RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15803
(1045 letters)
>d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus
cuniculus) [TaxId: 9986]}
Length = 239
Score = 93.0 bits (230), Expect = 1e-21
Identities = 34/208 (16%), Positives = 56/208 (26%), Gaps = 37/208 (17%)
Query: 797 NPSIEPVVREFLTMLAVCHTVIPEM-KDGVLQYHASSPDEKALILGAKAFGYVFTS---- 851
+ E T+ A+C+ + + + E AL + T
Sbjct: 43 RSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNL 102
Query: 852 KHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNE-----IKVFCKGADNMIL 906
+ Q LEF+ DRK MSV ++ K+F KGA ++
Sbjct: 103 SKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVI 162
Query: 907 SRLDSH---SKYVDETKTHLEQ---------FASSGYRTLCFGVAKIPEEKYKNWSALYK 954
R + + V T E+ R L P ++ +
Sbjct: 163 DRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSS 222
Query: 955 NAATSMTNREERIAEVCEMIETKLHLLG 982
ET L +G
Sbjct: 223 RF---------------MEYETDLTFVG 235
Score = 30.6 bits (68), Expect = 0.83
Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 8/67 (11%)
Query: 408 KFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSIEPVVREFLTM 467
K DK ++ EF S+ G+ P V + + I + E T+
Sbjct: 5 KMFIIDKVDGDFCSLNEF---SITGSTYAPE---GEVLKNDKPI--RSGQFDGLVELATI 56
Query: 468 LAVCHTV 474
A+C+
Sbjct: 57 CALCNDS 63
>d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha
chain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 214
Score = 76.4 bits (187), Expect = 3e-16
Identities = 32/237 (13%), Positives = 61/237 (25%), Gaps = 51/237 (21%)
Query: 768 IWANGKDGGYLVLGNIVYTVTEQSRMIARNPSIEPVVREFLTMLAVCHTVIPEMKDGVLQ 827
+W + + I T + + A P + +C+ + + +
Sbjct: 7 MWFDNQ---------IHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENIS 57
Query: 828 YHAS----SPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRM 883
E AL+ + +++ R + + F S K
Sbjct: 58 VSKRDTAGDASESALLKCIELSCG-----SVRKMR-------DRNPKVAEISFNSTNKYQ 105
Query: 884 SVIVRTPQN--EIKVFCKGADNMILSRLD----------SHSKYVDETKTHLEQFASSGY 931
I N + KGA IL R + D + + G
Sbjct: 106 LSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGE 165
Query: 932 RTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVED 988
R L F +P K+ + + KL +G ++ D
Sbjct: 166 RVLGFCQLNLPSGKFPRG--------------FKFDTDELNFPTEKLCFVGLMSMID 208
>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546)
{Staphylococcus aureus [TaxId: 1280]}
Length = 380
Score = 55.6 bits (133), Expect = 1e-08
Identities = 28/260 (10%), Positives = 60/260 (23%), Gaps = 40/260 (15%)
Query: 767 TIWANGKDGGYLVLGNIVY---TVTE-QSRMIARNPSIEPVVREFLTMLAVCHTVIPEMK 822
T++ D YL L + + + R + ++ + ++ + +M
Sbjct: 25 TVYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNW---DML 81
Query: 823 DGVLQYHASSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKR 882
V H L E+++ + L +
Sbjct: 82 FIVFSIHLID---ILKKLSHDEIEAFMYQDEPVELKLQNIST--NLADCFNLNEQLPLQF 136
Query: 883 MSVIVRTPQNEIKVFCKGADNMILSRLDSHSKYVDETKTHLEQFASSGYRTLCFGVAKIP 942
+ + N + A + L + K L A Y+ G
Sbjct: 137 LDNVKVGKNNIYAALEEFAT----TELHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYE 192
Query: 943 EEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKLQEYVPETIAALI 1002
+ + K +K + E V + L
Sbjct: 193 DVEKKIARTTFKTGYIYQEIILRPVDE------------------------VKVLLNDLK 228
Query: 1003 KAKISVWVLTGDKKETAINI 1022
A + + TG +
Sbjct: 229 GAGFELGIATGRPYTETVVP 248
Score = 42.9 bits (100), Expect = 2e-04
Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 8/82 (9%)
Query: 572 AVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAH---VGV--GISGVEGL 626
A+ + + VN + V +GD D+ QK +G G+ G +
Sbjct: 293 ALYGNNRDKYESYINKQDNIVNKDDV-FIVGDSLADLLSAQKIGATFIGTLTGLKGKDAA 351
Query: 627 Q--AACASDYSIGQFRFLLKLL 646
A +DY I L +L
Sbjct: 352 GELEAHHADYVINHLGELRGVL 373
Score = 27.5 bits (60), Expect = 8.7
Identities = 6/68 (8%), Positives = 18/68 (26%), Gaps = 11/68 (16%)
Query: 402 EELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSIEPVV 461
LG+ + + + F + + + + + N + + +
Sbjct: 34 CYLGLHSHIDWETLTDNDIQDI-----------RNRIFQKDKILNKLKSLGLNSNWDMLF 82
Query: 462 REFLTMLA 469
F L
Sbjct: 83 IVFSIHLI 90
>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 217
Score = 48.4 bits (114), Expect = 1e-06
Identities = 18/97 (18%), Positives = 29/97 (29%), Gaps = 1/97 (1%)
Query: 548 GLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGAND 607
+ + L+ F + S + + L + IGDGA D
Sbjct: 120 NIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATD 179
Query: 608 VAMIQKAHVGVGISGVEGL-QAACASDYSIGQFRFLL 643
+ A +G G Q + + I F LL
Sbjct: 180 MEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELL 216
>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic
domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Length = 168
Score = 40.9 bits (95), Expect = 2e-04
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 988 DKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVGQDTPLLD 1037
D ++ V +I A I V ++TGD K TAI I + G++ + D
Sbjct: 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVAD 68
Score = 31.7 bits (71), Expect = 0.27
Identities = 26/109 (23%), Positives = 41/109 (37%), Gaps = 10/109 (9%)
Query: 534 LLGTTNNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVN 593
+ G G D E R A RV P K+++VE + +
Sbjct: 59 IFGENEEVADRAYTGREFDDLPLAEQR------EACRRACCFARVEPSHKSKIVEYLQ-S 111
Query: 594 TNSVTLAIGDGANDVAMIQKAHVGVGISGVEGLQAAC-ASDYSIGQFRF 641
+ +T GDG ND ++KA +G+ + G A AS+ + F
Sbjct: 112 YDEITAMTGDGVNDAPALKKAEIGIAMGS--GTAVAKTASEMVLADDNF 158
>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate
phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}
Length = 232
Score = 36.2 bits (82), Expect = 0.011
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 598 TLAIGDGANDVAMIQKAHVGVGISG 622
TL +GDG ND +++ V + G
Sbjct: 206 TLGLGDGPNDAPLLEVMDYAVIVKG 230
>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate
phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii
[TaxId: 53953]}
Length = 243
Score = 36.2 bits (82), Expect = 0.013
Identities = 23/228 (10%), Positives = 56/228 (24%), Gaps = 24/228 (10%)
Query: 406 MVKFVFSDKTGTLT------RNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSIEP 459
M++ +F D TL + G ++ N S+ A
Sbjct: 1 MIRLIFLDIDKTLIPGYEPDPAKPIIEELKDMGFEIIFN--------SSKTRAEQEYYRK 52
Query: 460 VVREFLTMLAVCHTVCSVAGNILVPNFNSNNVKEQSRMIARNPSIEPVVREFLTMLAVCH 519
+ ++ + + + +I +E + E + +
Sbjct: 53 ELEVETPFISENGSAIFIPKGYFPFDVKGKE-VGNYIVIELGIRVEKIREELKKLENIYG 111
Query: 520 TVYIELKHRTALASLLGTTNNNYALIIDGLALDYALK---HELRKDFLELCLT---CNAV 573
Y + + G L ++ + + + +E +
Sbjct: 112 LKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGWEEVLVEGGFKVTMGSRF 171
Query: 574 ICCRVSPLQKAEVVELVTV---NTNSVTLAIGDGANDVAMIQKAHVGV 618
+ + L+ + A+GD ND M +
Sbjct: 172 YTVHGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVF 219
>d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A
{Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Length = 115
Score = 33.5 bits (76), Expect = 0.026
Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 144 VIRNGMIYVEQ--WKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNL 201
V R V++ +D+ GDIV+V P D+ +LS + + + +
Sbjct: 5 VYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVI 64
Query: 202 K 202
K
Sbjct: 65 K 65
>d1ocsa_ d.189.1.1 (A:) Sorting nexin grd19 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 132
Score = 33.2 bits (75), Expect = 0.049
Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 70 TFFPCFLFEQF---RRYSNIFFLFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIE 126
T P F RRYS+ F L+++I ++ +P +++ E+IE
Sbjct: 37 TNLPSFHKRVSKVRRRYSDFEFFRKCLIKEISMLNHPKVMVPHLPGKILLSNRFSNEVIE 96
Query: 127 DIKRHL 132
+ ++ L
Sbjct: 97 ERRQGL 102
>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 206
Score = 33.7 bits (76), Expect = 0.070
Identities = 22/131 (16%), Positives = 38/131 (29%), Gaps = 9/131 (6%)
Query: 509 REFLTMLAVCHTVYIELKHRTALASLLGTTNNNYALIIDGLALDYALKHELRK------- 561
E L V LK + + ++I + +R+
Sbjct: 52 DEHGLKLGDIQEVIATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLL 111
Query: 562 -DFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGI 620
LE+ + V K + V + +A GD ND M+ +AH G+
Sbjct: 112 CHKLEIDDSDRVVGYQLRQKDPKRQSVIAFK-SLYYRVIAAGDSYNDTTMLSEAHAGILF 170
Query: 621 SGVEGLQAACA 631
E +
Sbjct: 171 HAPENVIREFP 181
>d2feaa1 c.108.1.20 (A:2-227)
2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate
phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}
Length = 226
Score = 33.8 bits (76), Expect = 0.077
Identities = 22/169 (13%), Positives = 50/169 (29%), Gaps = 13/169 (7%)
Query: 482 LVPNFNSNNVKEQSRMIARNPSIEPVVREFLTML--AVCHTVYIELKHRTALASLLGTTN 539
+ S+ +E + + + I REF+ + I + LL
Sbjct: 54 MFGLLPSSLKEEITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIV 113
Query: 540 NNYALIIDGLALDYALKHELRKDFLELCLTCNAVICC-RVSPLQKAEVVELVTVNTNSVT 598
+ + + D D++ + + C K V+ ++ N
Sbjct: 114 EKDRIYCNHASFD--------NDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEP-NQYI 164
Query: 599 LAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLL 646
+ IGD DV + + + + + + F + K +
Sbjct: 165 IMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEI 213
>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus
subtilis [TaxId: 1423]}
Length = 285
Score = 33.4 bits (75), Expect = 0.13
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 598 TLAIGDGANDVAMIQKAHVGV 618
T A+GD ND +M++ A GV
Sbjct: 232 TAAVGDSLNDKSMLEAAGKGV 252
>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase
{Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 135
Score = 32.0 bits (72), Expect = 0.15
Identities = 9/38 (23%), Positives = 14/38 (36%)
Query: 980 LLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKE 1017
D L+E + L + I V ++TGD
Sbjct: 12 GTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWR 49
>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon
Methanococcus jannaschii [TaxId: 2190]}
Length = 210
Score = 31.3 bits (69), Expect = 0.42
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 601 IGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLL 646
+GDGAND++M +KA + + L+ R +LK +
Sbjct: 164 VGDGANDISMFKKAGLKIAFCAKPILKEKADICIEKRDLREILKYI 209
>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase
{Pyrococcus horikoshii [TaxId: 53953]}
Length = 230
Score = 31.1 bits (69), Expect = 0.61
Identities = 29/255 (11%), Positives = 63/255 (24%), Gaps = 47/255 (18%)
Query: 407 VKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSIEPVVREFLT 466
+K + D GT+T N I E +
Sbjct: 2 IKAISIDIDGTITYP--------------------------------NRMIHEKALEAIR 29
Query: 467 MLA-VCHTVCSVAG---NILVPNFNSNNVKEQSRMIARNPSIEPVVREFLTMLAVCHTVY 522
+ + V G R FL + ++
Sbjct: 30 RAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILW 89
Query: 523 IELKHR-TALASLLGTTNNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPL 581
E++ R + + L+I ++ E+ + + ++ V
Sbjct: 90 NEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKP 149
Query: 582 QKAEVVELVTVN-----TNSVTLAIGDGANDVAMIQKAHVGVGIS-GVEGLQAAC----A 631
+ + + +GDG ND+ + V ++ + L+
Sbjct: 150 WINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTK 209
Query: 632 SDYSIGQFRFLLKLL 646
+Y G + +L
Sbjct: 210 KEYGEGGAEAIYHIL 224
>d1d1na_ b.43.3.1 (A:) Initiation factor IF2/eIF5b, domains 2 and 4
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 99
Score = 29.3 bits (66), Expect = 0.63
Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 8/42 (19%)
Query: 134 DGEINH-----RSVDVIRNGM---IYVEQWKDLKVGDIVKVY 167
+GEI+ V + G + ++ + D+K GD+++ Y
Sbjct: 50 EGEIDSLKRYKDDVREVAQGYECGLTIKNFNDIKEGDVIEAY 91
>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli
[TaxId: 562]}
Length = 271
Score = 31.1 bits (69), Expect = 0.64
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 598 TLAIGDGANDVAMIQKAHVGVGIS-GVEGLQAAC 630
+AIGD ND+AMI+ A VGV + + ++
Sbjct: 216 IMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVA 249
>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953
{Synechocystis sp. pcc 6803 [TaxId: 1148]}
Length = 244
Score = 30.8 bits (68), Expect = 0.75
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 573 VICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGV 618
++ R + + ++ S TL GD ND+ + + + GV
Sbjct: 156 LLPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGV 201
>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax
[TaxId: 5855]}
Length = 283
Score = 30.0 bits (66), Expect = 1.3
Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Query: 598 TLAIGDGANDVAMIQKAHVGVGIS-GVEGLQAAC----ASDYSIGQFRFLLKLLF 647
L +GD ND+AM+ ++ + ++ + G +LLK +F
Sbjct: 226 VLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVF 280
>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 29.9 bits (66), Expect = 1.4
Identities = 29/244 (11%), Positives = 64/244 (26%), Gaps = 48/244 (19%)
Query: 407 VKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNS--NNVQEQSRMIA----RNP-SIEP 459
VK + +D GT + A P F + ++++ +
Sbjct: 2 VKVIVTDMDGTFLND---------AKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLIS 52
Query: 460 VVREFLTMLAV----CHTVCSVAGNILVPNFNSNNVKEQSRMIARNPSIEPVVREFLTML 515
E ++ V + + + + ++ + V
Sbjct: 53 FFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGL---- 108
Query: 516 AVCHTVYIELKHRTALASLLGTTNNNYALIIDGLALD------------------YALKH 557
+ Y+ A +L+ + + D +D H
Sbjct: 109 ---QSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLH 165
Query: 558 ELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKA 614
++ + I + L KA + + + +AIGD ND M++ A
Sbjct: 166 VALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMA 225
Query: 615 HVGV 618
Sbjct: 226 RYSF 229
>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related
protein {Archaeon Thermoplasma acidophilum [TaxId:
2303]}
Length = 229
Score = 29.9 bits (66), Expect = 1.4
Identities = 13/53 (24%), Positives = 19/53 (35%)
Query: 600 AIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLLFVHGSW 652
GD A D A + + I EG A + R +LK + + G
Sbjct: 175 IAGDDATDEAAFEANDDALTIKVGEGETHAKFHVADYIEMRKILKFIEMLGVQ 227
>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 225
Score = 29.6 bits (65), Expect = 1.6
Identities = 20/234 (8%), Positives = 61/234 (26%), Gaps = 41/234 (17%)
Query: 406 MVKFVFSDKTGTLT--------RNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSI 457
M++ D G LT + + + G + +I ++
Sbjct: 2 MIRLAAIDVDGNLTDRDRLISTKAIESIRSAEKKGLTVSLL--------SGNVIPVVYAL 53
Query: 458 EPVVREFLTMLAVCHTVCSVAGNILVPNFNSNNVKEQSRMIARNPSIEPVVREFLTMLAV 517
+ + + + + F++ + +++ S+ ++ +
Sbjct: 54 KIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREAST 113
Query: 518 CHTVYIELKHRTALASLLGTTNNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCR 577
+ E + + + + G + + E + + ++
Sbjct: 114 GFDIDPEDVDYVRKEAE----SRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDE 169
Query: 578 VSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGIS-GVEGLQAAC 630
+ IGD ND+ M Q + + ++A
Sbjct: 170 IL--------------------VIGDSNNDMPMFQLPVRKACPANATDNIKAVS 203
>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga
maritima [TaxId: 2336]}
Length = 267
Score = 29.2 bits (64), Expect = 2.7
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 598 TLAIGDGANDVAMIQKAHVGV 618
+ GD ND+ M ++A + V
Sbjct: 209 IVVFGDNENDLFMFEEAGLRV 229
>d1qwda_ b.60.1.1 (A:) Outer membrane lipoprotein Blc {Escherichia
coli [TaxId: 562]}
Length = 167
Score = 28.6 bits (63), Expect = 2.7
Identities = 20/114 (17%), Positives = 36/114 (31%), Gaps = 10/114 (8%)
Query: 312 LLALCFISAAASTI---------WTLGRNAGDWYLLSRNP-SFHSNLLTFIILYNNLIPI 361
L + ++ST + R G WY ++R F L Y+
Sbjct: 2 LESTSLYKKSSSTPPRGVTVVNNFDAKRYLGTWYEIARFDHRFERGLEKVTATYSLRDDG 61
Query: 362 SLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKT 415
L V + + + ++ Y+ T AA + S G + D+
Sbjct: 62 GLNVINKGYNPDRGMWQQSEGKAYFTGAPTRAALKVSFFGPFYGGYNVIALDRE 115
>d1y5ic1 f.21.3.1 (C:1-225) Respiratory nitrate reductase 1 gamma
chain {Escherichia coli [TaxId: 562]}
Length = 225
Score = 28.7 bits (64), Expect = 3.2
Identities = 12/96 (12%), Positives = 28/96 (29%), Gaps = 14/96 (14%)
Query: 697 LYNVLFTAFPPLAIGILDQVCSARTRLKYPILYSQTANTFNVKIF---WIWIGNALFHSM 753
L F +P +A + + + R Y T + ++ + + + LFH +
Sbjct: 4 LNMFFFDIYPYIAGAVF--LIGSWLRYDY---GQYTWRAASSQMLDRKGMNLASNLFH-I 57
Query: 754 LMFWI-----PMLIYGQGTIWANGKDGGYLVLGNIV 784
+ I ++ A +
Sbjct: 58 GILGIFVGHFFGMLTPHWMYEAWLPIEVAQKMAMFA 93
>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131
{Bacteroides thetaiotaomicron [TaxId: 818]}
Length = 260
Score = 28.7 bits (63), Expect = 3.2
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 600 AIGDGANDVAMIQKAHVGV 618
+ GDG ND++M++ A +GV
Sbjct: 207 SFGDGGNDISMLRHAAIGV 225
>d1rp4a_ a.227.1.1 (A:) Endoplasmic oxidoreductin 1, Ero1p {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 374
Score = 28.7 bits (64), Expect = 4.3
Identities = 12/97 (12%), Positives = 38/97 (39%), Gaps = 6/97 (6%)
Query: 43 HRVIN-----INAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQI 97
+R+++ I S +++ K + +L F R +N++F + + + +
Sbjct: 171 YRLVSGFHASIGTHLSKEYLNTKTGKWEPNLDLFMARIG-NFPDRVTNMYFNYAVVAKAL 229
Query: 98 PDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLAD 134
+ P + L+ + + + +I + + +
Sbjct: 230 WKIQPYLPEFSFCDLVNKEIKNKMDNVISQLDTKIFN 266
>d1kmda_ d.189.1.1 (A:) Vam7p {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 117
Score = 27.3 bits (60), Expect = 4.7
Identities = 8/59 (13%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
Query: 77 FEQFRRYSNIFFLFIALLQQIPDV-SPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLAD 134
++RYS + L L + + + E+I++ + L
Sbjct: 29 KRLYKRYSEFWKLKTRLERDVGSTIPYDFPEKPGVLDRRWQRRYDDPEMIDERRIGLER 87
>d2fvta1 c.103.1.1 (A:1-127) Hypothetical protein RPA2829
{Rhodopseudomonas palustris [TaxId: 1076]}
Length = 127
Score = 27.1 bits (60), Expect = 5.4
Identities = 11/58 (18%), Positives = 18/58 (31%), Gaps = 3/58 (5%)
Query: 349 LTFIILYNNLIPISLQVTLEIVRFIQATFIN--NDMDMYYEPTDTPAAARTSN-LNEE 403
L + N I + T V +++ + T A RT N + E
Sbjct: 58 LQRVFDNANAIDTLIVGTGADVWIAPRQLREALRGVNVVLDTMQTGPAIRTYNIMIGE 115
>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Human (Homo sapiens), mitochondrial [TaxId: 9606]}
Length = 494
Score = 28.1 bits (62), Expect = 6.9
Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 9/75 (12%)
Query: 87 FFLFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRH---LA------DGEI 137
+F+ + + D + P++ I+ I+E++ LA D +
Sbjct: 373 YFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDK 432
Query: 138 NHRSVDVIRNGMIYV 152
+ ++ G ++V
Sbjct: 433 ANYLSQALQAGTVWV 447
>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Baltic cod (Gadus callarias) [TaxId: 8053]}
Length = 503
Score = 27.7 bits (61), Expect = 8.0
Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 9/75 (12%)
Query: 87 FFLFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRH---LA------DGEI 137
+F+ +L D + P++ ++ +E+++ LA D
Sbjct: 380 YFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISR 439
Query: 138 NHRSVDVIRNGMIYV 152
HR + G Y+
Sbjct: 440 AHRVAANLEAGTCYI 454
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.136 0.406
Gapped
Lambda K H
0.267 0.0522 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,836,009
Number of extensions: 183496
Number of successful extensions: 534
Number of sequences better than 10.0: 1
Number of HSP's gapped: 525
Number of HSP's successfully gapped: 41
Length of query: 1045
Length of database: 2,407,596
Length adjustment: 95
Effective length of query: 950
Effective length of database: 1,103,246
Effective search space: 1048083700
Effective search space used: 1048083700
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.6 bits)