Your job contains 1 sequence.
>psy15804
VEITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTW
SEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERS
YLMKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRS
PRFSSFSLYGVRR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15804
(193 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0011703 - symbol:RnrL "Ribonucleoside diphosphate ... 614 6.4e-60 1
MGI|MGI:98180 - symbol:Rrm1 "ribonucleotide reductase M1"... 601 1.5e-58 1
RGD|1592569 - symbol:Rrm1 "ribonucleotide reductase M1" s... 599 2.5e-58 1
UNIPROTKB|E2R8P1 - symbol:RRM1 "Ribonucleoside-diphosphat... 597 4.0e-58 1
UNIPROTKB|P23921 - symbol:RRM1 "Ribonucleoside-diphosphat... 594 8.4e-58 1
POMBASE|SPAC1F7.05 - symbol:cdc22 "ribonucleoside reducta... 594 8.4e-58 1
UNIPROTKB|F1MSF1 - symbol:RRM1 "Ribonucleoside-diphosphat... 593 1.1e-57 1
ZFIN|ZDB-GENE-990415-247 - symbol:rrm1 "ribonucleotide re... 593 1.1e-57 1
UNIPROTKB|Q5R919 - symbol:RRM1 "Ribonucleoside-diphosphat... 589 2.8e-57 1
UNIPROTKB|E1C4Q0 - symbol:E1C4Q0 "Ribonucleoside-diphosph... 586 5.9e-57 1
ASPGD|ASPL0000074083 - symbol:AN4380 species:162425 "Emer... 575 2.2e-55 1
SGD|S000000872 - symbol:RNR1 "Major isoform of large subu... 565 3.6e-54 1
CGD|CAL0001524 - symbol:RNR1 species:5476 "Candida albica... 551 9.7e-53 1
UNIPROTKB|Q5A0N3 - symbol:RNR1 "Ribonucleoside-diphosphat... 551 9.7e-53 1
UNIPROTKB|Q9UW15 - symbol:rnr-1 "Ribonucleoside-diphospha... 550 2.1e-52 1
SGD|S000001328 - symbol:RNR3 "Minor isoform of the large ... 545 5.1e-52 1
WB|WBGene00004391 - symbol:rnr-1 species:6239 "Caenorhabd... 530 1.0e-50 1
UNIPROTKB|Q03604 - symbol:rnr-1 "Ribonucleoside-diphospha... 530 1.0e-50 1
TAIR|locus:2052469 - symbol:RNR1 "ribonucleotide reductas... 511 1.9e-48 1
DICTYBASE|DDB_G0284071 - symbol:rnrA "ribonucleoside-diph... 511 2.8e-48 1
UNIPROTKB|P50648 - symbol:RNR1 "Ribonucleoside-diphosphat... 436 3.0e-40 1
UNIPROTKB|O61065 - symbol:RNR1 "Ribonucleoside-diphosphat... 416 4.4e-38 1
UNIPROTKB|E9PD78 - symbol:RRM1 "Ribonucleoside-diphosphat... 413 5.1e-38 1
UNIPROTKB|P50647 - symbol:RNR1 "Ribonucleoside-diphosphat... 408 3.2e-37 1
UNIPROTKB|O15909 - symbol:RNR1 "Ribonucleoside-diphosphat... 350 6.5e-31 1
CGD|CAL0002354 - symbol:RNR3 species:5476 "Candida albica... 294 6.5e-25 1
UNIPROTKB|Q59M54 - symbol:RNR3 "Ribonucleoside-diphosphat... 294 6.5e-25 1
UNIPROTKB|F1SUZ5 - symbol:F1SUZ5 "Uncharacterized protein... 274 8.5e-23 1
UNIPROTKB|Q8SR37 - symbol:ECU10_0920 "Ribonucleoside-diph... 251 2.4e-20 1
UNIPROTKB|I3LEK6 - symbol:I3LEK6 "Ribonucleoside-diphosph... 158 1.3e-11 1
UNIPROTKB|Q48FF6 - symbol:nrdA "Ribonucleoside-diphosphat... 122 5.7e-05 1
UNIPROTKB|Q886B0 - symbol:nrdA "Ribonucleoside-diphosphat... 122 5.7e-05 1
UNIPROTKB|Q607W9 - symbol:nrdA "Ribonucleoside-diphosphat... 116 0.00032 1
>FB|FBgn0011703 [details] [associations]
symbol:RnrL "Ribonucleoside diphosphate reductase large
subunit" species:7227 "Drosophila melanogaster" [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=ISS]
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS;NAS] [GO:0006260
"DNA replication" evidence=IEA;NAS] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0042246 "tissue regeneration" evidence=IMP] InterPro:IPR000788
InterPro:IPR008926 InterPro:IPR013346 InterPro:IPR013509
Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183 PROSITE:PS00089
UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524 EMBL:AE014134
GO:GO:0006260 GO:GO:0006919 GO:GO:0042246 GO:GO:0009263 KO:K10807
InterPro:IPR005144 PROSITE:PS51161 eggNOG:COG0209 GO:GO:0005971
GO:GO:0004748 SUPFAM:SSF48168 TIGRFAMs:TIGR02506
GeneTree:ENSGT00390000001372 OMA:YKYGVKT EMBL:AF132143
EMBL:AY119149 EMBL:U09369 RefSeq:NP_477027.1 UniGene:Dm.3216
ProteinModelPortal:P48591 SMR:P48591 DIP:DIP-19582N
MINT:MINT-829510 STRING:P48591 PaxDb:P48591
EnsemblMetazoa:FBtr0080059 GeneID:34392 KEGG:dme:Dmel_CG5371
CTD:34392 FlyBase:FBgn0011703 InParanoid:P48591 OrthoDB:EOG4XKSNZ
PhylomeDB:P48591 GenomeRNAi:34392 NextBio:788275 Bgee:P48591
GermOnline:CG5371 Uniprot:P48591
Length = 812
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 119/185 (64%), Positives = 144/185 (77%)
Query: 1 VEITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTW 60
V ITL+VI GLY GVTT +LDNLAAE AA HPDYA+L + NLHKETKK +
Sbjct: 48 VTITLQVINGLYCGVTTQELDNLAAEIAAGLT-CNHPDYAIL-AARIAVSNLHKETKKAF 105
Query: 61 SEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERS 120
S+V E+LYN VNKET + P++S+ HY ++ KNA RLNS+IIYDRDF YN+FGFKTLERS
Sbjct: 106 SDVFEDLYNHVNKETNQKVPLVSEFHYNVVKKNATRLNSSIIYDRDFGYNYFGFKTLERS 165
Query: 121 YLMKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRS 180
YL+K NG++ ERPQHMLMRVA+GIHGEDIDAA+ETYNLLSE+YFTHA+ + A +
Sbjct: 166 YLLKRNGKIAERPQHMLMRVAIGIHGEDIDAAVETYNLLSERYFTHASPTLFA--AATNR 223
Query: 181 PRFSS 185
P+ SS
Sbjct: 224 PQLSS 228
>MGI|MGI:98180 [details] [associations]
symbol:Rrm1 "ribonucleotide reductase M1" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate
reductase complex" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=IDA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0017076 "purine nucleotide binding" evidence=IDA] [GO:0051259
"protein oligomerization" evidence=IPI] [GO:0051290 "protein
heterotetramerization" evidence=IPI] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR000788
InterPro:IPR008926 InterPro:IPR013346 InterPro:IPR013509
Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183 PROSITE:PS00089
UniPathway:UPA00326 MGI:MGI:98180 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 EMBL:CH466531 GO:GO:0051290 GO:GO:0017076
GO:GO:0009263 KO:K10807 InterPro:IPR005144 PROSITE:PS51161
eggNOG:COG0209 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
HOGENOM:HOG000057035 TIGRFAMs:TIGR02506
GeneTree:ENSGT00390000001372 OMA:YKYGVKT CTD:6240
HOVERGEN:HBG003447 OrthoDB:EOG4ZW59G EMBL:K02927 EMBL:AK088043
EMBL:AK137075 EMBL:AK168586 EMBL:BC016450 IPI:IPI00315127
PIR:A24050 RefSeq:NP_033129.2 UniGene:Mm.197486 UniGene:Mm.415177
ProteinModelPortal:P07742 SMR:P07742 STRING:P07742
PhosphoSite:P07742 PaxDb:P07742 PRIDE:P07742
Ensembl:ENSMUST00000033283 GeneID:20133 KEGG:mmu:20133
InParanoid:Q91YM8 BindingDB:P07742 ChEMBL:CHEMBL3739 NextBio:297643
Bgee:P07742 CleanEx:MM_RRM1 Genevestigator:P07742
GermOnline:ENSMUSG00000030978 Uniprot:P07742
Length = 792
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 119/191 (62%), Positives = 148/191 (77%)
Query: 2 EITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTWS 61
+IT+KVI+GLY GVTTV+LD LAAETAA KHPDYA+L + NLHKETKK +S
Sbjct: 38 QITMKVIQGLYSGVTTVELDTLAAETAATLTT-KHPDYAIL-AARIAVSNLHKETKKVFS 95
Query: 62 EVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERSY 121
+V+E+LYN +N G +PM++ +I+M N DRLNSAIIYDRDF+YN+FGFKTLERSY
Sbjct: 96 DVMEDLYNYINPHNGRHSPMVASSTLDIVMANKDRLNSAIIYDRDFSYNYFGFKTLERSY 155
Query: 122 LMKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRSP 181
L+K NG+V ERPQHMLMRV+VGIH EDIDAAIETYNLLSEK+FTHA+ + +A + P
Sbjct: 156 LLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSEKWFTHASPTLF--NAGTNRP 213
Query: 182 RFSSFSLYGVR 192
+ SS L ++
Sbjct: 214 QLSSCFLLSMK 224
>RGD|1592569 [details] [associations]
symbol:Rrm1 "ribonucleotide reductase M1" species:10116 "Rattus
norvegicus" [GO:0000278 "mitotic cell cycle" evidence=IEP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006206 "pyrimidine nucleobase metabolic process" evidence=IEP]
[GO:0008584 "male gonad development" evidence=IEP] [GO:0010212
"response to ionizing radiation" evidence=IEP] [GO:0021846 "cell
proliferation in forebrain" evidence=IEP] [GO:0042995 "cell
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEP] InterPro:IPR000788 InterPro:IPR008926
InterPro:IPR013346 InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867
PRINTS:PR01183 PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477
RGD:1592569 GO:GO:0005524 GO:GO:0005737 GO:GO:0005635 GO:GO:0006260
GO:GO:0043025 GO:GO:0006206 EMBL:CH473956 GO:GO:0010212
GO:GO:0008584 GO:GO:0060041 GO:GO:0042995 GO:GO:0021846
GO:GO:0000278 KO:K10807 InterPro:IPR005144 PROSITE:PS51161
GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168 TIGRFAMs:TIGR02506
CTD:6240 HOVERGEN:HBG003447 EMBL:BC085906 IPI:IPI00361151
RefSeq:NP_001013254.1 UniGene:Rn.162454 SMR:Q5U2Q5 GeneID:685579
KEGG:rno:685579 ChEMBL:CHEMBL5130 NextBio:729994
Genevestigator:Q5U2Q5 Uniprot:Q5U2Q5
Length = 792
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 119/191 (62%), Positives = 148/191 (77%)
Query: 2 EITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTWS 61
+IT+KVI+GLY GVTTV+LD LAAETAA KHPDYA+L + NLHKETKK +S
Sbjct: 38 QITMKVIQGLYSGVTTVELDTLAAETAATLTT-KHPDYAIL-AARIAVSNLHKETKKVFS 95
Query: 62 EVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERSY 121
+V+E+LYN +N G +PM++ EI+M + DRLNSAIIYDRDF+YN+FGFKTLERSY
Sbjct: 96 DVMEDLYNYINPHNGRHSPMVASSTLEIVMAHKDRLNSAIIYDRDFSYNYFGFKTLERSY 155
Query: 122 LMKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRSP 181
L+K NG+V ERPQHMLMRV+VGIH EDIDAAIETYNLLSEK+FTHA+ + +A + P
Sbjct: 156 LLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSEKWFTHASPTLF--NAGTNRP 213
Query: 182 RFSSFSLYGVR 192
+ SS L ++
Sbjct: 214 QLSSCFLLSMK 224
>UNIPROTKB|E2R8P1 [details] [associations]
symbol:RRM1 "Ribonucleoside-diphosphate reductase"
species:9615 "Canis lupus familiaris" [GO:0006260 "DNA replication"
evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0009263 "deoxyribonucleotide biosynthetic
process" evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate
reductase activity, thioredoxin disulfide as acceptor"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 GO:GO:0051290 GO:GO:0009263 KO:K10807
InterPro:IPR005144 PROSITE:PS51161 GO:GO:0005971 GO:GO:0004748
SUPFAM:SSF48168 OMA:PQARNSN TIGRFAMs:TIGR02506
GeneTree:ENSGT00390000001372 CTD:6240 EMBL:AAEX03012836
RefSeq:XP_534027.2 Ensembl:ENSCAFT00000009652 GeneID:476823
KEGG:cfa:476823 NextBio:20852423 Uniprot:E2R8P1
Length = 792
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 118/191 (61%), Positives = 148/191 (77%)
Query: 2 EITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTWS 61
+IT+KVI+GLY GVTTV+LD LAAETAA KHPDYA+L + NLHKETKK +S
Sbjct: 38 QITMKVIQGLYSGVTTVELDTLAAETAATLTT-KHPDYAIL-AARIAVSNLHKETKKVFS 95
Query: 62 EVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERSY 121
+V+E+LYN +N G +PM++ +I++ N DRLNSAIIYDRDF+YN+FGFKTLERSY
Sbjct: 96 DVMEDLYNYINPHNGRHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSY 155
Query: 122 LMKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRSP 181
L+K NG+V ERPQHMLMRV+VGIH EDIDAAIETYNLLSEK+FTHA+ + +A + P
Sbjct: 156 LLKINGKVAERPQHMLMRVSVGIHEEDIDAAIETYNLLSEKWFTHASPTLF--NAGTNRP 213
Query: 182 RFSSFSLYGVR 192
+ SS L ++
Sbjct: 214 QLSSCFLLSMK 224
>UNIPROTKB|P23921 [details] [associations]
symbol:RRM1 "Ribonucleoside-diphosphate reductase large
subunit" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=NAS] [GO:0006260 "DNA replication"
evidence=IEA;NAS] [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=ISS;NAS]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0055086 "nucleobase-containing
small molecule metabolic process" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] Reactome:REACT_111217
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005829
GO:GO:0005524 GO:GO:0005654 GO:GO:0006260 DrugBank:DB01073
GO:GO:0051290 GO:GO:0015949 DrugBank:DB00441 DrugBank:DB00631
GO:GO:0009263 KO:K10807 InterPro:IPR005144 PROSITE:PS51161
eggNOG:COG0209 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
HOGENOM:HOG000057035 OMA:PQARNSN TIGRFAMs:TIGR02506 CTD:6240
HOVERGEN:HBG003447 OrthoDB:EOG4ZW59G EMBL:X59543 EMBL:X59617
EMBL:AF107045 EMBL:BC006498 EMBL:L10342 IPI:IPI00013871 PIR:S16680
RefSeq:NP_001024.1 UniGene:Hs.445705 PDB:2WGH PDB:3HNC PDB:3HND
PDB:3HNE PDB:3HNF PDBsum:2WGH PDBsum:3HNC PDBsum:3HND PDBsum:3HNE
PDBsum:3HNF ProteinModelPortal:P23921 SMR:P23921 DIP:DIP-24233N
IntAct:P23921 MINT:MINT-1406473 STRING:P23921 PhosphoSite:P23921
DMDM:132608 PaxDb:P23921 PeptideAtlas:P23921 PRIDE:P23921
DNASU:6240 Ensembl:ENST00000300738 GeneID:6240 KEGG:hsa:6240
UCSC:uc001lyw.4 GeneCards:GC11P004115 HGNC:HGNC:10451 HPA:CAB022093
MIM:180410 neXtProt:NX_P23921 PharmGKB:PA298 InParanoid:P23921
PhylomeDB:P23921 BindingDB:P23921 ChEMBL:CHEMBL1830 ChiTaRS:RRM1
DrugBank:DB01005 EvolutionaryTrace:P23921 GenomeRNAi:6240
NextBio:24233 ArrayExpress:P23921 Bgee:P23921 CleanEx:HS_RRM1
Genevestigator:P23921 GermOnline:ENSG00000167325 Uniprot:P23921
Length = 792
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 117/191 (61%), Positives = 148/191 (77%)
Query: 2 EITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTWS 61
+IT+KVI+GLY GVTTV+LD LAAETAA KHPDYA+L + NLHKETKK +S
Sbjct: 38 QITMKVIQGLYSGVTTVELDTLAAETAATLTT-KHPDYAIL-AARIAVSNLHKETKKVFS 95
Query: 62 EVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERSY 121
+V+E+LYN +N G +PM++ +I++ N DRLNSAIIYDRDF+YN+FGFKTLERSY
Sbjct: 96 DVMEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSY 155
Query: 122 LMKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRSP 181
L+K NG+V ERPQHMLMRV+VGIH EDIDAAIETYNLLSE++FTHA+ + +A + P
Sbjct: 156 LLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLF--NAGTNRP 213
Query: 182 RFSSFSLYGVR 192
+ SS L ++
Sbjct: 214 QLSSCFLLSMK 224
>POMBASE|SPAC1F7.05 [details] [associations]
symbol:cdc22 "ribonucleoside reductase large subunit
Cdc22" species:4896 "Schizosaccharomyces pombe" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=IEA] [GO:0006213 "pyrimidine nucleoside metabolic
process" evidence=IC] [GO:0007090 "regulation of S phase of mitotic
cell cycle" evidence=IMP] [GO:0009212 "pyrimidine
deoxyribonucleoside triphosphate biosynthetic process" evidence=IC]
[GO:0009216 "purine deoxyribonucleoside triphosphate biosynthetic
process" evidence=IC] [GO:0009263 "deoxyribonucleotide biosynthetic
process" evidence=ISS] [GO:0042278 "purine nucleoside metabolic
process" evidence=IC] [GO:0090329 "regulation of DNA-dependent DNA
replication" evidence=IMP] InterPro:IPR000788 InterPro:IPR008926
InterPro:IPR013346 InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867
PRINTS:PR01183 PROSITE:PS00089 UniPathway:UPA00326
PomBase:SPAC1F7.05 Pfam:PF03477 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006260 GO:GO:0007090
GO:GO:0090329 GO:GO:0006213 GO:GO:0009263 KO:K10807 GO:GO:0042278
InterPro:IPR005144 PROSITE:PS51161 eggNOG:COG0209 GO:GO:0005971
GO:GO:0004748 SUPFAM:SSF48168 HOGENOM:HOG000057035 OMA:PQARNSN
TIGRFAMs:TIGR02506 OrthoDB:EOG480N4T EMBL:X65116 PIR:S34807
PIR:S62577 RefSeq:NP_594491.1 ProteinModelPortal:P36602 SMR:P36602
IntAct:P36602 STRING:P36602 PRIDE:P36602 EnsemblFungi:SPAC1F7.05.1
GeneID:2541695 KEGG:spo:SPAC1F7.05 NextBio:20802788 GO:GO:0009216
GO:GO:0009212 Uniprot:P36602
Length = 811
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 116/185 (62%), Positives = 148/185 (80%)
Query: 1 VEITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTW 60
VEIT KVI G+YPGVTT++LDNLAAETAA KHPDYA+L + NLHK+T+K +
Sbjct: 37 VEITQKVISGVYPGVTTIELDNLAAETAATMTT-KHPDYAIL-AARIAVSNLHKQTEKVF 94
Query: 61 SEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERS 120
S V+++L++ VN +T PMISDK Y+I+MK+ D L+SAIIYDRDF YNFFGFKTLERS
Sbjct: 95 STVVQQLHDYVNPKTDKPAPMISDKIYDIVMKHKDELDSAIIYDRDFTYNFFGFKTLERS 154
Query: 121 YLMKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRS 180
YL++ +G+V ERPQHM+MRVAVGIHGEDI+AAIETYNL+S++YFTHA+ + +A +
Sbjct: 155 YLLRIDGKVAERPQHMIMRVAVGIHGEDIEAAIETYNLMSQRYFTHASPTLF--NAGTPR 212
Query: 181 PRFSS 185
P+ SS
Sbjct: 213 PQLSS 217
>UNIPROTKB|F1MSF1 [details] [associations]
symbol:RRM1 "Ribonucleoside-diphosphate reductase"
species:9913 "Bos taurus" [GO:0006260 "DNA replication"
evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0009263 "deoxyribonucleotide biosynthetic
process" evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate
reductase activity, thioredoxin disulfide as acceptor"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 GO:GO:0051290 GO:GO:0009263 InterPro:IPR005144
PROSITE:PS51161 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
OMA:PQARNSN TIGRFAMs:TIGR02506 GeneTree:ENSGT00390000001372
EMBL:DAAA02040985 EMBL:DAAA02040986 IPI:IPI00884866
UniGene:Bt.12465 Ensembl:ENSBTAT00000017428 Uniprot:F1MSF1
Length = 791
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 117/191 (61%), Positives = 148/191 (77%)
Query: 2 EITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTWS 61
+IT+KVI+GLY GVTTV+LD LAAETAA KHPDYA+L + NLHKETKK +S
Sbjct: 38 QITMKVIQGLYSGVTTVELDTLAAETAATLTT-KHPDYAIL-AARIAVSNLHKETKKVFS 95
Query: 62 EVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERSY 121
+V+E+L+N +N G +PM++ +I++ N DRLNSAIIYDRDF+YN+FGFKTLERSY
Sbjct: 96 DVMEDLFNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSY 155
Query: 122 LMKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRSP 181
L+K NG+V ERPQHMLMRV+VGIH EDIDAAIETYNLLSEK+FTHA+ + +A + P
Sbjct: 156 LLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSEKWFTHASPTLF--NAGTNRP 213
Query: 182 RFSSFSLYGVR 192
+ SS L ++
Sbjct: 214 QLSSCFLLSMK 224
>ZFIN|ZDB-GENE-990415-247 [details] [associations]
symbol:rrm1 "ribonucleotide reductase M1
polypeptide" species:7955 "Danio rerio" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA;ISS] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009263 "deoxyribonucleotide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] InterPro:IPR000788 InterPro:IPR008926
InterPro:IPR013346 InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867
PRINTS:PR01183 PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477
ZFIN:ZDB-GENE-990415-247 GO:GO:0005524 GO:GO:0006260 GO:GO:0009263
KO:K10807 InterPro:IPR005144 PROSITE:PS51161 eggNOG:COG0209
GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168 HOGENOM:HOG000057035
TIGRFAMs:TIGR02506 EMBL:U57964 IPI:IPI00482388 RefSeq:NP_571530.1
UniGene:Dr.33356 ProteinModelPortal:P79732 SMR:P79732 STRING:P79732
PRIDE:P79732 GeneID:30740 KEGG:dre:30740 CTD:6240
HOVERGEN:HBG003447 InParanoid:P79732 OrthoDB:EOG4ZW59G
NextBio:20807088 ArrayExpress:P79732 Uniprot:P79732
Length = 794
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 121/191 (63%), Positives = 147/191 (76%)
Query: 2 EITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTWS 61
+IT+KVI+GLY GVTTV+LD LAAETAA KHPDYA+L + NLHKETKK +S
Sbjct: 38 QITMKVIQGLYSGVTTVELDTLAAETAAT-STTKHPDYAIL-AARIAVSNLHKETKKVFS 95
Query: 62 EVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERSY 121
EV+E+LYN VN +PMIS + +I++ N DRLNSAIIYDRDF+YNFFGFKTLERSY
Sbjct: 96 EVMEDLYNYVNPLNSRHSPMISKETLDIVLANKDRLNSAIIYDRDFSYNFFGFKTLERSY 155
Query: 122 LMKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRSP 181
L+K NG+V ERPQHMLMRV+VGIH EDI AAIETYNLLSEK+FTHA+ + +A + P
Sbjct: 156 LLKINGKVAERPQHMLMRVSVGIHKEDIAAAIETYNLLSEKWFTHASPTLF--NAGTNRP 213
Query: 182 RFSSFSLYGVR 192
+ SS L ++
Sbjct: 214 QLSSCFLLAMK 224
>UNIPROTKB|Q5R919 [details] [associations]
symbol:RRM1 "Ribonucleoside-diphosphate reductase large
subunit" species:9601 "Pongo abelii" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 GO:GO:0009263 KO:K10807 InterPro:IPR005144
PROSITE:PS51161 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
TIGRFAMs:TIGR02506 CTD:6240 HOVERGEN:HBG003447 HSSP:P21524
EMBL:CR859577 RefSeq:NP_001126012.1 UniGene:Pab.9179
ProteinModelPortal:Q5R919 SMR:Q5R919 PRIDE:Q5R919 GeneID:100172956
KEGG:pon:100172956 InParanoid:Q5R919 Uniprot:Q5R919
Length = 792
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 116/191 (60%), Positives = 147/191 (76%)
Query: 2 EITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTWS 61
+IT+KVI+GLY GVTTV+LD LAAETAA KHPDYA+L + NLHKE KK +S
Sbjct: 38 QITMKVIQGLYSGVTTVELDTLAAETAATLTT-KHPDYAIL-AARIAVSNLHKEAKKVFS 95
Query: 62 EVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERSY 121
+V+E+LYN +N G +PM++ +I++ N DRLNSAIIYDRDF+YN+FGFKTLERSY
Sbjct: 96 DVMEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSY 155
Query: 122 LMKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRSP 181
L+K NG+V ERPQHMLMRV+VGIH EDIDAAIETYNLLSE++FTHA+ + +A + P
Sbjct: 156 LLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLF--NAGTNRP 213
Query: 182 RFSSFSLYGVR 192
+ SS L ++
Sbjct: 214 QLSSCFLLSMK 224
>UNIPROTKB|E1C4Q0 [details] [associations]
symbol:E1C4Q0 "Ribonucleoside-diphosphate reductase"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate
reductase activity, thioredoxin disulfide as acceptor"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] InterPro:IPR000788 InterPro:IPR008926
InterPro:IPR013346 InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867
PRINTS:PR01183 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 GO:GO:0051290 GO:GO:0009263 InterPro:IPR005144
PROSITE:PS51161 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
OMA:PQARNSN TIGRFAMs:TIGR02506 GeneTree:ENSGT00390000001372
EMBL:AADN02055234 EMBL:AADN02055235 EMBL:AADN02055236
IPI:IPI00580561 Ensembl:ENSGALT00000028034 Uniprot:E1C4Q0
Length = 784
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 116/184 (63%), Positives = 144/184 (78%)
Query: 2 EITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTWS 61
+IT+KVI+GLY GVTTV+LD LAAETAA KHPDYA+L + NLHKETKK +S
Sbjct: 38 QITMKVIQGLYSGVTTVELDTLAAETAATLTT-KHPDYAIL-AARIAVSNLHKETKKVFS 95
Query: 62 EVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERSY 121
+V+++LYN +N G +PMIS + +I++ N DRLNSAIIYDRDF+YN+FGFKTLERSY
Sbjct: 96 DVMDDLYNYINPHNGKHSPMISKETLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSY 155
Query: 122 LMKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRSP 181
L+K N +V ERPQHMLMRVAVGIH DIDAAIETYNLLSE++FTHA+ + +A + P
Sbjct: 156 LLKINSKVAERPQHMLMRVAVGIHKNDIDAAIETYNLLSERWFTHASPTLF--NAGTNRP 213
Query: 182 RFSS 185
+ SS
Sbjct: 214 QLSS 217
>ASPGD|ASPL0000074083 [details] [associations]
symbol:AN4380 species:162425 "Emericella nidulans"
[GO:0043173 "nucleotide salvage" evidence=RCA] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA;RCA] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=IEA]
[GO:0090329 "regulation of DNA-dependent DNA replication"
evidence=IEA] [GO:0007090 "regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR000788
InterPro:IPR008926 InterPro:IPR013346 InterPro:IPR013509
Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183 PROSITE:PS00089
UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524 GO:GO:0006260
EMBL:BN001303 EMBL:AACD01000076 KO:K10807 InterPro:IPR005144
PROSITE:PS51161 eggNOG:COG0209 GO:GO:0005971 GO:GO:0004748
SUPFAM:SSF48168 HOGENOM:HOG000057035 TIGRFAMs:TIGR02506 OMA:YKYGVKT
OrthoDB:EOG480N4T RefSeq:XP_661984.1 ProteinModelPortal:Q5B500
SMR:Q5B500 STRING:Q5B500 EnsemblFungi:CADANIAT00006078
GeneID:2872173 KEGG:ani:AN4380.2 Uniprot:Q5B500
Length = 865
Score = 575 (207.5 bits), Expect = 2.2e-55, P = 2.2e-55
Identities = 114/190 (60%), Positives = 146/190 (76%)
Query: 3 ITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTWSE 62
IT KVI G+Y GVTTV+LDNLAAETAA Y + HPDYA+L + NLHK+TKK +S
Sbjct: 53 ITQKVISGVYQGVTTVELDNLAAETAA-YMTVTHPDYAIL-AARIAVSNLHKQTKKQFSL 110
Query: 63 VIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERSYL 122
VI +LY+ VN + PMIS + YEI+MK+A+ LNSAI+YDRDFNYNFFGFKTLERSYL
Sbjct: 111 VISDLYHYVNPKNKKPAPMISKETYEIVMKHAEELNSAIVYDRDFNYNFFGFKTLERSYL 170
Query: 123 MKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRSPR 182
++ +G++ ERPQH+LMRVAVGIHG DI+ AIETYNL+S+KYFTHA+ + +A + P+
Sbjct: 171 LRLDGKIAERPQHLLMRVAVGIHGNDIERAIETYNLMSQKYFTHASPTLF--NAGTPQPQ 228
Query: 183 FSSFSLYGVR 192
+S L ++
Sbjct: 229 LASCFLVDMK 238
>SGD|S000000872 [details] [associations]
symbol:RNR1 "Major isoform of large subunit of
ribonucleotide-diphosphate reductase" species:4932 "Saccharomyces
cerevisiae" [GO:0000166 "nucleotide binding" evidence=IEA;IDA]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA;IMP;IDA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0003824 "catalytic
activity" evidence=IEA] InterPro:IPR000788 InterPro:IPR008926
InterPro:IPR013346 InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867
PRINTS:PR01183 PROSITE:PS00089 UniPathway:UPA00326 SGD:S000000872
Pfam:PF03477 GO:GO:0005524 GO:GO:0000166 GO:GO:0006260
EMBL:BK006939 EMBL:U18813 GO:GO:0009263 KO:K10807
InterPro:IPR005144 PROSITE:PS51161 eggNOG:COG0209 GO:GO:0005971
GO:GO:0004748 SUPFAM:SSF48168 HOGENOM:HOG000057035
TIGRFAMs:TIGR02506 GeneTree:ENSGT00390000001372 OMA:ETIYHAS
OrthoDB:EOG480N4T EMBL:X69216 EMBL:X69217 PIR:S50573
RefSeq:NP_010993.1 PDB:1ZYZ PDB:1ZZD PDB:2CVS PDB:2CVT PDB:2CVU
PDB:2CVV PDB:2CVW PDB:2CVX PDB:2CVY PDB:2EUD PDB:2ZLF PDB:2ZLG
PDB:3K8T PDB:3PAW PDB:3RSR PDB:3S87 PDB:3S8A PDB:3S8B PDB:3S8C
PDB:3TB9 PDB:3TBA PDBsum:1ZYZ PDBsum:1ZZD PDBsum:2CVS PDBsum:2CVT
PDBsum:2CVU PDBsum:2CVV PDBsum:2CVW PDBsum:2CVX PDBsum:2CVY
PDBsum:2EUD PDBsum:2ZLF PDBsum:2ZLG PDBsum:3K8T PDBsum:3PAW
PDBsum:3RSR PDBsum:3S87 PDBsum:3S8A PDBsum:3S8B PDBsum:3S8C
PDBsum:3TB9 PDBsum:3TBA ProteinModelPortal:P21524 SMR:P21524
DIP:DIP-6299N IntAct:P21524 MINT:MINT-680321 STRING:P21524
PaxDb:P21524 PeptideAtlas:P21524 PRIDE:P21524 EnsemblFungi:YER070W
GeneID:856801 KEGG:sce:YER070W CYGD:YER070w
EvolutionaryTrace:P21524 NextBio:983047 Genevestigator:P21524
GermOnline:YER070W Uniprot:P21524
Length = 888
Score = 565 (203.9 bits), Expect = 3.6e-54, P = 3.6e-54
Identities = 108/192 (56%), Positives = 145/192 (75%)
Query: 1 VEITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTW 60
V++T ++I G+Y GVTT++LDNLAAET A+ + HPDYA L + NLHK+T K +
Sbjct: 37 VKVTQRIISGVYEGVTTIELDNLAAETCAYMTTV-HPDYATL-AARIAISNLHKQTTKQF 94
Query: 61 SEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERS 120
S+V+E+LY VN TG PMISD Y I+M+N D+LNSAI+YDRDF Y++FGFKTLERS
Sbjct: 95 SKVVEDLYRYVNAATGKPAPMISDDVYNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERS 154
Query: 121 YLMKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRS 180
YL++ NG+V ERPQH++MRVA+GIHG DI+AA+ETYNL+S KYFTHA+ + +A +
Sbjct: 155 YLLRINGQVAERPQHLIMRVALGIHGRDIEAALETYNLMSLKYFTHASPTLF--NAGTPK 212
Query: 181 PRFSSFSLYGVR 192
P+ SS L ++
Sbjct: 213 PQMSSCFLVAMK 224
>CGD|CAL0001524 [details] [associations]
symbol:RNR1 species:5476 "Candida albicans" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA;NAS] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=IEA] [GO:0090329 "regulation of DNA-dependent DNA
replication" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0007090 "regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0009267 "cellular response to
starvation" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 CGD:CAL0001524 Pfam:PF03477
GO:GO:0005524 GO:GO:0071216 GO:GO:0036180 GO:GO:0006260
GO:GO:0009267 GO:GO:0036170 EMBL:AACQ01000088 EMBL:AACQ01000087
KO:K10807 InterPro:IPR005144 PROSITE:PS51161 eggNOG:COG0209
GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168 TIGRFAMs:TIGR02506
RefSeq:XP_715255.1 RefSeq:XP_715320.1 ProteinModelPortal:Q5A0N3
SMR:Q5A0N3 STRING:Q5A0N3 GeneID:3642989 GeneID:3643046
KEGG:cal:CaO19.13201 KEGG:cal:CaO19.5779 Uniprot:Q5A0N3
Length = 854
Score = 551 (199.0 bits), Expect = 9.7e-53, P = 9.7e-53
Identities = 108/192 (56%), Positives = 143/192 (74%)
Query: 1 VEITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTW 60
V IT KVI G+Y GVTT++LDNLAAE AA + HPDYAVL + NLHK+T K +
Sbjct: 37 VAITQKVISGVYQGVTTIELDNLAAEIAATMTTI-HPDYAVL-AARIAVSNLHKQTTKQY 94
Query: 61 SEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERS 120
S+V ++LY +N +TG +PMIS + Y+IIM++ D LNSAI+YDRDFNYN+FGFKTLERS
Sbjct: 95 SKVSKDLYEYINPKTGLHSPMISKETYDIIMEHEDELNSAIVYDRDFNYNYFGFKTLERS 154
Query: 121 YLMKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRS 180
YL++ NG+V ERPQH++MRVAVGIHG DI IETYNL+S+++FTH + + +A +
Sbjct: 155 YLLRINGKVAERPQHLIMRVAVGIHGNDIPRVIETYNLMSQRFFTHGSPCLF--NAGTPR 212
Query: 181 PRFSSFSLYGVR 192
P+ SS L ++
Sbjct: 213 PQMSSCFLLAMK 224
>UNIPROTKB|Q5A0N3 [details] [associations]
symbol:RNR1 "Ribonucleoside-diphosphate reductase"
species:237561 "Candida albicans SC5314" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=NAS] [GO:0009267 "cellular response
to starvation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 CGD:CAL0001524 Pfam:PF03477
GO:GO:0005524 GO:GO:0071216 GO:GO:0036180 GO:GO:0006260
GO:GO:0009267 GO:GO:0036170 EMBL:AACQ01000088 EMBL:AACQ01000087
KO:K10807 InterPro:IPR005144 PROSITE:PS51161 eggNOG:COG0209
GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168 TIGRFAMs:TIGR02506
RefSeq:XP_715255.1 RefSeq:XP_715320.1 ProteinModelPortal:Q5A0N3
SMR:Q5A0N3 STRING:Q5A0N3 GeneID:3642989 GeneID:3643046
KEGG:cal:CaO19.13201 KEGG:cal:CaO19.5779 Uniprot:Q5A0N3
Length = 854
Score = 551 (199.0 bits), Expect = 9.7e-53, P = 9.7e-53
Identities = 108/192 (56%), Positives = 143/192 (74%)
Query: 1 VEITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTW 60
V IT KVI G+Y GVTT++LDNLAAE AA + HPDYAVL + NLHK+T K +
Sbjct: 37 VAITQKVISGVYQGVTTIELDNLAAEIAATMTTI-HPDYAVL-AARIAVSNLHKQTTKQY 94
Query: 61 SEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERS 120
S+V ++LY +N +TG +PMIS + Y+IIM++ D LNSAI+YDRDFNYN+FGFKTLERS
Sbjct: 95 SKVSKDLYEYINPKTGLHSPMISKETYDIIMEHEDELNSAIVYDRDFNYNYFGFKTLERS 154
Query: 121 YLMKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRS 180
YL++ NG+V ERPQH++MRVAVGIHG DI IETYNL+S+++FTH + + +A +
Sbjct: 155 YLLRINGKVAERPQHLIMRVAVGIHGNDIPRVIETYNLMSQRFFTHGSPCLF--NAGTPR 212
Query: 181 PRFSSFSLYGVR 192
P+ SS L ++
Sbjct: 213 PQMSSCFLLAMK 224
>UNIPROTKB|Q9UW15 [details] [associations]
symbol:rnr-1 "Ribonucleoside-diphosphate reductase large
chain" species:367110 "Neurospora crassa OR74A" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 EMBL:AABX02000008 GO:GO:0009263 KO:K10807
InterPro:IPR005144 PROSITE:PS51161 eggNOG:COG0209 GO:GO:0005971
GO:GO:0004748 SUPFAM:SSF48168 HOGENOM:HOG000057035
TIGRFAMs:TIGR02506 EMBL:AF171697 EMBL:AL390092 PIR:T43711
RefSeq:XP_956818.1 UniGene:Ncr.20426 ProteinModelPortal:Q9UW15
SMR:Q9UW15 STRING:Q9UW15 EnsemblFungi:EFNCRT00000002608
GeneID:3872956 KEGG:ncr:NCU03539 OMA:ETIYHAS OrthoDB:EOG480N4T
Uniprot:Q9UW15
Length = 929
Score = 550 (198.7 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 110/192 (57%), Positives = 140/192 (72%)
Query: 1 VEITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTW 60
V IT KVI G+Y GVTT QLD+LAAETAA Y + HPDYA+L + NLHK+TKK W
Sbjct: 37 VAITQKVISGVYGGVTTAQLDDLAAETAA-YMTVTHPDYAIL-AARIAVSNLHKQTKKQW 94
Query: 61 SEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERS 120
S VI ELYN VN TG +PMI+ YE +M++ D +SAI+YDRDFNY +FGFKTLERS
Sbjct: 95 SLVISELYNYVNPRTGKHSPMIAKDVYECVMRHKDEFDSAIVYDRDFNYQYFGFKTLERS 154
Query: 121 YLMKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRS 180
YL+K +G++ ERPQHM+MRVAVGI G+D++ IETYNL+S K FTHA+ + +A +
Sbjct: 155 YLLKLDGQIAERPQHMIMRVAVGIWGDDVERVIETYNLMSLKTFTHASPTLF--NAGTPQ 212
Query: 181 PRFSSFSLYGVR 192
P+ SS L ++
Sbjct: 213 PQLSSCFLVDMK 224
>SGD|S000001328 [details] [associations]
symbol:RNR3 "Minor isoform of the large subunit of the RNR
complex" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0009263 "deoxyribonucleotide
biosynthetic process" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA;TAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA;IDA] [GO:0003824 "catalytic
activity" evidence=IEA] InterPro:IPR000788 InterPro:IPR008926
InterPro:IPR013346 InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867
PRINTS:PR01183 PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477
SGD:S000001328 GO:GO:0005739 GO:GO:0005524 GO:GO:0006260
EMBL:BK006942 EMBL:Z38060 GO:GO:0009263 RefSeq:NP_012198.3
GeneID:854744 KEGG:sce:YIL066C KO:K10807 InterPro:IPR005144
PROSITE:PS51161 eggNOG:COG0209 GO:GO:0005971 GO:GO:0004748
SUPFAM:SSF48168 HOGENOM:HOG000057035 TIGRFAMs:TIGR02506
GeneTree:ENSGT00390000001372 OrthoDB:EOG480N4T EMBL:M58012
PIR:S48413 RefSeq:NP_012204.3 ProteinModelPortal:P21672 SMR:P21672
DIP:DIP-2563N IntAct:P21672 MINT:MINT-425113 STRING:P21672
PaxDb:P21672 PeptideAtlas:P21672 PRIDE:P21672 EnsemblFungi:YIL066C
GeneID:854750 KEGG:sce:YIL060W CYGD:YIL066c OMA:RTPFICQ
NextBio:977464 Genevestigator:P21672 GermOnline:YIL066C
Uniprot:P21672
Length = 869
Score = 545 (196.9 bits), Expect = 5.1e-52, P = 5.1e-52
Identities = 104/192 (54%), Positives = 143/192 (74%)
Query: 1 VEITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTW 60
V++T ++I G+Y GVTTV+LDNLAAET A+ + HPDYA L + NLHK+T K +
Sbjct: 37 VKVTQRIISGVYSGVTTVELDNLAAETCAYMTTV-HPDYATL-AARIAISNLHKQTTKQF 94
Query: 61 SEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERS 120
S+VIE+L++ +N TG PMISD+ Y I+M+N D LNSAI+YDRDF Y +FGFKTLERS
Sbjct: 95 SKVIEDLHDWINPATGKHAPMISDEIYNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERS 154
Query: 121 YLMKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRS 180
YL++ NG V ERPQH++MRVA+GIHG DI++ ++TYNL+S +YFTHA+ + +A +
Sbjct: 155 YLLRLNGEVAERPQHLVMRVALGIHGSDIESVLKTYNLMSLRYFTHASPTLF--NAGTPH 212
Query: 181 PRFSSFSLYGVR 192
P+ SS L ++
Sbjct: 213 PQMSSCFLIAMK 224
>WB|WBGene00004391 [details] [associations]
symbol:rnr-1 species:6239 "Caenorhabditis elegans"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040017 "positive regulation of
locomotion" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000788 InterPro:IPR008926
InterPro:IPR013346 InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867
PRINTS:PR01183 PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477
GO:GO:0005524 GO:GO:0009792 GO:GO:0040007 GO:GO:0006915
GO:GO:0002119 GO:GO:0006260 GO:GO:0040011 GO:GO:0040017
GO:GO:0040035 GO:GO:0009263 KO:K10807 InterPro:IPR005144
PROSITE:PS51161 eggNOG:COG0209 GO:GO:0005971 GO:GO:0004748
SUPFAM:SSF48168 EMBL:Z19158 HOGENOM:HOG000057035 TIGRFAMs:TIGR02506
PIR:S28302 RefSeq:NP_499039.1 ProteinModelPortal:Q03604 SMR:Q03604
DIP:DIP-26889N IntAct:Q03604 MINT:MINT-1080458 STRING:Q03604
PaxDb:Q03604 PRIDE:Q03604 EnsemblMetazoa:T23G5.1.1
EnsemblMetazoa:T23G5.1.2 EnsemblMetazoa:T23G5.1.3 GeneID:176301
KEGG:cel:CELE_T23G5.1 UCSC:T23G5.1.2 CTD:176301 WormBase:T23G5.1
GeneTree:ENSGT00390000001372 InParanoid:Q03604 OMA:YKYGVKT
NextBio:891992 Uniprot:Q03604
Length = 788
Score = 530 (191.6 bits), Expect = 1.0e-50, P = 1.0e-50
Identities = 105/185 (56%), Positives = 137/185 (74%)
Query: 1 VEITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTW 60
V + +KVI GLY GVTTV+LDNLAAETAA +HP+YA+L + NLHK+T K +
Sbjct: 43 VAVAIKVISGLYKGVTTVELDNLAAETAASMTT-QHPEYALL-AARIAVSNLHKKTNKVF 100
Query: 61 SEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERS 120
SEV++ L+ + TG PMISD+ + II KNAD+LNSAI+YDRD++Y +FGFKTLERS
Sbjct: 101 SEVMKTLHEFHHPHTGKHAPMISDETWAIIEKNADKLNSAIVYDRDYSYTYFGFKTLERS 160
Query: 121 YLMKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRS 180
YL+K N +VERPQ MLMRV++GIHG+DI +AIETYNL+SE+Y THA+ + +
Sbjct: 161 YLLKINKEIVERPQQMLMRVSIGIHGDDITSAIETYNLMSERYMTHASPTLFNSGTCR-- 218
Query: 181 PRFSS 185
P+ SS
Sbjct: 219 PQMSS 223
>UNIPROTKB|Q03604 [details] [associations]
symbol:rnr-1 "Ribonucleoside-diphosphate reductase large
subunit" species:6239 "Caenorhabditis elegans" [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] InterPro:IPR000788
InterPro:IPR008926 InterPro:IPR013346 InterPro:IPR013509
Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183 PROSITE:PS00089
UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0006915 GO:GO:0002119 GO:GO:0006260
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0009263 KO:K10807
InterPro:IPR005144 PROSITE:PS51161 eggNOG:COG0209 GO:GO:0005971
GO:GO:0004748 SUPFAM:SSF48168 EMBL:Z19158 HOGENOM:HOG000057035
TIGRFAMs:TIGR02506 PIR:S28302 RefSeq:NP_499039.1
ProteinModelPortal:Q03604 SMR:Q03604 DIP:DIP-26889N IntAct:Q03604
MINT:MINT-1080458 STRING:Q03604 PaxDb:Q03604 PRIDE:Q03604
EnsemblMetazoa:T23G5.1.1 EnsemblMetazoa:T23G5.1.2
EnsemblMetazoa:T23G5.1.3 GeneID:176301 KEGG:cel:CELE_T23G5.1
UCSC:T23G5.1.2 CTD:176301 WormBase:T23G5.1
GeneTree:ENSGT00390000001372 InParanoid:Q03604 OMA:YKYGVKT
NextBio:891992 Uniprot:Q03604
Length = 788
Score = 530 (191.6 bits), Expect = 1.0e-50, P = 1.0e-50
Identities = 105/185 (56%), Positives = 137/185 (74%)
Query: 1 VEITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTW 60
V + +KVI GLY GVTTV+LDNLAAETAA +HP+YA+L + NLHK+T K +
Sbjct: 43 VAVAIKVISGLYKGVTTVELDNLAAETAASMTT-QHPEYALL-AARIAVSNLHKKTNKVF 100
Query: 61 SEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERS 120
SEV++ L+ + TG PMISD+ + II KNAD+LNSAI+YDRD++Y +FGFKTLERS
Sbjct: 101 SEVMKTLHEFHHPHTGKHAPMISDETWAIIEKNADKLNSAIVYDRDYSYTYFGFKTLERS 160
Query: 121 YLMKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRS 180
YL+K N +VERPQ MLMRV++GIHG+DI +AIETYNL+SE+Y THA+ + +
Sbjct: 161 YLLKINKEIVERPQQMLMRVSIGIHGDDITSAIETYNLMSERYMTHASPTLFNSGTCR-- 218
Query: 181 PRFSS 185
P+ SS
Sbjct: 219 PQMSS 223
>TAIR|locus:2052469 [details] [associations]
symbol:RNR1 "ribonucleotide reductase 1" species:3702
"Arabidopsis thaliana" [GO:0004748 "ribonucleoside-diphosphate
reductase activity, thioredoxin disulfide as acceptor"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA;ISS]
[GO:0006260 "DNA replication" evidence=IEA;ISS;IMP] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0046686 "response
to cadmium ion" evidence=IEP] [GO:0009202 "deoxyribonucleoside
triphosphate biosynthetic process" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] [GO:0007010 "cytoskeleton organization"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] InterPro:IPR000788 InterPro:IPR008926
InterPro:IPR013346 InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867
PRINTS:PR01183 PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477
GO:GO:0005524 GO:GO:0046686 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006260 EMBL:AC007019 GO:GO:0009263 KO:K10807
InterPro:IPR005144 PROSITE:PS51161 eggNOG:COG0209 GO:GO:0005971
GO:GO:0004748 SUPFAM:SSF48168 GO:GO:0009202 EMBL:AF092841
EMBL:AY035080 EMBL:BT008573 IPI:IPI00525243 PIR:B84605 PIR:T51813
RefSeq:NP_179770.1 UniGene:At.115 ProteinModelPortal:Q9SJ20
SMR:Q9SJ20 STRING:Q9SJ20 PaxDb:Q9SJ20 PRIDE:Q9SJ20
EnsemblPlants:AT2G21790.1 GeneID:816715 KEGG:ath:AT2G21790
GeneFarm:2079 TAIR:At2g21790 HOGENOM:HOG000057035 InParanoid:Q9SJ20
OMA:PQARNSN PhylomeDB:Q9SJ20 ProtClustDB:PLN02437
Genevestigator:Q9SJ20 GermOnline:AT2G21790 TIGRFAMs:TIGR02506
Uniprot:Q9SJ20
Length = 816
Score = 511 (184.9 bits), Expect = 1.9e-48, P = 1.9e-48
Identities = 104/185 (56%), Positives = 137/185 (74%)
Query: 1 VEITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTW 60
V + KV G+Y GVTT QLD LAAETAA HPDYA L + NLHK TKK++
Sbjct: 37 VLVAQKVCAGVYKGVTTSQLDELAAETAAAMT-CNHPDYASL-AARIAVSNLHKNTKKSF 94
Query: 61 SEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERS 120
SE I++++ VN +G ++P+I+D +EIIM+NA RL+S IIYDRDF Y++FGFKTLERS
Sbjct: 95 SETIKDMFYHVNDRSGLKSPLIADDVFEIIMQNAARLDSEIIYDRDFEYDYFGFKTLERS 154
Query: 121 YLMKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRS 180
YL+K G VVERPQHMLMRVAVGIH +DID+ I+TY+L+S+++FTHA+ + +A +
Sbjct: 155 YLLKVQGTVVERPQHMLMRVAVGIHKDDIDSVIQTYHLMSQRWFTHASPTLF--NAGTPR 212
Query: 181 PRFSS 185
P+ SS
Sbjct: 213 PQLSS 217
>DICTYBASE|DDB_G0284071 [details] [associations]
symbol:rnrA "ribonucleoside-diphosphate reductase"
species:44689 "Dictyostelium discoideum" [GO:0005515 "protein
binding" evidence=IPI] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA;ISS]
[GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=IEA;ISS] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
UniPathway:UPA00326 dictyBase:DDB_G0284071 Pfam:PF03477
GO:GO:0005524 GenomeReviews:CM000153_GR GO:GO:0006260
EMBL:AAFI02000063 GO:GO:0009263 KO:K10807 InterPro:IPR005144
PROSITE:PS51161 eggNOG:COG0209 GO:GO:0005971 GO:GO:0004748
SUPFAM:SSF48168 TIGRFAMs:TIGR02506 OMA:YKYGVKT RefSeq:XP_638726.1
HSSP:P21524 ProteinModelPortal:Q54Q71 SMR:Q54Q71 STRING:Q54Q71
EnsemblProtists:DDB0230075 GeneID:8624396 KEGG:ddi:DDB_G0284071
ProtClustDB:CLSZ2429164 GO:GO:0009186 Uniprot:Q54Q71
Length = 870
Score = 511 (184.9 bits), Expect = 2.8e-48, P = 2.8e-48
Identities = 97/185 (52%), Positives = 135/185 (72%)
Query: 1 VEITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTW 60
+E+ KV+ G++PGV T +LDNLAAETAA Y +HPDY +L + NLHK+T K++
Sbjct: 55 IEVAQKVVSGVFPGVKTTELDNLAAETAA-YMSTRHPDYGIL-AARISVSNLHKQTSKSF 112
Query: 61 SEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERS 120
E +++ Y +N ++ P++S + YEI+MK+ +RL S I Y RDF+Y+FFGFKTLERS
Sbjct: 113 VETVKKQYEFINPKSNLLAPLVSKELYEIVMKHGERLESVIDYYRDFDYDFFGFKTLERS 172
Query: 121 YLMKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRS 180
YL + NG++VERPQHMLMRV++GIHGED+++AI TY LSEK FTHA + +A + S
Sbjct: 173 YLHRINGKIVERPQHMLMRVSIGIHGEDLESAINTYKRLSEKLFTHATPTLF--NAGTPS 230
Query: 181 PRFSS 185
P+ SS
Sbjct: 231 PQMSS 235
>UNIPROTKB|P50648 [details] [associations]
symbol:RNR1 "Ribonucleoside-diphosphate reductase large
subunit" species:57267 "Plasmodium falciparum Dd2" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 GO:GO:0009263 InterPro:IPR005144 PROSITE:PS51161
eggNOG:COG0209 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
TIGRFAMs:TIGR02506 EMBL:U01323 ProteinModelPortal:P50648 SMR:P50648
Uniprot:P50648
Length = 806
Score = 436 (158.5 bits), Expect = 3.0e-40, P = 3.0e-40
Identities = 88/190 (46%), Positives = 125/190 (65%)
Query: 3 ITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTWSE 62
+T VI G+Y G+ T +LD LAA+T A Y HPD+++L + NLHK T +E
Sbjct: 38 VTQGVINGMYSGIKTCELDELAAQTCA-YMATTHPDFSIL-AARITTDNLHKNTSDDVAE 95
Query: 63 VIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERSYL 122
V E LY + G +IS + Y+ I+ + DRLN I Y RDFNY++FGFKTLERSYL
Sbjct: 96 VAEALYTYKDVR-GRPASLISKEVYDFILLHKDRLNKEIDYTRDFNYDYFGFKTLERSYL 154
Query: 123 MKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRSPR 182
++ N +++ERPQH+LMRV++GIH +DID A+ETY+L+S+KYFTHA + + + P+
Sbjct: 155 LRINNKIIERPQHLLMRVSIGIHIDDIDKALETYHLMSQKYFTHATPTLFNSG--TPRPQ 212
Query: 183 FSSFSLYGVR 192
SS L ++
Sbjct: 213 MSSCFLLSMK 222
>UNIPROTKB|O61065 [details] [associations]
symbol:RNR1 "Ribonucleoside-diphosphate reductase large
chain" species:5807 "Cryptosporidium parvum" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 GO:GO:0009263 InterPro:IPR005144 PROSITE:PS51161
eggNOG:COG0209 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
TIGRFAMs:TIGR02506 EMBL:AF043243 ProteinModelPortal:O61065
SMR:O61065 STRING:O61065 Uniprot:O61065
Length = 803
Score = 416 (151.5 bits), Expect = 4.4e-38, P = 4.4e-38
Identities = 86/183 (46%), Positives = 119/183 (65%)
Query: 3 ITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTWSE 62
+T VI GLY G+ T +LD LA++T A Y H D++ L + NLHK T +
Sbjct: 38 VTQAVINGLYSGIKTSELDELASQTCA-YMAATHNDFSKL-AARISTSNLHKNTSSDIGD 95
Query: 63 VIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERSYL 122
V +LYN + + G P+IS Y+ IM+N +R+NS I + +DF Y++F FKTLERSYL
Sbjct: 96 VASQLYNFKDNQ-GCPAPLISKPVYDFIMENRERINSKIDFSKDFEYDYFAFKTLERSYL 154
Query: 123 MKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRSPR 182
+K + +VVERPQH+LMRV+ GIH DI+AA+ETY LLS+KYFTHA + + + P+
Sbjct: 155 LKIDNKVVERPQHLLMRVSCGIHCGDIEAALETYELLSQKYFTHATPTLFNSG--TPRPQ 212
Query: 183 FSS 185
SS
Sbjct: 213 MSS 215
>UNIPROTKB|E9PD78 [details] [associations]
symbol:RRM1 "Ribonucleoside-diphosphate reductase"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IEA]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 GO:GO:0005524 GO:GO:0006260
GO:GO:0051290 GO:GO:0009263 GO:GO:0005971 GO:GO:0004748
SUPFAM:SSF48168 TIGRFAMs:TIGR02506 HGNC:HGNC:10451 ChiTaRS:RRM1
EMBL:AC015689 IPI:IPI00943207 ProteinModelPortal:E9PD78 SMR:E9PD78
Ensembl:ENST00000423050 ArrayExpress:E9PD78 Bgee:E9PD78
Uniprot:E9PD78
Length = 695
Score = 413 (150.4 bits), Expect = 5.1e-38, P = 5.1e-38
Identities = 78/129 (60%), Positives = 101/129 (78%)
Query: 64 IEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERSYLM 123
+E+LYN +N G +PM++ +I++ N DRLNSAIIYDRDF+YN+FGFKTLERSYL+
Sbjct: 1 MEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLL 60
Query: 124 KNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRSPRF 183
K NG+V ERPQHMLMRV+VGIH EDIDAAIETYNLLSE++FTHA+ + +A + P+
Sbjct: 61 KINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLF--NAGTNRPQL 118
Query: 184 SSFSLYGVR 192
SS L ++
Sbjct: 119 SSCFLLSMK 127
>UNIPROTKB|P50647 [details] [associations]
symbol:RNR1 "Ribonucleoside-diphosphate reductase large
subunit" species:5838 "Plasmodium falciparum FCR-3/Gambia"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 GO:GO:0009263 InterPro:IPR005144 PROSITE:PS51161
GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168 TIGRFAMs:TIGR02506
EMBL:AF205580 PIR:B48687 ProteinModelPortal:P50647 SMR:P50647
Uniprot:P50647
Length = 804
Score = 408 (148.7 bits), Expect = 3.2e-37, P = 3.2e-37
Identities = 84/190 (44%), Positives = 121/190 (63%)
Query: 3 ITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTWSE 62
+T VI G+Y + T +LD LAA+T A Y HPD+++L + NLHK T +E
Sbjct: 39 VTQGVINGMYSSIKTCELDELAAQTCA-YMATTHPDFSIL-AARITTDNLHKNTSDDVAE 96
Query: 63 VIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERSYL 122
V E LY + G +IS + Y+ I+ + RLN I Y FNY++FGFKTLERSYL
Sbjct: 97 VAEALYTYKDGR-GRPASLISKEVYDFILLHKVRLNKEIDYTTHFNYDYFGFKTLERSYL 155
Query: 123 MKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRSPR 182
++ N +++ERPQH+LMRV++GIH +DID A+ETY+L+S+KYFTHA + + + P+
Sbjct: 156 LRINNKIIERPQHLLMRVSIGIHIDDIDKALETYHLMSQKYFTHATPTLFNSG--TPRPQ 213
Query: 183 FSSFSLYGVR 192
SS L ++
Sbjct: 214 MSSCFLLSMK 223
>UNIPROTKB|O15909 [details] [associations]
symbol:RNR1 "Ribonucleoside-diphosphate reductase large
subunit" species:5702 "Trypanosoma brucei brucei" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 GO:GO:0009263 InterPro:IPR005144 PROSITE:PS51161
GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168 TIGRFAMs:TIGR02506
EMBL:U80910 ProteinModelPortal:O15909 SMR:O15909
EuPathDB:TriTrypDB:Tb11.02.5720 EuPathDB:TriTrypDB:Tb427tmp.02.5720
Uniprot:O15909
Length = 838
Score = 350 (128.3 bits), Expect = 6.5e-31, P = 6.5e-31
Identities = 81/198 (40%), Positives = 124/198 (62%)
Query: 1 VEITLKVI-KGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKT 59
V+ ++V+ +G+ G++T LD L AETAA Y KHPDY +L L LHK T ++
Sbjct: 41 VDDLVRVVGEGVREGMSTSMLDELLAETAA-YCVTKHPDYGLL-AGRLAVTALHKTTTES 98
Query: 60 WSEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLER 119
+ L+ V++ T P+IS++ ++I K++ L I Y+RDF++ +FG+KTLER
Sbjct: 99 VLDSFRVLHEHVSQATKRHAPLISEELWDIANKHSAALQQIINYERDFDFEYFGYKTLER 158
Query: 120 SYLMK-NNGR----VVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRT 174
SYL++ + GR VVERPQ M +RVA+GIHGED++ ETY+ +S+ +FTHA +
Sbjct: 159 SYLLRVHKGRGVMEVVERPQQMFLRVALGIHGEDLERVKETYDYMSQGFFTHATPTLF-- 216
Query: 175 HAMSRSPRFSSFSLYGVR 192
+A + P+ SS L +R
Sbjct: 217 NAGTPFPQMSSCFLVAMR 234
>CGD|CAL0002354 [details] [associations]
symbol:RNR3 species:5476 "Candida albicans" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=NAS] InterPro:IPR000788
InterPro:IPR008926 InterPro:IPR013346 InterPro:IPR013509
Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183 PROSITE:PS00089
UniPathway:UPA00326 CGD:CAL0002354 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 KO:K10807 InterPro:IPR005144 PROSITE:PS51161
eggNOG:COG0209 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
TIGRFAMs:TIGR02506 EMBL:AACQ01000235 EMBL:AACQ01000236
RefSeq:XP_710800.1 RefSeq:XP_710811.1 ProteinModelPortal:Q59M54
SMR:Q59M54 STRING:Q59M54 GeneID:3647580 GeneID:3647591
KEGG:cal:CaO19.13267 KEGG:cal:CaO19.5845 Uniprot:Q59M54
Length = 816
Score = 294 (108.6 bits), Expect = 6.5e-25, P = 6.5e-25
Identities = 65/170 (38%), Positives = 101/170 (59%)
Query: 2 EITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTWS 61
+I V +GL +T +L AE A + HPDYA+L + L+ + ++S
Sbjct: 37 QIVESVQRGLPSSLTIEELYTFIAEVIAS-RVIYHPDYAIL-AGRIETRKLYLKVPYSFS 94
Query: 62 EVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERSY 121
E +E L +++ + +P IS Y+++ K+ + L+ I RD+N +FG KTLE SY
Sbjct: 95 ENVERLRKYRPRKSNSYSP-ISSAFYKVVKKHGEFLDKVIDKTRDYNLTYFGIKTLESSY 153
Query: 122 LMKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVM 171
L+K +G V E PQ++ MRVA+GIH DI+A ETY+L+S+KYF HA+ +
Sbjct: 154 LLKIDGEVAELPQYLFMRVAIGIHQNDINAIAETYDLMSQKYFIHASPTL 203
>UNIPROTKB|Q59M54 [details] [associations]
symbol:RNR3 "Ribonucleoside-diphosphate reductase"
species:237561 "Candida albicans SC5314" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=NAS] InterPro:IPR000788
InterPro:IPR008926 InterPro:IPR013346 InterPro:IPR013509
Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183 PROSITE:PS00089
UniPathway:UPA00326 CGD:CAL0002354 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 KO:K10807 InterPro:IPR005144 PROSITE:PS51161
eggNOG:COG0209 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
TIGRFAMs:TIGR02506 EMBL:AACQ01000235 EMBL:AACQ01000236
RefSeq:XP_710800.1 RefSeq:XP_710811.1 ProteinModelPortal:Q59M54
SMR:Q59M54 STRING:Q59M54 GeneID:3647580 GeneID:3647591
KEGG:cal:CaO19.13267 KEGG:cal:CaO19.5845 Uniprot:Q59M54
Length = 816
Score = 294 (108.6 bits), Expect = 6.5e-25, P = 6.5e-25
Identities = 65/170 (38%), Positives = 101/170 (59%)
Query: 2 EITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTWS 61
+I V +GL +T +L AE A + HPDYA+L + L+ + ++S
Sbjct: 37 QIVESVQRGLPSSLTIEELYTFIAEVIAS-RVIYHPDYAIL-AGRIETRKLYLKVPYSFS 94
Query: 62 EVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERSY 121
E +E L +++ + +P IS Y+++ K+ + L+ I RD+N +FG KTLE SY
Sbjct: 95 ENVERLRKYRPRKSNSYSP-ISSAFYKVVKKHGEFLDKVIDKTRDYNLTYFGIKTLESSY 153
Query: 122 LMKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVM 171
L+K +G V E PQ++ MRVA+GIH DI+A ETY+L+S+KYF HA+ +
Sbjct: 154 LLKIDGEVAELPQYLFMRVAIGIHQNDINAIAETYDLMSQKYFIHASPTL 203
>UNIPROTKB|F1SUZ5 [details] [associations]
symbol:F1SUZ5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006260 "DNA replication" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=IEA] InterPro:IPR000788
InterPro:IPR008926 InterPro:IPR013346 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 Pfam:PF03477 GO:GO:0006260 InterPro:IPR005144
PROSITE:PS51161 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
TIGRFAMs:TIGR02506 GeneTree:ENSGT00390000001372 EMBL:CU467106
EMBL:CU466349 Ensembl:ENSSSCT00000016142 OMA:XRPGAFA Uniprot:F1SUZ5
Length = 789
Score = 274 (101.5 bits), Expect = 8.5e-23, P = 8.5e-23
Identities = 58/132 (43%), Positives = 81/132 (61%)
Query: 2 EITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTWS 61
+IT+KVI+GLY GVTTV+LD LAAETAA KHPDYA+L + NLHKETKK +S
Sbjct: 38 QITMKVIQGLYSGVTTVELDTLAAETAATLTT-KHPDYAIL-AARIAVSNLHKETKKVFS 95
Query: 62 EVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERSY 121
+V+E+L+N +N G +PM++ +I++ N D++ II F F R+Y
Sbjct: 96 DVMEDLFNYINPHNGKHSPMVARSTLDIVLANKDKIQCFIILKCIFPELFCNTHVCVRAY 155
Query: 122 LMKNNGRVVERP 133
+ G +RP
Sbjct: 156 IYFQGGNKTDRP 167
>UNIPROTKB|Q8SR37 [details] [associations]
symbol:ECU10_0920 "Ribonucleoside-diphosphate reductase
large chain" species:284813 "Encephalitozoon cuniculi GB-M1"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 GO:GO:0005524 GO:GO:0006260
GO:GO:0009263 KO:K10807 eggNOG:COG0209 GO:GO:0005971 GO:GO:0004748
SUPFAM:SSF48168 HOGENOM:HOG000057035 TIGRFAMs:TIGR02506 OMA:YKYGVKT
EMBL:AL590449 RefSeq:NP_586207.1 ProteinModelPortal:Q8SR37
SMR:Q8SR37 STRING:Q8SR37 PRIDE:Q8SR37 GeneID:859856
GenomeReviews:AL590449_GR KEGG:ecu:ECU10_0920 Uniprot:Q8SR37
Length = 768
Score = 251 (93.4 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 60/184 (32%), Positives = 103/184 (55%)
Query: 2 EITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKETKKTWS 61
E+ +++ G +T + + +ETAA KHP+Y + ++ +H+ T ++
Sbjct: 40 ELVERIVSGWCEDMTRKETIDYCSETAASMIT-KHPEYGQI-SSRIIVSYIHEITMDSFV 97
Query: 62 EVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKTLERSY 121
E I+ Y + K G M+S++ Y II+++ + + I Y+ DF +++FG TL +SY
Sbjct: 98 EKIK--Y--IQKHRG----MVSEEMYGIILEHGETIEGMINYENDFLFSYFGILTLMKSY 149
Query: 122 LMKNNGRVVERPQHMLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRSP 181
L+K ++ERPQ M MRVA+ IH D + E YNLLS YFTHA + ++ ++P
Sbjct: 150 LIKVGEEIIERPQDMFMRVALQIHKTDFEKVREVYNLLSGHYFTHATPTLY--NSCLKNP 207
Query: 182 RFSS 185
+ +S
Sbjct: 208 QLAS 211
>UNIPROTKB|I3LEK6 [details] [associations]
symbol:I3LEK6 "Ribonucleoside-diphosphate reductase"
species:9823 "Sus scrofa" [GO:0006260 "DNA replication"
evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IEA]
[GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013509
Pfam:PF00317 Pfam:PF02867 UniPathway:UPA00326 GO:GO:0005524
GO:GO:0006260 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
GeneTree:ENSGT00390000001372 EMBL:CU466349
Ensembl:ENSSSCT00000032470 Uniprot:I3LEK6
Length = 135
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 34/57 (59%), Positives = 43/57 (75%)
Query: 136 MLMRVAVGIHGEDIDAAIETYNLLSEKYFTHAADVMLRTHAMSRSPRFSSFSLYGVR 192
MLMRV+VGIH EDIDAAIETYNLLSEK+FTHA+ + +A + P+ SS L ++
Sbjct: 1 MLMRVSVGIHKEDIDAAIETYNLLSEKWFTHASPTLF--NAGTNRPQLSSCFLLSMK 55
>UNIPROTKB|Q48FF6 [details] [associations]
symbol:nrdA "Ribonucleoside-diphosphate reductase"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 EMBL:CP000058 GenomeReviews:CP000058_GR
InterPro:IPR005144 PROSITE:PS51161 GO:GO:0009265 eggNOG:COG0209
KO:K00525 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168 OMA:PQARNSN
TIGRFAMs:TIGR02506 RefSeq:YP_275880.1 STRING:Q48FF6 GeneID:3557025
KEGG:psp:PSPPH_3738 PATRIC:19976913 HOGENOM:HOG000057036
ProtClustDB:PRK07207 Uniprot:Q48FF6
Length = 970
Score = 122 (48.0 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 53/196 (27%), Positives = 86/196 (43%)
Query: 3 ITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKE----TKK 58
I + +K LY GV ++ TA + P+Y+ + LL L E
Sbjct: 183 IQTETLKNLYDGVALKDVNTALVMTARTLVE-REPNYSFV-TARLLMDTLRAEGLGFLGV 240
Query: 59 TWSEVIEELYNMVNKE------TGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFF 112
S E+ ++ K TG + +++ E + ++L AI ++RD + +
Sbjct: 241 ADSATHHEMADLYAKALPAYVATGIKFELLNPVLAEF---DLEKLGKAINHERDQQFTYL 297
Query: 113 GFKTLERSYLMKNNGRVVERPQHMLMRVAVGIHGEDI---DAAIETYNLLSEKYFTHAAD 169
G +TL Y + +G E PQ MRVA+G+ E+ D AIE YNLLS F + +
Sbjct: 298 GLQTLYDRYFIHKDGVRFELPQIFFMRVAMGLAIEEKAREDRAIEFYNLLSS--FDYMSS 355
Query: 170 VMLRTHAMSRSPRFSS 185
+A + P+ SS
Sbjct: 356 TPTLFNAGTLRPQLSS 371
>UNIPROTKB|Q886B0 [details] [associations]
symbol:nrdA "Ribonucleoside-diphosphate reductase"
species:223283 "Pseudomonas syringae pv. tomato str. DC3000"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 EMBL:AE016853 GenomeReviews:AE016853_GR
InterPro:IPR005144 PROSITE:PS51161 GO:GO:0009265 eggNOG:COG0209
KO:K00525 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168 OMA:PQARNSN
TIGRFAMs:TIGR02506 HOGENOM:HOG000057036 ProtClustDB:PRK07207
RefSeq:NP_791496.1 ProteinModelPortal:Q886B0 GeneID:1183308
KEGG:pst:PSPTO_1671 PATRIC:19994588
BioCyc:PSYR223283:GJIX-1701-MONOMER Uniprot:Q886B0
Length = 970
Score = 122 (48.0 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 53/196 (27%), Positives = 86/196 (43%)
Query: 3 ITLKVIKGLYPGVTTVQLDNLAAETAAFYEPLKHPDYAVLWLPELLCPNLHKE----TKK 58
I + +K LY GV ++ TA + P+Y+ + LL L E
Sbjct: 183 IQTETLKNLYDGVALKDVNTALVMTARTLVE-REPNYSFV-TARLLMDTLRAEGLGFLGV 240
Query: 59 TWSEVIEELYNMVNKE------TGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFF 112
S E+ ++ K TG + +++ E + ++L AI ++RD + +
Sbjct: 241 ADSATHHEMADLYAKALPAYVATGIKFELLNPVLAEF---DLEKLGKAINHERDQQFTYL 297
Query: 113 GFKTLERSYLMKNNGRVVERPQHMLMRVAVGIHGEDI---DAAIETYNLLSEKYFTHAAD 169
G +TL Y + +G E PQ MRVA+G+ E+ D AIE YNLLS F + +
Sbjct: 298 GLQTLYDRYFIHKDGVRFELPQIFFMRVAMGLAIEEKAREDRAIEFYNLLSS--FDYMSS 355
Query: 170 VMLRTHAMSRSPRFSS 185
+A + P+ SS
Sbjct: 356 TPTLFNAGTLRPQLSS 371
>UNIPROTKB|Q607W9 [details] [associations]
symbol:nrdA "Ribonucleoside-diphosphate reductase"
species:243233 "Methylococcus capsulatus str. Bath" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR005144 PROSITE:PS51161 GO:GO:0009265 KO:K00525
GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168 OMA:PQARNSN
TIGRFAMs:TIGR02506 HOGENOM:HOG000057036 ProtClustDB:PRK07207
RefSeq:YP_114078.1 ProteinModelPortal:Q607W9 GeneID:3104511
KEGG:mca:MCA1634 PATRIC:22607102 Uniprot:Q607W9
Length = 969
Score = 116 (45.9 bits), Expect = 0.00032, P = 0.00032
Identities = 32/101 (31%), Positives = 52/101 (51%)
Query: 88 EIIMKNADRLNSAIIYDRDFNYNFFGFKTLERSYLMKNNGRVVERPQHMLMRVAVGIHGE 147
E+ + RL A+ +RD +N+ G +TL Y + + E PQ MRVA+G+ +
Sbjct: 274 ELARFDLQRLGEALKPERDLQFNYLGLQTLYDRYFIHSGDIRFELPQAFFMRVAMGLAIQ 333
Query: 148 DIDA---AIETYNLLSEKYFTHAADVMLRTHAMSRSPRFSS 185
++D AIE Y+LLS F + + +A + P+ SS
Sbjct: 334 EVDREERAIEFYDLLSSFDFMSSTPTLF--NAGTLRPQLSS 372
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 193 193 0.00098 110 3 11 22 0.43 32
31 0.43 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 597 (63 KB)
Total size of DFA: 168 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.14u 0.13s 19.27t Elapsed: 00:00:01
Total cpu time: 19.15u 0.13s 19.28t Elapsed: 00:00:01
Start: Thu Aug 15 13:05:55 2013 End: Thu Aug 15 13:05:56 2013