BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15808
(275 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242015304|ref|XP_002428304.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512889|gb|EEB15566.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 287
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 97/212 (45%), Positives = 147/212 (69%), Gaps = 1/212 (0%)
Query: 9 ELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRD 68
ELG++LL ++L G IPP TL IL QTLLY M ++ PW+ +CIS ++I+N +D
Sbjct: 11 ELGLILLFNELLIFGMKNIPPVTLGAILGQTLLY-MGIINVPWEKEEVCISGNSIINDKD 69
Query: 69 YKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
+KRL LSA+EHGDDMHLY+NM S ++KGR LE +GS F ++++FL I TS+ YV+L++
Sbjct: 70 WKRLFLSAVEHGDDMHLYFNMASFLIKGRSLEARYGSKNFAIILTFLTIVTSLMYVILAF 129
Query: 129 VIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIH 188
++ + + + CAIGFS V+F++K + T + P + LL +P YA W+EL+IIH
Sbjct: 130 IMSNVMEATSYMDSCAIGFSGVIFALKVLTTHEEPYIRAMLLGVDIPGKYAAWVELIIIH 189
Query: 189 LMVPNASFKGHLSGILVGLCYTETSLGRLVER 220
++VPN+SF GH +GIL G+ Y ++ +G ++
Sbjct: 190 MLVPNSSFMGHFAGILSGVIYCKSFIGLFLDN 221
>gi|242006593|ref|XP_002424134.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212507451|gb|EEB11396.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 236
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 141/216 (65%), Gaps = 8/216 (3%)
Query: 23 GFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDD 82
G IPP TL I+ QTLLY M + PWD +C+S + IL +D+KRL LSALEHGDD
Sbjct: 25 GMKNIPPITLGSIVGQTLLY-MGFINVPWDKEDVCLSGNGILKLKDWKRLFLSALEHGDD 83
Query: 83 MHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQ 142
MHLYYNM S ++KGR LE+ +GS F +++ FL I TS YV+L+ + + + + +
Sbjct: 84 MHLYYNMASFLIKGRSLEKRYGSKCFAIILIFLTILTSGIYVLLAQAMSEVFENDSYMKS 143
Query: 143 CAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSG 202
CAIGFS V+F++K + T + P + L+ +P YA WIEL++IHL+VPN+SF GHL+G
Sbjct: 144 CAIGFSGVIFALKVLTTHEEPSLRATLVGVQIPGKYAAWIELILIHLLVPNSSFMGHLAG 203
Query: 203 ILVGLCYTETSLGRLVERSGRSVSRVVNTLTNVFKL 238
IL G+ Y T G ++++S ++ LT FK+
Sbjct: 204 ILAGVIYCNTIFGNVLDKS-------ISFLTGNFKV 232
>gi|321459244|gb|EFX70299.1| hypothetical protein DAPPUDRAFT_300486 [Daphnia pulex]
Length = 312
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 136/214 (63%), Gaps = 1/214 (0%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
MAR+ E+G+LLL++Q+L+ G PP T+ ++ Q L+ M ++ WD+ G+C+SA
Sbjct: 1 MARQRRGIEMGVLLLMWQLLNTGLETFPPVTILVVAGQVCLF-MGLIPVSWDAGGVCLSA 59
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
+L R+Y+RLVLSALEH DD+HLYYNM+S + KGR LER FGS F L+S + TS
Sbjct: 60 QAVLKWREYERLVLSALEHADDLHLYYNMLSFLSKGRSLERHFGSPYFAYLLSVFTVLTS 119
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V YV L ++ + HD CAIGFS V+F++K + T + V YA
Sbjct: 120 VTYVGLEVLLSELLHDKQHYKTCAIGFSGVIFALKVLTTSYWESGYRRYFGIRVSGKYAV 179
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSL 214
W+EL+ I LMVPN SF GHL+GILVG+ YT+ L
Sbjct: 180 WVELIAIQLMVPNTSFVGHLAGILVGVAYTQGPL 213
>gi|383847955|ref|XP_003699618.1| PREDICTED: rhomboid domain-containing protein 1-like [Megachile
rotundata]
Length = 247
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/219 (45%), Positives = 136/219 (62%), Gaps = 1/219 (0%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
+ RR + GI LL Q ++ G IPP TLT I++Q LLYI ++ PW++ +CIS
Sbjct: 4 IQRRQQGLQYGIYLLCLQAINFGIDKIPPATLTSIILQVLLYI-GLIKVPWNAEEVCIST 62
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
I RD+K ++S EHG DMHLYYNMVSLI+KG LE M+G++ FV+L++ L S
Sbjct: 63 IKIFKYRDWKSFIISNFEHGSDMHLYYNMVSLILKGSYLEPMYGTMNFVILLAVLSFGCS 122
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
Y L Y + + D QCAIGFSAVLF++K I + D H + VP+ A
Sbjct: 123 AMYTSLGYALMQLTGDYGYYTQCAIGFSAVLFALKVIVVCEEQDRIHDVGGLRVPSKIAV 182
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W+EL++IHL+VP +SF GHL GILVG Y T +G +++
Sbjct: 183 WVELILIHLLVPQSSFVGHLGGILVGCLYCYTFVGEMID 221
>gi|322802448|gb|EFZ22798.1| hypothetical protein SINV_10941 [Solenopsis invicta]
Length = 247
Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 97/217 (44%), Positives = 135/217 (62%), Gaps = 1/217 (0%)
Query: 3 RRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHT 62
RR E GI +L QVL+ G IPP TL ++ QTLLY ++ PW++ +CISA
Sbjct: 6 RRQQGLETGIFMLCMQVLNFGLDKIPPATLIGVIAQTLLY-AGLIRVPWNAEEVCISAVK 64
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
I+ +D++ LS EHG DMHLYYNM+S I+KG LE ++G+ FV+L++ L SV
Sbjct: 65 IIKYKDWRSFFLSNFEHGSDMHLYYNMISFILKGSYLEPLYGTTNFVLLLAILSFGCSVM 124
Query: 123 YVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWI 182
YV L Y++ + D CAIGFSA LF++K + + D H + F VP+ A W
Sbjct: 125 YVSLGYILMQLTGDYGYFTACAIGFSATLFALKVVALCEERDKLHNISGFIVPSKLAVWF 184
Query: 183 ELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
EL++IHL+VPN+SF GHL GILVG Y+ T +G ++
Sbjct: 185 ELILIHLLVPNSSFIGHLGGILVGCLYSYTFIGETLD 221
>gi|380024431|ref|XP_003695999.1| PREDICTED: rhomboid domain-containing protein 1-like [Apis florea]
Length = 247
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/217 (44%), Positives = 132/217 (60%), Gaps = 1/217 (0%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
+ RR + GI LL Q L+ G IPP TL I+ Q LLYI + PW++ +CISA
Sbjct: 4 IQRRQHGLQYGIYLLYIQALNFGIDKIPPATLLTIIAQVLLYI-GFIKVPWNAEEVCISA 62
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
I D+ ++S EHG DMHLYYNMVSLI+KG LE M+ ++ F++L++ L S
Sbjct: 63 IKIFKYHDWNSFIISNFEHGSDMHLYYNMVSLILKGSYLEPMYKTMNFIILLTILSFGCS 122
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
Y+ LSYV+ + D QCAIGFSA+LF++K I + D H + VP+ A
Sbjct: 123 TMYIGLSYVLMQLTGDYGYYVQCAIGFSAILFALKVIVICEEYDKIHDIGGLRVPSKIAV 182
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRL 217
W+EL++IHL+VP +SF GHL GIL+G Y T +G +
Sbjct: 183 WVELILIHLLVPQSSFIGHLGGILIGCLYCYTFIGEM 219
>gi|340725934|ref|XP_003401319.1| PREDICTED: rhomboid domain-containing protein 1-like [Bombus
terrestris]
Length = 247
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 96/219 (43%), Positives = 133/219 (60%), Gaps = 1/219 (0%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
+ RR + GI LL Q L+ G IPP TL I+ Q LLY+ ++ PW++ +CISA
Sbjct: 4 IQRRQQGLQYGIYLLCMQALNYGIDKIPPATLITIIAQVLLYV-GLIKVPWNAEEVCISA 62
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
+ RD+ ++S EHG DMHLYYNMVSLI+KG LE M+G++ FV+L++ L S
Sbjct: 63 IKVFKYRDWNSFLISNFEHGSDMHLYYNMVSLILKGSYLEPMYGTINFVILLAILSFGCS 122
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
Y L Y + + D QCAIGFSA+LF++K I + D + F V + A
Sbjct: 123 TMYAGLGYALMQLTGDYGYYTQCAIGFSAILFALKVIVVCEEYDRIQDVGGFRVSSKIAV 182
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W+EL++IHL+VP +SF GHL GILVG Y T +G +V+
Sbjct: 183 WVELILIHLLVPQSSFIGHLGGILVGCLYCYTFIGEIVD 221
>gi|197304727|ref|NP_001127873.1| rhomboid domain containing 1 [Nasonia vitripennis]
Length = 246
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 95/217 (43%), Positives = 132/217 (60%), Gaps = 1/217 (0%)
Query: 3 RRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHT 62
RR + G++LL Q ++ G IPP TL + +Q+LLY ++ PW+ +CIS
Sbjct: 6 RRQPGLQYGLVLLASQAMNFGIDKIPPATLLGMAVQSLLY-AGMIKVPWNPEDVCISTLK 64
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
IL +D++ V+S EHG DMHLYYNMVS ++KG LE M+G+ F +L+ L + S
Sbjct: 65 ILKHKDWRSFVVSNFEHGSDMHLYYNMVSFLLKGSYLEPMYGTANFALLIGLLSLGCSSM 124
Query: 123 YVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWI 182
YV L Y + + D CAIGFSAVLF++K I + D + F VP+ +A W
Sbjct: 125 YVFLGYALTQITTDYAYYTSCAIGFSAVLFALKVIVVCEEHDRPTDVGGFRVPSKFAVWA 184
Query: 183 ELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
ELV+IHL+VPN+SF GHL GILVG Y T +G +V+
Sbjct: 185 ELVLIHLLVPNSSFIGHLGGILVGCLYCYTFVGEIVD 221
>gi|328779994|ref|XP_001122441.2| PREDICTED: rhomboid domain-containing protein 1-like [Apis
mellifera]
Length = 247
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 96/217 (44%), Positives = 132/217 (60%), Gaps = 1/217 (0%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
+ RR + GI LL Q L+ G IPP TL I+ Q LLYI + PW++ +CISA
Sbjct: 4 IQRRQHGLQYGIYLLYMQALNFGIDKIPPATLLTIIAQVLLYI-GFIKVPWNAEEVCISA 62
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
I D+ ++S EHG DMHLYYNMVSLI+KG LE M+ ++ FV+L++ L S
Sbjct: 63 IKIFKYHDWNSFIISNFEHGSDMHLYYNMVSLILKGSYLEPMYKTMNFVILLTILSFGCS 122
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
Y+ LSYV+ + D QCAIGFS++LF++K I + D H + VP+ A
Sbjct: 123 TMYIGLSYVLMQLTGDYGYYVQCAIGFSSILFALKVIVICEEYDRIHDVGGLRVPSKIAV 182
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRL 217
W+EL++IHL+VP +SF GHL GIL+G Y T +G +
Sbjct: 183 WVELILIHLLVPQSSFIGHLGGILIGCLYCYTFIGEM 219
>gi|307213224|gb|EFN88719.1| Rhomboid domain-containing protein 1 [Harpegnathos saltator]
Length = 247
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 134/217 (61%), Gaps = 1/217 (0%)
Query: 3 RRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHT 62
RR + GI LL Q +++G IPP TL ++ QTLLYI ++ PW++ +CISA
Sbjct: 6 RRQQGLQYGIYLLFTQTINIGIDRIPPATLIGVISQTLLYI-GLIKVPWNAEEVCISAVK 64
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
I ++++ S EHG DMHLYYNM+S I+KG LE ++G++ FV+L+ L S
Sbjct: 65 IFKYKNWRSFFFSNFEHGSDMHLYYNMISFILKGSYLEPIYGTMNFVLLLFILSTGCSAM 124
Query: 123 YVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWI 182
YV L Y++ + D CAIGFSA LF++K I + D H + F V + A W+
Sbjct: 125 YVSLGYILMQLTGDYGYYTTCAIGFSATLFALKVIALCEERDRLHNINGFQVQSKLAVWV 184
Query: 183 ELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
EL++IHL+VPNASF GHL GILVG Y+ T +G +++
Sbjct: 185 ELILIHLLVPNASFVGHLGGILVGCLYSYTFVGEIID 221
>gi|350397339|ref|XP_003484847.1| PREDICTED: rhomboid domain-containing protein 1-like [Bombus
impatiens]
Length = 247
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 132/219 (60%), Gaps = 1/219 (0%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
+ RR + GI LL Q L+ G IPP TL I+ Q LLY+ ++ PW++ +CISA
Sbjct: 4 IQRRQQGLQYGIYLLCMQALNYGIDKIPPATLITIIAQVLLYV-GLIKVPWNAEEVCISA 62
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
+ D+ ++S EHG DMHLYYNMVSLI+KG LE M+G++ FV+L++ L S
Sbjct: 63 IKVFKYHDWNSFLISNFEHGSDMHLYYNMVSLILKGSYLEPMYGTINFVMLLAILSFGCS 122
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
Y L Y + + D QCAIGFSA+LF++K I + D + F V + A
Sbjct: 123 TMYAGLGYALMQLTGDYGYYTQCAIGFSAILFALKVIVVCEEYDRIQDVGGFRVSSKIAV 182
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W+EL++IHL+VP +SF GHL GILVG Y T +G +V+
Sbjct: 183 WVELILIHLLVPQSSFIGHLGGILVGCLYCYTFIGEIVD 221
>gi|332024419|gb|EGI64617.1| Rhomboid domain-containing protein 1 [Acromyrmex echinatior]
Length = 246
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 130/209 (62%), Gaps = 1/209 (0%)
Query: 11 GILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYK 70
GI LL Q L+ G IPP TL I+ QTLLY M ++ W++ +CISA I+ ++++
Sbjct: 13 GIFLLCMQALNFGLDKIPPATLIGIIAQTLLY-MGLIRVSWNAEDVCISAIKIIKYKNWR 71
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
LS EHG DMHLYYNM+S I+KG LE ++G++ FV+L+ L I S YV L Y++
Sbjct: 72 SFFLSNFEHGSDMHLYYNMLSFILKGSYLEPIYGTMNFVLLLGVLSIGCSAMYVFLGYIL 131
Query: 131 YLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLM 190
+ D CAIGFSA LF++K I + D + VP+ A W+EL++IHL+
Sbjct: 132 MQLTGDYGYFTACAIGFSATLFALKVIALCEERDKLQNINGLIVPSKIAVWLELILIHLL 191
Query: 191 VPNASFKGHLSGILVGLCYTETSLGRLVE 219
VPN+SF GHL GILVG Y+ + +G ++
Sbjct: 192 VPNSSFIGHLGGILVGCLYSYSFVGERID 220
>gi|13529623|gb|AAH05518.1| Rhomboid domain containing 1 [Mus musculus]
Length = 315
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 125/220 (56%), Gaps = 6/220 (2%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSL-GICIS 59
M RR G+LLLL QV +G + IPP TL + + ++ PW L CIS
Sbjct: 1 MQRRTRGINTGLLLLLSQVFQIGINNIPPVTLATLAVNVWFFL-----NPWKPLYHSCIS 55
Query: 60 AHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIIST 119
Q+D++RL+LS L HGDD HLY+NMVS++ KG +LER GS F +++ + T
Sbjct: 56 VEKCYQQKDWQRLLLSPLHHGDDWHLYFNMVSMLWKGVKLERRLGSRWFAYVIATFSLLT 115
Query: 120 SVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYA 179
V Y++L + + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 116 GVVYLLLQFTVAELMNQPDFKRNCAVGFSGVLFALKVLSNHYCPGGFVNILGFPVPNRFA 175
Query: 180 PWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W ELV IH P SF GHL+GILVGL YT+ L ++++
Sbjct: 176 CWAELVAIHFCTPGTSFAGHLAGILVGLMYTQGPLKKIMD 215
>gi|170014730|ref|NP_084053.3| rhomboid-related protein 4 [Mus musculus]
gi|170014732|ref|NP_001116157.1| rhomboid-related protein 4 [Mus musculus]
gi|81896101|sp|Q8BHC7.1|RHBL4_MOUSE RecName: Full=Rhomboid-related protein 4; Short=RRP4; AltName:
Full=Rhomboid domain-containing protein 1;
Short=mRHBDD1; AltName: Full=Rhomboid-like protein 4
gi|26325686|dbj|BAC26597.1| unnamed protein product [Mus musculus]
gi|26345628|dbj|BAC36465.1| unnamed protein product [Mus musculus]
gi|26347997|dbj|BAC37647.1| unnamed protein product [Mus musculus]
gi|64213941|gb|AAY41235.1| MSD-50 [Mus musculus]
gi|74209284|dbj|BAE25005.1| unnamed protein product [Mus musculus]
gi|148670185|gb|EDL02132.1| rhomboid domain containing 1, isoform CRA_a [Mus musculus]
gi|148670187|gb|EDL02134.1| rhomboid domain containing 1, isoform CRA_a [Mus musculus]
Length = 315
Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 125/220 (56%), Gaps = 6/220 (2%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSL-GICIS 59
M RR G+LLLL QV +G + IPP TL + + ++ PW L CIS
Sbjct: 1 MQRRTRGINTGLLLLLSQVFQIGINNIPPVTLATLAVNVWFFL-----NPWKPLYHSCIS 55
Query: 60 AHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIIST 119
Q+D++RL+LS L HGDD HLY+NMVS++ KG +LER GS F +++ + T
Sbjct: 56 VEKCYQQKDWQRLLLSPLHHGDDWHLYFNMVSMLWKGVKLERRLGSRWFAYVIATFSLLT 115
Query: 120 SVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYA 179
V Y++L + + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 116 GVVYLLLQFTVAELLNQPDFKRNCAVGFSGVLFALKVLSNHYCPGGFVNILGFPVPNRFA 175
Query: 180 PWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W ELV IH P SF GHL+GILVGL YT+ L ++++
Sbjct: 176 CWAELVAIHFCTPGTSFAGHLAGILVGLMYTQGPLKKIMD 215
>gi|12853402|dbj|BAB29735.1| unnamed protein product [Mus musculus]
Length = 315
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 125/220 (56%), Gaps = 6/220 (2%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSL-GICIS 59
M RR G+LLLL QV +G + IPP TL + + ++ PW L CIS
Sbjct: 1 MQRRTRGINTGLLLLLSQVFQIGINNIPPVTLATLAVNVWFFL-----NPWKPLYHSCIS 55
Query: 60 AHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIIST 119
Q+D++RL+LS L HGDD HLY+NMVS++ KG +LER GS F +++ + T
Sbjct: 56 VEKCYQQKDWQRLLLSPLHHGDDWHLYFNMVSMLWKGVKLERRLGSRWFAYVIATFSLLT 115
Query: 120 SVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYA 179
V Y++L + + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 116 GVVYLLLQFTVAELLNQPDFKRNCAVGFSGVLFALKVLSNHYCPGGFVNILGFPVPNRFA 175
Query: 180 PWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W ELV IH P SF GHL+GILVGL YT+ L ++++
Sbjct: 176 CWAELVAIHFCTPGTSFAGHLAGILVGLMYTQGPLKKIMD 215
>gi|148670186|gb|EDL02133.1| rhomboid domain containing 1, isoform CRA_b [Mus musculus]
Length = 296
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 125/220 (56%), Gaps = 6/220 (2%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSL-GICIS 59
M RR G+LLLL QV +G + IPP TL + + ++ PW L CIS
Sbjct: 1 MQRRTRGINTGLLLLLSQVFQIGINNIPPVTLATLAVNVWFFL-----NPWKPLYHSCIS 55
Query: 60 AHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIIST 119
Q+D++RL+LS L HGDD HLY+NMVS++ KG +LER GS F +++ + T
Sbjct: 56 VEKCYQQKDWQRLLLSPLHHGDDWHLYFNMVSMLWKGVKLERRLGSRWFAYVIATFSLLT 115
Query: 120 SVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYA 179
V Y++L + + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 116 GVVYLLLQFTVAELLNQPDFKRNCAVGFSGVLFALKVLSNHYCPGGFVNILGFPVPNRFA 175
Query: 180 PWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W ELV IH P SF GHL+GILVGL YT+ L ++++
Sbjct: 176 CWAELVAIHFCTPGTSFAGHLAGILVGLMYTQGPLKKIMD 215
>gi|355565238|gb|EHH21727.1| hypothetical protein EGK_04857 [Macaca mulatta]
Length = 316
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 138/264 (52%), Gaps = 4/264 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LLL Q+ +VG + IPP TL + + + + +N + S C+S
Sbjct: 1 MQRRSRGINTGLILLLSQIFNVGINNIPPVTLATLAL-NIWFFLNPQKPLYSS---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H +D HLY+NM S++ KG LER GS F ++++ I T
Sbjct: 57 EKCCQQKDWQRLLLSPLHHANDWHLYFNMASMLWKGIHLERRLGSRWFALVITTFSILTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLLLQFAVAEFMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRVVNTLTNVFKLDD 240
W+ELV IHL P SF GHL+GILVGL YT+ L +++E S V + +
Sbjct: 177 WVELVAIHLFSPGTSFAGHLAGILVGLMYTQGPLKKMMEACAGGFSSNVGYPGQQYHFNS 236
Query: 241 DCNGDDEDSDTSASFLDFTDNTKN 264
+ +D D + + +N
Sbjct: 237 SGSSGYQDYDPHGRPGHYEEAPRN 260
>gi|109101279|ref|XP_001110165.1| PREDICTED: rhomboid domain-containing protein 1-like isoform 4
[Macaca mulatta]
gi|297265038|ref|XP_001110119.2| PREDICTED: rhomboid domain-containing protein 1-like isoform 3
[Macaca mulatta]
Length = 316
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 138/264 (52%), Gaps = 4/264 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LLL Q+ +VG + IPP TL + + + + +N + S C+S
Sbjct: 1 MQRRSRGINTGLILLLSQIFNVGINNIPPVTLATLAL-NIWFFLNPQKPLYSS---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H +D HLY+NM S++ KG LER GS F ++++ I T
Sbjct: 57 EKCCQQKDWQRLLLSPLHHANDWHLYFNMASMLWKGIHLERRLGSRWFALVITTFSILTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLLLQFAVAEFMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRVVNTLTNVFKLDD 240
W+ELV IHL P SF GHL+GILVGL YT+ L +++E S V + +
Sbjct: 177 WVELVAIHLFSPGTSFAGHLAGILVGLMYTQGPLKKMMEACAGGFSSNVGYPGQQYYFNS 236
Query: 241 DCNGDDEDSDTSASFLDFTDNTKN 264
+ +D D + + +N
Sbjct: 237 SGSSGYQDYDPHGRPGHYEEAPRN 260
>gi|355750890|gb|EHH55217.1| hypothetical protein EGM_04375 [Macaca fascicularis]
Length = 316
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 138/264 (52%), Gaps = 4/264 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LLL Q+ +VG + IPP TL + + + + +N + S C+S
Sbjct: 1 MQRRSRGINTGLILLLSQIFNVGINNIPPVTLATLAL-NIWFFLNPQKPLYSS---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H +D HLY+NM S++ KG LER GS F ++++ I T
Sbjct: 57 EKCCQQKDWQRLLLSPLHHANDWHLYFNMASMLWKGIHLERRLGSRWFALVITTFSILTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLLLQFAVAEFMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRVVNTLTNVFKLDD 240
W+ELV IHL P SF GHL+GILVGL YT+ L +++E S V + +
Sbjct: 177 WVELVAIHLFSPGTSFAGHLAGILVGLMYTQGPLKKMMEACAGGFSSNVGYPGQQYYFNG 236
Query: 241 DCNGDDEDSDTSASFLDFTDNTKN 264
+ +D D + + +N
Sbjct: 237 SGSSGYQDYDPHGRPGHYEEAPRN 260
>gi|16041108|dbj|BAB69721.1| hypothetical protein [Macaca fascicularis]
Length = 261
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 136/257 (52%), Gaps = 4/257 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LLL Q+ +VG + IPP TL + + + + +N + S C+S
Sbjct: 1 MQRRSRGINTGLVLLLSQIFNVGINNIPPVTLATLAL-NIWFFLNPQKPLYSS---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H +D HLY+NM S++ KG LER GS F ++++ I T
Sbjct: 57 EKCCQQKDWQRLLLSPLHHANDWHLYFNMASMLWKGIHLERRLGSRWFALVITTFSILTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLLLQFAVAEFMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRVVNTLTNVFKLDD 240
W+ELV IHL P SF GHL+GILVGL YT+ L +++E S V + +
Sbjct: 177 WVELVAIHLFSPGTSFAGHLAGILVGLMYTQGPLKKMMEACAGGFSSNVGYPGQQYYFNS 236
Query: 241 DCNGDDEDSDTSASFLD 257
+ +D SFL
Sbjct: 237 SGSSGYQDYCPFGSFLK 253
>gi|291392324|ref|XP_002712556.1| PREDICTED: rhomboid domain containing 1 [Oryctolagus cuniculus]
Length = 316
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 126/219 (57%), Gaps = 4/219 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LL Q+ VG + IPP TL + + L+ +N L ++S CIS
Sbjct: 1 MQRRSRGINTGLILLFSQIFRVGINNIPPVTLATLALNIWLF-LNPLKPLYNS---CISV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS + H DD HLY+NMVS++ KG LER GS F +++ + T
Sbjct: 57 ERCYQQKDWQRLLLSPVHHADDWHLYFNMVSMLWKGVNLERRLGSKWFAYIIATFSLLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L +V ++ CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLLLQFVFAEFMNEPDYRRNCAVGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W ELV IH P +SF GHL+GILVGL YT+ L +++E
Sbjct: 177 WAELVAIHFFTPGSSFSGHLAGILVGLMYTQGPLKKMME 215
>gi|67846060|ref|NP_001020062.1| rhomboid-related protein 4 [Rattus norvegicus]
gi|81908697|sp|Q4V8F3.1|RHBL4_RAT RecName: Full=Rhomboid-related protein 4; Short=RRP4; AltName:
Full=Rhomboid domain-containing protein 1;
Short=rRHBDD1; AltName: Full=Rhomboid-like protein 4
gi|66910605|gb|AAH97416.1| Rhomboid domain containing 1 [Rattus norvegicus]
Length = 316
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 123/220 (55%), Gaps = 6/220 (2%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSL-GICIS 59
M RR + G+LLLL QV +G + IPP TL + + ++ PW L CIS
Sbjct: 1 MQRRTRGIDTGLLLLLSQVFHIGINNIPPVTLATLAVNVWFFL-----NPWKPLYHSCIS 55
Query: 60 AHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIIST 119
Q D++RL+LS + HGDD HLY+NMVS++ KG +LE+ GS F +++ + T
Sbjct: 56 VEKCYQQNDWQRLLLSPVHHGDDWHLYFNMVSMLWKGVKLEKRLGSRWFAYIIATFSLLT 115
Query: 120 SVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYA 179
V Y++L + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 116 GVVYLLLQFASAELMNQPDFKRNCAVGFSGVLFALKVLSNHYCPGGFVNILGFPVPNRFA 175
Query: 180 PWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W EL IH P SF GHL+GILVGL YT+ L ++++
Sbjct: 176 CWAELAAIHFCTPGTSFAGHLAGILVGLMYTQGPLKKIMD 215
>gi|344292440|ref|XP_003417935.1| PREDICTED: rhomboid domain-containing protein 1-like [Loxodonta
africana]
Length = 315
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 126/221 (57%), Gaps = 8/221 (3%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR +G++LLL Q+ VG + IPP TL + + T L+ +N + +DS CIS
Sbjct: 1 MQRRSRGINIGLILLLSQIFHVGINNIPPVTLATLALNTWLF-LNPVKPLFDS---CISV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS H DD HLY+NM S++ KG LER GS F +++ + T
Sbjct: 57 EKCYQQKDWQRLLLSPFHHADDWHLYFNMASMLWKGINLERRLGSRWFAYIIATFSLLTG 116
Query: 121 VCYVML--SYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVY 178
V Y++L S +L D CA+GFS VLF++K + P +L VP Y
Sbjct: 117 VVYLLLESSLAAFLDEPDFRR--TCAVGFSGVLFALKVLNNHYCPGCFVNILGLPVPNRY 174
Query: 179 APWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
A W+ELV IH P SF GHL+GILVGL YT+ L +++E
Sbjct: 175 ACWVELVAIHFFTPGTSFAGHLAGILVGLMYTQGPLKKIME 215
>gi|395528133|ref|XP_003766186.1| PREDICTED: rhomboid domain-containing protein 1 [Sarcophilus
harrisii]
Length = 344
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 129/220 (58%), Gaps = 6/220 (2%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G+LLL +Q++ VG +PP TL I + L++ + W +C+S
Sbjct: 1 MQRRARGFHQGLLLLFFQIMQVGITNVPPVTLACIALNIWLFLNPLKPIYW----LCLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
+ ++D++RL+LS H DD HLY+NMVS++ KG LER GS F +++ + T
Sbjct: 57 ESCYEKKDWQRLLLSPFHHADDWHLYFNMVSMLWKGLTLERRLGSFWFAYIIAVFSLLTG 116
Query: 121 VCYVMLSY-VIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYA 179
V Y+ L Y V L++ ++Y CAIGFS VLF++K + +P ++ +P YA
Sbjct: 117 VVYLALEYTVAELLDQREFKVY-CAIGFSGVLFALKVLSNNYNPGGHTNIMGMYIPNKYA 175
Query: 180 PWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W+ELV+IHL+ P SF GHL+GI+VGL YT L ++E
Sbjct: 176 CWVELVMIHLLSPRTSFAGHLAGIIVGLMYTLGPLKMIME 215
>gi|426338762|ref|XP_004033341.1| PREDICTED: rhomboid-related protein 4 [Gorilla gorilla gorilla]
Length = 315
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 137/265 (51%), Gaps = 13/265 (4%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LLL Q+ VG + IPP TL + + + + +N + S C+S
Sbjct: 1 MQRRSRGINTGLILLLSQIFHVGINNIPPVTLATLAL-NIWFFLNPQKPLYSS---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H DD HLY+NM S++ KG LER GS F +++ + T
Sbjct: 57 EKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYVITTFSVLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLLLQFAVAEFMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRVVNTLTNVFKLDD 240
W+ELV IHL P SF GHL+GILVGL YT+ L +++E S V +
Sbjct: 177 WVELVAIHLFSPGTSFAGHLAGILVGLMYTQGPLKKIMEACAGGFSSSVGYPGQQYYF-- 234
Query: 241 DCNGDDEDSDTSASFLDFTDNTKND 265
+S S+ + D+ + + D
Sbjct: 235 -------NSSGSSGYQDYYPHGRPD 252
>gi|380817122|gb|AFE80435.1| rhomboid domain-containing protein 1 [Macaca mulatta]
gi|380817124|gb|AFE80436.1| rhomboid domain-containing protein 1 [Macaca mulatta]
gi|383422139|gb|AFH34283.1| rhomboid domain-containing protein 1 [Macaca mulatta]
gi|383422141|gb|AFH34284.1| rhomboid domain-containing protein 1 [Macaca mulatta]
gi|384949790|gb|AFI38500.1| rhomboid domain-containing protein 1 [Macaca mulatta]
gi|384949792|gb|AFI38501.1| rhomboid domain-containing protein 1 [Macaca mulatta]
Length = 316
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 133/248 (53%), Gaps = 4/248 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LLL Q+ +VG + IPP TL + + + + +N + S C+S
Sbjct: 1 MQRRSRGINTGLILLLSQIFNVGINNIPPVTLATLAL-NIWFFLNPQKPLYSS---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H +D HLY+NM S++ KG LER GS F ++++ I T
Sbjct: 57 EKCCQQKDWQRLLLSPLHHANDWHLYFNMASMLWKGIHLERRLGSRWFALVITTFSILTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLLLQFAVAEFMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRVVNTLTNVFKLDD 240
W+ELV IHL P SF GHL+GILVGL YT+ L +++E S V + +
Sbjct: 177 WVELVAIHLFSPGTSFAGHLAGILVGLMYTQGPLKKMMEACAGGFSSNVGYPGQQYHFNS 236
Query: 241 DCNGDDED 248
+ +D
Sbjct: 237 SGSSGYQD 244
>gi|33300639|ref|NP_115652.2| rhomboid-related protein 4 [Homo sapiens]
gi|263190666|ref|NP_001161080.1| rhomboid-related protein 4 [Homo sapiens]
gi|74723955|sp|Q8TEB9.1|RHBL4_HUMAN RecName: Full=Rhomboid-related protein 4; Short=RRP4; AltName:
Full=Rhomboid domain-containing protein 1; AltName:
Full=Rhomboid-like protein 4
gi|18676811|dbj|BAB85031.1| unnamed protein product [Homo sapiens]
gi|51947534|gb|AAU14246.1| HSD-50 [Homo sapiens]
gi|71680537|gb|AAI01265.1| Rhomboid domain containing 1 [Homo sapiens]
gi|71682034|gb|AAI01264.1| Rhomboid domain containing 1 [Homo sapiens]
gi|71682037|gb|AAI01266.1| Rhomboid domain containing 1 [Homo sapiens]
gi|83405869|gb|AAI11057.1| Rhomboid domain containing 1 [Homo sapiens]
gi|119591247|gb|EAW70841.1| rhomboid domain containing 1, isoform CRA_a [Homo sapiens]
gi|119591248|gb|EAW70842.1| rhomboid domain containing 1, isoform CRA_a [Homo sapiens]
Length = 315
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 137/265 (51%), Gaps = 13/265 (4%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LLL Q+ VG + IPP TL + + + + +N + S C+S
Sbjct: 1 MQRRSRGINTGLILLLSQIFHVGINNIPPVTLATLAL-NIWFFLNPQKPLYSS---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H DD HLY+NM S++ KG LER GS F +++ + T
Sbjct: 57 EKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYVITAFSVLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLLLQFAVAEFMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRVVNTLTNVFKLDD 240
W+ELV IHL P SF GHL+GILVGL YT+ L +++E S V +
Sbjct: 177 WVELVAIHLFSPGTSFAGHLAGILVGLMYTQGPLKKIMEACAGGFSSSVGYPGRQYYF-- 234
Query: 241 DCNGDDEDSDTSASFLDFTDNTKND 265
+S S+ + D+ + + D
Sbjct: 235 -------NSSGSSGYQDYYPHGRPD 252
>gi|71682851|gb|AAI01263.1| Rhomboid domain containing 1 [Homo sapiens]
Length = 315
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 137/265 (51%), Gaps = 13/265 (4%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LLL Q+ VG + IPP TL + + + + +N + S C+S
Sbjct: 1 MQRRSRGINTGLILLLSQIFHVGINNIPPVTLATLAL-NIWFFLNPQKPLYSS---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H DD HLY+NM S++ KG LER GS F +++ + T
Sbjct: 57 EKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYVITAFSVLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLLLQFAVAEFMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRVVNTLTNVFKLDD 240
W+ELV IHL P SF GHL+GILVGL YT+ L +++E S V +
Sbjct: 177 WVELVAIHLFSPGTSFAGHLAGILVGLMYTQGPLKKIMEACAGGFSSSVGYPGRQYYF-- 234
Query: 241 DCNGDDEDSDTSASFLDFTDNTKND 265
+S S+ + D+ + + D
Sbjct: 235 -------NSSGSSGYQDYYPHGRPD 252
>gi|50752018|ref|XP_422616.1| PREDICTED: rhomboid domain-containing protein 1 [Gallus gallus]
Length = 317
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 131/219 (59%), Gaps = 4/219 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR R G+LLLLYQ+ VG IP TL +LI + + +N + ++ CIS
Sbjct: 1 MQRRQGRVNAGLLLLLYQISQVGLQNIPSVTLA-VLILNVFFFLNPMRPLHEA---CISV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
+++++RL+LS + H DD HLYYNMVS++ KG LER GS+ F +++ + T
Sbjct: 57 KEAFYRQNWQRLLLSPVHHVDDWHLYYNMVSMLWKGITLERKLGSMWFAYIIAVFSVLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
+ YV+L +++ + +D + CA+GFS VLF++K + +P +L + + YA
Sbjct: 117 IVYVLLEFMLVKILNDPSYEMSCAVGFSGVLFALKVLNNHYNPGRVSSVLGLQISSKYAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W+ELV IH + P SF GHL+GILVGL YT L ++++
Sbjct: 177 WVELVAIHFIAPRTSFAGHLAGILVGLMYTMGPLKKIMK 215
>gi|332251234|ref|XP_003274752.1| PREDICTED: uncharacterized protein LOC100579431 isoform 1 [Nomascus
leucogenys]
gi|332251236|ref|XP_003274753.1| PREDICTED: uncharacterized protein LOC100579431 isoform 2 [Nomascus
leucogenys]
Length = 316
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 137/265 (51%), Gaps = 13/265 (4%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LLL Q+ VG + IPP TL + + + + +N + S C+S
Sbjct: 1 MQRRSRGINTGLILLLSQIFHVGINNIPPVTLATLAL-NIWFFLNPQKPLYSS---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H DD HLY+NM S++ KG LER GS F ++S + T
Sbjct: 57 EKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYVISTFSVLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLLLQFAVAEFMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRVVNTLTNVFKLDD 240
W+ELV IHL+ P SF GHL+GILVGL YT+ L ++E S V +
Sbjct: 177 WVELVAIHLLSPGTSFAGHLAGILVGLMYTQGPLKTIMEACAGGFSSNVGYPGQQYYF-- 234
Query: 241 DCNGDDEDSDTSASFLDFTDNTKND 265
+S S+ + D+ + + D
Sbjct: 235 -------NSSGSSGYQDYYPHGRPD 252
>gi|296205750|ref|XP_002749971.1| PREDICTED: rhomboid domain-containing protein 1 [Callithrix
jacchus]
Length = 316
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 124/219 (56%), Gaps = 4/219 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LLL Q+ VG + IPP TL + + + + +N L + S C+S
Sbjct: 1 MQRRSRGINAGLILLLSQIFHVGINNIPPVTLATLAL-NIWFFLNPLKSLYSS---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q D++RL+LS H DD HLY+NM S++ KG LE+ GS FV +++ I T
Sbjct: 57 EKCYQQNDWQRLLLSPFHHADDWHLYFNMASMLWKGINLEKRLGSRWFVCVITTFSILTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLLLQFAVAEFMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNVLGFPVPNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W+ELV IHL P SF GHL+GILVGL YT+ L +++E
Sbjct: 177 WVELVAIHLCSPGTSFAGHLAGILVGLMYTQGPLKKIME 215
>gi|402889541|ref|XP_003908071.1| PREDICTED: rhomboid domain-containing protein 1, partial [Papio
anubis]
Length = 285
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 132/248 (53%), Gaps = 4/248 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LLL Q+ +VG + IPP TL + + + + +N + S C+S
Sbjct: 1 MQRRSRGINTGLILLLSQIFNVGINNIPPVTLATLAL-NIWFFLNPQKPLYSS---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H +D HLY+NM S++ KG LER GS F +++ + T
Sbjct: 57 EKCCQQKDWQRLLLSPLHHANDWHLYFNMASMLWKGIHLERRLGSRWFAFVITTFSVLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLLLQFAVAEFMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRVVNTLTNVFKLDD 240
W+ELV IHL P SF GHL+GILVGL YT+ L +++E S V + +
Sbjct: 177 WVELVAIHLFSPGTSFAGHLAGILVGLMYTQGPLKKMMEACAGGFSSNVGYPGQQYYFNS 236
Query: 241 DCNGDDED 248
+ +D
Sbjct: 237 SGSSGYQD 244
>gi|410036272|ref|XP_003950028.1| PREDICTED: rhomboid-related protein 4 [Pan troglodytes]
gi|410211256|gb|JAA02847.1| rhomboid domain containing 1 [Pan troglodytes]
gi|410266108|gb|JAA21020.1| rhomboid domain containing 1 [Pan troglodytes]
gi|410301220|gb|JAA29210.1| rhomboid domain containing 1 [Pan troglodytes]
gi|410339123|gb|JAA38508.1| rhomboid domain containing 1 [Pan troglodytes]
Length = 315
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 124/219 (56%), Gaps = 4/219 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LLL Q+ VG + IPP TL + + + + +N + S C+S
Sbjct: 1 MQRRSRGINTGLILLLSQIFHVGINNIPPVTLATLAL-NIWFFLNPQKPLYSS---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H DD HLY+NM S++ KG LER GS F +++ + T
Sbjct: 57 EKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYVITTFSVLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLLLQFAVAEFMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W+ELV IHL P SF GHL+GILVGL YT+ L +++E
Sbjct: 177 WVELVAIHLFSPGTSFAGHLAGILVGLMYTQGPLKKIME 215
>gi|73994096|ref|XP_543275.2| PREDICTED: rhomboid domain-containing protein 1 [Canis lupus
familiaris]
Length = 316
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 123/220 (55%), Gaps = 4/220 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LLL Q+ VG + IPP TL + + + + +N L ++S C+S
Sbjct: 1 MQRRSRGINAGLILLLSQIFHVGINNIPPVTLATLAL-NVWFFLNPLKPLYES---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H DD HLY+NM S++ KG LER GS F ++ + T
Sbjct: 57 EKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYIIVTFSLLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y+ L + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLFLEFALAEFTDEPGFRRNCAVGFSGVLFALKVLNNHYCPGGFANILGFPVPNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVER 220
W ELV IH + P SF GHL+GILVGL YT L +++E+
Sbjct: 177 WAELVAIHFISPGTSFAGHLAGILVGLMYTHGPLKKIMEK 216
>gi|397502459|ref|XP_003821875.1| PREDICTED: rhomboid domain-containing protein 1 [Pan paniscus]
Length = 315
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 124/219 (56%), Gaps = 4/219 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LLL Q+ VG + IPP TL + + + + +N + S C+S
Sbjct: 1 MQRRSRGINTGLILLLSQIFHVGINNIPPVTLATLAL-NIWFFLNPQKPLYSS---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H DD HLY+NM S++ KG LER GS F +++ + T
Sbjct: 57 EKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYVITTFSVLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLLLQFAVAEFMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W+ELV IHL P SF GHL+GILVGL YT+ + +++E
Sbjct: 177 WVELVAIHLFSPGTSFAGHLAGILVGLMYTQGPVKKIME 215
>gi|417414315|gb|JAA53453.1| Putative rhomboid domain-containing protein 1, partial [Desmodus
rotundus]
Length = 287
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 124/219 (56%), Gaps = 4/219 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LLL Q+ VG + IPP TL + I ++ + +P L C+S
Sbjct: 1 MQRRSRGVNAGLILLLSQIFQVGVNNIPPVTLATLAINIWFFLSPL--KP--LLSSCLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
T ++D++RL+LS H DD HLY+NMVS++ KG +LER GS F +++ + T
Sbjct: 57 ETCYQEKDWQRLLLSPFHHADDWHLYFNMVSMLWKGIQLERRLGSRWFAYVITTFSLLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLVLESALAEFMEEPGFKMNCAVGFSGVLFALKVLSNHYCPGGFVNVLGFPVPNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W ELV IHL+ P SF GHL+GILVGL YT L +L+E
Sbjct: 177 WAELVAIHLISPGTSFAGHLAGILVGLMYTHGPLKKLME 215
>gi|345307084|ref|XP_001505522.2| PREDICTED: rhomboid domain-containing protein 1-like
[Ornithorhynchus anatinus]
Length = 318
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 125/221 (56%), Gaps = 6/221 (2%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSL-GICIS 59
M ++ R G+LLL Q+ +G IPP TL + + L++ P SL CIS
Sbjct: 1 MQQKSRRVNAGLLLLFSQIAQIGITNIPPVTLASLALNIFLFL-----NPVKSLRKTCIS 55
Query: 60 AHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIIST 119
Q D++RL+LS H DD HLY+NMVS++ KG +LE+ GS +F ++++ +
Sbjct: 56 VEECFEQGDWQRLLLSPFHHADDWHLYFNMVSMLWKGMKLEKRLGSGKFAIIIASFSVLI 115
Query: 120 SVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYA 179
+ Y++L + + + QCA+GFS VLF++K + P + L+ F V Y+
Sbjct: 116 GIVYMILEFALAEFLAEPAYKMQCAVGFSGVLFALKVLNNHYHPGGSINLMGFPVSNRYS 175
Query: 180 PWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVER 220
W+ELV IHL+ P SF GHL+GILVGL YT L ++ER
Sbjct: 176 CWVELVAIHLLSPGTSFAGHLAGILVGLMYTLGPLKTILER 216
>gi|403266722|ref|XP_003925512.1| PREDICTED: rhomboid domain-containing protein 1 [Saimiri
boliviensis boliviensis]
Length = 315
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 124/219 (56%), Gaps = 4/219 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LLL Q+ VG + IPP TL + + + + +N L + S C+S
Sbjct: 1 MQRRSRGINTGLILLLSQIFHVGINNIPPVTLATLAL-NIWFFLNPLKSLYSS---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q D++RL+LS + H DD HLY+NM S++ KG LE+ GS F +++ + T
Sbjct: 57 ERCYQQNDWQRLLLSPVHHADDWHLYFNMASMLWKGIHLEKRLGSRWFACVITTFSVLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLLLQFAVAEFMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNVLGFPVPNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W+ELV IHL P SF GHL+GILVGL YT+ L +++E
Sbjct: 177 WVELVAIHLCSPGTSFAGHLAGILVGLMYTQGPLKKIME 215
>gi|281342330|gb|EFB17914.1| hypothetical protein PANDA_008422 [Ailuropoda melanoleuca]
Length = 286
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 122/220 (55%), Gaps = 4/220 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LLL Q+ VG IPP TL + + L+ +N L ++S C+S
Sbjct: 1 MQRRSRGIHAGLILLLSQIFHVGISNIPPVTLATLALNIWLF-LNPLKPLFES---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H DD HLY+NM S++ KG LER GS F ++ + T
Sbjct: 57 EKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYIIVTFSVLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y+ L + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLFLEFALAESMGEPGFRRNCAVGFSGVLFALKVLNNHYCPGGFANVLGFPVPNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVER 220
W ELV IH + P SF GHL+GILVGL YT L +++E+
Sbjct: 177 WAELVAIHFISPGTSFAGHLAGILVGLMYTHGPLKKIMEK 216
>gi|326925844|ref|XP_003209118.1| PREDICTED: rhomboid domain-containing protein 1-like [Meleagris
gallopavo]
Length = 317
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 129/219 (58%), Gaps = 4/219 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR R G+LLLLYQ+ VG IP TL ++++ ++ V +P CIS
Sbjct: 1 MQRRQGRVNAGLLLLLYQISQVGLQNIPSVTLAVLVLNVFFFLNPV--RPLHE--ACISV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
+++++RL+LS + H DD HLYYNM+S++ KG LER GSV F +++ + T
Sbjct: 57 REAFYRQNWQRLLLSPVHHVDDWHLYYNMISMLWKGIMLERRVGSVWFAYIIAVFSVLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
+ YV+L ++ + +D + CA+GFS VLF++K + +P +L + + YA
Sbjct: 117 IVYVLLELMLVKILNDPSYEMSCAVGFSGVLFALKVLNNHYNPGRVSSVLGLQISSKYAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W+ELV IH + P SF GHL+GILVGL YT L ++++
Sbjct: 177 WVELVAIHFISPGTSFAGHLAGILVGLMYTMGPLKKIMK 215
>gi|301768701|ref|XP_002919769.1| PREDICTED: rhomboid domain-containing protein 1-like [Ailuropoda
melanoleuca]
Length = 316
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 122/220 (55%), Gaps = 4/220 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LLL Q+ VG IPP TL + + L+ +N L ++S C+S
Sbjct: 1 MQRRSRGIHAGLILLLSQIFHVGISNIPPVTLATLALNIWLF-LNPLKPLFES---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H DD HLY+NM S++ KG LER GS F ++ + T
Sbjct: 57 EKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYIIVTFSVLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y+ L + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLFLEFALAESMGEPGFRRNCAVGFSGVLFALKVLNNHYCPGGFANVLGFPVPNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVER 220
W ELV IH + P SF GHL+GILVGL YT L +++E+
Sbjct: 177 WAELVAIHFISPGTSFAGHLAGILVGLMYTHGPLKKIMEK 216
>gi|348544033|ref|XP_003459486.1| PREDICTED: rhomboid domain-containing protein 1-like [Oreochromis
niloticus]
Length = 323
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 132/237 (55%), Gaps = 5/237 (2%)
Query: 9 ELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRD 68
+LG+LLL QV +G + IPP TL ++ + LY+ A P C+S +D
Sbjct: 9 QLGLLLLASQVFQLGLNNIPPITLAVLALNVYLYLFP--AAP--LFQACVSVQQAYWLKD 64
Query: 69 YKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
++RL+LS L H DD HLY+NMVS + KGR LE+ G F+ L+S + T + Y++L
Sbjct: 65 WRRLLLSPLHHADDWHLYFNMVSFLWKGRRLEQRLGGPWFLYLLSVFSLLTGLVYLVLEA 124
Query: 129 VIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIH 188
++ + D + CA+GFS VLF++K + P ++ V + YA W+ELV+IH
Sbjct: 125 LLTELMQDQSYSMACAVGFSGVLFALKVLNNHYYPGSVTYVMGLPVSSRYASWVELVLIH 184
Query: 189 LMVPNASFKGHLSGILVGLCYTETSLGRLVER-SGRSVSRVVNTLTNVFKLDDDCNG 244
+ P SF GHLSGILVGL YT L +++++ +G S N+ + +G
Sbjct: 185 ITSPGTSFVGHLSGILVGLLYTTGPLKKIMKKCAGFVTSNGYNSQPGAYYRSSGPSG 241
>gi|449278548|gb|EMC86359.1| Rhomboid domain-containing protein 1 [Columba livia]
Length = 220
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 128/219 (58%), Gaps = 4/219 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR R G+LLLLYQ+ VG IP TL ++ + L++ V +P +CIS
Sbjct: 1 MQRRQGRVSAGLLLLLYQISQVGLQNIPSVTLGVLALNIFLFLNPV--RPLHE--VCISV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
+ +R+++RL+LS + H DD HLYYNMVS++ KG LE+ SV F +++ +
Sbjct: 57 NEGFYKRNWQRLLLSPVHHADDWHLYYNMVSMLWKGIMLEKKLKSVWFAYIIAVFSVLIG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y+ML +++ + D + CA+GFS VLF++K + +P +L + + YA
Sbjct: 117 VVYMMLEFMLVEILDDPSYEMNCAVGFSGVLFALKVLNNHYNPGRVSSVLGLPIASKYAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W+ELV IH + P SF GHL+GILVGL YT L +++
Sbjct: 177 WVELVAIHFISPGTSFAGHLAGILVGLMYTMGPLKKIMR 215
>gi|344257225|gb|EGW13329.1| Rhomboid domain-containing protein 1 [Cricetulus griseus]
Length = 298
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 127/219 (57%), Gaps = 4/219 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR +G+L+LL QV+ VG + IPP TL + + + + +N L + S CIS
Sbjct: 1 MQRRSRGINVGLLMLLSQVVHVGINNIPPVTLATLAL-NIWFFLNPLKPLYYS---CISV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H DD HLY+NMVS++ KG +LER G+ F L++ + T
Sbjct: 57 EKCYQQKDWQRLLLSPLHHADDWHLYFNMVSMLWKGIKLERRLGTRWFAYLLTTFSLLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L + + + + CA+GFS VLF++K + P +L F VP A
Sbjct: 117 VVYLVLQFTLAELMNQPDFRRNCAVGFSGVLFALKVLSNHYFPGGFVNVLGFLVPNRLAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W ELV IH P SF GHL+GILVGL YT+ L +++E
Sbjct: 177 WAELVAIHFCTPGTSFAGHLAGILVGLMYTQGPLKKIME 215
>gi|354501643|ref|XP_003512899.1| PREDICTED: rhomboid domain-containing protein 1-like [Cricetulus
griseus]
Length = 307
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 127/219 (57%), Gaps = 4/219 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR +G+L+LL QV+ VG + IPP TL + + + + +N L + S CIS
Sbjct: 1 MQRRSRGINVGLLMLLSQVVHVGINNIPPVTLATLAL-NIWFFLNPLKPLYYS---CISV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H DD HLY+NMVS++ KG +LER G+ F L++ + T
Sbjct: 57 EKCYQQKDWQRLLLSPLHHADDWHLYFNMVSMLWKGIKLERRLGTRWFAYLLTTFSLLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L + + + + CA+GFS VLF++K + P +L F VP A
Sbjct: 117 VVYLVLQFTLAELMNQPDFRRNCAVGFSGVLFALKVLSNHYFPGGFVNVLGFLVPNRLAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W ELV IH P SF GHL+GILVGL YT+ L +++E
Sbjct: 177 WAELVAIHFCTPGTSFAGHLAGILVGLMYTQGPLKKIME 215
>gi|410969603|ref|XP_003991284.1| PREDICTED: rhomboid-related protein 4 [Felis catus]
Length = 316
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 4/219 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LLL Q+ VG + IPP TL + + ++ + L C+S
Sbjct: 1 MQRRSRGINTGLILLLSQIFHVGVNNIPPVTLATLAVNIWFFLSPLKPL----LSSCLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
T Q+D++RL+LS H DD HLY+NM S++ KG LER GS F ++ + T
Sbjct: 57 ETCYQQKDWQRLLLSPFHHADDWHLYFNMASMLWKGINLERRLGSKWFAYVIVTFSLLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L + + ++ CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLLLEFALAEFMNEPGFRRNCAVGFSGVLFALKVLNNHYCPGGFANVLGFPVPNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W ELV IH + P ASF GHL+GILVGL YT L +++E
Sbjct: 177 WAELVAIHFISPGASFAGHLAGILVGLMYTLGPLKKIME 215
>gi|324513372|gb|ADY45497.1| Rhomboid domain-containing protein 1 [Ascaris suum]
Length = 331
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/223 (40%), Positives = 134/223 (60%), Gaps = 10/223 (4%)
Query: 3 RRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLA-QPWDSLGICISAH 61
+R ++ G+ LL Y +L + IPP TL IL Q +++ V PW + +C+
Sbjct: 4 QRRRQQNFGVYLLAYHLLQNEY--IPPVTLGAILFQMAVFLGFVPPIGPWKTREMCLLPS 61
Query: 62 TILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSV 121
I+ R++ R++ S + HGDDMHLYYNM+SL+ KGR LER GS +F++++ +++S
Sbjct: 62 RIIGHREWIRMLASVVMHGDDMHLYYNMISLLWKGRRLERRLGSWRFLLILLVFAVASSC 121
Query: 122 CYVMLSY----VIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNF-SVPA 176
V LS V +L H + ++QCA+GFS VLF++K + T P LL + +P+
Sbjct: 122 GIVALSVLATDVFHL--HYLALMHQCAVGFSGVLFALKVLHTTYFPYEDSMLLGWMPIPS 179
Query: 177 VYAPWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
YA W EL++I + P ASF GHLSGILVGL YT+ L V+
Sbjct: 180 RYACWAELLLIQFLAPEASFIGHLSGILVGLLYTKGPLKYFVD 222
>gi|149711182|ref|XP_001496461.1| PREDICTED: rhomboid domain-containing protein 1-like [Equus
caballus]
Length = 316
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 121/219 (55%), Gaps = 4/219 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LLL Q+ VG + IPP TL + + L+ +N L ++S C+S
Sbjct: 1 MQRRSRGINTGLILLLSQIFHVGINNIPPVTLATLALNIWLF-LNPLKSLYNS---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS H DD HLY+NM S++ KG LER GS F ++ + T
Sbjct: 57 EKCYQQKDWQRLLLSPFHHADDWHLYFNMASMLWKGINLERRLGSKWFAYIIITFSLLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y+ L + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLFLEFALAEFMDEPDFRRNCAVGFSGVLFALKVLNNHYCPGGFVNVLGFPVPNKFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W ELV IH + P SF GHL+GILVGL YT L +++E
Sbjct: 177 WAELVAIHFISPGTSFAGHLAGILVGLMYTHGPLKKIME 215
>gi|148237462|ref|NP_001087563.1| rhomboid domain containing 1 [Xenopus laevis]
gi|51258484|gb|AAH80107.1| MGC84665 protein [Xenopus laevis]
Length = 306
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 120/221 (54%), Gaps = 4/221 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LL Q+ G H IPP TL + + L+ +N L L +CIS
Sbjct: 1 MQRRQRGINAGLVLLFAQLYQFGIHNIPPVTLAALGLNIYLF-LNPLK---PLLKVCISV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
RD++R +LS H DD HLY+NMVSL+ KG +LER G+ F ++
Sbjct: 57 REGYYGRDWQRFLLSPFHHADDWHLYFNMVSLLWKGAKLERRLGTGLFASIILVFSQLIG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V YV+L YV+ D + QCA+GFS VLF++K + P + + +P YA
Sbjct: 117 VVYVILEYVLAEFTGDPSFKMQCAVGFSGVLFALKVLNNHYHPGGSSNVFGILIPNKYAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERS 221
W ELV IHL+ P SF GHLSGILVGL YT+ L ++ S
Sbjct: 177 WAELVAIHLLSPGTSFVGHLSGILVGLLYTQGPLKNILTAS 217
>gi|444730882|gb|ELW71255.1| Rhomboid domain-containing protein 1 [Tupaia chinensis]
Length = 278
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 122/219 (55%), Gaps = 4/219 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LL Q+ VG + IPP TL + + + + +N L + C+S
Sbjct: 1 MQRRSRGINTGLILLFSQICHVGINNIPPVTLATLAL-NIWFFLNPLK---PLIYSCLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H DD HLY+NM S++ KG LER GS +F ++S + T
Sbjct: 57 EKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGVHLERRLGSRRFAYVISTFSLLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLLLQFAVAEFMDEPDYRKSCAVGFSGVLFALKVLNNHYFPGGFVNVLGFPVPNKFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W ELV IH P SF GHL+GILVGL YT+ L +++E
Sbjct: 177 WAELVAIHFFSPGTSFAGHLAGILVGLMYTQGPLKKILE 215
>gi|197097614|ref|NP_001125444.1| rhomboid-related protein 4 [Pongo abelii]
gi|75042072|sp|Q5RBS4.1|RHBL4_PONAB RecName: Full=Rhomboid-related protein 4; Short=RRP4; AltName:
Full=Rhomboid domain-containing protein 1; AltName:
Full=Rhomboid-like protein 4
gi|55728068|emb|CAH90786.1| hypothetical protein [Pongo abelii]
Length = 318
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 122/219 (55%), Gaps = 4/219 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LLL Q+ VG + IPP TL + + + + +N + S C+S
Sbjct: 1 MQRRSRGINTGLILLLSQIFHVGINNIPPVTLATLAL-NIWFFLNPQKPLYSS---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
QRD++RL+LS L H DD HLY+N S++ KG LER GS F +++ + T
Sbjct: 57 EKCYQQRDWQRLLLSPLHHADDWHLYFNTASVLWKGINLERRLGSRWFAYVITTFSVLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLLLQFAVAEFMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILGFPVPNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W+ELV IHL P SF GH +GILVGL YT+ L +++E
Sbjct: 177 WVELVAIHLFSPGTSFAGHQAGILVGLMYTQGPLKKIME 215
>gi|387018080|gb|AFJ51158.1| Rhomboid domain-containing protein 1-like [Crotalus adamanteus]
Length = 310
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 123/214 (57%), Gaps = 4/214 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G+L LL Q+ VGFH IPP TL + + ++ + +P D CIS
Sbjct: 1 MQRRHKGLNTGVLFLLSQLYQVGFHNIPPVTLGTLAVNIFFFLQPL--KPLDK--ACISV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
+ L ++D+ RL LSA H DD HLY+NMVSL+ KG +LE G++ F +++ +
Sbjct: 57 NYCLYKKDWHRLYLSAFHHADDWHLYFNMVSLLWKGIKLESRLGTMWFGYIIALFSLLVG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
Y+ L V+ + + + + CA+GFS VLF++K + P + ++ +V Y+
Sbjct: 117 AVYIFLEAVLAELLGNPSYEHHCAVGFSGVLFALKVLNNYYHPGGSTNIMGLNVSNKYSC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSL 214
W+EL+ IHL+ P +SF GHL+GILVGL YT L
Sbjct: 177 WLELLAIHLLNPQSSFAGHLAGILVGLMYTMGPL 210
>gi|427785133|gb|JAA58018.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 450
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/216 (40%), Positives = 128/216 (59%), Gaps = 10/216 (4%)
Query: 1 MARRFFRRELGILLLLYQVL-SVGFHLIPPGTLTLILIQTLLYIMNVLAQPW-DSLGICI 58
M RR R +G++LLL VL VG IPP TL ++L Q + + + PW D G CI
Sbjct: 1 MQRRHQRDAMGVMLLLNHVLFQVGLEAIPPVTLFIVLAQACTF-LQLFEVPWRDISGACI 59
Query: 59 SAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIIS 118
S + ++ ++ + R+ A+EHGD +HLYYNMVS I KG LE + G QF ++ ++
Sbjct: 60 SVNAVIFKKQWLRIFYGAIEHGDSLHLYYNMVSFIWKGMLLEPVLGGAQFAYII---VLF 116
Query: 119 TSVCYVMLSYVIYLMNH--DVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSV-- 174
T++C ++L + YL+ D YQCA+GFS V+F++K + P + + L +
Sbjct: 117 TALCGIVLLGLNYLLGTFVDSAFYYQCAVGFSGVIFALKVLNNYYFPGRSRRFLGIDIDL 176
Query: 175 PAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYT 210
PA W+ELV+I L+ PNAS GHL+GILVGL Y
Sbjct: 177 PAGQVVWLELVLIQLVTPNASLVGHLAGILVGLAYV 212
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 45 NVLAQPWDSL--GICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERM 102
+++ + W + C+++ +++ +K L + AL +HL Y ++SL+ G LE
Sbjct: 272 DIMPRHWKRMVDAPCLASSLVIDHHQWKLLFIPALHTSGSLHLAYTVLSLLGLGYYLEHR 331
Query: 103 FGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNH-DVTEL------YQCAIGFSAVLFSMK 155
G +F+ + L + T++ + +++Y I L NH +V + Y+C +G +A L +MK
Sbjct: 332 MGIFRFLGTLLTLTVLTNIAFCLVTYYI-LPNHMEVAGVRAFQIRYKCFLGLTATLIAMK 390
Query: 156 TIRTRQSPDVTH--QLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYTETS 213
I T P + L VP + E ++H +P+ G+ G + S
Sbjct: 391 GIYTAYYPTGPYLFLFLPVPVPKLLGVIFEFALLHFALPHVWIVGNAIGFFAAFMFVILS 450
>gi|327267037|ref|XP_003218309.1| PREDICTED: rhomboid domain-containing protein 1-like [Anolis
carolinensis]
Length = 317
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 133/256 (51%), Gaps = 17/256 (6%)
Query: 11 GILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLG-ICISAHTILNQRDY 69
G+LLL Q+ VG + IPP T + + L++ QP L +CIS +RD+
Sbjct: 14 GLLLLFGQIYQVGLNNIPPITFATLAVNIYLFL-----QPLKPLEEVCISVSEGFYRRDW 68
Query: 70 KRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYV 129
RL LSA H DD HLY+NMVSL+ KG +LER GS+ F +++ + + Y++L +
Sbjct: 69 HRLYLSAFHHADDWHLYFNMVSLLWKGIKLERRLGSMWFGYIITLFSVLVGIVYMILEFT 128
Query: 130 IYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHL 189
+ + + + + CA+GFS VLF++K + P + L+ V YA W+EL+ IHL
Sbjct: 129 LAELLENPSFIQSCAVGFSGVLFALKVLNNYYHPGGSSSLMGIYVSNKYACWVELIAIHL 188
Query: 190 MVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRVVNTLTNVFKLDDDCNGDDEDS 249
+ P +SF GHL+GILVGL YT L +++ VF + N D
Sbjct: 189 LSPGSSFAGHLAGILVGLMYTMGPLKTIMKACAGGF-----IFPTVFSQQRNNNNPDYRY 243
Query: 250 DTSASFLDFTDNTKND 265
AS NT+ D
Sbjct: 244 SGYAS------NTQRD 253
>gi|156351056|ref|XP_001622342.1| predicted protein [Nematostella vectensis]
gi|156208856|gb|EDO30242.1| predicted protein [Nematostella vectensis]
Length = 321
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 123/215 (57%), Gaps = 3/215 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR R LGI LLL Q+ + GF+ IPP TL+ I +Y+ + C+SA
Sbjct: 1 MQRRG-RGGLGIFLLLAQLYNFGFNRIPPVTLSFIAGNAAIYLRLLPNL-PRLRDACVSA 58
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
+ + D+ RL L+ H DD HLYYNM S + KG+ LE GS F+ L++ + TS
Sbjct: 59 NHVWYYGDWLRLALAPFFHLDDWHLYYNMASFLWKGKSLETKLGSGMFLYLLAVFSVLTS 118
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYA 179
V V L + + D + LY CA GFS V+F++K + T + P ++ F +P YA
Sbjct: 119 VVLVGLDIFLANVTGDSSYLYSCAAGFSGVIFALKVLTTYELPSGVSMVMGMFPIPVRYA 178
Query: 180 PWIELVIIHLMVPNASFKGHLSGILVGLCYTETSL 214
W EL++I LMVPNASF GHL+GI+VGL Y + L
Sbjct: 179 CWAELILIQLMVPNASFTGHLAGIIVGLLYVKGPL 213
>gi|440910625|gb|ELR60400.1| Rhomboid domain-containing protein 1 [Bos grunniens mutus]
Length = 322
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 133/253 (52%), Gaps = 15/253 (5%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR +G+LLLL Q+ VG + +PP TL + + + + +N L L C+S
Sbjct: 1 MHRRSRGVNIGLLLLLSQIFQVGINNVPPVTLATLAL-NIWFFLNPLK---PLLSSCLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H DD HLY+NMVS++ KG LER GS F ++ + T
Sbjct: 57 EKCYYQKDWQRLLLSPLHHADDWHLYFNMVSMLWKGIHLERRLGSRWFAYIIVTFSLLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y+ L + + ++ CA+GFS VLF++K + P +L F V +A
Sbjct: 117 VVYLFLEFALAEFLNEPDFKRNCAVGFSGVLFALKVLNNHCCPGGFVNVLGFPVSNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRVVNTLTNVFKLDD 240
W+EL+ IH + P SF GHL+GILVGL YT L +++E + T +F +
Sbjct: 177 WVELLAIHFISPGTSFAGHLAGILVGLMYTHGPLKKIME-----------SCTGIFPSNS 225
Query: 241 DCNGDDEDSDTSA 253
D G ++S
Sbjct: 226 DYPGQQYYFNSSG 238
>gi|62955205|ref|NP_001017614.1| rhomboid domain-containing protein 1 [Danio rerio]
gi|62204835|gb|AAH92835.1| Zgc:110266 [Danio rerio]
Length = 335
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 117/220 (53%), Gaps = 6/220 (2%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSL-GICIS 59
M R LG+LLL QV +G IPP TL + + L++ P+ L C+S
Sbjct: 1 MRNRQRGTNLGLLLLASQVFQLGIDNIPPVTLATLGLNVYLFLF-----PFKPLLETCLS 55
Query: 60 AHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIIST 119
RD+ RL+LS H DDMHLY+NM L+ KG LE+ G F L+S + T
Sbjct: 56 VREAYWYRDWSRLLLSPFHHVDDMHLYFNMALLLWKGIRLEKKLGGPWFAYLLSVFSLLT 115
Query: 120 SVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYA 179
Y++L + M D + QCA+GFS VLF +K + P ++ + YA
Sbjct: 116 GFVYLLLETGLTHMTEDSSYSLQCAVGFSGVLFGLKVVNNHYHPGGATNIMGLPIANRYA 175
Query: 180 PWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W+ELV+IH+M P SF GHLSGILVGL YT L RL+E
Sbjct: 176 CWVELVLIHIMNPGTSFVGHLSGILVGLLYTTGPLKRLME 215
>gi|146231840|gb|ABQ12995.1| rhomboid domain containing 1 [Bos taurus]
Length = 322
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 123/219 (56%), Gaps = 4/219 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR +G+LLLL Q+ VG + +PP TL + + + + +N L L C+S
Sbjct: 1 MHRRSRGVNIGLLLLLSQIFQVGINNVPPVTLATLAL-NIWFFLNPLK---PLLSSCLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H DD HLY+NMVS++ KG LER GS F ++ + T
Sbjct: 57 EKCYYQKDWQRLLLSPLHHADDWHLYFNMVSMLWKGIHLERRLGSRWFAYIIVTFSLLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y+ L + + ++ CA+GFS VLF++K + P +L F V +A
Sbjct: 117 VVYLFLEFALAEFLNEPDFKRNCAVGFSGVLFALKVLNNHCCPGGFVNVLGFPVSNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W+EL+ IH + P SF GHL+GILVGL YT L +++E
Sbjct: 177 WVELLAIHFISPGTSFAGHLAGILVGLMYTHGPLKKIME 215
>gi|334347379|ref|XP_001373833.2| PREDICTED: rhomboid domain-containing protein 1-like [Monodelphis
domestica]
Length = 336
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 120/219 (54%), Gaps = 4/219 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR +G+LLL Q+ +G IPP TL + + L++ + W +C+S
Sbjct: 1 MQRRSREIPVGVLLLASQMFQIGITNIPPVTLACLALNVWLFLSPLKPFHW----VCLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
+ ++D++RL+LS H DD HLY+NM SL+ KG LER GS F ++S I
Sbjct: 57 ESCYEKKDWQRLLLSPFHHVDDWHLYFNMASLLWKGLTLERRLGSFWFAYVISVFSILIG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y+ L Y + + C IGFS VLF++K + +P ++ +P YA
Sbjct: 117 VIYLALEYSLAELLDQPEYKMHCTIGFSGVLFALKVLNNNYNPGGHTNIMGLYIPNKYAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W+EL++IHL+ P SF GHL+GI+VGL Y L R+++
Sbjct: 177 WMELLMIHLLTPKTSFAGHLAGIIVGLLYVLGPLKRIMK 215
>gi|426221661|ref|XP_004005027.1| PREDICTED: rhomboid-related protein 4 [Ovis aries]
Length = 322
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 122/219 (55%), Gaps = 4/219 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR +G+LLLL Q+ VG + +PP TL + + + + +N L L C+S
Sbjct: 1 MHRRSRGVNIGLLLLLSQIFQVGINNVPPVTLATLAL-NIWFFLNPLK---PLLSSCLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS + H DD HLY+NM S++ KG LER GS F ++ + T
Sbjct: 57 EKCYQQKDWQRLLLSPIHHADDWHLYFNMASMLWKGIHLERRLGSRWFAYIIVTFSLLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y+ L + + ++ CAIGFS VLF++K + P +L F V +A
Sbjct: 117 VVYLFLEFALAEFLNEPDFKRNCAIGFSGVLFALKVLNNHCCPGGFVNVLGFPVSNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W+EL+ IH + P SF GHL+GILVGL YT L +++E
Sbjct: 177 WVELLAIHFISPGTSFAGHLAGILVGLMYTHGPLKKIME 215
>gi|296490188|tpg|DAA32301.1| TPA: rhomboid domain-containing protein 1 [Bos taurus]
Length = 268
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 123/219 (56%), Gaps = 4/219 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR +G+LLLL Q+ VG + +PP TL + + + + +N L L C+S
Sbjct: 1 MHRRSRGVNIGLLLLLSQIFQVGINNVPPVTLATLALN-IWFFLNPLK---PLLSSCLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H DD HLY+NMVS++ KG LER GS F ++ + T
Sbjct: 57 EKCYYQKDWQRLLLSPLHHADDWHLYFNMVSMLWKGIHLERRLGSRWFAYIIVTFSLLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y+ L + + ++ CA+GFS VLF++K + P +L F V +A
Sbjct: 117 VVYLFLEFALAEFLNEPDFKRNCAVGFSGVLFALKVLNNHCCPGGFVNVLGFPVSNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W+EL+ IH + P SF GHL+GILVGL YT L +++E
Sbjct: 177 WVELLAIHFISPGTSFAGHLAGILVGLMYTHGPLKKIME 215
>gi|118151086|ref|NP_001071463.1| rhomboid domain-containing protein 1 [Bos taurus]
gi|115304921|gb|AAI23778.1| Rhomboid domain containing 1 [Bos taurus]
Length = 267
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 123/219 (56%), Gaps = 4/219 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR +G+LLLL Q+ VG + +PP TL + + + + +N L L C+S
Sbjct: 1 MHRRSRGVNIGLLLLLSQIFQVGINNVPPVTLATLALN-IWFFLNPLK---PLLSSCLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H DD HLY+NMVS++ KG LER GS F ++ + T
Sbjct: 57 EKCYYQKDWQRLLLSPLHHADDWHLYFNMVSMLWKGIHLERRLGSRWFAYIIVTFSLLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y+ L + + ++ CA+GFS VLF++K + P +L F V +A
Sbjct: 117 VVYLFLEFALAEFLNEPDFKRNCAVGFSGVLFALKVLNNHCCPGGFVNVLGFPVSNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W+EL+ IH + P SF GHL+GILVGL YT L +++E
Sbjct: 177 WVELLAIHFISPGTSFAGHLAGILVGLMYTHGPLKKIME 215
>gi|395823332|ref|XP_003784941.1| PREDICTED: rhomboid domain-containing protein 1 [Otolemur
garnettii]
Length = 316
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/219 (40%), Positives = 126/219 (57%), Gaps = 4/219 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G+LLLL QV+ VG + IPP TL + + + L+ +N L +S C+S
Sbjct: 1 MQRRSRGIHSGLLLLLSQVIHVGINNIPPVTLATLALNSWLF-LNPLKPLHNS---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
RD++RL+LS L H DD HLY+NMVS++ KG LER GS F +++ + T
Sbjct: 57 EKCYEHRDWQRLLLSPLHHADDWHLYFNMVSMLWKGINLERRLGSRWFACVIATFSLLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
+ Y++L + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 LVYLLLQFALAEFMREPELRRSCAVGFSGVLFALKVLNNHYFPGGFVNVLGFPVPNRFAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W ELV IHL P SF GHL+GILVGL YT+ L +++E
Sbjct: 177 WAELVAIHLFSPGTSFAGHLAGILVGLMYTQGPLKKIME 215
>gi|348577789|ref|XP_003474666.1| PREDICTED: rhomboid domain-containing protein 1-like [Cavia
porcellus]
Length = 309
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 122/225 (54%), Gaps = 4/225 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G+LLL Q+ VG IPP TL + + L+ +N L +P S C+S
Sbjct: 1 MHRRSRGINTGLLLLFSQIFHVGVSNIPPVTLATLAVNIWLF-LNPL-KPLQS--SCLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H DD HLY+NMVS++ KG LER GS F +++ ++ T
Sbjct: 57 EKCYQQKDWQRLLLSPLHHADDWHLYFNMVSMLWKGINLERRLGSRWFAYVLATFVLFTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L + CA+GFS VLF++K + P +L VP A
Sbjct: 117 VVYLLLQVACAEFMDEPDFRRNCAVGFSGVLFALKVLNNHYCPGGFVNILGCPVPNKLAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSV 225
W EL+ IH + P SF GHL+GILVGL YT L +++E +V
Sbjct: 177 WAELLAIHFLSPGTSFAGHLAGILVGLMYTRGPLKKIMETCADTV 221
>gi|291235069|ref|XP_002737468.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 414
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 124/208 (59%), Gaps = 3/208 (1%)
Query: 10 LGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDY 69
LGILLL QV+ VG IPP TL ++ T++Y + +L P +C+SA + +Q ++
Sbjct: 18 LGILLLAIQVMRVGLDNIPPVTLASLVANTVIY-LRILQVP-SIQTVCVSAVKVWHQHEW 75
Query: 70 KRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYV 129
RL+L++ H DMHLY+NM S + KG LER GS F +++ + TS V L +
Sbjct: 76 SRLLLASWFHTSDMHLYFNMASFLWKGMSLERKLGSKYFAYMIAVFSVLTSSLLVCLDIL 135
Query: 130 IYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNF-SVPAVYAPWIELVIIH 188
+ D + LY CA+GFSAV+FS+K + T T ++ V + A W+ELV+I
Sbjct: 136 ASEVFGDASYLYSCAVGFSAVIFSIKMVTTYSMAPGTQWIMGLIPVHSRIACWVELVLIQ 195
Query: 189 LMVPNASFKGHLSGILVGLCYTETSLGR 216
++VPN SF GHL+GILVGL Y + L R
Sbjct: 196 VLVPNVSFTGHLAGILVGLAYVKGPLKR 223
>gi|432103473|gb|ELK30578.1| Rhomboid domain-containing protein 1 [Myotis davidii]
Length = 313
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 120/219 (54%), Gaps = 4/219 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LLL Q+ VG + IPP TL + + + + ++ L + S C+S
Sbjct: 1 MQRRPRGLNAGLILLLSQIFHVGINNIPPVTLATLAV-NIWFFLSPLKPVYSS---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
++D++RL+LS H DD HLY+NMVS++ KG LER GS F +++ + T
Sbjct: 57 EKCYQEKDWQRLLLSPFHHADDWHLYFNMVSMLWKGIHLERRLGSRWFAYVITTFSLLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y+ L + + CA+GFS VLF +K + P +L F VP ++
Sbjct: 117 VVYLFLEFAFAECMGEPDFKRSCAVGFSGVLFGLKVLNNHYFPGGFVNVLGFPVPHKFSC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W ELV IHL+ P SF GHL+GILVGL Y L +++E
Sbjct: 177 WAELVAIHLITPGTSFAGHLAGILVGLMYIHGPLKKIME 215
>gi|198416524|ref|XP_002119628.1| PREDICTED: similar to rhomboid domain containing 1 [Ciona
intestinalis]
Length = 333
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 132/231 (57%), Gaps = 13/231 (5%)
Query: 12 ILLLLYQVLSVGFHLIPPGTLTLILIQT---LLYIMNVLAQPWD-SLGICISAHTILNQR 67
++LLL Q+ GF IPP TL I + L ++ L P+ L +C + +R
Sbjct: 18 LMLLLIQLCQAGFDNIPPVTLGTIALNVGVFLGFVHKFLNLPFPHPLQVCAGVAQVWKRR 77
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM-- 125
DY R+V + HG D HLYYNM+S + KGR LER GS +F+ +++ + S V YVM
Sbjct: 78 DYWRIVEATFHHGGDWHLYYNMISFLWKGRSLERKIGSKRFLYMIA--VFSVLVNYVMLW 135
Query: 126 LSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNF-SVPAVYAPWIEL 184
L+Y + D + + QCAIGFS V+F++K + T+ T LL F V + + W EL
Sbjct: 136 LNYGAANVFRDGSYINQCAIGFSGVVFAVKVVTTQLMEPGTVLLLGFIPVNSRLSCWFEL 195
Query: 185 VIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERS----GRSVSRVVNT 231
++I ++VPNASF GHL+GILVGL Y + L R++E GRS R V
Sbjct: 196 ILIQVLVPNASFTGHLAGILVGLAYVKGPLKRIMEWPLLVFGRSNRRYVGP 246
>gi|196000606|ref|XP_002110171.1| hypothetical protein TRIADDRAFT_53891 [Trichoplax adhaerens]
gi|190588295|gb|EDV28337.1| hypothetical protein TRIADDRAFT_53891 [Trichoplax adhaerens]
Length = 348
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 124/202 (61%), Gaps = 6/202 (2%)
Query: 22 VGFHLIPPGTLTLILIQTLLYIMNVLAQ---PWDSLGICISAHTILNQRDYKRLVLSALE 78
VG IPP TL I + ++L+ MN+L P S +CIS ++ +++RL+L A
Sbjct: 22 VGLDRIPPITLATIGLNSILF-MNLLPDYRLPHLS-EVCISVKSVWYMNEWQRLILGAFF 79
Query: 79 HGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVT 138
H DMHLYYNMVS + KG LE+ +GS+ F+ ++ T+V V +SY I +
Sbjct: 80 HASDMHLYYNMVSFLWKGIHLEKKYGSLHFLSMIISFTALTNVTLVAISYAIGHHTDKLH 139
Query: 139 ELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNF-SVPAVYAPWIELVIIHLMVPNASFK 197
CA+GFS V+F++K + T SP T+ ++N + + YA W ELV+I ++VPN+SF
Sbjct: 140 YFTDCAVGFSGVIFALKVVATYVSPPSTNYIMNLIPISSRYACWAELVLIQVLVPNSSFL 199
Query: 198 GHLSGILVGLCYTETSLGRLVE 219
GHL+GILVGL Y +T +G +++
Sbjct: 200 GHLAGILVGLAYVKTPIGSILD 221
>gi|62858293|ref|NP_001016449.1| rhomboid domain containing 1 [Xenopus (Silurana) tropicalis]
gi|89272850|emb|CAJ82135.1| novel protein containing rhomboid domain [Xenopus (Silurana)
tropicalis]
Length = 308
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 23 GFHLIPPGTLTLILIQTLLYIMNVLAQPWDSL-GICISAHTILNQRDYKRLVLSALEHGD 81
G H IPP TL + + L++ P+ L +CIS RD++R +LS H D
Sbjct: 23 GVHNIPPVTLAALGLNIFLFL-----NPFKPLLEVCISVRDGYYGRDWQRFLLSPFHHAD 77
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
D HLY+NMVSL+ KG +LER GS F ++ V YV+L Y + D +
Sbjct: 78 DWHLYFNMVSLLWKGAKLERKLGSGLFATIIIVFSQLIGVVYVILEYGLAEFTGDPSYKM 137
Query: 142 QCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLS 201
QCA+GFS VLF++K + P + + +P YA W ELV IHL+ P SF GHLS
Sbjct: 138 QCAVGFSGVLFALKVLNNYYHPGGSSNVFGILIPNKYACWAELVAIHLLSPGTSFVGHLS 197
Query: 202 GILVGLCYTETSLGRLV 218
GILVGL YT+ L +++
Sbjct: 198 GILVGLLYTQGPLKKIL 214
>gi|242001818|ref|XP_002435552.1| hypothetical protein IscW_ISCW006085 [Ixodes scapularis]
gi|215498888|gb|EEC08382.1| hypothetical protein IscW_ISCW006085 [Ixodes scapularis]
Length = 453
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 125/215 (58%), Gaps = 6/215 (2%)
Query: 1 MARRFFRRELGILLLLYQVL-SVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLG-ICI 58
M RR R +G+LLLL V+ +G +IPP TL +++ Q + + ++ PW S CI
Sbjct: 1 MRRRQQRDTMGVLLLLNHVVYQIGLDVIPPVTLAIVVAQACTF-LGLVDLPWRSPAEACI 59
Query: 59 SAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIIS 118
S ++ + + R++ +A EHGD HLYYNMVS I KG +E GS F+ +V
Sbjct: 60 SVDKVVFRGQWWRILFAAFEHGDSFHLYYNMVSFIWKGIRMETELGSAYFLYIVCLFTGL 119
Query: 119 TSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSV--PA 176
T V V LSY+ + + YQCA+GFSAV+F++K + P ++ ++ SV P+
Sbjct: 120 TGVTLVGLSYLCGMFVNPSFN-YQCAVGFSAVIFALKVLNNHYWPGISPTIMGMSVSMPS 178
Query: 177 VYAPWIELVIIHLMVPNASFKGHLSGILVGLCYTE 211
W ELV+I L+ PNASF GHL+GILVGL Y
Sbjct: 179 GLIVWAELVLIQLVTPNASFLGHLAGILVGLAYVH 213
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 86/162 (53%), Gaps = 8/162 (4%)
Query: 57 CISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLI 116
C++++ +L Q +++L++ AL + MHL Y +VSL+ G LER G+VQF +
Sbjct: 285 CVNSYLVLKQERWEQLLVPALHTYNSMHLLYTVVSLLGLGFYLERRLGTVQFALTTLAAT 344
Query: 117 ISTSVCYVMLSYVIYLMNHDVTEL------YQCAIGFSAVLFSMKTIRTRQSPDVTHQL- 169
++T++ Y ++++ + ++ + Y+C +G + L ++K I + P + L
Sbjct: 345 VATNLAYCLMTHFVLPYAKEIDGIPHFEMEYKCFLGMTGALMALKVIYSYYYPYAGYLLF 404
Query: 170 -LNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYT 210
+ VP +E+ ++H ++P+ G++ G VG+ Y
Sbjct: 405 FIEVPVPKFIGLVLEIALLHFLLPHVWIVGNVVGFAVGIVYV 446
>gi|115620361|ref|XP_780455.2| PREDICTED: rhomboid domain-containing protein 1-like
[Strongylocentrotus purpuratus]
Length = 349
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 120/206 (58%), Gaps = 9/206 (4%)
Query: 22 VGFHLIPPGTLTLILIQTLLY-------IMNVLAQPWDSLGICISAHTILNQRDYKRLVL 74
VGF IPP TL I+ L+Y I V+ P IC+S+ + + D+ RL L
Sbjct: 27 VGFDRIPPVTLATIVANVLIYLRVLNPYIKTVIRSP-SIQNICVSSAHVWYKGDWPRLFL 85
Query: 75 SALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMN 134
+A H DD HLY+NMVS + KG LER FGS F L+ T+ V L+ + +
Sbjct: 86 AAWFHLDDFHLYFNMVSFVWKGISLERKFGSPYFAYLIVVFCFLTNGLLVALNVGLAELL 145
Query: 135 HDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPN 193
D + + CA GFS VLF++K + T +P + +++ FSVP+ +A W+ELV+I L+VP
Sbjct: 146 EDSSHIVSCAAGFSGVLFALKVLTTTYTPVQSQRIMGLFSVPSRWACWVELVLIQLIVPR 205
Query: 194 ASFKGHLSGILVGLCYTETSLGRLVE 219
ASF GHL+GILVGL Y + L L++
Sbjct: 206 ASFTGHLAGILVGLAYVKGPLKLLMD 231
>gi|351715240|gb|EHB18159.1| Rhomboid domain-containing protein 1 [Heterocephalus glaber]
Length = 315
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 117/219 (53%), Gaps = 4/219 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G+LLL Q+ VG + IPP TL + + L+ + L + S C+S
Sbjct: 1 MQRRSRGINTGLLLLFSQIFHVGINNIPPVTLATLAVNIWLF-LTPLKPLYHS---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H DD HLY+NM S++ KG LER GS F +++ + T
Sbjct: 57 EKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYVLTTFSLLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L + CA+GFS VLF++K + P +L F VP A
Sbjct: 117 VVYLLLQVACAEFMDEPDFRRNCAVGFSGVLFALKVLSNHYCPGGFVNVLGFPVPNRLAC 176
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
W EL+ IH P SF GHL+GILVGL YT L +++E
Sbjct: 177 WAELLAIHFFSPGTSFAGHLAGILVGLMYTHGPLKKIME 215
>gi|355716387|gb|AES05595.1| rhomboid domain containing 1 [Mustela putorius furo]
Length = 294
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 132/256 (51%), Gaps = 11/256 (4%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR G++LLL Q+ VG IPP TL L+ + + +N L ++S C+S
Sbjct: 1 MQRRSRGINAGLILLLSQIFHVGISNIPPVTLA-TLVLNIWFFLNPLKPLFES---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H DD HLY+NM S++ KG LER GS F ++ + T
Sbjct: 57 EKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGIHLERRLGSRWFAYVIVTFSLLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYA- 179
V Y+ L + + + CA+GFS VLF++K + P +L F VP A
Sbjct: 117 VLYLFLEFALAEFLDEPDFRRNCAVGFSGVLFALKVLNNHYCPGGFANILGFPVPNRLAC 176
Query: 180 -P-----WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRVVNTLT 233
P W EL+ IH + P SF GHL+GILVGL YT L +++++ S ++
Sbjct: 177 VPNRLACWAELLAIHFLSPGTSFAGHLAGILVGLMYTHGPLKKIMKKCAGIFSSNMHYPG 236
Query: 234 NVFKLDDDCNGDDEDS 249
+ +++ +DS
Sbjct: 237 QQYHVNNSGYSRYQDS 252
>gi|449670102|ref|XP_002160201.2| PREDICTED: rhomboid-related protein 4-like [Hydra magnipapillata]
Length = 369
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/225 (40%), Positives = 136/225 (60%), Gaps = 14/225 (6%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYI-----MNVLAQPWDSLG 55
M+RR R LG+LLL QVL +G IPP TL +++ +++ M+ + +
Sbjct: 2 MSRRQTRGGLGLLLLGSQVLQIGVDQIPPITLATLVLNVAVFLQLFPFMSTVEK------ 55
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFL 115
C S + ++ ++ RL+ S+ H DDMHLY+NMVS I KGR LER Q++VL++
Sbjct: 56 ACTSNFNVFHKGEWPRLIYSSFYHLDDMHLYFNMVSFIWKGRNLERRMKRSQYLVLLALF 115
Query: 116 IISTSVCYVMLSYVI-YLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSV 174
+ T V ++L+ ++ ++ +DV L+ CA GFSAV+F++K + T S D ++ V
Sbjct: 116 SVLTQVVMLLLNSILSFIFTNDVY-LHSCAAGFSAVIFALKVLTTHNSIDY-ETVMGIVV 173
Query: 175 PAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
P+ YA W ELV+I +MVPN SF GHL+GILVGL Y L +V+
Sbjct: 174 PSRYACWAELVLIQIMVPNVSFTGHLAGILVGLMYIFGPLKWIVK 218
>gi|449509605|ref|XP_002194576.2| PREDICTED: rhomboid-related protein 4 [Taeniopygia guttata]
Length = 314
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 128/227 (56%), Gaps = 6/227 (2%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLG-ICIS 59
M RR G+LLLLYQ+ VG IP TL ++++ L++ P L C+S
Sbjct: 1 MERRQRGISAGLLLLLYQISQVGLQNIPSVTLGVLVLNIFLFL-----NPLRPLSEACLS 55
Query: 60 AHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIIST 119
+ + +++++RL+L+ H DD HLYYNM+S++ KG LER S+ F +++ +
Sbjct: 56 VNEAVYRKNWQRLLLAPFHHADDWHLYYNMISMLWKGIMLERKLKSIWFAYIIAVFSVLI 115
Query: 120 SVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYA 179
+ Y++L ++ ++ D + C +GFS VLF++K + +P +L + + YA
Sbjct: 116 GIVYMVLELLLVIILDDPSYEMNCGVGFSGVLFALKVLNNHYNPGRVSSVLGLPISSKYA 175
Query: 180 PWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVS 226
W+EL+ IH + P SF GHLSGILVGL YT L ++++ +S
Sbjct: 176 CWVELLAIHFISPGTSFAGHLSGILVGLMYTMGPLKKIMQACAAGIS 222
>gi|325180697|emb|CCA15102.1| serine protease family S54 putative [Albugo laibachii Nc14]
Length = 295
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 139/223 (62%), Gaps = 11/223 (4%)
Query: 4 RFFRRELGILLLLYQVLSVGFHL--IPPGTLTLILIQTLLY--IMNVLA--QPWDSLGIC 57
R +R+ LL+LY ++ + PP T++LI++ + L+ I ++ A P +S +C
Sbjct: 8 RHGQRDKRNLLVLYMLIQKIMQMDRKPPLTISLIVLMSNLHFRIFDIGATLSP-ESYMLC 66
Query: 58 ISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLII 117
+ I+ + +++RL+ SA HGDD+HLY+NMVS + KG +LE GS F L+ +L++
Sbjct: 67 --PNLIVRRHEWERLIGSAFFHGDDIHLYHNMVSFLWKGYQLESKMGSYHFACLLIYLLL 124
Query: 118 STSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAV 177
+ V+ SY+I+ + H+ QC++GFSAVLF +K + +SP+ T + F VP
Sbjct: 125 VSHGLIVLASYLIFKLQHNPHAWTQCSLGFSAVLFGLKVVLNSKSPN-TSNIYGFQVPTK 183
Query: 178 YAPWIELVIIHLMVPNASFKGHLSGILVGLCY-TETSLGRLVE 219
YA W+ELV+IH++VP+ASF GHL GI+ G + + ++G+ E
Sbjct: 184 YAAWLELVLIHVLVPDASFLGHLCGIVAGYSWISHAAIGKKGE 226
>gi|213512430|ref|NP_001133781.1| Rhomboid domain-containing protein 1 [Salmo salar]
gi|209155312|gb|ACI33888.1| Rhomboid domain-containing protein 1 [Salmo salar]
gi|209734730|gb|ACI68234.1| Rhomboid domain-containing protein 1 [Salmo salar]
Length = 313
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 110/197 (55%), Gaps = 4/197 (2%)
Query: 18 QVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSAL 77
QV VG IPP TL ++ + L+++ L L CIS + D++RLVLS L
Sbjct: 19 QVFQVGVENIPPVTLAVLGLNVYLFLVPNLPL----LQACISVQQAYWRGDWRRLVLSPL 74
Query: 78 EHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDV 137
H DD HLY+NM S + KG +LE GS + L++ + T V Y++L V+ + D
Sbjct: 75 HHLDDWHLYFNMASFLWKGVKLEPRLGSSFYAWLLAVFSLLTGVIYLLLEMVLSEITQDP 134
Query: 138 TELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFK 197
+ QCA+GFS VLF++K + P ++ V YA W+ELV+IHL P SF
Sbjct: 135 SYSMQCAVGFSGVLFALKVLSNHYHPGGVSYVMGVPVANRYASWVELVLIHLTSPGTSFV 194
Query: 198 GHLSGILVGLCYTETSL 214
GHL+GILVGL YT L
Sbjct: 195 GHLAGILVGLLYTAGPL 211
>gi|391331176|ref|XP_003740026.1| PREDICTED: rhomboid domain-containing protein 1-like [Metaseiulus
occidentalis]
Length = 471
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 127/215 (59%), Gaps = 8/215 (3%)
Query: 1 MARRFFRRELGILLLLYQVL-SVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLG-ICI 58
M RR R G+LLL+ +L +VG IPP TL I +Q L+ + ++ PW S+ CI
Sbjct: 1 MMRRN-RDNFGVLLLVQHLLFTVGLENIPPVTLGTIGLQVCLF-LGLIKVPWRSIEECCI 58
Query: 59 SAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIIS 118
SA+T++ +R++ R+ SALEH D HLYYNM S + KG LE + G+ F L+ I
Sbjct: 59 SAYTLIERREFMRIFSSALEHSDSYHLYYNMASFVWKGIILESVMGAPFFAYLLVVFTIL 118
Query: 119 TSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLL---NFSVP 175
++ V ++Y + ++ + CAIGFS V+F++K + + PDV H ++ N VP
Sbjct: 119 VALVSVSINYALAILFSSFDFMSSCAIGFSGVIFALKVVVNKVYPDV-HPVIGGYNLRVP 177
Query: 176 AVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYT 210
W+EL +I L VP ASF GHL+GILVG Y+
Sbjct: 178 GGMYVWLELALISLFVPRASFVGHLAGILVGTAYS 212
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 84/165 (50%), Gaps = 9/165 (5%)
Query: 55 GICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSF 114
G C++++ + + Y + + L + HL Y++++L+ G +ER G +++ +LV
Sbjct: 304 GKCLNSYLVFDAHRYASIFTAPLHTLNGYHLLYSVLTLLRVGSNIERRVGLLRYAILVLI 363
Query: 115 LIISTSVCYVMLSYVIYLMNHDVTEL------YQCAIGFSAVLFSMKTIRTRQSPDVTHQ 168
L +S+ YV L + + V + Y+C +G +A+L +MK P +
Sbjct: 364 LTAGSSLAYVCLVKYVLVRAESVGGVYPYEMKYKCFMGPTAILIAMKLAHGELLPYLNST 423
Query: 169 LLNFSVPAVYAPWI---ELVIIHLMVPNASFKGHLSGILVGLCYT 210
L F +PA+ ++ E+ ++H++ P A G+ +G+L GL +
Sbjct: 424 FLIFELPAIPLVFVVLGEIFLLHMLFPQAWVVGNAAGMLAGLVFV 468
>gi|260796227|ref|XP_002593106.1| hypothetical protein BRAFLDRAFT_120182 [Branchiostoma floridae]
gi|229278330|gb|EEN49117.1| hypothetical protein BRAFLDRAFT_120182 [Branchiostoma floridae]
Length = 297
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 117/212 (55%), Gaps = 12/212 (5%)
Query: 4 RFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTI 63
R R + ++LL +Q+ GF IPP TL + +++ + LG
Sbjct: 8 RHRRPGIALVLLAFQMAQAGFQNIPPVTLATLAANVAMFLRLFRGFRYPKLG-------- 59
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCY 123
D+KRL+ +A H D+ HLYYNM S + KG LER GSV+F+ +++ + T
Sbjct: 60 ---EDWKRLIYAAFFHADEWHLYYNMASFMWKGITLERRMGSVRFLYVLAVFTVCTHSLL 116
Query: 124 VMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQ-SPDVTHQLLNFSVPAVYAPWI 182
+ L+Y + H + L CA+GFS V+F++K + T P +T+ + F VP A W+
Sbjct: 117 LGLNYSMDHFFHQSSYLADCAVGFSGVIFALKVLTTHYLPPGMTYVMGWFPVPRRIACWV 176
Query: 183 ELVIIHLMVPNASFKGHLSGILVGLCYTETSL 214
ELV+I +++P ASF GHLSGILVGL YT L
Sbjct: 177 ELVVIQILIPRASFMGHLSGILVGLLYTSGPL 208
>gi|443690109|gb|ELT92325.1| hypothetical protein CAPTEDRAFT_180450 [Capitella teleta]
Length = 356
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 120/206 (58%), Gaps = 1/206 (0%)
Query: 10 LGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDY 69
L I LL+ Q+L +G +PP TL I Q +++ V D +C+S+ + + D+
Sbjct: 9 LAIGLLVAQILHMGVDRVPPVTLGAIAAQVAIFLRLVKLPFGDIHEVCVSSLNVWYRGDW 68
Query: 70 KRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYV 129
KRL L++ H D+ HLY+NMVS++ KG LER GS F +V + T+ V L +
Sbjct: 69 KRLFLASFYHLDEWHLYFNMVSMLWKGVNLERRLGSAYFAYMVLVFSVLTNAILVGLGVI 128
Query: 130 IYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIH 188
+ HD + + CA GFS VLF++K + SP T ++N V + A W EL++IH
Sbjct: 129 AEEILHDHSYISTCAAGFSGVLFALKVVAAHLSPPTTQYVMNIIPVNSRLACWAELLLIH 188
Query: 189 LMVPNASFKGHLSGILVGLCYTETSL 214
++VPN+SF GHL+GILVGL Y + L
Sbjct: 189 ILVPNSSFVGHLAGILVGLLYIKGPL 214
>gi|299471888|emb|CBN77058.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 418
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 115/186 (61%), Gaps = 17/186 (9%)
Query: 56 ICISAHTILN------QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFV 109
+C+ +IL+ + + +RL++S HGDDMHLYYNM S ++KG LE G+ F
Sbjct: 99 VCLLPASILDTYERTGEVEIRRLLMSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFA 158
Query: 110 VLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQL 169
L+SF ++++ ++ ++V+ ++ + ++ CA+GFS VLF++K + +R+SP VT +
Sbjct: 159 GLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACAVGFSGVLFALKYVLSRRSPGVT-SV 217
Query: 170 LNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRVV 229
+ FSV YA W+ELV+I +MVPNASF GHL GIL G+ Y E + V RVV
Sbjct: 218 MGFSVHTRYATWLELVLISVMVPNASFLGHLCGILAGVLYVEVPI----------VLRVV 267
Query: 230 NTLTNV 235
N T +
Sbjct: 268 NLFTGI 273
>gi|410910522|ref|XP_003968739.1| PREDICTED: rhomboid-related protein 4-like [Takifugu rubripes]
Length = 321
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 113/203 (55%), Gaps = 4/203 (1%)
Query: 18 QVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSAL 77
Q+ VG IPP TL ++ + L++ A P + C+S +++ RL+LS L
Sbjct: 18 QLFQVGLDKIPPVTLAVLGLNVYLFLFP--AAPL--MQACVSVQQAYWFKEWHRLLLSPL 73
Query: 78 EHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDV 137
H DD HLY+NMVS + KG LER G F+ L+S + T V Y+ L ++ + D
Sbjct: 74 HHADDFHLYFNMVSFLWKGVRLERRLGGAWFLYLLSVFSLLTGVVYLALETLLAELTQDQ 133
Query: 138 TELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFK 197
+ QCA+GFS VLF++K I P T ++ + YA W+ELV+IH+ P S
Sbjct: 134 SYNMQCAVGFSGVLFALKVINNHYYPGGTTYVMGLPISNRYASWVELVLIHITAPGTSLI 193
Query: 198 GHLSGILVGLCYTETSLGRLVER 220
GHLSGI+VGL YT L +++R
Sbjct: 194 GHLSGIVVGLLYTVGPLKTIMKR 216
>gi|440796367|gb|ELR17476.1| peptidase, S54 (rhomboid) subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 293
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 123/217 (56%), Gaps = 3/217 (1%)
Query: 3 RRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHT 62
RR G++LL QV +GF IPP TL + I LL+ ++ +D +CI A
Sbjct: 2 RRRGGNNAGLILLALQVAQIGFDKIPPVTLIVGAINVLLHYVDTRLSIYD---VCIGAGM 58
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
+ ++ D +RL+L++ H DDMHLYYNMVSL+ KGR+LE GS +F LV + +++
Sbjct: 59 VWHRLDLRRLLLASFFHLDDMHLYYNMVSLLWKGRDLEPRMGSKRFATLVVLFALVSNML 118
Query: 123 YVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWI 182
V+ S ++ CA+GFSAVLF++K + T S + VP Y W
Sbjct: 119 MVVGSVLLDRFADMPGPYNSCAVGFSAVLFALKVVTTHYSTSPYSHFMGMLVPTQYLYWF 178
Query: 183 ELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
ELV+IHL+VP +SF GHL GIL G+ Y + ++E
Sbjct: 179 ELVLIHLLVPGSSFFGHLCGILTGILYVKGVFRPILE 215
>gi|432891062|ref|XP_004075529.1| PREDICTED: rhomboid-related protein 4-like [Oryzias latipes]
Length = 291
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 108/201 (53%), Gaps = 4/201 (1%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M R R LG+LLL QV VG IPP TL ++ + LY+ A P + CIS
Sbjct: 1 MRGRDRRSHLGLLLLASQVFQVGLDRIPPVTLAVMALNVYLYLFP--AAP--LMKTCISV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
H +D++RL+LS + H DD+HLY+NMVS + KG LER G F+ L+S + T
Sbjct: 57 HQAYRYKDWRRLLLSPVHHADDLHLYFNMVSFLWKGVRLERRLGGAWFLYLLSVFSLLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
Y++L ++ + D + CA+GFS VLF++K + P ++ V Y
Sbjct: 117 CVYLVLEGLLTELTQDQSYSAACAVGFSGVLFALKVLNNHYHPGGVTYVMGIPVSNRYVS 176
Query: 181 WIELVIIHLMVPNASFKGHLS 201
W+ELV+IH+ P SF +S
Sbjct: 177 WVELVLIHITSPGTSFAQFVS 197
>gi|393907597|gb|EJD74708.1| hypothetical protein LOAG_18018 [Loa loa]
Length = 314
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 135/221 (61%), Gaps = 12/221 (5%)
Query: 7 RRE--LGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYI--MNVLAQPWDSLGICISAHT 62
RR+ GI LL YQ+ + IPP TL +I+ Q +++ + +L Q + +C+
Sbjct: 8 RRQHNYGIYLLAYQLFNS--PNIPPITLAVIIFQMAIFLGYLPLLGQH-RTEAMCLLPSR 64
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
IL + ++ R++ S + H DDMHLY+NM+SL+ KGR LE GS +F++L++ ++TS
Sbjct: 65 ILYRSEWLRMLASTVMHVDDMHLYFNMISLLWKGRRLEPWLGSRRFLLLLATFALATSST 124
Query: 123 YVMLSYV---IYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNF-SVPAVY 178
V LSY+ ++ N + QCA+GFS VLF++K + T P H L + +P+ +
Sbjct: 125 MVGLSYLADEVFTFNGG-GYMNQCAVGFSGVLFALKVLHTTHFPYSDHNLFGWLPIPSQF 183
Query: 179 APWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
A W EL+++ ++ PNASF GHLSGI+VGL YT L +V+
Sbjct: 184 ACWAELILLQMLTPNASFIGHLSGIIVGLAYTMGPLKTVVD 224
>gi|348676100|gb|EGZ15918.1| hypothetical protein PHYSODRAFT_507191 [Phytophthora sojae]
Length = 326
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 138/264 (52%), Gaps = 15/264 (5%)
Query: 1 MARRFFRRELGILLLLYQVLSVG-FHLIPPGTLTLI-LIQTLLYIMNVLAQPWDSLGICI 58
MA R G+ L+L V V PP TL L+ L+ + + N Q + +C
Sbjct: 13 MAPNVGRNGQGLTLMLMLVRQVQQLERKPPVTLGLMALMYGIHFQKNQTPQLFAPYSLC- 71
Query: 59 SAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIIS 118
+L+ D++R+V S L H DD HLY+NM+S + KG LE GSV+F++ V +L++
Sbjct: 72 -PDRVLSNWDWERIVASGLIHVDDWHLYHNMISFLWKGYNLEYKLGSVRFLLTVGYLLVL 130
Query: 119 TSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVY 178
V V+++ V+ L+QC++GFS VLF++K + SP + F VP Y
Sbjct: 131 CHVLVVVVALVLATGFQMPAPLHQCSVGFSGVLFALKVLLNHNSPAFFSSVYGFQVPTKY 190
Query: 179 APWIELVIIHLMVPNASFKGHLSGILVGLCYTE--------TSLGRLVERSGRSVSRVVN 230
W+ELV+IH +VP +SF GH+ GIL G + + TS R+V R RS++ ++
Sbjct: 191 TAWLELVVIHFLVPRSSFMGHMCGILAGYIFVDSPSMQSAMTSGARVVSRWMRSLAGPIS 250
Query: 231 TLTNVFKLDDDCNGDDEDSDTSAS 254
+ + + D C S +S S
Sbjct: 251 SRS---EHDTRCAAPAHSSRSSTS 271
>gi|388508086|gb|AFK42109.1| unknown [Medicago truncatula]
Length = 335
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 107/187 (57%), Gaps = 9/187 (4%)
Query: 28 PPGTLTLILIQTLLYI----MNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDM 83
PP T LI T++Y+ + L P D + ++H IL +D KR LSA H +
Sbjct: 32 PPVTAALIAANTVIYLRPSFLRHLIPPIDE--VLFNSHLILKNKDLKRFFLSAFYHLGEP 89
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVLV-SFLIISTSVCYVMLSYVIYLMNHDVTELYQ 142
HL +NM+SL+ KG LE GS+QF ++ S L +S S+ V+ + ++D Y+
Sbjct: 90 HLVFNMISLLWKGIHLESSIGSLQFASMIASLLALSQSINLVLSKSLFVFFDYD-RYYYE 148
Query: 143 CAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSG 202
A GFS VLF+MK + QS D T+ + +P+ YA W EL++I + VPN SF GHLSG
Sbjct: 149 YAAGFSGVLFAMKIVLNSQSDDYTN-VYGVLIPSRYAAWAELILIQMFVPNVSFLGHLSG 207
Query: 203 ILVGLCY 209
IL GL Y
Sbjct: 208 ILAGLVY 214
>gi|431917916|gb|ELK17145.1| Rhomboid domain-containing protein 1 [Pteropus alecto]
Length = 189
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 103/194 (53%), Gaps = 6/194 (3%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSL-GICIS 59
M RR G+LLLL Q+ VG + IPP TL + + T ++ P L G C+S
Sbjct: 1 MQRRTRGLNTGLLLLLSQICYVGVNNIPPVTLAALALNTWFFL-----SPLKPLYGSCLS 55
Query: 60 AHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIIST 119
Q+D++RL+LS H DD HLY+NMVSL+ KG LER GS F +++ + T
Sbjct: 56 VEKCFQQKDWQRLLLSPFHHADDWHLYFNMVSLLWKGINLERRLGSKWFAYVIATFSLLT 115
Query: 120 SVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYA 179
V Y+ L + + CA+GFS VLF++K + P ++ F VP +A
Sbjct: 116 GVVYLFLELAFAEFMDEPSFRMNCAVGFSGVLFALKVLNNHYFPGGFVSVMGFPVPNKFA 175
Query: 180 PWIELVIIHLMVPN 193
W ELV IHLMVP
Sbjct: 176 CWAELVAIHLMVPG 189
>gi|340370436|ref|XP_003383752.1| PREDICTED: rhomboid domain-containing protein 1-like [Amphimedon
queenslandica]
Length = 335
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 12/204 (5%)
Query: 57 CISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLI 116
CISA + ++RL L+ H D HLYYNM+S + K R LE+ +GS+ F +++
Sbjct: 77 CISAKNVWYYGQWERLFLAPFIHADSWHLYYNMISFMWKARTLEKRYGSLYFAYMIAMFT 136
Query: 117 ISTSVCYVMLSYVIYLMNH-DVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP 175
+ TS Y++L+ ++L + D + +CA+GFS V+F++K + T P+ + +P
Sbjct: 137 LLTSGVYLILN--VHLAEYFDWSYYNRCAVGFSGVIFAVKVLTTHLQPNHMSYVFGIGIP 194
Query: 176 AVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVER---------SGRSVS 226
+ A W EL++I ++ PNASF GHL+GILVGL + L +++ SG ++
Sbjct: 195 SKLAVWAELLLISVLNPNASFIGHLAGILVGLAFVSGPLKMIMDVPWGIVTSGISGANIG 254
Query: 227 RVVNTLTNVFKLDDDCNGDDEDSD 250
R T D +DSD
Sbjct: 255 RQSYNYTARPSGQRRNESDQQDSD 278
>gi|47221041|emb|CAG12735.1| unnamed protein product [Tetraodon nigroviridis]
Length = 343
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 105/215 (48%), Gaps = 28/215 (13%)
Query: 20 LSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEH 79
VG +PP TL ++ + LY+ A P + C+S +++ RL+LS L H
Sbjct: 20 FQVGLGNVPPVTLAVLGLNVYLYLFP--AAP--LMQACVSVQRAYWFKEWHRLLLSPLHH 75
Query: 80 GDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTE 139
DD HLY+NM S + KG LER G F+ L+S + T V Y++L ++ + D +
Sbjct: 76 ADDFHLYFNMASFLWKGIRLERRLGGAWFLYLLSVFSVLTGVVYLVLETLLAELTQDQSY 135
Query: 140 LYQCAIGFS------------------------AVLFSMKTIRTRQSPDVTHQLLNFSVP 175
QCA+GFS VLF++K + P ++ V
Sbjct: 136 SMQCAVGFSGILRNLNCNVYNGYLYIFLFFLFRGVLFALKVLSNHYHPGGVTYVMGLPVS 195
Query: 176 AVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYT 210
YA W+ELV+IH+ P S GHLSGI+VGL YT
Sbjct: 196 NRYASWVELVLIHITAPGTSLIGHLSGIVVGLLYT 230
>gi|358248954|ref|NP_001240224.1| uncharacterized protein LOC100816495 [Glycine max]
gi|255640981|gb|ACU20770.1| unknown [Glycine max]
Length = 322
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 107/189 (56%), Gaps = 8/189 (4%)
Query: 28 PPGTLTLILIQTLLYI----MNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDM 83
PP T LI TL+Y+ ++ L P + + + H IL +D KR +LS H +
Sbjct: 32 PPFTAALIAANTLIYLRPSFLDPLIPPIEQ--VWFNPHLILKNKDLKRFLLSPFYHIGEP 89
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVLV-SFLIISTSVCYVMLSYVIYLMNHDVTELYQ 142
HL YNM+SL+ KG +LE GSV F +V S L++S V ++ ++ +++ + +
Sbjct: 90 HLVYNMLSLLWKGFQLETSMGSVDFASIVASLLVLSQGVTLMLSKSLLLFFDYERSYYSE 149
Query: 143 CAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSG 202
++GFS VLF+MK + QS + T + VP+ YA W ELV+ L+VP SF GHL G
Sbjct: 150 YSVGFSGVLFAMKVVLNSQSENYT-SVYGIIVPSRYAAWAELVLAQLLVPGVSFLGHLGG 208
Query: 203 ILVGLCYTE 211
IL GL Y +
Sbjct: 209 ILAGLLYLK 217
>gi|356565565|ref|XP_003551010.1| PREDICTED: uncharacterized protein At3g17611-like [Glycine max]
Length = 332
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 106/187 (56%), Gaps = 8/187 (4%)
Query: 28 PPGTLTLILIQTLLYI----MNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDM 83
PP T LI TL+Y+ ++ L P + + + H IL +D KR +LS H +
Sbjct: 43 PPVTAALIAANTLIYLRPSFLDPLIPPIEQ--VWFNPHLILKNKDLKRFLLSPFYHIGEP 100
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVLV-SFLIISTSVCYVMLSYVIYLMNHDVTELYQ 142
HL YNM+SL+ KG +LE GSV F +V S L++S V ++ ++ +++ + +
Sbjct: 101 HLVYNMLSLLWKGFQLETSMGSVNFSSMVASLLVLSQGVTLMLSKSLLLFFDYERSYYSE 160
Query: 143 CAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSG 202
++GFS VLF+MK + QS + T + VP+ YA W ELV+ L+VP SF GHL G
Sbjct: 161 YSVGFSGVLFAMKVVLNSQSENYT-SVYGVIVPSRYAAWAELVLAQLLVPGVSFLGHLGG 219
Query: 203 ILVGLCY 209
IL GL Y
Sbjct: 220 ILAGLLY 226
>gi|9294149|dbj|BAB02051.1| unnamed protein product [Arabidopsis thaliana]
Length = 506
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 114/216 (52%), Gaps = 20/216 (9%)
Query: 7 RRELGILLLLYQVLSVGFH----LIPPGTLTLILIQTLLYIMNVLAQP--------WDSL 54
RR G +L L + +V + PP T +L+ TL+Y+ P W
Sbjct: 180 RRSGGGMLPLLALSAVAEYYRLPWKPPVTASLLAANTLVYLRPAFIDPVIPHISEVW--- 236
Query: 55 GICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSF 114
+ H I +D KRL LSA H ++ HL YNM+SL+ KG +LE GS +F +V
Sbjct: 237 ---FNPHLIFKHKDLKRLFLSAFYHVNEPHLVYNMMSLLWKGIKLETSMGSSEFASMVFT 293
Query: 115 LI-ISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFS 173
LI +S V ++ ++ L ++D + A+GFS VLF+MK + Q+ D + +
Sbjct: 294 LIGMSQGVTLLLAKSLLLLFDYDRAYYNEYAVGFSGVLFAMKVVLNSQAEDYS-SVYGIL 352
Query: 174 VPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
VP YA W EL+++ + VPNASF GHL GIL G+ Y
Sbjct: 353 VPTKYAAWAELILVQMFVPNASFLGHLGGILAGIIY 388
>gi|348537952|ref|XP_003456456.1| PREDICTED: rhomboid domain-containing protein 1-like [Oreochromis
niloticus]
Length = 298
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 125/230 (54%), Gaps = 18/230 (7%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M R F + G+LLLL Q+ G IP TL ++ LY+ P L C+S
Sbjct: 1 MQRGF---QAGLLLLLVQLFQEGPGNIPAITLAVLGFNVYLYVF----PPAPPLKACMSL 53
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVS-FLIIST 119
+ ++++RL+LS L H DD HLY+NM S + KG LER G F+ L+S F +++
Sbjct: 54 DQVYRNKEWRRLLLSPLHHIDDWHLYFNMASFLWKGIRLERRLGGSWFLYLLSVFFLLTG 113
Query: 120 SVCYVMLSYVIYLM-----NHDVTELYQ-----CAIGFSAVLFSMKTIRTRQSPDVTHQL 169
V ++ + +I LM + + E Q CA+GFS VLF++K + +P +
Sbjct: 114 LVYLLLQALMIKLMEGTDRSDPLLEYVQAFSRECAVGFSGVLFALKVVNNHFNPGGVTYV 173
Query: 170 LNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
+N V +A W+ELV+I+L+ P S GHL+G+LVGL YT L ++E
Sbjct: 174 MNIRVSNRFASWVELVLIYLIAPGTSLVGHLAGVLVGLLYTAGPLKTIME 223
>gi|168027437|ref|XP_001766236.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682450|gb|EDQ68868.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 330
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 107/191 (56%), Gaps = 16/191 (8%)
Query: 31 TLTLILIQTLLY--------IMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDD 82
T LI QTL++ I+ L++ +C++ + ++ RD KRL LSAL H D+
Sbjct: 23 TAALIAAQTLIHLRPGKLDAILPTLSE------VCLNPYFVVKNRDLKRLWLSALYHVDE 76
Query: 83 MHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY- 141
HL YNM+SL KG +LE GS + +V+ L+ +S V S + + T Y
Sbjct: 77 THLVYNMISLTWKGIQLENSMGSQNYAAMVAVLLGLSSSLVVASSSFLAFIADSPTSFYS 136
Query: 142 QCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLS 201
+C++GFS VLF++K + SP T+ + VP+ YA W+EL++I + VP SF GHL
Sbjct: 137 ECSVGFSGVLFALKVVLNYNSPTHTN-VYGILVPSRYAAWVELLVIQMFVPGTSFLGHLC 195
Query: 202 GILVGLCYTET 212
GIL GL Y T
Sbjct: 196 GILAGLIYVNT 206
>gi|255645151|gb|ACU23074.1| unknown [Glycine max]
Length = 234
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 107/189 (56%), Gaps = 8/189 (4%)
Query: 28 PPGTLTLILIQTLLYI----MNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDM 83
PP T LI TL+Y+ ++ L P + + + H IL +D KR +LS H +
Sbjct: 32 PPFTAALITANTLIYLRPSFLDPLIPPIEQ--VWFNPHLILKNKDLKRFLLSPFYHIGEP 89
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVLV-SFLIISTSVCYVMLSYVIYLMNHDVTELYQ 142
HL YNM+SL+ KG +LE GSV F +V S L++S V ++ ++ +++ + +
Sbjct: 90 HLVYNMLSLLWKGFQLETSMGSVDFASIVASLLVLSQGVTLMLSKSLLLFFDYERSYYSE 149
Query: 143 CAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSG 202
++GFS VLF+MK + QS + T + VP+ YA W ELV+ L+VP SF GHL G
Sbjct: 150 YSVGFSGVLFAMKVVLNSQSENYT-SVYGIIVPSRYAAWAELVLAQLLVPGVSFLGHLGG 208
Query: 203 ILVGLCYTE 211
IL GL Y +
Sbjct: 209 ILAGLLYLK 217
>gi|311273152|ref|XP_003133738.1| PREDICTED: rhomboid domain-containing protein 1-like [Sus scrofa]
Length = 299
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 106/193 (54%), Gaps = 4/193 (2%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISA 60
M RR +G+LLLL Q+ VG + IPP T+ + + + + +N L + S C+S
Sbjct: 1 MQRRSRGINVGLLLLLSQIYHVGINNIPPVTVATLALN-IWFFLNPLKPLFSS---CLSV 56
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
Q+D++RL+LS L H DD HLY+NM S++ KG LER GS F +++ + T
Sbjct: 57 EKCYQQKDWQRLLLSPLHHVDDWHLYFNMASMLWKGINLERRLGSRWFAYIIATFSLLTG 116
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V Y++L + + + + CA+GFS VLF++K + P +L F VP +A
Sbjct: 117 VVYLLLEFALAELLDEPGFRRNCAVGFSGVLFALKVLNNHYCPGGFVNVLGFPVPNKFAC 176
Query: 181 WIELVIIHLMVPN 193
W EL+ IH + P
Sbjct: 177 WAELLAIHFISPG 189
>gi|30684602|ref|NP_850606.1| rhomboid-like protein 14 [Arabidopsis thaliana]
gi|75247670|sp|Q8RXW0.1|Y3761_ARATH RecName: Full=Uncharacterized protein At3g17611
gi|19310562|gb|AAL85014.1| unknown protein [Arabidopsis thaliana]
gi|21436261|gb|AAM51269.1| unknown protein [Arabidopsis thaliana]
gi|332642458|gb|AEE75979.1| rhomboid-like protein 14 [Arabidopsis thaliana]
Length = 334
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 124/240 (51%), Gaps = 24/240 (10%)
Query: 7 RRELGILLLLYQVLSVGFH----LIPPGTLTLILIQTLLYIMNVLAQP--------WDSL 54
RR G +L L + +V + PP T +L+ TL+Y+ P W
Sbjct: 8 RRSGGGMLPLLALSAVAEYYRLPWKPPVTASLLAANTLVYLRPAFIDPVIPHISEVW--- 64
Query: 55 GICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSF 114
+ H I +D KRL LSA H ++ HL YNM+SL+ KG +LE GS +F +V
Sbjct: 65 ---FNPHLIFKHKDLKRLFLSAFYHVNEPHLVYNMMSLLWKGIKLETSMGSSEFASMVFT 121
Query: 115 LI-ISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFS 173
LI +S V ++ ++ L ++D + A+GFS VLF+MK + Q+ D + +
Sbjct: 122 LIGMSQGVTLLLAKSLLLLFDYDRAYYNEYAVGFSGVLFAMKVVLNSQAEDYS-SVYGIL 180
Query: 174 VPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYTE----TSLGRLVERSGRSVSRVV 229
VP YA W EL+++ + VPNASF GHL GIL G+ Y + S V + R VSR+V
Sbjct: 181 VPTKYAAWAELILVQMFVPNASFLGHLGGILAGIIYLKLKGSYSGSDPVTMAVRGVSRLV 240
>gi|225432236|ref|XP_002270713.1| PREDICTED: uncharacterized protein At3g17611 [Vitis vinifera]
gi|147864086|emb|CAN81122.1| hypothetical protein VITISV_038478 [Vitis vinifera]
gi|297736839|emb|CBI26040.3| unnamed protein product [Vitis vinifera]
Length = 328
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 118/219 (53%), Gaps = 19/219 (8%)
Query: 2 ARRFFRRELGILLLLY---QVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSL---- 54
RR R + LL L+ + VG+ PP T L+ TL+Y+ DS+
Sbjct: 4 GRRRVSRGMLPLLALHTANEYYRVGWK--PPVTAGLLAANTLIYLRPSFI---DSMLPTI 58
Query: 55 -GICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVS 113
+ + H IL +D KR +LS H D+ HL YNM+SL+ KG +LE GS +F +V+
Sbjct: 59 DKVWFNPHLILKHKDLKRFLLSPFYHMDEAHLVYNMMSLLWKGIQLETSMGSAEFASMVA 118
Query: 114 FLI-ISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVT--HQLL 170
L+ +S + ++ ++ +++ Q A+GFS VLF+MK + QS D T H L+
Sbjct: 119 TLLGMSQGITLLLAKSLLLFFDYERAYYSQFAVGFSGVLFAMKVVLNSQSADYTYVHGLI 178
Query: 171 NFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
VP +A W+EL++I + VP SF GHL GIL G+ Y
Sbjct: 179 ---VPTRHAAWVELILIQMFVPGVSFLGHLGGILAGILY 214
>gi|297830378|ref|XP_002883071.1| hypothetical protein ARALYDRAFT_898103 [Arabidopsis lyrata subsp.
lyrata]
gi|297328911|gb|EFH59330.1| hypothetical protein ARALYDRAFT_898103 [Arabidopsis lyrata subsp.
lyrata]
Length = 335
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 105/187 (56%), Gaps = 4/187 (2%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDS--LGICISAHTILNQRDYKRLVLSALEHGDDMHL 85
PP T +L+ TLLY+ P + + H I +D KRL LSA H ++ HL
Sbjct: 34 PPVTASLLAANTLLYLRPAFIDPVIPHISEVWFNPHLIFKHKDLKRLFLSAFYHVNEPHL 93
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLI-ISTSVCYVMLSYVIYLMNHDVTELYQCA 144
YNM+SL+ KG +LE GS +F +V LI +S V ++ ++ L ++D + A
Sbjct: 94 VYNMMSLLWKGIKLETSMGSSEFASMVFTLIGMSQGVTLLLAKSLLVLFDYDRAYYNEYA 153
Query: 145 IGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGIL 204
+GFS VLF++K + Q+ D + + VP YA W EL+++ + VPNASF GHL GIL
Sbjct: 154 VGFSGVLFALKVVLNSQAEDYS-SVYGILVPTKYAAWAELILVQMFVPNASFLGHLGGIL 212
Query: 205 VGLCYTE 211
G+ Y +
Sbjct: 213 AGIIYMK 219
>gi|449480819|ref|XP_004156004.1| PREDICTED: uncharacterized protein At3g17611-like [Cucumis sativus]
Length = 314
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 116/200 (58%), Gaps = 5/200 (2%)
Query: 14 LLLYQVLSVGFHLIP-PGTLTLILIQTLLYIM-NVLAQPWDSLG-ICISAHTILNQRDYK 70
LL YQV+S + L P TL L+ TL+++ N L S+ + +AH I +D K
Sbjct: 4 LLAYQVVSQYYRLQGNPITLGLLASNTLIHLRPNFLHHIIPSIDEVWFNAHLIFKHKDLK 63
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLV-SFLIISTSVCYVMLSYV 129
R +LS H D HL YNM+SL+ KG +LE GS++F +V + LI+S + +++ +
Sbjct: 64 RFLLSPFYHVGDPHLVYNMISLLWKGTQLETSMGSIEFASMVGALLIMSQGITLLLIKSL 123
Query: 130 IYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHL 189
+ N+ Y+ ++GFS VLF+MK + ++ T+ + VP+ +A W+EL++I +
Sbjct: 124 LIFFNYGRPYYYEYSVGFSGVLFAMKVVLGSETDSYTY-VHGLRVPSSHAAWLELILIQM 182
Query: 190 MVPNASFKGHLSGILVGLCY 209
+ P SF GHL GIL GL +
Sbjct: 183 VSPGVSFLGHLGGILAGLLF 202
>gi|449457305|ref|XP_004146389.1| PREDICTED: uncharacterized protein At3g17611-like [Cucumis sativus]
Length = 314
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 124/226 (54%), Gaps = 13/226 (5%)
Query: 14 LLLYQVLSVGFHLIP-PGTLTLILIQTLLYIM-NVLAQPWDSLG-ICISAHTILNQRDYK 70
LL YQV+S + L P TL L+ TL+++ N L S+ + +AH I +D K
Sbjct: 4 LLAYQVVSQYYRLQGNPITLGLLASNTLIHLRPNFLHHIIPSIDEVWFNAHLIFKHKDLK 63
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLV-SFLIISTSVCYVMLSYV 129
R +LS H D HL YNM+SL+ KG +LE GS++F +V + LI+S + +++ +
Sbjct: 64 RFLLSPFYHVGDPHLVYNMISLLWKGTQLETSMGSIEFASMVGALLIMSQGITLLLIKSL 123
Query: 130 IYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHL 189
+ N+ Y+ ++GFS VLF+MK + ++ T+ + VP+ +A W+EL++I +
Sbjct: 124 LIFFNYGRPYYYEYSVGFSGVLFAMKVVLGSETDSYTY-VHGLRVPSSHAAWLELILIQM 182
Query: 190 MVPNASFKGHLSGILVGLCY--------TETSLGRLVERSGRSVSR 227
+ P SF GHL GIL GL + L L+ GR +SR
Sbjct: 183 VSPGVSFLGHLGGILAGLLFLRLKGTNSGSDPLTLLIRSVGRILSR 228
>gi|168008302|ref|XP_001756846.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692084|gb|EDQ78443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 354
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 110/190 (57%), Gaps = 8/190 (4%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSLG----ICISAHTILNQRDYKRLVLSALEHGDDM 83
PP T LI +QTL+++ D+L +C++ + ++ D KRL LSA H D+
Sbjct: 32 PPVTAALIAVQTLIHLRPGKLD--DALPTLSEVCLNPYFVIKDWDLKRLFLSAFYHVDET 89
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY-Q 142
HL YNM+SL+ KG +LE GS +F L++ L+ +S V S ++ + T Y +
Sbjct: 90 HLVYNMISLMWKGVQLEGSMGSQKFAGLLAVLLGLSSSLVVASSSLLAFLADSPTSFYSE 149
Query: 143 CAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSG 202
CA+GFS VLF++K + SP T+ + VP+ YA W+EL++I + VP SF GHL G
Sbjct: 150 CAVGFSGVLFALKVVLNYNSPSHTN-VYGILVPSRYAAWVELLVIQMFVPGTSFLGHLCG 208
Query: 203 ILVGLCYTET 212
IL G+ Y T
Sbjct: 209 ILAGVIYMNT 218
>gi|224107010|ref|XP_002314342.1| predicted protein [Populus trichocarpa]
gi|222863382|gb|EEF00513.1| predicted protein [Populus trichocarpa]
Length = 328
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 113/217 (52%), Gaps = 19/217 (8%)
Query: 28 PPGTLTLILIQTLLY--------IMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEH 79
PP T L+ TL+Y I+ + Q W + H IL RD KR +LS H
Sbjct: 30 PPVTAALLGANTLIYLRPAFLRHILPSIDQVW------FNPHLILKYRDLKRFLLSPFYH 83
Query: 80 GDDMHLYYNMVSLIVKGRELERMFGSVQFV-VLVSFLIISTSVCYVMLSYVIYLMNHDVT 138
D HL YNM+SL+ KG +LE GSV+F +L + L +S + ++ ++ ++D
Sbjct: 84 VSDSHLVYNMMSLLWKGIQLETSVGSVEFASMLAALLAMSQGITLLLARSLLLFFDYDKP 143
Query: 139 ELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKG 198
+ + GFS VLF+MK + QS +T+ + +PA +A W EL++I + VP SF G
Sbjct: 144 FYSEYSAGFSGVLFAMKVVLNSQSESLTN-VYGLVIPARHAAWAELILIQMFVPGVSFLG 202
Query: 199 HLSGILVGLCYTETSLGRLVERSGRSVSRVVNTLTNV 235
HL GIL G+ Y + + ++ + TLTNV
Sbjct: 203 HLGGILAGILYVKL---KRAYSGPDPLTLTIRTLTNV 236
>gi|224178866|ref|XP_002193393.1| PREDICTED: rhomboid-related protein 4-like [Taeniopygia guttata]
Length = 189
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 107/194 (55%), Gaps = 6/194 (3%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLG-ICIS 59
M RR G+LLLLYQ+ VG IP TL ++++ L++ P L C+S
Sbjct: 1 MERRQRGISAGLLLLLYQISQVGLQNIPSVTLGVLVLNIFLFL-----NPLRPLSEACLS 55
Query: 60 AHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIIST 119
+ + +++++RL+L+ H DD HLYYNM+S++ KG LER S+ F +++ +
Sbjct: 56 VNEAVYRKNWQRLLLAPFHHADDWHLYYNMISMLWKGIMLERKLKSIWFAYIIAVFSVLI 115
Query: 120 SVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYA 179
+ Y++L ++ ++ D + C +GFS VLF++K + +P +L + + YA
Sbjct: 116 GIVYMVLELLLVIILDDPSYEMNCGVGFSGVLFALKVLNNHYNPGRVSSVLGLPISSKYA 175
Query: 180 PWIELVIIHLMVPN 193
W+EL+ IH + P
Sbjct: 176 CWVELLAIHFISPG 189
>gi|255556632|ref|XP_002519350.1| conserved hypothetical protein [Ricinus communis]
gi|223541665|gb|EEF43214.1| conserved hypothetical protein [Ricinus communis]
Length = 325
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 105/187 (56%), Gaps = 4/187 (2%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQP-WDSL-GICISAHTILNQRDYKRLVLSALEHGDDMHL 85
PP T L+ TL+Y+ +P S+ + + + IL D KR LSA H + HL
Sbjct: 31 PPVTAGLLAANTLIYLRPAFLRPILPSIHDVWFNPYLILKDGDLKRFFLSAFYHVGESHL 90
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLI-ISTSVCYVMLSYVIYLMNHDVTELYQCA 144
YNM+SL+ KG +LE GSV+F +V+ L+ +S + ++ ++ ++ + A
Sbjct: 91 VYNMMSLLWKGIQLETSMGSVEFASMVAALLTMSQGITLLLAKSLLLFFDYGRPFYSEYA 150
Query: 145 IGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGIL 204
+GFS VLF+MK + QS + TH + VPA +A W EL++I + VP SF GHL GIL
Sbjct: 151 VGFSGVLFAMKVVLNSQSDNYTH-VHGLVVPARHAAWAELILIQMFVPGVSFLGHLGGIL 209
Query: 205 VGLCYTE 211
G+ Y +
Sbjct: 210 AGILYLK 216
>gi|359481109|ref|XP_002267146.2| PREDICTED: uncharacterized protein At3g58460-like [Vitis vinifera]
gi|296089310|emb|CBI39082.3| unnamed protein product [Vitis vinifera]
Length = 406
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 108/194 (55%), Gaps = 17/194 (8%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLY 86
IP T +++I +++Y++ +L + IC S I++Q R+ + + HG +H+
Sbjct: 22 IPFLTSAVVIICSIIYLVCLLVGYDSFVEICFSPSAIISQFQVYRIYTAIIFHGSLLHVL 81
Query: 87 YNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI---------YLMNHDV 137
+NM++L+ G ELER+ GSV+ ++ L S ++ +V+++ ++ YLMN
Sbjct: 82 FNMMALVPLGSELERIMGSVRLFYMIVLLATSNAIFHVLIASLVAYNPFYSYHYLMN--- 138
Query: 138 TELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASF 196
+CAIGFS +LFSM I T S T + F+VPA + WI LV+ L++ N S
Sbjct: 139 ----ECAIGFSGILFSMIVIETSLSGAQTRSVFGLFNVPAKWYAWILLVVFQLLMTNVSL 194
Query: 197 KGHLSGILVGLCYT 210
GHL GIL G YT
Sbjct: 195 LGHLCGILSGFAYT 208
>gi|326489153|dbj|BAK01560.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 342
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 98/186 (52%), Gaps = 7/186 (3%)
Query: 28 PPGTLTLILIQTLLYI----MNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDM 83
PP T LI L+Y+ ++ P + + H I+ D R LSA H +
Sbjct: 45 PPVTAALIAANALVYLRPGALDAFLPPLSR--VAFNPHLIIQYGDLTRFFLSAFYHLSET 102
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC 143
H +YNM SL+ KG +LE GSV+F +V+ L+ + ++LS + L+ ++V Q
Sbjct: 103 HFFYNMTSLLWKGIQLETSMGSVEFASMVTALLGLSQGFTLLLSKGLLLLGNEVPYYDQY 162
Query: 144 AIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGI 203
A+GFS VLF MK + S D L +PA YA W EL++I +P SF GHLSGI
Sbjct: 163 AVGFSGVLFGMKIVLNAWSDDYVF-LHGMVIPAKYAAWAELLLIQAFIPGTSFIGHLSGI 221
Query: 204 LVGLCY 209
L GL Y
Sbjct: 222 LAGLAY 227
>gi|302837730|ref|XP_002950424.1| hypothetical protein VOLCADRAFT_117545 [Volvox carteri f.
nagariensis]
gi|300264429|gb|EFJ48625.1| hypothetical protein VOLCADRAFT_117545 [Volvox carteri f.
nagariensis]
Length = 353
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 91/157 (57%), Gaps = 5/157 (3%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
+ RL+ S H D+ HLY+NM SL+ KG LER +G F +LV+ +++ + YV+++
Sbjct: 81 QWWRLITSGFLHMDEWHLYFNMSSLVWKGIHLERRYGHKLFALLVAEMLLLSHGLYVLVT 140
Query: 128 YVI-YLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVI 186
++ + H +Q A+GFSAVLF +KTI +P ++ VP YA W ELV+
Sbjct: 141 LLLCSVSEHRHIYYHQHAVGFSAVLFGLKTILMYNTPGYD-EIFGVRVPTKYACWAELVL 199
Query: 187 IHLMVPNASFKGHLSGILVG---LCYTETSLGRLVER 220
I ++VP +SF GHL GIL G Y E SL R R
Sbjct: 200 IWVLVPKSSFIGHLCGILAGGLHAQYLEPSLRRWWPR 236
>gi|67968683|dbj|BAE00700.1| unnamed protein product [Macaca fascicularis]
Length = 232
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 83/160 (51%)
Query: 89 MVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFS 148
M S++ KG LER GS F ++++ I T V Y++L + + + CA+GFS
Sbjct: 1 MASMLWKGIHLERRLGSRWFALVITTFSILTGVVYLLLQFAVAEFMDEPDFKRSCAVGFS 60
Query: 149 AVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLC 208
VLF++K + P +L F VP +A W+ELV IHL P SF GHL+GILVGL
Sbjct: 61 GVLFALKVLNNHYCPGGFVNILGFPVPNRFACWVELVAIHLFSPGTSFAGHLAGILVGLM 120
Query: 209 YTETSLGRLVERSGRSVSRVVNTLTNVFKLDDDCNGDDED 248
YT+ L +++E S V + + + +D
Sbjct: 121 YTQGPLKKMMEACAGGFSSNVGYPGQQYYFNSSGSSGYQD 160
>gi|159464026|ref|XP_001690243.1| rhomboid-like protease [Chlamydomonas reinhardtii]
gi|158284231|gb|EDP09981.1| rhomboid-like protease [Chlamydomonas reinhardtii]
Length = 394
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 88/156 (56%), Gaps = 1/156 (0%)
Query: 55 GICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSF 114
G+C+S + + + RL+ S L HG +H+ +NM++ + LER+ G+VQF L+
Sbjct: 48 GVCLSPYETVVHYEVYRLLTSVLVHGGLLHVTFNMLAFVPMACSLERLVGTVQFTYLLLL 107
Query: 115 LIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FS 173
+ + + + S++++ + + QCAIGFS V+F + + QS + F+
Sbjct: 108 MTVLAGLVFTATSFLLFFSHVLPAAMRQCAIGFSGVIFGLIVVDNAQSASSHRSIFGLFT 167
Query: 174 VPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
VPA Y PW L+ L++P+ SF GHL+G+LVG +
Sbjct: 168 VPAAYYPWALLLFWQLLMPSVSFIGHLAGVLVGAAW 203
>gi|357131656|ref|XP_003567452.1| PREDICTED: uncharacterized protein At3g17611-like [Brachypodium
distachyon]
Length = 345
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 96/186 (51%), Gaps = 7/186 (3%)
Query: 28 PPGTLTLILIQTLLYI----MNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDM 83
PP T LI L+Y+ ++ + P + + + I+ D R LSA H +
Sbjct: 45 PPVTAALIAANALVYLRPGALDAVLPPLSR--VAFNPYLIIQYGDLTRFFLSAFYHLSET 102
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC 143
H +YNM SL+ KG +LE GSV+F +V+ L+ + ++LS + L ++ Q
Sbjct: 103 HFFYNMTSLLWKGIQLETSVGSVEFASMVAALLALSQGITLLLSKGLLLFGNETAYYDQY 162
Query: 144 AIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGI 203
A+GFS VLF MK + S D L +PA YA W EL++I +P SF GHL GI
Sbjct: 163 AVGFSGVLFGMKIVLNAWSDDYVF-LHGMVIPAKYAAWAELLLIQAFIPGTSFIGHLGGI 221
Query: 204 LVGLCY 209
L GL Y
Sbjct: 222 LAGLTY 227
>gi|226528725|ref|NP_001140801.1| uncharacterized protein LOC100272876 [Zea mays]
gi|194701136|gb|ACF84652.1| unknown [Zea mays]
gi|195636066|gb|ACG37501.1| rhomboid domain containing 1 [Zea mays]
gi|413946850|gb|AFW79499.1| Rhomboid domain containing 1 [Zea mays]
Length = 344
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 97/190 (51%), Gaps = 15/190 (7%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSLGICIS-------AHTILNQRDYKRLVLSALEHG 80
PP T L+ L+Y+ +P GI S I+ D R LS H
Sbjct: 41 PPVTAALLAGNALIYL-----RPGALDGILPSVTRVSFNPRLIVENGDLVRFFLSPFYHL 95
Query: 81 DDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTEL 140
+ HL+YNM SL+ KG +LE GSV+F +V+ L+ S +L L+ D T
Sbjct: 96 SESHLFYNMTSLLWKGIQLETSMGSVEFASMVAALL-GLSQGIALLLSKGLLLLGDYTAY 154
Query: 141 Y-QCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGH 199
Y Q A+GFS VLF+MK + S D + L +PA YA W EL++I + +P SF GH
Sbjct: 155 YDQYAVGFSGVLFAMKVVLNAWSEDFVY-LHGMVIPAKYAAWAELILIQVFIPGTSFLGH 213
Query: 200 LSGILVGLCY 209
LSGIL GL Y
Sbjct: 214 LSGILAGLVY 223
>gi|242057071|ref|XP_002457681.1| hypothetical protein SORBIDRAFT_03g011570 [Sorghum bicolor]
gi|241929656|gb|EES02801.1| hypothetical protein SORBIDRAFT_03g011570 [Sorghum bicolor]
Length = 344
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
I+ D R LS H + HL+YNM SL+ KG +LE GSV+F +V+ L+ S
Sbjct: 78 IIEYGDLVRFFLSPFYHLSESHLFYNMTSLLWKGIQLETSMGSVEFASMVAALL-GLSQG 136
Query: 123 YVMLSYVIYLMNHDVTELY-QCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPW 181
+L L+ D T Y Q A+GFS VLF+MK + S D + L +PA YA W
Sbjct: 137 ITLLLSKGLLLLGDYTAYYNQYAVGFSGVLFAMKVVLNAWSEDFVY-LHGMVIPAKYAAW 195
Query: 182 IELVIIHLMVPNASFKGHLSGILVGLCY 209
EL++I + +P SF GHLSGIL GL Y
Sbjct: 196 AELILIQVFIPGTSFLGHLSGILAGLVY 223
>gi|255080710|ref|XP_002503928.1| predicted protein [Micromonas sp. RCC299]
gi|226519195|gb|ACO65186.1| predicted protein [Micromonas sp. RCC299]
Length = 232
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 103/195 (52%), Gaps = 3/195 (1%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLY 86
+P GT + + LY+ VL D IC++ +L R+ S L HG +HL
Sbjct: 17 LPLGTRGVFVTCVALYVTGVLLGFDDFAQICMAPSWVLRDGQVYRMFTSVLFHGSVLHLA 76
Query: 87 YNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIG 146
+NM++ + LER+ G+VQF ++ + S+ +V L+++ + + +++CAIG
Sbjct: 77 FNMMAFVPMASSLERLLGTVQFTYILVLFTLLASIFHVGLAFIGGTLGYP--SMHECAIG 134
Query: 147 FSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASFKGHLSGILV 205
FS V+F + + T S + F+VP+ + P L+ + +++P+ SF GHLSG+L
Sbjct: 135 FSGVIFGVIVVDTHLSSVAQRSIFGFFTVPSQWYPLSLLIFLQVLMPSVSFVGHLSGLLA 194
Query: 206 GLCYTETSLGRLVER 220
GL Y L L+ R
Sbjct: 195 GLTYVRGHLNPLLLR 209
>gi|449518911|ref|XP_004166479.1| PREDICTED: uncharacterized protein At3g58460-like [Cucumis sativus]
Length = 344
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 104/189 (55%), Gaps = 9/189 (4%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLY 86
IP T ++ILI +Y++ +L + +C IL+ R+ S L HG +H+
Sbjct: 30 IPFFTSSIILICGTIYLVCLLVGYDSFVEVCFLPVAILSHFQVYRIFTSVLFHGSLLHVL 89
Query: 87 YNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY----- 141
+NM++L+ G ELER+ GS++ + L L IS ++ ++ ++ V M H+ Y
Sbjct: 90 FNMLALVPLGSELERIMGSIRMLYLTILLAISNAIIHLFIAVV---MAHNPFHHYDNLMN 146
Query: 142 QCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASFKGHL 200
+CAIGFS +LFS+ I T S + + F+VPA + WI LV+ L++ N SF GHL
Sbjct: 147 ECAIGFSGILFSLIVIETSLSGIQSRSVFGLFNVPAQWYVWILLVVFQLLMTNVSFLGHL 206
Query: 201 SGILVGLCY 209
GI+ G Y
Sbjct: 207 CGIITGFAY 215
>gi|449459580|ref|XP_004147524.1| PREDICTED: uncharacterized protein At3g58460-like [Cucumis sativus]
Length = 397
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 104/189 (55%), Gaps = 9/189 (4%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLY 86
IP T ++ILI +Y++ +L + +C IL+ R+ S L HG +H+
Sbjct: 22 IPFFTSSIILICGTIYLVCLLVGYDSFVEVCFLPVAILSHFQVYRIFTSVLFHGSLLHVL 81
Query: 87 YNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY----- 141
+NM++L+ G ELER+ GS++ + L L IS ++ ++ ++ V M H+ Y
Sbjct: 82 FNMLALVPLGSELERIMGSIRMLYLTILLAISNAIIHLFIAVV---MAHNPFHHYDNLMN 138
Query: 142 QCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASFKGHL 200
+CAIGFS +LFS+ I T S + + F+VPA + WI LV+ L++ N SF GHL
Sbjct: 139 ECAIGFSGILFSLIVIETSLSGIQSRSVFGLFNVPAQWYVWILLVVFQLLMTNVSFLGHL 198
Query: 201 SGILVGLCY 209
GI+ G Y
Sbjct: 199 CGIITGFAY 207
>gi|413934803|gb|AFW69354.1| hypothetical protein ZEAMMB73_186009 [Zea mays]
Length = 345
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 96/184 (52%), Gaps = 3/184 (1%)
Query: 28 PPGTLTLILIQTLLYIM-NVLAQPWDSLG-ICISAHTILNQRDYKRLVLSALEHGDDMHL 85
PP T L+ +L+Y+ L SL + + I+ D R LS H + HL
Sbjct: 41 PPVTAALLAANSLVYLRPGALDGVLPSLARVSFNPQLIIEYGDLTRFFLSPFYHLSESHL 100
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAI 145
+YNM SL+ KG LE GS +F +V+ L+ + ++LS + L+ D Q A+
Sbjct: 101 FYNMTSLLWKGIHLETSMGSAEFASMVAVLLGLSQGITLLLSRGLLLLGDDTMYYDQHAV 160
Query: 146 GFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILV 205
GFS VLF+MK + S D + L +PA YA W EL++I + +P SF GHL GIL
Sbjct: 161 GFSGVLFAMKVVLNAWSDDFVY-LHGMVIPAKYAAWAELILIQVFIPGTSFLGHLGGILA 219
Query: 206 GLCY 209
GL Y
Sbjct: 220 GLVY 223
>gi|428171532|gb|EKX40448.1| hypothetical protein GUITHDRAFT_75573, partial [Guillardia theta
CCMP2712]
Length = 186
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 90/160 (56%), Gaps = 3/160 (1%)
Query: 57 CISAHTI-LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFL 115
C+ H I ++ R R+V SA HG +HL +NM + + G LE+M G+V+FV L+
Sbjct: 1 CMMPHVIWIDHRQCYRIVTSAFVHGGFLHLGFNMYNFVFAGGRLEQMMGTVRFVNLIVVW 60
Query: 116 IISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTH-QLLNFSV 174
++ + Y ++++V L + +CA+GFS VLF++ T+ + +P T + + +
Sbjct: 61 VLVLGILYFVIAFVGALFQYA-RFWNECAVGFSGVLFAILTVDSFAAPLGTQFSMFGWQI 119
Query: 175 PAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYTETSL 214
PA + PW L+ +++PN SF GHL GIL ++ L
Sbjct: 120 PARWYPWAMLIFTQVLMPNVSFIGHLVGILGAFVFSHGLL 159
>gi|307103357|gb|EFN51618.1| hypothetical protein CHLNCDRAFT_55006 [Chlorella variabilis]
Length = 326
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 108/208 (51%), Gaps = 37/208 (17%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSLGI------CISAHTILNQRDYKRLVLSALEHGD 81
PP T+ L++ Q ++ QP + C+ +IL+ + + RL+ S H D
Sbjct: 63 PPITILLVVAQVFFFL-----QPEGFEWVPSIRQGCLLPRSILSGQ-WGRLLWSPFLHAD 116
Query: 82 DMHLYYNMVSLIVK-------------GRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
++HLYYNM SL+ K G +LE GS + LV+ L + ++ Y+ L+
Sbjct: 117 NLHLYYNMTSLLWKASQQLGAGRCCFWGSQLEPRLGSAAYGALVAELALVSNALYMGLAA 176
Query: 129 VIYLMNH----DVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP-----AVYA 179
+ L H + ++ CA+GFS VLF MK + SP + ++ ++P ++YA
Sbjct: 177 L--LARHAPALGWSLMHACAVGFSGVLFGMKVVLNHNSPGWS-EIYGIALPTKASASMYA 233
Query: 180 PWIELVIIHLMVPNASFKGHLSGILVGL 207
W EL+++ L+VP ASF GHL GIL GL
Sbjct: 234 CWAELLVMQLLVPEASFWGHLCGILAGL 261
>gi|326508430|dbj|BAJ99482.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 81/142 (57%), Gaps = 1/142 (0%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
D R LSA H + H +YNM SL+ KG +LE GSV+F +V+ L+ + ++LS
Sbjct: 14 DLTRFFLSAFYHLSETHFFYNMTSLLWKGIQLETSMGSVEFASMVTALLGLSQGFTLLLS 73
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVII 187
+ L+ ++V Q A+GFS VLF MK + S D L +PA YA W EL++I
Sbjct: 74 KGLLLLGNEVPYYDQYAVGFSGVLFGMKIVLNAWSDDYVF-LHGMVIPAKYAAWAELLLI 132
Query: 188 HLMVPNASFKGHLSGILVGLCY 209
+P SF GHLSGIL GL Y
Sbjct: 133 QAFIPGTSFIGHLSGILAGLAY 154
>gi|302756069|ref|XP_002961458.1| hypothetical protein SELMODRAFT_140420 [Selaginella moellendorffii]
gi|300170117|gb|EFJ36718.1| hypothetical protein SELMODRAFT_140420 [Selaginella moellendorffii]
Length = 413
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 106/188 (56%), Gaps = 5/188 (2%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLG-ICISAHTILNQRDYKRLVLSALEHGDDMHL 85
IP T +++ +YI+++L +D+ +C S T++ R + + L H +H+
Sbjct: 22 IPAITGGTLILCVAIYIVDLLIG-YDTFQQVCFSTDTVIGNFQVYRAITAVLFHASLLHV 80
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTE--LYQC 143
+NM++L+ G LER+ GSV+++ ++ L +S +V +++++Y++ V + L +C
Sbjct: 81 LFNMLALVPIGSSLERVMGSVRYLHVILLLAVSNAVIHILIAYIVAYNPIYVHKSVLMEC 140
Query: 144 AIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASFKGHLSG 202
IGFS +LF+M I + F+VPA + PW+ L+I +++P S GHLSG
Sbjct: 141 QIGFSGILFAMIVIEGSLYTGQNRSIFGLFNVPAKWYPWVLLIIFQMIMPRVSLLGHLSG 200
Query: 203 ILVGLCYT 210
IL G Y+
Sbjct: 201 ILSGFSYS 208
>gi|302776366|ref|XP_002971354.1| hypothetical protein SELMODRAFT_147697 [Selaginella moellendorffii]
gi|300161336|gb|EFJ27952.1| hypothetical protein SELMODRAFT_147697 [Selaginella moellendorffii]
Length = 413
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 104/187 (55%), Gaps = 3/187 (1%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLY 86
IP T +++ +YI+++L + +C S +++ R + + L H +H+
Sbjct: 22 IPAITGGTLILCVAIYIVDLLIGYDNFQQVCFSTDSVIGNFQVYRAITAVLFHASLLHVL 81
Query: 87 YNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTE--LYQCA 144
+NM++L+ G LER+ GSV+++ ++ L +S +V +++++Y++ V + L +C
Sbjct: 82 FNMLALVPIGSSLERIMGSVRYLHVILLLAVSNAVIHILIAYIVAYNPIYVHKSVLMECQ 141
Query: 145 IGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASFKGHLSGI 203
IGFS +LF+M I + F+VPA + PW+ L+I +++P S GHLSGI
Sbjct: 142 IGFSGILFAMIVIEGSLYTGQNRSIFGLFNVPAKWYPWVLLIIFQMIMPRVSLLGHLSGI 201
Query: 204 LVGLCYT 210
L G Y+
Sbjct: 202 LSGFAYS 208
>gi|115436016|ref|NP_001042766.1| Os01g0283500 [Oryza sativa Japonica Group]
gi|13486724|dbj|BAB39959.1| OSJNBa0004B13.13 [Oryza sativa Japonica Group]
gi|13486740|dbj|BAB39974.1| unknown protein [Oryza sativa Japonica Group]
gi|15408827|dbj|BAB64219.1| unknown protein [Oryza sativa Japonica Group]
gi|113532297|dbj|BAF04680.1| Os01g0283500 [Oryza sativa Japonica Group]
gi|222618217|gb|EEE54349.1| hypothetical protein OsJ_01336 [Oryza sativa Japonica Group]
Length = 350
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 95/190 (50%), Gaps = 9/190 (4%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFL 115
+ + H I++ D R LSA H + H ++NM SL+ KG +LE GSV+F +V+ L
Sbjct: 78 VAFNPHLIIHYCDLTRFFLSAFYHLSETHFFFNMSSLLWKGIQLETSMGSVEFASMVAAL 137
Query: 116 IISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP 175
+ + ++LS + L +D Q A+GFS VLF MK + S D L +P
Sbjct: 138 LGMSQGITLLLSKGLLLFGNDEAYYDQYAVGFSGVLFGMKVVLNAWSDDYVF-LHGVVIP 196
Query: 176 AVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY--------TETSLGRLVERSGRSVSR 227
A YA W EL++I +P S GHL GIL GL Y L L+ G++V
Sbjct: 197 AKYAAWAELLLIQAFIPGTSLIGHLGGILAGLAYLWLKRSFSGPDPLSLLISGIGKAVRW 256
Query: 228 VVNTLTNVFK 237
V + +F+
Sbjct: 257 PVGFVQKLFR 266
>gi|218187998|gb|EEC70425.1| hypothetical protein OsI_01431 [Oryza sativa Indica Group]
Length = 348
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 95/190 (50%), Gaps = 9/190 (4%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFL 115
+ + H I++ D R LSA H + H ++NM SL+ KG +LE GSV+F +V+ L
Sbjct: 76 VAFNPHLIIHYCDLTRFFLSAFYHLSETHFFFNMSSLLWKGIQLETSMGSVEFASMVAAL 135
Query: 116 IISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP 175
+ + ++LS + L +D Q A+GFS VLF MK + S D L +P
Sbjct: 136 LGMSQGITLLLSKGLLLFGNDEAYYDQYAVGFSGVLFGMKVVLNAWSDDYVF-LHGVVIP 194
Query: 176 AVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY--------TETSLGRLVERSGRSVSR 227
A YA W EL++I +P S GHL GIL GL Y L L+ G++V
Sbjct: 195 AKYAAWAELLLIQAFIPGTSLIGHLGGILAGLAYLWLKRSFSGPDPLSLLISGIGKAVRW 254
Query: 228 VVNTLTNVFK 237
V + +F+
Sbjct: 255 PVGFVQKLFR 264
>gi|334186083|ref|NP_001190126.1| rhomboid-like protein 15 [Arabidopsis thaliana]
gi|332646264|gb|AEE79785.1| rhomboid-like protein 15 [Arabidopsis thaliana]
Length = 426
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 109/194 (56%), Gaps = 11/194 (5%)
Query: 24 FHLIPPGTLTLILIQTLLYIMNVLAQPWDSL-GICISAHTILNQRDYKRLVLSALEHGDD 82
++ IP T +++++ ++Y++ +L +D+ +C I+++ R + + HG
Sbjct: 42 WNAIPFLTSSVVVVCGVIYLICLLTG-YDTFYEVCFLPSAIISRFQVYRFYTAIIFHGSL 100
Query: 83 MHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYV-----IYLMNHDV 137
+H+ +NM++L+ G ELER+ GSV+ + L L + +V +++++ + Y +H +
Sbjct: 101 LHVLFNMMALVPMGSELERIMGSVRLLYLTVLLATTNAVLHLLIASLAGYNPFYQYDHLM 160
Query: 138 TELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASF 196
E CAIGFS +LFSM I T S + + F+VPA PWI L++ L++ N S
Sbjct: 161 NE---CAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKLYPWILLIVFQLLMTNVSL 217
Query: 197 KGHLSGILVGLCYT 210
GHL GIL G Y+
Sbjct: 218 LGHLCGILSGFSYS 231
>gi|18410961|ref|NP_567064.1| rhomboid-like protein 15 [Arabidopsis thaliana]
gi|73921121|sp|Q8LB17.2|Y3846_ARATH RecName: Full=Uncharacterized protein At3g58460
gi|22531096|gb|AAM97052.1| putative protein [Arabidopsis thaliana]
gi|23197956|gb|AAN15505.1| putative protein [Arabidopsis thaliana]
gi|332646263|gb|AEE79784.1| rhomboid-like protein 15 [Arabidopsis thaliana]
Length = 403
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 109/194 (56%), Gaps = 11/194 (5%)
Query: 24 FHLIPPGTLTLILIQTLLYIMNVLAQPWDSL-GICISAHTILNQRDYKRLVLSALEHGDD 82
++ IP T +++++ ++Y++ +L +D+ +C I+++ R + + HG
Sbjct: 19 WNAIPFLTSSVVVVCGVIYLICLLTG-YDTFYEVCFLPSAIISRFQVYRFYTAIIFHGSL 77
Query: 83 MHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYV-----IYLMNHDV 137
+H+ +NM++L+ G ELER+ GSV+ + L L + +V +++++ + Y +H +
Sbjct: 78 LHVLFNMMALVPMGSELERIMGSVRLLYLTVLLATTNAVLHLLIASLAGYNPFYQYDHLM 137
Query: 138 TELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASF 196
E CAIGFS +LFSM I T S + + F+VPA PWI L++ L++ N S
Sbjct: 138 NE---CAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKLYPWILLIVFQLLMTNVSL 194
Query: 197 KGHLSGILVGLCYT 210
GHL GIL G Y+
Sbjct: 195 LGHLCGILSGFSYS 208
>gi|21593075|gb|AAM65024.1| unknown [Arabidopsis thaliana]
Length = 403
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 109/194 (56%), Gaps = 11/194 (5%)
Query: 24 FHLIPPGTLTLILIQTLLYIMNVLAQPWDSL-GICISAHTILNQRDYKRLVLSALEHGDD 82
++ IP T +++++ ++Y++ +L +D+ +C I+++ R + + HG
Sbjct: 19 WNAIPFLTSSVVVVCGVIYLICLLTG-YDTFYEVCFLPSAIISRFQVYRFYTAIIFHGSL 77
Query: 83 MHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYV-----IYLMNHDV 137
+H+ +NM++L+ G ELER+ GSV+ + L L + +V +++++ + Y +H +
Sbjct: 78 LHVLFNMMALVPMGSELERIMGSVRLLYLTVLLATTNAVLHLLIASLAGYNPFYQYDHLM 137
Query: 138 TELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASF 196
E CAIGFS +LFSM I T S + + F+VPA PWI L++ L++ N S
Sbjct: 138 NE---CAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKLYPWILLIVFQLLMTNVSL 194
Query: 197 KGHLSGILVGLCYT 210
GHL GIL G Y+
Sbjct: 195 LGHLCGILSGFSYS 208
>gi|227204337|dbj|BAH57020.1| AT3G58460 [Arabidopsis thaliana]
Length = 362
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 109/194 (56%), Gaps = 11/194 (5%)
Query: 24 FHLIPPGTLTLILIQTLLYIMNVLAQPWDSL-GICISAHTILNQRDYKRLVLSALEHGDD 82
++ IP T +++++ ++Y++ +L +D+ +C I+++ R + + HG
Sbjct: 19 WNAIPFLTSSVVVVCGVIYLICLLTG-YDTFYEVCFLPSAIISRFQVYRFYTAIIFHGSL 77
Query: 83 MHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYV-----IYLMNHDV 137
+H+ +NM++L+ G ELER+ GSV+ + L L + +V +++++ + Y +H +
Sbjct: 78 LHVLFNMMALVPMGSELERIMGSVRLLYLTVLLATTNAVLHLLIASLAGYNPFYQYDHLM 137
Query: 138 TELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASF 196
E CAIGFS +LFSM I T S + + F+VPA PWI L++ L++ N S
Sbjct: 138 NE---CAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKLYPWILLIVFQLLMTNVSL 194
Query: 197 KGHLSGILVGLCYT 210
GHL GIL G Y+
Sbjct: 195 LGHLCGILSGFSYS 208
>gi|6735363|emb|CAB68184.1| putative protein [Arabidopsis thaliana]
Length = 411
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 109/194 (56%), Gaps = 11/194 (5%)
Query: 24 FHLIPPGTLTLILIQTLLYIMNVLAQPWDSL-GICISAHTILNQRDYKRLVLSALEHGDD 82
++ IP T +++++ ++Y++ +L +D+ +C I+++ R + + HG
Sbjct: 19 WNAIPFLTSSVVVVCGVIYLICLLTG-YDTFYEVCFLPSAIISRFQVYRFYTAIIFHGSL 77
Query: 83 MHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYV-----IYLMNHDV 137
+H+ +NM++L+ G ELER+ GSV+ + L L + +V +++++ + Y +H +
Sbjct: 78 LHVLFNMMALVPMGSELERIMGSVRLLYLTVLLATTNAVLHLLIASLAGYNPFYQYDHLM 137
Query: 138 TELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASF 196
E CAIGFS +LFSM I T S + + F+VPA PWI L++ L++ N S
Sbjct: 138 NE---CAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKLYPWILLIVFQLLMTNVSL 194
Query: 197 KGHLSGILVGLCYT 210
GHL GIL G Y+
Sbjct: 195 LGHLCGILSGFSYS 208
>gi|168022284|ref|XP_001763670.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685163|gb|EDQ71560.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 214
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 106/185 (57%), Gaps = 5/185 (2%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDS-LGICISAHTILNQRDYKRLVLSALEHGDDMHL 85
+P T ++ + T +Y++ +L +DS + +C+ I+++ R S + H +HL
Sbjct: 22 VPCVTAGVVFLCTAIYVICLLFG-YDSFIQVCLLPKYIVDRVQVYRPYTSIVFHASILHL 80
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYV-IYLMNHDVTEL-YQC 143
+NM++L G LER+ GSV+++ ++ + S ++ V+++Y+ Y H L Y+C
Sbjct: 81 VFNMLALAPIGSGLERILGSVRYLHVLFIMATSNALIEVVIAYLAAYNPVHPYPGLMYEC 140
Query: 144 AIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASFKGHLSG 202
IGFS V+FSM + T +P T + FSVPA + PW LV+ L++P AS GHL+G
Sbjct: 141 GIGFSGVIFSMIVMETSLNPVQTRSVFGFFSVPAKWYPWALLVLFQLLMPRASLLGHLAG 200
Query: 203 ILVGL 207
IL G
Sbjct: 201 ILSGF 205
>gi|297820678|ref|XP_002878222.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297324060|gb|EFH54481.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 403
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 109/194 (56%), Gaps = 11/194 (5%)
Query: 24 FHLIPPGTLTLILIQTLLYIMNVLAQPWDSL-GICISAHTILNQRDYKRLVLSALEHGDD 82
++ IP T +++++ ++Y++ +L +D+ +C I+++ R + + HG
Sbjct: 19 WNAIPFLTSSVVVVCGVIYLICLLTG-YDTFYEVCFLPSAIISRFQVYRFYTAIIFHGSL 77
Query: 83 MHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYV-----IYLMNHDV 137
+H+ +NM++L+ G ELER+ GSV+ + L L + ++ +++++ + Y +H +
Sbjct: 78 LHVLFNMMALVPMGSELERIMGSVRLLYLTILLATTNAILHLIIASLAGYNPFYQYDHLM 137
Query: 138 TELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASF 196
E CAIGFS +LFSM I T S + + F+VPA PWI L++ L++ N S
Sbjct: 138 NE---CAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKLYPWILLIVFQLLMTNVSL 194
Query: 197 KGHLSGILVGLCYT 210
GHL GIL G Y+
Sbjct: 195 LGHLCGILSGFSYS 208
>gi|108710127|gb|ABF97922.1| expressed protein [Oryza sativa Japonica Group]
Length = 379
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 105/191 (54%), Gaps = 11/191 (5%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLG-ICISAHTILNQRDYKRLVLSALEHGDDMHL 85
IP T +ILI +Y++ +L +DS IC + ++ R S + HG +H+
Sbjct: 22 IPFITSGVILICGAIYLVCLLTG-YDSFAEICFLPSVVASRFQVYRFYTSVVFHGSLLHV 80
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYV-----IYLMNHDVTEL 140
+NM++L+ G ELER+ GSV+ + L+ L + ++ +++++++ +Y ++ V E
Sbjct: 81 LFNMLALVPLGTELERIMGSVRLLFLMFLLATTNAIFHLIIAFLAAYNPLYPLHFLVDE- 139
Query: 141 YQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASFKGH 199
C+IGFS V+FSM I T S T + F+VPA + WI LV+ + N S GH
Sbjct: 140 --CSIGFSGVIFSMIVIETSLSGVQTRSVFGLFNVPANWYAWILLVLFQFLASNVSLLGH 197
Query: 200 LSGILVGLCYT 210
L GIL G YT
Sbjct: 198 LCGILSGFAYT 208
>gi|62733420|gb|AAX95537.1| Putative Rhomboid family protein [Oryza sativa Japonica Group]
Length = 393
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 105/191 (54%), Gaps = 11/191 (5%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLG-ICISAHTILNQRDYKRLVLSALEHGDDMHL 85
IP T +ILI +Y++ +L +DS IC + ++ R S + HG +H+
Sbjct: 16 IPFITSGVILICGAIYLVCLLTG-YDSFAEICFLPSVVASRFQVYRFYTSVVFHGSLLHV 74
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYV-----IYLMNHDVTEL 140
+NM++L+ G ELER+ GSV+ + L+ L + ++ +++++++ +Y ++ V E
Sbjct: 75 LFNMLALVPLGTELERIMGSVRLLFLMFLLATTNAIFHLIIAFLAAYNPLYPLHFLVDE- 133
Query: 141 YQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASFKGH 199
C+IGFS V+FSM I T S T + F+VPA + WI LV+ + N S GH
Sbjct: 134 --CSIGFSGVIFSMIVIETSLSGVQTRSVFGLFNVPANWYAWILLVLFQFLASNVSLLGH 191
Query: 200 LSGILVGLCYT 210
L GIL G YT
Sbjct: 192 LCGILSGFAYT 202
>gi|31712095|gb|AAP68399.1| unknown protein [Oryza sativa Japonica Group]
gi|108710126|gb|ABF97921.1| expressed protein [Oryza sativa Japonica Group]
gi|218193411|gb|EEC75838.1| hypothetical protein OsI_12827 [Oryza sativa Indica Group]
gi|222625474|gb|EEE59606.1| hypothetical protein OsJ_11927 [Oryza sativa Japonica Group]
Length = 399
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 105/191 (54%), Gaps = 11/191 (5%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLG-ICISAHTILNQRDYKRLVLSALEHGDDMHL 85
IP T +ILI +Y++ +L +DS IC + ++ R S + HG +H+
Sbjct: 22 IPFITSGVILICGAIYLVCLLTG-YDSFAEICFLPSVVASRFQVYRFYTSVVFHGSLLHV 80
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYV-----IYLMNHDVTEL 140
+NM++L+ G ELER+ GSV+ + L+ L + ++ +++++++ +Y ++ V E
Sbjct: 81 LFNMLALVPLGTELERIMGSVRLLFLMFLLATTNAIFHLIIAFLAAYNPLYPLHFLVDE- 139
Query: 141 YQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASFKGH 199
C+IGFS V+FSM I T S T + F+VPA + WI LV+ + N S GH
Sbjct: 140 --CSIGFSGVIFSMIVIETSLSGVQTRSVFGLFNVPANWYAWILLVLFQFLASNVSLLGH 197
Query: 200 LSGILVGLCYT 210
L GIL G YT
Sbjct: 198 LCGILSGFAYT 208
>gi|348676094|gb|EGZ15912.1| hypothetical protein PHYSODRAFT_334115 [Phytophthora sojae]
Length = 275
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 99/188 (52%), Gaps = 11/188 (5%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSL--GICISAHTILNQRDYKRLVLSALEHGDDMHL 85
PP T+ LI + +Y+++V A SL + ++ ++ + +S H +D+HL
Sbjct: 48 PPVTIALIAV---MYLLHVQATRTPSLLRPFALCPGKVVANKEIAAVFISPFIHWEDLHL 104
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAI 145
Y +++S + KG +LE GS+ F VL+ +LI+ T V ++VI + +C
Sbjct: 105 YQSILSFLWKGYKLEGRLGSIGFCVLLVYLIVLTQALIVAGAHVI-----SWGAMQECIT 159
Query: 146 GFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILV 205
GFS VL ++K I SP T +L +F VP YA W+ELVI +L+VP +G++
Sbjct: 160 GFSGVLTAIKVILNVNSPAFT-KLYSFKVPTKYAAWLELVITYLLVPKLPILAQAAGLIA 218
Query: 206 GLCYTETS 213
G Y T
Sbjct: 219 GYVYVVTP 226
>gi|242094106|ref|XP_002437543.1| hypothetical protein SORBIDRAFT_10g029120 [Sorghum bicolor]
gi|241915766|gb|EER88910.1| hypothetical protein SORBIDRAFT_10g029120 [Sorghum bicolor]
Length = 344
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 95/184 (51%), Gaps = 3/184 (1%)
Query: 28 PPGTLTLILIQTLLYIM-NVLAQPWDSLG-ICISAHTILNQRDYKRLVLSALEHGDDMHL 85
PP T L+ +L+Y+ L SL + + I+ D R LS H + HL
Sbjct: 41 PPVTAALLAANSLIYLRPGALDGVLPSLSRVSFNPQLIVEYGDLVRFFLSPFYHLSESHL 100
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAI 145
+YNM SL+ KG +LE GS +F + + L+ + ++LS + L+ D Q A+
Sbjct: 101 FYNMTSLLWKGIQLETSMGSTEFASMSAVLLGLSQGITLLLSRGLLLLGDDTAYYDQHAV 160
Query: 146 GFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILV 205
GFS +LF+MK + S D + L +P+ YA W EL++I + +P SF G L GIL
Sbjct: 161 GFSGILFAMKVVLNAWSDDFVY-LHGMILPSKYAAWAELILIQVFIPGTSFLGQLGGILA 219
Query: 206 GLCY 209
GL Y
Sbjct: 220 GLVY 223
>gi|357119970|ref|XP_003561705.1| PREDICTED: uncharacterized protein At3g58460-like [Brachypodium
distachyon]
Length = 403
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 88/158 (55%), Gaps = 3/158 (1%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFL 115
IC + + R S L HG +H+ +NM++L G ELER+ GSV+ + L+ L
Sbjct: 51 ICFLPSAVASHFQVYRFYTSVLFHGSLLHVLFNMLTLAPLGTELERIMGSVRLLFLMFLL 110
Query: 116 IISTSVCYVMLSYVI-YLMNHDVTELY-QCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-F 172
+ +V ++++++++ Y + V L +C+IGFS VLFSM I T S + + F
Sbjct: 111 ATTNAVLHLIVAFLVAYNPLYPVPSLVDECSIGFSGVLFSMIVIETSLSGVQSRSVFGLF 170
Query: 173 SVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYT 210
++PA + WI L++ + N S GHLSGIL G YT
Sbjct: 171 NIPAKWYAWILLILFQFLASNVSLLGHLSGILSGFAYT 208
>gi|348676108|gb|EGZ15926.1| hypothetical protein PHYSODRAFT_459480 [Phytophthora sojae]
Length = 244
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 99/188 (52%), Gaps = 11/188 (5%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSL--GICISAHTILNQRDYKRLVLSALEHGDDMHL 85
PP T+ LI ++Y+++V A SL + ++ ++ + +S H +D+HL
Sbjct: 19 PPVTIALI---AVMYLLHVQATRTPSLLRPFALCPGKVVANKEIAAVFISPFIHWEDLHL 75
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAI 145
Y +++S + KG +LE GS+ F VL+ +LI+ T V ++VI + +C
Sbjct: 76 YQSILSFLWKGYKLEGRLGSIGFCVLLVYLIVLTQALIVAGAHVI-----SWGAMQECIT 130
Query: 146 GFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILV 205
GFS VL ++K I SP T +L +F VP YA W+ELVI +L+VP +G++
Sbjct: 131 GFSGVLTAIKVILNVNSPAFT-KLYSFKVPTKYAAWLELVITYLLVPKLPILAQAAGLIA 189
Query: 206 GLCYTETS 213
G Y T
Sbjct: 190 GYVYVVTP 197
>gi|242033515|ref|XP_002464152.1| hypothetical protein SORBIDRAFT_01g013170 [Sorghum bicolor]
gi|241918006|gb|EER91150.1| hypothetical protein SORBIDRAFT_01g013170 [Sorghum bicolor]
Length = 396
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 103/188 (54%), Gaps = 5/188 (2%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLG-ICISAHTILNQRDYKRLVLSALEHGDDMHL 85
IP T ++LI ++Y++ +L +DS IC + + R S L HG +H+
Sbjct: 22 IPFVTSGVVLICGVIYLLCLLIG-YDSYAEICFLPSAVASHFQVYRFYTSVLFHGSLLHV 80
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI-YLMNHDVTELY-QC 143
+NM++L+ G ELER+ GSV+ + L+ L + ++ ++ +++++ Y V L +C
Sbjct: 81 LFNMLALVPLGTELERIMGSVRLLFLMFLLATTNAILHLTIAFLVAYNPLFPVPNLVNEC 140
Query: 144 AIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASFKGHLSG 202
+IGFS V+FSM I T S + + F+VPA + WI LV+ + N S GHL G
Sbjct: 141 SIGFSGVIFSMIVIETSLSGVQSRSVFGLFNVPAKWYAWILLVLFQFLASNVSLLGHLCG 200
Query: 203 ILVGLCYT 210
IL G YT
Sbjct: 201 ILSGFAYT 208
>gi|224001444|ref|XP_002290394.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973816|gb|EED92146.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 331
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 99/182 (54%), Gaps = 4/182 (2%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQP-WDSLGICISAHTILNQRDYKRLVLSALEHGDDMHL 85
IP TL+++ + +Y+ + P + +C +L +Y R++ S+L HG MH+
Sbjct: 11 IPLATLSIMALCCFVYLYQLAFDPTLHNFTMC--PRLVLYMNEYYRIITSSLFHGSLMHI 68
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAI 145
NM+S + G LE+ FG+ + V + ++ TSV Y+ S+++Y+ +YQ ++
Sbjct: 69 GMNMMSTMAIGTSLEKRFGTFTMALTVLWGVLLTSVIYMTTSWLLYVGFGYEKMMYQHSL 128
Query: 146 GFSAVLFSMKTIRTRQSPDVTHQLLNF-SVPAVYAPWIELVIIHLMVPNASFKGHLSGIL 204
GFS V+F + + +P+ + + V + PW LV++ ++P SF GHLSGIL
Sbjct: 129 GFSGVIFQLSVLEANLTPNRSRSVFGMIQVSSKMYPWCLLVVLQFIMPQISFLGHLSGIL 188
Query: 205 VG 206
+G
Sbjct: 189 LG 190
>gi|356570925|ref|XP_003553633.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
At3g58460-like [Glycine max]
Length = 415
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 108/195 (55%), Gaps = 19/195 (9%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLG-ICISAHTILNQRDYKRLVLSALEHGDDMHL 85
IP T ++++ ++Y++ +L +DS +C ++++ R+ S L HG +H+
Sbjct: 28 IPFLTSAVVVVCGIIYLVCLLVG-YDSFNEVCFLPSAVVSRFQVYRIYTSILFHGSLLHV 86
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI---------YLMNHD 136
+NM++L+ G ELER+ GSV+ + ++ + S ++ +V+++ ++ YLMN
Sbjct: 87 VFNMMALVPLGSELERIMGSVRLLYVIILVATSNAIFHVLIALLVAHNPLLTYDYLMN-- 144
Query: 137 VTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNAS 195
+CAIGFS VLFSM I T S + + F+VPA + + LV+ L++ N S
Sbjct: 145 -----ECAIGFSGVLFSMIVIETSLSGVQSRSVFGLFNVPAKWYAFFLLVVFQLLMQNVS 199
Query: 196 FKGHLSGILVGLCYT 210
GHL GIL G YT
Sbjct: 200 LLGHLCGILSGFAYT 214
>gi|255581586|ref|XP_002531598.1| Rhomboid protein, putative [Ricinus communis]
gi|223528794|gb|EEF30801.1| Rhomboid protein, putative [Ricinus communis]
Length = 397
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 89/158 (56%), Gaps = 3/158 (1%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFL 115
IC I++ R+ S L HG +H+++NM++L+ G ELER+ GSV+ + L L
Sbjct: 51 ICFLPSAIISHFQVYRIYTSILFHGSLLHVFFNMMALVPLGSELERIMGSVRLLYLTILL 110
Query: 116 IISTSVCYVMLSYVIY--LMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-F 172
S ++ ++ ++ ++ + D + +CAIGFS +LFSM I T S + + F
Sbjct: 111 ATSNAIFHLFIATLVAHNPFHSDQHLINECAIGFSGILFSMIVIETSLSGVQSRSVFGLF 170
Query: 173 SVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYT 210
+VPA + +I LV+ L++ N S GHL GIL G YT
Sbjct: 171 NVPAKWYAFILLVVFQLLMTNVSLLGHLCGILSGFAYT 208
>gi|358348102|ref|XP_003638088.1| hypothetical protein MTR_118s0012 [Medicago truncatula]
gi|355504023|gb|AES85226.1| hypothetical protein MTR_118s0012 [Medicago truncatula]
Length = 403
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 105/195 (53%), Gaps = 19/195 (9%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLG-ICISAHTILNQRDYKRLVLSALEHGDDMHL 85
IP T ++++ +Y + +L +DS IC ++++ R+ + L HG +H+
Sbjct: 22 IPFFTSAVVIVCGAIYFVCLLVG-YDSFSEICFLPSAVVSRFQVYRIYTAILFHGSLLHV 80
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI---------YLMNHD 136
+NM++L+ G ELER+ GSV+ + + L S ++ +V ++ ++ YLMN
Sbjct: 81 LFNMMALVPLGSELERIMGSVRLLYVTILLATSNAIIHVFIALLVAYNPILTNGYLMN-- 138
Query: 137 VTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNAS 195
+CAIGFS VLFSM I T S + + F+VPA + + LV+ L++ N S
Sbjct: 139 -----ECAIGFSGVLFSMIVIETSLSGVQSRSVFGLFNVPAKWYAFFLLVVFQLLMQNVS 193
Query: 196 FKGHLSGILVGLCYT 210
GHLSGI+ G YT
Sbjct: 194 LLGHLSGIVSGFAYT 208
>gi|356505467|ref|XP_003521512.1| PREDICTED: uncharacterized protein At3g58460-like [Glycine max]
Length = 414
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 108/195 (55%), Gaps = 19/195 (9%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSL-GICISAHTILNQRDYKRLVLSALEHGDDMHL 85
IP T ++++ ++Y++ +L +DS +C ++++ R+ S L HG +H+
Sbjct: 28 IPFLTSAVVVVCGVIYLICLLVG-YDSFYEVCFLPSAVVSRFQVYRIYTSILFHGSLLHV 86
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI---------YLMNHD 136
+NM++L+ G ELER+ GSV+ + ++ + S ++ +V+++ ++ YLMN
Sbjct: 87 VFNMMALVPLGSELERIMGSVRLLYVIILVATSNAIFHVLIALLVAHNPLLTYDYLMN-- 144
Query: 137 VTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNAS 195
+CAIGFS VLFSM I T S + + F+VPA + + LV+ L++ N S
Sbjct: 145 -----ECAIGFSGVLFSMIVIETSLSGVQSRSVFGLFNVPAKWYAFFLLVVFQLLMQNVS 199
Query: 196 FKGHLSGILVGLCYT 210
GHL GIL G YT
Sbjct: 200 LLGHLCGILSGFAYT 214
>gi|326500926|dbj|BAJ95129.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 401
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 86/163 (52%), Gaps = 13/163 (7%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFL 115
IC + + R S L HG +H+ +NM++ + G ELER+ GSV+ + L+ L
Sbjct: 51 ICFLPSAVASHFQVYRFYTSVLFHGSLLHVLFNMLTFVPLGTELERIMGSVRLLFLMFLL 110
Query: 116 IISTSVCYVMLSYVIYLMNHDVTELY-------QCAIGFSAVLFSMKTIRTRQSPDVTHQ 168
+ ++ ++++++++ D LY +C+IGFS V+FSM I T S
Sbjct: 111 ATTNAIFHLIVAFLV-----DYNPLYHVSYLVDECSIGFSGVIFSMIVIETSLSGVQYRS 165
Query: 169 LLN-FSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYT 210
+ F+VPA + WI L++ + N S GHLSGIL G YT
Sbjct: 166 VFGLFNVPAKWYAWILLILFQFLASNVSLLGHLSGILSGFAYT 208
>gi|414872101|tpg|DAA50658.1| TPA: hypothetical protein ZEAMMB73_465757 [Zea mays]
Length = 381
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 7/205 (3%)
Query: 9 ELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRD 68
E GI L Q S IP T +ILI ++Y++ +L + IC + +
Sbjct: 8 EAGIPTRLNQWWSS----IPFVTSGVILICGVIYLLCLLIGYDSYVEICFLPSAVASHFQ 63
Query: 69 YKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
R S L HG +H+ +NM++L+ G ELER+ GSV+ + L+ L + ++ ++ +++
Sbjct: 64 VYRFYTSVLFHGSLLHVLFNMLALVPLGTELERIMGSVRLLFLMLLLATTNAILHLTIAF 123
Query: 129 VIYL--MNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELV 185
++ + H + +C+IGFS V+FSM I T S + + F+VPA + WI LV
Sbjct: 124 LVAYNPLYHVPNLVNECSIGFSGVIFSMIVIETSLSGVQSRSVFGLFNVPAKWYAWILLV 183
Query: 186 IIHLMVPNASFKGHLSGILVGLCYT 210
+ + N S GHL GIL G YT
Sbjct: 184 LFQFLASNVSLLGHLCGILSGFAYT 208
>gi|223942663|gb|ACN25415.1| unknown [Zea mays]
gi|414872103|tpg|DAA50660.1| TPA: rhomboid family protein [Zea mays]
Length = 396
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 7/205 (3%)
Query: 9 ELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRD 68
E GI L Q S IP T +ILI ++Y++ +L + IC + +
Sbjct: 8 EAGIPTRLNQWWSS----IPFVTSGVILICGVIYLLCLLIGYDSYVEICFLPSAVASHFQ 63
Query: 69 YKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
R S L HG +H+ +NM++L+ G ELER+ GSV+ + L+ L + ++ ++ +++
Sbjct: 64 VYRFYTSVLFHGSLLHVLFNMLALVPLGTELERIMGSVRLLFLMLLLATTNAILHLTIAF 123
Query: 129 VIYL--MNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELV 185
++ + H + +C+IGFS V+FSM I T S + + F+VPA + WI LV
Sbjct: 124 LVAYNPLYHVPNLVNECSIGFSGVIFSMIVIETSLSGVQSRSVFGLFNVPAKWYAWILLV 183
Query: 186 IIHLMVPNASFKGHLSGILVGLCYT 210
+ + N S GHL GIL G YT
Sbjct: 184 LFQFLASNVSLLGHLCGILSGFAYT 208
>gi|195627118|gb|ACG35389.1| rhomboid family protein [Zea mays]
Length = 396
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 7/205 (3%)
Query: 9 ELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRD 68
E GI L Q S IP T +ILI ++Y++ +L + IC + +
Sbjct: 8 EAGIPTRLNQWWSS----IPFVTSGVILICGVIYLLCLLIGYDSYVEICFLPSAVASHFQ 63
Query: 69 YKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
R S L HG +H+ +NM++L+ G ELER+ GSV+ + L+ L + ++ ++ +++
Sbjct: 64 VYRFYTSVLFHGSLLHVLFNMLALVPLGTELERIMGSVRLLFLMLLLATTNAILHLTIAF 123
Query: 129 VIYL--MNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELV 185
++ + H + +C+IGFS V+FSM I T S + + F+VPA + WI LV
Sbjct: 124 LVAYNPLYHVPNLVNECSIGFSGVIFSMIVIETSLSGVQSRSVFGLFNVPAKWYAWILLV 183
Query: 186 IIHLMVPNASFKGHLSGILVGLCYT 210
+ + N S GHL GIL G YT
Sbjct: 184 LFQFLASNVSLLGHLCGILSGFAYT 208
>gi|414872102|tpg|DAA50659.1| TPA: hypothetical protein ZEAMMB73_465757 [Zea mays]
Length = 390
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 7/205 (3%)
Query: 9 ELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRD 68
E GI L Q S IP T +ILI ++Y++ +L + IC + +
Sbjct: 8 EAGIPTRLNQWWSS----IPFVTSGVILICGVIYLLCLLIGYDSYVEICFLPSAVASHFQ 63
Query: 69 YKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
R S L HG +H+ +NM++L+ G ELER+ GSV+ + L+ L + ++ ++ +++
Sbjct: 64 VYRFYTSVLFHGSLLHVLFNMLALVPLGTELERIMGSVRLLFLMLLLATTNAILHLTIAF 123
Query: 129 VIYL--MNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELV 185
++ + H + +C+IGFS V+FSM I T S + + F+VPA + WI LV
Sbjct: 124 LVAYNPLYHVPNLVNECSIGFSGVIFSMIVIETSLSGVQSRSVFGLFNVPAKWYAWILLV 183
Query: 186 IIHLMVPNASFKGHLSGILVGLCYT 210
+ + N S GHL GIL G YT
Sbjct: 184 LFQFLASNVSLLGHLCGILSGFAYT 208
>gi|212722872|ref|NP_001131556.1| uncharacterized protein LOC100192896 [Zea mays]
gi|194691838|gb|ACF80003.1| unknown [Zea mays]
gi|414872100|tpg|DAA50657.1| TPA: hypothetical protein ZEAMMB73_465757 [Zea mays]
Length = 321
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 101/187 (54%), Gaps = 3/187 (1%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLY 86
IP T +ILI ++Y++ +L + IC + + R S L HG +H+
Sbjct: 22 IPFVTSGVILICGVIYLLCLLIGYDSYVEICFLPSAVASHFQVYRFYTSVLFHGSLLHVL 81
Query: 87 YNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYL--MNHDVTELYQCA 144
+NM++L+ G ELER+ GSV+ + L+ L + ++ ++ +++++ + H + +C+
Sbjct: 82 FNMLALVPLGTELERIMGSVRLLFLMLLLATTNAILHLTIAFLVAYNPLYHVPNLVNECS 141
Query: 145 IGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASFKGHLSGI 203
IGFS V+FSM I T S + + F+VPA + WI LV+ + N S GHL GI
Sbjct: 142 IGFSGVIFSMIVIETSLSGVQSRSVFGLFNVPAKWYAWILLVLFQFLASNVSLLGHLCGI 201
Query: 204 LVGLCYT 210
L G YT
Sbjct: 202 LSGFAYT 208
>gi|302755222|ref|XP_002961035.1| hypothetical protein SELMODRAFT_28081 [Selaginella moellendorffii]
gi|302767114|ref|XP_002966977.1| hypothetical protein SELMODRAFT_17932 [Selaginella moellendorffii]
gi|300164968|gb|EFJ31576.1| hypothetical protein SELMODRAFT_17932 [Selaginella moellendorffii]
gi|300171974|gb|EFJ38574.1| hypothetical protein SELMODRAFT_28081 [Selaginella moellendorffii]
Length = 155
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Query: 28 PPGTLTLILIQTLLYIM-NVLAQPWDSLG-ICISAHTILNQRDYKRLVLSALEHGDDMHL 85
PP T LIL ++Y+ L + S+ +C+S + +L D KRL+LSA H D+ HL
Sbjct: 3 PPVTAALILANVIVYLRPGSLHEVLPSIEEVCLSPYLVLRNFDVKRLLLSAFYHVDEAHL 62
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAI 145
+YNM+SL+ KG +LE GS +F +V+ L+ + V+L ++ + CA+
Sbjct: 63 FYNMISLLWKGVQLEGRMGSPKFASMVALLLGMSHGLMVLLGTLVSTLTDSPAPYTSCAV 122
Query: 146 GFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYA 179
GFSA+LF++K + SP + F VPA +A
Sbjct: 123 GFSALLFALKVVLNHNSP-ANAIVYGFVVPARFA 155
>gi|115454379|ref|NP_001050790.1| Os03g0651100 [Oryza sativa Japonica Group]
gi|62733419|gb|AAX95536.1| Putative Rhomboid family protein [Oryza sativa Japonica Group]
gi|113549261|dbj|BAF12704.1| Os03g0651100 [Oryza sativa Japonica Group]
Length = 222
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 103/187 (55%), Gaps = 11/187 (5%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLG-ICISAHTILNQRDYKRLVLSALEHGDDMHL 85
IP T +ILI +Y++ +L +DS IC + ++ R S + HG +H+
Sbjct: 22 IPFITSGVILICGAIYLVCLLTG-YDSFAEICFLPSVVASRFQVYRFYTSVVFHGSLLHV 80
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYV-----IYLMNHDVTEL 140
+NM++L+ G ELER+ GSV+ + L+ L + ++ +++++++ +Y ++ V E
Sbjct: 81 LFNMLALVPLGTELERIMGSVRLLFLMFLLATTNAIFHLIIAFLAAYNPLYPLHFLVDE- 139
Query: 141 YQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASFKGH 199
C+IGFS V+FSM I T S T + F+VPA + WI LV+ + N S GH
Sbjct: 140 --CSIGFSGVIFSMIVIETSLSGVQTRSVFGLFNVPANWYAWILLVLFQFLASNVSLLGH 197
Query: 200 LSGILVG 206
L GIL G
Sbjct: 198 LCGILSG 204
>gi|255083188|ref|XP_002504580.1| predicted protein [Micromonas sp. RCC299]
gi|226519848|gb|ACO65838.1| predicted protein [Micromonas sp. RCC299]
Length = 381
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 90/162 (55%), Gaps = 15/162 (9%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFL 115
+C+SA I+ + R++ S L +GD+MHL YN+ S + KG LE GS +F L+ L
Sbjct: 95 MCLSAGAIVEAGQFYRILTSFLSYGDEMHLIYNLSSFLWKGANLEIKMGSEKFTKLLIGL 154
Query: 116 IISTS-----VCYVMLSYVIYLMNHDVTELYQ--CAIGFSAVLFSMKTIRTRQSPDVTHQ 168
++ T+ V Y M +Y+ + E Y+ C +G + V F++KTI T
Sbjct: 155 LVCTNAMAVGVMYAMAAYL------GMPEAYRNSCVMGNNGVNFALKTILFADEASNT-S 207
Query: 169 LLNFSVPAVYAPWIELVIIHLMVPN-ASFKGHLSGILVGLCY 209
+L ++P+ +A W EL +++LM P+ A H+ GILVGL Y
Sbjct: 208 MLGITMPSKWASWAELGLMYLMYPHTAGLVVHVCGILVGLAY 249
>gi|224091513|ref|XP_002309277.1| predicted protein [Populus trichocarpa]
gi|222855253|gb|EEE92800.1| predicted protein [Populus trichocarpa]
Length = 410
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 103/191 (53%), Gaps = 11/191 (5%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSL-GICISAHTILNQRDYKRLVLSALEHGDDMHL 85
IP T ++++ ++Y++ +L +DS IC +++ R+ S HG +H+
Sbjct: 22 IPFLTSAVVVVCGVIYLVCLLIG-YDSFYEICFLPTAVVSHFQVYRIYTSIFFHGSLLHV 80
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQ--- 142
+NM++L+ G ELER+ GS++ L+ L + ++ ++ ++ L+ H+ YQ
Sbjct: 81 LFNMLALVPLGSELERIMGSIRLAYLIILLATTNAIFHL---FIALLVAHNPFHPYQYLL 137
Query: 143 --CAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASFKGH 199
CAIGFS +LFSM I T S + + F+VPA + +I LV L++ N S GH
Sbjct: 138 DECAIGFSGILFSMIVIETSLSGVQSRSVFGLFNVPAKWYAFILLVAFQLLMTNVSLLGH 197
Query: 200 LSGILVGLCYT 210
L GIL G YT
Sbjct: 198 LCGILSGFAYT 208
>gi|440800861|gb|ELR21891.1| peptidase, S54 (rhomboid) subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 342
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Query: 52 DSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL 111
+ +CI ++ Q RL+ + H +H+ NM++ LER GS F L
Sbjct: 44 NDFSVCIFPPNVIEQFQVYRLLTAGFFHVGFLHVVMNMLAFQALAPSLERAMGSFTFSYL 103
Query: 112 VSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN 171
V + +S+ LS V+Y QC IG S+VLFS +R+ L
Sbjct: 104 VVLFQVVSSLMNTFLSLVLYKTGAYPDAWNQCTIGLSSVLFSFLVLRSHLHQSHNMSLFG 163
Query: 172 F-SVPAVYAPWIELVIIHLMVPNASFKGHLSGILV 205
F SVPA + PW+ LV+ ++P SF GHL+GILV
Sbjct: 164 FVSVPAQWYPWVLLVLFQFLMPEVSFLGHLTGILV 198
>gi|42572467|ref|NP_974329.1| rhomboid-like protein 14 [Arabidopsis thaliana]
gi|332642457|gb|AEE75978.1| rhomboid-like protein 14 [Arabidopsis thaliana]
Length = 239
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
Query: 89 MVSLIVKGRELERMFGSVQFVVLVSFLI-ISTSVCYVMLSYVIYLMNHDVTELYQCAIGF 147
M+SL+ KG +LE GS +F +V LI +S V ++ ++ L ++D + A+GF
Sbjct: 1 MMSLLWKGIKLETSMGSSEFASMVFTLIGMSQGVTLLLAKSLLLLFDYDRAYYNEYAVGF 60
Query: 148 SAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGL 207
S VLF+MK + Q+ D + + VP YA W EL+++ + VPNASF GHL GIL G+
Sbjct: 61 SGVLFAMKVVLNSQAEDYS-SVYGILVPTKYAAWAELILVQMFVPNASFLGHLGGILAGI 119
Query: 208 CY 209
Y
Sbjct: 120 IY 121
>gi|294460477|gb|ADE75816.1| unknown [Picea sitchensis]
Length = 410
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 103/191 (53%), Gaps = 11/191 (5%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSL-GICISAHTILNQRDYKRLVLSALEHGDDMHL 85
+P T L+ + ++Y++ +L +DS IC ++ + R+ S + HG +H+
Sbjct: 22 VPFITSGLVAVCGIIYLVCLLVG-YDSFYAICFWPAQLILRLQVYRIYTSVVFHGSVLHV 80
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY---- 141
+NM++L+ G LER+ GSV+++ + L +V +++++ YL H+ Y
Sbjct: 81 MFNMMALVPIGSGLERIMGSVRYLHVTLLLATCNAVLHLLIA---YLAAHNPVHPYPFFM 137
Query: 142 -QCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASFKGH 199
+C IGFS ++F+M + T + + + + F+VP + I L++ L++PN S GH
Sbjct: 138 DECTIGFSGIIFAMIVMETSLNGNQSRSVFGLFNVPGKWYASILLILFQLLMPNVSLLGH 197
Query: 200 LSGILVGLCYT 210
L GIL G YT
Sbjct: 198 LCGILSGFAYT 208
>gi|301122517|ref|XP_002908985.1| serine protease family S54, putative [Phytophthora infestans T30-4]
gi|262099747|gb|EEY57799.1| serine protease family S54, putative [Phytophthora infestans T30-4]
Length = 298
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 116/246 (47%), Gaps = 25/246 (10%)
Query: 12 ILLLLYQVLSVGFHLIPPGTLTLI-LIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYK 70
+L+L+ Q+ + PP TL L+ L+ L + + + +C +L+ D
Sbjct: 26 LLMLMQQIQQL--ERKPPVTLGLMALMYGLHFQKEQSPELFSPYSLCPD--RVLSHWDLT 81
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
R+V S L H DD HLY+NMVS + KG LE GSV+F++ V +L++ V V+++ V
Sbjct: 82 RIVASGLIHVDDWHLYHNMVSFLWKGCNLEYKMGSVRFLLTVVYLLVLCHVLVVVVALV- 140
Query: 131 YLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLM 190
A F M + SP + + F VP YA W+ELV+IH +
Sbjct: 141 -----------------LATGFQMPVLLNHNSPAFS-SVYGFQVPTKYAAWLELVVIHFL 182
Query: 191 VPNASFKGHLSGILVGLCYTETSLGRLVERSGRSV-SRVVNTLTNVFKLDDDCNGDDEDS 249
VP +SF GH+ GIL G + +S+ + V SG SR + + D
Sbjct: 183 VPRSSFIGHMCGILAGYLFVYSSVMQSVMTSGAGAFSRWLRAVAGPTYYRHDTPPPRYSR 242
Query: 250 DTSASF 255
++SF
Sbjct: 243 PPTSSF 248
>gi|242057069|ref|XP_002457680.1| hypothetical protein SORBIDRAFT_03g011560 [Sorghum bicolor]
gi|241929655|gb|EES02800.1| hypothetical protein SORBIDRAFT_03g011560 [Sorghum bicolor]
Length = 342
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 12/147 (8%)
Query: 67 RDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVML 126
RD+K LS H +++HL+ NM +L+ G ELE G+ V + L++S
Sbjct: 62 RDWKTFFLSPWCHTNEVHLFSNMTTLLWTGVELETSMGTAWPVTGCAILLLSKGC----- 116
Query: 127 SYVIYLMNHDVTELYQCAIGFSAVLFSMKTI----RTRQSPDVTHQLLNFSVPAVYAPWI 182
+ L+ + + IGFS VLF +K + +S D H +PA YA W
Sbjct: 117 ---LSLVGNGAPYYDEFCIGFSGVLFGIKAVSMSAHAAESGDFLHLAGMVVIPAKYAVWA 173
Query: 183 ELVIIHLMVPNASFKGHLSGILVGLCY 209
EL+++ ++PN SF GHL GIL G Y
Sbjct: 174 ELLLVQALMPNTSFVGHLGGILAGHVY 200
>gi|412991448|emb|CCO16293.1| predicted protein [Bathycoccus prasinos]
Length = 388
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 10/214 (4%)
Query: 24 FHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICI-----SAHTILNQRDYKRLVLSALE 78
+ +P T + I ++ N + + + +C+ L Q + R+ SA
Sbjct: 18 YQQLPMTTRCVFTINVFAFLFNAILRLFSYSTLCLIPALMRGGDFLGQ--FYRIFTSAFT 75
Query: 79 HGDDMHLYYNMVSLIVKGR-ELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDV 137
HG HL NM + I G LE GSV F +LV I +V+L+ ++ +
Sbjct: 76 HGSFFHLLVNMCAFIQIGAYGLEMKLGSVNFALLVFLFTILCGTTHVLLASGMWYLLGMS 135
Query: 138 TELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASF 196
+CA+GFS V+FS+ + T S + F V A P+ + I+ L+ PN+SF
Sbjct: 136 GYQNECAVGFSGVIFSLVVLDTAFSNIRQRDVFGLFVVNAYMYPFALIAIVQLLAPNSSF 195
Query: 197 KGHLSGILVGLCYTETSLGRLVERSGRSVSRVVN 230
GHLSG++VG Y + L +L+ S R+V R+ N
Sbjct: 196 LGHLSGVVVGSLYVKGYLNKLIP-SERAVDRIEN 228
>gi|384252274|gb|EIE25750.1| rhomboid-domain-containing protein, partial [Coccomyxa
subellipsoidea C-169]
Length = 286
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 2/197 (1%)
Query: 20 LSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEH 79
+ + F IP T +++++ +YI +L D +C++ H ++ + RL SA H
Sbjct: 12 VKIWFDAIPLVTRSVLVLCVGVYIFGLLTGFDDHAAVCLNPHILVERFQVFRLFTSAFFH 71
Query: 80 GDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDV-T 138
+H+ +NM++ + LER GS+Q + L+ LI+ + Y+ SY+ + D +
Sbjct: 72 AGLLHIGFNMLAFVPVAMSLERQLGSLQTLHLLLMLILVGDIFYISASYLASFVLADARS 131
Query: 139 ELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASFK 197
L CAIG S +F + + S T + F+V A + PW LV L++P SF
Sbjct: 132 YLASCAIGLSGAIFGLIVVDNACSGAQTRSIFGMFTVSAKWYPWALLVFWQLLMPGVSFL 191
Query: 198 GHLSGILVGLCYTETSL 214
GHL G+L G Y L
Sbjct: 192 GHLGGVLAGQAYVWGWL 208
>gi|299473184|emb|CBN78760.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 317
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 82/142 (57%), Gaps = 2/142 (1%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
+Y R++ AL HG MH+ +NM+S + G LE FG++ + + + +I V +
Sbjct: 53 EYYRVITGALLHGGLMHIVFNMMSFLSIGSSLEVAFGTLSLLFTILWSMILAGVVHCGAE 112
Query: 128 YVIYL-MNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELV 185
+V+ + + HD T + Q ++GFS V+F++ + + +S T + VP PW+ LV
Sbjct: 113 WVMTVWVTHDPTYVNQPSVGFSGVIFTLALMESYRSTQPTRSVFGMMRVPTRMYPWVLLV 172
Query: 186 IIHLMVPNASFKGHLSGILVGL 207
++ + + + SF GHLSGILVG+
Sbjct: 173 LLSVFMRDISFVGHLSGILVGV 194
>gi|361067743|gb|AEW08183.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
Length = 159
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 99 LERMFGSVQFVVLVSFLI-ISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTI 157
LERM GS +F +V+ L+ +S + V + ++ +CA+GFSAVLF++K +
Sbjct: 1 LERMMGSTEFASMVAVLLGLSHGIVVVTAKVLATFFDYPYPLTSECAVGFSAVLFALKVV 60
Query: 158 RTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
S D T+ VPA YA W EL++I + VP SF GHLSGI G+ Y
Sbjct: 61 LNSSSSDPTYVYGGVVVPARYAAWAELLLIQMFVPGVSFIGHLSGIFAGILY 112
>gi|301122523|ref|XP_002908988.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099750|gb|EEY57802.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 269
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 109/205 (53%), Gaps = 16/205 (7%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSL--GICISAHTILNQRDYKRLVLSALEHGDDMHL 85
PP TL L+ I +Y+++V A+ SL + + ++ ++L+ H ++++L
Sbjct: 42 PPVTLALMGI---MYLLHVQAKRMPSLLLSYALCPGKVAANKEIGAVILAPFIHSEELYL 98
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAI 145
+S + KG +LE GS+ F +L+ +LI+ V +++ + ++++ T+ +C
Sbjct: 99 ----LSFLWKGYKLEGRLGSIGFCILLVYLIV---VSQLLIVFGAHMISMGATQ--ECFT 149
Query: 146 GFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILV 205
GFS VL +MK I SP T +L +F +P YA W+EL+I +L+VP +G++
Sbjct: 150 GFSGVLTAMKVILNVNSPTFT-KLYSFKIPTKYAAWLELLITYLLVPKLPLLAQAAGLVA 208
Query: 206 GLCYTETSLGR-LVERSGRSVSRVV 229
G Y T LV + R V R++
Sbjct: 209 GYIYVVTPNAEALVGCASRHVHRLL 233
>gi|402584901|gb|EJW78842.1| hypothetical protein WUBG_10251 [Wuchereria bancrofti]
Length = 153
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 88/150 (58%), Gaps = 11/150 (7%)
Query: 7 RRE--LGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYI--MNVLAQPWDSLGICISAHT 62
RR+ GI LL YQ+ + + IPP TL +I+ Q +++ L Q + +C+
Sbjct: 8 RRQNNYGIYLLAYQLFNSRY--IPPVTLAVIIFQMAIFLGYFPFLGQH-RTEAMCLLPSR 64
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
IL + ++ R++ S + H DDMHLY+NM+SL+ KGR LE GS +F++L++ ++T+
Sbjct: 65 ILYRSEWLRMLASTVMHVDDMHLYFNMISLLWKGRRLEPWLGSNRFLLLLAVFAVATNCT 124
Query: 123 YVMLSYV---IYLMNHDVTELYQCAIGFSA 149
V LSY+ ++ N + QCA+GFS
Sbjct: 125 MVGLSYLADEVFSFNGG-GYMNQCAVGFSG 153
>gi|361067741|gb|AEW08182.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176329|gb|AFG71694.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176331|gb|AFG71695.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176333|gb|AFG71696.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176335|gb|AFG71697.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176337|gb|AFG71698.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176339|gb|AFG71699.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176341|gb|AFG71700.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176343|gb|AFG71701.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176345|gb|AFG71702.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176347|gb|AFG71703.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176349|gb|AFG71704.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176351|gb|AFG71705.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176353|gb|AFG71706.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176355|gb|AFG71707.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176357|gb|AFG71708.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176359|gb|AFG71709.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176361|gb|AFG71710.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
Length = 158
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
Query: 99 LERMFGSVQFVVLVSFLI-ISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTI 157
LERM GS +F +V+ L+ +S + V + ++ +CA+GFSAVLF++K +
Sbjct: 1 LERMMGSTEFASMVAVLLGLSHGIVVVTAKVLATFFDYPYPLTSECAVGFSAVLFALKVV 60
Query: 158 RTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
SP++T+ + VPA +A W EL++I + VP SF GHLSGI G+ Y
Sbjct: 61 LNSNSPNLTN-VYGVVVPARHAAWAELLLIQMFVPGVSFLGHLSGIFAGILY 111
>gi|154421477|ref|XP_001583752.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
gi|121917995|gb|EAY22766.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
Length = 289
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 118/250 (47%), Gaps = 12/250 (4%)
Query: 27 IPPGTLTLILIQTLLYIMNV-LAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHL 85
+P GT L++ LL+I + L P + ++ ++ Q +Y R+ S H D +HL
Sbjct: 8 LPFGTKYLLIFMILLHIAKITLMPPLFMQKLYLNPFLVIKQNEYWRIFTSQYVHADIIHL 67
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAI 145
NM++ G ER G++ F + + +++ ++++ + A+
Sbjct: 68 AMNMMTFYQLGNFFERSVGTIAFFYYIFIFGVLSNLLDCLIAWFMAWGGRP-EHFIGSAV 126
Query: 146 GFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASFKGHLSGIL 204
GFS VLFS+ I + SP ++ F VP + PW L+ + +++P+AS GH +G++
Sbjct: 127 GFSGVLFSLTVIDSAVSPGSQRSVMGLFLVPKDFYPWALLLFMSIIIPSASLLGHATGMV 186
Query: 205 VGLCYTETSLGRLVERSGRSVSRVVNTLT------NVFKLDDDCNGDDEDSDTSASFLDF 258
+G Y L LV S + S++ L N + ++ NG ++ A F +
Sbjct: 187 MGYLYIFGLLKWLVP-SKETFSKIERKLCCCALNHNGYYAAEN-NGANQ-YQPYALFNNL 243
Query: 259 TDNTKNDAAT 268
NT+ND A
Sbjct: 244 AGNTENDDAA 253
>gi|18419592|gb|AAL69367.1|AF462204_1 unknown [Narcissus pseudonarcissus]
Length = 161
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 80/145 (55%), Gaps = 7/145 (4%)
Query: 28 PPGTLTLILIQTLLYI----MNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDM 83
PP T LIL L+Y+ ++ + D IC + H IL D +RL LSA H +
Sbjct: 8 PPVTAGLILTNALIYLRPGALDRILPTVDE--ICFNPHLILKHGDLRRLFLSAFYHMGES 65
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVLVSFLI-ISTSVCYVMLSYVIYLMNHDVTELYQ 142
HL YNM+SL+ KG +LE GS++F +V+ L+ +S + ++ ++ ++ Q
Sbjct: 66 HLVYNMMSLLWKGIQLETFMGSLEFASMVAALLGLSQGMTLLLAKSLLVFFDYGTPYYNQ 125
Query: 143 CAIGFSAVLFSMKTIRTRQSPDVTH 167
++GFS VLF+MK + Q+ D T+
Sbjct: 126 YSVGFSGVLFAMKVVLNSQADDYTY 150
>gi|357128028|ref|XP_003565678.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
At3g17611-like [Brachypodium distachyon]
Length = 312
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 62 TILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSV 121
T+L D +R SA H ++HL NM SL+ G ELE GS +F +V+FL+ +
Sbjct: 74 TLLQYGDLRRFFSSAFYHVSELHLLMNMTSLLSAGDELETSMGSFEFASMVAFLLGLSKG 133
Query: 122 CYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPW 181
++LS + L+ ++ +Q + GFS VLF M DV L P YA
Sbjct: 134 FTILLSKSLLLLGNNSAYYHQHSAGFSGVLFGM---------DVVLNDLAGEGPEKYAVC 184
Query: 182 IELVIIHLMVPNASFKGHLSGILVGLCY 209
L++ +++P ASF GHL GIL GL Y
Sbjct: 185 ARLLLTQVLIPEASFIGHLGGILAGLTY 212
>gi|66813132|ref|XP_640745.1| hypothetical protein DDB_G0281359 [Dictyostelium discoideum AX4]
gi|60468764|gb|EAL66765.1| hypothetical protein DDB_G0281359 [Dictyostelium discoideum AX4]
Length = 343
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 116/216 (53%), Gaps = 17/216 (7%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQP-WDSLGICISAHTILNQ--RDYKRLVLSALEHGDDM 83
IP T + +I ++L+ ++++A + S C+S ++ N + R++LS H
Sbjct: 36 IPLATKVISIICSILFALSLVAPSMFGSYKTCLSIESLTNSFLDNLYRIILSNFAHLSIY 95
Query: 84 HLYYNMVSLIVKGRELERM-FGSVQ-FVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
H+ YNM++ + + LER+ FG+++ F +L F II+ +C ++ ++ ++V
Sbjct: 96 HIVYNMITFLDLAK-LERLTFGTLKYFYLLFLFGIITNLICL----FIYFIGRNNV---- 146
Query: 142 QCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLS 201
C +GFS VLF++ I + S +P+ PW L++ H+ VP +SF GH S
Sbjct: 147 -CHLGFSGVLFALIYIESNSSGRDVFLFNAVKIPSKLYPWAMLILAHVFVPRSSFIGHFS 205
Query: 202 GILVGLCYTETSLGRLVERSGRSVSRVVNT-LTNVF 236
GI+VG+ + + L + S + +S + ++ L N+F
Sbjct: 206 GIVVGILFIKGYLDIFI-LSNQKLSEIESSQLMNIF 240
>gi|405975233|gb|EKC39814.1| Serine/threonine-protein kinase RIO2 [Crassostrea gigas]
Length = 670
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 143 CAIGFSAVLFSMKTIRTRQSPDVTHQLLNF-SVPAVYAPWIELVIIHLMVPNASFKGHLS 201
CA+GFS V+F++K + T SP T L+ F VP+ Y W ELV I ++ PN SF GHL+
Sbjct: 504 CAVGFSGVIFALKVLVTHYSPSGTQYLMGFIPVPSKYIFWAELVFIQMITPNVSFVGHLA 563
Query: 202 GILVGLCYTETSL 214
GILVGL YT+ L
Sbjct: 564 GILVGLLYTKGPL 576
>gi|219112025|ref|XP_002177764.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410649|gb|EEC50578.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 304
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 78/137 (56%), Gaps = 1/137 (0%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
R+ SAL HG+ MHL NM++ + G LE+ FG+ + ++++ + I+ T + Y+ ++ +
Sbjct: 55 RIATSALFHGNIMHLAMNMMTTLAIGSLLEKRFGTFRLLLIILWSILLTGILYIGIALFL 114
Query: 131 YLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHL 189
++ + Q ++GFS V+F + + + + + F VP+ PW+ LV + +
Sbjct: 115 AIIIQKNQLMRQHSVGFSGVIFHLSVLESNLGTHQSRSVFGFFDVPSYLYPWVLLVGLQI 174
Query: 190 MVPNASFKGHLSGILVG 206
+P SF GHL GILVG
Sbjct: 175 FMPGLSFTGHLVGILVG 191
>gi|326524840|dbj|BAK04356.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 333
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 91/185 (49%), Gaps = 7/185 (3%)
Query: 28 PPGTLTLILIQTLLYIMN--VLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHL 85
PP T LI L+Y+ V A + + H I+ D +R LSA H + H
Sbjct: 36 PPVTAALIAANALVYLRPGAVDAHLPRLRHVMFNPHLIIKFSDLRRFFLSAFYHLSEGHF 95
Query: 86 YYNMVSLIVKGRELERMFGSVQFV-VLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCA 144
+ NM SL+ G +LE GS +F ++VS L +S ++ ++ L N D+ YQ +
Sbjct: 96 FMNMASLLHTGVKLETSMGSPEFASMVVSLLGLSQGFTLLLSKGLLLLGN-DMA-YYQYS 153
Query: 145 IGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGIL 204
GFS VL M + + +V Q SVP+ YA +EL++IH P A ++ GIL
Sbjct: 154 AGFSGVLLGMNVVLNAREGNVVWQ--GVSVPSKYAALLELLVIHAFNPEAHLVCNVGGIL 211
Query: 205 VGLCY 209
GL Y
Sbjct: 212 AGLAY 216
>gi|149016258|gb|EDL75504.1| hypothetical LOC316557, isoform CRA_a [Rattus norvegicus]
gi|149016260|gb|EDL75506.1| hypothetical LOC316557, isoform CRA_a [Rattus norvegicus]
Length = 187
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 143 CAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSG 202
CA+GFS VLF++K + P +L F VP +A W EL IH P SF GHL+G
Sbjct: 10 CAVGFSGVLFALKVLSNHYCPGGFVNILGFPVPNRFACWAELAAIHFCTPGTSFAGHLAG 69
Query: 203 ILVGLCYTETSLGRLVE 219
ILVGL YT+ L ++++
Sbjct: 70 ILVGLMYTQGPLKKIMD 86
>gi|149016259|gb|EDL75505.1| hypothetical LOC316557, isoform CRA_b [Rattus norvegicus]
gi|149016261|gb|EDL75507.1| hypothetical LOC316557, isoform CRA_b [Rattus norvegicus]
Length = 168
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 47/78 (60%)
Query: 142 QCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLS 201
CA+GFS VLF++K + P +L F VP +A W EL IH P SF GHL+
Sbjct: 9 NCAVGFSGVLFALKVLSNHYCPGGFVNILGFPVPNRFACWAELAAIHFCTPGTSFAGHLA 68
Query: 202 GILVGLCYTETSLGRLVE 219
GILVGL YT+ L ++++
Sbjct: 69 GILVGLMYTQGPLKKIMD 86
>gi|403374294|gb|EJY87090.1| hypothetical protein OXYTRI_06350 [Oxytricha trifallax]
Length = 256
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 87/159 (54%), Gaps = 9/159 (5%)
Query: 55 GICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSF 114
IC++ +L+ + + R+V S HG+ H+++NM L+V G E+E+ +G++ + ++ +
Sbjct: 9 AICLAP--VLDYQQFYRIVTSEFSHGNVAHIFFNMCGLLVFGVEVEKTYGTLYYAMINFW 66
Query: 115 LIISTSVC----YVMLSYVIYLMNHDVTE-LYQCAIGFSAVLFSMKTIRTRQSPDVTHQL 169
L++ +++ ++++++VI T+ + C +G+S +LF + I + D
Sbjct: 67 LMMISNILSLAFFMLMAFVIPEEYRGGTQNFFYCGVGYSNILFGLSIIFAYKG-DTQQNF 125
Query: 170 LNF-SVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGL 207
+ Y PW +++I + N+SF GH G++ GL
Sbjct: 126 MGLCKFEKKYVPWFYMILIFFTIENSSFIGHFLGMITGL 164
>gi|167523737|ref|XP_001746205.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775476|gb|EDQ89100.1| predicted protein [Monosiga brevicollis MX1]
Length = 280
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 78/142 (54%), Gaps = 6/142 (4%)
Query: 18 QVLSVGFHLIPPGTLTLILIQTLLYIMNVLAQ----PWDSLGICISAHTILNQRDYKRLV 73
QV+ +G IPP TL L + T+++ +++LA P C+ I+ + + RL
Sbjct: 80 QVMQIGIENIPPATLFLFGLNTVVH-LDLLAPLGIYPPPIQASCLLPAAIVEGQAWLRLF 138
Query: 74 LSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLM 133
+ H HLYYNMVSL+ KGR+LE G+ + ++L + + ++ + L+Y+++L
Sbjct: 139 WPVILHTSSYHLYYNMVSLLYKGRKLEPRLGTERMLMLTALFGVGGNMLHTGLAYLLHLA 198
Query: 134 NHDVTELYQCAIGFSAVLFSMK 155
C++GFS VLF++K
Sbjct: 199 GF-YDSYVSCSVGFSGVLFALK 219
>gi|412988172|emb|CCO17508.1| predicted protein [Bathycoccus prasinos]
Length = 329
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 108/222 (48%), Gaps = 26/222 (11%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSLG----ICISAHTILNQRDYKRLVLSALEHGDDM 83
P GTL ++ + Y V D +G C S +L + +R + S+ HGD++
Sbjct: 38 PHGTLVVMAVMASYY-FEVFPLLNDIIGDISSACFSPAKVLRDFELQRTLFSSFVHGDEL 96
Query: 84 HLYYNMVSLIVKGRELERMFG--SVQFVVLVSFLIISTSVCYVMLSYVIY---LMNHDVT 138
HL YN+ SL+ KG +LE +G + +FV+L + + T +++ ++ L + DV
Sbjct: 97 HLAYNLSSLLTKGIKLEERYGGKAEKFVLLFCLVSVLTHGFAAIIAGGLFHSGLFDGDV- 155
Query: 139 ELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNA-SFK 197
Y G S VLF+++TI ++P + VPA E+ +++LM P+ +
Sbjct: 156 -YYNATYGSSGVLFALQTIVLGENPRGNYSFFGLQVPAHRLALTEVGLLYLMNPSTLNLI 214
Query: 198 GHLSGILVGLCYTETSLGRLVERSGRSVSRVVNTLTNVFKLD 239
H+SGIL G+ LV R ++V+N L +F +
Sbjct: 215 VHVSGILAGM---------LVLRP----TKVINMLKYIFGFN 243
>gi|307109842|gb|EFN58079.1| hypothetical protein CHLNCDRAFT_142374 [Chlorella variabilis]
Length = 727
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 105/212 (49%), Gaps = 20/212 (9%)
Query: 7 RRELGILLLLYQVLS--VGFH-LIPPGTLTLILIQTLLYIMNVLAQPWDSLG---ICISA 60
RR GI+ +L+ G+ L P T L L+ T+ Y L Q W LG + +S
Sbjct: 433 RRSRGIIPFWPSMLAKLTGYQALAQPATSALALLLTVAY---ALIQ-WRHLGYPDVGLSY 488
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFL-IIST 119
++ R+ R S L H D +HL +N+ +L G +ER G++ ++ + L ++S
Sbjct: 489 DRVVVHRELWRTAASQLAHIDLVHLAFNLSALWSIGL-VERTLGTLHYLQHTALLFLLSP 547
Query: 120 SVCYVMLSYVIYLMNHDVTELYQ--CAIGFSAVLFSMKTIRTRQSPDVTHQLLNF---SV 174
++C ++ +I + E Y+ A+G+S VLF ++ P L F S+
Sbjct: 548 AICILIYHLLIVVGQR---EQYREVTAVGYSCVLFGWMSLMATSKPGGITMLPVFGLASI 604
Query: 175 PAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
P PW L+I L++P ASF GHL+G+L G
Sbjct: 605 PLWATPWASLLITSLLIPRASFVGHLAGMLAG 636
>gi|255080834|ref|XP_002503990.1| predicted protein [Micromonas sp. RCC299]
gi|226519257|gb|ACO65248.1| predicted protein [Micromonas sp. RCC299]
Length = 183
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 9/185 (4%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYY 87
P +L + L + Y +N ++ +G+ S ++ R+Y R + ++ H +HL +
Sbjct: 1 PITSLVIALCSGVWYFLNSKGLGYEEVGV--SYAKVVRDREYWRCLTASFSHISPLHLLF 58
Query: 88 NMVSLIVKG-----RELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQ 142
NM SL G R +GS +V +++ T ++ +V+ M H+ E
Sbjct: 59 NMSSLWSLGVVEQMRGRGEGWGSGWYVRYTLVMLVGTMALVILSYHVLVRMGHERYERVT 118
Query: 143 CAIGFSAVLFSMKTIRTRQSPDVTHQLLNF-SVPAVYAPWIELVIIHLMVPNASFKGHLS 201
A+G+S V+F T+ + + P + LL + +P AP+ L+ ++VP ASF GHL+
Sbjct: 119 -AVGYSCVVFGWMTVLSVRQPTSSLSLLGYIQLPVNLAPFGSLIFTSVVVPQASFVGHLA 177
Query: 202 GILVG 206
GI+VG
Sbjct: 178 GIVVG 182
>gi|330801370|ref|XP_003288701.1| hypothetical protein DICPUDRAFT_98105 [Dictyostelium purpureum]
gi|325081264|gb|EGC34786.1| hypothetical protein DICPUDRAFT_98105 [Dictyostelium purpureum]
Length = 382
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 90/166 (54%), Gaps = 6/166 (3%)
Query: 56 ICISAHTILNQ--RDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELER-MFGSVQFVVLV 112
+C+S + +L+ + ++ S H + +H+ +NM++ I G LE+ FG++QF L+
Sbjct: 64 VCLSPYYLLSHPLSNAYTIITSNYFHINILHILFNMLAFIPLGSRLEKSKFGTLQFFYLI 123
Query: 113 SFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVT-HQLLN 171
I + +LS + N Y C++GFS ++FS+ I + V+ + + N
Sbjct: 124 VLFSILIPLMTTVLSVIGLYTNITRFGYYSCSVGFSGIVFSLLEIEFFEDRLVSLYGITN 183
Query: 172 FSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRL 217
+P+ P+ L I +L+ P++SF GHLSGI VGL + + +L L
Sbjct: 184 --IPSKLYPFAILFITYLIFPSSSFLGHLSGIFVGLLFVKGNLSFL 227
>gi|159470379|ref|XP_001693337.1| predicted protein [Chlamydomonas reinhardtii]
gi|158277595|gb|EDP03363.1| predicted protein [Chlamydomonas reinhardtii]
Length = 249
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 72/133 (54%), Gaps = 7/133 (5%)
Query: 77 LEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHD 136
LEH HL+YNM SL+ KG +LE +G F LV+ L++ + +L+ +
Sbjct: 71 LEH----HLFYNMGSLLWKGAQLESRYGHWGFAALVAELLLLSHGLTALLAAALAAGFPG 126
Query: 137 VTELYQ--CAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNA 194
LY CA+GFSAVLF++K + P + ++ F +P Y W ELV+ + P A
Sbjct: 127 YRYLYWDTCAVGFSAVLFALKVVLNYNQPGNS-SIMGFELPTKYLCWAELVLASYLTPQA 185
Query: 195 SFKGHLSGILVGL 207
F GHL GIL GL
Sbjct: 186 CFIGHLGGILAGL 198
>gi|357128026|ref|XP_003565677.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
At3g17611-like [Brachypodium distachyon]
Length = 322
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 62 TILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSV 121
T+L D +R A H ++ HL NM SL+ G +LE GS +F +V+ L+ +
Sbjct: 74 TLLQYGDLRRFFFPAFYHANEFHLLQNMTSLLWTGDQLETSXGSFKFASMVASLLGLSKG 133
Query: 122 CYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTI---RTRQSPDVTHQLLNFSVPAVY 178
++LS L+ +D Q IGFS VLF M + + P++ L
Sbjct: 134 FTILLSEGFLLLGNDKAYYQQHYIGFSGVLFGMDVVLNDSVGEGPEMCAVFLC------- 186
Query: 179 APWIELVIIHLMVPNASFKGHLSGILVGL 207
L++I ++P ASF HL GIL GL
Sbjct: 187 ---ANLLLIQDLIPEASFIAHLGGILAGL 212
>gi|308806321|ref|XP_003080472.1| Rhomboid family proteins (ISS) [Ostreococcus tauri]
gi|116058932|emb|CAL54639.1| Rhomboid family proteins (ISS) [Ostreococcus tauri]
Length = 350
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 3/195 (1%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYY 87
P T T++++ + V D +G+C + Y R+ S HG+ H+ +
Sbjct: 15 PLATTTIVVVMFVALASRVAIGANDFVGVCAVPKIAFHWTAYYRVYTSIFTHGNLPHVIF 74
Query: 88 NMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGF 147
N ++ + G LER G+ F L L++ +Y + CA+G
Sbjct: 75 NALAFVSTGGNLERSVGTFHFAWLFVTFAHVAYFASAALAWGLYFGLGYTQGILTCAVGM 134
Query: 148 SAVLFSMKTIRTRQSPDVTHQLLN--FSVPAVYAPWIELVIIHLMVPNASFKGHLSGILV 205
S V+F++ T + DV + + F V + + P LV+I LM+P SF GH G++
Sbjct: 135 SGVIFALIVCETNYT-DVGRRSVFGLFDVASEWYPLALLVLIQLMIPGVSFLGHAGGVVC 193
Query: 206 GLCYTETSLGRLVER 220
G Y + L L+ R
Sbjct: 194 GWMYVKGYLNFLLLR 208
>gi|303271301|ref|XP_003055012.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462986|gb|EEH60264.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 231
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 2/189 (1%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLY 86
+P GT + I Y++ VL D C++ +L + R + + HG +HL
Sbjct: 15 LPFGTRGVFTICVASYVLCVLVGFDDFARACVAPRHVLATGEVYRALTAPFFHGSLLHLA 74
Query: 87 YNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIG 146
NM + + LER G+ QF ++V + + +V L+ L+ + +CAIG
Sbjct: 75 LNMTAFVGTASGLERSLGTTQFALIVLLFALVAAAYHVALATAAALVGFTGAPM-ECAIG 133
Query: 147 FSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASFKGHLSGILV 205
S ++F + + T S + F VP+ + P L+ I ++ P SF GH +G+L
Sbjct: 134 LSGIIFGLIVVDTHLSAIERRSVFGFFDVPSGWYPLGLLLFIQVIAPAVSFLGHAAGLLA 193
Query: 206 GLCYTETSL 214
GL Y L
Sbjct: 194 GLTYVRGYL 202
>gi|397569632|gb|EJK46866.1| hypothetical protein THAOC_34449 [Thalassiosira oceanica]
Length = 246
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 96 GRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMK 155
G LER G++ + + F I+ T Y+ +S++++ + + Q A GFS V+F +
Sbjct: 4 GSSLERQIGTIMMALTIFFGILLTGAIYISISWLLFAVFGLEKMMLQHAAGFSGVIFQLS 63
Query: 156 TIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
+ + SP+ T + F+V + PW LV I L++P+ SF GHLSGIL+G
Sbjct: 64 VLESNLSPNRTRSVFGVFTVSSRMYPWALLVAIQLVMPHISFLGHLSGILIG 115
>gi|281204487|gb|EFA78682.1| methionyl-tRNA synthetase beta subunit [Polysphondylium pallidum
PN500]
Length = 400
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 15/154 (9%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFL 115
+C S IL+ ++ +L SA H +H+ +NM S I +L+ + + V L+SF
Sbjct: 87 LCSSPTNILD-LNFSKLA-SAFTHSGILHILFNMSSFI----QLKSLESTNVLVSLMSF- 139
Query: 116 IISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP 175
I+ + Y L+Y+ LY C++G S V+F++ I+ S T+ +P
Sbjct: 140 AIAFLISYPPLNYM--------NSLYTCSVGLSGVIFALLEIQCYGSIHSTNLFAQIQIP 191
Query: 176 AVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
PW L++ ++PN SF GHLSGI++G Y
Sbjct: 192 LKLYPWAALLLAQFLMPNVSFIGHLSGIIIGFLY 225
>gi|170576544|ref|XP_001893672.1| MGC84665 protein [Brugia malayi]
gi|158600200|gb|EDP37503.1| MGC84665 protein, putative [Brugia malayi]
Length = 169
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFL 115
+C+ IL + ++ R++ S + H DDMHLY+NM+SL+ KGR LE GS +F++L++
Sbjct: 1 MCLLPSRILYRCEWLRMLASTIMHVDDMHLYFNMISLLWKGRRLEPWLGSNRFLLLLAVF 60
Query: 116 IISTSVCYVMLSYV---IYLMNHDVTELYQCAIGFSA 149
++TS V LSY+ ++ N + QCAIGFS
Sbjct: 61 AVATSSTMVGLSYLADEVFSFNGG-GYMNQCAIGFSG 96
>gi|302843800|ref|XP_002953441.1| hypothetical protein VOLCADRAFT_94253 [Volvox carteri f.
nagariensis]
gi|300261200|gb|EFJ45414.1| hypothetical protein VOLCADRAFT_94253 [Volvox carteri f.
nagariensis]
Length = 412
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 7/185 (3%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLY 86
+PP TL L+ Y+ VL + +C+S + ++++ + RL ++L H D HL
Sbjct: 117 LPPVTLALVAASVWRYLNPVLLR-----EVCLSPYCVIDRNEVGRLWTASLTHLDLPHLM 171
Query: 87 YNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-AI 145
N+ SL+ LER GS F+ V+ L +S +V + + + Y A+
Sbjct: 172 SNLASLLPDAAVLERQEGSALFIADVALLSTLSSGLFVGWAVLEKQVLQRTGTYYAVGAV 231
Query: 146 GFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLM-VPNASFKGHLSGIL 204
G S++ F+++ + + L +P ++ + L HL+ P+ SF GH+ G+L
Sbjct: 232 GLSSLAFALQVVADETRAGGERRCLGLPLPGRFSWVLSLGFTHLVSAPDTSFAGHMCGVL 291
Query: 205 VGLCY 209
G+ +
Sbjct: 292 AGIAH 296
>gi|225433926|ref|XP_002268743.1| PREDICTED: uncharacterized protein LOC100252469 [Vitis vinifera]
gi|147779771|emb|CAN67998.1| hypothetical protein VITISV_001298 [Vitis vinifera]
gi|297743810|emb|CBI36693.3| unnamed protein product [Vitis vinifera]
Length = 271
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 79/145 (54%), Gaps = 4/145 (2%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKG--RELERMFGSVQFVVLVSFLIISTSVCY 123
+ + R++ SAL H +HL +NM +L G +L M V+F + + +++ S
Sbjct: 48 EGHHWRIITSALSHISVIHLVFNMSALWSLGVVEQLGHMGMGVEFYLQYTLVLVVLSGGL 107
Query: 124 VMLSYVIYLMNHDVTELYQC-AIGFSAVLFSMKTIRTRQSPDVTHQLLNF-SVPAVYAPW 181
V+ SY + + + + A+G+S V+F TI + + P +L F S+P +AP+
Sbjct: 108 VLGSYHVLIQRFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLELFGFLSLPISFAPF 167
Query: 182 IELVIIHLMVPNASFKGHLSGILVG 206
L+ ++VP ASF GHLSGI+VG
Sbjct: 168 ESLIFTSIIVPQASFLGHLSGIIVG 192
>gi|307107576|gb|EFN55818.1| hypothetical protein CHLNCDRAFT_145331 [Chlorella variabilis]
Length = 361
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 86/166 (51%), Gaps = 10/166 (6%)
Query: 54 LGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVS 113
L + ++ H +L+ +Y+RL+ + H D HL N S++++G LER GS F+ LV+
Sbjct: 117 LQVGLNTHRVLHHGEYRRLLTGVMLHADMTHLVSNCTSVVLEGLPLERRLGSPAFLALVA 176
Query: 114 FLIISTSVCYVMLS--YVIYLMNHDVTELYQCA--IGFSAVLFSMKTIRT--RQSPDVTH 167
+++ Y++ + V +L N + Y + +GFS + +++ + R++
Sbjct: 177 STSLTSQGLYLLSTRLAVRFLPNSSLANDYYLSFVVGFSGIALALRVVGGYMREADLAAA 236
Query: 168 QLL---NFSVPAVY-APWIELVIIHLMVPNASFKGHLSGILVGLCY 209
Q+ F + A A W L++ H + PNAS GHL GI G+ +
Sbjct: 237 QVAPSEEFVLTAGRLAAWPSLLMSHALFPNASLTGHLCGIATGVLH 282
>gi|303281010|ref|XP_003059797.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458452|gb|EEH55749.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 153
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 72/132 (54%), Gaps = 2/132 (1%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYY 87
PP TL ++ + + L+ + + + + C++ ++ ++ RLV + L + D+MHL Y
Sbjct: 16 PPVTLGVMALSSALHFGILGDRTFSASDACLNPRAVIELGEWHRLVTAPLFYADEMHLVY 75
Query: 88 NMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY--QCAI 145
N+ S++ KG +LE GS F L+ FL++S + +++V V E Y C
Sbjct: 76 NLSSMLWKGVQLETRMGSEAFAKLLVFLLVSVNAAACAVAWVTRAHFASVEEAYYRSCVT 135
Query: 146 GFSAVLFSMKTI 157
G + VLF++K++
Sbjct: 136 GSAGVLFALKSV 147
>gi|357131644|ref|XP_003567446.1| PREDICTED: uncharacterized protein At3g17611-like [Brachypodium
distachyon]
Length = 326
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFL 115
+ + H I+ D +R + S H + NM SL+ +G LE GS +F +V+ L
Sbjct: 64 VLFNPHLIIEFGDLRRFLFSVFFHTSEPQFVMNMSSLLWRGGRLEEYMGSFEFASMVASL 123
Query: 116 IISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP 175
I S + +L L+ D T YQ + GFS VL M+ + R V L +P
Sbjct: 124 I-GLSQGFTLLLSKGLLLLGDGTAYYQYSSGFSGVLLGMQVLNARAGDIV---LFGVCIP 179
Query: 176 AVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
A YA +L ++ ++ + G+LSGIL GL Y
Sbjct: 180 AKYAELAQLFLMQALIHEVNIVGNLSGILAGLTY 213
>gi|452824142|gb|EME31147.1| rhomboid domain-containing protein 1 [Galdieria sulphuraria]
Length = 337
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 111/242 (45%), Gaps = 13/242 (5%)
Query: 29 PGTL----TLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMH 84
PGT +L + LLY++ + + DS C+S + L ++ L H H
Sbjct: 16 PGTTLVSGSLCSLVILLYLLQTITKT-DSFFYCVSLEQVFFSYRVYLLFIAPLLHSSFWH 74
Query: 85 LYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTEL---Y 141
L +N+++L+ G +E GS + +L L++ + +++ +IYL + +
Sbjct: 75 LLFNVIALLGIGPVVESRKGSTLYGLLCLLLLLVSESLFLIFELLIYLQSRYLFFFPISQ 134
Query: 142 QCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASFKGHL 200
C +GFS +LF++ I Q T QL V + + PWI L++I ++P SF GHL
Sbjct: 135 SCVVGFSGLLFALFVIDCIQVSVRTVQLFGRIPVRSNWIPWIFLLLIQAILPGVSFLGHL 194
Query: 201 SGILVGLCYTETSLGRLV---ERSGRSVSRVVNTLTNVFKLDDD-CNGDDEDSDTSASFL 256
SGI G Y ++ ER + R+ N F L +D C + S ++F
Sbjct: 195 SGIFAGYIYILGGFDWILPSCERLHQCDDRIWFANLNSFVLHNDICCSAAQPSGRVSNFF 254
Query: 257 DF 258
+
Sbjct: 255 SY 256
>gi|395533706|ref|XP_003768895.1| PREDICTED: uncharacterized protein LOC100925524 [Sarcophilus
harrisii]
Length = 305
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 9/138 (6%)
Query: 72 LVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIY 131
L+L+ + H + HL N+V L + GR LE G+ +VL++ + T ++ L+ +
Sbjct: 161 LLLAPVHHENPWHLACNVVGLWLTGRRLELSVGTGLLLVLMTSAALFTGFLHLALNLAME 220
Query: 132 LMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMV 191
+ + + CA+GFS VLF+M+ + + ++ V + LL + E ++
Sbjct: 221 VTLQESSYRADCALGFSGVLFAMQVMSSSENSLVGNLLLCLA---------ESLVASYFA 271
Query: 192 PNASFKGHLSGILVGLCY 209
P SF GHL+G+LVGL Y
Sbjct: 272 PKVSFSGHLTGVLVGLAY 289
>gi|255719446|ref|XP_002556003.1| KLTH0H02816p [Lachancea thermotolerans]
gi|238941969|emb|CAR30141.1| KLTH0H02816p [Lachancea thermotolerans CBS 6340]
Length = 284
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 28 PPGTLT--LILIQTLLYIMNVLAQPWDSLGICISAHTILN-----QRDYKRLVLSALEHG 80
PP LT L++ +L+Y++ SL + I+ H L + D RL L L H
Sbjct: 31 PPAALTTGLVIFMSLIYLL--------SLVVDINGHISLKPNALFKLDLNRLSLYPLGHL 82
Query: 81 DDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTEL 140
HL N +SL ER G+V V+++ L + T++ Y ++ + + +
Sbjct: 83 SLTHLVLNSLSLFGPLTMFERSHGTVHTGVVLNLLAVFTAIVYCLMGSLFFSKTEVLGSS 142
Query: 141 YQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHL 200
C F+ F TIR +Q + H +FS P Y P + LV++ + P +SF GH
Sbjct: 143 GWCFSLFAYFSFKEATIRPQQ--RIFH---SFSAPTKYMPVLILVLVTIFFPGSSFWGHF 197
Query: 201 SGILVG--LCYTETSLGRLVERS 221
G+ +G L + E +G+LV S
Sbjct: 198 IGMGMGYVLAWKENFVGKLVPPS 220
>gi|168005315|ref|XP_001755356.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693484|gb|EDQ79836.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 272
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 10/158 (6%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERM----FGSVQFVVL 111
+ +S ++++Q Y R + SA H +HL +NM +L G +E G+ ++
Sbjct: 39 VGLSYESVISQGQYWRFITSAFSHISFLHLVFNMSALWSLG-VVESFNDYNLGTAYYIQY 97
Query: 112 VSFLIISTSVCYVMLSYVIYLMNHDVTELYQ--CAIGFSAVLFSMKTIRTRQSPDVTHQL 169
+ L++ + + + + +V L+ E Y+ A+G+S V+F TI + P + L
Sbjct: 98 TTILVLLSGLMVLGMYHV--LITRAKLEYYRRVTAVGYSCVVFGWMTILAVRQPSLKLNL 155
Query: 170 LNF-SVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
S+P AP+ L+ ++VP ASF GHL+GILVG
Sbjct: 156 FGLLSLPISLAPFESLIFTSIIVPQASFLGHLAGILVG 193
>gi|367004200|ref|XP_003686833.1| hypothetical protein TPHA_0H01940 [Tetrapisispora phaffii CBS 4417]
gi|357525135|emb|CCE64399.1| hypothetical protein TPHA_0H01940 [Tetrapisispora phaffii CBS 4417]
Length = 269
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 57 CISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLI 116
C + + L D RL+L L H HL +N +L E G+V ++++ L
Sbjct: 41 CTLSPSSLWDLDLTRLLLYPLAHLSIPHLLFNCFALFTPLNAFEATHGTVYTFIMLNILS 100
Query: 117 ISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIR-TRQSPDVTHQLLNFSVP 175
+ T V Y ++ + +Y T A G+ LF+ ++R + P T N ++P
Sbjct: 101 VVTGVIYCVVGHWLY-----PTVAIAGASGWCFTLFAYFSVRESTVKPTTTLFFANITIP 155
Query: 176 AVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
+ P + LV+I L++P +SF GHL G+LVG
Sbjct: 156 TILDPVVTLVVIALLIPGSSFWGHLFGLLVG 186
>gi|302853316|ref|XP_002958174.1| hypothetical protein VOLCADRAFT_99376 [Volvox carteri f.
nagariensis]
gi|300256535|gb|EFJ40799.1| hypothetical protein VOLCADRAFT_99376 [Volvox carteri f.
nagariensis]
Length = 373
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 11/163 (6%)
Query: 52 DSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL 111
S + + H +L R + L HG +H+ +NM++ + G LER G+ Q L
Sbjct: 69 QSTAVSLVPHAVLYDYQVYRFFTAVLVHGGLLHVTFNMLAFVPIGASLERAAGTWQ---L 125
Query: 112 VSFLIIST---SVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTR---QSPDV 165
+ F+++S V Y ++S ++ L+ A+GFS V+F + + S
Sbjct: 126 LHFMLLSCFLEGVIYAVVSGLLAASGLVHGALFHGAVGFSGVIFGLLVWDSALLSSSSSS 185
Query: 166 THQLLN--FSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
+H+ + F VPA + PW+ L++ LM+P AS GHL+G+LVG
Sbjct: 186 SHRSIFGLFHVPAPWYPWVLLLLCQLMLPEASLLGHLAGLLVG 228
>gi|449015371|dbj|BAM78773.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 425
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 27 IPPGTLTLILIQTLLYI-MNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHL 85
+P G L L+ TLL++ L P + +CI ++ Y RL + H + +H+
Sbjct: 28 MPFGNLLLVGSCTLLFLCQQALQIPLSA--VCIDPELQISSNTY-RLFTAPFFHVNLVHI 84
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY----------------V 129
+ NM+ L+ G LER GS F+ +V +I + V +L+ +
Sbjct: 85 FANMIVLLDIGPPLERRLGSFLFLFIVFLMICVSGVFRAILAMSVRVALTPFEMSTRAPL 144
Query: 130 IYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQ--SPDVTHQLLNFSVPAVYAPWIELVII 187
+ L+++ + + CA+GFS VLF+ I Q + D+ L P+ + P LV++
Sbjct: 145 LPLLSYIRRQTHACAVGFSGVLFAFLVIHVHQFVATDILWILGVVPCPSRFYPLALLVLL 204
Query: 188 HLMVPNASFKGHLSGILVGLCYTETSLGRLV 218
LMVP GHL+G+LVG Y L L+
Sbjct: 205 QLMVPAVDLCGHLAGMLVGYTYVRGWLWPLL 235
>gi|147773437|emb|CAN73436.1| hypothetical protein VITISV_006399 [Vitis vinifera]
Length = 353
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 76/163 (46%), Gaps = 50/163 (30%)
Query: 90 VSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI---------YLMNHDVTEL 140
++L+ G ELER+ GSV+ ++ L S ++ +V+++ ++ YLMN
Sbjct: 1 MALVPLGSELERIMGSVRLFYMIVLLATSNAIFHVLIASLVAYNPFYSYHYLMN------ 54
Query: 141 YQCAIGFSAVLFSMKTIRTRQSPDVTHQLL------------------------NFSV-- 174
+CAIGFS +LFSM I T S T ++ N SV
Sbjct: 55 -ECAIGFSGILFSMIVIETSLSGAQTRRIFAETVISANVVNSLVSADAWELRICNLSVES 113
Query: 175 --PA-----VYAPWIELVIIHLMVPNASFKGHLSGILVGLCYT 210
PA +YA WI LV+ L++ N S GHL GIL G YT
Sbjct: 114 CAPARLDVHMYA-WILLVVFQLLMTNVSLLGHLCGILSGFAYT 155
>gi|358342534|dbj|GAA49978.1| rhomboid domain-containing protein 1 [Clonorchis sinensis]
Length = 161
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 74 LSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLM 133
+S H ++ H+Y+N+ I +E + G +V+ L++ + + ++ +++++Y++
Sbjct: 1 MSHFCHLNEWHIYHNLTGFIRHAVWVEVLVGWRSALVVFLHLMVRSQILHLFINHLLYIL 60
Query: 134 NHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTH-QLLN---FSVPAVYAPWIELVIIHL 189
D C IG S ++F++ + QL N F +P W +L +I
Sbjct: 61 TEDEAYSKDCFIGISGLVFAINVLSNLSMKGTWEFQLTNGRIFRIPKAAIAWGDLFLIQF 120
Query: 190 MVPNASFKGHLSGILVGLCYTETSLGR 216
VP +S GHL+G+ GL Y T R
Sbjct: 121 PVPTSSLVGHLAGVFAGLSYQSTFFKR 147
>gi|388521227|gb|AFK48675.1| unknown [Lotus japonicus]
Length = 271
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 4/145 (2%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKG--RELERMFGSVQFVVLVSFLIISTSVCY 123
+ + R++ SA H +HL +NM +L G +L+ + V++ + + +++ S
Sbjct: 48 EGQHWRIITSAFSHISVIHLVFNMSALWSLGVVEQLDHLGLGVEYYLQYTLVLVILSGVL 107
Query: 124 VMLSYVIYLMNHDVTELYQC-AIGFSAVLFSMKTIRTRQSPDVTHQLLNF-SVPAVYAPW 181
V+ Y + + + + A+G+S V+F TI + + P L F S+P +AP+
Sbjct: 108 VLAMYHLLIQRFKIEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPF 167
Query: 182 IELVIIHLMVPNASFKGHLSGILVG 206
L+ ++VP ASF GHLSGI+VG
Sbjct: 168 ESLIFTSIIVPQASFLGHLSGIVVG 192
>gi|50547373|ref|XP_501156.1| YALI0B20878p [Yarrowia lipolytica]
gi|74635233|sp|Q6CDV6.1|RBD2_YARLI RecName: Full=Rhomboid protein 2
gi|49647022|emb|CAG83409.1| YALI0B20878p [Yarrowia lipolytica CLIB122]
Length = 297
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 11/180 (6%)
Query: 62 TILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSV 121
T L + R+ L H HL N+V+L + ER+ G+V+ ++++ L + T++
Sbjct: 50 TALTNFELNRISFYPLVHATWFHLLLNLVALQPIVSQFERVNGTVRTGIVLNILAVVTAI 109
Query: 122 CYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMK---TIRTRQSPDVTHQLLNFSVPAVY 178
+ +LS + D + +G SA +FS IR T N VP
Sbjct: 110 PWCLLSIGFF---PD-----EAVLGSSAWIFSFMGYWAIRESSKQPTTQLAPNLVVPTWL 161
Query: 179 APWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRVVNTLTNVFKL 238
P I LV+I +++P++SF GHL G++ G L L+E S + V + N ++ V L
Sbjct: 162 LPIIYLVVIAIVIPSSSFIGHLLGLIAGWMMALGYLDVLIEPSSKVVLWIENKISRVIDL 221
>gi|290978551|ref|XP_002671999.1| predicted protein [Naegleria gruberi]
gi|284085572|gb|EFC39255.1| predicted protein [Naegleria gruberi]
Length = 230
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 140 LYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNF-SVPAVYAPWIELVIIHLMVPNASFKG 198
L++C+IGFS V+FS TI + + T+ L SVP+ Y PWI L++ + P++SF G
Sbjct: 83 LHECSIGFSGVIFSYLTIASTDTSQTTNSLFGMISVPSKYYPWILLLVTSFLFPSSSFVG 142
Query: 199 HLSGILVGLCYTETSLGRLVERS-------GRSVSRVVNTL-TNVFKLDDDCNGDDE 247
HL GI+ G + L ER+ +S++ N + +++ KLD +G+ +
Sbjct: 143 HLFGIISGYIFV-----LLFERTLFISHYFNAIISKIENLVPSSIKKLDSFYHGETQ 194
>gi|290999042|ref|XP_002682089.1| rhomboid domain-containing protein [Naegleria gruberi]
gi|284095715|gb|EFC49345.1| rhomboid domain-containing protein [Naegleria gruberi]
Length = 368
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 11/176 (6%)
Query: 40 LLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGREL 99
+LYI+ + S IC T + +L HG H+ +NM++L G +
Sbjct: 95 ILYIVQGVFNEPKSSDICYRYSTTILTTKVWQLFTFPFFHGSITHILFNMLALYQFGNRI 154
Query: 100 ERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTE-----LYQCAIGFSAVLFSM 154
E G++ F + F+II S +V + +++ + L +C +G+S VLF
Sbjct: 155 ESTLGTIYFFFISLFMIIFGSAVWVAID-ALFIQGFGAGQTLSFLLDRCTVGYSGVLFGY 213
Query: 155 KTIRTRQSPDVTHQLLNFSVPAVYA----PWIELVIIHLMVPNASFKGHLSGILVG 206
+ P + QL + +A PW+ L++ L++PN S GHL+G++ G
Sbjct: 214 LVFTVQYRP-LFEQLYPGANADDFAPKLIPWLMLIVTSLLMPNVSLMGHLTGMISG 268
>gi|298713340|emb|CBJ33566.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 677
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 15/202 (7%)
Query: 29 PGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYN 88
PGT+ L++I L + ++ A + IS +R+Y RL ++ H + +HL +N
Sbjct: 197 PGTVLLLVIN-LAFAYHLWANRVSPDAVAISYARFWEEREYWRLFTASFSHFEPLHLVFN 255
Query: 89 MVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFS 148
+ RELER+ G+ +++ L L+++T + +++ + + ++ A+GFS
Sbjct: 256 AMG-TWNTRELERLLGTFRYLYLSLDLVVTTIMVVMVIKHALVKWRGVESQREGKAVGFS 314
Query: 149 AVLFSMKT---IRTRQ-SPDVTHQLLNFSVPAVYA---------PWIELVIIHLMVPNAS 195
VLF+ T + R+ P T +S+P + P+ I +++P A+
Sbjct: 315 CVLFAYMTYLAVAMREFCPIGTLCFSTYSIPMFWGMPSLPVNLGPFASQAIAQVVMPRAA 374
Query: 196 FKGHLSGILVGLCYTETSLGRL 217
F GHLSGI +G LG L
Sbjct: 375 FLGHLSGIFMGYLMAWGFLGGL 396
>gi|302785620|ref|XP_002974581.1| hypothetical protein SELMODRAFT_101862 [Selaginella moellendorffii]
gi|300157476|gb|EFJ24101.1| hypothetical protein SELMODRAFT_101862 [Selaginella moellendorffii]
Length = 272
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 83/156 (53%), Gaps = 6/156 (3%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFG-SVQFVVLVSF 114
+ +S T++ Q Y R++ S+ H +HL +NM +L G +E + G + V +
Sbjct: 39 VGMSYETVVLQGQYWRILTSSFSHISFLHLVFNMSALWSLGM-VEGLKGIGLGVTFYVHY 97
Query: 115 LIISTSVCYVMLSYVIYLMNHDVT-ELYQ--CAIGFSAVLFSMKTIRTRQSPDVTHQLLN 171
++ + ++ + +L+ H ELY+ A+G+S V+F TI + P +L
Sbjct: 98 TLLLVLLSAALVLGIYHLLIHRFNLELYKRVSAVGYSCVVFGWMTILASKQPSSKLELFG 157
Query: 172 F-SVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
S+P +AP+ LV ++VP ASF GHL+GI+VG
Sbjct: 158 LLSLPINFAPFESLVFTSIIVPKASFLGHLAGIIVG 193
>gi|224010728|ref|XP_002294321.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969816|gb|EED88155.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 827
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 34/186 (18%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELER--MFGSVQFVVL-V 112
+C + + + ++ R A H + +H+ +NM+SL GRELE +FGSV F+V V
Sbjct: 263 VCKNYNKMCIHHEWWRGFTGATAHFEPLHIGFNMMSLNTLGRELEGGGIFGSVVFLVYNV 322
Query: 113 SFLIISTSVCYVM----LSYVIYL------------MNHDVTELYQCA-IGFSAVLFSMK 155
+F+++++ V M L ++ Y + T L + + +G+SAVLF+
Sbjct: 323 AFVVMTSLVMMGMVFGRLQWIEYQILRTRDEVLRQQLEERQTRLRETSTVGYSAVLFAWM 382
Query: 156 TIRT--RQSPDVTHQLLN------FSVPAV------YAPWIELVIIHLMVPNASFKGHLS 201
I T R P + +SVP + AP I L I ++P SF GHL+
Sbjct: 383 VISTLERNQPTCPIPFFSDVCFSTYSVPGLPFLKFNIAPVISLFIAQFIMPRVSFMGHLA 442
Query: 202 GILVGL 207
GI+ G
Sbjct: 443 GIICGF 448
>gi|312086618|ref|XP_003145148.1| hypothetical protein LOAG_09573 [Loa loa]
Length = 146
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 17/137 (12%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFL 115
+C+ IL + ++ R++ S + H DDMHLY+NM+SL+ KGR LE GS +F++L++
Sbjct: 1 MCLLPSRILYRSEWLRMLASTVMHVDDMHLYFNMISLLWKGRRLEPWLGSRRFLLLLATF 60
Query: 116 IISTSVCYVMLSYV---IYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNF 172
++TS V LSY+ ++ N + QCA+GFS P V H+ F
Sbjct: 61 ALATSSTMVGLSYLADEVFTFNGG-GYMNQCAVGFS-------------DPFVWHKRCFF 106
Query: 173 SVPAVYAPWIELVIIHL 189
P P++ I +
Sbjct: 107 LTPRFTNPYVHFCIARI 123
>gi|303289455|ref|XP_003064015.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454331|gb|EEH51637.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 319
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 96/198 (48%), Gaps = 23/198 (11%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYY 87
P +L + + + ++ +D +G+ +A ++ ++ Y R V ++L H +HL +
Sbjct: 13 PVTSLVVATCAAITWYLHARGLGYDDVGMSYAA--VVREKKYHRCVTASLSHVSVLHLLF 70
Query: 88 NMVSL-------IVKGRELER--------MFGSVQFVVLVSFLIISTSVCYVMLSYVIYL 132
NM +L GR + +GS + L +++ T C ++L+ L
Sbjct: 71 NMSTLWSCGVVEAAGGRGVMSDAESAAGYPWGSAWYARLSLLMLLGT--CGIVLATYHVL 128
Query: 133 MNHDVTELYQ--CAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSV--PAVYAPWIELVIIH 188
+ E Y+ A+G+SAV+F TI + + P + L+ +V P AP+ L
Sbjct: 129 LTRFRREEYERVTAVGYSAVVFGWMTILSVKRPTSSLVLIGGAVNLPVNLAPFASLAFTS 188
Query: 189 LMVPNASFKGHLSGILVG 206
++VP ASF GHL+GI++G
Sbjct: 189 IVVPRASFVGHLAGIVMG 206
>gi|357126318|ref|XP_003564835.1| PREDICTED: rhomboid protein 2-like [Brachypodium distachyon]
Length = 273
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKG--RELERMFGSVQFVVLVS 113
+ +S L Y R++ SA H +HL +NM +L G +L ++ V++ + +
Sbjct: 39 VGLSYEAALEGGQYWRIITSAFSHISVVHLVFNMSALWSLGAVEQLGQLGLGVEYYLHYT 98
Query: 114 FLIISTSVCYVMLSYVIYLMNHDVTELYQC-AIGFSAVLFSMKTIRTRQSPDVTHQLLN- 171
+++ S V+ Y + + V + A+G+S V+F TI + P L
Sbjct: 99 LVLVVLSGLLVLGIYHVMIQKFKVEYFRRVTAVGYSCVVFGWMTILAAKQPSSKLNLFGV 158
Query: 172 FSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
S+P +AP+ L+ +MVP ASF GHLSGI+VG
Sbjct: 159 LSLPISFAPFESLIFTSIMVPQASFIGHLSGIIVG 193
>gi|302759717|ref|XP_002963281.1| hypothetical protein SELMODRAFT_79372 [Selaginella moellendorffii]
gi|300168549|gb|EFJ35152.1| hypothetical protein SELMODRAFT_79372 [Selaginella moellendorffii]
Length = 272
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 6/156 (3%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFG-SVQFVVLVSF 114
+ +S T++ Q Y R++ S+ H +HL +NM +L G +E + G + V +
Sbjct: 39 VGMSYETVVLQGQYWRILTSSFSHISFLHLVFNMSALWSLGM-VEGLKGIGLGITFYVHY 97
Query: 115 LIISTSVCYVMLSYVIYLMNHDVT-ELYQ--CAIGFSAVLFSMKTIRTRQSPDVTHQLLN 171
++ + ++ + + + H ELY+ A+G+S V+F TI + P +L
Sbjct: 98 TLLLVLLSAALVLGIYHFLVHRFNLELYKRVSAVGYSCVVFGWMTILASKQPSSKLELFG 157
Query: 172 F-SVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
S+P +AP+ LV ++VP ASF GHL+GI+VG
Sbjct: 158 LLSLPINFAPFESLVFTSIIVPKASFLGHLAGIIVG 193
>gi|297817250|ref|XP_002876508.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297322346|gb|EFH52767.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 269
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 9/218 (4%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKG--RELERMFGSVQFVVLVSFLIISTSVCY 123
+ Y R++ SAL H +HL +NM +L G +L + + + + +++ S
Sbjct: 48 EGHYWRMITSALSHISVLHLVFNMSALWSLGVVEQLGHVGLGTAYYLHYTLVLVVFSGVL 107
Query: 124 VMLSYVIYLMNHDVTELYQC-AIGFSAVLFSMKTIRTRQSPDVTHQLLNF-SVPAVYAPW 181
V+ Y + + + + A+G+S V+F TI + + P L S+P +AP+
Sbjct: 108 VIGIYHLLIARFKIDYFRRVTAVGYSCVVFGWMTILSMKQPSSKLDLFGLLSLPISFAPF 167
Query: 182 IELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRL-----VERSGRSVSRVVNTLTNVF 236
L+ ++VP ASF GHLSGILVG + +G + + G V V +L
Sbjct: 168 ESLIFTSIIVPQASFLGHLSGILVGYAISWGLIGGMNNYWALTMLGWIVVVFVFSLKKSG 227
Query: 237 KLDDDCNGDDEDSDTSASFLDFTDNTKNDAATIVSASS 274
D + +D S + F N + A+ V S
Sbjct: 228 AYDFSFLEIESLTDASLPSVRFIGNGRTLQASAVPLSG 265
>gi|21952847|dbj|BAC06262.1| P0696G06.19 [Oryza sativa Japonica Group]
Length = 685
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKG--RELERMFGSVQFVVLVS 113
+ +S + Y R++ SA H +HL +NM +L G +L ++ V++ + +
Sbjct: 451 VGLSYEAAMEGGQYWRIITSAFSHISVVHLVFNMSALWSLGVVEQLGQIGLGVEYYLHYT 510
Query: 114 FLIISTSVCYVMLSYVIYLMNHDVTELYQ-CAIGFSAVLFSMKTIRTRQSPDVTHQLLN- 171
+++ S V+ Y + + V + A+G+S V+F TI + P +
Sbjct: 511 LVLVVLSGLLVLGFYHVMIQKFKVEYFRRVTAVGYSCVVFGWMTILATKQPSSKLNIFGV 570
Query: 172 FSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
S+P +AP+ L+ +MVP ASF GHLSGI+VG
Sbjct: 571 LSLPISFAPFESLIFTSIMVPQASFIGHLSGIIVG 605
>gi|15231701|ref|NP_191511.1| RHOMBOID-like protein 13 [Arabidopsis thaliana]
gi|6996288|emb|CAB75449.1| putative protein [Arabidopsis thaliana]
gi|332646414|gb|AEE79935.1| RHOMBOID-like protein 13 [Arabidopsis thaliana]
Length = 269
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 9/218 (4%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKG--RELERMFGSVQFVVLVSFLIISTSVCY 123
+ Y R++ SAL H +HL +NM +L G +L + + + + +++ S
Sbjct: 48 EGHYWRMITSALSHISVLHLVFNMSALWSLGVVEQLGHVGLGTAYYLHYTLVLVVFSGVL 107
Query: 124 VMLSYVIYLMNHDVTELYQC-AIGFSAVLFSMKTIRTRQSPDVTHQLLNF-SVPAVYAPW 181
V+ Y + + + + A+G+S V+F TI + + P L S+P +AP+
Sbjct: 108 VIGIYHLLIARFKIDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGLLSLPISFAPF 167
Query: 182 IELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRL-----VERSGRSVSRVVNTLTNVF 236
L+ ++VP ASF GHLSGILVG + +G + + G V V +L
Sbjct: 168 ESLIFTSIIVPQASFLGHLSGILVGYAISWGLIGGMNNYWALTMLGWIVVVFVFSLKKSG 227
Query: 237 KLDDDCNGDDEDSDTSASFLDFTDNTKNDAATIVSASS 274
D + +D S + F N + A+ V S
Sbjct: 228 AYDFSFLEIESLTDASLPSVRFIGNGRTLQASAVPLSG 265
>gi|219363065|ref|NP_001136563.1| putative Rhomboid family protein [Zea mays]
gi|194696188|gb|ACF82178.1| unknown [Zea mays]
gi|195635987|gb|ACG37462.1| rhomboid family protein [Zea mays]
gi|413951669|gb|AFW84318.1| putative Rhomboid family protein [Zea mays]
Length = 275
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 4/155 (2%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKG--RELERMFGSVQFVVLVS 113
+ +S ++ Y R++ SA H +HL +NM +L G +L ++ V++ + +
Sbjct: 39 VGLSYEAAVDSGQYWRVITSAFSHVSVVHLVFNMSALWSLGAVEQLGQIGLGVEYYLHYT 98
Query: 114 FLIISTSVCYVMLSYVIYLMNHDVTELYQC-AIGFSAVLFSMKTIRTRQSPDVTHQLLN- 171
+++ S V+ Y + + V + A+G+S V+F TI + P +
Sbjct: 99 LVLVVLSGLLVLGFYHVMIQRFKVEYFRRVTAVGYSCVVFGWMTILAAKQPSSKLNIFGV 158
Query: 172 FSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
S+P +AP+ L+ +MVP ASF GHLSGI+VG
Sbjct: 159 LSLPISFAPFESLIFTSIMVPQASFIGHLSGIIVG 193
>gi|254566099|ref|XP_002490160.1| Possible rhomboid protease, has similarity to eukaryotic rhomboid
proteases including Pcp1p [Komagataella pastoris GS115]
gi|238029956|emb|CAY67879.1| Possible rhomboid protease, has similarity to eukaryotic rhomboid
proteases including Pcp1p [Komagataella pastoris GS115]
gi|328350561|emb|CCA36961.1| rhomboid family protein [Komagataella pastoris CBS 7435]
Length = 258
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 24 FHL---IPPGTLT-LILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEH 79
FHL PP ++ L++ YI+ V SL + A L + ++ L L H
Sbjct: 16 FHLGGKYPPALVSGLVIFLISFYIVGVFTSLRSSLALDPWA---LYHLNLNKISLYPLVH 72
Query: 80 GDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTE 139
+HL++N+ +LI ER G+V V+++ L + T++ Y +L V +
Sbjct: 73 SSFLHLFFNIFALISPLSLYERSNGTVHTGVVLNVLAVVTALPYCVLGMVFFPK------ 126
Query: 140 LYQCAIGFSAVLFSM----KTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNAS 195
+G SA FS +++ P T ++ ++ +P + P+I LV L+ P +S
Sbjct: 127 --VSVVGASAWCFSFFGYYSYLQSLSYP--TFKVQDYEIPTIATPFILLVASALIFPGSS 182
Query: 196 FKGHLSGILVGLCYTETSLGRLVERSGRSVS 226
F GHL G+L G + L L+E S + +S
Sbjct: 183 FIGHLLGLLSGFALAKGYLKPLIEPSSKVIS 213
>gi|115441593|ref|NP_001045076.1| Os01g0895500 [Oryza sativa Japonica Group]
gi|57899816|dbj|BAD87561.1| unknown protein [Oryza sativa Japonica Group]
gi|113534607|dbj|BAF06990.1| Os01g0895500 [Oryza sativa Japonica Group]
gi|215686553|dbj|BAG88806.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 273
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKG--RELERMFGSVQFVVLVS 113
+ +S + Y R++ SA H +HL +NM +L G +L ++ V++ + +
Sbjct: 39 VGLSYEAAMEGGQYWRIITSAFSHISVVHLVFNMSALWSLGVVEQLGQIGLGVEYYLHYT 98
Query: 114 FLIISTSVCYVMLSYVIYLMNHDVTELYQC-AIGFSAVLFSMKTIRTRQSPDVTHQLLN- 171
+++ S V+ Y + + V + A+G+S V+F TI + P +
Sbjct: 99 LVLVVLSGLLVLGFYHVMIQKFKVEYFRRVTAVGYSCVVFGWMTILATKQPSSKLNIFGV 158
Query: 172 FSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
S+P +AP+ L+ +MVP ASF GHLSGI+VG
Sbjct: 159 LSLPISFAPFESLIFTSIMVPQASFIGHLSGIIVG 193
>gi|125528698|gb|EAY76812.1| hypothetical protein OsI_04771 [Oryza sativa Indica Group]
Length = 273
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKG--RELERMFGSVQFVVLVS 113
+ +S + Y R++ SA H +HL +NM +L G +L ++ V++ + +
Sbjct: 39 VGLSYEAAMEGGQYWRIITSAFSHISVVHLVFNMSALWSLGVVEQLGQIGLGVEYYLHYT 98
Query: 114 FLIISTSVCYVMLSYVIYLMNHDVTELYQC-AIGFSAVLFSMKTIRTRQSPDVTHQLLN- 171
+++ S V+ Y + + V + A+G+S V+F TI + P +
Sbjct: 99 LVLVVLSGLLVLGFYHVMIQKFKVEYFRRVTAVGYSCVVFGWMTILATKQPSSKLNIFGV 158
Query: 172 FSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
S+P +AP+ L+ +MVP ASF GHLSGI+VG
Sbjct: 159 LSLPISFAPFESLIFTSIMVPQASFIGHLSGIIVG 193
>gi|397573927|gb|EJK48937.1| hypothetical protein THAOC_32226 [Thalassiosira oceanica]
Length = 713
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 89/180 (49%), Gaps = 37/180 (20%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELE-RMFGSVQFVVLVSFLIISTSV 121
I+++ ++ R + A H D +H+ +NMVS+ GRE+E + S++F++ L++ T++
Sbjct: 281 IVHEHEWWRGITGATAHFDLLHVGFNMVSMDNLGREIEGTLLNSIEFLMWNFALVVYTTI 340
Query: 122 CYVMLSY--VIYLM-------NHDVTELYQ---------CAIGFSAVLFSMKTIRT--RQ 161
+ + Y + YL N ++ Y+ ++G+SAVLF+ + T R+
Sbjct: 341 IMIAMVYARIRYLQRKIDACGNAEIRATYEMKQDKLRSTSSVGYSAVLFAWMVVSTMERK 400
Query: 162 SP--------DVTHQLLNFSVPAV------YAPWIELVIIHLMVPNASFKGHLSGILVGL 207
P DV + VP + ++P + L+ ++ P SF GHL+GI+ G
Sbjct: 401 MPTCPIPFAKDVC--FATYEVPGLSWLRFNWSPIVSLIFCQIIFPRVSFIGHLAGIICGF 458
>gi|222619672|gb|EEE55804.1| hypothetical protein OsJ_04394 [Oryza sativa Japonica Group]
Length = 362
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKG--RELERMFGSVQFVVLVS 113
+ +S + Y R++ SA H +HL +NM +L G +L ++ V++ + +
Sbjct: 39 VGLSYEAAMEGGQYWRIITSAFSHISVVHLVFNMSALWSLGVVEQLGQIGLGVEYYLHYT 98
Query: 114 FLIISTSVCYVMLSYVIYLMNHDVTELYQ-CAIGFSAVLFSMKTIRTRQSPDVTHQLLN- 171
+++ S V+ Y + + V + A+G+S V+F TI + P +
Sbjct: 99 LVLVVLSGLLVLGFYHVMIQKFKVEYFRRVTAVGYSCVVFGWMTILATKQPSSKLNIFGV 158
Query: 172 FSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
S+P +AP+ L+ +MVP ASF GHLSGI+VG
Sbjct: 159 LSLPISFAPFESLIFTSIMVPQASFIGHLSGIIVG 193
>gi|449454580|ref|XP_004145032.1| PREDICTED: rhomboid protein 2-like [Cucumis sativus]
gi|449471895|ref|XP_004153438.1| PREDICTED: rhomboid protein 2-like [Cucumis sativus]
gi|449520980|ref|XP_004167510.1| PREDICTED: LOW QUALITY PROTEIN: rhomboid protein 2-like [Cucumis
sativus]
Length = 271
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKG--RELERMFGSVQFVVLVSFLIISTSVCY 123
+ + R++ SA H +HL +NM +L G +L + V + + + +++ S
Sbjct: 48 EGHHWRIITSAFSHISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVL 107
Query: 124 VMLSYVIYLMNHDVTELYQC-AIGFSAVLFSMKTIRTRQSPDVTHQLLNF-SVPAVYAPW 181
V+ Y + + + + A+G+S V+F TI + + P L F S+P +AP+
Sbjct: 108 VLGMYHLLIQKFKLEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPF 167
Query: 182 IELVIIHLMVPNASFKGHLSGILVG 206
L+ ++VP ASF GHLSGI+VG
Sbjct: 168 ESLIFTSIIVPQASFLGHLSGIIVG 192
>gi|307136259|gb|ADN34087.1| rhomboid protein [Cucumis melo subsp. melo]
Length = 271
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKG--RELERMFGSVQFVVLVSFLIISTSVCY 123
+ + R++ SA H +HL +NM +L G +L + V + + + +++ S
Sbjct: 48 EGHHWRIITSAFSHISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVL 107
Query: 124 VMLSYVIYLMNHDVTELYQC-AIGFSAVLFSMKTIRTRQSPDVTHQLLNF-SVPAVYAPW 181
V+ Y + + + + A+G+S V+F TI + + P L F S+P +AP+
Sbjct: 108 VLGMYHLLIQKFKLEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPF 167
Query: 182 IELVIIHLMVPNASFKGHLSGILVG 206
L+ ++VP ASF GHLSGI+VG
Sbjct: 168 ESLIFTSIIVPQASFLGHLSGIIVG 192
>gi|219126331|ref|XP_002183413.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405169|gb|EEC45113.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 687
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 28/169 (16%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
+++ + R + A H + HL++NM +L G ELE GS ++ V+F + + S+
Sbjct: 268 MMHDGEIWRGLSGATAHFETWHLFFNMQALYSLGSELESNDGSTKYSS-VTFFMYTASL- 325
Query: 123 YVMLSYVIYLMNHDVTELYQCA-----------IGFSAVLFSMKTIRTRQSPD------- 164
V+ + + +L+ + ++ A +GFS VLF+ + + +
Sbjct: 326 -VLWTTIFWLLLETLKRRFESAMSPVASGDSPTVGFSGVLFAWMVVASLEQSQTCPVHFL 384
Query: 165 -----VTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLC 208
VTH+ + F +AP ++L I +++P S GHL+GIL GL
Sbjct: 385 PSLCFVTHEFVGFRFN--FAPLVQLGIAQVLLPRVSLTGHLAGILSGLA 431
>gi|224095662|ref|XP_002310428.1| predicted protein [Populus trichocarpa]
gi|222853331|gb|EEE90878.1| predicted protein [Populus trichocarpa]
Length = 269
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 77/149 (51%), Gaps = 12/149 (8%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
+ + R++ SA H +HL +NM +L G + G + + V++ + T V V+
Sbjct: 48 EGHHWRIITSAFSHISVIHLVFNMSALWSLG--VVEQLGHIG--LGVAYYLHHTLVLVVL 103
Query: 126 LSYVIYLMNHDVTELYQ-------CAIGFSAVLFSMKTIRTRQSPDVTHQLLNF-SVPAV 177
++ M H + + ++ A+G+S V+F TI + + P L F S+P
Sbjct: 104 SGALVLGMYHLLIQRFKIEYFRSVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPIS 163
Query: 178 YAPWIELVIIHLMVPNASFKGHLSGILVG 206
+AP+ L+ ++VP ASF GHLSGI+VG
Sbjct: 164 FAPFESLIFTSIIVPQASFLGHLSGIVVG 192
>gi|242059531|ref|XP_002458911.1| hypothetical protein SORBIDRAFT_03g042510 [Sorghum bicolor]
gi|241930886|gb|EES04031.1| hypothetical protein SORBIDRAFT_03g042510 [Sorghum bicolor]
Length = 273
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 4/155 (2%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKG--RELERMFGSVQFVVLVS 113
+ +S ++ Y R++ SA H +HL +NM +L G +L ++ V++ + +
Sbjct: 39 VGLSYEAAVDGGQYWRIITSAFSHISVVHLVFNMSALWSLGVVEQLGQIGLGVEYYLHYT 98
Query: 114 FLIISTSVCYVMLSYVIYLMNHDVTELYQC-AIGFSAVLFSMKTIRTRQSPDVTHQLLN- 171
+++ S V+ Y + + V + A+G+S V+F TI + P +
Sbjct: 99 LVLVVLSGLLVLGFYHMMIQRFKVEYFRRVTAVGYSCVVFGWMTILAAKQPSSKLNIFGV 158
Query: 172 FSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
S+P +AP+ L+ +MVP ASF GHLSGI+VG
Sbjct: 159 LSLPISFAPFESLIFTSIMVPQASFIGHLSGIIVG 193
>gi|255577227|ref|XP_002529496.1| Rhomboid protein, putative [Ricinus communis]
gi|223531054|gb|EEF32906.1| Rhomboid protein, putative [Ricinus communis]
Length = 269
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKG--RELERMFGSVQFVVLVSFLIISTSVCY 123
+ + R++ SA H +HL +NM +L G +L M + + + + +++ S
Sbjct: 48 EGHHWRIITSAFSHISVLHLVFNMSALWSLGVVEQLGHMGLGIAYYLHYTLVLVVLSGVL 107
Query: 124 VMLSYVIYLMNHDVTELYQC-AIGFSAVLFSMKTIRTRQSPDVTHQLLNF-SVPAVYAPW 181
V+ Y I + V + A+G+S V+F TI + + P L F S+P +AP+
Sbjct: 108 VLGMYRILIQRFKVDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPF 167
Query: 182 IELVIIHLMVPNASFKGHLSGILVG 206
L+ ++VP ASF GHLSGI+VG
Sbjct: 168 ESLIFTSIIVPQASFLGHLSGIIVG 192
>gi|452820434|gb|EME27476.1| hypothetical protein Gasu_49270 [Galdieria sulphuraria]
Length = 357
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 4/155 (2%)
Query: 56 ICISAHTILNQ-RDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSF 114
IC+S I + + Y+ V H + G LE++ GS++F+ +V +
Sbjct: 72 ICLSFGRIFYKGQAYRVFVAPWFYHSAAEFASSAFAWCFIAG-PLEKLLGSLRFLSIVLW 130
Query: 115 LIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSV 174
+ T + Y+ L + + E C +G S VLF++ + + L + V
Sbjct: 131 FVGLTGLLYITLGLFFSKFHWSLPE--DCVLGISNVLFALLVLAFSRFEFSLATLRDLPV 188
Query: 175 PAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
P+ PW+ L++ M+P++ F GHLSG+L G +
Sbjct: 189 PSWSFPWMILIVCQAMIPSSPFLGHLSGVLAGTLF 223
>gi|159475046|ref|XP_001695634.1| rhomboid-like protease [Chlamydomonas reinhardtii]
gi|158275645|gb|EDP01421.1| rhomboid-like protease [Chlamydomonas reinhardtii]
Length = 429
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 86/213 (40%), Gaps = 35/213 (16%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLY 86
+PP TL L ++ V+ + W C+S + ++ +R+ RL S L H D HL
Sbjct: 125 LPPVTLALTAAAVWRFLNPVMLREW-----CLSPYCVVERREVGRLWRSGLVHLDAPHLL 179
Query: 87 YNMVSLIVKGRELERMFGSVQFVVLVSFLI--------------------------ISTS 120
N+ +LI LER +S+
Sbjct: 180 SNLAALIPDCAALERQHQRQHQQAGARGGGGGGGGGVEGALLPAAAFAADVAVLAGLSSG 239
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKT---IRTR-QSPDVTHQLLNFSVPA 176
+ V L+ T A+G S++ F+++ +R + P LL VPA
Sbjct: 240 LFVVWAVAERQLLRRPGTYYAVGAVGLSSLAFALQVEAVVRGEARGPGARVWLLGLPVPA 299
Query: 177 VYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
+A +L + H+ P+ASF GH++G+L G+ +
Sbjct: 300 AHAWLAQLALTHVTAPDASFAGHVAGVLAGVAH 332
>gi|428173649|gb|EKX42550.1| hypothetical protein GUITHDRAFT_88083, partial [Guillardia theta
CCMP2712]
Length = 241
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
++ + R + ++L H + +HL +NM S + R E++ GS++++ ++ + +
Sbjct: 52 EKQWWRTLSASLSHINLVHLGFNMFS-TWQLRHAEQILGSLEYLRFTLVFLLLSVIFQNA 110
Query: 126 LSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELV 185
+ +V+ L +GFS V+F+ T + + + L F VP +P+ L+
Sbjct: 111 IHHVLLRTPSAEYTLNTVGVGFSCVVFAWMTWMSLLTSGQSLDFLFFRVPYNMSPFASLI 170
Query: 186 IIHLMVPNASFKGHLSGILVG 206
LM+P F GHLSGI+ G
Sbjct: 171 FTQLMIPRVDFIGHLSGIIAG 191
>gi|290980876|ref|XP_002673157.1| rhomboid domain-containing protein [Naegleria gruberi]
gi|284086739|gb|EFC40413.1| rhomboid domain-containing protein [Naegleria gruberi]
Length = 296
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 91/188 (48%), Gaps = 14/188 (7%)
Query: 29 PGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYN 88
P + T++LI T+++ + + S + + I+ ++ R+V S H +H+ +N
Sbjct: 12 PLSFTIVLINTIVFFILSFGRI-PSEFVSYNYDKIIGEKQVWRIVTSTFSHFSIIHILFN 70
Query: 89 MVSLIVKGRELERM---------FGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTE 139
+ SL R++E + F SV ++FL++ S ++ ++Y +
Sbjct: 71 LGSLW-GMRQVELIGQETLGSHSFHSVMEYFKITFLLLVFSTLFITVTYFCLVKFMKWEN 129
Query: 140 LYQCAI-GFSAVLFSMKTIRTRQS--PDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASF 196
Q I G+S VLF M T+ Q+ + ++P + P++ L++ +++P ASF
Sbjct: 130 YRQVNIVGYSGVLFGMMTMSILQNGISSKGSSMFGLNLPNILMPFMSLILTQMLIPQASF 189
Query: 197 KGHLSGIL 204
GHL GI+
Sbjct: 190 VGHLGGIV 197
>gi|326529769|dbj|BAK04831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 274
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKG--RELERMFG-SVQFVVLV 112
+ +S + + RL+ +A H +HL +NM +L G +L G VQ+ +
Sbjct: 39 VGLSYEAAVEGGQHWRLITAAFSHVSVVHLVFNMSALWSLGAVEQLGPQAGLGVQYYLHY 98
Query: 113 SFLIISTSVCYVMLSYVIYLMNHDVTELYQC-AIGFSAVLFSMKTIRTRQSPDVTHQLLN 171
+ +++ S V+ Y + + V + A+G+S V+F TI + P L
Sbjct: 99 TLVLVVLSGLLVLGIYHVMIRRFKVDYFRRVTAVGYSCVVFGWMTILAAKQPSSKLNLFG 158
Query: 172 -FSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
S+P +AP+ L+ +MVP ASF GHLSGI+VG
Sbjct: 159 VLSLPISFAPFESLIFTSIMVPQASFVGHLSGIIVG 194
>gi|145348648|ref|XP_001418758.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578988|gb|ABO97051.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 351
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 73/185 (39%), Gaps = 5/185 (2%)
Query: 29 PGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQ--RDYKRLVLSALEHGDDMHLY 86
P T ++I + LA D +C S Y R+ S HG H
Sbjct: 17 PLATTAVVIAVAISFALALAANGDFARVCASPRLAFEHPLSSYHRVWTSTFSHGSFPHAL 76
Query: 87 YNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIG 146
N ++ + LER G+ F L + + + +++ CAIG
Sbjct: 77 LNCLAFVPMASALERSIGTTHFAWLFATFAHAAYALSASAATALWMALGYRASYESCAIG 136
Query: 147 FSAVLFSMKTIRTRQSPDVTHQLLN--FSVPAVYAPWIELVIIHLMVPNASFKGHLSGIL 204
S V+F++ T + DV + + F+V + Y P L+ I L++P SF GH GI
Sbjct: 137 MSGVVFALIVCETNVN-DVERRSVFGLFTVSSEYYPIALLLFIQLLMPGVSFIGHAGGIA 195
Query: 205 VGLCY 209
G Y
Sbjct: 196 AGWLY 200
>gi|397612198|gb|EJK61641.1| hypothetical protein THAOC_17833 [Thalassiosira oceanica]
Length = 620
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 35/180 (19%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELE-RMFGSVQFVVLVSFLIISTSV 121
I+ + ++ R + A H + +H+ +NM+S+ G E+E + SV+F++ L++ T++
Sbjct: 144 IVGEHEWWRGLTGATAHFEPLHIGFNMMSMNTLGSEIEGSLLNSVEFLMWNGALVVYTTM 203
Query: 122 CYVMLSY--VIYLMN----------------HDVTELYQ--CAIGFSAVLFSMKTIRT-- 159
+ + Y + YL + EL + ++G+SAVLF+ I T
Sbjct: 204 IMMAMVYARIRYLQRKIDACGNAQPQLQATYEEKQELLRDTSSVGYSAVLFAWMVISTME 263
Query: 160 RQSPDVTHQLLN------FSVPAV------YAPWIELVIIHLMVPNASFKGHLSGILVGL 207
R+ P LN + VP + +P + L + ++P SF GHL+GI+ G
Sbjct: 264 RKQPTCPIPFLNDVCFSTYEVPGLPFLRFNLSPIVSLFVCQFIMPRVSFMGHLAGIVAGF 323
>gi|452822090|gb|EME29113.1| hypothetical protein isoform 1 [Galdieria sulphuraria]
Length = 195
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 95/182 (52%), Gaps = 9/182 (4%)
Query: 29 PGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYN 88
P T +I I +++++ + + W + + ++ ++ R + S L H MHL N
Sbjct: 19 PVTCLVIAICIIVWLV-ITYKGWSYYDVGCNYDCVIVDKETWRWISSTLSHISLMHLILN 77
Query: 89 MVSLIVKGRELERMFGSVQFV---VLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAI 145
M SL +E+ GS+ ++ V+++FL ST V + ++Y+ + H + +
Sbjct: 78 MYSLW-NLSWMEQRLGSLVYLTWNVVIAFL--STCVT-LFINYLQLTVFHSEQVRHVYLV 133
Query: 146 GFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASFKGHLSGIL 204
G+SAVLF + I ++ +L+ + ++ P+I L ++ L+VP ASF GH SGIL
Sbjct: 134 GYSAVLFGLFVIASQHIKVARIWILDEVLISPIWIPFISLGVVTLLVPEASFVGHCSGIL 193
Query: 205 VG 206
+G
Sbjct: 194 IG 195
>gi|6325010|ref|NP_015078.1| Rbd2p [Saccharomyces cerevisiae S288c]
gi|74583829|sp|Q12270.1|RBD2_YEAST RecName: Full=Rhomboid protein 2
gi|1061243|emb|CAA91598.1| putative protein [Saccharomyces cerevisiae]
gi|1370507|emb|CAA97967.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285815299|tpg|DAA11191.1| TPA: Rbd2p [Saccharomyces cerevisiae S288c]
gi|392296043|gb|EIW07146.1| Rbd2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 262
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 14/216 (6%)
Query: 28 PPGTLT--LILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHL 85
PP LT L++ T +Y+++ + + L + A L + RL L L H HL
Sbjct: 13 PPAALTTGLVVFLTAIYLLSFIFALREDLSL---APESLFKLQMSRLSLYPLIHLSLPHL 69
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAI 145
+N++++ E G+V V ++ + + Y +L ++Y L A
Sbjct: 70 LFNVLAIWAPLNLFEETHGTVYTGVFLNLSALFAGILYCLLGKLLY-----PEALVAGAS 124
Query: 146 GFSAVLFSMKTIRTRQ-SPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGIL 204
G+ LF+ + + Q P ++S+P +Y P + LV I +++P +SF GH G+
Sbjct: 125 GWCFTLFAYYSFKESQIRPRTRIFRTDYSIPTLYTPLVLLVAIAVVIPGSSFWGHFFGLC 184
Query: 205 VG--LCYTETSLGRLVERSGRSVSRVVNTLTNVFKL 238
VG + Y E+ + + G ++++ +L + +L
Sbjct: 185 VGYAIGYKESWFNK-ITPPGWIITKIEKSLDGLIRL 219
>gi|255634698|gb|ACU17711.1| unknown [Glycine max]
Length = 271
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 17/161 (10%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKG--RELERMFGSVQFVVLVS 113
+ +S T L + R++ SA H +HL +NM +L G +L + V++ +
Sbjct: 39 VGLSYETALEGHHW-RIITSAFSHISVIHLVFNMSALWSLGVVEQLGHLGLGVEYYLQY- 96
Query: 114 FLIISTSVCYVMLSYVIYLMNHDVTELYQ-------CAIGFSAVLFSMKTIRTRQSPDVT 166
T V V+ ++ M H + E ++ A+G+S V+F TI + + P
Sbjct: 97 -----TLVLVVLSGVLVLAMYHLLIERFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSK 151
Query: 167 HQLLNF-SVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
L F S+P +AP+ L+ ++VP ASF GHLSGI+VG
Sbjct: 152 LDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIVVG 192
>gi|356538887|ref|XP_003537932.1| PREDICTED: rhomboid protein 2-like [Glycine max]
Length = 271
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 17/161 (10%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKG--RELERMFGSVQFVVLVS 113
+ +S T L + R++ SA H +HL +NM +L G +L + V++ +
Sbjct: 39 VGLSYETALEGHHW-RIITSAFSHISVIHLVFNMSALWSLGVVEQLGHLGLGVEYYLQY- 96
Query: 114 FLIISTSVCYVMLSYVIYLMNHDVTELYQ-------CAIGFSAVLFSMKTIRTRQSPDVT 166
T V V+ ++ M H + E ++ A+G+S V+F TI + + P
Sbjct: 97 -----TLVLVVLSGVLVLAMYHLLIERFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSK 151
Query: 167 HQLLNF-SVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
L F S+P +AP+ L+ ++VP ASF GHLSGI+VG
Sbjct: 152 LDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIVVG 192
>gi|356545465|ref|XP_003541163.1| PREDICTED: rhomboid protein 2-like [Glycine max]
Length = 271
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 4/145 (2%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKG--RELERMFGSVQFVVLVSFLIISTSVCY 123
+ + R++ SA H +HL +NM +L G +L + V++ + + +++ S
Sbjct: 48 EGHHWRIITSAFSHISVIHLVFNMSALWSLGVVEQLGHLGLGVEYYLQYTLVLVVLSGVL 107
Query: 124 VMLSYVIYLMNHDVTELYQC-AIGFSAVLFSMKTIRTRQSPDVTHQLLNF-SVPAVYAPW 181
V+ Y + + + + A+G+S V+F TI + + P L F S+P +AP+
Sbjct: 108 VLAMYHLLIQRFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPF 167
Query: 182 IELVIIHLMVPNASFKGHLSGILVG 206
L+ ++VP ASF GHLSGI+VG
Sbjct: 168 ESLIFTSIIVPQASFLGHLSGIVVG 192
>gi|156848694|ref|XP_001647228.1| hypothetical protein Kpol_1002p15 [Vanderwaltozyma polyspora DSM
70294]
gi|156117913|gb|EDO19370.1| hypothetical protein Kpol_1002p15 [Vanderwaltozyma polyspora DSM
70294]
Length = 261
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 26/235 (11%)
Query: 28 PPGTLTLILIQTL--LYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHL 85
PP +T+ ++ L LY++N+ D+LG+ S+ L + RL L L H +HL
Sbjct: 14 PPSAVTVCVLALLIVLYVVNLYVNINDNLGLRPSS---LFDFELSRLSLYPLAHLSIIHL 70
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAI 145
+N++SL E G+V V ++ ++ V Y ++ ++Y DV
Sbjct: 71 VFNVISLFPLLNLYESTHGTVMTAVTLNITAVAAGVMYCIVGSLLY---PDVGVAGSSGW 127
Query: 146 GFSAV---LFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSG 202
FS + F ++ R TH +++P +P I +V+I +++P++SF GH G
Sbjct: 128 FFSLLGYYSFKEASVHPRTPIFKTH----YTIPTQLSPLILIVVIFVLIPHSSFWGHFFG 183
Query: 203 ILVG--LCYTETSLGRLVERSGRSVS---------RVVNTLTNVFKLDDDCNGDD 246
+LVG + + E +L+ S V R++ +K D N D
Sbjct: 184 LLVGYFMGWRENWFVKLLPPSWIIVMIETKLDFLIRLIPGFVKYYKQQDVENNDQ 238
>gi|151942556|gb|EDN60902.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190407719|gb|EDV10984.1| rhomboid protease [Saccharomyces cerevisiae RM11-1a]
gi|207340765|gb|EDZ69014.1| YPL246Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270648|gb|EEU05813.1| Rbd2p [Saccharomyces cerevisiae JAY291]
gi|259149911|emb|CAY86714.1| Rbd2p [Saccharomyces cerevisiae EC1118]
gi|323302636|gb|EGA56442.1| Rbd2p [Saccharomyces cerevisiae FostersB]
gi|323306904|gb|EGA60188.1| Rbd2p [Saccharomyces cerevisiae FostersO]
gi|323335253|gb|EGA76542.1| Rbd2p [Saccharomyces cerevisiae Vin13]
gi|323346079|gb|EGA80369.1| Rbd2p [Saccharomyces cerevisiae Lalvin QA23]
gi|349581576|dbj|GAA26733.1| K7_Rbd2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365762680|gb|EHN04213.1| Rbd2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 262
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 14/216 (6%)
Query: 28 PPGTLT--LILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHL 85
PP LT L++ T +Y+++ + + L + A L + RL L L H HL
Sbjct: 13 PPAALTTGLVVFLTAIYLLSFIFALREDLSL---APESLFKLQMSRLSLYPLIHLSLPHL 69
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAI 145
+N++++ E G+V V ++ + + Y +L ++Y L A
Sbjct: 70 LFNVLAIWAPLNLFEETHGTVYTGVFLNLSALFAGILYCLLGKLLY-----PEVLVAGAS 124
Query: 146 GFSAVLFSMKTIRTRQ-SPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGIL 204
G+ LF+ + + Q P ++S+P +Y P + LV I +++P +SF GH G+
Sbjct: 125 GWCFTLFAYYSFKESQIRPRTRIFRTDYSIPTLYTPLVLLVAIAVVIPGSSFWGHFFGLC 184
Query: 205 VG--LCYTETSLGRLVERSGRSVSRVVNTLTNVFKL 238
VG + Y E+ + + G ++++ +L + +L
Sbjct: 185 VGYAIGYKESWFNK-ITPPGWIITKIEKSLDGLIRL 219
>gi|429239375|ref|NP_588499.2| rhomboid family protease [Schizosaccharomyces pombe 972h-]
gi|395398460|sp|O74926.2|RBD2_SCHPO RecName: Full=Rhomboid protein 2
gi|347834486|emb|CAA21293.2| rhomboid family protease [Schizosaccharomyces pombe]
Length = 251
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 13/204 (6%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
+L +R ++ H +H+ +N VSL+ + E+ G++ I+ T +
Sbjct: 50 LLQKRQLYEIITYVTLHLSMLHIVFNFVSLLPAMSQFEKKQGTLA-------CILVTVIP 102
Query: 123 YVMLSYVIYLMNHD--VTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYA 179
Y + +++L+ + + + Y G S F+ + SP N FS+PA
Sbjct: 103 YTLFPGIMHLIVYHFFLRKDYVSIAGLSGWAFAFISASCVHSPQRLISFFNLFSIPAYCF 162
Query: 180 PWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERS-GRSVSRVVNT-LTNVFK 237
P I L++ ++VP ASF GH SG ++G C T LG + +S ++V + + + N
Sbjct: 163 PIIYLIMTTILVPKASFIGHASGAVMGYC-TPFMLGSIPLKSWAQNVDPIFQSWVKNYHS 221
Query: 238 LDDDCNGDDEDSDTSASFLDFTDN 261
D + ++ ++F F
Sbjct: 222 FDQLSHAQLPIAEPLSTFSSFPGK 245
>gi|299470170|emb|CBN78198.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 305
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 85/157 (54%), Gaps = 6/157 (3%)
Query: 59 SAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIIS 118
S +L ++++ R+V +A+ HG +HL +++ SL R +E GS +++ + ++
Sbjct: 84 SYRNLLVRQEWWRVVTAAVAHGGLLHLAFSISSLW-SCRRIETELGSWGYLLASAHFVVL 142
Query: 119 TSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVY 178
V M +V+ V E+ + G+S V+F+ + + + PD +++ V + +
Sbjct: 143 AEVFEKMFMHVLLRTGRVVDEV---SCGYSGVVFAWIVVLSLR-PDAPARVIGGFVFSGF 198
Query: 179 APWI-ELVIIHLMVPNASFKGHLSGILVGLCYTETSL 214
A + LV++ +++ +SF GHL+G+ GL ++ +L
Sbjct: 199 ASVVLNLVVVRILIRQSSFVGHLAGVWAGLLFSTGAL 235
>gi|115379487|ref|ZP_01466582.1| rhomboid family protein [Stigmatella aurantiaca DW4/3-1]
gi|310822642|ref|YP_003955000.1| rhomboid family protein [Stigmatella aurantiaca DW4/3-1]
gi|115363496|gb|EAU62636.1| rhomboid family protein [Stigmatella aurantiaca DW4/3-1]
gi|309395714|gb|ADO73173.1| Rhomboid family protein [Stigmatella aurantiaca DW4/3-1]
Length = 236
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 21/158 (13%)
Query: 62 TILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSV 121
++ Q R++ A EHG +HL +NM + G LER GS + FL +S
Sbjct: 71 PLIQQGQPWRVLTYAFEHGGPIHLLFNMSAAFTLGPSLERAIGSWR------FLGLSLVT 124
Query: 122 CYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPW 181
C ++ + L + D Q +G S ++ +P T + L W
Sbjct: 125 CVGSAAFAL-LFDFD-----QPTVGASGMILGWLGALLPIAPGYTRRQLGL--------W 170
Query: 182 IELVIIHLMVPNASFKGHLSGILVGL-CYTETSLGRLV 218
+ + + ++P S+ GHL G+L GL C +G+ V
Sbjct: 171 LLQIALISLIPGVSWAGHLGGVLFGLPCGLALKMGKAV 208
>gi|344233876|gb|EGV65746.1| hypothetical protein CANTEDRAFT_112606 [Candida tenuis ATCC 10573]
Length = 284
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 19/190 (10%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
D R+ L H H N++++ ER G+V + ++ L ++ + Y +L
Sbjct: 60 DLNRVSFYVLYHTGFTHYLVNILAIAAPMCHFERAHGTVHTGITLNLLAVTAGLQYCLLG 119
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKT---IRTRQSPDVTHQL----LNFSVPAVYAP 180
+Y IG S ++FS T ++ + V+ + + S+P Y+P
Sbjct: 120 SFLYPNTR--------VIGLSGIIFSFVTYFAVKEHEFQPVSFRFPLNGTDISLPTKYSP 171
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRVVNTLTNVFKLDD 240
++ L I+ ++ P +SF GHL+GI G L L S V+ + N L + KL D
Sbjct: 172 FVSLAIVTVIFPGSSFFGHLAGISSGYLLAYGKLNILYPPSSIIVA-IENKLAGLIKLLD 230
Query: 241 ---DCNGDDE 247
D G+ E
Sbjct: 231 GLVDFVGEQE 240
>gi|328870427|gb|EGG18801.1| methionyl-tRNA synthetase beta subunit [Dictyostelium fasciculatum]
Length = 277
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 21/146 (14%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCY 123
N + RL+ S L H + +HL +NM++ I LE GSV + L+ +I++S+
Sbjct: 61 FNIYESWRLITSTLFHINLLHLLFNMMAFIPFSTLLENSCGSVLYGYLMLVFMITSSLMA 120
Query: 124 VMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIE 183
V++S IY ++ Y C IG S V+F + T+ W+
Sbjct: 121 VIISNTIYWIDPTAIS-YSCTIGLSGVVFLLVTVNCH--------------------WVT 159
Query: 184 LVIIHLMVPNASFKGHLSGILVGLCY 209
++ P +SF GHL GI+ Y
Sbjct: 160 TPRSFILFPQSSFIGHLGGIVAAYIY 185
>gi|84497160|ref|ZP_00995982.1| membrane spanning protein [Janibacter sp. HTCC2649]
gi|84382048|gb|EAP97930.1| membrane spanning protein [Janibacter sp. HTCC2649]
Length = 260
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 12/159 (7%)
Query: 71 RLVLSALEHGDD--MHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
R + SA H + +H+ +NM +L + G+ LE M G +F L SV Y++L++
Sbjct: 72 RFLTSAFAHAPNNFLHIGFNMWALWMMGQYLEPMLGRARFAALYLISAFGGSVVYLLLAF 131
Query: 129 ---VIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELV 185
+ L N D A+G S +F + + + L S +YA
Sbjct: 132 PHSIAQLNNRDYGPWETAAVGASGAVFGLFGAFL-----ILQRRLGRSAATMYATIAINA 186
Query: 186 IIHLMVPNASFKGHLSGILVGLCYTE--TSLGRLVERSG 222
+I +VP +++ HL G LVG+ LG+ E G
Sbjct: 187 VIGFVVPGIAWQAHLGGFLVGIACAAVFAYLGKRPEVGG 225
>gi|428185760|gb|EKX54612.1| hypothetical protein GUITHDRAFT_100085 [Guillardia theta CCMP2712]
Length = 572
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 103/268 (38%), Gaps = 63/268 (23%)
Query: 1 MARRFFRRELGILLLLYQVLSVGFHLIPPGTLTLILIQTLLYIMNVLA----QPWDSLGI 56
M R R G L ++ + P T L++I L Y+ + P SLGI
Sbjct: 67 MLRDLLSRREGSGPSLQDLIMEAMQRLRPTTRALLIINVLCYLFAKVGLLGKDPAASLGI 126
Query: 57 CISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLI 116
+ R+ RL+ H + HL NM++L G ++E GS +F +LVS LI
Sbjct: 127 SPDRILLYPMREGHRLLTGIFLHLNHAHLVSNMLALAALGNKVEDRIGSFKFALLVSLLI 186
Query: 117 ISTSVCY----VMLSYVIYLMNHDVTELYQ--------------------------CAIG 146
S + + V+L+ V L+ T Q +IG
Sbjct: 187 PSVGLAHVSTTVLLNAVGSLLGFKDTRQVQLGGFLPRASVHQVVRRLVMHQISLTTVSIG 246
Query: 147 FSAVLFSMKTIRTRQ--------------SPDVTHQLLNF--------------SVPAVY 178
FS +LF++ I T P++ ++ + +P+ +
Sbjct: 247 FSGILFALNAIGTEMFAGGSLFCFPLSDLPPEIRLYVVKYLRRYIEKRWGSPRLCIPSYW 306
Query: 179 APWIELVIIHLMVP-NASFKGHLSGILV 205
AP+++++I L P S GHL+G +
Sbjct: 307 APYLQVIISQLADPLRVSLCGHLAGAIA 334
>gi|357019099|ref|ZP_09081357.1| rhomboid family protein [Mycobacterium thermoresistibile ATCC
19527]
gi|356481160|gb|EHI14270.1| rhomboid family protein [Mycobacterium thermoresistibile ATCC
19527]
Length = 281
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 20/176 (11%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMV 90
T TLI + L+Y++ + + + + + +Y RLV SA H MHL +NM
Sbjct: 77 TYTLIAVNVLMYVLQRASTGFTEAFVLWAP--AVAAGEYYRLVTSAFLHFGLMHLLFNMF 134
Query: 91 SLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAV 150
+L V G LE G ++F +L + + SV ++YL+ + T G S
Sbjct: 135 ALYVIGGPLEAALGRLRFGLLYALSALGGSV-------LVYLLAMNPTA------GASGA 181
Query: 151 LFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
+F + + V + LN V V + ++I +VP S++GHL G+L G
Sbjct: 182 VFGLF-----AATYVVAKRLNLDVRFVTGLIVVNLVITFVVPGISWQGHLGGLLTG 232
>gi|401623399|gb|EJS41500.1| rbd2p [Saccharomyces arboricola H-6]
Length = 262
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 12/215 (5%)
Query: 28 PPGTLT--LILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHL 85
PP LT L++ T +++++ + D L + + L + RL L L H HL
Sbjct: 13 PPAALTTGLVVFLTAVFLLSFVFALGDDLSLAPES---LFKLQMSRLSLYPLIHLSLPHL 69
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAI 145
+N++++ E G+V V ++ + + Y +L ++Y C
Sbjct: 70 LFNVLAIWAPLNLFEETHGTVYTGVFLNLSALFAGILYCLLGKLLYPGVFVAGASGWCFT 129
Query: 146 GFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILV 205
F+ +S K + R + H +SVP +Y P L+ I ++VP +SF GH G+ V
Sbjct: 130 LFA--YYSYKESQVRPRTRLFHT--EYSVPTLYTPIALLIAIAVIVPGSSFWGHFFGLCV 185
Query: 206 G--LCYTETSLGRLVERSGRSVSRVVNTLTNVFKL 238
G + Y E+ + + G ++++ N+L + +L
Sbjct: 186 GYAIGYKESWFHK-ITPPGWIITKIENSLDGLIRL 219
>gi|66819575|ref|XP_643447.1| hypothetical protein DDB_G0275611 [Dictyostelium discoideum AX4]
gi|60471600|gb|EAL69556.1| hypothetical protein DDB_G0275611 [Dictyostelium discoideum AX4]
Length = 458
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 115 LIISTSVCYVMLSYVIYLMNH--DVT-ELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN 171
L + TSV M+++++ L+ + D+ Y C++GFS +F++ TI V+ +
Sbjct: 226 LPLMTSVLISMMNFILSLVAYYLDIGYSYYSCSVGFSGCIFALLTIHCFNDNLVSLYGIT 285
Query: 172 FSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
+P+ PW L+I + ++P SF GHLSGIL+G Y
Sbjct: 286 -RIPSKLYPWAILIITNFILPMTSFVGHLSGILIGTLY 322
>gi|281205968|gb|EFA80157.1| hypothetical protein PPL_06979 [Polysphondylium pallidum PN500]
Length = 338
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 24/199 (12%)
Query: 23 GFHLIP------PGT--LTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVL 74
GFH++ PGT + +++I LY N P+ C A + +Y+R +L
Sbjct: 102 GFHVLESLQSLTPGTSIMMMLIISIWLYQFNYDIGPYHLTSSCNRAL----KGEYRRTLL 157
Query: 75 SALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMN 134
S H +HL N VSLI + +E GS +++ LII+ V +++S +
Sbjct: 158 SIFSHSGLIHLVLNCVSLI-DLKSIEETEGSFRYLQYTFMLIITCVVVEIIISKQLSGNG 216
Query: 135 HDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNA 194
+ ++ ++G+S VLF + I T + + +++ + A+Y+ L+I + NA
Sbjct: 217 QRLMDV--ESLGYSGVLFGLLVISTFR-----YGIMSSARTALYS----LIITQIFNRNA 265
Query: 195 SFKGHLSGILVGLCYTETS 213
F GHL+GI+ G + +S
Sbjct: 266 HFIGHLAGIVAGAIISASS 284
>gi|320168488|gb|EFW45387.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 327
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
RL L H H+ NM++ + ER GS+ V+L+ L + + +V ++ ++
Sbjct: 66 RLFTHMLIHEQLWHIVLNMMTFVPLAAASERAHGSIALVLLLLELSLLGELVHVAIAALL 125
Query: 131 YLMNHDVTELYQCAIGFSAVLFSMKTI---RTRQSPDVTHQ---LLNFSVPAVYAPWIEL 184
Y +IG S V+FS+ I RT + Q F+VP+ PW L
Sbjct: 126 LAAG-FPAAYYTTSIGMSGVIFSLLVISIHRTANASAANEQRSLCAIFTVPSSVYPWALL 184
Query: 185 VIIHLMVPNASFKGHLSGILVGLCY 209
++I +P+ SF GHLSGILVG +
Sbjct: 185 LVIQAFIPSVSFLGHLSGILVGYLF 209
>gi|224132770|ref|XP_002327876.1| predicted protein [Populus trichocarpa]
gi|222837285|gb|EEE75664.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 144 AIGFSAVLFSMKTIRTRQSPDVTHQLLNF-SVPAVYAPWIELVIIHLMVPNASFKGHLSG 202
A+G+S V+F TI + + P L F S+P +AP+ L+ ++VP ASF GHLSG
Sbjct: 59 AVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSG 118
Query: 203 ILVG 206
I+VG
Sbjct: 119 IVVG 122
>gi|145332609|ref|NP_001078170.1| rhomboid-like protein 14 [Arabidopsis thaliana]
gi|332642459|gb|AEE75980.1| rhomboid-like protein 14 [Arabidopsis thaliana]
Length = 173
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 154 MKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
MK + Q+ D + + VP YA W EL+++ + VPNASF GHL GIL G+ Y
Sbjct: 1 MKVVLNSQAEDYS-SVYGILVPTKYAAWAELILVQMFVPNASFLGHLGGILAGIIY 55
>gi|255082832|ref|XP_002504402.1| predicted protein [Micromonas sp. RCC299]
gi|226519670|gb|ACO65660.1| predicted protein [Micromonas sp. RCC299]
Length = 471
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 90/234 (38%), Gaps = 53/234 (22%)
Query: 24 FHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDM 83
+ IPPGTL ++ ++ + D +C++ + +++ +RLV SA H D
Sbjct: 74 YGAIPPGTLAIVAANVAVFSLPDGVAFGD---VCLNPYAVIHLAQLERLVTSAFVHVDAF 130
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYV---IYLMNHDVTE- 139
HL NM ++ G LE + G+ +F+ + L+ + V LS+ Y +
Sbjct: 131 HLLSNMQGVLQDGSFLESLDGTPRFLARCATLLGLSQCTLVGLSWAERRFYQRGSSASRR 190
Query: 140 ------------------------------------------LYQCA-IGFSAVLFSMKT 156
Y +GFS V F++K
Sbjct: 191 ADAWLDDAVDRVSKYAYGGNSPGYHVPIRGTSSSSSAPKLLPFYNSGVVGFSGVNFALKV 250
Query: 157 IRTRQSP--DVTHQLLNFSVPAVYAPWIELVIIHLMVPNA-SFKGHLSGILVGL 207
+ P V VPA Y+ W EL + L+VP+A +F H +G + GL
Sbjct: 251 AAAHRRPANSVVLVGGLVPVPARYSAWFELALGTLIVPSAGTFAAHFAGTIAGL 304
>gi|50307309|ref|XP_453633.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74606352|sp|Q6CR06.1|RBD2_KLULA RecName: Full=Rhomboid protein 2
gi|49642767|emb|CAH00729.1| KLLA0D12804p [Kluyveromyces lactis]
Length = 271
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 21/175 (12%)
Query: 39 TLLYIMNVLAQPWDSLGICISAHTILN-----QRDYKRLVLSALEHGDDMHLYYNMVSLI 93
T L+++N L P I+ H +L + D R+ L L H HL++N++S
Sbjct: 26 TALFLVNNLVYP-------INEHLLLKPDSLFKFDLNRISLYPLAHLSFFHLFFNVISTF 78
Query: 94 VKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVL-- 151
E G++ V+++ L + T++ Y ++ +++ E+ + F + L
Sbjct: 79 SMIVMFEESHGTLYTGVILNLLAVFTAIPYCLIGSLLF----PNVEIGGASGWFFSFLGY 134
Query: 152 FSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
F++K R R S +T FS P +Y P L + L+ P +S GH G+L+G
Sbjct: 135 FAVKESRVRNSVMITS---TFSFPTLYFPVALLFVTALLAPGSSLPGHAIGLLLG 186
>gi|296268056|ref|YP_003650688.1| rhomboid family protein [Thermobispora bispora DSM 43833]
gi|296090843|gb|ADG86795.1| Rhomboid family protein [Thermobispora bispora DSM 43833]
Length = 286
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICISAHTILN----QRDYKRLVLSALEHGDD---M 83
+ TL+ I L Y+ VL D + ISA+ + + Q ++ RL+ SA H
Sbjct: 82 SWTLLAINLLAYVAEVL----DPERV-ISAYGMWSIGVYQGEWWRLITSAFLHAPPPSFW 136
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC 143
H+ +NM +L V G +LER+ GS +F L + SV IYL
Sbjct: 137 HILFNMWALYVIGPDLERLLGSARFAALYLLSALGGSV-------AIYLFGVAALGASGA 189
Query: 144 AIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGI 203
G LF + R DV L + V+I +VP S++GHL G+
Sbjct: 190 IYGLFGALF---VVARRLGTDVRGVLWLIGIN---------VLITFVVPGISWQGHLGGL 237
Query: 204 LVG 206
+ G
Sbjct: 238 VTG 240
>gi|442322030|ref|YP_007362051.1| rhomboid family protein [Myxococcus stipitatus DSM 14675]
gi|441489672|gb|AGC46367.1| rhomboid family protein [Myxococcus stipitatus DSM 14675]
Length = 241
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 21/152 (13%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
Y RLV +A EHG +HL +NM ++ G LER GS++F L + S ++
Sbjct: 82 QYWRLVAAAFEHGGILHLAFNMSVVVTLGFTLERGIGSLRFAGLSLVTALGASAFSLLFD 141
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVII 187
+ + + +G++ + + T + R+ W+ V +
Sbjct: 142 F-----DKTMVGASGMILGWAGAMLPIATRQGRRE---------------LGTWLVQVAV 181
Query: 188 HLMVPNASFKGHLSGILVGL-CYTETSLGRLV 218
++P S+ GHL G L GL C GR V
Sbjct: 182 LSLLPMVSWSGHLGGFLFGLPCGIAMRQGRRV 213
>gi|150864296|ref|XP_001383053.2| Rhomboid family proteins Function unknown [Scheffersomyces stipitis
CBS 6054]
gi|149385552|gb|ABN65024.2| Rhomboid family proteins Function unknown [Scheffersomyces stipitis
CBS 6054]
Length = 282
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 15/150 (10%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCY 123
L + D R+ L H H + N+++L E+ G+V + ++ L + T++ Y
Sbjct: 55 LGELDLNRVSFYPLFHSGLFHWFLNVLTLFQPLAIFEKTHGTVYTGITLNLLAVLTALQY 114
Query: 124 VMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQS----PDVT---HQLLNFSVPA 176
+ Y +Y H AIG SA++FS + P++ + +P
Sbjct: 115 CIAGYWLYPGTH--------AIGLSALVFSFLAWLAYKEHFVRPNIVLYRQEGSEIKLPT 166
Query: 177 VYAPWIELVIIHLMVPNASFKGHLSGILVG 206
++AP L I +++P +SF GHL+G+ G
Sbjct: 167 LFAPVAYLFISMILLPGSSFWGHLAGLFAG 196
>gi|385680095|ref|ZP_10054023.1| membrane protein [Amycolatopsis sp. ATCC 39116]
Length = 256
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 16/151 (10%)
Query: 62 TILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSV 121
I + ++ RLV+S H +HL NM++L + GR++E + G V+F VL ++ +V
Sbjct: 69 AIAGEDEWWRLVMSGFLHYGPIHLAVNMLALWILGRDMETLLGRVRFTVLYLVSLLGGAV 128
Query: 122 CYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPW 181
+ V +Y A+L ++ +R + + +LN
Sbjct: 129 AVYLFDGVDRGTAGASGAIYGL---LGAMLVAVIRLRLNPAYAIGTIVLNL--------- 176
Query: 182 IELVIIHLMVPNASFKGHLSGILVGLCYTET 212
II + +PN S GHL G++VG T
Sbjct: 177 ----IITVSLPNISLLGHLGGLVVGALVTAA 203
>gi|385303446|gb|EIF47519.1| rbd2p [Dekkera bruxellensis AWRI1499]
Length = 298
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 13/156 (8%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFL 115
+ + ++ + + RL H HL++N++SL E ER G+ +++S L
Sbjct: 55 MALKPDSLFHISELPRLSSYVWXHSGFFHLFFNVLSLWAPLAEFERTNGTFHTALVLSIL 114
Query: 116 IISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTH---QLLN- 171
+ ++ Y +L + + +G S +FS+ + + + ++H +L N
Sbjct: 115 ATAVAIPYCLLGXLFFPNT--------VVLGASGWVFSLISYFSYVN-SLSHRTVKLFNS 165
Query: 172 FSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGL 207
+ VP + P+I ++ + LMVPN+S GH GI+ G
Sbjct: 166 WEVPTLSIPFIFMLTVFLMVPNSSLIGHFLGIVTGF 201
>gi|294656613|ref|XP_458911.2| DEHA2D10252p [Debaryomyces hansenii CBS767]
gi|218511831|sp|Q6BSA9.2|RBD2_DEBHA RecName: Full=Rhomboid protein 2
gi|199431606|emb|CAG87065.2| DEHA2D10252p [Debaryomyces hansenii CBS767]
Length = 286
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 15/148 (10%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
+ D RL L H H N+V L ER G+V V ++ L ++ + + +
Sbjct: 59 EFDLNRLSFYLLFHRGFTHWLLNVVGLFSPLAIFERTNGTVFTGVTLNVLAVTAGLQFCI 118
Query: 126 LSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNF-------SVPAVY 178
+ ++Y N V IG S V+FS + + T + F S+P +Y
Sbjct: 119 VGKLLY-PNTQV-------IGLSGVVFSFMSFMAYKEHHTTPVIYTFKYQGSEVSIPTLY 170
Query: 179 APWIELVIIHLMVPNASFKGHLSGILVG 206
+P+I L++ +++P +SF GHL+GI G
Sbjct: 171 SPFIFLIVCMVLIPGSSFWGHLAGISSG 198
>gi|326432618|gb|EGD78188.1| hypothetical protein PTSG_09065 [Salpingoeca sp. ATCC 50818]
Length = 224
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 169 LLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYT---ETSLGRLVERSGRSV 225
+L VP YA W+EL++I ++ P +S GHL GILVGL Y ++ L R + R+GR+
Sbjct: 14 ILGMRVPTKYAYWVELLVIQVIAPQSSLLGHLCGILVGLAYARVLKSDLPRQL-RTGRNG 72
Query: 226 SR 227
R
Sbjct: 73 HR 74
>gi|444321935|ref|XP_004181623.1| hypothetical protein TBLA_0G01600 [Tetrapisispora blattae CBS 6284]
gi|387514668|emb|CCH62104.1| hypothetical protein TBLA_0G01600 [Tetrapisispora blattae CBS 6284]
Length = 262
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
D RL L H H+ +N+++LI E G++ VL++ IS VC VM
Sbjct: 52 DIGRLSSYPLGHMSITHIIFNILALIPLLNIFETTHGTLYTGVLLN---ISAVVCGVMYC 108
Query: 128 YVIYLMNHDVTELYQCAIGFSA-VLFSMK--TIRTRQSPDVTHQLLNFSVPAVYAPWIEL 184
+ +V+ L GF+ F++K ++R RQ T +S P + P + L
Sbjct: 109 VAGRFLYPEVSVLGASGWGFTFFAYFAVKEASVRPRQRLFGTQ----YSFPTLIGPIVTL 164
Query: 185 VIIHLMVPNASFKGHLSGILVG--LCYTETSLGRLVERSGRSVSRVVNTLTNVFKLDDD- 241
+I + VP +SF GHL G++ G + + E + ++ S + ++ L+ L
Sbjct: 165 ALIAIFVPGSSFWGHLFGMIFGYFMGWKENWVSKIAPPSWILI-KIEGWLSKPIDLIPSF 223
Query: 242 -CNGDDEDSDTSASFLDFTDNTKND 265
+E + + ++ F D+++N
Sbjct: 224 VTYHKEESMNRDSDYISFVDDSENG 248
>gi|405362758|ref|ZP_11025811.1| rhomboid family protein [Chondromyces apiculatus DSM 436]
gi|397090218|gb|EJJ21092.1| rhomboid family protein [Myxococcus sp. (contaminant ex DSM 436)]
Length = 243
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 27/194 (13%)
Query: 30 GTLTLILIQTLLYIMNVLAQPWDSLGICISA--HTILNQRDYKRLVLSALEHGDDMHLYY 87
G + + L + LL I ++ P S+ + A + Y RL+ + LEHG +HL +
Sbjct: 44 GAVGMFLAEQLLAISMRVSSPSGSIVLPPLALYGPAVQAGQYWRLLGAVLEHGGAIHLLF 103
Query: 88 NMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCA--I 145
NM ++ G LER GS++F+ L + S ++ + DV + +
Sbjct: 104 NMSVVVTLGFTLERGIGSLRFLGLSLVTALGASAFSLIFDF-------DVPTVGASGMIL 156
Query: 146 GFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILV 205
G++ + + T R+ + W+ V + ++P S+ GHL G L
Sbjct: 157 GWAGAMLPVATREGRRDLFI---------------WLAQVAVLSLLPFVSWAGHLGGFLF 201
Query: 206 GL-CYTETSLGRLV 218
GL C +GR V
Sbjct: 202 GLPCGLALRMGRQV 215
>gi|326432288|gb|EGD77858.1| hypothetical protein PTSG_09492 [Salpingoeca sp. ATCC 50818]
Length = 433
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 9/198 (4%)
Query: 19 VLSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALE 78
++ GF +P T +++ Q L +I+ + P +C+ T + RL A+
Sbjct: 4 MVQAGFGAMPLVTRVVVVFQLLGFIIGA-SFPQVIPALCLQPATAIMYFQLHRLFTYAVI 62
Query: 79 HGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM---LSYVIYLMNH 135
H + +H NM+ L++ LE GSV++ + + +V Y M L+Y+I +N
Sbjct: 63 HRNLIHFVLNMIGLLMVSSRLETSMGSVRYAHMFLAMTAVVAVTYCMGAALAYLIVGINF 122
Query: 136 DVTELYQCAIGFSAVLFSMKTIRTR--QSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPN 193
+ C IG ++ L +M I + + +P P + L+ H + P
Sbjct: 123 SFWNI--CTIGLTSPLLTMAVIYVYCFSTSSSVISVYGLQMPPTILPPLMLICTHFL-PT 179
Query: 194 ASFKGHLSGILVGLCYTE 211
SF + +G+++G Y +
Sbjct: 180 TSFWCNFTGLVMGYMYVQ 197
>gi|403385795|ref|ZP_10927852.1| hypothetical protein KJC30_13905 [Kurthia sp. JC30]
Length = 206
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 19/182 (10%)
Query: 29 PGTLTLILIQTLLYIMNVLAQPWDSL-GICISAHTILNQRDYKRLVLSALEHGDDMHLYY 87
P TLILI ++Y++ ++ + + +A+ ++ +Y RLV + HG +H+
Sbjct: 16 PAVATLILINLIVYVIGLVPRINSYIFNYGAAANWLIGAGEYWRLVTAIFIHGGFLHILS 75
Query: 88 NMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGF 147
NM L V G ELE++ G +F+ F+ + + + + +Y V +L ++G
Sbjct: 76 NMFWLYVFGPELEKIAGRARFI----FIFLMSGIIGNVATYF-------VQDLGYVSVGA 124
Query: 148 SAVLFSMKTIR---TRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGIL 204
S +F M + + QL +P V I VII + PN + H++G++
Sbjct: 125 SGAVFGMLGAYLALVYYTRHIFPQLRQMILPLV----IISVIITFLQPNVNATAHIAGLI 180
Query: 205 VG 206
G
Sbjct: 181 TG 182
>gi|108760756|ref|YP_632796.1| rhomboid family protein [Myxococcus xanthus DK 1622]
gi|108464636|gb|ABF89821.1| rhomboid family protein [Myxococcus xanthus DK 1622]
Length = 217
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
Y RL+ + LEHG +HL +NM ++ G LER GS++F L + S ++
Sbjct: 58 QYWRLLGAVLEHGSPLHLLFNMSVVVTLGFTLERGIGSLRFFGLSLVTALGASTFSLIFD 117
Query: 128 YVIYLMNHDVTELYQCA--IGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELV 185
+ DV + +G++ + + T R+ + W+ V
Sbjct: 118 F-------DVPTVGASGMILGWAGAMLPVATREGRRDLFI---------------WLAQV 155
Query: 186 IIHLMVPNASFKGHLSGILVGL-CYTETSLGRLV 218
+ ++P S+ GHL G L GL C +GR V
Sbjct: 156 AVLSLLPFVSWAGHLGGFLFGLPCGLALRMGRQV 189
>gi|320102400|ref|YP_004177991.1| rhomboid family protein [Isosphaera pallida ATCC 43644]
gi|319749682|gb|ADV61442.1| Rhomboid family protein [Isosphaera pallida ATCC 43644]
Length = 406
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 28/201 (13%)
Query: 24 FHLIPPGTLTLILIQTLLYIMNVLA----QP-WDSLGICISAHTILNQRDYKRLVLSALE 78
F + P T TLIL+ ++++ L QP + G+ + + +LNQ RL+ S
Sbjct: 94 FFQVMPATKTLILVCVAVFLLQTLGTEKGQPVIATFGLELDSQAVLNQFQVWRLITSIFL 153
Query: 79 HGDDMHLYYNMVSLIVKGRELERMFGSVQFVV--LVSFLI--ISTSVCYVMLSYVIYLMN 134
H HL +NM+ L GR LE G+ +FV+ LVS L+ ++ + Y + + L
Sbjct: 154 HEGPFHLLFNMLVLFFIGRILEHELGTREFVMVFLVSGLVGSLAQTAFYALTGPGLCL-- 211
Query: 135 HDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYA----PWIELVIIHLM 190
A G + LF + +R P++ LL F +P +I + +I
Sbjct: 212 --------GASGAVSGLFGLLALRM---PNL-QVLLFFIIPVTMRNALIAFIVIDVIFTF 259
Query: 191 VPNASFK-GHLSGILVGLCYT 210
+P + HL G+ VG+ ++
Sbjct: 260 LPGTTATLAHLGGLSVGMAHS 280
>gi|427390838|ref|ZP_18885244.1| hypothetical protein HMPREF9233_00747 [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425732574|gb|EKU95382.1| hypothetical protein HMPREF9233_00747 [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 221
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 23/210 (10%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSLG-ICISAHTILNQRDYKRLVLSALEHGDDMHLY 86
P T+ LI I +Y++ ++ W L + A I + Y R + SA H HL
Sbjct: 14 PWATVALIAINIGVYLVEMV---WSGLSQALLFAPGIAEDQPY-RFISSAFAHSGFWHLI 69
Query: 87 YNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIG 146
+NM +L + G LER G +FV+L + I +V +V+ + D + +G
Sbjct: 70 FNMYALWLMGMFLERAIGRWRFVMLYALAAIGGNV------FVLLTASEDTMGWWTGVVG 123
Query: 147 FSAVLFSMKT---IRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGI 203
S +F + + R QLL I LVI + N S++ H+ G+
Sbjct: 124 ASGAVFGLFGALFVVQRHLGRNDVQLLVIIG-------INLVIGFMPGMNISWQSHVGGL 176
Query: 204 LVGLCYTETSLGRLVERSGRSVSRVVNTLT 233
+VG +L L + GR+ S V + L
Sbjct: 177 IVGAILMAATLRPL--KKGRNASAVRDVLV 204
>gi|344299724|gb|EGW30077.1| rhomboid protein 2 [Spathaspora passalidarum NRRL Y-27907]
Length = 273
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 113/270 (41%), Gaps = 31/270 (11%)
Query: 24 FHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDM 83
F+ P T LIL +L+++NV D + ++ L + + + L L H +
Sbjct: 13 FNQTPALTAGLILFTCILFLLNVY-DVMDKSPFILYPNSPL-ELNLNAISLYLLFHTNFG 70
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC 143
H + N++ + E G++ + ++ L + T++ Y ++ ++Y +
Sbjct: 71 HWFINVLGIATPLAMYEATHGTIYTGITLNLLAVITALQYCLVGQILYP--------HTG 122
Query: 144 AIGFSAVLFSM---KTIRTRQSPDVTHQL----LNFSVPAVYAPWIELVIIHLMVPNASF 196
IG S ++FS+ + + Q+ V H + + P+I LV + +++P +SF
Sbjct: 123 VIGLSGIIFSLLSYTSYKEHQNRPVIHTYRVSSYEIKIYTLAVPFIFLVFMTILMPGSSF 182
Query: 197 KGHLSGILVGLCYTETSLGRL---------VERSGRSVSRVVNTLTNVFKLDDDCNGDDE 247
GHL+G+ G L +L +E V +++N L K +D N +
Sbjct: 183 FGHLAGVFAGFLLGMGYLKKLFPPSTAIIWIENKVEPVIKLINKLVTFVKEEDAIN---K 239
Query: 248 DSDTSASFL--DFTDNTKNDAATIVSASSR 275
S T S D + N SA +R
Sbjct: 240 RSVTYVSMFSSDLETGSVNTRPPTYSAETR 269
>gi|374815406|ref|ZP_09719143.1| rhomboid family protein [Treponema primitia ZAS-1]
Length = 207
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 32 LTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRD-YKRLVLSALEHGDDMHLYYNMV 90
L +I I L+YIM + + S ++ + IL QR Y + V HG H+ +NM+
Sbjct: 17 LYIIGINVLVYIMQRINPRFTS---YLALNPILIQRGFYWQFVTYMFAHGGISHILFNML 73
Query: 91 SLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAV 150
+L + G ++ER GS +F+V +ST + LS+VIY +G S
Sbjct: 74 ALFIFGAQVERRMGSKEFLVYY----LSTGILAGFLSFVIYWFTGSYGVF---LLGASGA 126
Query: 151 LFSMKTIRTRQSPD 164
LF+++ PD
Sbjct: 127 LFAVQLAYATFFPD 140
>gi|288931169|ref|YP_003435229.1| rhomboid family protein [Ferroglobus placidus DSM 10642]
gi|288893417|gb|ADC64954.1| Rhomboid family protein [Ferroglobus placidus DSM 10642]
Length = 260
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 45/207 (21%)
Query: 23 GFHLIPPGTLTLILIQTLLY--IMNVLA--------QPWDSLGICISAHTILNQRDYKRL 72
G++ I G +TL+ +L++ IMN LA PW +L
Sbjct: 72 GYNNIFLGIITLMFFLSLVFPQIMNFLALYPNKFYFMPW-------------------QL 112
Query: 73 VLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYL 132
V S HG H N + L+ G ELER GS +++ + I ++ Y++ S+
Sbjct: 113 VTSIFLHGSFDHYLVNAIVLLFFGGELERRLGSKRYLEIFFLSGIVGNIFYILFSF---- 168
Query: 133 MNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIH--LM 190
T + A+G S L+ + +P++ LL F +P I L + LM
Sbjct: 169 ----ATNNFAPAVGASGALYGIMGALALIAPEI-RVLLFFVIPVDIKTAILLFAAYNILM 223
Query: 191 VPNASFKG-----HLSGILVGLCYTET 212
+P +F G HL G+LVGL Y +
Sbjct: 224 LPFTAFTGVAYIAHLGGLLVGLYYGKK 250
>gi|381394664|ref|ZP_09920376.1| hypothetical protein GPUN_1385 [Glaciecola punicea DSM 14233 = ACAM
611]
gi|379329631|dbj|GAB55509.1| hypothetical protein GPUN_1385 [Glaciecola punicea DSM 14233 = ACAM
611]
Length = 211
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 72/172 (41%), Gaps = 25/172 (14%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
++ Y R++ S HG +H+ +NM L + G +LE GSV+F ++ +I ++
Sbjct: 42 LVQDGQYWRMISSGFLHGSILHIAFNMYLLYMLGPQLESALGSVRFSLMYFGALIGGTLA 101
Query: 123 YVMLSYVIYLMNHDVTELYQCAIGFSAVLF---SMKTIRTRQSPDVTHQLLNFSVPAVYA 179
+ ++ +G + +F + I +SP +LN +P
Sbjct: 102 VLSFGFM-----QPTLGASGAVLGLAGAMFITLWGRGISPTKSPVFGLVVLNLGLP---- 152
Query: 180 PWIELVIIHLMVPNASFKGHLSGILVG--LCYTETSLGR--LVERSGRSVSR 227
L++P SF GH G++ G L Y L R G+++++
Sbjct: 153 ---------LLIPGISFWGHFGGVVAGGALAYVMVWLPEHSRTRRGGKNITQ 195
>gi|46446094|ref|YP_007459.1| glpG protein [Candidatus Protochlamydia amoebophila UWE25]
gi|46399735|emb|CAF23184.1| putative glpG protein [Candidatus Protochlamydia amoebophila UWE25]
Length = 391
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 41/166 (24%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFV--VLVSFLIISTSVCYVMLSY 128
RL AL HGD HL++NM+ L+V G++LE + +++ +L++ + +TS
Sbjct: 240 RLFSPALLHGDIFHLFFNMLWLMVLGKQLELRLKASRYLLFILITGIFSNTSQ------- 292
Query: 129 VIYLMNHDVTELYQCAIGFSAVLFSMKT---IRTRQSPDVTHQL--LNFSVPAVYAPWIE 183
YLM+ +GFS +L +M T IR Q+P +QL L+FS + I
Sbjct: 293 --YLMSGS------NFVGFSGILCAMLTFIWIRQNQTPWEGYQLDRLSFSFMMFFI--IG 342
Query: 184 LVIIHL------------MVPNASFKGHLSGILVGLCYTETSLGRL 217
+ ++ L + P+ + HLSG L+G+ LGRL
Sbjct: 343 MALLQLVSLFLEKFFQIEIAPHIANTAHLSGALIGII-----LGRL 383
>gi|384251613|gb|EIE25090.1| rhomboid-domain-containing protein, partial [Coccomyxa
subellipsoidea C-169]
Length = 260
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSL----IVKGRELERMFGSVQFVVLVSF--LII 117
+ + + R++ + + H + +HL +N+ +L +++ G ++ + S LI
Sbjct: 43 VQKLELWRVLTAQVSHVELLHLLFNLSTLWSLGVIEESNGNGAKGGTRYYLQTSLVLLIF 102
Query: 118 STSVC---YVMLSYVIYLMN-HDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFS 173
S VC Y +L V+ H VT +G+SAV+F TI +R +
Sbjct: 103 SGLVCLLFYHVLGVVLRREQYHTVT-----TVGYSAVIFGWMTILSRTGVASFSVFGLAN 157
Query: 174 VPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
+P P+ LV+ +++P ASF GHLSGI+VG
Sbjct: 158 IPMWLTPFASLVLTSIIIPRASFLGHLSGIVVG 190
>gi|167518123|ref|XP_001743402.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778501|gb|EDQ92116.1| predicted protein [Monosiga brevicollis MX1]
Length = 301
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 35/180 (19%)
Query: 70 KRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYV 129
+RL L +L HGD HL +N+ + I+ +LE+ GS +F L+ + + + Y+ L+ +
Sbjct: 7 QRLFLFSLIHGDIFHLAFNLCAFIMVAPQLEKDLGSFRFAYLLLVVTLLLGLYYLFLTGI 66
Query: 130 IYLM-NHDVTELYQCAIGFSA-VLFSMK------TIRTRQSPDVTHQLLNFSVPAVYAPW 181
+ D + Y CA GFS VL M T +TR S P
Sbjct: 67 AAIFYGEDSSFWYGCATGFSGNVLACMVIWVYSFTAQTRIS---------------IGPA 111
Query: 182 IELVIIHLMVP----------NASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRVVNT 231
IEL I +M P +A+F H+ G+ VG CY + L R V+ + + V + +T
Sbjct: 112 IELPIT-IMPPVLLLLSLLFRSATFWCHVMGLAVGFCYVQGWL-RFVQLTDQHVQNLEST 169
>gi|116621336|ref|YP_823492.1| rhomboid family protein [Candidatus Solibacter usitatus Ellin6076]
gi|116224498|gb|ABJ83207.1| Rhomboid family protein [Candidatus Solibacter usitatus Ellin6076]
Length = 246
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 24 FHLIPPGTLTLILIQTLLY-IMNVLAQPW--DSLGICISAHTILNQRDYKRLVLSALEHG 80
F PPG L+++ T+++ I ++ A+ + D + ++ ++ +LV HG
Sbjct: 14 FGSFPPGVKWLLIVNTVVFLITSLFARQFGDDFRLLALAPVAVVQHFAIWQLVTYLFLHG 73
Query: 81 DDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTEL 140
HL +NM++L + G LE +G+ QF+ I VC V ++ +M + VT
Sbjct: 74 GITHLLFNMLALWMFGTPLESDWGTRQFLKYYFICGIGAGVCDVAMN---AMMGNWVTS- 129
Query: 141 YQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP-------AVYAPWIELVIIHLMVPN 193
IG S ++ + PD T L+ F P +YA IEL + +
Sbjct: 130 ---TIGASGAIYGLLLAYGVCYPDQT-VLMGFLFPIKAKYMVMIYAA-IELYLSIGVNNG 184
Query: 194 ASFKGHLSGILVGLCYTETSLGRLVER 220
S HL G++VG Y ++ L RL R
Sbjct: 185 ISNIAHLGGMVVGFVYLKSRLPRLKLR 211
>gi|260951065|ref|XP_002619829.1| hypothetical protein CLUG_00988 [Clavispora lusitaniae ATCC 42720]
gi|238847401|gb|EEQ36865.1| hypothetical protein CLUG_00988 [Clavispora lusitaniae ATCC 42720]
Length = 269
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 77 LEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHD 136
H + H N+V+L ER G+V V ++ L + T++ Y ++ +Y +
Sbjct: 61 FPHVNIFHWLINIVTLFPLLSRYERFHGTVYTGVTLNLLAVVTALQYCVVGLFLYPSD-- 118
Query: 137 VTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQL--LNFS-----VPAVYAPWIELVIIHL 189
G S + FS T + ++ + LNF+ VP +Y P+ L +I L
Sbjct: 119 ------AVAGLSGICFSFLTYFCYKEHEMKPVIMSLNFAGHELQVPTIYFPFFNLFLIAL 172
Query: 190 MVPNASFKGHLSGILVG 206
++P+ SF GHL+GI G
Sbjct: 173 IIPSTSFFGHLAGIGAG 189
>gi|311742190|ref|ZP_07716000.1| rhomboid family protein [Aeromicrobium marinum DSM 15272]
gi|311314683|gb|EFQ84590.1| rhomboid family protein [Aeromicrobium marinum DSM 15272]
Length = 283
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 25/148 (16%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCY 123
++ Y RL+ SA H +HL +NM +L + G +ER GS ++V ++L ++
Sbjct: 117 MDDGGYWRLLTSAFLHAGVLHLLFNMYALYLFGPFVERALGSARYV--AAYLTMA----- 169
Query: 124 VMLSYVIYLMNHDVTELYQCAIGFSAVLFSM----KTIRTRQSPDVTHQLLNFSVPAVYA 179
V V+YL+ T+ +G S +F + + R DV L+ +V V +
Sbjct: 170 VFSGAVVYLL----TDPRTFTVGASGAVFGLFGYALVLLVRAKQDVRTLLVLLAVNGVIS 225
Query: 180 PWIELVIIHLMVPNASFKGHLSGILVGL 207
+ PN S++GHL G + GL
Sbjct: 226 ----------LAPNISWQGHLGGFIAGL 243
>gi|383456807|ref|YP_005370796.1| rhomboid family protein [Corallococcus coralloides DSM 2259]
gi|380730049|gb|AFE06051.1| rhomboid family protein [Corallococcus coralloides DSM 2259]
Length = 252
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 25/151 (16%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
+Y RL+ EHG MHL +NM+++ G LER GS++F+ L + S +
Sbjct: 93 EYWRLLGMVFEHGGAMHLLFNMLAVYSLGASLERGIGSLRFLGLSLVTALGGS------A 146
Query: 128 YVIYLMNHDVTELYQCA--IGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELV 185
+ ++ N D + +G+ + + T + R+ H W+ V
Sbjct: 147 FALFF-NFDTVTVGASGMILGWGGAMLPILTQQGRRE----HMF-----------WLVQV 190
Query: 186 IIHLMVPNASFKGHLSGILVGL-CYTETSLG 215
+ ++P S+ GHL G + GL C +G
Sbjct: 191 AVISLLPGVSWAGHLGGFVFGLPCGMALRMG 221
>gi|190348169|gb|EDK40578.2| hypothetical protein PGUG_04676 [Meyerozyma guilliermondii ATCC
6260]
Length = 291
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
+ R+ + L H H + N++SL E++ G+V + ++ L +ST++ Y +L+
Sbjct: 80 ELNRISMYPLAHTGIFHWFVNVISLSPLLARFEKVHGTVYTGITLNLLAVSTALIYSLLA 139
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSM---KTIRTRQSPDVTHQLLN-FSVPAVYAPWIE 183
+I G SA+ FS ++ + + Q + + +P Y+ ++
Sbjct: 140 GIISPSTR--------VEGLSAICFSFLEFYALKEQSYYPIAFQWGDRYRLPTKYSAFVV 191
Query: 184 LVIIHLMVPNASFKGHLSGILVGLCYTETSL 214
L+I ++VPN+S GHL+GI G E L
Sbjct: 192 LIITFILVPNSSLLGHLAGIGSGYLLAENYL 222
>gi|389775483|ref|ZP_10193424.1| hypothetical protein UU7_05868 [Rhodanobacter spathiphylli B39]
gi|388437299|gb|EIL94105.1| hypothetical protein UU7_05868 [Rhodanobacter spathiphylli B39]
Length = 202
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 33/163 (20%)
Query: 62 TILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSV 121
I QR+Y RLV + H D MHL +NMV+L GR +E F + + + I V
Sbjct: 34 AITRQREYHRLVTYGVVHADAMHLLFNMVTLFFFGRAMESFFAARLGTLGFALFYIGGLV 93
Query: 122 CYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPW 181
++ +Y+ N + L + SAVLFS + APW
Sbjct: 94 VSILPTYLKNRANPNYRSL-GASGAVSAVLFSFVLL---------------------APW 131
Query: 182 IELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRS 224
+++ L++P + I+ + YT S+ ++RSG+
Sbjct: 132 SRIIV--LVIP-------MPAIVYAVLYTGYSI--YMDRSGQG 163
>gi|284162630|ref|YP_003401253.1| rhomboid family protein [Archaeoglobus profundus DSM 5631]
gi|284012627|gb|ADB58580.1| Rhomboid family protein [Archaeoglobus profundus DSM 5631]
Length = 225
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 34/174 (19%)
Query: 41 LYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELE 100
L+ +NVL+ PW +++ S H D HL+ NM L G ELE
Sbjct: 63 LFPINVLSMPW-------------------QIITSIFVHADFWHLFINMFVLFFFGNELE 103
Query: 101 RMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTR 160
R G +++++ I+ ++ Y++ ++ +T + A+G SA +F +
Sbjct: 104 RRLGERKYLIIFFASGIAGNLAYLVYAF--------LTNPFIPAMGASAAIFGVMGALAI 155
Query: 161 QSPDVTHQLLNFSVPAVYAPWIELVIIH--LMVPNASFKG-----HLSGILVGL 207
+P++ + +P I L I+ L++P + G HL+G+LVGL
Sbjct: 156 IAPEIRVVIFPLPIPVSIKVAILLFAIYDLLLLPFSYSTGVAHIAHLAGLLVGL 209
>gi|448088893|ref|XP_004196660.1| Piso0_003885 [Millerozyma farinosa CBS 7064]
gi|448093058|ref|XP_004197691.1| Piso0_003885 [Millerozyma farinosa CBS 7064]
gi|359378082|emb|CCE84341.1| Piso0_003885 [Millerozyma farinosa CBS 7064]
gi|359379113|emb|CCE83310.1| Piso0_003885 [Millerozyma farinosa CBS 7064]
Length = 283
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 15/146 (10%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
+ RL L H D +H N+V L E+ G+V + ++ L ++ V + ++S
Sbjct: 62 ELNRLSFYLLYHKDIIHWTLNVVGLFTPLSIFEKQHGTVYTGITLNLLTVTAGVQFSLIS 121
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTI---RTRQSPDV--THQLLN--FSVPAVYAP 180
++ H IG S V+FS + + Q + T+Q ++P +Y+P
Sbjct: 122 ALLGSSTH--------VIGLSGVVFSFLSYFAYKEHQYKPILYTYQFQGRTVNIPTLYSP 173
Query: 181 WIELVIIHLMVPNASFKGHLSGILVG 206
+I L I +++P++S GHL+G+ G
Sbjct: 174 FIVLAICAIILPSSSILGHLAGVSSG 199
>gi|282890177|ref|ZP_06298707.1| hypothetical protein pah_c014o028 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338174300|ref|YP_004651110.1| hypothetical protein PUV_03060 [Parachlamydia acanthamoebae UV-7]
gi|281499834|gb|EFB42123.1| hypothetical protein pah_c014o028 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336478658|emb|CCB85256.1| putative uncharacterized protein [Parachlamydia acanthamoebae UV-7]
Length = 393
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 40/164 (24%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLV----------- 112
+ Q + R+ AL H D HL++NM+ LIV G+++E+ G ++++ +
Sbjct: 235 IKQGEIWRVFTPALLHSDLFHLFFNMIWLIVIGKQIEQRIGKGKYILFILLTGVFSNTAQ 294
Query: 113 ------SFLIISTSVCYVMLSYVIYLMNHDVTELYQ---CAIGFSAVLFSMKTIRTRQSP 163
+FL S +C M++++ H E YQ +GF +LF + T+
Sbjct: 295 YLMSGSNFLGFSGILC-AMIAFIWVRQRHAAWEGYQVQRATLGF--ILFFIMTM------ 345
Query: 164 DVTHQLLNFSVPAVYAPWIELVIIHLMV-PNASFKGHLSGILVG 206
+ QL++F+ VI H + P + HLSG L+G
Sbjct: 346 -LGIQLISFAFE---------VIQHTAISPGIANTAHLSGALLG 379
>gi|441213690|ref|ZP_20975936.1| peptidase, S54 family [Mycobacterium smegmatis MKD8]
gi|440625654|gb|ELQ87500.1| peptidase, S54 family [Mycobacterium smegmatis MKD8]
Length = 250
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMV 90
T TLI + L++++ + A + + +I +Y RLV S H MHL +NM
Sbjct: 40 TYTLIAVNVLMFVLELAAGALKRE-LALQPASIAAYDEYYRLVTSMFLHYGAMHLLFNMW 98
Query: 91 SLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
+L V G LE+ G ++F VL + + SV MLS
Sbjct: 99 ALYVVGPPLEQWLGRLRFGVLYALSGLGGSVLVYMLS 135
>gi|338535843|ref|YP_004669177.1| rhomboid family protein [Myxococcus fulvus HW-1]
gi|337261939|gb|AEI68099.1| rhomboid family protein [Myxococcus fulvus HW-1]
Length = 212
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
Y RL+ + LEHG +HL +NM ++ G ER GS++F L + S ++
Sbjct: 53 QYWRLLGAVLEHGSPLHLLFNMSVVVTLGFTAERGIGSLRFFGLSLVTALGASTFSLIFD 112
Query: 128 YVIYLMNHDVTELYQCA--IGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELV 185
+ DV + +G++ + + T R+ + W+ V
Sbjct: 113 F-------DVPTVGASGMILGWAGAMLPVATREGRRDLFI---------------WLAQV 150
Query: 186 IIHLMVPNASFKGHLSGILVGL-CYTETSLGRLV 218
+ ++P S+ GHL G L GL C +GR V
Sbjct: 151 AVLSLLPFVSWAGHLGGFLFGLPCGLALRMGRQV 184
>gi|348528520|ref|XP_003451765.1| PREDICTED: hypothetical protein LOC100704096 [Oreochromis
niloticus]
Length = 365
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 68 DYKRLV---LSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYV 124
D+ R L AL H + L ++ +++ G ER +G+V +VL + II+ Y
Sbjct: 49 DFPRFTDVFLYALSHDELPSLLVSVALMLLLGSCQERRWGTVALLVLSTLTIIALPFLYT 108
Query: 125 MLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIEL 184
+L +++ + + ++ GFS V ++ T + RQ VT + + +P + PW+ L
Sbjct: 109 LL---LFIGGGEASRIF----GFSGVQLALFTAQCRQ---VTQRRVLRCLPVWFLPWLFL 158
Query: 185 VIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
+I L++P H I +G Y ++ +G L E
Sbjct: 159 LIGLLLLPGTPALLHFCAICIGHNYRQSFIGMLQE 193
>gi|404370657|ref|ZP_10975977.1| hypothetical protein CSBG_02042 [Clostridium sp. 7_2_43FAA]
gi|226913215|gb|EEH98416.1| hypothetical protein CSBG_02042 [Clostridium sp. 7_2_43FAA]
Length = 325
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 20/152 (13%)
Query: 59 SAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIIS 118
+ ++N + RL+ SA HG +H+++NM +L + GRE+E ++GS +++ + +
Sbjct: 174 KVNVLINSGEIYRLLTSAFLHGGIIHIFFNMSALNIIGREVEAVYGSKRYIAIYVISALG 233
Query: 119 TSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLF----SMKTIRTRQSPDVTHQLLNFSV 174
SV V YL + ++G S +F +M ++ + Q + +
Sbjct: 234 GSV-------VSYLFKPN-----SISVGASGAIFGLLGAMLIFGLKERDKIGKQYMKNIL 281
Query: 175 PAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
+ VII + +PN HL G+++G
Sbjct: 282 ETIGLN----VIIGITIPNIDNFAHLGGLILG 309
>gi|421109529|ref|ZP_15570046.1| peptidase, S54 family [Leptospira kirschneri str. H2]
gi|410005360|gb|EKO59154.1| peptidase, S54 family [Leptospira kirschneri str. H2]
Length = 198
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 30/171 (17%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
++Y L+ S H D MHL +NMVS G+ LE G ++FV+ I+ TS
Sbjct: 38 NKNYYTLLTSGFIHADWMHLIFNMVSFYSFGKNLEMTVGPIRFVLFYLGTILITSA---- 93
Query: 126 LSYVIYLMNHDVTELYQ----CAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP---AVY 178
+S+ L N + L C + F+ +LF PD++ ++ +P A+Y
Sbjct: 94 ISWRKNLNNPRYSTLGASGGVCGVLFATILF---------YPDLSLYMMFIPIPIPGAIY 144
Query: 179 APWIELVIIHLMVPNASFKG-----HLSGILVGLCYT----ETSLGRLVER 220
A + LV + + + G HL G L G+ + T LGR++
Sbjct: 145 AV-LYLVYTYFSSKSGAADGINHDAHLWGALCGIAFALLLEPTILGRVLRN 194
>gi|418696708|ref|ZP_13257713.1| peptidase, S54 family [Leptospira kirschneri str. H1]
gi|409955501|gb|EKO14437.1| peptidase, S54 family [Leptospira kirschneri str. H1]
Length = 197
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 30/171 (17%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
++Y L+ S H D MHL +NMVS G+ LE G ++FV+ I+ TS
Sbjct: 37 NKNYYTLLTSGFIHADWMHLIFNMVSFYSFGKNLEMTVGPIRFVLFYLGTILITSA---- 92
Query: 126 LSYVIYLMNHDVTELYQ----CAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP---AVY 178
+S+ L N + L C + F+ +LF PD++ ++ +P A+Y
Sbjct: 93 ISWRKNLNNPRYSTLGASGGVCGVLFATILF---------YPDLSLYMMFIPIPIPGAIY 143
Query: 179 APWIELVIIHLMVPNASFKG-----HLSGILVGLCYT----ETSLGRLVER 220
A + LV + + + G HL G L G+ + T LGR++
Sbjct: 144 AV-LYLVYTYFSSKSGAADGINHDAHLWGALCGIAFALLLEPTILGRVLRN 193
>gi|319954282|ref|YP_004165549.1| peptidase s54, rhomboid domain protein [Cellulophaga algicola DSM
14237]
gi|319422942|gb|ADV50051.1| Peptidase S54, rhomboid domain protein [Cellulophaga algicola DSM
14237]
Length = 288
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 22/205 (10%)
Query: 72 LVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIY 131
+V A HGD H+++NMV L GR +FG +FV + I + ++ LSY I+
Sbjct: 63 IVTYAFFHGDFGHIFWNMVMLYFTGRIFMNLFGERKFVNVYFLGAIFGGLLFI-LSYNIF 121
Query: 132 LMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP----AVYAPWIELVII 187
+ L IG SA + ++ +P+ +++ F+V V I+L I
Sbjct: 122 ---PALIGLNNSLIGASAAVMAVLIFVCTYTPNQEVRVILFNVKLWHVGVVFVLIDLFFI 178
Query: 188 HLMVPNASFKGHLSGILVGLCY-TETSLGRLVERSGRSVSRVVNTLTNVFKLDDDCNGDD 246
V HL G +G Y ++ + GR + G S++++++ N+FK +
Sbjct: 179 GGGVNIGGRLSHLGGAFIGYFYASQLTQGRDI---GSGFSKMLDSIQNLFK-------KE 228
Query: 247 EDSDTSASFLDFTDNTKNDAATIVS 271
+ + + T N KN T+VS
Sbjct: 229 KKAPLKTVYRKPTSNVKN---TVVS 250
>gi|319654680|ref|ZP_08008759.1| hypothetical protein HMPREF1013_05381 [Bacillus sp. 2_A_57_CT2]
gi|317393596|gb|EFV74355.1| hypothetical protein HMPREF1013_05381 [Bacillus sp. 2_A_57_CT2]
Length = 241
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
Q +Y RL+ + H H+ +N SL++ G LERM G +F++L + ++ ++
Sbjct: 55 QGEYWRLLSPIILHSGFPHVLFNSFSLVLFGPVLERMLGKTRFILLYITAGAAANIATLL 114
Query: 126 LSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELV 185
L + Y+ ++ F+A++ K + +R++ + +L ++ V
Sbjct: 115 LEPLTYIHVGASGAIFGLFGYFAAIIVFRKELLSRENSQI---ILTITIIG--------V 163
Query: 186 IIHLMVPNASFKGHLSGILVGLCYTETSL--GRLVERSG 222
I+ + PN + HL G+L G SL GR SG
Sbjct: 164 IMTFLQPNINVTAHLFGLLAGFLIGAASLAKGRTSSSSG 202
>gi|375105058|ref|ZP_09751319.1| putative membrane protein [Burkholderiales bacterium JOSHI_001]
gi|374665789|gb|EHR70574.1| putative membrane protein [Burkholderiales bacterium JOSHI_001]
Length = 195
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLS-ALEHGDDMHL 85
+PP T L+LI T +Y + V W + ++ I + + Y + S A HG MHL
Sbjct: 4 LPPVTQALMLICTAMYCLGVF---WPGIEGPLALWPIGSGQFYPWQLFSYAFLHGSMMHL 60
Query: 86 YYNMVSLIVKGRELERMFGSVQF 108
+NM+ L + G ELER++G ++
Sbjct: 61 LFNMLGLWMFGSELERLWGPKRY 83
>gi|365827061|ref|ZP_09368936.1| hypothetical protein HMPREF0975_00719 [Actinomyces sp. oral taxon
849 str. F0330]
gi|365265470|gb|EHM95232.1| hypothetical protein HMPREF0975_00719 [Actinomyces sp. oral taxon
849 str. F0330]
Length = 279
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 28/183 (15%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMV 90
T LI + Y++ VLA D+ ++ ++ + R + +A H + MHL +NM
Sbjct: 77 TKVLIGLCVAAYVVQVLAPALDAR---LAFVPVVAAGEPWRFLTTAFLHANYMHLGFNMW 133
Query: 91 SLIVKGRELERMFGSVQF--VVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-AIGF 147
+L V G LE + G +F V L+S L ST+ IY ++ T+ + +G
Sbjct: 134 ALWVLGGSLEPVLGRWRFTAVYLLSALGGSTA---------IYWLSWPDTDAWGTMTVGA 184
Query: 148 SAVLF----SMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGI 203
S +F +M ++ R D + + ++ AV I + N S++GHL G+
Sbjct: 185 SGAVFGLFSTMFVVQRRFGRDTSGIVALLAINAV---------ISFLGANISWQGHLGGL 235
Query: 204 LVG 206
+VG
Sbjct: 236 IVG 238
>gi|146413501|ref|XP_001482721.1| hypothetical protein PGUG_04676 [Meyerozyma guilliermondii ATCC
6260]
Length = 291
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
+ R+ + L H H + N++SL E++ G+V + ++ L +ST++ Y +L+
Sbjct: 80 ELNRISMYPLAHTGIFHWFVNVISLSPLLARFEKVHGTVYTGITLNLLAVSTALIYSLLA 139
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLF---SMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIE 183
+I G SA+ F ++ + + Q + + +P Y+ ++
Sbjct: 140 GIISPSTR--------VEGLSAICFLFLEFYALKEQSYYPIAFQWGDRYRLPTKYSAFVV 191
Query: 184 LVIIHLMVPNASFKGHLSGILVGLCYTETSL 214
L+I ++VPN+S GHL+GI G E L
Sbjct: 192 LIITFILVPNSSLLGHLAGIGSGYLLAENYL 222
>gi|303290999|ref|XP_003064786.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453812|gb|EEH51120.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 370
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 78/200 (39%), Gaps = 48/200 (24%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSL----------IVKGRELERMFGS 105
+C++ + +L+ +R+V SA H D HL NM L + G +E G
Sbjct: 169 VCLNPYAVLHMNQLERVVTSAFVHRDLFHLLNNMTGLGAFSVFSHCTVEDGSYVESRDGV 228
Query: 106 VQFVVLVSFLIISTSVCYVMLSYV----------------------------------IY 131
F+ + L++ + V LS+
Sbjct: 229 GSFLAQTALLLVLSQGALVTLSWAERKLTGRGGSRGASGWIDDALGGLTTTTTTTTRRSG 288
Query: 132 LMNHDVTELYQCAI-GFSAVLFSMKTIRTRQSPDVTHQLL--NFSVPAVYAPWIELVIIH 188
+ Y + GFS V +++K + + + P + LL VPA Y+ W EL +
Sbjct: 289 GGGAETLPFYSSGVVGFSGVNYALKVVASHRRPLGSRVLLLGVLPVPARYSFWCELALNT 348
Query: 189 LMVPNA-SFKGHLSGILVGL 207
L++P++ +F H +G + GL
Sbjct: 349 LLMPSSGTFAAHFAGCVAGL 368
>gi|284028038|ref|YP_003377969.1| Rhomboid family protein [Kribbella flavida DSM 17836]
gi|283807331|gb|ADB29170.1| Rhomboid family protein [Kribbella flavida DSM 17836]
Length = 246
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 16/144 (11%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
+L + RL SA H H++ N+ L G LE+M G ++FV+L + S+
Sbjct: 99 VLVDSEPWRLFTSAFTHLQIFHIFSNLFMLYQVGPLLEQMLGRLRFVLLYFLSALGGSI- 157
Query: 123 YVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWI 182
++L+ + V+ + ++ ++ I + DVT L ++ AV
Sbjct: 158 ------AVWLLANPVSSTLGASGAVLGLVGALLVISRARGMDVTWILAYVAITAV----- 206
Query: 183 ELVIIHLMVPNASFKGHLSGILVG 206
I + PN S++GHL G L G
Sbjct: 207 ----ISFLFPNISWQGHLGGFLAG 226
>gi|383316417|ref|YP_005377259.1| hypothetical protein [Frateuria aurantia DSM 6220]
gi|379043521|gb|AFC85577.1| putative membrane protein [Frateuria aurantia DSM 6220]
Length = 205
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 62 TILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSV 121
I R+Y RLV L H D H+++NM++L GR LE FG + + I V
Sbjct: 34 AISRSREYYRLVTYGLVHADVQHVFFNMLTLFFFGRALEPFFGMIMGATGFALFYIGALV 93
Query: 122 CYVMLSYVIYLMNHDVTELYQC---AIGFSAVLFS 153
V+ S YL N + Y+C + SAV+F+
Sbjct: 94 VSVLPS---YLQNRN-NPRYRCLGASGAVSAVMFA 124
>gi|170017498|ref|YP_001728417.1| small hydrophobic molecule transporter protein, putative
[Leuconostoc citreum KM20]
gi|414597489|ref|ZP_11447055.1| Membrane-associated serine protease [Leuconostoc citreum LBAE E16]
gi|169804355|gb|ACA82973.1| Small hydrophobic molecule transporter protein, putative
[Leuconostoc citreum KM20]
gi|390481770|emb|CCF29116.1| Membrane-associated serine protease [Leuconostoc citreum LBAE E16]
Length = 229
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 25/167 (14%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
I + + Y RL+ H MH+ NM++L G ER FGS +F++L +F I ++
Sbjct: 54 IAHNQAYWRLLTPVFLHAGIMHIVTNMLTLWFVGPIAERAFGSWRFLMLYAFGGIVGNIF 113
Query: 123 YVMLSYVIYLMNHDVTELYQCAIGFSAVLFSM------KTIRTRQSPDVTHQLLNFSVPA 176
+LS + ++G S+ LF+M +R R +P + Q F +
Sbjct: 114 SYLLSPL------------AISVGASSALFAMFAGLILYGVRYRDNPTIRAQGATFLLFV 161
Query: 177 VYAPWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGR 223
V + L+ P GH+ G++ G+ T LG V +SG+
Sbjct: 162 VLN-----LFSGLLAPTIDLWGHIGGLIGGMMST-VMLG-FVGKSGQ 201
>gi|418678720|ref|ZP_13239994.1| peptidase, S54 family [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|418685906|ref|ZP_13247077.1| peptidase, S54 family [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418743050|ref|ZP_13299419.1| peptidase, S54 family [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|421089354|ref|ZP_15550165.1| peptidase, S54 family [Leptospira kirschneri str. 200802841]
gi|421131426|ref|ZP_15591608.1| peptidase, S54 family [Leptospira kirschneri str. 2008720114]
gi|400321910|gb|EJO69770.1| peptidase, S54 family [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410001967|gb|EKO52493.1| peptidase, S54 family [Leptospira kirschneri str. 200802841]
gi|410357209|gb|EKP04476.1| peptidase, S54 family [Leptospira kirschneri str. 2008720114]
gi|410739601|gb|EKQ84328.1| peptidase, S54 family [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410749793|gb|EKR06777.1| peptidase, S54 family [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 197
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 30/171 (17%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
++Y L+ S H D MHL +NMVS G+ LE G ++F++ I+ TS
Sbjct: 37 NKNYYTLLTSGFIHADWMHLIFNMVSFYSFGKNLEMTVGPIRFILFYLGTILITSA---- 92
Query: 126 LSYVIYLMNHDVTELYQ----CAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP---AVY 178
+S+ L N + L C + F+ +LF PD++ ++ +P A+Y
Sbjct: 93 ISWRKNLNNPRYSTLGASGGVCGVLFATILF---------YPDLSLYMMFIPIPIPGAIY 143
Query: 179 APWIELVIIHLMVPNASFKG-----HLSGILVGLCYT----ETSLGRLVER 220
A + LV + + + G HL G L G+ + T LGR++
Sbjct: 144 AV-LYLVYTYFSSKSGAADGINHDAHLWGALCGIAFALLLEPTILGRVLRN 193
>gi|433640241|ref|YP_007286000.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140070008]
gi|432156789|emb|CCK54054.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140070008]
Length = 249
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 26/189 (13%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYY 87
P T TLIL+ L+++M V + + + + + + Y RLV SA H MHL
Sbjct: 37 PVVTYTLILLNALVFVMQVTVMGLERQ-LALWPPAVASGQTY-RLVTSAFLHYGAMHLLL 94
Query: 88 NMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGF 147
NM +L V G LE G ++F L + + SV L Y+I +N G
Sbjct: 95 NMWALYVVGPPLEMWLGRLRFGALYAVSALGGSV----LVYLIAPLNTATAGASGAVFG- 149
Query: 148 SAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHL----MVPNASFKGHLSGI 203
LF + R+ L+ V V + L++I+L + P S++GH+ G+
Sbjct: 150 ---LFGATFMVARR--------LHLDVRWV----VALIVINLAFTFLAPAISWQGHVGGL 194
Query: 204 LVGLCYTET 212
+ G T
Sbjct: 195 VTGALVAAT 203
>gi|421876784|ref|ZP_16308338.1| Membrane-associated serine protease [Leuconostoc citreum LBAE C10]
gi|372557462|emb|CCF24458.1| Membrane-associated serine protease [Leuconostoc citreum LBAE C10]
Length = 229
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 25/167 (14%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
I + + Y RL+ H MH+ NM++L G ER FGS +F++L +F I ++
Sbjct: 54 IAHNQAYWRLLTPVFLHAGIMHIVTNMLTLWFVGPIAERAFGSWRFLMLYAFGGIVGNIF 113
Query: 123 YVMLSYVIYLMNHDVTELYQCAIGFSAVLFSM------KTIRTRQSPDVTHQLLNFSVPA 176
+LS + ++G S+ LF+M +R R +P + Q F +
Sbjct: 114 SYLLSPL------------AISVGASSALFAMFAGLILYGVRYRDNPTIRAQGATFLLFV 161
Query: 177 VYAPWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGR 223
V + L+ P GH+ G++ G+ T LG V +SG+
Sbjct: 162 VLN-----LFSGLLAPTIDLWGHIGGLIGGMMST-VMLG-FVGKSGQ 201
>gi|365758129|gb|EHM99987.1| Rbd2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 324
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 100/216 (46%), Gaps = 14/216 (6%)
Query: 28 PPGTLT--LILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHL 85
PP L+ L++ T +Y++ + D L + A L + RL L L H HL
Sbjct: 75 PPAALSTGLVVFLTAVYLLGFVFDLRDDLSL---APESLFKLQMSRLSLYPLIHLSLPHL 131
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAI 145
+N++++ E G+V V ++ + + Y ++ ++Y +V+ A
Sbjct: 132 LFNILAIWAPLNLFEETHGTVFTGVFLNMSALFAGILYCLVGKLLY---PEVS--VAGAS 186
Query: 146 GFSAVLFSMKTIRTRQ-SPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGIL 204
G+ LF+ + + Q P ++S+P +Y P L+ I +++P +SF GH G+
Sbjct: 187 GWCFTLFAYYSFKESQVRPRTRIFRTDYSIPTLYTPVALLIAIAIIIPGSSFWGHFFGLC 246
Query: 205 VG--LCYTETSLGRLVERSGRSVSRVVNTLTNVFKL 238
VG + Y E+ ++ G ++++ N L + +L
Sbjct: 247 VGYAIGYKESWFHKITP-PGWIIAKIENVLDGLIRL 281
>gi|323351912|gb|EGA84451.1| Rbd2p [Saccharomyces cerevisiae VL3]
Length = 196
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 11/176 (6%)
Query: 28 PPGTLT--LILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHL 85
PP LT L++ T +Y+++ + + L + A L + RL L L H HL
Sbjct: 13 PPAALTTGLVVFLTAIYLLSFIFALREDLSL---APESLFKLQMSRLSLYPLIHLSLPHL 69
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAI 145
+N++++ E G+V V ++ + + Y +L ++Y L A
Sbjct: 70 LFNVLAIWXPLNLFEETHGTVYTGVFLNLSALFAGILYCLLGKLLY-----PEVLVAGAS 124
Query: 146 GFSAVLFSMKTIRTRQ-SPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHL 200
G+ LF+ + + Q P ++S+P +Y P + LV I +++P +SF GH
Sbjct: 125 GWCFTLFAYYSFKESQIRPRTRIFRTDYSIPTLYTPLVLLVAIAVVIPGSSFWGHF 180
>gi|298713038|emb|CBJ48813.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 379
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 69/166 (41%), Gaps = 5/166 (3%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
R+V + G + + +++ G LER GS + L++ L + T++ ++ L YV+
Sbjct: 36 RVVTTVFCSGGLLAVILGLMNFNTVGPNLERSLGSTGLLALMATLTVVTNLAFIALCYVL 95
Query: 131 YLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQ--LLNFSVPAVYAPWIELVIIH 188
++ Y + G +L ++ + +PDV + +L + +P Y P I
Sbjct: 96 VILGEKKYAFYSSS-GIWNLLVALIAVECMATPDVPRRFFILPWDIPGKYYPLFLACIFG 154
Query: 189 LMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRVVNTLTN 234
M ++ + +G Y + L RL R S L N
Sbjct: 155 FM--RGAWMDLFCAVGIGYAYADGRLDRLKPSRSRLASWESGCLAN 198
>gi|260579595|ref|ZP_05847464.1| membrane protein [Corynebacterium jeikeium ATCC 43734]
gi|258602236|gb|EEW15544.1| membrane protein [Corynebacterium jeikeium ATCC 43734]
Length = 214
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 20/163 (12%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
++ R++ +A H D HL +NM+ + + GR++ER +G VV++S ++ S + +
Sbjct: 45 EWWRILTAAFVHLDPAHLGFNMLLIFLIGRDVERFYGP---VVMLSLIVASAAGGALACM 101
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVII 187
Y + N V G A+L S+ IR R D+ ++ V Y+
Sbjct: 102 Y--FQPNVPVGGASTVGYGLFAMLISLSRIRQR---DLRGPIILLLVNLGYS-------- 148
Query: 188 HLMVPNASFKGHLSGILVG--LCYTETSLGRLVERS-GRSVSR 227
LM N S GH+ G+ G + + +++G G S+SR
Sbjct: 149 -LMYSNVSLWGHIGGLAGGAVIAFITSTVGEQGNGGVGASISR 190
>gi|433460288|ref|ZP_20417921.1| S54 family peptidase [Halobacillus sp. BAB-2008]
gi|432191744|gb|ELK48676.1| S54 family peptidase [Halobacillus sp. BAB-2008]
Length = 253
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 87/205 (42%), Gaps = 24/205 (11%)
Query: 13 LLLLYQVLS--VGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYK 70
L Y V+S VG HL+ L L+ L + AQ W + G+ ++ +LN +Y
Sbjct: 11 FLKFYPVISFLVGLHLV------LWLLMDFLQLG--FAQEWKAWGMGVNVF-VLNG-EYW 60
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
RLV H H +N SL++ G LE+M G V+F+ L F I+ +V ++
Sbjct: 61 RLVTPIFLHAGFAHALFNSFSLVLFGPALEQMLGKVKFIALYLFAGIAGNVGTFIVD--- 117
Query: 131 YLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLM 190
Y +G S +F + + + H L++ + + + L +
Sbjct: 118 -------PSAYYAHLGASGAIFGIFGVYIFMVWNRKH-LIDQANSQIIGVIVALGLFMTF 169
Query: 191 V-PNASFKGHLSGILVGLCYTETSL 214
V PN + GHL G++ G L
Sbjct: 170 VRPNINILGHLFGLIGGFAIAPVVL 194
>gi|398341143|ref|ZP_10525846.1| intramembrane serine protease [Leptospira kirschneri serovar Bim
str. 1051]
Length = 198
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 30/171 (17%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
++Y L+ S H D MHL +NMVS G+ LE G ++F++ I+ TS
Sbjct: 38 NKNYYTLLTSGFIHADWMHLIFNMVSFYSFGKNLEMTVGPIRFILFYLGTILITSA---- 93
Query: 126 LSYVIYLMNHDVTELYQ----CAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP---AVY 178
+S+ L N + L C + F+ +LF PD++ ++ +P A+Y
Sbjct: 94 ISWRKNLNNPRYSTLGASGGICGVLFATILF---------YPDLSLYMMFIPIPIPGAIY 144
Query: 179 APWIELVIIHLMVPNASFKG-----HLSGILVGLCYT----ETSLGRLVER 220
A + LV + + + G HL G L G+ + T LGR+
Sbjct: 145 AV-LYLVYTYFSSKSGAADGINHDAHLWGALCGIAFALLLEPTILGRVFRN 194
>gi|403251941|ref|ZP_10918256.1| putative membrane protein [actinobacterium SCGC AAA027-L06]
gi|402914686|gb|EJX35694.1| putative membrane protein [actinobacterium SCGC AAA027-L06]
Length = 178
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 32/155 (20%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCY 123
+N + RL+ AL HG +HL +NM++L G +E FG +++ F+++++ V
Sbjct: 37 INNGQWYRLLTVALVHGGWLHLLFNMLALYSLGFTIENYFGKNKYI----FILLTSLVFG 92
Query: 124 VMLSYVIYLMNHDVTELYQCAIGFSAVLFS----MKTIRTRQSPDVTHQL----LNFSVP 175
+ SY+ L A+G S ++F + I R ++ L LN +P
Sbjct: 93 SLTSYLF-------NPLTSFAVGSSGMIFGLFGCLLVIGKRMGANLREGLGLIGLNLVIP 145
Query: 176 AVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYT 210
V +P +K HL G++ G+ T
Sbjct: 146 FV-------------IPGIDWKAHLGGLVGGVLAT 167
>gi|410940231|ref|ZP_11372047.1| peptidase, S54 family [Leptospira noguchii str. 2006001870]
gi|410784675|gb|EKR73650.1| peptidase, S54 family [Leptospira noguchii str. 2006001870]
Length = 199
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 34/169 (20%)
Query: 58 ISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLII 117
+S + + ++Y L+ S H D MHL +NMVS GR LE G + FV+ I+
Sbjct: 29 LSPYRLNRNKNYYTLLTSGFIHADWMHLIFNMVSFYSFGRNLEMTVGPIWFVLFYLGTIL 88
Query: 118 STSVCYVMLSYVIYLMNHDVTELYQ--------CAIGFSAVLFSMKTIRTRQSPDVTHQL 169
TSV + + N D LY C + F+ +LF PD++ +
Sbjct: 89 ITSV-------ISWRKNLD-NPLYSTLGASGGVCGVLFATILF---------YPDLSLYM 131
Query: 170 LNFSVP---AVYAPWIELVIIHLMVPNASFKG-----HLSGILVGLCYT 210
+ +P A+YA + LV + ++ G HL G L G+ +
Sbjct: 132 MFIPIPIPGAIYAV-LYLVYTYFSSRGSAADGINHDAHLWGALCGIAFA 179
>gi|371944005|gb|AEX61833.1| putative rhomboid protein [Megavirus courdo7]
Length = 152
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 22/134 (16%)
Query: 79 HGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVT 138
H + HL N +SL LE + G QF + + F+ + +S+ ++Y+++ +
Sbjct: 28 HANIEHLIANSISLYYLSF-LEDLLGHTQFAIAIIFIWLVSSM-------ILYIIHAIMP 79
Query: 139 ELYQCAIGFSAVLFSMKTI---RTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNAS 195
+GFS V+F + I Q+P +T L S+ + L+VP S
Sbjct: 80 SRKVYTVGFSGVIFGLIVIYYFSLNQNPGITMTGLIISI-----------LPQLVVPGIS 128
Query: 196 FKGHLSGILVGLCY 209
F+GHLSGI+ G+ Y
Sbjct: 129 FEGHLSGIIAGVIY 142
>gi|300120076|emb|CBK19630.2| unnamed protein product [Blastocystis hominis]
Length = 152
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 107 QFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVT 166
F V+ F II+ + YV++ ++ L+N + LY A GFS V+FS+ + T T
Sbjct: 1 MFYVIFLFTIIN-GLLYVLIYKLLSLINS--SFLYVAAAGFSGVIFSLLLVMTYVIDVDT 57
Query: 167 HQLLN-FSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
+ FSVP + I L+++ +++P SF GHL GIL G
Sbjct: 58 LSIFGLFSVPRKWYAIIYLILMSVLIPGVSFIGHLCGILSG 98
>gi|118467848|ref|YP_889287.1| rhomboid family protein [Mycobacterium smegmatis str. MC2 155]
gi|399989299|ref|YP_006569649.1| membrane protein in rhomboid family [Mycobacterium smegmatis str.
MC2 155]
gi|118169135|gb|ABK70031.1| rhomboid family protein [Mycobacterium smegmatis str. MC2 155]
gi|399233861|gb|AFP41354.1| Conserved membrane protein in rhomboid family [Mycobacterium
smegmatis str. MC2 155]
Length = 250
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMV 90
T TLI + L++++ + +S + + + +Y RLV S H MHL +NM
Sbjct: 40 TYTLIAVNVLMFVLQIAGGDLESR-LTLWPPALALHDEYYRLVTSMFLHYGAMHLLFNMW 98
Query: 91 SLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
+L V G LE+ G +F VL + + SV MLS
Sbjct: 99 ALYVVGPPLEKWLGLTRFGVLYALSGLGGSVLVYMLS 135
>gi|428179463|gb|EKX48334.1| hypothetical protein GUITHDRAFT_136846 [Guillardia theta CCMP2712]
Length = 331
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 15/131 (11%)
Query: 96 GRELERMFGSVQFVVLVSFLIISTSV----CYVMLSYVIYLMNHDVTELYQCAIGFSAVL 151
G + ERMFG++ F L F++I+ S + L + L + CA G +
Sbjct: 72 GSQFERMFGTLAFGYL--FMVINVSANILFTFAALFFAPILPEMHLLSPLNCANGLWVSV 129
Query: 152 FSMKTIRTRQSPDVTHQLLNF----SVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGL 207
+ I T++SP H ++F ++P + PW L++ L+ AS +L GILVG
Sbjct: 130 LAFLVIHTQRSP---HPFMSFWGLCNIPTKFYPWFLLILFALL--GASVLENLCGILVGY 184
Query: 208 CYTETSLGRLV 218
+ L R++
Sbjct: 185 AFQFGYLERVM 195
>gi|363540224|ref|YP_004894693.1| mg642 gene product [Megavirus chiliensis]
gi|448825630|ref|YP_007418561.1| putative rhomboid protein [Megavirus lba]
gi|350611389|gb|AEQ32833.1| putative rhomboid protein [Megavirus chiliensis]
gi|425701565|gb|AFX92727.1| putative rhomboid protein [Megavirus courdo11]
gi|444236815|gb|AGD92585.1| putative rhomboid protein [Megavirus lba]
Length = 163
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 22/134 (16%)
Query: 79 HGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVT 138
H + HL N +SL LE + G QF + + F+ + +S+ ++Y+++ +
Sbjct: 39 HANIEHLIANSISLYYLSF-LEDLLGHTQFAIAIIFIWLVSSM-------ILYIIHAIMP 90
Query: 139 ELYQCAIGFSAVLFSMKTI---RTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNAS 195
+GFS V+F + I Q+P +T L S+ + L+VP S
Sbjct: 91 SRKVYTVGFSGVIFGLIVIYYFSLNQNPGITMTGLIISI-----------LPQLVVPGIS 139
Query: 196 FKGHLSGILVGLCY 209
F+GHLSGI+ G+ Y
Sbjct: 140 FEGHLSGIIAGVIY 153
>gi|380484641|emb|CCF39867.1| rhomboid protein 2 [Colletotrichum higginsianum]
Length = 203
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 79 HGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL-VSFLIISTSVCYVMLSYVIYLMNHDV 137
H + +H N+++L E FG++ + L + L +V YV++ ++ N V
Sbjct: 8 HKNFIHAIMNLLALTPLMERFEAEFGTLTSIALFIGPLSTIPAVLYVLIERFLFKGNVGV 67
Query: 138 TELYQCAIGFSAVLFSMKTIRT-RQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASF 196
A + +L M+ IRT + +P +T + +S+P P I ++++ +VP S
Sbjct: 68 ----MGASVWVFLLLGMEAIRTSKTNPQLT--IATYSIPMWTTPLILILVVTALVPGTSL 121
Query: 197 KGHLSGILVGLCY 209
GHL G+LVG +
Sbjct: 122 LGHLCGVLVGYLF 134
>gi|154508338|ref|ZP_02043980.1| hypothetical protein ACTODO_00835 [Actinomyces odontolyticus ATCC
17982]
gi|153797972|gb|EDN80392.1| peptidase, S54 family [Actinomyces odontolyticus ATCC 17982]
Length = 231
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 78/189 (41%), Gaps = 43/189 (22%)
Query: 26 LIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHL 85
L+P L+L L+ L +A PW T+L A HG MH+
Sbjct: 32 LVPTTKLSLALVPARL-----MAHPW----------TVLT---------GAFLHGGIMHI 67
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAI 145
+NM+SL GR +E + G +F+ L +L+ + +L + + +E++ +
Sbjct: 68 LFNMLSLYWVGRAIEPVLGRWRFLTL--YLVSALGGSAFILVWCLI----QPSEIFVSTV 121
Query: 146 GFSAVLFSM----KTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLS 201
G S +F + ++ D T L + VY MV S++GH+
Sbjct: 122 GASGAVFGLFGAVFVLQRLGGSDTTAILTLLGINLVYG---------FMVSGISWQGHIG 172
Query: 202 GILVGLCYT 210
G + G+C T
Sbjct: 173 GAIAGVCAT 181
>gi|367009458|ref|XP_003679230.1| hypothetical protein TDEL_0A06870 [Torulaspora delbrueckii]
gi|359746887|emb|CCE90019.1| hypothetical protein TDEL_0A06870 [Torulaspora delbrueckii]
Length = 267
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 6/137 (4%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
RL L H HL++N++SL+ E G+V V+++ + T + Y + +
Sbjct: 53 RLSNYPLAHLSFFHLFFNVISLMGPLNLFESQHGTVHTGVVLNLAAVITGLLYCLFGRLA 112
Query: 131 YLMNHDVTELYQCAIGFSAVLFSMKTIRTRQ-SPDVTHQLLNFSVPAVYAPWIELVIIHL 189
Y D + A G+ +F ++ P NF+ P V +P + L++I +
Sbjct: 113 Y---PDAS--VAGASGWCFTMFGYFGLKESALHPRYHIPGSNFAFPTVLSPLVLLILISI 167
Query: 190 MVPNASFKGHLSGILVG 206
VP SF GH ++VG
Sbjct: 168 FVPGVSFWGHFFALMVG 184
>gi|363748985|ref|XP_003644710.1| hypothetical protein Ecym_2141 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888343|gb|AET37893.1| Hypothetical protein Ecym_2141 [Eremothecium cymbalariae
DBVPG#7215]
Length = 262
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 10/180 (5%)
Query: 29 PGTLT--LILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLY 86
PG L+ L + TLLYI+N + P ++ GI +S + L + RL L L H HL
Sbjct: 14 PGALSSGLCIFLTLLYILNWVF-PINN-GILLSTAS-LKKIQLNRLTLYPLAHLSLAHLV 70
Query: 87 YNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIG 146
+N +SL + E + G+ ++++ L + T+V Y +L +++ N V A G
Sbjct: 71 FNCMSLFPQLTIFEAVHGTFYTAIVLNMLALFTAVFYCLLG-MLFFPNSQVGG----ASG 125
Query: 147 FSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
+ L + + + N +P + P I +V++ L++P +SF GH+ G+ +G
Sbjct: 126 WCFSLLGYYSAKESELRPYYQVTANHKIPTILFPLILVVLLSLLLPQSSFWGHIIGLCLG 185
>gi|308197805|gb|ADO17919.1| rhomboid protease 1 [Mycobacterium smegmatis]
Length = 296
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMV 90
T TLI + L++++ + +S + + + +Y RLV S H MHL +NM
Sbjct: 86 TYTLIAVNVLMFVLQIAGGDLESR-LTLWPPALALHDEYYRLVTSMFLHYGAMHLLFNMW 144
Query: 91 SLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
+L V G LE+ G +F VL + + SV MLS
Sbjct: 145 ALYVVGPPLEKWLGLTRFGVLYALSGLGGSVLVYMLS 181
>gi|299538296|ref|ZP_07051581.1| hypothetical protein BFZC1_19855 [Lysinibacillus fusiformis ZC1]
gi|424736343|ref|ZP_18164803.1| hypothetical protein C518_0957 [Lysinibacillus fusiformis ZB2]
gi|298726498|gb|EFI67088.1| hypothetical protein BFZC1_19855 [Lysinibacillus fusiformis ZC1]
gi|422949946|gb|EKU44319.1| hypothetical protein C518_0957 [Lysinibacillus fusiformis ZB2]
Length = 207
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 29 PGTLTLILIQTLLYIMNVLAQPWDSLGIC-----ISAHTILNQRDYKRLVLSALEHGDDM 83
P TLI I LY+++++ S+G I A+ ++ ++ R+ + H M
Sbjct: 16 PVVSTLIAINLTLYVLSLI----PSIGTLLWNYGIQANFLIQSGEWWRVFSAIFLHAGFM 71
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC 143
H+++NM SL + G ELE++ G +F+ + + + + M +Y+ Y ++
Sbjct: 72 HVFFNMFSLYLFGPELEKIAGKARFITIY----LVSGIVGNMATYIFYDSSYASLGASGA 127
Query: 144 AIG-FSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSG 202
G F A F TR++ + +L+ +P + + VI+ + PN + HL G
Sbjct: 128 IFGIFGA--FGALVYYTRRTMPMLRKLI---LPII----VISVIMTFLQPNVNVFAHLGG 178
Query: 203 ILVGLC 208
++ G
Sbjct: 179 LVTGFI 184
>gi|418048760|ref|ZP_12686847.1| Peptidase S54, rhomboid domain protein [Mycobacterium rhodesiae
JS60]
gi|353189665|gb|EHB55175.1| Peptidase S54, rhomboid domain protein [Mycobacterium rhodesiae
JS60]
Length = 248
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 16/139 (11%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
+Y RLV SA H +HL +NM +L V G LE G ++F L + + SV L+
Sbjct: 75 EYYRLVTSAFMHYGALHLLFNMWALYVIGPPLESWLGRLRFGALYALSALGGSVLVYWLA 134
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVII 187
+ ++ F A K +R V + N +I+
Sbjct: 135 PIGAATAGASGAIFGL---FGATFVLAKHLRLDMRWLVAIIVAN-------------LIL 178
Query: 188 HLMVPNASFKGHLSGILVG 206
VP+ S++GH+ G++VG
Sbjct: 179 TFTVPSISWQGHIGGLVVG 197
>gi|68535096|ref|YP_249801.1| hypothetical protein jk0034 [Corynebacterium jeikeium K411]
gi|68262695|emb|CAI36183.1| putative membrane protein [Corynebacterium jeikeium K411]
Length = 241
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
++ R++ +A H D HL +NM+ + + GR++ER +G VV++S ++ S + +
Sbjct: 72 EWWRILTAAFVHLDPAHLGFNMLLIFLIGRDVERFYGP---VVMLSLIVASAAGGALACM 128
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVII 187
Y + N V G A+L S+ IR R D+ ++ V Y+
Sbjct: 129 Y--FQPNVPVGGASTVGYGLFAMLISLSRIRQR---DLRGPIILLLVNLGYS-------- 175
Query: 188 HLMVPNASFKGHLSGILVG 206
LM N S GH+ G+ G
Sbjct: 176 -LMYSNVSLWGHIGGLAGG 193
>gi|269954822|ref|YP_003324611.1| Rhomboid family protein [Xylanimonas cellulosilytica DSM 15894]
gi|269303503|gb|ACZ29053.1| Rhomboid family protein [Xylanimonas cellulosilytica DSM 15894]
Length = 282
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 29/183 (15%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDM--HLYYN 88
T TLI I + +++ + W +L + R + +A H H+ +N
Sbjct: 80 TFTLIGICAVSFVLQLAVPGWTQQ---FMYAPVLGVGEPFRFLTAAFLHSTGFFGHILFN 136
Query: 89 MVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFS 148
M +L V G+ LE + G +F+ L I SV ++L+ + Q +G S
Sbjct: 137 MWALYVTGQFLEPVLGRARFIALCVLSAIGGSVAVLLLASPV-----------QAVVGAS 185
Query: 149 AVLF----SMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGIL 204
++F +M + R + + ++ V I +VP S++GHL G++
Sbjct: 186 GMVFGLFGAMVPVLRRLGGNAAQIIGLIAINGV---------IGFLVPGISWQGHLGGLV 236
Query: 205 VGL 207
VGL
Sbjct: 237 VGL 239
>gi|441518028|ref|ZP_20999756.1| hypothetical protein GOHSU_24_00060 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441455057|dbj|GAC57717.1| hypothetical protein GOHSU_24_00060 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 244
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL 111
+Y RL+ S H HL NM+SL + GRELER+FG +++ +
Sbjct: 69 EYWRLLTSGFLHSSVPHLALNMISLYIVGRELERLFGPARYLTI 112
>gi|312193973|ref|YP_004014034.1| rhomboid family protein [Frankia sp. EuI1c]
gi|311225309|gb|ADP78164.1| Rhomboid family protein [Frankia sp. EuI1c]
Length = 390
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
I + +Y RLV +A HG +H+ +NM +L + G +LE + G V+++ L I +
Sbjct: 217 IAQKHEYWRLVTAAFLHGSVLHIAFNMYALFLLGTQLEAILGRVRYLALFFACAIGGNT- 275
Query: 123 YVMLSYVIY 131
LSYVI+
Sbjct: 276 ---LSYVIH 281
>gi|423315755|ref|ZP_17293660.1| hypothetical protein HMPREF9699_00231 [Bergeyella zoohelcum ATCC
43767]
gi|405585471|gb|EKB59295.1| hypothetical protein HMPREF9699_00231 [Bergeyella zoohelcum ATCC
43767]
Length = 243
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 24 FHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYK--RLVLSALEHGD 81
F IPP ++L+ +++++ P L ++A+ ++Q D+K +++ HGD
Sbjct: 3 FRNIPPAVKAILLLNAIVFVLTQFLFP--PLKTFLAAYYPMSQ-DFKIWQIITHMFVHGD 59
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFV 109
MH+ +NM++L G LER+ G +F+
Sbjct: 60 FMHILFNMLTLFSFGPVLERIMGQKKFI 87
>gi|194337873|ref|YP_002019667.1| rhomboid family protein [Pelodictyon phaeoclathratiforme BU-1]
gi|194310350|gb|ACF45050.1| Rhomboid family protein [Pelodictyon phaeoclathratiforme BU-1]
Length = 273
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
Query: 23 GFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTIL------NQRDYKRLVLSA 76
GF +PP T+I+I ++++ Q + LG I A L N + ++ L
Sbjct: 12 GFQFMPPAIKTIIIINVAVFLL----QFFTPLGAIIQALGALWPIGSSNFQLWQPLTYMF 67
Query: 77 LEHGDDMHLYYNMVSLIVKGRELERMFGSVQF 108
L HG+ HL++NM +L + G E+E +G+ QF
Sbjct: 68 L-HGNGTHLFFNMFALWMFGAEIENQWGTRQF 98
>gi|220910797|ref|YP_002486106.1| rhomboid family protein [Arthrobacter chlorophenolicus A6]
gi|219857675|gb|ACL38017.1| Rhomboid family protein [Arthrobacter chlorophenolicus A6]
Length = 292
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 26/168 (15%)
Query: 51 WDSLGIC-ISAHTILNQRDYKRLVLSALEH--GDDMHLYYNMVSLIVKGRELERMFGSVQ 107
+ SLG I A Q + R++ +A H G +H+ NM L + G+ LE + G V+
Sbjct: 103 YQSLGFANIYAEPRYGQFEPWRMLTAAFLHSQGFILHIALNMYMLWIFGQALEPLLGRVR 162
Query: 108 FVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSM---KTIRTRQSPD 164
F+ + + SV Y++L+ +Y+ + + +G S +F + + RQ
Sbjct: 163 FLAVYLLSALGGSVGYLLLT-PLYVPGQPLYGV----VGASGAIFGLFGAMLLVQRQRGG 217
Query: 165 VTHQLLNFSVPAVYAPWIELVI---IHLMVPNASFKGHLSGILVG-LC 208
T QL WI + I I +VP +++ HL G++ G LC
Sbjct: 218 DTRQL-----------WILIAINGAIGFLVPQIAWQAHLGGLVTGALC 254
>gi|126651489|ref|ZP_01723693.1| hypothetical protein BB14905_07394 [Bacillus sp. B14905]
gi|126591742|gb|EAZ85838.1| hypothetical protein BB14905_07394 [Bacillus sp. B14905]
Length = 207
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 29 PGTLTLILIQTLLYIMNVLAQP----WDSLGICISAHTILNQRDYKRLVLSALEHGDDMH 84
P TLI I +LY++++L W+ I A+ ++ + ++ R+ + H MH
Sbjct: 16 PVVSTLIAINLILYVLSLLPGVGTLLWN---YGIQANFLVQKGEWWRVFSAIFLHAGFMH 72
Query: 85 LYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIY 131
+++NM SL + G ELE++ G +F+ + + + + M +Y+ Y
Sbjct: 73 VFFNMFSLYLFGPELEKIAGKARFITIY----LVSGIVGNMATYIFY 115
>gi|223992547|ref|XP_002285957.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977272|gb|EED95598.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 338
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
R+ S L D + L + + + G +LE+ GS F VL L ++++V ++++S ++
Sbjct: 69 RIFTSPLVCADILSLIFAFMGFMNHGIKLEQSVGSCMFGVLFFTLTVASNVLFLLVSVLL 128
Query: 131 YLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSP-DVTHQLLNFSVPAVYAPWIELVIIHL 189
+ + + + L ++G +VL ++ + Q+P D +L +VP +Y P LV++ L
Sbjct: 129 WGLTNSESYLVGASMGIWSVLLAIIAVECSQAPPDTKRKLFFLTVPTLYYP---LVLLAL 185
Query: 190 MVPNASFK-GHLSGILVGLCYTETSLGRL---VERS 221
A K + G+ VG Y L RL VER+
Sbjct: 186 FSMFAGVKLAYCLGVAVGYAYGYGKLDRLKVKVERA 221
>gi|110598565|ref|ZP_01386833.1| Rhomboid-like protein [Chlorobium ferrooxidans DSM 13031]
gi|110339799|gb|EAT58306.1| Rhomboid-like protein [Chlorobium ferrooxidans DSM 13031]
Length = 271
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 23 GFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYK--RLVLSALEHG 80
GF IPP +ILI ++++ + P+ + I A + +++ + V HG
Sbjct: 12 GFQFIPPAIKAIILINIAVFLLQM--TPYGEVISSIGALWPIGSGNFRLWQPVTYMFLHG 69
Query: 81 DDMHLYYNMVSLIVKGRELERMFGSVQF 108
HL++NM +L + G E+E +G+ QF
Sbjct: 70 GGTHLFFNMFALWMFGAEIENHWGTRQF 97
>gi|436833411|ref|YP_007318627.1| Rhomboid family protein [Fibrella aestuarina BUZ 2]
gi|384064824|emb|CCG98034.1| Rhomboid family protein [Fibrella aestuarina BUZ 2]
Length = 306
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 82/205 (40%), Gaps = 27/205 (13%)
Query: 42 YIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELER 101
+ ++ L PW + T+L + H D H+ +NMV L GR +E
Sbjct: 51 WTLDQLMMPWQPGALLRKPWTVLTY---------SFTHYDPFHILWNMVFLYWFGRLIEE 101
Query: 102 MFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQ 161
GS + V L + +CY + ++ N+ V Q +G S S+
Sbjct: 102 YLGSRRLVGLYIMGALGGGLCYFVAYNLVPYFNNQVGG--QVLLGASGAALSVAVGAATL 159
Query: 162 SPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFK------GHLSGILVGLCYTETSLG 215
P+ T LL F P V +I L + L N+ H+ G LVG Y
Sbjct: 160 LPNYTFHLL-FIGP-VRIKYIVLFFVVLSFFNSVGNNAGGNLAHIGGALVGFVYI----- 212
Query: 216 RLVERS---GRSVSRVVNTLTNVFK 237
+L++ GR V V++ +N+F+
Sbjct: 213 KLLQNGSDMGRPVYWVMDIWSNLFR 237
>gi|398390255|ref|XP_003848588.1| hypothetical protein MYCGRDRAFT_63728 [Zymoseptoria tritici IPO323]
gi|339468463|gb|EGP83564.1| hypothetical protein MYCGRDRAFT_63728 [Zymoseptoria tritici IPO323]
Length = 270
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 8/148 (5%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS-VQFVVLVSFLIISTSVC 122
+N + +RL L + H + H N+++ + E G+ V F + + +
Sbjct: 49 INLQTLRRLNLFPMLHTNFFHYLLNLIAFVPLVERFESEHGTIVTFALFTGPFGLLPGLL 108
Query: 123 YVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRT-RQSPDVTHQLLNFSVPAVYAPW 181
Y +L + MN V A + +L S + I+T RQ+P ++ + +P P
Sbjct: 109 YTVLERYVLRMNTTVV----GASVWVFLLLSNEAIKTYRQNPHF--EISDVKIPTWTTPL 162
Query: 182 IELVIIHLMVPNASFKGHLSGILVGLCY 209
+V+I ++VP S GHL G LVG +
Sbjct: 163 FLIVVIWVLVPGTSLLGHLCGALVGYLW 190
>gi|384563997|ref|ZP_10011101.1| putative membrane protein [Saccharomonospora glauca K62]
gi|384519851|gb|EIE97046.1| putative membrane protein [Saccharomonospora glauca K62]
Length = 330
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
++ RL+ S H +HL NM++L V GR+LE + G V+F+ + + + +V +L
Sbjct: 155 EWWRLLTSGFLHYGLLHLAMNMLALWVLGRDLEMLLGRVRFLAVYFLSMFAGAVAVFVLG 214
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVII 187
+Y AVL ++ +R + + +LN V +
Sbjct: 215 EPGTATAGASGAIYGL---MGAVLVAVLRLRLNPTTAIAIIVLN-------------VFL 258
Query: 188 HLMVPNASFKGHLSGILVG 206
+ +PN S GHL G++ G
Sbjct: 259 SMSIPNISLLGHLGGLVAG 277
>gi|399526757|ref|ZP_10766509.1| peptidase, S54 family [Actinomyces sp. ICM39]
gi|398362686|gb|EJN46363.1| peptidase, S54 family [Actinomyces sp. ICM39]
Length = 290
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 23/154 (14%)
Query: 75 SALEHGDDMHLYYNMVSLIVKGRELERMFGSVQF--VVLVSFLIISTSVCYVMLSYVIYL 132
A HG +H+ +NM+SL GR +E + G +F V LVS L S +++I
Sbjct: 116 GAFLHGGLLHILFNMLSLYWVGRAIEPVMGWWRFLTVYLVSALGGS--------AFIIAW 167
Query: 133 MNHDVTELYQCAIGFSAVLFSM----KTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIH 188
+E+Y +G SA +F + ++ D T L V VY
Sbjct: 168 CLIQPSEIYVSTVGASAAVFGLFGAVFVLQRLGGSDTTAILTLLGVNLVYG--------- 218
Query: 189 LMVPNASFKGHLSGILVGLCYTETSLGRLVERSG 222
MV S++GH+ G + G+ T + RSG
Sbjct: 219 FMVSGISWQGHIGGAIAGVAATWVLVRMARPRSG 252
>gi|116331862|ref|YP_801580.1| intramembrane protease [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116125551|gb|ABJ76822.1| Intramembrane protease [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 197
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 52 DSLG-ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVV 110
D LG ++ + + ++Y L+ S H D MHL +NM+S G+ LE G V+F++
Sbjct: 22 DKLGKFVLTPYRLKRNKNYYTLITSGFIHADWMHLIFNMISFYSFGKNLETTVGPVKFLL 81
Query: 111 LVSFLIISTSV 121
I+ TSV
Sbjct: 82 FYLGTILITSV 92
>gi|296123510|ref|YP_003631288.1| rhomboid family protein [Planctomyces limnophilus DSM 3776]
gi|296015850|gb|ADG69089.1| Rhomboid family protein [Planctomyces limnophilus DSM 3776]
Length = 430
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 34/186 (18%)
Query: 37 IQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKG 96
I TL + V Q W ++ + L + ++ RL+++ HGD +HL N++ L G
Sbjct: 61 ISTLSFFREVEPQIWKNVTPELYGPFELWKGEWWRLLVTGFHHGDPVHLTLNLMVLAFLG 120
Query: 97 RELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY--QCAIGFSAVLFSM 154
+E+ G + F + F II SVC EL+ + +G S LF++
Sbjct: 121 PLVEQRLGKISFSLFFVFSII-FSVC---------------AELFWGENVVGISGGLFAL 164
Query: 155 ------KTIR----TRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGIL 204
+R RQ PD + + AV A L I+ N H+SG+L
Sbjct: 165 LGYLVIARLRDEELARQLPD-ERWIFYLLMAAVMAGLSALEIL-----NIGNTAHVSGLL 218
Query: 205 VGLCYT 210
VG+ +
Sbjct: 219 VGVAWA 224
>gi|157273306|gb|ABV27205.1| integral membrane protein Rhomboid family protein [Candidatus
Chloracidobacterium thermophilum]
Length = 386
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 21/189 (11%)
Query: 29 PGTLTLILIQTLLYIMNVLA------QPWDSLGICISAHTILNQRDYKRLVLSALEHGDD 82
P + LI I +++++ A + + G C ++ Q + RLV+ H
Sbjct: 33 PLSYVLIGINVVMFLLTAFAGGSTDPEVLTAFGAC--NRKLIAQGELWRLVVPMFLHIGV 90
Query: 83 MHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQ 142
+HL NM +L V G +LE ++GS +F +L I V ++ + L+
Sbjct: 91 IHLVANMYALWVVGPQLESLYGSARFTILYVLSGIGGFVASYFFAHPESIGAGASGALFG 150
Query: 143 CAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIEL---VIIHLMVPNASFKGH 199
F A+L + R+ + P + + V W+ L +II +P S GH
Sbjct: 151 M---FGALLVFVYKYRS-EIPPLVRATMRRGV------WLTLALNLIITFSIPFISRSGH 200
Query: 200 LSGILVGLC 208
+ G+L G+C
Sbjct: 201 VGGLLTGIC 209
>gi|323331116|gb|EGA72534.1| Rbd2p [Saccharomyces cerevisiae AWRI796]
Length = 176
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 144 AIGFSAVLFSMKTIRTRQ-SPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSG 202
A G+ LF+ + + Q P ++S+P +Y P + LV I +++P +SF GH G
Sbjct: 37 ASGWCFTLFAYYSFKESQIRPRTRIFRTDYSIPTLYTPLVLLVAIAVVIPGSSFWGHFFG 96
Query: 203 ILVG--LCYTETSLGRLVERSGRSVSRVVNTLTNVFKL 238
+ VG + Y E+ ++ G ++++ +L + +L
Sbjct: 97 LCVGYAIGYKESWFNKITP-PGWIITKIEKSLDGLIRL 133
>gi|421879273|ref|ZP_16310744.1| Membrane-associated serine protease [Leuconostoc citreum LBAE C11]
gi|390446828|emb|CCF26864.1| Membrane-associated serine protease [Leuconostoc citreum LBAE C11]
Length = 229
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 25/167 (14%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
I + + Y RL+ H MH+ NM++L G E FGS +F++L +F I ++
Sbjct: 54 IAHNQAYWRLLTPVFLHAGIMHIVTNMLTLWFVGPIAEHAFGSWRFLMLYAFGGIVGNIF 113
Query: 123 YVMLSYVIYLMNHDVTELYQCAIGFSAVLFSM------KTIRTRQSPDVTHQLLNFSVPA 176
+LS + ++G S+ LF+M +R R +P + Q F +
Sbjct: 114 SYLLSPL------------AISVGASSALFAMFAGLILYGVRYRDNPTIRAQGATFLLFV 161
Query: 177 VYAPWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGR 223
V + L+ P GH+ G++ G+ T LG V +SG+
Sbjct: 162 VLN-----LFSGLLAPTIDLWGHIGGLIGGMMST-VMLG-FVGKSGQ 201
>gi|15839491|ref|NP_334528.1| rhomboid family protein [Mycobacterium tuberculosis CDC1551]
gi|148821302|ref|YP_001286056.1| integral membrane protein [Mycobacterium tuberculosis F11]
gi|253797028|ref|YP_003030029.1| hypothetical protein TBMG_00111 [Mycobacterium tuberculosis KZN
1435]
gi|254233504|ref|ZP_04926830.1| hypothetical protein TBCG_00110 [Mycobacterium tuberculosis C]
gi|289445640|ref|ZP_06435384.1| rhomboid family protein [Mycobacterium tuberculosis CPHL_A]
gi|289747877|ref|ZP_06507255.1| rhomboid family protein [Mycobacterium tuberculosis 02_1987]
gi|308378549|ref|ZP_07482957.2| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
gi|308394636|ref|ZP_07491694.2| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|375294312|ref|YP_005098579.1| hypothetical protein TBSG_00111 [Mycobacterium tuberculosis KZN
4207]
gi|392430521|ref|YP_006471565.1| hypothetical protein TBXG_000111 [Mycobacterium tuberculosis KZN
605]
gi|422815296|ref|ZP_16863514.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
gi|13879598|gb|AAK44342.1| Rhomboid family protein [Mycobacterium tuberculosis CDC1551]
gi|124603297|gb|EAY61572.1| hypothetical protein TBCG_00110 [Mycobacterium tuberculosis C]
gi|148719829|gb|ABR04454.1| conserved integral membrane protein [Mycobacterium tuberculosis
F11]
gi|253318531|gb|ACT23134.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435]
gi|289418598|gb|EFD15799.1| rhomboid family protein [Mycobacterium tuberculosis CPHL_A]
gi|289688405|gb|EFD55893.1| rhomboid family protein [Mycobacterium tuberculosis 02_1987]
gi|308197784|gb|ADO17908.1| rhomboid protease 1 [Mycobacterium tuberculosis H37Rv]
gi|308197788|gb|ADO17910.1| rhomboid protease 1 [Mycobacterium tuberculosis]
gi|308197792|gb|ADO17912.1| rhomboid protease 1 [Mycobacterium bovis BCG]
gi|308197796|gb|ADO17914.1| rhomboid protease 1 [Mycobacterium bovis]
gi|308352202|gb|EFP41053.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
gi|308367674|gb|EFP56525.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|323717250|gb|EGB26458.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
gi|328456817|gb|AEB02240.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207]
gi|392051930|gb|AFM47488.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
Length = 284
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 26/180 (14%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMV 90
T TLI + L+++M V + + + + + + Y RLV SA H MHL NM
Sbjct: 75 TYTLISLNALVFVMQVTVMGLERQ-LALWPPAVASGQTY-RLVTSAFLHYGAMHLLLNMW 132
Query: 91 SLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAV 150
+L V G LE G ++F L + + SV L Y+I +N G
Sbjct: 133 ALYVVGPPLEMWLGRLRFGALYAVSALGGSV----LVYLIAPLNTATAGASGAVFG---- 184
Query: 151 LFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHL----MVPNASFKGHLSGILVG 206
LF + R+ L+ V V + L++I+L + P S++GH+ G++ G
Sbjct: 185 LFGATFMVARR--------LHLDVRWV----VALIVINLAFTFLAPAISWQGHVGGLVTG 232
>gi|320168465|gb|EFW45364.1| hypothetical protein CAOG_03370 [Capsaspora owczarzaki ATCC 30864]
Length = 451
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 6/158 (3%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNM-----VSLIVKGR-ELERMFGSVQFV 109
+ S + ++ R++ + H +HL NM S + R LE M + +
Sbjct: 110 VTFSYAAVYERQQLSRIITAPFFHASLVHLLMNMSAVWTCSFFEEERGTLEYMRATALLI 169
Query: 110 VLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQL 169
L +F+ ++ + C V+ + L+ + ++G+S V F + T+ P
Sbjct: 170 GLSAFVHLALTHCLVLHANWRGLVERRDSYRTCLSVGYSGVAFGLATLLGLAHPMYPVPF 229
Query: 170 LNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGL 207
L + PA AP L++ +V AS H+SGI+ G+
Sbjct: 230 LFANFPAWSAPLFNLILTQFLVRRASLLAHVSGIIAGV 267
>gi|332663565|ref|YP_004446353.1| rhomboid family protein [Haliscomenobacter hydrossis DSM 1100]
gi|332332379|gb|AEE49480.1| Rhomboid family protein [Haliscomenobacter hydrossis DSM 1100]
Length = 281
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 22/161 (13%)
Query: 62 TILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSV 121
+IL +D+KRLV SA H + MHL +NM+SL LE G + FV+L +++ V
Sbjct: 38 SILFHKDFKRLVSSAFLHVNWMHLIFNMLSLYAFSNLLENQLGGLNFVLLY----LTSLV 93
Query: 122 CYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPW 181
+L+ ++ + + A+G S + + P + ++ F +P + W
Sbjct: 94 GGNLLALFVHRQHGSYS-----AVGASGAVCGVIFASIALFPGI--EVGTFFLPFQFPGW 146
Query: 182 --------IELVIIHLMVPNASFKGHLSGILVGL---CYTE 211
I + I N + HL G L+G+ CY +
Sbjct: 147 LFGLLYVAISIYGIKSKRGNIGHEAHLGGALIGVLLACYMQ 187
>gi|229818522|ref|YP_002880048.1| rhomboid family protein [Beutenbergia cavernae DSM 12333]
gi|229564435|gb|ACQ78286.1| Rhomboid family protein [Beutenbergia cavernae DSM 12333]
Length = 315
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 31 TLTLILIQTLLYIMNVLAQP-WDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNM 89
TLT+I+I + ++ +A + + ++ + + R + +A HG +HL +NM
Sbjct: 109 TLTIIVICAAIELLRYVAPGLYSEVYQAMAFSAAIGEVQPYRFLSAAFLHGGLLHLAFNM 168
Query: 90 VSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI-YLMNHDVTELYQCAIG-F 147
+L + G LE+M G ++ L I SV Y++L+ + V G F
Sbjct: 169 YALWIVGGFLEQMLGRWRYAALFLLSAIGGSVGYLLLADPLSRAWTIPVVGASGAVFGLF 228
Query: 148 SAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
+A++F +++ S + +N V+I +VP +++ HL G++ G
Sbjct: 229 AAIVFVLRSTGRNASQILVLIAIN-------------VVIGFVVPGIAWQAHLGGMVTG 274
>gi|148271189|ref|YP_001220750.1| hypothetical protein CMM_0011 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147829119|emb|CAN00017.1| conserved membrane protein [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 287
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 22/142 (15%)
Query: 71 RLVLSALEHGDD--MHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
R++ SA H D +H+ +NM+S+ V GR LE M G +F+ L FLI + S
Sbjct: 121 RMLTSAFTHSPDSILHIVFNMLSVFVFGRVLEPMLGRARFLAL--FLISALGG-----SL 173
Query: 129 VIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIH 188
+ ++ + E Q +G S +F + + +L + P + ++ I+
Sbjct: 174 AVEVIGSAMGEPLQAVVGASGAIFGLMG---------GYFVLARKLGGNVGPLLGIIAIN 224
Query: 189 LM----VPNASFKGHLSGILVG 206
L+ V S++ H+ G++ G
Sbjct: 225 LLLGFVVQGVSWQAHVGGLVTG 246
>gi|47226467|emb|CAG08483.1| unnamed protein product [Tetraodon nigroviridis]
Length = 349
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 71/142 (50%), Gaps = 13/142 (9%)
Query: 68 DYKRL---VLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYV 124
D+ R+ +L A+ H + L ++++ L+ GR ER +G+V F+ L + + Y
Sbjct: 49 DFPRVSDVLLYAISHDELPALLFSVILLVSVGRFQERRWGTVPFLALSALTVTILPFLYT 108
Query: 125 MLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIEL 184
+L +++ + + T + G SA+ ++ T + RQ T + L +PA + PW+ L
Sbjct: 109 LL---LFVGSGEATRI----CGHSAIQLTLFTAQCRQE---TPRRLPRCLPAWFLPWLLL 158
Query: 185 VIIHLMVPNASFKGHLSGILVG 206
++ L++P H + +G
Sbjct: 159 LMAVLLLPGTPVLLHFCSLFIG 180
>gi|375092943|ref|ZP_09739208.1| putative membrane protein [Saccharomonospora marina XMU15]
gi|374653676|gb|EHR48509.1| putative membrane protein [Saccharomonospora marina XMU15]
Length = 309
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 22/142 (15%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQF--VVLVSFLIISTSVCYVM 125
++ RLV S H +H+ NM++L + GR+LE + G V+F V VS L S +V
Sbjct: 140 EWWRLVTSGFLHFGLLHIGMNMLALWILGRDLELLLGKVRFLAVYFVSMLGGSAAV---- 195
Query: 126 LSYVIYLMNHDVTELYQCAIGF-SAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIEL 184
+ +N G A+L ++ +R + + +LN
Sbjct: 196 --FAFGAVNTGTAGASGAIYGLMGAILVAVLRLRLNPTAAIGIIVLN------------- 240
Query: 185 VIIHLMVPNASFKGHLSGILVG 206
V++ + +P S GHL G++VG
Sbjct: 241 VVLTISIPGISLLGHLGGLVVG 262
>gi|254549044|ref|ZP_05139491.1| putative integral membrane protein [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length = 247
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 26/189 (13%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYY 87
P T TLI + L+++M V + + + + + + Y RLV SA H MHL
Sbjct: 35 PVVTYTLISLNALVFVMQVTVMGLERQ-LALWPPAVASGQTY-RLVTSAFLHYGAMHLLL 92
Query: 88 NMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGF 147
NM +L V G LE G ++F L + + SV L Y+I +N G
Sbjct: 93 NMWALYVVGPPLEMWLGRLRFGALYAVSALGGSV----LVYLIAPLNTATAGASGAVFG- 147
Query: 148 SAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHL----MVPNASFKGHLSGI 203
LF + R+ L+ V V + L++I+L + P S++GH+ G+
Sbjct: 148 ---LFGATFMVARR--------LHLDVRWV----VALIVINLAFTFLAPAISWQGHVGGL 192
Query: 204 LVGLCYTET 212
+ G T
Sbjct: 193 VTGALVAAT 201
>gi|300797244|ref|NP_001178756.1| rhomboid domain-containing protein 2 [Rattus norvegicus]
Length = 361
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 15/172 (8%)
Query: 46 VLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
+L P G+ + + + N + Y RLV + + + L + + ER G+
Sbjct: 38 LLQPPLAPSGLSLRSEALRNWQVY-RLVTYIFVYENPISLLCGAIIIWRFAGNFERSVGT 96
Query: 106 VQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-----AIGFSAVLFSMKTIRTR 160
V+ F +I + + S +IYL V+ L + A GF+ V F+M + +
Sbjct: 97 VRHCF---FTLI-----FTVFSAIIYLSFESVSSLSKLGEVEDARGFTPVAFAMLGVTSV 148
Query: 161 QSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYTET 212
+S + VP+V PW+ L+ ++P SF ++SG+L+GL Y T
Sbjct: 149 RSRMRRALVFGVVVPSVLVPWL-LLCASWLIPQTSFLSNVSGLLIGLSYGLT 199
>gi|22122463|ref|NP_666114.1| rhomboid domain-containing protein 2 [Mus musculus]
gi|81879423|sp|Q8VEK2.1|RHBD2_MOUSE RecName: Full=Rhomboid domain-containing protein 2; AltName:
Full=Rhomboid-like protein 7
gi|17390840|gb|AAH18360.1| Rhomboid domain containing 2 [Mus musculus]
gi|26334761|dbj|BAC31081.1| unnamed protein product [Mus musculus]
gi|74139145|dbj|BAE38463.1| unnamed protein product [Mus musculus]
Length = 361
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 15/169 (8%)
Query: 46 VLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
+L P G+ + + + N + Y RLV + + + L + + ER G+
Sbjct: 38 LLQPPLAPSGLSLRSEALRNWQVY-RLVTYIFVYENPVSLLCGAIIIWRFAGNFERTVGT 96
Query: 106 VQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-----AIGFSAVLFSMKTIRTR 160
V+ F +I + + S +IYL V+ L + A GF+ V F+M + +
Sbjct: 97 VRHCF---FTLI-----FTVFSAIIYLSFESVSSLSKLGEVEDARGFTPVAFAMLGVTSV 148
Query: 161 QSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
+S + VP+V PW+ L+ ++P SF ++SG+L+GL Y
Sbjct: 149 RSRMRRALVFGVVVPSVLVPWL-LLCASWLIPQTSFLSNVSGLLIGLSY 196
>gi|398335808|ref|ZP_10520513.1| intramembrane protease [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
Length = 199
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 58 ISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLII 117
++ + + ++Y L+ S H D MHL +NMVS GR LE G ++FV+ I+
Sbjct: 29 LTPYRLERNKNYYTLLTSGFIHADWMHLIFNMVSFYSFGRNLEITVGPIKFVLFYLGTIL 88
Query: 118 STSV 121
TSV
Sbjct: 89 ITSV 92
>gi|223935890|ref|ZP_03627805.1| Rhomboid family protein [bacterium Ellin514]
gi|223895491|gb|EEF61937.1| Rhomboid family protein [bacterium Ellin514]
Length = 282
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 20/175 (11%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
IL ++ Y RLV SA H + HL++NM L GR +E + G + F+ + II +
Sbjct: 40 ILAEKQYHRLVTSAFLHANWRHLFFNMFGLYAFGRLIESIHGPLMFLSIYFAGIIGGDLL 99
Query: 123 YVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWI 182
+ L NH+ Y + G ++F+ I V+ + S+P W+
Sbjct: 100 ALWLH-----RNHEY-RAYGASGGVCGIVFA--AIFLFPGIGVSMMFIPISIPG----WL 147
Query: 183 ELVIIHLMVPNASFKG--------HLSGILVGLCYTETSLGRLVERSGRSVSRVV 229
+VI + + KG HL G ++ L +V+ S + + V+
Sbjct: 148 YVVIFLTSEFHGTIKGKDNVGHDAHLGGAIISLATATAFKPEIVQWSPKLYAAVM 202
>gi|15607252|ref|NP_214624.1| Probable conserved integral membrane protein [Mycobacterium
tuberculosis H37Rv]
gi|31791288|ref|NP_853781.1| hypothetical protein Mb0114 [Mycobacterium bovis AF2122/97]
gi|121636023|ref|YP_976246.1| integral membrane protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148659873|ref|YP_001281396.1| rhomboid family protein [Mycobacterium tuberculosis H37Ra]
gi|167967299|ref|ZP_02549576.1| conserved integral membrane protein [Mycobacterium tuberculosis
H37Ra]
gi|224988496|ref|YP_002643183.1| integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|254366565|ref|ZP_04982609.1| conserved integral membrane protein [Mycobacterium tuberculosis
str. Haarlem]
gi|289441479|ref|ZP_06431223.1| conserved membrane protein [Mycobacterium tuberculosis T46]
gi|289568003|ref|ZP_06448230.1| conserved membrane protein [Mycobacterium tuberculosis T17]
gi|289572690|ref|ZP_06452917.1| rhomboid family protein [Mycobacterium tuberculosis K85]
gi|289748582|ref|ZP_06507960.1| conserved membrane protein [Mycobacterium tuberculosis T92]
gi|289756172|ref|ZP_06515550.1| rhomboid family protein [Mycobacterium tuberculosis EAS054]
gi|289760210|ref|ZP_06519588.1| rhomboid family protein [Mycobacterium tuberculosis T85]
gi|289764227|ref|ZP_06523605.1| rhomboid family protein [Mycobacterium tuberculosis GM 1503]
gi|294992953|ref|ZP_06798644.1| putative integral membrane protein [Mycobacterium tuberculosis 210]
gi|297632583|ref|ZP_06950363.1| putative integral membrane protein [Mycobacterium tuberculosis KZN
4207]
gi|297729557|ref|ZP_06958675.1| putative integral membrane protein [Mycobacterium tuberculosis KZN
R506]
gi|298527502|ref|ZP_07014911.1| rhomboid family serine protease [Mycobacterium tuberculosis
94_M4241A]
gi|306774194|ref|ZP_07412531.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
gi|306778939|ref|ZP_07417276.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
gi|306782726|ref|ZP_07421048.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
gi|306787094|ref|ZP_07425416.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
gi|306791651|ref|ZP_07429953.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
gi|306798472|ref|ZP_07436774.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
gi|306801688|ref|ZP_07438356.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
gi|306805900|ref|ZP_07442568.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
gi|306974529|ref|ZP_07487190.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
gi|307082237|ref|ZP_07491407.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
gi|313656884|ref|ZP_07813764.1| putative integral membrane protein [Mycobacterium tuberculosis KZN
V2475]
gi|339630194|ref|YP_004721836.1| hypothetical protein MAF_01110 [Mycobacterium africanum GM041182]
gi|340625145|ref|YP_004743597.1| putative integral membrane protein [Mycobacterium canettii CIPT
140010059]
gi|378769856|ref|YP_005169589.1| hypothetical protein BCGMEX_0114 [Mycobacterium bovis BCG str.
Mexico]
gi|385996882|ref|YP_005915180.1| integral membrane protein [Mycobacterium tuberculosis CTRI-2]
gi|386003192|ref|YP_005921471.1| hypothetical protein MRGA423_00715 [Mycobacterium tuberculosis
RGTB423]
gi|392384830|ref|YP_005306459.1| unnamed protein product [Mycobacterium tuberculosis UT205]
gi|397671894|ref|YP_006513428.1| hypothetical protein RVBD_0110 [Mycobacterium tuberculosis H37Rv]
gi|424806593|ref|ZP_18232024.1| conserved membrane protein [Mycobacterium tuberculosis W-148]
gi|433625211|ref|YP_007258840.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140060008]
gi|31616873|emb|CAD92975.1| PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN [Mycobacterium bovis
AF2122/97]
gi|121491670|emb|CAL70128.1| Probable conserved integral membrane protein [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|134152077|gb|EBA44122.1| conserved integral membrane protein [Mycobacterium tuberculosis
str. Haarlem]
gi|148504025|gb|ABQ71834.1| Rhomboid family protein [Mycobacterium tuberculosis H37Ra]
gi|224771609|dbj|BAH24415.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|289414398|gb|EFD11638.1| conserved membrane protein [Mycobacterium tuberculosis T46]
gi|289537121|gb|EFD41699.1| rhomboid family protein [Mycobacterium tuberculosis K85]
gi|289541756|gb|EFD45405.1| conserved membrane protein [Mycobacterium tuberculosis T17]
gi|289689169|gb|EFD56598.1| conserved membrane protein [Mycobacterium tuberculosis T92]
gi|289696759|gb|EFD64188.1| rhomboid family protein [Mycobacterium tuberculosis EAS054]
gi|289711733|gb|EFD75749.1| rhomboid family protein [Mycobacterium tuberculosis GM 1503]
gi|289715774|gb|EFD79786.1| rhomboid family protein [Mycobacterium tuberculosis T85]
gi|298497296|gb|EFI32590.1| rhomboid family serine protease [Mycobacterium tuberculosis
94_M4241A]
gi|308217202|gb|EFO76601.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
gi|308328061|gb|EFP16912.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
gi|308332433|gb|EFP21284.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
gi|308336197|gb|EFP25048.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
gi|308339800|gb|EFP28651.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
gi|308341295|gb|EFP30146.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
gi|308347577|gb|EFP36428.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
gi|308351519|gb|EFP40370.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
gi|308356167|gb|EFP45018.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
gi|308360107|gb|EFP48958.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
gi|326905869|gb|EGE52802.1| conserved membrane protein [Mycobacterium tuberculosis W-148]
gi|339329550|emb|CCC25185.1| putative conserved integral membrane protein [Mycobacterium
africanum GM041182]
gi|340003335|emb|CCC42454.1| putative conserved integral membrane protein [Mycobacterium
canettii CIPT 140010059]
gi|341600039|emb|CCC62707.1| probable conserved integral membrane protein [Mycobacterium bovis
BCG str. Moreau RDJ]
gi|344217928|gb|AEM98558.1| integral membrane protein [Mycobacterium tuberculosis CTRI-2]
gi|356592177|gb|AET17406.1| Conserved integral membrane protein [Mycobacterium bovis BCG str.
Mexico]
gi|378543381|emb|CCE35652.1| unnamed protein product [Mycobacterium tuberculosis UT205]
gi|380723680|gb|AFE11475.1| putative integral membrane protein [Mycobacterium tuberculosis
RGTB423]
gi|395136798|gb|AFN47957.1| hypothetical protein RVBD_0110 [Mycobacterium tuberculosis H37Rv]
gi|432152817|emb|CCK50026.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140060008]
gi|440579558|emb|CCG09961.1| putative CONSERVED INTEGRAL membrane protein [Mycobacterium
tuberculosis 7199-99]
gi|444893582|emb|CCP42835.1| Probable conserved integral membrane protein [Mycobacterium
tuberculosis H37Rv]
Length = 249
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 26/189 (13%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYY 87
P T TLI + L+++M V + + + + + + Y RLV SA H MHL
Sbjct: 37 PVVTYTLISLNALVFVMQVTVMGLERQ-LALWPPAVASGQTY-RLVTSAFLHYGAMHLLL 94
Query: 88 NMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGF 147
NM +L V G LE G ++F L + + SV L Y+I +N G
Sbjct: 95 NMWALYVVGPPLEMWLGRLRFGALYAVSALGGSV----LVYLIAPLNTATAGASGAVFG- 149
Query: 148 SAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHL----MVPNASFKGHLSGI 203
LF + R+ L+ V V + L++I+L + P S++GH+ G+
Sbjct: 150 ---LFGATFMVARR--------LHLDVRWV----VALIVINLAFTFLAPAISWQGHVGGL 194
Query: 204 LVGLCYTET 212
+ G T
Sbjct: 195 VTGALVAAT 203
>gi|296417707|ref|XP_002838494.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634433|emb|CAZ82685.1| unnamed protein product [Tuber melanosporum]
Length = 179
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 141 YQCAIGFSAVLFSM---KTIRT-RQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASF 196
Y G SA++F++ + ++T + P T+ + + +P+ AP LV++ ++VP AS
Sbjct: 25 YDSVAGASALVFTLMANEAVKTFLEKP--TYSIAGYGIPSWMAPIFWLVVVSILVPGASI 82
Query: 197 KGHLSGILVGLCYTETSLGRLVERSGRSVSRVVNTL 232
GH G+++G Y L RL+E S + +V + L
Sbjct: 83 LGHFCGLIIGYLYACHYL-RLLEPSENILGKVESKL 117
>gi|410620726|ref|ZP_11331584.1| GlpG protein [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410159609|dbj|GAC26958.1| GlpG protein [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 322
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 59 SAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIIS 118
S +L + + RL A H +H+ +N++ + G +LER FGSV V+ + IS
Sbjct: 168 SIDELLQSQQWWRLFTPAFLHFGAIHIIFNLIWWWLLGSQLERAFGSVSLAVIFAIAAIS 227
Query: 119 TSVCYVMLS 127
++V +++S
Sbjct: 228 SNVAQLLVS 236
>gi|159040476|ref|YP_001539729.1| rhomboid family protein [Salinispora arenicola CNS-205]
gi|157919311|gb|ABW00739.1| Rhomboid family protein [Salinispora arenicola CNS-205]
Length = 303
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 22/165 (13%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCY 123
+ + ++ RL+ + H +HL NM +L + GR LE G +F+ L +LI + +
Sbjct: 134 IAEGEWYRLITAMFLHYGVIHLLLNMYALWILGRNLEASLGPARFLAL--YLI--SGLGG 189
Query: 124 VMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIE 183
+ +Y+I N G A LF + R DV+ Q+L V I
Sbjct: 190 NVAAYLISAPNAATAGASTAIFGLFAALF---VVGRRLGRDVS-QVLPILV-------IN 238
Query: 184 LVIIHLMVPNASFKGHLSGILVG------LCYTETSLGRLVERSG 222
LV L VP S GHL G+++G L Y S LV+ +G
Sbjct: 239 LVFT-LTVPGISIPGHLGGLVLGALMAVILAYAPRSRRTLVQVAG 282
>gi|336121537|ref|YP_004576312.1| Rhomboid family protein [Methanothermococcus okinawensis IH1]
gi|334856058|gb|AEH06534.1| Rhomboid family protein [Methanothermococcus okinawensis IH1]
Length = 191
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 22/158 (13%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
+ + S HG HL+ NM L G LE+ G F+ + I+ ++ Y++ SY
Sbjct: 41 QFITSIFIHGSFTHLFLNMFVLFFFGLRLEKWIGGANFLKIFFISGIAGNIAYLLYSY-- 98
Query: 131 YLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP-------AVYAPWIE 183
T Y A+G S + + T P++ + F +P ++A +
Sbjct: 99 ------STNQYIPAVGASGAISGIIGALTILDPNMEIMIFPFPIPIKLKYATILFAGFEI 152
Query: 184 LVIIHLMVPNASFKGHLSGILVG-LCYTETSLGRLVER 220
L +I ++P HL G+ G LC G+L+ +
Sbjct: 153 LCLIFSIMPTIGHAAHLGGLFTGMLC------GKLLNK 184
>gi|400293315|ref|ZP_10795191.1| peptidase, S54 family [Actinomyces naeslundii str. Howell 279]
gi|399901556|gb|EJN84435.1| peptidase, S54 family [Actinomyces naeslundii str. Howell 279]
Length = 285
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 25/143 (17%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQF--VVLVSFLIISTSVCYVMLSY 128
R + +A H + MHL +NM +L V G LE + G +F V L+S L ST+
Sbjct: 120 RFLTTAFLHANYMHLGFNMWALWVLGGALEPVLGRWRFTAVYLLSALGGSTA-------- 171
Query: 129 VIYLMNHDVTELYQC-AIGFSAVLF----SMKTIRTRQSPDVTHQLLNFSVPAVYAPWIE 183
IY ++ TE + +G S +F +M ++ R D + + + V
Sbjct: 172 -IYWLSWPETEAWTTLTVGASGAVFGLFSTMFVVQRRFGRDTSGIVALLVINGV------ 224
Query: 184 LVIIHLMVPNASFKGHLSGILVG 206
+ + N S++GHL G++VG
Sbjct: 225 ---VSFLGANISWQGHLGGLIVG 244
>gi|335430608|ref|ZP_08557497.1| rhomboid family protein [Haloplasma contractile SSD-17B]
gi|335431252|ref|ZP_08558135.1| rhomboid family protein [Haloplasma contractile SSD-17B]
gi|334886957|gb|EGM25302.1| rhomboid family protein [Haloplasma contractile SSD-17B]
gi|334887825|gb|EGM26144.1| rhomboid family protein [Haloplasma contractile SSD-17B]
Length = 214
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 20/155 (12%)
Query: 57 CISAHTILNQRDYKRLVLSALEHGDDMHLYYNMV-SLIVKGRELERMFGSVQFVVLVSFL 115
I +TI + R + + HG+ +H+ +NM LI+ G LE + GS +F + V FL
Sbjct: 57 AIQTYTIDATGQFYRFLTAMFLHGNFLHILFNMFFGLIILGAALEGLIGSTRFFI-VYFL 115
Query: 116 IISTSVCYVMLSYVIYLMN--HDVTELYQCAI-GFSAVLFSMKTIRTRQSPDVTHQLLNF 172
S SY +YL++ + VT AI G VL M + P +L+
Sbjct: 116 TGIAS------SYGVYLLSGPYTVTVGASGAIYGILGVLLFMIVFKKTLVPYNDRKLI-- 167
Query: 173 SVPAVYAPWIEL-VIIHLMVPNASFKGHLSGILVG 206
A I L VI+ ++ S +GHLSG++ G
Sbjct: 168 ------AQLIILNVILSFVLSGISLEGHLSGLIAG 196
>gi|389805798|ref|ZP_10202945.1| hypothetical protein UUA_01125 [Rhodanobacter thiooxydans LCS2]
gi|388447039|gb|EIM03053.1| hypothetical protein UUA_01125 [Rhodanobacter thiooxydans LCS2]
Length = 202
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 62 TILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
I QR+Y RLV L H D HL +NM++L GR +E F S
Sbjct: 34 AIARQREYHRLVTYGLVHADFGHLLFNMITLFFFGRVMESFFAS 77
>gi|323135989|ref|ZP_08071072.1| Rhomboid family protein [Methylocystis sp. ATCC 49242]
gi|322399080|gb|EFY01599.1| Rhomboid family protein [Methylocystis sp. ATCC 49242]
Length = 537
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 19/202 (9%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLGICIS-----AHTILNQRDYKRLVLSALEHGD 81
+P T L+ + L+++ + +LG ++ A +L Q + RL+ SA H
Sbjct: 343 LPRVTFALVAVNALVFVAEIALGGSQNLGTLVALGALWAPLVLQQGEDWRLLTSAFLHFG 402
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
MH NM+ L + GR++E G+++ + L + +S ++V+ LM Y
Sbjct: 403 GMHFALNMLMLALIGRDVEHEIGAIRTLALYLGGALFSS------AFVLGLMAFGSVA-Y 455
Query: 142 QCAIGFSAVLFSM----KTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFK 197
+G S +F++ +R R L F A+ + + ++P +S
Sbjct: 456 GLYVGASGAIFALFGVVGALRVRDWLRHRASLDTFRTAALALAILVQIGADFLLPMSSLA 515
Query: 198 GHLSGILVGLC---YTETSLGR 216
HLSG GL + + GR
Sbjct: 516 AHLSGFGFGLVAGFFVKPGRGR 537
>gi|433629203|ref|YP_007262831.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140070010]
gi|432160796|emb|CCK58126.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140070010]
Length = 249
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 26/183 (14%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYY 87
P T TLI + L+++M V + + + + + + Y RLV SA H MHL
Sbjct: 37 PVVTYTLISLNALVFVMQVTVMGLERQ-LALWPPAVASGQTY-RLVTSAFLHYGAMHLLL 94
Query: 88 NMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGF 147
NM +L V G LE G ++F L + + SV L Y+I +N G
Sbjct: 95 NMWALYVVGPPLEMWLGRLRFGALYAVSALGGSV----LVYLIAPLNTATAGASGAVFG- 149
Query: 148 SAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHL----MVPNASFKGHLSGI 203
LF + R+ L+ V V + L++I+L + P S++GH+ G+
Sbjct: 150 ---LFGATFMVARR--------LHLDVRWV----VALIVINLAFTFLAPAISWQGHVGGL 194
Query: 204 LVG 206
+ G
Sbjct: 195 VTG 197
>gi|270307582|ref|YP_003329640.1| rhomboid [Dehalococcoides sp. VS]
gi|270153474|gb|ACZ61312.1| rhomboid [Dehalococcoides sp. VS]
Length = 190
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 15/138 (10%)
Query: 72 LVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIY 131
++ S H D HL+ NM++L G L +M ++++ ++ S+ +++L+
Sbjct: 51 IITSLFVHADLWHLFANMITLYFFGNALLQMINQRSWLIIFFGGGLAGSLLFILLN---- 106
Query: 132 LMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELV---IIH 188
+ IG S +F++ P+ +++ F +P WI ++ II
Sbjct: 107 ------AGSFGYVIGASGAVFALGGTLAVLRPN--SKVMVFPLPVPIPLWIAVIGSFIIL 158
Query: 189 LMVPNASFKGHLSGILVG 206
+P+ +++GHL G+LVG
Sbjct: 159 SFLPSVAWQGHLGGLLVG 176
>gi|124003019|ref|ZP_01687870.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
gi|123991669|gb|EAY31077.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
Length = 219
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 19/181 (10%)
Query: 59 SAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERM-------FGSVQFVVL 111
+ + I ++++Y R + S HG HL +NM++L R++E + +GS+ FVV+
Sbjct: 41 NPYIIESRKEYYRFLSSGFIHGGSTHLLFNMLTLFFFARQVELIYGAVFPGYGSIMFVVI 100
Query: 112 VSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN 171
II S+ +YV + N L + G S ++F +I + ++ LL
Sbjct: 101 YLAGIIIASIP----AYVKHRGNPAYNAL-GASGGVSTIVFV--SILCLPTSNIGFLLLP 153
Query: 172 F-SVPAVYAPWIELVIIHLMVPNAS----FKGHLSGILVGLCYTETSLGRLVERSGRSVS 226
F S PA + L+ + M N++ + HL G L G+ T + +V R +++
Sbjct: 154 FVSFPAFFLGIAYLLYSYYMAKNSNDNIGHEAHLFGALFGIATTIAFVPGVVPRFFEAIA 213
Query: 227 R 227
Sbjct: 214 N 214
>gi|404425001|ref|ZP_11006516.1| rhomboid family protein [Mycobacterium fortuitum subsp. fortuitum
DSM 46621]
gi|403649659|gb|EJZ05001.1| rhomboid family protein [Mycobacterium fortuitum subsp. fortuitum
DSM 46621]
Length = 240
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 21/181 (11%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMV 90
T +LI + L++++ + + + + + A I Y RLV SA H MHL +NM
Sbjct: 30 TYSLIAVNVLMFVLQMASGDRLTEELTLWAPGIAFYDQYYRLVTSAFLHYGVMHLLFNMW 89
Query: 91 SLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAV 150
+L V G LE+ G +++ L + + SV L Y++ +N G
Sbjct: 90 ALYVVGPPLEQWLGRLRYGALYALSALGGSV----LVYLLTPINTPTAGASGAIFGLFGA 145
Query: 151 LFSMKT-----IRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILV 205
+F + +R + + + + F+ PA L S++GH+ G++
Sbjct: 146 IFVVARKLNLDVRMIAAVVIINLVFTFAGPA------------LGTGAISWQGHIGGLIT 193
Query: 206 G 206
G
Sbjct: 194 G 194
>gi|309801976|ref|ZP_07696090.1| peptidase, S54 family [Bifidobacterium dentium JCVIHMP022]
gi|308221424|gb|EFO77722.1| peptidase, S54 family [Bifidobacterium dentium JCVIHMP022]
Length = 253
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVL--VSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
H+ +NM++L G LERM G F+ L VS L T +ML V+ + +T +Y
Sbjct: 89 HILFNMLTLWCVGPVLERMMGHWSFLALYAVSGLAGGTG---MMLWAVLSGASGWITPVY 145
Query: 142 QCAIG----FSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFK 197
+ F+A+L + I + L+NF +P + +PN +++
Sbjct: 146 GASGALFGLFAAILVVYRRIGLDIRSMMIWMLINFLMPVI-------------MPNIAWQ 192
Query: 198 GHLSGILVGLCYTETSLGRLVERSGRSVSR 227
HL G L G +T + L G+S+ R
Sbjct: 193 AHLGGFLFGGMFTWLLVSGLRILRGKSLPR 222
>gi|9963865|gb|AAG09733.1|AF226732_1 NPD007 [Homo sapiens]
Length = 434
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
Query: 46 VLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
+L QP G+ + + + N + Y RLV + + + L + + ER G+
Sbjct: 83 LLQQPLAPSGLTLKSEALRNWQVY-RLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGT 141
Query: 106 VQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-----AIGFSAVLFSMKTIRTR 160
V+ +V + + S +I+L V+ L + A GF+ V F+M + T
Sbjct: 142 VRHCFF--------TVIFAIFSAIIFLSFEAVSSLSKLGEVEDARGFTPVAFAMLGVTTV 193
Query: 161 QSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYT 210
+S + VP+V PW+ L+ ++P SF ++ G+ +GL Y
Sbjct: 194 RSRMRRALVFGMVVPSVLVPWL-LLGASWLIPQTSFLSNVCGLSIGLAYA 242
>gi|386820316|ref|ZP_10107532.1| putative membrane protein [Joostella marina DSM 19592]
gi|386425422|gb|EIJ39252.1| putative membrane protein [Joostella marina DSM 19592]
Length = 287
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 13/171 (7%)
Query: 72 LVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIY 131
+V A HG MHL++NM+ L R +F S ++ + V FL + +LSY I+
Sbjct: 65 IVTYAFFHGGFMHLFWNMLLLYFSSRIFLNLF-SKRYFLNVYFLGAVLGGAFFLLSYNIF 123
Query: 132 LMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVY--APWIELVIIHL 189
+ V IG SA + ++ P+ +L+ F++ Y ++ L ++ L
Sbjct: 124 PVFSRVNS---PLIGASAAIMAILIFVCTYIPNQEVRLIFFNIKLWYLGVAFVLLDLVQL 180
Query: 190 MVPNASFK-GHLSGILVGLCYTETSLGRLVERS--GRSVSRVVNTLTNVFK 237
+ N+ HL G L+G Y + +L E G V V++++N+FK
Sbjct: 181 PLGNSGGHIAHLGGALLGYVYAK----KLQEGKDIGSGVDGFVSSISNIFK 227
>gi|23098073|ref|NP_691539.1| hypothetical protein OB0618 [Oceanobacillus iheyensis HTE831]
gi|22776298|dbj|BAC12574.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 258
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 86/225 (38%), Gaps = 24/225 (10%)
Query: 29 PGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTI-----LNQRDYKRLVLSALEHGDDM 83
P L++I L+ +N L Q +G I + I + + RL+ HG M
Sbjct: 17 PVVSVLVIINITLWAINDLLQ--LQIGRFIEVYGIGFNAAIEAGQWWRLITPIFLHGGLM 74
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC 143
H+ +N SL++ G LE+M G +F++ I+ ++ + +L L
Sbjct: 75 HMLFNSFSLVLFGPALEQMLGRFKFILAYLGTAITANIA------IFFLQPMSYAHLGAS 128
Query: 144 AIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGI 203
F LF + D+ Q + + + I LV+ + PN S GHL G
Sbjct: 129 GAIFG--LFGIYVFMVMYRKDLIDQSSSQMIAVIVG--IGLVMTFIR-PNISILGHLFGF 183
Query: 204 LVGLCYTETSLGRLVERSGRSVSRVVNTLTNVFKLDDDCNGDDED 248
L G+ Y L + S R F DDD D +
Sbjct: 184 LSGIIYAPLLLKNVASYSPWMRRR------TKFAADDDAVQFDPN 222
>gi|116327525|ref|YP_797245.1| intramembrane protease [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116120269|gb|ABJ78312.1| Intramembrane protease [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
Length = 197
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 52 DSLG-ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVV 110
D LG ++ + + ++Y L+ S H D MHL +NM+S G+ LE G V+F++
Sbjct: 22 DKLGKFVLTPYRLKRNKNYYTLITSGFIHEDWMHLIFNMISFYSFGKNLETTVGPVKFLL 81
Query: 111 LVSFLIISTSV 121
I+ TSV
Sbjct: 82 FYLGTILITSV 92
>gi|145596990|ref|YP_001161287.1| rhomboid family protein [Salinispora tropica CNB-440]
gi|145306327|gb|ABP56909.1| Rhomboid family protein [Salinispora tropica CNB-440]
Length = 303
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 58/139 (41%), Gaps = 16/139 (11%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
+ RLV + H +HL NM +L + GR LE G +F+ L + +V +
Sbjct: 138 QWYRLVTAMFLHYGVIHLLLNMYALWILGRTLEASLGPARFLALYLVAGLGGNVA----A 193
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVII 187
Y+I N G A LF + R DV+ Q+L V I LV
Sbjct: 194 YLISAPNAATAGASTAIFGLFAALF---VVGRRMGRDVS-QVLPILV-------INLVFT 242
Query: 188 HLMVPNASFKGHLSGILVG 206
L VP S GHL G+ VG
Sbjct: 243 -LTVPGISIPGHLGGLAVG 260
>gi|393199141|ref|YP_006460983.1| membrane protein [Solibacillus silvestris StLB046]
gi|406666244|ref|ZP_11074012.1| Rhomboid protease gluP [Bacillus isronensis B3W22]
gi|327438472|dbj|BAK14837.1| uncharacterized membrane protein [Solibacillus silvestris StLB046]
gi|405385783|gb|EKB45214.1| Rhomboid protease gluP [Bacillus isronensis B3W22]
Length = 207
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 77/179 (43%), Gaps = 27/179 (15%)
Query: 58 ISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFL-- 115
+S + ++ ++ R++ S H MH+ +NM SL + G ELE++ G ++F+ + FL
Sbjct: 46 MSVNGLIAAGEWWRIITSMFLHAGFMHVLFNMFSLFLFGPELEKIAGKMRFLT-IYFLAG 104
Query: 116 IISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTH---QLLNF 172
I + Y + Y ++G S L+ + H QL
Sbjct: 105 IFGVAATY------------ATQDAYYASVGASGALYGIFGAFGALVYYTRHLFPQLRQI 152
Query: 173 SVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLC-----YTETSLGRLVERSGRSVS 226
+P + + +I+ + PN + HL G++ G + ++GR ++S + V
Sbjct: 153 ILPLI----VISIIMTFLTPNINIAAHLGGLVTGFILGVVYFNPKNMGRWRKQSIKRVK 207
>gi|227494200|ref|ZP_03924516.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436]
gi|226831934|gb|EEH64317.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436]
Length = 309
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 19/172 (11%)
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
+ IL ++ R + L HG +HL NM SL + G LER+ G+ +++ L + S
Sbjct: 123 NPILGYKEPWRFLTVMLVHGGLIHLALNMYSLYLVGNSLERVLGTYRYLALYVASGLGGS 182
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSM----KTIRTRQSPDVTHQLLNFSVPA 176
+ ++ + V + Y +G S +F + ++ + D + +V
Sbjct: 183 LAVLLWAMV------SLDSFYHVTVGASGAIFGLFAAVYVVQRKSGMDARAMGILLAVN- 235
Query: 177 VYAPWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRV 228
+ + + N S++GHL G++VG + L + R G S V
Sbjct: 236 --------LALGFTISNVSWQGHLGGMIVGALMSLALLRFALPRPGWLASEV 279
>gi|418731204|ref|ZP_13289617.1| peptidase, S54 family [Leptospira interrogans str. UI 12758]
gi|410774099|gb|EKR54118.1| peptidase, S54 family [Leptospira interrogans str. UI 12758]
Length = 197
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
++Y L S H D MHL +NMVS G+ LE G ++FV+ I+ TSV
Sbjct: 37 NKNYYTLFTSGFIHADWMHLIFNMVSFYSFGKNLEMTVGPIRFVLFYLGTILITSV---- 92
Query: 126 LSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP-AVYAPWIEL 184
+S+ L N + L + G VLF+ TI S + + +P AVYA + L
Sbjct: 93 ISWRKNLGNPHYSTL-GASGGVCGVLFA--TILFYPSLSLYMMFIPIPIPGAVYAV-LYL 148
Query: 185 VIIHLMVPNASFKG-----HLSGILVGLCYT 210
+ + + + G HL G L G+ +
Sbjct: 149 IYTYFSSKSGAADGINHDAHLWGALCGIAFA 179
>gi|306823968|ref|ZP_07457342.1| conserved membrane protein in rhomboid family protein
[Bifidobacterium dentium ATCC 27679]
gi|304552966|gb|EFM40879.1| conserved membrane protein in rhomboid family protein
[Bifidobacterium dentium ATCC 27679]
Length = 260
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVL--VSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
H+ +NM++L G LERM G F+ L VS L T +ML V+ + +T +Y
Sbjct: 96 HILFNMLTLWCVGPVLERMMGHWSFLALYAVSGLAGGTG---MMLWAVLSGASGWITPVY 152
Query: 142 QCAIG----FSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFK 197
+ F+A+L + I + L+NF +P + +PN +++
Sbjct: 153 GASGALFGLFAAILVVYRRIGLDIRSMMIWMLINFLMPVI-------------MPNIAWQ 199
Query: 198 GHLSGILVGLCYTETSLGRLVERSGRSVSR 227
HL G L G +T + L G+S+ R
Sbjct: 200 AHLGGFLFGGMFTWLLVSGLRILRGKSLPR 229
>gi|359683182|ref|ZP_09253183.1| intramembrane protease [Leptospira santarosai str. 2000030832]
gi|410450906|ref|ZP_11304933.1| peptidase, S54 family [Leptospira sp. Fiocruz LV3954]
gi|418746239|ref|ZP_13302569.1| peptidase, S54 family [Leptospira santarosai str. CBC379]
gi|418752404|ref|ZP_13308670.1| peptidase, S54 family [Leptospira santarosai str. MOR084]
gi|422002893|ref|ZP_16350127.1| intramembrane protease [Leptospira santarosai serovar Shermani str.
LT 821]
gi|409967293|gb|EKO35124.1| peptidase, S54 family [Leptospira santarosai str. MOR084]
gi|410015218|gb|EKO77323.1| peptidase, S54 family [Leptospira sp. Fiocruz LV3954]
gi|410792786|gb|EKR90711.1| peptidase, S54 family [Leptospira santarosai str. CBC379]
gi|417258363|gb|EKT87751.1| intramembrane protease [Leptospira santarosai serovar Shermani str.
LT 821]
gi|456873624|gb|EMF88986.1| peptidase, S54 family [Leptospira santarosai str. ST188]
Length = 197
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 58 ISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLII 117
++ + + ++Y L+ S H D MHL +NM+S G+ LE G ++F++ I+
Sbjct: 29 LTPYRLKRDKNYYTLLTSGFIHADWMHLIFNMISFYSFGKNLETTVGPIKFLLFYLGTIL 88
Query: 118 STSV 121
+TSV
Sbjct: 89 ATSV 92
>gi|421111197|ref|ZP_15571676.1| peptidase, S54 family [Leptospira santarosai str. JET]
gi|410803379|gb|EKS09518.1| peptidase, S54 family [Leptospira santarosai str. JET]
Length = 197
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 58 ISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLII 117
++ + + ++Y L+ S H D MHL +NM+S G+ LE G ++F++ I+
Sbjct: 29 LTPYRLKRDKNYYTLLTSGFIHADWMHLIFNMISFYSFGKNLETTVGPIKFLLFYLGTIL 88
Query: 118 STSV 121
+TSV
Sbjct: 89 ATSV 92
>gi|345022776|ref|ZP_08786389.1| hypothetical protein OTW25_15910 [Ornithinibacillus scapharcae
TW25]
Length = 254
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVV 110
+ + H +++Q +Y R + HG MH+ +N SL++ G LERM G F++
Sbjct: 47 LGVGHHYMIHQGEYWRFITPIFLHGGLMHMLFNSFSLVLFGPALERMIGKSMFLI 101
>gi|452838363|gb|EME40304.1| hypothetical protein DOTSEDRAFT_112179, partial [Dothistroma
septosporum NZE10]
Length = 232
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQ-FVVLVSFLIISTSVC 122
+N R RL L H D H N+++L+ E G++ F++ +
Sbjct: 13 INFRTLYRLNTYPLIHRDIFHYLLNILALVPLLERFESEHGTITTFILFTGPFGLLPGGL 72
Query: 123 YVMLSYVIYLMNHDVTELYQCAIGFSAVLF------SMKTIRTRQSPDVTHQLLNFSVPA 176
Y +L I+ N A+G S +F +MKT R + QL + +P
Sbjct: 73 YTILERFIFHFN-------GAAVGSSVWVFLLLCNEAMKTYRA----NPYFQLEDIKIPT 121
Query: 177 VYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
P +++I+ ++P+ S GHLSG G +
Sbjct: 122 WTTPLFLILVINFLIPHTSLLGHLSGAATGYLW 154
>gi|94818790|ref|NP_001035546.1| rhomboid domain-containing protein 2 isoform a [Homo sapiens]
gi|55628764|ref|XP_519156.1| PREDICTED: rhomboid domain-containing protein 2 isoform 2 [Pan
troglodytes]
gi|397475063|ref|XP_003808971.1| PREDICTED: rhomboid domain-containing protein 2 [Pan paniscus]
gi|118595708|sp|Q6NTF9.2|RHBD2_HUMAN RecName: Full=Rhomboid domain-containing protein 2
gi|5656743|gb|AAD45960.1|AC005067_2 Supported by Human EST H08032.1 (NID:g872854), mouse EST AA870042.1
(NID:g2965487), and genscan [Homo sapiens]
gi|410216274|gb|JAA05356.1| rhomboid domain containing 2 [Pan troglodytes]
gi|410255096|gb|JAA15515.1| rhomboid domain containing 2 [Pan troglodytes]
gi|410290920|gb|JAA24060.1| rhomboid domain containing 2 [Pan troglodytes]
gi|410348404|gb|JAA40806.1| rhomboid domain containing 2 [Pan troglodytes]
Length = 364
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 15/169 (8%)
Query: 46 VLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
+L QP G+ + + + N + Y RLV + + + L + + ER G+
Sbjct: 38 LLQQPLAPSGLTLKSEALRNWQVY-RLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGT 96
Query: 106 VQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-----AIGFSAVLFSMKTIRTR 160
V+ +V + + S +I+L V+ L + A GF+ V F+M + T
Sbjct: 97 VRHCFF--------TVIFAIFSAIIFLSFEAVSSLSKLGEVEDARGFTPVAFAMLGVTTV 148
Query: 161 QSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
+S + VP+V PW+ L+ ++P SF ++ G+ +GL Y
Sbjct: 149 RSRMRRALVFGMVVPSVLVPWL-LLGASWLIPQTSFLSNVCGLSIGLAY 196
>gi|374297549|ref|YP_005047740.1| hypothetical protein [Clostridium clariflavum DSM 19732]
gi|359827043|gb|AEV69816.1| putative membrane protein [Clostridium clariflavum DSM 19732]
Length = 517
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 44/221 (19%)
Query: 27 IPPGTLTLILIQTLLY-IMNVLA----QPWDSLGICISA--HTILNQRDYKRLVLSALEH 79
+P T LI+I L++ +MN+ A SL I A ++++ +Y R + H
Sbjct: 183 VPFITYGLIIINVLMWLVMNIYALVKGTNVQSLFIPFGAKENSLIFAGEYWRFLTPIFLH 242
Query: 80 GDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTE 139
D HL N +SL V GR +E M+G +FV + I S+ M S
Sbjct: 243 ADLEHLIMNCLSLFVFGRIVEGMYGHKKFVFIYFMAGIMGSIASFMFS------------ 290
Query: 140 LYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSV--PAVYAPWIE-----LVIIHLMV- 191
A+G S +F + LL FSV PA++ + +VII+L+
Sbjct: 291 -PHSAVGASGAIFGL-----------MGALLYFSVENPALFKKYFGNSILLMVIINLVYG 338
Query: 192 ---PNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRVV 229
P GH+ G++ G + + + ++ + + +SR V
Sbjct: 339 FIRPGIDNYGHIGGLIGG--FLASGIVKITKSPNKLLSRPV 377
>gi|116333635|ref|YP_795162.1| membrane-associated serine protease [Lactobacillus brevis ATCC 367]
gi|116098982|gb|ABJ64131.1| Membrane-associated serine protease [Lactobacillus brevis ATCC 367]
Length = 226
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 85/210 (40%), Gaps = 21/210 (10%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSLGICIS----AHTILNQRDYKRLVLSALEHGDDM 83
P T L++I L+++ LA SL + ++ + ++ Q + RL+ H
Sbjct: 15 PYMTTGLVVIMVLVFVAMTLAGGSTSLNVLVAFGAKVNPLIQQGQWWRLITPMFLHIGFT 74
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC 143
H++ NMV+L G +LE FG +F+++ FL+ ++ L T ++
Sbjct: 75 HIFLNMVTLYFVGTQLEAAFGHARFLII--FLVAGIGGNVASFCFLNSLSAGASTAIFGL 132
Query: 144 AIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGI 203
F A F M Q+P + F V + L P GHL G+
Sbjct: 133 ---FGA--FMMLGESFWQNPIIRQLARTFLAFVVMN-----IAFDLFTPGIDLAGHLGGL 182
Query: 204 LVGLCYTET----SLGRLVERSGRSVSRVV 229
+ G T +GR V + R V+ VV
Sbjct: 183 IAGFLVAYTVGVPQIGR-VSVTKRVVATVV 211
>gi|426356616|ref|XP_004045655.1| PREDICTED: rhomboid domain-containing protein 2 isoform 1 [Gorilla
gorilla gorilla]
Length = 364
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 15/169 (8%)
Query: 46 VLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
+L QP G+ + + + N + Y RLV + + + L + + ER G+
Sbjct: 38 LLQQPLAPSGLTLKSEALRNWQVY-RLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGT 96
Query: 106 VQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-----AIGFSAVLFSMKTIRTR 160
V+ +V + + S +I+L V+ L + A GF+ V F+M + T
Sbjct: 97 VRHCFF--------TVIFAIFSAIIFLSFEAVSSLSKLGEVEDARGFTPVAFAMLGVTTV 148
Query: 161 QSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
+S + VP+V PW+ L+ ++P SF ++ G+ +GL Y
Sbjct: 149 RSRMRRALVFGMVVPSVLVPWL-LLGASWLIPQTSFLSNVCGLSIGLAY 196
>gi|300777685|ref|ZP_07087543.1| S54 family peptidase [Chryseobacterium gleum ATCC 35910]
gi|300503195|gb|EFK34335.1| S54 family peptidase [Chryseobacterium gleum ATCC 35910]
Length = 213
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 62 TILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL 111
I N+++Y RL+ SA H D MHL++NM+SL + FG F++L
Sbjct: 35 AIANRKEYVRLISSAFLHADFMHLFFNMLSLYFFQGVVISFFGETGFLIL 84
>gi|418711617|ref|ZP_13272374.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|421117141|ref|ZP_15577510.1| peptidase, S54 family [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410011270|gb|EKO69392.1| peptidase, S54 family [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410768103|gb|EKR43359.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|456972660|gb|EMG13004.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
Length = 197
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
++Y L S H D MHL +NMVS G+ LE G ++FV+ I+ TSV
Sbjct: 37 NKNYYTLFTSGFIHADWMHLIFNMVSFYSFGKNLEMTVGPIRFVLFYLGTILITSV---- 92
Query: 126 LSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP-AVYAPWIEL 184
+S+ L N + L + G VLF+ TI S + + +P AVYA + L
Sbjct: 93 ISWRKNLDNPHYSTL-GASGGVCGVLFA--TILFYPSLSLYMMFIPIPIPGAVYAV-LYL 148
Query: 185 VIIHLMVPNASFKG-----HLSGILVGLCYT 210
+ + + + G HL G L G+ +
Sbjct: 149 IYTYFSSKSGAADGINHDAHLWGALCGIAFA 179
>gi|254583095|ref|XP_002499279.1| ZYRO0E08140p [Zygosaccharomyces rouxii]
gi|238942853|emb|CAR31024.1| ZYRO0E08140p [Zygosaccharomyces rouxii]
Length = 269
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
RL L H +HL++N+ SL+ E G+V V ++ I + Y ++ ++
Sbjct: 54 RLSNYPLIHLSWLHLFFNLFSLMGPLNLFESQHGTVYTGVALNLTAIFAGLLYCVVGKLL 113
Query: 131 YLMNH--DVTELYQCAIGFSAVLFSMKTIRTR--QSPDVTHQLLNFSVPAVYAPWIELVI 186
Y + + IG+ + S+ RT+ Q+P + P +P I L++
Sbjct: 114 YPEESVAGASGWFFTLIGYFSWKASLANPRTQVLQTP--------YHFPTALSPLILLLL 165
Query: 187 IHLMVPNASFKGHLSGILVG 206
I L++PNASF GHLSG+ +G
Sbjct: 166 ITLIIPNASFWGHLSGLTIG 185
>gi|433633128|ref|YP_007266755.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140070017]
gi|432164721|emb|CCK62183.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140070017]
Length = 249
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 26/183 (14%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYY 87
P T TLI + L+++M V + + + + + + Y RLV SA H MHL
Sbjct: 37 PVVTYTLISLNVLVFVMQVTVMGLERQ-LALWPPGVASGQTY-RLVTSAFLHYGAMHLLL 94
Query: 88 NMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGF 147
NM +L V G LE G ++F L + + SV L Y+I +N G
Sbjct: 95 NMWALYVVGPPLEMWLGRLRFGALYAVSALGGSV----LVYLIAPLNTATAGASGAVFG- 149
Query: 148 SAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHL----MVPNASFKGHLSGI 203
LF + R+ L+ V V A L++I+L + P S++GH+ G+
Sbjct: 150 ---LFGATFMVARR--------LHLDVRWVVA----LIVINLAFTFLAPAISWQGHVGGL 194
Query: 204 LVG 206
+ G
Sbjct: 195 VTG 197
>gi|45658768|ref|YP_002854.1| hypothetical protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|45602012|gb|AAS71491.1| cytoplasmic membrane protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 198
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 14/159 (8%)
Query: 58 ISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLII 117
++ + + ++Y L S H D MHL +NMVS G+ LE G ++F++ I+
Sbjct: 30 LTPYRLERNKNYYTLFTSGFIHADWMHLIFNMVSFYSFGKNLEMTVGPIRFILFYLGTIL 89
Query: 118 STSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP-A 176
TSV +S+ L N + L + G VLF+ TI S + + +P A
Sbjct: 90 ITSV----ISWRKNLGNPHYSTL-GASGGVCGVLFA--TILFYPSLSLYMMFIPIPIPGA 142
Query: 177 VYAPWIELVIIHLMVPNASFKG-----HLSGILVGLCYT 210
VYA + L+ + + + G HL G L G+ +
Sbjct: 143 VYAV-LYLIYTYFSSKSGAADGINHDAHLWGALCGIAFA 180
>gi|262200065|ref|YP_003271273.1| rhomboid family protein [Gordonia bronchialis DSM 43247]
gi|262083412|gb|ACY19380.1| Rhomboid family protein [Gordonia bronchialis DSM 43247]
Length = 303
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQF--VVLVSFLIISTS 120
I+ + +Y RL+ + H MH+ NM+SL + GR+LER G+ ++ V L+S L S +
Sbjct: 118 IVGEGEYWRLLTAGFLHFSVMHVAVNMISLYIIGRDLERALGTYRYLAVYLISLLGGSAA 177
Query: 121 V 121
V
Sbjct: 178 V 178
>gi|119592181|gb|EAW71775.1| rhomboid domain containing 2, isoform CRA_c [Homo sapiens]
Length = 254
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 15/167 (8%)
Query: 46 VLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
+L QP G+ + + + N + Y RLV + + + L + + ER G+
Sbjct: 83 LLQQPLAPSGLTLKSEALRNWQVY-RLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGT 141
Query: 106 VQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-----AIGFSAVLFSMKTIRTR 160
V+ +V + + S +I+L V+ L + A GF+ V F+M + T
Sbjct: 142 VRHCFF--------TVIFAIFSAIIFLSFEAVSSLSKLGEVEDARGFTPVAFAMLGVTTV 193
Query: 161 QSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGL 207
+S + VP+V PW+ L+ ++P SF ++ G+ +GL
Sbjct: 194 RSRMRRALVFGMVVPSVLVPWL-LLGASWLIPQTSFLSNVCGLSIGL 239
>gi|417762000|ref|ZP_12409996.1| peptidase, S54 family [Leptospira interrogans str. 2002000624]
gi|417769446|ref|ZP_12417362.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Pomona]
gi|417775235|ref|ZP_12423091.1| peptidase, S54 family [Leptospira interrogans str. 2002000621]
gi|418673108|ref|ZP_13234433.1| peptidase, S54 family [Leptospira interrogans str. 2002000623]
gi|418680768|ref|ZP_13242007.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418690065|ref|ZP_13251183.1| peptidase, S54 family [Leptospira interrogans str. FPW2026]
gi|418716234|ref|ZP_13276248.1| peptidase, S54 family [Leptospira interrogans str. UI 08452]
gi|418726000|ref|ZP_13284612.1| peptidase, S54 family [Leptospira interrogans str. UI 12621]
gi|421123434|ref|ZP_15583714.1| peptidase, S54 family [Leptospira interrogans str. Brem 329]
gi|400327490|gb|EJO79740.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400360788|gb|EJP16758.1| peptidase, S54 family [Leptospira interrogans str. FPW2026]
gi|409942189|gb|EKN87810.1| peptidase, S54 family [Leptospira interrogans str. 2002000624]
gi|409948596|gb|EKN98584.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Pomona]
gi|409960781|gb|EKO24534.1| peptidase, S54 family [Leptospira interrogans str. UI 12621]
gi|410343485|gb|EKO94716.1| peptidase, S54 family [Leptospira interrogans str. Brem 329]
gi|410574930|gb|EKQ37956.1| peptidase, S54 family [Leptospira interrogans str. 2002000621]
gi|410579891|gb|EKQ47727.1| peptidase, S54 family [Leptospira interrogans str. 2002000623]
gi|410787917|gb|EKR81646.1| peptidase, S54 family [Leptospira interrogans str. UI 08452]
gi|455669206|gb|EMF34365.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Fox 32256]
Length = 197
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 14/159 (8%)
Query: 58 ISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLII 117
++ + + ++Y L S H D MHL +NMVS G+ LE G ++FV+ I+
Sbjct: 29 LTPYRLERNKNYYTLFTSGFIHADWMHLIFNMVSFYSFGKNLEMTVGPIRFVLFYLGTIL 88
Query: 118 STSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP-A 176
TSV +S+ L N + L + G VLF+ TI S + + +P A
Sbjct: 89 ITSV----ISWRKNLDNPHYSTL-GASGGVCGVLFA--TILFYPSLSLYMMFIPIPIPGA 141
Query: 177 VYAPWIELVIIHLMVPNASFKG-----HLSGILVGLCYT 210
VYA + L+ + + + G HL G L G+ +
Sbjct: 142 VYAV-LYLIYTYFSSKSGAADGINHDAHLWGALCGIAFA 179
>gi|255534977|ref|YP_003095348.1| hypothetical protein FIC_00833 [Flavobacteriaceae bacterium
3519-10]
gi|255341173|gb|ACU07286.1| hypothetical protein FIC_00833 [Flavobacteriaceae bacterium
3519-10]
Length = 218
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 62 TILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL 111
IL +++Y RL+ + HGD MHL +NM++L G + FG++ F+V+
Sbjct: 35 AILQRKEYVRLISAGFLHGDMMHLLFNMMTLYFFGPIVLEAFGALGFLVV 84
>gi|87310180|ref|ZP_01092312.1| probable glpG protein [Blastopirellula marina DSM 3645]
gi|87287170|gb|EAQ79072.1| probable glpG protein [Blastopirellula marina DSM 3645]
Length = 312
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
RL+ HG MH+ +NM G LER GS +++++V L I +V S I
Sbjct: 171 RLITPIFPHGGLMHIAFNMYMWYSFGGILERRLGSGRYLMMVLGLAIFGNVAAASASIFI 230
Query: 131 YLMNHDVTELYQCAIGFSAVLFSM---KTIRTRQSPDVTHQLLNFSVPAVYAPWIELVII 187
+ +ELY AIG S VLF + +++ P L + SV + W L +
Sbjct: 231 ---TGNASELY--AIGISGVLFGLFGFAWVKSTFEPQFGIYLPSQSV-LMMMLWFGLCWL 284
Query: 188 HLMVPNASFKGHLSGILVGL 207
V N + GH G++ G+
Sbjct: 285 GF-VGNIANWGHTCGLIAGV 303
>gi|433601853|ref|YP_007034222.1| membrane protein [Saccharothrix espanaensis DSM 44229]
gi|407879706|emb|CCH27349.1| membrane protein [Saccharothrix espanaensis DSM 44229]
Length = 286
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
++ RL+ S H HL NM++L V GRELE FG ++F+ L ++ V
Sbjct: 122 EWWRLLTSGFLHYGPAHLGLNMIALYVLGRELEPTFGKIRFLALYLVSLLGGGV------ 175
Query: 128 YVIYLMNH 135
+YL H
Sbjct: 176 -AVYLFGH 182
>gi|46255831|gb|AAH69017.1| Rhomboid domain containing 2 [Homo sapiens]
Length = 364
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 15/169 (8%)
Query: 46 VLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
+L QP G+ + + + N + Y RLV + + + L + + ER G+
Sbjct: 38 LLQQPLAPSGLTLKSEALRNWQVY-RLVTYIFVYENPISLPCGAIIIWRFAGNFERTVGT 96
Query: 106 VQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-----AIGFSAVLFSMKTIRTR 160
V+ +V + + S +I+L V+ L + A GF+ V F+M + T
Sbjct: 97 VRHCFF--------TVIFAIFSAIIFLSFEAVSSLSKLGEVEDARGFTPVAFAMLGVTTV 148
Query: 161 QSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
+S + VP+V PW+ L+ ++P SF ++ G+ +GL Y
Sbjct: 149 RSRMRRALVFGMVVPSVLVPWL-LLGASWLIPQTSFLSNVCGLSIGLAY 196
>gi|451927292|gb|AGF85170.1| membrane protein [Moumouvirus goulette]
Length = 165
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 22/140 (15%)
Query: 73 VLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYL 132
+L H + HL N +SL LE + G QF + + F+ I +S+ ++Y+
Sbjct: 33 LLRTFYHANLEHLLANSISL-YSLSFLEDLMGHKQFAMAIIFIWIVSSI-------ILYI 84
Query: 133 MNHDVTELYQCAIGFSAVLFSMKTIRTR---QSPDVTHQLLNFSVPAVYAPWIELVIIHL 189
++ + +GFS V+F + I Q +T L S+ L
Sbjct: 85 IHALIPSRKVYTVGFSGVIFGLIVIYYMSLGQGAGITLTGLVVSILP-----------QL 133
Query: 190 MVPNASFKGHLSGILVGLCY 209
++P SF+GHLSGI+ GL Y
Sbjct: 134 VIPGISFEGHLSGIIAGLIY 153
>gi|334335573|ref|YP_004540725.1| rhomboid family protein [Isoptericola variabilis 225]
gi|334105941|gb|AEG42831.1| Rhomboid family protein [Isoptericola variabilis 225]
Length = 292
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 20/143 (13%)
Query: 71 RLVLSALEHGDD--MHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
R + +A H +H+ +NM +L + G+ LE + G +FVVL + SV +++L+
Sbjct: 121 RFLTAAFLHSTSGVLHILFNMWALWITGQALEPLLGRGRFVVLALLSAVGGSVGWLLLAG 180
Query: 129 VIYLMNHDVTELYQCAIGFSAVLF----SMKTIRTRQSPDVTHQLLNFSVPAVYAPWIEL 184
D T YQ +G S ++F ++ + R ++ ++ V
Sbjct: 181 ----GPADGT-WYQGVVGASGMVFGLFGALIPVLRRMGGSARQIVVLLAINGV------- 228
Query: 185 VIIHLMVPNASFKGHLSGILVGL 207
I +VP +++ HL G++ GL
Sbjct: 229 --IGFVVPGIAWQAHLGGLVTGL 249
>gi|45198366|ref|NP_985395.1| AFL155Cp [Ashbya gossypii ATCC 10895]
gi|74693150|sp|Q755H8.1|RBD2_ASHGO RecName: Full=Rhomboid protein 2
gi|44984253|gb|AAS53219.1| AFL155Cp [Ashbya gossypii ATCC 10895]
gi|374108623|gb|AEY97529.1| FAFL155Cp [Ashbya gossypii FDAG1]
Length = 261
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 110/247 (44%), Gaps = 25/247 (10%)
Query: 18 QVLSVGFHLIPPGTLT--LILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLS 75
+L G H PG LT L + TL+Y++N + + + + A L + RL L
Sbjct: 5 SMLRTGVH--KPGALTAGLSVFLTLVYVLNWVFPINEKILLDPGA---LRKLQLTRLSLY 59
Query: 76 ALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNH 135
L H HL N++SL V E G+V + ++ L I T V Y ++ ++Y
Sbjct: 60 PLAHLSIFHLLLNLMSLFVPLSMFEASHGTVFTGITLNLLAIVTGVVYCLVGMLLY---- 115
Query: 136 DVTELYQCAIGFSAVLFSMKTIRTRQSPDVT--HQLLNFSVPAVYAPWIELVIIHLMVPN 193
+Y G S F++ Q ++L + +P +Y P + LV++ L++P
Sbjct: 116 --PNVYVG--GASGWCFTLCGYFAVQEAGFRPHYELASLKMPTLYIPLVFLVLVTLLMPG 171
Query: 194 ASFKGHLSGILVG--LCYTE------TSLGRLVERSGRSVSRVVNTLTNVFKLDDDCNGD 245
+SF GHL G+ +G + + E T G L+ + + R ++ + +V K + + D
Sbjct: 172 SSFVGHLIGLGLGYLIGFRERWLQMATPPGWLIVKIETWLDRWISMIPSVVKYHRESSVD 231
Query: 246 DEDSDTS 252
T
Sbjct: 232 RTAGYTP 238
>gi|294827700|ref|NP_710831.2| intramembrane serine protease [Leptospira interrogans serovar Lai
str. 56601]
gi|386073007|ref|YP_005987324.1| intramembrane serine protease [Leptospira interrogans serovar Lai
str. IPAV]
gi|421084984|ref|ZP_15545839.1| peptidase, S54 family [Leptospira santarosai str. HAI1594]
gi|421102026|ref|ZP_15562636.1| peptidase, S54 family [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|293385543|gb|AAN47849.2| intramembrane serine protease [Leptospira interrogans serovar Lai
str. 56601]
gi|353456796|gb|AER01341.1| intramembrane serine protease [Leptospira interrogans serovar Lai
str. IPAV]
gi|410368171|gb|EKP23549.1| peptidase, S54 family [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410432377|gb|EKP76733.1| peptidase, S54 family [Leptospira santarosai str. HAI1594]
gi|456826075|gb|EMF74445.1| peptidase, S54 family [Leptospira interrogans serovar Canicola str.
LT1962]
gi|456982498|gb|EMG19087.1| peptidase, S54 family [Leptospira interrogans serovar Copenhageni
str. LT2050]
Length = 197
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
++Y L S H D MHL +NMVS G+ LE G ++F++ I+ TSV
Sbjct: 37 NKNYYTLFTSGFIHADWMHLIFNMVSFYSFGKNLEMTVGPIRFILFYLGTILITSV---- 92
Query: 126 LSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP-AVYAPWIEL 184
+S+ L N + L + G VLF+ TI S + + +P AVYA + L
Sbjct: 93 ISWRKNLGNPHYSTL-GASGGVCGVLFA--TILFYPSLSLYMMFIPIPIPGAVYAV-LYL 148
Query: 185 VIIHLMVPNASFKG-----HLSGILVGLCYT 210
+ + + + G HL G L G+ +
Sbjct: 149 IYTYFSSKSGAADGINHDAHLWGALCGIAFA 179
>gi|449480070|ref|XP_004177070.1| PREDICTED: rhomboid domain-containing protein 2 [Taeniopygia
guttata]
Length = 312
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 12/149 (8%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCY 123
L+ + RL+ + D + L V + ER G+V+ +L + +
Sbjct: 63 LHDGEVHRLITYIFIYEDLISLACGTVIIWYFAGSFERNVGTVKHCIL--------TATF 114
Query: 124 VMLSYVIYL-MNHDVTELYQC--AIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
+LS ++YL + V+ L + A GF V F+M + T +S L VP V P
Sbjct: 115 SVLSALLYLSLQPLVSRLLEVGDAKGFMPVAFAMLGVSTTRSRMKRTLLFGCRVPVVLVP 174
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCY 209
W+ L VP++S G+L G+LVG Y
Sbjct: 175 WLGLCPAWF-VPHSSLLGNLCGLLVGEAY 202
>gi|57640721|ref|YP_183199.1| integral membrane protein rhomboid-like protein [Thermococcus
kodakarensis KOD1]
gi|57159045|dbj|BAD84975.1| integral membrane protein Rhomboid homolog [Thermococcus
kodakarensis KOD1]
Length = 206
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 88/210 (41%), Gaps = 35/210 (16%)
Query: 24 FHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYK--------RLVLS 75
FH T TL LI +Y++ + + L I S +L Q +Y +L +
Sbjct: 7 FHRYGRATFTLFLINVAVYVVEAVLSGGNFLSIRGSVLALLGQWNYAVLNYGYWWQLFTA 66
Query: 76 ALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNH 135
H + +H+++NM L+ GR+LER+ G + V+++Y++ +
Sbjct: 67 MFVHVNIIHIFFNMYFLLTMGRQLERVLGPRR----------------VVMTYIVSGLVG 110
Query: 136 DVTELY-----QCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLM 190
+V L+ + G S LF + S V + + A + L +I+ +
Sbjct: 111 NVLTLFLKPPMTVSAGASGALFGIVGALITISGVVGGNMQAAMMNAFF-----LFLINSV 165
Query: 191 VPNASFKGHLSGILVGLCYTETSLGRLVER 220
+P + HL G+L G+ G+++ R
Sbjct: 166 LPGVNAYAHLGGLLAGIA-IGYYYGKVIRR 194
>gi|385809854|ref|YP_005846250.1| hypothetical protein IALB_1272 [Ignavibacterium album JCM 16511]
gi|383801902|gb|AFH48982.1| Hypothetical protein IALB_1272 [Ignavibacterium album JCM 16511]
Length = 267
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 84/217 (38%), Gaps = 35/217 (16%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
+L+ HG H+++NM +L + G E+E + GS +F++ F I+ + ++ +S ++
Sbjct: 36 QLITYQFMHGGFGHIFFNMFALWMFGAEVEYILGSKKFLIFYLFSGITAGLLHLFISPLL 95
Query: 131 YLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWI-------E 183
IG S +F + T PD + L F +P V A ++ E
Sbjct: 96 -------GSPLAVTIGASGAVFGVMTAFAMLFPD-RYIFLYFLIP-VKAKYLIGFLIVFE 146
Query: 184 LVIIHLMVPNASFKGHLSGILVGLCY------TETSLGRLVERSGRSVSRV---VNTLTN 234
+ I N + HL G L G + L ++S R + T
Sbjct: 147 FLAIDSAASNVAHLAHLGGALFGFLFILFDKSNPVEFRNLFKKSFYYKKRTPPDFGSYTY 206
Query: 235 VFKLDDDCNGDDEDSDTSASFLDFTDNTKNDAATIVS 271
+ DDD A F D N K+D TI
Sbjct: 207 GSRNDDDVQ--------EAKFYDL--NKKDDEETITQ 233
>gi|119592179|gb|EAW71773.1| rhomboid domain containing 2, isoform CRA_a [Homo sapiens]
Length = 409
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 15/169 (8%)
Query: 46 VLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
+L QP G+ + + + N + Y RLV + + + L + + ER G+
Sbjct: 83 LLQQPLAPSGLTLKSEALRNWQVY-RLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGT 141
Query: 106 VQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-----AIGFSAVLFSMKTIRTR 160
V+ +V + + S +I+L V+ L + A GF+ V F+M + T
Sbjct: 142 VRHCFF--------TVIFAIFSAIIFLSFEAVSSLSKLGEVEDARGFTPVAFAMLGVTTV 193
Query: 161 QSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
+S + VP+V PW+ L+ ++P SF ++ G+ +GL Y
Sbjct: 194 RSRMRRALVFGMVVPSVLVPWL-LLGASWLIPQTSFLSNVCGLSIGLAY 241
>gi|298706194|emb|CBJ29235.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 256
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 22/156 (14%)
Query: 60 AHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIIST 119
A+ I + ++ RLV + + HG HL N ++L GR E G+ +FV L
Sbjct: 108 AYAITDHGEWYRLVTAVMLHGGWGHLAGNSMALFNIGRGTETYMGTEKFVALY------- 160
Query: 120 SVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSM---KTIRTRQSPDVTHQLLNFSVP- 175
VC + V+ + +T ++G S +F + + + P + L SV
Sbjct: 161 -VCSGVSGNVLSCIVDPLTP----SLGASGAIFGLLGAEAMIHLAGPKASMPLFVSSVGQ 215
Query: 176 -AVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYT 210
A +A V++ L+VPN GHL G + G T
Sbjct: 216 TAFFA-----VLVGLLVPNIDHWGHLGGFVGGAALT 246
>gi|385989630|ref|YP_005907928.1| integral membrane protein [Mycobacterium tuberculosis CCDC5180]
gi|385993221|ref|YP_005911519.1| integral membrane protein [Mycobacterium tuberculosis CCDC5079]
gi|424945902|ref|ZP_18361598.1| integral membrane protein [Mycobacterium tuberculosis NCGM2209]
gi|449062098|ref|YP_007429181.1| integral membrane protein [Mycobacterium bovis BCG str. Korea
1168P]
gi|339293175|gb|AEJ45286.1| integral membrane protein [Mycobacterium tuberculosis CCDC5079]
gi|339296823|gb|AEJ48933.1| integral membrane protein [Mycobacterium tuberculosis CCDC5180]
gi|358230417|dbj|GAA43909.1| integral membrane protein [Mycobacterium tuberculosis NCGM2209]
gi|379026212|dbj|BAL63945.1| integral membrane protein [Mycobacterium tuberculosis str. Erdman =
ATCC 35801]
gi|449030606|gb|AGE66033.1| integral membrane protein [Mycobacterium bovis BCG str. Korea
1168P]
Length = 212
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 26/186 (13%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMV 90
T TLI + L+++M V + + + + + + Y RLV SA H MHL NM
Sbjct: 3 TYTLISLNALVFVMQVTVMGLER-QLALWPPAVASGQTY-RLVTSAFLHYGAMHLLLNMW 60
Query: 91 SLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAV 150
+L V G LE G ++F L + + SV L Y+I +N G
Sbjct: 61 ALYVVGPPLEMWLGRLRFGALYAVSALGGSV----LVYLIAPLNTATAGASGAVFG---- 112
Query: 151 LFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHL----MVPNASFKGHLSGILVG 206
LF + R+ L+ V V + L++I+L + P S++GH+ G++ G
Sbjct: 113 LFGATFMVARR--------LHLDVRWV----VALIVINLAFTFLAPAISWQGHVGGLVTG 160
Query: 207 LCYTET 212
T
Sbjct: 161 ALVAAT 166
>gi|418738312|ref|ZP_13294708.1| peptidase, S54 family [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410746486|gb|EKQ99393.1| peptidase, S54 family [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 197
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 58 ISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLII 117
++ + + ++Y L+ S H D MHL +NM+S G+ LE G ++F++ I+
Sbjct: 29 LTPYRLKRNKNYYTLITSGFIHADWMHLIFNMISFYSFGKNLETTVGPIKFLLFYLGTIL 88
Query: 118 STSV 121
TSV
Sbjct: 89 ITSV 92
>gi|456012071|gb|EMF45791.1| Rhomboid family protein [Planococcus halocryophilus Or1]
Length = 202
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 33 TLILIQTLLYIMNVLAQPWDSLGICISAHTI-----LNQRDYKRLVLSALEHGDDMHLYY 87
TLI + L+Y++ L SLG I + + + + + R H MHL +
Sbjct: 20 TLIALNLLVYVLTWL----PSLGQWIYFYGVGSNFYIAEGQWWRFFTPMFLHSGVMHLLF 75
Query: 88 NMVSLIVKGRELERMFGSVQFVVL 111
NM SL + G ELER+ G ++F+ +
Sbjct: 76 NMFSLFLFGPELERLTGKIRFITI 99
>gi|430376120|ref|ZP_19430523.1| rhomboid family protein [Moraxella macacae 0408225]
gi|429541351|gb|ELA09379.1| rhomboid family protein [Moraxella macacae 0408225]
Length = 203
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 28/154 (18%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS-VQFVVLVSFLIISTSVC 122
+ + +R V L H D MHL++NM +L G+ +ER F S V V + F ++ V
Sbjct: 34 IQRGQVERFVTHGLLHADGMHLFFNMFTLFSFGQVVERFFASRVSAVGYLLFYAVAIVVA 93
Query: 123 YVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWI 182
++ S+V + +H + L + SAV+FS + L+N PW
Sbjct: 94 -ILPSFVKHKNDHRYSSL-GASGAVSAVVFS-------------YVLMN--------PWA 130
Query: 183 ELVIIHLMVPNASFKGHLSGILVGLCYTETSLGR 216
L++ + VP F +G+ VG GR
Sbjct: 131 TLLVFFVPVPAIVF----AGLYVGYSVWADGHGR 160
>gi|418718375|ref|ZP_13277909.1| peptidase, S54 family [Leptospira borgpetersenii str. UI 09149]
gi|421092732|ref|ZP_15553464.1| peptidase, S54 family [Leptospira borgpetersenii str. 200801926]
gi|410364583|gb|EKP15604.1| peptidase, S54 family [Leptospira borgpetersenii str. 200801926]
gi|410744855|gb|EKQ93590.1| peptidase, S54 family [Leptospira borgpetersenii str. UI 09149]
gi|456889841|gb|EMG00711.1| peptidase, S54 family [Leptospira borgpetersenii str. 200701203]
Length = 197
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 58 ISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLII 117
++ + + ++Y L+ S H D MHL +NM+S G+ LE G ++F++ I+
Sbjct: 29 LTPYRLKRNKNYYTLITSGFIHADWMHLIFNMISFYSFGKNLETTVGPIKFLLFYLGTIL 88
Query: 118 STSV 121
TSV
Sbjct: 89 ITSV 92
>gi|405979365|ref|ZP_11037709.1| hypothetical protein HMPREF9241_00432 [Actinomyces turicensis
ACS-279-V-Col4]
gi|404392746|gb|EJZ87804.1| hypothetical protein HMPREF9241_00432 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 284
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 20/179 (11%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMV 90
T TLI I L+I++ + +G + + + R R + +A H MH+ +NM+
Sbjct: 70 TYTLIGINVALFILSFVL---PLVGNWLFFNPAVGYRQVWRFLTTAFLHSGFMHIAFNML 126
Query: 91 SLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAV 150
+L G ELE++ G ++ L +L+ + +L++V+ + L +G S
Sbjct: 127 ALYSVGVELEQVLGRTRY--LSVYLLSAIGASLFVLAWVLI----QPSSLGTVTVGASGA 180
Query: 151 ---LFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
LF + +QS T ++ + ++I +VPN S++GH+ G+ G
Sbjct: 181 VFGLFGAMFVLQKQSGMDTRAVVGLLL--------VNLLIGFIVPNVSWQGHVGGLATG 231
>gi|359776068|ref|ZP_09279385.1| peptidase S54 family protein [Arthrobacter globiformis NBRC 12137]
gi|359306508|dbj|GAB13214.1| peptidase S54 family protein [Arthrobacter globiformis NBRC 12137]
Length = 293
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 26/147 (17%)
Query: 71 RLVLSALEHGDD--MHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
R++ SA H +H+ NM +L + G+ LE + G ++F+ + I SV Y++L+
Sbjct: 124 RMLTSAFLHSQGFLLHIVLNMYTLWIFGQALEPLLGRIRFLAVYLLSAIGGSVGYLLLTP 183
Query: 129 VIYLMNHDVTELYQCAIGFSAV---LFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELV 185
+ L L +G S LF + R T QL W+ +
Sbjct: 184 I--LPEGGPVGL----VGASGAIFGLFGAMLVVQRHRGGETRQL-----------WVLIA 226
Query: 186 I---IHLMVPNASFKGHLSGILVG-LC 208
I I MVP +++ HL G + G LC
Sbjct: 227 INGVIGFMVPQIAWQAHLGGFITGALC 253
>gi|271961709|ref|YP_003335905.1| rhomboid-like protein [Streptosporangium roseum DSM 43021]
gi|270504884|gb|ACZ83162.1| rhomboid-like protein [Streptosporangium roseum DSM 43021]
Length = 291
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 36/191 (18%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICI------SAHTILNQRDYKRLVLSALEH----- 79
+T+ + L I+N+LA +SL + S+ + + ++ RL+ A H
Sbjct: 72 AVTVPRVTWALLIVNILAYAAESLSPSVVSAFQMSSGHVAFRGEWWRLITGAFLHMPLSA 131
Query: 80 -GDDM-HLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDV 137
G + H+ +NM +L G ELER GS++F+VL + SV IYL
Sbjct: 132 GGFALTHILFNMWALYAIGPELERRLGSLRFLVLYLLSALGGSV-------AIYLFGIA- 183
Query: 138 TELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIEL--VIIHLMVPNAS 195
A+G S ++ M V + L + V W+ V++ VP+ S
Sbjct: 184 ------AVGASGAIYGMFGALF-----VVSKKLGYDARGVL--WLIGINVVLTFTVPSIS 230
Query: 196 FKGHLSGILVG 206
++GHL G++ G
Sbjct: 231 WQGHLGGLITG 241
>gi|352081808|ref|ZP_08952650.1| Rhomboid family protein [Rhodanobacter sp. 2APBS1]
gi|389796489|ref|ZP_10199541.1| hypothetical protein UUC_02216 [Rhodanobacter sp. 116-2]
gi|351682714|gb|EHA65810.1| Rhomboid family protein [Rhodanobacter sp. 2APBS1]
gi|388448413|gb|EIM04397.1| hypothetical protein UUC_02216 [Rhodanobacter sp. 116-2]
Length = 201
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 62 TILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
I QR+Y RLV L H D HL +NM++L GR +E F +
Sbjct: 34 AIARQREYHRLVTYGLVHADFGHLLFNMITLFFFGRVMEGFFAA 77
>gi|170780474|ref|YP_001708806.1| rhomboid family membrane protein [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155042|emb|CAQ00138.1| putative rhomboid family membrane protein [Clavibacter
michiganensis subsp. sepedonicus]
Length = 287
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 24/147 (16%)
Query: 68 DYK--RLVLSALEHGDD--MHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCY 123
DY+ R++ SA H +H+ +NM+S+ V GR LE M G +F+ L FLI +
Sbjct: 116 DYEPWRMLTSAFTHSPSSILHIVFNMLSVFVFGRVLEPMLGRARFLAL--FLISALGG-- 171
Query: 124 VMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIE 183
S + ++ + E Q +G S +F + + +L + P +
Sbjct: 172 ---SLAVEVIGSAMGEPLQAVVGASGAIFGLMG---------GYFVLARKLGGNVGPLLG 219
Query: 184 LVIIHLM----VPNASFKGHLSGILVG 206
++ I+L+ V S++ H+ G++ G
Sbjct: 220 IIAINLLLGFVVQGVSWQAHVGGLVTG 246
>gi|429849740|gb|ELA25087.1| rhomboid protein 2 [Colletotrichum gloeosporioides Nara gc5]
Length = 266
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 79 HGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL-VSFLIISTSVCYVMLSYVIYLMNHDV 137
H + +H+ N+ +L E FG++ + L + L +V YV++ ++ N V
Sbjct: 71 HVNFIHVILNLAALTPLLERFEAEFGTLTSIALFIGPLSTIPAVVYVLIERFLFKGNVSV 130
Query: 138 TELYQCAIGFSAVLFSMKTIRT-RQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASF 196
A + +L M+ IRT + +P +T + S+P P I ++++ +VP S
Sbjct: 131 ----MGASVWVFLLLGMEAIRTYKTNPYLT--IATHSIPTWTTPLILVLVVTALVPGTSL 184
Query: 197 KGHLSGILVGLCY 209
GHL G+LVG +
Sbjct: 185 LGHLCGVLVGYLF 197
>gi|325961464|ref|YP_004239370.1| hypothetical protein Asphe3_00160 [Arthrobacter phenanthrenivorans
Sphe3]
gi|323467551|gb|ADX71236.1| uncharacterized membrane protein [Arthrobacter phenanthrenivorans
Sphe3]
Length = 291
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 20/158 (12%)
Query: 71 RLVLSALEH--GDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
R++ +A H G +H+ NM L + G+ LE + G V+F+ + I SV Y+ L+
Sbjct: 124 RMLTAAFLHSQGFILHIVLNMYMLWIFGQALEPLLGRVRFLAVYLLSAIGGSVGYLALTP 183
Query: 129 VIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVI-- 186
++ AI F LF + RQ T QL W+ + I
Sbjct: 184 ILPPGGPVGVVGASGAI-FG--LFGAMLLVQRQRGGDTRQL-----------WVLIAING 229
Query: 187 -IHLMVPNASFKGHLSGILVG-LCYTETSLGRLVERSG 222
I ++P +++ HL G++ G LC + R G
Sbjct: 230 VIGFLIPQIAWQAHLGGLITGALCAAVVAYAPRGRRQG 267
>gi|436835582|ref|YP_007320798.1| Rhomboid family protein [Fibrella aestuarina BUZ 2]
gi|384066995|emb|CCH00205.1| Rhomboid family protein [Fibrella aestuarina BUZ 2]
Length = 207
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 19/134 (14%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGI----CISAHTILNQRDYKRLVLSALEHGDDMHLY 86
++TL+LI L + + W++ G+ ++ + + +Q Y RLV S H D HL
Sbjct: 2 SITLLLI---LVTVGISLAAWNNPGLMDRWIMNPYAVAHQGQYYRLVTSGFLHADLSHLL 58
Query: 87 YNMVSLIVKGRELE----RMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQ 142
+NM+S G +E ++F V +VLV F +I+ +++S + L+ H Y
Sbjct: 59 FNMLSFYFFGGTVEAIFSQLFPGVGGIVLVVFYLIA-----IIISDIPTLIKHKDNSRYN 113
Query: 143 ---CAIGFSAVLFS 153
+ G SA++F+
Sbjct: 114 SLGASGGVSAIIFA 127
>gi|417765657|ref|ZP_12413614.1| peptidase, S54 family [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|417786203|ref|ZP_12433899.1| peptidase, S54 family [Leptospira interrogans str. C10069]
gi|418669212|ref|ZP_13230602.1| peptidase, S54 family [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|418701952|ref|ZP_13262870.1| peptidase, S54 family [Leptospira interrogans serovar Bataviae str.
L1111]
gi|418705885|ref|ZP_13266738.1| peptidase, S54 family [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|421126800|ref|ZP_15587025.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421133053|ref|ZP_15593209.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|400352016|gb|EJP04223.1| peptidase, S54 family [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|409950748|gb|EKO05271.1| peptidase, S54 family [Leptospira interrogans str. C10069]
gi|410022807|gb|EKO89576.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410435655|gb|EKP84786.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|410755047|gb|EKR16686.1| peptidase, S54 family [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|410759084|gb|EKR25303.1| peptidase, S54 family [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410764414|gb|EKR35128.1| peptidase, S54 family [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|455789781|gb|EMF41688.1| peptidase, S54 family [Leptospira interrogans serovar Lora str. TE
1992]
Length = 197
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
++Y L S H D MHL +NMVS G+ LE G ++F++ I+ TSV
Sbjct: 37 NKNYYTLFTSGFIHADWMHLIFNMVSFYSFGKNLEMTVGPIRFILFYLGTILITSV---- 92
Query: 126 LSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP-AVYAPWIEL 184
+S+ L N + L + G VLF+ TI S + + +P AVYA + L
Sbjct: 93 ISWRKNLDNPHYSTL-GASGGVCGVLFA--TILFYPSLSLYMMFIPIPIPGAVYAV-LYL 148
Query: 185 VIIHLMVPNASFKG-----HLSGILVGLCYT 210
+ + + + G HL G L G+ +
Sbjct: 149 IYTYFSSKSGAADGINHDAHLWGALCGIAFA 179
>gi|419967548|ref|ZP_14483436.1| rhomboid family protein [Rhodococcus opacus M213]
gi|424859689|ref|ZP_18283671.1| rhomboid family protein [Rhodococcus opacus PD630]
gi|356661133|gb|EHI41465.1| rhomboid family protein [Rhodococcus opacus PD630]
gi|414567056|gb|EKT77861.1| rhomboid family protein [Rhodococcus opacus M213]
Length = 305
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 64/146 (43%), Gaps = 21/146 (14%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQF--VVLVSFLIISTSVCYVMLSY 128
R++ S H +HL NM +L V GR+ E + G ++ V VS L S +V L
Sbjct: 132 RVLGSGFLHFGIIHLAVNMFALWVIGRDTELVLGRARYACVYFVSLLGGSAAVMLFQLGA 191
Query: 129 VIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIH 188
V + V L +G AV+ +R R+SP SV AV VII
Sbjct: 192 VTAGASGAVFGL----MGAQAVIL----LRLRRSPAPV-----ISVIAVN------VIIS 232
Query: 189 LMVPNASFKGHLSGILVGLCYTETSL 214
+ +P S GHL G++ G T L
Sbjct: 233 ITIPGISLWGHLGGLVAGAAATAGIL 258
>gi|389818133|ref|ZP_10208574.1| hypothetical protein A1A1_11051 [Planococcus antarcticus DSM 14505]
gi|388464065|gb|EIM06401.1| hypothetical protein A1A1_11051 [Planococcus antarcticus DSM 14505]
Length = 202
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 33 TLILIQTLLYIMNVLAQPWDSLGI-CISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVS 91
TLI + L+Y + L D L + ++ + + + R HG MHL +NM S
Sbjct: 20 TLIALNLLVYALTWLPLLGDWLYFYGVGSNFYIAEGQWWRFFTPIFLHGGLMHLLFNMFS 79
Query: 92 LIVKGRELERMFGSVQFVVL 111
L + G ELER+ G V+F +
Sbjct: 80 LFLFGPELERLTGKVRFTTI 99
>gi|227549462|ref|ZP_03979511.1| S54 family peptidase [Corynebacterium lipophiloflavum DSM 44291]
gi|227078461|gb|EEI16424.1| S54 family peptidase [Corynebacterium lipophiloflavum DSM 44291]
Length = 197
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 25/144 (17%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
+ RL+ + H D HL+ NM+ L++ G E+ER G+ +FVV + V + S
Sbjct: 60 GWLRLLTAGFLHLDLSHLFVNMLMLVLIGGEIERFIGTARFVV-------AWVVGTLASS 112
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVII 187
+ M D T + A+L + I R+S D+ AP I L+++
Sbjct: 113 AAVLAMAFD-TPTAGASGALFALLAVLVAIAYRRSSDLR------------AP-IALLVL 158
Query: 188 HL----MVPNASFKGHLSGILVGL 207
++ + P S GHL G+ G+
Sbjct: 159 NVAFTFIAPGVSVWGHLGGLAAGI 182
>gi|452822089|gb|EME29112.1| hypothetical protein isoform 2 [Galdieria sulphuraria]
Length = 196
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 87/172 (50%), Gaps = 9/172 (5%)
Query: 29 PGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYN 88
P T +I I +++++ + + W + + ++ ++ R + S L H MHL N
Sbjct: 19 PVTCLVIAICIIVWLV-ITYKGWSYYDVGCNYDCVIVDKETWRWISSTLSHISLMHLILN 77
Query: 89 MVSLIVKGRELERMFGSVQFV---VLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAI 145
M SL +E+ GS+ ++ V+++FL ST V + ++Y+ + H + +
Sbjct: 78 MYSLW-NLSWMEQRLGSLVYLTWNVVIAFL--STCVT-LFINYLQLTVFHSEQVRHVYLV 133
Query: 146 GFSAVLFSMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPNASF 196
G+SAVLF + I ++ +L+ + ++ P+I L ++ L+VP ASF
Sbjct: 134 GYSAVLFGLFVIASQHIKVARIWILDEVLISPIWIPFISLGVVTLLVPEASF 185
>gi|444307905|ref|ZP_21143612.1| rhomboid family protein [Arthrobacter sp. SJCon]
gi|443479770|gb|ELT42758.1| rhomboid family protein [Arthrobacter sp. SJCon]
Length = 214
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 31/192 (16%)
Query: 31 TLTLILIQTLLYIMNVLAQP---WDSLGIC-ISAHTILNQRDYKRLVLSALEH--GDDMH 84
T +I + +LY++ L + +LG I A Q + R++ +A H G +H
Sbjct: 2 TFGIIAVCAVLYVLQWLIPNDAIYQTLGFANIYAEPRYGQFEPWRMLTAAFLHSQGFILH 61
Query: 85 LYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCA 144
+ NM L G+ LE + G V+F+ L I SV Y++L+ + LY
Sbjct: 62 IVLNMYMLWAFGQALEPLLGRVRFLALYLVSAIGGSVGYLLLT----PLYEPGRPLYGV- 116
Query: 145 IGFSAVLF----SMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVI---IHLMVPNASFK 197
+G S +F +M ++ + D T QL W+ + I I ++P +++
Sbjct: 117 VGASGAIFGLFGAMLLVQRHRGGD-TRQL-----------WVLIAINGVIGFVIPQIAWQ 164
Query: 198 GHLSGILV-GLC 208
HL G++ GLC
Sbjct: 165 AHLGGLVAGGLC 176
>gi|318080696|ref|ZP_07988028.1| hypothetical protein SSA3_29396 [Streptomyces sp. SA3_actF]
Length = 248
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 24/146 (16%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
+ ++ RL+ +A H + H+ NM+SL G +E M G +F+ L + SV
Sbjct: 82 EGEWYRLLTAAFLHQEIWHIAVNMLSLWFLGPAIESMLGRARFLALYLIAAVGGSVA--- 138
Query: 126 LSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELV 185
SY+ N ++G S +F + +L V A P++ L+
Sbjct: 139 -SYLFAAPN-------AASLGASGAIFGLFG---------ATGILVLRVRADVRPFVALL 181
Query: 186 IIHLMV----PNASFKGHLSGILVGL 207
+I+L++ N +++ H+ G++VG+
Sbjct: 182 VINLIITFGWSNIAWQAHIGGLVVGV 207
>gi|384107096|ref|ZP_10007998.1| rhomboid family protein [Rhodococcus imtechensis RKJ300]
gi|383833031|gb|EID72500.1| rhomboid family protein [Rhodococcus imtechensis RKJ300]
Length = 305
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 64/146 (43%), Gaps = 21/146 (14%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQF--VVLVSFLIISTSVCYVMLSY 128
R++ S H +HL NM +L V GR+ E + G ++ V VS L S +V L
Sbjct: 132 RVLGSGFLHFGIIHLAVNMFALWVIGRDTELVLGRARYACVYFVSLLGGSAAVMLFQLGA 191
Query: 129 VIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIH 188
V + V L +G AV+ +R R+SP SV AV VII
Sbjct: 192 VTAGASGAVFGL----MGAQAVIL----LRLRRSPAPV-----ISVIAVN------VIIS 232
Query: 189 LMVPNASFKGHLSGILVGLCYTETSL 214
+ +P S GHL G++ G T L
Sbjct: 233 ITIPGISLWGHLGGLVAGAAATAGIL 258
>gi|432333562|ref|ZP_19585328.1| rhomboid family protein [Rhodococcus wratislaviensis IFP 2016]
gi|430779509|gb|ELB94666.1| rhomboid family protein [Rhodococcus wratislaviensis IFP 2016]
Length = 249
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 64/146 (43%), Gaps = 21/146 (14%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQF--VVLVSFLIISTSVCYVMLSY 128
R++ S H +HL NM +L V GR+ E + G ++ V VS L S +V L
Sbjct: 76 RVLGSGFLHFGIIHLAVNMFALWVIGRDTELVLGRARYACVYFVSLLGGSAAVMLFQLGA 135
Query: 129 VIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIH 188
V + V L +G AV+ +R R+SP SV AV VII
Sbjct: 136 VTAGASGAVFGL----MGAQAVIL----LRLRRSPAPV-----ISVIAVN------VIIS 176
Query: 189 LMVPNASFKGHLSGILVGLCYTETSL 214
+ +P S GHL G++ G T L
Sbjct: 177 ITIPGISLWGHLGGLVAGAAATAGIL 202
>gi|377572160|ref|ZP_09801257.1| hypothetical protein GOTRE_152_00160 [Gordonia terrae NBRC 100016]
gi|377530656|dbj|GAB46422.1| hypothetical protein GOTRE_152_00160 [Gordonia terrae NBRC 100016]
Length = 237
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 26/193 (13%)
Query: 28 PPGTLTLILIQTLLYIMNVL-AQPWDSLGICI-SAHTILNQ----RDYKRLVLSALEHGD 81
P T LI + L++ + VL A D G I SA +L +Y RL+ + H
Sbjct: 11 PYATYALIAVNLLIFALCVLQAGVGDPGGASIFSAGDLLKSDVAAGEYWRLLTAGFLHFS 70
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
MH+ NM+SL + GR+LE G +++ + ++ S + L +D
Sbjct: 71 VMHVAVNMLSLYILGRDLELALGIGRYLAVYVIALLGGSAA-------VMLFENDRALTA 123
Query: 142 QCAIGFSAVLFSMKTI--RTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGH 199
+ ++ +M I + R SP ++ F+ V++ +P S GH
Sbjct: 124 GASGAIYGLMGAMLVIILKARVSPVPVLLIIGFN-----------VVLSFSLPGISVLGH 172
Query: 200 LSGILVGLCYTET 212
L G++ G T
Sbjct: 173 LGGLVFGAAATAA 185
>gi|333025703|ref|ZP_08453767.1| putative rhomboid family protein [Streptomyces sp. Tu6071]
gi|332745555|gb|EGJ75996.1| putative rhomboid family protein [Streptomyces sp. Tu6071]
Length = 341
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 24/146 (16%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
+ ++ RL+ +A H + H+ NM+SL G +E M G +F+ L + SV
Sbjct: 175 EGEWYRLLTAAFLHQEIWHIAVNMLSLWFLGPAIESMLGRARFLALYLIAAVGGSVA--- 231
Query: 126 LSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELV 185
SY+ N ++G S +F + +L V A P++ L+
Sbjct: 232 -SYLFAAPN-------AASLGASGAIFGLFG---------ATGILVLRVRADVRPFVALL 274
Query: 186 IIHLMV----PNASFKGHLSGILVGL 207
+I+L++ N +++ H+ G++VG+
Sbjct: 275 VINLIITFGWSNIAWQAHIGGLVVGV 300
>gi|347755936|ref|YP_004863500.1| hypothetical protein [Candidatus Chloracidobacterium thermophilum
B]
gi|347588454|gb|AEP12984.1| putative membrane protein [Candidatus Chloracidobacterium
thermophilum B]
Length = 424
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 15/158 (9%)
Query: 53 SLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLV 112
+ G C +++Q + RLV+ H +HL NM +L V G +LE ++GS +F +L
Sbjct: 89 AFGAC--NRKLIDQGEVWRLVVPMFLHIGMIHLLANMYALWVLGPQLESLYGSARFTILY 146
Query: 113 SFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNF 172
I V ++ + L+ F A+L + R + P + +
Sbjct: 147 LLSGIGGFVASYFFAHPESIGAGASGALFGM---FGALLVFVYKYRA-EIPPMVRATMQR 202
Query: 173 SVPAVYAPWIELVI---IHLMVPNASFKGHLSGILVGL 207
V W+ L+I I +P S GH+ G+L G+
Sbjct: 203 GV------WLTLIINLVITFSIPFISRSGHVGGLLTGI 234
>gi|238061764|ref|ZP_04606473.1| rhomboid family protein [Micromonospora sp. ATCC 39149]
gi|237883575|gb|EEP72403.1| rhomboid family protein [Micromonospora sp. ATCC 39149]
Length = 303
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 68/173 (39%), Gaps = 23/173 (13%)
Query: 59 SAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIIS 118
S H I+ Q ++ RLV + H +HL NM +L V GR LE G ++F+ L
Sbjct: 130 SVHGIV-QGEWYRLVTAMFLHYGVVHLLLNMWALWVLGRSLEANLGPLRFLALYLIAGFG 188
Query: 119 TSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVY 178
+V +Y+ N G A L I R D++ L + V+
Sbjct: 189 GNVA----AYLFSAENATTAGASTAIFGLFAALI---VIERRMGRDISSVLPVLVINLVF 241
Query: 179 APWIELVIIHLMVPNASFKGHLSGILVG------LCYTETSLGRLVERSGRSV 225
L VP S GHL G++ G L Y S L + +G ++
Sbjct: 242 T---------LTVPGISIPGHLGGLVTGGAMALMLAYAPRSRRTLFQAAGGTI 285
>gi|380300997|ref|ZP_09850690.1| membrane protein [Brachybacterium squillarum M-6-3]
Length = 310
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 23/139 (16%)
Query: 79 HGDDMHLYYNMVSLIVKGRELERMFGSVQF--VVLVSFLIISTSVCYVMLSYVIYLMNHD 136
HG MHL NM +L + G+ LE+ G V+F + L S L T+ V+ +
Sbjct: 138 HGGVMHLLLNMYALWIIGQYLEKTLGHVRFAAIYLTSILAGHTA--------VMLFTDAT 189
Query: 137 VTELYQCAIGFSAVLFSMKT---IRTRQSPDVTHQLLNFSVPAVYAPWIEL-VIIHLMVP 192
Y +G S +F + I R+ T Q+ A I L ++I + P
Sbjct: 190 SQAWYSGTLGASGGIFGLFAALFIVNRRLGGQTAQV---------AVLIGLNLVITFLFP 240
Query: 193 NASFKGHLSGILVGLCYTE 211
N S++GHL G+++G T
Sbjct: 241 NISWQGHLGGLVMGAALTA 259
>gi|417780433|ref|ZP_12428195.1| peptidase, S54 family [Leptospira weilii str. 2006001853]
gi|410779475|gb|EKR64091.1| peptidase, S54 family [Leptospira weilii str. 2006001853]
Length = 197
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 58 ISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLII 117
++ + + ++Y L+ S H D MHL +NM+S G+ LE G ++F++ I+
Sbjct: 29 LTPYRLKRNKNYHTLLTSGFIHADWMHLIFNMISFYSFGKNLEMTVGPIKFLLFYLGTIL 88
Query: 118 STSV 121
TSV
Sbjct: 89 ITSV 92
>gi|359727457|ref|ZP_09266153.1| intramembrane protease [Leptospira weilii str. 2006001855]
Length = 197
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 58 ISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLII 117
++ + + ++Y L+ S H D MHL +NM+S G+ LE G ++F++ I+
Sbjct: 29 LTPYRLKRNKNYHTLLTSGFIHADWMHLIFNMISFYSFGKNLEMTVGPIKFLLFYLGTIL 88
Query: 118 STSV 121
TSV
Sbjct: 89 ITSV 92
>gi|354603563|ref|ZP_09021561.1| hypothetical protein HMPREF9450_00476 [Alistipes indistinctus YIT
12060]
gi|353348943|gb|EHB93210.1| hypothetical protein HMPREF9450_00476 [Alistipes indistinctus YIT
12060]
Length = 204
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 40/187 (21%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFL 115
+ + + +++ R + R++ HGD +HL NM L+ G+ +ER FG+ Q + LVS
Sbjct: 26 LSLVPYRVVHDRQWWRVITHGFVHGDYVHLAVNMFVLLSFGQFIERFFGAYQQIGLVS-- 83
Query: 116 IISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP 175
+ + Y++L Y +Y IR R +P + +V
Sbjct: 84 --NGDLWYLLL----YFGGMVAASVYDL-------------IRYRNNPRYASIGASGAVS 124
Query: 176 AV------YAPWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRVV 229
AV + PW ++ ++ ++P + GI+ GL Y S GR +
Sbjct: 125 AVVFASIFFNPWSKIYLLG-VIP-------IPGIIFGLLYIGYS-----SYMGRHQGDRI 171
Query: 230 NTLTNVF 236
N ++F
Sbjct: 172 NHFAHLF 178
>gi|444918952|ref|ZP_21239006.1| rhomboid family protein [Cystobacter fuscus DSM 2262]
gi|444709235|gb|ELW50258.1| rhomboid family protein [Cystobacter fuscus DSM 2262]
Length = 205
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 20/145 (13%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
++ Y R++ L HG +HL +NM G ER GS +F++L + +S
Sbjct: 42 LVQDGQYWRVLGCILTHGGPLHLAFNMWVAYSLGTPFERAIGSGRFLLLSLIAALGSSAF 101
Query: 123 YVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWI 182
++ ++ + + L G+ + T R+ + F W+
Sbjct: 102 ALLFNFKVVTVGASGMIL-----GYGGAMLVTATREFRRG-------IIF--------WL 141
Query: 183 ELVIIHLMVPNASFKGHLSGILVGL 207
V + ++P S+ GHL G L GL
Sbjct: 142 AQVAVLSLIPGVSWAGHLGGFLFGL 166
>gi|260439384|ref|ZP_05793200.1| rhomboid family protein [Butyrivibrio crossotus DSM 2876]
gi|292808180|gb|EFF67385.1| rhomboid family protein [Butyrivibrio crossotus DSM 2876]
Length = 337
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 33/169 (19%)
Query: 60 AHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVV--LVSFLII 117
A +++ ++Y RL S H HL NM+ L+ G +ER+ G V++ + L L
Sbjct: 184 AKYVIDYKEYYRLFTSMFLHAGVQHLASNMIMLLFVGDTIERIVGHVRYAIIYLAGGLFA 243
Query: 118 STSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTI--------RTRQSPDVTHQL 169
S L+ + ++Y C IG S +F++ R R ++
Sbjct: 244 SVGT----------LLYYRTYDMYACCIGASGAIFAVMGALIYILICNRGRTEGFSIVRI 293
Query: 170 LNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGL-----CYTETS 213
+ F A+Y+ L H++G+L GL CY +
Sbjct: 294 ILFVAYAIYSG--------LTTQGTCNAAHIAGLLGGLLITAICYRKKG 334
>gi|359419226|ref|ZP_09211185.1| putative rhomboid family protein [Gordonia araii NBRC 100433]
gi|358244841|dbj|GAB09254.1| putative rhomboid family protein [Gordonia araii NBRC 100433]
Length = 218
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 20/151 (13%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
+Y RL+ S H MH+ NM+SL++ G +E + G+ +F+++ + S +
Sbjct: 39 NHEYWRLLTSGFLHLSIMHIAVNMISLVLLGTIIEPILGTARFLLVYLVALFGGSAAVTL 98
Query: 126 LSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPA--VYAPWIE 183
LS + T AI ++ +M I +L F PA V A
Sbjct: 99 LSG-----TNTATAGASGAI--YGLMGAMLVI-----------VLKFKAPAGQVIAIIAV 140
Query: 184 LVIIHLMVPNASFKGHLSGILVGLCYTETSL 214
+ I + VP S GHL G+L G T +L
Sbjct: 141 NIFISISVPGISLVGHLGGLLFGTLATVAAL 171
>gi|327349312|gb|EGE78169.1| rhomboid protein 2 [Ajellomyces dermatitidis ATCC 18188]
Length = 275
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL-VSFLIISTSVCYVMLSYV 129
RL + H H ++N+V+L E G++ V L V L + Y++ V
Sbjct: 65 RLNTYPIIHNGLFHTFWNIVALTPLLERFEAEHGTLTSVALFVGPLSTLPAGLYLLFEKV 124
Query: 130 IYLMNHDVTELYQCAIGFSAVLF---SMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVI 186
I N V +G S +F ++ I+T Q+ + + + +P P + +++
Sbjct: 125 ILRGNTAV-------LGSSVWIFLLLGIEAIKTFQT-NPHFVIGTYRIPTWTTPLLLVIL 176
Query: 187 IHLMVPNASFKGHLSGILVGLCYTETSLG 215
+ +VPN S GHLSG+ VG Y + +G
Sbjct: 177 VFALVPNTSLLGHLSGLAVGYVYMKNEVG 205
>gi|269793370|ref|YP_003312825.1| hypothetical protein Sked_00140 [Sanguibacter keddieii DSM 10542]
gi|269095555|gb|ACZ19991.1| uncharacterized membrane protein [Sanguibacter keddieii DSM 10542]
Length = 286
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 75/181 (41%), Gaps = 21/181 (11%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDM-HLYYNM 89
T T+I + Y++ LA W ++ L + + R V +A H H+ NM
Sbjct: 81 TWTIIGLCLASYVLQ-LAMGWGGWTSRLAFSPALGEIEPWRFVTAAFVHSTSFFHIALNM 139
Query: 90 VSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSA 149
+L + G LE + G V+F L I V V+L+ + + +G S
Sbjct: 140 YALWIVGPYLENLLGRVRFTALYLLSAIGGQVAVVLLA------DPSGASWFTGTVGASG 193
Query: 150 VLFSMKT---IRTRQSPDVTHQLLNFSVPAVYAPWIEL-VIIHLMVPNASFKGHLSGILV 205
+F + + R+ +L I L +++ +VPN S++GHL G++
Sbjct: 194 AVFGLFGAIFVVMRKMGQEARGMLVI---------IGLNLVVGFVVPNISWQGHLGGLVT 244
Query: 206 G 206
G
Sbjct: 245 G 245
>gi|116668581|ref|YP_829514.1| rhomboid family protein [Arthrobacter sp. FB24]
gi|116608690|gb|ABK01414.1| Rhomboid family protein [Arthrobacter sp. FB24]
Length = 293
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 85/190 (44%), Gaps = 32/190 (16%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYK-----RLVLSALEH--GDDM 83
T +I + L+Y++ + P D + + T+ +Y R++ SA H G +
Sbjct: 80 TFGIIAVCALVYVLQWIV-PNDGIYQNFAFATVYATPEYGVFEPWRMLTSAFLHSQGFIL 138
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC 143
H+ NM L + G+ LE + G ++F+ L + SV Y++L+ ++ +
Sbjct: 139 HIVLNMYMLWMFGQALEPLLGRIRFLALYLLAAVGGSVGYLLLT-----PSYTPGQQLAG 193
Query: 144 AIGFSAVLF----SMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVI---IHLMVPNASF 196
+G S +F +M ++ + D T QL W+ + I I +VP ++
Sbjct: 194 VVGASGAIFGLFGAMLVVQRHRGGD-TKQL-----------WVLIAINGVIGFIVPQIAW 241
Query: 197 KGHLSGILVG 206
+ HL G++ G
Sbjct: 242 QAHLGGLVTG 251
>gi|163815124|ref|ZP_02206505.1| hypothetical protein COPEUT_01280 [Coprococcus eutactus ATCC 27759]
gi|158449533|gb|EDP26528.1| peptidase, S54 family [Coprococcus eutactus ATCC 27759]
Length = 333
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 15/132 (11%)
Query: 24 FHLIPPGTLTLILIQTLLYIMNV-LAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDD 82
F ++ P +L+ L+Y+ V + QP + + ++ + I +R Y R + S H
Sbjct: 144 FGVVTP---IFLLMNILVYLACVYIYQPTE---LAVNVYAISEKRQYYRFLTSMFTHFGI 197
Query: 83 MHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQ 142
HL NMV LI G +E + G + +V++ I T + SY+ + N ++Y
Sbjct: 198 THLLGNMVILIALGARIENIIGRLNYVIVY----IVTGLAAAFASYINFFCN----DIYD 249
Query: 143 CAIGFSAVLFSM 154
+ G S +F +
Sbjct: 250 YSAGASGAIFGL 261
>gi|318057482|ref|ZP_07976205.1| hypothetical protein SSA3_06048 [Streptomyces sp. SA3_actG]
Length = 341
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 24/146 (16%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
+ ++ RL+ +A H + H+ NM+SL G +E M G +F+ L + SV
Sbjct: 175 EGEWYRLLTAAFLHQEIWHIAVNMLSLWFLGPAIESMLGRARFLALYLIAAVGGSVA--- 231
Query: 126 LSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELV 185
SY+ N ++G S +F + +L V A P++ L+
Sbjct: 232 -SYLFAAPN-------AASLGASGAIFGLFG---------ATGILVLRVRADVRPFVALL 274
Query: 186 IIHLMV----PNASFKGHLSGILVGL 207
+I+L++ N +++ H+ G++VG+
Sbjct: 275 VINLIITFGWSNIAWQAHIGGLVVGV 300
>gi|256831415|ref|YP_003160142.1| rhomboid family protein [Jonesia denitrificans DSM 20603]
gi|256684946|gb|ACV07839.1| Rhomboid family protein [Jonesia denitrificans DSM 20603]
Length = 292
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 23/144 (15%)
Query: 71 RLVLSALEHGDD--MHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
R V +AL H H+ +NM +L V G +LE + G +F+ L I V V+L+
Sbjct: 120 RFVTAALLHSTTRYFHILFNMWALWVVGSQLELILGRARFITLYVLSAIGGHVAVVLLA- 178
Query: 129 VIYLMNHDVTE-LYQCAIGFSAVLF----SMKTIRTRQSPDVTHQLLNFSVPAVYAPWIE 183
V E + +G S +F ++ + R D+ + +
Sbjct: 179 ------SPVNESWFIPTLGASGAVFGLFGALVPVMKRVGADLRGIAVLIGIN-------- 224
Query: 184 LVIIHLMVPNASFKGHLSGILVGL 207
V++ +VPN S++GHL G+L G+
Sbjct: 225 -VVLGFIVPNISWQGHLGGLLTGV 247
>gi|354477575|ref|XP_003500995.1| PREDICTED: rhomboid domain-containing protein 2-like [Cricetulus
griseus]
Length = 306
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 21/137 (15%)
Query: 85 LYYNMVSLIVKG-------RELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDV 137
+Y N +SL+ ER G+V+ F +I + + S +IYL V
Sbjct: 14 VYENPISLLCGAIIIWRFAGNFERTVGTVRHCF---FTLI-----FTIFSAIIYLSFESV 65
Query: 138 TELYQC-----AIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVP 192
+ L + A GF+ V F+M + + +S + VP+V PW+ L+ ++P
Sbjct: 66 SSLSKLGEVEDARGFTPVAFAMLGVTSVRSRMRRALVFGVVVPSVLVPWL-LLCASWLIP 124
Query: 193 NASFKGHLSGILVGLCY 209
SF ++SG+L+GL Y
Sbjct: 125 QTSFLSNVSGLLIGLSY 141
>gi|255326467|ref|ZP_05367549.1| rhomboid family protein [Rothia mucilaginosa ATCC 25296]
gi|255296507|gb|EET75842.1| rhomboid family protein [Rothia mucilaginosa ATCC 25296]
Length = 270
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 74/184 (40%), Gaps = 29/184 (15%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEH--GDDMHLYYN 88
T TLILI ++Y + ++ + + + ++ +Y RL+ H D MH+ +N
Sbjct: 76 TYTLILINVVVYGLQLIIPFRWMYNLGMMSGPRVHHGEYYRLITHGFVHSQNDPMHMVWN 135
Query: 89 MVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFS 148
M+ L + G LERM G +F+ + + + + Y Y+ A+G S
Sbjct: 136 MIYLFIFGVSLERMMGRWKFLFVYMAATLGAGLSVYLFDY------------YRGAVGAS 183
Query: 149 AVLFSMKT------IRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSG 202
++ + + RQ +L + V + L PN S GH G
Sbjct: 184 GGVYGLYGAFFVILLLRRQKDTARLFMLLIGIGVVQS---------LFHPNISHAGHFGG 234
Query: 203 ILVG 206
++ G
Sbjct: 235 LVSG 238
>gi|256425736|ref|YP_003126389.1| rhomboid family protein [Chitinophaga pinensis DSM 2588]
gi|256040644|gb|ACU64188.1| Rhomboid family protein [Chitinophaga pinensis DSM 2588]
Length = 280
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL 111
IL ++DYKRL+ S H MHL++NMVSL + LE G ++ L
Sbjct: 39 ILIEKDYKRLITSGFLHVSWMHLFFNMVSLFLFSNSLEVKLGPTAYLTL 87
>gi|344289781|ref|XP_003416619.1| PREDICTED: rhomboid domain-containing protein 2 [Loxodonta
africana]
Length = 367
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 85 LYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC- 143
+Y N VSL+ + R GS + V T V + ++S +IYL V+ L +
Sbjct: 72 VYENPVSLLCGAVIIWRFAGSFERSVGTVRHCFFTLV-FTVISAIIYLSFEAVSSLTKLG 130
Query: 144 ----AIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGH 199
A GF+ V F+M + + +S + VP+V PW+ L+ I ++P SF +
Sbjct: 131 EVEDARGFTPVAFAMLGVSSVRSRMRRALVFGVVVPSVLVPWL-LLGISWLIPQTSFLSN 189
Query: 200 LSGILVGLCYTET 212
+ G+++GL Y T
Sbjct: 190 VCGLVIGLTYGVT 202
>gi|300123463|emb|CBK24735.2| Peptidase S54 [Blastocystis hominis]
Length = 398
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 90/195 (46%), Gaps = 35/195 (17%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMV 90
T+ + LI L+ NV D+ + +S +++ + + R++ ++ H D +H+
Sbjct: 121 TVVIALIFFWLWDKNV-----DATEVAVSYSSVMEKGEVWRVITASFSHLDLLHV----- 170
Query: 91 SLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAV 150
G L ++ F + + +L++ T ++ L ++ MN + + +G+S V
Sbjct: 171 -----GLNLTACHIAIIFSINL-WLVVMTQAVHLFLVWLADKMNLEHGKSVW-GLGYSCV 223
Query: 151 LFSMKTIRTRQS-------------PDVTHQLLNFSVPAV-----YAPWIELVIIHLMVP 192
LF++ T + P +LL F P++ LV++ L+VP
Sbjct: 224 LFALMTTIILKGDTQCPVNLYGMCFPTYEFKLLPFPSTCTGIRINLYPFVLLVVMKLIVP 283
Query: 193 NASFKGHLSGILVGL 207
+SF GHL+GILVG+
Sbjct: 284 ISSFFGHLAGILVGI 298
>gi|410867339|ref|YP_006981950.1| Peptidase, S54 family protein [Propionibacterium acidipropionici
ATCC 4875]
gi|410823980|gb|AFV90595.1| Peptidase, S54 family protein [Propionibacterium acidipropionici
ATCC 4875]
Length = 229
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 9/180 (5%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDM-HLY 86
P T TLI + L++ + LA P I +SA + + R + SA H ++ H+
Sbjct: 10 PVVTWTLIGVCVLIW-LGELAIPGFINTIALSAAA--GKTEPWRFLTSAFAHSTNITHIG 66
Query: 87 YNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIG 146
+NM +L GR LER G +F+ ++ +V+++ + + Y +G
Sbjct: 67 FNMFALWSLGRVLERFLGRGRFLATYLLSALAGGALFVVMAAGTEYGSAVIPGWYDGVVG 126
Query: 147 FSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
S +F + + V + L S +++ I V + +P+ +++ H+ G +VG
Sbjct: 127 ASGAIFGLF-----GTLLVVQRRLGGSTRSLWMVLILNVALVFFIPDIAWQAHVGGFIVG 181
>gi|415722834|ref|ZP_11469227.1| rhomboid family membrane protein [Gardnerella vaginalis
00703C2mash]
gi|388064306|gb|EIK86863.1| rhomboid family membrane protein [Gardnerella vaginalis
00703C2mash]
Length = 233
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 75 SALEHGDDM-HLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLM 133
S H ++ H+ +NM+ L G ELER FG +F L + I C L Y L
Sbjct: 70 SMFVHAPELTHILFNMICLYSLGVELERFFGKWKFFFL--YAISGLGGCVATLLYS-KLT 126
Query: 134 NHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVI-IHLMVP 192
V Y + ++ ++ + R V L+ WI L + + L+VP
Sbjct: 127 QDWVIAAYGASGAIMGLIGALLVAQWRLGESVNGTLI----------WIGLTLAMPLLVP 176
Query: 193 NASFKGHLSGILVGL 207
N +++ H+ GI+ G+
Sbjct: 177 NIAWQAHIGGIVTGI 191
>gi|381208752|ref|ZP_09915823.1| hypothetical protein LGrbi_02305 [Lentibacillus sp. Grbi]
Length = 252
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 29 PGTLTLILIQTLLYIM-NVLAQPWDSL----GICISAHTILNQRDYKRLVLSALEHGDDM 83
P LI+IQ +L+++ L P +L G+ I+ ++Q Y RL+ S H M
Sbjct: 17 PVVAWLIIIQLVLWLLTGFLHTPLGNLIRDWGMGINFA--ISQGQYWRLITSIFLHAGLM 74
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFV 109
H+ +N +L++ G LE+M G V+F+
Sbjct: 75 HVLFNSFALVLFGPALEQMLGKVKFI 100
>gi|373955987|ref|ZP_09615947.1| Rhomboid family protein [Mucilaginibacter paludis DSM 18603]
gi|373892587|gb|EHQ28484.1| Rhomboid family protein [Mucilaginibacter paludis DSM 18603]
Length = 288
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 84/183 (45%), Gaps = 16/183 (8%)
Query: 79 HGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVT 138
HG +HL +NM+ G+ E G + + L ++ ++ YV+ +Y ++ + +V
Sbjct: 80 HGGILHLLFNMLWFFWIGQIFEEYLGGKKLITLYILGGLAGALVYVV-AYNVFPLFTEVK 138
Query: 139 ELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELV-----IIHLMVPN 193
E +G +A + ++ PD T ++ F AV W+ +V ++ ++ PN
Sbjct: 139 ETANT-VGATASVMAVIVGTATLLPDYTISMMFFG--AVKLKWLAIVYILFDLLSIVGPN 195
Query: 194 ASFK-GHLSGILVGLCYTET-----SLGRLVERSGRSVSRVVNTLTNVFKLDDDCNGDDE 247
A + HL G L+G Y + G +E+ + S++ + N+ K + + +E
Sbjct: 196 AGGEFAHLGGALLGFIYIKQLRNGHDWGGSIEKVLQPKSKLKIAVKNLSK-NTNTKPREE 254
Query: 248 DSD 250
+ D
Sbjct: 255 EVD 257
>gi|257054112|ref|YP_003131944.1| membrane protein [Saccharomonospora viridis DSM 43017]
gi|256583984|gb|ACU95117.1| uncharacterized membrane protein [Saccharomonospora viridis DSM
43017]
Length = 336
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 16/139 (11%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
++ RL+ S H +HL NM++L V GR+LE + G ++F+ + + + +V +
Sbjct: 160 EWWRLLASGFLHYGLLHLAMNMLALWVLGRDLELLLGRIRFLAVYFLSMFAGAVAVFVFG 219
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVII 187
+Y AVL ++ +R + + +LN ++I
Sbjct: 220 AADTATAGASGAIYGL---MGAVLVAVLRLRLNATAAIGIIVLN-------------IVI 263
Query: 188 HLMVPNASFKGHLSGILVG 206
+ +P S GHL G++ G
Sbjct: 264 SVSLPGISLLGHLGGLVAG 282
>gi|393782838|ref|ZP_10371020.1| hypothetical protein HMPREF1071_01888 [Bacteroides salyersiae
CL02T12C01]
gi|392672223|gb|EIY65693.1| hypothetical protein HMPREF1071_01888 [Bacteroides salyersiae
CL02T12C01]
Length = 225
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 11/145 (7%)
Query: 26 LIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILN---QRDYK--RLVLSALEHG 80
++P T LI+I L Y+ ++AQ S GI ++ + L+ D+ +L+ HG
Sbjct: 1 MMPTVTKNLIIINVLFYLGTIVAQ---SYGIDLANYLGLHFFMAEDFNPAQLITYMFMHG 57
Query: 81 DDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIY---LMNHDV 137
HL++NM ++ + GR LE+++G +F+ I + ++ +V Y L + +
Sbjct: 58 GFTHLFFNMFAVWMFGRILEQVWGPKRFLFYYILCGIGAGIIQEIVQFVEYQTVLSGYSM 117
Query: 138 TELYQCAIGFSAVLFSMKTIRTRQS 162
+ + I S L M T+ +
Sbjct: 118 VQTFSGTIPMSEYLNMMNTVGASGA 142
>gi|334564482|ref|ZP_08517473.1| hypothetical protein CbovD2_07894 [Corynebacterium bovis DSM 20582]
Length = 198
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 25/143 (17%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
+ RL SAL H H+ NM+ + + GR+LER +GSV V + + SV V++
Sbjct: 59 GWWRLATSALVHLGVTHIVLNMLLIGLVGRDLERSYGSVVVAVGMLLTAVGGSVGSVLM- 117
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVII 187
+ Y G S + + M + +S L P + L+I+
Sbjct: 118 -----------DPYTAMGGASTIGYGMFAMLVARSASRREDL--------RGP-VTLIIV 157
Query: 188 HLMV----PNASFKGHLSGILVG 206
+L+ P S GH+ G++VG
Sbjct: 158 NLVFTLASPGVSLWGHIGGLVVG 180
>gi|238922477|ref|YP_002935990.1| hypothetical protein EUBREC_0051 [Eubacterium rectale ATCC 33656]
gi|238874149|gb|ACR73856.1| hypothetical protein EUBREC_0051 [Eubacterium rectale ATCC 33656]
Length = 192
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
Y RL S H MH+ NMV L G+ +E+ G V+ +L++FL+ + +C +LS
Sbjct: 43 QYWRLFTSMFMHFGLMHILNNMVVLGAVGQIVEKAMGHVK--LLITFLV--SGMCGSVLS 98
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSM 154
Y++ L N+D Y + G S +F +
Sbjct: 99 YIVMLYNND----YAVSAGASGAIFGL 121
>gi|293193637|ref|ZP_06609859.1| rhomboid family protein [Actinomyces odontolyticus F0309]
gi|292819869|gb|EFF78872.1| rhomboid family protein [Actinomyces odontolyticus F0309]
Length = 292
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 22/184 (11%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMV 90
T ++ I L+Y++ +LA P L + + ++ ++ A HG MH+ +NM+
Sbjct: 77 TYAMMAICVLMYVVTLLA-PTTKLSLALVPAWLMAHP--WTVLTGAFLHGGIMHILFNML 133
Query: 91 SLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAV 150
SL GR +E + G +F+ L +L+ + +L + + +E++ +G S
Sbjct: 134 SLYWVGRAIEPVLGRWRFLTL--YLVSALGGSAFILVWCLI----QPSEIFVSTVGASGA 187
Query: 151 LFSM----KTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
+F + ++ D T L + VY MV S++GH+ G + G
Sbjct: 188 VFGLFGAVFVLQRLGGSDTTAILTLLGINLVYG---------FMVSGISWQGHIGGAIAG 238
Query: 207 LCYT 210
+ T
Sbjct: 239 VGAT 242
>gi|403070966|ref|ZP_10912298.1| hypothetical protein ONdio_15397 [Oceanobacillus sp. Ndiop]
Length = 253
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 18/108 (16%)
Query: 29 PGTLTLILIQTLLY-IMNVLAQP-------WDSLGICISAHTILNQRDYKRLVLSALEHG 80
P L++I +L+ ++N L P W + ++ ++ +Y RLV HG
Sbjct: 17 PVVSVLVIINLILWFVVNFLGLPIGREIYYWG-----VGSNFMVAAGEYWRLVTPIFLHG 71
Query: 81 DDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFL---IISTSVCYVM 125
D MH +N SL++ G LE+M G +F L++F II+ + Y+
Sbjct: 72 DLMHALFNSFSLVLFGPALEQMLGKSKF--LIAFFGAGIIANAATYLF 117
>gi|406603411|emb|CCH45089.1| Rhomboid protein 2 [Wickerhamomyces ciferrii]
Length = 369
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 172 FSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERS 221
+S+P ++ P+ L++I +++P +SF GHL G++ G LG+L S
Sbjct: 242 YSLPTIFTPFGPLILISIILPGSSFFGHLFGLIAGYALAFGYLGKLAPPS 291
>gi|227831853|ref|YP_002833560.1| Rhomboid protease glpG [Corynebacterium aurimucosum ATCC 700975]
gi|262183117|ref|ZP_06042538.1| Rhomboid protease glpG [Corynebacterium aurimucosum ATCC 700975]
gi|227452869|gb|ACP31622.1| Rhomboid protease glpG [Corynebacterium aurimucosum ATCC 700975]
Length = 214
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 42 YIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELER 101
Y ++LAQ W G +S H ++ + H D HL NMV L GRE+ER
Sbjct: 36 YYRSMLAQDWTLWGPEVSEHP-------TTVITAGFMHLDAGHLLVNMVMLFFVGREVER 88
Query: 102 MFGSVQFVVLVSFLIISTSVCYVMLSY 128
GS +VV I+ +S + + +
Sbjct: 89 ALGSALYVVAYLISIVGSSAAVLWMDF 115
>gi|162449650|ref|YP_001612017.1| hypothetical protein sce1379 [Sorangium cellulosum So ce56]
gi|161160232|emb|CAN91537.1| hypothetical protein sce1379 [Sorangium cellulosum So ce56]
Length = 565
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 65/155 (41%), Gaps = 28/155 (18%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
RL+ SA H D MHL+ NM++L G LE + G +F++L + S+ ML
Sbjct: 226 RLLASAFLHADPMHLFVNMLALWSFGPMLEALLGPRRFLLLYGASALGGSLASAMLE--- 282
Query: 131 YLMNHDVTELYQCAIGFSAVLFSMKT--IRTRQSPDVTHQLLNFSVPAVYA-----PWIE 183
+ ++G S ++ + T I P H LL PA+ A W+
Sbjct: 283 ----------DRWSVGASGAIWGLMTAGIGVALRP---HGLLP---PAMIAQMRSRAWLP 326
Query: 184 LV--IIHLMVPNASFKGHLSGILVGLCYTETSLGR 216
L +++ P HL G +VG T L R
Sbjct: 327 LGLNLVYSFQPGVDLLAHLGGGVVGFALVVTVLPR 361
>gi|407797237|ref|ZP_11144183.1| S54 family peptidase [Salimicrobium sp. MJ3]
gi|407018431|gb|EKE31157.1| S54 family peptidase [Salimicrobium sp. MJ3]
Length = 204
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 18/171 (10%)
Query: 43 IMNVLAQP----WDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRE 98
IM+V + P W LG+ + +++Q +Y RL+ H H +N +L++ G
Sbjct: 31 IMDVFSFPFAVEWKQLGV--GNNFLVSQGEYWRLLTPIFLHAGLSHTLFNSFTLVLFGPA 88
Query: 99 LERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIR 158
LERM G V+F++ I+ ++ Y + + +G S +F + I
Sbjct: 89 LERMLGKVKFIIAYLLAGIAGNIG-------TYAADPGA---FHSHLGASGAIFGLFGIY 138
Query: 159 TRQSPDVTHQLLNFSVPAVYAPWIEL-VIIHLMVPNASFKGHLSGILVGLC 208
LL+ + + +I L +I+ + PN + GHL G + GL
Sbjct: 139 AYML-FARKDLLDQASSQIIGVFIVLGLIMTFLQPNINVLGHLFGFIGGLA 188
>gi|242035691|ref|XP_002465240.1| hypothetical protein SORBIDRAFT_01g034860 [Sorghum bicolor]
gi|241919094|gb|EER92238.1| hypothetical protein SORBIDRAFT_01g034860 [Sorghum bicolor]
Length = 321
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 88 NMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGF 147
++V L++ G+ LE ++G+ + + + + +STS C + + V+Y + + + LY GF
Sbjct: 77 SIVGLLLFGKVLEPLWGAKELLKFIFIVNLSTSACVFVTTIVLYYITQEESYLYTPVSGF 136
Query: 148 SAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMV 191
VL + + PD Q LN V + A WI ++ + V
Sbjct: 137 YGVLSGLLVGIKQILPD---QELNLLVLKISAKWIPSIVAFISV 177
>gi|268317852|ref|YP_003291571.1| rhomboid family protein [Rhodothermus marinus DSM 4252]
gi|345304133|ref|YP_004826035.1| Rhomboid family protein [Rhodothermus marinus SG0.5JP17-172]
gi|262335386|gb|ACY49183.1| Rhomboid family protein [Rhodothermus marinus DSM 4252]
gi|345113366|gb|AEN74198.1| Rhomboid family protein [Rhodothermus marinus SG0.5JP17-172]
Length = 203
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL 111
IL R+Y R++ + H HL +NM++L GR +E + G V+F+++
Sbjct: 40 ILRGREYHRMITAGFVHVGWAHLAFNMITLFFFGRPMEVLMGPVRFLLI 88
>gi|119358499|ref|YP_913143.1| rhomboid family protein [Chlorobium phaeobacteroides DSM 266]
gi|119355848|gb|ABL66719.1| Rhomboid family protein [Chlorobium phaeobacteroides DSM 266]
Length = 278
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 23 GFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTIL---NQRDYKRLVLSALE- 78
GF +IPP +IL +++ LG I+A+ L N + L +
Sbjct: 12 GFQVIPPAIKLIILANVAIFLFQT-----SGLGAFITAYGALWPINSHNDTGLSFQIWQP 66
Query: 79 ------HGDDMHLYYNMVSLIVKGRELERMFGSVQFVV 110
HG HL++NM +L + G E+E +G+ QF +
Sbjct: 67 VTYMFLHGSMGHLFFNMFALWIFGTEIENYWGTRQFTI 104
>gi|389792719|ref|ZP_10195903.1| hypothetical protein UU9_01024 [Rhodanobacter fulvus Jip2]
gi|388435906|gb|EIL92795.1| hypothetical protein UU9_01024 [Rhodanobacter fulvus Jip2]
Length = 201
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 62 TILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMF----GSVQFVVL 111
I QR+Y RLV L H D HL +NM +L GR +E F GS FV+
Sbjct: 34 AIARQREYYRLVTYGLVHADFGHLLFNMFTLFFFGRVMEGFFAQRLGSFGFVLF 87
>gi|71051311|gb|AAH98493.1| Rhbdd2 protein, partial [Mus musculus]
Length = 274
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 98 ELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-----AIGFSAVLF 152
ER G+V+ F +I + + S +IYL V+ L + A GF+ V F
Sbjct: 2 NFERTVGTVRHCF---FTLI-----FTVFSAIIYLSFESVSSLSKLGEVEDARGFTPVAF 53
Query: 153 SMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
+M + + +S + VP+V PW+ L+ ++P SF ++SG+L+GL Y
Sbjct: 54 AMLGVTSVRSRMRRALVFGVVVPSVLVPWL-LLCASWLIPQTSFLSNVSGLLIGLSY 109
>gi|402298151|ref|ZP_10817865.1| hypothetical protein BalcAV_04560 [Bacillus alcalophilus ATCC
27647]
gi|401726654|gb|EJS99873.1| hypothetical protein BalcAV_04560 [Bacillus alcalophilus ATCC
27647]
Length = 249
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 39 TLLYIMNVLAQPWDSL---GICISAHTI-----LNQRDYKRLVLSALEHGDDMHLYYNMV 90
T+L ++VL W +L G I H + ++ DY RLV H MH+ +N V
Sbjct: 19 TILVAIHVLIFFWINLLPGGEWIYYHGVGLNLAVHNGDYWRLVTPIFMHVGFMHVIFNSV 78
Query: 91 SLIVKGRELERMFGSVQFVVL 111
SLI+ G LE+M G +F++L
Sbjct: 79 SLILFGPPLEQMLGKFRFILL 99
>gi|323453274|gb|EGB09146.1| hypothetical protein AURANDRAFT_63657 [Aureococcus anophagefferens]
Length = 1186
Score = 41.6 bits (96), Expect = 0.39, Method: Composition-based stats.
Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 17/182 (9%)
Query: 29 PGTLTLILIQTLLYIMNVLAQPWDSLGIC--ISAHTILNQRDYKRLVLSALEHGDDMHLY 86
P L + ++ +NV+A + C + LN Y RL+ + H HL
Sbjct: 863 PVVLGFAFVCCAVFFVNVVAPGTNVFVACPPFRMASPLNPLTYLRLLTHTVGHTGYDHLK 922
Query: 87 YNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIG 146
NMV+L++ G E+ FGS+ + + ++ +S++V ++ L YQ +G
Sbjct: 923 GNMVNLLLVGPASEKEFGSMNLLKIFLYVAVSSAVAHMALG---------PANGYQ--LG 971
Query: 147 FSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWI--ELVIIHLMVPNASFKGHLSGIL 204
S V+F++ + + S L F + A W+ E+ S HLSG +
Sbjct: 972 ASGVVFALILLNSLLSAHSGVVPLTFLLTA--GLWVSDEVFRFFFARDQVSHVAHLSGAV 1029
Query: 205 VG 206
VG
Sbjct: 1030 VG 1031
>gi|304403852|ref|ZP_07385514.1| Rhomboid family protein [Paenibacillus curdlanolyticus YK9]
gi|304346830|gb|EFM12662.1| Rhomboid family protein [Paenibacillus curdlanolyticus YK9]
Length = 204
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 11/138 (7%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
R V + H MHL+YN++SLI+ LER+ G V++ I T V + S
Sbjct: 66 RYVTAIFLHAGFMHLFYNLISLIIFAPPLERLLGHVRY----GLFFIVTGVVGNLFS--- 118
Query: 131 YLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLM 190
L +H ++G S ++ + S H+L S VY+ I +I +
Sbjct: 119 ALFHHGEV----LSVGASGAIYGVYGAFLFLSVFGKHRLDEGSRKTVYSILIFGLIYSFL 174
Query: 191 VPNASFKGHLSGILVGLC 208
VP + H+ G + G
Sbjct: 175 VPTINIWAHVGGGIAGFV 192
>gi|297621662|ref|YP_003709799.1| Rhomboid family protein [Waddlia chondrophila WSU 86-1044]
gi|297376963|gb|ADI38793.1| Rhomboid family protein [Waddlia chondrophila WSU 86-1044]
gi|337292982|emb|CCB90980.1| Rhomboid family protein [Waddlia chondrophila 2032/99]
Length = 387
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 32/154 (20%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
RL L H D HL++NM+ L+V G ++E+ G + ++ F++IS ++ +
Sbjct: 237 RLFTPILLHADIFHLFFNMIWLLVLGVQMEKRLGIFRMIL---FILISAAIS----NTAQ 289
Query: 131 YLMNHDVTELYQCAIGFSAVLFSMKT---IRTRQSP-------DVTHQLLNFSVPAVYAP 180
YLM+ IGFS VL M IR + +P T ++ V A+
Sbjct: 290 YLMSGP------DFIGFSGVLCGMIVFVWIRQKNAPWEGYHLQSSTMAFISIFVGAMAG- 342
Query: 181 WIELVIIHL-------MVPNASFKGHLSGILVGL 207
I+L+ L + P + HLSG L GL
Sbjct: 343 -IQLISFALELMGQPSLAPPIANTAHLSGALAGL 375
>gi|335420156|ref|ZP_08551197.1| hypothetical protein SSPSH_05704 [Salinisphaera shabanensis E1L3A]
gi|335420944|ref|ZP_08551976.1| hypothetical protein SSPSH_09685 [Salinisphaera shabanensis E1L3A]
gi|334893514|gb|EGM31727.1| hypothetical protein SSPSH_09685 [Salinisphaera shabanensis E1L3A]
gi|334895259|gb|EGM33435.1| hypothetical protein SSPSH_05704 [Salinisphaera shabanensis E1L3A]
Length = 201
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 19/121 (15%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMF----GSVQFVVLVSFLIIST 119
+N+ +Y+RL+ H D HL +NM++L GR +E F G+V F + F ++
Sbjct: 35 VNRGEYQRLLTHGFIHADGQHLLFNMITLFFFGRVIEGFFERYIGAVGFAL---FYLVGV 91
Query: 120 SVCYVMLSYVIYLMNHDVTELYQ---CAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPA 176
V ++ SY + H Y+ + SAVLF+ I +P T + F +PA
Sbjct: 92 VVA-IVPSY----LQHRNDSRYRSLGASGAVSAVLFAYVLI----APWSTIYVFFFPIPA 142
Query: 177 V 177
+
Sbjct: 143 I 143
>gi|332526034|ref|ZP_08402172.1| integral membrane protein [Rubrivivax benzoatilyticus JA2]
gi|332109877|gb|EGJ10505.1| integral membrane protein [Rubrivivax benzoatilyticus JA2]
Length = 198
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLS-ALEHGDDMHL 85
+PP T TLILI T ++ + SL + ++ + + V+S A HG HL
Sbjct: 4 LPPVTKTLILICTAVFCLQTFVP--QSLTLWLALWPVGSGLFGPWQVVSYAFLHGGLFHL 61
Query: 86 YYNMVSLIVKGRELERMFGSVQFV 109
++NM+ L + G ELER++G +++
Sbjct: 62 FFNMLGLWMFGSELERVWGQKRYL 85
>gi|170290174|ref|YP_001736990.1| rhomboid family protein [Candidatus Korarchaeum cryptofilum OPF8]
gi|170174254|gb|ACB07307.1| Rhomboid family protein [Candidatus Korarchaeum cryptofilum OPF8]
Length = 452
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 30 GTLTLILIQTLLYIMNV-------LAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDD 82
T++LI+I +++Y+ ++ W ++G S + + + R + S H D
Sbjct: 18 ATISLIVINSIIYLATSYNNFFLSVSDYWVTVG-GFSPSLLTHTDQWYRFLTSMFLHADI 76
Query: 83 MHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTEL 140
H+++NM L GR +E GS +F+ L ++ S+ + S++ L ++ + +
Sbjct: 77 FHIFFNMYFLFFAGRAVEDALGSTRFIFLYLISGLAASIFHSAYSFIGGLTSYAIPAI 134
>gi|403669619|ref|ZP_10934810.1| hypothetical protein KJC8E_12316 [Kurthia sp. JC8E]
Length = 206
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 29 PGTLTLILIQTLLYIMNVLAQPWDSLGICISA-----HTILNQRDYKRLVLSALEHGDDM 83
P T +LI +Y++ ++ S+G I A + ++ Q +Y R+V + HG M
Sbjct: 16 PMVSTFLLINIAVYLVGLV----PSIGNWIFAKGAAINFLIAQGEYWRVVTAIFIHGGFM 71
Query: 84 HLYYNMVSLIVKGRELERMFGSVQF 108
H+ NM L V G ELER+ G +F
Sbjct: 72 HVLSNMFWLYVFGPELERIAGKARF 96
>gi|340356603|ref|ZP_08679245.1| S54 family unassigned serine peptidase [Sporosarcina newyorkensis
2681]
gi|339620530|gb|EGQ25099.1| S54 family unassigned serine peptidase [Sporosarcina newyorkensis
2681]
Length = 202
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 58 ISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL 111
I + ++ +Y RLV HG HL +NM SL + G ELE++ G +F+ +
Sbjct: 46 IGDNFLIANGEYWRLVTPMFLHGGLTHLLFNMFSLFIFGPELEKIAGKARFITI 99
>gi|219121723|ref|XP_002181210.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407196|gb|EEC47133.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 342
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 43 IMNVLAQPWDS----LGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRE 98
I AQ W GI +S IL + RL+ HG H++ NM+SL G +
Sbjct: 97 IATFAAQAWKPSFTQWGIKVS-EKILRGEELYRLITPVFLHGGFGHIFTNMISLSRVGPD 155
Query: 99 LERMFGSVQFVV 110
+ER+FGS +F+
Sbjct: 156 VERLFGSGRFLT 167
>gi|229917793|ref|YP_002886439.1| rhomboid family protein [Exiguobacterium sp. AT1b]
gi|229469222|gb|ACQ70994.1| Rhomboid family protein [Exiguobacterium sp. AT1b]
Length = 241
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%)
Query: 29 PGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYN 88
P I+IQ L+++++ A + S H L + RLV + H HL +N
Sbjct: 16 PLVTLFIVIQLLVFVIDSFAPGLRIVATGGSFHLALADGQWYRLVTANFIHLSLGHLLFN 75
Query: 89 MVSLIVKGRELERMFGSVQFVVLVSF 114
+LI+ G +ERM G V+F + F
Sbjct: 76 SFALIIFGPAMERMVGHVKFALFYVF 101
>gi|421098295|ref|ZP_15558966.1| peptidase, S54 family [Leptospira borgpetersenii str. 200901122]
gi|410798563|gb|EKS00652.1| peptidase, S54 family [Leptospira borgpetersenii str. 200901122]
Length = 197
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 58 ISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLII 117
++ + + ++Y L S H D MHL +NM+S G+ LE G ++F++ I+
Sbjct: 29 LTPYRLKRNKNYYTLFTSGFIHADWMHLIFNMISFYSFGKNLEMTVGPIKFLLFYLGTIL 88
Query: 118 STSV 121
TSV
Sbjct: 89 ITSV 92
>gi|310795033|gb|EFQ30494.1| rhomboid family protein [Glomerella graminicola M1.001]
Length = 266
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 79 HGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL-VSFLIISTSVCYVMLSYVIYLMNHDV 137
H + +H N+++L E FG++ + L + L ++ YV++ ++ N V
Sbjct: 71 HKNFIHAIMNILALAPLMERFEAEFGTLTSISLFIGPLTTIPAILYVLIERFLFKGNVGV 130
Query: 138 TELYQCAIGFSAVLFSMKTIRT-RQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASF 196
A + +L + IRT + +P +T + +S+P P I ++++ +VP S
Sbjct: 131 ----MGASIWVFLLLGREAIRTYKTNPQLT--IATYSIPTWTTPLILILVVTALVPGTSL 184
Query: 197 KGHLSGILVGLCY 209
GHL G+ VG +
Sbjct: 185 LGHLCGVFVGYLF 197
>gi|189465270|ref|ZP_03014055.1| hypothetical protein BACINT_01616 [Bacteroides intestinalis DSM
17393]
gi|189437544|gb|EDV06529.1| peptidase, S54 family [Bacteroides intestinalis DSM 17393]
Length = 227
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWD-SLGICISAHTIL-NQRDYKRLVLSALEHGDDMH 84
IP T L++I L+++ ++AQ + L + H L + + +L+ HG H
Sbjct: 4 IPTVTKNLLIINVLVFLATIVAQSYGLDLARYLGLHFFLADNFNIAQLITYMFMHGGFTH 63
Query: 85 LYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYV--MLSYVIYLM 133
L++NM +L + GR LE+++G +F L +L+ ++ ++ YV Y M
Sbjct: 64 LFFNMFALWMFGRILEQVWGPKRF--LFYYLVCGIGAGFIQEIVQYVHYEM 112
>gi|393789836|ref|ZP_10377955.1| hypothetical protein HMPREF1068_04235 [Bacteroides nordii
CL02T12C05]
gi|392650239|gb|EIY43910.1| hypothetical protein HMPREF1068_04235 [Bacteroides nordii
CL02T12C05]
Length = 225
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 26 LIPPGTLTLILIQTLLYIMNVLAQPW-----DSLGICISAHTILNQRDYKRLVLSALEHG 80
++P T LI+I LLY+ ++AQ + D +G+ N +L+ HG
Sbjct: 1 MMPTVTKNLIIINVLLYLGTIVAQSYGIDLADYMGLHFFMADSFNP---AQLITYMFMHG 57
Query: 81 DDMHLYYNMVSLIVKGRELERMFGSVQFV 109
HL++NM ++ + GR LE+++G +F+
Sbjct: 58 GFTHLFFNMFAVWMFGRILEQVWGPKRFL 86
>gi|377564810|ref|ZP_09794121.1| rhomboid family protein [Gordonia sputi NBRC 100414]
gi|377527964|dbj|GAB39286.1| rhomboid family protein [Gordonia sputi NBRC 100414]
Length = 234
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 42/201 (20%)
Query: 28 PPGTLTLILIQTLLYIMNVL-AQPWDSLGICISAHTILNQRD-----YKRLVLSALEHGD 81
P GT LI + +++ + V+ A+ +D+ + H L + D Y RL+ + H
Sbjct: 11 PIGTYALIAVNVVIFALCVIQAKSFDAGLAPLFQHGDLVRADVANGEYWRLLTAGFLHFT 70
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
MH+ NM+SL + GR+LE G +F ++ Y I L
Sbjct: 71 VMHIALNMISLYILGRDLETALGHSRF----------------LMVYFIALFGGSA---- 110
Query: 142 QCAIGFSAVLFSMKTIRTRQSPDVTHQLLN----FSVPAVYAPW--IELVIIHLM----V 191
+ +LF +R+ + + L+ V A +P I +++I+L+ +
Sbjct: 111 ------AVMLFEAGNVRSAGASGAIYGLMGAMLVIVVKARISPTGVITIIVINLVFSVTM 164
Query: 192 PNASFKGHLSGILVGLCYTET 212
P S H+ G++ G T
Sbjct: 165 PGISLAAHVGGLVFGAAATAA 185
>gi|359460821|ref|ZP_09249384.1| rhomboid family protein [Acaryochloris sp. CCMEE 5410]
Length = 537
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 53 SLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLV 112
+LG I + + D+ RL+ +A H HL NM L + G +E+M G+ +F LV
Sbjct: 365 TLGALIPSEVVAG--DWWRLLAAAFLHFGIQHLSLNMFGLALLGPFVEKMLGTWRF--LV 420
Query: 113 SFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFS---------MKTIRTRQSP 163
S+L+ T++ ++ ++ + VT A+G S + ++ IR + S
Sbjct: 421 SYLM--TAIGSMLTLTLLTITGIFVTP---AAVGASGAIMGLIGTEAAIQLRIIRQQSSK 475
Query: 164 DVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGL 207
+L + V +I M P SF GH SG+++G
Sbjct: 476 VAATRLRLIGLFVVIQ-----MIFDAMTPQVSFIGHASGLVIGF 514
>gi|385651543|ref|ZP_10046096.1| rhomboid family membrane protein [Leucobacter chromiiresistens JG
31]
Length = 308
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 32/148 (21%)
Query: 71 RLVLSALEHGDD--MHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
RL+ + H +H+ +N+ +L + GR LE+ G F VL F + S+ +M +Y
Sbjct: 133 RLLTAMFTHSPTFFLHILFNLYALWLFGRNLEQAIGRAAFAVLFLFAGVGGSLGVMMWAY 192
Query: 129 VIYLMNHDVTELYQCAIGFSAVLF--------SMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V D L +G S +F +M+ R + +NF++
Sbjct: 193 V------DPQALVVPTVGASGAIFGVLAATLVAMRAARANITSLAVLIAINFAIG----- 241
Query: 181 WIELVIIHLMVPNA--SFKGHLSGILVG 206
++P A S++ HL G++VG
Sbjct: 242 ---------LIPGAAISWQAHLGGLIVG 260
>gi|456864209|gb|EMF82623.1| peptidase, S54 family [Leptospira weilii serovar Topaz str. LT2116]
Length = 197
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 58 ISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLII 117
++ + + ++Y L+ S H D MHL +NM+S G+ LE G ++F++ I+
Sbjct: 29 LTPYRLKRNKNYYTLLTSGFIHADWMHLIFNMISFYSFGKNLEITVGPIKFLLFYLGTIL 88
Query: 118 STSV 121
TSV
Sbjct: 89 ITSV 92
>gi|409098714|ref|ZP_11218738.1| rhomboid family protein [Pedobacter agri PB92]
Length = 206
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQF 108
+++ ++ L+ S L H D MHL++NM + G LE+M GS QF
Sbjct: 39 YSVSKGQNVYTLITSGLIHADWMHLFFNMFTFYAFGFALEQMMGSWQF 86
>gi|399024170|ref|ZP_10726216.1| putative membrane protein [Chryseobacterium sp. CF314]
gi|398081044|gb|EJL71829.1| putative membrane protein [Chryseobacterium sp. CF314]
Length = 213
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 62 TILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL 111
I +++Y RL+ SA H D MHL++NM+SL + FG++ F+++
Sbjct: 35 AITGRKEYIRLISSAFLHADFMHLFFNMLSLYFFQGVVIYFFGNIGFLII 84
>gi|323490567|ref|ZP_08095773.1| hypothetical protein GPDM_14436 [Planococcus donghaensis MPA1U2]
gi|323395833|gb|EGA88673.1| hypothetical protein GPDM_14436 [Planococcus donghaensis MPA1U2]
Length = 202
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 33 TLILIQTLLYIMNVLAQPWDSLGICISAHTI-----LNQRDYKRLVLSALEHGDDMHLYY 87
TLI + L+Y++ L SLG I + + + + + R H MHL +
Sbjct: 20 TLIALNLLVYVLMWL----PSLGQWIYFYGVGSNFYIAEGQWWRFFTPMFLHNGVMHLLF 75
Query: 88 NMVSLIVKGRELERMFGSVQFVVL 111
NM SL + G ELER+ G V+F +
Sbjct: 76 NMFSLFLFGPELERLTGKVRFTTI 99
>gi|256374174|ref|YP_003097834.1| rhomboid family protein [Actinosynnema mirum DSM 43827]
gi|255918477|gb|ACU33988.1| Rhomboid family protein [Actinosynnema mirum DSM 43827]
Length = 298
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 16/143 (11%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
++ RLV S H H+ NM SL + GR+LE + G +F+ + ++ S +
Sbjct: 132 EWWRLVTSGFLHLGVTHIGLNMASLYILGRDLEPVLGRARFLAVYLLSLLGGSASVYLFE 191
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVII 187
V+ L +Y ++ S+ + R+ + T L ++ V +
Sbjct: 192 EVVSLTAGASGAIY-------GLMGSLLVVLLRRRLNATPVLAIIAIN---------VFL 235
Query: 188 HLMVPNASFKGHLSGILVGLCYT 210
+PN S GHL GI VG T
Sbjct: 236 SFSLPNISILGHLGGIAVGAAVT 258
>gi|296127888|ref|YP_003635138.1| rhomboid family protein [Cellulomonas flavigena DSM 20109]
gi|296019703|gb|ADG72939.1| Rhomboid family protein [Cellulomonas flavigena DSM 20109]
Length = 238
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 73/176 (41%), Gaps = 18/176 (10%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDM-HLYYNM 89
TLT+I + Y++ + W S + + + R + +A H + H+ +NM
Sbjct: 33 TLTIIGLCVASYVLQLAVPGWTSR---WAFSPVAGAFEPWRFLTAAFLHSTGVFHILFNM 89
Query: 90 VSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIG-FS 148
V+L + G LE+ G +F L + SV V+L+ + G F
Sbjct: 90 VALWMVGPSLEQTLGRARFATLYLVSALGGSVGAVLLAPATGSWLTPIVGASGAVFGMFG 149
Query: 149 AVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGIL 204
AVL ++ + P + +LN ++ ++PN +++ HL G++
Sbjct: 150 AVLVVLRRMGRDAGPIIGILVLNG-------------VLGFVLPNIAWQAHLGGLV 192
>gi|404212656|ref|YP_006666831.1| putative membrane protein [Gordonia sp. KTR9]
gi|403643455|gb|AFR46695.1| putative membrane protein [Gordonia sp. KTR9]
Length = 237
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 77/193 (39%), Gaps = 26/193 (13%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQP-WDSLGICI-SAHTILNQ----RDYKRLVLSALEHGD 81
P T LI + L++ + VL D G I SA +L +Y RL+ + H
Sbjct: 11 PYATYALIAVNLLVFALCVLQSGVGDPGGASIFSAGDLLKSDVASGEYWRLLTAGFLHFS 70
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
MH+ NM+SL + GR+LE G +++ + ++ S + L D
Sbjct: 71 VMHVAVNMLSLYILGRDLELALGIGRYLAVYGIALLGGSAA-------VMLFEDDRALTA 123
Query: 142 QCAIGFSAVLFSMKTI--RTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGH 199
+ ++ +M I + R SP ++ F+ V++ +P S GH
Sbjct: 124 GASGAIYGLMGAMLVIVLKARVSPVPVLLIIGFN-----------VVLSFSLPGISVLGH 172
Query: 200 LSGILVGLCYTET 212
L G+ G T
Sbjct: 173 LGGLFFGAAATAA 185
>gi|389774391|ref|ZP_10192510.1| hypothetical protein UU7_01252 [Rhodanobacter spathiphylli B39]
gi|388437990|gb|EIL94745.1| hypothetical protein UU7_01252 [Rhodanobacter spathiphylli B39]
Length = 204
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
++V SA HG H+ +NM++L + G +ER FG+ F + IS S+ + V+
Sbjct: 48 QIVTSAFMHGSLTHIAFNMIALYMFGGTIERTFGARNFTLYYFVCAISASLLQLA---VL 104
Query: 131 YLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP-------AVYAPWIE 183
+ V +G S +F + P L+ +P ++YA E
Sbjct: 105 WFFPGQVGP----TLGASGAIFGLLLAFGVLYPQEKVMLIFLPIPMPAWLFVSLYAA-AE 159
Query: 184 LVI-IHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSR 227
L + + + P + HL G+L G+ + GRL + R + R
Sbjct: 160 LTMGVTGIEPGVAHFAHLGGMLGGIVLIQYWRGRLPWKPRRRLLR 204
>gi|386002483|ref|YP_005920782.1| rhomboid family protein [Methanosaeta harundinacea 6Ac]
gi|357210539|gb|AET65159.1| Rhomboid family protein [Methanosaeta harundinacea 6Ac]
Length = 236
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 22/138 (15%)
Query: 79 HGDDMHLYYNMVSLIVKGRELERMFGSVQF--VVLVSFLIISTSVCYVMLSYVIYLMNHD 136
H D HL +NM+ L G ELER G +F + ++S L+ + V+ +
Sbjct: 101 HADMAHLLFNMIFLFFFGTELERRVGESRFLQIFIISGLVAAIGQMAVLPA--------- 151
Query: 137 VTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP-AVYAPWIELVIIHLM----V 191
+G S LF + +P++T LL F +P ++ A + II
Sbjct: 152 -----GSMVGASGALFGVMGCLAVIAPEIT-VLLFFVIPLSIRAAVVLFAIIDFAFMGSA 205
Query: 192 PNASFKGHLSGILVGLCY 209
N + H++G+LVGL Y
Sbjct: 206 DNIAHMAHIAGLLVGLAY 223
>gi|398330785|ref|ZP_10515490.1| intramembrane protease [Leptospira alexanderi serovar Manhao 3 str.
L 60]
Length = 197
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 58 ISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLII 117
++ + + ++Y L+ S H D MHL +NM+S G+ LE G ++F++ I+
Sbjct: 29 LTPYRLKRNKNYYTLLTSGFIHADWMHLIFNMISFYSFGKNLEITVGPIKFLLFYLGTIL 88
Query: 118 STSV 121
TSV
Sbjct: 89 ITSV 92
>gi|397733720|ref|ZP_10500434.1| rhomboid family protein [Rhodococcus sp. JVH1]
gi|396930518|gb|EJI97713.1| rhomboid family protein [Rhodococcus sp. JVH1]
Length = 305
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 62/146 (42%), Gaps = 21/146 (14%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQF--VVLVSFLIISTSVCYVMLSY 128
R++ S H +HL NM +L V GR+ E + G ++ V S L S +V L
Sbjct: 132 RVLGSGFLHFGIIHLAVNMFALWVIGRDTELVLGRARYACVYFASLLGGSAAVMLFQLGA 191
Query: 129 VIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIH 188
V + V L +G AV+ +R R+SP ++ +V II
Sbjct: 192 VTAGASGAVFGL----MGAQAVIL----LRLRRSPAPVISVIAINV-----------IIS 232
Query: 189 LMVPNASFKGHLSGILVGLCYTETSL 214
+ +P S GHL G++ G T L
Sbjct: 233 ITIPGISLWGHLGGLVAGAAATAGIL 258
>gi|330816995|ref|YP_004360700.1| rhomboid family protein [Burkholderia gladioli BSR3]
gi|327369388|gb|AEA60744.1| rhomboid family protein [Burkholderia gladioli BSR3]
Length = 190
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 77 LEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL 111
L H +HL YNM+ L + GR+LER+ GS +F+VL
Sbjct: 47 LLHAGVVHLTYNMMGLALFGRDLERLLGSARFLVL 81
>gi|148652124|ref|YP_001279217.1| rhomboid family protein [Psychrobacter sp. PRwf-1]
gi|148571208|gb|ABQ93267.1| Rhomboid family protein [Psychrobacter sp. PRwf-1]
Length = 206
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCY 123
+N+ ++ R + H D HL +NM +L GR +ER F QF L F ++ +
Sbjct: 40 VNKGEWYRFITHGFVHADSTHLLFNMFTLYFFGRAVERFFN--QF--LGGFGFVAVYLGA 95
Query: 124 VMLSYVIYLMNHDVTELYQ---CAIGFSAVLFSM 154
++++ + + H Y+ + G SA+LFS
Sbjct: 96 IIVAMIPSYLQHKNDPRYRSLGASGGVSAILFSF 129
>gi|441142545|ref|ZP_20962413.1| hypothetical protein SRIM_00110 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440622490|gb|ELQ85269.1| hypothetical protein SRIM_00110 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 303
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
+ ++ RL+ + H MH+ +NM+SL G LE FG V+F+ L + S
Sbjct: 136 EGEWYRLLTAVFLHQAPMHIIFNMLSLWWLGPPLEAAFGRVRFLALYLLSGLGGSA---- 191
Query: 126 LSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELV 185
LSY++ N Q ++G S +F + + + LN+ + V +
Sbjct: 192 LSYLLAAQN-------QPSLGASGAIFGLLGATV-----ILMRRLNYDMRPVLILLALNL 239
Query: 186 IIHLMVPNASFKGHLSGILVGLCYT 210
+ P+ +++ H+ G+++G T
Sbjct: 240 VFTFAWPDIAWQAHVGGLVMGAAVT 264
>gi|422323889|ref|ZP_16404926.1| hypothetical protein HMPREF0737_00036 [Rothia mucilaginosa M508]
gi|353344682|gb|EHB88983.1| hypothetical protein HMPREF0737_00036 [Rothia mucilaginosa M508]
Length = 276
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 14/89 (15%)
Query: 31 TLTLILIQTLLY-IMNVLAQPWDSLGICISAH-----TILNQRDYKRLVLSALEH--GDD 82
T TLILI +Y + ++ W + H + +Y R++ H D
Sbjct: 81 TYTLILINVAMYGLQQIIPNEW------VVRHGNIWWPYVQHGEYYRVISYGFLHMQHDP 134
Query: 83 MHLYYNMVSLIVKGRELERMFGSVQFVVL 111
MHL +NM+SL + G LERM G +F+V+
Sbjct: 135 MHLVWNMISLFIYGVSLERMMGRWKFLVV 163
>gi|441432485|ref|YP_007354527.1| Integral membrane protein [Acanthamoeba polyphaga moumouvirus]
gi|371944779|gb|AEX62601.1| putative rhomboid protein [Moumouvirus Monve]
gi|440383565|gb|AGC02091.1| Integral membrane protein [Acanthamoeba polyphaga moumouvirus]
Length = 177
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 74 LSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLM 133
L H + HL N +SL LE + G QF + + F+ I +S+ ++Y++
Sbjct: 46 LRTFYHANLEHLLANSISL-YSLSFLEDLMGHKQFALAIIFIWIVSSI-------ILYII 97
Query: 134 NHDVTELYQCAIGFSAVLFSMKTIRTR---QSPDVTHQLLNFSVPAVYAPWIELVIIHLM 190
+ + +GFS V+F + I Q +T L S+ L+
Sbjct: 98 HALIPSRKVYTVGFSGVIFGLIVIYYMSLGQGVGITLTGLVVSILP-----------QLV 146
Query: 191 VPNASFKGHLSGILVGLCY 209
+P SF+GHLSGI+ G+ Y
Sbjct: 147 IPGISFEGHLSGIIAGIIY 165
>gi|363419988|ref|ZP_09308085.1| serine peptidase [Rhodococcus pyridinivorans AK37]
gi|359736660|gb|EHK85603.1| serine peptidase [Rhodococcus pyridinivorans AK37]
Length = 308
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 26/144 (18%)
Query: 58 ISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQF--VVLVSFL 115
I+AH +Y R++ S H +HL NM +L V GR+ E + G ++ V LVS L
Sbjct: 127 IAAHG-----EYIRILGSGFLHFGLLHLAVNMFALWVIGRDTELVLGRARYLSVYLVSIL 181
Query: 116 IISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP 175
S +V ++ V + V L +G AV+ +R R+SP ++ +
Sbjct: 182 GGSAAVMFMETGAVTAGASGAVFGL----LGAQAVIL----LRLRRSPAPVLTIVGLN-- 231
Query: 176 AVYAPWIELVIIHLMVPNASFKGH 199
VII + VP S GH
Sbjct: 232 ---------VIISITVPGISLWGH 246
>gi|422323890|ref|ZP_16404927.1| hypothetical protein HMPREF0737_00037 [Rothia mucilaginosa M508]
gi|353344683|gb|EHB88984.1| hypothetical protein HMPREF0737_00037 [Rothia mucilaginosa M508]
Length = 270
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 31 TLTLILIQTLLY-IMNVLAQPW-DSLGICISAHTILNQRDYKRLVLSALEH--GDDMHLY 86
T TLILI ++Y + ++ W +LG +S ++ ++ +Y RL+ H D MHL
Sbjct: 76 TYTLILINVVVYGLQQIIPFRWVYNLG-AMSGPSV-HRGEYYRLITHGFLHSQNDPMHLV 133
Query: 87 YNMVSLIVKGRELERMFGSVQFV 109
+NM+ L + G LERM G +F+
Sbjct: 134 WNMIYLFIFGVSLERMMGRWKFL 156
>gi|436833412|ref|YP_007318628.1| rhomboid family protein [Fibrella aestuarina BUZ 2]
gi|384064825|emb|CCG98035.1| rhomboid family protein [Fibrella aestuarina BUZ 2]
Length = 262
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 29 PGTLTLILIQTLLYIM--NVLAQPWDSLGICISAHTILNQR-DYKRLVLSALEHGDDMHL 85
P TL+L+ L+Y + +V + D + H++L+Q+ + +L+ HG+ HL
Sbjct: 6 PAVRTLLLVNVLVYFLTSSVREEVIDQFAL----HSLLSQQFNIIQLITHMFMHGNFSHL 61
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
+ NM+ L+V G LE+ +G+ +F+ + + Y+ ++Y
Sbjct: 62 FSNMLGLLVFGPLLEKTWGASRFLTFYLLTGLGAAALYLAVNY 104
>gi|340518817|gb|EGR49057.1| predicted protein [Trichoderma reesei QM6a]
Length = 281
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 6/137 (4%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLV-SFLIISTSVCYVMLSYV 129
RL L H + H N V+L E +G++ + L L +V Y+ +
Sbjct: 62 RLNTFPLVHLNFFHAVLNAVALAPLMERFESEYGTLTTLALFFGPLTTIPAVLYLFIEIA 121
Query: 130 IYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHL 189
I NH V A + +L M+ IRT +S + + + +P P + +V++
Sbjct: 122 ILRANHAV----MGASMWVFLLLGMEAIRTYKS-NPYLVIGTYHLPTWTTPLLMIVVVAA 176
Query: 190 MVPNASFKGHLSGILVG 206
+VPN S GHL G+ VG
Sbjct: 177 LVPNTSLLGHLCGVAVG 193
>gi|119962891|ref|YP_945847.1| rhomboid family membrane protein [Arthrobacter aurescens TC1]
gi|403525113|ref|YP_006660000.1| rhomboid family membrane protein [Arthrobacter sp. Rue61a]
gi|119949750|gb|ABM08661.1| putative rhomboid family membrane protein [Arthrobacter aurescens
TC1]
gi|403227540|gb|AFR26962.1| putative rhomboid family membrane protein [Arthrobacter sp. Rue61a]
Length = 284
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 85/195 (43%), Gaps = 32/195 (16%)
Query: 20 LSVGFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEH 79
L+VG L+ T +I + L+Y++ + P D++ + I + R+V +A H
Sbjct: 72 LAVGRPLV---TFVIIGLCALVYVLQWIV-PGDAVFEDFAFANIFAVSEPWRMVTAAFLH 127
Query: 80 GDD--MHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDV 137
+H+ NM +L + G+ LE + G ++F+ + I SV ++ L+ + +
Sbjct: 128 SQGFLLHIVLNMYTLWIFGQALEPLLGRIRFLAVYLISAIGGSVGFLALTPTLPPVG--- 184
Query: 138 TELYQCAIGFSAVLFSM---KTIRTRQSPDVTHQLLNFSVPAVYAPWIELVI---IHLMV 191
+G S +F + + R T QL W+ + I I V
Sbjct: 185 ------VVGASGAIFGLFGAMLVVQRHRGGETKQL-----------WVLIAINGAIGFFV 227
Query: 192 PNASFKGHLSGILVG 206
P+ +++ HL G++ G
Sbjct: 228 PSIAWQAHLGGLITG 242
>gi|444715566|gb|ELW56431.1| Rhomboid domain-containing protein 2 [Tupaia chinensis]
Length = 346
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 55 GICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQ--FVVLV 112
G+ + + + N + Y RLV + + + L + + ER G+V+ F LV
Sbjct: 50 GLSLKSEALRNWQVY-RLVTYIFVYENPVSLLCGAIIIWRFAGNFERTVGTVRHCFFTLV 108
Query: 113 SFLIISTSVCYVMLSYVIYLMNHDVTELYQC-----AIGFSAVLFSMKTIRTRQSPDVTH 167
+ + S +I+L V+ L + A GF+ V F+M + T +S
Sbjct: 109 ----------FAVFSAIIFLSFEAVSSLSKLGEVEDARGFTPVAFAMLGVTTVRSRMRRA 158
Query: 168 QLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
+ VP+V PW+ L+ ++P SF ++ G+ +GL Y
Sbjct: 159 LVFGMVVPSVLVPWL-LLGASWLIPQTSFLSNVCGLSIGLAY 199
>gi|427388161|ref|ZP_18884044.1| hypothetical protein HMPREF9447_05077 [Bacteroides oleiciplenus YIT
12058]
gi|425724744|gb|EKU87618.1| hypothetical protein HMPREF9447_05077 [Bacteroides oleiciplenus YIT
12058]
Length = 227
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWD-SLGICISAHTIL-NQRDYKRLVLSALEHGDDMH 84
IP T L++I L+++ ++AQ + L + H L + + +L+ HG H
Sbjct: 4 IPTVTKNLLIINVLVFLATIVAQTYGIDLARYLGLHFFLADNFNIAQLITYMFMHGGFTH 63
Query: 85 LYYNMVSLIVKGRELERMFGSVQFV 109
L++NM +L + GR LE+++G +F+
Sbjct: 64 LFFNMFALWMFGRILEQVWGPKRFL 88
>gi|78187966|ref|YP_376009.1| hypothetical protein Plut_2124 [Chlorobium luteolum DSM 273]
gi|78167868|gb|ABB24966.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
Length = 273
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 23 GFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTIL------NQRDYKRLVLSA 76
GF +IPP +ILI ++++ + + + G + + L N R ++ L
Sbjct: 14 GFQVIPPAIKAIILINVGVFLL----ESFPAFGNVLLSELALWPISSGNFRIWQPLTYLF 69
Query: 77 LEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVV 110
L HG H+++NM +L + G E+E +G+ QF V
Sbjct: 70 L-HGGTAHIFFNMFALWIFGAEIENHWGTKQFNV 102
>gi|418459787|ref|ZP_13030898.1| membrane protein [Saccharomonospora azurea SZMC 14600]
gi|359740100|gb|EHK88949.1| membrane protein [Saccharomonospora azurea SZMC 14600]
Length = 267
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
++ RL+ S H +HL NM++L V GR+LE + G V+FV L FL + V
Sbjct: 90 EWWRLLTSGFLHYGLIHLAMNMLALWVLGRDLEMLLGRVRFVAL-YFLSMFAGGAAVFAF 148
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVII 187
+ +G A+L ++ +R + + +LN VI+
Sbjct: 149 GAADTGTAGASGAIYGLMG--AILVAVLRLRLNPTTAIGIIVLN-------------VIL 193
Query: 188 HLMVPNASFKGHLSGILVG 206
+ +PN S GHL G++ G
Sbjct: 194 SVSIPNISLLGHLGGLVAG 212
>gi|381163863|ref|ZP_09873093.1| putative membrane protein [Saccharomonospora azurea NA-128]
gi|379255768|gb|EHY89694.1| putative membrane protein [Saccharomonospora azurea NA-128]
Length = 317
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
++ RL+ S H +HL NM++L V GR+LE + G V+FV L FL + V
Sbjct: 140 EWWRLLTSGFLHYGLIHLAMNMLALWVLGRDLEMLLGRVRFVALY-FLSMFAGGAAVFAF 198
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVII 187
+ +G A+L ++ +R + + +LN VI+
Sbjct: 199 GAADTGTAGASGAIYGLMG--AILVAVLRLRLNPTTAIGIIVLN-------------VIL 243
Query: 188 HLMVPNASFKGHLSGILVG 206
+ +PN S GHL G++ G
Sbjct: 244 SVSIPNISLLGHLGGLVAG 262
>gi|358447564|ref|ZP_09158084.1| rhomboid family protein [Corynebacterium casei UCMA 3821]
gi|356606496|emb|CCE56455.1| rhomboid family protein [Corynebacterium casei UCMA 3821]
Length = 217
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 31/147 (21%)
Query: 76 ALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNH 135
A H D HL NM L++ GRE+ER FG+V FV L IS+ + + L ++
Sbjct: 69 AFMHLDIGHLTVNMFMLMLIGREVERHFGTVLFVALYISAAISSGLLILTLDFM------ 122
Query: 136 DVTELYQCAIGFSAVLFSMKTI-----RTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLM 190
G S LF++ + R+R + D+ ++ +V +Y +
Sbjct: 123 ------SPTAGASGALFALMVLLVSVYRSRGA-DLRAPIVLVAVNVIYT---------FI 166
Query: 191 VPNASFKGHLSGILVG----LCYTETS 213
S GHL G+ G LC T S
Sbjct: 167 SAGVSLWGHLGGLFAGIILALCVTRKS 193
>gi|311112557|ref|YP_003983779.1| rhomboid family protein [Rothia dentocariosa ATCC 17931]
gi|310944051|gb|ADP40345.1| rhomboid family protein [Rothia dentocariosa ATCC 17931]
Length = 261
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 88/210 (41%), Gaps = 25/210 (11%)
Query: 25 HLIPPGTLTLILIQTLLYIMN-VLAQPWDSLGICISAHTILNQRDYKRLVLSALEH--GD 81
+P T TLI I ++Y++ ++ Q W + +Y R++ S H D
Sbjct: 70 RFVPYVTYTLIGINVVVYLLQLIIPQYWVYSMFALKWDYTEFTGEYYRVLTSGFLHSQND 129
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
H+ NM+SL + G LE+M G +++++ I+ S+ + L++ E+
Sbjct: 130 YSHIVMNMLSLYIFGIALEQMMGWWRYLLVYLLSIVGG-------SFGVLLLDDPTAEVV 182
Query: 142 QCAIG----FSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFK 197
+ G A L M +R R ++ ++ +V + +VP S++
Sbjct: 183 GASGGIFGLIGAYLVIMVVLRERD--NIRALMIMIAVNVAFG---------FLVPGISWQ 231
Query: 198 GHLSGILVGLCYTETSLGRLVERSGRSVSR 227
H G ++G T L + + RS+ R
Sbjct: 232 AHAGGFVIGALATAVLLAPQIIQRTRSIRR 261
>gi|406576099|ref|ZP_11051770.1| rhomboid family protein [Janibacter hoylei PVAS-1]
gi|404554503|gb|EKA60034.1| rhomboid family protein [Janibacter hoylei PVAS-1]
Length = 297
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 19/145 (13%)
Query: 64 LNQRDYKRLVLSALEHGDD--MHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSV 121
L + RL+ SA H + MH+ +NM++L + G LERM G +++ + ++ SV
Sbjct: 112 LGTAEPWRLITSAFAHSPNQPMHILFNMLALWLVGGYLERMLGWARYLAVYLVAALAGSV 171
Query: 122 CYVMLSYVIYLMNHDVTELYQCAIGFSAV---LFSMKTIRTRQ-SPDVTHQLLNFSVPAV 177
+++ V + Y +G S LF+ + R D + + + AV
Sbjct: 172 TWLLFQPV----DPYDPGAYVPVVGASGAVFGLFAAVIVLNRHLGRDSSSMIATIGINAV 227
Query: 178 YAPWIELVIIHLMVPNASFKGHLSG 202
I +VPN +++ HL G
Sbjct: 228 ---------IGFVVPNVAWEAHLGG 243
>gi|402863172|ref|XP_003895905.1| PREDICTED: rhomboid domain-containing protein 2 [Papio anubis]
Length = 364
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 46 VLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
+L P G+ + + + N + Y RLV + + + L + + ER G+
Sbjct: 38 LLQPPLAPSGLTLKSEALRNWQVY-RLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGT 96
Query: 106 VQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-----AIGFSAVLFSMKTIRTR 160
V+ +V + + S +I+L V+ L + A GF+ V F+M + T
Sbjct: 97 VRHCFF--------TVIFAIFSAIIFLSFEAVSSLSKLGEVEDARGFTPVAFAMLGVTTV 148
Query: 161 QSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
+S + VP+V PW+ L+ ++P SF ++ G+ +GL Y
Sbjct: 149 RSRMRRALVFGMVVPSVLVPWL-LLGASWLIPQTSFLSNVCGLSIGLAY 196
>gi|358462907|ref|ZP_09173011.1| Peptidase S54, rhomboid domain protein [Frankia sp. CN3]
gi|357071027|gb|EHI80658.1| Peptidase S54, rhomboid domain protein [Frankia sp. CN3]
Length = 400
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
+Y RLV +A HG +H+ +NM +L + G +LE + G +++ L F C + +
Sbjct: 232 EYWRLVTAAFLHGSVLHILFNMYALFLLGTQLEAVLGRARYLAL--FF-----ACAIGGN 284
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFS 153
+ YLM+ + T Y G S +F
Sbjct: 285 TLSYLMSGERTFSY----GASTAIFG 306
>gi|171741704|ref|ZP_02917511.1| hypothetical protein BIFDEN_00792 [Bifidobacterium dentium ATCC
27678]
gi|283454987|ref|YP_003359551.1| rhomboid family protein [Bifidobacterium dentium Bd1]
gi|171277318|gb|EDT44979.1| peptidase, S54 family [Bifidobacterium dentium ATCC 27678]
gi|283101621|gb|ADB08727.1| rhomboid family protein [Bifidobacterium dentium Bd1]
Length = 260
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 22/150 (14%)
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVL--VSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
H+ +NM++L G LERM G F+ L VS L T +ML V+ + T +Y
Sbjct: 96 HILFNMLTLWCVGPVLERMMGHWSFLALYAVSGLAGGTG---MMLWAVLSGASGWSTPVY 152
Query: 142 QCAIG----FSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFK 197
+ F+A+L + I + L+NF +P + +PN +++
Sbjct: 153 GASGALFGLFAAILVVYRRIGLDIRSMMIWMLINFLMPVI-------------MPNIAWQ 199
Query: 198 GHLSGILVGLCYTETSLGRLVERSGRSVSR 227
HL G L G +T + L G+S+ R
Sbjct: 200 AHLGGFLFGGMFTWLLVSGLRVLRGKSLLR 229
>gi|395738284|ref|XP_002817870.2| PREDICTED: rhomboid domain-containing protein 2 [Pongo abelii]
Length = 364
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 46 VLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
+L P G+ + + + N + Y RLV + + + L + + ER G+
Sbjct: 38 LLQPPLAPSGLTLKSEALRNWQVY-RLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGT 96
Query: 106 VQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-----AIGFSAVLFSMKTIRTR 160
V+ +V + + S +I+L V+ L + A GF+ V F+M + T
Sbjct: 97 VRHCFF--------TVIFAIFSAIIFLSFEAVSSLSKLGEVEDARGFTPVAFAMLGVTTV 148
Query: 161 QSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
+S + VP+V PW+ L+ ++P SF ++ G+ +GL Y
Sbjct: 149 RSRMRRALVFGMVVPSVLVPWL-LLGASWLIPQTSFLSNVCGLSIGLAY 196
>gi|224541443|ref|ZP_03681982.1| hypothetical protein CATMIT_00605 [Catenibacterium mitsuokai DSM
15897]
gi|224525635|gb|EEF94740.1| peptidase, S54 family [Catenibacterium mitsuokai DSM 15897]
Length = 183
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 65 NQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSV 121
N+ +Y R + SA H + +HL+ NM + GR E + G V++++LV I+ +S+
Sbjct: 36 NRGEYWRFITSAFIHTEFLHLFMNMYCIFYLGRLFETILGPVRYLILVLVSIVMSSL 92
>gi|150019138|ref|YP_001311392.1| rhomboid family protein [Clostridium beijerinckii NCIMB 8052]
gi|149905603|gb|ABR36436.1| Rhomboid family protein [Clostridium beijerinckii NCIMB 8052]
Length = 328
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 51 WDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVV 110
W L + ++NQ Y RL+ A HG +H+ NM SL + G E+++++G ++ +
Sbjct: 171 WVLLKYGGKVNELINQGQYWRLLTCAFLHGGLIHIVGNMYSLYILGPEIQQIYGVYKYFI 230
Query: 111 LVSFLIISTS-VCYVMLSYV 129
+ F +++S + Y M Y+
Sbjct: 231 IYIFSCLTSSLLSYFMSPYL 250
>gi|348027528|ref|YP_004870214.1| glpG protein [Glaciecola nitratireducens FR1064]
gi|347944871|gb|AEP28221.1| putative glpG protein [Glaciecola nitratireducens FR1064]
Length = 323
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 67 RDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVML 126
+ RL A H +H+ +N++ V G +LER FGS+ V+ + IS++V +++
Sbjct: 177 NQWWRLFTPAFIHFGVIHIVFNLIWWWVLGSQLERSFGSISLAVIFAIAAISSNVAQLLV 236
Query: 127 S 127
S
Sbjct: 237 S 237
>gi|336430826|ref|ZP_08610764.1| hypothetical protein HMPREF0994_06770 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336016582|gb|EGN46362.1| hypothetical protein HMPREF0994_06770 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 209
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLY 86
IP + L +++++ W + A ++ ++Y RLV + H D HL
Sbjct: 17 IPWCSAVLTAANVIIFLVCQFTGDWLYIKGEFGAFYLIRSQEYYRLVTAMFLHADISHLV 76
Query: 87 YNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIG 146
NM+ L G +E+ GSV+++VL F + + +C +L+ + + T +Y +IG
Sbjct: 77 NNMILLYFGGEIVEKTIGSVRYLVL--FFV--SGICGNLLTAIFEVS----TGMYFNSIG 128
Query: 147 FSAVLFSM 154
S +F +
Sbjct: 129 ASGAVFGL 136
>gi|355560549|gb|EHH17235.1| hypothetical protein EGK_13585 [Macaca mulatta]
gi|387539278|gb|AFJ70266.1| rhomboid domain-containing protein 2 isoform a [Macaca mulatta]
Length = 364
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 46 VLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
+L P G+ + + + N + Y RLV + + + L + + ER G+
Sbjct: 38 LLQPPLAPSGLTLKSEALRNWQVY-RLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGT 96
Query: 106 VQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-----AIGFSAVLFSMKTIRTR 160
V+ +V + + S +I+L V+ L + A GF+ V F+M + T
Sbjct: 97 VRHCFF--------TVIFAIFSAIIFLSFEAVSSLSKLGEVEDARGFTPVAFAMLGVTTV 148
Query: 161 QSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
+S + VP+V PW+ L+ ++P SF ++ G+ +GL Y
Sbjct: 149 RSRMRRALVFGMVVPSVLVPWL-LLGASWLIPQTSFLSNVCGLSIGLAY 196
>gi|328768388|gb|EGF78434.1| hypothetical protein BATDEDRAFT_90374 [Batrachochytrium
dendrobatidis JAM81]
Length = 351
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 82/197 (41%), Gaps = 26/197 (13%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDY--------KRLVLSALE 78
IP GTL +I + LL+I+N+L+ G ++ L +Y RL L
Sbjct: 19 IPLGTLIIIGVSLLLFIVNMLS------GGAVTGAWCLVPTNYTYSPVVGLPRLFGYGLV 72
Query: 79 HGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVT 138
H +H MV+ + LE G++ F+ L S L + T Y + +V +
Sbjct: 73 HSGIVHFIVAMVAFPLATATLEFSIGTLPFLYLFSILGMLTGFLYCFVIWVFSFI-WPSW 131
Query: 139 ELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFS------VPAVYAPWIELVIIHLMVP 192
LY G F+ TI T + F+ +P + P +V+ +++P
Sbjct: 132 GLYPVN-GMDIPFFTFLTIETLSK----RGIFKFASEAGVQLPEILFPLPFVVVFLIILP 186
Query: 193 NASFKGHLSGILVGLCY 209
+S+ HL + +G+ Y
Sbjct: 187 YSSWISHLCAMSIGILY 203
>gi|355747580|gb|EHH52077.1| hypothetical protein EGM_12447 [Macaca fascicularis]
Length = 364
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 46 VLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
+L P G+ + + + N + Y RLV + + + L + + ER G+
Sbjct: 38 LLQPPLAPSGLTLKSEALRNWQVY-RLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGT 96
Query: 106 VQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-----AIGFSAVLFSMKTIRTR 160
V+ +V + + S +I+L V+ L + A GF+ V F+M + T
Sbjct: 97 VRHCFF--------TVIFAIFSAIIFLSFEAVSSLSKLGEVEDARGFTPVAFAMLGVTTV 148
Query: 161 QSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
+S + VP+V PW+ L+ ++P SF ++ G+ +GL Y
Sbjct: 149 RSRMRRALVFGMVVPSVLVPWL-LLGASWLIPQTSFLSNVCGLSIGLAY 196
>gi|383420245|gb|AFH33336.1| rhomboid domain-containing protein 2 isoform a [Macaca mulatta]
Length = 364
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 46 VLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
+L P G+ + + + N + Y RLV + + + L + + ER G+
Sbjct: 38 LLQPPLAPSGLTLKSEALRNWQVY-RLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGT 96
Query: 106 VQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-----AIGFSAVLFSMKTIRTR 160
V+ +V + + S +I+L V+ L + A GF+ V F+M + T
Sbjct: 97 VRHCFF--------TVIFAIFSAIIFLSFEAVSSLSKLGEVEDARGFTPVAFAMLGVTTV 148
Query: 161 QSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
+S + VP+V PW+ L+ ++P SF ++ G+ +GL Y
Sbjct: 149 RSRMRRALVFGMVVPSVLVPWL-LLGASWLIPQTSFLSNVCGLSIGLAY 196
>gi|333368401|ref|ZP_08460601.1| rhomboid family protein [Psychrobacter sp. 1501(2011)]
gi|332977324|gb|EGK14112.1| rhomboid family protein [Psychrobacter sp. 1501(2011)]
Length = 206
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCY 123
+N+ ++ R + H D HL +NM +L GR +ER F QF+ FL +
Sbjct: 40 VNKGEWYRFITHGFIHADSTHLLFNMFTLYFFGRAVERFFN--QFLGGFGFLAVYLGAII 97
Query: 124 VML--SYVIYLMNHDVTELYQCAIGFSAVLFSM 154
V + SY+ + + + L + G SA+LFS
Sbjct: 98 VAMIPSYLQHKNDANYRSL-GASGGVSAILFSF 129
>gi|108802111|ref|YP_642308.1| rhomboid-like protein [Mycobacterium sp. MCS]
gi|119871264|ref|YP_941216.1| rhomboid family protein [Mycobacterium sp. KMS]
gi|108772530|gb|ABG11252.1| Rhomboid-like protein [Mycobacterium sp. MCS]
gi|119697353|gb|ABL94426.1| Rhomboid family protein [Mycobacterium sp. KMS]
Length = 289
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 21/144 (14%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
++ RL SA H MHL +NM +L V G LE G ++F L + + SV L
Sbjct: 114 EWYRLATSAFLHYGAMHLLFNMWALYVVGPPLEMWLGRLRFGALYALSALGGSV----LV 169
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVII 187
Y++ +N G +F V + LN + + A I ++
Sbjct: 170 YLLSPINAATAGASGAVFGLFGAMF------------VVARKLNLDIRGIAAIIILNLVF 217
Query: 188 HLMVP-----NASFKGHLSGILVG 206
+ P S++GH+ G++ G
Sbjct: 218 TFVYPLISGQGISWQGHVGGLVTG 241
>gi|424814495|ref|ZP_18239673.1| uncharacterized membrane protein, rhomboid family [Candidatus
Nanosalina sp. J07AB43]
gi|339758111|gb|EGQ43368.1| uncharacterized membrane protein, rhomboid family [Candidatus
Nanosalina sp. J07AB43]
Length = 335
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 27/131 (20%)
Query: 16 LYQVLSVGFHLIP--------PGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQR 67
++ + GF L P LT TL Y +L QPW GI T++
Sbjct: 120 IFDTVKYGFMLFPNLTPQALSQNPLTEAAATTLGYDPTLLTQPW---GIA----TVM--- 169
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
L HG +HL+ NM + G LE+ GS + + + S+ Y++ +
Sbjct: 170 ---------LAHGGLLHLFANMATFYFFGSALEKAIGSKKLLKFYIGTGLIASIAYILFN 220
Query: 128 YVIYLMNHDVT 138
++YL+ + T
Sbjct: 221 NLLYLIPYTAT 231
>gi|126438092|ref|YP_001073783.1| rhomboid family protein [Mycobacterium sp. JLS]
gi|126237892|gb|ABO01293.1| Rhomboid family protein [Mycobacterium sp. JLS]
Length = 289
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 21/144 (14%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
++ RL SA H MHL +NM +L V G LE G ++F L + + SV L
Sbjct: 114 EWYRLATSAFLHYGAMHLLFNMWALYVVGPPLEMWLGRLRFGALYALSALGGSV----LV 169
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVII 187
Y++ +N G +F V + LN + + A I ++
Sbjct: 170 YLLSPINAATAGASGAVFGLFGAMF------------VVARKLNLDIRGIAAIIILNLVF 217
Query: 188 HLMVP-----NASFKGHLSGILVG 206
+ P S++GH+ G++ G
Sbjct: 218 TFVYPLISGQGISWQGHVGGLVTG 241
>gi|365875578|ref|ZP_09415106.1| hypothetical protein EAAG1_04857 [Elizabethkingia anophelis Ag1]
gi|442588843|ref|ZP_21007653.1| hypothetical protein D505_13495 [Elizabethkingia anophelis R26]
gi|365756837|gb|EHM98748.1| hypothetical protein EAAG1_04857 [Elizabethkingia anophelis Ag1]
gi|442561601|gb|ELR78826.1| hypothetical protein D505_13495 [Elizabethkingia anophelis R26]
Length = 221
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 26/183 (14%)
Query: 62 TILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSV 121
I ++Y RL+ S H D MHL +NM++L + FG V FV++ II+ +
Sbjct: 37 AIQRNKEYIRLLTSGFLHADIMHLLFNMLTLFFFSGIVIDYFGKVGFVLIYFGAIIAGN- 95
Query: 122 CYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVY--A 179
+ S IY N+ + + G S +LF+ I + + +P A
Sbjct: 96 ---LFSLFIY-KNNPMYSAIGASGGVSGILFA--AIAMNPYLGIGFFFIPIPIPGYIFGA 149
Query: 180 PWIELVIIHLMVP----NASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRVVNTLTNV 235
+ + ++ P N HL G +VGL Y +S +NTL ++
Sbjct: 150 LYFGYSVYMMLNPKEWDNLGHAAHLGGSVVGLVYA-------------FISFPMNTLEHI 196
Query: 236 FKL 238
F++
Sbjct: 197 FQI 199
>gi|283457103|ref|YP_003361666.1| membrane protein [Rothia mucilaginosa DY-18]
gi|283133081|dbj|BAI63846.1| uncharacterized membrane protein [Rothia mucilaginosa DY-18]
Length = 303
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 31 TLTLILIQTLLY-IMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEH--GDDMHLYY 87
T TLILI +Y + ++ W + + + +Y RL+ H D MHL +
Sbjct: 109 TYTLILINVAMYGLQQIIPNRW-MVNHGMMWWPYVQHGEYYRLISYGFLHSQNDPMHLVW 167
Query: 88 NMVSLIVKGRELERMFGSVQFVVL 111
NM+ L + G LERM G +F+V+
Sbjct: 168 NMIYLFIFGVSLERMMGRWKFLVV 191
>gi|219887989|gb|ACL54369.1| unknown [Zea mays]
Length = 236
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 88 NMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGF 147
+++ L++ G+ LE ++GS + + + +STS C M + V+Y + LY GF
Sbjct: 4 SIIGLLLFGKLLEPLWGSKELSKFIFIVNLSTSACVFMTAIVLYYITQQEIYLYTPFSGF 63
Query: 148 SAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWI 182
VL + + PD Q LN V + A WI
Sbjct: 64 YGVLSGLLVGIKQLLPD---QELNLFVLKIKAKWI 95
>gi|225560885|gb|EEH09166.1| rhomboid protein [Ajellomyces capsulatus G186AR]
Length = 895
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 22/207 (10%)
Query: 79 HGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL-VSFLIISTSVCYVMLSYVIYLMNHDV 137
H H +N+++L E G++ V L + L + Y++ VI N
Sbjct: 73 HNGLFHTIWNVLALTPLLERFEAEHGTLTSVALFIGPLSTLPAGLYLLFEKVILRGN--- 129
Query: 138 TELYQCAIGFSAVLF---SMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPN 193
A+G S +F ++ I+T Q+ H ++ + +P P ++++ ++PN
Sbjct: 130 ----TTALGSSVWIFLLLGIEAIKTFQTNP--HFVIGIYRIPTWTTPLFLIILVFALIPN 183
Query: 194 ASFKGHLSGILVGLCYTETSLGRLV--ERSGRSVSRVVNTLTNVFKLDDDCNGDDEDSDT 251
S GHLSG+ VG + L LV E+ R + R +N L +L + D + +
Sbjct: 184 TSLLGHLSGLAVGYIFGLGYLKFLVPPEKILRWIERKLNLLA---RLPHYVSVDQKTYGS 240
Query: 252 SASFL---DFTDNTKNDAATIVSASSR 275
A L +F N + A +S R
Sbjct: 241 PAIRLATSEFNSNMRTHPACTISLRPR 267
>gi|328875515|gb|EGG23879.1| hypothetical protein DFA_06017 [Dictyostelium fasciculatum]
Length = 206
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
Y R + S H + +HL N +SL + R LE+ G Q+V F+++S+++ +
Sbjct: 47 QYWRFISSTFTHINLVHLALNSISL-WQLRFLEQSIGLYQYVKYSFFILLSSNLMMMFFI 105
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVII 187
++ + + + IG+S V F + T + L++F + + + L+
Sbjct: 106 SIVNIQRPTLNLKDRNYIGYSCVCFGLSTY---------YSLIHFGFSNL-SIFTSLLFT 155
Query: 188 HLMVPNASFKGHL 200
++ PNASF GHL
Sbjct: 156 QILFPNASFIGHL 168
>gi|88800271|ref|ZP_01115838.1| hypothetical protein MED297_14685 [Reinekea blandensis MED297]
gi|88776986|gb|EAR08194.1| hypothetical protein MED297_14685 [Reinekea sp. MED297]
Length = 209
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 17/93 (18%)
Query: 37 IQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKG 96
IQ+L Y + PW G + RL S H MHL +N VS + G
Sbjct: 39 IQSL-YWLGANFSPWVDAG------------QWWRLGTSIFVHFGLMHLVFNSVSTLFLG 85
Query: 97 RELERMFGSVQFVVLVSFLIISTSVCYVMLSYV 129
R LE + G V F+V + ++T +C M SYV
Sbjct: 86 RFLEPLLGHVAFIV----VFLTTGLCASMASYV 114
>gi|429758897|ref|ZP_19291409.1| peptidase, S54 family [Actinomyces sp. oral taxon 181 str. F0379]
gi|429172593|gb|EKY14141.1| peptidase, S54 family [Actinomyces sp. oral taxon 181 str. F0379]
Length = 264
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 11/157 (7%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
R++ +A H + MH+ +NMVSL GR LE G + L +L+ + +L +V+
Sbjct: 89 RILTTAFLHVNLMHIAFNMVSLYAIGRALEPALGRGPYFCL--YLLSALGGTLGVLGWVL 146
Query: 131 YLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLM 190
D + +G S +F + S V + V AV ++ +
Sbjct: 147 I----DPSSALTVTVGASGAIFGLF-----GSVFVLQRAAGIDVRAVVGLLAVNLLYGFI 197
Query: 191 VPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSR 227
V S++ HL G+L G+ T L RSG + +
Sbjct: 198 VSGVSWQAHLGGLLFGMLATWGMLALGKPRSGMTAKK 234
>gi|168004597|ref|XP_001754998.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694102|gb|EDQ80452.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 313
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 58/143 (40%), Gaps = 30/143 (20%)
Query: 88 NMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGF 147
++V+L++ G+ LE +GS +FV ++F+ + T +L+ +Y ++ LY GF
Sbjct: 77 SIVALLLAGKHLEPFWGSKEFVKFIAFVNLFTCASTFVLAIFLYFISRQGNYLYAPISGF 136
Query: 148 SAV----LFSMKTI-----------RTRQSPDV--------------THQLLNFSVPAVY 178
V L ++K I R + SP V Q + F V Y
Sbjct: 137 HGVVAGFLVAVKQIIPEQEIPALKLRVKWSPSVFVAFAILSSLFSPEPMQFVPFVVFGTY 196
Query: 179 APWIELVIIHLMVPNASFKGHLS 201
W+ L P A KG S
Sbjct: 197 GAWMYLRYFQ-QKPEAGLKGDFS 218
>gi|441649975|ref|XP_003276709.2| PREDICTED: rhomboid domain-containing protein 2 [Nomascus
leucogenys]
Length = 248
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 15/167 (8%)
Query: 46 VLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
+L P G+ + + + N + Y RLV + + + L + + ER G+
Sbjct: 83 LLQPPLAPSGLTLKSEALRNWQVY-RLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGT 141
Query: 106 VQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-----AIGFSAVLFSMKTIRTR 160
V+ +V + + S +I+L V+ L + A GF+ V F+M + T
Sbjct: 142 VRHCFF--------TVIFAIFSAIIFLSFEAVSSLSKLGEVEDARGFTPVAFAMLGVTTV 193
Query: 161 QSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGL 207
+S + VP+V PW+ L+ ++P SF ++ G+ +GL
Sbjct: 194 RSRMRRALVFGMVVPSVLVPWL-LLGASWLIPQTSFLSNVCGLSIGL 239
>gi|325000791|ref|ZP_08121903.1| serine peptidase [Pseudonocardia sp. P1]
Length = 254
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 23/187 (12%)
Query: 33 TLILIQTLLYIMNV-----LAQPWDSLGICISAHTILNQRDYK--RLVLSALEHGDDMHL 85
LI + ++++ V L + +DS + A T ++ D + RLV + H +HL
Sbjct: 47 ALIAVNVAVFVLTVVTAGSLNRNFDSPLFGLGALTPVDVADGQLWRLVTAGFLHIGPLHL 106
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAI 145
+NM +L V GRE+E + G +F + ++ S ++LS + ++
Sbjct: 107 AFNMFALWVIGREVEAVLGRARFTAVYGVSLLGGSAAVMLLSNPLGPTAGASGAVF---- 162
Query: 146 GFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILV 205
G LF + + V V A+ V+I + S++GHL G++
Sbjct: 163 GLMGALFVLLRRLRLPAGQV------IGVIAIN------VVISFTLQGISWQGHLGGLVF 210
Query: 206 GLCYTET 212
G T
Sbjct: 211 GAAVTAA 217
>gi|374601161|ref|ZP_09674163.1| Rhomboid family protein [Myroides odoratus DSM 2801]
gi|423326297|ref|ZP_17304136.1| hypothetical protein HMPREF9716_03493 [Myroides odoratimimus CIP
103059]
gi|373912631|gb|EHQ44480.1| Rhomboid family protein [Myroides odoratus DSM 2801]
gi|404604019|gb|EKB03664.1| hypothetical protein HMPREF9716_03493 [Myroides odoratimimus CIP
103059]
Length = 211
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 14/147 (9%)
Query: 70 KRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYV 129
K + LS L HG HL N + L V L + + VL+S I+S + +++ +
Sbjct: 62 KGIFLSPLFHGSLSHLSSNTIPLFVLSVLLFLFYKKQAYSVLISGWILSGVLLWLLPDF- 120
Query: 130 IYLMNHDVTELYQCAIGFSAVLFSMKT------IRTRQSPDVTHQLLNFSVPAVYAPWIE 183
N+ +++ C IG S +++ + T I RQ V L++ V +Y I
Sbjct: 121 ----NYLQHQVHSCHIGASGLIYLLATFLCFSGIFLRQ---VVLILISILVAVLYGGLIY 173
Query: 184 LVIIHLMVPNASFKGHLSGILVGLCYT 210
+ HL+ + S++GHL G LVG Y
Sbjct: 174 AIFPHLVGDDVSWQGHLIGTLVGFFYA 200
>gi|414591060|tpg|DAA41631.1| TPA: transmembrane protein 115 [Zea mays]
Length = 375
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 88 NMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGF 147
+++ L++ G+ LE ++GS + + + +STS C M + V+Y + LY GF
Sbjct: 143 SIIGLLLFGKLLEPLWGSKELSKFIFIVNLSTSACVFMTAIVLYYITQQEIYLYTPFSGF 202
Query: 148 SAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWI 182
VL + + PD Q LN V + A WI
Sbjct: 203 YGVLSGLLVGIKQLLPD---QELNLFVLKIKAKWI 234
>gi|149174671|ref|ZP_01853296.1| probable glpG protein [Planctomyces maris DSM 8797]
gi|148846365|gb|EDL60703.1| probable glpG protein [Planctomyces maris DSM 8797]
Length = 420
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
++ R+++S HGD +HL +N +++ GR +E + ++ V +FL+++T V +
Sbjct: 83 EWWRILISGFHHGDVLHLLFNCLAIGFFGRLIEPV---MKHWVYAAFLLLATYVSLL--- 136
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVII 187
Y + H L A +L ++ I + T + +N+ + W+ L I
Sbjct: 137 -PEYFLEHYPVGLSGGAFAMFGLLMLLRRIHPEIAEVFTEREINWGL-----GWLILCFI 190
Query: 188 --HLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRVVNTLTNVFKLDD 240
H + N + H++G + G+ + R SR TL +F L
Sbjct: 191 LTHFGIMNIANAAHVTGFVYGILAGAVLINR---------SRFAGTLRFLFVLSQ 236
>gi|146162537|ref|XP_001009676.2| Rhomboid family protein [Tetrahymena thermophila]
gi|146146309|gb|EAR89431.2| Rhomboid family protein [Tetrahymena thermophila SB210]
Length = 239
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 65/162 (40%), Gaps = 20/162 (12%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCY 123
+NQ Y L + H + MHL NM+ L G+ +E FGS L
Sbjct: 90 INQHRYHTLATYSFAHTNLMHLGANMIGLYFFGKFIENQFGSRALAKLY--------FGG 141
Query: 124 VMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIE 183
+L + L++ Q IG SA + ++ T T P +T +PA W+
Sbjct: 142 ALLGGIFILLDLYKKRSNQIHIGASASISAIVTNFTLNFPRLTVYFFFIPMPA----WVL 197
Query: 184 LVIIHLMV-------PNASFKGHLSGILV-GLCYTETSLGRL 217
++I L + S +GHL GI+ GL Y GR
Sbjct: 198 GILILLQSVVFYGDNGSVSHQGHLGGIVFGGLSYFLMKKGRF 239
>gi|407985614|ref|ZP_11166204.1| rhomboid family protein [Mycobacterium hassiacum DSM 44199]
gi|407372772|gb|EKF21798.1| rhomboid family protein [Mycobacterium hassiacum DSM 44199]
Length = 221
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 18/171 (10%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMV 90
T T I I +++++ + AQ + L + S Q + RL+ S H +HL +NM
Sbjct: 67 TYTFIAISVVMFVVQLAAQDVERLLVLNSLAVADGQ--WYRLLTSTFLHFGPVHLLFNMW 124
Query: 91 SLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAV 150
+L V G LE G ++F L + SV L Y++ +N G
Sbjct: 125 ALYVVGPPLESALGRLRFTALYLAGALGGSV----LVYLLAPLNAATAGASGAVFG---- 176
Query: 151 LFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLS 201
LF+ + R+ LN V V A + ++I VP S++GH+
Sbjct: 177 LFAATLVIGRR--------LNLDVRWVLALIVINLVITFSVPGISWQGHIG 219
>gi|320162418|ref|YP_004175643.1| rhomboid family protein [Anaerolinea thermophila UNI-1]
gi|319996272|dbj|BAJ65043.1| rhomboid family protein [Anaerolinea thermophila UNI-1]
Length = 258
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 25/185 (13%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDS----LGICISAHTILNQRDYKRLVLSALEHGDDMHLY 86
T L+ + +Y++ +L++P L + ++T++ Q ++ RL+ H H+
Sbjct: 39 TYILLGVTVGVYLLQMLSRPLFGYDLLLAMGAKSNTLIQQGEFWRLITPMFLHVSLPHIA 98
Query: 87 YNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIG 146
+NM +L G LER +G +F++L + I + V+LSY++ N + G
Sbjct: 99 FNMYALYAFGVSLERHYGRRRFLLL--YFI--GGLGGVVLSYLLSPEN---------SAG 145
Query: 147 FSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHL-----MVPNASFKGHLS 201
S LF + ++ + + F AV A W + II + + P GHL
Sbjct: 146 ASTALFG---VVAAEAVFLYYNRRWFGKEAVSALWNTVFIIGINLVLGLSPGIDNWGHLG 202
Query: 202 GILVG 206
G++ G
Sbjct: 203 GLIAG 207
>gi|226497368|ref|NP_001149820.1| LOC100283447 [Zea mays]
gi|195634867|gb|ACG36902.1| transmembrane protein 115 [Zea mays]
Length = 313
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 88 NMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGF 147
+++ L++ G+ LE ++GS + + + +STS C M + V+Y + LY GF
Sbjct: 81 SIIGLLLFGKLLEPLWGSKELSKFIFIVNLSTSACVFMTAIVLYYITQQEIYLYTPFSGF 140
Query: 148 SAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWI 182
VL + + PD Q LN V + A WI
Sbjct: 141 YGVLSGLLVGIKQLLPD---QELNLFVLKIKAKWI 172
>gi|330798987|ref|XP_003287530.1| hypothetical protein DICPUDRAFT_78374 [Dictyostelium purpureum]
gi|325082476|gb|EGC35957.1| hypothetical protein DICPUDRAFT_78374 [Dictyostelium purpureum]
Length = 196
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 77/153 (50%), Gaps = 12/153 (7%)
Query: 58 ISAH--TILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFL 115
IS H I+N++ + R++ S+ H + +H +N +S I +E+E + GS + + L
Sbjct: 44 ISFHYNEIINKKQFWRIIFSSFSHLNFIHFIFNSIS-IWSSKEIEVVKGSYYYFICTILL 102
Query: 116 IISTSVCYVMLSYVIYLMNHDVTELY---QCAIGFSAVLFSMKTIRTRQSPDVTHQLLNF 172
++ T++ +++ Y+ N +G+S + F + + R +++++F
Sbjct: 103 VLFTNILFLLELYIFKKANGKQNPQLGENNHYLGYSCIAFGLMVVNIRLISLNGNEIISF 162
Query: 173 SVPAVYAPWIELVIIHLMVPNASFKGHLSGILV 205
P++ L+ +++ ++S GHL+GI V
Sbjct: 163 ------LPFLSLLYSSIIIKSSSIIGHLNGITV 189
>gi|160892518|ref|ZP_02073308.1| hypothetical protein CLOL250_00047 [Clostridium sp. L2-50]
gi|156865559|gb|EDO58990.1| peptidase, S54 family [Clostridium sp. L2-50]
Length = 338
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
+L ++ Y RL+ S H HL NMV LI G +E + G V+++ + F I SVC
Sbjct: 184 VLVEKQYYRLLTSMFFHFSLTHLLSNMVVLIALGARVEYLLGKVKYICVYLFCGIVASVC 243
Query: 123 YVMLSYV 129
++ Y+
Sbjct: 244 SIVSCYM 250
>gi|449303984|gb|EMC99991.1| hypothetical protein BAUCODRAFT_30429 [Baudoinia compniacensis UAMH
10762]
Length = 286
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 77/187 (41%), Gaps = 14/187 (7%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLY 86
+P T ++ + T Y+ ++ A G I L+ RL H + +H
Sbjct: 31 LPLATRAVLFLLTAFYVAHLFAPALTHWGALIPQEIRLD--TLYRLNTYPFLHRNILHFA 88
Query: 87 YNMVSLIVKGRELERMFGSV-QFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAI 145
N +L+ E G+V F++ Y +L ++ +N A+
Sbjct: 89 LNCFALLPLLERFEAEHGTVVTFILFTGMFGTLPGSLYTLLERYVFHLN-------GAAV 141
Query: 146 GFSAVLF---SMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSG 202
G S +F + + ++T +S + +L +P P +++I+ +VP+ SF GH+ G
Sbjct: 142 GASVWVFLLLANEAVKTYRS-NPYFELAGVKIPTWTTPIFFILVINFLVPHTSFLGHMCG 200
Query: 203 ILVGLCY 209
VG +
Sbjct: 201 AAVGYLW 207
>gi|410657229|ref|YP_006909600.1| GlpG protein (membrane protein of glp regulon) [Dehalobacter sp.
DCA]
gi|410660265|ref|YP_006912636.1| Rhomboid-like protein [Dehalobacter sp. CF]
gi|409019584|gb|AFV01615.1| GlpG protein (membrane protein of glp regulon) [Dehalobacter sp.
DCA]
gi|409022621|gb|AFV04651.1| Rhomboid-like protein [Dehalobacter sp. CF]
Length = 203
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 31 TLTLILIQTLLYIMNVLA----QPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLY 86
T L+LI +++++ LA P+ + +T+++ Y RL+ S H HL
Sbjct: 19 TYLLVLINVVVFLVMELAGGTQNPYVLIFFGAKMNTLIDAGQYWRLLTSMFIHIGFTHLL 78
Query: 87 YNMVSLIVKGRELERMFGSVQFVVLVSF 114
+N+ +LIV G+ ER+FG +F+++ F
Sbjct: 79 FNVYALIVLGKLAERLFGHGRFLLIYLF 106
>gi|315506838|ref|YP_004085725.1| rhomboid family protein [Micromonospora sp. L5]
gi|315413457|gb|ADU11574.1| Rhomboid family protein [Micromonospora sp. L5]
Length = 298
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 58/140 (41%), Gaps = 18/140 (12%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
++ RLV + H +HL NM +L V GR LE + G ++F+ L + +V +
Sbjct: 133 EWYRLVTAMFLHYGVLHLLLNMWALWVLGRTLEAVLGPLRFLALYLLAGLGGNVA----A 188
Query: 128 YVIYLMNHDVTELYQCAIG-FSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVI 186
YV N G F+AV M+ + S V ++N I
Sbjct: 189 YVFTEPNRFTAGASTAVFGLFAAVFVIMRRLGRDTSAIVPILVINL-------------I 235
Query: 187 IHLMVPNASFKGHLSGILVG 206
VP+ S GHL G++ G
Sbjct: 236 FTFTVPSISVAGHLGGLVAG 255
>gi|358068283|ref|ZP_09154750.1| hypothetical protein HMPREF9333_01631 [Johnsonella ignava ATCC
51276]
gi|356693542|gb|EHI55216.1| hypothetical protein HMPREF9333_01631 [Johnsonella ignava ATCC
51276]
Length = 206
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 12/148 (8%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
++ ++Y RL+ S H H+ NM+ L + G LER G V++ L+ +LI
Sbjct: 46 VIEGKEYWRLLTSMFMHFGIDHIANNMIVLFMIGDNLERALGHVKY--LIFYLICGIGAN 103
Query: 123 YVMLSYVIYLMNHDVTELYQCAIG--FSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
V L + + N+ V+ A+ +L+++ R R + ++ F V ++Y
Sbjct: 104 IVSLFFEMLTGNYSVSAGASGAVFGVMGGLLWAVIANRGRLEELTSQRMAIFIVLSLYYG 163
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLC 208
+I V NA+ H+ G ++G C
Sbjct: 164 FIS-----TGVDNAA---HVGGAVIGFC 183
>gi|302870601|ref|YP_003839238.1| rhomboid family protein [Micromonospora aurantiaca ATCC 27029]
gi|302573460|gb|ADL49662.1| Rhomboid family protein [Micromonospora aurantiaca ATCC 27029]
Length = 298
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 58/140 (41%), Gaps = 18/140 (12%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
++ RLV + H +HL NM +L V GR LE + G ++F+ L + +V +
Sbjct: 133 EWYRLVTAMFLHYGVLHLLLNMWALWVLGRTLEAVLGPLRFLALYLLAGLGGNVA----A 188
Query: 128 YVIYLMNHDVTELYQCAIG-FSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVI 186
YV N G F+AV M+ + S V ++N I
Sbjct: 189 YVFTEPNRFTAGASTAVFGLFAAVFVIMRRLGRDTSAIVPILVINL-------------I 235
Query: 187 IHLMVPNASFKGHLSGILVG 206
VP+ S GHL G++ G
Sbjct: 236 FTFTVPSISVAGHLGGLVAG 255
>gi|383809416|ref|ZP_09964936.1| peptidase, S54 family [Rothia aeria F0474]
gi|383447768|gb|EID50745.1| peptidase, S54 family [Rothia aeria F0474]
Length = 257
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 30/185 (16%)
Query: 31 TLTLILIQTLLYIMN-VLAQPWDSLGICISAHTILNQRDYKRLVLSALEH--GDDMHLYY 87
T TLI I ++Y++ ++ W A + +Y R + S H D HL
Sbjct: 76 TYTLIGINVVVYLLQWIIPNYWVYNEFAYKADWVAYSHEYYRAITSGFLHSQNDPSHLLL 135
Query: 88 NMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGF 147
NMVSL + G +E+M G+ +++++ I+ S +L E + +G
Sbjct: 136 NMVSLYLFGAAIEKMIGNWRYLLVYLTAILGGSAAVWVL------------EPHAVVVGA 183
Query: 148 SAVLFSMKT------IRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLS 201
S +F + + ++ +V ++ V +Y ++P S++ HL
Sbjct: 184 SGGIFGLMGAYLTIMVALKERDNVRSVMVLIGVNVIYG---------FIMPGISWQAHLG 234
Query: 202 GILVG 206
G + G
Sbjct: 235 GFIAG 239
>gi|68061265|ref|XP_672631.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56489857|emb|CAH94479.1| conserved hypothetical protein [Plasmodium berghei]
Length = 239
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 102/212 (48%), Gaps = 28/212 (13%)
Query: 40 LLYIMNVLA-QPWDSLGICISAHTILNQRDYKRLVLSALEHGD-DMHLYYNMVSLIVKGR 97
L+ I+NV +P D I + A I+ ++ R++ SAL +GD +++ N+ L ++ +
Sbjct: 48 LVMILNVFGLRPED---IALHAKRIIRAFEFYRIITSALFYGDISLYVLTNIYMLYLQSQ 104
Query: 98 ELERMFGSVQFVVL-VSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKT 156
ELE+ GS + + +S + I +++C SY+ Y A+ ++LF+
Sbjct: 105 ELEKSVGSSETLAFYLSQITILSAIC----SYI-------KKPFYSTAL-LKSLLFTNCM 152
Query: 157 IRTRQSPDVTHQLLNFSVPAVYAPWIELV--IIHLMVPNASFKGHLSGILVGLCYTETSL 214
+ ++ + ++ +Y P++ +V I+H AS G L GI+ G Y +++
Sbjct: 153 LNPYNKSNL---IFGINIYNMYLPYLSIVIDILHAQDFKASLSGIL-GIISGYIYYISNI 208
Query: 215 GRLVERSGRSVSRVVNTLTNVFKLDDDCNGDD 246
L+E+ + ++ L N D N D+
Sbjct: 209 -YLLEKCNKKFFKIPQILRNYL---DSFNTDE 236
>gi|258650339|ref|YP_003199495.1| rhomboid family protein [Nakamurella multipartita DSM 44233]
gi|258553564|gb|ACV76506.1| Rhomboid family protein [Nakamurella multipartita DSM 44233]
Length = 292
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 16/139 (11%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
+Y RL+ S HG+ +HL NM+SL G LER+ G + + + ++ SV ++ S
Sbjct: 110 EYWRLLTSGFLHGNLVHLATNMLSLYWLGIPLERILGRGRMLTIYLISLLGASVSVLLFS 169
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVII 187
+ L +Y A+L + + +R P V LN V I
Sbjct: 170 APVSLTIGASGAVYGL---MGALLATFRRLRLDLRPLVVILALN-------------VFI 213
Query: 188 HLMVPNASFKGHLSGILVG 206
P S++GHL G + G
Sbjct: 214 TFSYPGLSWQGHLGGFVAG 232
>gi|440717205|ref|ZP_20897696.1| glpG protein [Rhodopirellula baltica SWK14]
gi|436437672|gb|ELP31290.1| glpG protein [Rhodopirellula baltica SWK14]
Length = 329
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCY 123
+ + + RLV A HG MHL +NM++L G +ER+ GS L S L++S
Sbjct: 184 IKKGEIWRLVTPAFLHGSTMHLVFNMMALFTLGSVVERLHGS---WFLASLLLVSH---- 236
Query: 124 VMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKT---IRTRQSPDVTHQLLNFSV 174
++ ++ ++ D E A+G S +F + IR R P + F+V
Sbjct: 237 -IIGMIVQVVLPDWLE-SPMAVGASGAVFGVFGFIWIRPRFQPSYPVGIPPFNV 288
>gi|329938622|ref|ZP_08288018.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
gi|329302113|gb|EGG46005.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
Length = 303
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 24/146 (16%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
+ Y RL+ + HG H+ +NM+SL G LE+ G +F+ L +L+ + +
Sbjct: 137 EGQYYRLLTAMFLHGGYAHIIFNMLSLWWLGAPLEKALGRARFLAL--YLV--SGLAGSA 192
Query: 126 LSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELV 185
LSY++ N Q ++G S +F + V + LN+ + P I L+
Sbjct: 193 LSYLLAAAN-------QPSLGASGAIFGLFGATA-----VLVRRLNYDM----RPVIALL 236
Query: 186 IIHLMV----PNASFKGHLSGILVGL 207
+I+L++ +++ H+ G++ G+
Sbjct: 237 VINLVLTFGWSGIAWEAHIGGLVAGV 262
>gi|440908443|gb|ELR58457.1| Rhomboid domain-containing protein 2 [Bos grunniens mutus]
Length = 360
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 15/177 (8%)
Query: 41 LYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELE 100
L + L QP G+ + + + N + Y RLV + + + L + + E
Sbjct: 29 LLVSGPLQQPLAPSGLSLRSEALRNWQVY-RLVTYIFVYENPVSLLCGAIVIWRFAGNFE 87
Query: 101 RMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-----AIGFSAVLFSMK 155
R G+V+ F ++ T +C + I+L V+ L + A GF+ V F+M
Sbjct: 88 RTVGTVRHCF---FTVVFTIICAI-----IFLSFEAVSSLSKLGEVEDARGFTPVAFAML 139
Query: 156 TIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYTET 212
+ +S + VP++ PW+ L+ ++P SF ++ G+ +GL Y T
Sbjct: 140 GVNCVRSRMRRALVFGVVVPSLLVPWL-LLCASWLIPQTSFLSNVCGLGIGLAYGLT 195
>gi|123438806|ref|XP_001310181.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
gi|121891940|gb|EAX97251.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
Length = 250
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 70/166 (42%), Gaps = 13/166 (7%)
Query: 96 GRELERMFGSVQFVVLVSFLIISTSVCYVMLSYV------IYLMNHDVTELYQCAIGFSA 149
G +LE G FV+ + L I CY + + + N+ + + ++ SA
Sbjct: 75 GNDLENKVGHFGFVIHLFILSILIGACYTVGALLTISIDSFKTFNYPIFGTFSLSMAISA 134
Query: 150 VLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
+ + R + + H VP P + L + H+ +P A + +G+LVG+ Y
Sbjct: 135 IDVYITDHRYKSVFGIIH------VPTKLYPLVMLCLYHIALPEACYLSSFAGLLVGILY 188
Query: 210 TETSLGRLVERSGRSVSRVVNTLTNVFKLDDDCNGDDEDSDTSASF 255
T ++S R ++ ++++++ D + D ++ A F
Sbjct: 189 AITYFQPPPKKSDRMSNKPSPYVSSLYQ-DHELGADSANNLPFALF 233
>gi|212692209|ref|ZP_03300337.1| hypothetical protein BACDOR_01705 [Bacteroides dorei DSM 17855]
gi|212665086|gb|EEB25658.1| peptidase, S54 family [Bacteroides dorei DSM 17855]
Length = 225
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPW-----DSLGICISAHTILNQRDYKRLVLSALEHGD 81
IP T L++I L + V+A + D LG+ + N +L+ HG
Sbjct: 4 IPTVTKNLLIINVLCFFGGVVAMKYGINLNDLLGLHFFMASDFNP---AQLITYMFMHGG 60
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
H+++NM +L + GR LE+++G +F+ I + ++ Y+ Y VTEL
Sbjct: 61 FQHIFFNMFALWMFGRTLEQVWGPKRFLFYYMVCGIGAGLVQELVQYIQY-----VTELS 115
Query: 142 Q 142
Q
Sbjct: 116 Q 116
>gi|305666512|ref|YP_003862799.1| putative transmembrane rhomboid family protein [Maribacter sp.
HTCC2170]
gi|88708779|gb|EAR01014.1| putative transmembrane rhomboid family protein [Maribacter sp.
HTCC2170]
Length = 291
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 79 HGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVT 138
H H+++NM+ L GR +F +F+ V FL + + M+SY ++ V
Sbjct: 71 HAGLGHIFWNMLVLYFVGRIFLNLFNGKRFLN-VYFLGVILGGLFFMVSYNVFPAFFKVN 129
Query: 139 ELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVY-APWI---ELVIIHLMV-PN 193
IG SA + ++ P+ +L+ F++ Y +I +LV + + + P
Sbjct: 130 A---ALIGASAGVRAILIFICAYIPNQEVRLIVFNIKLWYIGAFIVLTDLVQLSMGINPG 186
Query: 194 ASFKGHLSGILVGLCYTETSL-GRLVERSGRSVSRVVNTLTNVFK 237
F HL G L+G Y L G+ + G SR+V+++ N+FK
Sbjct: 187 GQF-AHLGGALLGYVYARQLLKGKDI---GEGFSRIVDSIANLFK 227
>gi|237711514|ref|ZP_04541995.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265752939|ref|ZP_06088508.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|345514023|ref|ZP_08793537.1| hypothetical protein BSEG_02055 [Bacteroides dorei 5_1_36/D4]
gi|423230808|ref|ZP_17217212.1| hypothetical protein HMPREF1063_03032 [Bacteroides dorei
CL02T00C15]
gi|423240560|ref|ZP_17221674.1| hypothetical protein HMPREF1065_02297 [Bacteroides dorei
CL03T12C01]
gi|423244519|ref|ZP_17225594.1| hypothetical protein HMPREF1064_01800 [Bacteroides dorei
CL02T12C06]
gi|229435837|gb|EEO45914.1| hypothetical protein BSEG_02055 [Bacteroides dorei 5_1_36/D4]
gi|229454209|gb|EEO59930.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263236125|gb|EEZ21620.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|392630458|gb|EIY24451.1| hypothetical protein HMPREF1063_03032 [Bacteroides dorei
CL02T00C15]
gi|392642093|gb|EIY35865.1| hypothetical protein HMPREF1064_01800 [Bacteroides dorei
CL02T12C06]
gi|392643522|gb|EIY37271.1| hypothetical protein HMPREF1065_02297 [Bacteroides dorei
CL03T12C01]
Length = 225
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPW-----DSLGICISAHTILNQRDYKRLVLSALEHGD 81
IP T L++I L + V+A + D LG+ + N +L+ HG
Sbjct: 4 IPTVTKNLLIINVLCFFGGVVAMKYGINLNDLLGLHFFMASDFNP---AQLITYMFMHGG 60
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
H+++NM +L + GR LE+++G +F+ I + ++ Y+ Y VTEL
Sbjct: 61 FQHIFFNMFALWMFGRTLEQVWGPKRFLFYYMVCGIGAGLVQELVQYIQY-----VTELS 115
Query: 142 Q 142
Q
Sbjct: 116 Q 116
>gi|383759255|ref|YP_005438240.1| putative S54 family peptidase [Rubrivivax gelatinosus IL144]
gi|381379924|dbj|BAL96741.1| putative S54 family peptidase [Rubrivivax gelatinosus IL144]
Length = 198
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQR-DYKRLVLSALEHGDDMHL 85
+PP T TLILI T ++ + +L + ++ + + ++V A HG HL
Sbjct: 4 LPPVTKTLILICTAVFCLQTFVP--QTLTMWLALWPVGSGLFGPWQVVTYAFLHGGLFHL 61
Query: 86 YYNMVSLIVKGRELERMFGSVQFV 109
++NM+ L + G ELER++G +++
Sbjct: 62 FFNMLGLWMFGSELERVWGQKRYL 85
>gi|330818616|ref|YP_004362321.1| Rhomboid-like protein [Burkholderia gladioli BSR3]
gi|327371009|gb|AEA62365.1| Rhomboid-like protein [Burkholderia gladioli BSR3]
Length = 553
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
D+ RL+ S+ EH +HL N++ L G ER++GS +F+ L F + S+ V+
Sbjct: 217 DWWRLLTSSFEHFGALHLAVNLLVLARFGPLAERLYGSFRFLSLYLFAGVIASMASVLW- 275
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSM 154
+ QCA G S + +
Sbjct: 276 -----------DPMQCAAGASGAILGV 291
>gi|358010724|ref|ZP_09142534.1| hypothetical protein AP8-3_04340 [Acinetobacter sp. P8-3-8]
Length = 205
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 59/156 (37%), Gaps = 43/156 (27%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMF----GSVQFVVLVSFLIIST 119
+ Q Y R + H D MHL++NM +L GR +E F + FV+ II
Sbjct: 38 IKQGQYDRFLTHGFIHNDGMHLFFNMFTLYFFGRSIEWFFRDYLSGMGFVLFYCSAIIVA 97
Query: 120 SVCYVMLSYVIYLMNHDVTELYQC----AIGFSAVLF----------------------- 152
++ SY+ Y + L A+ FSA+LF
Sbjct: 98 AIP----SYIQYRNLNSYRSLGASGAVNAVLFSAILFDPWGMIYIYFIPIPAIIFGTIYL 153
Query: 153 --SMKTIRTRQSPDVTHQ------LLNFSVPAVYAP 180
SM IR+ SP + H+ + F P + AP
Sbjct: 154 CYSMYAIRSGHSPLIDHRAHITGAVYGFLFPLLLAP 189
>gi|333376122|ref|ZP_08467914.1| rhomboid family protein [Kingella kingae ATCC 23330]
gi|332968857|gb|EGK07904.1| rhomboid family protein [Kingella kingae ATCC 23330]
Length = 221
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL 111
+ Y+RL+ SA H D HL++N+ +L R + ++G + F++L
Sbjct: 42 NKQYQRLITSAFLHADGWHLFFNLFTLYFFSRVIAYIYGWLGFLLL 87
>gi|320533147|ref|ZP_08033872.1| peptidase, S54 family protein [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320134642|gb|EFW26865.1| peptidase, S54 family protein [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 215
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Query: 52 DSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQF--V 109
SL + + ++ ++ R + +A H D MH+ +NM++L V GR LE + G +F +
Sbjct: 31 QSLELRLGFMPVVAAQEPWRFLTTAFLHADYMHIGFNMLTLWVLGRTLEPLLGRWRFTSI 90
Query: 110 VLVSFLIISTSVCYVMLSYVIYLMNHDVTELY-QCAIGFSAVLFSM 154
L+S L ST +IY ++ TE + +G S +F +
Sbjct: 91 YLLSALGGST---------MIYWLSWPGTESWLTLTVGASGAVFGL 127
>gi|329964254|ref|ZP_08301355.1| peptidase, S54 family [Bacteroides fluxus YIT 12057]
gi|328525559|gb|EGF52602.1| peptidase, S54 family [Bacteroides fluxus YIT 12057]
Length = 227
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWD-SLGICISAHTIL-NQRDYKRLVLSALEHGDDMH 84
IP T L++I L+Y+ ++AQ + L + H L + + +L+ HG H
Sbjct: 4 IPTVTKNLLIINVLMYMGTIVAQRYGIDLAEYLGLHFFLADNFNAAQLITYMFMHGSFTH 63
Query: 85 LYYNMVSLIVKGRELERMFGSVQFV 109
+++NM ++ + GR LE+++G +F+
Sbjct: 64 IFFNMFAVWMFGRILEQVWGPKRFL 88
>gi|312086620|ref|XP_003145149.1| hypothetical protein LOAG_09574 [Loa loa]
Length = 121
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 189 LMVPNASFKGHLSGILVGLCYTETSLGRLVE 219
++ PNASF GHLSGI+VGL YT L +V+
Sbjct: 1 MLTPNASFIGHLSGIIVGLAYTMGPLKTVVD 31
>gi|118474503|ref|YP_892056.1| rhomboid family protein [Campylobacter fetus subsp. fetus 82-40]
gi|424820726|ref|ZP_18245764.1| rhomboid family protein [Campylobacter fetus subsp. venerealis NCTC
10354]
gi|118413729|gb|ABK82149.1| rhomboid family protein [Campylobacter fetus subsp. fetus 82-40]
gi|342327505|gb|EGU23989.1| rhomboid family protein [Campylobacter fetus subsp. venerealis NCTC
10354]
Length = 172
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%)
Query: 34 LILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLI 93
LI I ++Y + S I + + + Y +L+ + HG MH+ NM L
Sbjct: 7 LIAINAVVYFLEYFVYNSRSFSIFFGLNELFFEGAYWQLITTMFLHGSLMHILMNMAVLY 66
Query: 94 VKGRELERMFGSVQFVVL 111
G LER GSV+F++L
Sbjct: 67 QFGMLLERYLGSVKFLLL 84
>gi|224537591|ref|ZP_03678130.1| hypothetical protein BACCELL_02471 [Bacteroides cellulosilyticus
DSM 14838]
gi|423226890|ref|ZP_17213355.1| hypothetical protein HMPREF1062_05541 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224520788|gb|EEF89893.1| hypothetical protein BACCELL_02471 [Bacteroides cellulosilyticus
DSM 14838]
gi|392626761|gb|EIY20804.1| hypothetical protein HMPREF1062_05541 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 244
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWD-SLGICISAHTIL-NQRDYKRLVLSALEHGDDMH 84
IP T L++I L+++ ++AQ + L + H L + + +L+ HG H
Sbjct: 4 IPTVTKNLLIINVLVFLATIVAQSYHLDLARYLGLHFFLADDFNVAQLITYMFMHGGFTH 63
Query: 85 LYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYV 129
L++NM ++ + GR LE+++G +F+ I + ++++Y+
Sbjct: 64 LFFNMFAVWMFGRILEQVWGPKRFLSYYMICGIGAGLISMLVTYI 108
>gi|406672776|ref|ZP_11080001.1| hypothetical protein HMPREF9700_00543 [Bergeyella zoohelcum CCUG
30536]
gi|405587320|gb|EKB61048.1| hypothetical protein HMPREF9700_00543 [Bergeyella zoohelcum CCUG
30536]
Length = 243
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 24 FHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYK--RLVLSALEHGD 81
F IPP ++L+ ++ ++ P L ++A+ ++Q D+K +++ HGD
Sbjct: 3 FRNIPPAVKAILLLNAIVSVLTQFLFP--PLKTFLAAYYPMSQ-DFKIWQIITHMFVHGD 59
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFV 109
MH+ +NM++L G LE + G +F+
Sbjct: 60 FMHILFNMLTLFSFGPVLESIMGQKKFI 87
>gi|357390844|ref|YP_004905685.1| putative peptidase S54 family protein [Kitasatospora setae KM-6054]
gi|311897321|dbj|BAJ29729.1| putative peptidase S54 family protein [Kitasatospora setae KM-6054]
Length = 307
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 29/133 (21%)
Query: 50 PWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFV 109
PW+ G+ A L ++ RLV + HG MH+ N+ SL V G +LER+ G +++
Sbjct: 129 PWERHGV---AEGPL---EWYRLVSAQFVHGGLMHIAANVFSLWVLGPQLERVLGRARYL 182
Query: 110 VL----------VSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRT 159
L + +L+ + V S I+ + +G +AVLF + RT
Sbjct: 183 TLYLVSGIAGNALGYLLTGADMWAVGASGAIFGL-----------LGATAVLF--RVTRT 229
Query: 160 RQSPDVTHQLLNF 172
P + ++N
Sbjct: 230 PMQPVIALLVVNL 242
>gi|386712717|ref|YP_006179039.1| S54 family peptidase [Halobacillus halophilus DSM 2266]
gi|384072272|emb|CCG43762.1| S54 family peptidase [Halobacillus halophilus DSM 2266]
Length = 256
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 18/201 (8%)
Query: 29 PGTLTLILIQTLLYIMNVLAQ---PWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHL 85
P TL+ I LL+I+ Q D L I + ++ + +Y RLV H H
Sbjct: 16 PIVSTLVGIHLLLWILIDFLQFGFALDLLRFGIGVNVLILEGEYWRLVTPIFLHAGFAHA 75
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAI 145
+N SL++ G LE++ G +F+ + F I ++ +++N D Y +
Sbjct: 76 LFNSFSLVLFGPALEQILGKFKFIFMYLFAGIVGNLG-------TFIVNPDA---YYQHL 125
Query: 146 GFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILV 205
G S +F + + H + + V +I + + PN + GHL G++
Sbjct: 126 GASGAIFGIFGVYVFMVLFRKHLIDQANSQIVMVIFILGLFMTFTRPNINVLGHLFGLIG 185
Query: 206 GLCYTETSLGRLVERSGRSVS 226
G T L R+ R S
Sbjct: 186 GFAIAPTIL-----RNARPFS 201
>gi|296113687|ref|YP_003627625.1| rhomboid family protein [Moraxella catarrhalis RH4]
gi|416215836|ref|ZP_11623349.1| rhomboid family protein [Moraxella catarrhalis 7169]
gi|416222800|ref|ZP_11626253.1| rhomboid family protein [Moraxella catarrhalis 103P14B1]
gi|416229279|ref|ZP_11627999.1| rhomboid family protein [Moraxella catarrhalis 46P47B1]
gi|416237663|ref|ZP_11631105.1| rhomboid family protein [Moraxella catarrhalis BC1]
gi|416245992|ref|ZP_11634884.1| rhomboid family protein [Moraxella catarrhalis BC8]
gi|416251452|ref|ZP_11637720.1| rhomboid family protein [Moraxella catarrhalis CO72]
gi|416256012|ref|ZP_11639489.1| rhomboid family protein [Moraxella catarrhalis O35E]
gi|295921381|gb|ADG61732.1| rhomboid family protein [Moraxella catarrhalis BBH18]
gi|326562429|gb|EGE12748.1| rhomboid family protein [Moraxella catarrhalis 7169]
gi|326562798|gb|EGE13093.1| rhomboid family protein [Moraxella catarrhalis 46P47B1]
gi|326563482|gb|EGE13745.1| rhomboid family protein [Moraxella catarrhalis 103P14B1]
gi|326569137|gb|EGE19199.1| rhomboid family protein [Moraxella catarrhalis BC1]
gi|326571330|gb|EGE21347.1| rhomboid family protein [Moraxella catarrhalis BC8]
gi|326572975|gb|EGE22954.1| rhomboid family protein [Moraxella catarrhalis CO72]
gi|326574787|gb|EGE24721.1| rhomboid family protein [Moraxella catarrhalis O35E]
Length = 201
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERM----FGSVQFV-VLVSFLIIS 118
+N+ Y RL+ H + MHL +NM +L GR +ER FG++ FV +S +II+
Sbjct: 35 VNKGQYDRLLTHGFIHANGMHLLFNMFTLYFFGRVIERFYIDKFGNLGFVGFYISAIIIA 94
Query: 119 TSVCY 123
Y
Sbjct: 95 MLPTY 99
>gi|433650924|ref|YP_007295926.1| putative membrane protein [Mycobacterium smegmatis JS623]
gi|433300701|gb|AGB26521.1| putative membrane protein [Mycobacterium smegmatis JS623]
Length = 287
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMV 90
T TLI I +++++ ++ S + S D+ RLV SA H HL +NM
Sbjct: 77 TYTLIAINVVMFVLQTVSPNLQSDLVLRSPSVATG--DWYRLVTSAFLHYGIAHLLFNMY 134
Query: 91 SLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
+L + G LE G ++F L + + SV +LS
Sbjct: 135 ALYIMGPSLESWLGRLRFSALYAMSALGGSVLVYLLS 171
>gi|418251560|ref|ZP_12877691.1| rhomboid family protein [Mycobacterium abscessus 47J26]
gi|420934166|ref|ZP_15397439.1| rhomboid family protein [Mycobacterium massiliense 1S-151-0930]
gi|420935691|ref|ZP_15398961.1| rhomboid family protein [Mycobacterium massiliense 1S-152-0914]
gi|420944426|ref|ZP_15407681.1| rhomboid family protein [Mycobacterium massiliense 1S-153-0915]
gi|420949678|ref|ZP_15412927.1| rhomboid family protein [Mycobacterium massiliense 1S-154-0310]
gi|420954531|ref|ZP_15417773.1| rhomboid family protein [Mycobacterium massiliense 2B-0626]
gi|420958705|ref|ZP_15421939.1| rhomboid family protein [Mycobacterium massiliense 2B-0107]
gi|420963609|ref|ZP_15426833.1| rhomboid family protein [Mycobacterium massiliense 2B-1231]
gi|420994639|ref|ZP_15457785.1| rhomboid family protein [Mycobacterium massiliense 2B-0307]
gi|420995600|ref|ZP_15458743.1| rhomboid family protein [Mycobacterium massiliense 2B-0912-R]
gi|421004948|ref|ZP_15468070.1| rhomboid family protein [Mycobacterium massiliense 2B-0912-S]
gi|353448717|gb|EHB97118.1| rhomboid family protein [Mycobacterium abscessus 47J26]
gi|392132578|gb|EIU58323.1| rhomboid family protein [Mycobacterium massiliense 1S-151-0930]
gi|392146032|gb|EIU71756.1| rhomboid family protein [Mycobacterium massiliense 1S-153-0915]
gi|392147198|gb|EIU72919.1| rhomboid family protein [Mycobacterium massiliense 1S-152-0914]
gi|392150719|gb|EIU76432.1| rhomboid family protein [Mycobacterium massiliense 1S-154-0310]
gi|392153444|gb|EIU79151.1| rhomboid family protein [Mycobacterium massiliense 2B-0626]
gi|392180741|gb|EIV06393.1| rhomboid family protein [Mycobacterium massiliense 2B-0307]
gi|392191420|gb|EIV17045.1| rhomboid family protein [Mycobacterium massiliense 2B-0912-R]
gi|392193651|gb|EIV19275.1| rhomboid family protein [Mycobacterium massiliense 2B-0912-S]
gi|392246522|gb|EIV71999.1| rhomboid family protein [Mycobacterium massiliense 2B-1231]
gi|392248431|gb|EIV73907.1| rhomboid family protein [Mycobacterium massiliense 2B-0107]
Length = 232
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 25/146 (17%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
Q + R V + H MH+ NM+SL + G LER FG ++ + ++ +S +
Sbjct: 56 QGELWRTVTTGFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAAMW 115
Query: 126 LS--YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPD--VTHQLLNFSVPAVYAPW 181
LS V+ + + L A+ S +R R +P + LLN
Sbjct: 116 LSPNAVVAGASGAIYGLLGAALVLS--------LRERLNPQTIIIVLLLNIG-------- 159
Query: 182 IELVIIHLMVPNASFKGHLSGILVGL 207
+ + +P S GH+ G+L G+
Sbjct: 160 -----LSISLPGISLAGHMGGLLFGV 180
>gi|389861756|ref|YP_006363995.1| Rhomboid Peptidase S54 [Modestobacter marinus]
gi|388483958|emb|CCH85490.1| Rhomboid Peptidase S54 [Modestobacter marinus]
Length = 246
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
D+ R +A H +HL NM+SL+V G ELER+ G +++V+ I + +L
Sbjct: 89 DWWRPFTAAFLHYGVLHLGLNMLSLLVFGSELERLLGRGRYLVVYLVSIAGGAAAIQLLG 148
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMK 155
+ T +Y F VL K
Sbjct: 149 TPFGQVAGASTAIYGLMGAFGVVLVHQK 176
>gi|416157627|ref|ZP_11605249.1| rhomboid family protein [Moraxella catarrhalis 101P30B1]
gi|416236217|ref|ZP_11630556.1| rhomboid family protein [Moraxella catarrhalis 12P80B1]
gi|421780491|ref|ZP_16216979.1| rhomboid family protein [Moraxella catarrhalis RH4]
gi|326563202|gb|EGE13470.1| rhomboid family protein [Moraxella catarrhalis 12P80B1]
gi|326573790|gb|EGE23747.1| rhomboid family protein [Moraxella catarrhalis 101P30B1]
gi|407812179|gb|EKF82965.1| rhomboid family protein [Moraxella catarrhalis RH4]
Length = 206
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERM----FGSVQFV-VLVSFLIIS 118
+N+ Y RL+ H + MHL +NM +L GR +ER FG++ FV +S +II+
Sbjct: 40 VNKGQYDRLLTHGFIHANGMHLLFNMFTLYFFGRVIERFYIDKFGNLGFVGFYISAIIIA 99
Query: 119 TSVCY 123
Y
Sbjct: 100 MLPTY 104
>gi|366995179|ref|XP_003677353.1| hypothetical protein NCAS_0G01130 [Naumovozyma castellii CBS 4309]
gi|342303222|emb|CCC71000.1| hypothetical protein NCAS_0G01130 [Naumovozyma castellii CBS 4309]
Length = 269
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 12/183 (6%)
Query: 28 PPGTLT--LILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHL 85
PP L L + T LY+++ D + A I + RL L H HL
Sbjct: 13 PPSALATGLAIFLTFLYVLSFFTSINDKWSLGTDA--INSFSSSYRLSTYPLIHLSIFHL 70
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCA- 144
++N+ +I E G+V + ++ + T + Y ++ ++Y C
Sbjct: 71 FFNIAGIIGPLTIFESRHGTVYTGIFLNMSAVITGLLYCIVGQLLYPTVSVAGSSGWCFT 130
Query: 145 -IGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGI 203
G+ AVL S IR R + + F +P + P + L++I +++P +SF GHL G+
Sbjct: 131 FFGYFAVLESH--IRPRYAIGGS----GFGIPTIMTPLVLLLVIAVLIPGSSFWGHLFGL 184
Query: 204 LVG 206
++G
Sbjct: 185 IIG 187
>gi|403285748|ref|XP_003934173.1| PREDICTED: rhomboid domain-containing protein 2 [Saimiri
boliviensis boliviensis]
Length = 364
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 15/172 (8%)
Query: 46 VLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
+L P G+ + + + N + Y RLV + + + L + + ER G+
Sbjct: 38 LLQPPLAPSGLTLKSEALRNWQVY-RLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGT 96
Query: 106 VQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-----AIGFSAVLFSMKTIRTR 160
V+ +V + + S +I+L V+ L + A GF+ V F+M + +
Sbjct: 97 VRHCFF--------TVIFAIFSAIIFLSFEAVSSLSKLGEVEDARGFTPVAFAMLGVTSV 148
Query: 161 QSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYTET 212
+S + VP+V PW+ L+ ++P SF ++ G+ +GL Y T
Sbjct: 149 RSRMRRALVFGMVVPSVLVPWL-LLGASWLIPQTSFLSNVCGLCIGLSYGLT 199
>gi|421036084|ref|ZP_15499101.1| rhomboid family protein [Mycobacterium abscessus 3A-0930-S]
gi|392219936|gb|EIV45460.1| rhomboid family protein [Mycobacterium abscessus 3A-0930-S]
Length = 252
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 25/146 (17%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
Q + R V + H MH+ NM+SL + G LER FG ++ + ++ +S +
Sbjct: 76 QGELWRTVTTGFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAAMW 135
Query: 126 LS--YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPD--VTHQLLNFSVPAVYAPW 181
LS V+ + + L A+ S +R R +P + LLN
Sbjct: 136 LSPNAVVAGASGAIYGLLGAALVLS--------LRERLNPQTIIIVLLLNIG-------- 179
Query: 182 IELVIIHLMVPNASFKGHLSGILVGL 207
+ + +P S GH+ G+L G+
Sbjct: 180 -----LSISLPGISLAGHMGGLLFGV 200
>gi|288916640|ref|ZP_06411015.1| Rhomboid family protein [Frankia sp. EUN1f]
gi|288351895|gb|EFC86097.1| Rhomboid family protein [Frankia sp. EUN1f]
Length = 208
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 53 SLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLV 112
SL +S I Y R V +A HG+ +H+ N+ +L + G +LE + G ++ +
Sbjct: 27 SLDFLLSGVDIAFYDQYYRFVAAAFLHGNFLHILVNLYALFIMGHQLEAVVGRLRLIG-- 84
Query: 113 SFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLF----SMKTIRTRQSPDVTHQ 168
L ++ +V +LSYV V L ++G S +F + I R D T
Sbjct: 85 --LFLAGAVGGNVLSYV-------VNGLETSSLGASTAIFGFFGAFYVIARRMRADTTQI 135
Query: 169 L----LNFSV 174
L LNF++
Sbjct: 136 LILIVLNFAI 145
>gi|417410105|gb|JAA51530.1| Putative rhomboid domain-containing protein 2, partial [Desmodus
rotundus]
Length = 366
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Query: 85 LYYNMVSLIVKG-------RELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDV 137
+Y N VSL+ ER G+V+ +V + ++S +I+L V
Sbjct: 69 VYENPVSLLCGAIIIWRFAGNFERTVGTVRHCFF--------TVIFALISAIIFLSFEAV 120
Query: 138 TELYQC-----AIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVP 192
+ L + A GF+ V F+M + +S +L VP++ PW+ L+ ++P
Sbjct: 121 SSLSKLGEVEDARGFTPVAFAMLGVSAVRSRMRRALVLGVVVPSMLVPWL-LLCASWLIP 179
Query: 193 NASFKGHLSGILVGLCYTET 212
SF ++ G+ VGL Y T
Sbjct: 180 QTSFLSNVCGLGVGLAYGFT 199
>gi|42525643|ref|NP_970741.1| rhomboid [Treponema denticola ATCC 35405]
gi|422340835|ref|ZP_16421776.1| rhomboid family protein [Treponema denticola F0402]
gi|449103871|ref|ZP_21740614.1| hypothetical protein HMPREF9730_01511 [Treponema denticola AL-2]
gi|449106028|ref|ZP_21742720.1| hypothetical protein HMPREF9729_00985 [Treponema denticola ASLM]
gi|449108116|ref|ZP_21744760.1| hypothetical protein HMPREF9722_00456 [Treponema denticola ATCC
33520]
gi|449110633|ref|ZP_21747233.1| hypothetical protein HMPREF9735_00282 [Treponema denticola ATCC
33521]
gi|449114556|ref|ZP_21751033.1| hypothetical protein HMPREF9721_01551 [Treponema denticola ATCC
35404]
gi|449118805|ref|ZP_21755206.1| hypothetical protein HMPREF9725_00671 [Treponema denticola H1-T]
gi|449121194|ref|ZP_21757546.1| hypothetical protein HMPREF9727_00306 [Treponema denticola MYR-T]
gi|449124938|ref|ZP_21761255.1| hypothetical protein HMPREF9723_01299 [Treponema denticola OTK]
gi|449129942|ref|ZP_21766170.1| hypothetical protein HMPREF9724_00835 [Treponema denticola SP37]
gi|451967767|ref|ZP_21920996.1| hypothetical protein HMPREF9728_00162 [Treponema denticola US-Trep]
gi|41815654|gb|AAS10622.1| rhomboid family protein [Treponema denticola ATCC 35405]
gi|325475239|gb|EGC78424.1| rhomboid family protein [Treponema denticola F0402]
gi|448940621|gb|EMB21526.1| hypothetical protein HMPREF9723_01299 [Treponema denticola OTK]
gi|448944577|gb|EMB25455.1| hypothetical protein HMPREF9724_00835 [Treponema denticola SP37]
gi|448951420|gb|EMB32233.1| hypothetical protein HMPREF9727_00306 [Treponema denticola MYR-T]
gi|448951833|gb|EMB32642.1| hypothetical protein HMPREF9725_00671 [Treponema denticola H1-T]
gi|448956181|gb|EMB36943.1| hypothetical protein HMPREF9721_01551 [Treponema denticola ATCC
35404]
gi|448960007|gb|EMB40724.1| hypothetical protein HMPREF9735_00282 [Treponema denticola ATCC
33521]
gi|448961966|gb|EMB42660.1| hypothetical protein HMPREF9722_00456 [Treponema denticola ATCC
33520]
gi|448964324|gb|EMB44996.1| hypothetical protein HMPREF9730_01511 [Treponema denticola AL-2]
gi|448966596|gb|EMB47251.1| hypothetical protein HMPREF9729_00985 [Treponema denticola ASLM]
gi|451703553|gb|EMD57919.1| hypothetical protein HMPREF9728_00162 [Treponema denticola US-Trep]
Length = 209
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
++ + Y + HGD HL +NM++L G +ER G+ +F+ + +L+I T
Sbjct: 47 VVEAQTYWQFFTYQFVHGDFFHLAFNMLALFFFGVPVERKIGTKEFI--LYYLLIGTIGG 104
Query: 123 YVMLSYVIYLMNHDVTELYQCA-IGFSAVLFSMKTIRTRQSPD-VTHQLLNFSVPAV--- 177
+LS+++Y T Y IG S +F + + P+ V + VPA
Sbjct: 105 --ILSFLVY----AATGFYTITLIGASGAIFGVLLLYAVLYPNSVIYIWGVIPVPAPLLI 158
Query: 178 --YAPWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLG----RLVERSGR 223
YA IEL+ I + + H G++ G Y G ++ +GR
Sbjct: 159 LGYAV-IELISIFSIGDGVAHLTHFIGLIAGWVYIRIRFGIKPLKVWNSTGR 209
>gi|20093492|ref|NP_613339.1| membrane serine protease [Methanopyrus kandleri AV19]
gi|19886321|gb|AAM01269.1| Predicted membrane serine protease of the Rhomboid superfamily
[Methanopyrus kandleri AV19]
Length = 210
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 31/140 (22%)
Query: 79 HGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVT 138
H + +HL +NM+ L+ G +LER+ + +F+VL YL++ +
Sbjct: 54 HANLIHLLFNMLGLLTFGVQLERVLSTSEFLVL-------------------YLLSGLMG 94
Query: 139 ELYQCA-------IGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP-----AVYAPWIELVI 186
L Q A +G SA +F + T P L +P +YA VI
Sbjct: 95 GLAQTALTPDVPVVGASAAIFGLLGCLTMLRPMSMMMFLFIPMPLALFAVLYAALALFVI 154
Query: 187 IHLMVPNASFKGHLSGILVG 206
+V + GHL G++VG
Sbjct: 155 QSGVVTQVAHAGHLVGMIVG 174
>gi|417304444|ref|ZP_12091465.1| glpG protein [Rhodopirellula baltica WH47]
gi|327539221|gb|EGF25844.1| glpG protein [Rhodopirellula baltica WH47]
Length = 340
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCY 123
+ + + RLV A HG MHL +NM++L G +ER+ GS L S L++S
Sbjct: 195 IKKGEIWRLVTPAFLHGSTMHLVFNMMALFTLGSVVERLHGS---WFLASLLLVSH---- 247
Query: 124 VMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKT---IRTRQSPDVTHQLLNFSV 174
++ ++ ++ D E A+G S +F + IR R P + F+V
Sbjct: 248 -IIGIIVQVVLPDWLE-SPMAVGASGAVFGVFGFIWIRPRFQPSYPVGIPPFNV 299
>gi|325089170|gb|EGC42480.1| rhomboid protein [Ajellomyces capsulatus H88]
Length = 853
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 22/207 (10%)
Query: 79 HGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL-VSFLIISTSVCYVMLSYVIYLMNHDV 137
H H +N+++L E G++ V L + L + Y++ VI N
Sbjct: 73 HNGLFHTIWNVLALTPLLERFEAEHGTLTSVALFIGPLSTLPAGLYLLFEKVILRGN--- 129
Query: 138 TELYQCAIGFSAVLF---SMKTIRTRQSPDVTHQLLN-FSVPAVYAPWIELVIIHLMVPN 193
A+G S +F ++ I+T Q+ H ++ + +P P ++++ ++PN
Sbjct: 130 ----TTALGSSVWIFLLLGIEAIKTFQT--NPHFVIGIYRIPTWTTPLFLIILVFALIPN 183
Query: 194 ASFKGHLSGILVGLCYTETSLGRLV--ERSGRSVSRVVNTLTNVFKLDDDCNGDDEDSDT 251
S GHLSG+ VG + L LV E+ R + R +N L +L + D + +
Sbjct: 184 TSLLGHLSGLAVGYIFGLGYLKFLVPPEKILRWIERKLNLLA---RLPHYVSVDQKTYGS 240
Query: 252 SASFL---DFTDNTKNDAATIVSASSR 275
A L +F N + A +S R
Sbjct: 241 PAIQLATSEFNSNMRTHPACTISLRPR 267
>gi|406885514|gb|EKD32686.1| hypothetical protein ACD_77C00001G0004 [uncultured bacterium]
Length = 226
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 24 FHLIPPGTLTLILIQTLLYIMNVLAQP--WDSLGICISAHTILNQRDYKRLVLSALEHGD 81
F+ +PP L++I L+ ++ A ++ + + R Y + V HG+
Sbjct: 10 FNSMPPVIKNLVIINGLMLLITFFAGNFMYEKFSLFYFGSELF--RPY-QFVTHMFMHGN 66
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFVV 110
+HL++NM SLI+ G LE+++GS +F +
Sbjct: 67 FIHLFFNMYSLIIFGVVLEQVWGSKKFFI 95
>gi|114799025|ref|YP_759062.1| S54 family peptidase [Hyphomonas neptunium ATCC 15444]
gi|114739199|gb|ABI77324.1| peptidase, S54 (rhomboid) family [Hyphomonas neptunium ATCC 15444]
Length = 204
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 29 PGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYN 88
P +L+LI++ + ++ + P+++ I + + ++ ++ RL+ S H + HL+ N
Sbjct: 8 PASLSLIILNVIASLIAFRSAPFNNQNI-LWVGPMKDRGEWHRLISSGFLHVNGPHLFLN 66
Query: 89 MVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
M L + G +E + G V F+++ +I SV
Sbjct: 67 MYGLYMFGPVIEHVLGGVNFLIIYLASLIGGSVW 100
>gi|449126889|ref|ZP_21763164.1| hypothetical protein HMPREF9733_00567 [Treponema denticola SP33]
gi|448945092|gb|EMB25967.1| hypothetical protein HMPREF9733_00567 [Treponema denticola SP33]
Length = 209
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 20/172 (11%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
++ + Y + HGD HL +NM++L G +ER G+ +F+ + +L+I T
Sbjct: 47 VVEAQTYWQFFTYQFVHGDFFHLAFNMLALFFFGVPVERKIGTKEFI--LYYLLIGTIDG 104
Query: 123 YVMLSYVIYLMNHDVTELYQCA-IGFSAVLFSMKTIRTRQSPD-VTHQLLNFSVPAV--- 177
+LS+++Y T Y + +G S +F + + P+ V + VPA
Sbjct: 105 --VLSFLVY----AATGFYIISLVGASGAIFGVLLLYAVIYPNSVVYLWAVIPVPAPLLI 158
Query: 178 --YAPWIELVIIHLMVPNASFKGHLSGILVGLCYTETSLG----RLVERSGR 223
YA IEL+ I + + H G+L G Y G ++ +GR
Sbjct: 159 LGYAV-IELISIFSVGDGVAHLTHFIGLLAGWVYIRIRFGIKPLKVWNSTGR 209
>gi|418423189|ref|ZP_12996358.1| rhomboid family protein [Mycobacterium abscessus subsp. bolletii
BD]
gi|363993164|gb|EHM14390.1| rhomboid family protein [Mycobacterium abscessus subsp. bolletii
BD]
Length = 252
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 25/146 (17%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
Q + R V + H MH+ NM+SL + G LER FG ++ + ++ +S +
Sbjct: 76 QGELWRTVTTGFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAAMW 135
Query: 126 LS--YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPD--VTHQLLNFSVPAVYAPW 181
LS V+ + + L A+ S +R R +P + LLN
Sbjct: 136 LSPNAVVAGASGAIYGLLGAALVLS--------LRERLNPQTIIIVLLLNIG-------- 179
Query: 182 IELVIIHLMVPNASFKGHLSGILVGL 207
+ + +P S GH+ G+L G+
Sbjct: 180 -----LSISLPGISLAGHMGGLLFGV 200
>gi|218131483|ref|ZP_03460287.1| hypothetical protein BACEGG_03101 [Bacteroides eggerthii DSM 20697]
gi|217986415|gb|EEC52752.1| peptidase, S54 family [Bacteroides eggerthii DSM 20697]
Length = 227
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWD-SLGICISAHTIL-NQRDYKRLVLSALEHGDDMH 84
IP T L++I L+++ V+AQ + L + H L + +L+ HG H
Sbjct: 4 IPTVTKNLLIINVLMFLGTVVAQSYGIDLNQYLGLHFFLAGDFNAAQLITYMFMHGGFTH 63
Query: 85 LYYNMVSLIVKGRELERMFGSVQFV 109
L++NM ++ + GR LE+++G +F+
Sbjct: 64 LFFNMFAVWMFGRILEQVWGPKRFL 88
>gi|365987714|ref|XP_003670688.1| hypothetical protein NDAI_0F01260 [Naumovozyma dairenensis CBS 421]
gi|343769459|emb|CCD25445.1| hypothetical protein NDAI_0F01260 [Naumovozyma dairenensis CBS 421]
Length = 277
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 6/149 (4%)
Query: 88 NMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGF 147
N+ ++ V E G++ V+++ L I T V Y ++Y N + F
Sbjct: 76 NVFAIFVPLTIFETNHGTIYTGVILNLLAIFTGVFYCFAGTILY-PNVSIAGASGWCFTF 134
Query: 148 SAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG- 206
F+++ R R + + ++P V P + L +I +VP +SF GH G++ G
Sbjct: 135 WG-YFALQESRIRPRYENFAHISGLNIPTVAVPIVMLFVIAFLVPGSSFPGHALGLMFGY 193
Query: 207 -LCYTETSLGRLVERSG--RSVSRVVNTL 232
+ + E + +V S + +VV+ L
Sbjct: 194 LMGWKENWVAMIVPPSWIIVKIEKVVDKL 222
>gi|420912660|ref|ZP_15375972.1| rhomboid family protein [Mycobacterium abscessus 6G-0125-R]
gi|420919114|ref|ZP_15382417.1| rhomboid family protein [Mycobacterium abscessus 6G-0125-S]
gi|420924284|ref|ZP_15387580.1| rhomboid family protein [Mycobacterium abscessus 6G-0728-S]
gi|420929944|ref|ZP_15393223.1| rhomboid family protein [Mycobacterium abscessus 6G-1108]
gi|420969638|ref|ZP_15432841.1| rhomboid family protein [Mycobacterium abscessus 3A-0810-R]
gi|420980281|ref|ZP_15443458.1| rhomboid family protein [Mycobacterium abscessus 6G-0212]
gi|420985667|ref|ZP_15448834.1| rhomboid family protein [Mycobacterium abscessus 6G-0728-R]
gi|421009768|ref|ZP_15472877.1| rhomboid family protein [Mycobacterium abscessus 3A-0119-R]
gi|421010496|ref|ZP_15473600.1| rhomboid family protein [Mycobacterium abscessus 3A-0122-R]
gi|421020930|ref|ZP_15483986.1| rhomboid family protein [Mycobacterium abscessus 3A-0122-S]
gi|421025708|ref|ZP_15488751.1| rhomboid family protein [Mycobacterium abscessus 3A-0731]
gi|421031230|ref|ZP_15494260.1| rhomboid family protein [Mycobacterium abscessus 3A-0930-R]
gi|392112005|gb|EIU37775.1| rhomboid family protein [Mycobacterium abscessus 6G-0125-S]
gi|392114654|gb|EIU40423.1| rhomboid family protein [Mycobacterium abscessus 6G-0125-R]
gi|392126932|gb|EIU52683.1| rhomboid family protein [Mycobacterium abscessus 6G-1108]
gi|392128937|gb|EIU54687.1| rhomboid family protein [Mycobacterium abscessus 6G-0728-S]
gi|392164559|gb|EIU90248.1| rhomboid family protein [Mycobacterium abscessus 6G-0212]
gi|392170663|gb|EIU96341.1| rhomboid family protein [Mycobacterium abscessus 6G-0728-R]
gi|392195374|gb|EIV20993.1| rhomboid family protein [Mycobacterium abscessus 3A-0119-R]
gi|392206653|gb|EIV32236.1| rhomboid family protein [Mycobacterium abscessus 3A-0122-S]
gi|392209231|gb|EIV34803.1| rhomboid family protein [Mycobacterium abscessus 3A-0731]
gi|392216607|gb|EIV42150.1| rhomboid family protein [Mycobacterium abscessus 3A-0122-R]
gi|392219112|gb|EIV44637.1| rhomboid family protein [Mycobacterium abscessus 3A-0930-R]
gi|392245294|gb|EIV70772.1| rhomboid family protein [Mycobacterium abscessus 3A-0810-R]
Length = 247
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 25/146 (17%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
Q + R V + H MH+ NM+SL + G LER FG ++ + ++ +S +
Sbjct: 71 QGELWRTVTTGFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAAMW 130
Query: 126 LS--YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPD--VTHQLLNFSVPAVYAPW 181
LS V+ + + L A+ S +R R +P + LLN
Sbjct: 131 LSPNAVVAGASGAIYGLLGAALVLS--------LRERLNPQTIIIVLLLNIG-------- 174
Query: 182 IELVIIHLMVPNASFKGHLSGILVGL 207
+ + +P S GH+ G+L G+
Sbjct: 175 -----LSISLPGISLAGHMGGLLFGV 195
>gi|150003566|ref|YP_001298310.1| transmembrane rhomboid family protein [Bacteroides vulgatus ATCC
8482]
gi|345517236|ref|ZP_08796714.1| hypothetical protein BSFG_00455 [Bacteroides sp. 4_3_47FAA]
gi|423313295|ref|ZP_17291231.1| hypothetical protein HMPREF1058_01843 [Bacteroides vulgatus
CL09T03C04]
gi|149931990|gb|ABR38688.1| putative transmembrane rhomboid family protein [Bacteroides
vulgatus ATCC 8482]
gi|254833999|gb|EET14308.1| hypothetical protein BSFG_00455 [Bacteroides sp. 4_3_47FAA]
gi|392685645|gb|EIY78960.1| hypothetical protein HMPREF1058_01843 [Bacteroides vulgatus
CL09T03C04]
Length = 225
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPW-----DSLGICISAHTILNQRDYKRLVLSALEHGD 81
IP T L++I L + V+A + D LG+ + N +L+ HG
Sbjct: 4 IPTVTKNLLIINVLCFFGGVVAMKYGIDLNDLLGLHFFMASDFNP---AQLITYMFMHGG 60
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
H+++NM +L + GR LE+++G +F+ I + ++ Y+ Y VTEL
Sbjct: 61 FQHIFFNMFALWMFGRTLEQVWGPKRFLSYYMVCGIGAGLVQELVQYIQY-----VTELS 115
Query: 142 Q 142
Q
Sbjct: 116 Q 116
>gi|357121685|ref|XP_003562548.1| PREDICTED: transmembrane protein 115-like [Brachypodium distachyon]
Length = 315
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 88 NMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGF 147
++V L++ G+ LE ++G+ + + V + STSVC + + Y + T LY GF
Sbjct: 81 SIVGLLLFGKLLEPLWGTKELLKFVFIVNFSTSVCVFITAIAFYYVTQQETYLYTPLSGF 140
Query: 148 SAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWI 182
VL + + PD Q LN V + WI
Sbjct: 141 YGVLSGLLVGIKQLLPD---QELNLFVLKIKGKWI 172
>gi|124266322|ref|YP_001020326.1| integral membrane protein [Methylibium petroleiphilum PM1]
gi|124259097|gb|ABM94091.1| integral membrane protein [Methylibium petroleiphilum PM1]
Length = 196
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 76 ALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFV 109
A HG HL++NM+ L + G ELER++G+ +FV
Sbjct: 51 AFLHGGIGHLFFNMLGLWMFGAELERLWGTKRFV 84
>gi|317476443|ref|ZP_07935692.1| rhomboid family protein [Bacteroides eggerthii 1_2_48FAA]
gi|316907469|gb|EFV29174.1| rhomboid family protein [Bacteroides eggerthii 1_2_48FAA]
Length = 227
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWD-SLGICISAHTIL-NQRDYKRLVLSALEHGDDMH 84
IP T L++I L+++ V+AQ + L + H L + +L+ HG H
Sbjct: 4 IPTVTKNLLIINVLIFLGTVVAQSYGIDLNQYLGLHFFLAGDFNAAQLITYMFMHGGFTH 63
Query: 85 LYYNMVSLIVKGRELERMFGSVQFV 109
L++NM ++ + GR LE+++G +F+
Sbjct: 64 LFFNMFAVWMFGRILEQVWGPKRFL 88
>gi|145549604|ref|XP_001460481.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428311|emb|CAK93084.1| unnamed protein product [Paramecium tetraurelia]
Length = 265
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWD-SLGICISAHTILNQRDYKRLVLSALEHGDDMHL 85
I GT ++ I + Y+++ + + +L + I TIL Q + R+++ HG+ +L
Sbjct: 14 ISFGTKFVLFISIICYLIDYYYEEYYYTLFVNIPKKTIL-QYQFWRILIPQFFHGNIQNL 72
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAI 145
+++ + + E+ FGSVQF V + + + +V + ++ ++ L +
Sbjct: 73 AISLLGFLYFAIQTEKKFGSVQFFVDIFIKNLIIQIIFVAFCFGFSYLDEEM--LIANSF 130
Query: 146 GFSAVLFSMKTIRTRQSPDVTHQLLNFSV--PAVYAPWIELVIIHLMV 191
GF + F + R D T + L FS+ Y P + +I++ +V
Sbjct: 131 GFWNLSFIYQMRRALNDDDETQKFLCFSLNFQQKYLPALFFLIMNFIV 178
>gi|365872871|ref|ZP_09412407.1| rhomboid family protein [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|363992937|gb|EHM14164.1| rhomboid family protein [Mycobacterium massiliense CCUG 48898 = JCM
15300]
Length = 252
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 25/146 (17%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
Q + R V + H MH+ NM+SL + G LER FG ++ + ++ +S +
Sbjct: 76 QGELWRTVTTGFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAAMW 135
Query: 126 LS--YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPD--VTHQLLNFSVPAVYAPW 181
LS V+ + + L A+ S +R R +P + LLN
Sbjct: 136 LSPNAVVAGASGAIYGLLGAALVLS--------LRERLNPQTIIIVLLLNIG-------- 179
Query: 182 IELVIIHLMVPNASFKGHLSGILVGL 207
+ + +P S GH+ G+L G+
Sbjct: 180 -----LSISLPGISLAGHMGGLLFGV 200
>gi|381399873|ref|ZP_09924890.1| Rhomboid family protein [Microbacterium laevaniformans OR221]
gi|380772836|gb|EIC06523.1| Rhomboid family protein [Microbacterium laevaniformans OR221]
Length = 281
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 24/183 (13%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSLGI----CISAHTILNQRDYKRLVLSALEHGDDM 83
P T TL+++ ++ Y++ ++ +G+ ++ H L RL+ L H
Sbjct: 77 PVVTYTLVIVTSVFYLIGLI----PGIGLYVQNLLAFHAQLAYVQPWRLLTVTLVHASIF 132
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC 143
H+ +NM++L GR LE + G +F+ L + SV +L+ N V
Sbjct: 133 HIAFNMLALWALGRSLEPLLGRWRFLALYLLSALGGSVLTALLA-----PNTWVVGASGA 187
Query: 144 AIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGI 203
G +F + H N + AV I LVI L N +++ H+ G
Sbjct: 188 VWGLLGAMFVIG----------RHLGANVTAIAVLLG-INLVITFLPGSNIAWQAHIGGG 236
Query: 204 LVG 206
LVG
Sbjct: 237 LVG 239
>gi|414584256|ref|ZP_11441396.1| rhomboid family protein [Mycobacterium abscessus 5S-1215]
gi|420881430|ref|ZP_15344797.1| rhomboid family protein [Mycobacterium abscessus 5S-0304]
gi|420884483|ref|ZP_15347843.1| rhomboid family protein [Mycobacterium abscessus 5S-0421]
gi|420887277|ref|ZP_15350635.1| rhomboid family protein [Mycobacterium abscessus 5S-0422]
gi|420896232|ref|ZP_15359571.1| rhomboid family protein [Mycobacterium abscessus 5S-0708]
gi|420901413|ref|ZP_15364744.1| rhomboid family protein [Mycobacterium abscessus 5S-0817]
gi|420907312|ref|ZP_15370630.1| rhomboid family protein [Mycobacterium abscessus 5S-1212]
gi|420974770|ref|ZP_15437960.1| rhomboid family protein [Mycobacterium abscessus 5S-0921]
gi|421052000|ref|ZP_15514994.1| rhomboid family protein [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|392080246|gb|EIU06072.1| rhomboid family protein [Mycobacterium abscessus 5S-0421]
gi|392086339|gb|EIU12164.1| rhomboid family protein [Mycobacterium abscessus 5S-0304]
gi|392093991|gb|EIU19787.1| rhomboid family protein [Mycobacterium abscessus 5S-0422]
gi|392095544|gb|EIU21339.1| rhomboid family protein [Mycobacterium abscessus 5S-0708]
gi|392098774|gb|EIU24568.1| rhomboid family protein [Mycobacterium abscessus 5S-0817]
gi|392105216|gb|EIU31002.1| rhomboid family protein [Mycobacterium abscessus 5S-1212]
gi|392119408|gb|EIU45176.1| rhomboid family protein [Mycobacterium abscessus 5S-1215]
gi|392159888|gb|EIU85581.1| rhomboid family protein [Mycobacterium abscessus 5S-0921]
gi|392240603|gb|EIV66096.1| rhomboid family protein [Mycobacterium massiliense CCUG 48898]
Length = 247
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 25/146 (17%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
Q + R V + H MH+ NM+SL + G LER FG ++ + ++ +S +
Sbjct: 71 QGELWRTVTTGFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAAMW 130
Query: 126 LS--YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPD--VTHQLLNFSVPAVYAPW 181
LS V+ + + L A+ S +R R +P + LLN
Sbjct: 131 LSPNAVVAGASGAIYGLLGAALVLS--------LRERLNPQTIIIVLLLNIG-------- 174
Query: 182 IELVIIHLMVPNASFKGHLSGILVGL 207
+ + +P S GH+ G+L G+
Sbjct: 175 -----LSISLPGISLAGHMGGLLFGV 195
>gi|420866475|ref|ZP_15329864.1| rhomboid family protein [Mycobacterium abscessus 4S-0303]
gi|420871266|ref|ZP_15334648.1| rhomboid family protein [Mycobacterium abscessus 4S-0726-RA]
gi|420875716|ref|ZP_15339092.1| rhomboid family protein [Mycobacterium abscessus 4S-0726-RB]
gi|420988850|ref|ZP_15452006.1| rhomboid family protein [Mycobacterium abscessus 4S-0206]
gi|421040347|ref|ZP_15503355.1| rhomboid family protein [Mycobacterium abscessus 4S-0116-R]
gi|421046065|ref|ZP_15509065.1| rhomboid family protein [Mycobacterium abscessus 4S-0116-S]
gi|392065191|gb|EIT91040.1| rhomboid family protein [Mycobacterium abscessus 4S-0303]
gi|392067191|gb|EIT93039.1| rhomboid family protein [Mycobacterium abscessus 4S-0726-RB]
gi|392070736|gb|EIT96583.1| rhomboid family protein [Mycobacterium abscessus 4S-0726-RA]
gi|392183129|gb|EIV08780.1| rhomboid family protein [Mycobacterium abscessus 4S-0206]
gi|392221275|gb|EIV46798.1| rhomboid family protein [Mycobacterium abscessus 4S-0116-R]
gi|392235518|gb|EIV61016.1| rhomboid family protein [Mycobacterium abscessus 4S-0116-S]
Length = 247
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 25/146 (17%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
Q + R V + H MH+ NM+SL + G LER FG ++ + ++ +S +
Sbjct: 71 QGELWRTVTTGFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAAMW 130
Query: 126 LS--YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPD--VTHQLLNFSVPAVYAPW 181
LS V+ + + L A+ S +R R +P + LLN
Sbjct: 131 LSPNAVVAGASGAIYGLLGAALVLS--------LRERLNPQTIIIVLLLNIG-------- 174
Query: 182 IELVIIHLMVPNASFKGHLSGILVGL 207
+ + +P S GH+ G+L G+
Sbjct: 175 -----LSISLPGISLAGHMGGLLFGV 195
>gi|21232008|ref|NP_637925.1| hypothetical protein XCC2577 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66767865|ref|YP_242627.1| hypothetical protein XC_1541 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188990980|ref|YP_001902990.1| Rhomboid family membrane protein [Xanthomonas campestris pv.
campestris str. B100]
gi|384428551|ref|YP_005637911.1| integral membrane protein [Xanthomonas campestris pv. raphani 756C]
gi|21113745|gb|AAM41849.1| integral membrane protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66573197|gb|AAY48607.1| integral membrane protein [Xanthomonas campestris pv. campestris
str. 8004]
gi|167732740|emb|CAP50934.1| Rhomboid family membrane protein [Xanthomonas campestris pv.
campestris]
gi|341937654|gb|AEL07793.1| integral membrane protein [Xanthomonas campestris pv. raphani 756C]
Length = 228
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
+L+ A HG HL++NM++L + G LE+ +G +F+ + VC +++++
Sbjct: 65 QLLTYAFLHGGFNHLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGVCQLLMAW 122
>gi|164448564|ref|NP_001039943.2| rhomboid domain-containing protein 2 [Bos taurus]
gi|296472983|tpg|DAA15098.1| TPA: rhomboid domain containing 2 [Bos taurus]
Length = 364
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 15/172 (8%)
Query: 46 VLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
+L QP G+ + + + N + Y RLV + + + L + + ER G+
Sbjct: 38 LLQQPLAPSGLSLRSEALRNWQVY-RLVTYIFVYENPVSLLCGAIVIWRFAGNFERTVGT 96
Query: 106 VQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-----AIGFSAVLFSMKTIRTR 160
V+ F ++ T +C + I+L V+ L + A GF+ V F+M +
Sbjct: 97 VRHCF---FTVVFTIICAI-----IFLSFEAVSSLSKLGEVEDARGFTPVAFAMLGVNCV 148
Query: 161 QSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYTET 212
+S + VP++ PW+ L+ ++P SF ++ G+ +GL Y T
Sbjct: 149 RSRMRRALVFGVVVPSLLVPWL-LLCASWLIPQTSFLSNVCGLGIGLAYGLT 199
>gi|431793836|ref|YP_007220741.1| hypothetical protein Desdi_1896 [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784062|gb|AGA69345.1| putative membrane protein [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 321
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICI----SAHTILNQRDYKRLVLSALEHGDDMHLY 86
T +LI I ++ M LA + G+ I ++++ Q +Y RL S H +HL
Sbjct: 145 TYSLIFINLFIFAMMTLAGGSTNTGVLIMFGAKVNSLILQGEYWRLFTSMFLHIGVIHLA 204
Query: 87 YNMVSLIVKGRELERMFGSVQFVVL 111
+N+ +L G LE +FG ++++++
Sbjct: 205 FNLYALWALGPILEELFGRIRYLLI 229
>gi|443626016|ref|ZP_21110448.1| putative membrane protein [Streptomyces viridochromogenes Tue57]
gi|443340440|gb|ELS54650.1| putative membrane protein [Streptomyces viridochromogenes Tue57]
Length = 313
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 24/146 (16%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
+ + RL+ S HG +H+ +NM+SL G LE G V+++ L +L+ + +
Sbjct: 147 EGQWYRLLTSMFLHGSYIHILFNMLSLWWIGGPLEAALGRVRYIAL--YLV--SGLAGSA 202
Query: 126 LSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELV 185
L+Y+I N Q ++G S +F + + V + L + + P I L+
Sbjct: 203 LTYLIAAAN-------QPSLGASGAIFGLFG-----ATAVLMRRLQYDM----RPVIALL 246
Query: 186 IIHLM----VPNASFKGHLSGILVGL 207
+I+L+ + +++ H+ G++ GL
Sbjct: 247 VINLIFTFGLAQIAWQAHIGGLVAGL 272
>gi|294777625|ref|ZP_06743076.1| peptidase, S54 (rhomboid) family protein [Bacteroides vulgatus
PC510]
gi|294448693|gb|EFG17242.1| peptidase, S54 (rhomboid) family protein [Bacteroides vulgatus
PC510]
Length = 225
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPW-----DSLGICISAHTILNQRDYKRLVLSALEHGD 81
IP T L++I L + V+A + D LG+ + N +L+ HG
Sbjct: 4 IPTVTKNLLIINVLCFFGGVVAMKYGINLNDLLGLHFFMASDFNP---AQLITYMFMHGG 60
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
H+++NM +L + GR LE+++G +F+ I + ++ Y+ Y VTEL
Sbjct: 61 FQHIFFNMFALWMFGRTLEQVWGPKRFLSYYMVCGIGAGLVQELVQYIQY-----VTELS 115
Query: 142 Q 142
Q
Sbjct: 116 Q 116
>gi|416242727|ref|ZP_11633696.1| rhomboid family protein [Moraxella catarrhalis BC7]
gi|326570623|gb|EGE20659.1| rhomboid family protein [Moraxella catarrhalis BC7]
Length = 201
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERM----FGSVQFV 109
+N+ Y RL+ H + MHL +NM +L GR +ER FG++ FV
Sbjct: 35 VNKGQYDRLLTHGFIHANGMHLLFNMFTLYFFGRVIERFYIDKFGNLGFV 84
>gi|383786745|ref|YP_005471314.1| hypothetical protein [Fervidobacterium pennivorans DSM 9078]
gi|383109592|gb|AFG35195.1| putative membrane protein [Fervidobacterium pennivorans DSM 9078]
Length = 233
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 32 LTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVS 91
L ++QT +++P+ L +++Q ++ R+V + HG +HL +NM +
Sbjct: 27 LAFYVVQTFF-----VSEPYAYLLFGAQYGPLVDQGEWWRIVTAMFMHGGFLHLAFNMYA 81
Query: 92 LIVKGRELERMFGSVQFV 109
L + G E ++G+ +F+
Sbjct: 82 LYILGSYAEGIYGTYRFL 99
>gi|160901697|ref|YP_001567278.1| rhomboid family protein [Petrotoga mobilis SJ95]
gi|160359341|gb|ABX30955.1| Rhomboid family protein [Petrotoga mobilis SJ95]
Length = 226
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 34 LILIQTLLYIMNVLAQPWDSLG-----ICISAH--TILNQRDYKRLVLSALEHGDDMHLY 86
LI++ L++IM L + I A ++ ++ RL+ S HG H++
Sbjct: 9 LIMLNVLIFIMMFLFGGLSAFSNPRIYILFGAQLGNLITAGEWFRLITSMFVHGGLFHIF 68
Query: 87 YNMVSLIVKGRELERMFGSVQFV 109
+NM++L G +ER +G +F+
Sbjct: 69 FNMIALFYVGNIVERAYGKERFI 91
>gi|255729592|ref|XP_002549721.1| hypothetical protein CTRG_04018 [Candida tropicalis MYA-3404]
gi|240132790|gb|EER32347.1| hypothetical protein CTRG_04018 [Candida tropicalis MYA-3404]
Length = 286
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 75/190 (39%), Gaps = 23/190 (12%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
+ L ++ H + H N+ +L+ E G++ V ++ L + + Y +
Sbjct: 56 NLNSLSFYSMVHTNFFHWICNIFTLLTPLAIFEMRNGTIHTGVTLNLLTVVAGLQYCLAG 115
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQL-------LNFSVPAVYAP 180
+ Y N V +G S + FS + Q + + +Y P
Sbjct: 116 LLFY-PNTGV-------VGLSGIAFSFMSYMAYQESKFKPIFYTWHFNNMELKIYTIYLP 167
Query: 181 WIELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERS------GRSVSRVVNTLTN 234
+ + ++ P++SF GH++GIL G L +L S + VS ++N L
Sbjct: 168 FFIALFFMVLFPSSSFPGHVTGILTGYLLALGYLNKLYPPSHILVSIEKKVSSLINLLGK 227
Query: 235 V--FKLDDDC 242
+ F +D+C
Sbjct: 228 IVTFYKEDEC 237
>gi|219111855|ref|XP_002177679.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410564|gb|EEC50493.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 354
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
R++ S L + L + +S +G+ +E GS F VL + + +V +++ + ++
Sbjct: 74 RILTSPLVNTRFFSLLFAFLSFTSQGKRMENSMGSTAFGVLCLTMGVLANVLFLVTNVLL 133
Query: 131 YLMNH-DVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNF-SVPAVYAP 180
Y ++ + L+ A G +LF + + Q+P T + L F +P +Y P
Sbjct: 134 YYVSGGEQAFLFTAAAGIWLILFGIIAMECVQAPRGTQRPLFFCKIPTIYYP 185
>gi|313886257|ref|ZP_07819986.1| peptidase, S54 family [Porphyromonas asaccharolytica PR426713P-I]
gi|332299847|ref|YP_004441768.1| rhomboid family protein [Porphyromonas asaccharolytica DSM 20707]
gi|312924328|gb|EFR35108.1| peptidase, S54 family [Porphyromonas asaccharolytica PR426713P-I]
gi|332176910|gb|AEE12600.1| Rhomboid family protein [Porphyromonas asaccharolytica DSM 20707]
Length = 239
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 27 IPPGTLTLILIQTLLYI-MNVLAQPWDSLGICISAHTILNQRDY-KRLVLSALEHGDDMH 84
IPP TL L++I + YI V+ + L + H + Q + + V HG H
Sbjct: 12 IPPVTLNLLIINLIFYIAQQVVPRTGIDLTGLLGLHYVTAQGFHIWQPVTYMFLHGSFTH 71
Query: 85 LYYNMVSLIVKGRELERMFGSVQFVVL 111
L++NM +L + G +ER +G+ +F++
Sbjct: 72 LFFNMFALFMFGVTIERTWGAQRFLLF 98
>gi|297564157|ref|YP_003683130.1| rhomboid family protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848606|gb|ADH70624.1| Rhomboid family protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 306
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 23/168 (13%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
++ RL+ +A HG HL +N ++ + G +LER G V+F+ L + SV ++
Sbjct: 137 EWYRLLTAAFLHGSIFHLLFNGYAMYLLGTQLERWLGHVRFLTLWVLGAFAGSVLSLL-- 194
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVII 187
E Q ++G S +F++ V + L + + + +++
Sbjct: 195 ----------AEPNQFSVGASGAIFALFGAVL-----VIGRRLRLDLRMIGVLLVVNLVL 239
Query: 188 HLMVPNASFKGHLSGILVGLCYTETSLGRLVER-SGRSVSRVVNTLTN 234
+VPN S+ H+ G++ GL +LG + GRS T+T+
Sbjct: 240 TFVVPNISWTAHIGGLVAGL-----ALGAVFAYLPGRSAGNRARTVTH 282
>gi|169627133|ref|YP_001700782.1| rhomboid family protein [Mycobacterium abscessus ATCC 19977]
gi|169239100|emb|CAM60128.1| Rhomboid family protein [Mycobacterium abscessus]
Length = 287
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 25/146 (17%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
Q + R V + H MH+ NM+SL + G LER FG ++ + ++ +S +
Sbjct: 111 QGELWRTVTTGFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAAMW 170
Query: 126 LS--YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPD--VTHQLLNFSVPAVYAPW 181
LS V+ + + L +G + VL ++R R +P + LLN
Sbjct: 171 LSPNAVVAGASGAIYGL----LGAALVL----SLRERLNPQTIIIVLLLNIG-------- 214
Query: 182 IELVIIHLMVPNASFKGHLSGILVGL 207
+ + +P S GH+ G+L G+
Sbjct: 215 -----LSISLPGISLAGHMGGLLFGV 235
>gi|397678270|ref|YP_006519805.1| Rhomboid protease gluP [Mycobacterium massiliense str. GO 06]
gi|395456535|gb|AFN62198.1| Rhomboid protease gluP [Mycobacterium massiliense str. GO 06]
Length = 287
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 25/146 (17%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
Q + R V + H MH+ NM+SL + G LER FG ++ + ++ +S +
Sbjct: 111 QGELWRTVTTGFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAAMW 170
Query: 126 LS--YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPD--VTHQLLNFSVPAVYAPW 181
LS V+ + + L +G + VL ++R R +P + LLN
Sbjct: 171 LSPNAVVAGASGAIYGL----LGAALVL----SLRERLNPQTIIIVLLLNIG-------- 214
Query: 182 IELVIIHLMVPNASFKGHLSGILVGL 207
+ + +P S GH+ G+L G+
Sbjct: 215 -----LSISLPGISLAGHMGGLLFGV 235
>gi|408672893|ref|YP_006872641.1| Rhomboid family protein [Emticicia oligotrophica DSM 17448]
gi|387854517|gb|AFK02614.1| Rhomboid family protein [Emticicia oligotrophica DSM 17448]
Length = 234
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 9/60 (15%)
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMF---------GSVQFVVL 111
+ + +++Y R + S H D MHL++NM +L G +E++F GSV +V+
Sbjct: 59 YAVERRKEYHRFITSGFVHADYMHLFFNMYTLYSFGEFMEQVFIQRFDDPKIGSVAYVLF 118
>gi|333917705|ref|YP_004491286.1| rhomboid family protein [Amycolicicoccus subflavus DQS3-9A1]
gi|333479926|gb|AEF38486.1| Rhomboid family protein [Amycolicicoccus subflavus DQS3-9A1]
Length = 255
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL--VSFLIISTSVCYVM 125
+Y+RL+ S H +HL NM +L + GRE+E + G +++ + +S L S +V ++
Sbjct: 77 EYERLIGSGFLHYGPIHLLVNMFALFIVGREIELVLGRWRYLAVYAISLLSGSAAVMWMQ 136
Query: 126 LSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPD 164
+ + V L+ G AV+ + R RQ+P
Sbjct: 137 IDAATAGASGAVFGLF----GALAVILT----RLRQNPT 167
>gi|326383928|ref|ZP_08205612.1| Rhomboid family protein [Gordonia neofelifaecis NRRL B-59395]
gi|326197387|gb|EGD54577.1| Rhomboid family protein [Gordonia neofelifaecis NRRL B-59395]
Length = 248
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQF--VVLVSFLIISTSV 121
Q +Y RL+ S H +H+ NM+SL + G +LER+ G V++ V L+ L S +V
Sbjct: 72 QDEYWRLLTSGFLHWSVVHIAMNMISLYLIGADLERVLGPVRYLAVYLIGLLGGSAAV 129
>gi|158337464|ref|YP_001518639.1| rhomboid family protein [Acaryochloris marina MBIC11017]
gi|158307705|gb|ABW29322.1| rhomboid family protein [Acaryochloris marina MBIC11017]
Length = 537
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 53 SLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLV 112
+LG I + + D+ RL+ +A H HL NM L + G +E+M G+ +F+ V
Sbjct: 365 TLGALIPSEVVAG--DWWRLLAAAFLHFGIEHLSLNMFGLGLLGPFVEKMLGTWRFI--V 420
Query: 113 SFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFS---------MKTIRTRQSP 163
S+L+ T++ ++ ++ + VT A+G S + M+ IR + S
Sbjct: 421 SYLM--TAIGSMLTLTLLTITGIFVTP---AAVGASGAIMGLIGTEAAIQMRIIRQQSSK 475
Query: 164 DVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGL 207
+L + V +I + P SF GH SG+++G
Sbjct: 476 VAATRLRLIGLFVVIQ-----MIFDAVTPQVSFIGHASGLVIGF 514
>gi|46127153|ref|XP_388130.1| hypothetical protein FG07954.1 [Gibberella zeae PH-1]
gi|83288432|sp|Q4I4A4.1|RBD2_GIBZE RecName: Full=Rhomboid protein 2
Length = 267
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 12/140 (8%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIIS-TSVCYVMLSYV 129
RL L H + +H N+++L E G++ + L + S +V YV++
Sbjct: 63 RLSTFPLIHLNVIHAILNLLALTPLMERFETEHGTLTSLALFFGPLTSIPAVAYVLIERC 122
Query: 130 IYLMNHDVTELYQCAIGFSAVLF---SMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVI 186
I+ NH V +G S +F +M++I+T +S + + + ++P P I ++
Sbjct: 123 IFRANHGV-------LGASMWVFTLLAMESIQTYKS-NPHFVIGSVNIPTWTTPLIMSLV 174
Query: 187 IHLMVPNASFKGHLSGILVG 206
+ ++P S GHL GI +G
Sbjct: 175 VAALIPGTSLLGHLCGIAIG 194
>gi|289668300|ref|ZP_06489375.1| integral membrane protein [Xanthomonas campestris pv. musacearum
NCPPB 4381]
Length = 232
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
+L+ A HG HL++NM++L + G LE+ +G +F+ + VC +++++
Sbjct: 64 QLLTYAFLHGGFNHLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGVCQLLMAW 121
>gi|389759371|ref|ZP_10191765.1| hypothetical protein UU5_18447 [Rhodanobacter sp. 115]
gi|388430478|gb|EIL87642.1| hypothetical protein UU5_18447 [Rhodanobacter sp. 115]
Length = 221
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 48/124 (38%), Gaps = 7/124 (5%)
Query: 52 DSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL 111
D G H I ++V A HG H+ +NM +L + G +E+ FG+ FV
Sbjct: 46 DVTGATPDGHVITAGFRIWQVVTYAFMHGGFTHILFNMFALYMFGGAIEQTFGARHFV-- 103
Query: 112 VSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLN 171
I VC ++ + L+ T + IG S +F + P LL
Sbjct: 104 -----IYYFVCAIVAALAQLLVVKYFTHGFYPTIGASGAIFGLLLAFGMLYPQEKVMLLF 158
Query: 172 FSVP 175
VP
Sbjct: 159 LPVP 162
>gi|421615034|ref|ZP_16056072.1| glpG protein [Rhodopirellula baltica SH28]
gi|408494207|gb|EKJ98827.1| glpG protein [Rhodopirellula baltica SH28]
Length = 329
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCY 123
+ + + RLV A HG MHL +NM++L G +ER+ GS L S L++S
Sbjct: 184 IKKGEIWRLVTPAFLHGSTMHLVFNMMALFTLGSVVERLHGS---WFLGSLLLVSH---- 236
Query: 124 VMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKT---IRTRQSPDVTHQLLNFSV 174
++ ++ ++ D E A+G S +F + IR R P + F+V
Sbjct: 237 -IIGMIVQVVLPDWLE-SPMAVGASGAVFGVFGFIWIRPRFQPSYPVGIPPFNV 288
>gi|255530015|ref|YP_003090387.1| rhomboid family protein [Pedobacter heparinus DSM 2366]
gi|255342999|gb|ACU02325.1| Rhomboid family protein [Pedobacter heparinus DSM 2366]
Length = 205
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 66 QRDYK--RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQF 108
R YK L+ S L H D MHL +NM++ +LE M GS QF
Sbjct: 42 SRRYKVYTLITSGLIHADWMHLIFNMMTFFFFAFQLEAMIGSWQF 86
>gi|84624764|ref|YP_452136.1| integral membrane protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84368704|dbj|BAE69862.1| integral membrane protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 254
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
+L+ A HG HL++NM++L + G LE+ +G +F+ + VC +++++
Sbjct: 86 QLLTYAFLHGGFNHLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGVCQLLIAW 143
>gi|345801162|ref|XP_546933.2| PREDICTED: rhomboid domain-containing protein 2 isoform 1 [Canis
lupus familiaris]
Length = 363
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 15/172 (8%)
Query: 46 VLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
+L P G+ + + + N + Y RLV + + + L + + ER G+
Sbjct: 38 LLQPPLAPSGLSLRSEALRNWQVY-RLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGT 96
Query: 106 VQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-----AIGFSAVLFSMKTIRTR 160
V+ +V + + S +I+L V+ L + A GF+ V F+M + +
Sbjct: 97 VRHCFF--------TVIFAIFSAIIFLSFEAVSSLSKLGEVEDARGFTPVAFAMLGVNSV 148
Query: 161 QSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYTET 212
+S + VP++ PW+ L+ ++P SF ++ G+ +GL Y T
Sbjct: 149 RSRMRRALVFGMVVPSMLVPWL-LLCASWLIPQTSFLSNVCGLGIGLAYGLT 199
>gi|331694001|ref|YP_004330240.1| peptidase S54, rhomboid domain-containing protein [Pseudonocardia
dioxanivorans CB1190]
gi|326948690|gb|AEA22387.1| Peptidase S54, rhomboid domain protein [Pseudonocardia
dioxanivorans CB1190]
Length = 284
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 20/149 (13%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
Q ++ R+V + H +HL +NM++L V GR++E + G + + + ++ S ++
Sbjct: 122 QGEWWRVVTAGFLHYGPLHLLFNMLALWVIGRDMEMLLGRTRLLAVYLVALLGGSAAALL 181
Query: 126 LSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELV 185
Y N +V G S +F + + L VP + +
Sbjct: 182 F----YGANSEVA-------GASGAVFGLMG-------GLAVALRRMRVPMTQVVVVIAI 223
Query: 186 IIHLMV--PNASFKGHLSGILVGLCYTET 212
I L V P S GHL G++VG T
Sbjct: 224 NIVLSVTLPGVSLIGHLGGLIVGAVATAA 252
>gi|58582905|ref|YP_201921.1| hypothetical protein XOO3282 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|58427499|gb|AAW76536.1| integral membrane protein [Xanthomonas oryzae pv. oryzae KACC
10331]
Length = 260
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
+L+ A HG HL++NM++L + G LE+ +G +F+ + VC +++++
Sbjct: 92 QLLTYAFLHGGFNHLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGVCQLLIAW 149
>gi|256810190|ref|YP_003127559.1| rhomboid family protein [Methanocaldococcus fervens AG86]
gi|256793390|gb|ACV24059.1| Rhomboid family protein [Methanocaldococcus fervens AG86]
Length = 190
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 19/146 (13%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
++V+S HG HL NM L + G LER+ GS ++ LI TS L+Y++
Sbjct: 40 QIVMSIFMHGSITHLLVNMFVLFIFGTYLERIVGSKNYL-----LIFLTSGIVGNLAYIL 94
Query: 131 YLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHL- 189
Y +T Y ++G S +F + +P + +++ F +P + + ++I L
Sbjct: 95 Y---AYLTGDYAPSVGASGAIFGVMGALAILAPHL--RVVVFPLPVPISIKLAVIIFALI 149
Query: 190 ---MVPNASFKG-----HLSGILVGL 207
++P S G HL+G++ GL
Sbjct: 150 DLILLPYTSKTGIAHITHLAGLITGL 175
>gi|441521785|ref|ZP_21003443.1| rhomboid family protein [Gordonia sihwensis NBRC 108236]
gi|441458723|dbj|GAC61404.1| rhomboid family protein [Gordonia sihwensis NBRC 108236]
Length = 248
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 16/141 (11%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
+ +Y RL+ S H +H+ NM+SL + G +LER+ G +++ + + S V
Sbjct: 72 ENEYWRLLTSGFLHWSILHVAMNMISLYLIGADLERVLGPARYLAVYLIGLFGGSAAVVA 131
Query: 126 LSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELV 185
L + +Y A+L + ++ + +T +LN V
Sbjct: 132 LGPELAATAGASGAIYGL---LGALLIVVIRLKLPATTLITVIVLN-------------V 175
Query: 186 IIHLMVPNASFKGHLSGILVG 206
++ L +P S H G + G
Sbjct: 176 VLSLSIPGISIWAHFGGFVFG 196
>gi|443287776|ref|ZP_21026871.1| Rhomboid family protein [Micromonospora lupini str. Lupac 08]
gi|385882192|emb|CCH21804.1| Rhomboid family protein [Micromonospora lupini str. Lupac 08]
Length = 303
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 62/160 (38%), Gaps = 20/160 (12%)
Query: 51 WDS-LGICISAHTILN---QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSV 106
W S LG+ + L + + RLV + H +HL NM +L V GR LE G +
Sbjct: 117 WGSVLGLAVFPDGTLGGIAEGQWYRLVTAMFLHYGVIHLLLNMWALWVLGRSLEANLGPL 176
Query: 107 QFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVT 166
+F L + +V +Y+ N G A L ++ R V
Sbjct: 177 RFGALYLIAGLGGNVA----AYLFSAQNSATAGASTAVFGLFAALIIIERKLGRDISQVI 232
Query: 167 HQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
L+ I LV L VP S GHL G++VG
Sbjct: 233 PILV-----------INLVFT-LTVPGISIPGHLGGLVVG 260
>gi|289663205|ref|ZP_06484786.1| integral membrane protein [Xanthomonas campestris pv. vasculorum
NCPPB 702]
Length = 232
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
+L+ A HG HL++NM++L + G LE+ +G +F+ + VC +++++
Sbjct: 64 QLLTYAFLHGGFNHLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGVCQLLMAW 121
>gi|319900801|ref|YP_004160529.1| Rhomboid family protein [Bacteroides helcogenes P 36-108]
gi|319415832|gb|ADV42943.1| Rhomboid family protein [Bacteroides helcogenes P 36-108]
Length = 227
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWD-SLGICISAHTIL-NQRDYKRLVLSALEHGDDMH 84
IP T L++I L+++ ++AQ + L + H L + + + + HG H
Sbjct: 4 IPTVTKNLLIINVLMFLGTIVAQSYGFDLAEYLGLHFFLADNFNVAQFITYMFMHGGFTH 63
Query: 85 LYYNMVSLIVKGRELERMFGSVQFV 109
L++NM ++ + GR LE+++G +F+
Sbjct: 64 LFFNMFAVWMFGRILEQVWGPKRFL 88
>gi|72163467|ref|YP_291124.1| rhomboid family protein [Thermobifida fusca YX]
gi|71917199|gb|AAZ57101.1| Rhomboid family protein [Thermobifida fusca YX]
Length = 298
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 62 TILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSV 121
+L + RL+ HG MHL +N +L V G +LER G +++ L + SV
Sbjct: 120 AVLAWHQWYRLLTGVFLHGGLMHLAFNGFALYVLGPQLERWLGHLRYAALWGVSALGGSV 179
>gi|415725936|ref|ZP_11470437.1| rhomboid family membrane protein [Gardnerella vaginalis 00703Dmash]
gi|388063809|gb|EIK86377.1| rhomboid family membrane protein [Gardnerella vaginalis 00703Dmash]
Length = 236
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 66/134 (49%), Gaps = 15/134 (11%)
Query: 75 SALEHGDDM-HLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLM 133
S H ++ H+++NM+ L G ELER FG +F L +LI C + + ++
Sbjct: 70 SMFVHAPNITHIFFNMLCLWSLGAELERYFGKWKFFGL--YLISGLGGCVADIIWC-RII 126
Query: 134 NHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVI-IHLMVP 192
N+ ++ Y + ++ ++ + R ++ ++ WI + + + +++P
Sbjct: 127 NNWLSASYGASGAIMGLIGALLVAQWRLGENMRGTII----------WIAITLAMPIIIP 176
Query: 193 NASFKGHLSGILVG 206
N +++ H+ G+++G
Sbjct: 177 NIAWQAHVGGLIIG 190
>gi|254445602|ref|ZP_05059078.1| peptidase, S54 (rhomboid) family, putative [Verrucomicrobiae
bacterium DG1235]
gi|198259910|gb|EDY84218.1| peptidase, S54 (rhomboid) family, putative [Verrucomicrobiae
bacterium DG1235]
Length = 286
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 62 TILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLI 116
+IL + + RL SAL HG MH +N+ +L G LE +G F+V+ +F I
Sbjct: 36 SILVDKQWDRLFSSALIHGSWMHAGFNLFALYSFGSALEIYYGWKTFLVIYAFSI 90
>gi|325923383|ref|ZP_08185053.1| uncharacterized membrane protein [Xanthomonas gardneri ATCC 19865]
gi|325546153|gb|EGD17337.1| uncharacterized membrane protein [Xanthomonas gardneri ATCC 19865]
Length = 241
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
+L+ A HG HL++NM++L + G LE+ +G +F+ + VC +++++
Sbjct: 74 QLLTYAFLHGGFNHLFFNMLALFMFGAALEQTWGQKRFLTYYLVCVAGAGVCQLLMAW 131
>gi|407478437|ref|YP_006792314.1| rhomboid family protein [Exiguobacterium antarcticum B7]
gi|407062516|gb|AFS71706.1| Rhomboid family protein [Exiguobacterium antarcticum B7]
Length = 248
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 86/212 (40%), Gaps = 38/212 (17%)
Query: 34 LILIQTLLYIMNVLAQPWD------SLGICISAHTILNQRDYKRLVLSALEHGDDMHLYY 87
ILIQ L+++ L ++ S G I + + ++ R+V + H D H+ +
Sbjct: 21 FILIQVALFVIEQLNAFFNLGFSPLSYGAAI--NLFIGNGEWWRVVTATFLHYDFWHIAF 78
Query: 88 NMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGF 147
N +LI+ LERM G +F SF ++ ++ V+ + + E + G
Sbjct: 79 NTFALIIFAPALERMIGHAKF---ASFYLLVGTLANVLTYFT------KINEPFYGQAGA 129
Query: 148 SAVLFSM--------KTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGH 199
S + + + RT S D + FS A+ A I L+ N S GH
Sbjct: 130 SGAILGLLGFYVYLGRFKRTVISADDARLVYIFS--AITA------IFTLLGSNVSVFGH 181
Query: 200 LSGILVGLCYTETSLGRLVERSGRSVSRVVNT 231
L G ++G G + +S +R NT
Sbjct: 182 LYGFVLGFL-----AGFIFGKSAVPFTRPFNT 208
>gi|188577743|ref|YP_001914672.1| peptidase, S54 (rhomboid) family [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188522195|gb|ACD60140.1| peptidase, S54 (rhomboid) family, putative [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 232
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
+L+ A HG HL++NM++L + G LE+ +G +F+ + VC +++++
Sbjct: 64 QLLTYAFLHGGFNHLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGVCQLLIAW 121
>gi|167763760|ref|ZP_02435887.1| hypothetical protein BACSTE_02140 [Bacteroides stercoris ATCC
43183]
gi|167697876|gb|EDS14455.1| peptidase, S54 family [Bacteroides stercoris ATCC 43183]
Length = 227
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWD-SLGICISAHTIL-NQRDYKRLVLSALEHGDDMH 84
IP T L++I L+++ ++AQ + L + H L + +L+ HG H
Sbjct: 4 IPTVTKNLLIINVLMFLGTIVAQSYGIDLNNYLGLHFFLAGDFNAAQLITYMFMHGGFTH 63
Query: 85 LYYNMVSLIVKGRELERMFGSVQFV 109
L++NM ++ + GR LE+++G +F+
Sbjct: 64 LFFNMFAVWMFGRILEQVWGPKRFL 88
>gi|167748326|ref|ZP_02420453.1| hypothetical protein ANACAC_03070 [Anaerostipes caccae DSM 14662]
gi|167652318|gb|EDR96447.1| peptidase, S54 family [Anaerostipes caccae DSM 14662]
Length = 280
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMV 90
T ++ I +Y+ + + + G H Q + RLV S H HL+ NM+
Sbjct: 100 TAVILTINIFMYLWSAASTEILNWGALTWMHA-FKQGELYRLVTSNFLHNGFDHLFNNMI 158
Query: 91 SLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAV 150
++ G LE +FG ++V L + +C ++S V Y+ ++ ++G S
Sbjct: 159 VFVLIGSRLEPIFGRARYVALY----MGAGLCGSIVSAVYYMNMGEMV----ASVGASGA 210
Query: 151 LFSM 154
+F +
Sbjct: 211 IFGL 214
>gi|366089319|ref|ZP_09455792.1| membrane-associated serine protease [Lactobacillus acidipiscis KCTC
13900]
Length = 217
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSLGICI----SAHTILNQRDYKRLVLSALEHGDDM 83
P T LI+I ++Y++ +A ++ + + + ++ Q ++ RL H
Sbjct: 7 PSATYFLIIINIIVYLLMTVAGGSENTNVLVFFGAKVNQLIGQGEWWRLFTPMFIHIGLQ 66
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVL 111
H+ NMV+L G ++E +FG +FV+L
Sbjct: 67 HIVLNMVTLYFIGIQIEAVFGKWRFVIL 94
>gi|389722438|ref|ZP_10189077.1| hypothetical protein UU5_04134 [Rhodanobacter sp. 115]
gi|388441874|gb|EIL98110.1| hypothetical protein UU5_04134 [Rhodanobacter sp. 115]
Length = 202
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 31 TLTLILIQTLLYIMNVLA----QPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLY 86
+L LILI + I++ +A Q D L + A + +R+Y RL+ L H D HL+
Sbjct: 2 SLVLILILAVTCIVSFIAFKNRQVMDDLILWPPA--VARKREYYRLLTYGLVHADGTHLF 59
Query: 87 YNMVSLIVKGRELERMFGS 105
+NM++L GR + ++ +
Sbjct: 60 FNMLTLFFFGRAMAPVYNA 78
>gi|169829737|ref|YP_001699895.1| hypothetical protein Bsph_4306 [Lysinibacillus sphaericus C3-41]
gi|168994225|gb|ACA41765.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
Length = 167
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 58 ISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLII 117
I A+ ++ + ++ R+ + H MH+++N SL + G ELE++ G +F+ + +
Sbjct: 6 IQANFLIQKGEWWRVFSAMFLHAGFMHMFFNTFSLYLFGPELEKIAGKARFITIY----L 61
Query: 118 STSVCYVMLSYVIY 131
+ + M +Y+ Y
Sbjct: 62 VSGIVGNMATYIFY 75
>gi|256422779|ref|YP_003123432.1| rhomboid family protein [Chitinophaga pinensis DSM 2588]
gi|256037687|gb|ACU61231.1| Rhomboid family protein [Chitinophaga pinensis DSM 2588]
Length = 203
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 27/114 (23%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFL 115
+ + + + ++ Y R + S L H + MHL +NM +L G +ER F
Sbjct: 30 LSMWPYLVKEKKQYYRFITSGLVHANFMHLAFNMFTLFFFGGFIERQFE----------- 78
Query: 116 IISTSVCYVMLSYVIYLMNHDVTEL--------YQC--------AIGFSAVLFS 153
+I S Y +L Y++ L+ D+ YQ A+ F+A+LF+
Sbjct: 79 VIFQSKLYYLLFYILGLILSDIPTFLKHRNNPDYQTIGASGAVSAVVFAAILFN 132
>gi|384049179|ref|YP_005497196.1| hypothetical protein BMWSH_5009 [Bacillus megaterium WSH-002]
gi|345446870|gb|AEN91887.1| Conserved membrane protein YdcA [Bacillus megaterium WSH-002]
Length = 200
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 12/115 (10%)
Query: 29 PGTLTLILIQTLLYIMNVLAQPWDSLGI--CISAHTILNQRDYKRLVLSALEHGDDMHLY 86
P T TLI I L+++ L I I +++++Q DY RL H HL
Sbjct: 16 PVTFTLICIHIALWLLAALPSHLAESFIHQLIGVNSLISQGDYWRLFTPIFLHLSFSHLL 75
Query: 87 YNMVSLIVKGRELERMFGSVQFVV----------LVSFLIISTSVCYVMLSYVIY 131
+N SL + G ER+ S +F++ +V+FLI S+ +V S I+
Sbjct: 76 FNSFSLFLLGPGAERILSSYKFLLFYLTCGLLGNIVTFLIQSSFYSHVGASGAIF 130
>gi|309811347|ref|ZP_07705134.1| peptidase, S54 family [Dermacoccus sp. Ellin185]
gi|308434654|gb|EFP58499.1| peptidase, S54 family [Dermacoccus sp. Ellin185]
Length = 311
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEH--GDDMHLYYN 88
T+ +I I L+++ + + D+L +S + + + R + S H G MHL +N
Sbjct: 93 TIGIIAICCLVWLGQLAS---DALYRDVSFVAVFARDEPWRYLTSGFAHDTGTPMHLLFN 149
Query: 89 MVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
M++L G+ LE + G V+F L ++ SV Y +++
Sbjct: 150 MMALYFMGQYLEPLIGRVRFGALYLLSVLGGSVVYQIMT 188
>gi|336272910|ref|XP_003351210.1| hypothetical protein SMAC_03513 [Sordaria macrospora k-hell]
gi|380092730|emb|CCC09483.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 291
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 16/182 (8%)
Query: 35 ILIQTLLYIMNVLAQPWD----SLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMV 90
+LI L +++ ++ + WD + G I + R+ H + H N++
Sbjct: 35 VLIIVLTWVLTLVGKSWDWDVKTWGALIPDE--IGIATLYRINTFPFIHLNIFHAVLNII 92
Query: 91 SLIVKGRELERMFGSVQFVVLV--SFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFS 148
+ E+ G++ V L F I + YV + I N V A +
Sbjct: 93 AFTPLLERFEQEHGTLTAVALFFGPFATIP-GLIYVFIERFILHANTPV----MGASMWV 147
Query: 149 AVLFSMKTIRT-RQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGL 207
+L M+ IRT + +P T + +++P P + +V+ ++P++SF GHL+G+LVG
Sbjct: 148 FLLLGMEAIRTYKTNPYFT--ISTYNIPTWITPLLLVVVTAALLPSSSFLGHLAGLLVGY 205
Query: 208 CY 209
+
Sbjct: 206 GF 207
>gi|387927974|ref|ZP_10130652.1| hypothetical protein PB1_05942 [Bacillus methanolicus PB1]
gi|387587560|gb|EIJ79882.1| hypothetical protein PB1_05942 [Bacillus methanolicus PB1]
Length = 201
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL 111
+ +Y RLV L H H+ +N SLI+ G LER+ G +FV+L
Sbjct: 55 EGEYWRLVTPILLHSGFPHMLFNSFSLILFGPALERIIGKNKFVIL 100
>gi|297570706|ref|YP_003696480.1| rhomboid family protein [Arcanobacterium haemolyticum DSM 20595]
gi|296931053|gb|ADH91861.1| Rhomboid family protein [Arcanobacterium haemolyticum DSM 20595]
Length = 210
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 20/152 (13%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
+ + + R + A H MH+ +N+++LI G ELE S +F L I +
Sbjct: 57 LFAEAEPWRFLTGAFLHSGFMHILFNVMALIFLGAELEPALKSGRFAALYLGSAIGGNAA 116
Query: 123 YVMLSYVIYLMNHDVTELYQCAIGFSAV---LFSMKTIRTRQ-SPDVTHQLLNFSVPAVY 178
+Y + E A+G S LF + TR D+ L+ + A
Sbjct: 117 -------VYAWSAWTGEWNTAAVGASGAIFGLFGALIVLTRALHTDMRGILILLGINA-- 167
Query: 179 APWIELVIIHLMVPNASFKGHLSGILVGLCYT 210
+I + P S++ HL G L G+ T
Sbjct: 168 -------LIAITTPQISWQAHLGGFLTGIILT 192
>gi|261203681|ref|XP_002629054.1| rhomboid protein 2 [Ajellomyces dermatitidis SLH14081]
gi|239586839|gb|EEQ69482.1| rhomboid protein 2 [Ajellomyces dermatitidis SLH14081]
gi|239608127|gb|EEQ85114.1| rhomboid protein 2 [Ajellomyces dermatitidis ER-3]
Length = 270
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 17/204 (8%)
Query: 79 HGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL-VSFLIISTSVCYVMLSYVIYLMNHDV 137
H H ++N+V+L E G++ V L V L + Y++ VI N V
Sbjct: 73 HNGLFHTFWNIVALTPLLERFEAEHGTLTSVALFVGPLSTLPAGLYLLFEKVILRGNTAV 132
Query: 138 TELYQCAIGFSAVLF---SMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNA 194
+G S +F ++ I+T Q+ + + + +P P + ++++ +VPN
Sbjct: 133 -------LGSSVWIFLLLGIEAIKTFQT-NPHFVIGTYRIPTWTTPLLLVILVFALVPNT 184
Query: 195 SFKGHLSGILVGLCYTETSLGRLVERSGRSVSRVVNTLTNVFKLDDDCNGDDEDSDTSAS 254
S GHLSG+ VG + L LV + R + N+ + D+ +
Sbjct: 185 SLLGHLSGLAVGYVFGLGYLKFLVPP--EKILRWIEGKLNLLAILPHYVSVDQKTYGRYG 242
Query: 255 FLD---FTDNTKNDAATIVSASSR 275
L F N + A ++ S++
Sbjct: 243 ILPTRSFGSNEETGAISLPLGSTQ 266
>gi|255326468|ref|ZP_05367550.1| rhomboid family protein [Rothia mucilaginosa ATCC 25296]
gi|255296508|gb|EET75843.1| rhomboid family protein [Rothia mucilaginosa ATCC 25296]
Length = 276
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 31 TLTLILIQTLLY-IMNVLAQPWDSLGICISAHTIL-----NQRDYKRLVLSALEHG--DD 82
+ TLILI +Y + ++ W + H ++ +Y R++ H D
Sbjct: 81 SYTLILITVAMYGLQQLIPNEW------VVRHGVIWWPYVQHGEYYRIISYGFLHAQNDP 134
Query: 83 MHLYYNMVSLIVKGRELERMFGSVQFV 109
MHL +NM++L + G LERM G +F+
Sbjct: 135 MHLVWNMINLFIYGVSLERMMGRWKFL 161
>gi|374386348|ref|ZP_09643848.1| hypothetical protein HMPREF9449_02234 [Odoribacter laneus YIT
12061]
gi|373224277|gb|EHP46617.1| hypothetical protein HMPREF9449_02234 [Odoribacter laneus YIT
12061]
Length = 272
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYK---RLVLSALEHGDDM 83
I P LI+I ++Y++ ++ + + L Q +Y + + HG
Sbjct: 10 ITPAVKILIIINVIMYLLTLMFDKRTGTNLSNTLGLHLPQSEYWAPYQYITHMFMHGSFT 69
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVV 110
HL++NM +L + GR LE ++G+ +F+V
Sbjct: 70 HLFFNMFALFMFGRVLESVWGTNRFLV 96
>gi|392390248|ref|YP_006426851.1| hypothetical protein Ornrh_0861 [Ornithobacterium rhinotracheale
DSM 15997]
gi|390521326|gb|AFL97057.1| putative membrane protein [Ornithobacterium rhinotracheale DSM
15997]
Length = 187
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 62 TILNQRDYKRLVLSALEHGDDMHLYYNMVSLIV 94
IL+Q+ Y R+ S H D MHL++NM +L V
Sbjct: 36 AILDQKQYDRIFTSGFIHADGMHLFFNMFALYV 68
>gi|315446599|ref|YP_004079478.1| hypothetical protein Mspyr1_51170 [Mycobacterium gilvum Spyr1]
gi|315264902|gb|ADU01644.1| uncharacterized membrane protein [Mycobacterium gilvum Spyr1]
Length = 279
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 78/187 (41%), Gaps = 24/187 (12%)
Query: 25 HLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMH 84
L P T LI I L + + +A P + + + + Y RL+ SA H H
Sbjct: 64 KLTPVVTYALIGINLLAFALQ-MASPGLQRAFGLWSPAVADGEMY-RLLTSAFLHFGLTH 121
Query: 85 LYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCA 144
L +NM++L G LE G +FV L + SV ++YL+ + L A
Sbjct: 122 LAFNMLALYFVGPPLEAALGRARFVTLYLVSALGGSV-------LVYLLTFN--ALTAGA 172
Query: 145 IGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVP-----NASFKGH 199
G LF + R+ LN V +V A + + ++P N S++GH
Sbjct: 173 SGAVFGLFGATFVVGRK--------LNMDVRSVMAIIVLNLAFTFLIPLFTSQNISWQGH 224
Query: 200 LSGILVG 206
+ G++ G
Sbjct: 225 IGGLVTG 231
>gi|294497058|ref|YP_003560758.1| peptidase, S54 (rhomboid) family protein [Bacillus megaterium QM
B1551]
gi|294346995|gb|ADE67324.1| peptidase, S54 (rhomboid) family protein [Bacillus megaterium QM
B1551]
Length = 200
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 12/115 (10%)
Query: 29 PGTLTLILIQTLLYIMNVLAQPWDSLGI--CISAHTILNQRDYKRLVLSALEHGDDMHLY 86
P T TLI I L+++ L I I +++++Q DY RL H HL
Sbjct: 16 PVTFTLICIHIALWLLAALPSHLAESFIHQLIGVNSLISQGDYWRLFTPIFLHLSFSHLL 75
Query: 87 YNMVSLIVKGRELERMFGSVQFVV----------LVSFLIISTSVCYVMLSYVIY 131
+N SL + G ER+ S +F++ +V+FLI S+ +V S I+
Sbjct: 76 FNSFSLFLLGPGAERILSSYKFLLFYLTCGLLGNIVTFLIQSSFYSHVGASGAIF 130
>gi|408387854|gb|EKJ67557.1| hypothetical protein FPSE_12265 [Fusarium pseudograminearum CS3096]
Length = 267
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 12/140 (8%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIIS-TSVCYVMLSYV 129
RL L H + +H N+++L E G++ + L + S +V YV++
Sbjct: 63 RLSTFPLIHLNVIHAILNLLALTPLMERFETEHGTLTSLALFFGPLTSIPAVVYVLIERC 122
Query: 130 IYLMNHDVTELYQCAIGFSAVLF---SMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVI 186
I+ NH V +G S +F +M++I+T +S + + + ++P P I ++
Sbjct: 123 IFRANHGV-------LGASMWVFTLLAMESIQTYKS-NPHFVIGSVNIPTWTTPLIMSLV 174
Query: 187 IHLMVPNASFKGHLSGILVG 206
+ ++P S GHL GI +G
Sbjct: 175 VAALIPGTSLLGHLCGIAIG 194
>gi|317472135|ref|ZP_07931467.1| rhomboid family protein [Anaerostipes sp. 3_2_56FAA]
gi|316900539|gb|EFV22521.1| rhomboid family protein [Anaerostipes sp. 3_2_56FAA]
Length = 309
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMV 90
T ++ I +Y+ + + + G H Q + RLV S H HL+ NM+
Sbjct: 129 TAVILTINIFMYLWSAASTEILNWGALTWMHA-FKQGELYRLVTSNFLHNGFDHLFNNMI 187
Query: 91 SLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAV 150
++ G LE +FG ++V L + +C ++S V Y+ ++ ++G S
Sbjct: 188 VFVLIGSRLEPIFGRARYVALY----MGAGLCGSIVSAVYYMNMGEMV----ASVGASGA 239
Query: 151 LFSM 154
+F +
Sbjct: 240 IFGL 243
>gi|89099491|ref|ZP_01172367.1| hypothetical protein B14911_19975 [Bacillus sp. NRRL B-14911]
gi|89085877|gb|EAR65002.1| hypothetical protein B14911_19975 [Bacillus sp. NRRL B-14911]
Length = 196
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 65/153 (42%), Gaps = 11/153 (7%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCY 123
+ + + RL H H+ +N SL++ G LER+ G +F + IS +V
Sbjct: 53 IREGEVWRLATPIFMHSGFTHVLFNSFSLVLFGPALERIAGKAKFAGIYLITGISANVAT 112
Query: 124 VMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIE 183
++L + Y ++ F+AV + K + +R++ + ++ +V + +I+
Sbjct: 113 LLLEPLTYTHVGSSGAIFGLFGFFAAVAYFRKDLMSRENSQI---IITIAVIGLIMTFIQ 169
Query: 184 LVIIHLMVPNASFKGHLSGILVGLCYTETSLGR 216
PN + H+ G + G SL R
Sbjct: 170 --------PNINISAHIFGFISGFLIGALSLKR 194
>gi|319957644|ref|YP_004168907.1| rhomboid family protein [Nitratifractor salsuginis DSM 16511]
gi|319420048|gb|ADV47158.1| Rhomboid family protein [Nitratifractor salsuginis DSM 16511]
Length = 230
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 29 PGTLTLILIQTLLYIMNVLAQ------PWDSLGIC--ISAHTILNQRDYKRLVLSALEHG 80
P T LIL+ L Y+ ++ P SL C + A +L ++ RL+ HG
Sbjct: 8 PLTWGLILLSLLGYVAELICGGSWSDIPVSSLIACGGVYAPAVLEGGEWWRLLSGLFLHG 67
Query: 81 DDMHLYYNMVSLIVKGRELERMFGSVQFVVL 111
HL NM+SL + GR +E F + +++L
Sbjct: 68 GPEHLALNMISLYIVGRIVELYFPLLDYLIL 98
>gi|410984558|ref|XP_003998595.1| PREDICTED: rhomboid domain-containing protein 2 [Felis catus]
Length = 364
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 15/172 (8%)
Query: 46 VLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
+L P G+ + + + N + Y RLV + + + L + + ER G+
Sbjct: 38 LLQPPLAPSGLSLRSEALRNWQVY-RLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGT 96
Query: 106 VQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-----AIGFSAVLFSMKTIRTR 160
V+ +V + + S +I+L V+ L + A GF+ V F+M + +
Sbjct: 97 VRHCFF--------TVIFAIFSAIIFLSFEAVSSLSKLGEVEDARGFTPVAFAMLGVNSV 148
Query: 161 QSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYTET 212
+S + VP++ PW+ L+ ++P SF ++ G+ +GL Y T
Sbjct: 149 RSRMRRALVFGMVVPSMLVPWL-LLCASWLIPQTSFLSNVCGLGIGLTYGLT 199
>gi|257453937|ref|ZP_05619213.1| S54 family peptidase [Enhydrobacter aerosaccus SK60]
gi|257448602|gb|EEV23569.1| S54 family peptidase [Enhydrobacter aerosaccus SK60]
Length = 291
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL 111
RLV S H MHL +NM +L G+ ERMFG+V F+ L
Sbjct: 64 RLVTSLFLHIGFMHLLFNMFALYYFGQVAERMFGAVNFLGL 104
>gi|313149277|ref|ZP_07811470.1| rhomboid family protein [Bacteroides fragilis 3_1_12]
gi|423280878|ref|ZP_17259790.1| hypothetical protein HMPREF1203_04007 [Bacteroides fragilis HMW
610]
gi|424665525|ref|ZP_18102561.1| hypothetical protein HMPREF1205_01400 [Bacteroides fragilis HMW
616]
gi|313138044|gb|EFR55404.1| rhomboid family protein [Bacteroides fragilis 3_1_12]
gi|404574769|gb|EKA79517.1| hypothetical protein HMPREF1205_01400 [Bacteroides fragilis HMW
616]
gi|404583519|gb|EKA88197.1| hypothetical protein HMPREF1203_04007 [Bacteroides fragilis HMW
610]
Length = 224
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 13/121 (10%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTIL-----NQRDYKRLVLSALEHGD 81
+P T LI+I LL++ ++AQ S GI +S + L + + +L HG
Sbjct: 1 MPTVTKNLIIINVLLFLGQLVAQ---SYGINLSDYLGLHFFLADNFNPAQLFTYMFMHGG 57
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
H+++NM ++ + GR LE+++G +F+ + + ++ Y+ Y VTEL
Sbjct: 58 FSHIFFNMFAVWMFGRILEQVWGPKRFLFYYILCGVGAGLLQEVVQYIQY-----VTELS 112
Query: 142 Q 142
Q
Sbjct: 113 Q 113
>gi|159481362|ref|XP_001698748.1| hypothetical protein CHLREDRAFT_151844 [Chlamydomonas reinhardtii]
gi|158273459|gb|EDO99248.1| predicted protein [Chlamydomonas reinhardtii]
Length = 180
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 145 IGFSAVLFS-MKTIRTRQSPDVTHQLLNF-SVPAVYAPWIELVIIHLMVPNASFKGHLSG 202
+G+S VLF M I + LL SVP V AP++ + L++PNAS GHLSG
Sbjct: 115 VGYSGVLFGQMAFIAWTAGSEGRFNLLGLTSVPMVLAPFLLAGLTQLIMPNASALGHLSG 174
>gi|163815032|ref|ZP_02206419.1| hypothetical protein COPEUT_01188 [Coprococcus eutactus ATCC 27759]
gi|158449715|gb|EDP26710.1| peptidase, S54 family [Coprococcus eutactus ATCC 27759]
Length = 377
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 25 HLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMH 84
+IP T+TLIL + IM + + G + LN ++Y RL+ S H H
Sbjct: 50 RMIPIVTITLILANVIAGIMCIGVDNYSRTGGLNYEYVKLN-KEYGRLLSSMFLHSGFDH 108
Query: 85 LYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
L NM +L + G +E+ GS++ ++ I + + + LS+V+
Sbjct: 109 LVGNMFALFMFGSTVEKKLGSLRMTIIYFVSGIVSGLISMNLSHVM 154
>gi|327401074|ref|YP_004341913.1| peptidase S54, rhomboid domain-containing protein [Archaeoglobus
veneficus SNP6]
gi|327316582|gb|AEA47198.1| Peptidase S54, rhomboid domain protein [Archaeoglobus veneficus
SNP6]
Length = 262
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 79 HGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVT 138
HG H NM+ L+ G ELER G ++ + I+ ++ Y++ +Y
Sbjct: 121 HGSFDHYLVNMIVLLFFGSELERRAGGNNYLKIFFLSGIAGNLAYLLFAY-------STG 173
Query: 139 ELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIH--LMVPNASF 196
ELY A+G S ++ + +P++ L F +P + L + M+P ++
Sbjct: 174 ELYP-ALGASGAIYGIMGTLAIIAPEI-RVLFFFMIPMGIRTALLLFAAYDLFMLPFSAQ 231
Query: 197 KG-----HLSGILVGLCYTET 212
G HL+G+LVGL Y +
Sbjct: 232 TGVAHAAHLAGLLVGLYYGKK 252
>gi|294506674|ref|YP_003570732.1| rhomboid family protein [Salinibacter ruber M8]
gi|294343002|emb|CBH23780.1| Rhomboid family protein [Salinibacter ruber M8]
Length = 317
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 87/218 (39%), Gaps = 28/218 (12%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQ------RDYKRLVLSALEHGD 81
PP T+I I ++++ W + + + +H L+ + +LV + H
Sbjct: 21 PPALRTIITINVVVWVALQFLNLWSTGLMFVRSHLALHPVFPDILLEPWQLVTYSFMHTG 80
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
H+ NM+ L GRE ERM GS QF + ++T+V ++ ++ + ++
Sbjct: 81 LFHIGINMLLLFWVGREFERMHGSDQFWSVY----LTTAVGGALICLLLSPIAPSISGGM 136
Query: 142 QCA-----IGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMV----- 191
Q +G SA + + T P +LL F V P + +VI L +
Sbjct: 137 QGGRSIPVLGASASVLGVLTTVAILYPYKQIRLLFFGV----VPLLWVVIGFLGIDALMA 192
Query: 192 ----PNASFKGHLSGILVGLCYTETSLGRLVERSGRSV 225
N + H G L G Y ++ G L G V
Sbjct: 193 LRPGGNTAVAAHWGGALTGFLYAKSQQGALGTLPGIGV 230
>gi|403238266|ref|ZP_10916852.1| S54 family peptidase [Bacillus sp. 10403023]
Length = 239
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 40 LLYIMNVLAQPWDS--LGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGR 97
L+++ L+ P+ + L I + ++++ +Y RLV H H+ +N SL++ G
Sbjct: 27 FLWLLIFLSLPFGTTLLQQMIGFNFLISEGEYWRLVTPIFVHSGFGHMLFNSFSLVLFGP 86
Query: 98 ELERMFGSVQFVVL 111
LE M G V+F V+
Sbjct: 87 ALESMLGKVKFTVV 100
>gi|255037309|ref|YP_003087930.1| rhomboid family protein [Dyadobacter fermentans DSM 18053]
gi|254950065|gb|ACT94765.1| Rhomboid family protein [Dyadobacter fermentans DSM 18053]
Length = 206
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 56 ICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMF 103
+ ++ + + + +Y R + S H D HL +NM+SL G +ER+F
Sbjct: 28 LILNPYRVTQRNEYYRFITSGFVHADFGHLIFNMLSLWFVGESIERLF 75
>gi|397671735|ref|YP_006513270.1| peptidase, S54 family [Propionibacterium propionicum F0230a]
gi|395143082|gb|AFN47189.1| peptidase, S54 family [Propionibacterium propionicum F0230a]
Length = 272
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 69 YKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVV--LVSFLIISTSVCYVML 126
+ +++ +A H D +H+ +NMV+L V G +LE + G +F+ LVS L S +V +
Sbjct: 107 WWQVLTNAFTHLDVIHIAFNMVALYVLGPQLESVLGRARFLALYLVSALTGSAAVVWFSA 166
Query: 127 SY 128
Y
Sbjct: 167 PY 168
>gi|400289188|ref|ZP_10791220.1| rhomboid-like protein [Psychrobacter sp. PAMC 21119]
Length = 202
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQF-VVLVSFLIISTSVC 122
+N + R V H D MHL +NM +L GR +E ++ S F V F +++ +
Sbjct: 36 VNNGQWDRFVTHGFIHADSMHLLFNMFTLYFFGRAIEGLYQSFLFGYGFVVFYVLAIIIA 95
Query: 123 YVMLSYVIYLMNHDVTELYQCAIGFSAVLFSM 154
++ SY+ N L + G SAVLF+
Sbjct: 96 -MIPSYIKNKNNASYLSL-GASGGVSAVLFAF 125
>gi|384418691|ref|YP_005628051.1| integral membrane protein [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353461604|gb|AEQ95883.1| integral membrane protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 232
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
+L+ A HG HL++NM++L + G LE+ +G +F+ + VC +++++
Sbjct: 64 QLLTYAFLHGGFNHLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVACAGVCQLLMAW 121
>gi|302851004|ref|XP_002957027.1| hypothetical protein VOLCADRAFT_45044 [Volvox carteri f.
nagariensis]
gi|300257583|gb|EFJ41829.1| hypothetical protein VOLCADRAFT_45044 [Volvox carteri f.
nagariensis]
Length = 194
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 29 PGT--LTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLY 86
PGT +T + + L+++ P + +S H + + R ++S + H + +HL
Sbjct: 6 PGTSAVTALCVGVWLWLLQRGVSP---AAVGLSYHRFVTDHQWWRALISQICHFELLHLV 62
Query: 87 YNMVSL-----IVKGRELE-RMFGSVQFVVLV---SFLIISTSVCYVMLSYVIYLMNHDV 137
N+ SL + +G E G+ + LV +L +S + + + L + V
Sbjct: 63 LNISSLWGLAALAEGAPAEDSASGAARGPSLVPTLEYLRVSLLLLLTCAAICLALHHVAV 122
Query: 138 TEL------YQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFS-VPAVYAPWIELVIIHLM 190
L + +G+S VLF T+ LL +S V A AP++ L++ +
Sbjct: 123 AVLGLERFRHSLLVGYSGVLFGWMTLIAWGEFRGGFSLLGWSSVSATVAPFLLLLVTQAL 182
Query: 191 VPNASFKGHLSG 202
+P ASF GHLSG
Sbjct: 183 LPTASFLGHLSG 194
>gi|325677503|ref|ZP_08157167.1| rhomboid family protein [Rhodococcus equi ATCC 33707]
gi|325551750|gb|EGD21448.1| rhomboid family protein [Rhodococcus equi ATCC 33707]
Length = 300
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 17/133 (12%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
++ R+V S H MHL NM +L V GR+ E + G ++ + ++ S +ML
Sbjct: 131 EFSRIVTSGFLHIGLMHLAVNMFALYVIGRDTEMVLGRARYFAVYVIALLGGSASVLMLD 190
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVII 187
++ + +G AV+ +R ++SP ++ + VII
Sbjct: 191 PLVP--TAGASGAIFGLLGAQAVIL----LRLKRSPTPVLAVIAIN-----------VII 233
Query: 188 HLMVPNASFKGHL 200
+ +P S GH+
Sbjct: 234 SITIPGISLWGHM 246
>gi|198274049|ref|ZP_03206581.1| hypothetical protein BACPLE_00186 [Bacteroides plebeius DSM 17135]
gi|198273127|gb|EDY97396.1| peptidase, S54 family [Bacteroides plebeius DSM 17135]
Length = 297
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 84/209 (40%), Gaps = 13/209 (6%)
Query: 32 LTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVS 91
L + L+Q L + NVLA PW + + + A T R L+ H +H+ +NM+
Sbjct: 32 LVVTLVQIFLTLFNVLASPWMNY-LELPAWTETFIRRPWTLITYMFMHAGVLHILFNMLW 90
Query: 92 LIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVL 151
L GR F S L I + Y ML+Y ++ DV +G SA +
Sbjct: 91 LFWFGRLFLAFFSSKHLRGLYFLGGICGGLLY-MLAYNVFPYFQDVV-YSSYLLGASASV 148
Query: 152 FSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKG----HLSGILVGL 207
++ + + P+ Q L + + +V + L+ + G HL G L G
Sbjct: 149 LAIVVAVSVREPNYPVQFLFIGTVRLKYVALFMVALDLLFMTSENAGGHIAHLGGALAGW 208
Query: 208 CYTETSLGRLVERSGRSVSRVVNTLTNVF 236
+ +SG ++ +N + + F
Sbjct: 209 WFAAGL------QSGHDATKWINLVCDWF 231
>gi|242051116|ref|XP_002463302.1| hypothetical protein SORBIDRAFT_02g041460 [Sorghum bicolor]
gi|241926679|gb|EER99823.1| hypothetical protein SORBIDRAFT_02g041460 [Sorghum bicolor]
Length = 315
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 88 NMVSLIVKGRELERMFGSVQ---FVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCA 144
+++ L++ G+ LE ++GS + F+ +V+F STS C M + V+Y + LY
Sbjct: 81 SIIGLLLFGKLLEPLWGSKELSKFIFIVNF---STSACVFMTAIVLYYITQQEIYLYTPL 137
Query: 145 IGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWI 182
GF VL + + PD Q LN + + A WI
Sbjct: 138 SGFYGVLSGLLVGIKQLLPD---QELNLFLLKIKAKWI 172
>gi|329956610|ref|ZP_08297183.1| peptidase, S54 family [Bacteroides clarus YIT 12056]
gi|328523982|gb|EGF51058.1| peptidase, S54 family [Bacteroides clarus YIT 12056]
Length = 227
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWD-SLGICISAHTIL-NQRDYKRLVLSALEHGDDMH 84
IP T L++I L+++ ++AQ + L + H L + +L+ HG H
Sbjct: 4 IPTVTKNLLIINVLMFLGTLVAQNYGIDLNKYLGLHFFLAGDFNAAQLITYMFMHGGFTH 63
Query: 85 LYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIY 131
L++NM ++ + GR LE+++G +F+ I + ++ Y+ Y
Sbjct: 64 LFFNMFAVWMFGRILEQVWGPKRFLFYYLACGIGAGIIQELVQYIHY 110
>gi|333383754|ref|ZP_08475409.1| hypothetical protein HMPREF9455_03575 [Dysgonomonas gadei ATCC
BAA-286]
gi|332827349|gb|EGK00109.1| hypothetical protein HMPREF9455_03575 [Dysgonomonas gadei ATCC
BAA-286]
Length = 251
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSAL-EHGDDMHL 85
IP T L++I L Y V+ + +L +S H I + +++ + HG HL
Sbjct: 13 IPVVTRNLLIINVLAYFATVMLKDIVNLNNYLSLHYITSSLFMPHQIITYMFMHGGISHL 72
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYV 129
++NM ++ + GR LE ++G +F V I + ++++Y+
Sbjct: 73 FFNMFAVFMFGRVLETVWGPKKFFVYYIITGIGAAALQILVTYL 116
>gi|283457105|ref|YP_003361668.1| membrane protein [Rothia mucilaginosa DY-18]
gi|283133083|dbj|BAI63848.1| uncharacterized membrane protein [Rothia mucilaginosa DY-18]
Length = 188
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 59/147 (40%), Gaps = 29/147 (19%)
Query: 68 DYKRLVLSALEH--GDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
+Y RL+ H D MHL +NM+ L + G LERM G +F+ + + + +
Sbjct: 28 EYYRLISYGFLHSQNDPMHLVWNMIYLFIFGVSLERMMGRWKFLFVYMAATVGAGLSVYI 87
Query: 126 LSYVIYLMNHDVTELYQCAIGFSAVLFSMKT------IRTRQSPDVTHQLLNFSVPAVYA 179
+Y Y+ A+G S ++ + + RQ +L +
Sbjct: 88 FAY------------YRGAVGASGGVYGLYGAFFVILLLRRQKDTARLFILLIGIG---- 131
Query: 180 PWIELVIIHLMVPNASFKGHLSGILVG 206
V+ +L P+ S GH G++ G
Sbjct: 132 -----VVQNLFTPHISHAGHFGGLVSG 153
>gi|421186400|ref|ZP_15643793.1| membrane-associated serine protease [Oenococcus oeni AWRIB418]
gi|399967353|gb|EJO01835.1| membrane-associated serine protease [Oenococcus oeni AWRIB418]
Length = 241
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 37/181 (20%)
Query: 25 HLIPPGTLTLILIQTLLYIMNVL--AQPWDSLGICISAHTILN----------------- 65
IPP TL++ I +Y V A + S G+ + +N
Sbjct: 7 RFIPPVTLSIFSITVFIYFFQVFFDAYLFHSFGLFSLINRFINGPSIQSSILLGGQVSSL 66
Query: 66 --QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCY 123
+ + RL H MH++ NM +LI+ G +E++FG +++ LI S +
Sbjct: 67 ILKGQWYRLFTPIFLHSSLMHIFSNMFTLIIFGPFVEKLFGKTKYL-----LIYLLSGLW 121
Query: 124 VMLSYVIYLMNHDVTELYQCAIGFSAVLF----SMKTIR--TRQSPDVTHQLLNFSVPAV 177
L +I+ N ++ ++G S LF +M +I R +P QL+ F+ A+
Sbjct: 122 GNLLTLIFDPNPNIV-----SVGASGALFGLFGAMISIAWFNRNNPIFKRQLVVFAALAL 176
Query: 178 Y 178
+
Sbjct: 177 F 177
>gi|257064883|ref|YP_003144555.1| membrane protein [Slackia heliotrinireducens DSM 20476]
gi|256792536|gb|ACV23206.1| uncharacterized membrane protein [Slackia heliotrinireducens DSM
20476]
Length = 267
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 29 PGTLTLILIQTLLY-IMNVLA--QPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHL 85
P T +LI+I +++ ++ VL Q + + + L Y L+ S HG MHL
Sbjct: 9 PLTCSLIVINVVVFAVLEVLGMTQGYTLYNAGVLTTSSLLDGQYYTLITSMFLHGGLMHL 68
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAI 145
NM+++ G +E +FG V+F++ + FL + + + S + + + + +
Sbjct: 69 LCNMITMYYIGTVIEDVFGPVRFLI-IYFL---SGIAGGLTSMAVMIAAGENGGV----V 120
Query: 146 GFSAVLFSMKT------IRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGH 199
G S LF + +R + P V + + S + ++ L II + P + + H
Sbjct: 121 GASGALFGLFGAYGYLLVREHRKPVVFMRPTSSSDLKGFFGFLVLNIIIGLTPGIAMEAH 180
Query: 200 LSGILVGL 207
+ G++ GL
Sbjct: 181 IGGMICGL 188
>gi|419758894|ref|ZP_14285206.1| membrane-associated serine protease [Oenococcus oeni AWRIB304]
gi|419857800|ref|ZP_14380503.1| membrane-associated serine protease [Oenococcus oeni AWRIB202]
gi|421185357|ref|ZP_15642768.1| membrane-associated serine protease [Oenococcus oeni AWRIB318]
gi|421188834|ref|ZP_15646166.1| membrane-associated serine protease [Oenococcus oeni AWRIB419]
gi|421189623|ref|ZP_15646937.1| membrane-associated serine protease [Oenococcus oeni AWRIB422]
gi|421190919|ref|ZP_15648203.1| membrane-associated serine protease [Oenococcus oeni AWRIB548]
gi|421193560|ref|ZP_15650806.1| membrane-associated serine protease [Oenococcus oeni AWRIB553]
gi|421195397|ref|ZP_15652605.1| membrane-associated serine protease [Oenococcus oeni AWRIB568]
gi|421197510|ref|ZP_15654685.1| membrane-associated serine protease [Oenococcus oeni AWRIB576]
gi|399904349|gb|EJN91805.1| membrane-associated serine protease [Oenococcus oeni AWRIB304]
gi|399964167|gb|EJN98821.1| membrane-associated serine protease [Oenococcus oeni AWRIB419]
gi|399964538|gb|EJN99179.1| membrane-associated serine protease [Oenococcus oeni AWRIB318]
gi|399971719|gb|EJO05958.1| membrane-associated serine protease [Oenococcus oeni AWRIB553]
gi|399972713|gb|EJO06912.1| membrane-associated serine protease [Oenococcus oeni AWRIB422]
gi|399973615|gb|EJO07780.1| membrane-associated serine protease [Oenococcus oeni AWRIB548]
gi|399975119|gb|EJO09187.1| membrane-associated serine protease [Oenococcus oeni AWRIB576]
gi|399975822|gb|EJO09857.1| membrane-associated serine protease [Oenococcus oeni AWRIB568]
gi|410497271|gb|EKP88746.1| membrane-associated serine protease [Oenococcus oeni AWRIB202]
Length = 241
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 37/181 (20%)
Query: 25 HLIPPGTLTLILIQTLLYIMNVL--AQPWDSLGICISAHTILN----------------- 65
IPP TL++ I +Y V A + S G+ + +N
Sbjct: 7 RFIPPVTLSIFSITVFIYFFQVFFDAYLFHSFGLFSLINRFINGPSIQSLILLGGQVSSL 66
Query: 66 --QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCY 123
+ + RL H MH++ NM +LI+ G +E++FG +++ LI S +
Sbjct: 67 ILKGQWYRLFTPIFLHSSLMHIFSNMFTLIIFGPFVEKLFGKTKYL-----LIYLLSGLW 121
Query: 124 VMLSYVIYLMNHDVTELYQCAIGFSAVLF----SMKTIR--TRQSPDVTHQLLNFSVPAV 177
L +I+ N ++ ++G S LF +M +I R +P QL+ F+ A+
Sbjct: 122 GNLLTLIFDPNPNIV-----SVGASGALFGLFGAMISIAWFNRNNPIFKRQLVVFAALAL 176
Query: 178 Y 178
+
Sbjct: 177 F 177
>gi|228469447|ref|ZP_04054455.1| rhomboid family protein [Porphyromonas uenonis 60-3]
gi|228309022|gb|EEK17665.1| rhomboid family protein [Porphyromonas uenonis 60-3]
Length = 240
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 27 IPPGTLTLILIQTLLYI-MNVLAQPWDSLGICISAHTILNQRDYKRLVLSALE-HGDDMH 84
IPP TL L++I L Y+ VL + L + H + + +S + HG H
Sbjct: 12 IPPVTLNLLIINVLCYLAQQVLPRVGIDLTGLLGLHYVTAHDFHVWQPISYMFLHGSFTH 71
Query: 85 LYYNMVSLIVKGRELERMFGSVQFVVL 111
L++NM +L + G +ER +G+ +F++
Sbjct: 72 LFFNMFALFMFGTTIERTWGAKRFLLF 98
>gi|399524860|ref|ZP_10765362.1| peptidase, S54 family [Atopobium sp. ICM58]
gi|398373815|gb|EJN51650.1| peptidase, S54 family [Atopobium sp. ICM58]
Length = 292
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 19/140 (13%)
Query: 75 SALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMN 134
A HG H+ +NM+SL GR +E G +F+ L + S +++I
Sbjct: 118 GAFLHGGITHILFNMLSLYWVGRAIEPAMGRWRFLALYLVSALGGS------AFIIAWCL 171
Query: 135 HDVTELYQCAIGFSAVLFSM----KTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLM 190
+E++ +G S +F + ++ D T L + VY M
Sbjct: 172 IQPSEIFVSTVGASGAVFGLFGAVFVLQRLGGSDTTVILTLLGINLVYG---------FM 222
Query: 191 VPNASFKGHLSGILVGLCYT 210
V S++GH+ G + G+ T
Sbjct: 223 VSGISWQGHIGGAIAGVAAT 242
>gi|60683641|ref|YP_213785.1| rhomboid family protein [Bacteroides fragilis NCTC 9343]
gi|265767352|ref|ZP_06095018.1| rhomboid family protein [Bacteroides sp. 2_1_16]
gi|336411621|ref|ZP_08592085.1| hypothetical protein HMPREF1018_04103 [Bacteroides sp. 2_1_56FAA]
gi|375360472|ref|YP_005113244.1| putative transmembrane rhomboid family protein [Bacteroides
fragilis 638R]
gi|383119731|ref|ZP_09940469.1| hypothetical protein BSHG_3456 [Bacteroides sp. 3_2_5]
gi|423251853|ref|ZP_17232861.1| hypothetical protein HMPREF1066_03871 [Bacteroides fragilis
CL03T00C08]
gi|423252833|ref|ZP_17233764.1| hypothetical protein HMPREF1067_00408 [Bacteroides fragilis
CL03T12C07]
gi|423259870|ref|ZP_17240793.1| hypothetical protein HMPREF1055_03070 [Bacteroides fragilis
CL07T00C01]
gi|423267525|ref|ZP_17246506.1| hypothetical protein HMPREF1056_04193 [Bacteroides fragilis
CL07T12C05]
gi|423271973|ref|ZP_17250942.1| hypothetical protein HMPREF1079_04024 [Bacteroides fragilis
CL05T00C42]
gi|423276022|ref|ZP_17254965.1| hypothetical protein HMPREF1080_03618 [Bacteroides fragilis
CL05T12C13]
gi|423282802|ref|ZP_17261687.1| hypothetical protein HMPREF1204_01225 [Bacteroides fragilis HMW
615]
gi|60495075|emb|CAH09894.1| putative transmembrane rhomboid family protein [Bacteroides
fragilis NCTC 9343]
gi|251944655|gb|EES85130.1| hypothetical protein BSHG_3456 [Bacteroides sp. 3_2_5]
gi|263252657|gb|EEZ24169.1| rhomboid family protein [Bacteroides sp. 2_1_16]
gi|301165153|emb|CBW24723.1| putative transmembrane rhomboid family protein [Bacteroides
fragilis 638R]
gi|335941417|gb|EGN03274.1| hypothetical protein HMPREF1018_04103 [Bacteroides sp. 2_1_56FAA]
gi|387775908|gb|EIK38012.1| hypothetical protein HMPREF1055_03070 [Bacteroides fragilis
CL07T00C01]
gi|392649104|gb|EIY42787.1| hypothetical protein HMPREF1066_03871 [Bacteroides fragilis
CL03T00C08]
gi|392659202|gb|EIY52828.1| hypothetical protein HMPREF1067_00408 [Bacteroides fragilis
CL03T12C07]
gi|392696328|gb|EIY89524.1| hypothetical protein HMPREF1079_04024 [Bacteroides fragilis
CL05T00C42]
gi|392696999|gb|EIY90186.1| hypothetical protein HMPREF1056_04193 [Bacteroides fragilis
CL07T12C05]
gi|392699527|gb|EIY92703.1| hypothetical protein HMPREF1080_03618 [Bacteroides fragilis
CL05T12C13]
gi|404581673|gb|EKA86369.1| hypothetical protein HMPREF1204_01225 [Bacteroides fragilis HMW
615]
Length = 224
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 13/121 (10%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTIL-----NQRDYKRLVLSALEHGD 81
+P T LI+I LL++ +AQ S GI +S + L + + +L HG
Sbjct: 1 MPTVTKNLIIINVLLFLAQFVAQ---SYGINLSDYLGLHFFLADNFNPAQLFTYMFMHGG 57
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
H+++NM ++ + GR LE+++G +F+ + + + Y+ Y VTEL
Sbjct: 58 FTHIFFNMFAVWMFGRILEQVWGPKRFLFYYILCGVGAGLLQEGVQYIQY-----VTELS 112
Query: 142 Q 142
Q
Sbjct: 113 Q 113
>gi|381179391|ref|ZP_09888244.1| Rhomboid family protein [Treponema saccharophilum DSM 2985]
gi|380768686|gb|EIC02672.1| Rhomboid family protein [Treponema saccharophilum DSM 2985]
Length = 229
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 29/217 (13%)
Query: 31 TLTLILIQTLLYIM----NVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLY 86
TL++I I ++Y + N++ D I + + +Q ++ L + HG+ HL+
Sbjct: 21 TLSIIAINAVVYFLFNFTNLIPVGEDYFSINVVGF-VFHQCFWQPLTYMFM-HGNIQHLF 78
Query: 87 YNMVSLIVKGRELERMFGSVQFVVLVSFLII-------STSVCYVMLSYVIYLMNHDVTE 139
+NM+ L+ G ++ER GS +FV++ +L++ S V Y + +Y+I + T
Sbjct: 79 FNMLGLLFFGMQVERALGSKEFVMM--YLVVGVLSGLFSVGVYYALGAYMISQGMYPYTY 136
Query: 140 LYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMV-------- 191
L +G S ++ + P + + F +P V AP LVI + ++
Sbjct: 137 LVSL-VGASGAIYGILLAYAVIFPR-SRIFVWFVIP-VPAP--ILVIAYAVIEFVSQFTG 191
Query: 192 -PNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSR 227
N + + HL+G Y +G R R V R
Sbjct: 192 GSNVAHQTHLAGFAFAFLYMLVRMGVNPIRVWRDVFR 228
>gi|261886402|ref|ZP_06010441.1| rhomboid family protein [Campylobacter fetus subsp. venerealis str.
Azul-94]
Length = 172
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%)
Query: 34 LILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLI 93
LI I ++Y + S I + + + Y +L+ + HG MH+ NM L
Sbjct: 7 LIAINAVVYFLEYSVYNSRSFSIFFGLNELFFEGAYWQLITTMFLHGSLMHILMNMAVLY 66
Query: 94 VKGRELERMFGSVQFVVL 111
G LER GSV+F++L
Sbjct: 67 QFGMLLERYLGSVKFLLL 84
>gi|227496597|ref|ZP_03926875.1| rhomboid family protein [Actinomyces urogenitalis DSM 15434]
gi|226833877|gb|EEH66260.1| rhomboid family protein [Actinomyces urogenitalis DSM 15434]
Length = 282
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
R + +A HG MHL +NM +L V G LE + G +F L + + S +LS
Sbjct: 117 RFLSTAFLHGSLMHLAFNMWALWVCGSALEPLLGRWRFAALYALSALGGSTAIYLLS 173
>gi|452974258|gb|EME74079.1| transmembrane protein YdcA [Bacillus sonorensis L12]
Length = 199
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 29 PGTLTLILIQTLLYIMNVLAQP----WDSLGICISAHTILNQRDYKRLVLSALEHGDDMH 84
P T ++ +Q ++++ ++ P W L I + + + ++ RLV H H
Sbjct: 16 PATAAILALQLAIWVLFLIPLPAVQMWSDL--TIGFNWGIAEGEWWRLVTPVFIHAGFSH 73
Query: 85 LYYNMVSLIVKGRELERMFGSVQFV 109
L +N +SL + LERM G ++F+
Sbjct: 74 LLFNSMSLFLFAPALERMMGKLRFL 98
>gi|355716390|gb|AES05596.1| rhomboid domain containing 2 [Mustela putorius furo]
Length = 389
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 46 VLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
+L P G+ + + + N + Y RLV + + + L + + ER G+
Sbjct: 63 LLQPPLAPSGLSLRSEALRNWQVY-RLVTYIFVYENPVSLLCGAIVIWRFAGNFERTVGT 121
Query: 106 VQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-----AIGFSAVLFSMKTIRTR 160
V+ +V + + S +I+L V+ L + A GF+ V F+M + +
Sbjct: 122 VRHCFF--------TVIFAIFSAIIFLSFEAVSSLSKLGEVEDARGFTPVAFAMLGVNSV 173
Query: 161 QSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
+S + VP++ PW+ L+ ++P SF ++ G+ +GL Y
Sbjct: 174 RSRMRRALVFGVVVPSMLVPWL-LLCASWLIPQTSFLSNVCGLGIGLTY 221
>gi|189501441|ref|YP_001960911.1| rhomboid family protein [Chlorobium phaeobacteroides BS1]
gi|189496882|gb|ACE05430.1| Rhomboid family protein [Chlorobium phaeobacteroides BS1]
Length = 273
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 100/257 (38%), Gaps = 56/257 (21%)
Query: 23 GFHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICI----SAHTILNQRDYK----RLVL 74
GF ++PP T+IL ++++ LGI + + + +Y +L+
Sbjct: 12 GFQVMPPAIKTIILANIAVFLLQF-----SPLGIYLMYFGPLWPVASSGEYSFQLWQLIT 66
Query: 75 SALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMN 134
HG H+ +NM +L + G E+E +G+ +F VC + + L+N
Sbjct: 67 YMFMHGGFAHILFNMFALWLFGAEIENYWGTKEFTTYY-------FVCGIGAA----LLN 115
Query: 135 HDVTELYQCA-IGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP-------AVYAPWIELVI 186
T Q +G S +F + PD + L F P A YA IEL
Sbjct: 116 LLTTAGSQYPTVGASGAVFGILLAFGMMFPD-RYIYLYFLFPVKAKYFVAGYAG-IEL-- 171
Query: 187 IHLMVPNASFKG---------HLSGILVGLCYTETSLGRLVERSGRSVSRVVNTLTNVFK 237
LM N S G HL G+LVGL Y ++ + G S S V+ F
Sbjct: 172 --LMGINNSTMGSGSNIAHFAHLGGMLVGLVYIKS------RQQGWSFSEWVD---RTFP 220
Query: 238 LDDDCNGDDEDSDTSAS 254
++ +G A+
Sbjct: 221 KKEESSGPKLHKKEPAA 237
>gi|330470718|ref|YP_004408461.1| rhomboid family protein [Verrucosispora maris AB-18-032]
gi|328813689|gb|AEB47861.1| rhomboid family protein [Verrucosispora maris AB-18-032]
Length = 269
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 22/166 (13%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
+ + RLV + H +HL NM +L V G+ LE + G ++F L +V +
Sbjct: 102 EGQWYRLVTAMFLHYGILHLLLNMWALWVLGQSLEAVLGPLRFAALYFIAGFGGNVAVYV 161
Query: 126 LSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELV 185
S + T ++ F+A+ M+ + S + ++N +
Sbjct: 162 FSPPNQMSAGASTAIFGL---FAAIFVIMRRLGRDTSAILPILVIN-------------L 205
Query: 186 IIHLMVPNASFKGHLSGILVG------LCYTETSLGRLVERSGRSV 225
I VP S GHL G++ G L Y S LV+ G +V
Sbjct: 206 IFTFTVPQISIAGHLGGLVFGGLMALVLAYAPRSHRTLVQAVGGTV 251
>gi|118619868|ref|YP_908200.1| serine protease [Mycobacterium ulcerans Agy99]
gi|118571978|gb|ABL06729.1| rhomboid family serine protease [Mycobacterium ulcerans Agy99]
Length = 254
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 60/141 (42%), Gaps = 21/141 (14%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
RLV SA H +HL +NM +L V G LE G ++F L + + SV L Y+I
Sbjct: 78 RLVTSAFMHYGRLHLVFNMWALYVVGPPLEMWLGRLRFGGLYALSALGGSV----LVYLI 133
Query: 131 YLMNHDVTELYQCAIG-FSAVLFSMKT----IRTRQSPDVTHQLLNFSVPAVYAPWIELV 185
+N G F A K IR + + + F PAV + +L+
Sbjct: 134 APLNTATAGASGAIFGLFGATFVVAKRLNLDIRWVVALIAINLAITFVAPAVGS---QLI 190
Query: 186 IIHLMVPNASFKGHLSGILVG 206
S++GH+ G++ G
Sbjct: 191 ---------SWQGHVGGLITG 202
>gi|403509381|ref|YP_006641019.1| rhomboid family protein [Nocardiopsis alba ATCC BAA-2165]
gi|402803589|gb|AFR10999.1| rhomboid family protein [Nocardiopsis alba ATCC BAA-2165]
Length = 256
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 60 AHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIIST 119
++ ++ RL+ +A HG +HL +N ++ G +LER G +F+ L +S
Sbjct: 76 GQGVVWHGEWYRLITAAFLHGGVLHLLFNSYAMYALGPQLERWLGHGRFLALWFLGALSG 135
Query: 120 SV 121
SV
Sbjct: 136 SV 137
>gi|53715703|ref|YP_101695.1| hypothetical protein BF4423 [Bacteroides fragilis YCH46]
gi|52218568|dbj|BAD51161.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
Length = 224
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 13/121 (10%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTIL-----NQRDYKRLVLSALEHGD 81
+P T LI+I LL++ +AQ S GI +S + L + + +L HG
Sbjct: 1 MPTVTKNLIIINVLLFLAQFVAQ---SYGINLSDYLGLHFFLADNFNPAQLFTYMFMHGG 57
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
H+++NM ++ + GR LE+++G +F+ + + + Y+ Y VTEL
Sbjct: 58 FTHIFFNMFAVWMFGRILEQVWGPKRFLFYYILCGVGAGLLQEGVQYIQY-----VTELS 112
Query: 142 Q 142
Q
Sbjct: 113 Q 113
>gi|325916919|ref|ZP_08179164.1| uncharacterized membrane protein [Xanthomonas vesicatoria ATCC
35937]
gi|325536865|gb|EGD08616.1| uncharacterized membrane protein [Xanthomonas vesicatoria ATCC
35937]
Length = 255
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 33/58 (56%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
+L+ A HG HL++NM++L + G LE+ +G +F+ + +C +++++
Sbjct: 86 QLLTYAFLHGGFNHLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGLCQLLMAW 143
>gi|239825780|ref|YP_002948404.1| rhomboid family protein [Geobacillus sp. WCH70]
gi|239806073|gb|ACS23138.1| Rhomboid family protein [Geobacillus sp. WCH70]
Length = 205
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 25/166 (15%)
Query: 47 LAQP-WDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
+A+P W+ + I + + +Y RLV + H H+ N +SLI+ G LE+M G
Sbjct: 38 IAEPLWEKM---IGFNAAVQNGEYWRLVSPLVLHVRFEHMIINSISLILFGPALEKMLGK 94
Query: 106 VQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAV--LFSMK---TIRTR 160
+F++L I + +C + ++ + + +Y A A+ LF M + R
Sbjct: 95 SKFLLLY----IGSGICANIATFFV------LPAMYSHAGASGAIFGLFGMYGYLIVFCR 144
Query: 161 QSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
+ H L F+V + + I PN + HL G L G
Sbjct: 145 DIIETQHARLLFAVICIS------LFISFTAPNVNMVAHLFGFLGG 184
>gi|94971691|ref|YP_593739.1| rhomboid-like protein [Candidatus Koribacter versatilis Ellin345]
gi|94553741|gb|ABF43665.1| Rhomboid-like protein [Candidatus Koribacter versatilis Ellin345]
Length = 285
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 13/152 (8%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
LV + H MHL+ NM+ L + G ++E FG+ +F+ + ++ ++ V +SY
Sbjct: 64 ELVTYSFLHAGGMHLFGNMLGLWMFGSQIEGDFGTRRFLSFYFWCVVGGALTTVAVSYTG 123
Query: 131 YLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLM 190
L + + G +L + + Q ++ F V A Y I LV++ L
Sbjct: 124 ILGISPLLPTIGASAGVYGILIAFGVLHADQ--EIYMLPFPFKVKAKYLVGI-LVVVTLA 180
Query: 191 V----------PNASFKGHLSGILVGLCYTET 212
+ ++ HL G++ G Y +
Sbjct: 181 FALSESNGTSGASIAYAAHLGGLIFGYIYIKA 212
>gi|50288543|ref|XP_446701.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526009|emb|CAG59628.1| unnamed protein product [Candida glabrata]
Length = 341
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 38/245 (15%)
Query: 10 LGILLLLYQVLSVGFHLIPPGT--------LTLILIQT--LLYIMNVLAQPWDSLGICIS 59
+G + ++Y + F+++PP T L ++ T L++ M + Q W L
Sbjct: 110 VGAMAVIYFISPYLFNIVPPFTYFKHNPKDLVYAILGTNLLVFGMWRIPQCWRFL----- 164
Query: 60 AHTILNQRDY----KRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFL 115
+L Q+D+ +V SA H + HL NM++L G L + G+ F L
Sbjct: 165 QKYMLLQKDHMASKWAIVGSAFSHQEFWHLGMNMLALWSFGTSLASILGTANFFSLYMNS 224
Query: 116 IISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP 175
I+ S+ + + LM + ++G S LF + P L F +P
Sbjct: 225 AIAGSLFSLWYPRIAKLM------MIGPSLGASGALFGVFGSFAYLFPQAKILLFVFPIP 278
Query: 176 AVYAPWI--------ELVIIHLMVPNASFKGHLSGILVGLCYT---ETSLGRLVERSGRS 224
W+ L L + + HL G L+G+ Y T + + ER +S
Sbjct: 279 G--GAWVAFLGSVAWNLAGCVLRWGSFDYAAHLGGSLMGIAYGWYISTLMKKRRERRIKS 336
Query: 225 VSRVV 229
VS+ V
Sbjct: 337 VSKWV 341
>gi|415717032|ref|ZP_11466719.1| rhomboid family membrane protein [Gardnerella vaginalis 1500E]
gi|388061532|gb|EIK84188.1| rhomboid family membrane protein [Gardnerella vaginalis 1500E]
Length = 236
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 75 SALEHGDDM-HLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIY-- 131
S H ++ H+++NM+ L G ELER FG +F L +LI C ++ +I+
Sbjct: 70 SMFVHAPNLTHIFFNMLCLWSLGAELERYFGRWKFFGL--YLISGLGGC---IADIIWCR 124
Query: 132 LMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVI-IHLM 190
++N+ + Y + ++ ++ + R ++ ++ WI + + + ++
Sbjct: 125 IINNWQSASYGASGAIMGLIGALLVAQWRLGENMRGTII----------WIAITLAMPII 174
Query: 191 VPNASFKGHLSGILVG 206
+PN +++ H+ G+++G
Sbjct: 175 IPNIAWQAHVGGLIIG 190
>gi|325927371|ref|ZP_08188621.1| uncharacterized membrane protein [Xanthomonas perforans 91-118]
gi|325542259|gb|EGD13751.1| uncharacterized membrane protein [Xanthomonas perforans 91-118]
Length = 253
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 33/58 (56%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
+L+ A HG HL++NM++L + G LE+ +G +F+ + +C +++++
Sbjct: 86 QLLTYAFLHGGFNHLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGLCQLLMAW 143
>gi|294625501|ref|ZP_06704129.1| integral membrane protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294664007|ref|ZP_06729420.1| integral membrane protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292600170|gb|EFF44279.1| integral membrane protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292606221|gb|EFF49459.1| integral membrane protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 253
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 33/58 (56%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
+L+ A HG HL++NM++L + G LE+ +G +F+ + +C +++++
Sbjct: 86 QLLTYAFLHGGFNHLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGLCQLLMAW 143
>gi|148544432|ref|YP_001271802.1| rhomboid family protein [Lactobacillus reuteri DSM 20016]
gi|184153796|ref|YP_001842137.1| hypothetical protein LAR_1141 [Lactobacillus reuteri JCM 1112]
gi|227363140|ref|ZP_03847275.1| S54 family peptidase [Lactobacillus reuteri MM2-3]
gi|325682754|ref|ZP_08162270.1| S54 family peptidase [Lactobacillus reuteri MM4-1A]
gi|148531466|gb|ABQ83465.1| Rhomboid family protein [Lactobacillus reuteri DSM 20016]
gi|183225140|dbj|BAG25657.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
gi|227071858|gb|EEI10146.1| S54 family peptidase [Lactobacillus reuteri MM2-3]
gi|324977104|gb|EGC14055.1| S54 family peptidase [Lactobacillus reuteri MM4-1A]
Length = 219
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDS----LGICISAHTILNQRDYKRLVLSALEHGDD 82
+ P TLTLI+ Q L+Y V A + L + + ++ + ++ RLV H
Sbjct: 8 LAPVTLTLIIFQVLVYCWLVYAGGSTNTVTLLNMGARSTPLIREGEWWRLVSPVFLHVGL 67
Query: 83 MHLYYNMVSLIVKGRELERMFGSVQFVVL 111
HL N V+L+ GR +E FG + VV+
Sbjct: 68 SHLVVNSVTLLYIGRYIEEFFGHWRMVVI 96
>gi|21243475|ref|NP_643057.1| hypothetical protein XAC2748 [Xanthomonas axonopodis pv. citri str.
306]
gi|21109033|gb|AAM37593.1| integral membrane protein [Xanthomonas axonopodis pv. citri str.
306]
Length = 253
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 33/58 (56%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
+L+ A HG HL++NM++L + G LE+ +G +F+ + +C +++++
Sbjct: 86 QLLTYAFLHGGFNHLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGLCQLLMAW 143
>gi|357112157|ref|XP_003557876.1| PREDICTED: transmembrane protein 115-like [Brachypodium distachyon]
Length = 320
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 88 NMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGF 147
++V L++ G+ LE ++G+ + + + + ISTS+C + + ++Y LY GF
Sbjct: 87 SIVGLLLFGKLLEPLWGAKELLKFIFIVNISTSMCVFVTAIILYYTTQQEIYLYTPLSGF 146
Query: 148 SAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASF----KGHLSGI 203
VL + PD Q LN V + A WI ++ + V + F +L +
Sbjct: 147 CGVLSGFLVGIKQILPD---QELNILVLKIKAKWIPSLVAFISVSVSFFLKESMSYLPIL 203
Query: 204 LVGLC 208
L G C
Sbjct: 204 LFGTC 208
>gi|383821590|ref|ZP_09976832.1| hypothetical protein MPHLEI_19664 [Mycobacterium phlei RIVM601174]
gi|383332932|gb|EID11395.1| hypothetical protein MPHLEI_19664 [Mycobacterium phlei RIVM601174]
Length = 248
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYY 87
P T TLI + L++++ + P + + + + + ++ RL+ SA H H+ +
Sbjct: 36 PTVTYTLIAVNVLVFLLQAV-LPGFTREFVLQPYAVADG-EFYRLLTSAFLHYGLTHILF 93
Query: 88 NMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
NM +L V G LE G ++FV L + + SV +LS
Sbjct: 94 NMWALYVVGPALEAALGRLRFVGLYALSALGGSVLVYLLS 133
>gi|384099561|ref|ZP_10000647.1| putative transmembrane rhomboid family protein [Imtechella
halotolerans K1]
gi|383832909|gb|EID72379.1| putative transmembrane rhomboid family protein [Imtechella
halotolerans K1]
Length = 288
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 19/174 (10%)
Query: 72 LVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIY 131
L+ A HG MH+++NM+ L GR +F +F+ V FL + +LSY ++
Sbjct: 65 LLTYAFFHGGLMHIFWNMLLLYFAGRMFLNLFDGRRFLN-VYFLGALAGGFFFLLSYNLF 123
Query: 132 LMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLM- 190
+ V IG SA + ++ +P Q F ++ + LV+ L+
Sbjct: 124 PVFVGVNS---VLIGASAAVMAVLIFMCTYTPYQELQFFFFRF-KLWHLGVFLVLWDLLQ 179
Query: 191 VPNASFKG---HLSGILVGLCYTETSLGRLVERSGRSV----SRVVNTLTNVFK 237
+P ++ G HL G L G Y + L +G + S V++ +TN+FK
Sbjct: 180 LPMSNPGGRIAHLGGALWGFIYAKQLL------AGNDIAAWFSNVMDWITNLFK 227
>gi|379706281|ref|YP_005261486.1| putative membrane-bound rhomboid protease [Nocardia cyriacigeorgica
GUH-2]
gi|374843780|emb|CCF60842.1| putative membrane-bound rhomboid protease [Nocardia cyriacigeorgica
GUH-2]
Length = 247
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 60/148 (40%), Gaps = 27/148 (18%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQF--VVLVSFLIISTSVCYVM 125
D+ R++ S H +HL NM +L V GR++E + G ++ V LVS L S +V
Sbjct: 76 DWVRVIGSGFLHYGPIHLLLNMFALYVVGRDIELVLGRSRYLAVYLVSLLGGSAAV---- 131
Query: 126 LSYVIYLMNHDVTELYQCAIGFSAVLFSMKT---IRTRQSPDVTHQLLNFSVPAVYAPWI 182
M L A G LF T IR RQ + T+ + +
Sbjct: 132 -------MVFSQDSLTAGASGAVYGLFGAITVILIRLRQ--NATNMFIIIGIN------- 175
Query: 183 ELVIIHLMVPNASFKGHLSGILVGLCYT 210
V I +P S GHL G+ G T
Sbjct: 176 --VFISFSLPGISLFGHLGGLAAGTLAT 201
>gi|116490957|ref|YP_810501.1| membrane-associated serine protease [Oenococcus oeni PSU-1]
gi|290890431|ref|ZP_06553506.1| hypothetical protein AWRIB429_0896 [Oenococcus oeni AWRIB429]
gi|419859592|ref|ZP_14382246.1| membrane-associated serine protease [Oenococcus oeni DSM 20252 =
AWRIB129]
gi|116091682|gb|ABJ56836.1| Membrane-associated serine protease [Oenococcus oeni PSU-1]
gi|290479827|gb|EFD88476.1| hypothetical protein AWRIB429_0896 [Oenococcus oeni AWRIB429]
gi|410496609|gb|EKP88092.1| membrane-associated serine protease [Oenococcus oeni DSM 20252 =
AWRIB129]
Length = 236
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 37/180 (20%)
Query: 26 LIPPGTLTLILIQTLLYIMNVL--AQPWDSLGICISAHTILN------------------ 65
IPP TL++ I +Y V A + S G+ + +N
Sbjct: 3 FIPPVTLSIFSITVFIYFFQVFFDAYLFHSFGLFSLINRFINGPSIQSLILLGGQVSSLI 62
Query: 66 -QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYV 124
+ + RL H MH++ NM +LI+ G +E++FG +++ LI S +
Sbjct: 63 LKGQWYRLFTPIFLHSSLMHIFSNMFTLIIFGPFVEKLFGKTKYL-----LIYLLSGLWG 117
Query: 125 MLSYVIYLMNHDVTELYQCAIGFSAVLF----SMKTIR--TRQSPDVTHQLLNFSVPAVY 178
L +I+ N ++ ++G S LF +M +I R +P QL+ F+ A++
Sbjct: 118 NLLTLIFDPNPNIV-----SVGASGALFGLFGAMISIAWFNRNNPIFKRQLVVFAALALF 172
>gi|415721270|ref|ZP_11468477.1| rhomboid family membrane protein [Gardnerella vaginalis 00703Bmash]
gi|388061058|gb|EIK83727.1| rhomboid family membrane protein [Gardnerella vaginalis 00703Bmash]
Length = 233
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 15/135 (11%)
Query: 75 SALEHGDDM-HLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLM 133
S H ++ H+ +NM+ L G ELER FG +F L + I C L Y L
Sbjct: 70 SMFVHAPELTHILFNMICLYSLGVELERFFGKWKFFFL--YAISGLGGCVATLLYS-KLT 126
Query: 134 NHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVI-IHLMVP 192
V Y + ++ ++ + R V L+ WI L + + L+V
Sbjct: 127 QDWVIAAYGASGAIMGLIGALLVAQWRLGESVNGTLI----------WIGLTLAMPLLVQ 176
Query: 193 NASFKGHLSGILVGL 207
N +++ H+ GI+ G+
Sbjct: 177 NIAWQAHIGGIVTGI 191
>gi|345007980|ref|YP_004810334.1| rhomboid family protein [Streptomyces violaceusniger Tu 4113]
gi|344034329|gb|AEM80054.1| Rhomboid family protein [Streptomyces violaceusniger Tu 4113]
Length = 294
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 24/145 (16%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
+ + RLV S H +H+ +NM+SL G LE G V+F+VL + S
Sbjct: 127 EGQWWRLVTSIFLHQQLIHIAFNMLSLWWIGGPLEAALGRVRFIVLYILSGLGGSA---- 182
Query: 126 LSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELV 185
LSY++ N Q ++G S +F + + V + LN+ + P I L+
Sbjct: 183 LSYLLAAQN-------QPSLGASGAIFGLLG-----ATAVLMRRLNYDM----RPVIALL 226
Query: 186 IIHLMV----PNASFKGHLSGILVG 206
++L+ +++ H+ G++ G
Sbjct: 227 ALNLLFTFTWSGIAWQAHVGGLVAG 251
>gi|219849715|ref|YP_002464148.1| rhomboid family protein [Chloroflexus aggregans DSM 9485]
gi|219543974|gb|ACL25712.1| Rhomboid family protein [Chloroflexus aggregans DSM 9485]
Length = 271
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 58/106 (54%), Gaps = 11/106 (10%)
Query: 31 TLTLILIQTLLYIMN-VLA----QPWDSLGICISAHTILNQR----DYKRLVLSALEHGD 81
T +L+ I ++Y+++ VL+ QP +L + + +N+R + RL+ + + H +
Sbjct: 47 TYSLLWIIGIVYLLSCVLSGSFFQP--TLSVLVVLGAKVNERIAAGEVWRLLTATVLHAN 104
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
+H+++N +L V G E ER +G V+F+VL + S+ LS
Sbjct: 105 LIHIFFNGYALSVLGPETERFYGHVRFLVLYLLSGVGGSIASYALS 150
>gi|419710435|ref|ZP_14237901.1| rhomboid family protein [Mycobacterium abscessus M93]
gi|382941267|gb|EIC65587.1| rhomboid family protein [Mycobacterium abscessus M93]
Length = 247
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 25/146 (17%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
+ + R V + H MH+ NM+SL + G LER FG ++ + ++ +S +
Sbjct: 71 EGELWRTVTTGFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAAMW 130
Query: 126 LS--YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPD--VTHQLLNFSVPAVYAPW 181
LS V+ + + L A+ S +R R +P + LLN
Sbjct: 131 LSPNAVVAGASGAIYGLLGAALVLS--------LRERLNPQTIIIVLLLNIG-------- 174
Query: 182 IELVIIHLMVPNASFKGHLSGILVGL 207
+ + +P S GH+ G+L G+
Sbjct: 175 -----LSISLPGISLAGHMGGLLFGV 195
>gi|336176302|ref|YP_004581677.1| rhomboid family protein [Frankia symbiont of Datisca glomerata]
gi|334857282|gb|AEH07756.1| Rhomboid family protein [Frankia symbiont of Datisca glomerata]
Length = 377
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 16/145 (11%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
I +Y RL+ +A H +H+ +NM +L + G +LE++ G +++ L I +
Sbjct: 200 IAANDEYYRLLTAAFLHAGVLHILFNMYALYLLGSQLEQILGRARYLALFVVCAIGGNT- 258
Query: 123 YVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWI 182
LSY+I N GF A + I R D + L+ +
Sbjct: 259 ---LSYLINGWNTFSVGASTAVFGFFAAYY---VIARRLRADTSAILIIVGI-------- 304
Query: 183 ELVIIHLMVPNASFKGHLSGILVGL 207
+II + GH+ G++ GL
Sbjct: 305 -NLIITFTIARIDKWGHIGGLVAGL 328
>gi|226507044|ref|NP_001140408.1| hypothetical protein [Zea mays]
gi|194699368|gb|ACF83768.1| unknown [Zea mays]
gi|413955675|gb|AFW88324.1| hypothetical protein ZEAMMB73_179598 [Zea mays]
Length = 324
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 88 NMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGF 147
++V L++ G+ LE ++G+ + + + + +S S C + V+Y + + + LY GF
Sbjct: 77 SIVGLLLFGKVLEPLWGAKELLKFIFIVNLSISACVFVTMIVLYYITQEESYLYTPVSGF 136
Query: 148 SAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMV 191
VL + + PD Q LN V + A WI ++ + V
Sbjct: 137 YGVLSGLLVGIKQILPD---QELNLFVFKISAKWIPSIVAFISV 177
>gi|168214465|ref|ZP_02640090.1| rhomboid family protein [Clostridium perfringens CPE str. F4969]
gi|168216839|ref|ZP_02642464.1| rhomboid family protein [Clostridium perfringens NCTC 8239]
gi|422346116|ref|ZP_16427030.1| hypothetical protein HMPREF9476_01103 [Clostridium perfringens
WAL-14572]
gi|170714094|gb|EDT26276.1| rhomboid family protein [Clostridium perfringens CPE str. F4969]
gi|182381088|gb|EDT78567.1| rhomboid family protein [Clostridium perfringens NCTC 8239]
gi|373226738|gb|EHP49060.1| hypothetical protein HMPREF9476_01103 [Clostridium perfringens
WAL-14572]
Length = 342
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL 111
+ I+ +Y RLV S HG +HL +NM +L + G +ER++G+ +++ +
Sbjct: 195 NAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAI 245
>gi|440748391|ref|ZP_20927644.1| Rhomboid family protein [Mariniradius saccharolyticus AK6]
gi|436483215|gb|ELP39283.1| Rhomboid family protein [Mariniradius saccharolyticus AK6]
Length = 517
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 12/87 (13%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
D+ RLV S HG MHL+ N+ L++ +E +FG +++ +L ++ +C + S
Sbjct: 363 DWWRLVSSMFLHGGIMHLFLNIYGLVIAALFVEPVFGRIKYFILY----FASGICGSLAS 418
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSM 154
IY + ++ +G S +F +
Sbjct: 419 --IYWYENTIS------VGASGAIFGL 437
>gi|124027302|ref|YP_001012622.1| uncharacterized membrane protein [Hyperthermus butylicus DSM 5456]
gi|123977996|gb|ABM80277.1| uncharacterized membrane protein [Hyperthermus butylicus DSM 5456]
Length = 477
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 53/113 (46%), Gaps = 12/113 (10%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQP---WDS-------LGICISAHTILNQRDYKRLVLSAL 77
P T +I I L+Y+ V + P W + LG +A ++ R++ +
Sbjct: 34 PLATYAIIAINVLVYL--VTSAPTGFWQTTDEWVSRLGFVPAALLATPPSEFPRILTAMF 91
Query: 78 EHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
H + +H+++NM L + GR +E+ G +++ L I +V + + YV+
Sbjct: 92 THANLIHIFFNMYFLYLFGRAVEKTLGHWRYLALYLVSGIVAAVFHTVFMYVV 144
>gi|110799144|ref|YP_696141.1| rhomboid family protein [Clostridium perfringens ATCC 13124]
gi|168206356|ref|ZP_02632361.1| rhomboid family protein [Clostridium perfringens E str. JGS1987]
gi|169347261|ref|ZP_02866200.1| rhomboid family protein [Clostridium perfringens C str. JGS1495]
gi|110673791|gb|ABG82778.1| rhomboid family protein [Clostridium perfringens ATCC 13124]
gi|169296657|gb|EDS78788.1| rhomboid family protein [Clostridium perfringens C str. JGS1495]
gi|170662212|gb|EDT14895.1| rhomboid family protein [Clostridium perfringens E str. JGS1987]
Length = 342
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL 111
+ I+ +Y RLV S HG +HL +NM +L + G +ER++G+ +++ +
Sbjct: 195 NAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAI 245
>gi|18310434|ref|NP_562368.1| rhomboid family protein [Clostridium perfringens str. 13]
gi|18145114|dbj|BAB81158.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 342
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL 111
+ I+ +Y RLV S HG +HL +NM +L + G +ER++G+ +++ +
Sbjct: 195 NAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAI 245
>gi|412988740|emb|CCO15331.1| Rhomboid family protein [Bathycoccus prasinos]
Length = 249
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC-YVML 126
Y RL+ SA HG +HL+ NM S+ G +ER+FG + +S ++ Y M
Sbjct: 112 QYYRLLTSAFLHGGLVHLFVNMYSVNAIGSAVERIFGKTHTYAAFTLSALSGNIASYKMS 171
Query: 127 SY 128
Y
Sbjct: 172 KY 173
>gi|377574619|ref|ZP_09803641.1| rhomboid family protein [Mobilicoccus pelagius NBRC 104925]
gi|377536616|dbj|GAB48806.1| rhomboid family protein [Mobilicoccus pelagius NBRC 104925]
Length = 354
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 11/119 (9%)
Query: 71 RLVLSALEHGDDM--HLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSV-CYVMLS 127
R + +A H D HL +NM+SL G+ LE G ++ L + SV C ++
Sbjct: 165 RFLTAAFLHSPDSISHLLFNMMSLYAMGQFLEPALGRARYTALYLLSALGGSVGCLLLAP 224
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKT----IRTRQSPDVTHQL----LNFSVPAVY 178
++ + V +Q +G S +F + T + R VT + +N ++P VY
Sbjct: 225 HLDAVDQASVMAWFQGMVGASGAVFGLFTAAFLVLRRSGASVTGMVVLLAINAALPLVY 283
>gi|302669450|ref|YP_003829410.1| peptidase [Butyrivibrio proteoclasticus B316]
gi|302393923|gb|ADL32828.1| membrane-associated peptidase rhomboid family [Butyrivibrio
proteoclasticus B316]
Length = 216
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 31 TLTLILIQTLLYIMNVLAQPW-DSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNM 89
T+ L++I +++++ + P+ ++G+ + ++L +Y RLV + H D HL+ NM
Sbjct: 26 TIALVIINAVIFVLGSMFFPFIYTIGVMYTP-SVLQDGEYHRLVTAMFLHQDINHLFNNM 84
Query: 90 VSLIVKGRELERMFGSVQFVVL 111
+ L++ G +E G V + ++
Sbjct: 85 MILLLVGAIIENYLGHVAYGIM 106
>gi|443670730|ref|ZP_21135859.1| Rhomboid family protein [Rhodococcus sp. AW25M09]
gi|443416665|emb|CCQ14196.1| Rhomboid family protein [Rhodococcus sp. AW25M09]
Length = 251
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 16/160 (10%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
D RL+ S H +HL NM +L + GR++E + G +++ + ++ S ++L
Sbjct: 72 DLFRLIGSGFVHIGPIHLLVNMFALYLIGRDVELILGRSRYLAVYFLSLLGGSASVMVLE 131
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVII 187
+ ++ +G AV+ +R ++SP ++ + + I
Sbjct: 132 NPLAATAGASGAVFGL-LGAQAVIL----LRLKRSPAPVLIIIALN-----------IFI 175
Query: 188 HLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSR 227
+ +P+ S GH+ G++ G T + RSG SR
Sbjct: 176 SVSIPSISLWGHMGGLVAGAAVTAGLVFLPNRRSGPEQSR 215
>gi|183980331|ref|YP_001848622.1| serine protease [Mycobacterium marinum M]
gi|183173657|gb|ACC38767.1| rhomboid family serine protease [Mycobacterium marinum M]
Length = 289
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 21/141 (14%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
RLV SA H +HL +NM +L + G LE G ++F L + + SV L Y+I
Sbjct: 113 RLVTSAFMHYGTLHLVFNMWALYIVGPPLEMWLGRLRFGGLYALSALGGSV----LVYLI 168
Query: 131 YLMNHDVTELYQCAIG-FSAVLFSMKT----IRTRQSPDVTHQLLNFSVPAVYAPWIELV 185
+N G F A K IR + + + F PAV + +L+
Sbjct: 169 APLNTATAGASGAIFGLFGATFVVAKRLNLDIRWVVALIAINLAITFVAPAVGS---QLI 225
Query: 186 IIHLMVPNASFKGHLSGILVG 206
S++GH+ G++ G
Sbjct: 226 ---------SWQGHVGGLITG 237
>gi|168210042|ref|ZP_02635667.1| rhomboid family protein [Clostridium perfringens B str. ATCC 3626]
gi|170711841|gb|EDT24023.1| rhomboid family protein [Clostridium perfringens B str. ATCC 3626]
Length = 342
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL 111
+ I+ +Y RLV S HG +HL +NM +L + G +ER++G+ +++ +
Sbjct: 195 NAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAI 245
>gi|422874373|ref|ZP_16920858.1| rhomboid family protein [Clostridium perfringens F262]
gi|380304681|gb|EIA16968.1| rhomboid family protein [Clostridium perfringens F262]
Length = 342
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL 111
+ I+ +Y RLV S HG +HL +NM +L + G +ER++G+ +++ +
Sbjct: 195 NAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAI 245
>gi|335307357|ref|XP_003124448.2| PREDICTED: rhomboid domain-containing protein 2-like [Sus scrofa]
Length = 460
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 21/137 (15%)
Query: 85 LYYNMVSLIVKG-------RELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDV 137
+Y N VSL+ ER G+V+ +V + + S +I+L V
Sbjct: 173 VYENPVSLLCGAIIIWRFAGNFERTVGTVRHCFF--------TVIFALCSAIIFLSFEAV 224
Query: 138 TELYQC-----AIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVP 192
++L + A GF+ V F+M + + ++ + VP++ PW+ L+ ++P
Sbjct: 225 SKLSKLGEVEDARGFTPVAFAMLGVNSVRARMRRALVFGMVVPSMLVPWL-LLCASWLIP 283
Query: 193 NASFKGHLSGILVGLCY 209
SF ++ G+ +GL Y
Sbjct: 284 QTSFLSNVCGLGIGLAY 300
>gi|381171870|ref|ZP_09881009.1| rhomboid family protein [Xanthomonas citri pv. mangiferaeindicae
LMG 941]
gi|390993222|ref|ZP_10263409.1| rhomboid family protein [Xanthomonas axonopodis pv. punicae str.
LMG 859]
gi|418516431|ref|ZP_13082605.1| hypothetical protein MOU_06431 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|418519737|ref|ZP_13085789.1| hypothetical protein WS7_01710 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|372552048|emb|CCF70384.1| rhomboid family protein [Xanthomonas axonopodis pv. punicae str.
LMG 859]
gi|380687699|emb|CCG37496.1| rhomboid family protein [Xanthomonas citri pv. mangiferaeindicae
LMG 941]
gi|410705181|gb|EKQ63660.1| hypothetical protein WS7_01710 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410706970|gb|EKQ65426.1| hypothetical protein MOU_06431 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 231
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 33/58 (56%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
+L+ A HG HL++NM++L + G LE+ +G +F+ + +C +++++
Sbjct: 64 QLLTYAFLHGGFNHLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGLCQLLMAW 121
>gi|346725572|ref|YP_004852241.1| integral membrane protein [Xanthomonas axonopodis pv. citrumelo F1]
gi|346650319|gb|AEO42943.1| integral membrane protein [Xanthomonas axonopodis pv. citrumelo F1]
Length = 231
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 33/58 (56%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
+L+ A HG HL++NM++L + G LE+ +G +F+ + +C +++++
Sbjct: 64 QLLTYAFLHGGFNHLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGLCQLLMAW 121
>gi|386812611|ref|ZP_10099836.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386404881|dbj|GAB62717.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 291
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 17/139 (12%)
Query: 80 GDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTE 139
+ HL +NM+ L + G E+ER+ GS +F+ L I +C + +
Sbjct: 101 ANPWHLIFNMLVLWMFGSEVERVLGSRRFLTLYFTAGIFAGICNCIFT------------ 148
Query: 140 LYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWI--ELVIIHLMVP---NA 194
+ +G S +F+++ P+ T F + A Y I + I + ++P N
Sbjct: 149 PWASMVGASGAIFAIEIAFAMYFPNSTVIFYFFPIKAKYLVMIFTSITIFNCILPRNNNI 208
Query: 195 SFKGHLSGILVGLCYTETS 213
+ HL G++ G + + S
Sbjct: 209 AHFAHLGGLVYGFLFVQYS 227
>gi|443488760|ref|YP_007366907.1| rhomboid family serine protease [Mycobacterium liflandii 128FXT]
gi|442581257|gb|AGC60400.1| rhomboid family serine protease [Mycobacterium liflandii 128FXT]
Length = 254
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 21/141 (14%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
RLV SA H +HL +NM +L + G LE G ++F L + + SV L Y+I
Sbjct: 78 RLVTSAFMHYGTLHLVFNMWALYIVGPPLEMWLGRLRFGGLYALSALGGSV----LVYLI 133
Query: 131 YLMNHDVTELYQCAIG-FSAVLFSMKT----IRTRQSPDVTHQLLNFSVPAVYAPWIELV 185
+N G F A K IR + + + F PAV + +L+
Sbjct: 134 APLNTATAGASGAIFGLFGATFVVAKRLNLDIRWVVALIAINLAITFVAPAVGS---QLI 190
Query: 186 IIHLMVPNASFKGHLSGILVG 206
S++GH+ G++ G
Sbjct: 191 ---------SWQGHVGGLITG 202
>gi|315427037|dbj|BAJ48654.1| rhomboid family protein [Candidatus Caldiarchaeum subterraneum]
gi|343485705|dbj|BAJ51359.1| rhomboid family protein [Candidatus Caldiarchaeum subterraneum]
Length = 227
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
ILN ++ L+ H D +H++ NM +L + GR++E GS F+V V FL +
Sbjct: 51 ILNGQNLLSLISYMFIHVDFLHIFLNMYALFLFGRDVEERLGSALFLV-VYFLSGVVAAV 109
Query: 123 YVMLSYVIYL 132
+ M+ Y +++
Sbjct: 110 FHMIYYAVFM 119
>gi|78048457|ref|YP_364632.1| rhomboid family membrane protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78036887|emb|CAJ24580.1| Rhomboid family membrane protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 231
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 33/58 (56%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
+L+ A HG HL++NM++L + G LE+ +G +F+ + +C +++++
Sbjct: 64 QLLTYAFLHGGFNHLFFNMLALFMFGAPLEQTWGQKRFLTYYLVCVAGAGLCQLLMAW 121
>gi|296111906|ref|YP_003622288.1| small hydrophobic molecule transporter protein [Leuconostoc kimchii
IMSNU 11154]
gi|339490819|ref|YP_004705324.1| small hydrophobic molecule transporter protein [Leuconostoc sp. C2]
gi|295833438|gb|ADG41319.1| small hydrophobic molecule transporter protein, putative
[Leuconostoc kimchii IMSNU 11154]
gi|338852491|gb|AEJ30701.1| small hydrophobic molecule transporter protein, putative
[Leuconostoc sp. C2]
Length = 229
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 46 VLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
VL W G I H DY RLV H MH++ NM++L G +E FGS
Sbjct: 45 VLGAKW---GPYIKLH-----HDYWRLVTPLFLHAGFMHVFTNMLTLWFIGPLVESSFGS 96
Query: 106 VQFVVLVSF 114
+F++L F
Sbjct: 97 RKFLILYLF 105
>gi|342885334|gb|EGU85375.1| hypothetical protein FOXB_04086 [Fusarium oxysporum Fo5176]
Length = 267
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 10/139 (7%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIIS-TSVCYVMLSYV 129
RL L H + +H N+ +L E G++ + L + S +V YV++
Sbjct: 63 RLSTFPLIHLNIIHAILNLAALTPLMERFENEHGTLTSLALFFGPLTSIPAVMYVLIERY 122
Query: 130 IYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLL--NFSVPAVYAPWIELVII 187
++ +NH V +G S +F++ + + Q+ + +P P I +++
Sbjct: 123 VFHVNHGV-------LGASMWVFTLLAMESIQTYKTNPHFVVGTVHIPTWTTPLIMCMVV 175
Query: 188 HLMVPNASFKGHLSGILVG 206
+VP S GHL GI +G
Sbjct: 176 RALVPGTSLLGHLCGIAIG 194
>gi|392969387|ref|ZP_10334802.1| Rhomboid family protein [Fibrisoma limi BUZ 3]
gi|387841581|emb|CCH56860.1| Rhomboid family protein [Fibrisoma limi BUZ 3]
Length = 206
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Query: 58 ISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSV----QFVVLVS 113
++ + I + Y RL+ S H D HL++NM+SL G +E +FG++ + L+
Sbjct: 30 MNPYQISRRGQYYRLLTSGFLHADWGHLFFNMLSLYFFGGFVEMVFGALFPGSGAIYLIG 89
Query: 114 FLIISTSVCYVMLSYVIYLMNHDVTELYQ---CAIGFSAVLFSMKTIRT 159
F +I +++S + + H Y + G SA++F+ R
Sbjct: 90 FYLIG-----ILVSDIPSFLKHRYDPGYNSLGASGGVSAIIFAGIMFRP 133
>gi|117927224|ref|YP_871775.1| rhomboid family protein [Acidothermus cellulolyticus 11B]
gi|117647687|gb|ABK51789.1| Rhomboid family protein [Acidothermus cellulolyticus 11B]
Length = 287
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 26/144 (18%)
Query: 68 DYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
++ RL+ + H +H+ +NM +L+V G LE + G ++F+VL + S
Sbjct: 122 EFYRLITAMFLHASVLHIVFNMWALLVVGAPLEALLGRLRFLVLYFLAGLGGST------ 175
Query: 128 YVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVII 187
+YL + +G S +F + + V + LNF + I LVI+
Sbjct: 176 -AVYLFAPRGSA----TLGASGAIFGLFA-----ALFVFGRRLNFDIRP-----IGLVIV 220
Query: 188 -----HLMVPNASFKGHLSGILVG 206
++ S++GH+ G+L G
Sbjct: 221 INLALTFVLSGVSWQGHIGGLLSG 244
>gi|32472115|ref|NP_865109.1| glpG protein [Rhodopirellula baltica SH 1]
gi|32397487|emb|CAD72793.1| probable glpG protein [Rhodopirellula baltica SH 1]
Length = 340
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
+ + + RLV A HG MHL +NM++L G +ER+ GS
Sbjct: 195 IKKGEIWRLVTPAFLHGSTMHLVFNMMALFTLGSVVERLHGS 236
>gi|182627147|ref|ZP_02954861.1| rhomboid family protein [Clostridium perfringens D str. JGS1721]
gi|177907465|gb|EDT70134.1| rhomboid family protein [Clostridium perfringens D str. JGS1721]
Length = 342
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL 111
+ I+ +Y RLV S HG +HL +NM +L + G +ER++G+ +++ +
Sbjct: 195 NAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAI 245
>gi|365832927|ref|ZP_09374453.1| hypothetical protein HMPREF1021_03217 [Coprobacillus sp. 3_3_56FAA]
gi|365259760|gb|EHM89743.1| hypothetical protein HMPREF1021_03217 [Coprobacillus sp. 3_3_56FAA]
Length = 214
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 70/151 (46%), Gaps = 13/151 (8%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
+L Y RL+ + H MH++ N SL+ G +E + G ++++ ++I++++
Sbjct: 49 VLAGNQYWRLISANFIHFGIMHIFCNCYSLVNLGSVMEYLLGMKRYLI----ILIASALA 104
Query: 123 YVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKT---IRTRQSPDVTHQLLNFSVPAVYA 179
+L V Y++ + G S +F + + DV L +V
Sbjct: 105 TTILPTVFYILTGNGAS--SIMGGISGAIFGLMGALLALAWKFKDVYAYLFKQISSSV-- 160
Query: 180 PWIELVIIHLMVPNASFKGHLSGILVGLCYT 210
+ +++I ++VP+ S GH+SG++ G T
Sbjct: 161 --LLMLLISILVPSISLSGHISGMIGGFIAT 189
>gi|350630141|gb|EHA18514.1| hypothetical protein ASPNIDRAFT_52561 [Aspergillus niger ATCC 1015]
Length = 899
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 150 VLFSMKTIRT-RQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVG 206
+L + IRT + +P + L + +P +P ++ ++VPN SF GHL ILVG
Sbjct: 143 LLLGSEAIRTFKSNPYFSFSLGSTKIPTWTSPLFACALVSILVPNTSFLGHLCAILVG 200
>gi|431898174|gb|ELK06869.1| Rhomboid domain-containing protein 2 [Pteropus alecto]
Length = 364
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 21/140 (15%)
Query: 85 LYYNMVSLIVKG-------RELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDV 137
+Y N VSL+ ER G+V+ +V + + S +I+L V
Sbjct: 69 VYENPVSLLCGAIIIWRFAGNFERTVGTVRHCFF--------TVIFALFSAIIFLSFEAV 120
Query: 138 TELYQC-----AIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVP 192
+ L + A GF+ V F+M + +S + VP++ PW+ L+ ++P
Sbjct: 121 SSLSKLGEVEDARGFTPVAFAMLGVNAVRSRMRRALVFGMVVPSLLVPWL-LLCASWLIP 179
Query: 193 NASFKGHLSGILVGLCYTET 212
SF ++ G+ +GL Y T
Sbjct: 180 QTSFLSNVCGLGIGLAYGVT 199
>gi|441514647|ref|ZP_20996463.1| rhomboid family protein [Gordonia amicalis NBRC 100051]
gi|441450558|dbj|GAC54424.1| rhomboid family protein [Gordonia amicalis NBRC 100051]
Length = 294
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 16/103 (15%)
Query: 31 TLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRD----------YKRLVLSALEHG 80
T TLI I L++++ V + G A TI + D Y RL+ S H
Sbjct: 71 TYTLIGINILVFLLCVAQAGFGDPG----AATIFSSGDLLKSDVAAGEYWRLLTSGFLHF 126
Query: 81 DDMHLYYNMVSLIVKGRELERMFGSVQF--VVLVSFLIISTSV 121
MH+ NM+SL + GR+LE G ++ V L++ L S +V
Sbjct: 127 SVMHVAVNMLSLYILGRDLELALGMARYLAVYLIALLGGSAAV 169
>gi|426254725|ref|XP_004021027.1| PREDICTED: rhomboid domain-containing protein 2 [Ovis aries]
Length = 364
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 19/174 (10%)
Query: 46 VLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGS 105
+L QP G+ + + + N + Y RLV + + + L + + ER G+
Sbjct: 38 LLQQPLAPSGLSLRSEALHNWQVY-RLVTYIFVYENPVSLLCGAIVIWRFAGNFERTVGT 96
Query: 106 VQ--FVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC-----AIGFSAVLFSMKTIR 158
V+ F LV + ++ +I+L V+ L + A GF+ V F+M +
Sbjct: 97 VRHCFFTLV----------FAVICAIIFLSFEAVSSLSKLGEVEDARGFTPVAFAMLGVS 146
Query: 159 TRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLSGILVGLCYTET 212
+S + VP++ PW+ L+ ++P SF ++ G+ +GL Y T
Sbjct: 147 CVRSRMRRALVFGMVVPSLVVPWL-LLCASWLIPQTSFLSNVCGLGIGLAYGFT 199
>gi|168186765|ref|ZP_02621400.1| conserved membrane protein [Clostridium botulinum C str. Eklund]
gi|169295367|gb|EDS77500.1| conserved membrane protein [Clostridium botulinum C str. Eklund]
Length = 202
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 31 TLTLILIQTLLYIMNVLAQP--WDS-----LGICISAHTILNQRDYKRLVLSALEHGDDM 83
T LI I L+YI+ + DS L + + +T+++ Y RL+ HG +
Sbjct: 24 TFILITINVLVYIITAILSENILDSDIRVLLFLGANENTLVSSGQYYRLITCMFLHGGLV 83
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVL 111
HL NM +L G +ER++G ++++++
Sbjct: 84 HLALNMYALEAIGPIVERIYGKMKYIII 111
>gi|169347291|ref|ZP_02866229.1| hypothetical protein CLOSPI_00006 [Clostridium spiroforme DSM 1552]
gi|169293908|gb|EDS76041.1| peptidase, S54 family [Clostridium spiroforme DSM 1552]
Length = 214
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
+++ +DY RL+ + H MH++ N SL+ G +E + G ++ +++ + +T++
Sbjct: 49 VIHLKDYYRLITANFIHFGLMHIFCNCYSLLNFGSVMEYLLGQKRYAIVMIASMFATTI- 107
Query: 123 YVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWI 182
+YL+N G S +F + + + + + + + I
Sbjct: 108 ---FPCALYLINGSGAN--SVMGGISGAIFGLMGALLALAMEFK-SVYAYVFKQIASSVI 161
Query: 183 ELVIIHLMVPNASFKGHLSGILVGL 207
+++I +VP+ S GH+SG++ G
Sbjct: 162 LMLLISFLVPSISLVGHVSGMIGGF 186
>gi|172058814|ref|YP_001815274.1| rhomboid family protein [Exiguobacterium sibiricum 255-15]
gi|171991335|gb|ACB62257.1| Rhomboid family protein [Exiguobacterium sibiricum 255-15]
Length = 248
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 29/186 (15%)
Query: 34 LILIQTLLYIMNVLAQ----PWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNM 89
ILIQ L+++ L + L + + + ++ R+V + H D H+ +N
Sbjct: 21 FILIQVALFVIEQLNAFFNFGFSPLNYGAAINLFIGNGEWWRVVTATFLHYDFWHIAFNT 80
Query: 90 VSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFSA 149
+LI+ LERM G +F SF ++ ++ V+ + + E + G S
Sbjct: 81 FALIIFAPALERMIGHAKF---ASFYLLVGTLANVLTYFT------KINEPFYGQAGASG 131
Query: 150 VLFSM--------KTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGHLS 201
+ + + RT S D + FS A+ A I L+ N S GHL
Sbjct: 132 AILGLLGFYVYLGRFKRTVISADDARLVYIFS--AITA------IFTLLGSNVSVFGHLY 183
Query: 202 GILVGL 207
G ++G
Sbjct: 184 GFVLGF 189
>gi|453080943|gb|EMF08993.1| rhomboid protein [Mycosphaerella populorum SO2202]
Length = 269
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 63/154 (40%), Gaps = 18/154 (11%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQ-FVVLVSFLIISTSV 121
++N RL L H HL N+ +LI E G++ F++ + +
Sbjct: 55 LINLGTLYRLNTFPLIHKSVFHLLLNLFTLIPLLERFESEHGTITTFILFTGPFGLIPGL 114
Query: 122 CYVMLSYVIYLMNHDVTELYQCAIGFSAVLF------SMKTIRTRQSPDVTHQLLNFSVP 175
Y L ++ +N V +G S +F S+K +T +P+ L F +P
Sbjct: 115 AYTFLERYVFHLNTGV-------VGSSIWVFLLLANESIKLYKT--NPEFV--LGGFGIP 163
Query: 176 AVYAPWIELVIIHLMVPNASFKGHLSGILVGLCY 209
P ++I+ +VP S GHL G VG +
Sbjct: 164 TWLTPIFGILIVWFLVPGTSLLGHLCGAAVGYLW 197
>gi|336319156|ref|YP_004599124.1| Rhomboid family protein [[Cellvibrio] gilvus ATCC 13127]
gi|336102737|gb|AEI10556.1| Rhomboid family protein [[Cellvibrio] gilvus ATCC 13127]
Length = 299
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 21/142 (14%)
Query: 71 RLVLSALEH--GDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
R + SA H G H+ NMV+L G LE G V++ L I SV ++++
Sbjct: 108 RFLTSAFLHSPGSIFHIVLNMVALWTVGPYLEVQLGRVRYATLYLLSAIGGSVVVLLVAA 167
Query: 129 VIYLMNHDVTELYQCAIGFSAVLFSMK----TIRTRQSPDVTHQLLNFSVPAVYAPWIEL 184
+ + ++ Y +G S +F + + R L V V++
Sbjct: 168 LGW------SDWYSGVVGASGAVFGLFGAAFVVMWRSGHPAQGMLGVIGVNMVFS----- 216
Query: 185 VIIHLMVPNASFKGHLSGILVG 206
+VP S++GHL G++ G
Sbjct: 217 ----FVVPGISWQGHLGGLVTG 234
>gi|255536607|ref|YP_003096978.1| Rhomboid family protein [Flavobacteriaceae bacterium 3519-10]
gi|255342803|gb|ACU08916.1| Rhomboid family protein [Flavobacteriaceae bacterium 3519-10]
Length = 243
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 24 FHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYK-RLVLSALEHGDD 82
F+ IPP T LI+I +++I+ L Q D + + ++A + + +++ HG
Sbjct: 2 FNNIPPLTRNLIIINVIVFILVWLMQN-DQITMYLAAFYPFSPFFHSWQIITHMFMHGSF 60
Query: 83 MHLYYNMVSLIVKGRELERMFGSVQFVVL 111
MH+ +NM++L G LE++ G ++++L
Sbjct: 61 MHILFNMMTLYSFGPVLEQVLGEKKYLLL 89
>gi|313675606|ref|YP_004053602.1| rhomboid family protein [Marivirga tractuosa DSM 4126]
gi|312942304|gb|ADR21494.1| Rhomboid family protein [Marivirga tractuosa DSM 4126]
Length = 205
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 58 ISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLII 117
+ + ++ ++ Y R++ S H D +HL +NM++L G +E F Q +FL +
Sbjct: 30 FNPYQVVYRKQYYRMITSGFLHADYVHLIFNMLTLYFFGDAVEYYFN--QLTNYGTFLYV 87
Query: 118 STSVCYVMLSYVIYLMNHDVTELYQC--------AIGFSAVLFSMKT 156
+ +++S + L+ H Y A+ FS++LF+ T
Sbjct: 88 GLYLSAIVVSDIPSLIKHKENPNYNALGASGAVSAVVFSSILFNPMT 134
>gi|451342807|ref|ZP_21911890.1| hypothetical protein HMPREF9943_00115 [Eggerthia catenaformis OT
569 = DSM 20559]
gi|449338538|gb|EMD17683.1| hypothetical protein HMPREF9943_00115 [Eggerthia catenaformis OT
569 = DSM 20559]
Length = 188
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
I +++Y R++ H D +HL+ NM + G E M G++Q+ +LV S+ +C
Sbjct: 41 IHEKKEYWRILTCHFIHIDPIHLFMNMYCIYYLGHFFESMMGTLQYGILV----FSSMIC 96
Query: 123 YVMLSY 128
+++Y
Sbjct: 97 SGLITY 102
>gi|422012514|ref|ZP_16359194.1| peptidase, S54 family [Actinomyces georgiae F0490]
gi|394755698|gb|EJF38895.1| peptidase, S54 family [Actinomyces georgiae F0490]
Length = 305
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 36/204 (17%)
Query: 29 PGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYN 88
P TL LI L+Y++ ++ SL + + A + R + +V SA H +H+++N
Sbjct: 91 PVTLVLIGACVLMYLLALVVPAVQSLFMLVPAW--VGPRPWI-VVTSAFLHSGFLHVFFN 147
Query: 89 MVSLIVKGRELERMFGSVQF--VVLVSFLIISTSV---CYVMLSYVIYLMNHDVTELYQC 143
M++L G +ER G ++ V L+S L S V C+V L+
Sbjct: 148 MLTLYWVGSVVERAIGHWRYGAVCLISALGGSALVMLWCFV-----------QPAALFAA 196
Query: 144 AIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMV----PNASFKGH 199
+G S +F + + V +L S AP + L+ I+L+ P S++ H
Sbjct: 197 TVGASGAVFGLF-----GAVFVLQRLSGSST----APILILLGINLVYGFANPGVSWQAH 247
Query: 200 LSGILVGLCYTETSLGRLVERSGR 223
+ G L G T L+ SGR
Sbjct: 248 IGGFLAGAAATWA----LLRTSGR 267
>gi|237732716|ref|ZP_04563197.1| predicted protein [Mollicutes bacterium D7]
gi|229384211|gb|EEO34302.1| predicted protein [Coprobacillus sp. D7]
Length = 209
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 70/151 (46%), Gaps = 13/151 (8%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
+L Y RL+ + H MH++ N SL+ G +E + G ++++ ++I++++
Sbjct: 49 VLAGNQYWRLISANFIHFGIMHIFCNCYSLVNLGSVMEYLLGMKRYLI----ILIASALA 104
Query: 123 YVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKT---IRTRQSPDVTHQLLNFSVPAVYA 179
+L V Y++ + G S +F + + DV L + +
Sbjct: 105 TTILPTVFYILTGNGAS--SIMGGISGAIFGLMGALLALAWKFKDVYAYLFK----QISS 158
Query: 180 PWIELVIIHLMVPNASFKGHLSGILVGLCYT 210
+ +++I ++VP+ S GH+SG++ G T
Sbjct: 159 SVLLMLLISILVPSISLSGHISGMIGGFIAT 189
>gi|415728653|ref|ZP_11472098.1| rhomboid family membrane protein [Gardnerella vaginalis 6119V5]
gi|388065069|gb|EIK87574.1| rhomboid family membrane protein [Gardnerella vaginalis 6119V5]
Length = 236
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 75 SALEHGDDM-HLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIY-- 131
S H ++ H+++NM+ L G ELER FG +F L +LI C ++ +I+
Sbjct: 70 SMFVHAPNITHIFFNMLCLWSLGAELERYFGRWKFFGL--YLISGLGGC---IADIIWCR 124
Query: 132 LMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVI-IHLM 190
++N+ + Y + ++ ++ + R ++ ++ WI + + + ++
Sbjct: 125 IINNWQSASYGASGAIMGLIGALLVAQWRLGENMRGTII----------WIAITLAMPII 174
Query: 191 VPNASFKGHLSGILVG 206
+PN +++ H+ G+++G
Sbjct: 175 IPNIAWQAHVGGLIIG 190
>gi|300742642|ref|ZP_07072663.1| rhomboid family protein [Rothia dentocariosa M567]
gi|300381827|gb|EFJ78389.1| rhomboid family protein [Rothia dentocariosa M567]
Length = 261
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 88/210 (41%), Gaps = 25/210 (11%)
Query: 25 HLIPPGTLTLILIQTLLYIMN-VLAQPWDSLGICISAHTILNQRDYKRLVLSALEH--GD 81
+P T TLI I ++Y++ ++ Q W + +Y R++ S H D
Sbjct: 70 RFVPYVTYTLIGINVVVYLLQLIIPQYWVYSMFALKWDYTEFTGEYYRVLTSGFLHSQND 129
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
H+ NM+SL + G LE+M G +++++ I+ S+ + L++ E+
Sbjct: 130 YSHIVMNMLSLYIFGIALEQMMGWWRYLLVYLLSIVGG-------SFGVLLLDDPTAEVV 182
Query: 142 QCAIG----FSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFK 197
+ G A L M +R R ++ ++ +V + +VP S++
Sbjct: 183 GASGGIFGLIGAYLVIMVILRERD--NIRALMIMIAVNVAFG---------FLVPGISWQ 231
Query: 198 GHLSGILVGLCYTETSLGRLVERSGRSVSR 227
H G +VG T L + + RS+ R
Sbjct: 232 AHAGGFVVGALATAALLAPQIIQRTRSIRR 261
>gi|295702423|ref|YP_003595498.1| S54 (rhomboid) family peptidase [Bacillus megaterium DSM 319]
gi|294800082|gb|ADF37148.1| peptidase, S54 (rhomboid) family protein [Bacillus megaterium DSM
319]
Length = 200
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 29 PGTLTLILIQTLLYIMNVLAQPWDSLGI--CISAHTILNQRDYKRLVLSALEHGDDMHLY 86
P T TLI I L+++ L I I +++++Q DY RL H HL
Sbjct: 16 PVTFTLICIHIALWLLAALPSNLAESFIHQLIGVNSLISQGDYWRLFTPIFLHLSFSHLL 75
Query: 87 YNMVSLIVKGRELERMFGSVQFVVL 111
+N SL + G ER+ S +F++
Sbjct: 76 FNSFSLFLLGPGAERILSSYKFLLF 100
>gi|205372266|ref|ZP_03225080.1| serine peptidase [Bacillus coahuilensis m4-4]
Length = 120
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 29 PGTLTLILIQTLLYIMN---VLAQPW--DSLGICISAHTILNQRDYKRLVLSALEHGDDM 83
P T+IL Q LLY + +L W + G + + Q ++ RLV S H
Sbjct: 16 PVITTIILFQVLLYALTKIPLLPHIWLFEWFG---GVNLYIMQGEWWRLVTSIFLHYSLS 72
Query: 84 HLYYNMVSLIVKGRELERMFGSVQF 108
HL +N ++L++ G LE+ GS++F
Sbjct: 73 HLVFNSLTLLLFGPYLEQFIGSIRF 97
>gi|167756710|ref|ZP_02428837.1| hypothetical protein CLORAM_02248 [Clostridium ramosum DSM 1402]
gi|374627722|ref|ZP_09700124.1| hypothetical protein HMPREF0978_03444 [Coprobacillus sp.
8_2_54BFAA]
gi|167702885|gb|EDS17464.1| peptidase, S54 family [Clostridium ramosum DSM 1402]
gi|373912961|gb|EHQ44804.1| hypothetical protein HMPREF0978_03444 [Coprobacillus sp.
8_2_54BFAA]
Length = 214
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 70/151 (46%), Gaps = 13/151 (8%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
+L Y RL+ + H MH++ N SL+ G +E + G ++++ ++I++++
Sbjct: 49 VLAGNQYWRLISANFIHFGIMHIFCNCYSLVNLGSVMEYLLGMKRYLI----ILIASALA 104
Query: 123 YVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKT---IRTRQSPDVTHQLLNFSVPAVYA 179
+L V Y++ + G S +F + + DV L +V
Sbjct: 105 TTILPTVFYILTGNGAS--SIMGGISGAIFGLMGALLALAWKFKDVYAYLFKQISSSV-- 160
Query: 180 PWIELVIIHLMVPNASFKGHLSGILVGLCYT 210
+ +++I ++VP+ S GH+SG++ G T
Sbjct: 161 --LLMLLISILVPSISLSGHISGMIGGFIAT 189
>gi|225352405|ref|ZP_03743428.1| hypothetical protein BIFPSEUDO_04025 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225156912|gb|EEG70281.1| hypothetical protein BIFPSEUDO_04025 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 264
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 65/148 (43%), Gaps = 19/148 (12%)
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC 143
H+ +NM++L G LERM G + ++ L + S M+ + ++ + +T Y
Sbjct: 96 HILFNMLTLWCVGPVLERMMGHLPYLALYVLSGLGGSAG--MMVWALFSQDGWLTSAYGA 153
Query: 144 AIG----FSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKGH 199
+ F+A+L + I + L+NF +P ++ PN +++ H
Sbjct: 154 SGALFGLFAAILVVYQRIGIDIRSMLIWMLINFLMP-------------IITPNIAWQAH 200
Query: 200 LSGILVGLCYTETSLGRLVERSGRSVSR 227
+ G ++G + + L G+S+ +
Sbjct: 201 VGGFIIGGVFAWLLVSGLHALRGKSLQQ 228
>gi|93005136|ref|YP_579573.1| rhomboid-like protein [Psychrobacter cryohalolentis K5]
gi|92392814|gb|ABE74089.1| Rhomboid-like protein [Psychrobacter cryohalolentis K5]
Length = 230
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCY 123
+N + R V H D MHL +NM +L GR +E ++ +F+ FL+ V
Sbjct: 64 VNNGQWDRFVTHGFIHADSMHLLFNMFTLYFFGRAIEGLYQ--KFLFGYGFLLF--YVLA 119
Query: 124 VMLSYVIYLMNHDVTELY---QCAIGFSAVLFSM 154
++++ + + H + Y + G SAVLF+
Sbjct: 120 IIVAMIPSYIKHKQSASYLSLGASGGVSAVLFAF 153
>gi|387902202|ref|YP_006332541.1| rhomboid family protein [Burkholderia sp. KJ006]
gi|387577094|gb|AFJ85810.1| Rhomboid family protein [Burkholderia sp. KJ006]
Length = 658
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 55 GICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVV 110
G + +T+ Q RL+ SA HG MH+ NM LIV G LER+ G+++F V
Sbjct: 59 GANFAPYTLTGQP--WRLLTSAFLHGSWMHVALNMYMLIVLGTVLERVGGTLRFGV 112
>gi|134295675|ref|YP_001119410.1| rhomboid family protein [Burkholderia vietnamiensis G4]
gi|134138832|gb|ABO54575.1| Rhomboid family protein [Burkholderia vietnamiensis G4]
Length = 643
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 55 GICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVV 110
G + +T+ Q RL+ SA HG MH+ NM LIV G LER+ G+++F V
Sbjct: 44 GANFAPYTLTGQP--WRLLTSAFLHGSWMHVALNMYMLIVLGTVLERVGGTLRFGV 97
>gi|284040403|ref|YP_003390333.1| rhomboid family protein [Spirosoma linguale DSM 74]
gi|283819696|gb|ADB41534.1| Rhomboid family protein [Spirosoma linguale DSM 74]
Length = 259
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
+L+ HG H++ NM+ L+V G LER +G+ +F F + ++ + S +
Sbjct: 44 QLLTHMFLHGGFNHIFSNMIGLVVFGPMLERNWGAQRFTFFYFFTGLGAALLF---SGIN 100
Query: 131 YLMNHDVTELYQC 143
Y HDV E Q
Sbjct: 101 YFEVHDVYETVQA 113
>gi|407451588|ref|YP_006723312.1| hypothetical protein B739_0812 [Riemerella anatipestifer RA-CH-1]
gi|403312573|gb|AFR35414.1| putative membrane protein [Riemerella anatipestifer RA-CH-1]
Length = 244
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 24 FHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTIL--NQRDYKRLVLSALEHGD 81
F IPP T LI+I +++I+ + + A+ L N R ++ ++ HG
Sbjct: 2 FQNIPPITRNLIIINVVVFILGYFLP--AGIENFLPAYFPLSPNFRSWQ-IITHMFMHGG 58
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
HL +NM+ L G LER G ++++L F + + + + +Y Y + L+
Sbjct: 59 FTHLLFNMIGLWSFGSVLERALGEKKYLILYFFSGLGAFILFNVWNY--YHFYQLTSSLH 116
Query: 142 QCAIGFSAVL 151
Q + ++V
Sbjct: 117 QQGVDLASVF 126
>gi|390459001|ref|XP_002743989.2| PREDICTED: rhomboid domain-containing protein 2 [Callithrix
jacchus]
Length = 364
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 21/137 (15%)
Query: 85 LYYNMVSLIVKG-------RELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDV 137
+Y N +SL+ ER G+V+ +V + + S +I+L V
Sbjct: 69 VYENPISLLCGAIIIWRFAGNFERTVGTVRHCFF--------TVIFAIFSAIIFLSFEAV 120
Query: 138 TELYQC-----AIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVP 192
+ L + A GF+ V F+M + + +S + VP+V PW+ L+ ++P
Sbjct: 121 SSLSKLGEVEDARGFTPVAFAMLGVTSVRSRMRRALVFGMVVPSVLVPWL-LLGASWLIP 179
Query: 193 NASFKGHLSGILVGLCY 209
SF ++ G+ +GL Y
Sbjct: 180 QTSFLSNVCGLCIGLSY 196
>gi|413955676|gb|AFW88325.1| hypothetical protein ZEAMMB73_179598 [Zea mays]
Length = 293
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 88 NMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGF 147
++V L++ G+ LE ++G+ + + + + +S S C + V+Y + + + LY GF
Sbjct: 77 SIVGLLLFGKVLEPLWGAKELLKFIFIVNLSISACVFVTMIVLYYITQEESYLYTPVSGF 136
Query: 148 SAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASF 196
VL + + PD Q LN V + A WI ++ + V + F
Sbjct: 137 YGVLSGLLVGIKQILPD---QELNLFVFKISAKWIPSIVAFISVAVSFF 182
>gi|76801230|ref|YP_326238.1| GlpG-like protein [Natronomonas pharaonis DSM 2160]
gi|76557095|emb|CAI48669.1| rhomboid family protein [Natronomonas pharaonis DSM 2160]
Length = 314
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 45/105 (42%), Gaps = 13/105 (12%)
Query: 73 VLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFV--VLVSFLIISTSVCYVMLSYVI 130
V+S HG MHL +N + L G +ER GS +FV L S +I V L
Sbjct: 145 VISVFSHGSPMHLLFNAIVLYFFGPLVERQIGSKKFVGLFLASGIIAGLGQVGVGL---- 200
Query: 131 YLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP 175
VT +G S L ++ + SPD+ LL F +P
Sbjct: 201 ------VTSEGVAVLGASGALMAIMGVLAITSPDLK-VLLFFFIP 238
>gi|291515609|emb|CBK64819.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Alistipes shahii WAL 8301]
Length = 200
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 76/188 (40%), Gaps = 17/188 (9%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDS-LGICISAHTILNQRDYKRLVLSALEHGDDMHLY 86
PP LI+I L+Y+ L D+ + C + Y+ + L H + H++
Sbjct: 8 PPVVKNLIIINVLVYMATALLPVGDTIMQYCALSLGTPYFHTYQFITYMFL-HANFEHIF 66
Query: 87 YNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIG 146
+NM +L + GR LE GS +F+ VC V + + YL EL +G
Sbjct: 67 FNMFALWMFGRTLEYELGSQRFLTF-------YMVCGVGAALIQYLTALAFGELPLLLVG 119
Query: 147 FSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPW-------IELVIIHLMVPNASFKGH 199
S + + P+ LL +P + A W IEL + V N + H
Sbjct: 120 ASGAVMGLLLAFGVMHPNAVIMLLIPPIP-MKAKWFVIIYAVIELFLGWKGVGNVAHFAH 178
Query: 200 LSGILVGL 207
+ G+L G
Sbjct: 179 VGGMLWGF 186
>gi|212715177|ref|ZP_03323305.1| hypothetical protein BIFCAT_00066 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212661858|gb|EEB22433.1| hypothetical protein BIFCAT_00066 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 264
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 63/148 (42%), Gaps = 19/148 (12%)
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQC 143
H+ +NM++L G LERM G + ++ L + S M+ + + + +T Y
Sbjct: 96 HILFNMLTLWCVGPVLERMMGHLPYLALYVLSGLGGSAG--MMVWALLSQDGWLTSAYGA 153
Query: 144 AIGFSAVLFSMKTIRTRQSPDV----THQLLNFSVPAVYAPWIELVIIHLMVPNASFKGH 199
+ + S+ + R D+ L+NF +P ++ PN +++ H
Sbjct: 154 SGALFGLFASILVVYQRIGIDIRSMLIWMLINFLMP-------------IITPNIAWQAH 200
Query: 200 LSGILVGLCYTETSLGRLVERSGRSVSR 227
+ G +VG + + L G+S+ +
Sbjct: 201 IGGFIVGGVFAWLLVSGLHALRGKSLQQ 228
>gi|260063472|ref|YP_003196552.1| transmembrane rhomboid family protein [Robiginitalea biformata
HTCC2501]
gi|88782916|gb|EAR14090.1| putative transmembrane rhomboid family protein [Robiginitalea
biformata HTCC2501]
Length = 291
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 80/202 (39%), Gaps = 35/202 (17%)
Query: 43 IMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERM 102
+ L QPW LV + HG H+++NM+ L GR
Sbjct: 54 FFDFLVQPWS-------------------LVTYSFLHGGLFHIFFNMLMLYYVGRIFLNF 94
Query: 103 FGSVQFVVLVSFLIISTSVCYVMLSYVIY-LMNHDVTELYQCAIGFSAVLFSMKTIRTRQ 161
+G +F+ V FL + + + +Y I+ + + L + G AVL + T +Q
Sbjct: 95 YGPRRFIN-VYFLGVILGGAFFLAAYNIFPVFYQSQSPLIGASAGVMAVLIFVCTYLPQQ 153
Query: 162 SPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFKG----HLSGILVGLCYTETSL--G 215
+L F++ Y +++ +++P G HL G L+G Y S G
Sbjct: 154 EV----RLFFFNLKLWYIGAFFVLLDLVLIPTGDNPGGRIAHLGGALLGYLYARRSAQGG 209
Query: 216 RLVERSGRSVSRVVNTLTNVFK 237
L G SR+++ +F+
Sbjct: 210 DL----GAGFSRMLDWFAGLFE 227
>gi|452206496|ref|YP_007486618.1| rhomboid family protein [Natronomonas moolapensis 8.8.11]
gi|452082596|emb|CCQ35857.1| rhomboid family protein [Natronomonas moolapensis 8.8.11]
Length = 326
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 24/166 (14%)
Query: 73 VLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYL 132
V+S HG HL +N ++L G +ER GS +F L +++ V + + L
Sbjct: 157 VVSVFSHGGPSHLLFNAIALYFFGPIVERQVGSRKFAA----LFLASGVLAGLGQVGVGL 212
Query: 133 MNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVP----------AVYAPWI 182
VT +G S L ++ + SPD+ LL F +P A ++ +
Sbjct: 213 ----VTGEQVAVLGASGALMAIMGVLAVTSPDLK-VLLFFFIPMSIRTLTVLFAAFSIFA 267
Query: 183 ELVIIHLMVPNASFKGHLSGILVGLCYTETSLGRLVERSGRSVSRV 228
+ ++ A F HL G+++GL Y R+ +R GR ++
Sbjct: 268 FVADGGILSGVAHFA-HLVGLVIGLWYGN----RIKDRIGRGPKQL 308
>gi|319640216|ref|ZP_07994942.1| transmembrane rhomboid family protein [Bacteroides sp. 3_1_40A]
gi|317388203|gb|EFV69056.1| transmembrane rhomboid family protein [Bacteroides sp. 3_1_40A]
Length = 233
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPW-----DSLGICISAHTILNQRDYKRLVLSALEHGD 81
IP T L++I L + V+A + D LG+ + N +L+ HG
Sbjct: 4 IPTVTKNLLIINVLCFFGGVVAMKYGINLNDLLGLHFFMASDFNP---AQLITYMFMHGG 60
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFV 109
H+++NM +L + GR LE+++G +F+
Sbjct: 61 FQHIFFNMFALWMFGRTLEQVWGPKRFL 88
>gi|251778447|ref|ZP_04821367.1| rhomboid family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243082762|gb|EES48652.1| rhomboid family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 321
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
Q + RLV A HG HL +NM +L + G ++E++FG +++++ I++S V
Sbjct: 181 QGEVWRLVTCAFLHGGITHLLFNMYALYILGPQVEKIFGIKKYLIIYFVSAITSSSLGVA 240
Query: 126 LS 127
L+
Sbjct: 241 LN 242
>gi|213964252|ref|ZP_03392484.1| rhomboid family protein [Capnocytophaga sputigena Capno]
gi|213953113|gb|EEB64463.1| rhomboid family protein [Capnocytophaga sputigena Capno]
Length = 219
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 79 HGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSY 128
HGD MHL++NM +L G LE ++G +F+ + ++ + M++Y
Sbjct: 24 HGDFMHLFFNMYALWAFGTPLENIWGRNKFLFFYFSCGVGAALLHTMVNY 73
>gi|339441829|ref|YP_004707834.1| hypothetical protein CXIVA_07650 [Clostridium sp. SY8519]
gi|338901230|dbj|BAK46732.1| hypothetical protein CXIVA_07650 [Clostridium sp. SY8519]
Length = 218
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 25 HLIPPGTLTLILIQTLLYIMNVLAQPWDS----LGICISAHTILNQRDYKRLVLSALEHG 80
+L P T ++L + I++VL D L + + + ++ RL+ S+ H
Sbjct: 19 YLTPVNTGIVLLNAVIFLILSVLGDTEDGAFMYLHGAMYPDAVFDSGEWYRLLTSSFLHF 78
Query: 81 DDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
HL NMV L G LE+ FG +++ V + + + +S+
Sbjct: 79 GISHLVNNMVMLFCLGSYLEKAFGRIKYAVFYAAVCVFSSLA 120
>gi|301776194|ref|XP_002923515.1| PREDICTED: LOW QUALITY PROTEIN: rhomboid domain-containing protein
2-like [Ailuropoda melanoleuca]
Length = 364
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 21/140 (15%)
Query: 85 LYYNMVSLIVKG-------RELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDV 137
+Y N VSL+ ER G+V+ +V + + S +I+L V
Sbjct: 69 VYENPVSLLCGAIIIWRFAGNFERTVGTVRHCFF--------TVIFAIFSAIIFLSFEAV 120
Query: 138 TELYQC-----AIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVP 192
+ L + A GF+ V F+M + + +S + VP++ PW+ L+ ++P
Sbjct: 121 SSLSKLGEVEDARGFTPVAFAMLGVNSVRSRMRRALVFGMVVPSMLVPWL-LLCASWLIP 179
Query: 193 NASFKGHLSGILVGLCYTET 212
SF ++ G+ +GL Y T
Sbjct: 180 QTSFLSNVCGLGIGLTYGLT 199
>gi|301300052|ref|ZP_07206273.1| peptidase, S54 family [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300852350|gb|EFK80013.1| peptidase, S54 family [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 220
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 88/217 (40%), Gaps = 37/217 (17%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSL------GICISAHTILNQRDYKRLVLSALEHGD 81
P T TLI++ ++YI+ L +++ G S + I Q Y RL+ H
Sbjct: 9 PSITYTLIILNIVMYIIMTLFGGTENIVNLVRFGAKYSPYIINGQ--YWRLITPMFIHIG 66
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
HL NM++L G LE +FG +F+++ + + +C + S+
Sbjct: 67 LQHLLINMITLYFLGTLLENIFGKTRFLIIY----LVSGICGNIASFAF--------NFS 114
Query: 142 QCAIGFSAVLFSMKTI------RTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNAS 195
+ G S LF M R++P + F + + L I M N+
Sbjct: 115 SISAGASTALFGMFGSFLMLGESFRRNPYLQTMSRQFFLLVI------LNIFFGMFGNSD 168
Query: 196 FKGHL----SGILVGLCYTETSLGRLVERSGRSVSRV 228
GHL SG L+G +LGR V + R VS V
Sbjct: 169 LAGHLGGLVSGFLLGYVVGVPNLGR-VPKVKRIVSFV 204
>gi|449134320|ref|ZP_21769821.1| glpG protein [Rhodopirellula europaea 6C]
gi|448886950|gb|EMB17338.1| glpG protein [Rhodopirellula europaea 6C]
Length = 340
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCY 123
+ + + R++ A+ HG MHL +NM+ + + G +ER+ GS V L++ +S +
Sbjct: 195 IKKGEVWRIITPAVLHGSPMHLVFNMMWVYMLGGVIERLHGSWFLVFLMTITHVSGMIVQ 254
Query: 124 VMLSYVIYLMNHDVTELYQCAIGFSAV---LFSMKTIRTRQSPDVTHQLLNFSV 174
++L D E AIG S +F IR R P + F+V
Sbjct: 255 IVLP--------DWLE-SPMAIGASGAALGIFGFIWIRPRFQPTYPVGIPPFNV 299
>gi|188589117|ref|YP_001920138.1| rhomboid family protein [Clostridium botulinum E3 str. Alaska E43]
gi|188499398|gb|ACD52534.1| rhomboid family protein [Clostridium botulinum E3 str. Alaska E43]
Length = 321
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 66 QRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVM 125
Q + RLV A HG HL +NM +L + G ++E++FG +++++ I++S V
Sbjct: 181 QGEVWRLVACAFLHGGITHLLFNMYALYILGPQVEKIFGIKKYLIIYFVSAITSSSLGVA 240
Query: 126 LS 127
L+
Sbjct: 241 LN 242
>gi|145221663|ref|YP_001132341.1| rhomboid family protein [Mycobacterium gilvum PYR-GCK]
gi|145214149|gb|ABP43553.1| Rhomboid family protein [Mycobacterium gilvum PYR-GCK]
Length = 279
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 26 LIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHL 85
L P T LI I L + + +A P + + + + Y RL+ SA H HL
Sbjct: 65 LTPVVTYALIGINLLAFALQ-MASPGLQRAFGLWSPAVADGEMY-RLLTSAFLHFGLTHL 122
Query: 86 YYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAI 145
+NM++L G LE G +F+ L + SV ++YL+ + L A
Sbjct: 123 AFNMLALYFVGPPLEAALGRARFITLYLVSALGGSV-------LVYLLT--LNALTAGAS 173
Query: 146 GFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVP-----NASFKGHL 200
G LF + R+ LN V +V A + + ++P N S++GH+
Sbjct: 174 GAVFGLFGATFVVGRK--------LNMDVRSVMAIIVLNLAFTFLIPLFTSQNISWQGHI 225
Query: 201 SGILVG 206
G++ G
Sbjct: 226 GGLVTG 231
>gi|429749212|ref|ZP_19282347.1| peptidase, S54 family [Capnocytophaga sp. oral taxon 332 str.
F0381]
gi|429168857|gb|EKY10667.1| peptidase, S54 family [Capnocytophaga sp. oral taxon 332 str.
F0381]
Length = 212
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCY 123
+ + DY RLV S H D HL NMVSL L R GSV F+V+ +I+ S
Sbjct: 36 VQKGDYIRLVSSGFLHADWQHLILNMVSLFFFQGLLIRSIGSVLFLVVYFGAMIAGS--- 92
Query: 124 VMLSYVIYLMNHDVTELYQCAIGFSAVL 151
+ S+ +Y + Y AIG S +
Sbjct: 93 -LFSWYLYQ-----RQWYYSAIGASGAV 114
>gi|352081010|ref|ZP_08951888.1| Rhomboid family protein [Rhodanobacter sp. 2APBS1]
gi|389798976|ref|ZP_10201983.1| hypothetical protein UUC_14538 [Rhodanobacter sp. 116-2]
gi|351683051|gb|EHA66135.1| Rhomboid family protein [Rhodanobacter sp. 2APBS1]
gi|388444005|gb|EIM00132.1| hypothetical protein UUC_14538 [Rhodanobacter sp. 116-2]
Length = 205
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVV 110
++V SA HG H+ +NM++L + G +ER FG+ +F V
Sbjct: 48 QIVTSAFMHGGVTHIMFNMLALYMFGGTIERTFGAREFTV 87
>gi|338730738|ref|YP_004660130.1| Rhomboid family protein [Thermotoga thermarum DSM 5069]
gi|335365089|gb|AEH51034.1| Rhomboid family protein [Thermotoga thermarum DSM 5069]
Length = 230
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 77/168 (45%), Gaps = 13/168 (7%)
Query: 63 ILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVC 122
+++ ++ R++ + HG +HL +N +L G +E ++G+ +FV+ F +++ +V
Sbjct: 47 LVSGGEWYRVITAMFVHGGLLHLLFNSYALFYFGTIVESIYGTEKFVI---FYLLAGAVG 103
Query: 123 YVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWI 182
+ ++V Y + V G +LF++ R +P Q ++ P I
Sbjct: 104 -NLATHVFYYRSISVGAS-GAIFGLVGILFALGF--RRDTPIFMRQFTGMAL----LPMI 155
Query: 183 ELVIIHLMVPNASFK--GHLSGILVGLCYTETSLGRLVERSGRSVSRV 228
+++ +P ++ HL G L G+ + R V S + SR+
Sbjct: 156 IFNVVYGFMPGSNINNAAHLGGFLAGMAIGYFADPRPVYASWKRGSRI 203
>gi|323340676|ref|ZP_08080928.1| rhomboid protease GluP [Lactobacillus ruminis ATCC 25644]
gi|335996819|ref|ZP_08562736.1| rhomboid family integral membrane protein [Lactobacillus ruminis
SPM0211]
gi|417974323|ref|ZP_12615144.1| rhomboid family integral membrane protein [Lactobacillus ruminis
ATCC 25644]
gi|323091799|gb|EFZ34419.1| rhomboid protease GluP [Lactobacillus ruminis ATCC 25644]
gi|335351889|gb|EGM53380.1| rhomboid family integral membrane protein [Lactobacillus ruminis
SPM0211]
gi|346329320|gb|EGX97618.1| rhomboid family integral membrane protein [Lactobacillus ruminis
ATCC 25644]
Length = 219
Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 29 PGTLTLILIQTLLYIMNVLAQPWDSLGICI----SAHTILNQRDYKRLVLSALEHGDDMH 84
P T LI I +Y++ A + G+ + + ++ +Y RL+ + H H
Sbjct: 9 PATCVLIGINVAIYLLMTFAGGSQNPGVLVRFGANFAPYVSNGEYWRLLTAMFLHIGLEH 68
Query: 85 LYYNMVSLIVKGRELERMFGSVQFVVL 111
L NM++L G LE + GSV+F VL
Sbjct: 69 LALNMLTLYFIGASLEPILGSVRFAVL 95
>gi|167752897|ref|ZP_02425024.1| hypothetical protein ALIPUT_01159 [Alistipes putredinis DSM 17216]
gi|167659966|gb|EDS04096.1| peptidase, S54 family [Alistipes putredinis DSM 17216]
Length = 213
Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 9/163 (5%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRD----YKRLVLSALEHGDDM 83
PP L LI+I L+ + L + + + A + N +LV HG
Sbjct: 11 PPVVLNLIIINALMLLATELLPVGNRI---VGALALFNVESPLFHSYQLVTYMFLHGGFS 67
Query: 84 HLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIY-LMNHDVTELYQ 142
HL++NM +L + GR LE GS +F+ + V +++ ++ Y N + L
Sbjct: 68 HLFFNMFALWMFGRTLEYELGSKRFLTYYMVCGVGAGVLQLLVGWLEYRYGNVGMMALMV 127
Query: 143 CAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELV 185
+G S +F + P+ LL +P + A W +V
Sbjct: 128 PTVGASGAVFGLLLAFGVMHPNAVIMLLIPPIP-MKAKWFVVV 169
>gi|227544150|ref|ZP_03974199.1| S54 family peptidase [Lactobacillus reuteri CF48-3A]
gi|338202576|ref|YP_004648721.1| rhomboid family integral membrane protein [Lactobacillus reuteri
SD2112]
gi|154705524|gb|ABS84188.1| rhomboid family protein [Lactobacillus reuteri]
gi|227185866|gb|EEI65937.1| S54 family peptidase [Lactobacillus reuteri CF48-3A]
gi|336447816|gb|AEI56431.1| rhomboid family integral membrane protein [Lactobacillus reuteri
SD2112]
Length = 219
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 27 IPPGTLTLILIQTLLYIMNVLAQPWDS----LGICISAHTILNQRDYKRLVLSALEHGDD 82
+ P TLTLI+ Q L+Y V A + L + + ++ + ++ RLV H
Sbjct: 8 LAPVTLTLIIFQILVYCWLVYAGGSTNTVTLLNMGARSTPLIREGEWWRLVSPVFLHVGL 67
Query: 83 MHLYYNMVSLIVKGRELERMFGSVQFVVL 111
HL N V+L+ GR +E FG + V++
Sbjct: 68 SHLVVNSVTLLYIGRYIEEFFGHWRMVII 96
>gi|436837540|ref|YP_007322756.1| rhomboid family protein [Fibrella aestuarina BUZ 2]
gi|384068953|emb|CCH02163.1| rhomboid family protein [Fibrella aestuarina BUZ 2]
Length = 275
Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 23/200 (11%)
Query: 30 GTLTLIL-IQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYN 88
GT+ L+L I T L + +P + IL R+Y RL+ + H D HL++N
Sbjct: 5 GTIGLLLAIITALITFSAFRRPSVFERYAFTVDGILTHREYSRLISAGFVHVDWWHLFFN 64
Query: 89 MVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCAIGFS 148
M +L+ +E + G + ++L ++ ++ +Y+ +D + A G
Sbjct: 65 MYALLSFAGTVEWVVGPWKVLILYLASLVGGNLL------ALYIHRNDSSYRAVGASGAV 118
Query: 149 AVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHL--------MVPNASFKGHL 200
A L TI ++ L F +PA W+ ++ L + N HL
Sbjct: 119 AGLI-FATIVLYPGLSISPLFLPFRMPA----WVFGLVYTLFSIYGLKSLNDNIGHDAHL 173
Query: 201 SGILVG---LCYTETSLGRL 217
G L G +C +T + R+
Sbjct: 174 GGALAGIFTICLLDTDVVRV 193
>gi|218200168|gb|EEC82595.1| hypothetical protein OsI_27155 [Oryza sativa Indica Group]
Length = 316
Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 88 NMVSLIVKGRELERMFGSVQ---FVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELYQCA 144
++V L++ G+ LE ++GS + F+ +V+F +TSVC + + +Y + + LY
Sbjct: 82 SIVGLLLFGKLLEPLWGSKELSKFIFVVNF---ATSVCVFITAIALYYTTQEESYLYAPL 138
Query: 145 IGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWI 182
GF VL + + +Q ++ Q LN V + A WI
Sbjct: 139 SGFYGVLTGL-LVGIKQL--MSEQELNLFVLKIKAKWI 173
>gi|71064855|ref|YP_263582.1| rhomboid family protein [Psychrobacter arcticus 273-4]
gi|71037840|gb|AAZ18148.1| possible Rhomboid family protein [Psychrobacter arcticus 273-4]
Length = 202
Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCY 123
+N + R V H D MHL +NM +L GR +E ++ +F+ FL+ V
Sbjct: 36 VNNGQWDRFVTHGFIHADSMHLLFNMFTLYFFGRAIEGLY--QKFLFGYGFLLF--YVLA 91
Query: 124 VMLSYVIYLMNHDVTELY---QCAIGFSAVLFSM 154
++++ + + H + Y + G SAVLF+
Sbjct: 92 IIVAMIPSYIKHKQSASYLSLGASGGVSAVLFAF 125
>gi|294786262|ref|ZP_06751516.1| rhomboid family protein [Parascardovia denticolens F0305]
gi|315225796|ref|ZP_07867584.1| rhomboid family membrane protein [Parascardovia denticolens DSM
10105 = JCM 12538]
gi|294485095|gb|EFG32729.1| rhomboid family protein [Parascardovia denticolens F0305]
gi|315119928|gb|EFT83060.1| rhomboid family membrane protein [Parascardovia denticolens DSM
10105 = JCM 12538]
Length = 266
Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 13/129 (10%)
Query: 81 DDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTEL 140
D H+++NMVSL + G LERM G +F+ L + SV +++ + + +
Sbjct: 103 DISHIFFNMVSLYLAGLSLERMLGHWEFLALYLVSGLGASVAFLLSA-----LASGPSSA 157
Query: 141 YQCAIGFSAVLFSM---KTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNASFK 197
IG S +F + + +SP + +S+ + LV+ L +++
Sbjct: 158 VASMIGASGAIFGLFGAMVVTALKSPGRQNA---WSMVVFLG--LILVVPMLFGSGVAWQ 212
Query: 198 GHLSGILVG 206
HL G VG
Sbjct: 213 AHLGGFAVG 221
>gi|149196159|ref|ZP_01873215.1| hypothetical protein LNTAR_23474 [Lentisphaera araneosa HTCC2155]
gi|149141006|gb|EDM29403.1| hypothetical protein LNTAR_23474 [Lentisphaera araneosa HTCC2155]
Length = 406
Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 75 SALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLS 127
SAL HGD H ++NM+ L V G + GS +++ L F ++ + ++++S
Sbjct: 59 SALVHGDIFHWFFNMMFLWVFGNAICSKLGSWRYIGLYLFFTLTAGIFHLLMS 111
>gi|313206565|ref|YP_004045742.1| rhomboid family protein [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|383485869|ref|YP_005394781.1| rhomboid family protein [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|416110158|ref|ZP_11591877.1| Rhomboid family protein [Riemerella anatipestifer RA-YM]
gi|442314232|ref|YP_007355535.1| putative membrane protein [Riemerella anatipestifer RA-CH-2]
gi|312445881|gb|ADQ82236.1| Rhomboid family protein [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|315023439|gb|EFT36447.1| Rhomboid family protein [Riemerella anatipestifer RA-YM]
gi|380460554|gb|AFD56238.1| rhomboid family protein [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|441483155|gb|AGC39841.1| putative membrane protein [Riemerella anatipestifer RA-CH-2]
Length = 244
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 24 FHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTIL--NQRDYKRLVLSALEHGD 81
F IPP T LI+I +++I+ + + A+ L N R ++ ++ HG
Sbjct: 2 FQNIPPITRNLIIINVVVFILGYFLP--AGIENFLPAYFPLSPNFRSWQ-IITHMFMHGG 58
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
HL +NM+ L G LER G ++++L F + + + + +Y Y + L+
Sbjct: 59 FPHLLFNMIGLWSFGSVLERALGEKKYLILYFFSGLGAFILFNVWNY--YHFYQLTSSLH 116
Query: 142 QCAIGFSAVL 151
Q + ++V
Sbjct: 117 QQGVDLASVF 126
>gi|429764176|ref|ZP_19296501.1| peptidase, S54 family [Clostridium celatum DSM 1785]
gi|429188574|gb|EKY29452.1| peptidase, S54 family [Clostridium celatum DSM 1785]
Length = 324
Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 62/146 (42%), Gaps = 12/146 (8%)
Query: 61 HTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTS 120
+ ++N RL+ HG H+ +NM +L + G E+E +G ++++++ F + S
Sbjct: 177 NELINHGQVWRLITCTFLHGGLAHIAFNMYALKIIGSEVEFAYGKIKYILIYLFSALGGS 236
Query: 121 VCYVMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAP 180
+ SY+ ++G S +F + H++ V ++
Sbjct: 237 I----FSYIF--------SPNSISVGASGAIFGLFGAMLVFGVKNRHRIGKNYVINLFKV 284
Query: 181 WIELVIIHLMVPNASFKGHLSGILVG 206
I + I + + N GH+ G++ G
Sbjct: 285 VIINIFIGVTISNIDNAGHIGGLVAG 310
>gi|378732203|gb|EHY58662.1| glycosylphosphatidylinositol transamidase [Exophiala dermatitidis
NIH/UT8656]
Length = 284
Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL-VSFLIISTSVCYVMLSYV 129
RL A H H+ + + LI E +G++ + L + L + Y++L V
Sbjct: 75 RLNTFAFIHNGFWHMLMDAICLIPLLERFEAEWGTLNSLALFMGPLGQIPAGIYLLLDGV 134
Query: 130 IYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHL 189
I D T + +I + +L + ++I+T ++ + ++ +P +P + LV+
Sbjct: 135 IL---RDNTPVVGSSI-WVFLLLASESIKTYKA-NPHFEISGHQIPTWISPLVILVVTSA 189
Query: 190 MVPNASFKGHLSGILVGLCY 209
++PN SF GHLSG + G +
Sbjct: 190 LIPNTSFLGHLSGCITGYLW 209
>gi|386321444|ref|YP_006017606.1| hypothetical protein RIA_1146 [Riemerella anatipestifer RA-GD]
gi|325335987|gb|ADZ12261.1| Uncharacterized membrane protein [Riemerella anatipestifer RA-GD]
Length = 245
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 24 FHLIPPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTIL--NQRDYKRLVLSALEHGD 81
F IPP T LI+I +++I+ + + A+ L N R ++ ++ HG
Sbjct: 3 FQNIPPITRNLIIINVVVFILGYFLP--AGIENFLPAYFPLSPNFRSWQ-IITHMFMHGG 59
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
HL +NM+ L G LER G ++++L F + + + + +Y Y + L+
Sbjct: 60 FPHLLFNMIGLWSFGSVLERALGEKKYLILYFFSGLGAFILFNVWNY--YHFYQLTSSLH 117
Query: 142 QCAIGFSAVL 151
Q + ++V
Sbjct: 118 QQGVDLASVF 127
>gi|404378219|ref|ZP_10983316.1| hypothetical protein HMPREF9021_00169 [Simonsiella muelleri ATCC
29453]
gi|294484089|gb|EFG31772.1| hypothetical protein HMPREF9021_00169 [Simonsiella muelleri ATCC
29453]
Length = 220
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 62 TILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL 111
I + Y R + SA H D MHL++NM +L R + ++G F+ L
Sbjct: 38 AITRDKQYYRFITSAFLHADMMHLFFNMFTLYFFSRVIAAVYGVWLFLGL 87
>gi|281344807|gb|EFB20391.1| hypothetical protein PANDA_012661 [Ailuropoda melanoleuca]
Length = 323
Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 21/140 (15%)
Query: 85 LYYNMVSLIVKG-------RELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDV 137
+Y N VSL+ ER G+V+ +V + + S +I+L V
Sbjct: 28 VYENPVSLLCGAIIIWRFAGNFERTVGTVRHCFF--------TVIFAIFSAIIFLSFEAV 79
Query: 138 TELYQC-----AIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVP 192
+ L + A GF+ V F+M + + +S + VP++ PW+ L+ ++P
Sbjct: 80 SSLSKLGEVEDARGFTPVAFAMLGVNSVRSRMRRALVFGMVVPSMLVPWL-LLCASWLIP 138
Query: 193 NASFKGHLSGILVGLCYTET 212
SF ++ G+ +GL Y T
Sbjct: 139 QTSFLSNVCGLGIGLTYGLT 158
>gi|261402576|ref|YP_003246800.1| rhomboid family protein [Methanocaldococcus vulcanius M7]
gi|261369569|gb|ACX72318.1| Rhomboid family protein [Methanocaldococcus vulcanius M7]
Length = 222
Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
+L+ S H HL NM L G LER+ G+ +++++ FLI S L+Y++
Sbjct: 55 QLITSIFMHATITHLLLNMFVLFFFGTYLERLIGAKKYILV--FLI---SGIVGNLAYIL 109
Query: 131 YLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIEL-VIIHL 189
Y +T Y ++G S +F + P + + VP + L +I L
Sbjct: 110 YC---HITGSYLPSVGSSGAIFGVMGALAILHPRLKVVIFPIPVPISIRVAVGLFALIDL 166
Query: 190 MVPNASFK------GHLSGILVGLCYTET 212
++ +FK HL+G+L GL + E
Sbjct: 167 ILLPYTFKTGIAHISHLAGLLTGLIFGEV 195
>gi|192360678|ref|YP_001980797.1| peptidase, rhomboid family [Cellvibrio japonicus Ueda107]
gi|190686843|gb|ACE84521.1| peptidase, rhomboid family [Cellvibrio japonicus Ueda107]
Length = 385
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 34 LILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLI 93
+I++ ++L+ +N W S TI R+Y R + + H + +HL N++SL
Sbjct: 184 MIILNSILFFINKDDFLWIMDNFAFSKSTI-EFREYYRFITAFFLHLNPVHLLINLISLG 242
Query: 94 VKGRELERMFGSVQFVVLVSFLIIST 119
V G LE+ FG ++ + LI+ST
Sbjct: 243 VLGGMLEQYFGRAKY---FNILILST 265
>gi|90961526|ref|YP_535442.1| rhomboid family integral membrane protein [Lactobacillus salivarius
UCC118]
gi|385840241|ref|YP_005863565.1| Integral membrane protein, Rhomboid family [Lactobacillus
salivarius CECT 5713]
gi|90820720|gb|ABD99359.1| Integral membrane protein, Rhomboid family [Lactobacillus
salivarius UCC118]
gi|300214362|gb|ADJ78778.1| Integral membrane protein, Rhomboid family [Lactobacillus
salivarius CECT 5713]
Length = 220
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 88/217 (40%), Gaps = 37/217 (17%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSL------GICISAHTILNQRDYKRLVLSALEHGD 81
P T TLI++ ++YI+ L +++ G S + I Q Y RL+ H
Sbjct: 9 PSITYTLIILNIVMYIVMTLFGGTENIANLVRFGAKYSPYIINGQ--YWRLITPMFIHIG 66
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
HL NM++L G LE +FG +F+++ + + +C + S+
Sbjct: 67 LQHLLINMITLYFLGTLLENIFGKTRFLIIY----LVSGICGNIASFAF--------NFS 114
Query: 142 QCAIGFSAVLFSMKTI------RTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNAS 195
+ G S LF M R++P + F + + L I M N+
Sbjct: 115 SISAGASTALFGMFGSFLMLGESFRRNPYLQTMSRQFFLLVI------LNIFFGMFGNSD 168
Query: 196 FKGHL----SGILVGLCYTETSLGRLVERSGRSVSRV 228
GHL SG L+G +LGR V + R VS V
Sbjct: 169 LAGHLGGLVSGFLLGYVVGVPNLGR-VPKVKRIVSFV 204
>gi|296118375|ref|ZP_06836955.1| rhomboid family protein [Corynebacterium ammoniagenes DSM 20306]
gi|295968653|gb|EFG81898.1| rhomboid family protein [Corynebacterium ammoniagenes DSM 20306]
Length = 217
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 76 ALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVL 111
A H D HL NM+ L++ GRE+ER FG+ FV L
Sbjct: 69 AFMHLDIGHLTVNMIMLLLIGREVERHFGTKLFVAL 104
>gi|257869580|ref|ZP_05649233.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
gi|357050773|ref|ZP_09111970.1| hypothetical protein HMPREF9478_01953 [Enterococcus saccharolyticus
30_1]
gi|257803744|gb|EEV32566.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
gi|355380925|gb|EHG28057.1| hypothetical protein HMPREF9478_01953 [Enterococcus saccharolyticus
30_1]
Length = 226
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSLGICISAHTILNQRDYKRLVLSALEHGDDMHLYY 87
P T T + IQTL++I+ ++ +G+ + + +Y R V H H
Sbjct: 12 PIFTYTFLAIQTLVFIIGYISPMTQVMGVMFGPY-VAYMNEYWRFVTPIFIHFGLAHFAV 70
Query: 88 NMVSLIVKGRELERMFGSVQFVVL 111
N V L G+++E ++G +F +L
Sbjct: 71 NSVILYFMGQQVEAIYGHARFFIL 94
>gi|383789325|ref|YP_005473899.1| hypothetical protein [Spirochaeta africana DSM 8902]
gi|383105859|gb|AFG36192.1| putative membrane protein [Spirochaeta africana DSM 8902]
Length = 232
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 57 CISAHTILNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQF 108
++ + + QR Y + HG H+ +NM+ L V G+ LER GS++F
Sbjct: 66 AMNPYLTIYQRMYWQPFTYMFLHGTVTHILFNMLILFVFGQYLERALGSIEF 117
>gi|404443258|ref|ZP_11008430.1| rhomboid family protein [Mycobacterium vaccae ATCC 25954]
gi|403655930|gb|EJZ10759.1| rhomboid family protein [Mycobacterium vaccae ATCC 25954]
Length = 289
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 22/141 (15%)
Query: 71 RLVLSALEHGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVI 130
RLV SA H H+ +NM++L G LE G ++FV L + SV ++
Sbjct: 118 RLVTSAFLHFSVTHIAFNMLALYFVGPPLEHALGRLRFVALYLLSALGGSV-------LV 170
Query: 131 YLMNHDVTELYQCAIGFSAVLFSMKTIRTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLM 190
YL+ + L A G LF + R+ LN V +V A + +
Sbjct: 171 YLLTFN--ALTAGASGAVFGLFGATFVVGRK--------LNMDVRSVLAIIGLNLAFTFL 220
Query: 191 VP-----NASFKGHLSGILVG 206
+P N S++GH+ G++ G
Sbjct: 221 IPLFTSQNISWQGHIGGLVTG 241
>gi|374600021|ref|ZP_09673023.1| Rhomboid family protein [Myroides odoratus DSM 2801]
gi|423325184|ref|ZP_17303025.1| hypothetical protein HMPREF9716_02382 [Myroides odoratimimus CIP
103059]
gi|373911491|gb|EHQ43340.1| Rhomboid family protein [Myroides odoratus DSM 2801]
gi|404607193|gb|EKB06727.1| hypothetical protein HMPREF9716_02382 [Myroides odoratimimus CIP
103059]
Length = 249
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 12/126 (9%)
Query: 79 HGDDMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVT 138
HG MH+++NM +L G LE +FG+ + VL FLI + + Y +++ V+
Sbjct: 53 HGGIMHIFFNMFALFSFGSTLEMIFGTKRLYVL--FLISGLGAALLHMGVNYYSVSNGVS 110
Query: 139 ELYQCAIGFSAVLFSMKT-IRTRQ------SPDVTHQLLNFSVPAVYAP---WIELVIIH 188
+L S V +K+ + R+ S D + F+ P V A + LV
Sbjct: 111 QLVAAGFPESEVYNLLKSGMYDRRWESHLSSADFGAMISAFNTPVVGASGAVYGFLVAFA 170
Query: 189 LMVPNA 194
M PNA
Sbjct: 171 YMFPNA 176
>gi|308805669|ref|XP_003080146.1| unnamed protein product [Ostreococcus tauri]
gi|116058606|emb|CAL54313.1| unnamed protein product [Ostreococcus tauri]
Length = 289
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 17/170 (10%)
Query: 70 KRLVLSALEHGDDMHLYYNMVSLIVKGRELE-RMFGSVQ-----FVVLVSFLIISTSVCY 123
K VL+ H +D H YN SL K E E R+ SV L++
Sbjct: 61 KTCVLATCAHYNDYHAVYNAGSLFAKMVETEKRVRASVTRDASAAATAAFALVLGGLANA 120
Query: 124 VMLSYVIYLMNHDVTELYQCAIGFSAVLFSMKTIRTRQ--SPDVTHQLLNFS---VPAVY 178
+ YL ++ +Q G S +LF++KT R R + V ++ F VPA
Sbjct: 121 TAVVSANYLFPDLASQCFQ---GSSGLLFALKTYRARADFAAGVRGRVSFFGFIDVPAEM 177
Query: 179 APWIELVIIHLMVPN-ASFKGHLSGILVGLCYT--ETSLGRLVERSGRSV 225
A E+ I++++ + A + SG +VGL E+S + R+ R V
Sbjct: 178 ASLAEIAILYMLDSSPAMLNVYASGAVVGLALASFESSAMNALARATRGV 227
>gi|403052072|ref|ZP_10906556.1| hypothetical protein AberL1_11122 [Acinetobacter bereziniae LMG
1003]
Length = 206
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 64 LNQRDYKRLVLSALEHGDDMHLYYNMVSLIVKGRELERMF 103
+ Y R + H D MHL++NM +L GR +E F
Sbjct: 39 IKHGQYDRFLTHGFIHNDGMHLFFNMFTLYFFGRNIEWFF 78
>gi|227890613|ref|ZP_04008418.1| S54 family peptidase [Lactobacillus salivarius ATCC 11741]
gi|417788071|ref|ZP_12435754.1| GlpG protein (membrane protein of glp regulon) [Lactobacillus
salivarius NIAS840]
gi|417810486|ref|ZP_12457165.1| S54 family peptidase [Lactobacillus salivarius GJ-24]
gi|418961160|ref|ZP_13513047.1| rhomboid family integral membrane protein [Lactobacillus salivarius
SMXD51]
gi|227867551|gb|EEJ74972.1| S54 family peptidase [Lactobacillus salivarius ATCC 11741]
gi|334308248|gb|EGL99234.1| GlpG protein (membrane protein of glp regulon) [Lactobacillus
salivarius NIAS840]
gi|335349282|gb|EGM50782.1| S54 family peptidase [Lactobacillus salivarius GJ-24]
gi|380344827|gb|EIA33173.1| rhomboid family integral membrane protein [Lactobacillus salivarius
SMXD51]
Length = 220
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 88/217 (40%), Gaps = 37/217 (17%)
Query: 28 PPGTLTLILIQTLLYIMNVLAQPWDSL------GICISAHTILNQRDYKRLVLSALEHGD 81
P T TLI++ ++YI+ L +++ G S + I Q Y RL+ H
Sbjct: 9 PSITYTLIILNIVMYIVMTLFGGTENIANLVRFGAKYSPYIINGQ--YWRLITPMFIHIG 66
Query: 82 DMHLYYNMVSLIVKGRELERMFGSVQFVVLVSFLIISTSVCYVMLSYVIYLMNHDVTELY 141
HL NM++L G LE +FG +F+++ + + +C + S+
Sbjct: 67 LQHLLINMITLYFLGTLLENIFGKTRFLIIY----LVSGICGNIASFAF--------NFS 114
Query: 142 QCAIGFSAVLFSMKTI------RTRQSPDVTHQLLNFSVPAVYAPWIELVIIHLMVPNAS 195
+ G S LF M R++P + F + + L I M N+
Sbjct: 115 SISAGASTALFGMFGSFLMLGESFRRNPYLQTMSRQFFLLVI------LNIFFGMFGNSD 168
Query: 196 FKGHL----SGILVGLCYTETSLGRLVERSGRSVSRV 228
GHL SG L+G +LGR V + R VS V
Sbjct: 169 LTGHLGGLVSGFLLGYVVGVPNLGR-VPKVKRIVSFV 204
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.326 0.139 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,961,991,544
Number of Sequences: 23463169
Number of extensions: 152060328
Number of successful extensions: 585774
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 905
Number of HSP's that attempted gapping in prelim test: 584448
Number of HSP's gapped (non-prelim): 1446
length of query: 275
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 135
effective length of database: 9,074,351,707
effective search space: 1225037480445
effective search space used: 1225037480445
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 76 (33.9 bits)