BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15801
(318 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|332375921|gb|AEE63101.1| unknown [Dendroctonus ponderosae]
Length = 442
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 88/134 (65%)
Query: 143 SPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEF 202
S D+++ NK+ VV+ SPI+R+S+ F+AGAR ET +N+G+THVLR AAGLST
Sbjct: 30 SYDVKTSLLPNKLVVVAAENESPISRVSIVFRAGARNETAENVGVTHVLRVAAGLSTRNK 89
Query: 203 THFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDL 262
+ F I+R+VQQ G +L AT DRE I YT+E R+ + FL V + F+PWEV +L
Sbjct: 90 SQFAIVRNVQQLGANLIATADRETISYTLEGTRQAVEQALPFLTEVATQQVFKPWEVVEL 149
Query: 263 TPRLKYDRLTRPSQ 276
+ RLK + RP Q
Sbjct: 150 SDRLKLELAVRPLQ 163
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 18/141 (12%)
Query: 4 KEALAFAVLKYALGAGP-AKTGKNQRSTNSK---GLSRTPGRESLDESHH---------F 50
KEA+A AVL+ ALG GP K N SK G P S +++
Sbjct: 273 KEAVAAAVLQRALGVGPQIKWSTNDNGILSKAIAGACSEPFASSAIIANYSDTGLVGVLL 332
Query: 51 SPP-----QALQASIDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTT 105
+ P + ++ ++ V++ + DAD+ARGK LK + E+ V + QAV T
Sbjct: 333 AAPARSAGKLVEGAVKVLKCGSVSDADVARGKNQLKASVLLELESGSRAVQLLGTQAVLT 392
Query: 106 GVVKSLPDLLAEVEAVSSSDV 126
G S +L + +++V++ DV
Sbjct: 393 GAAISPCELASAIDSVTTGDV 413
>gi|307205462|gb|EFN83794.1| Cytochrome b-c1 complex subunit 2, mitochondrial [Harpegnathos
saltator]
Length = 445
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 95/147 (64%), Gaps = 3/147 (2%)
Query: 130 RSFAAQPATKALFS--PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGI 187
R +AA AT+ + P++Q +S NKV V ++N +PIA++SV F+AG+R ET + G+
Sbjct: 17 RHYAAAAATQCSSAAVPELQVLSS-NKVTVATINNNNPIAQVSVIFRAGSRNETYETQGV 75
Query: 188 THVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLAS 247
H LR AGLST + FGI R++QQ GG+L AT DRE I YT++ R ++ + FL
Sbjct: 76 AHHLRICAGLSTCRSSVFGITRNIQQLGGNLTATTDRESIAYTLQITRDKLNNALTFLED 135
Query: 248 VVGKTEFRPWEVSDLTPRLKYDRLTRP 274
V + F+PWE+SD PRL+Y+ T P
Sbjct: 136 VATQQVFKPWELSDQLPRLRYELSTVP 162
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 4 KEALAFAVLKYALGA-GP-----AKTGKNQRSTNSKGLSRTPGRESLDESH--------- 48
K+ LA+AVL+ +G+ GP + T QR +S + + + S+
Sbjct: 274 KDVLAYAVLQRTVGSDGPRVKWGSSTSPLQRQVSSAASADQFAISAFNASYSDSGLFGFI 333
Query: 49 HFSPPQA----LQASIDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVT 104
S P +A+ ++ I DADIARGKA+LK + + + ++++ +QA+
Sbjct: 334 MCSMPSVAGSVTKAAASYLKSPKISDADIARGKAILKAEILYAADDCAMLLENLGQQALF 393
Query: 105 TGVVKSLPDLLAEVEAVSSSDV 126
G V DL+AEV+ +S SDV
Sbjct: 394 KGRVYKPADLVAEVDKISVSDV 415
>gi|163838684|ref|NP_001106225.1| ubiquinol-cytochrome c reductase core protein II [Bombyx mori]
gi|87248249|gb|ABD36177.1| ubiquinol-cytochrome c reductase core protein II [Bombyx mori]
Length = 437
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 87/131 (66%)
Query: 146 IQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHF 205
IQS NK V +++ SP+ R+++AFKAG+RYE LG++HVLRSAAGL+T+ + F
Sbjct: 32 IQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSF 91
Query: 206 GIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPR 265
I R + Q G + A+ DRE I YT+EA + ++ + L ++V EFRPWE++D PR
Sbjct: 92 LIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLVSNQEFRPWELNDNAPR 151
Query: 266 LKYDRLTRPSQ 276
LKYD ++ P Q
Sbjct: 152 LKYDIISLPPQ 162
>gi|389611395|dbj|BAM19309.1| ubiquinol-cytochrome c reductase complex core protein [Papilio
polytes]
Length = 216
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 87/143 (60%)
Query: 134 AQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRS 193
AQ A A P +Q+ NK V + N SP+ R+++AFKAG+RYE LG+ HVLRS
Sbjct: 20 AQTAPAAKKEPKLQTSVLPNKTFVAAFNNGSPVTRVTIAFKAGSRYEPQTELGLAHVLRS 79
Query: 194 AAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTE 253
AAGLST+ + + I R + Q G S A+ DRE + YT+EA + + ++L +V E
Sbjct: 80 AAGLSTKNSSAYIIRRQLNQIGASFTASGDREFVYYTVEATQDNLKTALEYLNKIVSNQE 139
Query: 254 FRPWEVSDLTPRLKYDRLTRPSQ 276
FRPWE++D PRL+YD P Q
Sbjct: 140 FRPWELTDNLPRLRYDIAALPPQ 162
>gi|389609555|dbj|BAM18389.1| ubiquinol-cytochrome c reductase complex core protein [Papilio
xuthus]
Length = 438
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 88/143 (61%)
Query: 134 AQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRS 193
AQ A A P +Q+ NK V +++ SP+ R+++AFKAG+RYE LG+ HVLRS
Sbjct: 20 AQTAPVAKKEPRLQTSVLPNKTFVAALDNGSPVTRLTIAFKAGSRYEPQTELGLAHVLRS 79
Query: 194 AAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTE 253
AAGLST+ + + I R + Q G S A+ DRE I YT+EA + + ++L +V E
Sbjct: 80 AAGLSTKNSSAYMIRRQLTQIGASFTASGDREFIYYTVEATQDNLKTALEYLNKIVSNQE 139
Query: 254 FRPWEVSDLTPRLKYDRLTRPSQ 276
FRPWE++D PRL+YD P Q
Sbjct: 140 FRPWELTDNLPRLRYDIAALPPQ 162
>gi|307191193|gb|EFN74890.1| Cytochrome b-c1 complex subunit 2, mitochondrial [Camponotus
floridanus]
Length = 445
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 85/131 (64%), Gaps = 1/131 (0%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P++Q S NKV V +++ SPIA++S+ F+ G+R ET G+TH LR AAGLST T
Sbjct: 34 PELQV-LSNNKVTVAAIDNNSPIAQVSIIFRTGSRNETYSTQGLTHHLRIAAGLSTCRST 92
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLT 263
FGII+++QQ GG+L+AT DRE + YT++ R ++ FL V + F+PWE+ D
Sbjct: 93 TFGIIKNIQQLGGNLFATTDREHVAYTLQITRDKLDKTLNFLEDVATQQVFKPWEIPDQL 152
Query: 264 PRLKYDRLTRP 274
PRL+Y+ P
Sbjct: 153 PRLRYELSMVP 163
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 18/141 (12%)
Query: 4 KEALAFAVLKYALGAGP-AKTGKN----QRSTNS----KGLSRTPGRESLDESHHF---- 50
K+A+ +AVL+ A+G+GP K G QR +S + S +S F
Sbjct: 275 KDAITYAVLQRAVGSGPRVKWGSTVSPLQRELSSAVKADDFAALAFNASYSDSGLFGVVL 334
Query: 51 -SPPQA----LQASIDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTT 105
S P +A+ +R I DAD+ARGKA LK + + + + ++++ +QA+
Sbjct: 335 SSVPSVAGSITKAAAAYLRSPKISDADVARGKATLKAEILYAADNEPALLENLGQQAILK 394
Query: 106 GVVKSLPDLLAEVEAVSSSDV 126
G V L+AEV+ V++S+V
Sbjct: 395 GRVYKPSTLVAEVDKVTASEV 415
>gi|157109295|ref|XP_001650609.1| ubiquinol-cytochrome c reductase complex core protein [Aedes
aegypti]
gi|157109297|ref|XP_001650610.1| ubiquinol-cytochrome c reductase complex core protein [Aedes
aegypti]
gi|157109299|ref|XP_001650611.1| ubiquinol-cytochrome c reductase complex core protein [Aedes
aegypti]
gi|108879066|gb|EAT43291.1| AAEL005269-PA [Aedes aegypti]
gi|108879067|gb|EAT43292.1| AAEL005269-PB [Aedes aegypti]
gi|108879068|gb|EAT43293.1| AAEL005269-PC [Aedes aegypti]
Length = 441
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 87/134 (64%)
Query: 143 SPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEF 202
S ++Q NK+ V S + +AR+S+ ++AG+R+E+ DNLG +HVLR+AAGLST+
Sbjct: 32 SAEVQCSNLPNKMTVASAESGAAVARVSIVYRAGSRHESADNLGASHVLRNAAGLSTKTA 91
Query: 203 THFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDL 262
T FGI R++QQ G SL AT DRE I YT+ + E+ KFL + F+PWE++DL
Sbjct: 92 TTFGITRNLQQVGASLTATSDRETITYTVAVTKDELETGLKFLEAAATGQVFKPWELADL 151
Query: 263 TPRLKYDRLTRPSQ 276
T R+K D P++
Sbjct: 152 TTRIKADIARVPTE 165
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 13/140 (9%)
Query: 2 SAKEALAFAVLKYALGAGPA-KTGKNQRSTN---SKGLSRTPGRESLDESHHFS------ 51
S E LA VL+ A G GP K G N G++ + S ++ F
Sbjct: 274 SMNECLANYVLQCAAGTGPVTKRGANNGILTKQLGSGVASSALYSSYSDNGLFGFVVAGD 333
Query: 52 ---PPQALQASIDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTTGVV 108
QA++ + +R + DAD+ARGKA + +A+ E D+ + QA G +
Sbjct: 334 AKEVGQAVETGVKGLRSLNVSDADVARGKAGVYSWIAEYMENHDTLAFDLGEQAALLGKI 393
Query: 109 KSLPDLLAEVEAVSSSDVSA 128
D+LA +E+VS+SDV A
Sbjct: 394 YKKADILAAIESVSTSDVQA 413
>gi|348502449|ref|XP_003438780.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Oreochromis niloticus]
Length = 448
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 92/145 (63%), Gaps = 4/145 (2%)
Query: 130 RSFAAQPATKAL---FSP-DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNL 185
R +AAQ A K F P D+Q + + + S+ SP ++I V KAG RYETP+N
Sbjct: 13 RFYAAQAARKVEVTGFHPQDVQVTRLPSGLVIASLENYSPASKIGVFIKAGCRYETPENQ 72
Query: 186 GITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFL 245
G+TH+LR A+GL+T+ + F I R ++ GGSL T RE + YT++ +R ++ V ++L
Sbjct: 73 GVTHLLRLASGLTTKGASAFKICRGIEAVGGSLSVTSSRENMTYTVDCLRDDVDTVMEYL 132
Query: 246 ASVVGKTEFRPWEVSDLTPRLKYDR 270
+V EFRPWEVSDLTP++K D+
Sbjct: 133 INVTTAPEFRPWEVSDLTPKVKVDK 157
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 22/162 (13%)
Query: 1 ASAKEALAFAVLKYALGAGP-AKTGKNQRSTNSKGLSR--------TPGRESLDESHHFS 51
A EALAF+VL++ LGAGP K G S +G+S+ T S +S F
Sbjct: 273 AGTSEALAFSVLQHLLGAGPHVKRGAGVASKLVQGVSKATADPFDVTAFNTSYSDSGLFG 332
Query: 52 PPQALQASI--DVVRGA----------GIKDADIARGKALLKRHLADSFETLDSTVDSVV 99
QA+ DV++ A G+ AD+ R KA LK H S ET + ++++
Sbjct: 333 VYTISQAAAAGDVIKAALAQVKAVADGGVTAADLTRAKAQLKCHYLMSLETSEGLLEAMG 392
Query: 100 RQAVTTGVVKSLPDLLAEVEAVSSSDVS-AKRSFAAQPATKA 140
QA+T +S ++ +++ +S +DV+ A ++F + T A
Sbjct: 393 SQALTDASYQSPEEISKKIDNISLTDVANAAKTFVSGKKTMA 434
>gi|47226060|emb|CAG04434.1| unnamed protein product [Tetraodon nigroviridis]
Length = 454
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
Query: 142 FSP-DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTE 200
F P D+Q + + + S+ SP ++I V KAG RYETPDN G+TH+LR A+ L+T+
Sbjct: 34 FPPQDVQVTRLPSGLVIASLENYSPASKIGVFIKAGCRYETPDNQGVTHLLRLASSLTTK 93
Query: 201 EFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVS 260
+ F I R V+ GGSL T RE + YT++ +R +I V ++L +V EFRPWEVS
Sbjct: 94 GASAFKICRGVEAVGGSLSVTSSRENMTYTVDCLRDDIDTVMEYLINVTTAPEFRPWEVS 153
Query: 261 DLTPRLKYDR 270
+LTPRLK D+
Sbjct: 154 ELTPRLKVDK 163
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 1 ASAKEALAFAVLKYALGAGP-AKTGKNQRSTNSKGLSRTPG--------RESLDESHHFS 51
A EAL F VL++ LGAGP K G N + +G+++ + +S F
Sbjct: 279 AGTSEALVFGVLQHVLGAGPRVKRGSNTTNKLVQGVAKATADPFDVSAFSANYSDSGLFG 338
Query: 52 PPQALQAS--IDVVRGA----------GIKDADIARGKALLKRHLADSFETLDSTVDSVV 99
QA+ DVV+ A G+ AD+ + KA LK H S ET + ++ +
Sbjct: 339 IYTISQAAAVTDVVKAAMAQVTAVADGGVTAADLTQAKAQLKGHFLMSLETSEGLLEEMG 398
Query: 100 RQAVTTGVVKSLPDLLAEVEAVSSSDVS 127
QA+ G ++ ++ V+ +DV+
Sbjct: 399 TQALAKGSYCPPEEICKGIDNVTLTDVA 426
>gi|288856313|ref|NP_001165809.1| cytochrome b-c1 complex subunit 2, mitochondrial [Nasonia
vitripennis]
Length = 441
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 78/122 (63%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
NKV + +++ SP+ ++S+ FKAG+R ET D GI+H+LR GL+T T FGI R++Q
Sbjct: 40 NKVTIAAIDNNSPVTQVSIIFKAGSRNETYDTQGISHMLRICTGLTTSHSTAFGITRNIQ 99
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDRLT 272
Q GG L + DRE + YT++ R +G KFL + F+PWE+SD PRL+Y+ T
Sbjct: 100 QLGGDLTTSSDREHVSYTLKITRNNLGPALKFLEDIATAQVFKPWEISDEIPRLRYEVST 159
Query: 273 RP 274
P
Sbjct: 160 IP 161
>gi|332021863|gb|EGI62199.1| Cytochrome b-c1 complex subunit 2, mitochondrial [Acromyrmex
echinatior]
Length = 470
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 88/148 (59%)
Query: 127 SAKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLG 186
S R +AA A + P + NKV V +++ +P+A++S+ F+AG+R ET D G
Sbjct: 14 STVRHYAAAVAAQCYNVPTPELQVLSNKVTVATLDNNNPVAQVSIVFRAGSRNETYDTQG 73
Query: 187 ITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLA 246
I H +R AAGL T T+FGI R++QQ GG+L AT DRE I YT++ + I FL
Sbjct: 74 IAHHIRIAAGLGTCRSTYFGITRNIQQLGGNLTATTDRESIAYTLQITKNNIDKALPFLE 133
Query: 247 SVVGKTEFRPWEVSDLTPRLKYDRLTRP 274
V + F+PWE+S+ PRL+Y+ P
Sbjct: 134 DVATQQVFKPWEISEQLPRLRYELSMIP 161
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 18/147 (12%)
Query: 4 KEALAFAVLKYALGAGP-AKTGKNQR--------STNSKGLSRTPGRESLDESHHF---- 50
K+ALA+AVL+ +G+GP K G + +T++ + + S +S F
Sbjct: 273 KDALAYAVLQRVIGSGPRVKWGASVSPLNKAVAGATSTDQFALSAFNISYSDSGLFGFIL 332
Query: 51 -SPPQA----LQASIDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTT 105
S P +A+ + +R + DADI RGK LK + + + ++++ +QA+
Sbjct: 333 SSVPNVAGSVTKAATEYLRSPKLSDADIVRGKTTLKAEILYATDNDAVYLENMGQQAIIK 392
Query: 106 GVVKSLPDLLAEVEAVSSSDVSAKRSF 132
G DL+AEV+ +++S+V + F
Sbjct: 393 GRAYKPSDLIAEVDKITASEVKSVCRF 419
>gi|432921574|ref|XP_004080207.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Oryzias latipes]
Length = 448
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 92/147 (62%), Gaps = 4/147 (2%)
Query: 128 AKRSFAAQPATKAL---FSP-DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPD 183
++R +AAQ A K F P D+Q + + + S+ SP ++I V KAG RYETP+
Sbjct: 11 SRRLYAAQAARKVEVTGFQPQDVQVTRLPSGLVIASLENYSPASKIGVFVKAGCRYETPE 70
Query: 184 NLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHK 243
N+G+TH+LR A+ L+T+ + F I R V+ GG+L T RE +VYT++ +R + V +
Sbjct: 71 NVGVTHLLRLASNLTTKGASAFKICRGVEAVGGNLSVTSSRENMVYTVDCLRDDFDTVME 130
Query: 244 FLASVVGKTEFRPWEVSDLTPRLKYDR 270
FL +V EFRPWEV DLTPR+ D+
Sbjct: 131 FLINVTTAPEFRPWEVLDLTPRVILDK 157
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 21/144 (14%)
Query: 5 EALAFAVLKYALGAGP-AKTGKNQRSTNSKGLSR--------TPGRESLDESHHFSPPQA 55
EALAF+VL++ LGA P K G + +G+++ + S +S F
Sbjct: 277 EALAFSVLQHLLGAAPNVKRGAAVSNKLVQGVAKATTDPFDVSAFNASYSDSGLFGVYTI 336
Query: 56 LQASIDVVRG------------AGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAV 103
QA+ G+ AD+ R KA LK H S ET + +++V QA+
Sbjct: 337 CQAAAAAEVIRAAVAQVKAVADGGVTAADLTRAKAQLKAHFMMSLETSEGLLEAVGAQAL 396
Query: 104 TTGVVKSLPDLLAEVEAVSSSDVS 127
+G +S ++ ++ VS +DV+
Sbjct: 397 ASGSHQSTEEISKNIDNVSLNDVA 420
>gi|357628386|gb|EHJ77734.1| ubiquinol-cytochrome c reductase core protein II [Danaus plexippus]
Length = 438
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 84/131 (64%)
Query: 146 IQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHF 205
+Q+ NK V +V+ SP+ R+++AFKAG+RYE LG+ HVLRSAAGL+T+ + F
Sbjct: 32 LQTSVLPNKTFVAAVDNGSPVTRVTIAFKAGSRYEPQTELGLAHVLRSAAGLTTKNASAF 91
Query: 206 GIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPR 265
I R + Q G S A+ DRE I YT+EA ++ + +L ++V EFRPWE+SD R
Sbjct: 92 MISRKLSQIGASFNASGDREFIYYTLEASQENLQEALVYLNNIVSNQEFRPWELSDNVSR 151
Query: 266 LKYDRLTRPSQ 276
LK+D L+ Q
Sbjct: 152 LKFDILSLSPQ 162
>gi|410895785|ref|XP_003961380.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Takifugu rubripes]
Length = 454
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 90/151 (59%), Gaps = 10/151 (6%)
Query: 130 RSFAAQPATKALFSP----------DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARY 179
R +AAQ A KA FS D+Q + + + S+ SP ++I V KAG RY
Sbjct: 13 RLYAAQAARKAEFSAAAEHVRFQPQDVQVTRLPSGLVIASLENYSPASKIGVFIKAGCRY 72
Query: 180 ETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIG 239
ETPDN G+TH+LR A+ L+T+ + F I R V+ GGSL T RE + YT++ +R +I
Sbjct: 73 ETPDNQGVTHLLRLASSLTTKGASAFKICRGVEAVGGSLSVTSSRENMTYTVDCLRGDID 132
Query: 240 HVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
V ++L +V EFR WEVS+L PR+K D+
Sbjct: 133 TVMEYLINVTTAQEFRAWEVSELIPRVKVDK 163
>gi|223646668|gb|ACN10092.1| Cytochrome b-c1 complex subunit 2, mitochondrial precursor [Salmo
salar]
gi|223672515|gb|ACN12439.1| Cytochrome b-c1 complex subunit 2, mitochondrial precursor [Salmo
salar]
Length = 451
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 91/149 (61%), Gaps = 8/149 (5%)
Query: 130 RSFAAQPATK-------ALFSP-DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYET 181
R +AAQ A K F P D+Q + + + S++ SP +RI V KAG RYE+
Sbjct: 13 RLYAAQAARKLDVAVEHVKFQPQDVQVTKLPSGLVIASLDNYSPASRIGVFVKAGCRYES 72
Query: 182 PDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHV 241
P+N G+TH+LR AA L+T+ + F I R V+ GGSL T RE ++Y+++ +R I V
Sbjct: 73 PENQGVTHLLRLAANLTTKGASAFRICRGVEAVGGSLGVTSSRENMIYSVDCLRDHIDTV 132
Query: 242 HKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
++L +V EFRPWEVSDLT R+K D+
Sbjct: 133 MEYLINVTTAPEFRPWEVSDLTSRVKMDK 161
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 26/146 (17%)
Query: 5 EALAFAVLKYALGAGP-AKTGKNQRSTNSKGLSRTPGRESLDESHH------------FS 51
E +AF+VL++ LGAGP K G N S +G+++ + D S ++
Sbjct: 281 EVMAFSVLQHVLGAGPHIKRGSNSTSKLIQGVAKATA-DPFDASAFNVNYSDSGLFGVYT 339
Query: 52 PPQALQASIDVVRGA---------GIKDADIARGKALLKRHLADSFETLDSTVDSVVRQA 102
Q+ A DV++ A G+ +AD+ R K LK + E+ + +D++ QA
Sbjct: 340 ISQSAAAG-DVIKAAIGQVKAVARGVSEADLTRAKTQLKAEYLMALESSEGLLDAMGSQA 398
Query: 103 VTTGVVKSLPDLLAE-VEAVSSSDVS 127
+ G S P+ +A+ +++VS++DV+
Sbjct: 399 LARGTYHS-PEAIAQKIDSVSATDVA 423
>gi|197632233|gb|ACH70840.1| ubiquinol-cytochrome c reductase core protein 2 [Salmo salar]
Length = 451
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 91/149 (61%), Gaps = 8/149 (5%)
Query: 130 RSFAAQPATK-------ALFSP-DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYET 181
R +AAQ A K F P D+Q + + + S++ SP +RI V KAG RYE+
Sbjct: 13 RLYAAQAARKLDVAVEHVKFQPQDVQVTKLPSGLVIASLDNYSPASRIGVFVKAGCRYES 72
Query: 182 PDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHV 241
P+N G+TH+LR AA L+T+ + F I R V+ GGSL T RE ++Y+++ +R I V
Sbjct: 73 PENQGVTHLLRLAANLTTKGASAFRICRGVEAVGGSLGVTSSRENMIYSVDCLRDHIDTV 132
Query: 242 HKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
++L +V EFRPWEVSDLT R+K D+
Sbjct: 133 MEYLINVTTAPEFRPWEVSDLTSRVKMDK 161
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 26/146 (17%)
Query: 5 EALAFAVLKYALGAGP-AKTGKNQRSTNSKGLSRTPGRESLDESHH------------FS 51
E +AF+VL++ LGAGP K G N S +G+++ + D S ++
Sbjct: 281 EVMAFSVLQHVLGAGPHIKRGSNSTSKLIQGVAKATA-DPFDASAFNVNYSDSGLFGVYT 339
Query: 52 PPQALQASIDVVRGA---------GIKDADIARGKALLKRHLADSFETLDSTVDSVVRQA 102
Q+ A DV++ A G+ +AD+ R K LK + E+ + +D++ QA
Sbjct: 340 ISQSAAAG-DVIKAAIGQVKAVARGVSEADLTRAKTQLKAEYLMALESSEGLLDAMGSQA 398
Query: 103 VTTGVVKSLPDLLAE-VEAVSSSDVS 127
+ G S P+ +A+ +++VS++DV+
Sbjct: 399 LARGTYHS-PEAIAQKIDSVSATDVA 423
>gi|91078482|ref|XP_975769.1| PREDICTED: similar to AGAP006099-PA isoform 2 [Tribolium castaneum]
gi|270004017|gb|EFA00465.1| hypothetical protein TcasGA2_TC003323 [Tribolium castaneum]
Length = 445
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 88/151 (58%), Gaps = 2/151 (1%)
Query: 128 AKRSFAAQPATK--ALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNL 185
A R +A+ P + ++++ T N + V S PI+RIS+ F+AG+R ET +N
Sbjct: 15 ATRGYASCPPAPIGGIHDYEVKNTTLPNNLVVASAENECPISRISIVFRAGSRNETHENA 74
Query: 186 GITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFL 245
G+TH LR AGLST+ T F I R++QQAG +L AT DRE + YT+E RK + FL
Sbjct: 75 GVTHTLRICAGLSTKNATQFAITRNIQQAGATLTATSDREIVSYTLEGTRKAVEKTLPFL 134
Query: 246 ASVVGKTEFRPWEVSDLTPRLKYDRLTRPSQ 276
V + F+PWEVS+ R + + RP Q
Sbjct: 135 TEVATQQVFKPWEVSENVGRQRLELAIRPPQ 165
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 26/149 (17%)
Query: 2 SAKEALAFAVLKYALGAGP-AKTGKNQRSTNSKGLSRTPGRE--------SLDESHH--- 49
++KEALA +VL+ ALG GP K G S ++ LS+ G E + + S+
Sbjct: 273 NSKEALAVSVLQKALGGGPKVKWG----SVDNGALSKVVGGEGDAKYALNTFNASYSDAG 328
Query: 50 -----FSPPQA-----LQASIDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVV 99
+ P+A +QA+ +++ + DAD+ RGK LK L E+ S +D +
Sbjct: 329 IFGVLIAAPEATAGKIVQAAFKLLKAGNLTDADVNRGKNQLKAALLIKNESGSSAIDFLG 388
Query: 100 RQAVTTGVVKSLPDLLAEVEAVSSSDVSA 128
QA G KS ++AE+++++++DV+A
Sbjct: 389 SQAAVLGSAKSPSQVVAEIDSITTADVNA 417
>gi|383854511|ref|XP_003702764.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Megachile rotundata]
Length = 444
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 75/122 (61%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
NKV + + + SPI ++S+ F+AG+R ET D G+ H LR AG ST + F I R++Q
Sbjct: 41 NKVTIAAYDNNSPITQVSIIFRAGSRNETYDTQGMIHHLRVLAGQSTSRASGFAITRNIQ 100
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDRLT 272
Q GG+L VDRE I YT++ R + KFL V K F+PWEVSD PRL+Y+ +
Sbjct: 101 QLGGNLLTVVDRESIAYTLQITRNNLNDALKFLDCVATKQVFKPWEVSDQAPRLQYELQS 160
Query: 273 RP 274
P
Sbjct: 161 IP 162
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%)
Query: 68 IKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTTGVVKSLPDLLAEVEAVSSSDV 126
+ D DIARGKA+LK + D+ + ++++ QA+ G + + L+A+V+ VS+SDV
Sbjct: 356 LSDKDIARGKAILKAEILDAADNESMLLENMQYQALFKGQISTPATLMADVDKVSASDV 414
>gi|295314952|gb|ADF97626.1| ubiquinol-cytochrome c reductase core protein 2 [Hypophthalmichthys
molitrix]
Length = 211
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 95/158 (60%), Gaps = 15/158 (9%)
Query: 128 AKRSFAAQPATKALFSP---------------DIQSGTSYNKVKVVSVNETSPIARISVA 172
++R +AA ++AL P D+Q + + V S+ SP+++I V
Sbjct: 11 SRRCYAAARRSEALTEPLVTRKPVAATTLPPQDVQVSKLPSGLLVASLENYSPVSKIGVF 70
Query: 173 FKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIE 232
KAG+RYET +NLG+TH+LR A L+T+ + F I R ++ AGGSL T RE +VY+++
Sbjct: 71 VKAGSRYETAENLGVTHMLRLAGNLTTKGASAFRICRGLEAAGGSLSVTSSREHMVYSLD 130
Query: 233 AVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
+R + V ++L +V +FRPWE+SDLTPRLK D+
Sbjct: 131 CLRDDFDGVIEYLINVTTAPDFRPWELSDLTPRLKIDK 168
>gi|193664457|ref|XP_001951283.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Acyrthosiphon pisum]
Length = 443
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 91/146 (62%), Gaps = 1/146 (0%)
Query: 128 AKRSFAAQPATKALFSPDIQSGTSYNKVKVVSV-NETSPIARISVAFKAGARYETPDNLG 186
AKR +A + A ++ P +Q+ N VV+V + + I R+SV F AG+RYE P+N G
Sbjct: 15 AKRCYANKAAALSIKGPQVQTKKLPNSSLVVAVPDYPTNIGRVSVTFLAGSRYEDPENAG 74
Query: 187 ITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLA 246
I+H++RS+AGL+TE + F IIR++ G + Y T DRE I YTIEA ++ + K+
Sbjct: 75 ISHLVRSSAGLTTESSSTFSIIRNLGHLGTNYYVTSDRETITYTIEAHKENLVSSLKYYI 134
Query: 247 SVVGKTEFRPWEVSDLTPRLKYDRLT 272
+ F+PWE+SD R++YD LT
Sbjct: 135 ESISNQTFKPWELSDNLKRVEYDLLT 160
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 18/140 (12%)
Query: 5 EALAFAVLKYALGAGPA-KTGKNQ--------RSTNSKGLSRTPGRESLDESHHF----- 50
++ ++AVL+Y LG G + K G Q +S S + + + +S F
Sbjct: 275 QSASYAVLQYLLGKGSSVKWGVGQGVLEQNILKSNCSDNFAVSAVNYNYSDSGLFGFLLA 334
Query: 51 ----SPPQALQASIDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTTG 106
L+A++ +R + + +++R K L L + E+ ++++ QA TTG
Sbjct: 335 YNGKDVSNVLKAAVQSLRSPTVTETEVSRAKKQLIFSLVSASESSAGVLENITYQAATTG 394
Query: 107 VVKSLPDLLAEVEAVSSSDV 126
V L++ VEAV+ DV
Sbjct: 395 QVIPFEKLISAVEAVTIEDV 414
>gi|380021797|ref|XP_003694743.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Apis florea]
Length = 442
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 85/140 (60%), Gaps = 2/140 (1%)
Query: 133 AAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLR 192
AA + A +P+I+ NKV V + + +PIA++S+ F+AG+R ET D G H LR
Sbjct: 21 AATVSKCAALAPEIK--VLNNKVTVAAYDNHAPIAQVSIVFRAGSRNETHDTQGTAHYLR 78
Query: 193 SAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKT 252
AAGLST T F I R++QQ GG+L TVDRE I YT++ + + ++L K
Sbjct: 79 IAAGLSTSCATSFAITRNIQQRGGNLITTVDRESIAYTLQITKNNLIDALQYLEFAATKQ 138
Query: 253 EFRPWEVSDLTPRLKYDRLT 272
F+PWEV+D PRLKY+ +
Sbjct: 139 IFKPWEVADELPRLKYELFS 158
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 18/141 (12%)
Query: 4 KEALAFAVLKYALGAGPAKTGKNQRSTNSKGLSRTPGRE---------SLDESHHFSPPQ 54
+ALA A+L+ A G+GP + S+ K +S GRE S +S F
Sbjct: 272 NDALACAILQRASGSGPRVKWGSSPSSLHKQVSSAAGREPFGLSTFNASYTDSGLFGVVL 331
Query: 55 A---------LQASIDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTT 105
+A+ + ++ + D DI RGK +LK + D+ + ++S+ +QAV
Sbjct: 332 CSTSNVAGFLTKAACEWLKCFKLSDDDITRGKNILKTEVLDAADNSLCLLESMQQQAVLK 391
Query: 106 GVVKSLPDLLAEVEAVSSSDV 126
G + S L+ +++ +S+SDV
Sbjct: 392 GKISSPTSLVNDIDKISASDV 412
>gi|66523464|ref|XP_625050.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Apis mellifera]
Length = 442
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 85/140 (60%), Gaps = 2/140 (1%)
Query: 133 AAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLR 192
AA + A +P+I+ NKV V + + +PIA++S+ F+AG+R ET D G H LR
Sbjct: 21 AATVSKCAALAPEIK--VLNNKVTVAAYDNHAPIAQVSIVFRAGSRNETHDTQGTAHYLR 78
Query: 193 SAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKT 252
AAGLST T F I R++QQ GG+L TVDRE I YT++ + + ++L K
Sbjct: 79 IAAGLSTSCATSFAITRNIQQRGGNLITTVDRESIAYTLQITKNNLVDALQYLEFAATKQ 138
Query: 253 EFRPWEVSDLTPRLKYDRLT 272
F+PWE++D PRLKY+ +
Sbjct: 139 IFKPWEIADELPRLKYELFS 158
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 18/141 (12%)
Query: 4 KEALAFAVLKYALGAGPAKTGKNQRSTNSKGLSRTPGRE---------SLDESHHFSPPQ 54
K+ALA A+L+ A G+GP + S+ K +S GRE S +S F
Sbjct: 272 KDALACAILQRASGSGPRVKWGSSPSSLHKQISTAAGREPFCLSTFNASYTDSGLFGVVL 331
Query: 55 A---------LQASIDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTT 105
+A+ + ++ + D DI RGK +LK + D+ + ++S+ +QAV
Sbjct: 332 CSTSNVAGFLTKAAYEWLKCFKLSDDDITRGKNILKTEILDAADNSLCLLESMQQQAVLK 391
Query: 106 GVVKSLPDLLAEVEAVSSSDV 126
G V S L +++ +S+SDV
Sbjct: 392 GKVSSPTSLANDIDKISASDV 412
>gi|348537840|ref|XP_003456401.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Oreochromis niloticus]
Length = 459
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 85/137 (62%), Gaps = 1/137 (0%)
Query: 135 QPATKALFSP-DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRS 193
+P+ A P D Q N + + S+ SP++ + V KAG+RYET +N G++HVLR
Sbjct: 32 KPSKGAPLPPQDAQVSKLPNGLVIASLENYSPVSSVGVFVKAGSRYETVENQGVSHVLRL 91
Query: 194 AAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTE 253
AA L+T+ + F I R V+ GGSL T RE +VYT + +R +I + +FL +V E
Sbjct: 92 AANLTTKGASAFKICRSVEAIGGSLSVTSSRETMVYTADCLRDDIDSLMEFLVNVTTAQE 151
Query: 254 FRPWEVSDLTPRLKYDR 270
FRPWEV +LTPR+K D+
Sbjct: 152 FRPWEVDELTPRVKVDK 168
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 21/143 (14%)
Query: 5 EALAFAVLKYALGAGP-AKTGKNQRSTNSKGLSR--------TPGRESLDESHHF----- 50
EA AF+VL+ LGAGP K G + S S+G+++ T S +S F
Sbjct: 288 EANAFSVLQRILGAGPHVKRGSSITSKLSQGIAKATTQPFDATAFNVSYSDSGLFGVYTI 347
Query: 51 ----SPPQALQASIDVVRG---AGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAV 103
S + ++A+I VRG G+ +ADI R K +K S E+ + ++ + QA+
Sbjct: 348 AQAASAGEVIKAAIAQVRGVAEGGVSEADITRAKNQVKAEYLMSMESSEGLLEEIGAQAL 407
Query: 104 TTGVVKSLPDLLAEVEAVSSSDV 126
T GV ++ +L ++AV+ +DV
Sbjct: 408 TAGVYQAPDAVLKAIDAVTQNDV 430
>gi|170052262|ref|XP_001862142.1| ubiquinol-cytochrome c reductase complex core protein [Culex
quinquefasciatus]
gi|167873167|gb|EDS36550.1| ubiquinol-cytochrome c reductase complex core protein [Culex
quinquefasciatus]
Length = 439
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 78/117 (66%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
NK+ V S + +AR+S+ ++AG+R E+ DNLG +HVLR+A+GLST+ T FGI+R++Q
Sbjct: 42 NKLSVASAEPNAAVARVSIVYRAGSRNESGDNLGASHVLRAASGLSTKTATSFGIVRNLQ 101
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYD 269
Q GGSL T DRE + YT+ + + K+L + F+PWE++DLT +K D
Sbjct: 102 QVGGSLTTTADRETVTYTVAVTKDHLETGLKYLEAAATGQVFKPWELADLTALIKTD 158
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 18/138 (13%)
Query: 4 KEALAFAVLKYALGAGPA-KTGKNQRS-------TNSKGLSRTPGRESLDESHHF----- 50
K+ +A+ VL++A G GP K G N + NS L T L F
Sbjct: 275 KDCMAYIVLQHAAGTGPVTKRGGNNGALTKQLSGVNSSTLCSTYSDNGL---FGFVVAGD 331
Query: 51 --SPPQALQASIDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTTGVV 108
+ +A++A + ++ + D D+ARGKA + D E + + QA G V
Sbjct: 332 AKAVGKAVEAGVKGLKSLNVSDEDVARGKAATLGWVVDYVENHSTLAFDLGEQAALLGQV 391
Query: 109 KSLPDLLAEVEAVSSSDV 126
D++A + VS+SDV
Sbjct: 392 YKKADMVAAINGVSTSDV 409
>gi|225708412|gb|ACO10052.1| Ubiquinol-cytochrome-c reductase complex core protein 2,
mitochondrial precursor [Osmerus mordax]
Length = 451
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 82/130 (63%), Gaps = 1/130 (0%)
Query: 142 FSP-DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTE 200
F P D+Q + + + S+ SP ++I V KAG RYE+P N G+TH+LR AA L+T+
Sbjct: 31 FHPQDVQVTKLPSGLVIASLENYSPASKIGVFIKAGCRYESPGNQGVTHLLRLAANLTTK 90
Query: 201 EFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVS 260
+ F I + V+ GGSL T RE +VY+++ +R I V ++L +V EFRPWEVS
Sbjct: 91 GASAFKICQGVEAVGGSLSVTSSRENMVYSVDCLRDHIDTVMEYLINVTTAPEFRPWEVS 150
Query: 261 DLTPRLKYDR 270
DLT R+K D+
Sbjct: 151 DLTSRVKMDK 160
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 27/148 (18%)
Query: 3 AKEALAFAVLKYALGAGP-AKTGKNQRSTNSKGLSRTPGRESLDESHH------------ 49
++EA A++VL++ LGAGP K G N + +G+S+T E D S
Sbjct: 278 SEEAWAYSVLQHVLGAGPYIKRGSNTTNKLIQGISKTT-SEPFDASAFNVSYSDSGLFGV 336
Query: 50 FSPPQALQASIDVVRGA-----GIKDAD-----IARGKALLKRHLADSFETLDSTVDSVV 99
++ QA A+ DV++ A + D D + R K LK S E+ DS ++++
Sbjct: 337 YTISQAASAT-DVIQAAVGQVKAVADGDLDAAALTRAKTQLKAQYLMSLESSDSVLEAMG 395
Query: 100 RQAVTTGVVKSLPDLLAE-VEAVSSSDV 126
QA+ G S P+ +A+ ++ V+++DV
Sbjct: 396 NQALIAGSYLS-PEAVAQKIDTVATADV 422
>gi|350427872|ref|XP_003494910.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Bombus impatiens]
Length = 443
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 72/117 (61%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
NKV V + + SPIA++S+ F+AG+R ET D G H LR AAGL T + F I R++Q
Sbjct: 40 NKVTVAAYDNNSPIAQVSIVFRAGSRNETYDTQGTAHHLRIAAGLGTSVSSAFAITRNIQ 99
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYD 269
Q GG+L +DRE I YT++ R + ++L K F+PWEV D PRLKY+
Sbjct: 100 QHGGNLITILDRESIAYTLQITRDNLADTLQYLECAATKQIFKPWEVQDQLPRLKYE 156
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 22/143 (15%)
Query: 4 KEALAFAVLKYALGAGPAKTGKNQRSTNSKGLSRTPGRE---------SLDESHHFSPPQ 54
KEALA A+L+ A G GP S+ K LS G E S +S F
Sbjct: 273 KEALACAILQRASGNGPRVKWGCSPSSLQKQLSSIAGSEPFGLSTFNASYTDSGLFGV-- 330
Query: 55 ALQASIDVV-----------RGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAV 103
L ++ +VV + I ++++ARGK +LK + D+ + ++S+ +QA+
Sbjct: 331 VLCSTSNVVGSLTKEAVKWLKSLKISESEVARGKNILKTEVLDAADNALCLLESMQQQAL 390
Query: 104 TTGVVKSLPDLLAEVEAVSSSDV 126
G V S + ++ VS+SDV
Sbjct: 391 LKGQVSSPVSIANAIDKVSTSDV 413
>gi|340723986|ref|XP_003400367.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Bombus terrestris]
Length = 443
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 72/117 (61%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
NKV V + + SPIA++S+ F+AG+R ET D G H LR AAGL T + F I R++Q
Sbjct: 40 NKVTVAAYDNNSPIAQVSIVFRAGSRNETYDTQGTAHHLRIAAGLGTSVSSAFAITRNIQ 99
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYD 269
Q GG+L +DRE I YT++ R + ++L K F+PWEV D PRLKY+
Sbjct: 100 QHGGNLITILDRESIAYTLQITRDNLTDTLQYLECAATKQIFKPWEVQDQLPRLKYE 156
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 22/145 (15%)
Query: 4 KEALAFAVLKYALGAGPAKTGKNQRSTNSKGLSRTPGRE---------SLDESHHFSPPQ 54
KEALA AVL+ A G GP S+ K LS G E S +S F
Sbjct: 273 KEALACAVLQRASGDGPRVKWGCSPSSLQKQLSSIAGSEPFGLSTFNASYTDSGLFG--V 330
Query: 55 ALQASIDVV-----------RGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAV 103
L ++ +VV + + ++++ARGK +LK + D+ + ++S+ +QA+
Sbjct: 331 VLCSTSNVVGSLTKEAAKWLKSLKVSESEVARGKNILKTEVLDAADNALCLLESMQQQAL 390
Query: 104 TTGVVKSLPDLLAEVEAVSSSDVSA 128
G V S + ++ +S+SDV A
Sbjct: 391 LKGQVSSPVSIANAIDKLSTSDVKA 415
>gi|158295333|ref|XP_316158.3| AGAP006099-PA [Anopheles gambiae str. PEST]
gi|157015986|gb|EAA11280.3| AGAP006099-PA [Anopheles gambiae str. PEST]
Length = 439
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 84/132 (63%)
Query: 143 SPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEF 202
S ++Q+ T NK+ V S + + ++RIS+ F+AG+R ET D LG HVLR+A GLST+
Sbjct: 32 SAEVQTTTLPNKLVVASADPNAAVSRISIVFRAGSRNETADCLGAAHVLRAAGGLSTKTA 91
Query: 203 THFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDL 262
T FGI R++QQAGGSL DRE + Y++ + ++ K+L + F+PWE+++L
Sbjct: 92 TAFGITRNIQQAGGSLTTAADRELVTYSVAVTKDQLEVGLKYLEATATGQVFKPWELAEL 151
Query: 263 TPRLKYDRLTRP 274
TP ++ + P
Sbjct: 152 TPIIRNELARLP 163
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 20/144 (13%)
Query: 1 ASAKEALAFAVLKYALGAGPAKTGKNQRSTNSKGLSRT-PGRESLDESHHFS-------- 51
+S KEA+AF VL++A G GPA +R TN+ L++ G S + +S
Sbjct: 272 SSMKEAMAFWVLQHAAGVGPA----TKRGTNNGVLTKALAGVNSSSLYNGYSDNGMFGFV 327
Query: 52 -------PPQALQASIDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVT 104
+A++A + ++ + DAD+ARGKA A+ E + + + ++
Sbjct: 328 LSGDAKDAGKAVEAGVKALKSLSVSDADVARGKASALAAAAEYTENQSTLLHQLGEESAL 387
Query: 105 TGVVKSLPDLLAEVEAVSSSDVSA 128
G V DLLA V AV++ DV A
Sbjct: 388 LGQVYKKSDLLAAVNAVTTGDVQA 411
>gi|410902366|ref|XP_003964665.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Takifugu rubripes]
Length = 457
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 85/134 (63%), Gaps = 1/134 (0%)
Query: 138 TKALFSP-DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAG 196
T A F P ++Q N + V S+ SP++R+ V KAG+RYET +N G++HVLR AA
Sbjct: 33 TVAPFPPQNVQVSKLPNGLVVASLENYSPLSRVGVFVKAGSRYETAENQGVSHVLRLAAN 92
Query: 197 LSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRP 256
L+T+ + F I R V+ GGSL T RE +VYT++ +R+ + + ++L V EFRP
Sbjct: 93 LTTKGASAFKICRGVEALGGSLTVTSTRETMVYTVDCLREHLDSLTEYLGDVSTAQEFRP 152
Query: 257 WEVSDLTPRLKYDR 270
WEVS+L R+K D+
Sbjct: 153 WEVSELVSRVKIDK 166
>gi|317419193|emb|CBN81230.1| Cytochrome b-c1 complex subunit 2, mitochondrial [Dicentrarchus
labrax]
Length = 454
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 92/151 (60%), Gaps = 10/151 (6%)
Query: 130 RSFAAQPATKALFS----------PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARY 179
R +AAQ A K F+ D+Q + + + S+ SP ++I V KAG RY
Sbjct: 13 RLYAAQAARKVEFTGAAEHVKFQPQDVQVTRLPSGLVIASMENYSPASKIGVFIKAGCRY 72
Query: 180 ETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIG 239
ETP+N G+TH+LR A+ L+T+ + F I R V+ GGSL + RE ++YT++ +R +I
Sbjct: 73 ETPENQGVTHLLRLASNLTTKGASAFKICRGVEAVGGSLSVSSSRENMIYTVDCLRDDID 132
Query: 240 HVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
V ++L +V EFRPWEVSDLTPR+K D+
Sbjct: 133 TVMEYLINVTTAQEFRPWEVSDLTPRVKMDK 163
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 21/146 (14%)
Query: 3 AKEALAFAVLKYALGAG-PAKTGKNQRSTNSKGLSRTPG--------RESLDESHHFSPP 53
+ EALAF+VL++ LGAG K G S +G+++ S +S F
Sbjct: 281 SSEALAFSVLQHLLGAGLHVKRGSCASSKLVQGVTKATADPFDVSAFNASYSDSGLFGVY 340
Query: 54 QALQASI--DVVRGA----------GIKDADIARGKALLKRHLADSFETLDSTVDSVVRQ 101
QA++ DV++ A G+ AD+ R KA LK H S ET + ++++ Q
Sbjct: 341 TISQAAVAGDVIKAALAQVKAVADGGVTAADLTRAKAQLKGHFLMSLETSEGFLEAMGTQ 400
Query: 102 AVTTGVVKSLPDLLAEVEAVSSSDVS 127
A+ G S ++ +++ VS +DV+
Sbjct: 401 ALAEGTYCSPEEISKKIDNVSLTDVA 426
>gi|47218013|emb|CAG11418.1| unnamed protein product [Tetraodon nigroviridis]
Length = 457
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 79/118 (66%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ SP++R++V KAG+RYET +N G++HVLR AA L+T+ + F I R V+
Sbjct: 49 NGLVIASLENYSPLSRVAVFVKAGSRYETAENQGVSHVLRLAANLTTKGASAFKICRGVE 108
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GGSL T RE +VYT++ +R + + ++L +V EFRPWEVS+L R+K D+
Sbjct: 109 ALGGSLTVTSTRENMVYTVDCLRDHLDSLMEYLVNVTTAQEFRPWEVSELVSRVKIDK 166
>gi|68085024|gb|AAH54137.2| Ubiquinol-cytochrome c reductase core protein II [Danio rerio]
Length = 454
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 90/153 (58%), Gaps = 10/153 (6%)
Query: 128 AKRSFAAQPATKALFSP----------DIQSGTSYNKVKVVSVNETSPIARISVAFKAGA 177
++R +AAQ A K F+ ++Q + + + S+ SP +RI V +AG+
Sbjct: 11 SRRLYAAQAARKVDFAAAGEPLKFVPQEVQVTKLPSGLVIASLENYSPASRIGVLVRAGS 70
Query: 178 RYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKE 237
RYET DNLG+TH+LR AA L+T+ + F I R V+ GGSL + RE + YT++ +R
Sbjct: 71 RYETTDNLGVTHLLRLAASLTTKGASAFRICRGVEAVGGSLRVSSSRETMSYTVDCLRDH 130
Query: 238 IGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
I V ++L +V EFR WEVSDLT R+ D+
Sbjct: 131 IDTVMEYLINVTTAPEFRAWEVSDLTGRVNLDK 163
>gi|52630937|gb|AAU84932.1| putative ubiquinol-cytochrome c reductase [Toxoptera citricida]
Length = 444
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 128 AKRSFAAQPATK-ALFSPDIQSGTSYNKVKVVSV-NETSPIARISVAFKAGARYETPDNL 185
AKR +A++ A ++ P +Q+ N V+V + + I R+SV F AG+RYE P+N
Sbjct: 15 AKRCYASKTAAALSIKGPQVQTKKLPNNSLAVAVPDYPTKIGRVSVTFLAGSRYEDPENA 74
Query: 186 GITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFL 245
GI H++RS+AGLSTE + F IIR++ G + Y + DRE I YTIEA + + K+
Sbjct: 75 GIAHLVRSSAGLSTELSSTFAIIRNLGHLGTNYYVSSDRETITYTIEAHKDNLVSSLKYF 134
Query: 246 ASVVGKTEFRPWEVSDLTPRLKYDRLTRPSQ 276
+ F+PWE+SD R++Y+ LT P +
Sbjct: 135 IESISNQSFKPWELSDNLKRVQYELLTIPPE 165
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 54 QALQASIDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTTGVVKSLPD 113
L+A++ +R + + ++ R K L L + E+ ++++ QAVT+G V
Sbjct: 343 NVLKAAVQSLRSPTVTETEVNRAKKQLIFSLVSASESSVGVLENITHQAVTSGQVLPFEK 402
Query: 114 LLAEVEAVSSSDV 126
L+A VEAV+ DV
Sbjct: 403 LIAAVEAVTVEDV 415
>gi|49904449|gb|AAH76480.1| Zgc:92453 [Danio rerio]
gi|182889130|gb|AAI64681.1| Zgc:92453 protein [Danio rerio]
Length = 460
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 82/126 (65%)
Query: 145 DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTH 204
D+Q + + V S+ SP+++I V KAG+RYET +NLG+TH+LR AA ++T+ +
Sbjct: 44 DVQVSKLPSGLVVASLENYSPVSKIGVFVKAGSRYETAENLGVTHMLRLAANMTTKGASA 103
Query: 205 FGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTP 264
F I R ++ G SL T RE +VY+++ +R + V ++L V +FRPWE++DLTP
Sbjct: 104 FKICRSLEALGASLSVTSSREHMVYSLDFLRDDFDGVIEYLVDVTTAPDFRPWELADLTP 163
Query: 265 RLKYDR 270
R+K D+
Sbjct: 164 RVKIDK 169
>gi|340007414|ref|NP_001002657.2| ubiquinol-cytochrome c reductase core protein II [Danio rerio]
Length = 460
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 82/126 (65%)
Query: 145 DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTH 204
D+Q + + V S+ SP+++I V KAG+RYET +NLG+TH+LR AA ++T+ +
Sbjct: 44 DVQVSKLPSGLVVASLENYSPVSKIGVFVKAGSRYETAENLGVTHMLRLAANMTTKGASA 103
Query: 205 FGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTP 264
F I R ++ G SL T RE +VY+++ +R + V ++L V +FRPWE++DLTP
Sbjct: 104 FKICRSLEALGASLSVTSSREHMVYSLDFLRDDFDGVIEYLVDVTTAPDFRPWELADLTP 163
Query: 265 RLKYDR 270
R+K D+
Sbjct: 164 RVKIDK 169
>gi|215259757|gb|ACJ64370.1| ubiquinol-cytochrome c reductase complex core protein [Culex
tarsalis]
Length = 279
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 78/117 (66%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
+K+ V S + +AR+S+ ++AG+R E+ DNLG +HVLR+A+GLST+ T FGI+R++Q
Sbjct: 42 SKLAVASAEPNAAVARVSIVYRAGSRNESGDNLGASHVLRAASGLSTKTATSFGIVRNLQ 101
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYD 269
Q GGSL T DRE + YT+ + + K+L + F+PWE++D+T +K D
Sbjct: 102 QVGGSLTTTADRETVTYTVAVTKDHLETGLKYLEAAATGQIFKPWELTDVTALIKTD 158
>gi|442747523|gb|JAA65921.1| Putative ubiquinol cytochrome c reductase subunit qcr2 [Ixodes
ricinus]
Length = 455
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 139 KALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLS 198
+AL D++ T + + V S+ SP+ R+++ K GARYE NLGITH LR+AAGL+
Sbjct: 33 EALPKQDVEMTTHPSGLVVTSLENYSPVTRLAIIVKGGARYENGSNLGITHTLRNAAGLA 92
Query: 199 TEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWE 258
T+ + F I ++++ G +L AT RE ++YT+E R E+G KF V F+ WE
Sbjct: 93 TKNCSKFAITKNIEYLGANLTATTTREHLIYTLECNRNEVGTAFKFATEVALCPVFKHWE 152
Query: 259 VSDLTPRLKYD 269
V D P +K D
Sbjct: 153 VDDAAPAMKID 163
>gi|432868341|ref|XP_004071490.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Oryzias latipes]
Length = 456
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 81/133 (60%)
Query: 138 TKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGL 197
+K L D+Q N + + S+ SP++ + V KAG+RYET +N G++HVLR AA L
Sbjct: 34 SKPLPPQDVQVSKLPNGLVIASIENYSPVSSVGVFVKAGSRYETAENQGVSHVLRLAANL 93
Query: 198 STEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPW 257
+T+ + F + R V+ GGSL RE +VYT + +R ++ + +FL +V EFRPW
Sbjct: 94 TTKGASAFKLCRGVEAIGGSLSVKTSRETMVYTADCLRDDLDSLLEFLINVTAAQEFRPW 153
Query: 258 EVSDLTPRLKYDR 270
E+ DL R++ D+
Sbjct: 154 ELQDLITRVQIDK 166
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 5 EALAFAVLKYALGAGP-AKTGKNQRSTNSKGLSR--------TPGRESLDESHHF----- 50
EA AF+VL+ LGAGP K G + S S+G+++ T S +S F
Sbjct: 285 EANAFSVLQRILGAGPHVKRGSSITSKLSQGIAKATTKPFDATAFNASYSDSGLFGVYTI 344
Query: 51 ----SPPQALQASIDVVRG---AGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAV 103
S + ++A++ VRG + +ADI R K +K S E D ++ + Q +
Sbjct: 345 SQADSAGEVIEAALSQVRGVSQGNVSEADITRAKNQVKAEYLMSIEGSDGLMEELGTQVL 404
Query: 104 TTGVVKSLPD-LLAEVEAVS-SSDVSAKRSF 132
TT V PD +L +EAVS + V A ++F
Sbjct: 405 TT-VAYQAPDTVLQAIEAVSQDAVVQAAKTF 434
>gi|403277103|ref|XP_003930216.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Saimiri boliviensis boliviensis]
Length = 429
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 75/118 (63%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P++RI + KAG+RYE NLG TH+LR A+GL+T+ + F I R ++
Sbjct: 45 NGLVIASLENYAPVSRIGLFIKAGSRYEDSSNLGTTHLLRLASGLTTKGASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R ++ + +FL +V EFR WEV D+ P+LK D+
Sbjct: 105 AVGGLLSVTATRENMAYTVECLRGDVDILMEFLLNVTTSPEFRHWEVGDIQPQLKIDK 162
>gi|260801054|ref|XP_002595411.1| hypothetical protein BRAFLDRAFT_119024 [Branchiostoma floridae]
gi|229280657|gb|EEN51423.1| hypothetical protein BRAFLDRAFT_119024 [Branchiostoma floridae]
Length = 455
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 79/124 (63%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + V S+ SP++R+++ KAG+RYET +NLG++H LR +A LST+EF+ F + R V+
Sbjct: 44 NGMVVASLENNSPVSRVALYVKAGSRYETMNNLGVSHALRLSANLSTKEFSAFRLTRGVE 103
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDRLT 272
GGSL A+ RE +VY ++ +R E+ +LAS+V F+PWEVS R+ +
Sbjct: 104 VLGGSLEASGSREHMVYKVDCLRDEMQSTLGYLASIVSAPVFKPWEVSSNEARMAVEMAC 163
Query: 273 RPSQ 276
+Q
Sbjct: 164 LETQ 167
>gi|327290789|ref|XP_003230104.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Anolis carolinensis]
Length = 448
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 86/143 (60%)
Query: 128 AKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGI 187
A+ S AA+ A L +++ N + + S+ SP +RI V KAG+RYE+ NLG
Sbjct: 15 AEASVAAERAKIQLHPQELEITKLPNGLVIASLENHSPASRIGVFIKAGSRYESGTNLGT 74
Query: 188 THVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLAS 247
H+LR A+ L+T+ + F I R ++ GGSL T RE +VY++E +R I V ++L +
Sbjct: 75 AHLLRLASNLTTKGASSFKITRGIEAVGGSLSVTSTRENMVYSVECLRDYIDTVLEYLIN 134
Query: 248 VVGKTEFRPWEVSDLTPRLKYDR 270
V EFR WEV+D+ PRL+ D+
Sbjct: 135 VTTAPEFRRWEVADVNPRLRIDK 157
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 22/152 (14%)
Query: 5 EALAFAVLKYALGAGP-AKTGKNQRSTNSKGLSRTPG--------RESLDESHHFSPPQA 55
EA AF+VL++ LGAGP K G S ++ +S+ + +S F
Sbjct: 277 EANAFSVLQHILGAGPLIKRGSRVTSKLTQAISKASSLPFDAAAFNVNYADSGLFGIYTI 336
Query: 56 LQASI--DVVRGA----------GIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAV 103
QAS+ +V++ A G+ DA++ R K LK S E+ + +D + QA+
Sbjct: 337 SQASVAGEVIKAAVGQAKAISQGGLTDAEVTRAKNQLKAAFLMSVESSEGLLDEIGSQAL 396
Query: 104 TTGVVKSLPDLLAEVEAVSSSD-VSAKRSFAA 134
+G S ++ +++AV+++D V+A + FA+
Sbjct: 397 ASGTYASPATIVEKIDAVTTADIVNAAKKFAS 428
>gi|349803839|gb|AEQ17392.1| putative uqcrc2 protein [Hymenochirus curtipes]
Length = 338
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 85/151 (56%), Gaps = 7/151 (4%)
Query: 128 AKRSFAAQPATKA-------LFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYE 180
++R ++A A K+ L ++Q N + + SV SP+ I V KAG+RYE
Sbjct: 2 SRRCYSAHAAAKSETSGRTHLHPEELQITKLPNGLVIASVENYSPLTNIGVFVKAGSRYE 61
Query: 181 TPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGH 240
+NLG+ HVLR A+ L+T+ + F I R ++ GG L T RE IVY++E +R + +
Sbjct: 62 NANNLGVNHVLRLASNLTTKGMSSFKITRGIEAVGGGLSVTSSRENIVYSVECLRDYVDN 121
Query: 241 VHKFLASVVGKTEFRPWEVSDLTPRLKYDRL 271
V ++L +V EFR WEVSDL + D L
Sbjct: 122 VMEYLINVTTAPEFRRWEVSDLHAKHNDDSL 152
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 20/144 (13%)
Query: 3 AKEALAFAVLKYALGAGPAKTGKNQRSTNSKGLSRTPGR--------ESLDESHHF---- 50
+ EA AF+VL++ LGAGP K G N S S+ +S++ + + +S F
Sbjct: 166 SSEANAFSVLQHILGAGPFKRGNNTSSKLSQAVSKSTNQPFDVSAFNANYSDSGLFGIYA 225
Query: 51 -----SPPQALQASIDVVRG---AGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQA 102
+ + + A+I+ V+ + +AD+ R K+ LK + E+ ++ + QA
Sbjct: 226 ISQATAANEVINAAINQVKAMAQGSVTEADVTRAKSQLKSQYLMTLESSCGLLNEIGSQA 285
Query: 103 VTTGVVKSLPDLLAEVEAVSSSDV 126
+ +G S D ++++V+S+DV
Sbjct: 286 LASGTYTSPADTFKQIDSVTSADV 309
>gi|392883032|gb|AFM90348.1| ubiquinol-cytochrome c reductase core protein II [Callorhinchus
milii]
Length = 457
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%)
Query: 157 VVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGG 216
+ S+ SP ++I V KAG+RYE NLGITH LR AA ++T+ + F I R ++ G
Sbjct: 53 IASLENYSPTSKIGVFIKAGSRYEDAGNLGITHALRLAANMTTKGHSSFKITRGIEAVGS 112
Query: 217 SLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
+L T R+ ++YT++ +R + V ++L +V EFRPWE+S L PR+K DR
Sbjct: 113 TLSVTSTRDNMIYTVDCIRDYVDTVMEYLINVTAAQEFRPWELSALPPRIKVDR 166
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 29/163 (17%)
Query: 1 ASAKEALAFAVLKYALGAGP-AKTGKNQRSTNSKGLSR---TPGRESLDESHH------- 49
A EA AF+VL++ L GP K G N S + +++ P S+ +++
Sbjct: 282 AGTAEAHAFSVLQHILAPGPYIKRGSNVSSKLHQAIAKKTSDPFDVSVFNANYSDSGLFG 341
Query: 50 ---FSPPQALQ-------ASIDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVV 99
S P ++ A I ++ + +ADIA+ K LK + ET D +D +
Sbjct: 342 IYIISQPGSVNDVIGTALAQIGIIAKGNVTEADIAQAKKQLKAKALMAVETSDGLLDEIG 401
Query: 100 RQAVTTGVVKSLPDLLAEVEAVSSSD--------VSAKRSFAA 134
Q + +G +L E+++VS +D VS K+S AA
Sbjct: 402 SQVLASGTYIPTSRVLQEIDSVSLNDVENAAKKFVSGKKSMAA 444
>gi|426381504|ref|XP_004057378.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Gorilla gorilla gorilla]
Length = 453
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 75/118 (63%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ SPI+RI + KAG+RYE +NLG TH+LR + L+T+ + F I R ++
Sbjct: 45 NGLVIASLENYSPISRIGLFIKAGSRYEDFNNLGTTHLLRLTSSLTTKGASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R ++ + +FL +V EFR WEV+DL P+LK D+
Sbjct: 105 AVGGKLSVTATRENMAYTVECLRGDVDILMEFLLNVTTAPEFRRWEVADLQPQLKIDK 162
>gi|449278964|gb|EMC86692.1| Cytochrome b-c1 complex subunit 2, mitochondrial, partial [Columba
livia]
Length = 445
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 74/118 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ SP +RI V KAG+RYET NLG H+LR A+ L+T+ + F I R ++
Sbjct: 37 NGLIIASLENFSPASRIGVFIKAGSRYETTGNLGTAHLLRLASNLTTKGASSFRITRGIE 96
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GGSL RE + Y+IE +R + V ++L +V EFRPWEV++L P+LK D+
Sbjct: 97 AVGGSLSVYSTREKMTYSIECLRNYVDTVMEYLLNVTTAPEFRPWEVTELQPQLKVDK 154
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 25/145 (17%)
Query: 5 EALAFAVLKYALGAGP-AKTGKNQRSTNSKGLSRTPGRESLDESH------------HFS 51
EA AF+VL++ LGAGP K G N S S+G+++ + D S ++
Sbjct: 274 EANAFSVLQHVLGAGPLIKRGSNVTSKLSQGIAKAT-TQPFDASAFNVNYSDSGLFGFYT 332
Query: 52 PPQALQAS---------IDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQA 102
QA A I V G+ + DI K LK S E+ + ++ + ++
Sbjct: 333 ISQAANAGEVIKAAMNQIKAVAQGGVTNDDITTAKNQLKATYLMSVESAEGLLNEIGSES 392
Query: 103 VTTGVVKSLPDLLAE-VEAVSSSDV 126
+ +G S P ++A+ +++V+S+DV
Sbjct: 393 LVSGTHTS-PSVVAQKIDSVTSADV 416
>gi|118098350|ref|XP_424611.2| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Gallus gallus]
Length = 457
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 73/118 (61%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ SP +RI V KAG+RYET NLG H+LR A+ L+T+ + F I R ++
Sbjct: 49 NGLIIASLENFSPASRIGVFIKAGSRYETTANLGTAHLLRLASPLTTKGASSFRITRGIE 108
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GGSL RE + Y +E +R + V ++L +V EFRPWEV+DL P+LK D+
Sbjct: 109 AVGGSLSVYSTREKMTYCVECLRDHVDTVMEYLLNVTTAPEFRPWEVTDLQPQLKVDK 166
>gi|350537117|ref|NP_001233459.1| cytochrome b-c1 complex subunit 2, mitochondrial [Pan troglodytes]
gi|397472695|ref|XP_003807873.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Pan paniscus]
gi|343960020|dbj|BAK63864.1| ubiquinol-cytochrome-c reductase complex core protein 2 [Pan
troglodytes]
gi|410206800|gb|JAA00619.1| ubiquinol-cytochrome c reductase core protein II [Pan troglodytes]
gi|410265148|gb|JAA20540.1| ubiquinol-cytochrome c reductase core protein II [Pan troglodytes]
gi|410299026|gb|JAA28113.1| ubiquinol-cytochrome c reductase core protein II [Pan troglodytes]
gi|410338527|gb|JAA38210.1| ubiquinol-cytochrome c reductase core protein II [Pan troglodytes]
Length = 453
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 75/118 (63%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ SPI+RI + KAG+RYE +NLG TH+LR + L+T+ + F I R ++
Sbjct: 45 NGLVIASLENYSPISRIGLFIKAGSRYEDFNNLGTTHLLRLTSSLTTKGASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R ++ + +FL +V EFR WEV+DL P+LK D+
Sbjct: 105 AVGGKLSVTATRENMAYTVECLRGDVDILMEFLLNVTTAPEFRRWEVADLQPQLKIDK 162
>gi|196049776|pdb|3CWB|B Chain B, Chicken Cytochrome Bc1 Complex Inhibited By An Iodinated
Analogue Of The Polyketide Crocacin-d
gi|196049786|pdb|3CWB|O Chain O, Chicken Cytochrome Bc1 Complex Inhibited By An Iodinated
Analogue Of The Polyketide Crocacin-d
gi|228312414|pdb|3H1H|B Chain B, Cytochrome Bc1 Complex From Chicken
gi|228312424|pdb|3H1H|O Chain O, Cytochrome Bc1 Complex From Chicken
gi|228312436|pdb|3H1I|B Chain B, Stigmatellin And Antimycin Bound Cytochrome Bc1 Complex
From Chicken
gi|228312446|pdb|3H1I|O Chain O, Stigmatellin And Antimycin Bound Cytochrome Bc1 Complex
From Chicken
gi|228312459|pdb|3H1J|B Chain B, Stigmatellin-Bound Cytochrome Bc1 Complex From Chicken
gi|228312469|pdb|3H1J|O Chain O, Stigmatellin-Bound Cytochrome Bc1 Complex From Chicken
gi|228312483|pdb|3H1K|B Chain B, Chicken Cytochrome Bc1 Complex With Zn++ And An Iodinated
Derivative Of Kresoxim-Methyl Bound
gi|228312493|pdb|3H1K|O Chain O, Chicken Cytochrome Bc1 Complex With Zn++ And An Iodinated
Derivative Of Kresoxim-Methyl Bound
gi|283135344|pdb|3H1L|B Chain B, Chicken Cytochrome Bc1 Complex With Ascochlorin Bound At
Qo And Qi Sites
gi|283135354|pdb|3H1L|O Chain O, Chicken Cytochrome Bc1 Complex With Ascochlorin Bound At
Qo And Qi Sites
gi|285803639|pdb|3L70|B Chain B, Cytochrome Bc1 Complex From Chicken With Trifloxystrobin
Bound
gi|285803649|pdb|3L70|O Chain O, Cytochrome Bc1 Complex From Chicken With Trifloxystrobin
Bound
gi|285803659|pdb|3L71|B Chain B, Cytochrome Bc1 Complex From Chicken With Azoxystrobin
Bound
gi|285803669|pdb|3L71|O Chain O, Cytochrome Bc1 Complex From Chicken With Azoxystrobin
Bound
gi|285803679|pdb|3L72|B Chain B, Chicken Cytochrome Bc1 Complex With Kresoxym-I-Dimethyl
Bound
gi|285803689|pdb|3L72|O Chain O, Chicken Cytochrome Bc1 Complex With Kresoxym-I-Dimethyl
Bound
gi|285803699|pdb|3L73|B Chain B, Cytochrome Bc1 Complex From Chicken With Triazolone
Inhibitor
gi|285803709|pdb|3L73|O Chain O, Cytochrome Bc1 Complex From Chicken With Triazolone
Inhibitor
gi|285803719|pdb|3L74|B Chain B, Cytochrome Bc1 Complex From Chicken With Famoxadone Bound
gi|285803729|pdb|3L74|O Chain O, Cytochrome Bc1 Complex From Chicken With Famoxadone Bound
gi|285803739|pdb|3L75|B Chain B, Cytochrome Bc1 Complex From Chicken With Fenamidone Bound
gi|285803749|pdb|3L75|O Chain O, Cytochrome Bc1 Complex From Chicken With Fenamidone Bound
gi|393715168|pdb|3TGU|B Chain B, Cytochrome Bc1 Complex From Chicken With Pfvs-Designed Moa
Inhibitor Bound
gi|393715178|pdb|3TGU|O Chain O, Cytochrome Bc1 Complex From Chicken With Pfvs-Designed Moa
Inhibitor Bound
Length = 441
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 73/118 (61%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ SP +RI V KAG+RYET NLG H+LR A+ L+T+ + F I R ++
Sbjct: 33 NGLIIASLENFSPASRIGVFIKAGSRYETTANLGTAHLLRLASPLTTKGASSFRITRGIE 92
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GGSL RE + Y +E +R + V ++L +V EFRPWEV+DL P+LK D+
Sbjct: 93 AVGGSLSVYSTREKMTYCVECLRDHVDTVMEYLLNVTTAPEFRPWEVTDLQPQLKVDK 150
>gi|395846112|ref|XP_003795757.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Otolemur garnettii]
Length = 453
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 76/118 (64%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P++RI + KAG+RYE DNLG +H+LR A+ L+T+ + F I R ++
Sbjct: 45 NGLVIASLENYAPVSRIGLFIKAGSRYEDSDNLGTSHLLRLASSLTTKGASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
AGG L T RE I YT+E +R ++ + +FL +V EFR WEV+DL +L+ D+
Sbjct: 105 AAGGKLSVTATRENIAYTVECLRGDVDILMEFLLNVTTAPEFRRWEVADLQSQLRVDK 162
>gi|296219728|ref|XP_002756012.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial
[Callithrix jacchus]
Length = 453
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 76/118 (64%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P++RI + KAG+RYE +NLG TH+LR A+GL+T+ + F I R ++
Sbjct: 45 NGLVIASLENYAPVSRIGLFIKAGSRYEDSNNLGTTHLLRLASGLTTKGASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R ++ + +FL +V EFR WEV ++ P+LK D+
Sbjct: 105 AVGGLLSVTATRENMAYTVECLRGDVDILMEFLLNVTTSPEFRHWEVGEIQPQLKIDK 162
>gi|326929477|ref|XP_003210890.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Meleagris gallopavo]
Length = 233
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 73/118 (61%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ SP +RI V KAG+RYET NLG H+LR A+ L+T+ + F I R ++
Sbjct: 12 NGLIIASLENFSPASRIGVFIKAGSRYETTANLGTAHLLRLASPLTTKGASSFRITRGIE 71
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GGSL RE + Y +E +R + V ++L +V EFRPWEV+DL P+LK D+
Sbjct: 72 AVGGSLSVYSTREKMTYCVECLRDHVDTVMEYLLNVTTAPEFRPWEVTDLQPQLKVDK 129
>gi|395756283|ref|XP_002834002.2| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like,
partial [Pongo abelii]
Length = 160
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 75/118 (63%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +PI+RI + KAG+RYE +NLG TH+LR + L+T+ + F I R ++
Sbjct: 34 NGLVIASLENYAPISRIGLFIKAGSRYEDSNNLGTTHLLRLTSSLTTKGASSFKITRGIE 93
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R ++ + +FL +V EFR WEV++L P+LK D+
Sbjct: 94 AVGGKLSVTATRENMAYTVECLRDDVDILMEFLLNVTTAPEFRRWEVANLQPQLKIDK 151
>gi|449476427|ref|XP_002192654.2| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Taeniopygia guttata]
Length = 482
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 85/150 (56%), Gaps = 7/150 (4%)
Query: 121 VSSSDVSAKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYE 180
VSSS +AK + Q S D++ N + + S+ SP +RI V K G+RYE
Sbjct: 49 VSSSATAAKVKLSPQ-------SEDLEITKLPNGLVIASLENFSPASRIGVFIKTGSRYE 101
Query: 181 TPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGH 240
T NLG H+LR A+ L+T+ + F I R ++ GGSL RE + Y++E +R +
Sbjct: 102 TTSNLGTAHLLRLASNLTTKGASSFRITRGIEAVGGSLSVHATREQMAYSVECLRDYVDT 161
Query: 241 VHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
V ++L +V EFRPWEV+ L P+LK D+
Sbjct: 162 VMEYLLNVTTAPEFRPWEVAALQPQLKVDK 191
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 21/143 (14%)
Query: 5 EALAFAVLKYALGAGP-AKTGKNQRSTNSKGLSRTPGRE--------SLDESHHFS---- 51
EA AF+VL+Y LGAGP K G N S ++G+++ + + +S F
Sbjct: 311 EANAFSVLQYVLGAGPLVKRGSNVTSKLTQGVAKATSQPFDVSAFNVNYSDSGLFGIYTI 370
Query: 52 --PPQA---LQASIDVVRG---AGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAV 103
P A ++A+++ V+ G+ DAD+ K LK + S ET ++ + +++
Sbjct: 371 SQAPNAGEVIKAALNQVKAVAQGGVTDADVTMAKNQLKANYLMSVETSKGLLNEIGTESL 430
Query: 104 TTGVVKSLPDLLAEVEAVSSSDV 126
+G + S ++++V+++DV
Sbjct: 431 VSGTLTSPSAAAQKIDSVATADV 453
>gi|50592988|ref|NP_003357.2| cytochrome b-c1 complex subunit 2, mitochondrial precursor [Homo
sapiens]
gi|21903482|sp|P22695.3|QCR2_HUMAN RecName: Full=Cytochrome b-c1 complex subunit 2, mitochondrial;
AltName: Full=Complex III subunit 2; AltName: Full=Core
protein II; AltName: Full=Ubiquinol-cytochrome-c
reductase complex core protein 2; Flags: Precursor
gi|12653427|gb|AAH00484.1| UQCRC2 protein [Homo sapiens]
gi|13111931|gb|AAH03136.1| Ubiquinol-cytochrome c reductase core protein II [Homo sapiens]
gi|119570977|gb|EAW50592.1| ubiquinol-cytochrome c reductase core protein II, isoform CRA_c
[Homo sapiens]
gi|123980974|gb|ABM82316.1| ubiquinol-cytochrome c reductase core protein II [synthetic
construct]
gi|123995779|gb|ABM85491.1| ubiquinol-cytochrome c reductase core protein II [synthetic
construct]
gi|193787590|dbj|BAG52796.1| unnamed protein product [Homo sapiens]
gi|306921339|dbj|BAJ17749.1| ubiquinol-cytochrome c reductase core protein II [synthetic
construct]
Length = 453
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 74/118 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ SP++RI + KAG+RYE NLG TH+LR + L+T+ + F I R ++
Sbjct: 45 NGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTHLLRLTSSLTTKGASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R ++ + +FL +V EFR WEV+DL P+LK D+
Sbjct: 105 AVGGKLSVTATRENMAYTVECLRGDVDILMEFLLNVTTAPEFRRWEVADLQPQLKIDK 162
>gi|180928|gb|AAA35710.1| core protein II precursor [Homo sapiens]
Length = 453
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 74/118 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ SP++RI + KAG+RYE NLG TH+LR + L+T+ + F I R ++
Sbjct: 45 NGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTHLLRLTSSLTTKGASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R ++ + +FL +V EFR WEV+DL P+LK D+
Sbjct: 105 AVGGKLSVTATRENMAYTVECLRGDVDILMEFLLNVTTAPEFRRWEVADLQPQLKIDK 162
>gi|149636806|ref|XP_001507390.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Ornithorhynchus anatinus]
Length = 454
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 74/118 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P +RI V KAG+RYE NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 46 NGLVIASLENYAPASRIGVFIKAGSRYEDSSNLGTSHLLRLASNLTTKGASSFRITRGIE 105
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R ++ V ++L +V EFR WEV+DL P+LK D+
Sbjct: 106 AVGGKLSVTTTRENMAYTVECLRDDVDTVMEYLLNVTTAPEFRRWEVADLQPQLKIDK 163
>gi|289741745|gb|ADD19620.1| ubiquinol cytochrome c reductase subunit QCR2 [Glossina morsitans
morsitans]
Length = 443
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 86/152 (56%), Gaps = 2/152 (1%)
Query: 126 VSAKRSFAAQPATKALFSP-DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDN 184
V A+R F+A + L P +Q+ NKV V S P+ R+S+ F+AGAR+E ++
Sbjct: 13 VIARRGFSAAANPRPLGQPAQVQTKVLENKVVVASAESQLPVCRVSITFRAGARFENYES 72
Query: 185 LGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKF 244
LG +H+LR A LS++ T F + R++QQ G SL T DRE + YT+E+ + +
Sbjct: 73 LGASHMLRIAGSLSSQNATAFALTRNLQQKGISLSVTSDREVVSYTVESTLDSVECGLHY 132
Query: 245 LASVVGKTEFRPWEVSDLTPRLKYDRLTRPSQ 276
L VV + F+PWE+SD P +K P Q
Sbjct: 133 LQEVV-QPAFKPWELSDAVPWIKTQVAAVPPQ 163
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 18/143 (12%)
Query: 4 KEALAFAVLKYALGAGPAKTGKNQRSTNSKGLSRTPGR-----ESLDESHHFSP------ 52
KEALAF+VL+YA+GAG N + + G +L+ S+ +
Sbjct: 273 KEALAFSVLQYAMGAGSFTKRGNVNGAMGQAVHAAVGEGNFAFAALNASYLDAGLFGFVV 332
Query: 53 -------PQALQASIDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTT 105
+A+ A+ V++ + + D+ RGKALLKR + +++ T + + QA T
Sbjct: 333 SADAQKVGKAISAATKVLKSGSVSENDVNRGKALLKRAVLEAYGTDKDVLTEMGVQACLT 392
Query: 106 GVVKSLPDLLAEVEAVSSSDVSA 128
V+S L++ +++VS+ +V A
Sbjct: 393 KQVQSADALVSAIDSVSAQEVQA 415
>gi|297698294|ref|XP_002826259.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial [Pongo
abelii]
Length = 453
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 75/118 (63%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +PI+RI + KAG+RYE +NLG TH+LR + L+T+ + F I R ++
Sbjct: 45 NGLVIASLENYAPISRIGLFIKAGSRYEDSNNLGTTHLLRLTSSLTTKGASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R ++ + +FL +V EFR WEV++L P+LK D+
Sbjct: 105 AVGGKLSVTATRENMAYTVECLRGDVDILMEFLLNVTTAPEFRRWEVANLQPQLKIDK 162
>gi|348584184|ref|XP_003477852.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Cavia porcellus]
Length = 453
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 74/118 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P +RI V KAG+RYE NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 45 NGLVIASLENYAPASRIGVFIKAGSRYEDSSNLGTSHLLRLASSLTTKGASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R ++ V +FL +V EFR WEV+DL P+L+ D+
Sbjct: 105 AVGGKLSVTATRESMAYTVECLRDDVEIVMEFLLNVTTAPEFRRWEVADLQPQLRIDK 162
>gi|346469357|gb|AEO34523.1| hypothetical protein [Amblyomma maculatum]
Length = 456
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 96/174 (55%), Gaps = 9/174 (5%)
Query: 114 LLAEVEAVSSSDVSAKRSFAAQPATK--------ALFSPDIQSGTSYNKVKVVSVNETSP 165
+ A++ + + A R+F+AQ A K +L D+++ T N + V ++ SP
Sbjct: 1 MAAKIARIPGLKLQAVRAFSAQAAPKVASHTKVESLPKQDVETTTLPNGLVVTALENYSP 60
Query: 166 IARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDRE 225
+ R+++ KAGARYE N GITH LR+AAGL+T+ + F I ++++ GG+L A+ R+
Sbjct: 61 VTRLAIVVKAGARYEDGSNKGITHTLRNAAGLATKSHSKFAITKNIEYVGGNLTASTTRD 120
Query: 226 GIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDRLTRPSQGNE 279
++Y +E R ++ KF + V F+ WEV D P L Y L Q +E
Sbjct: 121 HLIYLLECNRDDVHVAFKFASEVAFLPAFKHWEVGDAAPHL-YKELAVFRQNHE 173
>gi|402907900|ref|XP_003916699.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Papio anubis]
Length = 453
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 75/118 (63%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P++RI + KAG+RYE +NLG TH+LR A+ L+T+ + F I ++
Sbjct: 45 NGLVIASLENYAPLSRIGLFIKAGSRYEDSNNLGTTHLLRLASSLTTKGASSFRITHGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R ++ + +FL +V EFR WEV+DL P+LK D+
Sbjct: 105 AVGGKLSVTATRETMAYTVECLRGDVDILMEFLLNVTTAPEFRRWEVADLQPQLKIDK 162
>gi|387914410|gb|AFK10814.1| ubiquinol-cytochrome c reductase core protein II [Callorhinchus
milii]
Length = 458
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 71/114 (62%)
Query: 157 VVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGG 216
+ S+ SP ++I V KAG+RYE NLGITH LR AA ++T+ + I R ++ G
Sbjct: 54 IASLENYSPTSKIGVFIKAGSRYENAGNLGITHALRLAANMTTKGHSSSKITRGIEAVGS 113
Query: 217 SLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
+L T R+ ++YT++ +R + V ++L +V EFRPWE+S L PR+K DR
Sbjct: 114 TLSVTSTRDNMIYTVDCIRDYVDTVMEYLINVTAAQEFRPWELSALPPRIKVDR 167
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 29/163 (17%)
Query: 1 ASAKEALAFAVLKYALGAGP-AKTGKNQRSTNSKGLSR---TPGRESLDESHH------- 49
A EA AF+VL++ L GP K G N S + +++ P S+ +++
Sbjct: 283 AGTAEAHAFSVLQHILAPGPYIKRGSNVSSKLHQAIAKKTSDPFDVSVFNANYSDSGLFG 342
Query: 50 ---FSPPQALQ-------ASIDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVV 99
S P ++ A I ++ + +ADIA+ K LK + ET D +D +
Sbjct: 343 IYIISQPGSVNDVIGTALAQIGIIAKGNVTEADIAQAKKQLKAKALMAVETSDGLLDEIG 402
Query: 100 RQAVTTGVVKSLPDLLAEVEAVSSSD--------VSAKRSFAA 134
Q + +G +L E+++VS +D VS K+S AA
Sbjct: 403 SQVLASGTYIPTSRVLQEIDSVSLNDVENAAKKFVSGKKSMAA 445
>gi|62859937|ref|NP_001016666.1| ubiquinol-cytochrome c reductase core protein II [Xenopus
(Silurana) tropicalis]
gi|89268656|emb|CAJ83047.1| ubiquinol-cytochrome c reductase core protein II [Xenopus
(Silurana) tropicalis]
Length = 451
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 73/118 (61%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ SP ++I V +AG+RYE NLG+ HVLR A+ L+T+ + F I R ++
Sbjct: 43 NGLVIASLENYSPSSKIGVFIRAGSRYENASNLGVNHVLRLASSLTTKGASAFKITRGIE 102
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE IVY++E +R + V ++L +V EFR WEVSDL ++K D+
Sbjct: 103 AVGGGLSVTSTRENIVYSVECLRDYVDTVMEYLINVTTAPEFRRWEVSDLQAKVKLDK 160
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 22/155 (14%)
Query: 2 SAKEALAFAVLKYALGAGP-AKTGKNQRSTNSKGLSRTPGR----ESLDESHH------- 49
S+ EA AF+VL++ LGAGP K G N S S+ +++ + + + S+
Sbjct: 277 SSHEANAFSVLQHILGAGPFIKRGSNASSKLSQAVNKATNQPFDVSAFNASYSDSGLFGV 336
Query: 50 FSPPQALQAS---------IDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVR 100
++ QA AS + V + +AD+ + K LK + E+ + +
Sbjct: 337 YTVSQAAAASEVINAALNQVKAVAQGNVTEADVTKAKNQLKSQYLMTLESSCGLLGEIGS 396
Query: 101 QAVTTGVVKSLPDLLAEVEAVSSSD-VSAKRSFAA 134
QA+ +G + + + ++++V+S+D VSA + FA+
Sbjct: 397 QALASGTYVTPTETIQQIDSVTSADVVSAAKKFAS 431
>gi|3660377|pdb|3BCC|B Chain B, Stigmatellin And Antimycin Bound Cytochrome Bc1 Complex
From Chicken
gi|5822458|pdb|2BCC|B Chain B, Stigmatellin-Bound Cytochrome Bc1 Complex From Chicken
Length = 422
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 73/118 (61%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ SP + I V KAG+RYE NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 14 NGLVIASLENYSPGSTIGVFIKAGSRYENSSNLGTSHLLRLASSLTTKGASSFKITRGIE 73
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L RE + YT+E +R ++ + +FL +V EFRPWEV+DL P+LK D+
Sbjct: 74 AVGGKLSVESTRENMAYTVECLRDDVEILMEFLLNVTTAPEFRPWEVADLQPQLKIDK 131
>gi|157838260|pdb|1BCC|B Chain B, Cytochrome Bc1 Complex From Chicken
Length = 422
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 73/118 (61%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ SP + I V KAG+RYE NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 14 NGLVIASLENYSPGSTIGVFIKAGSRYENSSNLGTSHLLRLASSLTTKGASSFKITRGIE 73
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L RE + YT+E +R ++ + +FL +V EFRPWEV+DL P+LK D+
Sbjct: 74 AVGGKLSVESTRENMAYTVECLRDDVEILMEFLLNVTTAPEFRPWEVADLQPQLKIDK 131
>gi|332224674|ref|XP_003261494.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial
[Nomascus leucogenys]
Length = 453
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 74/118 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +PI+RI + KAG+RYE +NLG TH+LR + L+T+ + F I R ++
Sbjct: 45 NGLVIASLENYAPISRIGLFIKAGSRYEDSNNLGTTHLLRLTSSLTTKGASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R ++ + +FL +V EFR WEV+D P+LK D+
Sbjct: 105 AVGGKLSVTATRENMAYTVECLRGDVDILMEFLLNVTTAPEFRRWEVADRQPQLKIDK 162
>gi|90076302|dbj|BAE87831.1| unnamed protein product [Macaca fascicularis]
Length = 453
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 74/118 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P++RI + KAG+RYE +NLG TH+LR A+ L+T+ + F I ++
Sbjct: 45 NGLVIASLENYAPLSRIGLFIKAGSRYEDSNNLGTTHLLRLASSLTTKRASSFKITHGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E R ++ + +FL +V EFR WEV+DL P+LK D+
Sbjct: 105 AVGGKLSVTATRETMAYTVECQRGDVDILMEFLLNVTTAPEFRRWEVADLQPQLKIDK 162
>gi|355710032|gb|EHH31496.1| Ubiquinol-cytochrome-c reductase complex core protein 2 [Macaca
mulatta]
Length = 453
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 74/118 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P++RI + KAG+RYE +NLG TH+LR A+ L+T+ + F I ++
Sbjct: 45 NGLVIASLENYAPLSRIGLFIKAGSRYEDSNNLGTTHLLRLASSLTTKGASSFKITHGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E R ++ + +FL +V EFR WEV+DL P+LK D+
Sbjct: 105 AVGGKLSVTATRETMAYTVECQRGDVDILMEFLLNVTTAPEFRRWEVADLQPQLKIDK 162
>gi|386780971|ref|NP_001248062.1| cytochrome b-c1 complex subunit 2, mitochondrial [Macaca mulatta]
gi|67969751|dbj|BAE01224.1| unnamed protein product [Macaca fascicularis]
gi|67971034|dbj|BAE01859.1| unnamed protein product [Macaca fascicularis]
gi|384949236|gb|AFI38223.1| cytochrome b-c1 complex subunit 2, mitochondrial precursor [Macaca
mulatta]
Length = 453
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 74/118 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P++RI + KAG+RYE +NLG TH+LR A+ L+T+ + F I ++
Sbjct: 45 NGLVIASLENYAPLSRIGLFIKAGSRYEDSNNLGTTHLLRLASSLTTKGASSFKITHGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E R ++ + +FL +V EFR WEV+DL P+LK D+
Sbjct: 105 AVGGKLSVTATRETMAYTVECQRGDVDILMEFLLNVTTAPEFRRWEVADLQPQLKIDK 162
>gi|383421305|gb|AFH33866.1| cytochrome b-c1 complex subunit 2, mitochondrial precursor [Macaca
mulatta]
Length = 453
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 74/118 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P++RI + KAG+RYE +NLG TH+LR A+ L+T+ + F I ++
Sbjct: 45 NGLVIASLENYAPLSRIGLFIKAGSRYEDSNNLGTTHLLRLASSLTTKGASSFKITHGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E R ++ + +FL +V EFR WEV+DL P+LK D+
Sbjct: 105 AVGGKLSVTATRETMAYTVECQRGDVDILMEFLLNVTTAPEFRRWEVADLQPQLKIDK 162
>gi|380791449|gb|AFE67600.1| cytochrome b-c1 complex subunit 2, mitochondrial precursor, partial
[Macaca mulatta]
Length = 421
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 74/118 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P++RI + KAG+RYE +NLG TH+LR A+ L+T+ + F I ++
Sbjct: 45 NGLVIASLENYAPLSRIGLFIKAGSRYEDSNNLGTTHLLRLASSLTTKGASSFKITHGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E R ++ + +FL +V EFR WEV+DL P+LK D+
Sbjct: 105 AVGGKLSVTATRETMAYTVECQRGDVDILMEFLLNVTTAPEFRRWEVADLQPQLKIDK 162
>gi|147904469|ref|NP_001080401.1| Ubiquinol-cytochrome C reductase complex [Xenopus laevis]
gi|27781306|gb|AAH42931.1| Uqcrc2-prov protein [Xenopus laevis]
Length = 451
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 71/114 (62%)
Query: 157 VVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGG 216
+ S+ SP ++I V +AG+RYE NLG+ HVLR A+ L+T+ + F I R ++ GG
Sbjct: 47 IASIENYSPSSKIGVFVRAGSRYENAGNLGVNHVLRLASSLTTKGASSFKITRGIEAVGG 106
Query: 217 SLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
L T RE IVY++E +R + V ++L +V EFR WEVSDL ++K D+
Sbjct: 107 GLSVTSTRENIVYSVECLRDYVDTVMEYLINVTTAPEFRRWEVSDLQSKVKLDK 160
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 3 AKEALAFAVLKYALGAGP-AKTGKNQRSTNSKGLSRTPGR----ESLDESHH-------F 50
++EA AF+VL++ LGAGP K G N S S+ +++ + + + S+ +
Sbjct: 278 SREANAFSVLQHILGAGPFIKRGNNTSSKLSQAVNKATNQPFDVSAFNASYSDSGLFGVY 337
Query: 51 SPPQALQAS---------IDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQ 101
+ QA AS + V + +AD+ R K LK E+ + + Q
Sbjct: 338 TVSQAAAASEVINAALNQVKAVAQGNVTEADVTRAKNQLKSQYLMPLESSCGLIGDIGSQ 397
Query: 102 AVTTGVVKSLPDLLAEVEAVSSSD-VSAKRSFAA 134
A+ +G + + + ++++V+S+D VSA + FA+
Sbjct: 398 ALASGTYTTPTETIQQIDSVTSADVVSAAKKFAS 431
>gi|355756621|gb|EHH60229.1| Ubiquinol-cytochrome-c reductase complex core protein 2 [Macaca
fascicularis]
Length = 453
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 74/118 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P++RI + KAG+RYE +NLG TH+LR A+ L+T+ + F I ++
Sbjct: 45 NGLVIASLENYAPLSRILLFIKAGSRYEDSNNLGTTHLLRLASSLTTKGASSFKITHGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E R ++ + +FL +V EFR WEV+DL P+LK D+
Sbjct: 105 AVGGKLSVTATRETMAYTVECQRGDVDILMEFLLNVTTAPEFRRWEVADLQPQLKIDK 162
>gi|391336798|ref|XP_003742765.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Metaseiulus occidentalis]
Length = 457
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 82/140 (58%), Gaps = 2/140 (1%)
Query: 130 RSFAAQPAT--KALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGI 187
R+++AQ A K L S + + T N + + SV SP++R+ + KAG+RYET LG
Sbjct: 17 RAYSAQVAVSQKRLPSEETRLTTLDNGLSLYSVENQSPVSRVVIVTKAGSRYETGPELGA 76
Query: 188 THVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLAS 247
+H++R AGL T+ T FGI R+V+ GG++ A R+ ++YT+E R + FL
Sbjct: 77 SHLVRCMAGLRTKNSTSFGITRNVEWVGGNISAAATRDHLIYTLECNRDYVASTINFLND 136
Query: 248 VVGKTEFRPWEVSDLTPRLK 267
VV F+ W++ D+ P+L
Sbjct: 137 VVFAPTFKHWQIDDIMPKLN 156
>gi|148222361|ref|NP_001086687.1| ubiquinol-cytochrome c reductase core protein II [Xenopus laevis]
gi|50418237|gb|AAH77311.1| Uqcrc2 protein [Xenopus laevis]
gi|77748481|gb|AAI06253.1| Uqcrc2 protein [Xenopus laevis]
Length = 451
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 74/118 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ SP ++I V +AG+RYE NLG+ HVLR A+ L+T+ + F I R ++
Sbjct: 43 NGLVIASLENYSPSSKIGVFVRAGSRYENAGNLGVNHVLRLASSLTTKGASAFKITRGIE 102
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE IVY++E +R + V ++L +V EFR WEVSD+ ++K+D+
Sbjct: 103 AVGGGLSVTSTRENIVYSVECLRDYVDTVMEYLINVTTAPEFRRWEVSDVQSKVKHDK 160
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 5 EALAFAVLKYALGAGP-AKTGKNQRSTNSKGLSRTPGR----ESLDESHH-------FSP 52
EA AF L++ LGAGP K G N S + +++ + + + S+ ++
Sbjct: 280 EANAFGALQHILGAGPFIKRGSNTSSKLFQAVNKATNQPFDVSAFNASYSDSGLFGIYTV 339
Query: 53 PQALQAS---------IDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAV 103
QA AS + V + +AD+ R K LK + E+ + + QA+
Sbjct: 340 SQAAAASEVINAALNQVKAVAQGNVTEADVTRAKNQLKSQYLMTLESSCGLIGEIGSQAL 399
Query: 104 TTGVVKSLPDLLAEVEAVSSSD-VSAKRSFAA 134
+G + + + ++++V+S+D VSA + FA+
Sbjct: 400 ASGTYITPTETIQQIDSVTSADVVSAAKKFAS 431
>gi|48762665|ref|NP_001001589.1| cytochrome b-c1 complex subunit 2, mitochondrial [Danio rerio]
gi|47940435|gb|AAH71551.1| Ubiquinol-cytochrome c reductase core protein II [Danio rerio]
Length = 454
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 90/153 (58%), Gaps = 10/153 (6%)
Query: 128 AKRSFAAQPATKALFSP----------DIQSGTSYNKVKVVSVNETSPIARISVAFKAGA 177
++R +AAQ A K F+ ++Q + + + S+ SP +RI V +AG+
Sbjct: 11 SRRLYAAQAARKVDFAAAGEPLKFVPQEVQVTKLPSGLVIASLENYSPASRIGVLVRAGS 70
Query: 178 RYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKE 237
RYET DNLG+TH+LR AA L+T+ + F I R V+ GGSL + RE + YT++ +R
Sbjct: 71 RYETTDNLGVTHLLRLAASLTTKGASAFRICRGVEAVGGSLSVSSSRETMSYTVDCLRDH 130
Query: 238 IGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
I V ++L +V EFR WEVSDLT R+ D+
Sbjct: 131 IDTVMEYLINVTTAPEFRAWEVSDLTGRVNLDK 163
>gi|156914897|gb|AAI52593.1| Ubiquinol-cytochrome c reductase core protein II [Danio rerio]
Length = 454
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 90/153 (58%), Gaps = 10/153 (6%)
Query: 128 AKRSFAAQPATKALFSP----------DIQSGTSYNKVKVVSVNETSPIARISVAFKAGA 177
++R +AAQ A K F+ ++Q + + + S+ SP +RI V +AG+
Sbjct: 11 SRRLYAAQAARKVDFAAAGEPLKFVPQEVQVTKLPSGLVIASLENYSPASRIGVLVRAGS 70
Query: 178 RYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKE 237
RYET DNLG+TH+LR AA L+T+ + F I R V+ GGSL + RE + YT++ +R
Sbjct: 71 RYETTDNLGVTHLLRLAASLTTKGASAFRICRGVEAVGGSLSVSSSRETMSYTVDCLRDH 130
Query: 238 IGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
I V ++L +V EFR WEVSDLT R+ D+
Sbjct: 131 IDTVMEYLINVTTAPEFRAWEVSDLTGRVNLDK 163
>gi|67678311|gb|AAH97011.1| Ubiquinol-cytochrome c reductase core protein II [Danio rerio]
Length = 454
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 90/153 (58%), Gaps = 10/153 (6%)
Query: 128 AKRSFAAQPATKALFSP----------DIQSGTSYNKVKVVSVNETSPIARISVAFKAGA 177
++R +AAQ A K F+ ++Q + + + S+ SP +RI V +AG+
Sbjct: 11 SRRLYAAQAARKVDFAAAGEPLKFVPQEVQVTKLPSGLVIASLENYSPASRIGVLVRAGS 70
Query: 178 RYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKE 237
RYET DNLG+TH+LR AA L+T+ + F I R V+ GGSL + RE + YT++ +R
Sbjct: 71 RYETTDNLGVTHLLRLAASLTTKGASAFRICRGVEAVGGSLSVSSSRETMSYTVDCLRDH 130
Query: 238 IGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
I V ++L +V EFR WEVSDLT R+ D+
Sbjct: 131 IDTVMEYLINVTTAPEFRAWEVSDLTGRVNLDK 163
>gi|344294304|ref|XP_003418858.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Loxodonta africana]
Length = 453
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 75/118 (63%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P +RI + KAG+RYE +NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 45 NGLVIASLENYAPASRIGLFIKAGSRYEDSNNLGTSHLLRLASSLTTKGASAFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE +VYT+E +R ++ + +FL ++ EFR WEV+ L P+L+ D+
Sbjct: 105 AVGGKLSVTTTRENMVYTVECLRDDVDILMEFLLNITTSPEFRRWEVAALQPQLRIDK 162
>gi|156381170|ref|XP_001632139.1| predicted protein [Nematostella vectensis]
gi|156219190|gb|EDO40076.1| predicted protein [Nematostella vectensis]
Length = 696
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 73/124 (58%)
Query: 146 IQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHF 205
+Q T N +KV S+ SPI+R+ + F AG+RYET NLGITH+LR+AA LST T F
Sbjct: 52 VQVTTLDNGLKVASLETYSPISRVGLFFDAGSRYETDSNLGITHMLRNAAYLSTPNRTAF 111
Query: 206 GIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPR 265
I R +Q G SL AT R+ + + + VR +G + LA V + PW++ + R
Sbjct: 112 RIARDAEQHGASLEATCTRDHLFFASDCVRDSVGAIIDSLAEVTLNGAYSPWDLEEAGER 171
Query: 266 LKYD 269
++ D
Sbjct: 172 IRLD 175
>gi|440905088|gb|ELR55518.1| hypothetical protein M91_11850 [Bos grunniens mutus]
Length = 436
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 74/118 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P +RI + KAG+RYE +NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 45 NGLVIASLENYAPASRIGLFIKAGSRYENSNNLGTSHLLRLASSLTTKGASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R ++ + +FL +V EFR WEV+ L P+L+ D+
Sbjct: 105 AVGGKLSVTSTRENMAYTVECLRDDVDILMEFLLNVTTAPEFRRWEVAALQPQLRIDK 162
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 5 EALAFAVLKYALGAGP-AKTGKNQRSTNSKGLSR---TPGRESLDESHHFSPPQALQASI 60
EA AF+VL++ LGAGP K G N S+ + +++ P SL+ + +A +
Sbjct: 282 EANAFSVLQHVLGAGPHVKRGSNATSSLYQAVAKGVHQPFDVSLNTASAGDVIKAAYNQV 341
Query: 61 DVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTTGVVKSLPDLLAEVEA 120
+ + + D+ K LK S E+ + +D V QA+ G +L +++A
Sbjct: 342 KTIAQGNLSNPDVQAAKNKLKAGYLMSVESSEGFLDEVGSQALAAGSYTLPSTVLQQIDA 401
Query: 121 VSSSDV 126
V+ +DV
Sbjct: 402 VADADV 407
>gi|27807143|ref|NP_777055.1| cytochrome b-c1 complex subunit 2, mitochondrial precursor [Bos
taurus]
gi|401248|sp|P23004.2|QCR2_BOVIN RecName: Full=Cytochrome b-c1 complex subunit 2, mitochondrial;
AltName: Full=Complex III subunit 2; AltName: Full=Core
protein II; AltName: Full=Ubiquinol-cytochrome-c
reductase complex core protein 2; Flags: Precursor
gi|55669765|pdb|1SQB|B Chain B, Crystal Structure Analysis Of Bovine Bc1 With Azoxystrobin
gi|82407277|pdb|1SQP|B Chain B, Crystal Structure Analysis Of Bovine Bc1 With Myxothiazol
gi|300|emb|CAA42214.1| ubiquinol--cytochrome c reductase [Bos taurus]
gi|59858351|gb|AAX09010.1| ubiquinol-cytochrome c reductase core protein II [Bos taurus]
gi|73586962|gb|AAI02338.1| Ubiquinol-cytochrome c reductase core protein II [Bos taurus]
gi|296473387|tpg|DAA15502.1| TPA: cytochrome b-c1 complex subunit 2, mitochondrial precursor
[Bos taurus]
Length = 453
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 74/118 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P +RI + KAG+RYE +NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 45 NGLVIASLENYAPASRIGLFIKAGSRYENSNNLGTSHLLRLASSLTTKGASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R ++ + +FL +V EFR WEV+ L P+L+ D+
Sbjct: 105 AVGGKLSVTSTRENMAYTVECLRDDVDILMEFLLNVTTAPEFRRWEVAALQPQLRIDK 162
>gi|4139393|pdb|1BGY|B Chain B, Cytochrome Bc1 Complex From Bovine
gi|4139404|pdb|1BGY|N Chain N, Cytochrome Bc1 Complex From Bovine
gi|4389307|pdb|1BE3|B Chain B, Cytochrome Bc1 Complex From Bovine
gi|30749376|pdb|1L0L|B Chain B, Structure Of Bovine Mitochondrial Cytochrome Bc1 Complex
With A Bound Fungicide Famoxadone
gi|30749387|pdb|1L0N|B Chain B, Native Structure Of Bovine Mitochondrial Cytochrome Bc1
Complex
gi|37926966|pdb|1NTK|B Chain B, Crystal Structure Of Mitochondrial Cytochrome Bc1 In
Complex With Antimycin A1
gi|37926979|pdb|1NTM|B Chain B, Crystal Structure Of Mitochondrial Cytochrome Bc1 Complex
At 2.4 Angstrom
gi|37926998|pdb|1NTZ|B Chain B, Crystal Structure Of Mitochondrial Cytochrome Bc1 Complex
Bound With Ubiquinone
gi|37927019|pdb|1NU1|B Chain B, Crystal Structure Of Mitochondrial Cytochrome Bc1
Complexed With 2- Nonyl-4-Hydroxyquinoline N-Oxide
(Nqno)
gi|51247153|pdb|1PP9|B Chain B, Bovine Cytochrome Bc1 Complex With Stigmatellin Bound
gi|51247163|pdb|1PP9|O Chain O, Bovine Cytochrome Bc1 Complex With Stigmatellin Bound
gi|51247173|pdb|1PPJ|B Chain B, Bovine Cytochrome Bc1 Complex With Stigmatellin And
Antimycin
gi|51247183|pdb|1PPJ|O Chain O, Bovine Cytochrome Bc1 Complex With Stigmatellin And
Antimycin
gi|71042576|pdb|2A06|B Chain B, Bovine Cytochrome Bc1 Complex With Stigmatellin Bound
gi|71042586|pdb|2A06|O Chain O, Bovine Cytochrome Bc1 Complex With Stigmatellin Bound
gi|75765180|pdb|1SQV|B Chain B, Crystal Structure Analysis Of Bovine Bc1 With Uhdbt
gi|75765191|pdb|1SQX|B Chain B, Crystal Structure Analysis Of Bovine Bc1 With Stigmatellin
A
gi|82407288|pdb|1SQQ|B Chain B, Crystal Structure Analysis Of Bovine Bc1 With Methoxy
Acrylate Stilbene (Moas)
gi|114793902|pdb|2FYU|B Chain B, Crystal Structure Of Bovine Heart Mitochondrial Bc1 With
Jg144 Inhibitor
gi|353251554|pdb|2YBB|B Chain B, Fitted Model For Bovine Mitochondrial Supercomplex
I1iii2iv1 By Single Particle Cryo-Em (Emd-1876)
gi|353251579|pdb|2YBB|BB Chain b, Fitted Model For Bovine Mitochondrial Supercomplex
I1iii2iv1 By Single Particle Cryo-Em (Emd-1876)
Length = 439
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 74/118 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P +RI + KAG+RYE +NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 31 NGLVIASLENYAPASRIGLFIKAGSRYENSNNLGTSHLLRLASSLTTKGASSFKITRGIE 90
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R ++ + +FL +V EFR WEV+ L P+L+ D+
Sbjct: 91 AVGGKLSVTSTRENMAYTVECLRDDVDILMEFLLNVTTAPEFRRWEVAALQPQLRIDK 148
>gi|440904156|gb|ELR54704.1| Cytochrome b-c1 complex subunit 2, mitochondrial [Bos grunniens
mutus]
Length = 463
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 74/118 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P +RI + KAG+RYE +NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 45 NGLVIASLENYAPASRIGLFIKAGSRYENSNNLGTSHLLRLASSLTTKGASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R ++ + +FL +V EFR WEV+ L P+L+ D+
Sbjct: 105 AVGGKLSVTSTRENMAYTVECLRDDVDILMEFLLNVTTAPEFRRWEVAALQPQLRIDK 162
>gi|12841359|dbj|BAB25176.1| unnamed protein product [Mus musculus]
Length = 441
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 74/118 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P++RI + KAG+RYE +NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 33 NGLVIASLENYAPLSRIGLFVKAGSRYEDSNNLGTSHLLRLASSLTTKGASSFKITRGIE 92
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R +I + +FL +V EFR WEV+ L +LK D+
Sbjct: 93 AVGGKLSVTATRENMAYTVEGIRSDIEILMEFLLNVTTAPEFRRWEVAALRSQLKIDK 150
>gi|22267442|ref|NP_080175.1| cytochrome b-c1 complex subunit 2, mitochondrial precursor [Mus
musculus]
gi|14548302|sp|Q9DB77.1|QCR2_MOUSE RecName: Full=Cytochrome b-c1 complex subunit 2, mitochondrial;
AltName: Full=Complex III subunit 2; AltName: Full=Core
protein II; AltName: Full=Ubiquinol-cytochrome-c
reductase complex core protein 2; Flags: Precursor
gi|12836876|dbj|BAB23845.1| unnamed protein product [Mus musculus]
gi|13097348|gb|AAH03423.1| Ubiquinol cytochrome c reductase core protein 2 [Mus musculus]
gi|26353032|dbj|BAC40146.1| unnamed protein product [Mus musculus]
gi|148685267|gb|EDL17214.1| ubiquinol cytochrome c reductase core protein 2, isoform CRA_d [Mus
musculus]
Length = 453
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 74/118 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P++RI + KAG+RYE +NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 45 NGLVIASLENYAPLSRIGLFVKAGSRYEDSNNLGTSHLLRLASSLTTKGASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R +I + +FL +V EFR WEV+ L +LK D+
Sbjct: 105 AVGGKLSVTATRENMAYTVEGIRSDIEILMEFLLNVTTAPEFRRWEVAALRSQLKIDK 162
>gi|3891849|pdb|1QCR|B Chain B, Crystal Structure Of Bovine Mitochondrial Cytochrome Bc1
Complex, Alpha Carbon Atoms Only
Length = 423
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 74/118 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P +RI + KAG+RYE +NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 15 NGLVIASLENYAPASRIGLFIKAGSRYENSNNLGTSHLLRLASSLTTKGASSFKITRGIE 74
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R ++ + +FL +V EFR WEV+ L P+L+ D+
Sbjct: 75 AVGGKLSVTSTRENMAYTVECLRDDVDILMEFLLNVTTAPEFRRWEVAALQPQLRIDK 132
>gi|410985024|ref|XP_003998825.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Felis catus]
Length = 453
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 80/137 (58%)
Query: 134 AQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRS 193
A PA D++ N + + S+ +P +RI + KAG+RYE +NLG +H+LR
Sbjct: 26 AAPAGVPPLPQDLEFTKLPNGLVIASLENYAPASRIGLFIKAGSRYEDSNNLGTSHLLRL 85
Query: 194 AAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTE 253
A+ L+T+ + F I R ++ GG L T RE + YT+E +R ++ + +FL +V E
Sbjct: 86 ASSLTTKGASSFKITRGIEAVGGKLSVTSTRENMAYTVECLRDDVDILMEFLLNVTTAPE 145
Query: 254 FRPWEVSDLTPRLKYDR 270
FR WEV+DL +L+ D+
Sbjct: 146 FRRWEVADLQSQLRIDK 162
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 23/144 (15%)
Query: 5 EALAFAVLKYALGAGP-AKTGKNQRST----NSKGLSRTPGRESLDESHH-------FSP 52
EA AF+VL+Y LGAGP K G N S+ +KG+ + + + S+ ++
Sbjct: 282 EANAFSVLQYVLGAGPHVKRGSNATSSLYQAVAKGVHQPFDVSAFNASYSDSGLFGIYTI 341
Query: 53 PQALQASIDVVRGA----------GIKDADIARGKALLKRHLADSFETLDSTVDSVVRQA 102
QA A DV++ A + + D+ K LK S E+ + +D V QA
Sbjct: 342 SQAAAAG-DVIKAAYNQVKMIAQGNLSNTDVLAAKNKLKAGYLMSVESSEEFLDEVGSQA 400
Query: 103 VTTGVVKSLPDLLAEVEAVSSSDV 126
+ G +L ++++V+ +DV
Sbjct: 401 LVAGSYTPPATVLQQIDSVADTDV 424
>gi|26346450|dbj|BAC36876.1| unnamed protein product [Mus musculus]
Length = 453
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 74/118 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P++RI + KAG+RYE +NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 45 NGLVIASLENYAPLSRIGLFVKAGSRYEDSNNLGTSHLLRLASSLTTKGASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R +I + +FL +V EFR WEV+ L +LK D+
Sbjct: 105 AVGGKLSVTATRENMAYTVEGIRSDIEILMEFLLNVTTAPEFRRWEVAALRSQLKIDK 162
>gi|291390734|ref|XP_002711862.1| PREDICTED: ubiquinol-cytochrome c reductase core protein II
[Oryctolagus cuniculus]
Length = 453
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 85/145 (58%)
Query: 126 VSAKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNL 185
V+ K +A PA L D++ N + + S+ +P +RI + KAG+RYE +NL
Sbjct: 18 VAPKVKASAAPAGAPLHPQDLEFTKLPNGLVIASLENYAPASRIGLFIKAGSRYEDSNNL 77
Query: 186 GITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFL 245
G +H+LR A+ L+T+ + F I R ++ GG+L T RE + YT+E +R ++ + +FL
Sbjct: 78 GTSHLLRLASSLTTKGASSFKITRGIEAVGGTLSVTATREKMAYTVECLRDDVDILMEFL 137
Query: 246 ASVVGKTEFRPWEVSDLTPRLKYDR 270
+V EFR WEV+ L +L+ D+
Sbjct: 138 LNVTTSPEFRRWEVAALQSQLRVDK 162
>gi|242007630|ref|XP_002424636.1| ubiquinol-cytochrome-c reductase complex core protein 2, putative
[Pediculus humanus corporis]
gi|212508102|gb|EEB11898.1| ubiquinol-cytochrome-c reductase complex core protein 2, putative
[Pediculus humanus corporis]
Length = 398
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 67/113 (59%)
Query: 157 VVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGG 216
V S++ P++RI++AF+ G R+ET NLG+THV+RS G ST T F I R++ Q G
Sbjct: 2 VSSMDNCGPLSRITIAFRTGPRHETNKNLGVTHVIRSMVGWSTRTCTGFAIHRNLAQQGV 61
Query: 217 SLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYD 269
L T DRE + + R I K+L +V F+ W++SD PRLKY+
Sbjct: 62 HLTCTGDRETTAFNVVGTRTHINSALKYLNAVACSPAFKHWQISDNLPRLKYE 114
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 4 KEALAFAVLKYALGAGPAKTGKNQRST---NSKGLSRTPGRESLDESHH--------FSP 52
KEALA+AVL+ A G P+ S N G ++ G + ++ S
Sbjct: 231 KEALAYAVLQKAWGTHPSVAWGGSPSPLYKNVVGPAKHVGATCFNINYTDNGLFGIVISG 290
Query: 53 PQA-----LQASIDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTTGV 107
P + L + +++ + + D RGK +LK L S+E D V+ +V Q++ V
Sbjct: 291 PASNIGATLGPAAKLLKSGTVSEEDFKRGKVMLKLELLSSYEKSDYVVEDMVNQSLGGDV 350
Query: 108 VKSLPDLLAEVEAVSSSDVS 127
+ P L ++ ++ +DVS
Sbjct: 351 IIPGPLLAEALDKINYADVS 370
>gi|321462816|gb|EFX73836.1| hypothetical protein DAPPUDRAFT_200339 [Daphnia pulex]
Length = 439
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 142 FSP----DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGL 197
FSP +++ T N + V S+ +P++R+ +AFKAG+R E GI H+LR ++ L
Sbjct: 30 FSPVPREPVKTTTLSNGIVVTSIETNAPLSRVGIAFKAGSRNEPSGKEGIIHLLRMSSSL 89
Query: 198 STEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPW 257
ST++ T F + R + QAG +L T RE ++Y+++A RK+I V LA + F+PW
Sbjct: 90 STKQSTQFSLTRVINQAGAALTCTSGREHVLYSVDASRKQIDGVLPKLADAATQQVFKPW 149
Query: 258 EVSDLTPRLKYD 269
E+SD ++K D
Sbjct: 150 ELSDNLYKIKLD 161
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 19/145 (13%)
Query: 1 ASAKEALAFAVLKYALGAG-PAKTGKNQRSTNSKGLSRTPGRESLDESHH--------FS 51
A K +AFA+L+ ALGAG P K G S ++ + SL+ ++ +
Sbjct: 276 ADTKAMVAFALLQRALGAGIPVKYGSGAGSKLNQAVLGAGAVSSLNLNYSDAGLFGFVAA 335
Query: 52 PP-----QALQASIDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTTG 106
P + + A+ V+R A + ++ ++R KA LK L E V+ + QA+
Sbjct: 336 APASDAGKVVSAATKVLRSASVNESQLSRAKAQLKADLLMVKENTGVLVEELALQALL-- 393
Query: 107 VVKSLPDLLAEVEAVSSSDVSAKRS 131
+ DLL+ V+ VS +DV+A S
Sbjct: 394 ---NRADLLSTVDNVSITDVNAVAS 415
>gi|312383544|gb|EFR28595.1| hypothetical protein AND_03296 [Anopheles darlingi]
Length = 515
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 67/103 (65%)
Query: 174 KAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEA 233
AG+R ET DNLG +HVLR+A GLST+ T FGI R++QQAGGSL DR+ I YT+
Sbjct: 139 NAGSRNETADNLGASHVLRAAGGLSTKTATAFGITRNIQQAGGSLTTAADRQTISYTVAV 198
Query: 234 VRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDRLTRPSQ 276
+ ++ K+L + F+PWE++DLTP ++ + P++
Sbjct: 199 TKDQLEVGLKYLEATATGQVFKPWELADLTPVIRNELARVPAE 241
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 20/143 (13%)
Query: 2 SAKEALAFAVLKYALGAGPAKTGKNQRSTNSKGLSRTPGR-------ESLDESHHFS--- 51
S KEA+AF VL+YA G GPA +R N+ L++ G S ++ F
Sbjct: 349 SLKEAMAFWVLQYAAGVGPAT----KRGANNGALTKALGNVNCSSLYNSYTDNGLFGFIV 404
Query: 52 ------PPQALQASIDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTT 105
+A++A + ++ + DAD+ARGKA +A+ E + + + +AV
Sbjct: 405 SCDAKEAGKAVEAGVKALKSLSVNDADVARGKAAAVGLVAEYTENHSTLLAQLAEEAVLA 464
Query: 106 GVVKSLPDLLAEVEAVSSSDVSA 128
G V DL+A V AV++SDV A
Sbjct: 465 GQVFKKSDLIAAVNAVTASDVQA 487
>gi|351710281|gb|EHB13200.1| Cytochrome b-c1 complex subunit 2, mitochondrial [Heterocephalus
glaber]
Length = 453
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 73/118 (61%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P++ I V KAG+RYE +NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 45 NGLVIASLENYAPVSTIGVFIKAGSRYEDSNNLGTSHLLRLASTLTTKGASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R +I + +FL +V EFR WEV+ L +L+ DR
Sbjct: 105 AVGGKLSVTATRENMAYTVECLRDDIEILMEFLLNVTTAPEFRRWEVAALQSQLRIDR 162
>gi|335284501|ref|XP_003124603.2| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Sus scrofa]
Length = 453
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 84/145 (57%)
Query: 126 VSAKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNL 185
V+ K +A PA L D++ N + + S+ +P +RI + KAG+RYE +NL
Sbjct: 18 VAPKALASAAPAGVPLQPQDLEFTRLPNGLVIASLENYAPASRIGLFIKAGSRYEDSNNL 77
Query: 186 GITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFL 245
G +H+LR A+ L+T+ + F I R ++ GG L T RE + YT+E +R +I + +FL
Sbjct: 78 GTSHLLRLASSLTTKGASSFKITRGIEAVGGKLSVTSTRESMAYTVECLRDDIEILMEFL 137
Query: 246 ASVVGKTEFRPWEVSDLTPRLKYDR 270
+V EFR WEV+ L +L+ D+
Sbjct: 138 LNVTAAPEFRRWEVAALQSQLRIDK 162
>gi|395822669|ref|XP_003784636.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Otolemur garnettii]
Length = 453
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 77/126 (61%)
Query: 145 DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTH 204
D++ N + + S+ +P +RI + KAG+RYE DNLG +H+LR A+ L+T+ +
Sbjct: 37 DLEFTKLLNGLVIASLENYAPASRIGLFIKAGSRYEGSDNLGTSHLLRLASSLTTKGASS 96
Query: 205 FGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTP 264
F I R ++ AGG L T RE I YT+E +R ++ + +FL +V EF W+V+DL
Sbjct: 97 FKITRGIEAAGGKLSVTATRENIAYTVERLRGDVDILMEFLLNVTTAPEFHHWKVADLQS 156
Query: 265 RLKYDR 270
+L+ D+
Sbjct: 157 QLRVDK 162
>gi|164608846|gb|ABY62754.1| ubiquinol-cytochrome c reductase core protein [Artemia franciscana]
Length = 271
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 70/117 (59%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + V +V P++R+++A + G+R ET DN GI+H++R+ G +TE F+ FGI R +
Sbjct: 45 NGIVVATVPSEVPVSRVALALRVGSRDETYDNRGISHMMRTLVGTATENFSAFGITRRLN 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYD 269
Q+G SL RE VY ++ ++ I + LA V + F+PWEV D RLK +
Sbjct: 105 QSGSSLNCIGGRESTVYVLDCLQPNITELLPLLAEVSLRPAFKPWEVDDCLSRLKLE 161
>gi|149758542|ref|XP_001494431.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Equus caballus]
gi|335775038|gb|AEH58438.1| mitochondrial cytochrome b-c1 complex subunit 2-like protein [Equus
caballus]
Length = 453
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 74/118 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P +RI + KAG+RYE +NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 45 NGLVIASLENYAPASRIGLFIKAGSRYEDSNNLGTSHLLRLASSLTTKGASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG+L T RE + YT+E +R +I + +FL +V EFR WEV+ L +L+ D+
Sbjct: 105 AVGGTLSVTSTRENMAYTVECLRDDIDILMEFLLNVTTSPEFRRWEVAALQSQLRIDK 162
>gi|296484266|tpg|DAA26381.1| TPA: cytochrome b-c1 complex subunit 2, mitochondrial-like [Bos
taurus]
Length = 453
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 73/118 (61%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P +RI + KAG+RYE +NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 45 NGLVIASLENYAPASRIGLFIKAGSRYENSNNLGTSHLLRLASSLTTKGASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L RE + YT+E +R ++ + +FL +V EFR WEV+ L P+L+ D+
Sbjct: 105 AVGGKLSMMSTRENMAYTVECLRDDVDILMEFLLNVTTAPEFRRWEVAALQPQLRIDK 162
>gi|354503476|ref|XP_003513807.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial
[Cricetulus griseus]
gi|344245614|gb|EGW01718.1| Cytochrome b-c1 complex subunit 2, mitochondrial [Cricetulus
griseus]
Length = 453
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 79/135 (58%)
Query: 136 PATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAA 195
PA L D++ N + + S+ +P++RI + KAG+RYE +NLG +H+LR A+
Sbjct: 28 PAGVPLQPEDLEFTKLPNGLVIASLENYAPLSRIGLFVKAGSRYEDSNNLGTSHLLRLAS 87
Query: 196 GLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFR 255
L+T+ + F I R ++ GG L RE + YTIE +R +I + +FL +V EFR
Sbjct: 88 SLTTKGASSFKITRGIEAIGGKLSVAATRENMAYTIEGMRNDIEILMEFLLNVTTAPEFR 147
Query: 256 PWEVSDLTPRLKYDR 270
WEV+ L +LK D+
Sbjct: 148 RWEVAALQSQLKIDK 162
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 31/157 (19%)
Query: 8 AFAVLKYALGAGP-AKTGKNQRSTNSKGLSRTPGR----ESLDESHH-------FSPPQA 55
AF+VL++ LGAGP K G N S S+ +++ + + + S+ ++ QA
Sbjct: 285 AFSVLQHLLGAGPHIKRGNNTTSLLSQSVAKGSNQPFDVSAFNASYSDSGLFGIYTISQA 344
Query: 56 LQASIDVVRGA----------GIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTT 105
+A+ DV++ A + AD+ K LK S ET + + + QA+
Sbjct: 345 -EAAGDVIKAAYNQVKAVAQGNLSSADVQAAKNKLKAGYLMSVETSEGFLSEIGSQALLA 403
Query: 106 GVVKSLPDLLAEVEAVSSSD--------VSAKRSFAA 134
G S P L ++++V+ +D VS K+S AA
Sbjct: 404 GSYMSPPTFLQQIDSVADADVIKAAKKFVSGKKSMAA 440
>gi|444721794|gb|ELW62506.1| Cytochrome b-c1 complex subunit 2, mitochondrial [Tupaia chinensis]
Length = 527
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 74/118 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P +RI + KAG+RYE +NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 45 NGLVIASLENYAPASRIGLFIKAGSRYEDSNNLGTSHLLRLASNLTTKGASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG+L T RE + YT+E +R ++ + +FL +V EFR WEV+ L +L+ D+
Sbjct: 105 AVGGNLSVTATRENMAYTVECLRDDVDILMEFLLNVTTAPEFRRWEVAALQSQLRVDK 162
>gi|195374944|ref|XP_002046263.1| GJ12803 [Drosophila virilis]
gi|194153421|gb|EDW68605.1| GJ12803 [Drosophila virilis]
Length = 441
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Query: 128 AKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGI 187
AKR +A P SP I NK+ V + + + P++R+S+ +AG+RYE D LG
Sbjct: 15 AKRGYATCPRLVGDTSP-INVNVLENKLVVATADASVPVSRVSIVLRAGSRYEAYDTLGA 73
Query: 188 THVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLAS 247
+H+LR A LST+ + F I RH+QQ GG+L DRE + YT+E + ++L
Sbjct: 74 SHLLRLAGSLSTQRSSAFAIARHIQQVGGTLTTWGDRELVGYTVETTSDNVETGLRYLQD 133
Query: 248 VVGKTEFRPWEVSD 261
++ + F+PWE+ D
Sbjct: 134 LL-QPAFKPWELKD 146
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 17/142 (11%)
Query: 4 KEALAFAVLKYALGAGPA-KTGKNQR--STNSKGLSRTP-GRESLDESHHFSPPQALQAS 59
KEALAFA+L+ A+G A K GK+ S + S P +++++S+ + AS
Sbjct: 272 KEALAFAILEQAIGGDAATKRGKSAGAFSEAASCASDAPVALKAINKSYLDAGLFGFVAS 331
Query: 60 ID-------------VVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTTG 106
D ++ + D D+ARGKALLK + ++ + + + RQA T
Sbjct: 332 ADSKDIGKTVEFLVRALKSGSVSDKDVARGKALLKSRIISNYSSDSGLIKQIGRQAALTR 391
Query: 107 VVKSLPDLLAEVEAVSSSDVSA 128
V L+A ++ +S V A
Sbjct: 392 TVLEADALVAAIDGISLDQVQA 413
>gi|443705587|gb|ELU02055.1| hypothetical protein CAPTEDRAFT_184508 [Capitella teleta]
Length = 443
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 71/125 (56%)
Query: 145 DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTH 204
DI N + V ++ +P++R++V KAG R E P +GI HV+R+AA +T+ +
Sbjct: 32 DIHVSKQANGMVVAALENQAPVSRLAVYMKAGPRNEQPGEVGICHVMRNAANFTTQGASA 91
Query: 205 FGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTP 264
FG+++++QQ G + RE +VY +E R ++ +L V K + PWE+SD P
Sbjct: 92 FGLVKNMQQMGANFTCATTRESMVYNLECTRDKVEKAVDYLVDVTCKPVYFPWEISDSKP 151
Query: 265 RLKYD 269
+ + D
Sbjct: 152 QFQLD 156
>gi|301781382|ref|XP_002926098.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 453
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 72/118 (61%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P +RI + KAG+RYE +NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 45 NGLVIASLENYAPASRIGLFIKAGSRYEDSNNLGTSHLLRLASSLTTKGASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R + + +FL +V EFR WEV+ L RL+ D+
Sbjct: 105 AVGGKLSVTSTRENMAYTVECLRDHVDILMEFLLNVTTSPEFRRWEVAALHSRLRIDK 162
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 21/143 (14%)
Query: 5 EALAFAVLKYALGAGP-AKTGKNQRST----NSKGLSRTPGRESLDESHH-------FSP 52
EA AF+VL+YALGAGP K G N S+ +KG+ + + + S+ ++
Sbjct: 282 EANAFSVLQYALGAGPYVKRGSNPTSSLYQAVAKGVHQPFDVSAFNASYSDSGLFGIYTI 341
Query: 53 PQALQAS---------IDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAV 103
QA A I + + +AD+ K LK S ET + +D V QA+
Sbjct: 342 SQAAAAGEVIKAAYNQIKTIAQGNLSNADVQAAKNKLKAAYLMSVETSEGFLDEVGSQAL 401
Query: 104 TTGVVKSLPDLLAEVEAVSSSDV 126
G +L ++++++ +DV
Sbjct: 402 GAGSYTPPATVLQQIDSIADADV 424
>gi|296474295|tpg|DAA16410.1| TPA: cytochrome b-c1 complex subunit 2, mitochondrial-like [Bos
taurus]
Length = 453
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 73/118 (61%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P +RI + KAG+RYE +NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 45 NGLVIASLENHAPASRIGLFIKAGSRYENSNNLGTSHLLRLASSLTTKGASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E + ++ + +FL +V EFR WEV+ L P+L+ D+
Sbjct: 105 AVGGKLSVTSTRENMAYTVECLWDDVDILMEFLLNVTTAPEFRRWEVAALQPQLRIDK 162
>gi|195145112|ref|XP_002013540.1| GL23351 [Drosophila persimilis]
gi|194102483|gb|EDW24526.1| GL23351 [Drosophila persimilis]
Length = 441
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 70/109 (64%), Gaps = 1/109 (0%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
NK+ V + + T P++R+SV AG+R+ET D LG +H+LR A GLST+ + F I R++Q
Sbjct: 39 NKLVVATADATVPVSRVSVVLGAGSRHETYDTLGASHLLRLAGGLSTQNSSAFAIARNIQ 98
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
Q GG+L A DRE + YT+E + ++L ++ + F+PWE+ D
Sbjct: 99 QVGGTLTAWNDREFVGYTVETTANNVDTGLRYLKDLL-QPAFKPWEIKD 146
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 18/144 (12%)
Query: 1 ASAKEALAFAVLKYALGAGPA-----KTGKNQRSTNSKGLSRTPGRESLDESHHFSPPQA 55
A+ KEALAFAVL+ A+GAG A G + N G S +L+ ++ S
Sbjct: 268 ANLKEALAFAVLEQAVGAGAATKRGNSAGLFGEAVNCAGGSSPSSVRALNRTYSDSGLFG 327
Query: 56 LQASID----------VVRG---AGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQA 102
S + + RG A + + D+ARGKA+LK + + + + + RQA
Sbjct: 328 FVVSGEAKEIGKTVEFLARGLKSALVSEKDVARGKAMLKARIISKYSSDGGLIKEIGRQA 387
Query: 103 VTTGVVKSLPDLLAEVEAVSSSDV 126
+ V LL+ ++ ++ V
Sbjct: 388 ALSRNVLEADTLLSAIDGITQKQV 411
>gi|195135609|ref|XP_002012225.1| GI16551 [Drosophila mojavensis]
gi|193918489|gb|EDW17356.1| GI16551 [Drosophila mojavensis]
Length = 441
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 82/144 (56%), Gaps = 3/144 (2%)
Query: 128 AKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGI 187
AKR +A P SP I NK+ V + + + P++R+S+ +AG+RYE D G
Sbjct: 15 AKRGYATCPRLVGDTSP-IAVNVLDNKLVVATADASVPVSRVSIVLRAGSRYEAYDTQGA 73
Query: 188 THVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLAS 247
+H+LR A LSTE T F I R++QQ GGSL A DRE + YT+E + ++L
Sbjct: 74 SHLLRLAGTLSTERSTAFAIARNIQQVGGSLTAWGDREFVGYTVETTADNVETGLRYLQD 133
Query: 248 VVGKTEFRPWEVSDLTPRLKYDRL 271
++ + F+PWE+ D L Y++L
Sbjct: 134 LL-QPAFKPWELKDNAKTL-YNQL 155
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 17/142 (11%)
Query: 4 KEALAFAVLKYALGAGPA-KTGKNQ----RSTNSKG---LSRTPGRESLDESHHFS---- 51
EALAFA+L+ A+G G A K GK+ + + G +S +S ++ F
Sbjct: 272 NEALAFAILRQAVGGGAATKRGKSAGAFGEAVSCAGDAPVSYQAINKSYTDAGVFGFVAS 331
Query: 52 -----PPQALQASIDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTTG 106
+A+ + ++ + D D+ARGKA+LK ++ + + RQA T
Sbjct: 332 AGSKDIGKAVDFLVRALKSGSVSDKDVARGKAVLKARALSNYSSDGELSKQIARQAAITR 391
Query: 107 VVKSLPDLLAEVEAVSSSDVSA 128
V L+A ++AVS V A
Sbjct: 392 TVLEADALVAAIDAVSVQQVQA 413
>gi|281344434|gb|EFB20018.1| hypothetical protein PANDA_015716 [Ailuropoda melanoleuca]
Length = 442
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 72/118 (61%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P +RI + KAG+RYE +NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 34 NGLVIASLENYAPASRIGLFIKAGSRYEDSNNLGTSHLLRLASSLTTKGASSFKITRGIE 93
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R + + +FL +V EFR WEV+ L RL+ D+
Sbjct: 94 AVGGKLSVTSTRENMAYTVECLRDHVDILMEFLLNVTTSPEFRRWEVAALHSRLRIDK 151
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 21/143 (14%)
Query: 5 EALAFAVLKYALGAGP-AKTGKNQRST----NSKGLSRTPGRESLDESHH-------FSP 52
EA AF+VL+YALGAGP K G N S+ +KG+ + + + S+ ++
Sbjct: 271 EANAFSVLQYALGAGPYVKRGSNPTSSLYQAVAKGVHQPFDVSAFNASYSDSGLFGIYTI 330
Query: 53 PQALQAS---------IDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAV 103
QA A I + + +AD+ K LK S ET + +D V QA+
Sbjct: 331 SQAAAAGEVIKAAYNQIKTIAQGNLSNADVQAAKNKLKAAYLMSVETSEGFLDEVGSQAL 390
Query: 104 TTGVVKSLPDLLAEVEAVSSSDV 126
G +L ++++++ +DV
Sbjct: 391 GAGSYTPPATVLQQIDSIADADV 413
>gi|432117631|gb|ELK37867.1| Cytochrome b-c1 complex subunit 2, mitochondrial [Myotis davidii]
Length = 601
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 79/135 (58%)
Query: 136 PATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAA 195
PA + D++ N + + S+ +P +RI + KAG+RYE +NLG +H+LR A+
Sbjct: 176 PAGAPVHPQDLEFTKLPNGLVIASLENYAPASRIGLFVKAGSRYEDSNNLGTSHLLRLAS 235
Query: 196 GLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFR 255
L+T+ + F I R ++ GG L T RE + YT+E +R +I + +FL +V EFR
Sbjct: 236 SLTTKGASSFKITRGIEAVGGKLSVTSTRENMAYTVECLRDDIEILMEFLLNVTTAPEFR 295
Query: 256 PWEVSDLTPRLKYDR 270
WEV+ L +L+ D+
Sbjct: 296 RWEVAALQSQLRIDK 310
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 25/160 (15%)
Query: 5 EALAFAVLKYALGAGP-AKTGKNQRST----NSKGLSRTPGRESLDESHH-------FSP 52
EA AF+VL++ LGAGP K G N S+ +KG+ + + + S+ ++
Sbjct: 430 EANAFSVLQHVLGAGPHVKRGSNATSSLYQAVAKGMHQPFDVSAFNASYSDSGLFGIYTI 489
Query: 53 PQALQASIDVVRGA----------GIKDADIARGKALLKRHLADSFETLDSTVDSVVRQA 102
QA A DV++ A + D+ K LK S E+ + +D + QA
Sbjct: 490 SQAAAAG-DVIKAAYNQVKAIAQGNLSSTDVQAAKNKLKAGYLMSVESSEGFLDEIGSQA 548
Query: 103 VTTGVVKSLPDLLAEVEAVSSSDV--SAKRSFAAQPATKA 140
+ G P +L ++++V+ +DV +AK+ + Q + A
Sbjct: 549 LVAGSYVPPPTVLQQIDSVADADVINAAKKFVSGQKSMAA 588
>gi|55741544|ref|NP_001006971.1| cytochrome b-c1 complex subunit 2, mitochondrial precursor [Rattus
norvegicus]
gi|122066611|sp|P32551.2|QCR2_RAT RecName: Full=Cytochrome b-c1 complex subunit 2, mitochondrial;
AltName: Full=Complex III subunit 2; AltName: Full=Core
protein II; AltName: Full=Ubiquinol-cytochrome-c
reductase complex core protein 2; Flags: Precursor
gi|54035472|gb|AAH83610.1| Ubiquinol cytochrome c reductase core protein 2 [Rattus norvegicus]
gi|149068066|gb|EDM17618.1| ubiquinol cytochrome c reductase core protein 2, isoform CRA_c
[Rattus norvegicus]
Length = 452
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 73/118 (61%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P++RI + KAG+RYE + LG +H+LR A+ L+T+ + F I R ++
Sbjct: 44 NGLVIASLENYAPLSRIGLFIKAGSRYENYNYLGTSHLLRLASTLTTKGASSFKITRGIE 103
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R +I + +FL +V EFR WEV+ L +LK D+
Sbjct: 104 AVGGKLSVTATRENMAYTVEGIRDDIEILMEFLLNVTTAPEFRRWEVAALRSQLKIDK 161
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 21/143 (14%)
Query: 5 EALAFAVLKYALGAGP-AKTGKNQRSTNSKGLSR--------TPGRESLDESHHFSPPQA 55
EA AF+VL++ LGAGP K G N S S+ +++ + S +S F
Sbjct: 281 EANAFSVLQHLLGAGPHIKRGNNTTSLLSQSVAKGSQQPFDVSAFNASYSDSGLFGIYTV 340
Query: 56 LQASI--DVVRGA----------GIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAV 103
QA+ DV+ A + AD+ K LK S ET + + + QA+
Sbjct: 341 SQAAAAGDVINAAYNQVKAVAQGNLSSADVQAAKNKLKAGYLMSVETSEGFLSEIGSQAL 400
Query: 104 TTGVVKSLPDLLAEVEAVSSSDV 126
TG P +L +++AV+ +DV
Sbjct: 401 ATGSYMPPPTVLQQIDAVADADV 423
>gi|57087967|ref|XP_536942.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial isoform
1 [Canis lupus familiaris]
Length = 453
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 80/137 (58%)
Query: 134 AQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRS 193
A PA L D++ N + + S+ +P +RI + KAG+RYE ++LG +H+LR
Sbjct: 26 AAPAGVPLHPQDLEFTKLPNGLVIASLENYAPASRIGLFIKAGSRYEDSNHLGTSHLLRL 85
Query: 194 AAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTE 253
A+ L+T+ + F I R ++ GG L T RE + YT+E +R ++ + +FL +V E
Sbjct: 86 ASSLTTKGASSFKITRGIEAVGGKLSVTSTRENMAYTVECLRDDVDILMEFLLNVTTSPE 145
Query: 254 FRPWEVSDLTPRLKYDR 270
FR WEV+ L +L+ D+
Sbjct: 146 FRRWEVAALQSQLRIDK 162
>gi|426254425|ref|XP_004020879.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Ovis aries]
Length = 453
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 73/118 (61%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P +RI + KAG+RYE +NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 45 NGLVIASLENYAPASRIGLFIKAGSRYENFNNLGTSHLLRLASSLTTKGASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R ++ + +FL +V EFR WEV+ L +L+ D+
Sbjct: 105 AVGGKLSVTSTRENMAYTVECLRDDVDILMEFLLNVTTAPEFRRWEVAALQSQLRIDK 162
>gi|427789505|gb|JAA60204.1| Putative cytochrome b-c1 complex subunit 2 mitochondrial
[Rhipicephalus pulchellus]
Length = 461
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 7/160 (4%)
Query: 114 LLAEVEAVSSSDVSAKRSFAAQPATK-------ALFSPDIQSGTSYNKVKVVSVNETSPI 166
+ A++ + + A R FAAQ A K +L +++ T N + V + SP+
Sbjct: 7 MAAKIARIPCLKLHAVRGFAAQAAPKVSQSKLESLPRQAVETSTLPNGLTVTAFENYSPV 66
Query: 167 ARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREG 226
R+++ KAGARYE N GITH LR+AA L+T+ + F I ++++ G +L A RE
Sbjct: 67 TRLAIVVKAGARYEDGSNRGITHTLRNAATLATKSHSKFAITKNIEYIGANLTACTTREH 126
Query: 227 IVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRL 266
I+Y +E R + KF+ F+ WEV D P+L
Sbjct: 127 IIYLLECNRDDAHVALKFVQEAAFLPAFKHWEVDDAAPQL 166
>gi|198452373|ref|XP_002137469.1| GA27229 [Drosophila pseudoobscura pseudoobscura]
gi|198131904|gb|EDY68027.1| GA27229 [Drosophila pseudoobscura pseudoobscura]
Length = 441
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
NK+ V + + T P++R+S+ AG+R ET D LG +H+LR A GLST+ + F I R++Q
Sbjct: 39 NKLVVATADATVPVSRVSIVLGAGSRNETYDTLGASHLLRLAGGLSTQNSSAFAIARNIQ 98
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
Q GG+L A DRE + YT+E + ++L ++ + F+PWE+ D
Sbjct: 99 QVGGTLTAWNDREVVGYTVETTANNVDTGLRYLQDLL-QPAFKPWEMMD 146
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Query: 4 KEALAFAVLKYALGAGPA-----KTGKNQRSTNSKGLSRTPGRESLDESHHFSPPQALQA 58
KEALAFAVL+ A+GAG A G + N G S +L+ ++ +
Sbjct: 271 KEALAFAVLEQAVGAGAATKRGNSAGLFGEALNCAGGSSPSSVRALNSTYSDAGLFGFVV 330
Query: 59 SID----------VVRG---AGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTT 105
S D +VRG A + + D+ARGKA+LK + + + + + RQA +
Sbjct: 331 SGDAKEIGKTVEFLVRGLKSALVSEKDVARGKAMLKARIISKYSSDGGLIKEIGRQAALS 390
Query: 106 GVVKSLPDLLAEVEAVSSSDV 126
V LL+ ++ ++ V
Sbjct: 391 RNVLEADTLLSAIDGITQKQV 411
>gi|27462842|gb|AAO15610.1|AF462193_1 cytochrome Bc1 complex chain B-like protein [Sarcoptes scabiei type
hominis]
Length = 131
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Query: 164 SPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVD 223
SP+ R++V +AG+RYE LGI+HV+RSAAGL+TE F+ FGI R ++ GG L T
Sbjct: 4 SPLLRLAVIVRAGSRYEPQSKLGISHVMRSAAGLATERFSSFGITRKIEYHGGKLTVTGT 63
Query: 224 REGIVYTIEAVRKE---IGHVHKFLASVVGKTEFRPWEVSDLTPRLKYD 269
R+ I Y +E V E + + +A + + F+PWEVSD RL+ D
Sbjct: 64 RDSIAYLLE-VHNEPEIVEQSFELMADTITRPAFKPWEVSDNNERLQAD 111
>gi|443693074|gb|ELT94521.1| hypothetical protein CAPTEDRAFT_145315, partial [Capitella teleta]
Length = 124
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 67/113 (59%)
Query: 157 VVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGG 216
V ++ +P++R++V KAG R E P +GI HV+R+AA +T+ + FG+++++QQ G
Sbjct: 3 VAALENQAPVSRLAVYMKAGPRNEQPGEVGICHVMRNAANFTTQGASAFGLVKNMQQMGA 62
Query: 217 SLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYD 269
+ RE +VY +E R ++ +L V K + PWE+SD P+ + D
Sbjct: 63 NFTCATTRESMVYNLECTRDKVEKAVDYLVDVTCKPVYFPWEISDSKPQFQLD 115
>gi|390350737|ref|XP_789891.3| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 473
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 68/115 (59%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQA 214
+ V S+ SP++R++V KAG+RYE DNLG +H LR+ L+T + I R +++
Sbjct: 65 LTVASLENNSPVSRLAVIVKAGSRYEGIDNLGASHCLRAFGHLTTSGASALSITRGLEEV 124
Query: 215 GGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYD 269
GGSL + RE + Y+++ +R + +L +V EFRPWEV D RL +D
Sbjct: 125 GGSLETSTTREHVTYSVQCLRDNLDTGMFYLKNVSTGQEFRPWEVKDNNERLLFD 179
>gi|291237180|ref|XP_002738516.1| PREDICTED: ubiquinol-cytochrome c reductase core protein II-like
[Saccoglossus kowalevskii]
Length = 227
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 80/147 (54%), Gaps = 5/147 (3%)
Query: 128 AKRSFAAQPATKA-----LFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETP 182
++RS A PA K L +++ N + V S+ SPI+++ + AG+RYE+
Sbjct: 17 SQRSLALWPAKKNQENVHLRKENVKVSKLPNGMTVASLENNSPISKVGIVVNAGSRYESA 76
Query: 183 DNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVH 242
DNLG+ H LR+ A L+++ + F I R + GGS T RE +Y+++ +R ++
Sbjct: 77 DNLGVAHYLRACAHLTSQGASSFAITRGIGDIGGSFDVTTTREHAIYSVQTLRGKLDKAV 136
Query: 243 KFLASVVGKTEFRPWEVSDLTPRLKYD 269
++ + FRPWEV + R++++
Sbjct: 137 NYMTHAISSPSFRPWEVEETLSRIQFE 163
>gi|291397522|ref|XP_002715990.1| PREDICTED: ubiquinol-cytochrome c reductase core protein II
[Oryctolagus cuniculus]
Length = 453
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 83/148 (56%)
Query: 123 SSDVSAKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETP 182
S V+ K +A PA L D++S N + + S+ +P +RI + KA +RYE
Sbjct: 15 SLQVAPKVKASAAPAGAPLHPQDLESTKLPNGLVIASLENYAPASRIGLFIKARSRYEDS 74
Query: 183 DNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVH 242
+NLG +H+LR A+ L+T + F I R ++ GG+L T RE + +T+E + + +
Sbjct: 75 NNLGTSHLLRLASSLTTNGASSFKITRGIEAVGGTLSVTATREKMAHTVECLWDNVDILM 134
Query: 243 KFLASVVGKTEFRPWEVSDLTPRLKYDR 270
+FL +V EFR WEV+ L +L+ D+
Sbjct: 135 EFLLNVTTSPEFRRWEVTALQSQLRIDK 162
>gi|395514607|ref|XP_003761506.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Sarcophilus harrisii]
Length = 455
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 69/118 (58%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P +RI + KAG+RYE N G +H+LR A+ L+T+ + F I R +
Sbjct: 45 NGLVIASMENYAPASRIGLYIKAGSRYEDSTNFGASHLLRLASNLTTKGASSFKITRGTE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + Y E +R ++ + +FL +V EFR WEV+DL +LK D+
Sbjct: 105 AVGGKLSVTSTRENMAYAAECLRDDVDILMEFLLNVTTAPEFRRWEVADLQSQLKIDK 162
>gi|195435544|ref|XP_002065740.1| GK20075 [Drosophila willistoni]
gi|194161825|gb|EDW76726.1| GK20075 [Drosophila willistoni]
Length = 441
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 2/134 (1%)
Query: 128 AKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGI 187
AKR +A P S I NK+ V + + T P++R+S+ AG+R E D LG
Sbjct: 15 AKRGYATSPRPVGDASA-INVNVLENKLVVATADATLPVSRVSIVLGAGSRNEAYDALGA 73
Query: 188 THVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLAS 247
+H+LR A GLST+ T F I RH+QQ GG+L DRE + YT+E + ++L
Sbjct: 74 SHLLRLAGGLSTKNSTAFAIARHIQQVGGNLTTWGDREVVGYTVETTADNVETGLRYLQD 133
Query: 248 VVGKTEFRPWEVSD 261
++ + F+PWE+ D
Sbjct: 134 LL-QPAFKPWELKD 146
>gi|126334344|ref|XP_001377206.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial
[Monodelphis domestica]
Length = 455
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 75/130 (57%)
Query: 141 LFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTE 200
L+ ++Q N + + S+ +P +RI + KAG+RYE N G +H+LR A+ L+T+
Sbjct: 34 LYPEELQLTKLPNGLVIASMENYAPASRIGLFIKAGSRYEDATNFGTSHLLRLASNLTTK 93
Query: 201 EFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVS 260
+ F I R + GG L T RE + YT + +R +I + ++L +V EFR WEV+
Sbjct: 94 GASSFKITRGTEAVGGKLSVTGTRENMAYTADCLRDDIDILMEYLLNVTTAPEFRRWEVA 153
Query: 261 DLTPRLKYDR 270
DL +LK D+
Sbjct: 154 DLQSQLKIDK 163
>gi|339521899|gb|AEJ84114.1| ubiquinol-cytochrome-c reductase complex core protein 2 [Capra
hircus]
Length = 453
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 72/118 (61%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P +RI + KAG+RYE +NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 45 NGLVIASLENYAPASRIGLFIKAGSRYENFNNLGTSHLLRLASSLTTKVASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E + ++ + +FL +V EFR WEV+ L +L+ D+
Sbjct: 105 AVGGKLSVTSTRENMAYTVECLWDDVDILMEFLLNVTTAPEFRRWEVAALQSQLRIDK 162
>gi|431908532|gb|ELK12127.1| Cytochrome b-c1 complex subunit 2, mitochondrial [Pteropus alecto]
Length = 458
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 70/114 (61%)
Query: 157 VVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGG 216
+ S+ +P ARI + KAG+RYE +NLG +H+LR A+ LST+ + F I R ++ GG
Sbjct: 54 IASLENYAPTARIGLFIKAGSRYEDSNNLGTSHLLRLASSLSTKGASSFKITRGIEAVGG 113
Query: 217 SLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
L T R+ + YT E +R +I + +FL +V EFR WEV+ L +L+ D+
Sbjct: 114 KLSVTSTRDNMAYTGEGLRDDIEILMEFLLNVATAPEFRRWEVAALQSQLRIDK 167
>gi|417410738|gb|JAA51835.1| Putative ubiquinol cytochrome c reductase subunit qcr2, partial
[Desmodus rotundus]
Length = 442
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 72/118 (61%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P +RI + KAG+R E +NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 34 NGLVIASLENHAPASRIGLFIKAGSRCEDFNNLGTSHLLRLASSLTTKGASSFKITRGIE 93
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG L T RE + YT+E +R +I + +FL +V EFR WEV+ L +L+ D+
Sbjct: 94 AVGGKLSVTSTRENMAYTVECLRDDIDILMEFLLNVTTAPEFRRWEVAALQSQLRIDK 151
>gi|198462879|ref|XP_002135397.1| GA18004 [Drosophila pseudoobscura pseudoobscura]
gi|198151021|gb|EDY74024.1| GA18004 [Drosophila pseudoobscura pseudoobscura]
Length = 441
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 128 AKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGI 187
AKR +A P S + NK+ V + + T P++R+S+ AG+R E D LG
Sbjct: 15 AKRGYATCPRPVGDISA-VSVNVLENKLVVATADATVPVSRVSIVLGAGSRNEAYDTLGA 73
Query: 188 THVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLAS 247
+H+LR A GLST+ + F I R++QQ GG+L DRE + YT+E + ++L
Sbjct: 74 SHLLRLAGGLSTQNSSAFAIARNIQQVGGTLTTWGDREVVGYTVETTADNVETGLRYLQD 133
Query: 248 VVGKTEFRPWEVSDLTPRL--KYDRLTR 273
++ + F+PWE+ D L + D +TR
Sbjct: 134 LL-QPAFKPWELKDNAKTLHNQLDAVTR 160
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Query: 1 ASAKEALAFAVLKYALGAGPA-----KTGKNQRSTNSKGLSRTPGRESLDESHHFSPPQA 55
A+ KEALAFAVL+ A+GAG A +G + NS G SR +L+ S+ +
Sbjct: 268 ANPKEALAFAVLEQAVGAGAATKRGNSSGLFGEAANSAGGSRPSSVRALNTSYSDAGLFG 327
Query: 56 LQASID----------VVRG---AGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQA 102
S + +VRG + + D+ARGKALLK + + + + + RQA
Sbjct: 328 FVVSSEAKDIGKTVEFLVRGLKSGSVSEKDVARGKALLKARIISKYSSDGGLIKEIGRQA 387
Query: 103 VTTGVVKSLPDLLAEVEAVSSSDV 126
+ V L+A ++ ++ V
Sbjct: 388 ALSRNVLEADTLIAAIDGITQQQV 411
>gi|195168127|ref|XP_002024883.1| GL17869 [Drosophila persimilis]
gi|194108313|gb|EDW30356.1| GL17869 [Drosophila persimilis]
Length = 441
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 128 AKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGI 187
AKR +A P S + NK+ V + + T P++R+S+ AG+R E D LG
Sbjct: 15 AKRGYATCPRPVGDISA-VSVNVLENKLVVATADATVPVSRVSIVLGAGSRNEAYDTLGA 73
Query: 188 THVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLAS 247
+H+LR A GLST+ + F I R++QQ GG+L DRE + YT+E + ++L
Sbjct: 74 SHLLRLAGGLSTQNSSAFAIARNIQQVGGTLTTWGDREVVGYTVETTADNVETGLRYLQD 133
Query: 248 VVGKTEFRPWEVSDLTPRL--KYDRLTR 273
++ + F+PWE+ D L + D +TR
Sbjct: 134 LL-QPAFKPWELKDNAKTLHNQLDGVTR 160
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Query: 1 ASAKEALAFAVLKYALGAGPA-----KTGKNQRSTNSKGLSRTPGRESLDESHHFSPPQA 55
A+ KEALAFAVL+ A+GAG A +G + NS G SR +L+ S+ +
Sbjct: 268 ANPKEALAFAVLEQAVGAGAATKRGNSSGLFGEAANSAGGSRPSSVRALNTSYSDAGLFG 327
Query: 56 LQASID----------VVRG---AGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQA 102
S + +VRG + + D+ARGKALLK + + + + + RQA
Sbjct: 328 FVVSSEAKDIGKTVEFLVRGLKSGSVSEKDVARGKALLKARIISKYSSDGGLIKEIGRQA 387
Query: 103 VTTGVVKSLPDLLAEVEAVSSSDV 126
+ V L+A ++ ++ V
Sbjct: 388 ALSRNVLEADTLIAAIDGITQQQV 411
>gi|297494004|gb|ADI40724.1| ubiquinol-cytochrome c reductase core protein II [Cynopterus
sphinx]
Length = 364
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 66/104 (63%)
Query: 167 ARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREG 226
ARI + KAG+RYE +NLG +H+LR A+ LST+ + F I R ++ GG+L T RE
Sbjct: 1 ARIGLFIKAGSRYEDFNNLGTSHLLRLASSLSTKGASSFKITRGIEAVGGNLSVTSTREN 60
Query: 227 IVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
+ YT E +R +I + +FL +V EFR WEV+ L +L+ D+
Sbjct: 61 MAYTGECLRDDIEIIMEFLLNVATAPEFRRWEVAALQSQLRIDK 104
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 23/144 (15%)
Query: 1 ASAKEALAFAVLKYALGAGP-AKTGKNQRS----TNSKGLSRTPGRESLDESHH------ 49
A + EA AF+VL+Y LGAGP K G N S +KG+ + + + S+
Sbjct: 220 AGSAEANAFSVLQYVLGAGPHVKRGSNATSPLYQAVAKGIHQPFDVSAFNASYSDSGLFG 279
Query: 50 -FSPPQALQASIDVVRGA----------GIKDADIARGKALLKRHLADSFETLDSTVDSV 98
++ QA A+ DV++ A + AD+ K LK S E+ D +D +
Sbjct: 280 IYTISQASSAA-DVIKAAYSQVKTIAQGNLPSADVQAAKNKLKAGYLMSVESSDGFLDEI 338
Query: 99 VRQAVTTGVVKSLPDLLAEVEAVS 122
QA+ G +L ++++V+
Sbjct: 339 GSQALVAGSYMPPSAVLQQIDSVA 362
>gi|290462907|gb|ADD24501.1| Cytochrome b-c1 complex subunit 2, mitochondrial [Lepeophtheirus
salmonis]
Length = 428
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + V+SV E + + + ++ G+RYE +NLG +H LRS GLST ++FGI R +Q
Sbjct: 25 NGLSVLSVPECTGVGYLRMSVLGGSRYERYENLGSSHALRSGGGLSTHSHSYFGITRGIQ 84
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTP-RLKYD 269
Q+G + + RE + Y++ + RK I + V F+ WEVSD+ P R+K D
Sbjct: 85 QSGANFDISQGREIMSYSLTSSRKTIPSLSDMFIESVTNPAFKNWEVSDVCPGRIKND 142
>gi|297494006|gb|ADI40725.1| ubiquinol-cytochrome c reductase core protein II [Rousettus
leschenaultii]
Length = 361
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 64/104 (61%)
Query: 167 ARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREG 226
ARI + KAG+RYE +NLG +H+LR A+ LST+ + F I R ++ GG L T R+
Sbjct: 2 ARIGLFIKAGSRYEDSNNLGTSHLLRLASSLSTKGASSFKITRGIEAVGGKLSVTSTRDN 61
Query: 227 IVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
+ YT E +R + + +FL +V EFR WEV+ L +L+ D+
Sbjct: 62 MAYTGECLRDDTEILMEFLLNVATAPEFRRWEVAALQSQLRIDK 105
>gi|194872588|ref|XP_001973042.1| GG13564 [Drosophila erecta]
gi|190654825|gb|EDV52068.1| GG13564 [Drosophila erecta]
Length = 440
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
NK+ V + + T P++R+S+ AG+R E D G +H+LR A GLST+ T F I R++Q
Sbjct: 39 NKLVVATADATLPVSRVSLVLGAGSRNEAYDTQGASHLLRLAGGLSTQNSTAFAIARNIQ 98
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
Q GG+L DRE + YT+ ++L ++ + F+PWE+ D
Sbjct: 99 QVGGTLTTWGDREVVGYTVTTTADNAETGLRYLQDLL-QPAFKPWELVD 146
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 19/141 (13%)
Query: 4 KEALAFAVLKYALGAGPA-----KTGKNQRSTNSKGLSRTPGRESLDESHHFSPPQALQA 58
KEALAFA+L+ LGA A G + N G ++++ S+ +
Sbjct: 271 KEALAFAILEQTLGAKAATKRGTSAGLYGEAVNCAG-GVGATVKAVNASYSDAGLFGFVV 329
Query: 59 SID----------VVRG---AGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTT 105
S D +VRG A + + D+ARGKALLK + + + + + RQA T
Sbjct: 330 SADSNDIGKTVEFLVRGLKSASVSEKDVARGKALLKARIVSRYSSDGGLIKEIGRQAALT 389
Query: 106 GVVKSLPDLLAEVEAVSSSDV 126
V LL+ ++ +S S V
Sbjct: 390 RNVLEADALLSAIDGISQSQV 410
>gi|194750675|ref|XP_001957655.1| GF23920 [Drosophila ananassae]
gi|190624937|gb|EDV40461.1| GF23920 [Drosophila ananassae]
Length = 439
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
NK+ V S T P+ R+S+ AG+R E D G +H+LR A GLST+ + F I R++Q
Sbjct: 39 NKLVVASAEATVPVTRVSLVLGAGSRNEAYDTQGASHLLRLAGGLSTQNSSAFAIARNIQ 98
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
Q GG+L DRE + YT+ ++L ++ + F+PWE++D
Sbjct: 99 QVGGTLSTWGDREVVGYTVTTTADNAETGLRYLQDLL-QPAFKPWELTD 146
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 4 KEALAFAVLKYALGAGPAKTGKNQRSTNSKGLSRTPG-------RESLDESHHFS----- 51
KEALAFA+L+ A+GAG A N ++ G S ++ F
Sbjct: 271 KEALAFAILEQAVGAGAATKRGNSAGLFGDAVACAGGSAAVKAINASYSDAGLFGFVVSS 330
Query: 52 ----PPQALQASIDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTTGV 107
+A++ + ++ + D D+ARGKALLK + + + + V RQA T
Sbjct: 331 DSKDVGKAVEFLVRALKSGAVSDKDVARGKALLKARVISQYSSDSGLIKEVGRQAALTRN 390
Query: 108 VKSLPDLLAEVEAVSSSDVSA 128
V LLA ++ +S S+V A
Sbjct: 391 VLEADALLAAIDGISQSEVQA 411
>gi|24665395|ref|NP_648905.1| CG4169, isoform A [Drosophila melanogaster]
gi|442632859|ref|NP_001261955.1| CG4169, isoform B [Drosophila melanogaster]
gi|7294089|gb|AAF49444.1| CG4169, isoform A [Drosophila melanogaster]
gi|19527703|gb|AAL89966.1| AT02348p [Drosophila melanogaster]
gi|220949600|gb|ACL87343.1| CG4169-PA [synthetic construct]
gi|220958408|gb|ACL91747.1| CG4169-PA [synthetic construct]
gi|440215902|gb|AGB94648.1| CG4169, isoform B [Drosophila melanogaster]
Length = 440
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
NK+ V + + T P++R+S+ AG+R E+ D G +H+LR A GLST+ T F I R++Q
Sbjct: 39 NKLVVATADATLPVSRVSLVLGAGSRNESYDIQGASHLLRLAGGLSTQNSTAFAIARNIQ 98
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
Q GG+L DRE + YT+ ++L ++ + F+PWE+ D
Sbjct: 99 QVGGTLTTWGDRELVGYTVTTTADNAETGLRYLQDLL-QPAFKPWELVD 146
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 19/141 (13%)
Query: 4 KEALAFAVLKYALGAGPA-----KTGKNQRSTNSKGLSRTPGRESLDESHHFSPPQALQA 58
KEALAFA+L+ ALGA A G + N G ++++ S+ +
Sbjct: 271 KEALAFAILEQALGAKAATKRGTSAGLFGEAVNCAG-GVGASVKAVNASYSDAGLFGFVV 329
Query: 59 SID----------VVRG---AGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTT 105
S D +VRG A + D D+ARGKALLK + + + + + RQA T
Sbjct: 330 SADSKDIGKTVEFLVRGLKSASVSDKDVARGKALLKARIISRYSSDGGLIKEIGRQAALT 389
Query: 106 GVVKSLPDLLAEVEAVSSSDV 126
V LL ++ +S S V
Sbjct: 390 RNVLEADALLGAIDGISQSQV 410
>gi|195012037|ref|XP_001983443.1| GH15899 [Drosophila grimshawi]
gi|193896925|gb|EDV95791.1| GH15899 [Drosophila grimshawi]
Length = 443
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
Query: 128 AKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGI 187
AKR +A P S I NK+ V + + + P+AR+S+ +AG+R E D G
Sbjct: 15 AKRGYATCPRLVGDTSA-INVNVLENKLVVATADASVPVARVSIVLRAGSRNEAYDTQGA 73
Query: 188 THVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLAS 247
+H+LR A +ST+ + F I R++QQ GG+L DRE + YT+E + +++
Sbjct: 74 SHMLRLAGLMSTQRSSAFAIQRNIQQVGGTLTTWGDREIVGYTVETTADNVETGLRYMQD 133
Query: 248 VVGKTEFRPWEVSD 261
++ + F+PWE+ D
Sbjct: 134 LL-QPAFKPWEIKD 146
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 59/143 (41%), Gaps = 18/143 (12%)
Query: 4 KEALAFAVLKYALGAGPA-----KTGKNQRSTNSKGLSRTPGRESLDESHHFSPPQALQA 58
KEALAFA+L A+GAG A G + N G +L+ S+ + A
Sbjct: 273 KEALAFAILSQAVGAGAATKRGKAAGAFGEAVNCAGGDAPISFRALNRSYSDAGLFGFVA 332
Query: 59 SID-------------VVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTT 105
+ D ++ I D D+ARGKALLK + + + + RQA
Sbjct: 333 AADGKDIGKAVDFLVRALKAGSISDKDVARGKALLKARTIAKYSSDGGLIKVIGRQAALN 392
Query: 106 GVVKSLPDLLAEVEAVSSSDVSA 128
V L+A ++ +S V A
Sbjct: 393 RTVLEADALVAAIDGISLQQVQA 415
>gi|188529343|gb|ACD62417.1| ubiquinol-cytochrome c reductase core protein II-like protein
[Drosophila silvestris]
Length = 212
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
Query: 128 AKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGI 187
AKR +A P S I NK+ V + + + P+AR+S+ +AG+R E D G
Sbjct: 15 AKRGYATCPRLVGDTSA-INVNVLENKLVVATADASVPVARVSIVLRAGSRNEAYDTQGA 73
Query: 188 THVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLAS 247
+H+LR A +ST+ + F I R++QQ GG+L DRE + YT+E + +++
Sbjct: 74 SHMLRLAGLMSTQRSSAFAIQRNIQQVGGTLTTWGDREIVGYTVETTADNVETGLRYMQD 133
Query: 248 VVGKTEFRPWEVSD 261
++ + F+PWE+ D
Sbjct: 134 LL-QPAFKPWEIKD 146
>gi|195495083|ref|XP_002095116.1| GE19862 [Drosophila yakuba]
gi|194181217|gb|EDW94828.1| GE19862 [Drosophila yakuba]
Length = 440
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
NK+ V + + T P++R+S+ AG+R E D G +H+LR A GLST+ + F I R++Q
Sbjct: 39 NKLVVATADATLPVSRVSLVLGAGSRNEAYDTQGASHLLRLAGGLSTQNSSAFAIARNIQ 98
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
Q GG+L DRE + YT+ ++L ++ + F+PWE+ D
Sbjct: 99 QVGGTLTTWGDREVVGYTVTTTADNAETGLRYLQDLL-QPAFKPWELVD 146
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 4 KEALAFAVLKYALGAGPA-----KTGKNQRSTNSKGLSRTPGRESLDESHHFSPPQALQA 58
KEALAFA+L+ ALGA A G + N G ++++ S+ +
Sbjct: 271 KEALAFAILEQALGAKAATKRGTSAGLFGEAVNCAG-GVGASVKAVNASYSDAGLFGFVV 329
Query: 59 SID----------VVRG---AGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTT 105
S D +VRG A + + D+ARGKALLK + + + + + RQA T
Sbjct: 330 SADSKDIGKTVEFLVRGLKSASVSEKDVARGKALLKARIISRYSSDGGLIKEIGRQAALT 389
Query: 106 GVVKSLPDLLAEVEAVSSSDV 126
V LL+ ++ +S S V
Sbjct: 390 RNVLEADALLSAIDGISQSQV 410
>gi|195328169|ref|XP_002030789.1| GM25644 [Drosophila sechellia]
gi|194119732|gb|EDW41775.1| GM25644 [Drosophila sechellia]
Length = 436
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
NK+ V + + T P++R+S+ AG+R E+ D G +H+LR A GLST+ + F I R++Q
Sbjct: 39 NKLVVATADATLPVSRVSLVLGAGSRNESYDIQGASHLLRLAGGLSTQNSSAFAIARNIQ 98
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
Q GG+L DRE + YT+ ++L ++ + F+PWE+ D
Sbjct: 99 QVGGTLTTWGDREVVGYTVTTTADNAETGLRYLQDLL-QPAFKPWELVD 146
>gi|397495401|ref|XP_003818545.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome b-c1 complex subunit 2,
mitochondrial-like [Pan paniscus]
Length = 471
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%)
Query: 114 LLAEVEAVSSSDVSAKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAF 173
++ ++E++ S V+ K A P A D++ N + + P +RI +
Sbjct: 22 VMEDLESLYSLKVAPKVKATATPTGVAPHHQDLEIIKFPNGFMISPLENYXPASRIGLFI 81
Query: 174 KAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEA 233
KAG+ YE +NL +H+L A+ L+T+ + F I +++AGG L RE I Y +E
Sbjct: 82 KAGSSYEDSNNLVTSHLLCLASSLTTKGASFFKIAHDIEEAGGKLSVIATRENIAYIMEC 141
Query: 234 VRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
++ +I + +FL SV + F WEV L +L+ DR
Sbjct: 142 LQSDIDILMEFLLSVATASGFGHWEVDXLQSQLRIDR 178
>gi|405966779|gb|EKC32019.1| Cytochrome b-c1 complex subunit 2, mitochondrial [Crassostrea
gigas]
Length = 479
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 6/125 (4%)
Query: 136 PATKALFSPDIQSGTSYNKVKVVS---VNETSPIARISVAFKAGARYETPDNLGITHVLR 192
P T+ + D++ T NKVKVV+ +N +S I ++S KAG+RYETP G+TH LR
Sbjct: 23 PVTR---TEDMKVLTLGNKVKVVALDNINTSSSIGQVSFYIKAGSRYETPYQQGVTHYLR 79
Query: 193 SAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKT 252
+ A F+ F + + + AGG+L RE +YT+E E+ K+L +++ K
Sbjct: 80 ATALNHAGPFSGFKLTKSIDLAGGNLSVQTTREHTIYTVEGPVYEMADFTKYLGAILTKP 139
Query: 253 EFRPW 257
++ W
Sbjct: 140 KYDTW 144
>gi|255549792|ref|XP_002515947.1| mitochondrial processing peptidase alpha subunit, putative [Ricinus
communis]
gi|223544852|gb|EEF46367.1| mitochondrial processing peptidase alpha subunit, putative [Ricinus
communis]
Length = 492
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 65/122 (53%)
Query: 146 IQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHF 205
++S T N V++VS SP A I + G+ YETP + G TH+L A ST +H
Sbjct: 76 VKSKTLENGVRIVSEATPSPAASIGLYIDCGSIYETPMSCGATHLLERMAFKSTRNRSHL 135
Query: 206 GIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPR 265
I+R V+ GG++ A+ RE + YT +A+R I + + L V F WEV + +
Sbjct: 136 RIVREVEAIGGNIGASASREQMAYTFDALRTHIPEMVELLVDCVRNPVFLDWEVDEELKK 195
Query: 266 LK 267
LK
Sbjct: 196 LK 197
>gi|395527252|ref|XP_003765764.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome b-c1 complex subunit 2,
mitochondrial-like [Sarcophilus harrisii]
Length = 438
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
Query: 152 YNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHV 211
YN V +VSV +P +RI + KAG+R E + G +H+LR A+ L T+ + F I R
Sbjct: 32 YNLV-IVSVENYAPASRIGLYIKAGSRXEDSTHFGASHLLRLASDLITKGASSFKITRGT 90
Query: 212 QQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
+ GG+L T RE + Y E + ++ + + L + EF+ WEV+DL +LK D+
Sbjct: 91 EAVGGTLSVTSTRENMAYAAECLXDDVDILMELLLTA---PEFQRWEVADLQSQLKIDK 146
>gi|410036919|ref|XP_003950150.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome b-c1 complex subunit 2,
mitochondrial-like [Pan troglodytes]
Length = 499
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 62/118 (52%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + P +RI + KAG+ YE +NL +H+L A+ L+T+ + F I V+
Sbjct: 89 NGFMISPLENYXPASRIGLFIKAGSSYEDSNNLVTSHLLCLASSLTTKGASFFKIAHDVE 148
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
AGG L RE I Y +E ++ +I + +FL SV F WEV L +L+ DR
Sbjct: 149 AAGGKLSVIATRENIAYIMECLQSDIDILMEFLLSVATAPGFGHWEVDXLQSQLRIDR 206
>gi|449487989|ref|XP_004157901.1| PREDICTED: mitochondrial-processing peptidase subunit alpha-like
[Cucumis sativus]
Length = 505
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 60/115 (52%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N VKV S P+A I + G+ YETP+ G TH+L A +T +H ++R V+
Sbjct: 82 NGVKVASETSPDPVASIGLYVDCGSSYETPETFGSTHLLERMAFKTTSNRSHLRVVREVE 141
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLK 267
GG++ A+ RE + YT A++ + + + L V F WEV++ R+K
Sbjct: 142 AIGGNVLASAAREQMGYTFNALKSYVPEIVELLVDCVRNPVFLDWEVNEQLSRVK 196
>gi|256085744|ref|XP_002579073.1| subfamily M16B non-peptidase homologue (M16 family) [Schistosoma
mansoni]
gi|353233168|emb|CCD80523.1| subfamily M16B non-peptidase homologue (M16 family) [Schistosoma
mansoni]
Length = 345
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Query: 145 DIQSGTSYNKVKVVSVNETSP---IARISVAFKAGARYETPDNLGITHVLRSAAGLSTEE 201
D+ S +K+VS+ + S RI++ K+G+RYE+ N GI+H++R + G+ST E
Sbjct: 31 DVSVTQSAEGIKLVSLPQLSLGFGCTRIALVVKSGSRYESSKNRGISHLVRRSFGMSTPE 90
Query: 202 FTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
T + RH QQ G + RE ++YT++ L S+ + WE+ D
Sbjct: 91 LTSVNLTRHFQQMGARVQCATTREHMIYTVDVAPNFASRAGFLLCSMASSPCYYAWELKD 150
Query: 262 LTPRL 266
+ +L
Sbjct: 151 IVYKL 155
>gi|17569737|ref|NP_510521.1| Protein UCR-2.2 [Caenorhabditis elegans]
gi|5824616|emb|CAA96675.2| Protein UCR-2.2 [Caenorhabditis elegans]
Length = 422
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + V +++ PIA + +AF+AG+RYE + G++H +R+ G T+E+ ++ +
Sbjct: 29 NGLTVGTIDSHKPIAHLVLAFRAGSRYEKANQAGLSHTIRNFVGRDTQEYFGNTVVWTLS 88
Query: 213 QAGGSL--YATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
Q GG L + + D G+ TI +G L V G F+PWEV D+ P ++ D
Sbjct: 89 QTGGVLKSFTSRDLFGVSLTIPRESTSVGL--SVLGQVAGNPGFKPWEVEDVLPTMRADN 146
Query: 271 LTR 273
R
Sbjct: 147 GYR 149
>gi|449446550|ref|XP_004141034.1| PREDICTED: mitochondrial-processing peptidase subunit alpha-like
[Cucumis sativus]
Length = 505
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 60/115 (52%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N VKV S P+A I + G+ YETP+ G TH+L A +T +H ++R V+
Sbjct: 82 NGVKVASETSPDPVASIGLYVDCGSSYETPETFGSTHLLERMAFKTTSNRSHLRVVREVE 141
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLK 267
GG++ A+ RE + YT A++ + + + L V F WEV++ R+K
Sbjct: 142 AIGGNVLASAAREQMGYTFNALKSYVPEMVELLVDCVRNPVFLDWEVNEQLSRVK 196
>gi|357520795|ref|XP_003630686.1| Mitochondrial-processing peptidase subunit alpha [Medicago
truncatula]
gi|355524708|gb|AET05162.1| Mitochondrial-processing peptidase subunit alpha [Medicago
truncatula]
Length = 510
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N VKV S SP A I + G+ YETP G TH+L A +T +HF ++R V+
Sbjct: 88 NGVKVASETSPSPAASIGLYVDCGSIYETPLTFGATHLLERMAFKTTVNRSHFRVVREVE 147
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG++ A+ RE + YT +A++ + + + L +V F WEV++
Sbjct: 148 AIGGNVQASASREQMGYTFDALKTYVPEMVELLVDIVRNPAFLDWEVNE 196
>gi|217075747|gb|ACJ86233.1| unknown [Medicago truncatula]
gi|388515299|gb|AFK45711.1| unknown [Medicago truncatula]
Length = 510
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N VKV S SP A I + G+ YETP G TH+L A +T +HF ++R V+
Sbjct: 88 NGVKVASETSPSPAASIGLYVDCGSIYETPLTFGATHLLERMAFKTTVNRSHFRVVREVE 147
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG++ A+ RE + YT +A++ + + + L +V F WEV++
Sbjct: 148 AIGGNVQASASREQMGYTFDALKTYVPEMVELLVDIVRNPAFLDWEVNE 196
>gi|226482326|emb|CAX73762.1| Ubiquinol-cytochrome-c reductase complex core protein 2,
mitochondrial precursor [Schistosoma japonicum]
gi|226482328|emb|CAX73763.1| Ubiquinol-cytochrome-c reductase complex core protein 2,
mitochondrial precursor [Schistosoma japonicum]
Length = 471
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 6/135 (4%)
Query: 145 DIQSGTSYNKVKVVSVNETS---PIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEE 201
D+ S +K+VS+ + S AR+++ K+G R E+ N GI+H++R + G+ST E
Sbjct: 38 DVLITQSAEGIKLVSLPQPSLGLGCARVALVVKSGPRCESSKNRGISHLMRRSFGISTPE 97
Query: 202 FTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
T + RH+QQ G + T RE ++YT++ L S+ + + WE++D
Sbjct: 98 LTSVNLTRHLQQMGARVQCTTTREHMIYTVDVAPNFAVRAGYLLCSMASASCYYSWELND 157
Query: 262 LTPRLK---YDRLTR 273
+ +L D L R
Sbjct: 158 IVYKLMRKDVDTLNR 172
>gi|56758852|gb|AAW27566.1| SJCHGC01621 protein [Schistosoma japonicum]
Length = 471
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 6/135 (4%)
Query: 145 DIQSGTSYNKVKVVSVNETS---PIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEE 201
D+ S +K+VS+ + S AR+++ K+G R E+ N GI+H++R + G+ST E
Sbjct: 38 DVLITQSAEGIKLVSLPQPSLGLGCARVALVVKSGPRCESSKNRGISHLMRRSFGISTPE 97
Query: 202 FTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
T + RH+QQ G + T RE ++YT++ L S+ + + WE++D
Sbjct: 98 LTSVNLTRHLQQMGARVQCTTTREHMIYTVDVAPNFAVRAGYLLCSMASASCYYSWELND 157
Query: 262 LTPRLK---YDRLTR 273
+ +L D L R
Sbjct: 158 IVYKLMRKDVDTLNR 172
>gi|266567|sp|P29677.1|MPPA_SOLTU RecName: Full=Mitochondrial-processing peptidase subunit alpha;
AltName: Full=Alpha-MPP; AltName:
Full=Ubiquinol-cytochrome-c reductase subunit II; Flags:
Precursor
gi|21493|emb|CAA46990.1| mitochondrial processing peptidase [Solanum tuberosum]
Length = 504
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%)
Query: 147 QSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFG 206
Q T N +KV S +P A I + G+ YETP + G TH+L A ST +H
Sbjct: 76 QITTLANGLKVASEASVNPAASIGLYVDCGSIYETPASYGATHLLERMAFKSTLNRSHLR 135
Query: 207 IIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
I+R ++ GG++ A+ RE ++YT +A++ + + + LA V F WEV
Sbjct: 136 IVREIEAIGGNVTASASREHMIYTYDALKTYVPQMVEMLADCVRNPAFLDWEV 188
>gi|357613828|gb|EHJ68739.1| cytochrome b-c1 complex subunit 2, mitochondrial [Danaus plexippus]
Length = 455
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Query: 153 NKVKVVSVNETSPI-ARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHV 211
N +K+ S +T + A ++ F+AG+RYET D+LG TH LR A+ T F +R +
Sbjct: 41 NGIKITSAQDTGFMFAACTIMFQAGSRYETHDDLGATHFLRLASTGGGCRATAFSKLRVL 100
Query: 212 QQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDL 262
QQAG + T+DR+ + YT+ + +L + WE++DL
Sbjct: 101 QQAGAYITTTLDRQTVAYTLRCPLHMFSDLKYYLLDTAVGCCYHDWEITDL 151
>gi|341902200|gb|EGT58135.1| hypothetical protein CAEBREN_18020 [Caenorhabditis brenneri]
Length = 410
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +KV SV + I +AF+AG+RY+ + G+TH++R++ G EF ++ +
Sbjct: 32 NGLKVASVELNGATSSIVLAFRAGSRYQPANKQGLTHLIRNSVGRDAPEFPGLALVWNTA 91
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDRL 271
Q GG L A +R+ + + VR + L +G F+PW+V D +K+D L
Sbjct: 92 QNGGQLTAVSNRDVLAIEVNVVRDQSAVALSLLGQ-LGNNAFKPWDVED----VKHDTL 145
>gi|225712300|gb|ACO11996.1| Cytochrome b-c1 complex subunit 2, mitochondrial precursor
[Lepeophtheirus salmonis]
Length = 451
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFK-AGARYETPDNLGITHVLRSAAGLSTEEF 202
P ++ S + + +++ PI + V AG+ ET N G++H LR + GLST+ F
Sbjct: 33 PKYETNKSVSGIHYCNLDNPKPIVNLMVMVNGAGSSSETYKNEGVSHALRLSCGLSTKNF 92
Query: 203 THFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
T FG IR+VQQ G +L RE ++Y+++ R FL V + WE+ D
Sbjct: 93 TRFGTIRNVQQLGTALECIQTRENLIYSMKIHRDYFLDGLDFLRENVVCPSLKKWEIED 151
>gi|356513189|ref|XP_003525296.1| PREDICTED: mitochondrial-processing peptidase subunit alpha-like
isoform 1 [Glycine max]
Length = 511
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +KV S SP A I + G+ YE+P + G TH+L A +T +HF ++R V+
Sbjct: 90 NGLKVASETSPSPTASIGLYVDCGSIYESPISFGATHLLERMAFKTTRNRSHFRVVREVE 149
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG++ A+ RE + YT +A++ + + + L V F WEV++
Sbjct: 150 AIGGNVQASASREQMGYTFDALKTYVPEMVELLVDCVRNPVFLDWEVNE 198
>gi|356513191|ref|XP_003525297.1| PREDICTED: mitochondrial-processing peptidase subunit alpha-like
isoform 2 [Glycine max]
Length = 508
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +KV S SP A I + G+ YE+P + G TH+L A +T +HF ++R V+
Sbjct: 87 NGLKVASETSPSPTASIGLYVDCGSIYESPISFGATHLLERMAFKTTRNRSHFRVVREVE 146
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG++ A+ RE + YT +A++ + + + L V F WEV++
Sbjct: 147 AIGGNVQASASREQMGYTFDALKTYVPEMVELLVDCVRNPVFLDWEVNE 195
>gi|268581779|ref|XP_002645873.1| C. briggsae CBR-UCR-2.2 protein [Caenorhabditis briggsae]
Length = 483
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 4/119 (3%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFG--IIRH 210
N + V +V+ PI ++ +AF+AG+RYETP G++H LR+ G +++ HFG I+
Sbjct: 31 NGLTVATVDSKKPITQLVLAFRAGSRYETPAQAGLSHTLRNFVGRDSKD--HFGSAIVWS 88
Query: 211 VQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYD 269
GG + + R+ ++ R + LA F+PWE+ D+ P ++ D
Sbjct: 89 ASTYGGVVKSFTSRDLFGVSLTVPRDSTSYALHVLAQAAAVPGFKPWEIEDVLPTMRAD 147
>gi|356523720|ref|XP_003530483.1| PREDICTED: mitochondrial-processing peptidase subunit alpha-like
[Glycine max]
Length = 509
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +KV S +P A + + G+ YETP + G TH+L A +T +HF ++R V+
Sbjct: 88 NGLKVASETSPTPTASVGLYVDCGSIYETPISFGATHLLERMAFKTTRNRSHFRVVREVE 147
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG++ A+ RE + YT +A++ + + + L V F WEV++
Sbjct: 148 AIGGNVQASASREQMGYTFDALKTYVPEMVELLVDCVRNPVFLDWEVNE 196
>gi|358341501|dbj|GAA49165.1| cytochrome b-c1 complex subunit 2 mitochondrial [Clonorchis
sinensis]
Length = 498
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 127 SAKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPI-ARISVAFKAGARYETPD-N 184
+A S AA+P+T + SP + + ++ +S P +R+++ F AG+RYE +
Sbjct: 47 NAVTSAAAKPST--VPSPLLSTSEEGFQLACISQPSLWPCYSRVAIVFNAGSRYEREGKD 104
Query: 185 LGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKF 244
GITH++R + GLST + + + RH+QQ G + T RE ++YT++ +
Sbjct: 105 RGITHLIRRSCGLSTFDHSAVNMTRHLQQMGARVTCTTTREHMIYTVDVAPNLVSRAGSI 164
Query: 245 LASVVGKTEFRPWEV 259
LA + + F WE+
Sbjct: 165 LAELATSSAFYHWEL 179
>gi|356522822|ref|XP_003530042.1| PREDICTED: mitochondrial-processing peptidase subunit alpha-like
[Glycine max]
Length = 505
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +K+ S +P A I + G+ YETP + G++H+L A ST +HF I+R V+
Sbjct: 84 NGLKIASETSPNPAASIGLYLDCGSIYETPLSSGVSHLLERMAFKSTTNRSHFRIVREVE 143
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG++ A+ RE + YT +A++ + + L V F WEV++
Sbjct: 144 AIGGNIGASASREQMGYTFDALKTYAPQMVELLVDCVRNPAFLDWEVNE 192
>gi|17570205|ref|NP_510011.1| Protein UCR-2.1, isoform a [Caenorhabditis elegans]
gi|5824643|emb|CAB54320.1| Protein UCR-2.1, isoform a [Caenorhabditis elegans]
Length = 410
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N ++V SV + I +AF+AG+RY+ + G+TH++R++ G F ++ +
Sbjct: 32 NGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHLIRNSVGRDAPNFPGLALVWNTA 91
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDRL 271
Q GG+L A +R+ + + VR + V L +G F+PW+V D +K+D L
Sbjct: 92 QNGGNLTAVSNRDVLAIEVNVVRDQSAVVLSLLGQ-LGNNAFKPWDVED----VKHDTL 145
>gi|32566323|ref|NP_510012.2| Protein UCR-2.1, isoform b [Caenorhabditis elegans]
gi|24817559|emb|CAC35829.2| Protein UCR-2.1, isoform b [Caenorhabditis elegans]
Length = 424
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N ++V SV + I +AF+AG+RY+ + G+TH++R++ G F ++ +
Sbjct: 46 NGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHLIRNSVGRDAPNFPGLALVWNTA 105
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDRL 271
Q GG+L A +R+ + + VR + V L +G F+PW+V D +K+D L
Sbjct: 106 QNGGNLTAVSNRDVLAIEVNVVRDQSAVVLSLLGQ-LGNNAFKPWDVED----VKHDTL 159
>gi|302821857|ref|XP_002992589.1| hypothetical protein SELMODRAFT_448827 [Selaginella moellendorffii]
gi|300139553|gb|EFJ06291.1| hypothetical protein SELMODRAFT_448827 [Selaginella moellendorffii]
Length = 512
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + V S N P A I V +G+ +ETP N G++H+L A ST TH ++R +
Sbjct: 92 NGLTVASENTMGPTATIGVYVDSGSSHETPFNSGVSHILERMAFKSTRNRTHLRLVREAE 151
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
GG++ A+ RE + YT + +R + + + LA + F WE+
Sbjct: 152 AIGGNVLASASREQMSYTGDVIRSFVPEIVELLADSIRNPAFHDWEI 198
>gi|357513541|ref|XP_003627059.1| Mitochondrial-processing peptidase subunit alpha [Medicago
truncatula]
gi|355521081|gb|AET01535.1| Mitochondrial-processing peptidase subunit alpha [Medicago
truncatula]
Length = 507
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +K+ S ++P A I + G+ YETP G +H+L A ST +HF I+R ++
Sbjct: 85 NGLKIASETSSNPAASIGLYLDCGSIYETPLTSGASHLLERMAFKSTVNRSHFRIVREIE 144
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG++ A+ RE + YT +A++ + + + L V F WEV++
Sbjct: 145 AIGGNIGASASREQMGYTFDALKTYVPQMIELLVDCVRNPAFLDWEVNE 193
>gi|355732136|gb|AES10601.1| cytochrome b-c1 complex subunit 2, mitochondrial-like protein
[Mustela putorius furo]
Length = 128
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P +RI + KAG+R+E +NLG +H+LR A+ L+T+ + F I R ++
Sbjct: 45 NGLVIASLENYAPASRIGLFIKAGSRHEDSNNLGTSHLLRLASSLTTKGASSFKITRGIE 104
Query: 213 QAGGSLYATVDREGIVYTIEAVR 235
GG L T RE + YT+E +R
Sbjct: 105 AVGGKLSVTSTRESMAYTVECLR 127
>gi|308488941|ref|XP_003106664.1| CRE-UCR-2.1 protein [Caenorhabditis remanei]
gi|308253318|gb|EFO97270.1| CRE-UCR-2.1 protein [Caenorhabditis remanei]
Length = 410
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 12/150 (8%)
Query: 124 SDVSAKRSFAAQPATKALFSPDIQSGTSY--NKVKVVSVNETSPIARISVAFKAGARYET 181
S V AKR FA+ A A +Q T+ N ++V SV + I +AF+AG+RY+
Sbjct: 6 SGVVAKR-FASAAAKSA----GVQERTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQP 60
Query: 182 PDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHV 241
+ G+TH++R++ G EF ++ + Q GG L A +R+ + + VR +
Sbjct: 61 ANKQGLTHLIRNSVGRDAPEFPGLALVWNTAQNGGQLTAVSNRDVLAIEVNVVRDQSAVA 120
Query: 242 HKFLASVVGKTEFRPWEVSDLTPRLKYDRL 271
L +G F+PW+V D +K+D L
Sbjct: 121 LSLLGQ-LGNNAFKPWDVED----VKHDTL 145
>gi|224059160|ref|XP_002299745.1| predicted protein [Populus trichocarpa]
gi|222847003|gb|EEE84550.1| predicted protein [Populus trichocarpa]
Length = 507
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 146 IQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHF 205
++S N + +VS ++P A + + G+ YETP + G TH+L A ST +H
Sbjct: 76 VESKVLENGLMIVSEASSNPAASVGLYLDCGSVYETPISCGATHLLERMAFKSTRNRSHL 135
Query: 206 GIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
I+R V+ GG++ A+ RE + YT +A++ + + L V F WEV+D
Sbjct: 136 RIVREVEAIGGNVAASASREQMGYTFDALKTYAPEMIELLIDCVRNPVFLDWEVND 191
>gi|587562|emb|CAA56520.1| mitochondrial processing peptidase [Solanum tuberosum]
Length = 504
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +K+ S SP A I + G+ YE P + G TH+L A ST +H I+R V+
Sbjct: 82 NGLKIASEISASPAASIGLYVDCGSIYEAPASYGATHLLERMAFKSTLNRSHLRIVREVE 141
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG++ A RE ++YT +A++ + + + L V F WEVS+
Sbjct: 142 AIGGNVTAAASREHLIYTYDALKTYVPQMVELLVDSVRNPAFLDWEVSE 190
>gi|356526071|ref|XP_003531643.1| PREDICTED: mitochondrial-processing peptidase subunit alpha-like
[Glycine max]
Length = 505
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +K+ S +P A I + G+ YETP + G +H+L A ST +HF I+R V+
Sbjct: 84 NGLKIASETSPNPAASIGLYLDCGSIYETPFSSGASHLLERMAFKSTTNRSHFRIVREVE 143
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG++ A+ RE + YT +A++ + + + L V F WEV++
Sbjct: 144 AIGGNVGASASREQMGYTFDALKTYVPQMVELLVDCVRHPAFLDWEVNE 192
>gi|255546263|ref|XP_002514191.1| mitochondrial processing peptidase alpha subunit, putative [Ricinus
communis]
gi|223546647|gb|EEF48145.1| mitochondrial processing peptidase alpha subunit, putative [Ricinus
communis]
Length = 507
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +K+ S +P A I + G+ YE+P G TH+L A ST +H ++R V+
Sbjct: 83 NGMKIASQTSPNPAASIGLYVNCGSIYESPATFGTTHLLEQMAFKSTRNRSHLRVVREVE 142
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
GG + A+ RE + YT +A+R + + + L V F WEV
Sbjct: 143 AIGGVVQASASREQMGYTFDALRTYVPEMVELLIDCVRNPVFLDWEV 189
>gi|225442426|ref|XP_002283426.1| PREDICTED: mitochondrial-processing peptidase subunit alpha [Vitis
vinifera]
gi|297743169|emb|CBI36036.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N VK+ S +P A I G+ YETP + G TH+L A ST +H ++R V+
Sbjct: 84 NGVKIASETSPNPAASIGFYVDCGSIYETPLSFGATHLLERMAFKSTTNRSHLRVVREVE 143
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG++ A+ RE + YT +A++ + + + L V F WEV++
Sbjct: 144 AIGGNVTASASREQMGYTFDALKTYVPEMVELLVDCVRNPVFLDWEVNE 192
>gi|225445041|ref|XP_002283310.1| PREDICTED: mitochondrial-processing peptidase subunit alpha [Vitis
vinifera]
gi|297738729|emb|CBI27974.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
Query: 133 AAQPATKALFSPD-IQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVL 191
A PA P ++ T N VK+ S +P A I + G+ YETP + G TH+L
Sbjct: 63 ALPPALPDYVEPSKVKITTISNGVKIASETSANPAASIGLYVDCGSIYETPISFGATHLL 122
Query: 192 RSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGK 251
A ST ++ +IR V+ GG++ A+ RE + YT +A++ + + + L V
Sbjct: 123 ERMAFKSTINRSYLRVIREVEAIGGNVTASASREQMGYTFDALKTYVPEMVELLIDSVRN 182
Query: 252 TEFRPWEVSD 261
F WEVS+
Sbjct: 183 PAFLDWEVSE 192
>gi|356556561|ref|XP_003546593.1| PREDICTED: mitochondrial-processing peptidase subunit alpha-like
[Glycine max]
Length = 491
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +K+ S +P A I + G+ YETP + G +H+L + ST +HF ++R V+
Sbjct: 69 NGLKIASETSPNPAASIGLYVDCGSLYETPLSSGASHLLEKMSFKSTANRSHFRVVREVE 128
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG++ A+ RE + YT +A++ + + + L V F WEV++
Sbjct: 129 AVGGNVGASASREQMGYTFDALKTYVPQMIELLVDCVRNPAFLDWEVNE 177
>gi|224035589|gb|ACN36870.1| unknown [Zea mays]
gi|413946163|gb|AFW78812.1| putative mitochondrial processing peptidase alpha subunit family
protein [Zea mays]
Length = 464
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N VK+ S +SP A + + G+ YETP + G++H+L A ST TH ++R V+
Sbjct: 42 NGVKIASETSSSPAASVGLYIDCGSIYETPASSGVSHLLERMAFKSTVNRTHLRLVREVE 101
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
GG++ A+ RE + YT +A++ + + L V F WEV
Sbjct: 102 AIGGNVSASASREQMSYTYDALKSYTPEMVEVLIDSVRNPAFLDWEV 148
>gi|224100219|ref|XP_002311791.1| predicted protein [Populus trichocarpa]
gi|222851611|gb|EEE89158.1| predicted protein [Populus trichocarpa]
Length = 510
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 58/109 (53%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +++ S SP+A I + G+ YE+P G TH+L A ST +H ++R V+
Sbjct: 86 NGLRIASETSPSPVASIGLYVDCGSVYESPATFGATHLLERMAFKSTRNRSHLRVVREVE 145
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG++ ++ RE + YT +A++ + + + L V F WEV++
Sbjct: 146 AIGGAVQSSASREQMGYTYDALKTYLPEMVELLIDCVRNPVFLDWEVNE 194
>gi|21594004|gb|AAM65922.1| mitochondrial processing peptidase alpha subunit, putative
[Arabidopsis thaliana]
Length = 503
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%)
Query: 146 IQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHF 205
+Q T N +K+ S +P A I + G+ YE P G TH+L A ST THF
Sbjct: 78 LQITTLPNGLKIASETTPNPAASIGLYVDCGSIYEAPYFHGATHLLERMAFKSTLNRTHF 137
Query: 206 GIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
++R ++ GG+ A+ RE + YTI+A++ + + + L V F WEV++
Sbjct: 138 RLVREIEAIGGNTSASASREQMSYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVNE 193
>gi|15218090|ref|NP_175610.1| putative mitochondrial-processing peptidase subunit alpha-1
[Arabidopsis thaliana]
gi|29839695|sp|Q9ZU25.1|MPPA1_ARATH RecName: Full=Probable mitochondrial-processing peptidase subunit
alpha-1; AltName: Full=Alpha-MPP 1; Flags: Precursor
gi|4220446|gb|AAD12673.1| Strong similarity to gi|2062155 T02O04.2 mitochondrial processing
peptidase alpha subunit precusor isolog from Arabidopsis
thaliana BAC gb|AC001645. ESTs gb|Z18504 and gb|AA395715
come from this gene [Arabidopsis thaliana]
gi|17529270|gb|AAL38862.1| putative mitochondrial processing peptidase alpha subunit
[Arabidopsis thaliana]
gi|20258957|gb|AAM14194.1| putative mitochondrial processing peptidase alpha subunit
[Arabidopsis thaliana]
gi|332194621|gb|AEE32742.1| putative mitochondrial-processing peptidase subunit alpha-1
[Arabidopsis thaliana]
Length = 503
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%)
Query: 146 IQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHF 205
+Q T N +K+ S +P A I + G+ YE P G TH+L A ST THF
Sbjct: 78 LQITTLPNGLKIASETTPNPAASIGLYVDCGSIYEAPYFHGATHLLERMAFKSTLNRTHF 137
Query: 206 GIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
++R ++ GG+ A+ RE + YTI+A++ + + + L V F WEV++
Sbjct: 138 RLVREIEAIGGNTSASASREQMSYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVNE 193
>gi|226498098|ref|NP_001146680.1| uncharacterized protein LOC100280280 [Zea mays]
gi|219888281|gb|ACL54515.1| unknown [Zea mays]
Length = 499
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N VK+ S +SP A + + G+ YETP + G++H+L A ST TH ++R V+
Sbjct: 77 NGVKIASETSSSPAASVGLYIDCGSIYETPASSGVSHLLERMAFKSTVNRTHLRLVREVE 136
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
GG++ A+ RE + YT +A++ + + L V F WEV
Sbjct: 137 AIGGNVSASASREQMSYTYDALKSYTPEMVEVLIDSVRNPAFLDWEV 183
>gi|413946162|gb|AFW78811.1| putative mitochondrial processing peptidase alpha subunit family
protein [Zea mays]
Length = 499
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N VK+ S +SP A + + G+ YETP + G++H+L A ST TH ++R V+
Sbjct: 77 NGVKIASETSSSPAASVGLYIDCGSIYETPASSGVSHLLERMAFKSTVNRTHLRLVREVE 136
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
GG++ A+ RE + YT +A++ + + L V F WEV
Sbjct: 137 AIGGNVSASASREQMSYTYDALKSYTPEMVEVLIDSVRNPAFLDWEV 183
>gi|110741046|dbj|BAE98617.1| hypothetical protein [Arabidopsis thaliana]
Length = 494
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%)
Query: 146 IQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHF 205
+Q T N +K+ S +P A I + G+ YE P G TH+L A ST THF
Sbjct: 78 LQITTLPNGLKIASETTPNPAASIGLYVDCGSIYEAPYFHGATHLLERMAFKSTLNRTHF 137
Query: 206 GIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
++R ++ GG+ A+ RE + YTI+A++ + + + L V F WEV++
Sbjct: 138 RLVREIEAIGGNTSASASREQMSYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVNE 193
>gi|357136334|ref|XP_003569760.1| PREDICTED: mitochondrial-processing peptidase subunit alpha-like
[Brachypodium distachyon]
Length = 463
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +K+ S SP A + + G+ YETP++ G +H+L A ST +H ++R V+
Sbjct: 41 NGIKIASETSMSPAASVGLYVDCGSIYETPNSSGASHLLERMAFKSTTNRSHLRLVREVE 100
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLK 267
GG++ A+ RE + YT +A + + + + L V F WEV + ++K
Sbjct: 101 SIGGNISASASREQMCYTYDAFKAYVPDMVEVLIDSVRNPAFFDWEVQEQLQKIK 155
>gi|413946161|gb|AFW78810.1| putative mitochondrial processing peptidase alpha subunit family
protein [Zea mays]
Length = 190
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N VK+ S +SP A + + G+ YETP + G++H+L A ST TH ++R V+
Sbjct: 77 NGVKIASETSSSPAASVGLYIDCGSIYETPASSGVSHLLERMAFKSTVNRTHLRLVREVE 136
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
GG++ A+ RE + YT +A++ + + L V F WEV
Sbjct: 137 AIGGNVSASASREQMSYTYDALKSYTPEMVEVLIDSVRNPAFLDWEV 183
>gi|145324909|ref|NP_001077701.1| putative mitochondrial-processing peptidase subunit alpha-1
[Arabidopsis thaliana]
gi|332194622|gb|AEE32743.1| putative mitochondrial-processing peptidase subunit alpha-1
[Arabidopsis thaliana]
Length = 451
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%)
Query: 146 IQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHF 205
+Q T N +K+ S +P A I + G+ YE P G TH+L A ST THF
Sbjct: 78 LQITTLPNGLKIASETTPNPAASIGLYVDCGSIYEAPYFHGATHLLERMAFKSTLNRTHF 137
Query: 206 GIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
++R ++ GG+ A+ RE + YTI+A++ + + + L V F WEV++
Sbjct: 138 RLVREIEAIGGNTSASASREQMSYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVNE 193
>gi|449462912|ref|XP_004149179.1| PREDICTED: mitochondrial-processing peptidase subunit alpha-like
[Cucumis sativus]
gi|449489994|ref|XP_004158479.1| PREDICTED: mitochondrial-processing peptidase subunit alpha-like
[Cucumis sativus]
Length = 505
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 61/115 (53%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N V++ S ++P A I + G+ YETP + G +H+L A ST +H I+R V+
Sbjct: 83 NGVRIASETSSNPAASIGIYLDCGSIYETPLSSGASHLLERLAFKSTTNRSHLRIVREVE 142
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLK 267
GG+ A+ RE + YT +A++ + + + L V F WE+++ +LK
Sbjct: 143 AIGGNTGASASREQMGYTFDALKTYVPEMVELLVDCVRNPVFLDWEINEELQKLK 197
>gi|341884694|gb|EGT40629.1| hypothetical protein CAEBREN_21909 [Caenorhabditis brenneri]
Length = 219
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFG--IIRH 210
N + V +V+ P+ ++ +AF+AG+RYE + G+TH LR+ G +++ HFG I+
Sbjct: 33 NGLTVATVDSQKPLTQLVLAFRAGSRYEKANQAGLTHTLRNFVGRDSKD--HFGSAIVWS 90
Query: 211 VQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
GG + + R+ ++ R + LA F+PWE+ D+ P ++ D
Sbjct: 91 ASNYGGVVKSFTSRDLFGVSVTVPRDSSSYALHVLAQAAANPGFKPWEIEDVLPTMRADN 150
Query: 271 LTR 273
R
Sbjct: 151 GYR 153
>gi|384247600|gb|EIE21086.1| LuxS/MPP-like metallohydrolase [Coccomyxa subellipsoidea C-169]
Length = 506
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N V + S P A + + +G+ YE+P G++H+L A ST THF ++R V+
Sbjct: 85 NGVTIASEQTLGPTATLGLYVNSGSVYESPSETGLSHLLEYMAFKSTSNRTHFRLVREVE 144
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYD 269
G ++ A+ RE + Y I+ V+ + + L V +F WEV+ +++ D
Sbjct: 145 AIGANVLASASREQMAYNIDVVKTNVPDALEILVDSVVNPKFLSWEVNAAIDKMRED 201
>gi|294463383|gb|ADE77223.1| unknown [Picea sitchensis]
Length = 510
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 58/107 (54%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +KV S + +SP A I + G+ YETP + G TH+L A +T +H ++R V+
Sbjct: 88 NGLKVASEDSSSPTASIGLYVDCGSVYETPLSSGATHLLERMAFKTTRNRSHLRMVREVE 147
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
GG++ A+ RE + YT +A++ + + + L V F WEV
Sbjct: 148 AIGGNVTASASREQMGYTFDALKTYLPEMVELLVDSVRNPVFLDWEV 194
>gi|297852934|ref|XP_002894348.1| hypothetical protein ARALYDRAFT_474319 [Arabidopsis lyrata subsp.
lyrata]
gi|297340190|gb|EFH70607.1| hypothetical protein ARALYDRAFT_474319 [Arabidopsis lyrata subsp.
lyrata]
Length = 503
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +K+ S +P A I + G+ YE P G TH+L A ST THF ++R ++
Sbjct: 85 NGLKIASETSPNPAASIGLYVDCGSIYEAPYFHGATHLLERMAFKSTLNRTHFRLVREIE 144
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG+ A+ RE + YTI+A++ + + + L V F WEV++
Sbjct: 145 AIGGNTSASASREQMSYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVNE 193
>gi|297830258|ref|XP_002883011.1| mppalpha [Arabidopsis lyrata subsp. lyrata]
gi|297328851|gb|EFH59270.1| mppalpha [Arabidopsis lyrata subsp. lyrata]
Length = 514
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +K+ S +P A I + G+ YETP G TH+L A ST +HF ++R ++
Sbjct: 85 NGLKIASEMSLNPAASIGLYVDCGSIYETPQFRGATHLLERMAFKSTLNRSHFRLVREIE 144
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG+ A+ RE + YTI+A++ + + + L V F WEV++
Sbjct: 145 AMGGNTSASASREQMGYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVNE 193
>gi|326490611|dbj|BAJ89973.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 465
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 64/118 (54%), Gaps = 3/118 (2%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQA 214
VKV ++ P ISV KAG+RYET G+ H L++ A +T + I+R +
Sbjct: 61 VKVAGIDVGQPTTSISVVVKAGSRYETLP--GVAHALKNFAFKATSNASALRIVREAELY 118
Query: 215 GGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLT-PRLKYDRL 271
GG+L A + RE + E +R + H K LASV+ +++ P E ++L P L+ + L
Sbjct: 119 GGTLSAGLSREHLYLNAEFLRGDQDHFVKLLASVLSASKYHPHEFAELVMPTLQSETL 176
>gi|449672203|ref|XP_004207658.1| PREDICTED: cytochrome b-c1 complex subunit 2, mitochondrial-like
[Hydra magnipapillata]
Length = 391
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 70/126 (55%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N ++V S++ +++++++ ++G+RYE+ N GI+ ++++AA ++ ++ + +R +Q
Sbjct: 56 NGIRVASIDNGGSVSKLAISLQSGSRYESVTNQGISQLVKNAAFMANKDRSALRTVREMQ 115
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDRLT 272
GGSL + RE I +R ++ + + +AS F WE+S++ + + T
Sbjct: 116 DIGGSLECSTSREAITRQASFLRNKLVNAMQIMASAFNGPLFYNWELSEVKKMCRMENAT 175
Query: 273 RPSQGN 278
+ N
Sbjct: 176 YAANEN 181
>gi|312075537|ref|XP_003140461.1| peptidase M16 inactive domain-containing protein [Loa loa]
gi|307764377|gb|EFO23611.1| peptidase M16 inactive domain-containing protein [Loa loa]
Length = 441
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + V SV+ PIA++ VA++AG RYE PD G+ H +R+ G + + ++
Sbjct: 36 NGLTVASVDLGGPIAQLVVAYRAGTRYEMPDEAGLVHHIRNCIGGDSPRYYGAQLLWQCG 95
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
AG ++ + R+ + + +R L + + F+PW+V D L+ DR
Sbjct: 96 SAGATVNGIMTRDLLAVQMSVIRDRAPLGLSLLGE-LAQPAFKPWDVVDFKETLRVDR 152
>gi|224100403|ref|XP_002311862.1| predicted protein [Populus trichocarpa]
gi|222851682|gb|EEE89229.1| predicted protein [Populus trichocarpa]
Length = 506
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +++ S +P A I + G+ YE+P G THVL A ST +H ++R V+
Sbjct: 82 NGLRIASETSPNPAASIGLYVDCGSIYESPATFGATHVLERMAFKSTRNRSHLRVVREVE 141
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GGS+ ++ RE + YT +A++ + + + L V F WE ++
Sbjct: 142 AIGGSVQSSASREQMGYTYDALKTYLPEMVELLIDCVRNPVFLDWEFNE 190
>gi|324509842|gb|ADY44125.1| Cytochrome b-c1 complex subunit 2 [Ascaris suum]
Length = 441
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + V S++ ++++ +AF+AGARYE P G+ H LR+A G+ ++ + ++
Sbjct: 36 NGLTVASLDMAGAVSQLVIAFRAGARYEEPREAGLVHHLRNAVGIDSKNYLGAQMLWQCG 95
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
G +L +T+ R+ + +R L + ++ F+PW++ ++ L DR
Sbjct: 96 SVGANLMSTMSRDLFAVQMSVLRDHASVALSLLGE-LAQSAFKPWDMEEVYGTLYIDR 152
>gi|125571961|gb|EAZ13476.1| hypothetical protein OsJ_03392 [Oryza sativa Japonica Group]
Length = 535
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +K+ S SP A + + G+ YETP + G +H+L A ST +H ++R V+
Sbjct: 129 NGIKIASETSVSPAASVGLYIDCGSIYETPASSGASHLLERMAFKSTTNRSHLRLVREVE 188
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLK 267
GG++ A+ RE + YT +A + + + + L V F WE+ + ++K
Sbjct: 189 AIGGNVSASASREQMCYTYDAFKAYVPEMVEVLIDSVRNPAFFNWEIKEQLEKIK 243
>gi|218189022|gb|EEC71449.1| hypothetical protein OsI_03671 [Oryza sativa Indica Group]
Length = 563
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +K+ S SP A + + G+ YETP + G +H+L A ST +H ++R V+
Sbjct: 129 NGIKIASETSVSPAASVGLYIDCGSIYETPASSGASHLLERMAFKSTTNRSHLRLVREVE 188
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLK 267
GG++ A+ RE + YT +A + + + + L V F WE+ + ++K
Sbjct: 189 AIGGNVSASASREQMCYTYDAFKAYVPEMVEVLIDSVRNPAFFNWEIKEQLEKIK 243
>gi|115439827|ref|NP_001044193.1| Os01g0739000 [Oryza sativa Japonica Group]
gi|57899480|dbj|BAD86941.1| putative mitochondrial processing peptidase [Oryza sativa Japonica
Group]
gi|113533724|dbj|BAF06107.1| Os01g0739000 [Oryza sativa Japonica Group]
gi|215697499|dbj|BAG91493.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215707190|dbj|BAG93650.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 499
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +K+ S SP A + + G+ YETP + G +H+L A ST +H ++R V+
Sbjct: 77 NGIKIASETSVSPAASVGLYIDCGSIYETPASSGASHLLERMAFKSTTNRSHLRLVREVE 136
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLK 267
GG++ A+ RE + YT +A + + + + L V F WE+ + ++K
Sbjct: 137 AIGGNVSASASREQMCYTYDAFKAYVPEMVEVLIDSVRNPAFFNWEIKEQLEKIK 191
>gi|307106061|gb|EFN54308.1| hypothetical protein CHLNCDRAFT_36005 [Chlorella variabilis]
Length = 499
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + N A + + G+ YETP N G +H+L A +T+ TH ++R V+
Sbjct: 81 NGATIATENTPGATATLGIYVDCGSVYETPANTGASHLLEYMAFKTTKNRTHLRLVREVE 140
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYD 269
GG++ A+ RE + Y I+ + I + L V +F+ WEV++ +++ D
Sbjct: 141 SIGGNVLASASREQMAYNIDTSKATIPEALEVLTDAVLNPKFQSWEVAEQVRKMEAD 197
>gi|168025570|ref|XP_001765307.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683626|gb|EDQ70035.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%)
Query: 150 TSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIR 209
T N V++ S N P + I + +G++ ETP G +H+L A ST +HF ++R
Sbjct: 89 TLTNGVRIASQNIAGPTSTIGIYVDSGSKNETPYCTGSSHLLERMAFKSTANRSHFRLVR 148
Query: 210 HVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLK 267
V+ GG++ A RE + YT +A++ + + + L V F WEV + ++K
Sbjct: 149 EVEAIGGNVVANASRELMCYTGDAIKTFMPEMVELLVDTVRNPLFNEWEVQEQLAKVK 206
>gi|413918166|gb|AFW58098.1| hypothetical protein ZEAMMB73_790961 [Zea mays]
Length = 834
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N VK+ S +SP A + + G+ ETP + G++H+L A ST TH ++R V+
Sbjct: 536 NGVKIASETSSSPAASVGLYIDCGSICETPASSGVSHLLERMAFKSTVNRTHLQLVREVE 595
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
GG++ A+ RE + YT +A++ + + L V F WEV
Sbjct: 596 AIGGNVSASASREQMSYTYDALKSYTPEMVEVLIDSVRNPAFLDWEV 642
>gi|402586294|gb|EJW80232.1| peptidase M16 inactive domain-containing protein, partial
[Wuchereria bancrofti]
Length = 308
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + V SV+ P+ ++ VA++AG RYE P+ G+ H +R+ G ++ + ++
Sbjct: 26 NGLTVASVDLGGPVTQLVVAYRAGTRYEMPNEAGLVHHIRNCIGGDSQRYYGAQLLWQCG 85
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
AG ++ + R+ + + +R V L + + F+PW+V D L+ DR
Sbjct: 86 SAGATVNGMMTRDLLAVQMSVIRDR-APVGLSLLGELAQPAFKPWDVEDFKETLRIDR 142
>gi|356547368|ref|XP_003542085.1| PREDICTED: mitochondrial-processing peptidase subunit alpha-like
[Glycine max]
Length = 491
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 58/109 (53%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +K+ S +P A I + G+ YETP + G + +L + ST +HF ++R V+
Sbjct: 69 NGLKIASETSPNPAASIGLYLDCGSLYETPLSSGASLLLEKMSFKSTANRSHFRVVREVE 128
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG++ A+ RE + YT +A++ + + + L V F WEV++
Sbjct: 129 AIGGNVGASASREQMGYTFDALKTYVPQMIELLIDCVRNPAFLDWEVNE 177
>gi|168002517|ref|XP_001753960.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694936|gb|EDQ81282.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 474
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 62/115 (53%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N V++ S N SPI+ + V +G+ +E+P+ G++H+L A ST +HF ++R V+
Sbjct: 54 NGVRIASENSHSPISTVGVYIDSGSVHESPNVAGVSHLLERMAFKSTSNRSHFRLVRDVE 113
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLK 267
GG + A RE + T ++++ + H+ + L V + EV D R+K
Sbjct: 114 AIGGHVMANASREQMSCTADSIKTYMPHMVELLVDCVRNSMCYNSEVHDQLVRVK 168
>gi|268577075|ref|XP_002643519.1| C. briggsae CBR-UCR-2.1 protein [Caenorhabditis briggsae]
Length = 410
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQA 214
++V SV + I +AF+AG+RY+ + G+TH++R++ G + ++ + Q
Sbjct: 34 LRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHLIRNSVGRDANNYPGLALVWNTAQN 93
Query: 215 GGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDRL 271
GG L A +R+ + VR + L +G F+PWEV D +K+D L
Sbjct: 94 GGQLTAVSNRDVFAIEVNVVRDQSPIALSLLGQ-LGNNAFKPWEVED----VKHDTL 145
>gi|15076515|dbj|BAB62405.1| mitochondrial processing peptidase alpha subunit [Morus alba]
Length = 506
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +K+ S +P A I + G+ YETP + G +H+L A +T +H ++R ++
Sbjct: 81 NGLKIASQTSVTPAASIGLYVDCGSIYETPVSFGASHLLERMAFKTTRNRSHLRVVREIE 140
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLK 267
GG + A+ RE + YT +A++ + + + L F WEV++ ++K
Sbjct: 141 AIGGHVQASASREQMGYTFDALKTHVPEMVELLVDCARNPVFLDWEVNEQLQKVK 195
>gi|198424486|ref|XP_002125685.1| PREDICTED: similar to Cytochrome b-c1 complex subunit 2,
mitochondrial precursor (Ubiquinol-cytochrome-c
reductase complex core protein 2) (Core protein II)
(Complex III subunit 2) [Ciona intestinalis]
Length = 448
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 9/149 (6%)
Query: 126 VSAKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARY-ETPDN 184
+++ +SF + A A S ++ N +KVV+ N+ + ARI++ K+G+R E+P
Sbjct: 12 INSAKSFFSSQAPAAQDSGSLKLSQLNNGLKVVTANQGAYGARIALLVKSGSRNDESP-- 69
Query: 185 LGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEA---VRKEIGHV 241
G+TH L++ AGL+ T F + + G L R+ I+Y + V K+I +
Sbjct: 70 -GLTHCLQATAGLTNNTNTAFLTTQLLSSLGAELEVIAGRDSILYQVGCHPNVAKDI--L 126
Query: 242 HKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
LA VV +++ WEV D+ R+KY +
Sbjct: 127 VDVLAPVVFGGKYQWWEVKDVAARMKYQK 155
>gi|17555260|ref|NP_497284.1| Protein UCR-2.3 [Caenorhabditis elegans]
gi|351062072|emb|CCD69955.1| Protein UCR-2.3 [Caenorhabditis elegans]
Length = 427
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +KVVS I+++ +AF+AG+RYE G+ H +R+ G + + ++
Sbjct: 28 NGLKVVSQENNGAISQLILAFRAGSRYEKVTQPGLVHHVRNFVGRDAQSYPGLQLVWSSA 87
Query: 213 QAGGSL--YATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYD 269
+G +L +AT D G+ I R + + L V K F+PWE+ D+TP + D
Sbjct: 88 ASGANLNSFATRDIFGV--QISVARDQAAYALSILGHVAAKPAFKPWELEDVTPTILAD 144
>gi|164656755|ref|XP_001729505.1| hypothetical protein MGL_3540 [Malassezia globosa CBS 7966]
gi|159103396|gb|EDP42291.1| hypothetical protein MGL_3540 [Malassezia globosa CBS 7966]
Length = 406
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 161 NETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYA 220
NE +P+A ++VA +AG R+E+ G+ H L++ A ST++ + I+R + GG L A
Sbjct: 10 NEGAPVASVTVAVRAGPRFES--EAGVAHALKNFAFRSTKDRSALRIVRETELNGGVLSA 67
Query: 221 TVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVS-DLTPRLKYD 269
++ RE ++ T E ++ + H + LA+VVG ++ E + D+ P + D
Sbjct: 68 SLSREHLLLTAEFLKGDEAHFIELLANVVGNGKYCRHEFNEDVIPSMVAD 117
>gi|449533403|ref|XP_004173665.1| PREDICTED: LOW QUALITY PROTEIN: mitochondrial-processing peptidase
subunit alpha-like, partial [Cucumis sativus]
Length = 300
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +KV P A IS+ G+ YETP+ G TH+L +T +H ++R V+
Sbjct: 53 NGIKVAXETSLDPTASISLYVDCGSSYETPETFGSTHMLERMTFKTTSNRSHLHVVREVE 112
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLK 267
GG++ + RE + YT A++ + + + + + F WEV++ R+K
Sbjct: 113 AIGGTVLTSAAREQMGYTFNALKSYVPKMVELVIHCIRNPVFLDWEVNEQLSRVK 167
>gi|14334534|gb|AAK59675.1| putative mitochondrial processing peptidase alpha subunit
[Arabidopsis thaliana]
Length = 499
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%)
Query: 146 IQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHF 205
+++ T N + + + +P A I + G+ YETP G TH+L A ST +HF
Sbjct: 74 LKTTTLPNGLTIATEMSPNPAASIGLYVDCGSIYETPQFRGATHLLERMAFKSTLNRSHF 133
Query: 206 GIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
++R ++ GG+ A+ RE + YTI+A++ + + + L V F WEV++
Sbjct: 134 RLVREIEAIGGNTSASASREQMGYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVNE 189
>gi|308487973|ref|XP_003106181.1| hypothetical protein CRE_15338 [Caenorhabditis remanei]
gi|308254171|gb|EFO98123.1| hypothetical protein CRE_15338 [Caenorhabditis remanei]
Length = 199
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 4/119 (3%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFG--IIRH 210
N + V +++ P+ ++ +AF+AG+RYE + G++H +R+ G ++ HFG I+
Sbjct: 33 NGLTVGTIDSKKPLTQLVLAFRAGSRYEQANQAGLSHTIRNFVGRDSKN--HFGTAIVWS 90
Query: 211 VQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYD 269
GG + + R+ ++ R + LA F+PWEV+D+ P ++ D
Sbjct: 91 AANYGGVVKSFTSRDLFGVSLTVPRDSTSYALHVLAQAAANPGFKPWEVADVLPTMRAD 149
>gi|18401141|ref|NP_566548.1| mitochondrial processing peptidase [Arabidopsis thaliana]
gi|29839443|sp|O04308.1|MPPA2_ARATH RecName: Full=Probable mitochondrial-processing peptidase subunit
alpha-2; AltName: Full=Alpha-MPP 2; Flags: Precursor
gi|2062155|gb|AAB63629.1| mitochondrial processing peptidase alpha subunit precusor isolog
[Arabidopsis thaliana]
gi|9279647|dbj|BAB01147.1| mitochondrial processing peptidase alpha subunit [Arabidopsis
thaliana]
gi|23297133|gb|AAN13101.1| putative mitochondrial processing peptidase alpha subunit
[Arabidopsis thaliana]
gi|332642304|gb|AEE75825.1| mitochondrial processing peptidase [Arabidopsis thaliana]
Length = 499
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%)
Query: 146 IQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHF 205
+++ T N + + + +P A I + G+ YETP G TH+L A ST +HF
Sbjct: 74 LKTTTLPNGLTIATEMSPNPAASIGLYVDCGSIYETPQFRGATHLLERMAFKSTLNRSHF 133
Query: 206 GIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
++R ++ GG+ A+ RE + YTI+A++ + + + L V F WEV++
Sbjct: 134 RLVREIEAIGGNTSASASREQMGYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVNE 189
>gi|168049811|ref|XP_001777355.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671331|gb|EDQ57885.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%)
Query: 145 DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTH 204
D + T N +++ S N P A +++ +G++ ETP G +H+L A ST +H
Sbjct: 84 DTKVTTLANGLRIASENVPGPTATVAIHIDSGSKNETPFCTGASHLLERMAFKSTVNRSH 143
Query: 205 FGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTP 264
F +IR V+ G +L +T +E + Y+ +A++ + + + L V F WEV +
Sbjct: 144 FRLIREVEAIGANLMSTSAQEQMCYSADAIKTFLPEMVEILVDSVRNPLFNEWEVQEQLA 203
Query: 265 RLK 267
+LK
Sbjct: 204 KLK 206
>gi|195999330|ref|XP_002109533.1| hypothetical protein TRIADDRAFT_53663 [Trichoplax adhaerens]
gi|190587657|gb|EDV27699.1| hypothetical protein TRIADDRAFT_53663 [Trichoplax adhaerens]
Length = 555
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 58/109 (53%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + V S+ + S RI++ AG+RYE + LG +HV++ A L+ +E + I R +
Sbjct: 114 NGMTVASIEDYSSTTRIALYVNAGSRYERFNTLGASHVMKICAFLANKENSALKITREAE 173
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
G +L A RE ++ + + +R + V +AS V F WEV+D
Sbjct: 174 LLGANLQAKNTREHLIISSDFLRDRVQPVLSIIASTVKDPCFYRWEVND 222
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 67 GIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTTGVVKSLPDLLAEVEAVSSSDV 126
GI + ++ R K LK + A S+E S + + QA TG KS D+L EV+ S DV
Sbjct: 470 GISNDELTRAKNQLKAYAAMSYENPASIMQDLAVQAGYTGSYKSPVDVLNEVDKASVEDV 529
Query: 127 --SAKRSFAA 134
AKR F+A
Sbjct: 530 VKVAKRLFSA 539
>gi|449462399|ref|XP_004148928.1| PREDICTED: LOW QUALITY PROTEIN: mitochondrial-processing peptidase
subunit alpha-like [Cucumis sativus]
Length = 529
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +KV P A IS+ G+ YETP+ G TH+L +T +H ++R V+
Sbjct: 53 NGIKVAXETSLDPTASISLYVDCGSSYETPETFGSTHMLERMTFKTTSNRSHLRVVREVE 112
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLK 267
GG++ + RE + YT A++ + + + + + F WEV++ R+K
Sbjct: 113 AIGGTVLTSAAREQMGYTFNALKSYVPKMVELVIHCIRNPVFLDWEVNEQLSRVK 167
>gi|222632285|gb|EEE64417.1| hypothetical protein OsJ_19261 [Oryza sativa Japonica Group]
Length = 495
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 153 NKVKVVSVNETSPIARISVAF--KAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRH 210
N +K+ S ETSPI +SV G+ YET + G +H+L A ST +H ++R
Sbjct: 73 NGIKIAS--ETSPIPAVSVGLYIDCGSVYETSSSSGTSHLLERMAFKSTTNRSHLRLVRE 130
Query: 211 VQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLK 267
V+ GG+++A+ RE + YT +A++ + + L V F WEV + ++K
Sbjct: 131 VEAIGGNVFASASREQMSYTYDALKCYAPEMVEVLIDSVRNPAFLEWEVKEQLQKIK 187
>gi|168013815|ref|XP_001759462.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689392|gb|EDQ75764.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%)
Query: 150 TSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIR 209
T N VK+ S P + I + +G++ ETP G +H+L A ST +HF ++R
Sbjct: 89 TLANGVKIASEMIAGPTSTIGIFIDSGSKNETPYCTGASHLLERMAFKSTANRSHFRLVR 148
Query: 210 HVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
V+ GG++ A RE + YT + ++ + + + L V F WEV +
Sbjct: 149 EVEAIGGNVMANASREQMCYTGDTIKTFMPEMVELLVDTVRNPLFNEWEVQE 200
>gi|115464979|ref|NP_001056089.1| Os05g0524300 [Oryza sativa Japonica Group]
gi|113579640|dbj|BAF18003.1| Os05g0524300, partial [Oryza sativa Japonica Group]
Length = 494
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 153 NKVKVVSVNETSPIARISVAF--KAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRH 210
N +K+ S ETSPI +SV G+ YET + G +H+L A ST +H ++R
Sbjct: 72 NGIKIAS--ETSPIPAVSVGLYIDCGSVYETSSSSGTSHLLERMAFKSTTNRSHLRLVRE 129
Query: 211 VQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLK 267
V+ GG+++A+ RE + YT +A++ + + L V F WEV + ++K
Sbjct: 130 VEAIGGNVFASASREQMSYTYDALKCYAPEMVEVLIDSVRNPAFLEWEVKEQLQKIK 186
>gi|115435028|ref|NP_001042272.1| Os01g0191500 [Oryza sativa Japonica Group]
gi|55771316|dbj|BAD72225.1| putative mitochondrial processing peptidase [Oryza sativa Japonica
Group]
gi|113531803|dbj|BAF04186.1| Os01g0191500 [Oryza sativa Japonica Group]
gi|125569350|gb|EAZ10865.1| hypothetical protein OsJ_00704 [Oryza sativa Japonica Group]
gi|215701335|dbj|BAG92759.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 505
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N VK+ S P + V G+ +E P+ LG T +L+ A +T +H ++R ++
Sbjct: 84 NGVKIASETTPGPSCSVGVYVNCGSVHEAPETLGATQLLKKMAYTTTTNRSHLRVVREIE 143
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLK 267
GG++ A+ +RE + Y+ A++ + + + L V F WEV + +LK
Sbjct: 144 AVGGNVKASANREMMSYSYAALKTYMPEMVEVLIDCVRNPAFLDWEVKEQIMKLK 198
>gi|125524744|gb|EAY72858.1| hypothetical protein OsI_00727 [Oryza sativa Indica Group]
Length = 505
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N VK+ S P + V G+ +E P+ LG T +L+ A +T +H ++R ++
Sbjct: 84 NGVKIASETTPGPSCSVGVYVNCGSVHEAPETLGATQLLKKMAFTTTTNRSHLRVVREIE 143
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLK 267
GG++ A+ +RE + Y+ A++ + + + L V F WEV + +LK
Sbjct: 144 AVGGNVKASANREMMSYSYAALKTYMPEMVEVLIDCVRNPAFLDWEVKEQIMKLK 198
>gi|159465665|ref|XP_001691043.1| mitochondrial processing peptidase alpha subunit [Chlamydomonas
reinhardtii]
gi|158279729|gb|EDP05489.1| mitochondrial processing peptidase alpha subunit [Chlamydomonas
reinhardtii]
Length = 485
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 136 PATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAA 195
PATK P +Q+ + + VKV S+N SPI+ + + + GA ETP G + VL AA
Sbjct: 69 PATK----PIVQTSSLRSGVKVASINTVSPISSLVLFVEGGAAAETPATAGASKVLEVAA 124
Query: 196 GLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFR 255
+T + F + R +++ G + +A R+ + + ++A R + LA V +
Sbjct: 125 FKATANRSTFRLTRELEKIGATSFARAGRDHVAFGVDATRLNQLEALEILADAVVNARYT 184
Query: 256 PWEVSD 261
WEV D
Sbjct: 185 YWEVRD 190
>gi|401406031|ref|XP_003882465.1| hypothetical protein NCLIV_022220 [Neospora caninum Liverpool]
gi|325116880|emb|CBZ52433.1| hypothetical protein NCLIV_022220 [Neospora caninum Liverpool]
Length = 574
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 58/115 (50%)
Query: 145 DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTH 204
+IQ N +++ S++ A + + AG+R+E N G+TH++++ A ST +H
Sbjct: 141 NIQYSKLDNGLRIASMDRGGLTASLGLFVHAGSRFEDVTNFGVTHMIQNLAFASTAHLSH 200
Query: 205 FGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
++ ++ G + V RE +VY+ E +R + + L V F PWE+
Sbjct: 201 LRTVKTIEVLGANAGCVVGREHVVYSAECLRSHMPLLVPMLTGNVLFPRFLPWEL 255
>gi|170588279|ref|XP_001898901.1| Peptidase M16 inactive domain containing protein [Brugia malayi]
gi|158593114|gb|EDP31709.1| Peptidase M16 inactive domain containing protein [Brugia malayi]
Length = 462
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + V SV+ P+ ++ VA++AG RYE P+ G+ H +R+ G ++ + ++
Sbjct: 36 NGLTVASVDLGGPVTQLVVAYRAGTRYEMPNEAGLVHHIRNCIGGDSQRYYGAQLLWQCG 95
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR 270
AG ++ + R+ + + +R V L + + F+PW+V L+ DR
Sbjct: 96 SAGATVNGMMTRDLLAVQMSVIRDR-APVGLSLLGELAQPAFKPWDVEHCNATLRIDR 152
>gi|308507021|ref|XP_003115693.1| CRE-UCR-2.3 protein [Caenorhabditis remanei]
gi|308256228|gb|EFP00181.1| CRE-UCR-2.3 protein [Caenorhabditis remanei]
Length = 429
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 56/117 (47%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + VV+ + ++++ +AF+AGARY++ G+ H +R+ G + + ++
Sbjct: 28 NGLTVVAQDNNGAVSQLILAFRAGARYQSVTQQGLVHHIRNFVGRDAQSYPGLQLVWSSA 87
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYD 269
+G + + R+ I R + + L V K F+PWE D+ P ++ D
Sbjct: 88 ASGAQMNSFASRDIFGVQISVARDDAAYALSILGHVASKPAFKPWETEDVLPTIRAD 144
>gi|384487470|gb|EIE79650.1| hypothetical protein RO3G_04355 [Rhizopus delemar RA 99-880]
Length = 431
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%)
Query: 146 IQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHF 205
IQ ++ N VKV S E A ++V G R E+ N+G++H L++ + T F
Sbjct: 27 IQVSSASNGVKVASSQEPGQTASLAVVVNGGTRVESGKNVGVSHFLKNYGFRNNANRTSF 86
Query: 206 GIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDL 262
++R + AGG L A + RE +VY E ++ + + L+ V+ K +++ E D+
Sbjct: 87 RVVREAELAGGVLSADLSRESLVYAAEFLKGDAELFAEILSDVITKQKYQEHEFLDV 143
>gi|389584103|dbj|GAB66836.1| mitochondrial processing peptidase alpha subunit [Plasmodium
cynomolgi strain B]
Length = 534
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNL----GITHVLRSAAGLSTEEFTHFGII 208
N ++++S N+ + + I + K G+RYE ++ G++ +L + A ST +H I
Sbjct: 110 NDLRIISTNKNNSVCSIGLYVKCGSRYEEINDQVNEQGMSVMLENMAFHSTAHLSHLRTI 169
Query: 209 RHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKY 268
+ +++ G ++ RE IVYT E +++ + V L V F WE+ + RL
Sbjct: 170 KSLEKIGANVSCNAFREHIVYTCECLKEYLPVVTNLLIGNVLFPRFLSWEMKNNVNRLNT 229
Query: 269 DRLTRPSQGNE 279
R T+ + NE
Sbjct: 230 MR-TKLFENNE 239
>gi|302811813|ref|XP_002987595.1| hypothetical protein SELMODRAFT_183257 [Selaginella moellendorffii]
gi|300144749|gb|EFJ11431.1| hypothetical protein SELMODRAFT_183257 [Selaginella moellendorffii]
Length = 506
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 7/157 (4%)
Query: 111 LPDLLAEVEAVSSSDVSAKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARIS 170
LP L A EA+ ++ +P+ + S + N V++ S P A +
Sbjct: 50 LPTLPALYEALPEVNLPPSLEDTVEPSGTQISSLN-------NGVRIASEQIAGPTATLG 102
Query: 171 VAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYT 230
+ +G+ +E N G TH+L A ST +HF + R V+ GG++ A+ RE + YT
Sbjct: 103 IYVDSGSIHEDASNSGATHLLERMAFKSTHNRSHFRLTREVEAIGGNIMASATREQMAYT 162
Query: 231 IEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLK 267
+ ++ + + + L V F WEV + ++K
Sbjct: 163 GDTIKTYMPQMVELLVDSVRNPAFHGWEVHEQVDKIK 199
>gi|156095384|ref|XP_001613727.1| mitochondrial processing peptidase alpha subunit [Plasmodium vivax
Sal-1]
gi|148802601|gb|EDL44000.1| mitochondrial processing peptidase alpha subunit, putative
[Plasmodium vivax]
Length = 534
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 5/131 (3%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYE----TPDNLGITHVLRSAAGLSTEEFTHFGII 208
N ++++S N+ + + I + K G+RYE + G++ +L + A ST +H I
Sbjct: 110 NDLRIISTNKNNSVCSIGLYVKCGSRYEEISEQVNEQGMSVMLENMAFHSTAHLSHLRTI 169
Query: 209 RHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKY 268
+ +++ G ++ RE IVYT E +++ + V L V F WE+ + RL
Sbjct: 170 KSLEKIGANVSCNAFREHIVYTCECLKEYLPVVTNLLIGNVLFPRFLSWEMKNNVNRLNT 229
Query: 269 DRLTRPSQGNE 279
R T+ + NE
Sbjct: 230 MR-TKLFENNE 239
>gi|302833467|ref|XP_002948297.1| hypothetical protein VOLCADRAFT_80074 [Volvox carteri f.
nagariensis]
gi|300266517|gb|EFJ50704.1| hypothetical protein VOLCADRAFT_80074 [Volvox carteri f.
nagariensis]
Length = 484
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 136 PATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAA 195
PATK P +Q+ + + VKV ++ SP++ + + + G+ ETP G + VL AA
Sbjct: 67 PATK----PTLQTSSLSSGVKVATIETVSPVSSLVLFVEGGSSAETPSTAGASKVLEIAA 122
Query: 196 GLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFR 255
+T + F + R +++ G + Y RE + + ++AVR + L V +
Sbjct: 123 FKATTNRSTFRLTRELEKIGATAYCRAGREHVAFGVDAVRVNTREALEILTDAVLNARYP 182
Query: 256 PWEVSDLTPRLK 267
WEV D LK
Sbjct: 183 YWEVRDSLDTLK 194
>gi|328862331|gb|EGG11432.1| hypothetical protein MELLADRAFT_41910 [Melampsora larici-populina
98AG31]
Length = 442
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 4/141 (2%)
Query: 123 SSDVSAKRSFAAQPATKALFSP-DIQSGTSYNKVKVVSVNETSPI-ARISVAFKAGARYE 180
+S S RS AT + SP I S + N +KV+S ++ S + A ISV KAG+R++
Sbjct: 5 TSPASLLRSITRTYATHSTLSPTSISSHQTSNGLKVLSTSDQSKLTASISVFIKAGSRHQ 64
Query: 181 TPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGH 240
T G++HVL++ ST++ + ++R + GG L +T+ RE ++ E ++
Sbjct: 65 TLP--GLSHVLKNLVFKSTQKRSALSVVREAELLGGVLTSTLTREHLILNAEFIKGNEAF 122
Query: 241 VHKFLASVVGKTEFRPWEVSD 261
+ L V+ ++F P E ++
Sbjct: 123 FAELLGDVLTCSKFLPHEFNE 143
>gi|302811940|ref|XP_002987658.1| hypothetical protein SELMODRAFT_126515 [Selaginella moellendorffii]
gi|300144550|gb|EFJ11233.1| hypothetical protein SELMODRAFT_126515 [Selaginella moellendorffii]
Length = 495
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 7/157 (4%)
Query: 111 LPDLLAEVEAVSSSDVSAKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARIS 170
LP L A EA+ ++ +P+ + S + N V++ S P A +
Sbjct: 40 LPTLPALYEALPEVNLPPSLEDTVEPSGTQISSLN-------NGVRIASEQIAGPTATLG 92
Query: 171 VAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYT 230
+ +G+ +E N G TH+L A ST +HF + R V+ GG++ A+ RE + YT
Sbjct: 93 IYVDSGSIHEDASNSGATHLLERMAFKSTHNRSHFRLTREVEAIGGNIMASATREQMAYT 152
Query: 231 IEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLK 267
+ ++ + + + L V F WEV + ++K
Sbjct: 153 GDTIKTYMPQMVELLVDSVRNPAFHGWEVHEQVDKIK 189
>gi|444316396|ref|XP_004178855.1| hypothetical protein TBLA_0B05010 [Tetrapisispora blattae CBS 6284]
gi|387511895|emb|CCH59336.1| hypothetical protein TBLA_0B05010 [Tetrapisispora blattae CBS 6284]
Length = 379
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 5/115 (4%)
Query: 147 QSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFG 206
QS YN V +V+ S ++ ++V + G+RY D G++H+L T E +
Sbjct: 13 QSARFYN---VSAVDTPSAVSSLAVRVRGGSRYSDKD--GVSHLLSRFNYQDTAEKSSLR 67
Query: 207 IIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
++R + GG L +TVDRE I + + +++++ + + + +V+ KT F WE+++
Sbjct: 68 LVRESELLGGKLQSTVDREYITLSAQFLKQDLPYFVEAIGNVLSKTSFNKWELTE 122
>gi|148685265|gb|EDL17212.1| ubiquinol cytochrome c reductase core protein 2, isoform CRA_b [Mus
musculus]
Length = 403
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 198 STEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPW 257
+T+ + F I R ++ GG L T RE + YT+E +R +I + +FL +V EFR W
Sbjct: 40 TTKGASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRSDIEILMEFLLNVTTAPEFRRW 99
Query: 258 EVSDLTPRLKYDR 270
EV+ L +LK D+
Sbjct: 100 EVAALRSQLKIDK 112
>gi|149068067|gb|EDM17619.1| ubiquinol cytochrome c reductase core protein 2, isoform CRA_d
[Rattus norvegicus]
Length = 402
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 198 STEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPW 257
+T+ + F I R ++ GG L T RE + YT+E +R +I + +FL +V EFR W
Sbjct: 39 TTKGASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRDDIEILMEFLLNVTTAPEFRRW 98
Query: 258 EVSDLTPRLKYDR 270
EV+ L +LK D+
Sbjct: 99 EVAALRSQLKIDK 111
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 21/143 (14%)
Query: 5 EALAFAVLKYALGAGP-AKTGKNQRSTNSKGLSR--------TPGRESLDESHHFSPPQA 55
EA AF+VL++ LGAGP K G N S S+ +++ + S +S F
Sbjct: 231 EANAFSVLQHLLGAGPHIKRGNNTTSLLSQSVAKGSQQPFDVSAFNASYSDSGLFGIYTV 290
Query: 56 LQASI--DVVRGA----------GIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAV 103
QA+ DV+ A + AD+ K LK S ET + + + QA+
Sbjct: 291 SQAAAAGDVINAAYNQVKAVAQGNLSSADVQAAKNKLKAGYLMSVETSEGFLSEIGSQAL 350
Query: 104 TTGVVKSLPDLLAEVEAVSSSDV 126
TG P +L +++AV+ +DV
Sbjct: 351 ATGSYMPPPTVLQQIDAVADADV 373
>gi|126139245|ref|XP_001386145.1| Mitochondrial processing peptidase alpha subunit, mitochondrial
precursor (Alpha-MPP) [Scheffersomyces stipitis CBS
6054]
gi|126093427|gb|ABN68116.1| Mitochondrial processing peptidase alpha subunit, mitochondrial
precursor (Alpha-MPP) [Scheffersomyces stipitis CBS
6054]
Length = 496
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 72/142 (50%), Gaps = 6/142 (4%)
Query: 128 AKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGI 187
A+R+F A ATK P+I++ T N +++V+ + + + AG+R+E P+ G+
Sbjct: 7 ARRAFTA--ATK----PNIETSTLSNGLRLVTDSTPGHFSALGAYVDAGSRFENPNKPGL 60
Query: 188 THVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLAS 247
+H+ A STE+++ +I ++ + GG+ + RE ++Y K++ + +A
Sbjct: 61 SHICDRLAWKSTEKYSGMELIENLAKLGGNYMCSAQRESVIYQASVFNKDVEKMFDCIAQ 120
Query: 248 VVGKTEFRPWEVSDLTPRLKYD 269
V F E+ + +Y+
Sbjct: 121 TVRAPRFTDQELFETLQTAEYE 142
>gi|83314632|ref|XP_730445.1| mitochondrial processing peptidase subunit alpha homolog
[Plasmodium yoelii yoelii 17XNL]
gi|23490168|gb|EAA22010.1| mitochondrial processing peptidase alpha subunit homolog
[Plasmodium yoelii yoelii]
Length = 534
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDN----LGITHVLRSAAGLSTEEFTHFGII 208
N +K++S N+ S + I + K G+RYE ++ G++ ++ + A ST +H I
Sbjct: 110 NDLKIISTNKNSGVCSIGLYIKCGSRYEEINDKVNEQGMSVMIENMAFHSTAHLSHLRAI 169
Query: 209 RHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRL 266
+ +++ G ++ RE IVYT E + + + V L V F WE+ + RL
Sbjct: 170 KSLEKIGANVSCNAFREHIVYTCECLNEYLPVVINLLIGNVLFPRFLSWEMKNNVNRL 227
>gi|221056885|ref|XP_002259580.1| mitochondrial processing peptidase alpha subunit [Plasmodium
knowlesi strain H]
gi|193809652|emb|CAQ40353.1| mitochondrial processing peptidase alpha subunit, putative
[Plasmodium knowlesi strain H]
Length = 535
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 5/131 (3%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNL----GITHVLRSAAGLSTEEFTHFGII 208
N ++++S N + + I + K G+RYE ++ G++ +L + A ST +H I
Sbjct: 111 NDLRIISTNRNNSVCSIGLYVKCGSRYEEINDQVNEQGMSVMLENMAFHSTAHLSHLRTI 170
Query: 209 RHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKY 268
+ +++ G ++ RE IVYT E +++ + V L V F WE+ + RL
Sbjct: 171 KSLEKIGANVSCNAFREHIVYTCECLKEYLPVVTNLLIGNVLFPRFLSWEMKNNVNRLNT 230
Query: 269 DRLTRPSQGNE 279
R ++ + NE
Sbjct: 231 MR-SKLFENNE 240
>gi|345560341|gb|EGX43466.1| hypothetical protein AOL_s00215g202 [Arthrobotrys oligospora ATCC
24927]
Length = 450
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 7/140 (5%)
Query: 122 SSSDVSAKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYET 181
SS + R+FA+ + + +GT K VS + SP + ++V KAG+RY+
Sbjct: 20 SSLSLQQSRAFASPASAPFTYEVSEAAGT-----KTVSKDTGSPTSSLAVVIKAGSRYQP 74
Query: 182 PDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHV 241
G++H L A ST + + I R V+ GG L ++ RE IVY +R ++ +
Sbjct: 75 LP--GLSHALEHFAFKSTLKRSSLFITREVELMGGVLETSLSRENIVYKARFLRGDLPYF 132
Query: 242 HKFLASVVGKTEFRPWEVSD 261
+ L VV KT+ P+E ++
Sbjct: 133 AELLGDVVTKTKLIPYEYTE 152
>gi|268561648|ref|XP_002638380.1| C. briggsae CBR-UCR-2.3 protein [Caenorhabditis briggsae]
Length = 440
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + VV+ + ++++ +AF+AG+RY++ G+ H +R+ G + + ++
Sbjct: 30 NGLTVVAQDNNGAVSQLILAFRAGSRYQSVTQQGLVHHIRNFVGRDAQSYPGLQLVWQTG 89
Query: 213 QAGGSL---------YATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLT 263
GG + +A+ D G+ I R+E + L V K F+PWE+ D+
Sbjct: 90 VVGGQMARKSGFQTSFASRDIFGV--QISVPREESAYALSILGHVASKPAFKPWEIEDVL 147
Query: 264 PRLKYD 269
P ++ D
Sbjct: 148 PTIRAD 153
>gi|68076007|ref|XP_679923.1| mitochondrial processing peptidase alpha subunit, [Plasmodium
berghei strain ANKA]
gi|56500772|emb|CAH96726.1| mitochondrial processing peptidase alpha subunit, putative
[Plasmodium berghei]
Length = 534
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDN----LGITHVLRSAAGLSTEEFTHFGII 208
N +K++S N+ S + I + K G+RYE ++ G++ ++ + A ST +H I
Sbjct: 110 NDLKIISTNKNSGVCSIGLYIKCGSRYEEINDKINEQGMSVMIENMAFHSTAHLSHLRAI 169
Query: 209 RHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRL 266
+ +++ G ++ RE IVYT E + + + V L V F WE+ + RL
Sbjct: 170 KSLEKIGANVSCNAFREHIVYTCECLNEYLPIVINLLIGNVLFPRFLSWEMKNNVNRL 227
>gi|405119672|gb|AFR94444.1| ubiquinol-cytochrome C reductase complex core protein 2
[Cryptococcus neoformans var. grubii H99]
Length = 434
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 148 SGTSYNKVKVVSVNETSPIA--RISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHF 205
S TS V VV P A ++VA KAG+RYET G+ HVL+S A +T +
Sbjct: 25 STTSAGGVNVVGFENKGPAATSSLTVAIKAGSRYETTP--GVAHVLKSFAYKATASASAL 82
Query: 206 GIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDL 262
R + GG L A + RE ++ + E +R + H LASV+ ++F E+S+L
Sbjct: 83 RTAREAELYGGVLSAALTREHLLLSAEFLRGDEEHFLNVLASVLSSSQFYRHELSEL 139
>gi|294933914|ref|XP_002780898.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239891045|gb|EER12693.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 551
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 59/117 (50%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+++ N +++VSV++ + + + AG+R+ETP G++H++ A ST +
Sbjct: 114 PEMKFSVLENGMRIVSVDKQGLTSNLGLFVHAGSRFETPAEEGLSHMVECVAFRSTAHLS 173
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVS 260
H I+ ++ G + RE I+Y +E +R+ + + V PWEV+
Sbjct: 174 HLRTIKTIEVLGMNGGCQAGREHIMYNLELLREYMPVASTLVVGNVLFPRLLPWEVN 230
>gi|294952458|ref|XP_002787314.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239902257|gb|EER19110.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 546
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 59/117 (50%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+++ N +++VSV++ + + + AG+R+ETP G++H++ A ST +
Sbjct: 109 PEMKFSVLENGMRIVSVDKQGLTSNLGLFVHAGSRFETPAEEGLSHMVECVAFRSTAHLS 168
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVS 260
H I+ ++ G + RE I+Y +E +R+ + + V PWEV+
Sbjct: 169 HLRTIKTIEVLGMNGGCQAGREHIMYNLELLREYMPVASTLVVGNVLFPRLLPWEVN 225
>gi|119570976|gb|EAW50591.1| ubiquinol-cytochrome c reductase core protein II, isoform CRA_b
[Homo sapiens]
Length = 132
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ SP++RI + KAG+RYE NLG TH+LR + L+T+ + F I R ++
Sbjct: 45 NGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTHLLRLTSSLTTKGASSFKITRGIE 104
Query: 213 QAGG--SLYATVDREGIV 228
GG S+++ ++E I+
Sbjct: 105 AVGGKLSVHSIFNQEQIL 122
>gi|290973053|ref|XP_002669264.1| mitochondrial processing peptidase beta subunit [Naegleria gruberi]
gi|284082809|gb|EFC36520.1| mitochondrial processing peptidase beta subunit [Naegleria gruberi]
Length = 483
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 147 QSGTSYNKVKVVSVNETS-PIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHF 205
Q+ T N + VVS + TS ++ +S+ AG+R+ET G++H + ST +
Sbjct: 66 QTSTLPNGLNVVSTDSTSRGVSVVSLFVNAGSRFETYRTSGVSHFVEKFFFSSTNNRSLL 125
Query: 206 GIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPR 265
+ +Q+ G S+ A RE IVY EA+R+ + V + +A+ V + PW DL P+
Sbjct: 126 RLTSELQKTGASVSAQTGREHIVYQAEALRESVPLVVELMANSVLQGRLHPW---DLEPK 182
>gi|70950759|ref|XP_744676.1| mitochondrial processing peptidase alpha subunit, [Plasmodium
chabaudi chabaudi]
gi|56524726|emb|CAH88238.1| mitochondrial processing peptidase alpha subunit, putative
[Plasmodium chabaudi chabaudi]
Length = 534
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYE-TPDNL---GITHVLRSAAGLSTEEFTHFGII 208
N +K++S N+ S + I + K G+RYE D + G++ ++ + A ST +H I
Sbjct: 110 NDLKIISTNKNSGVCSIGLYIKCGSRYEEISDKINEQGMSVMIENMAFHSTAHLSHLRAI 169
Query: 209 RHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRL 266
+ +++ G ++ RE IVYT E + + + V L V F WE+ + RL
Sbjct: 170 KSLEKIGANVSCNAFREHIVYTCECLNEYLPVVINLLIGNVLFPRFLSWEMKNNVNRL 227
>gi|195590853|ref|XP_002085159.1| GD14647 [Drosophila simulans]
gi|194197168|gb|EDX10744.1| GD14647 [Drosophila simulans]
Length = 407
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
NK+ V + + T P++R+S+ AG+R E+ D G +H+LR A GLST+ + F I R++Q
Sbjct: 39 NKLVVATADATLPVSRVSLVLGAGSRNESYDIQGASHLLRLAGGLSTQNSSAFAIARNIQ 98
Query: 213 Q 213
Q
Sbjct: 99 Q 99
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 19/141 (13%)
Query: 4 KEALAFAVLKYALGAGPA-----KTGKNQRSTNSKGLSRTPGRESLDESHHFSPPQALQA 58
KEALAFA+L+ ALGA A G + N G ++++ S+ +
Sbjct: 238 KEALAFAILEQALGAKAATKRGTSAGLFGEAVNCAG-GVGASVKAVNASYSDAGLFGFVV 296
Query: 59 SID----------VVRG---AGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTT 105
S D +VRG A + D D+ARGKALLK + + + + + RQA T
Sbjct: 297 SADSKDIGKTVEFLVRGLKSASVSDKDVARGKALLKARIISRYSSDGGLIKEIGRQAALT 356
Query: 106 GVVKSLPDLLAEVEAVSSSDV 126
V LL ++ +S S V
Sbjct: 357 RNVLEADALLGAIDGISQSQV 377
>gi|226500892|ref|NP_001150614.1| mitochondrial-processing peptidase alpha subunit [Zea mays]
gi|195640588|gb|ACG39762.1| mitochondrial-processing peptidase alpha subunit [Zea mays]
Length = 505
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 12/201 (5%)
Query: 73 IARGKALLKRHLADSFETLDSTVDSVVRQAVTTGVVKSLPDLLAEVEAVSSSDVSAKRSF 132
+A G LKRH A++ +++ +R A T+ +S L + S+++ F
Sbjct: 4 VASGLGALKRHGANA-----QMMNAAIRCASTSVAQRSSGGLWTWLTGARSNEIPPP-DF 57
Query: 133 AAQPATKALFSPD-IQSG-----TSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLG 186
T PD +++G T N VK+ S + V G+ YE P+ G
Sbjct: 58 TLPGVTIPPPLPDHVEAGKTRVTTLPNGVKIASETSAGSSCSVGVYVDCGSVYEAPETTG 117
Query: 187 ITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLA 246
+ +L++ A +T + ++R ++ GGS A+ RE + YT A++ + + + L
Sbjct: 118 ASQLLKTMAFTTTANRSELRVVREIEAIGGSAKASASREMMSYTYGALKTYMPEMVEVLI 177
Query: 247 SVVGKTEFRPWEVSDLTPRLK 267
V F WEV + RL+
Sbjct: 178 DCVRNPAFLDWEVKEQILRLQ 198
>gi|357126055|ref|XP_003564704.1| PREDICTED: mitochondrial-processing peptidase subunit alpha-like
[Brachypodium distachyon]
Length = 505
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 153 NKVKVVSVNETSP--IARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRH 210
N VK+ S ETSP + V G+ YE P+ LG T +L+ A +T +H ++R
Sbjct: 84 NGVKIAS--ETSPGSTCSVGVYVNCGSVYEAPETLGATQLLKKLAFTTTTNRSHLRVVRE 141
Query: 211 VQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLK 267
+ GG A+ +RE + Y+ A++ + + + L V WEV + +LK
Sbjct: 142 IDAVGGKASASANREMMSYSYAALKTYMPEMVEVLVDSVRNPALLDWEVKEQIMKLK 198
>gi|58261174|ref|XP_567997.1| ubiquinol-cytochrome C reductase complex core protein 2 precursor
[Cryptococcus neoformans var. neoformans JEC21]
gi|134115819|ref|XP_773623.1| hypothetical protein CNBI2370 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256249|gb|EAL18976.1| hypothetical protein CNBI2370 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230079|gb|AAW46480.1| ubiquinol-cytochrome C reductase complex core protein 2 precursor,
putative [Cryptococcus neoformans var. neoformans JEC21]
Length = 466
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 148 SGTSYNKVKVVSVNETSPIA--RISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHF 205
S TS V VV P A ++VA KAG+RYET G+ HVL+S A +T +
Sbjct: 57 STTSAGGVNVVGFENKGPAATSSLTVAIKAGSRYETTP--GVAHVLKSFAYKATASASAL 114
Query: 206 GIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDL 262
R + GG L A + RE ++ + E +R + H LASV+ ++F E+++L
Sbjct: 115 RTAREAELYGGVLSAALTREHLLLSAEFLRGDEEHFLNVLASVLSSSQFYQHELNEL 171
>gi|156088219|ref|XP_001611516.1| mitochondrial processing peptidase alpha subunit [Babesia bovis
T2Bo]
gi|154798770|gb|EDO07948.1| mitochondrial processing peptidase alpha subunit, putative [Babesia
bovis]
Length = 496
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 54/107 (50%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +++ SV+ + + + AG+RYE D LG++ ++ + A ST +H I+ V+
Sbjct: 75 NGLRIASVDRGGMDSLLGLYVGAGSRYEGADELGVSSMIENMAFHSTAHLSHLRTIKTVE 134
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
GG+ RE I Y E +R+++ + L V F PWE+
Sbjct: 135 TLGGNASCNAFREHIAYHGECLRRDVPIMVNLLIGNVLFPRFLPWEM 181
>gi|294657847|ref|XP_460140.2| DEHA2E19206p [Debaryomyces hansenii CBS767]
gi|199432991|emb|CAG88413.2| DEHA2E19206p [Debaryomyces hansenii CBS767]
Length = 508
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 129 KRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGIT 188
KR++A+ + A +P+I+ T N +++V+ + + + AG+R+E P+ G++
Sbjct: 16 KRNYASS-SVAAFANPNIEMTTLQNGLRIVTDSTPGHFSALGAYVDAGSRFENPEKPGLS 74
Query: 189 HVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASV 248
H+ A ST+++T ++ ++ + GG+ + RE ++Y K++ + +A
Sbjct: 75 HIFDRLAWKSTDQYTGIEMMENLSKLGGNYMCSAQRESMIYQASVFNKDVDKMFDCIAQT 134
Query: 249 V 249
+
Sbjct: 135 I 135
>gi|237836507|ref|XP_002367551.1| mitochondrial-processing peptidase alpha subunit, putative
[Toxoplasma gondii ME49]
gi|211965215|gb|EEB00411.1| mitochondrial-processing peptidase alpha subunit, putative
[Toxoplasma gondii ME49]
Length = 563
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%)
Query: 145 DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTH 204
+IQ N +++ S++ A + + AG R+E N G+TH++++ A ST +
Sbjct: 130 NIQYSKLDNGLRIASMDRGGLTASLGLFVHAGTRFEDVTNFGVTHMIQNLAFASTAHLSL 189
Query: 205 FGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
++ ++ G + V RE +VY+ E +R + + L V F PWE+
Sbjct: 190 LRTVKTIEVLGANAGCVVGREHLVYSAECLRSHMPLLVPMLTGNVLFPRFLPWEL 244
>gi|221484024|gb|EEE22328.1| mitochondrial processing peptidase alpha subunit, putative
[Toxoplasma gondii GT1]
gi|221505294|gb|EEE30948.1| mitochondrial-processing peptidase alpha subunit, putative
[Toxoplasma gondii VEG]
Length = 563
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%)
Query: 145 DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTH 204
+IQ N +++ S++ A + + AG R+E N G+TH++++ A ST +
Sbjct: 130 NIQYSKLDNGLRIASMDRGGLTASLGLFVHAGTRFEDVTNFGVTHMIQNLAFASTAHLSL 189
Query: 205 FGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
++ ++ G + V RE +VY+ E +R + + L V F PWE+
Sbjct: 190 LRTVKTIEVLGANAGCVVGREHLVYSAECLRSHMPLLVPMLTGNVLFPRFLPWEL 244
>gi|156848462|ref|XP_001647113.1| hypothetical protein Kpol_1050p115 [Vanderwaltozyma polyspora DSM
70294]
gi|156117796|gb|EDO19255.1| hypothetical protein Kpol_1050p115 [Vanderwaltozyma polyspora DSM
70294]
Length = 368
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 159 SVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSL 218
S N + ++++ + AG+RY T D G++H+L +T + + +R + GG
Sbjct: 22 STNNSDNVSKLFIKVYAGSRYATKD--GVSHLLSRFNFHNTNDKSALRFVRESELLGGKF 79
Query: 219 YATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD-LTPRLKYD 269
+TVDRE I + +++++ + L SV+ KT FRP E+ + + P K+D
Sbjct: 80 KSTVDREYITLSATFLKEDLPYYVNALGSVLYKTSFRPHELPESVIPVAKHD 131
>gi|19075198|ref|NP_587698.1| ubiquinol-cytochrome-c reductase complex core protein Qcr2
(predicted) [Schizosaccharomyces pombe 972h-]
gi|6136099|sp|P78761.2|QCR2_SCHPO RecName: Full=Cytochrome b-c1 complex subunit 2, mitochondrial;
AltName: Full=Complex III subunit 2; AltName: Full=Core
protein II; AltName: Full=Ubiquinol-cytochrome-c
reductase complex core protein 2; Flags: Precursor
gi|3647338|emb|CAA21062.1| ubiquinol-cytochrome-c reductase complex core protein Qcr2
(predicted) [Schizosaccharomyces pombe]
Length = 426
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 7/118 (5%)
Query: 149 GTSYNKVKVVSVN---ETSPIA--RISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
G SY KV V+ +P A +SV AG+RY+ PD G++H+L A +TEE +
Sbjct: 20 GISYTPKKVEGVSFAGRETPTATGSLSVVINAGSRYQ-PDA-GVSHLLEKFAFKTTEERS 77
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
I R + GG L + RE I+ T + + + + + LA VV T+F P+++++
Sbjct: 78 ALRITRESELLGGQLSTQITREHIILTARFLNEYLEYYARLLAEVVDATKFLPFQLTE 135
>gi|195604918|gb|ACG24289.1| mitochondrial-processing peptidase alpha subunit [Zea mays]
Length = 505
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 12/201 (5%)
Query: 73 IARGKALLKRHLADSFETLDSTVDSVVRQAVTTGVVKSLPDLLAEVEAVSSSDVSAKRSF 132
+A G LKRH A++ +++ +R A T+ +S + S+++ F
Sbjct: 4 VASGLGALKRHGANA-----QMMNAAIRCASTSVAQRSSGGFWTWLTGARSNEIPPP-DF 57
Query: 133 AAQPATKALFSPD-IQSG-----TSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLG 186
T PD +++G T N VK+ S + V G+ YE P+ G
Sbjct: 58 TLPGVTIPPPLPDHVEAGKTRVTTLPNGVKIASETSAGSSCSVGVYVDCGSVYEAPETTG 117
Query: 187 ITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLA 246
+ +L++ A +T + ++R ++ GGS A+ RE + YT A++ + + + L
Sbjct: 118 ASQLLKTMAFTTTANRSELRVVREIEAIGGSAKASASREMMSYTYGALKTYMPEMVEVLI 177
Query: 247 SVVGKTEFRPWEVSDLTPRLK 267
V F WEV + RL+
Sbjct: 178 DCVRNPAFLDWEVKEQILRLQ 198
>gi|367034614|ref|XP_003666589.1| hypothetical protein MYCTH_2145409 [Myceliophthora thermophila ATCC
42464]
gi|347013862|gb|AEO61344.1| hypothetical protein MYCTH_2145409 [Myceliophthora thermophila ATCC
42464]
Length = 549
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 128 AKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGI 187
A+R FAA + K + P +G VKV S ++ P R++V KAG RYE G+
Sbjct: 24 AQRGFAAAASPKPSYEPTTIAG-----VKVASRDDNGPTTRLAVVAKAGTRYEPLP--GL 76
Query: 188 THVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLAS 247
T L A +T++ + I R V+ GG L A RE +V +R ++ + + LA
Sbjct: 77 TVGLEEFAFKNTQKRSALRITREVELLGGQLNAYHTREALVLQANFLRDDLPYFTELLAE 136
Query: 248 VVGKTEF 254
V+ +T +
Sbjct: 137 VLSQTRY 143
>gi|50555522|ref|XP_505169.1| YALI0F08613p [Yarrowia lipolytica]
gi|52783482|sp|Q6C2E3.1|QCR2_YARLI RecName: Full=Cytochrome b-c1 complex subunit 2, mitochondrial;
AltName: Full=Complex III subunit 2; AltName: Full=Core
protein II; AltName: Full=Ubiquinol-cytochrome-c
reductase complex core protein 2; Flags: Precursor
gi|49651039|emb|CAG77976.1| YALI0F08613p [Yarrowia lipolytica CLIB122]
Length = 417
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQA 214
VKV + + SPI+ +SV + G+RY T G++H+L A +T + +R ++
Sbjct: 23 VKVAAQDGQSPISDLSVVLRGGSRYATVP--GVSHILEKFAFQNTVPKSALRFVRELELF 80
Query: 215 GGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD-LTPRLKYDRLTR 273
GG LY RE IV + +++++ + A+V+ +T+F+ +E+++ + P + D L R
Sbjct: 81 GGKLYTHTTREHIVLRTQFLKQDLPYFVDAFANVLKETKFQQFELTERVAPVAELDLLKR 140
Query: 274 PS 275
S
Sbjct: 141 ES 142
>gi|242056107|ref|XP_002457199.1| hypothetical protein SORBIDRAFT_03g003160 [Sorghum bicolor]
gi|241929174|gb|EES02319.1| hypothetical protein SORBIDRAFT_03g003160 [Sorghum bicolor]
Length = 505
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 13/214 (6%)
Query: 73 IARGKALLKRHLADSFETLDSTVDSVVRQAVTTGVVKSLPDLLAEVEAVSSSDVSAKRSF 132
+A G LKRH AD+ ++ +R A T+ S + S+++ F
Sbjct: 4 VASGLGALKRHGADA-----QMMNVAIRCASTSVAQGSSGGFWTWLTGARSNEIPPP-DF 57
Query: 133 AAQPATKALFSPD-IQSG-----TSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLG 186
A T PD +++G T N VK+ S + V G+ YE P+ G
Sbjct: 58 ALPGVTIPPPLPDHVEAGKTIVTTLPNGVKIASETSAGSSCSVGVYVDCGSVYEAPETTG 117
Query: 187 ITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLA 246
+ ++++ A +T + ++R + GG+ A+ RE + YT A++ + + + L
Sbjct: 118 ASQLVKTMAFATTANRSELRVVREIDAIGGTAKASASREMMSYTYRALKTYMPEMVEVLI 177
Query: 247 SVVGKTEFRPWEVSDLTPRLKYDRLTRPSQGNEK 280
V F WEV + RLK + L + S EK
Sbjct: 178 DCVRNPAFLDWEVKEQILRLKAE-LVKSSSNPEK 210
>gi|363543395|ref|NP_001241707.1| putative mitochondrial processing peptidase alpha subunit family
protein [Zea mays]
gi|194702312|gb|ACF85240.1| unknown [Zea mays]
gi|414875907|tpg|DAA53038.1| TPA: putative mitochondrial processing peptidase alpha subunit
family protein [Zea mays]
Length = 505
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 12/201 (5%)
Query: 73 IARGKALLKRHLADSFETLDSTVDSVVRQAVTTGVVKSLPDLLAEVEAVSSSDVSAKRSF 132
+A G LKRH A++ +++ +R A T+ +S + S+++ F
Sbjct: 4 VASGLGALKRHGANA-----QMMNAAIRCASTSVAQRSSGGFWTWLTGARSNEIPPP-DF 57
Query: 133 AAQPATKALFSPD-IQSG-----TSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLG 186
T PD +++G T N VK+ S + V G+ YE P+ G
Sbjct: 58 TLPGVTIPPPLPDHVEAGKTRVTTLPNGVKIASETSAGSSCSVGVYVDCGSVYEAPETTG 117
Query: 187 ITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLA 246
+ +L++ A +T + ++R ++ GGS A+ RE + YT A++ + + + L
Sbjct: 118 ASQLLKTMAFTTTANRSELRVVREIEAIGGSAKASASREMMSYTYGALKTYMPEMVEVLI 177
Query: 247 SVVGKTEFRPWEVSDLTPRLK 267
V F WEV + RL+
Sbjct: 178 DCVRNPAFLDWEVKEQILRLQ 198
>gi|6003679|gb|AAF00541.1|AF187883_1 mitochondrial processing peptidase alpha subunit homolog, partial
[Toxoplasma gondii]
Length = 438
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%)
Query: 145 DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTH 204
+IQ N +++ S++ A + + AG R+E N G+TH++++ A ST +
Sbjct: 7 NIQYSKLDNGLRIASMDRGGLTASLGLFVHAGTRFEDVTNFGVTHMIQNLAFASTAHLSL 66
Query: 205 FGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
++ ++ G + V RE +VY+ E +R + + L V F PWE+
Sbjct: 67 LRTVKTIEVLGANAGCVVGREHLVYSAECLRSHMPLLVPMLTGNVLFPRFLPWEL 121
>gi|321257023|ref|XP_003193441.1| ubiquinol-cytochrome C reductase complex core protein 2 precursor
[Cryptococcus gattii WM276]
gi|317459911|gb|ADV21654.1| Ubiquinol-cytochrome C reductase complex core protein 2 precursor,
putative [Cryptococcus gattii WM276]
Length = 433
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 150 TSYNKVKVVSVNETSPIA--RISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGI 207
T+ V VV P A ++VA KAG+RYET G+ HVL+S A +T +
Sbjct: 26 TTAGGVNVVGFENKGPAATSSLTVAIKAGSRYETTP--GVAHVLKSFAYKATASASALRT 83
Query: 208 IRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDL 262
R + GG L A + RE ++ + E +R + H LASV+ ++F E+++L
Sbjct: 84 AREAELYGGVLSAALTREHLLLSAEFLRGDEEHFLNVLASVLSSSQFYQHELNEL 138
>gi|448531644|ref|XP_003870297.1| Mas2 processing peptidase, catalytic (alpha) subunit [Candida
orthopsilosis Co 90-125]
gi|380354651|emb|CCG24167.1| Mas2 processing peptidase, catalytic (alpha) subunit [Candida
orthopsilosis]
Length = 502
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 129 KRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGIT 188
KR +A+ TK P+I+ T N +++V+ + + + AG+RYE P N G++
Sbjct: 17 KRFYASSTQTK----PNIEMTTLANGLRLVTDSTPGHFSALGAYVDAGSRYEDPKNPGLS 72
Query: 189 HVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASV 248
H+ A STE+++ ++ ++ + GG+ ++ RE +++ K++ + + +A
Sbjct: 73 HIHDRLAWKSTEKYSGLQMMENLSKLGGNYMSSAQRESMIFQASVFNKDVDQMMEAIAQT 132
Query: 249 V 249
V
Sbjct: 133 V 133
>gi|209879870|ref|XP_002141375.1| peptidase M16 inactive domain-containing protein [Cryptosporidium
muris RN66]
gi|209556981|gb|EEA07026.1| peptidase M16 inactive domain-containing protein [Cryptosporidium
muris RN66]
Length = 553
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 51/84 (60%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +K+VS + ++++S+ AG+R+ET + G++H L+ A STE ++ IR ++
Sbjct: 125 NGLKIVSSDCGEFVSKLSLYIHAGSRFETSETQGVSHFLQLMAFKSTEYLSYLQTIRTLE 184
Query: 213 QAGGSLYATVDREGIVYTIEAVRK 236
G + + +RE IVY +E +R+
Sbjct: 185 ILGANAGSNANREHIVYNVECLRE 208
>gi|296004584|ref|XP_001351788.2| mitochondrial processing peptidase alpha subunit, putative
[Plasmodium falciparum 3D7]
gi|21591792|gb|AAL49970.1| mitochondrial processing peptidase alpha subunit [Plasmodium
falciparum]
gi|225631698|emb|CAD51595.2| mitochondrial processing peptidase alpha subunit, putative
[Plasmodium falciparum 3D7]
Length = 534
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDN----LGITHVLRSAAGLSTEEFTHFGII 208
N +K++S N + + I + K G+RYE ++ G++ +L + A ST +H I
Sbjct: 108 NDLKIISTNRNNSVCSIGLYVKCGSRYEEINDKVNEQGMSVMLENMAFHSTAHLSHLRTI 167
Query: 209 RHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKY 268
+ +++ G ++ RE +VY+ E +++ + V + V F WE+ + RL
Sbjct: 168 KSLEKIGATVSCNAFREHMVYSCECLKEYLPIVTNLIIGNVLFPRFLSWEMKNNVNRLNL 227
Query: 269 DR 270
R
Sbjct: 228 MR 229
>gi|357132908|ref|XP_003568070.1| PREDICTED: mitochondrial-processing peptidase subunit alpha-like
[Brachypodium distachyon]
Length = 466
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 153 NKVKVVSVNETSP--IARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRH 210
N +K+ S ETSP A + + G+ YET + G +H+L A ST +H ++R
Sbjct: 45 NGIKIAS--ETSPGSAASVGLYIDCGSVYETAASSGASHLLERMAFRSTTNRSHLRLVRE 102
Query: 211 VQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLK 267
V+ GG++ A+ RE + YT +A++ + + L V F WEV + ++K
Sbjct: 103 VEAIGGNVSASASREQMSYTYDALKTYAPEMVEVLLDSVRNPAFLEWEVKEQLQKIK 159
>gi|365990634|ref|XP_003672146.1| hypothetical protein NDAI_0J00110 [Naumovozyma dairenensis CBS 421]
gi|343770921|emb|CCD26903.1| hypothetical protein NDAI_0J00110 [Naumovozyma dairenensis CBS 421]
Length = 378
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
Query: 146 IQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHF 205
+ S YN V++V+ S ++ ++V AG+RY D G++H+L +T + +
Sbjct: 18 VSSKAHYN---VLAVDSPSKVSTLAVKVHAGSRYANKD--GLSHLLSRFNFQNTNDKSAL 72
Query: 206 GIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD-LTP 264
++R + G L +TVDRE I +++ + + LA+ + KT FRP E+ + + P
Sbjct: 73 RLVRETELLSGELASTVDREYITLKATFLKEHLPYYVNVLANALYKTSFRPHELPESVLP 132
Query: 265 RLKYDRLTRPSQG 277
YD L R Q
Sbjct: 133 AANYD-LARYDQN 144
>gi|209730310|gb|ACI66024.1| Cytochrome b-c1 complex subunit 2, mitochondrial precursor [Salmo
salar]
Length = 160
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLST 199
+ + S++ SP +RI V KAG RYE+P+N G+TH+LR AA L+T
Sbjct: 46 LMIASLDNYSPASRIGVFVKAGCRYESPENQGVTHLLRLAANLTT 90
>gi|270356841|gb|ACZ80630.1| putative ubiquinol-cytochrome C reductase complex core
[Filobasidiella depauperata]
Length = 500
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 8/134 (5%)
Query: 148 SGTSYNKVKVVSVNETSPIA--RISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHF 205
S TS V V+ P A +++A KAG+RYET G+ HVL+S A +T +
Sbjct: 89 STTSAGGVNVLGFENKGPSATSSLTIAIKAGSRYETTP--GVAHVLKSFAYKATASASAL 146
Query: 206 GIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLT-P 264
R + GG L A++ RE ++ + E +R + H LASV+ +++ E+ +L P
Sbjct: 147 RTAREAELYGGILSASLGREHLLLSAEFLRGDEEHFLNVLASVLSSSQYYQHELKELVLP 206
Query: 265 RLKYDRL---TRPS 275
++ + L T PS
Sbjct: 207 VVELESLAASTSPS 220
>gi|170111948|ref|XP_001887177.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164637951|gb|EDR02232.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 426
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQA 214
VKV SVN P + ++V KAG+R+ET D G+ + L++ A ST + + G +R +
Sbjct: 28 VKVASVNYNQPTSSVTVLVKAGSRFETKD--GVANALKNFAFKSTAKRSAIGTVRESELY 85
Query: 215 GGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRL 266
GG L A++ RE + + E +R + L S + +F E + RL
Sbjct: 86 GGVLSASLGREYLALSAEFLRGDEPFFVDLLTSFITSAKFTRHEFEEYVLRL 137
>gi|149068068|gb|EDM17620.1| ubiquinol cytochrome c reductase core protein 2, isoform CRA_e
[Rattus norvegicus]
Length = 116
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + + S+ +P++RI + KAG+RYE + LG +H+LR A+ L+T+ + F I R ++
Sbjct: 44 NGLVIASLENYAPLSRIGLFIKAGSRYENYNYLGTSHLLRLASTLTTKGASSFKITRGIE 103
Query: 213 QAGGSL 218
GG L
Sbjct: 104 AVGGKL 109
>gi|389746434|gb|EIM87614.1| LuxS/MPP-like metallohydrolase [Stereum hirsutum FP-91666 SS1]
Length = 427
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQA 214
VKV +V+ PI+ ++V KAG+RYE G+ HVL + A ST + + G +R +
Sbjct: 26 VKVATVDNGQPISTVTVLLKAGSRYE--QKPGLAHVLSNFAFKSTGKRSALGTVREAELR 83
Query: 215 GGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG L +T+ RE + T E +R + LA + +F E+++
Sbjct: 84 GGLLSSTLSREHLALTAEFLRGDESFFVDVLADYIAGAKFTRHELTE 130
>gi|443916464|gb|ELU37526.1| ubiquinol-cytochrome C reductase complex core protein 2
[Rhizoctonia solani AG-1 IA]
Length = 409
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQA 214
V V +V+ P ++V KAG+RYET G H+L++ A +T + + +R +
Sbjct: 26 VSVAAVDHGQPTTAVTVLVKAGSRYETQQ--GTAHLLKNFAFKTTSQRSALRTVREAELY 83
Query: 215 GGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVS-DLTPR 265
GG L +T+ RE + T E + H L+SVV T+F P E + D+ P
Sbjct: 84 GGVLSSTLTREHLAITAEFLP----HFVDLLSSVVTSTQFLPHEFAEDVVPH 131
>gi|240276951|gb|EER40461.1| processing/enhancing protein [Ajellomyces capsulatus H143]
Length = 467
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYET-PDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQ 213
VK+ + TSP +S+ KAG+RY+ P G +++L A ST + + I R +
Sbjct: 49 VKIANREFTSPTTTLSLVAKAGSRYQPFP---GYSNLLEKFAFKSTSKRSAMRITRESEL 105
Query: 214 AGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRL-KYDR 270
GG L AT RE +V + + + K++ + + LA V+ KT + +E+ +L L KY +
Sbjct: 106 LGGELAATYSRENVVLSAKFLSKDLPYYTELLADVITKTNYSQYELDELIMNLVKYSQ 163
>gi|149237671|ref|XP_001524712.1| hypothetical protein LELG_03744 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451309|gb|EDK45565.1| hypothetical protein LELG_03744 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 571
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Query: 122 SSSDVSAKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYET 181
S S + +KR +A+ T P I+ T N +++V+ + + + G+RYE
Sbjct: 78 SGSLLISKRLYASNATTAT--PPHIEMTTLNNGLRLVTDSTPGHFSALGAFVDGGSRYED 135
Query: 182 PDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHV 241
P G++H+ A STE++T ++ +++ GG+ + RE +++ K++G +
Sbjct: 136 PTKPGLSHIQDRLAWKSTEKYTGLQMLENLRMLGGNYMGSAQRESLIFQASVFNKDVGLM 195
Query: 242 HKFLASVV 249
+A +
Sbjct: 196 LDLIAQTI 203
>gi|452825595|gb|EME32591.1| mitochondrial processing peptidase [Galdieria sulphuraria]
Length = 440
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N ++V+S + ++ + + AG+R ET + G TH L A ST + +HF + R ++
Sbjct: 6 NGIRVISQDLDGHVSSLGLYVDAGSRDETSEVAGATHFLEHMAFKSTTKRSHFMLTRDLE 65
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFR 255
+ G ++ A RE + YT E +RK + V + +A V FR
Sbjct: 66 KLGATVGAAASRESLSYTAECLRKVVPGVVEAIAETVLYPRFR 108
>gi|341879647|gb|EGT35582.1| hypothetical protein CAEBREN_14395 [Caenorhabditis brenneri]
Length = 418
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + VV+ + ++++ +AF+AG+RY++ G+ H +R+ G + + ++
Sbjct: 28 NGLSVVAQDNNGAVSQLILAFRAGSRYQSVTQQGLVHHIRNFVGRDVQSYPGLQLVWSSA 87
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV-SDLTPRLKYD 269
+GG L + R+ + R + + L V + F+PWE+ D+ P + D
Sbjct: 88 ASGGQLNSFASRDVFGVQMSVPRDKADYALSILGQVAAQPAFKPWEMEDDVLPTIHAD 145
>gi|328770097|gb|EGF80139.1| hypothetical protein BATDEDRAFT_1934, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 442
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N V+V + N + AG++YE+ +N G++H+L A STE++T +I+ ++
Sbjct: 7 NGVRVATHNSLGHFVSAGIYVDAGSKYESSENAGVSHMLDRMAFKSTEKYTTPQLIKELE 66
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEF 254
GG++ A REGI+Y R ++ + +V + F
Sbjct: 67 SLGGNVIAHSSREGIMYQASVFRHDLAKMIGIYGQMVQRPLF 108
>gi|325094885|gb|EGC48195.1| processing/enhancing protein [Ajellomyces capsulatus H88]
Length = 574
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQA 214
VK+ + TSP +S+ KAG+RY+ G +++L A ST + + I R +
Sbjct: 156 VKIANREFTSPTTTLSLVAKAGSRYQPFP--GYSNLLEKFAFKSTSKRSAMRITRESELL 213
Query: 215 GGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRL-KYDR 270
GG L AT RE +V + + + K++ + + LA V+ KT + +E+ +L L KY +
Sbjct: 214 GGELAATYSRENVVLSAKFLSKDLPYYTELLADVITKTNYSQYELDELIMNLVKYSQ 270
>gi|399218992|emb|CCF75879.1| unnamed protein product [Babesia microti strain RI]
Length = 482
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETP--DNLGITHVLRSAAGLSTEEFTHFGIIRH 210
N +++ SV+++ I+ + + AG+RYE P LG++ ++ + + ST +H ++
Sbjct: 54 NGLRIASVDKSGLISTLGLYVHAGSRYEDPAQGELGVSSMIENISFHSTAHLSHLRTLKV 113
Query: 211 VQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
V+ G ++ T RE IVY+ E +R + L V F PWEV
Sbjct: 114 VETIGANVNCTSFREHIVYSAECLRNYYPILLNLLVGNVLFPRFLPWEV 162
>gi|320165621|gb|EFW42520.1| hypothetical protein CAOG_07363 [Capsaspora owczarzaki ATCC 30864]
Length = 472
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLS-TEEFTHFGIIRHV 211
N V VVSV + P ++ AG+R+E G +H LR A S T + F + R
Sbjct: 51 NGVTVVSVETSGPGLTVAAYTGAGSRFEDAHTAGASHFLRRLAWNSGTTGASGFRLTRTS 110
Query: 212 QQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDRL 271
+ G ++A+ RE T++ + +G +A+VV F+PWEV+D P ++ D L
Sbjct: 111 ELDGAQIHASSSREHFAVTVDTHTEGLGKALAAVANVVAGPAFQPWEVNDAAPFVELDLL 170
>gi|326487432|dbj|BAJ89700.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326526381|dbj|BAJ97207.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 499
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N V+V S + P A + V +G+ +E+P++ G+TH+L A T +H I++ V+
Sbjct: 76 NGVRVASEDVPGPSACVGVFVASGSVHESPESAGVTHLLEKLALKDTAHRSHMQIVQEVE 135
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEF 254
GG++ A+ RE +VY+ + ++ I + L V F
Sbjct: 136 ATGGNVGASASREQMVYSYDTLKAYIPQAIEVLLDSVRNPLF 177
>gi|326430646|gb|EGD76216.1| hypothetical protein PTSG_00919 [Salpingoeca sp. ATCC 50818]
Length = 445
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 51/125 (40%)
Query: 145 DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTH 204
D+Q N V VVS + + ISV AG + ET G+TH LR+ A ST +
Sbjct: 28 DVQVTKLANGVTVVSQEPDANVTTISVTVGAGTQNETFQTSGVTHYLRNLAFQSTASRSA 87
Query: 205 FGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTP 264
I R + G A R+ I Y + + H L VVG WEV
Sbjct: 88 LRITREAEANGSRYTAESGRDFISYNAYTLPQSAEHAADVLTEVVGAPNLHDWEVPKQNA 147
Query: 265 RLKYD 269
R+ D
Sbjct: 148 RVARD 152
>gi|336468973|gb|EGO57136.1| hypothetical protein NEUTE1DRAFT_123473 [Neurospora tetrasperma
FGSC 2508]
gi|350288720|gb|EGZ69945.1| ubiquinol-cytochrome C reductase complex CORE protein 2 precursor
[Neurospora tetrasperma FGSC 2509]
Length = 453
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
Query: 127 SAKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLG 186
+A+R FAA + A + P +G VKV S +++ P R++V KAG RYE G
Sbjct: 23 TAQRGFAAAASPAASYEPTTIAG-----VKVASRDDSGPTTRLAVVAKAGTRYEPLP--G 75
Query: 187 ITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLA 246
+T L A +T + T I R + GG L A RE ++ +R+++ + + LA
Sbjct: 76 LTVGLEEFAFKNTNKRTALRITRESELLGGQLQAYHTREAVILQASFLREDLPYFTELLA 135
Query: 247 SVVGKTEFRPWEVSDLTPRLKYDR 270
V+ +T++ E +L +++
Sbjct: 136 EVISETKYTTHEFHELVENCIHEK 159
>gi|395334872|gb|EJF67248.1| hypothetical protein DICSQDRAFT_176908 [Dichomitus squalens
LYAD-421 SS1]
Length = 525
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%)
Query: 122 SSSDVSAKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYET 181
+S V RS A + A P +Q T N ++V + N + + + AG+RYET
Sbjct: 13 ASRRVPCHRSIHATTPSSASPDPPVQITTLPNGIRVATENTPGHFSSLGLYVDAGSRYET 72
Query: 182 PDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHV 241
P LG++H L A +T+ + + + GG + + RE I+Y K
Sbjct: 73 PATLGVSHFLDRMAFKTTKTRSEEDMAADIDGLGGQILCSSARESIMYQSSHFHKGTPLA 132
Query: 242 HKFLASVVGKTEFRPWEVS 260
+A V F P E++
Sbjct: 133 MSLIADTVLDPAFLPEEIA 151
>gi|301091111|ref|XP_002895747.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262096659|gb|EEY54711.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 510
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 54/107 (50%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
+ ++V+S A + + AG+R+E D++G++H+L ST +H ++ ++
Sbjct: 75 SDLRVISQETYGQAATLGIFIDAGSRFEDDDSIGVSHLLEHLGFKSTTSRSHAQLVHEIE 134
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
G ++ RE I+YTI+ +R + + LA + + P E+
Sbjct: 135 DIGALTTSSCGREQIIYTIDLLRDNVEKGLELLADAILNVDLVPEEM 181
>gi|392577342|gb|EIW70471.1| hypothetical protein TREMEDRAFT_38220 [Tremella mesenterica DSM
1558]
Length = 439
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 62/121 (51%), Gaps = 5/121 (4%)
Query: 155 VKVVSVNETSPIA--RISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
VKV + P A ++V KAG+RYET G+ H L+S A ST + R +
Sbjct: 30 VKVAGIETGQPAATTSLTVVVKAGSRYET--KPGVAHALKSFAYKSTSAGSALKTTRETE 87
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLT-PRLKYDRL 271
GG L AT+ RE + T E +R + H LASV+ T F P E ++L P L+ + L
Sbjct: 88 LYGGVLSATLGREHLYLTAEFLRGDEAHFLSLLASVLSSTHFYPHEYAELVLPTLEAETL 147
Query: 272 T 272
+
Sbjct: 148 S 148
>gi|367054058|ref|XP_003657407.1| hypothetical protein THITE_2082556 [Thielavia terrestris NRRL 8126]
gi|347004673|gb|AEO71071.1| hypothetical protein THITE_2082556 [Thielavia terrestris NRRL 8126]
Length = 616
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 128 AKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGI 187
A+R FAA + KA + P T+ VKV S ++ P R++V KAG RYE G+
Sbjct: 24 ARRGFAAVASPKASYEP-----TTIGDVKVASRDDGGPTTRLAVVAKAGTRYEPLP--GL 76
Query: 188 THVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLAS 247
T L A +T++ + I R + GG L + RE +V +R+++ + + L
Sbjct: 77 TVGLEEFAFKNTQKRSALRITRETELLGGQLSSYHTREALVLQANFLREDLPYFVELLGE 136
Query: 248 VVGKTEF 254
V+ +T +
Sbjct: 137 VLSQTRY 143
>gi|241608598|ref|XP_002406607.1| mitochondrial processing peptidase alpha subunit, putative [Ixodes
scapularis]
gi|215502684|gb|EEC12178.1| mitochondrial processing peptidase alpha subunit, putative [Ixodes
scapularis]
Length = 530
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEF-THFGIIRHV 211
N +KV S N+ + V +G+RYE P GI+H L A ST+EF +++ +
Sbjct: 71 NGLKVASQNKFGQFCTVGVVIDSGSRYEAPYPSGISHFLEKLAFNSTKEFRDRDAVLQEL 130
Query: 212 QQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
++ GG R+ ++Y A + +G V K L VV + F+ EV
Sbjct: 131 EKQGGICDCQGSRDTMIYAASADARGLGPVVKLLGDVVLRPLFKEEEV 178
>gi|365757831|gb|EHM99706.1| Qcr2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 368
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 151 SYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRH 210
S ++ V + + S ++ ++V G+RY T D G+ H+L +T + ++R
Sbjct: 13 SVRRLTVSARDAPSKVSTLAVKVHGGSRYATKD--GVAHLLNRFNFQNTNTRSALKLVRE 70
Query: 211 VQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD-LTPRLKYD 269
+ GG +T+DRE I T ++ ++ + LA V+ KT F+P E+++ + P +YD
Sbjct: 71 SELLGGIFKSTLDREYITLTATFLKDDLPYYVNALADVLYKTAFKPHELTESVLPAARYD 130
>gi|442751769|gb|JAA68044.1| Putative mitochondrial-processing peptid [Ixodes ricinus]
Length = 555
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEF-THFGIIRHV 211
N +KV S N+ + V +G+RYE P GI+H L A ST+EF +++ +
Sbjct: 82 NGLKVASQNKFGQFCTVGVVIDSGSRYEAPYPSGISHFLEKLAFNSTKEFRDRDAVLQEL 141
Query: 212 QQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
++ GG R+ ++Y A + +G V K L VV + F+ EV
Sbjct: 142 EKQGGICDCQGSRDTMIYAASADARGLGPVVKLLGDVVLRPLFKEEEV 189
>gi|429327321|gb|AFZ79081.1| mitochondrial processing peptidase alpha subunit, putative [Babesia
equi]
Length = 526
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%)
Query: 145 DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTH 204
DI+ N +++ ++ + + AG+R+ET G++ ++ + A ST +H
Sbjct: 97 DIKFAKLENGLRIACIDRGGIDTMLGLYVNAGSRFETSSEAGVSSMIENMAFHSTAHLSH 156
Query: 205 FGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
I+ V+ GG++ RE + Y E +R ++ + L V F PWE+
Sbjct: 157 LRTIKTVETLGGNISCNAFREHMAYHAEGLRSDMPILLNILIGNVLFPRFLPWEL 211
>gi|354544653|emb|CCE41379.1| hypothetical protein CPAR2_303680 [Candida parapsilosis]
Length = 503
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 58/107 (54%)
Query: 143 SPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEF 202
+P+I+ T N +++V+ + + + AG+RYE P N G++H+ A STE++
Sbjct: 28 NPNIEMTTLANGLRLVTDSTPGHFSALGGYVDAGSRYEDPKNPGLSHIHDRLAWKSTEKY 87
Query: 203 THFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ ++ ++ + GG+ ++ RE +++ K++ + + +A V
Sbjct: 88 SGLQMMENLSKLGGNYMSSAQRESMIFQASVFNKDVDQMMEAIAQTV 134
>gi|302695497|ref|XP_003037427.1| hypothetical protein SCHCODRAFT_64758 [Schizophyllum commune H4-8]
gi|300111124|gb|EFJ02525.1| hypothetical protein SCHCODRAFT_64758 [Schizophyllum commune H4-8]
Length = 515
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%)
Query: 143 SPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEF 202
SP +Q T NK++V + + + + AG+RYETPD LG++H L A ST+
Sbjct: 27 SPSVQLTTLPNKIRVATERTPGHFSSVGLYVDAGSRYETPDILGVSHFLDRMAFKSTKNR 86
Query: 203 THFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
T + + G + + RE ++Y +A V F P EV
Sbjct: 87 TEEEMAAAIHSLGSQILCSSTREALMYQSSHFHDGTPLAVSLIADTVCNPRFTPEEV 143
>gi|388582659|gb|EIM22963.1| LuxS/MPP-like metallohydrolase [Wallemia sebi CBS 633.66]
Length = 404
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 169 ISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIV 228
++V F AG R+E DN G+ +VL++ A +T E + +R + AGG LY+T+ R+ ++
Sbjct: 23 LNVVFNAGTRFE--DNQGVANVLKNFAFRNTAERSSLRQVREAEAAGGVLYSTLTRDNLI 80
Query: 229 YTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDRLTRPS 275
+ + + + + LA VV T+F E YD +P+
Sbjct: 81 LSADFLPQHQELFVQILADVVKSTKFTQHE---------YDEAVKPA 118
>gi|225554606|gb|EEH02902.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 467
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYET-PDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQ 213
VK+ + TSP +S+ KAG+RY+ P G +++L A ST + + I R +
Sbjct: 49 VKIANREFTSPTTTLSLVAKAGSRYQPFP---GYSNLLEKFAFKSTSKRSALRITRESEL 105
Query: 214 AGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRL-KYDR 270
GG L AT RE +V + + + K++ + + LA V+ KT + E+ +L L KY +
Sbjct: 106 LGGELAATYSRENVVLSAKFLSKDLPYYTELLADVITKTNYSQHELDELIMNLVKYSQ 163
>gi|190408113|gb|EDV11378.1| 40 kDa ubiquinol cytochrome-c reductase core protein 2
[Saccharomyces cerevisiae RM11-1a]
gi|256272427|gb|EEU07409.1| Qcr2p [Saccharomyces cerevisiae JAY291]
gi|323331392|gb|EGA72810.1| Qcr2p [Saccharomyces cerevisiae AWRI796]
gi|365762643|gb|EHN04177.1| Qcr2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 368
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 166 IARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDRE 225
I+ ++V G+RY T D G+ H+L +T + ++R + GG+ +T+DRE
Sbjct: 28 ISTLAVKVHGGSRYATKD--GVAHLLNRFNFQNTNTRSALKLVRESELLGGTFKSTLDRE 85
Query: 226 GIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD-LTPRLKYD 269
I ++ ++ + LA V+ KT F+P E+++ + P +YD
Sbjct: 86 YITLKATFLKDDLPYYVNALADVLYKTAFKPHELTESVLPAARYD 130
>gi|323306884|gb|EGA60169.1| Qcr2p [Saccharomyces cerevisiae FostersO]
Length = 368
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 166 IARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDRE 225
I+ ++V G+RY T D G+ H+L +T + ++R + GG+ +T+DRE
Sbjct: 28 ISTLAVKVHGGSRYATKD--GVAHLLNRFNFQNTNTRSALKLVRESELLGGTFKSTLDRE 85
Query: 226 GIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD-LTPRLKYD 269
I ++ ++ + LA V+ KT F+P E+++ + P +YD
Sbjct: 86 YITLKATFLKDDLPYYVNALADVLYKTAFKPHELTESVLPAARYD 130
>gi|259150348|emb|CAY87151.1| Qcr2p [Saccharomyces cerevisiae EC1118]
Length = 368
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 166 IARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDRE 225
I+ ++V G+RY T D G+ H+L +T + ++R + GG+ +T+DRE
Sbjct: 28 ISTLAVKVHGGSRYATKD--GVAHLLNRFNFQNTNTRSALKLVRESELLGGTFKSTLDRE 85
Query: 226 GIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD-LTPRLKYD 269
I ++ ++ + LA V+ KT F+P E+++ + P +YD
Sbjct: 86 YITLKATFLKDDLPYYVNALADVLYKTAFKPHELTESVLPAARYD 130
>gi|323346049|gb|EGA80340.1| Qcr2p [Saccharomyces cerevisiae Lalvin QA23]
Length = 368
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 166 IARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDRE 225
I+ ++V G+RY T D G+ H+L +T + ++R + GG+ +T+DRE
Sbjct: 28 ISTLAVKVHGGSRYATKD--GVAHLLNRFNFQNTNTRSALKLVRESELLGGTFKSTLDRE 85
Query: 226 GIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD-LTPRLKYD 269
I ++ ++ + LA V+ KT F+P E+++ + P +YD
Sbjct: 86 YITLKATFLKDDLPYYVNALADVLYKTAFKPHELTESVLPAARYD 130
>gi|324512452|gb|ADY45158.1| Mitochondrial-processing peptidase subunit beta [Ascaris suum]
Length = 470
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%)
Query: 140 ALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLST 199
L P+ T N ++ S N P A + + AG+RYE N G+ H L A T
Sbjct: 39 VLNMPETHVTTITNGFRIASENSRIPTATVGIWIDAGSRYEDDHNNGVAHFLEHMAFKGT 98
Query: 200 EEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
+ + V+ G L A RE VY + +++ H + LA ++ K++ R E+
Sbjct: 99 LTRSQTQLEMEVENMGAHLNAYTSREQTVYYAKCFSQDLEHSVEILADILRKSQLRNIEI 158
>gi|302306826|ref|NP_983205.2| ACL199Cp [Ashbya gossypii ATCC 10895]
gi|442570004|sp|Q75CW5.2|QCR2_ASHGO RecName: Full=Cytochrome b-c1 complex subunit 2, mitochondrial;
AltName: Full=Complex III subunit 2; AltName: Full=Core
protein II; AltName: Full=Ubiquinol-cytochrome-c
reductase complex core protein 2; Flags: Precursor
gi|299788705|gb|AAS51029.2| ACL199Cp [Ashbya gossypii ATCC 10895]
gi|374106410|gb|AEY95319.1| FACL199Cp [Ashbya gossypii FDAG1]
Length = 366
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 166 IARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDRE 225
++ +SV + G+RY T D G+ H+L +T + ++R + GG +TVDRE
Sbjct: 27 VSTLSVQVQGGSRYATKD--GVAHLLSRFNFHNTGNKSALRLVRESELLGGRFQSTVDRE 84
Query: 226 GIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
I + +++++ + LA V+ KT FRP E+++
Sbjct: 85 HITLSATFLKEDLPYFVNALADVLYKTSFRPHELAE 120
>gi|440631807|gb|ELR01726.1| hypothetical protein GMDG_00102 [Geomyces destructans 20631-21]
Length = 462
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 128 AKRSFAAQPATKALFSPDIQSGTSY-------NKVKVVSVNETSPIARISVAFKAGARYE 180
A+R AQPAT+ F+ S TS+ N +KV S + +++V KAG RYE
Sbjct: 15 ARRQCCAQPATRRGFAAATGS-TSFSYENADVNGIKVASRDVAGHTTKLAVVAKAGTRYE 73
Query: 181 TPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGH 240
G+T L A +T+ + + R + GG L A RE +V +R ++
Sbjct: 74 LLP--GLTTALEQFAFKNTQRRSALRLTRESELLGGQLVAYHTREALVLEANFLRDDLPF 131
Query: 241 VHKFLASVVGKTEFRPWE 258
+ L+ V+ +T+F P E
Sbjct: 132 FTELLSEVISQTKFTPHE 149
>gi|6325449|ref|NP_015517.1| ubiquinol--cytochrome-c reductase subunit 2 [Saccharomyces
cerevisiae S288c]
gi|136696|sp|P07257.1|QCR2_YEAST RecName: Full=Cytochrome b-c1 complex subunit 2, mitochondrial;
AltName: Full=Complex III subunit 2; AltName: Full=Core
protein II; AltName: Full=Ubiquinol-cytochrome-c
reductase complex core protein 2; Flags: Precursor
gi|3578|emb|CAA28768.1| precursor QH2:cytochrome-c oxidoreductase subunit II [Saccharomyces
cerevisiae]
gi|786302|gb|AAB64620.1| Ubiquinol-cytochrome C reductase core protein 2 [Saccharomyces
cerevisiae]
gi|45270026|gb|AAS56394.1| YPR191W [Saccharomyces cerevisiae]
gi|151942961|gb|EDN61307.1| ubiquinol-cytochrome c oxidoreductase complex subunit
[Saccharomyces cerevisiae YJM789]
gi|285815715|tpg|DAA11607.1| TPA: ubiquinol--cytochrome-c reductase subunit 2 [Saccharomyces
cerevisiae S288c]
gi|392296194|gb|EIW07297.1| Qcr2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 368
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 166 IARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDRE 225
I+ ++V G+RY T D G+ H+L +T + ++R + GG+ +T+DRE
Sbjct: 28 ISTLAVKVHGGSRYATKD--GVAHLLNRFNFQNTNTRSALKLVRESELLGGTFKSTLDRE 85
Query: 226 GIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD-LTPRLKYD 269
I ++ ++ + LA V+ KT F+P E+++ + P +YD
Sbjct: 86 YITLKATFLKDDLPYYVNALADVLYKTAFKPHELTESVLPAARYD 130
>gi|14277713|pdb|1EZV|B Chain B, Structure Of The Yeast Cytochrome Bc1 Complex Co-
Crystallized With An Antibody Fv-Fragment
gi|20151119|pdb|1KYO|B Chain B, Yeast Cytochrome Bc1 Complex With Bound Substrate
Cytochrome C
gi|20151130|pdb|1KYO|M Chain M, Yeast Cytochrome Bc1 Complex With Bound Substrate
Cytochrome C
gi|24158772|pdb|1KB9|B Chain B, Yeast Cytochrome Bc1 Complex
gi|34811037|pdb|1P84|B Chain B, Hdbt Inhibited Yeast Cytochrome Bc1 Complex
gi|145579627|pdb|2IBZ|B Chain B, Yeast Cytochrome Bc1 Complex With Stigmatellin
gi|188036281|pdb|3CX5|B Chain B, Structure Of Complex Iii With Bound Cytochrome C In
Reduced State And Definition Of A Minimal Core Interface
For Electron Transfer.
gi|188036292|pdb|3CX5|M Chain M, Structure Of Complex Iii With Bound Cytochrome C In
Reduced State And Definition Of A Minimal Core Interface
For Electron Transfer.
gi|188036304|pdb|3CXH|B Chain B, Structure Of Yeast Complex Iii With Isoform-2 Cytochrome C
Bound And Definition Of A Minimal Core Interface For
Electron Transfer.
gi|188036315|pdb|3CXH|M Chain M, Structure Of Yeast Complex Iii With Isoform-2 Cytochrome C
Bound And Definition Of A Minimal Core Interface For
Electron Transfer
Length = 352
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 166 IARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDRE 225
I+ ++V G+RY T D G+ H+L +T + ++R + GG+ +T+DRE
Sbjct: 12 ISTLAVKVHGGSRYATKD--GVAHLLNRFNFQNTNTRSALKLVRESELLGGTFKSTLDRE 69
Query: 226 GIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD-LTPRLKYD 269
I ++ ++ + LA V+ KT F+P E+++ + P +YD
Sbjct: 70 YITLKATFLKDDLPYYVNALADVLYKTAFKPHELTESVLPAARYD 114
>gi|349581988|dbj|GAA27145.1| K7_Qcr2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 368
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 166 IARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDRE 225
I+ ++V G+RY T D G+ H+L +T + ++R + GG+ +T+DRE
Sbjct: 28 ISTLAVKVHGGSRYATKD--GVAHLLNRFNFQNTNTRSALKLVRESELLGGTFKSTLDRE 85
Query: 226 GIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD-LTPRLKYD 269
I ++ ++ + LA V+ KT F+P E+++ + P +YD
Sbjct: 86 YITLKATFLKDDLPYYVNALADVLYKTAFKPHELTESVLPAARYD 130
>gi|11993905|gb|AAG42149.1| mitochondrial processing peptidase alpha-chain precursor [Dactylis
glomerata]
Length = 505
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 74 ARGKALLKRHLADSFETLDSTVDSVVRQAVTTGVVKSLPDLLAEVEAVSSSDVSAKRSFA 133
A G LK+H AD+ ++ +R A T+ +S L+ + SS + FA
Sbjct: 5 ASGLGALKKHGADT-----QMLNMAIRSASTSVAQRSSGGFLSWLTGARSSALPPP-DFA 58
Query: 134 AQPATKALFSPD------IQSGTSYNKVKVVSVNETSPIARISVAF--KAGARYETPDNL 185
T PD + T N VK+ S ETSP + SV G+ YE P+ L
Sbjct: 59 LAGVTIPDPLPDHVEPAKTKITTLSNGVKIAS--ETSPGSSCSVGVYVNCGSVYEAPETL 116
Query: 186 GITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFL 245
G T +L A +T + ++R + GG+ A+ RE Y+ A++ + + + L
Sbjct: 117 GATQLLNKLAFTTTRNRSQLRVVREIGAIGGNAKASSTRELTSYSYGALKTYMPEMVEVL 176
Query: 246 ASVVGKTEFRPWEVSDLTPRLK 267
V WEV + +LK
Sbjct: 177 VDCVRNPALLDWEVKEEITKLK 198
>gi|358057581|dbj|GAA96579.1| hypothetical protein E5Q_03249 [Mixia osmundae IAM 14324]
Length = 466
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 169 ISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIV 228
I+VA KAG+RYE+ GI HV ++ +T + + I+R + GG L A+++R+ +
Sbjct: 66 ITVAIKAGSRYESEP--GIAHVFKNMVFKNTTKRSALRIVRETELYGGVLTASLNRDSLF 123
Query: 229 YTIEAVRKEIGHVHKFLASVVGKTEFRPWE-VSDLTPRL 266
T E ++ + + + L V+ + F+ +E + ++ P++
Sbjct: 124 LTAEFLKGDEAYFTELLGDVITASTFQAFEYIENVVPQI 162
>gi|187233676|gb|ACD01102.1| ubiquinol cytochrome c reductase [Adineta vaga]
Length = 208
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%)
Query: 197 LSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRP 256
+ST+ + G+ +++++ G + RE ++Y+IE +R E+ H +FL +V F+P
Sbjct: 1 MSTKYVSRHGLTKNLERLGANFKCIQTREQMIYSIEGLRNELTHGAQFLIPIVCYPMFKP 60
Query: 257 WEVSDLTPRLKYDR 270
+E+ D RL+ D
Sbjct: 61 YEIHDEHERLEVDH 74
>gi|348686694|gb|EGZ26508.1| hypothetical protein PHYSODRAFT_320443 [Phytophthora sojae]
Length = 526
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 53/105 (50%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQA 214
++V+S A + + AG+R+E D++G++H+L ST +H ++ ++
Sbjct: 93 LRVISQETYGQAATLGIFIDAGSRFEDDDSVGVSHLLEHLGFKSTTSRSHAQLVHEIEDI 152
Query: 215 GGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
G ++ RE I+YTI+ +R + + LA + + P E+
Sbjct: 153 GALTTSSCGREQIIYTIDLLRDNVEKGLELLADAILNVDLVPEEM 197
>gi|401623139|gb|EJS41247.1| qcr2p [Saccharomyces arboricola H-6]
Length = 368
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 164 SPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVD 223
S ++ +++ G+RY T D G+ H+L +T + ++R + GG+ +T+D
Sbjct: 26 SKVSTLAIKVHGGSRYATKD--GVAHLLNRFNFQNTNNRSALKLVRESELLGGTFKSTLD 83
Query: 224 REGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD-LTPRLKYD 269
RE I ++ ++ + LA V+ KT F+P E+ + + P +YD
Sbjct: 84 REYITLQATFLKNDLPYYVNALADVLYKTAFKPHELPESVLPAARYD 130
>gi|342320788|gb|EGU12727.1| Exocyst complex component EXO84 [Rhodotorula glutinis ATCC 204091]
Length = 1176
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQA 214
VKV S + S + ISV K+GARYE G+ HVL+++ +T + + ++R +
Sbjct: 37 VKVASSEDGSRTSSISVVVKSGARYEPAP--GVAHVLKNSVFKATNKRSQIRLVRETEAL 94
Query: 215 GGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG L ++ RE +V T E ++ + + + L V + +F +E ++
Sbjct: 95 GGVLSTSLSREHLVLTAEFLKGDEAYFAEALGDAVTQPKFPVYEYNE 141
>gi|154277092|ref|XP_001539391.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150414464|gb|EDN09829.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 437
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYE-TPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQ 213
VK+ + TSP +S+ KAG+RY+ P G +++L A ST + + I R +
Sbjct: 19 VKIANREFTSPTTTLSLVAKAGSRYQPFP---GYSNLLEKFAFKSTSKRSALRITRESEL 75
Query: 214 AGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRL-KYDR 270
GG L AT RE +V + + + K++ + + LA V+ KT + E+ +L L KY +
Sbjct: 76 LGGELAATYSRENVVLSAKFLSKDLPYYTELLADVITKTNYSQHELDELIMNLVKYSQ 133
>gi|426193749|gb|EKV43682.1| ubiquinol-cytochrome C reductase complex subunit 2 [Agaricus
bisporus var. bisporus H97]
Length = 423
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 15/146 (10%)
Query: 125 DVSAKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDN 184
+V+ +R FA + D SG VKV SV+ P + ++V KAG R+++ D
Sbjct: 7 NVATRRGFATAVS-------DAASG-----VKVASVDFGHPTSAVTVLVKAGPRFQSKD- 53
Query: 185 LGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKF 244
G+++VL++ A ST + + G +R + GG L A + RE + T E +R +
Sbjct: 54 -GLSNVLKNFAFKSTGKRSALGTVREAELYGGMLSANLTREHLALTAEFLRGDEAFFVDV 112
Query: 245 LASVVGKTEFRPWEVSD-LTPRLKYD 269
L+S V F E+ + + P ++ D
Sbjct: 113 LSSFVTSARFTRHELQEYVNPLVESD 138
>gi|409075807|gb|EKM76183.1| QCR2 subunit 2 of the ubiquinol cytochrome-c reductase complex
[Agaricus bisporus var. burnettii JB137-S8]
Length = 423
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 15/146 (10%)
Query: 125 DVSAKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDN 184
+V+ +R FA + D SG VKV SV+ P + ++V KAG R+++ D
Sbjct: 7 NVATRRGFATAVS-------DAASG-----VKVASVDFGHPTSAVTVLVKAGPRFQSKD- 53
Query: 185 LGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKF 244
G+++VL++ A ST + + G +R + GG L A + RE + T E +R +
Sbjct: 54 -GLSNVLKNFAFKSTGKRSALGTVREAELYGGMLSANLTREHLALTAEFLRGDEAFFVDV 112
Query: 245 LASVVGKTEFRPWEVSD-LTPRLKYD 269
L+S V F E+ + + P ++ D
Sbjct: 113 LSSFVTSARFTRHELQEYVNPLVESD 138
>gi|363750235|ref|XP_003645335.1| hypothetical protein Ecym_2822 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888968|gb|AET38518.1| Hypothetical protein Ecym_2822 [Eremothecium cymbalariae
DBVPG#7215]
Length = 366
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 154 KVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQ 213
K+ + + + + ++ ++V G+RY D G+ H+L +T + ++R +
Sbjct: 15 KLSITAKDGSGKVSTLAVRVHGGSRYADKD--GLAHLLSRFNFHNTGNKSALRLVRESEL 72
Query: 214 AGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD-LTPRLKYDRLT 272
GG +++VDRE I + +++++ + LA+V+ KT FRP+E+ + + P ++D L
Sbjct: 73 LGGKFHSSVDREYITLSATFLKEDLPYFVNALANVLYKTSFRPYELPESVLPAAEHDLLV 132
>gi|5902674|gb|AAC79673.2| putative cytochrome bc-1 complex core protein [Haematobia irritans
irritans]
Length = 246
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 4 KEALAFAVLKYALGAGPAKTGKNQRSTNSKGLSRTPG---------RESLDESHHF---- 50
KEALAFAVL+ ALGAGPA K LS G S ++ F
Sbjct: 76 KEALAFAVLQCALGAGPATKRGAVNGPFGKALSSALGDANARFAALNASYADAGLFGFVV 135
Query: 51 -----SPPQALQASIDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTT 105
+ +A+ A ++ + D+ RGKALLK + D++ T S + + QAV T
Sbjct: 136 STEAQNAGKAVDALTRALKSGSVSAEDVNRGKALLKVAVLDAYSTDSSLIAEMGLQAVLT 195
Query: 106 GVVKSLPDLLAEVEAVSSSDV 126
V+S L++ ++ V+ DV
Sbjct: 196 KDVQSADALVSAIDGVTQQDV 216
>gi|300120686|emb|CBK20240.2| Mitochondrial-processing peptidase (subunit ?) [Blastocystis
hominis]
Length = 465
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 52/127 (40%)
Query: 130 RSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITH 189
R+F++ + P + T N V+V+S + V AG+RYE N G+ H
Sbjct: 20 RAFSSSLPSYLFNVPATEVTTLPNGVRVLSQGGYGKTCSVGVFIDAGSRYENDANNGVAH 79
Query: 190 VLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
L A TE I + V+ G L A RE VY K+IG L ++
Sbjct: 80 FLEHLAFKGTERRNRVDIEKEVEDMGAHLNAYTSREQTVYYSRCFTKDIGRAMDILGDIL 139
Query: 250 GKTEFRP 256
+ + P
Sbjct: 140 LHSRYDP 146
>gi|323302530|gb|EGA56338.1| Qcr2p [Saccharomyces cerevisiae FostersB]
Length = 201
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 166 IARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDRE 225
I+ ++V G+RY T D G+ H+L +T + ++R + GG+ +T+DRE
Sbjct: 28 ISTLAVKVHGGSRYATKD--GVAHLLNRFNFQNTNTRSALKLVRESELLGGTFKSTLDRE 85
Query: 226 GIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD-LTPRLKYD 269
I ++ ++ + LA V+ KT F+P E+++ + P +YD
Sbjct: 86 YITLKATFLKDDLPYYVNALADVLYKTAFKPHELTESVLPAARYD 130
>gi|125529245|gb|EAY77359.1| hypothetical protein OsI_05342 [Oryza sativa Indica Group]
Length = 434
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N V+V S + P A + V +G+ YET + G++H+L + T +H I++ V+
Sbjct: 71 NGVRVASEDLPGPSACVGVFVDSGSVYETAETAGVSHLLERLSFKDTAHRSHLQIVQDVE 130
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEF 254
GG++ A+ RE VY+ E ++ + + L V F
Sbjct: 131 ATGGNIGASASREQTVYSYETLKAYLPQAIEVLIDCVRNPLF 172
>gi|291510270|gb|ADE10091.1| peptidase M16 [Tremella fuciformis]
Length = 441
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
Query: 154 KVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQ 213
KV V V + + I+V KAG RYE G+ HVL+S A ST + I R +
Sbjct: 32 KVAGVEVGQPAATTSITVVVKAGTRYE--PKPGVAHVLKSFAYKSTGNASALKIARETEL 89
Query: 214 AGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLT-PRLKYDRLT 272
GG+L A + RE + T E ++ + H LASV+ T + P E S+L P ++ + L+
Sbjct: 90 YGGTLSAALGREHLYLTAEFLKGDEDHFLSLLASVLSSTHYYPHEYSELVLPTVEAEALS 149
Query: 273 RPSQGN 278
+ N
Sbjct: 150 ALASPN 155
>gi|164427496|ref|XP_956122.2| hypothetical protein NCU03559 [Neurospora crassa OR74A]
gi|52788223|sp|O60044.2|QCR2_NEUCR RecName: Full=Cytochrome b-c1 complex subunit 2, mitochondrial;
AltName: Full=Complex III subunit 2; AltName: Full=Core
protein II; AltName: Full=Ubiquinol-cytochrome-c
reductase complex core protein 2; Flags: Precursor
gi|18376040|emb|CAD21046.1| UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2 PRECURSOR
[Neurospora crassa]
gi|157071767|gb|EAA26886.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 454
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Query: 150 TSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIR 209
T+ VKV S +++ P R++V KAG RYE G+T L A +T + T I R
Sbjct: 42 TTIAGVKVASRDDSGPTTRLAVVAKAGTRYEPLP--GLTVGLEEFAFKNTNKRTALRITR 99
Query: 210 HVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYD 269
+ GG L A RE +V +R+++ + + LA V+ +T++ E +L ++
Sbjct: 100 ESELLGGQLQAYHTREAVVLQASFLREDLPYFTELLAEVISETKYTTHEFHELVENCIHE 159
Query: 270 R 270
+
Sbjct: 160 K 160
>gi|402220513|gb|EJU00584.1| ubiquinol-cytochrome C reductase complex core protein 2
[Dacryopinax sp. DJM-731 SS1]
Length = 421
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 16/135 (11%)
Query: 128 AKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGI 187
+ R++A P+ +F+ D P + I+V KAG+R+E + GI
Sbjct: 16 SSRTYATAPSGPTVFAQD----------------NGQPTSSITVLVKAGSRFEPEGHAGI 59
Query: 188 THVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLAS 247
HVL+ + S++E + +R + GG L AT+ RE + T + +R + G LAS
Sbjct: 60 AHVLKHFSFKSSKERSALRTVREAELYGGILSATLTREYLALTADFLRGDEGFFLPLLAS 119
Query: 248 VVGKTEFRPWEVSDL 262
V +F E+ +L
Sbjct: 120 SVVSPKFVNHELHEL 134
>gi|336275206|ref|XP_003352356.1| hypothetical protein SMAC_07797 [Sordaria macrospora k-hell]
gi|380088460|emb|CCC13615.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 444
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 16/136 (11%)
Query: 127 SAKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLG 186
+A+R FAA + A + P +G VKV S +++ P R++V KAG RYE G
Sbjct: 23 TAQRGFAAAASPAASYEPTTIAG-----VKVASRDDSGPTTRLAVVAKAGTRYEPLP--G 75
Query: 187 ITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLA 246
+T+ T + T I+R + GG L A RE +V +R+++ + + LA
Sbjct: 76 LTN---------TNKRTALRIVRESELLGGQLQAYHTREALVLQASFLREDLPYFTELLA 126
Query: 247 SVVGKTEFRPWEVSDL 262
V+ +T++ E +L
Sbjct: 127 EVISETKYTTHEFHEL 142
>gi|323335235|gb|EGA76525.1| Qcr2p [Saccharomyces cerevisiae Vin13]
Length = 212
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 166 IARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDRE 225
I+ ++V G+RY T D G+ H+L +T + ++R + GG+ +T+DRE
Sbjct: 28 ISTLAVKVHGGSRYATKD--GVAHLLNRFNFQNTNTRSALKLVRESELLGGTFKSTLDRE 85
Query: 226 GIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD-LTPRLKYD 269
I ++ ++ + LA V+ KT F+P E+++ + P +YD
Sbjct: 86 YITLKATFLKDDLPYYVNALADVLYKTAFKPHELTESVLPAARYD 130
>gi|384486934|gb|EIE79114.1| hypothetical protein RO3G_03819 [Rhizopus delemar RA 99-880]
Length = 539
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N ++V S N + + V AG+RYET G++H+L A ST+ + I+ ++
Sbjct: 64 NGIRVTSENTPGHFSAVGVYVDAGSRYETAKVRGVSHILDRLAFKSTKNRSADEIVAELE 123
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG++ + RE I+Y +++ V + VV P EV +
Sbjct: 124 SLGGNIMCSSSRESIMYQSAIFSQDLSRVLSLFSDVVCHPTIDPLEVEE 172
>gi|213402503|ref|XP_002172024.1| cytochrome b-c1 complex subunit 2 [Schizosaccharomyces japonicus
yFS275]
gi|212000071|gb|EEB05731.1| cytochrome b-c1 complex subunit 2 [Schizosaccharomyces japonicus
yFS275]
Length = 437
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 169 ISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIV 228
+SVA AG+RY+ N G+ H+L + +TE+ + I+R + GG L + V RE I+
Sbjct: 52 LSVAIAAGSRYQ--PNYGVAHLLEKYSYKTTEKRSALRIVRESELLGGHLESKVTREHII 109
Query: 229 YTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
T + + + + ++ VVG +F P ++ +
Sbjct: 110 LTARFLNEYLDYYADMMSEVVGHPKFLPHQLEE 142
>gi|393213227|gb|EJC98724.1| mitochondrial processing peptidase [Fomitiporia mediterranea
MF3/22]
Length = 526
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%)
Query: 120 AVSSSDVSAKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARY 179
AVSS+ A RS + A +P +Q T NK++V + A + + AG+RY
Sbjct: 4 AVSSAARQALRSRRTLHSQSAPSAPPVQITTLPNKLRVATEAAPGHFAGVGLYVDAGSRY 63
Query: 180 ETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVY 229
ETP+N G++H L A ST + + + GG + + RE ++Y
Sbjct: 64 ETPENSGVSHFLDRLAFKSTRARSDLDMSSAIHALGGQIQCSSSREAMMY 113
>gi|171690078|ref|XP_001909971.1| hypothetical protein [Podospora anserina S mat+]
gi|170944994|emb|CAP71105.1| unnamed protein product [Podospora anserina S mat+]
Length = 448
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 62/139 (44%), Gaps = 25/139 (17%)
Query: 130 RSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITH 189
R FAA + KA + P +G VKV S ++ P R++V KAG RYE L +
Sbjct: 21 RGFAAAASPKASYEPTTIAG-----VKVASRDDNGPTTRLAVVAKAGTRYEPLPGLTV-- 73
Query: 190 VLRSAAGLSTEEFTH----------FGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIG 239
GL EEF + I R + GG L A RE +V +R+++
Sbjct: 74 ------GL--EEFAYKAENTNKRSALRITREAELLGGQLTAYHTREALVLQASFLREDLP 125
Query: 240 HVHKFLASVVGKTEFRPWE 258
+ + LA VV +T + E
Sbjct: 126 YFTELLAEVVSQTRYTTHE 144
>gi|115442443|ref|NP_001045501.1| Os01g0966300 [Oryza sativa Japonica Group]
gi|57900170|dbj|BAD88255.1| putative mitochondrial processing peptidase [Oryza sativa Japonica
Group]
gi|113535032|dbj|BAF07415.1| Os01g0966300 [Oryza sativa Japonica Group]
gi|125573439|gb|EAZ14954.1| hypothetical protein OsJ_04885 [Oryza sativa Japonica Group]
gi|215706471|dbj|BAG93327.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 490
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N V+V S + P A + V +G+ YET + G++H+L + T +H I++ V+
Sbjct: 71 NGVRVASEDLPGPSACVGVFVDSGSVYETAETAGVSHLLERLSFKDTAHRSHLQIVQDVE 130
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEF 254
GG++ A+ RE VY+ E ++ + + L V F
Sbjct: 131 ATGGNIGASASREQTVYSYETLKAYLPQAIEVLIDCVRNPLF 172
>gi|448086180|ref|XP_004196039.1| Piso0_005480 [Millerozyma farinosa CBS 7064]
gi|359377461|emb|CCE85844.1| Piso0_005480 [Millerozyma farinosa CBS 7064]
Length = 507
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 66/130 (50%)
Query: 140 ALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLST 199
+L S +++ T N ++VV+ + + + AG+R+E P G++H++ A ST
Sbjct: 26 SLDSQNVEMTTLANGLRVVTDSTPGHFSALGAYVDAGSRFEDPAKSGVSHIMDRLAWRST 85
Query: 200 EEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
++F ++ ++ + GG+ + RE ++Y K++ + + +A V + + EV
Sbjct: 86 QKFGGIEMMENLSKLGGNYMCSAQRESVIYQASVFNKDVPKMFECIAQTVREPKITDQEV 145
Query: 260 SDLTPRLKYD 269
+ + +Y+
Sbjct: 146 VEASQTAEYE 155
>gi|391329861|ref|XP_003739385.1| PREDICTED: LOW QUALITY PROTEIN: mitochondrial-processing peptidase
subunit beta-like [Metaseiulus occidentalis]
Length = 474
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+ + T N V+V + N P A + V AG+RYET G+ H L A TE+ +
Sbjct: 38 PETRVTTLSNGVRVATENNGGPTATVGVWIDAGSRYETEKXNGVAHFLEHMAFKGTEKRS 97
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASV 248
+ V+ AG L A RE VY + + K++ +A +
Sbjct: 98 QTDLELEVENAGMHLNAYTSREQTVYYAKCLTKDVAKAVDIIADI 142
>gi|254582475|ref|XP_002498969.1| ZYRO0E00528p [Zygosaccharomyces rouxii]
gi|238942543|emb|CAR30714.1| ZYRO0E00528p [Zygosaccharomyces rouxii]
Length = 369
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 166 IARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDRE 225
++ ++V G+RY T D GI+H+L +T + ++R + GG + VDRE
Sbjct: 29 VSSLAVKVHGGSRYATKD--GISHLLSRFNFHNTSGKSALRLVRESELLGGGFESKVDRE 86
Query: 226 GIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD-LTPRLKYD 269
I + +++++ + L +V+ KT FRP+E+ + + P K+D
Sbjct: 87 FITLSATFLKEDLPYYVNALGNVLYKTSFRPYELPESVLPAAKHD 131
>gi|116200167|ref|XP_001225895.1| hypothetical protein CHGG_08239 [Chaetomium globosum CBS 148.51]
gi|88179518|gb|EAQ86986.1| hypothetical protein CHGG_08239 [Chaetomium globosum CBS 148.51]
Length = 599
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 128 AKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGI 187
A+R +AA + KA + P +G VKV S ++ P R+++ KAG RYE G+
Sbjct: 24 AQRGYAAVASPKASYEPTTIAG-----VKVASRDDNGPTTRLAIVAKAGTRYEPLP--GL 76
Query: 188 THVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLAS 247
T+ T++ + I R + GG L A RE +V +R+++ + + LA
Sbjct: 77 TN---------TQKRSALRINRETELLGGQLNAYHTREALVLQANFLREDLPYFTELLAE 127
Query: 248 VVGKTEF 254
V+ +T +
Sbjct: 128 VLSQTRY 134
>gi|260811213|ref|XP_002600317.1| hypothetical protein BRAFLDRAFT_118286 [Branchiostoma floridae]
gi|229285603|gb|EEN56329.1| hypothetical protein BRAFLDRAFT_118286 [Branchiostoma floridae]
Length = 520
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 145 DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEF-T 203
D + T N +KV S N+ + V +G+R+E GI+H L A ST F
Sbjct: 58 DTKITTLENGLKVTSENKFGQFCTVGVLVDSGSRHEVAFPSGISHFLEKLAFNSTARFGN 117
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
I++ +++ GG R+ I+Y + A RKE+ V L+ VV K E+ D
Sbjct: 118 RDDILQQLEKYGGICDCQSSRDTIMYAVSADRKEVDPVVSLLSDVVLKPNITELEIED 175
>gi|167533403|ref|XP_001748381.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773193|gb|EDQ86836.1| predicted protein [Monosiga brevicollis MX1]
Length = 465
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 4/166 (2%)
Query: 115 LAEVEAVSSSDVSAKRSFAAQPATKALFSPDIQS--GTSYNKVKVVSVNETSPIAR-ISV 171
+A + + +S VSA +F P+ P S T N V++ + +A +++
Sbjct: 14 VAAAQRLYASAVSATDAFPGTPSVTGTV-PAFGSIETTRLNNGVVIATQDNGGVASAMTI 72
Query: 172 AFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTI 231
A AG+R ET G TH LR+ A +T++ + I R + G L AT R+ + Y
Sbjct: 73 AVGAGSRNETAATFGATHFLRNLAFTTTQQRSAVKITRESELRGAQLSATSARDHLQYNA 132
Query: 232 EAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDRLTRPSQG 277
+R + V + +A V W V+ R+ D + G
Sbjct: 133 RFLRSDTAFVSELVAETVATPSLEEWVVAGQRARVSGDVAAMAANG 178
>gi|50288743|ref|XP_446801.1| hypothetical protein [Candida glabrata CBS 138]
gi|52783487|sp|Q6FSJ3.1|QCR2_CANGA RecName: Full=Cytochrome b-c1 complex subunit 2, mitochondrial;
AltName: Full=Complex III subunit 2; AltName: Full=Core
protein II; AltName: Full=Ubiquinol-cytochrome-c
reductase complex core protein 2; Flags: Precursor
gi|49526109|emb|CAG59728.1| unnamed protein product [Candida glabrata]
Length = 364
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 166 IARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDRE 225
++ + V AG+RY D GI H+L +T + ++R + GG +TVDRE
Sbjct: 26 LSVLRVKVHAGSRYANKD--GIAHLLSRFNFQNTNTKSALRLVRESELLGGCTKSTVDRE 83
Query: 226 GIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD-LTPRLKYD 269
I +++ + + L++V+ KT FRP E+ + + P KYD
Sbjct: 84 YITLEARFLKENLPYYVNALSNVLYKTSFRPHELPESVIPAAKYD 128
>gi|451820986|ref|YP_007457187.1| putative zinc-dependent protease [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451786965|gb|AGF57933.1| putative zinc-dependent protease [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 413
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%)
Query: 145 DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTH 204
D++ N ++V+++N+ S IA I++ K GA YE GI+H + TE
Sbjct: 7 DVKRHILNNGLEVITINKDSQIAAINLGVKVGALYENMAEKGISHFIEHTVFKGTETRND 66
Query: 205 FGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
+ ++ GG A D + VYTI + +E + + L ++ +F E+
Sbjct: 67 EQLNEELEALGGEYNAYTDYDVTVYTISCLMEEFENAVELLGDMIINPKFEAEEI 121
>gi|444315371|ref|XP_004178343.1| hypothetical protein TBLA_0A10460 [Tetrapisispora blattae CBS 6284]
gi|387511382|emb|CCH58824.1| hypothetical protein TBLA_0A10460 [Tetrapisispora blattae CBS 6284]
Length = 486
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 49/97 (50%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N V V + N + + + AG+R+ETP+ +G TH+L A ST+ ++ I + ++
Sbjct: 24 NGVTVATSNTKGHFSAVGLYMHAGSRFETPETIGCTHLLDRLAFKSTQNYSGKDISQKLE 83
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
GG+ RE ++Y +++ + K ++ V
Sbjct: 84 LLGGNYQCISSRETMIYQASVFNQDVDKMLKLMSQTV 120
>gi|346469491|gb|AEO34590.1| hypothetical protein [Amblyomma maculatum]
Length = 480
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+ T N ++V + + +P + V AG+RYET N G+ H L A T + +
Sbjct: 43 PETVVTTLDNGMRVATEDSGNPTCTVGVWIDAGSRYETEKNNGVAHFLEHMAFKGTSKRS 102
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEF 254
+ V+ G L A RE VY + + K++ + LA ++ ++F
Sbjct: 103 QMDLELEVENMGAHLNAYTSREQTVYYAKCLSKDMPRAVEILADILQNSKF 153
>gi|401839666|gb|EJT42782.1| QCR2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 368
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Query: 151 SYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRH 210
S ++ V + + S ++ ++V G+RY T D G+ H+L +T + ++R
Sbjct: 13 SVRRLTVSARDAPSKVSTLAVKVHGGSRYATKD--GVAHLLNRFNFQNTNTRSALKLVRE 70
Query: 211 VQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD-LTPRLKYD 269
+ GG +T+DRE I ++ ++ + LA V+ KT F+P E+++ + P +YD
Sbjct: 71 SELLGGIFKSTLDREYITLKATFLKDDLPYYVNALADVLYKTAFKPHELTESVLPAARYD 130
>gi|298709805|emb|CBJ31604.1| Mitochondrial Processing Peptidase alpha subunit [Ectocarpus
siliculosus]
Length = 528
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 3/135 (2%)
Query: 130 RSFAAQPATK---ALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLG 186
R F P K AL P+ + T N ++V S + + AG+R ET N G
Sbjct: 118 RPFPGVPPLKPPGALKRPETLTTTLPNGLRVASQETYGALCTFGIVVNAGSRLETDLNTG 177
Query: 187 ITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLA 246
H+L A ST +H ++ ++ GG+ R+ ++Y ++ +R + + LA
Sbjct: 178 TCHLLELMAFKSTATRSHQQVVSEFEEMGGTTSTHGSRDQMLYCVDVLRDNLERAVELLA 237
Query: 247 SVVGKTEFRPWEVSD 261
+ P EV +
Sbjct: 238 DTLINPRVTPEEVEE 252
>gi|346471969|gb|AEO35829.1| hypothetical protein [Amblyomma maculatum]
Length = 581
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEF-THFGIIRHV 211
N ++V S N+ + V +G+RYE P GI+H L A ST EF +++ +
Sbjct: 73 NGLRVASHNKFGQFCTVGVVIDSGSRYEAPYPSGISHFLEKLAFNSTREFRDQDAVLQEL 132
Query: 212 QQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
++ GG R+ ++Y A + + V K L VV + F+ EV
Sbjct: 133 EKQGGICDCQGSRDTMIYAASADARGLDPVMKLLGDVVLRPLFKEEEV 180
>gi|298715851|emb|CBJ28316.1| Mitochondrial Processing Peptidase beta subunit (C-terminal region)
Mitochondrial Processing Peptida [Ectocarpus
siliculosus]
Length = 516
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%)
Query: 133 AAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLR 192
A++ + L P+ Q T N ++V S A + V AG+RYET +N G+ H L
Sbjct: 72 ASELPSYVLNCPETQVTTLPNGLRVASETSHGATASVGVWIDAGSRYETLENNGVAHFLE 131
Query: 193 SAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
A T + T + ++ G L A RE VY + ++++G + L+ ++
Sbjct: 132 HVAFKGTRKRTQTQLETEIEDMGAHLNAYTSREQTVYYAKVFKEDLGRGLEILSDIL 188
>gi|357126936|ref|XP_003565143.1| PREDICTED: mitochondrial-processing peptidase subunit alpha-like
[Brachypodium distachyon]
Length = 505
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N V+V S + P A + V +G+ +E + G+TH+L A T +H I++ V+
Sbjct: 82 NGVRVASEDIPGPSACVGVFVASGSIHEAGETTGVTHLLEKLAFKDTAHRSHLQIVQEVE 141
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEF 254
GG++ A+ RE +VY+ + ++ I + L V F
Sbjct: 142 ATGGNIGASASREQMVYSYDTLKAYIPQAVEVLLDCVRNPLF 183
>gi|448081698|ref|XP_004194952.1| Piso0_005480 [Millerozyma farinosa CBS 7064]
gi|359376374|emb|CCE86956.1| Piso0_005480 [Millerozyma farinosa CBS 7064]
Length = 507
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 54/105 (51%)
Query: 145 DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTH 204
+++ T N ++VV+ + + + AG+R+E P G++H++ A ST++F
Sbjct: 31 NVEMTTLANGLRVVTDSTPGHFSALGAYVDAGSRFEDPSKSGVSHIMDRLAWRSTQKFGG 90
Query: 205 FGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
++ ++ + GG+ + RE ++Y K++ + + +A V
Sbjct: 91 IEMMENLSKLGGNYMCSAQRESMIYQASVFNKDVPKMFECIAQTV 135
>gi|242006974|ref|XP_002424317.1| ubiquinol-cytochrome C reductase, core protein 1 [Pediculus humanus
corporis]
gi|212507717|gb|EEB11579.1| ubiquinol-cytochrome C reductase, core protein 1 [Pediculus humanus
corporis]
Length = 478
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 5/125 (4%)
Query: 130 RSFAAQPATKALFS-----PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDN 184
R A +PA L P T N +++ S + SP A + + AG+RYE +N
Sbjct: 26 RPLATKPAINGLQPYLANLPPTCVTTLENGLRIASEDTGSPTATVGLWIDAGSRYENEEN 85
Query: 185 LGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKF 244
G+ H L A TE+ + + ++ G L A RE V+ + +++++ +
Sbjct: 86 NGVAHFLEHMAFKGTEKRSQTDLELEIENLGAHLNAYTSREQTVFYAKCLKQDVSKALEI 145
Query: 245 LASVV 249
L+ ++
Sbjct: 146 LSDII 150
>gi|393219347|gb|EJD04834.1| hypothetical protein FOMMEDRAFT_132694 [Fomitiporia mediterranea
MF3/22]
Length = 423
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQA 214
++V +V+ P + ++ KAG+RYE G+++VL++ A T + + G +R +
Sbjct: 27 IRVAAVDNGQPTSAVTFLIKAGSRYEPKP--GLSNVLKNFAFKGTSKRSALGTVREAELV 84
Query: 215 GGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG L + + RE + T E +R + L+SV+ ++F PWE+S+
Sbjct: 85 GGVLSSRLTREHLALTAEFLRGDEALFVDVLSSVLSSSKFSPWELSE 131
>gi|328774181|gb|EGF84218.1| hypothetical protein BATDEDRAFT_34157 [Batrachochytrium
dendrobatidis JAM81]
Length = 462
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAA--GLSTEEFTHFGIIRHVQ 212
V V + + P + +++ AG+R++T D G H+L++ L + IR +
Sbjct: 59 VNVATYDHFGPASTLAIVVNAGSRFDTADAPGTAHMLKACLLRALPGDNLAR--TIREAE 116
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRL 266
G +L+A+V RE IV + +R ++ L S + F+P+E D P +
Sbjct: 117 LRGNTLHASVSREHIVLASDFLRDDLVDAVPTLVSHMFNRSFQPYEFLDAAPHV 170
>gi|169854407|ref|XP_001833878.1| ubiquinol-cytochrome C reductase complex core protein 2
[Coprinopsis cinerea okayama7#130]
gi|116505013|gb|EAU87908.1| ubiquinol-cytochrome C reductase complex core protein 2
[Coprinopsis cinerea okayama7#130]
Length = 425
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N VKV +V+ +P + ++V KAG+RYE+ G+ + L++ A ST + + G +R
Sbjct: 27 NGVKVAAVDNGTPTSSLTVLVKAGSRYESKQ--GVANALKNFAFKSTSKRSALGTVRESD 84
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD-LTPRLKYD 269
GG L +++ RE + T E +R + L S + +F E + + P ++ D
Sbjct: 85 LYGGVLTSSLGREHLALTAEFLRGDEAFFLDVLTSYITSAKFTRHEFQEYVAPLIESD 142
>gi|449690560|ref|XP_002169951.2| PREDICTED: mitochondrial-processing peptidase subunit beta-like,
partial [Hydra magnipapillata]
Length = 121
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 45/66 (68%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N ++V S++ +++++++ ++G+RYE+ N GI+ ++++AA ++ ++ + +R +Q
Sbjct: 56 NGIRVASIDNGGSVSKLAISLQSGSRYESVPNQGISQLVKNAAFMANKDRSALRTVREMQ 115
Query: 213 QAGGSL 218
GGSL
Sbjct: 116 DIGGSL 121
>gi|442752317|gb|JAA68318.1| Putative peptid [Ixodes ricinus]
Length = 499
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%)
Query: 141 LFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTE 200
L P+ + T N V+V + + +P + V AG+RYE N G+ H L A T
Sbjct: 39 LNVPETRVTTLDNGVRVATEDSGNPTCTVGVWIDAGSRYENEKNNGVAHFLEHMAFKGTS 98
Query: 201 EFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEF 254
+ + + V+ G L A RE VY + + K++ + L+ ++ ++F
Sbjct: 99 KRSQTDLELEVENMGAHLNAYTSREQTVYYAKCLSKDMPRAVEILSDILQNSKF 152
>gi|406697433|gb|EKD00692.1| peptidase M16 [Trichosporon asahii var. asahii CBS 8904]
Length = 424
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 155 VKVVSV-NETSP-IARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
VKV+ + N P + +++ K G+RYE +G HVL++ A +T E + +R +
Sbjct: 28 VKVLGIENGLRPATSSVTIVVKGGSRYE--PAVGTAHVLKNFAFKTTAEGSALKNVRKTE 85
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDL 262
GG L + + RE + E V + LASV+ T+F PWE S+L
Sbjct: 86 LYGGVLSSGLGREHLYLNAENVFVPL------LASVLSSTQFLPWEYSEL 129
>gi|401888777|gb|EJT52726.1| peptidase M16 [Trichosporon asahii var. asahii CBS 2479]
Length = 424
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 155 VKVVSV-NETSP-IARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
VKV+ + N P + +++ K G+RYE +G HVL++ A +T E + +R +
Sbjct: 28 VKVLGIENGLRPATSSVTIVVKGGSRYE--PAVGTAHVLKNFAFKTTAEGSALKNVRKTE 85
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDL 262
GG L + + RE + E V + LASV+ T+F PWE S+L
Sbjct: 86 LYGGVLSSGLGREHLYLNAENVFVPL------LASVLSSTQFLPWEYSEL 129
>gi|339319922|ref|YP_004679617.1| processing peptidase [Candidatus Midichloria mitochondrii IricVA]
gi|338226047|gb|AEI88931.1| processing peptidase [Candidatus Midichloria mitochondrii IricVA]
Length = 419
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%)
Query: 169 ISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIV 228
I V KAG+RYE N GI+H L A T+ T I GG+ A RE V
Sbjct: 24 IKVMVKAGSRYENETNNGISHFLEHMAFKGTKTRTATQIAEEFDMIGGNFNAYTSREKTV 83
Query: 229 YTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
Y + ++ ++ LA +V + F P E+
Sbjct: 84 YYAQVLKWDLALAVDVLADIVQNSIFEPEEI 114
>gi|403417393|emb|CCM04093.1| predicted protein [Fibroporia radiculosa]
Length = 425
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQA 214
VKV +V+ P + ++ KAG+R+E+ G+ H L+ A ST + + G IR +
Sbjct: 28 VKVAAVDNGEPTSAVTFLVKAGSRFESKP--GVAHALKGFAFRSTSKRSFLGTIREAELY 85
Query: 215 GGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDL 262
GG L +++ RE + T E +R + L+S V ++ E+ +
Sbjct: 86 GGVLSSSLTREHLALTAEFLRGDEAFFVDLLSSFVASAKYTRHELHEF 133
>gi|392587219|gb|EIW76553.1| LuxS MPP-like metallohydrolase [Coniophora puteana RWD-64-598 SS2]
Length = 424
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQA 214
VK+ + + P + ++ KAG+RYET G HVL++ A S + G +R +
Sbjct: 28 VKLAAADNGQPTSAVTFLLKAGSRYETKP--GAAHVLKNFAFRSAGSRSALGTVREAELY 85
Query: 215 GGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG L +++ RE I T E +R + LAS + ++F E S+
Sbjct: 86 GGVLTSSLSREHIALTAEFLRGDEQIFVDLLASTLTSSKFLGHEFSE 132
>gi|389742398|gb|EIM83585.1| mitochondrial processing peptidase [Stereum hirsutum FP-91666 SS1]
Length = 521
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%)
Query: 128 AKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGI 187
A+R+ A+ A+ +P +Q T N+++V + + + + + AG+RYE P G+
Sbjct: 9 ARRALHARHASTVPVNPPVQVTTLPNRIRVATESTPGHFSSVGLYVDAGSRYENPSTSGV 68
Query: 188 THVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVY 229
+H + A ST T + + GG + + RE I+Y
Sbjct: 69 SHFIDRMAFKSTSSMTDAEMSTAINALGGQIMCSSSRETIMY 110
>gi|320592960|gb|EFX05369.1| ubiquinol-cytochrome c reductase complex core protein [Grosmannia
clavigera kw1407]
Length = 449
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 8/138 (5%)
Query: 130 RSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITH 189
R+FAA + + F P T VKV+S + P +++V KAG RY++ G+T
Sbjct: 27 RAFAAAASGPSAFEP-----TDIAGVKVLSKDGQGPSTKLAVVAKAGTRYQSAP--GLTA 79
Query: 190 VLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
L A +T + + I R + GG L A RE +V +R+ + + + L+ VV
Sbjct: 80 GLEGFAFKNTSKRSALRITRESELLGGQLTAYHTREAVVLEASFLREHLPYFTELLSEVV 139
Query: 250 GKTEFRPWEV-SDLTPRL 266
T+F E+ D+ P L
Sbjct: 140 SLTKFTRHELEEDIEPVL 157
>gi|392563196|gb|EIW56375.1| ubiquinol-cytochrome C reductase complex core protein 2 [Trametes
versicolor FP-101664 SS1]
Length = 428
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQA 214
VKV + + + ++ KAG+R+E+ G+ H L++ A ST++ + G +R +
Sbjct: 30 VKVAAADNGEATSAVTFIVKAGSRFESKP--GVAHALKNYAFKSTDKRSSLGTVREAELY 87
Query: 215 GGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDL 262
GG L +++ RE + T E +R + L+S + T+F +E+++L
Sbjct: 88 GGVLSSSLSREHLAITAEFLRGDEAFFVDVLSSYLTSTKFTRYELTEL 135
>gi|299470234|emb|CBN79538.1| Mitochondrial Processing Peptidase beta subunit [Ectocarpus
siliculosus]
Length = 482
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 141 LFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTE 200
L +P+ Q N V+V + P+A ++V+ G+RYE+P+N G+ V+ ++A +E
Sbjct: 52 LTAPETQQAKLGNGVRVATEAGGGPVAALTVSVDLGSRYESPENNGVCSVIGASAFTGSE 111
Query: 201 EFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEF 254
+ GG TVDRE + Y+ ++ LA V T
Sbjct: 112 P--------AIAAMGGHFTQTVDREVMTYSATVAEADVPKAMAVLADAVKATSL 157
>gi|395329011|gb|EJF61400.1| LuxS/MPP-like metallohydrolase [Dichomitus squalens LYAD-421 SS1]
Length = 428
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQA 214
VKV + + P ++ KAG+RYE G+ H L++ A STE+ + G +R +
Sbjct: 31 VKVAAADNGEPTTAVTFLVKAGSRYE--PKPGVAHALKNYAFKSTEKRSTLGTVREAELY 88
Query: 215 GGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG L +++ RE + T E +R + L+S + +F +E+ +
Sbjct: 89 GGVLSSSLSREHLAVTAEFLRGDEAFFVDVLSSFLTSAKFTRYELQE 135
>gi|182416771|ref|ZP_02948166.1| peptidase, M16 family [Clostridium butyricum 5521]
gi|237669028|ref|ZP_04529012.1| peptidase M16 domain protein [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379351|gb|EDT76848.1| peptidase, M16 family [Clostridium butyricum 5521]
gi|237657376|gb|EEP54932.1| peptidase M16 domain protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 414
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 57/118 (48%)
Query: 142 FSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEE 201
+ D++ N ++V+++N+ + IA I++ K GA +E + GI+H + A T++
Sbjct: 4 LNFDVKRHILKNGLEVITINKNTQIASINIGIKVGALHEKINEKGISHFIEHALFKGTKK 63
Query: 202 FTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
+ ++ GG A D + VYTI + +E + L ++ EF E+
Sbjct: 64 RNDEELNEELEALGGEYNAYTDYDATVYTISCLAEEFENAVDLLGDMITNPEFDENEI 121
>gi|327405949|ref|YP_004346787.1| processing peptidase [Fluviicola taffensis DSM 16823]
gi|327321457|gb|AEA45949.1| processing peptidase [Fluviicola taffensis DSM 16823]
Length = 414
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +K+V ++ +SP+A + V AG+R+E +G+ H L + TE+ F I+ +
Sbjct: 13 NGLKLVYLHASSPVAHLGVTVLAGSRFEEDHEVGLAHFLEHSIFKGTEKRKAFHILSRLD 72
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
GG L A +E I V+ + + L+ + + F E+
Sbjct: 73 SVGGELNAYTTKEEICVYASFVKTHLNRAAELLSDIAINSNFPEKEI 119
>gi|427789437|gb|JAA60170.1| Putative peptid [Rhipicephalus pulchellus]
Length = 481
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+ + T N ++V + + +P + V AG+RYE N G+ H L A T + +
Sbjct: 44 PETVTTTLENGLRVATEDSGNPTCTVGVWIDAGSRYENERNNGVAHFLEHMAFKGTSKRS 103
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEF 254
+ V+ G L A RE VY + + K++ + LA ++ ++F
Sbjct: 104 QVDLELEVENMGAHLNAYTSREQTVYYAKCLSKDLPKAVEILADILQNSKF 154
>gi|242055715|ref|XP_002457003.1| hypothetical protein SORBIDRAFT_03g047030 [Sorghum bicolor]
gi|241928978|gb|EES02123.1| hypothetical protein SORBIDRAFT_03g047030 [Sorghum bicolor]
Length = 489
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +++ S + P A I +G+ YE+ + G++H+L A T+ +H I+ ++
Sbjct: 69 NGLRIASEDIPGPSACIGFFVNSGSVYESGETTGVSHMLERMAFKDTKHRSHLNIVHELE 128
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
AGG++ A+ RE +VY+ + ++ + + L + F EV
Sbjct: 129 LAGGNVGASASREQMVYSYDTLKGYMPEALEILIDCMRNPLFLQEEV 175
>gi|255732137|ref|XP_002550992.1| mitochondrial processing peptidase alpha subunit [Candida
tropicalis MYA-3404]
gi|240131278|gb|EER30838.1| mitochondrial processing peptidase alpha subunit [Candida
tropicalis MYA-3404]
Length = 510
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 60/126 (47%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P I+ T N +++V+ + + + AG+R+E P N G++H+ A STE++
Sbjct: 33 PHIEMTTLANGLRLVTDSTPGHFSALGAYIDAGSRFEDPKNPGLSHLHDRLAWKSTEKYN 92
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLT 263
++ ++ + GG+ + RE I+Y K++ + + ++ V +F E +
Sbjct: 93 GQEMLENLSKLGGNYMSASQRESIIYQSSVFNKDVEKMLELISQTVRYPKFTDQEFEECL 152
Query: 264 PRLKYD 269
Y+
Sbjct: 153 QTADYE 158
>gi|403216570|emb|CCK71067.1| hypothetical protein KNAG_0F04030 [Kazachstania naganishii CBS
8797]
Length = 360
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Query: 145 DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTH 204
++ G + + V + ++ + V AGARY D G++H+L +T +
Sbjct: 4 NLVRGNAVRRFTVAARESVGTVSSLEVKVHAGARYAALD--GVSHLLSRFNFQNTGAKSA 61
Query: 205 FGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWE-VSDLT 263
++R + GG L + VDRE I +++++ + + L +V+ KT F+P E V +
Sbjct: 62 LRLVRESELLGGQLSSHVDREFITLRAVFLQEQLPYYVEALGNVLYKTSFKPHELVESVL 121
Query: 264 PRLKYDRLT 272
P +YD L
Sbjct: 122 PAAQYDVLV 130
>gi|353238197|emb|CCA70151.1| probable mitochondrial processing peptidase alpha chain precursor
[Piriformospora indica DSM 11827]
Length = 530
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 153 NKVKVVSVNETSP--IARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRH 210
NK++V + ET+P + + V AG+RYE+P G++H+L A ST++ + +
Sbjct: 44 NKLRVAT--ETTPGHFSAVGVYIDAGSRYESPQYTGVSHILDRMAFKSTQQRSAGSMSTE 101
Query: 211 VQQAGGSLYATVDREGIVY 229
+ GG ++A+ RE I+Y
Sbjct: 102 IDSLGGQMFASSSRETIMY 120
>gi|198433490|ref|XP_002129466.1| PREDICTED: similar to Peptidase (mitochondrial processing) beta
[Ciona intestinalis]
Length = 476
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%)
Query: 130 RSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITH 189
R + A+ + +P+ + T N ++V S + + + AG+RYET DN G H
Sbjct: 27 RRMQSTQASVQVNTPETRVTTLANGLRVASEDSGLSTCTVGLWIDAGSRYETNDNNGTAH 86
Query: 190 VLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
L A T T + V+ G L A RE VY ++ K++ + LA ++
Sbjct: 87 FLEHMAFKGTANRTQLDLELEVENMGAHLNAYTSREQTVYYAKSFSKDLPQAVEILADII 146
>gi|393247543|gb|EJD55050.1| LuxS/MPP-like metallohydrolase [Auricularia delicata TFB-10046 SS5]
Length = 422
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 156 KVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAG 215
KV + + P A I+V KAG+RYE G+ HVL++ A +T + +R + +G
Sbjct: 27 KVAAADRGEPTASITVIAKAGSRYEPAP--GLAHVLKNFAFKTTGAKSALRTVREAELSG 84
Query: 216 GSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVS-DLTP 264
L +T+ RE ++ T E +R + + LA V T F E+S D+ P
Sbjct: 85 ALLSSTLTREHVILTAEFLRGDEQKFGELLAQNVSSTRFLAHELSEDVLP 134
>gi|340505325|gb|EGR31667.1| mitochondrial processing peptidase beta, putative [Ichthyophthirius
multifiliis]
Length = 778
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 52/115 (45%)
Query: 147 QSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFG 206
Q T N +++ S + SPI ++ K G+R ET + G H L T++ +
Sbjct: 347 QETTLENGIRICSESWPSPICTVAAFIKCGSRSETLETSGSAHFLEHLHFKGTQKRSRIQ 406
Query: 207 IIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
+ ++ GG L A RE YT+ + ++ + L+ ++ +++ V D
Sbjct: 407 LELEIENKGGQLNAYTSRENTCYTMNVFKNDLDWSLELLSDILQNSKYETSAVED 461
>gi|241043304|ref|XP_002407106.1| processing peptidase beta subunit, putative [Ixodes scapularis]
gi|215492104|gb|EEC01745.1| processing peptidase beta subunit, putative [Ixodes scapularis]
Length = 479
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+ + T N V+V + + +P + V AG+RYE N G+ H L A T + +
Sbjct: 42 PETRVTTLDNGVRVATEDSGNPTCTVGVWIDAGSRYENEKNNGVAHFLEHMAFKGTSKRS 101
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEF 254
+ V+ G L A RE VY + + K++ + L+ ++ ++F
Sbjct: 102 QTDLELEVENMGAHLNAYTSREQTVYYAKCLSKDMPRAVEILSDILQNSKF 152
>gi|3087842|emb|CAA70067.1| core protein II [Neurospora crassa]
Length = 454
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 150 TSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIR 209
T+ VKV S +++ P R++ KAG RYE G+T L A +T + T I R
Sbjct: 42 TTIAGVKVASRDDSGPTTRLAGVAKAGTRYEPLA--GLTVGLEEFAFKNTNKRTALRITR 99
Query: 210 HVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYD 269
+ GG L A RE +V +R+++ + + LA V+ +T++ E +L ++
Sbjct: 100 ESELLGGQLQAYHTREAVVLQASFLREDLPYFTELLAEVISETKYTTHEFHELVENCIHE 159
Query: 270 R 270
+
Sbjct: 160 K 160
>gi|146416123|ref|XP_001484031.1| hypothetical protein PGUG_03412 [Meyerozyma guilliermondii ATCC
6260]
gi|146391156|gb|EDK39314.1| hypothetical protein PGUG_03412 [Meyerozyma guilliermondii ATCC
6260]
Length = 450
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 41/74 (55%)
Query: 176 GARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVR 235
G+RYE P+ G++H++ A STE++T +I ++ + GG+ + RE ++Y
Sbjct: 3 GSRYEDPETPGLSHIVDRLAWRSTEKYTGVEMIENLTKLGGNFMCSAQRESMIYQASVFN 62
Query: 236 KEIGHVHKFLASVV 249
K++ + ++ +
Sbjct: 63 KDLDKMFDCISQTI 76
>gi|299115117|emb|CBN75484.1| Mitochondrial Processing Peptidase alpha subunit [Ectocarpus
siliculosus]
Length = 451
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Query: 123 SSDVSAKRSFAAQPATK--ALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYE 180
SS V + P+T A +P + T N KV++ A + V +G+R E
Sbjct: 28 SSLVPLDEEYMGSPSTMPAAASAPVTKVSTLSNGAKVITRESGQLGATVGVVVGSGSRDE 87
Query: 181 TPDNLGITHVLRSAAGLSTEEFTHFGIIRH--VQQAGGSLYATVDREGIVYTIEAVRKEI 238
+ G + L A TE + ++R V+ GG+L A+ RE +VY E
Sbjct: 88 SASQSGASLHLEGMAYKLTEARSSIRLMRQADVENVGGNLAASRGREKMVYVSECPPDSA 147
Query: 239 GHVHKFLASVVGKTEFRPWEVSDLTPRLKYDRLTR 273
G V LA V + PWE+SD + +L L R
Sbjct: 148 GTVLSALAESVVSPKIVPWEISDASAKLSEIILQR 182
>gi|306922620|gb|ADN07499.1| ubiquinol-cytochrome c reductase core protein [Microtus
ochrogaster]
gi|306922628|gb|ADN07506.1| ubiquinol-cytochrome c reductase core protein [Microtus
ochrogaster]
Length = 442
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+ Q N ++V S + P + V AG+RYET N G + L A T+
Sbjct: 46 PETQVSVLDNGLRVASEQSSHPTCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRP 105
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + V+ G L A RE Y I+A+ K++ V + LA +V
Sbjct: 106 GNALEKEVESMGAHLNAYTTREHTAYLIKALSKDLPKVVELLADIV 151
>gi|341039021|gb|EGS24013.1| mitochondrial ubiquinol-cytochrome-C reductase complex core protein
2-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 553
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 150 TSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIR 209
T+ VKV + ++ P R++V KAG RYE G+T L A +T + + I+R
Sbjct: 43 TTIAGVKVAARDDNGPTTRLAVVAKAGTRYEPLP--GLTVGLEEYAFKNTNKRSALRIVR 100
Query: 210 HVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEF 254
+ GG L + RE +V +R+++ + + LA VV +T +
Sbjct: 101 ESELLGGQLTSYHTREALVLQASFLREDLPYFAELLAEVVSQTRY 145
>gi|344231737|gb|EGV63619.1| LuxS/MPP-like metallohydrolase [Candida tenuis ATCC 10573]
gi|344231738|gb|EGV63620.1| hypothetical protein CANTEDRAFT_114590 [Candida tenuis ATCC 10573]
Length = 465
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 55/112 (49%)
Query: 143 SPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEF 202
+P I T N ++V++ + + + AG+++E P GI+H++ A STE++
Sbjct: 20 NPSINLSTLPNGLRVITDSTPGHFSALGAYIDAGSKFEDPSKPGISHLMDRLAWRSTEKY 79
Query: 203 THFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEF 254
T ++ + GG+ + RE ++Y K++ + ++ + + +F
Sbjct: 80 TGTEMMNALSNLGGNYMCSAQRESMIYQASVFNKDVDKMFDCISQTILEPKF 131
>gi|406867941|gb|EKD20978.1| hypothetical protein MBM_00091 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 502
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 124 SDVSAKRSFAAQPATKALFSPDIQSGTSY-------NKVKVVSVNETSPIARISVAFKAG 176
+ ++ +R A P+ + + I TS+ N VKV S + P +++V KAG
Sbjct: 52 AQLALRRQCCANPSNRRGLAASISGSTSFSYDTADVNGVKVASRDVAGPTTKLAVVAKAG 111
Query: 177 ARYETPDNL--GITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAV 234
RY+T L G+ H A +T + + I R + GG L + RE +V + +
Sbjct: 112 TRYQTAPGLASGLEHF----AFKNTHKRSALRITRESELLGGQLTSYHTREALVVEAKFL 167
Query: 235 RKEIGHVHKFLASVVGKTEFRPWEVSD-LTPRLKYDR 270
R ++ + + L V+ +T++ E + + P +K +
Sbjct: 168 RDDLPYFTELLGEVISQTKYTAHEYHEQIEPLIKLSQ 204
>gi|397699|dbj|BAA03007.1| mitochondrial processing protease [Rattus norvegicus]
Length = 487
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 1/130 (0%)
Query: 130 RSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITH 189
RS A P L P+ Q N ++V S N + + AG+RYE N G H
Sbjct: 41 RSTQAAPQV-VLNVPETQVTCLENGLRVASENSGISTCTVGLWIDAGSRYENEKNNGTAH 99
Query: 190 VLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
L A T++ + + ++ G L A RE VY +A K++ + LA ++
Sbjct: 100 FLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADII 159
Query: 250 GKTEFRPWEV 259
+ R E+
Sbjct: 160 QNSTLREAEI 169
>gi|312083400|ref|XP_003143846.1| processing peptidase subunit beta [Loa loa]
Length = 449
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 130 RSFAAQPATKALFS--PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGI 187
RS+++ P T ++ P+ + + N ++ + + + V AG+R+E N G+
Sbjct: 48 RSYSSVPTTSPVYLNIPETRVTSLTNGFRIATEDSQLLTTTVGVWIDAGSRFENDKNNGV 107
Query: 188 THVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLAS 247
H L A T + + + V+ G L A RE VY + +++ H + LA
Sbjct: 108 AHFLEHMAFKGTMKRSQSALELEVENMGAHLNAYTSREQTVYYAKCFSQDVDHAVEILAD 167
Query: 248 VVGKTEFRPWEV 259
++ ++ R E+
Sbjct: 168 ILRNSQLRSVEI 179
>gi|428179538|gb|EKX48409.1| hypothetical protein GUITHDRAFT_106014 [Guillardia theta CCMP2712]
Length = 446
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%)
Query: 140 ALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLST 199
A+ P + T N V+V++ ++ S +++ G+R ET + G +H ++ A +T
Sbjct: 16 AVSEPTTKVSTLPNGVRVITESKASMGCSMAIFCATGSRSETLETHGASHFMQHLAYKAT 75
Query: 200 EEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLA 246
+ +HFG+ R +++ GG + R+ I Y E + G + +A
Sbjct: 76 VDKSHFGLTRAIEKLGGHVACGSSRDCITYAGECLTSNAGQLFGLMA 122
>gi|254571889|ref|XP_002493054.1| hypothetical protein [Komagataella pastoris GS115]
gi|238032852|emb|CAY70875.1| hypothetical protein PAS_chr3_1223 [Komagataella pastoris GS115]
gi|328352934|emb|CCA39332.1| mitochondrial processing peptidase [Komagataella pastoris CBS 7435]
Length = 482
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYET--PDNLGITHVLRSAAGLSTEEFTHFGIIRH 210
N ++VV+ + + + AG+RYE+ P+ G +H++ A ST +F ++ +
Sbjct: 30 NGIRVVTDEAPGHFSAMGIFVDAGSRYESQFPELTGHSHIIDRLAFKSTSKFDGKSMVEN 89
Query: 211 VQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG+ RE ++Y K++ + + L+S V + F EVS+
Sbjct: 90 TNHLGGNFMCASSRESLIYQASVFNKDVDKMAEILSSTVKEPLFTEEEVSN 140
>gi|393904822|gb|EFO20221.2| processing peptidase subunit beta [Loa loa]
Length = 437
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 130 RSFAAQPATKALFS--PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGI 187
RS+++ P T ++ P+ + + N ++ + + + V AG+R+E N G+
Sbjct: 35 RSYSSVPTTSPVYLNIPETRVTSLTNGFRIATEDSQLLTTTVGVWIDAGSRFENDKNNGV 94
Query: 188 THVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLAS 247
H L A T + + + V+ G L A RE VY + +++ H + LA
Sbjct: 95 AHFLEHMAFKGTMKRSQSALELEVENMGAHLNAYTSREQTVYYAKCFSQDVDHAVEILAD 154
Query: 248 VVGKTEFRPWEV 259
++ ++ R E+
Sbjct: 155 ILRNSQLRSVEI 166
>gi|50303503|ref|XP_451693.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|52783483|sp|Q6CWJ6.1|QCR2_KLULA RecName: Full=Cytochrome b-c1 complex subunit 2, mitochondrial;
AltName: Full=Complex III subunit 2; AltName: Full=Core
protein II; AltName: Full=Ubiquinol-cytochrome-c
reductase complex core protein 2; Flags: Precursor
gi|49640825|emb|CAH02086.1| KLLA0B03564p [Kluyveromyces lactis]
Length = 360
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 166 IARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDRE 225
++ ++V G+RY D GI H+L +T + ++R + GG ++VDRE
Sbjct: 27 LSTLAVKVHGGSRY--ADKEGIAHLLSRFNFHNTGNKSALRLVRESELLGGKFESSVDRE 84
Query: 226 GIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD-LTPRLKYD 269
I +++++ + L +V+ KT FRP E+ + + P KYD
Sbjct: 85 YITLKATFLKEDLPYFVNALGNVLYKTSFRPHELPESVLPAAKYD 129
>gi|332373534|gb|AEE61908.1| unknown [Dendroctonus ponderosae]
Length = 475
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%)
Query: 131 SFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHV 190
S AA+P +L P + T N ++V + + S A + + AG+RYE N G+ H
Sbjct: 29 SAAAEPKQVSLNVPPTKVTTLSNGIRVATEDWGSQTATVGIWIDAGSRYENEKNNGVAHF 88
Query: 191 LRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ A T + T + ++ G L A RE VY + + K++ + L+ +V
Sbjct: 89 MEHMAFKGTGKRTQSQLELEIEDLGAQLNAYTSREQTVYYSKCLAKDVPKAVEILSDIV 147
>gi|293334231|ref|NP_001167727.1| uncharacterized protein LOC100381415 [Zea mays]
gi|223943635|gb|ACN25901.1| unknown [Zea mays]
gi|414878574|tpg|DAA55705.1| TPA: putative mitochondrial processing peptidase alpha subunit
family protein [Zea mays]
Length = 488
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N ++V + + P A I +G+ YE+ + G++H+L A T+ +H I+ ++
Sbjct: 68 NGLRVATEDVPGPSACIGFFVDSGSIYESGETTGVSHLLERMAFKDTKHRSHLNIVSELE 127
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
AGG++ A+ RE +VY+ + ++ + + L + F EV
Sbjct: 128 LAGGNVGASASREQMVYSYDTLKGYMPEALEILIDCMRNPLFLQEEV 174
>gi|84995550|ref|XP_952497.1| mitochondrial processing peptidase alpha subunit [Theileria
annulata strain Ankara]
gi|65302658|emb|CAI74765.1| mitochondrial processing peptidase alpha subunit, putative
[Theileria annulata]
Length = 525
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 3/127 (2%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +++ ++++ +++ AG+ +E N G+T ++ + A ST +H I+ V+
Sbjct: 100 NGLRIATLDKGGLDTHLALYVNAGSAHENDQNQGVTSMIENMAFHSTAHLSHLRTIKTVE 159
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDR-- 270
G ++ RE VY E +R+++ + L V F WE++ RL R
Sbjct: 160 TLGANVSCNAFREHTVYQAEFLRQDLPFLVNLLVGNVLFPRFLTWELAANKHRLSEKRNK 219
Query: 271 -LTRPSQ 276
L P Q
Sbjct: 220 VLENPDQ 226
>gi|224003835|ref|XP_002291589.1| probable mitochondrial processing peptidase [Thalassiosira
pseudonana CCMP1335]
gi|220973365|gb|EED91696.1| probable mitochondrial processing peptidase [Thalassiosira
pseudonana CCMP1335]
Length = 481
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%)
Query: 167 ARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREG 226
A + V AG+RYET N G H L A T + T + + ++ GG L A RE
Sbjct: 72 ATVGVWIDAGSRYETIHNNGAAHFLEHMAFKGTSKRTQYQLEVEIENMGGHLNAYTSREQ 131
Query: 227 IVYTIEAVRKEIGHVHKFLASVVGKTEFRP 256
VY + +K++ LA ++ +++ P
Sbjct: 132 TVYFAKVFKKDVPRAMDILADILLRSKLEP 161
>gi|268535716|ref|XP_002632993.1| C. briggsae CBR-MPPB-1 protein [Caenorhabditis briggsae]
Length = 459
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 48/116 (41%)
Query: 134 AQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRS 193
AQ K +F P+ T N +V + N A I V AG+RYE +N G H L
Sbjct: 18 AQAHAKPVFVPETIVTTLPNGFRVATENTGGSTATIGVFIDAGSRYENAENNGTAHFLEH 77
Query: 194 AAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
A T T G+ V+ G L A RE Y + +++ L+ ++
Sbjct: 78 MAFKGTPRRTRMGLELEVENIGAHLNAYTSRESTTYYAKCFTEKLDQSVDILSDIL 133
>gi|223949403|gb|ACN28785.1| unknown [Zea mays]
gi|414878572|tpg|DAA55703.1| TPA: putative mitochondrial processing peptidase alpha subunit
family protein [Zea mays]
Length = 489
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N ++V + + P A I +G+ YE+ + G++H+L A T+ +H I+ ++
Sbjct: 71 NGLRVATEDVPGPSACIGFFVDSGSIYESGETTGVSHLLERMAFKDTKHRSHLNIVSELE 130
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
AGG++ A+ RE +VY+ + ++ + + L + F EV
Sbjct: 131 LAGGNVGASASREQMVYSYDTLKGYMPEALEILIDCMRNPLFLQEEV 177
>gi|255083677|ref|XP_002508413.1| predicted protein [Micromonas sp. RCC299]
gi|226523690|gb|ACO69671.1| predicted protein [Micromonas sp. RCC299]
Length = 464
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 150 TSYNKVKVVSVNETSPIARISVAF--KAGARYETPDNLGITHVLRSAAGLSTEEFTHFGI 207
T N K+ S E +P A I+V +G+++E P G +H+L A +T T F +
Sbjct: 43 TLSNGAKIAS--EDTPGASIAVGMYVSSGSKWENPHVSGASHLLERMAWRATANRTAFRV 100
Query: 208 IRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLK 267
R + G +L A+ RE + YT++ +R + + L V + EV+ LK
Sbjct: 101 TREAEVIGANLLASASREQMAYTVDCLRTNLPEAVELLTDAVMNQKLTDHEVAAAAAALK 160
>gi|427781915|gb|JAA56409.1| Putative mitochondrial processing peptidase alpha subunit protein
[Rhipicephalus pulchellus]
Length = 534
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEF-THFGIIRHV 211
N ++V S N+ + V +G+RYE P G++H L A ST+EF +++ +
Sbjct: 75 NGLRVASQNKFGQFCTVGVVIDSGSRYEAPYPSGVSHFLEKLAFNSTQEFKDRDAVLQEL 134
Query: 212 QQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
++ GG R+ ++Y A + + V + L VV + F EV
Sbjct: 135 EKQGGICDCQGSRDTMIYAASADARGLSPVVRLLGDVVLRPLFHEDEV 182
>gi|219126648|ref|XP_002183564.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404801|gb|EEC44746.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 441
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 58/124 (46%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N ++VVS ++ + + G+R+E P G ++L ST + + I +Q
Sbjct: 3 NGIRVVSQETYGQVSTVGAVAQVGSRFELPYETGTCNLLEVLGFSSTAQLSGLEITNCLQ 62
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKYDRLT 272
GG+ + ++RE ++ I+ +R + LA + + +FR E+ D L++ L
Sbjct: 63 DWGGTPFVNLNREQSLHCIDLLRPNVEKAVALLAQALLEPQFRAEEIEDAKRALEFQALD 122
Query: 273 RPSQ 276
P +
Sbjct: 123 MPPE 126
>gi|414878573|tpg|DAA55704.1| TPA: putative mitochondrial processing peptidase alpha subunit
family protein [Zea mays]
Length = 388
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 47/83 (56%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N ++V + + P A I +G+ YE+ + G++H+L A T+ +H I+ ++
Sbjct: 71 NGLRVATEDVPGPSACIGFFVDSGSIYESGETTGVSHLLERMAFKDTKHRSHLNIVSELE 130
Query: 213 QAGGSLYATVDREGIVYTIEAVR 235
AGG++ A+ RE +VY+ + ++
Sbjct: 131 LAGGNVGASASREQMVYSYDTLK 153
>gi|336366396|gb|EGN94743.1| hypothetical protein SERLA73DRAFT_187799 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379064|gb|EGO20220.1| hypothetical protein SERLADRAFT_352076 [Serpula lacrymans var.
lacrymans S7.9]
Length = 424
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQA 214
VKV +V+ P + ++ KAG+RYET G+ H L++ A ST + + G +R +
Sbjct: 28 VKVAAVDNGQPTSAVTFLIKAGSRYETKP--GVAHALKNFAFKSTAKRSALGTVRESELY 85
Query: 215 GGSLYATVDREGIVYTIEAVRKE 237
GG L +++ RE + T E +R +
Sbjct: 86 GGVLSSSLSREHLALTAEFLRGD 108
>gi|302418967|ref|XP_003007314.1| cytochrome b-c1 complex subunit 2 [Verticillium albo-atrum
VaMs.102]
gi|261352965|gb|EEY15393.1| cytochrome b-c1 complex subunit 2 [Verticillium albo-atrum
VaMs.102]
Length = 457
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 16/140 (11%)
Query: 128 AKRSFAAQP---------ATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGAR 178
A++S AA+P A+ ++ P SG VKV + + P A+++V KAG R
Sbjct: 15 ARQSAAARPSQCRGLASAASSGIYEPSEASG-----VKVAARDSHGPTAKLAVVAKAGTR 69
Query: 179 YETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEI 238
Y+ G+ L S A +T++ + I R + GG L A RE +V +R ++
Sbjct: 70 YQPLP--GLAAALESFAFKNTQKRSALRITRESELLGGQLAAYHTREALVLEASFLRDDL 127
Query: 239 GHVHKFLASVVGKTEFRPWE 258
+ + L VV +T++ E
Sbjct: 128 PYYVELLGEVVSQTKYTTHE 147
>gi|238882566|gb|EEQ46204.1| hypothetical protein CAWG_04550 [Candida albicans WO-1]
Length = 522
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P I+ T N +++++ + + + AG+RYE P G++++ + STE+FT
Sbjct: 40 PHIELTTFANGLRLITDSTPGHFSAVGAYIDAGSRYEDPKAPGLSYLRDRLSWKSTEDFT 99
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKT 252
++ ++ + GG+ ++ RE ++Y K+I + ++G+T
Sbjct: 100 GQQMLENLSKLGGNYMSSAQRESMIYQASVFNKDIDR----MVGMIGQT 144
>gi|291243428|ref|XP_002741599.1| PREDICTED: mitochondrial processing peptidase beta subunit-like
[Saccoglossus kowalevskii]
Length = 481
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Query: 129 KRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGIT 188
KR A P T L P+ + T N ++V S + P + + AG+RYE N G+
Sbjct: 34 KRQVATYPET-LLNVPETKITTLDNGLRVASEDSGIPTCTVGLWIDAGSRYENAGNNGVA 92
Query: 189 HVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASV 248
H L T+ + + ++ G L A RE VY ++ K++ + LA +
Sbjct: 93 HFLEHMIFKGTKHRSQMELELEIENMGAHLNAYTSREQTVYYAKSFSKDLPKAVEILADI 152
Query: 249 V-----GKTEF 254
V G+TE
Sbjct: 153 VQNSTLGETEI 163
>gi|350645309|emb|CCD60024.1| mitochondrial processing peptidase beta-subunit (M16 family)
[Schistosoma mansoni]
Length = 474
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N ++ S N +P + V G+RYET N G+ H L A TE+ + + V+
Sbjct: 48 NGFRIASENWNTPTCTVGVWVDVGSRYETEHNNGVAHFLEHMAFKGTEKRSQQSLELEVE 107
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEF 254
G L A RE VY + +++ + L+ ++ ++F
Sbjct: 108 DKGAHLNAYTSREMTVYYAKCFVEDLPWAVELLSDILKNSKF 149
>gi|145548335|ref|XP_001459848.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427675|emb|CAK92451.1| unnamed protein product [Paramecium tetraurelia]
Length = 515
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 10/112 (8%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHV-----LRSAAGLSTEEFTHFGI 207
N ++VVS SP+A I+VA KAG+R+ET ++ G+++ LR S E+ +
Sbjct: 77 NGLRVVSELYNSPLASITVAVKAGSRFETLESSGVSNFISKLNLRGTTTKSREQ-----V 131
Query: 208 IRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
+ GGSL RE YT+ + E+ FL ++ + + P ++
Sbjct: 132 EAEIDYLGGSLKVKQGRELQTYTLTFLPNELERAVSFLGDILTNSLYSPAQI 183
>gi|256072211|ref|XP_002572430.1| mitochondrial processing peptidase beta-subunit (M16 family)
[Schistosoma mansoni]
Length = 482
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N ++ S N +P + V G+RYET N G+ H L A TE+ + + V+
Sbjct: 56 NGFRIASENWNTPTCTVGVWVDVGSRYETEHNNGVAHFLEHMAFKGTEKRSQQSLELEVE 115
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEF 254
G L A RE VY + +++ + L+ ++ ++F
Sbjct: 116 DKGAHLNAYTSREMTVYYAKCFVEDLPWAVELLSDILKNSKF 157
>gi|453087409|gb|EMF15450.1| LuxS/MPP-like metallohydrolase [Mycosphaerella populorum SO2202]
Length = 454
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +K+ S + P++ +++ +AG RYET G+ L A STE + I R +
Sbjct: 41 NGIKIASRDIAGPVSTVAIVSRAGTRYETWP--GLAEALDRYAFRSTERRSTLRIQRESE 98
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRP 256
G L + RE +V + +R ++ + + LA V T+F+P
Sbjct: 99 LLGAELQSWHSRENLVVGAKFLRDDLPYFLELLAEVATMTKFQP 142
>gi|440795464|gb|ELR16584.1| peptidase M16 family protein [Acanthamoeba castellanii str. Neff]
Length = 502
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 145 DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTH 204
++Q+ T + +KV +V+ P+A + + KAGAR+ET ++ G H LR A T +
Sbjct: 60 NVQTTTLDSGLKVTTVSSELPLAAVGLHVKAGARFETGESRGAAHFLRHLAFSRTSSRSP 119
Query: 205 FGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTP 264
+ R ++ A + + RE I Y+ + + +L V W + DL
Sbjct: 120 LTVTREMEVATAAFDVSASRENISYSGQLMP-------DYLEDYV-------WMLRDLMH 165
Query: 265 RLKYDRLTR 273
L ++ + R
Sbjct: 166 PLAWEYIVR 174
>gi|350645308|emb|CCD60023.1| mitochondrial processing peptidase beta-subunit (M16 family)
[Schistosoma mansoni]
Length = 430
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N ++ S N +P + V G+RYET N G+ H L A TE+ + + V+
Sbjct: 48 NGFRIASENWNTPTCTVGVWVDVGSRYETEHNNGVAHFLEHMAFKGTEKRSQQSLELEVE 107
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEF 254
G L A RE VY + +++ + L+ ++ ++F
Sbjct: 108 DKGAHLNAYTSREMTVYYAKCFVEDLPWAVELLSDILKNSKF 149
>gi|429328711|gb|AFZ80471.1| mitochondrial processing peptidase beta subunit, putative [Babesia
equi]
Length = 506
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 10/139 (7%)
Query: 121 VSSSDVSAKRSFAAQPAT----------KALFSPDIQSGTSYNKVKVVSVNETSPIARIS 170
V S++ +KR+ AT + L P + T N ++V +V + I
Sbjct: 36 VVYSNLQSKRTIVTDLATDLLKESKLPPQVLNQPPCHTTTLKNGLRVATVTMPGAASTIG 95
Query: 171 VAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYT 230
V +G+RYETP+ G H L T+ + + ++Q G L A RE Y
Sbjct: 96 VWIDSGSRYETPETNGAAHFLEHMIFKGTKSRSRLQLEEQIEQKGAHLNAYTSREQTGYY 155
Query: 231 IEAVRKEIGHVHKFLASVV 249
K+I + L+ ++
Sbjct: 156 ARCFNKDIPWCTELLSDIL 174
>gi|444510642|gb|ELV09664.1| Collagen alpha-1(VII) chain [Tupaia chinensis]
Length = 2239
Score = 45.8 bits (107), Expect = 0.027, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 47/106 (44%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+ Q N ++V S + P + V G+RYET N G + L A T+
Sbjct: 46 PETQVSQLDNGLRVASEQSSQPTCTVGVWIDVGSRYETEKNNGAGYFLEHLAFKGTKNRP 105
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + V+ G L A RE Y I+A+ K++ + LA +V
Sbjct: 106 GSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIV 151
>gi|339256730|ref|XP_003370241.1| peptidase, M16 family [Trichinella spiralis]
gi|316965640|gb|EFV50329.1| peptidase, M16 family [Trichinella spiralis]
Length = 374
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+ + T N +V S N P I V AG+RYET N G+ H L A T + +
Sbjct: 45 PETKVSTLSNGFRVASENSGLPTCTIGVWIDAGSRYETERNNGVAHFLEHMAFKGTSKRS 104
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEF 254
+ V+ G L A RE VY + ++ LA ++ + +
Sbjct: 105 QTDLELEVENIGAHLNAYTSREQTVYYAKCFSQDAEQAVDILADILLNSNY 155
>gi|256072213|ref|XP_002572431.1| mitochondrial processing peptidase beta-subunit (M16 family)
[Schistosoma mansoni]
Length = 438
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N ++ S N +P + V G+RYET N G+ H L A TE+ + + V+
Sbjct: 56 NGFRIASENWNTPTCTVGVWVDVGSRYETEHNNGVAHFLEHMAFKGTEKRSQQSLELEVE 115
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEF 254
G L A RE VY + +++ + L+ ++ ++F
Sbjct: 116 DKGAHLNAYTSREMTVYYAKCFVEDLPWAVELLSDILKNSKF 157
>gi|398391242|ref|XP_003849081.1| hypothetical protein MYCGRDRAFT_101464 [Zymoseptoria tritici
IPO323]
gi|339468957|gb|EGP84057.1| hypothetical protein MYCGRDRAFT_101464 [Zymoseptoria tritici
IPO323]
Length = 454
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +KV S ++ P+ +++ KAG RYE G+ L A +TE + I R +
Sbjct: 41 NGLKVASRDQAGPVTTLALVAKAGTRYEFAP--GLAEGLERYAFRTTERRSTLRIQRESE 98
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPW 257
G L RE IV ++ +R ++ + + LA V +T+++P+
Sbjct: 99 LLGAELQRYHTRENIVVGVKFLRDDLPYFVELLAEVATRTKYQPY 143
>gi|145508261|ref|XP_001440080.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407286|emb|CAK72683.1| unnamed protein product [Paramecium tetraurelia]
Length = 582
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHV-----LRSAAGLSTEEFTHFGIIR 209
++VVS SP+A I+VA KAG+R+ET ++ G+++ LR S E+ +
Sbjct: 161 LRVVSEQYNSPLASITVAVKAGSRFETLESSGVSNFISKLNLRGTTTRSREQ-----VEA 215
Query: 210 HVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
+ GGSL RE YT+ + E+ FL ++ + + P ++
Sbjct: 216 EIDYLGGSLKVKQGRELQTYTLTFLPSELERAVNFLGDILTNSLYSPAQI 265
>gi|331213021|ref|XP_003307780.1| hypothetical protein PGTG_00730 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309298183|gb|EFP74774.1| hypothetical protein PGTG_00730 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 434
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 130 RSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITH 189
RS+A Q A + + Q+ T+ + + N+ + ISV KAG+RY+ P + G+ H
Sbjct: 16 RSYAHQAAAPLTITAN-QAATAQTVLTTPADNKLT--GSISVFIKAGSRYQ-PSH-GLAH 70
Query: 190 VLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+L+++ ST++ + ++R + GG L +++ RE ++ + E ++ G+ + L V+
Sbjct: 71 LLKNSVFKSTQKRSALSLVRETELLGGILTSSLTREHLILSAEFLKGNEGYFAEVLGDVI 130
Query: 250 GKTEF 254
++F
Sbjct: 131 SCSKF 135
>gi|238568781|ref|XP_002386500.1| hypothetical protein MPER_15215 [Moniliophthora perniciosa FA553]
gi|215438660|gb|EEB87430.1| hypothetical protein MPER_15215 [Moniliophthora perniciosa FA553]
Length = 123
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQA 214
VKV +++ P + +++ KAG+R+E G+ H L+ A ST + + G IR +
Sbjct: 27 VKVAAIDSNQPTSSVTLLVKAGSRFE--PKAGVAHGLKHFAFKSTGKRSALGTIRESELY 84
Query: 215 GGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
GG L A + RE + T E +R + H L S +
Sbjct: 85 GGVLSANLSREYLALTAEFLRGDEEHFVDVLTSFI 119
>gi|358396965|gb|EHK46340.1| Hypothetical protein TRIATDRAFT_128537 [Trichoderma atroviride IMI
206040]
Length = 456
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYE-TPDNLGITHVLRSAAGLSTEEFTHFGIIRHV 211
N +KV S + P ++V KAG RY+ P G+T L A +T+ + I R
Sbjct: 43 NGLKVASKDTQGPTTTLAVVAKAGTRYQPLP---GLTFGLEQYAFKTTQRRSALRIAREA 99
Query: 212 QQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRL 266
+ GG L A+ RE +V +R ++ + + LA VV +T++ E + R+
Sbjct: 100 ELLGGQLTASHTREALVIEASFLRDDLPYFAELLAEVVSQTKYTTHEFHEEIERI 154
>gi|389609311|dbj|BAM18267.1| mitochondrial processing peptidase beta subunit [Papilio xuthus]
Length = 467
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N ++V S + SP A + + AG+RYET N G+ H L A T + + + V+
Sbjct: 44 NGIRVASEDSGSPTATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTDLELLVE 103
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
G L A RE V+ + + +I + LA ++
Sbjct: 104 NMGAHLNAYTSREQTVFYAKCLANDIPVAVEILADII 140
>gi|387914402|gb|AFK10810.1| peptidase (mitochondrial processing) beta [Callorhinchus milii]
Length = 479
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%)
Query: 137 ATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAG 196
A + L P+ + T N ++V S + P + + AG+RYE N G H L A
Sbjct: 38 AVQVLNIPETKVTTLDNGLRVSSEDSGLPTCTVGLWIDAGSRYENEKNNGTAHFLEHMAF 97
Query: 197 LSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
T++ + + ++ G L A RE VY +A K++ + LA ++
Sbjct: 98 KGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADII 150
>gi|320167416|gb|EFW44315.1| peptidase beta [Capsaspora owczarzaki ATCC 30864]
Length = 470
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%)
Query: 143 SPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEF 202
+P+ + T N ++V S N A + + G+R+ET N G+ H L T+
Sbjct: 39 TPETKITTLKNGLRVASENTGHLSATVGLWIDTGSRFETEQNNGVAHFLEHMFFKGTKRR 98
Query: 203 THFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEF 254
T G+ V+ G SL A RE VY + + + LA ++ ++F
Sbjct: 99 TQQGLEAEVESIGASLNAYTSREQTVYYAKVLNNNVNDAVDLLADILQNSKF 150
>gi|73667388|ref|YP_303404.1| insulinase-like:peptidase M16, C-terminal, partial [Ehrlichia canis
str. Jake]
gi|72394529|gb|AAZ68806.1| Insulinase-like:Peptidase M16, C-terminal [Ehrlichia canis str.
Jake]
Length = 421
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%)
Query: 169 ISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIV 228
I++ G+RYE + GI+H L A T+ T I + GG+ A DRE V
Sbjct: 27 INIWINVGSRYENTNITGISHFLEHMAFKGTKTRTALDIAQIFDDIGGNFNAHTDREHTV 86
Query: 229 YTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
Y ++ ++++I + LA ++ ++F E+
Sbjct: 87 YHVKTLKRDIKIAIEVLADIILNSQFPQEEI 117
>gi|390595705|gb|EIN05109.1| LuxS/MPP-like metallohydrolase [Punctularia strigosozonata
HHB-11173 SS5]
Length = 426
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQA 214
VKV + + P + +++ KAG+R++ G+ H L++ A ST + + G +R +
Sbjct: 29 VKVAAADHGQPTSSVTLLVKAGSRFDPKP--GVAHTLKNFAFKSTGKRSGLGTVREAELY 86
Query: 215 GGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG L+A + RE + T + +R + + L S + ++F E+++
Sbjct: 87 GGVLHAGLSREYLTVTADFLRGDESYFVDLLTSFITSSKFTRHELNE 133
>gi|390604532|gb|EIN13923.1| LuxS/MPP-like metallohydrolase [Punctularia strigosozonata
HHB-11173 SS5]
Length = 524
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%)
Query: 143 SPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEF 202
+P +Q T NK++V + S + + + AG+RYETP LG++H + A +T
Sbjct: 27 APPVQITTLPNKIRVATEATPSHFSALGLYVDAGSRYETPSTLGVSHFVDRLAFKTTATR 86
Query: 203 THFGIIRHVQQAGGSLYATVDREGIVY 229
+ + + Q GG + RE ++Y
Sbjct: 87 SQEEMSAAIDQMGGQIMCASARESMMY 113
>gi|346979164|gb|EGY22616.1| cytochrome b-c1 complex subunit 2 [Verticillium dahliae VdLs.17]
Length = 458
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 7/129 (5%)
Query: 130 RSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITH 189
R A+ ++ ++ P SG VK+ + + P A+++V KAG RY+ G+
Sbjct: 27 RGLASAASSSGIYEPSEASG-----VKLAARDSHGPTAKLAVVAKAGTRYQPLP--GLAA 79
Query: 190 VLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
L S A +T++ + I R + GG L A RE +V +R ++ + + L VV
Sbjct: 80 ALESFAFKNTQKRSALRITRESELLGGQLAAYHTREALVLEASFLRDDLPYYVELLGEVV 139
Query: 250 GKTEFRPWE 258
+T++ E
Sbjct: 140 SQTKYTTHE 148
>gi|219120475|ref|XP_002180975.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407691|gb|EEC47627.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 473
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%)
Query: 164 SPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVD 223
S A + V AG+RYET N G+ H L A TE+ T + ++ GG L A
Sbjct: 59 SETATVGVWIDAGSRYETARNNGVAHFLEHLAFKGTEQRTQPQLELEIENMGGHLNAYTS 118
Query: 224 REGIVYTIEAVRKEIGHVHKFLASVV 249
RE VY + + ++G + L+ ++
Sbjct: 119 REQTVYFAKVFKDDVGKAVEILSDIL 144
>gi|115942950|ref|XP_001176813.1| PREDICTED: mitochondrial-processing peptidase subunit beta-like
isoform 2 [Strongylocentrotus purpuratus]
Length = 476
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Query: 127 SAKRSFAAQPATKALFS-PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNL 185
+ R + Q A++ L + P+ + T N +V S + P A + + AG+RYE N
Sbjct: 25 AGSRLRSTQTASETLVNVPETRVTTLNNGFRVSSEDSGIPTATVGLWIDAGSRYENAKNN 84
Query: 186 GITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFL 245
G+ H L A T T + ++ G L A RE VY + ++ + L
Sbjct: 85 GVAHYLEHMAFKGTSNRTQMELELEIENMGAHLNAYTSREQTVYYAKCFESDVPRAVEIL 144
Query: 246 ASVV 249
A ++
Sbjct: 145 ADII 148
>gi|401625482|gb|EJS43490.1| mas2p [Saccharomyces arboricola H-6]
Length = 482
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +KV + N + + + AG+R+E + G TH+L A STE + ++
Sbjct: 26 NGLKVATSNSPGHFSALGLYIDAGSRFEGRNLKGCTHILDRLAFRSTEHIEGRAMAETLE 85
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
GG+ T RE I+Y +++G + K ++ V
Sbjct: 86 LLGGNYQCTSSRENIMYQASVFNQDVGKMLKLMSETV 122
>gi|296415508|ref|XP_002837428.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633300|emb|CAZ81619.1| unnamed protein product [Tuber melanosporum]
Length = 445
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQA 214
+ V S ++ P ++V + G+RYET G+ H L A + + R +
Sbjct: 44 ITVASRDDGGPTTTLAVVSRGGSRYETSP--GLAHGLEKFA-FKNSRRSALRLQRETELL 100
Query: 215 GGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GGSL +T+ RE IV + +R+++ + + LA V+ T++ P+E ++
Sbjct: 101 GGSLGSTLSRENIVLRAKFLREDLPYFVEALADVLIHTKYNPYEFNE 147
>gi|3659967|pdb|1BCC|A Chain A, Cytochrome Bc1 Complex From Chicken
gi|3660376|pdb|3BCC|A Chain A, Stigmatellin And Antimycin Bound Cytochrome Bc1 Complex
From Chicken
gi|5822457|pdb|2BCC|A Chain A, Stigmatellin-Bound Cytochrome Bc1 Complex From Chicken
Length = 446
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+ Q N V+V S + P + V AG+RYE+ N G + L A T+
Sbjct: 12 PETQVSQLDNGVRVASEQSSQPTCTVGVWIDAGSRYESEKNNGAGYFLEHLAFKGTKNRP 71
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + V+ G L A RE Y I+A+ K++ + LA +V
Sbjct: 72 QNALEKEVESMGAHLNAYSSREHTAYYIKALSKDVPKAVELLADIV 117
>gi|218885340|ref|YP_002434661.1| peptidase M16 domain-containing protein [Desulfovibrio vulgaris
str. 'Miyazaki F']
gi|218756294|gb|ACL07193.1| peptidase M16 domain protein [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 937
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 157 VVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGG 216
++ +E P+A + + AG+ YETP GI+HVL TE + R V++AGG
Sbjct: 42 LIQPDERFPLASLRLYVHAGSTYETPREAGISHVLEHMVFKGTENRPKGAVARDVERAGG 101
Query: 217 SLYATVDREGIVYTIE 232
L A + VY +
Sbjct: 102 YLNAATSFDYTVYLTD 117
>gi|409042793|gb|EKM52276.1| hypothetical protein PHACADRAFT_260537 [Phanerochaete carnosa
HHB-10118-sp]
Length = 423
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQA 214
VK+ + + P + ++ KAG+RY+ + GI H L + A ST + + IR +
Sbjct: 27 VKIAAADNGEPTSTVTFLVKAGSRYQ--NKPGIAHALTNFAFKSTSKRSGLATIREAELY 84
Query: 215 GGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG L +++ RE + T E +R + + L+S V + +F E+ +
Sbjct: 85 GGILSSSLSREHLALTAEFLRGDEPYFVDVLSSFVTEAKFTRHELQE 131
>gi|71999683|ref|NP_501576.2| Protein MPPB-1 [Caenorhabditis elegans]
gi|34556100|emb|CAA92566.2| Protein MPPB-1 [Caenorhabditis elegans]
Length = 458
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 127 SAKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLG 186
S +R QP K++F P+ T N +V + N A I V AG+RYE N G
Sbjct: 13 SQRRIAQVQP--KSVFVPETIVTTLPNGFRVATENTGGSTATIGVFIDAGSRYENEKNNG 70
Query: 187 ITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVY 229
H L A T T G+ V+ G L A RE Y
Sbjct: 71 TAHFLEHMAFKGTPRRTRMGLELEVENIGAHLNAYTSRESTTY 113
>gi|410725689|ref|ZP_11364059.1| putative Zn-dependent peptidase [Clostridium sp. Maddingley
MBC34-26]
gi|410601746|gb|EKQ56245.1| putative Zn-dependent peptidase [Clostridium sp. Maddingley
MBC34-26]
Length = 413
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%)
Query: 145 DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTH 204
D++ T N ++V+++ + + IA I++ K GA YE GI+H + A T+ +
Sbjct: 7 DVKRHTLENGLEVITIQKDTQIAAINIGVKVGAIYENMKEKGISHFIEHALFKGTKNRSD 66
Query: 205 FGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
+ ++ GG A D + VYTI + +E + + L ++ F E+
Sbjct: 67 EELNEELEALGGEYNAYTDYDATVYTISCLMEEFENAIELLGDMIINPAFDGAEI 121
>gi|403417758|emb|CCM04458.1| predicted protein [Fibroporia radiculosa]
Length = 524
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Query: 143 SPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVL-----RSAAGL 197
+P +Q T NK++V + + + + + G+RYETP G++H L ++
Sbjct: 28 NPTVQITTLPNKIRVATESTPGHFSSVGLYVDTGSRYETPSTSGVSHFLDRLAFKTTTSR 87
Query: 198 STEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPW 257
S EE H V + GG + + RE I+Y + +A V F P
Sbjct: 88 SEEEMAHA-----VDKLGGQILCSSSRESIMYQSSHFHQATPLAVSLIADTVLDAAFLPD 142
Query: 258 EVS 260
E++
Sbjct: 143 EIA 145
>gi|68490062|ref|XP_711152.1| hypothetical protein CaO19.6295 [Candida albicans SC5314]
gi|68490099|ref|XP_711134.1| hypothetical protein CaO19.13674 [Candida albicans SC5314]
gi|46432412|gb|EAK91895.1| hypothetical protein CaO19.13674 [Candida albicans SC5314]
gi|46432431|gb|EAK91913.1| hypothetical protein CaO19.6295 [Candida albicans SC5314]
Length = 522
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P I+ T N +++++ + + AG+RYE P G++++ + STE+FT
Sbjct: 40 PHIELTTFANGLRLITDSTPGHFNAVGAYIDAGSRYEDPKAPGLSYLRDRLSWKSTEDFT 99
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKT 252
++ ++ + GG+ ++ RE ++Y K+I + ++G+T
Sbjct: 100 GQQMLENLSKLGGNYMSSAQRESMIYQASVFNKDIDR----MVGMIGQT 144
>gi|448088329|ref|XP_004196520.1| Piso0_003742 [Millerozyma farinosa CBS 7064]
gi|448092470|ref|XP_004197551.1| Piso0_003742 [Millerozyma farinosa CBS 7064]
gi|359377942|emb|CCE84201.1| Piso0_003742 [Millerozyma farinosa CBS 7064]
gi|359378973|emb|CCE83170.1| Piso0_003742 [Millerozyma farinosa CBS 7064]
Length = 445
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 14/110 (12%)
Query: 42 ESLDESHHFSPPQALQASIDVVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQ 101
E LDE HF+ + + SI I DA++ARGKA +K L ++ +T + +
Sbjct: 328 ERLDEFVHFTLKEWNRLSIS------ITDAEVARGKAAVKTALLRELDSTSATASDIANK 381
Query: 102 AVTTGVVKSLPDLLAEVEAVSSSDVSAKRSFAAQPATKALFSPDIQ-SGT 150
+ G KSL + ++A+++ DV A A AL+ DI SGT
Sbjct: 382 VLLVGYRKSLTEAFQNIDAITTKDVKAW-------ANTALWDRDIVISGT 424
>gi|345560296|gb|EGX43421.1| hypothetical protein AOL_s00215g157 [Arthrobotrys oligospora ATCC
24927]
Length = 552
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Query: 129 KRSFAAQPATKALFSPDIQSGTSY-NKVKVVSVNETSPIARISVAFKAGARYETPDNLGI 187
+RSFA+ + A SPD + T+ N V+V + + + V AGARYE G+
Sbjct: 23 RRSFASLKPSSAE-SPDFEKVTTLPNGVRVATEAMPGHFSGVGVYLDAGARYEDDSLRGV 81
Query: 188 THVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLAS 247
+H++ A ST++ T + +++ GG++ RE I+Y ++ LA
Sbjct: 82 SHIVDRLAFKSTKQRTMESMYESIERLGGNVQCISSRESIMYQSAVFNHDVSTAMGLLAE 141
Query: 248 VV 249
+
Sbjct: 142 TI 143
>gi|354480221|ref|XP_003502306.1| PREDICTED: mitochondrial-processing peptidase subunit beta-like
[Cricetulus griseus]
Length = 614
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Query: 128 AKRSFAAQPATKALFS-PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLG 186
R + Q AT+ + + P+ + N ++V S N + + AG+RYE N G
Sbjct: 164 GNRLRSTQAATQVVLNVPETRVTCLENGLRVASENSGISTCTVGLWIDAGSRYENEKNNG 223
Query: 187 ITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLA 246
H L A T++ T + ++ G L A RE VY +A K++ + LA
Sbjct: 224 TAHFLEHMAFKGTKKRTQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILA 283
Query: 247 SVV 249
++
Sbjct: 284 DII 286
>gi|17987734|ref|NP_540368.1| processing peptidase [Brucella melitensis bv. 1 str. 16M]
gi|17983454|gb|AAL52632.1| zinc protease [Brucella melitensis bv. 1 str. 16M]
Length = 490
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%)
Query: 169 ISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIV 228
+ + KAGAR E PD GI H+L A TE T + I ++ GG + AT E
Sbjct: 87 LGIWVKAGARNEAPDRHGIAHLLEHMAFKGTENRTAWQIASDIENVGGEINATTSVETTS 146
Query: 229 YTIEAVRKEIGHVHKFLASVVGKTEF 254
Y +R ++ L+ ++ ++F
Sbjct: 147 YYARVLRNDMPLAIDILSDILTASKF 172
>gi|149046593|gb|EDL99418.1| peptidase (mitochondrial processing) beta, isoform CRA_d [Rattus
norvegicus]
Length = 222
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Query: 130 RSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITH 189
RS A P L P+ Q N ++V S N + + AG+RYE N G H
Sbjct: 43 RSTQAAPQV-VLNVPETQVTCLENGLRVASENSGISTCTVGLWIDAGSRYENEKNNGTAH 101
Query: 190 VLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
L A T++ + + ++ G L A RE VY +A K++ + LA ++
Sbjct: 102 FLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADII 161
>gi|451994613|gb|EMD87083.1| hypothetical protein COCHEDRAFT_1207011 [Cochliobolus
heterostrophus C5]
Length = 484
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 10/143 (6%)
Query: 122 SSSDVSAKRSFAAQPATKALFSP-----DIQSGTSYNKVKVVSVNETSPIARIS---VAF 173
S S +SA +S P T+ L +P +S T N + + E SP A+ S V
Sbjct: 16 SRSAISAVKSSRQSPLTRGLATPISYGAKTESTTLKNGFTIAT--EHSPWAQTSTVGVWI 73
Query: 174 KAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEA 233
AG+R ET + G H L A T++ T + ++ GG L A RE VY +A
Sbjct: 74 DAGSRAETDETNGTAHFLEHLAFKGTQKRTQQQLELEIENMGGHLNAYTSRENTVYYAKA 133
Query: 234 VRKEIGHVHKFLASVVGKTEFRP 256
++ L+ ++ ++ P
Sbjct: 134 FNNDVPAAVDILSDILQNSKLEP 156
>gi|70984832|ref|XP_747922.1| ubiquinol-cytochrome C reductase complex core protein 2, putative
[Aspergillus fumigatus Af293]
gi|66845550|gb|EAL85884.1| ubiquinol-cytochrome C reductase complex core protein 2, putative
[Aspergillus fumigatus Af293]
Length = 460
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 120 AVSSSDVSAKRSFAAQPATKALFSPDIQSGTSYNK-VKVVSVNETSPIARISVAFKAGAR 178
A+S++ S++RS A+ +P +Q S + VKV + P +++ KAG+R
Sbjct: 14 ALSAATASSRRSMASAA------TPGLQYDVSESAGVKVANREVAGPTGTLALVAKAGSR 67
Query: 179 YET-PDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKE 237
Y+ P G + L A ST + + I R V+ GG + +T RE +V + + K+
Sbjct: 68 YQPFP---GFSDALEFFAFKSTLKRSALRITREVELLGGEVSSTHSRENVVLKAKFLSKD 124
Query: 238 IGHVHKFLASVVGKTEFRPWEVSDLTPRL-KY 268
+ + + LA V +T+F E+++L L KY
Sbjct: 125 LPYFAELLAEVAFQTKFAGHELNELVLNLIKY 156
>gi|348581854|ref|XP_003476692.1| PREDICTED: cytochrome b-c1 complex subunit 1, mitochondrial-like
[Cavia porcellus]
Length = 480
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+ Q N ++V S + P + V AG+RYET N G + + A T+
Sbjct: 46 PETQVSVLDNGLRVASEHSAQPTCTVGVWIDAGSRYETEKNNGAGYFVEHLAFKGTKNRP 105
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + V+ G L A RE Y I+A+ K++ V + LA +V
Sbjct: 106 GSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKVVELLADIV 151
>gi|328862381|gb|EGG11482.1| mitochondrial processing peptidase [Melampsora larici-populina
98AG31]
Length = 531
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 27/153 (17%)
Query: 131 SFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHV 190
S ++QP T+ P N +KV + + I V AG+RYE+ G+TH+
Sbjct: 31 SSSSQPITQTSILP--------NGIKVATESTPGHFIGIGVYIDAGSRYESHKLRGVTHL 82
Query: 191 LRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVG 250
A ST+ T I + ++ GGS +A+ R+ IVY + I V S++
Sbjct: 83 TDRMAFKSTQTRTKDQIGQEIESLGGSFFASSGRDTIVYQATSYPNSINSV----LSILS 138
Query: 251 KTEFRP---------------WEVSDLTPRLKY 268
T P WEV+++ +Y
Sbjct: 139 DTSLNPLLTKEELEIEKLSTEWEVNEINKNPEY 171
>gi|11693166|ref|NP_071790.1| mitochondrial-processing peptidase subunit beta precursor [Rattus
norvegicus]
gi|294589|gb|AAA41633.1| mitochondrial processing peptidase beta-subunit [Rattus norvegicus]
Length = 489
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Query: 130 RSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITH 189
RS A P L P+ Q N ++V S N + + AG+RYE N G H
Sbjct: 43 RSTQAAPQV-VLNVPETQVTCLENGLRVASENSGISTCTVGLWIDAGSRYENEKNNGTAH 101
Query: 190 VLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
L A T++ + + ++ G L A RE VY +A K++ + LA ++
Sbjct: 102 FLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADII 161
>gi|156379647|ref|XP_001631568.1| predicted protein [Nematostella vectensis]
gi|156218610|gb|EDO39505.1| predicted protein [Nematostella vectensis]
Length = 485
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Query: 111 LPDLLAEVEAVSSSDVSAKRSFAAQPAT--KALFS-PDIQSGTSYNKVKVVSVNETSPIA 167
L ++L++ + ++ KR ++ T ++L++ PD + T N +KV + + A
Sbjct: 17 LTNVLSKTHQGKAGLLACKRYQSSHALTYEQSLYNVPDTKVTTLSNGLKVATEDSGISTA 76
Query: 168 RISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGI 227
+ + AG+R+ET N G+ H L A T+ + + V+ G L A RE
Sbjct: 77 TVGLWIDAGSRFETEANNGVAHFLEHMAFKGTKNRSQMDLELEVENMGAHLNAYTSREQT 136
Query: 228 VYTIEAVRKEIGHVHKFLASVV 249
VY + K+I LA ++
Sbjct: 137 VYYAKVFSKDIPKAVDILADII 158
>gi|149046594|gb|EDL99419.1| peptidase (mitochondrial processing) beta, isoform CRA_e [Rattus
norvegicus]
Length = 246
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Query: 130 RSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITH 189
RS A P L P+ Q N ++V S N + + AG+RYE N G H
Sbjct: 43 RSTQAAPQV-VLNVPETQVTCLENGLRVASENSGISTCTVGLWIDAGSRYENEKNNGTAH 101
Query: 190 VLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
L A T++ + + ++ G L A RE VY +A K++ + LA ++
Sbjct: 102 FLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADII 161
>gi|122065519|sp|Q03346.3|MPPB_RAT RecName: Full=Mitochondrial-processing peptidase subunit beta;
AltName: Full=Beta-MPP; AltName: Full=P-52; Flags:
Precursor
gi|51259291|gb|AAH78826.1| Peptidase (mitochondrial processing) beta [Rattus norvegicus]
gi|149046592|gb|EDL99417.1| peptidase (mitochondrial processing) beta, isoform CRA_c [Rattus
norvegicus]
Length = 489
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Query: 130 RSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITH 189
RS A P L P+ Q N ++V S N + + AG+RYE N G H
Sbjct: 43 RSTQAAPQV-VLNVPETQVTCLENGLRVASENSGISTCTVGLWIDAGSRYENEKNNGTAH 101
Query: 190 VLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
L A T++ + + ++ G L A RE VY +A K++ + LA ++
Sbjct: 102 FLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADII 161
>gi|344301700|gb|EGW32005.1| hypothetical protein SPAPADRAFT_138521 [Spathaspora passalidarum
NRRL Y-27907]
Length = 478
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/126 (19%), Positives = 62/126 (49%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P ++ T N +++++ + + + + G+R+E P G++H+ A +TE+++
Sbjct: 22 PQLELTTLTNGLRLITDSTPGHFSALGAFIQGGSRFEDPAAPGLSHLCERLAWKTTEKYS 81
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLT 263
++ ++ + GG+ A R+ I+Y K++ ++ + +A V + E ++
Sbjct: 82 GTQMLENLSKLGGNYIAVAQRDTIMYQATVFNKDVDNMLECIAQTVRHQQITDQEFAETV 141
Query: 264 PRLKYD 269
KY+
Sbjct: 142 EGAKYE 147
>gi|255086998|ref|XP_002505422.1| predicted protein [Micromonas sp. RCC299]
gi|226520692|gb|ACO66680.1| predicted protein [Micromonas sp. RCC299]
Length = 428
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 162 ETSP---IARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSL 218
ETSP A I V AG+RYET N G H L A T+ T G+ ++ G L
Sbjct: 6 ETSPHAQTATIGVWIDAGSRYETAANNGTAHFLEHMAFKGTKTRTTAGLEEEIENMGAHL 65
Query: 219 YATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRP 256
A RE Y + +K++ L+ ++ + P
Sbjct: 66 NAYTSREQTTYYAKVFKKDVAKAVDVLSDILQNSSLEP 103
>gi|150017261|ref|YP_001309515.1| peptidase M16 domain-containing protein [Clostridium beijerinckii
NCIMB 8052]
gi|149903726|gb|ABR34559.1| peptidase M16 domain protein [Clostridium beijerinckii NCIMB 8052]
Length = 413
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%)
Query: 145 DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTH 204
D++ T N ++V+++ + + IA I++ K GA YE GI+H + T T
Sbjct: 7 DVKRHTLENGLEVITIKKDTQIASINIGVKVGALYENMKEKGISHFIEHTLFKGTINRTG 66
Query: 205 FGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
+ ++ GG A D + VYTI + +E + LA ++ F E+
Sbjct: 67 EELNDELEALGGEYNAYTDYDVTVYTISCLIEEFKKATELLADMIVNPTFDKNEI 121
>gi|51948476|ref|NP_001004250.1| cytochrome b-c1 complex subunit 1, mitochondrial precursor [Rattus
norvegicus]
gi|293335681|ref|NP_001169130.1| uncharacterized protein LOC100382975 [Zea mays]
gi|81884378|sp|Q68FY0.1|QCR1_RAT RecName: Full=Cytochrome b-c1 complex subunit 1, mitochondrial;
AltName: Full=Complex III subunit 1; AltName: Full=Core
protein I; AltName: Full=Ubiquinol-cytochrome-c
reductase complex core protein 1; Flags: Precursor
gi|51259340|gb|AAH78923.1| Ubiquinol-cytochrome c reductase core protein I [Rattus norvegicus]
gi|149018490|gb|EDL77131.1| ubiquinol-cytochrome c reductase core protein 1, isoform CRA_a
[Rattus norvegicus]
gi|223975095|gb|ACN31735.1| unknown [Zea mays]
Length = 480
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+ Q N ++V S + P + V G+RYET N G + L A T+
Sbjct: 46 PETQVSVLDNGLRVASEQSSHPTCTVGVWIDVGSRYETEKNNGAGYFLEHLAFKGTKNRP 105
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + V+ G L A RE Y I+A+ K++ V + LA +V
Sbjct: 106 GNALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIV 151
>gi|241955499|ref|XP_002420470.1| mitochondrial-processing peptidase (MPP) alpha subunit,
mitochondrial precursor, putative [Candida dubliniensis
CD36]
gi|223643812|emb|CAX41549.1| mitochondrial-processing peptidase (MPP) alpha subunit,
mitochondrial precursor, putative [Candida dubliniensis
CD36]
Length = 521
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P I+ T N +++++ + + + AG+RYE P G++++ + STE+FT
Sbjct: 40 PHIELTTFANGLRLITDSTPGHFSAVGAYIDAGSRYEDPKAPGLSYLRDRLSWKSTEDFT 99
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKT 252
++ ++ + GG+ ++ RE ++Y K+I + ++G+T
Sbjct: 100 GQQMLENLSKLGGNYMSSGQRESMIYQASVFNKDIDK----MVGMIGQT 144
>gi|412992380|emb|CCO20093.1| predicted protein [Bathycoccus prasinos]
Length = 504
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N + S N + + ++G++YE P G +H+L A +T T+F I + +
Sbjct: 82 NGATIASENTPGATMAVGLYLESGSKYEQPYMSGASHMLERMAFKATTNRTNFRITKEAE 141
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLK 267
SL A RE + YT++A++ + + L + EV+ + LK
Sbjct: 142 VMSASLLAAASREQMSYTVDALKTHLPEAVELLCDSALNPKLANHEVAKMAKDLK 196
>gi|145520491|ref|XP_001446101.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413578|emb|CAK78704.1| unnamed protein product [Paramecium tetraurelia]
Length = 516
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHV-----LRSAAGLSTEEFTHFGIIR 209
++VVS SP+A I+VA KAG+R+ET ++ G+++ LR S E+ +
Sbjct: 80 LRVVSEQYNSPLASITVAVKAGSRFETLESSGVSNFISKLNLRGTTTRSREQ-----VEA 134
Query: 210 HVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
+ GG+L RE YT+ + E+ FL ++ + + P ++
Sbjct: 135 EIDYLGGALKVKQGRELQTYTLTFLPSELERAVNFLGDILTNSLYSPAQI 184
>gi|348542501|ref|XP_003458723.1| PREDICTED: mitochondrial-processing peptidase subunit beta
[Oreochromis niloticus]
Length = 483
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Query: 130 RSFAAQPATK-ALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGIT 188
R A Q A + AL P+ + N ++V S + P + + AG+RYE N G
Sbjct: 35 RLLATQAAHQVALNVPETKVTALENGLRVASEDSGLPTCTVGLWIDAGSRYENERNNGTA 94
Query: 189 HVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASV 248
H L A T + + + ++ G L A RE VY +A K++ + LA +
Sbjct: 95 HFLEHMAFKGTRKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADI 154
Query: 249 V 249
+
Sbjct: 155 I 155
>gi|351698159|gb|EHB01078.1| Cytochrome b-c1 complex subunit 1, mitochondrial [Heterocephalus
glaber]
Length = 480
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%)
Query: 143 SPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEF 202
+P+ Q N ++V S + P + V AG+RYET N G + + A T+
Sbjct: 45 APETQVSVLDNGLRVASEHSARPTCTVGVWIDAGSRYETEKNNGAGYFVEHLAFKGTKNR 104
Query: 203 THFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + V+ G L A RE Y I+A+ K++ V + LA +V
Sbjct: 105 PGNSLEKEVENMGAHLNAYSTREHTAYYIKALSKDLPKVVEVLADIV 151
>gi|406990203|gb|EKE09882.1| hypothetical protein ACD_16C00100G0044 [uncultured bacterium]
Length = 410
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%)
Query: 167 ARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREG 226
A + + + GARYE+P+ GI+H L A T T I ++ GG L A +E
Sbjct: 25 ATVGLWVEVGARYESPEVNGISHFLEHMAFKGTTTRTAKQIAEEIESVGGHLNAYTSKEN 84
Query: 227 IVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVS 260
Y + ++ + +A ++ + F P EV+
Sbjct: 85 TAYHARVLEHDVPLALEIIADIIQNSTFDPSEVN 118
>gi|322698146|gb|EFY89919.1| mitochondrial processing peptidase alpha subunit, putative
[Metarhizium acridum CQMa 102]
Length = 561
Score = 43.9 bits (102), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%)
Query: 147 QSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFG 206
Q T N ++V S A + V +AG+R+ETP G++H++ A ST T
Sbjct: 35 QITTLPNGLRVASEALPGSFAGVGVYVEAGSRFETPSLRGVSHIMDRLAFKSTSSHTADA 94
Query: 207 IIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
++ V++ GG++ RE ++Y + LA +
Sbjct: 95 MLERVERRGGNIQCASSRESMMYQAATFNNAVPETVSLLAETI 137
>gi|296474769|tpg|DAA16884.1| TPA: cytochrome b-c1 complex subunit 1, mitochondrial precursor
[Bos taurus]
Length = 480
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 123 SSDVSAKRSFAAQPATKALFS-PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYET 181
SSD+ ++A +AL S P+ Q N ++V S + P + V AG+RYET
Sbjct: 29 SSDLRGTATYA-----QALQSVPETQVSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYET 83
Query: 182 PDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHV 241
N G + + A T+ + + V+ G L A RE Y I+A+ K++
Sbjct: 84 EKNNGAGYFVEHLAFKGTKNRPGNALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKA 143
Query: 242 HKFLASVV 249
+ LA +V
Sbjct: 144 VELLADIV 151
>gi|402860193|ref|XP_003894519.1| PREDICTED: cytochrome b-c1 complex subunit 1, mitochondrial-like
[Papio anubis]
Length = 480
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%)
Query: 142 FSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEE 201
F P+ Q N ++V S + P + V G+R+ET N G + L A T+
Sbjct: 44 FVPETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKNNGAGYFLEHLAFKGTKN 103
Query: 202 FTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + V+ G L A RE Y I+A+ K++ V + L +V
Sbjct: 104 RPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKVVELLGDIV 151
>gi|289742983|gb|ADD20239.1| mitochondrial processing peptidase beta subunit [Glossina morsitans
morsitans]
Length = 454
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N ++V S + + A + + AG+R ETP N G+ H L A T + + + V+
Sbjct: 30 NCLRVASEDSGASTATVGLWIDAGSRSETPQNNGVAHFLEHMAFKGTSKRSQTDLELEVE 89
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
G L A RE V+ + + K++ + LA ++
Sbjct: 90 NMGAHLNAYTSREQTVFYAKCLSKDVSKAIEILADII 126
>gi|75773788|gb|AAI04501.1| UQCRC1 protein [Bos taurus]
Length = 478
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 123 SSDVSAKRSFAAQPATKALFS-PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYET 181
SSD+ ++A +AL S P+ Q N ++V S + P + V AG+RYET
Sbjct: 27 SSDLRGTATYA-----QALQSVPETQVSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYET 81
Query: 182 PDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHV 241
N G + + A T+ + + V+ G L A RE Y I+A+ K++
Sbjct: 82 EKNNGAGYFVEHLAFKGTKNRPGNALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKA 141
Query: 242 HKFLASVV 249
+ LA +V
Sbjct: 142 VELLADIV 149
>gi|449541580|gb|EMD32563.1| hypothetical protein CERSUDRAFT_161496 [Ceriporiopsis subvermispora
B]
Length = 528
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 53/118 (44%)
Query: 142 FSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEE 201
+P +Q T NK++V + + + + + AG RYETP + G++H L A +T+
Sbjct: 25 INPPVQITTLPNKIRVATESTPGHFSSVGLYVDAGCRYETPSSSGVSHFLDRMAFKTTKT 84
Query: 202 FTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
+ + + + GG + + RE I+Y + +A V F P E+
Sbjct: 85 RSGDEMSSAIDKLGGQILCSSSRESIMYQSSHFHQASPLALSLIADTVLNPAFTPDEL 142
>gi|325190789|emb|CCA25279.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 617
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 123 SSDVSAKRSFAAQ----PATKA---LFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKA 175
SSD+ + S + P K+ L +P + T + ++V+S A I + A
Sbjct: 150 SSDIKTQLSLLQEISNLPKLKSANQLQAPTTEITTLKSGLRVISQETYGQAATIGLFVNA 209
Query: 176 GARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVR 235
G+R E LG++H+L +T +H ++R ++ G A+ RE I+YTI+ +R
Sbjct: 210 GSRDEDETTLGVSHMLEHLGFKTTRNRSHAQLLREIETIGALTTASSGREQIIYTIDLLR 269
Query: 236 KEI 238
+
Sbjct: 270 DNL 272
>gi|90075616|dbj|BAE87488.1| unnamed protein product [Macaca fascicularis]
gi|355559662|gb|EHH16390.1| hypothetical protein EGK_11664 [Macaca mulatta]
gi|380788651|gb|AFE66201.1| cytochrome b-c1 complex subunit 1, mitochondrial precursor [Macaca
mulatta]
gi|384940352|gb|AFI33781.1| cytochrome b-c1 complex subunit 1, mitochondrial precursor [Macaca
mulatta]
Length = 480
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%)
Query: 142 FSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEE 201
F P+ Q N ++V S + P + V G+R+ET N G + L A T+
Sbjct: 44 FVPETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKNNGAGYFLEHLAFKGTKN 103
Query: 202 FTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + V+ G L A RE Y I+A+ K++ V + L +V
Sbjct: 104 RPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKVVELLGDIV 151
>gi|70995596|ref|XP_752553.1| mitochondrial processing peptidase alpha subunit [Aspergillus
fumigatus Af293]
gi|41581262|emb|CAE47911.1| mitochondrial processing peptidase alpha subunit, putative
[Aspergillus fumigatus]
gi|66850188|gb|EAL90515.1| mitochondrial processing peptidase alpha subunit, putative
[Aspergillus fumigatus Af293]
gi|159131308|gb|EDP56421.1| mitochondrial processing peptidase alpha subunit, putative
[Aspergillus fumigatus A1163]
Length = 581
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 127 SAKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLG 186
SA RSFA +K D Q T N ++V + + P A + V AG+RYE G
Sbjct: 21 SASRSFATLNESKDPAELD-QITTLPNGIRVATESLPGPFAGVGVYVDAGSRYEDESLRG 79
Query: 187 ITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVY 229
++H++ A ST+ T ++ ++ GG++ RE ++Y
Sbjct: 80 VSHIMDRLAFKSTKSRTSDEMLETLESLGGNIQCASSRESLMY 122
>gi|426249589|ref|XP_004018532.1| PREDICTED: cytochrome b-c1 complex subunit 1, mitochondrial-like
[Ovis aries]
Length = 482
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 123 SSDVSAKRSFAAQPATKALFS-PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYET 181
SSD+ ++A +AL S P+ Q N ++V S + P + V AG+RYET
Sbjct: 29 SSDLRGTATYA-----QALQSVPETQVSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYET 83
Query: 182 PDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHV 241
N G + + A T+ + + V+ G L A RE Y I+A+ K++
Sbjct: 84 EKNNGAGYFVEHLAFKGTKNRPGNALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKA 143
Query: 242 HKFLASVV 249
+ LA +V
Sbjct: 144 VELLADIV 151
>gi|169845024|ref|XP_001829232.1| mitochondrial processing peptidase [Coprinopsis cinerea
okayama7#130]
gi|116509663|gb|EAU92558.1| mitochondrial processing peptidase [Coprinopsis cinerea
okayama7#130]
Length = 518
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 52/117 (44%)
Query: 143 SPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEF 202
S ++Q T NK++V + + + + AGARYETPD G ++ L A ST+
Sbjct: 25 SSNVQITTLPNKLRVATDTTPGHFSSVGLYIDAGARYETPDTTGASYFLDRMAFKSTKNR 84
Query: 203 THFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
+ + + G + A+ RE ++Y K + +A + F P E+
Sbjct: 85 SDEDMAAAISSLGSQIMASSSRETMMYQSSHFHKGTPLALELIADTIQNPAFAPEEI 141
>gi|145483937|ref|XP_001427991.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395074|emb|CAK60593.1| unnamed protein product [Paramecium tetraurelia]
Length = 516
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHV-----LRSAAGLSTEEFTHFGIIR 209
++VVS SP+A I+VA KAG+R+ET ++ G+++ LR S E+ +
Sbjct: 80 LRVVSEQYNSPLASITVAVKAGSRFETLESSGVSNFISKLNLRGTTTKSREQ-----VEA 134
Query: 210 HVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
+ GG+L RE YT+ + E+ FL ++ + + P ++
Sbjct: 135 EIDYLGGALKVKQGRELQTYTLTFLPSELERAVSFLGDILTNSLYSPAQI 184
>gi|440893706|gb|ELR46376.1| Cytochrome b-c1 complex subunit 1, mitochondrial [Bos grunniens
mutus]
Length = 496
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 123 SSDVSAKRSFAAQPATKALFS-PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYET 181
SSD+ ++A +AL S P+ Q N ++V S + P + V AG+RYET
Sbjct: 29 SSDLRGTATYA-----QALQSVPETQVSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYET 83
Query: 182 PDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHV 241
N G + + A T+ + + V+ G L A RE Y I+A+ K++
Sbjct: 84 EKNNGAGYFVEHLAFKGTKNRPGNALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKA 143
Query: 242 HKFLASVV 249
+ LA +V
Sbjct: 144 VELLADIV 151
>gi|92110045|ref|NP_001035208.1| cytochrome b-c1 complex subunit 1, mitochondrial [Macaca mulatta]
Length = 480
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%)
Query: 142 FSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEE 201
F P+ Q N ++V S + P + V G+R+ET N G + L A T+
Sbjct: 44 FVPETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKNNGAGYFLEHLAFKGTKN 103
Query: 202 FTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + V+ G L A RE Y I+A+ K++ V + L +V
Sbjct: 104 RPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKVVELLGDIV 151
>gi|326427483|gb|EGD73053.1| hypothetical protein PTSG_04766 [Salpingoeca sp. ATCC 50818]
Length = 487
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 137 ATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAG 196
AT+A + P+I + N +KV+S + A ++ + G R+E D G ++ + A
Sbjct: 34 ATQA-YEPEIFTSVLPNGIKVISQPQGRGWASLAALTELGPRFEKDDYKGCSYFVEHLAF 92
Query: 197 LSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRP 256
S E TH ++ + GG + + ++++ ++++I + ++ V LA+ + F
Sbjct: 93 KSNESQTHSEVLEAIHAFGGDVLSQMNKDSLLHSINFIPDQLPAVVDVLANAMRTPRFSD 152
Query: 257 WEVSDLTPRLKY 268
EV++ L Y
Sbjct: 153 DEVAEQFHMLDY 164
>gi|67971040|dbj|BAE01862.1| unnamed protein product [Macaca fascicularis]
Length = 407
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%)
Query: 142 FSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEE 201
F P+ Q N ++V S + P + V G+R+ET N G + L A T+
Sbjct: 44 FVPETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKNNGAGYFLEHLAFKGTKN 103
Query: 202 FTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + V+ G L A RE Y I+A+ K++ V + L +V
Sbjct: 104 RPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKVVELLGDIV 151
>gi|269784705|ref|NP_001161452.1| mitochondrial-processing peptidase subunit beta [Nasonia
vitripennis]
Length = 477
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%)
Query: 130 RSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITH 189
RS AA + P ++ T N ++V S + + A + + AG+RYET +N G+ H
Sbjct: 29 RSTAASLQQALINQPPTKTSTLDNGMRVASEDSGAATATVGLWIDAGSRYETDENNGVAH 88
Query: 190 VLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ A T + + + ++ G L A RE V+ + + +++ + L+ ++
Sbjct: 89 FMEHMAFKGTAKRSQTDLELEIENMGAHLNAYTSREQTVFYAKCLSQDVPKAVEILSDII 148
>gi|149639271|ref|XP_001507859.1| PREDICTED: mitochondrial-processing peptidase subunit beta
[Ornithorhynchus anatinus]
Length = 495
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Query: 125 DVSAKRSFAAQPATKALFS-PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPD 183
+V KR +AQ A + + + P+ + + N ++V S + + + AG+RYE
Sbjct: 42 NVGEKRFRSAQAAAQVVLNVPETRVTSLENGLRVASEDSGLSTCTVGLWIDAGSRYENEK 101
Query: 184 NLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHK 243
N G H L A T++ + + ++ G L A RE VY +A +++ +
Sbjct: 102 NNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSRDLPRAVE 161
Query: 244 FLASVV 249
LA ++
Sbjct: 162 ILADII 167
>gi|29839507|sp|P97997.1|MPPA_BLAEM RecName: Full=Mitochondrial-processing peptidase subunit alpha;
AltName: Full=Alpha-MPP; Flags: Precursor
gi|1906032|gb|AAB50243.1| mitochondrial processing peptidase alpha subunit [Blastocladiella
emersonii]
Length = 474
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQA 214
++V + S A + V AG YET + G++H + S A ST T +++ +
Sbjct: 24 IRVATAPSNSHFAAVGVYVDAGPIYETSIDRGVSHFVSSLAFKSTHGATESQVLKTMAGL 83
Query: 215 GGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRP 256
GG+L+ T RE I+Y + ++ + LA T RP
Sbjct: 84 GGNLFCTATRESILYQGSVLHHDLPRTVQLLA----DTTLRP 121
>gi|20988752|gb|AAH30064.1| Uqcrc1 protein [Mus musculus]
Length = 262
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+ Q N ++V S + + V AG+RYET N G + L A T+
Sbjct: 46 PETQVSILDNGLRVASEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRP 105
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + V+ G L A RE Y I+A+ K++ V + LA +V
Sbjct: 106 GNALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIV 151
>gi|149046590|gb|EDL99415.1| peptidase (mitochondrial processing) beta, isoform CRA_a [Rattus
norvegicus]
Length = 178
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Query: 130 RSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITH 189
RS A P L P+ Q N ++V S N + + AG+RYE N G H
Sbjct: 43 RSTQAAPQV-VLNVPETQVTCLENGLRVASENSGISTCTVGLWIDAGSRYENEKNNGTAH 101
Query: 190 VLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
L A T++ + + ++ G L A RE VY +A K++ + LA ++
Sbjct: 102 FLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADII 161
>gi|440804195|gb|ELR25072.1| peptidase M16 inactive domain containing protein, partial
[Acanthamoeba castellanii str. Neff]
Length = 524
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%)
Query: 143 SPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEF 202
+P + T N V+V + + V AG+R ET + G THVL+ +T
Sbjct: 58 TPSTRITTLRNGVRVATEETYGQATAMGVFVDAGSRNETFETNGTTHVLQRMGFKATTNR 117
Query: 203 THFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
T I++ ++ G + ++ RE +VYT E VR ++ V + LA V
Sbjct: 118 TSAEIVQKLESLGVNAISSSSREAMVYTAEVVRGDVEEVVEVLADSV 164
>gi|395856391|ref|XP_003800612.1| PREDICTED: cytochrome b-c1 complex subunit 1, mitochondrial-like
[Otolemur garnettii]
Length = 480
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%)
Query: 142 FSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEE 201
+ P+ Q N ++V S + P + + G+RYET N G + + A T+
Sbjct: 44 YVPETQVSVLDNGLRVASEQSSHPTCTVGLWIDVGSRYETEKNNGAGYFVEHLAFKGTKN 103
Query: 202 FTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + + V+ G L A RE Y I+A+ K++ V + L +V
Sbjct: 104 WPGNALEKEVESIGAHLNAYSTREHTAYYIKALSKDLPKVVELLGDIV 151
>gi|348676284|gb|EGZ16102.1| hypothetical protein PHYSODRAFT_545625 [Phytophthora sojae]
Length = 466
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 15/139 (10%)
Query: 126 VSAKRSFAAQPATKA---------------LFSPDIQSGTSYNKVKVVSVNETSPIARIS 170
+ +K S QP T+A L +P + T + ++V S A +
Sbjct: 1 MMSKLSLVRQPLTRAQSSVAAAVSNYPSYVLNAPATEVTTLPSGLRVASEGSHGETATVG 60
Query: 171 VAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYT 230
V AG+RYET N G H L A T + T + ++ GG L A RE VY
Sbjct: 61 VWIGAGSRYETTQNNGAAHFLEHMAFKGTSKRTQQQLELEIENMGGHLNAYTSREQTVYY 120
Query: 231 IEAVRKEIGHVHKFLASVV 249
+ +K++ L+ ++
Sbjct: 121 AKVFKKDVPRAMDILSDIL 139
>gi|281343114|gb|EFB18698.1| hypothetical protein PANDA_015679 [Ailuropoda melanoleuca]
Length = 434
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+ Q N ++V S + P + V G+RYET N G + L A T+
Sbjct: 46 PETQVSVLDNGLRVASEQSSQPTCTVGVWIDVGSRYETEKNNGAGYFLEHLAFKGTKNRP 105
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + V+ G L A RE Y I+A+ K++ + LA +V
Sbjct: 106 GNALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIV 151
>gi|301781318|ref|XP_002926083.1| PREDICTED: cytochrome b-c1 complex subunit 1, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 480
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+ Q N ++V S + P + V G+RYET N G + L A T+
Sbjct: 46 PETQVSVLDNGLRVASEQSSQPTCTVGVWIDVGSRYETEKNNGAGYFLEHLAFKGTKNRP 105
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + V+ G L A RE Y I+A+ K++ + LA +V
Sbjct: 106 GNALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIV 151
>gi|301122201|ref|XP_002908827.1| mitochondrial-processing peptidase subunit beta [Phytophthora
infestans T30-4]
gi|262099589|gb|EEY57641.1| mitochondrial-processing peptidase subunit beta [Phytophthora
infestans T30-4]
Length = 466
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 15/139 (10%)
Query: 126 VSAKRSFAAQPATKA---------------LFSPDIQSGTSYNKVKVVSVNETSPIARIS 170
+ +K S QP T+A L +P + T + ++V S A +
Sbjct: 1 MMSKLSLVRQPLTRAQSSVAAAVSNYPSYVLNAPATEVTTLPSGLRVASEGSHGETATVG 60
Query: 171 VAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYT 230
V AG+RYET N G H L A T + T + ++ GG L A RE VY
Sbjct: 61 VWIGAGSRYETAQNNGAAHFLEHMAFKGTSKRTQQQLELEIENMGGHLNAYTSREQTVYY 120
Query: 231 IEAVRKEIGHVHKFLASVV 249
+ +K++ L+ ++
Sbjct: 121 AKVFKKDVPRAMDILSDIL 139
>gi|385303686|gb|EIF47744.1| putative ubiquinol cyt-c reductase core protein 2 [Dekkera
bruxellensis AWRI1499]
Length = 348
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 164 SPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVD 223
SP++ + V K TP G++H+L S+A L T+ + + R + GGS A+V
Sbjct: 28 SPVSSLKVVVKQAGSKSTPA--GLSHLLASSAFLDTKSKSGLRLKREAELLGGSYKASVT 85
Query: 224 REGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDL 262
R+ +V +++ + L+ + +T F+P E+ +L
Sbjct: 86 RDALVLEATFLKEALPFFVSALSGALTETSFKPHELDEL 124
>gi|301115456|ref|XP_002905457.1| mitochondrial-processing peptidase subunit alpha, putative
[Phytophthora infestans T30-4]
gi|262110246|gb|EEY68298.1| mitochondrial-processing peptidase subunit alpha, putative
[Phytophthora infestans T30-4]
Length = 576
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 54/112 (48%)
Query: 150 TSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIR 209
T+ + +K+ S + + +A I V GAR ET + G++ + A +TE + + R
Sbjct: 182 TALSGLKLGSDDRAASVATIGVQLNTGARDETEETAGLSQLFAKMAFRATENRSDLRLYR 241
Query: 210 HVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
++ GG + A R+ + Y++ + ++ + LA +F ++V D
Sbjct: 242 DIEAIGGVVNAQAGRDFVRYSVSVLPDQLEAAAEILAETTLAPKFALYDVDD 293
>gi|449483328|ref|XP_004156557.1| PREDICTED: probable mitochondrial-processing peptidase subunit
beta-like [Cucumis sativus]
Length = 440
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 138 TKALFSPDIQSGTSYNKVKVVS-VNETSPIARISVAFKAGARYETPDNLGITHVLRSAAG 196
T+ L +P+ + T N ++V + N T+ A + V AG+R+ET + G H L
Sbjct: 86 TRILSAPETRVTTLSNGLRVATESNLTARTATVGVWIDAGSRFETEETNGTAHFLEHMIF 145
Query: 197 LSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRP 256
TE+ + + ++ GG L A RE Y + + K++ LA ++ ++F
Sbjct: 146 KGTEKRSARQLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVPKALDILADILQNSKFDE 205
Query: 257 WEVS 260
+S
Sbjct: 206 HRIS 209
>gi|390344609|ref|XP_003726160.1| PREDICTED: mitochondrial-processing peptidase subunit alpha
[Strongylocentrotus purpuratus]
Length = 538
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEF-THFGIIRHV 211
N ++V S+N+ + V +G+R+E GI H + A TE+F + I++ +
Sbjct: 80 NGLRVASMNKFGQFCTVGVLVNSGSRHEIGYPKGIAHFMEKTAFGETEKFESRDEILQSL 139
Query: 212 QQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
++ GG R+ +VY + A R + V L+ VV K + E+ D
Sbjct: 140 EEHGGICDCQASRDTLVYGVSANRGGLEDVIHLLSEVVFKPKLSDTEIED 189
>gi|164430954|gb|ABY55749.1| ubiquinol-cytochrome c reductase core protein II [Drosophila
silvestris]
Length = 205
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 18/143 (12%)
Query: 4 KEALAFAVLKYALGAGPA-----KTGKNQRSTNSKGLSRTPGRESLDESHHFSPPQALQA 58
KEALAFA+L A+GAG A G + N G +L++S+ + A
Sbjct: 35 KEALAFAILSQAVGAGAATKRGKAAGAFGEAVNCAGGDAPISFRALNKSYSDAGLFGFVA 94
Query: 59 SID-------------VVRGAGIKDADIARGKALLKRHLADSFETLDSTVDSVVRQAVTT 105
+ D ++ I D D+ARGKALLK + + + + RQA
Sbjct: 95 AADGKDIGKAVDFLVRALKSGSISDKDVARGKALLKARTIAKYSSDGGLIKEIGRQAALN 154
Query: 106 GVVKSLPDLLAEVEAVSSSDVSA 128
V L+A ++ +S V A
Sbjct: 155 RTVLEADALVAAIDGISLQQVQA 177
>gi|346321438|gb|EGX91037.1| ubiquinol-cytochrome-c reductase complex core protein 2 [Cordyceps
militaris CM01]
Length = 457
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYE-TPDNLGITHVLRSAAGLSTEEFTHFGIIRHV 211
N +KV S + P ++++ KAG RY+ P G+T L + A +T++ + I R
Sbjct: 44 NGLKVASRDTHGPTTKLAIVAKAGTRYQPLP---GLTVGLEAFAFKNTQKRSALRINRES 100
Query: 212 QQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV-SDLTPRL 266
+ GG L A+ RE +V ++ ++ + + LA VV +T++ E D+ P L
Sbjct: 101 ELLGGQLTASHTREALVVGASFLKDDLPYFAELLAEVVTQTKYTTHEFHEDIEPIL 156
>gi|134078537|emb|CAK40458.1| unnamed protein product [Aspergillus niger]
Length = 458
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 12/151 (7%)
Query: 121 VSSSDVSAKRSFAAQPATKALFSPDIQSGTSYNK-VKVVSVNETSPIARISVAFKAGARY 179
S++ VS++R A+ +P +Q S + VKV + P + +++ KAG RY
Sbjct: 19 CSATGVSSRRGMASAA------TPGLQYDVSESAGVKVANREVAGPTSTLALVAKAGPRY 72
Query: 180 E-TPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEI 238
+ P G + L A ST + + I R V+ GG + +T RE +V + + ++
Sbjct: 73 QPVP---GFSDALEQFAFKSTLKRSALRINREVELLGGEVSSTHSRENVVLKAKFLSGDL 129
Query: 239 GHVHKFLASVVGKTEFRPWEVSDLTPR-LKY 268
+ + LA V +T+F E+S++ + LKY
Sbjct: 130 PYFAELLAEVASQTKFAAHELSEVVLKTLKY 160
>gi|326911191|ref|XP_003201945.1| PREDICTED: mitochondrial-processing peptidase subunit beta-like
[Meleagris gallopavo]
Length = 497
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Query: 126 VSAKRSFAAQPATKALFS-PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDN 184
V R AAQ AT+ + + P+ + N ++V S + + + AG+RYE N
Sbjct: 45 VGKGRFRAAQAATEVVLNVPETRVSPLENGLQVASEDSGLSTCTVGLWIDAGSRYENEKN 104
Query: 185 LGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKF 244
G H L A T++ + + ++ G L A RE VY +A K++ +
Sbjct: 105 NGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEI 164
Query: 245 LASVV 249
LA ++
Sbjct: 165 LADII 169
>gi|359412370|ref|ZP_09204835.1| processing peptidase [Clostridium sp. DL-VIII]
gi|357171254|gb|EHI99428.1| processing peptidase [Clostridium sp. DL-VIII]
Length = 413
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%)
Query: 145 DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTH 204
D+++ T N ++V+++N+ + IA I++ K GA E GI+H + T +
Sbjct: 7 DVRTHTLKNGLEVITINKDTQIAAINIGIKVGALCENIKEKGISHFIEHTLFKGTVNRSD 66
Query: 205 FGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ ++ GG A D + VYTI + +E+ + + L ++
Sbjct: 67 EELNEELEALGGEYNAYTDYDATVYTISCLAEELQNAVELLGDMI 111
>gi|317031673|ref|XP_001393980.2| ubiquinol-cytochrome C reductase complex core protein 2
[Aspergillus niger CBS 513.88]
gi|350640253|gb|EHA28606.1| hypothetical protein ASPNIDRAFT_56872 [Aspergillus niger ATCC 1015]
Length = 459
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 12/151 (7%)
Query: 121 VSSSDVSAKRSFAAQPATKALFSPDIQSGTSYNK-VKVVSVNETSPIARISVAFKAGARY 179
S++ VS++R A+ +P +Q S + VKV + P + +++ KAG RY
Sbjct: 20 CSATGVSSRRGMASAA------TPGLQYDVSESAGVKVANREVAGPTSTLALVAKAGPRY 73
Query: 180 E-TPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEI 238
+ P G + L A ST + + I R V+ GG + +T RE +V + + ++
Sbjct: 74 QPVP---GFSDALEQFAFKSTLKRSALRINREVELLGGEVSSTHSRENVVLKAKFLSGDL 130
Query: 239 GHVHKFLASVVGKTEFRPWEVSDLTPR-LKY 268
+ + LA V +T+F E+S++ + LKY
Sbjct: 131 PYFAELLAEVASQTKFAAHELSEVVLKTLKY 161
>gi|449438845|ref|XP_004137198.1| PREDICTED: probable mitochondrial-processing peptidase subunit
beta-like [Cucumis sativus]
Length = 528
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Query: 138 TKALFSPDIQSGTSYNKVKVVS-VNETSPIARISVAFKAGARYETPDNLGITHVLRSAAG 196
T+ L +P+ + T N ++V + N T+ A + V AG+R+ET + G H L
Sbjct: 86 TRILSAPETRVTTLSNGLRVATESNLTARTATVGVWIDAGSRFETEETNGTAHFLEHMIF 145
Query: 197 LSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEF 254
TE+ + + ++ GG L A RE Y + + K++ LA ++ ++F
Sbjct: 146 KGTEKRSARQLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVPKALDILADILQNSKF 203
>gi|334348429|ref|XP_001371284.2| PREDICTED: mitochondrial-processing peptidase subunit beta-like
[Monodelphis domestica]
Length = 571
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 71/171 (41%), Gaps = 5/171 (2%)
Query: 84 LADSFETLDSTVDSVVRQAVTTGVVKSLPD----LLAEVEAVSSSDVSAKRSFAAQPATK 139
L+ + + T + A + G ++ +P LL E + R + Q A +
Sbjct: 73 LSQDGDVVSCTFLTAAEAAASLGFIQQVPAPEGFLLHEPLFPKPINFGVNRLRSTQTAAQ 132
Query: 140 ALFS-PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLS 198
+ + P+ + T N ++V S + + + AG+RYE N G H L A
Sbjct: 133 VVLNVPETRVTTLENGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKG 192
Query: 199 TEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
T++ + + ++ G L A RE VY +A K++ + LA ++
Sbjct: 193 TKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADII 243
>gi|440804693|gb|ELR25570.1| peptidase M16 inactive domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 570
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P Q NK +V S ++ A + V AG+ +ET +N G+ H L A T+ T
Sbjct: 55 PPTQVTALPNKFRVASEHKHGETATVGVWIDAGSVWETAENNGVAHFLEHLAFKGTKNRT 114
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFR 255
I ++ GG L A RE VY +K++ + ++ ++ + +
Sbjct: 115 KEQIEVEIENMGGQLNAYTSREQTVYHAHVFKKDVPKAVEIISDIIQNSNLK 166
>gi|302923613|ref|XP_003053713.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734654|gb|EEU48000.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 454
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 129 KRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYE-TPDNLGI 187
+R+FAA +T + + D+ +KV S + P +++V KAG RY+ P G+
Sbjct: 23 RRTFAAAASTGSYETSDV------TGLKVASRDAHGPTTKLAVVAKAGTRYQPLP---GL 73
Query: 188 THVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLAS 247
T L A +T+ + I R + GG L ++ RE +V +R+++ + + LA
Sbjct: 74 TVGLAEFAFKNTQRRSALRITRESELLGGQLASSHTREAVVVEASFLREDLPYFTELLAE 133
Query: 248 VVGKTEFRPWE 258
V+ T++ E
Sbjct: 134 VISLTKYTTHE 144
>gi|73985642|ref|XP_851209.1| PREDICTED: cytochrome b-c1 complex subunit 1, mitochondrial isoform
2 [Canis lupus familiaris]
Length = 480
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+ Q N ++V S + P + V G+RYET N G + L A T+
Sbjct: 46 PETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRYETEKNNGAGYFLEHLAFKGTKNRP 105
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + V+ G L A RE Y I+A+ K++ + LA +V
Sbjct: 106 GNALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIV 151
>gi|156378065|ref|XP_001630965.1| predicted protein [Nematostella vectensis]
gi|156217996|gb|EDO38902.1| predicted protein [Nematostella vectensis]
Length = 487
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEF-THFGIIRHV 211
N +KV S + + V G+RYE G+THV+ A ST +F +H I++ +
Sbjct: 46 NGIKVASEESFGQFSTVGVVIDGGSRYEVDHPNGVTHVIEKMAFQSTAKFPSHDDIMQEL 105
Query: 212 QQAGGSLYATVDREGIVY 229
+ GG T R+ IVY
Sbjct: 106 EPVGGMADCTSFRDAIVY 123
>gi|308478076|ref|XP_003101250.1| CRE-MPPB-1 protein [Caenorhabditis remanei]
gi|308263955|gb|EFP07908.1| CRE-MPPB-1 protein [Caenorhabditis remanei]
Length = 459
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 50/121 (41%)
Query: 134 AQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRS 193
AQ K++F P+ T + +V + N A I V AG+RYE N G H L
Sbjct: 18 AQAQAKSVFVPETIVTTLPSGFRVATENTGGSTATIGVFIDAGSRYENAKNNGTAHFLEH 77
Query: 194 AAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTE 253
+ T T G+ V+ G L A RE Y + +++ L+ ++ +
Sbjct: 78 MSFKGTPRRTRMGLELEVENIGAHLNAYTSRESTTYYAKCFTEKLDQSVDILSDILLNSN 137
Query: 254 F 254
+
Sbjct: 138 Y 138
>gi|443899105|dbj|GAC76436.1| ubiquinol cytochrome c reductase, subunit QCR2 [Pseudozyma
antarctica T-34]
Length = 444
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQA 214
VK + ++ + + ++VA KAG+RYE+ G+ HVL++ S ++ + ++R +
Sbjct: 32 VKTAAADDGALTSTVTVAIKAGSRYESAP--GVAHVLKNYLFKSNQKRSALRLVREAEFY 89
Query: 215 GGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
GG L + +E ++ T E +R + + L V+ K++F E ++
Sbjct: 90 GGVLSTALTKEHLLLTAEFLRGDEEFFVEVLGDVLSKSKFAAHEFNE 136
>gi|428185496|gb|EKX54348.1| hypothetical protein GUITHDRAFT_83986 [Guillardia theta CCMP2712]
Length = 505
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%)
Query: 169 ISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIV 228
+ V K+G+RYET D G H L ++ T + V+Q G L A RE V
Sbjct: 90 VGVFIKSGSRYETDDGNGSAHFLEHMFFKGSKNSTQGQFEKKVEQMGCRLNAYTSREQTV 149
Query: 229 YTIEAVRKEIGHVHKFLASVVGKTEFRP 256
Y ++K++G L+ ++ + F P
Sbjct: 150 YYANVLKKDVGESLNILSEMLLNSTFDP 177
>gi|387915192|gb|AFK11205.1| ubiquinol-cytochrome c reductase core protein I [Callorhinchus
milii]
gi|392882518|gb|AFM90091.1| ubiquinol-cytochrome c reductase core protein I [Callorhinchus
milii]
Length = 475
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Query: 116 AEVEAVSSSDVSAKRSFAA-QPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFK 174
A + A SS AKR +A A L P+ + T N ++V S P + V
Sbjct: 12 ALLRAGRSSLFQAKRCQSAVSYAQTTLNFPETRITTLENGLRVASEETDHPTCTVGVWID 71
Query: 175 AGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAV 234
AG+RYE N G+++ L T+ + + + V+ G L A RE + ++++
Sbjct: 72 AGSRYENQKNNGVSNFLEHMIFKGTKTRSQSALEQEVESLGAHLNAYTSRENTAFYMKSL 131
Query: 235 RKEIGHVHKFLASVV 249
K++ V + L V+
Sbjct: 132 SKDLPKVVEILGDVI 146
>gi|189194874|ref|XP_001933775.1| cytochrome b-c1 complex subunit 2, mitochondrial precursor
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979654|gb|EDU46280.1| cytochrome b-c1 complex subunit 2, mitochondrial precursor
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 458
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 7/130 (5%)
Query: 127 SAKRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLG 186
S +R AA PA+ + QSG + VK S + T P +++ KAG RY+ G
Sbjct: 23 SQRRGLAA-PASGSF---QYQSGEA-KGVKYASRDFTGPTTTLALVAKAGTRYQPLP--G 75
Query: 187 ITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLA 246
+T L + A TE + I+R + G SL A RE +V + +R ++ + + L
Sbjct: 76 LTEGLANFAFRGTERRSTLRIVRESELLGASLNAHHSRENLVLEAKFLRDDLPYFVELLG 135
Query: 247 SVVGKTEFRP 256
V T+++P
Sbjct: 136 EVASSTKYQP 145
>gi|320164675|gb|EFW41574.1| hypothetical protein CAOG_06706 [Capsaspora owczarzaki ATCC 30864]
Length = 605
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Query: 137 ATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAG 196
A+ L SP Q N ++VVS+ I+ + G RYET + LG +H L A
Sbjct: 126 ASSGLQSPA-QCTVLPNGLRVVSIEAAGHISAVGAFVHTGCRYETEEYLGASHFLDRLAC 184
Query: 197 LSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRP 256
ST+ + + R + G + + RE +VY+ + E+ + + +V +
Sbjct: 185 RSTKRRSAEDVERETEALGTNPHCITSRENVVYSAISFSSELPQLIDLVGDLVCNPQLTQ 244
Query: 257 WEV 259
EV
Sbjct: 245 DEV 247
>gi|402086178|gb|EJT81076.1| mitochondrial-processing peptidase subunit alpha [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 583
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 130 RSFAA-QPATKALFSPDIQSGTSY-NKVKVVSVNETSPIARISVAFKAGARYETPDNLGI 187
R+FAA P +AL ++ + T+ N ++V S + + + AG+RYET G
Sbjct: 37 RAFAAVAPPPQALEPTELDNVTTLPNGIRVASEALPGAFSGVGIYIDAGSRYETDYLRGA 96
Query: 188 THVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVY 229
+H++ A ST + T ++ V+Q GG++ RE ++Y
Sbjct: 97 SHIMDRLAFKSTSKHTADEMLEQVEQLGGNIQCASSRESMMY 138
>gi|410951051|ref|XP_003982215.1| PREDICTED: cytochrome b-c1 complex subunit 1, mitochondrial-like
[Felis catus]
Length = 480
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+ Q N ++V S + P + V G+RYET N G + L A T+
Sbjct: 46 PETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRYETEKNNGAGYFLEHLAFKGTKNRP 105
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + V+ G L A RE Y I+A+ K++ + LA +V
Sbjct: 106 GNALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIV 151
>gi|355727831|gb|AES09324.1| ubiquinol-cytochrome c reductase core protein I [Mustela putorius
furo]
Length = 427
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+ Q N ++V S + P + V G+RYET N G + L A T+
Sbjct: 46 PETQVSVLDNGLRVASEQSSHPTCTVGVWIDVGSRYETEKNNGAGYFLEHLAFKGTKNRP 105
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + V+ G L A RE Y I+A+ K++ + LA +V
Sbjct: 106 GNALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIV 151
>gi|12850298|dbj|BAB28666.1| unnamed protein product [Mus musculus]
Length = 480
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+ Q N ++V S + + V AG+RYET N G + L A T+
Sbjct: 46 PETQVSILDNGLRVASEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRP 105
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + V+ G L A RE Y I+A+ K++ V + LA +V
Sbjct: 106 GNALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIV 151
>gi|345324747|ref|XP_003430852.1| PREDICTED: cytochrome b-c1 complex subunit 1, mitochondrial isoform
2 [Ornithorhynchus anatinus]
Length = 429
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+ T N +V S N P + V G+RYE N G + + A T+
Sbjct: 46 PETHVSTLANGFRVASENSNQPTCTVGVWIDVGSRYENEKNNGAGYFVEHLAFKGTKNRP 105
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + V+ G L A +RE Y I+A+ K++ + LA +V
Sbjct: 106 GNALEKEVESMGAHLNAYSNREHTAYYIKALSKDLPKAVEILADIV 151
>gi|400597938|gb|EJP65662.1| cytochrome b-c1 complex subunit 2 [Beauveria bassiana ARSEF 2860]
Length = 457
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 150 TSYNKVKVVSVNETSPIARISVAFKAGARYE-TPDNLGITHVLRSAAGLSTEEFTHFGII 208
T N +KV S P ++++ KAG RY+ P G+T L A +T++ + I
Sbjct: 41 TDANGLKVASRETHGPTTKLAIVAKAGTRYQPLP---GLTVGLEEFAFKNTQKRSGLRIY 97
Query: 209 RHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTPRLKY 268
R + GG L A+ RE +V ++ ++ + + LA VV +T++ E + R+ +
Sbjct: 98 RESELLGGQLTASHTREALVVGASFLKDDLPYFAELLAEVVTQTKYTTHEFHEDVERVLH 157
Query: 269 DR 270
R
Sbjct: 158 LR 159
>gi|344276271|ref|XP_003409932.1| PREDICTED: cytochrome b-c1 complex subunit 1, mitochondrial
[Loxodonta africana]
Length = 488
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+ Q N ++V S P + V AG+RYET N G + + A T+
Sbjct: 54 PETQVSLLDNGLRVASEQSPQPTCTVGVWIDAGSRYETEKNNGAGYFVEHLAFKGTKNRP 113
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + V+ G L A RE Y I+A+ K++ + LA +V
Sbjct: 114 GSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIV 159
>gi|74212014|dbj|BAE40175.1| unnamed protein product [Mus musculus]
Length = 480
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+ Q N ++V S + + V AG+RYET N G + L A T+
Sbjct: 46 PETQVSILDNGLRVASEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRP 105
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + V+ G L A RE Y I+A+ K++ V + LA +V
Sbjct: 106 GNALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIV 151
>gi|46593021|ref|NP_079683.2| cytochrome b-c1 complex subunit 1, mitochondrial precursor [Mus
musculus]
gi|308818155|ref|NP_001184203.1| uncharacterized protein LOC100505438 [Xenopus laevis]
gi|341941780|sp|Q9CZ13.2|QCR1_MOUSE RecName: Full=Cytochrome b-c1 complex subunit 1, mitochondrial;
AltName: Full=Complex III subunit 1; AltName: Full=Core
protein I; AltName: Full=Ubiquinol-cytochrome-c
reductase complex core protein 1; Flags: Precursor
gi|12846081|dbj|BAB27022.1| unnamed protein product [Mus musculus]
gi|68086962|gb|AAH98177.1| Unknown (protein for MGC:97899) [Xenopus laevis]
gi|74137392|dbj|BAE35744.1| unnamed protein product [Mus musculus]
gi|74198897|dbj|BAE30670.1| unnamed protein product [Mus musculus]
gi|148689377|gb|EDL21324.1| ubiquinol-cytochrome c reductase core protein 1 [Mus musculus]
Length = 480
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+ Q N ++V S + + V AG+RYET N G + L A T+
Sbjct: 46 PETQVSILDNGLRVASEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRP 105
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + V+ G L A RE Y I+A+ K++ V + LA +V
Sbjct: 106 GNALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIV 151
>gi|341878304|gb|EGT34239.1| CBN-MPPB-1 protein [Caenorhabditis brenneri]
Length = 460
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 40/96 (41%)
Query: 134 AQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRS 193
AQ K++F P+ T + ++ + N A I V AG+RYE N G H L
Sbjct: 18 AQVQQKSVFVPETIVTTLPSGFRIATENTGGSTATIGVFIDAGSRYENEKNNGTAHFLEH 77
Query: 194 AAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVY 229
A T T G+ V+ G L A RE Y
Sbjct: 78 MAFKGTPRRTRMGLELEVENIGAHLNAYTSRESTTY 113
>gi|74204326|dbj|BAE39918.1| unnamed protein product [Mus musculus]
Length = 480
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+ Q N ++V S + + V AG+RYET N G + L A T+
Sbjct: 46 PETQVSILDNGLRVASEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRP 105
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + V+ G L A RE Y I+A+ K++ V + LA +V
Sbjct: 106 GNALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIV 151
>gi|358378222|gb|EHK15904.1| hypothetical protein TRIVIDRAFT_87615 [Trichoderma virens Gv29-8]
Length = 455
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYE-TPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQ 213
+K+ S + P ++V KAG RY+ P G+T+ L A +T+ + I R +
Sbjct: 44 LKIASKDAHGPTTTLAVVAKAGTRYQPLP---GLTYGLEQFAFKTTQRRSALRIARESEL 100
Query: 214 AGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWE 258
GG L A+ RE +V +R ++ + + LA VV +T++ E
Sbjct: 101 LGGQLTASHTREALVIEASFLRDDLPYFAELLAEVVSQTKYTTHE 145
>gi|71005918|ref|XP_757625.1| hypothetical protein UM01478.1 [Ustilago maydis 521]
gi|46097012|gb|EAK82245.1| hypothetical protein UM01478.1 [Ustilago maydis 521]
Length = 445
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 150 TSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIR 209
T+ + + + ++ + + ++VA KAG+RYE+ G+ HVL++ S ++ + ++R
Sbjct: 28 TNASGITTAAADDGALTSTVTVAIKAGSRYESAP--GVAHVLKNYLFKSNQKRSALRLVR 85
Query: 210 HVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
+ GG L + +E ++ T E +R + + L V+ K++F E ++
Sbjct: 86 EAEFYGGVLSTALTKEHLLLTAEFLRGDEDFFVEVLGDVLSKSKFAAHEFNE 137
>gi|156062962|ref|XP_001597403.1| hypothetical protein SS1G_01597 [Sclerotinia sclerotiorum 1980]
gi|154696933|gb|EDN96671.1| hypothetical protein SS1G_01597 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 461
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 9/142 (6%)
Query: 124 SDVSAKRSFAAQPATKALFSPDIQSGTSYNK-------VKVVSVNETSPIARISVAFKAG 176
+ ++ +R AQPA + + TS++ VKV S + +++V KAG
Sbjct: 11 AQLAVRRQCCAQPANRRGLAAVSSGSTSFSYESSDVAGVKVASRDVAGATTKLAVVAKAG 70
Query: 177 ARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRK 236
RY+T G+T L A +T + + I R + G L A RE +V + +R+
Sbjct: 71 TRYQTAP--GLTSGLERFAFKNTFKRSALRICRESELLGAQLNAYHTREALVVEAKFLRE 128
Query: 237 EIGHVHKFLASVVGKTEFRPWE 258
++ + + L V+ T++ P E
Sbjct: 129 DLPYFTELLGEVISATKYTPHE 150
>gi|327273548|ref|XP_003221542.1| PREDICTED: mitochondrial-processing peptidase subunit beta-like
[Anolis carolinensis]
Length = 486
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 122 SSSDVSAKRSF--------AAQPATKALFS-PDIQSGTSYNKVKVVSVNETSPIARISVA 172
S S VS +RS A + A + + + P+ ++ N ++V S N + +
Sbjct: 22 SRSPVSGQRSLHLGGSRFRATKVAPEIVLNVPETKTSLLENGLRVASENSGLSTCTVGLW 81
Query: 173 FKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIE 232
AG+RYE N G H L A T++ + + ++ G L A RE VY +
Sbjct: 82 IDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYFAK 141
Query: 233 AVRKEIGHVHKFLASVV 249
A K++ + LA ++
Sbjct: 142 AFSKDLPRAVEILADII 158
>gi|345324745|ref|XP_001506033.2| PREDICTED: cytochrome b-c1 complex subunit 1, mitochondrial isoform
1 [Ornithorhynchus anatinus]
Length = 480
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%)
Query: 144 PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFT 203
P+ T N +V S N P + V G+RYE N G + + A T+
Sbjct: 46 PETHVSTLANGFRVASENSNQPTCTVGVWIDVGSRYENEKNNGAGYFVEHLAFKGTKNRP 105
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
+ + V+ G L A +RE Y I+A+ K++ + LA +V
Sbjct: 106 GNALEKEVESMGAHLNAYSNREHTAYYIKALSKDLPKAVEILADIV 151
>gi|294715508|gb|ADF30845.1| peptidase M16 inactive domain-containing protein [Euplotes
aediculatus]
Length = 524
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N ++V + +SP+A + V KAG+R ET + G+ +L T T G++ ++
Sbjct: 85 NGIRVCTEKSSSPLAAVGVFVKAGSRNETLETSGVAFMLERLLLKGTGSRTANGLVSEIE 144
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
GG A RE +T++ + ++G + LA ++
Sbjct: 145 NMGGVYEAKTKREITSHTLKVFKDDVGKAVEILADMI 181
>gi|313747444|ref|NP_001186401.1| mitochondrial-processing peptidase subunit beta [Gallus gallus]
Length = 486
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Query: 133 AAQPATKALFS-PDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVL 191
A Q AT+ + + P+ + N ++V S + + + AG+RYE N G H L
Sbjct: 41 AVQAATEVVLNVPETRVSPLENGLQVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFL 100
Query: 192 RSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
A T++ + + ++ G L A RE VY +A K++ + LA ++
Sbjct: 101 EHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADII 158
>gi|340517677|gb|EGR47920.1| predicted protein [Trichoderma reesei QM6a]
Length = 456
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 12/146 (8%)
Query: 124 SDVSAKRSFAAQPA--TKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYE- 180
S +++R FAA + T + + DI + ++V S + P ++V KAG RY+
Sbjct: 18 SGAASRRGFAAAASAPTGSYETADI------SGLRVASKDTQGPTTTLAVVAKAGTRYQP 71
Query: 181 TPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGH 240
P G+T L A +T+ + I R + GG L A+ RE +V +R ++ +
Sbjct: 72 LP---GLTFGLEQYAFKTTQRRSALRIHRESELLGGQLTASHTREALVIEASFLRDDLPY 128
Query: 241 VHKFLASVVGKTEFRPWEVSDLTPRL 266
+ LA VV +T++ E + R+
Sbjct: 129 FAELLAEVVSQTKYTTHEFHEEIERI 154
>gi|46107522|ref|XP_380820.1| hypothetical protein FG00644.1 [Gibberella zeae PH-1]
Length = 454
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Query: 129 KRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYE-TPDNLGI 187
+R++AA +T + + D SG +K+ S + P +++V KAG RY+ P G+
Sbjct: 23 RRTYAAAASTGSYETSD-ASG-----LKIASRDAHGPTTKLAVVAKAGTRYQPLP---GL 73
Query: 188 THVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLAS 247
T L A +T+ + I R + GG L ++ RE +V +R+++ + + LA
Sbjct: 74 TAGLAEFAFKNTQRRSALRITRESELLGGQLASSHSREAVVVEANFLREDLPYFTELLAE 133
Query: 248 VVGKTEFRPWEVSDLTPRL 266
V+ T++ E + R+
Sbjct: 134 VISMTKYTTHEFHEDVERV 152
>gi|322710711|gb|EFZ02285.1| ubiquinol-cytochrome-c reductase complex core protein 2
[Metarhizium anisopliae ARSEF 23]
Length = 467
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYE-TPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQ 213
+KV S + P ++++ KAG RY+ P G+T L A +T+ + I R +
Sbjct: 46 LKVASRDAHGPTTKLAIVAKAGTRYQPLP---GLTVGLEEFAFKNTQRRSALRITRESEL 102
Query: 214 AGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWE 258
GG L A+ RE +V +R+++ + + LA VV T++ E
Sbjct: 103 LGGQLNASHTREALVLEASFLREDLPYFAELLAEVVSMTKYTTHE 147
>gi|47123260|gb|AAH70011.1| Ubiquinol-cytochrome c reductase core protein I [Danio rerio]
Length = 474
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%)
Query: 137 ATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAG 196
A L +P+ + T N +++ S P + + G+RYET N G L A
Sbjct: 33 AQSLLGAPETRLTTLDNGLRIASEETNQPTCTVGLWIGCGSRYETEKNNGAGFFLEHMAF 92
Query: 197 LSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVV 249
T++ + + V+ GG L A RE Y ++ + K++ + LA VV
Sbjct: 93 KGTKKHPQSALEQAVESMGGHLNAYTSREHTAYYMKTLSKDLPKAVELLAEVV 145
>gi|342883382|gb|EGU83895.1| hypothetical protein FOXB_05609 [Fusarium oxysporum Fo5176]
Length = 454
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 129 KRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGIT 188
+R++AA +T + + D+ +KV S + P +++V KAG RY+ L +
Sbjct: 23 RRTYAAAASTGSYETSDV------TGLKVASRDAHGPTTKLAVVAKAGTRYQPLPGLSVG 76
Query: 189 HVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASV 248
L A +T+ + I R + GG L ++ RE +V +R+++ + + LA V
Sbjct: 77 --LAEFAFKNTQRRSGLRITRESELLGGQLASSHSREAVVVEASFLREDLPYFTELLAEV 134
Query: 249 VGKTEFRPWE 258
+ T++ E
Sbjct: 135 ISLTKYTTHE 144
>gi|330845720|ref|XP_003294721.1| hypothetical protein DICPUDRAFT_43851 [Dictyostelium purpureum]
gi|325074763|gb|EGC28753.1| hypothetical protein DICPUDRAFT_43851 [Dictyostelium purpureum]
Length = 537
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N ++VVS + I + AG +YE+P + G+ ++L T+ T IIR ++
Sbjct: 107 NGIRVVSKQTHEGVCAIGLYVNAGTKYESPQDRGVFNLLEKMTFKKTKNHTTSDIIRELE 166
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHV 241
+ + A+ +E I +IE +RK++ V
Sbjct: 167 EISLNAMASSSKEMINVSIEVLRKDLEFV 195
>gi|347526628|ref|YP_004833375.1| peptidase M16 family protein [Sphingobium sp. SYK-6]
gi|345135309|dbj|BAK64918.1| peptidase M16 family protein [Sphingobium sp. SYK-6]
Length = 953
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 137 ATKALFSPDIQSGTSYNKVKV-VSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAA 195
++ AL PD+++ T N +KV ++ T P RI+V+F AG + D LG++ ++ S
Sbjct: 505 SSPALDFPDVETATLANGIKVHLARRATVPAVRIAVSFDAGIASDRKDRLGLSALMLSLL 564
Query: 196 GLSTEEFTHFGIIRHVQQAGGSLYA--TVDREGIVYTIEAVRKEIGHVHKFLASVVGKTE 253
T + I ++ G S+ ++DR + ++ A++ + L VV
Sbjct: 565 DEGTTTRSTIQIAEEQERLGASISTGQSMDRTSV--SLFALKANLAPSLDLLDDVVRNPA 622
Query: 254 FRPWEVSDL 262
F P EV L
Sbjct: 623 FAPGEVERL 631
>gi|121717639|ref|XP_001276110.1| ubiquinol-cytochrome C reductase complex core protein 2, putative
[Aspergillus clavatus NRRL 1]
gi|119404308|gb|EAW14684.1| ubiquinol-cytochrome C reductase complex core protein 2, putative
[Aspergillus clavatus NRRL 1]
Length = 460
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Query: 155 VKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQA 214
VKV + P + +++ KAG+RY+ + L+ A ST + + I R V+
Sbjct: 44 VKVANREVAGPTSTLALVAKAGSRYQPLP--AFSDALKFYAFQSTLKRSALRITREVELL 101
Query: 215 GGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLT-PRLKY 268
GG + +T RE +V + + K++ + + LA V +T++ E+ +L P L+Y
Sbjct: 102 GGEVSSTHSRENVVLQAKFLSKDLPYFAELLAEVASQTKYTGHELKELILPLLRY 156
>gi|159126153|gb|EDP51269.1| ubiquinol-cytochrome C reductase complex core protein 2, putative
[Aspergillus fumigatus A1163]
Length = 460
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
Query: 143 SPDIQSGTSYNK-VKVVSVNETSPIARISVAFKAGARYE-TPDNLGITHVLRSAAGLSTE 200
+P +Q S + VKV + P +++ KAG+RY+ P G + L A ST
Sbjct: 31 TPGLQYDVSESAGVKVANREVAGPTGTLALVAKAGSRYQPFP---GFSDALEFFAFKSTL 87
Query: 201 EFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVS 260
+ + I R V+ GG + +T RE +V + + K++ + + LA V +T+F E++
Sbjct: 88 KRSALRITREVELLGGEVSSTHSRENVVLKAKFLSKDLPYFAELLAEVAFQTKFAGHELN 147
Query: 261 DLTPRL-KY 268
+L L KY
Sbjct: 148 ELVLNLIKY 156
>gi|408395936|gb|EKJ75107.1| hypothetical protein FPSE_04727 [Fusarium pseudograminearum CS3096]
Length = 454
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Query: 129 KRSFAAQPATKALFSPDIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYE-TPDNLGI 187
+R++AA +T + + D SG +K+ S + P +++V KAG RY+ P G+
Sbjct: 23 RRTYAAAASTGSYETSD-ASG-----LKIASRDAHGPTTKLAVVAKAGTRYQPLP---GL 73
Query: 188 THVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLAS 247
T L A +T+ + I R + GG L ++ RE +V +R+++ + + LA
Sbjct: 74 TAGLAEFAFKNTQRRSALRITRESELLGGQLASSHSRETVVVEANFLREDLPYFTELLAE 133
Query: 248 VVGKTEFRPWEVSDLTPRL 266
V+ T++ E + R+
Sbjct: 134 VISMTKYTTHEFHEDVERV 152
>gi|328869625|gb|EGG18002.1| mitochondrial processing peptidase alpha subunit [Dictyostelium
fasciculatum]
Length = 935
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 52/109 (47%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N +KV+S+ I + K G+ YET DN GI H+L STE T I + +
Sbjct: 122 NGIKVISLQRPESACAIGLYIKGGSNYETEDNRGIFHLLEKMVFKSTENETSSEIAKKYE 181
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSD 261
+ ++ + + ++E +RK++ ++ K + + F+ ++ +
Sbjct: 182 NISLNAMSSSSKGVMQISLEVLRKDVEYILKSFSDQITCPLFKEEDIEE 230
>gi|261194547|ref|XP_002623678.1| processing/enhancing protein [Ajellomyces dermatitidis SLH14081]
gi|239588216|gb|EEQ70859.1| processing/enhancing protein [Ajellomyces dermatitidis SLH14081]
Length = 464
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 9/136 (6%)
Query: 145 DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYET-PDNLGITHVLRSAAGLSTEEFT 203
D +SG + VK + P +S+ KAG+RY+ P G + +L A ST + +
Sbjct: 37 DFESGEAAG-VKFANREVAGPTTTLSLVAKAGSRYQPFP---GYSDLLEKFAFKSTTKRS 92
Query: 204 HFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLT 263
I R + GG L A+ RE IV + + + ++ + + LA V+ KT++ E+ +L
Sbjct: 93 ALRITRESELLGGELSASHSRENIVLSAKFLSVDLPYYLEVLADVITKTKYSQHELDELV 152
Query: 264 PRL----KYDRLTRPS 275
L + D ++ P+
Sbjct: 153 LNLVKHSQNDLVSNPA 168
>gi|239613504|gb|EEQ90491.1| processing/enhancing protein [Ajellomyces dermatitidis ER-3]
gi|327357370|gb|EGE86227.1| processing/enhancing protein [Ajellomyces dermatitidis ATCC 18188]
Length = 464
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 7/135 (5%)
Query: 145 DIQSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTH 204
D +SG + VK + P +S+ KAG+RY+ G + +L A ST + +
Sbjct: 37 DFESGEAAG-VKFANREVAGPTTTLSLVAKAGSRYQPFP--GYSDLLEKFAFKSTTKRSA 93
Query: 205 FGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVSDLTP 264
I R + GG L A+ RE IV + + + ++ + + LA V+ KT++ E+ +L
Sbjct: 94 LRITRESELLGGELSASHSRENIVLSAKFLSVDLPYYLEVLADVITKTKYSQHELDELVL 153
Query: 265 RL----KYDRLTRPS 275
L + D ++ P+
Sbjct: 154 NLVKHSQNDLVSNPA 168
>gi|212274383|ref|NP_001130460.1| uncharacterized protein LOC100191558 [Zea mays]
gi|194689184|gb|ACF78676.1| unknown [Zea mays]
Length = 459
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 12/151 (7%)
Query: 121 VSSSDVSAKRSFAAQPATKALFSPDIQSGTSYNK-VKVVSVNETSPIARISVAFKAGARY 179
S++ S++R A+ +P +Q S + VKV + P + +++ KAG RY
Sbjct: 20 CSAAGASSRRGMASAA------TPGLQYDVSESAGVKVANREVAGPTSTLALVAKAGPRY 73
Query: 180 E-TPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEI 238
+ P G + L A ST + + I R V+ GG + +T RE +V + + ++
Sbjct: 74 QPVP---GFSDALEQFAFKSTLKRSALRINREVELLGGEVSSTHSRENVVLKAKFLSGDL 130
Query: 239 GHVHKFLASVVGKTEFRPWEVSDLTPR-LKY 268
+ + LA V +T+F E+S++ + LKY
Sbjct: 131 PYFAELLAEVASQTKFAAHELSEVVLKTLKY 161
>gi|358371560|dbj|GAA88167.1| ubiquinol-cytochrome C reductase complex core protein 2
[Aspergillus kawachii IFO 4308]
Length = 459
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 12/151 (7%)
Query: 121 VSSSDVSAKRSFAAQPATKALFSPDIQSGTSYNK-VKVVSVNETSPIARISVAFKAGARY 179
S++ S++R A+ +P +Q S + VKV + P + +++ KAG RY
Sbjct: 20 CSAAGASSRRGMASAA------TPGLQYDVSESAGVKVANREVAGPTSTLALVAKAGPRY 73
Query: 180 E-TPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEI 238
+ P G + L A ST + + I R V+ GG + +T RE +V + + ++
Sbjct: 74 QPVP---GFSDALEQFAFKSTLKRSALRINREVELLGGEVSSTHSRENVVLKAKFLSGDL 130
Query: 239 GHVHKFLASVVGKTEFRPWEVSDLTPR-LKY 268
+ + LA V +T+F E+S++ + LKY
Sbjct: 131 PYFAELLAEVASQTKFAAHELSEVVLKTLKY 161
>gi|188589266|ref|YP_001921678.1| peptidase, M16 family [Clostridium botulinum E3 str. Alaska E43]
gi|188499547|gb|ACD52683.1| peptidase, M16 family [Clostridium botulinum E3 str. Alaska E43]
Length = 413
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 153 NKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQ 212
N ++V+++ + + IA I++ K GA E + GI+H + T + ++
Sbjct: 15 NGLEVITIKKDTQIASINIGVKVGAFNERLEEKGISHFIEHCLFKGTYTRNDEELNSDLE 74
Query: 213 QAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
GG A D + VYTI + +E + L+ ++ ++F E+
Sbjct: 75 SLGGEYNAYTDYDATVYTISCLMEEFNNGISILSDMIINSKFEESEI 121
>gi|425774117|gb|EKV12434.1| Ubiquinol-cytochrome C reductase complex core protein 2, putative
[Penicillium digitatum PHI26]
gi|425778570|gb|EKV16694.1| Ubiquinol-cytochrome C reductase complex core protein 2, putative
[Penicillium digitatum Pd1]
Length = 456
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Query: 122 SSSDVSAKRSFAA-QPATKALFSPDIQSGTS-YNKVKVVSVNETSPIARISVAFKAGARY 179
SS +A R+FAA + + + +P Q S + VKV + P +++ KAG+RY
Sbjct: 5 SSLSRNAPRAFAAGRRSMASAANPGFQYDVSEASGVKVANREVEGPTGTLALVAKAGSRY 64
Query: 180 ETPDNLGITHVLRSAAGLSTEEFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIG 239
+ G + L A +T + + I R + GG + +T RE IV + + K++
Sbjct: 65 QPFP--GFSDALDRFAFKTTLKRSALRITRETELLGGEISSTHSRENIVLRTKFLSKDLP 122
Query: 240 HVHKFLASVVGKTEFRPWEVSDLTPR-LKY 268
+ + LA V +T+F E++++ + LKY
Sbjct: 123 YFTELLAEVATQTKFADHELNEVVSKLLKY 152
>gi|119498709|ref|XP_001266112.1| ubiquinol-cytochrome C reductase complex core protein 2, putative
[Neosartorya fischeri NRRL 181]
gi|119414276|gb|EAW24215.1| ubiquinol-cytochrome C reductase complex core protein 2, putative
[Neosartorya fischeri NRRL 181]
Length = 460
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 143 SPDIQSGTSYNK-VKVVSVNETSPIARISVAFKAGARYE-TPDNLGITHVLRSAAGLSTE 200
+P +Q S + VKV + P +++ KAG+RY+ P G + L A ST
Sbjct: 31 TPGLQYDVSESAGVKVANREVAGPTGTLALVAKAGSRYQPFP---GFSDALEFFAFKSTL 87
Query: 201 EFTHFGIIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEVS 260
+ + I R V+ GG + +T RE +V + + K++ + + LA +T+F E++
Sbjct: 88 KRSALRITREVELLGGEVSSTHSRENVVLKAKFLSKDLPYFAELLAEAAFQTKFAGHELN 147
Query: 261 DLTPRL-KY 268
+L L KY
Sbjct: 148 ELVLNLIKY 156
>gi|322696530|gb|EFY88321.1| ubiquinol-cytochrome-c reductase complex core protein 2
[Metarhizium acridum CQMa 102]
Length = 458
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 13/110 (11%)
Query: 150 TSYNKVKVVSVNETSPIARISVAFKAGARYE-TPDNLGITHVLRSAAGLSTEEFTHFGII 208
T + +KV S + P ++ V KAG RY+ P G+T+ R +A I
Sbjct: 41 TDVSGLKVASRDAHGPTTKLVVVAKAGTRYQPLP---GLTNTQRRSA---------LRIT 88
Query: 209 RHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWE 258
R + GG L A+ RE +V +R+++ + + LA VV T++ E
Sbjct: 89 RESELLGGQLNASHTREALVLEASFLREDLPYFAELLAEVVSMTKYTTHE 138
>gi|401887660|gb|EJT51639.1| mtochondrial processing peptidase [Trichosporon asahii var. asahii
CBS 2479]
Length = 435
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%)
Query: 147 QSGTSYNKVKVVSVNETSPIARISVAFKAGARYETPDNLGITHVLRSAAGLSTEEFTHFG 206
Q T NKV+V + N + V AG+RYE+ + G +H+L A ST + T
Sbjct: 41 QVTTLPNKVRVATENIPGHFHSVGVYVDAGSRYESHKSSGTSHLLDRLAFKSTNKHTDDE 100
Query: 207 IIRHVQQAGGSLYATVDREGIVYTIEAVRKEIGHVHKFLASVVGKTEFRPWEV 259
+ V + G + + RE I+Y + + + ++S + P E+
Sbjct: 101 MTVLVDRLGSQMTCSSSRETIMYQSTVFPQSLPLALELMSSTILHPNLLPEEL 153
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.126 0.340
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,705,435,033
Number of Sequences: 23463169
Number of extensions: 203699033
Number of successful extensions: 5613990
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13126
Number of HSP's successfully gapped in prelim test: 2498
Number of HSP's that attempted gapping in prelim test: 4788094
Number of HSP's gapped (non-prelim): 496207
length of query: 318
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 176
effective length of database: 9,027,425,369
effective search space: 1588826864944
effective search space used: 1588826864944
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 77 (34.3 bits)