EMBL:DAAA02054384 EMBL:BC133441 IPI:IPI00840017
RefSeq:NP_001098794.1 UniGene:Bt.76198 SMR:A2VDX0 STRING:A2VDX0
Ensembl:ENSBTAT00000024225 GeneID:282024 KEGG:bta:282024
NextBio:20805888 Uniprot:A2VDX0
Length = 349
Score = 126 (49.4 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 35/102 (34%), Positives = 45/102 (44%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDXXXXXXXXXXXXXXXXXXFPYN 62
VFIYSMPGY IKERMLYSSCK+ LL+++
Sbjct: 254 VFIYSMPGYKCSIKERMLYSSCKSRLLDSVEQ---------------DFQLEIAKKIEIG 298
Query: 63 SGSXXXXXXXXXXXHPKKTAERPKFDKPKGPPN-RGAKRITK 103
G+ HPK+ + F KP+GP RG KR+ +
Sbjct: 299 DGAELTADFLYDEVHPKQHLAKRAFAKPRGPEGKRGHKRLIR 340
>UNIPROTKB|F1MG94 [details] [associations]
symbol:WDR82 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072357 "PTW/PP1 phosphatase complex" evidence=IEA]
[GO:0048188 "Set1C/COMPASS complex" evidence=IEA] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR002108
InterPro:IPR015943 Pfam:PF00241 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS51263 SMART:SM00102 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000785 GO:GO:0042800 GO:GO:0048188
GO:GO:0072357 GeneTree:ENSGT00530000063965 EMBL:DAAA02054383
EMBL:DAAA02054384 IPI:IPI00688764 ProteinModelPortal:F1MG94
Ensembl:ENSBTAT00000045850 ArrayExpress:F1MG94 Uniprot:F1MG94
Length = 602
Score = 126 (49.4 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 35/102 (34%), Positives = 45/102 (44%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDXXXXXXXXXXXXXXXXXXFPYN 62
VFIYSMPGY IKERMLYSSCK+ LL+++
Sbjct: 507 VFIYSMPGYKCSIKERMLYSSCKSRLLDSVEQ---------------DFQLEIAKKIEIG 551
Query: 63 SGSXXXXXXXXXXXHPKKTAERPKFDKPKGPPN-RGAKRITK 103
G+ HPK+ + F KP+GP RG KR+ +
Sbjct: 552 DGAELTADFLYDEVHPKQHLAKRAFAKPRGPEGKRGHKRLIR 593
>UNIPROTKB|H0Y858 [details] [associations]
symbol:H0Y858 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0002237 "response to molecule of bacterial origin"
evidence=IEA] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0034162
"toll-like receptor 9 signaling pathway" evidence=IEA] [GO:0045087
"innate immune response" evidence=IEA] [GO:0050707 "regulation of
cytokine secretion" evidence=IEA] [GO:0050729 "positive regulation
of inflammatory response" evidence=IEA] Pfam:PF00560
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR002108
InterPro:IPR027181 Pfam:PF00241 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51263 PROSITE:PS51450 SMART:SM00102 GO:GO:0007165
InterPro:IPR003591 SMART:SM00369 GO:GO:0005622 SUPFAM:SSF52200
PANTHER:PTHR24373:SF37 OMA:VGGNCRR EMBL:AC097637
ProteinModelPortal:H0Y858 Ensembl:ENST00000494383 Uniprot:H0Y858
Length = 1186
Score = 116 (45.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 22/30 (73%), Positives = 26/30 (86%)
Query: 3 VFIYSMPGYSLPIKERMLYSSCKAPLLENL 32
VFIYSMPGY IKERMLYSSCK+ LL+++
Sbjct: 115 VFIYSMPGYKCSIKERMLYSSCKSRLLDSV 144
>CGD|CAL0006222 [details] [associations]
symbol:orf19.2228 species:5476 "Candida albicans" [GO:0043332
"mating projection tip" evidence=IEA] [GO:0003785 "actin monomer
binding" evidence=IEA] [GO:0042989 "sequestering of actin monomers"
evidence=IEA] InterPro:IPR002108 Pfam:PF00241 PROSITE:PS51263
SMART:SM00102 CGD:CAL0006222 EMBL:AACQ01000095 EMBL:AACQ01000096
GO:GO:0005622 eggNOG:NOG263290 RefSeq:XP_714759.1
RefSeq:XP_714819.1 ProteinModelPortal:Q59Z70 GeneID:3643515
GeneID:3643537 KEGG:cal:CaO19.2228 KEGG:cal:CaO19.9770
Uniprot:Q59Z70
Length = 407
Score = 68 (29.0 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 4 FIYSMPGYSLPIKERMLYSSCKAPLLENLHHL 35
FIYS P S +K+RM+Y+S K L+ +L+ L
Sbjct: 301 FIYSCPSGS-SVKDRMIYASFKNSLINHLNQL 331
Score = 45 (20.9 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 86 KFDKPKGPPNR 96
KF+KPKGP R
Sbjct: 397 KFNKPKGPRRR 407
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.138 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 116 87 0.00091 102 3 11 22 0.48 29
29 0.48 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 500 (53 KB)
Total size of DFA: 97 KB (2070 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 9.51u 0.09s 9.60t Elapsed: 00:00:03
Total cpu time: 9.52u 0.09s 9.61t Elapsed: 00:00:04
Start: Thu Aug 15 12:56:09 2013 End: Thu Aug 15 12:56:13 2013