BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1580
(267 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9R226|KHDR3_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Mus musculus GN=Khdrbs3 PE=1 SV=1
Length = 346
Score = 177 bits (448), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 146/231 (63%), Gaps = 29/231 (12%)
Query: 2 KHQEPHGR---KMVDITRDKPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTM 58
K Q+ G+ K +D+ +K +K+ +V++PV+ PKFNFVGKLLGP+GNSLKRLQE+T+
Sbjct: 33 KFQKGEGKEEEKYIDVVINKNMKLGQKVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETL 92
Query: 59 TRMAILGRGSIRDRHKEEELRISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVR 118
T+M+ILG+GS+RD+ KEEELR SG+ K+ HL ++LHV I FAPPAEA+AR+ +AL E++
Sbjct: 93 TKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIK 152
Query: 119 RFLVPFTRSLFQDYNDEIRQEQMWEMQILKEDGGAASCSESSESSVNNPLLYAENTSPVE 178
+FL+P DYNDEIRQ Q+ E+ L +GG+ + + P++ ++T
Sbjct: 153 KFLIP-------DYNDEIRQAQLQELTYL--NGGSENA--------DVPVVRGKSTLRTR 195
Query: 179 NLTPPEYTLVDPAFNRIQPATEAINIPTKT------MTTAALVNRKRPLLT 223
+T P T + A+ +P T ++T V+R R LLT
Sbjct: 196 GVTTPAITR---GRGGVTARPVAVGVPRGTPTPRGVLSTRGPVSRGRGLLT 243
>sp|Q920F3|KHDR2_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Rattus norvegicus GN=Khdrbs2 PE=1 SV=1
Length = 349
Score = 176 bits (447), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/144 (56%), Positives = 113/144 (78%), Gaps = 7/144 (4%)
Query: 4 QEPHGRKMVDITRDKPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAI 63
+E +K +D+ +K IK++ RV++PV+ +PKFNFVGKLLGP+GNSLKRLQE+T +M+I
Sbjct: 42 KEDEEKKYLDVISNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSI 101
Query: 64 LGRGSIRDRHKEEELRISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVP 123
LG+GS+RD+ KEEELR SG+ K+ HL +ELHV I FAPP EA++R+++AL E+++FLVP
Sbjct: 102 LGKGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP 161
Query: 124 FTRSLFQDYNDEIRQEQMWEMQIL 147
DYNDEIRQEQ+ E+ L
Sbjct: 162 -------DYNDEIRQEQLRELSYL 178
>sp|Q5VWX1|KHDR2_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Homo sapiens GN=KHDRBS2 PE=1 SV=1
Length = 349
Score = 176 bits (446), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/144 (56%), Positives = 113/144 (78%), Gaps = 7/144 (4%)
Query: 4 QEPHGRKMVDITRDKPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAI 63
+E +K +D+ +K IK++ RV++PV+ +PKFNFVGKLLGP+GNSLKRLQE+T +M+I
Sbjct: 42 KEDEEKKYLDVISNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSI 101
Query: 64 LGRGSIRDRHKEEELRISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVP 123
LG+GS+RD+ KEEELR SG+ K+ HL +ELHV I FAPP EA++R+++AL E+++FLVP
Sbjct: 102 LGKGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP 161
Query: 124 FTRSLFQDYNDEIRQEQMWEMQIL 147
DYNDEIRQEQ+ E+ L
Sbjct: 162 -------DYNDEIRQEQLRELSYL 178
>sp|Q9WU01|KHDR2_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Mus musculus GN=Khdrbs2 PE=1 SV=1
Length = 349
Score = 176 bits (445), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/144 (56%), Positives = 113/144 (78%), Gaps = 7/144 (4%)
Query: 4 QEPHGRKMVDITRDKPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAI 63
+E +K +D+ +K IK++ RV++PV+ +PKFNFVGKLLGP+GNSLKRLQE+T +M+I
Sbjct: 42 KEDEEKKYLDVISNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSI 101
Query: 64 LGRGSIRDRHKEEELRISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVP 123
LG+GS+RD+ KEEELR SG+ K+ HL +ELHV I FAPP EA++R+++AL E+++FLVP
Sbjct: 102 LGKGSMRDKTKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP 161
Query: 124 FTRSLFQDYNDEIRQEQMWEMQIL 147
DYNDEIRQEQ+ E+ L
Sbjct: 162 -------DYNDEIRQEQLRELSYL 178
>sp|Q9JLP1|KHDR3_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Rattus norvegicus GN=Khdrbs3 PE=1 SV=1
Length = 346
Score = 175 bits (443), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 141/220 (64%), Gaps = 26/220 (11%)
Query: 10 KMVDITRDKPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSI 69
K +D+ +K +K+ +V++PV+ PKFNFVGKLLGP+GNSLKRLQE+T+T+M+ILG+GS+
Sbjct: 44 KYIDVVINKNMKLGQKVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSM 103
Query: 70 RDRHKEEELRISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLF 129
RD+ KEEELR SG+ K+ HL ++LHV I FAPPAEA+AR+ +AL ++++FL+P
Sbjct: 104 RDKAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAEAYARMGHALEDIKKFLIP------ 157
Query: 130 QDYNDEIRQEQMWEMQILKEDGGAASCSESSESSVNNPLLYAENTSPVENLTPPEYTLVD 189
DYNDEIRQ Q+ E+ L +GG+ + + P++ ++T +T P T
Sbjct: 158 -DYNDEIRQAQLQELTYL--NGGSENA--------DVPVVRGKSTLRTRGVTTPAITR-- 204
Query: 190 PAFNRIQPATEAINIPTKT------MTTAALVNRKRPLLT 223
+ A+ +P T ++T V+R R LLT
Sbjct: 205 -GRGGVTARPVAVGVPRGTPTPRGVLSTRGPVSRGRGLLT 243
>sp|O75525|KHDR3_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Homo sapiens GN=KHDRBS3 PE=1 SV=1
Length = 346
Score = 174 bits (442), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 119/159 (74%), Gaps = 12/159 (7%)
Query: 2 KHQEPHGR---KMVDITRDKPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTM 58
K Q+ G+ K +D+ +K +K+ +V++PV+ PKFNFVGKLLGP+GNSLKRLQE+T+
Sbjct: 33 KFQKGEGKDEEKYIDVVINKNMKLGQKVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETL 92
Query: 59 TRMAILGRGSIRDRHKEEELRISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVR 118
T+M+ILG+GS+RD+ KEEELR SG+ K+ HL ++LHV I FAPPAEA+AR+ +AL E++
Sbjct: 93 TKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIK 152
Query: 119 RFLVPFTRSLFQDYNDEIRQEQMWEMQILKEDGGAASCS 157
+FL+P DYNDEIRQ Q+ E+ L +GG+ +
Sbjct: 153 KFLIP-------DYNDEIRQAQLQELTYL--NGGSENAD 182
>sp|Q08BJ2|KHDR2_DANRE KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Danio rerio GN=khdrbs2 PE=2 SV=1
Length = 346
Score = 174 bits (442), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 110/139 (79%), Gaps = 7/139 (5%)
Query: 9 RKMVDITRDKPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGS 68
+K +DI +K IK++ RV++PV+ +PKFNFVGKLLGP+GNS+KRLQE+T +M+ILG+GS
Sbjct: 47 KKYLDIISNKNIKLSERVLIPVQQYPKFNFVGKLLGPRGNSMKRLQEETGAKMSILGKGS 106
Query: 69 IRDRHKEEELRISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSL 128
+RD+ KEEELR SG+ K+ HL +LHV I FAPP EA++R+++AL E+++FLVP
Sbjct: 107 MRDKGKEEELRKSGEAKYAHLSNDLHVLIEVFAPPGEAYSRMSHALEEIKKFLVP----- 161
Query: 129 FQDYNDEIRQEQMWEMQIL 147
DYNDEIRQEQ+ E+ L
Sbjct: 162 --DYNDEIRQEQLRELSYL 178
>sp|Q0VFL3|KHDR2_XENTR KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Xenopus tropicalis GN=khdrbs2 PE=2 SV=1
Length = 345
Score = 169 bits (429), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/145 (55%), Positives = 112/145 (77%), Gaps = 7/145 (4%)
Query: 3 HQEPHGRKMVDITRDKPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMA 62
++E +K +DI +K IK++ RV++PV+ +PKFNFVGKLLGP+GNSLKRLQE+T +M+
Sbjct: 41 NKEDGEKKYLDIISNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMS 100
Query: 63 ILGRGSIRDRHKEEELRISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLV 122
ILG+GS+RD+ KEEELR S + K HL +ELHV + FAPP EA++R+++AL E+++FLV
Sbjct: 101 ILGKGSMRDKIKEEELRKSDEAKHAHLSDELHVLLEVFAPPGEAYSRMSHALEEIKKFLV 160
Query: 123 PFTRSLFQDYNDEIRQEQMWEMQIL 147
P DYNDEIRQEQ+ E+ L
Sbjct: 161 P-------DYNDEIRQEQLRELSYL 178
>sp|Q91V33|KHDR1_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Rattus norvegicus GN=Khdrbs1 PE=1 SV=1
Length = 443
Score = 150 bits (380), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 100/136 (73%), Gaps = 7/136 (5%)
Query: 12 VDITRDKPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRD 71
+D+ K +K+ RV++PV+ +PKFNFVGK+LGP+GN++KRLQE+T ++++LG+GS+RD
Sbjct: 146 LDLFSHKNMKLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRD 205
Query: 72 RHKEEELRISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQD 131
+ KEEELR GDPK+ HL +LHV I F PP EA+A +A+A+ EV++FLVP D
Sbjct: 206 KAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP-------D 258
Query: 132 YNDEIRQEQMWEMQIL 147
D+I QEQ E+ L
Sbjct: 259 MMDDICQEQFLELSYL 274
>sp|Q60749|KHDR1_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Mus musculus GN=Khdrbs1 PE=1 SV=2
Length = 443
Score = 150 bits (380), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 100/136 (73%), Gaps = 7/136 (5%)
Query: 12 VDITRDKPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRD 71
+D+ K +K+ RV++PV+ +PKFNFVGK+LGP+GN++KRLQE+T ++++LG+GS+RD
Sbjct: 146 LDLFSHKNMKLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRD 205
Query: 72 RHKEEELRISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQD 131
+ KEEELR GDPK+ HL +LHV I F PP EA+A +A+A+ EV++FLVP D
Sbjct: 206 KAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP-------D 258
Query: 132 YNDEIRQEQMWEMQIL 147
D+I QEQ E+ L
Sbjct: 259 MMDDICQEQFLELSYL 274
>sp|Q8UUW7|KHDR1_CHICK KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Gallus gallus GN=KHDRBS1 PE=2 SV=1
Length = 433
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 100/136 (73%), Gaps = 7/136 (5%)
Query: 12 VDITRDKPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRD 71
+D+ K +K+ RV++PV+ +PKFNFVGK+LGP+GN++KRLQE+T ++++LG+GS+RD
Sbjct: 129 LDLFSHKNMKLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRD 188
Query: 72 RHKEEELRISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQD 131
+ KEEELR GDPK+ HL +LHV I F PP EA+A +A+A+ EV++FLVP D
Sbjct: 189 KAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP-------D 241
Query: 132 YNDEIRQEQMWEMQIL 147
D+I QEQ E+ L
Sbjct: 242 MMDDICQEQFLELSYL 257
>sp|Q07666|KHDR1_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Homo sapiens GN=KHDRBS1 PE=1 SV=1
Length = 443
Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 100/136 (73%), Gaps = 7/136 (5%)
Query: 12 VDITRDKPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRD 71
+D+ K +K+ RV++PV+ +PKFNFVGK+LGP+GN++KRLQE+T ++++LG+GS+RD
Sbjct: 146 LDLFSHKNMKLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRD 205
Query: 72 RHKEEELRISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQD 131
+ KEEELR GDPK+ HL +LHV I F PP EA+A +A+A+ EV++FLVP D
Sbjct: 206 KAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP-------D 258
Query: 132 YNDEIRQEQMWEMQIL 147
D+I QEQ E+ L
Sbjct: 259 MMDDICQEQFLELSYL 274
>sp|P13230|GRP33_ARTSA Glycine-rich protein GRP33 OS=Artemia salina PE=2 SV=1
Length = 308
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 92/116 (79%)
Query: 8 GRKMVDITRDKPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRG 67
G +D+ D +K+ R +PV PK+NF+GKLLGP G+++K+LQ++TMT+++ILGRG
Sbjct: 60 GSGFMDLYNDTKVKLVSRCCLPVDQFPKYNFLGKLLGPGGSTMKQLQDETMTKISILGRG 119
Query: 68 SIRDRHKEEELRISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVP 123
S+RDR+KEEELR SGD K+ HL E+LH+EI + A PAEAHAR+AYAL E+++++ P
Sbjct: 120 SMRDRNKEEELRNSGDVKYAHLNEQLHIEIISIASPAEAHARMAYALTEIKKYITP 175
>sp|O01367|HOW_DROME Protein held out wings OS=Drosophila melanogaster GN=how PE=1 SV=1
Length = 405
Score = 101 bits (251), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 81/123 (65%), Gaps = 7/123 (5%)
Query: 25 RVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEELRISGDP 84
+V VPVR+HP FNFVG++LGP+G + K+L+++T ++ + G+GS+RD+ KE+ R G P
Sbjct: 140 KVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANR--GKP 197
Query: 85 KFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIRQEQMWEM 144
+ HL ++LHV IT A ++A A+AEV++ LVP DE+++ Q+ E+
Sbjct: 198 NWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLLVPQAEG-----EDELKKRQLMEL 252
Query: 145 QIL 147
I+
Sbjct: 253 AII 255
>sp|Q9FKT4|QKIL2_ARATH KH domain-containing protein At5g56140 OS=Arabidopsis thaliana
GN=At5g56140 PE=2 SV=1
Length = 315
Score = 97.8 bits (242), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 88/149 (59%), Gaps = 11/149 (7%)
Query: 21 KVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEELRI 80
K TIRV +PV ++P FNFVG+LLGP+GNSLKR++ T R+ I GRGSI+D KEE +R
Sbjct: 165 KRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMR- 223
Query: 81 SGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIRQEQ 140
G P + HL E LH+ + A P AR+ A + L P ++ +D +++Q
Sbjct: 224 -GKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTP-----MEETHDMYKKQQ 277
Query: 141 MWEMQI----LKEDGGAASCSESSESSVN 165
+ E+ + L+E+G S S S +S+
Sbjct: 278 LRELALLNGTLREEGSPMSGSVSPYNSLG 306
>sp|Q9ZVI3|QKIL3_ARATH KH domain-containing protein At2g38610 OS=Arabidopsis thaliana
GN=At2g38610 PE=1 SV=1
Length = 286
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 82/131 (62%), Gaps = 7/131 (5%)
Query: 20 IKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEELR 79
+K +R+ +PV ++P FNFVG+LLGP+GNSLKR++ T R+ I G+GSI+D KE++LR
Sbjct: 134 VKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPEKEDKLR 193
Query: 80 ISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIRQE 139
G P + HL E+LH+ I A P + R+ A + L P S QD+ I+++
Sbjct: 194 --GRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDES--QDF---IKRQ 246
Query: 140 QMWEMQILKED 150
Q+ E+ +L +
Sbjct: 247 QLRELALLNSN 257
>sp|Q8GYR4|QKIL4_ARATH KH domain-containing protein At3g08620 OS=Arabidopsis thaliana
GN=At3g08620 PE=2 SV=1
Length = 283
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 81/132 (61%), Gaps = 7/132 (5%)
Query: 19 PIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEEL 78
P+K +R+ +PV +P FNFVG+LLGP+GNSLKR++ T R+ I G+GSI+D KEE+L
Sbjct: 132 PVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEEKL 191
Query: 79 RISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIRQ 138
+ G P + HL E+LH+ I A P ++ A + + P S QDY I++
Sbjct: 192 K--GKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDES--QDY---IKR 244
Query: 139 EQMWEMQILKED 150
+Q+ E+ +L +
Sbjct: 245 QQLRELALLNSN 256
>sp|Q8GWR3|QKIL5_ARATH KH domain-containing protein At1g09660 OS=Arabidopsis thaliana
GN=At1g09660 PE=2 SV=1
Length = 298
Score = 94.7 bits (234), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 79/128 (61%), Gaps = 7/128 (5%)
Query: 20 IKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEELR 79
+K IR+ VPV +P +NFVG++LGP+GNSLKR++ T R+ I GRGS++D KEE+L+
Sbjct: 145 VKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCRVFIRGRGSVKDTVKEEKLK 204
Query: 80 ISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIRQE 139
G P + HL E LHV I A P ++R+ +A+ + L P S+ D ++E
Sbjct: 205 --GKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKPMDESM-----DHYKRE 257
Query: 140 QMWEMQIL 147
Q+ E+ L
Sbjct: 258 QLKELAAL 265
>sp|Q0WLR1|QKIL1_ARATH KH domain-containing protein At4g26480 OS=Arabidopsis thaliana
GN=At4g26480 PE=2 SV=1
Length = 308
Score = 94.7 bits (234), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 88/150 (58%), Gaps = 11/150 (7%)
Query: 20 IKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEELR 79
+K TIRV +PV +P +NFVG+LLGP+GNSLKR++ T R+ I GRGSI+D KE+ +R
Sbjct: 158 VKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEDMMR 217
Query: 80 ISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIRQE 139
G P + HL E LH+ + A P AR+ A + L P ++ +D +++
Sbjct: 218 --GKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTP-----VEETHDFYKKQ 270
Query: 140 QMWEMQI----LKEDGGAASCSESSESSVN 165
Q+ E+ + L+E+G S S S +S+
Sbjct: 271 QLRELALLNGSLREEGSPMSGSISPYNSLG 300
>sp|Q6IRN2|QKIB_XENLA Protein quaking-B OS=Xenopus laevis GN=qki-b PE=1 SV=1
Length = 342
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 81/128 (63%), Gaps = 7/128 (5%)
Query: 20 IKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEELR 79
+++ ++ VPV+++P FNFVG++LGP+G + K+L+ +T ++ + G+GS+RD+ KEE+ R
Sbjct: 81 VQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 140
Query: 80 ISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIRQE 139
G P + HL E+LHV IT A ++ A+ EV++ LVP D +++
Sbjct: 141 --GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEG-----EDSLKKM 193
Query: 140 QMWEMQIL 147
Q+ E+ IL
Sbjct: 194 QLMELAIL 201
>sp|Q32NN2|QKIA_XENLA Protein quaking-A OS=Xenopus laevis GN=qki-a PE=1 SV=2
Length = 341
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 81/128 (63%), Gaps = 7/128 (5%)
Query: 20 IKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEELR 79
+++ ++ VPV+++P FNFVG++LGP+G + K+L+ +T ++ + G+GS+RD+ KEE+ R
Sbjct: 81 VQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 140
Query: 80 ISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIRQE 139
G P + HL E+LHV IT A ++ A+ EV++ LVP D +++
Sbjct: 141 --GKPNWEHLNEDLHVLITVEDAQNRAELKLKRAVEEVKKLLVPAAEG-----EDSLKKM 193
Query: 140 QMWEMQIL 147
Q+ E+ IL
Sbjct: 194 QLMELAIL 201
>sp|Q6P104|QKIB_DANRE Protein quaking-B OS=Danio rerio GN=qkib PE=2 SV=1
Length = 319
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 78/123 (63%), Gaps = 7/123 (5%)
Query: 25 RVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEELRISGDP 84
++ VPV+++P FNFVG++LGP+G + K+L+ +T ++ + G+GS+RD+ KEE+ R G P
Sbjct: 85 KLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR--GKP 142
Query: 85 KFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIRQEQMWEM 144
+ HL E+LHV IT A ++ A+ EV++ LVP D +++ Q+ E+
Sbjct: 143 NWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLLVPAAEG-----EDSLKKMQLMEL 197
Query: 145 QIL 147
IL
Sbjct: 198 AIL 200
>sp|Q91XU1|QKI_RAT Protein quaking OS=Rattus norvegicus GN=Qki PE=1 SV=2
Length = 341
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 81/128 (63%), Gaps = 7/128 (5%)
Query: 20 IKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEELR 79
+++ ++ VPV+++P FNFVG++LGP+G + K+L+ +T ++ + G+GS+RD+ KEE+ R
Sbjct: 80 VQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 139
Query: 80 ISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIRQE 139
G P + HL E+LHV IT A ++ A+ EV++ LVP D +++
Sbjct: 140 --GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEG-----EDSLKKM 192
Query: 140 QMWEMQIL 147
Q+ E+ IL
Sbjct: 193 QLMELAIL 200
>sp|Q5W9D5|QKI_PIG Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1
Length = 341
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 81/128 (63%), Gaps = 7/128 (5%)
Query: 20 IKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEELR 79
+++ ++ VPV+++P FNFVG++LGP+G + K+L+ +T ++ + G+GS+RD+ KEE+ R
Sbjct: 80 VQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 139
Query: 80 ISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIRQE 139
G P + HL E+LHV IT A ++ A+ EV++ LVP D +++
Sbjct: 140 --GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEG-----EDSLKKM 192
Query: 140 QMWEMQIL 147
Q+ E+ IL
Sbjct: 193 QLMELAIL 200
>sp|Q9QYS9|QKI_MOUSE Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1
Length = 341
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 81/128 (63%), Gaps = 7/128 (5%)
Query: 20 IKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEELR 79
+++ ++ VPV+++P FNFVG++LGP+G + K+L+ +T ++ + G+GS+RD+ KEE+ R
Sbjct: 80 VQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 139
Query: 80 ISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIRQE 139
G P + HL E+LHV IT A ++ A+ EV++ LVP D +++
Sbjct: 140 --GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEG-----EDSLKKM 192
Query: 140 QMWEMQIL 147
Q+ E+ IL
Sbjct: 193 QLMELAIL 200
>sp|Q96PU8|QKI_HUMAN Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1
Length = 341
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 81/128 (63%), Gaps = 7/128 (5%)
Query: 20 IKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEELR 79
+++ ++ VPV+++P FNFVG++LGP+G + K+L+ +T ++ + G+GS+RD+ KEE+ R
Sbjct: 80 VQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 139
Query: 80 ISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIRQE 139
G P + HL E+LHV IT A ++ A+ EV++ LVP D +++
Sbjct: 140 --GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEG-----EDSLKKM 192
Query: 140 QMWEMQIL 147
Q+ E+ IL
Sbjct: 193 QLMELAIL 200
>sp|Q5W9D6|QKI_HORSE Protein quaking OS=Equus caballus GN=QKI PE=2 SV=1
Length = 341
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 81/128 (63%), Gaps = 7/128 (5%)
Query: 20 IKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEELR 79
+++ ++ VPV+++P FNFVG++LGP+G + K+L+ +T ++ + G+GS+RD+ KEE+ R
Sbjct: 80 VQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 139
Query: 80 ISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIRQE 139
G P + HL E+LHV IT A ++ A+ EV++ LVP D +++
Sbjct: 140 --GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEG-----EDSLKKM 192
Query: 140 QMWEMQIL 147
Q+ E+ IL
Sbjct: 193 QLMELAIL 200
>sp|Q7JJZ8|QKI_FELCA Protein quaking OS=Felis catus GN=QKI PE=2 SV=1
Length = 341
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 81/128 (63%), Gaps = 7/128 (5%)
Query: 20 IKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEELR 79
+++ ++ VPV+++P FNFVG++LGP+G + K+L+ +T ++ + G+GS+RD+ KEE+ R
Sbjct: 80 VQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 139
Query: 80 ISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIRQE 139
G P + HL E+LHV IT A ++ A+ EV++ LVP D +++
Sbjct: 140 --GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEG-----EDSLKKM 192
Query: 140 QMWEMQIL 147
Q+ E+ IL
Sbjct: 193 QLMELAIL 200
>sp|Q9GMY1|QKI_CANFA Protein quaking OS=Canis familiaris GN=QKI PE=2 SV=1
Length = 341
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 81/128 (63%), Gaps = 7/128 (5%)
Query: 20 IKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEELR 79
+++ ++ VPV+++P FNFVG++LGP+G + K+L+ +T ++ + G+GS+RD+ KEE+ R
Sbjct: 80 VQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 139
Query: 80 ISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIRQE 139
G P + HL E+LHV IT A ++ A+ EV++ LVP D +++
Sbjct: 140 --GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEG-----EDSLKKM 192
Query: 140 QMWEMQIL 147
Q+ E+ IL
Sbjct: 193 QLMELAIL 200
>sp|Q5W9D7|QKI_BOVIN Protein quaking OS=Bos taurus GN=QKI PE=2 SV=1
Length = 341
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 81/128 (63%), Gaps = 7/128 (5%)
Query: 20 IKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEELR 79
+++ ++ VPV+++P FNFVG++LGP+G + K+L+ +T ++ + G+GS+RD+ KEE+ R
Sbjct: 80 VQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 139
Query: 80 ISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIRQE 139
G P + HL E+LHV IT A ++ A+ EV++ LVP D +++
Sbjct: 140 --GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEG-----EDSLKKM 192
Query: 140 QMWEMQIL 147
Q+ E+ IL
Sbjct: 193 QLMELAIL 200
>sp|Q75GR5|SPIN1_ORYSJ KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica
GN=SPIN1 PE=1 SV=1
Length = 281
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 80/128 (62%), Gaps = 7/128 (5%)
Query: 20 IKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEELR 79
+K +R+ VPV +P FNFVG++LGP+GNSLKR++ T R+ I G+GSI+D KE++LR
Sbjct: 132 VKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDPGKEDKLR 191
Query: 80 ISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIRQE 139
G P + HL + LH+ I A P + AR+ +A + L P S QD+ +++
Sbjct: 192 --GKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDES--QDF---YKRQ 244
Query: 140 QMWEMQIL 147
Q+ E+ +L
Sbjct: 245 QLRELAML 252
>sp|Q9YH18|QKI_CHICK Protein quaking OS=Gallus gallus GN=QKI PE=2 SV=2
Length = 340
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 81/128 (63%), Gaps = 7/128 (5%)
Query: 20 IKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEELR 79
+++ ++ VPV+++P FNFVG++LGP+G + K+L+ +T ++ + G+GS+RD+ KEE+ R
Sbjct: 80 VQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR 139
Query: 80 ISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIRQE 139
G P + HL E+LHV IT A ++ A+ EV++ L+P D +++
Sbjct: 140 --GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLIPAAEG-----EDSLKKM 192
Query: 140 QMWEMQIL 147
Q+ E+ IL
Sbjct: 193 QLMELAIL 200
>sp|Q6P0D0|QKIA_DANRE Protein quaking-A OS=Danio rerio GN=qkia PE=2 SV=2
Length = 341
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 77/123 (62%), Gaps = 7/123 (5%)
Query: 25 RVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEELRISGDP 84
++ VPV+++P +NFVG++LGP+G + K+L+ +T ++ + GR S+RD+ KEE+ R G P
Sbjct: 85 KLFVPVKEYPDYNFVGRILGPRGLTAKQLEAETGCKIMVRGRSSMRDKKKEEQNR--GKP 142
Query: 85 KFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIRQEQMWEM 144
+ HL E+LHV IT A ++ A+ EV++ LVP D +++ Q+ E+
Sbjct: 143 NWEHLNEDLHVLITVEDTQTRAEIKMRRAVEEVKKLLVPAAEG-----EDNLKKMQLMEL 197
Query: 145 QIL 147
IL
Sbjct: 198 AIL 200
>sp|Q17339|GLD1_CAEEL Female germline-specific tumor suppressor gld-1 OS=Caenorhabditis
elegans GN=gld-1 PE=1 SV=1
Length = 463
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 78/128 (60%), Gaps = 7/128 (5%)
Query: 20 IKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEELR 79
I +T ++ VP ++P +NFVG++LGP+G + K+L++DT ++ + G+GS+RD+ KE R
Sbjct: 203 ISITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHR 262
Query: 80 ISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIRQE 139
G + HL ++LHV + H ++ AL +V++ L+P DE++++
Sbjct: 263 --GKANWEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLIPAPEG-----TDELKRK 315
Query: 140 QMWEMQIL 147
Q+ E+ I+
Sbjct: 316 QLMELAII 323
>sp|Q6BSP4|BBP_DEBHA Branchpoint-bridging protein OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=BBP PE=3 SV=2
Length = 518
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 46/61 (75%)
Query: 11 MVDITRDKPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIR 70
M I KP+K ++ +PV+D+P NFVG LLGP+GN+L++LQED+ R+AI G+GS++
Sbjct: 151 MSPIDYRKPVKTYEKIYIPVKDYPDINFVGLLLGPRGNTLRQLQEDSGARLAIRGKGSVK 210
Query: 71 D 71
D
Sbjct: 211 D 211
>sp|Q5AED9|BBP_CANAL Branchpoint-bridging protein OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=BBP PE=3 SV=1
Length = 455
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 18 KPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEE 77
+P + R+ VPV+D+P NFVG L+GP+GN+LK+LQED+ R+ I G+GS+++ +
Sbjct: 144 RPSRTVERLYVPVKDYPDINFVGFLIGPRGNTLKKLQEDSGARLQIRGKGSVKEGKSSDG 203
Query: 78 LRISGDPKFLHLLEELHVEITAFAP 102
S + ++LHV ITA +P
Sbjct: 204 FGSS--QTGTDIQDDLHVLITADSP 226
>sp|Q54BM5|BBP_DICDI Branchpoint-bridging protein OS=Dictyostelium discoideum GN=sf1
PE=3 SV=1
Length = 501
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 33/170 (19%)
Query: 21 KVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEELRI 80
K T ++ +P+++HP++NF+G ++GP+GN+ KR+++++ ++AI G+GS RD
Sbjct: 178 KKTRKIYIPIKNHPEYNFIGLIIGPRGNTQKRMEKESGAKIAIRGKGSSRD--------- 228
Query: 81 SGDPKFLHLLE--ELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIRQ 138
G P L E ELHV +T A+ ++ A VR FL+P + ++R
Sbjct: 229 -GKPTKLQFQENDELHVLLT-----ADTVDQLDKAEVLVREFLIPVEEGKNEHKRQQLR- 281
Query: 139 EQMWEMQ-ILKE-------------DGGAASCSESSESSVNNPLLYAENT 174
++ EM L+E D C E+S S + PL E+
Sbjct: 282 -ELAEMNGTLRERPAYMGNRSWTPVDIKCVQCGETSHPSSDCPLRSNESN 330
>sp|Q750X2|BBP_ASHGO Branchpoint-bridging protein OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=BBP PE=3 SV=2
Length = 507
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 73/131 (55%), Gaps = 13/131 (9%)
Query: 18 KPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEE 77
+P K + +P+ D+P+ NFVG LLGP+GN+LK+LQ+ + ++ I GRGS+++ +
Sbjct: 145 RPSKFQDKYYIPINDYPEINFVGLLLGPRGNTLKQLQQQSGCKIVIRGRGSVKEGKAATD 204
Query: 78 LRISGDPK-FLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEI 136
L PK +++ E LH I+ A+ +I + V ++ S + +++
Sbjct: 205 L-----PKGAMNMNEPLHCVIS-----ADTEEKIPLGINAVESIIIKAITS--PEGQNDL 252
Query: 137 RQEQMWEMQIL 147
++ Q+ E+ +L
Sbjct: 253 KRGQLRELAVL 263
>sp|Q12186|BBP_YEAST Branchpoint-bridging protein OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MSL5 PE=1 SV=1
Length = 476
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 18 KPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEE 77
+P K + +PV +P NFVG LLGP+G +L++LQED+ ++AI GRGS+++ +
Sbjct: 144 RPTKFQDKYYIPVDQYPDVNFVGLLLGPRGRTLRKLQEDSNCKIAIRGRGSVKEGKNASD 203
Query: 78 LRISGDPKFLHLLEELHVEITA 99
L P ++ + LH I A
Sbjct: 204 L----PPGAMNFEDPLHCLIIA 221
>sp|O74555|BBP_SCHPO Branchpoint-bridging protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=bpb1 PE=1 SV=1
Length = 587
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 75/130 (57%), Gaps = 12/130 (9%)
Query: 18 KPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEE 77
+P K +V VPV+D+P+ NF+G L+GP+G++LK ++ + ++AI G+GS+++ +
Sbjct: 182 RPAKTQEKVYVPVKDYPEINFIGLLIGPRGHTLKDMEAKSGAKIAIRGKGSVKEGKGRSD 241
Query: 78 LRISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIR 137
+ G+ + E+LH +T A++ +I +A+ + + T + + ++++
Sbjct: 242 PSVRGN-----MEEDLHCLVT-----ADSEDKINHAIKLIDNVIQ--TAASVPEGQNDLK 289
Query: 138 QEQMWEMQIL 147
+ Q+ ++ L
Sbjct: 290 RNQLRQLATL 299
>sp|Q6FW77|BBP_CANGA Branchpoint-bridging protein OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=BBP
PE=3 SV=1
Length = 465
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 16/155 (10%)
Query: 18 KPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEE 77
+P + +PV +P+ NFVG LLGP+G +L+++QED+ ++AI GRGS+++ +
Sbjct: 130 RPTTFQEKYYIPVSQYPQINFVGLLLGPRGKTLRKMQEDSGCKIAIRGRGSVKEGKTSSD 189
Query: 78 LRISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFTRSLFQDYNDEIR 137
L P + + LH I A+ +I + R ++ S + +E++
Sbjct: 190 L----PPGAMDFSDPLHCLII-----ADNEEKIENGIKACRNIVIKAVTS--PEGQNELK 238
Query: 138 QEQMWEMQ----ILKEDGG-AASCSESSESSVNNP 167
+ Q+ E+ L+ED A+C + P
Sbjct: 239 RGQLRELAELNGTLREDNRPCATCGQQGHKKYECP 273
>sp|Q8NIW7|BBP_NEUCR Branchpoint-bridging protein OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=bpb-1 PE=3 SV=1
Length = 607
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 18 KPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRD-RHKEE 76
+P K +V VPV D+P+ NF+G L+GP+GN+LK+++ ++ ++AI G+GS+++ + + +
Sbjct: 192 RPTKTQEKVYVPVNDYPEINFIGLLIGPRGNTLKKMETESGAKIAIRGKGSVKEGKGRSD 251
Query: 77 ELRISGDPKFLHLL 90
S + LH L
Sbjct: 252 AAHSSNQEEDLHCL 265
>sp|Q4WXV6|BBP_ASPFU Branchpoint-bridging protein OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=bbp PE=3
SV=1
Length = 566
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 18 KPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRD-RHKEE 76
+P K +V VPV D+P+ NF+G L+GP+GN+LK+++ ++ ++AI G+GS+++ + + +
Sbjct: 177 RPTKTQEKVYVPVNDYPEINFIGLLIGPRGNTLKKMEAESGAKIAIRGKGSVKEGKGRSD 236
Query: 77 ELRISGDPKFLHLL 90
S + LH L
Sbjct: 237 AAHASNQEEDLHCL 250
>sp|P0CO44|BBP_CRYNJ Branchpoint-bridging protein OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=BBP PE=3 SV=1
Length = 546
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 5 EPHGRKMVDITRDKPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAIL 64
+P+ R VD + + +V +PV++ P+ NF G L+GP+GNSLK+++ ++ +++I
Sbjct: 229 DPNFRPPVDFQHKRGSRPQDKVYIPVKEFPEINFFGLLVGPRGNSLKKMERESGAKISIR 288
Query: 65 GRGSIRDRHKEEELRISGDPKFLHLLEELHVEITA 99
G+GS+ KE + R P+ +ELH ITA
Sbjct: 289 GKGSV----KEGKGRAGNFPQDEE--DELHCLITA 317
>sp|P0CO45|BBP_CRYNB Branchpoint-bridging protein OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=BBP PE=3 SV=1
Length = 546
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 5 EPHGRKMVDITRDKPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAIL 64
+P+ R VD + + +V +PV++ P+ NF G L+GP+GNSLK+++ ++ +++I
Sbjct: 229 DPNFRPPVDFQHKRGSRPQDKVYIPVKEFPEINFFGLLVGPRGNSLKKMERESGAKISIR 288
Query: 65 GRGSIRDRHKEEELRISGDPKFLHLLEELHVEITA 99
G+GS+ KE + R P+ +ELH ITA
Sbjct: 289 GKGSV----KEGKGRAGNFPQDEE--DELHCLITA 317
>sp|Q6C187|BBP_YARLI Branchpoint-bridging protein OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=BBP PE=3 SV=1
Length = 605
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 21/163 (12%)
Query: 6 PHGRKMVDITRDKPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILG 65
P+ R VD KP K V +PV ++P NF+G+LLG +G +LK++++++ ++ I G
Sbjct: 165 PNYRPPVDYH--KPAKTQEVVYIPVNEYPDINFIGQLLGARGKTLKKMEQESGAKICIRG 222
Query: 66 RGSIRDRHKEEELRISGDPKFLHLLEELHVEITAFAPPAEAHARIAYALAEVRRFLVPFT 125
RGS++ ++ P ++LH I +E +IA A+ V++ + T
Sbjct: 223 RGSVKQGKGRTDI-----PFQSTAEDDLHCLII-----SEDEEKIARAVQLVQQVID--T 270
Query: 126 RSLFQDYNDEIRQEQMWEMQ----ILKED---GGAASCSESSE 161
+ + +E+++ Q+ E+ L++D GGA S E
Sbjct: 271 AASVPEGQNELKRSQLRELAALNGTLRDDENYGGAPQSSSGDE 313
>sp|Q64213|SF01_MOUSE Splicing factor 1 OS=Mus musculus GN=Sf1 PE=1 SV=6
Length = 653
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 21 KVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRH--KEEEL 78
+V+ +V++P ++P+ NFVG L+GP+GN+LK ++++ ++ I G+GS+++ +++
Sbjct: 135 RVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQ 194
Query: 79 RISGDPKFLHLL 90
+ G+ + LH L
Sbjct: 195 MLPGEDEPLHAL 206
>sp|Q15637|SF01_HUMAN Splicing factor 1 OS=Homo sapiens GN=SF1 PE=1 SV=4
Length = 639
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 21 KVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRH--KEEEL 78
+V+ +V++P ++P+ NFVG L+GP+GN+LK ++++ ++ I G+GS+++ +++
Sbjct: 135 RVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQ 194
Query: 79 RISGDPKFLHLL 90
+ G+ + LH L
Sbjct: 195 MLPGEDEPLHAL 206
>sp|Q4P0H7|BBP_USTMA Branchpoint-bridging protein OS=Ustilago maydis (strain 521 / FGSC
9021) GN=BBP PE=3 SV=1
Length = 625
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 23 TIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDTMTRMAILGRGSIRDRHKEEELRISG 82
T +V +P+++ P+ F G L+GP+GN+LK ++ + +++I G+GS+ K + ++
Sbjct: 249 TEKVYLPIKEFPEIKFFGLLVGPRGNTLKTMERQSGAKISIRGKGSV----KTGKGKMDA 304
Query: 83 DPKFLHLLEELHVEITA 99
D EE+H +TA
Sbjct: 305 D----EDEEEMHCVVTA 317
>sp|Q9PW80|IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Danio rerio
GN=igf2bp3 PE=1 SV=1
Length = 582
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 3 HQEPHG-----RKMVDITRDKPIKVTIRVIVPVRDHPKFNFVGKLLGPKGNSLKRLQEDT 57
H P G R +++I + + I I +P++ NFVG+L+G +G +LK++++DT
Sbjct: 246 HSTPEGCSSACRNIMEIMQKEAIDTKITEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDT 305
Query: 58 MTRMAI 63
T++ I
Sbjct: 306 DTKITI 311
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,402,686
Number of Sequences: 539616
Number of extensions: 4086975
Number of successful extensions: 10437
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 10301
Number of HSP's gapped (non-prelim): 155
length of query: 267
length of database: 191,569,459
effective HSP length: 115
effective length of query: 152
effective length of database: 129,513,619
effective search space: 19686070088
effective search space used: 19686070088
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)