BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15810
(343 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q58DG1|MYG1_BOVIN UPF0160 protein MYG1, mitochondrial OS=Bos taurus PE=2 SV=1
Length = 381
Score = 301 bits (770), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 162/324 (50%), Positives = 215/324 (66%), Gaps = 9/324 (2%)
Query: 11 IGTHSGMFHCDEVLGCSMLKLL--YPDAEIIRTRDQKELDKLDLVLDVGGEYNPDKLRFD 68
IGTH+G FHCDE L C++L+LL Y +AEI+RTRD ++L D+V+DVGGEY+P + R+D
Sbjct: 47 IGTHNGTFHCDEALACALLRLLPEYREAEIVRTRDPEKLAACDIVVDVGGEYDPQRHRYD 106
Query: 69 HHQKTFNETFASVRKEDKFNKVKLSSAGLIYCHFGLDILKKLSPIQEE-YFLNKLFDKVY 127
HHQ++F ET +S+ + + KLSSAGLIY HFG +L +L EE + L+DK+Y
Sbjct: 107 HHQRSFTETMSSLSPGKPW-QTKLSSAGLIYLHFGHKLLAQLLGTSEEDGMVGTLYDKMY 165
Query: 128 DNLIQEVDGIDNGIPMFE-GEPIYHISTHLGARVSRLNPKWNDTKTVDEMELFKKAMAIT 186
+N ++EVD +DNGI +E GEP Y ++T L ARV+RLNP WN D FK+AM +
Sbjct: 166 ENFVEEVDAVDNGISQWEEGEPRYLLTTTLSARVARLNPTWNQPNQ-DTEAGFKRAMDLV 224
Query: 187 LEEFQDRIDYYCTQWWPARKLVLDAIKERFSLHESGKIIEL-KTPCPWKSHFFELEQEME 245
EEF R+D+Y W PAR LV +A+ +RF + SG+IIEL K CPWK H ++LE +
Sbjct: 225 REEFLQRLDFYQNSWLPARTLVEEALAKRFQVDPSGEIIELEKGGCPWKEHLYQLELGLS 284
Query: 246 LGDQIRFAIFPADDFNSTFRVQAVSLTEKSFVLRTPLYKTWMGLRDDDLSSVAGIPDCIF 305
I F I+ D +RVQ V SF R PL + W GLRD+ L ++GIP CIF
Sbjct: 285 PAGTIAFVIY--TDQAGQWRVQCVPKEPHSFQSRLPLLEPWRGLRDEALDQISGIPGCIF 342
Query: 306 AHANGFIGGNKTREGALQMALKTL 329
HA+GFIGG++TREGAL MA TL
Sbjct: 343 VHASGFIGGHRTREGALSMARATL 366
>sp|Q9JK81|MYG1_MOUSE UPF0160 protein MYG1, mitochondrial OS=Mus musculus GN=Myg1 PE=2
SV=1
Length = 380
Score = 300 bits (767), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 161/324 (49%), Positives = 213/324 (65%), Gaps = 9/324 (2%)
Query: 11 IGTHSGMFHCDEVLGCSMLKLL--YPDAEIIRTRDQKELDKLDLVLDVGGEYNPDKLRFD 68
IGTH+G FHCDE L C++L+LL Y +AEI+RTRD ++L D+V+DVGGEYNP R+D
Sbjct: 46 IGTHNGTFHCDEALACALLRLLPEYANAEIVRTRDPEKLASCDIVVDVGGEYNPQSHRYD 105
Query: 69 HHQKTFNETFASVRKEDKFNKVKLSSAGLIYCHFGLDILKKLSPIQEE-YFLNKLFDKVY 127
HHQ+TF ET +S+ + + KLSSAGL+Y HFG +L +L EE ++ ++DK+Y
Sbjct: 106 HHQRTFTETMSSLCPGKPW-QTKLSSAGLVYLHFGRKLLAQLLGTSEEDSVVDTIYDKMY 164
Query: 128 DNLIQEVDGIDNGIPMF-EGEPIYHISTHLGARVSRLNPKWNDTKTVDEMELFKKAMAIT 186
+N ++EVD +DNGI + EGEP Y ++T L ARV+RLNP WN D F++AM +
Sbjct: 165 ENFVEEVDAVDNGISQWAEGEPRYAMTTTLSARVARLNPTWNQPNQ-DTEAGFRRAMDLV 223
Query: 187 LEEFQDRIDYYCTQWWPARKLVLDAIKERFSLHESGKIIEL-KTPCPWKSHFFELEQEME 245
EEF R+++Y W PAR LV +A+ +RF + SG+I+EL K CPWK H + LE E+
Sbjct: 224 QEEFLQRLNFYQHSWLPARALVEEALAQRFKVDSSGEIVELAKGGCPWKEHLYHLESELS 283
Query: 246 LGDQIRFAIFPADDFNSTFRVQAVSLTEKSFVLRTPLYKTWMGLRDDDLSSVAGIPDCIF 305
I F I+ D +RVQ V SF R PL + W GLRD L V+GIP CIF
Sbjct: 284 PKVAITFVIY--TDQAGQWRVQCVPKEPHSFQSRLPLPEPWRGLRDKALDQVSGIPGCIF 341
Query: 306 AHANGFIGGNKTREGALQMALKTL 329
HA+GFIGG+ TREGAL MA TL
Sbjct: 342 VHASGFIGGHHTREGALNMARATL 365
>sp|Q641W2|MYG1_RAT UPF0160 protein MYG1, mitochondrial OS=Rattus norvegicus GN=Myg1
PE=1 SV=1
Length = 381
Score = 300 bits (767), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 162/324 (50%), Positives = 215/324 (66%), Gaps = 9/324 (2%)
Query: 11 IGTHSGMFHCDEVLGCSMLKLL--YPDAEIIRTRDQKELDKLDLVLDVGGEYNPDKLRFD 68
IGTH+G FHCDE L C++L+LL Y +AEI+RTRD ++L D+V+DVGGEYNP + R+D
Sbjct: 47 IGTHNGTFHCDEALACALLRLLPEYRNAEIVRTRDPEKLALCDIVVDVGGEYNPQRHRYD 106
Query: 69 HHQKTFNETFASVRKEDKFNKVKLSSAGLIYCHFGLDILKKLSPIQEE-YFLNKLFDKVY 127
HHQ+TF ET +S+ + + KLSSAGL+Y HFG +L +L EE ++ ++DK+Y
Sbjct: 107 HHQRTFTETMSSLCPGKPW-QTKLSSAGLVYLHFGHKLLAQLLGTSEEDSVVDTIYDKMY 165
Query: 128 DNLIQEVDGIDNGIPMF-EGEPIYHISTHLGARVSRLNPKWNDTKTVDEMELFKKAMAIT 186
+N ++EVD +DNGI + EGEP Y ++T L ARVSRLNP WN D F++AM +
Sbjct: 166 ENFVEEVDAVDNGISQWAEGEPRYALTTTLSARVSRLNPTWNQPDQ-DTEAGFRRAMDLV 224
Query: 187 LEEFQDRIDYYCTQWWPARKLVLDAIKERFSLHESGKIIEL-KTPCPWKSHFFELEQEME 245
EEF R+++Y W PAR LV +A+ +RF + SG+I+EL K CPWK H + LE E+
Sbjct: 225 QEEFLQRLNFYQHSWLPARALVEEALAQRFKVDSSGEIVELAKGGCPWKEHLYHLESELS 284
Query: 246 LGDQIRFAIFPADDFNSTFRVQAVSLTEKSFVLRTPLYKTWMGLRDDDLSSVAGIPDCIF 305
I F I+ D +RVQ V SF R PL + W GLRD+ L V+GIP CIF
Sbjct: 285 PTVAITFVIY--TDQAGQWRVQCVPKEPHSFQSRLPLPEPWRGLRDEALDQVSGIPGCIF 342
Query: 306 AHANGFIGGNKTREGALQMALKTL 329
HA+GFIGG+ TREGAL MA TL
Sbjct: 343 VHASGFIGGHHTREGALNMARATL 366
>sp|Q55G91|U160_DICDI UPF0160 protein OS=Dictyostelium discoideum GN=DDB_G0267768 PE=3
SV=1
Length = 329
Score = 297 bits (760), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 157/331 (47%), Positives = 214/331 (64%), Gaps = 16/331 (4%)
Query: 10 TIGTHSGMFHCDEVLGCSMLKLL--YPDAEIIRTRDQKELDKLDLVLDVGGEYNPDKLRF 67
TI THSG FH DE L C +LKLL Y D++IIR+RD+ ++K + +DVG YN +KLRF
Sbjct: 5 TICTHSGSFHADEALACYLLKLLPTYKDSKIIRSRDKSVIEKSTVAVDVGAVYNFEKLRF 64
Query: 68 DHHQKTFNETFASVRKEDKFNKVKLSSAGLIYCHFGLDILKKLSPIQEEYFLNKLFDKVY 127
DHHQ F ETF D + +KLSSAGLIY H+G DI+K+ + L+ K+Y
Sbjct: 65 DHHQSGFTETF------DDKHDIKLSSAGLIYKHYGKDIIKQRLDTNDS-ITELLYQKLY 117
Query: 128 DNLIQEVDGIDNGIPMFEGE--PIYHISTHLGARVSRLNPKWNDTKTVDEM--ELFKKAM 183
D++IQE+DG+DNG+ + + P Y + + ARV LN WN+ + DE+ + F+KAM
Sbjct: 118 DSMIQELDGVDNGVERYPSDIKPRYQSGSSISARVGHLNQGWNEPQD-DEIVNKQFEKAM 176
Query: 184 AITLEEFQDRIDYYCTQWWPARKLVLDAIKERFSLHESGKIIELKTPCPWKSHFFELEQE 243
+ + F DR+DYY W P R +V +A++ R H SG+I+ L CPWK H F LEQE
Sbjct: 177 ELMGQYFLDRLDYYGKSWLPCRSIVENALENRKQTHSSGEILILDMFCPWKDHLFSLEQE 236
Query: 244 MELGDQIRFAIFPADDFNSTFRVQAVSLTEKSFVLRTPLYKTWMGLRDDDLSSVAGIPDC 303
++ I+F +F +D + +RV AV + SF LR PL + W G RD++LS ++GI C
Sbjct: 237 KDIKTPIKFVLF--EDTSGQWRVSAVGINLHSFTLRLPLPEEWRGKRDEELSQISGIEGC 294
Query: 304 IFAHANGFIGGNKTREGALQMALKTLELAEK 334
+FAHANGFIGGNKTREGAL MA+KTL + K
Sbjct: 295 VFAHANGFIGGNKTREGALLMAIKTLNQSPK 325
>sp|Q9HB07|MYG1_HUMAN UPF0160 protein MYG1, mitochondrial OS=Homo sapiens GN=C12orf10
PE=1 SV=2
Length = 376
Score = 296 bits (758), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 162/324 (50%), Positives = 212/324 (65%), Gaps = 9/324 (2%)
Query: 11 IGTHSGMFHCDEVLGCSMLKLL--YPDAEIIRTRDQKELDKLDLVLDVGGEYNPDKLRFD 68
IGTH+G FHCDE L C++L+LL Y DAEI+RTRD ++L D+V+DVGGEY+P + R+D
Sbjct: 47 IGTHNGTFHCDEALACALLRLLPEYRDAEIVRTRDPEKLASCDIVVDVGGEYDPRRHRYD 106
Query: 69 HHQKTFNETFASVRKEDKFNKVKLSSAGLIYCHFGLDILKKLSPIQEE-YFLNKLFDKVY 127
HHQ++F ET +S+ K + KLSSAGLIY HFG +L +L EE + L+DK+Y
Sbjct: 107 HHQRSFTETMSSL-SPGKPWQTKLSSAGLIYLHFGHKLLAQLLGTSEEDSMVGTLYDKMY 165
Query: 128 DNLIQEVDGIDNGIPMF-EGEPIYHISTHLGARVSRLNPKWNDTKTVDEMELFKKAMAIT 186
+N ++EVD +DNGI + EGEP Y ++T L ARV+RLNP WN D FK+AM +
Sbjct: 166 ENFVEEVDAVDNGISQWAEGEPRYALTTTLSARVARLNPTWNHPDQ-DTEAGFKRAMDLV 224
Query: 187 LEEFQDRIDYYCTQWWPARKLVLDAIKERFSLHESGKIIEL-KTPCPWKSHFFELEQEME 245
EEF R+D+Y W PAR LV +A+ +RF + SG+I+EL K CPWK H + LE +
Sbjct: 225 QEEFLQRLDFYQHSWLPARALVEEALAQRFQVDPSGEIVELAKGACPWKEHLYHLESGLS 284
Query: 246 LGDQIRFAIFPADDFNSTFRVQAVSLTEKSFVLRTPLYKTWMGLRDDDLSSVAGIPDCIF 305
I F I+ D +R+Q V SF R PL + W GLRD+ L V+GIP CIF
Sbjct: 285 PPVAIFFVIY--TDQAGQWRIQCVPKEPHSFQSRLPLPEPWRGLRDEALDQVSGIPGCIF 342
Query: 306 AHANGFIGGNKTREGALQMALKTL 329
HA+GF GG+ TREGAL MA TL
Sbjct: 343 VHASGFTGGHHTREGALSMARATL 366
>sp|O17606|YK4P_CAEEL UPF0160 protein C27H6.8 OS=Caenorhabditis elegans GN=C27H6.8 PE=3
SV=2
Length = 340
Score = 283 bits (725), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/340 (42%), Positives = 212/340 (62%), Gaps = 12/340 (3%)
Query: 11 IGTHSGMFHCDEVLGCSMLKLL--YPDAEIIRTRDQKELDKLDLVLDVGGEYNPDKLRFD 68
IGTHSG FHCDE C MLK L + D I+RTRD +L+K D+++DVGG ++ K R+D
Sbjct: 5 IGTHSGKFHCDEAFACFMLKQLPQFKDHSILRTRDAAQLEKCDIIVDVGGIFDHSKQRYD 64
Query: 69 HHQKTFNETFASVRKEDKFN-KVKLSSAGLIYCHFGLDILKK-LSPIQEEYFLNKLFDKV 126
HHQ+ F +T +R +K N KLSSAGL+Y H+G +++ + L ++ + ++
Sbjct: 65 HHQRGFTDT---MRTLEKLNFDTKLSSAGLVYAHYGREVINQILGGNVSSSMIDLFYHRL 121
Query: 127 YDNLIQEVDGIDNGIPMFEGEPIYHISTHLGARVSRLNPKWNDTKTVDEMELFKKAMAIT 186
Y+ ++ +D IDNGI ++G P YH S +L +R + N WN+ + D E F++AM
Sbjct: 122 YEQFVESIDAIDNGISQYDGVPRYHSSGNLSSRTGQFNSHWNEPEN-DADERFQQAMQFI 180
Query: 187 LEEFQDRIDYYCTQWWPARKLVLDAIKERFSLHESGKIIELKTP-CPWKSHFFELEQEME 245
EEF + Y WWPAR+++ A+ +RF + SG+II ++ CPWK HFF++E E
Sbjct: 181 GEEFSRSVKYLANVWWPAREIIEAAVDKRFEIDASGRIILIENGGCPWKEHFFDIEVEKN 240
Query: 246 LGDQIRFAIFPADDFNSTFRVQAVSLTE-KSFVLRTPLYKTWMGLRDDDLSSVAGIPDCI 304
+ D I +D N+++RVQA+ + + SF R PL W GLRDDDLS +GIP +
Sbjct: 241 IADDNITYILFSDSTNASWRVQAIPVDKMSSFENRMPLPAAWRGLRDDDLSKESGIPGGV 300
Query: 305 FAHANGFIGGNKTREGALQMALKTLELAEKD--EKAEQSN 342
F H +GFIGGN TREGA+ MA K LE+ E++ +KA+ N
Sbjct: 301 FVHISGFIGGNLTREGAIAMARKALEIGEENPVKKAKLGN 340
>sp|Q9P7T6|YIW4_SCHPO UPF0160 protein C694.04c OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPAC694.04c PE=3 SV=1
Length = 324
Score = 235 bits (600), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 133/332 (40%), Positives = 198/332 (59%), Gaps = 24/332 (7%)
Query: 11 IGTHSGMFHCDEVLGCSMLKLL--YPDAEIIRTRDQKELDKLDLVLDVGGEYNPDKLRFD 68
I THSG FH DE L ML+ L + A+I+R+RD + LD D+++DVGG+Y+ K FD
Sbjct: 7 IATHSGTFHADEALAVYMLRRLDRFSGAQIVRSRDPQVLDSCDIIVDVGGKYDGIKY-FD 65
Query: 69 HHQKTFNETFASVRKEDKFNKVKLSSAGLIYCHFGLDILKKLSP---IQEEYFLNKLFDK 125
HHQ+ FN+TF+ K++ +LSSAGLIY HFG +++ + P I E+ L L++K
Sbjct: 66 HHQREFNDTFSP-----KYS-TRLSSAGLIYKHFGREVIHAVLPQLKINEQD-LETLYEK 118
Query: 126 VYDNLIQEVDGIDNGIPMFEG--EPIYHISTHLGARVSRLNPKWNDTKTVDE--MELFKK 181
VY + ++ +D DNGI + +P + + L VS P WN K D+ +E F+K
Sbjct: 119 VYQSFVEGLDANDNGISAYPAGLKPSFKAAMSLPEMVSSFLPAWNSEKQDDQTYLECFQK 178
Query: 182 AMAITLEEFQDRIDYYCTQWWPARKLVLDAIKERFSLHESGKIIELKTPCPWKSHFFELE 241
A + F +++Y W PA+ L +AI + + I+ + PWK H F++E
Sbjct: 179 ASDLMGTWFVRSVEHYALSWLPAKTLAREAILKA----KDSPILIVDQFFPWKGHLFDIE 234
Query: 242 QEMELGDQIRFAIFPADDFNSTFRVQAVSLTEKSFVLRTPLYKTWMGLRDDDLSSVAGIP 301
+E+ + +Q ++AI+ +RVQAVS+ SF R PL + W G+RD+ LS + GIP
Sbjct: 235 KELGIENQFKYAIYSD---GKAWRVQAVSIDPTSFTCRLPLPEPWRGIRDEKLSELTGIP 291
Query: 302 DCIFAHANGFIGGNKTREGALQMALKTLELAE 333
CIF HA+GFIGGN+T EGAL+MA K L+ +
Sbjct: 292 GCIFVHASGFIGGNQTFEGALEMARKALDFPQ 323
>sp|P40093|YEY6_YEAST UPF0160 protein YER156C OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YER156C PE=1 SV=1
Length = 338
Score = 222 bits (565), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/337 (40%), Positives = 192/337 (56%), Gaps = 22/337 (6%)
Query: 5 SRTVKTIGTHSGMFHCDEVLGCSMLKLL--YPDAEIIRTRDQKELDKLDLVLDVGGEYNP 62
S+ K I THSG FH DE L ML+LL + DA+++R+R+ K+ + D+++DVG +Y+
Sbjct: 11 SKMSKQICTHSGSFHADESLAVYMLRLLPEFKDAKLVRSRNPKDWEASDILVDVGAQYDG 70
Query: 63 DKLRFDHHQKTFNETFASVRKEDKFNKVKLSSAGLIYCHFGLDILKK-LSPIQEEYFLNK 121
K FDHHQ+ F ETF +K+ K KLSSAGLI+ H+G DI+K L+ L+
Sbjct: 71 VKF-FDHHQRGFFETF-----NEKY-KTKLSSAGLIFKHYGRDIIKTILNNKVSSSDLDL 123
Query: 122 LFDKVYDNLIQEVDGIDNGIPMF------EGEPIYH-ISTHLGARVSRLNPKWNDTKTVD 174
L+DKVY ++ +D DNGI + EP + + + +S +NP WN+ T D
Sbjct: 124 LYDKVYKQFVEALDANDNGISKYTIPKDSNLEPNFRDNAISIPGIISGMNPNWNED-TSD 182
Query: 175 EM--ELFKKAMAITLEEFQDRIDYYCTQWWPARKLVLDAIKERFSLHESGKIIELKTPCP 232
E F +A F + Y W PA+ LV AI ER + +SGKII L CP
Sbjct: 183 ESFDRCFARASEFIGGVFVTLVRGYGQSWLPAKALVAQAIDERMDVDKSGKIIVLPQFCP 242
Query: 233 WKSHFFELEQEMELGDQIRFAIFPADDFNSTFRVQAVSLTEKSFVLRTPLYKTWMGLRDD 292
WK H +ELE+E + QI F +F D + +RV V + SF R L + GLRD+
Sbjct: 243 WKEHLYELEREKNIEKQIEFVLFT--DSSGAWRVSTVPINSTSFQFRRGLPEPLRGLRDE 300
Query: 293 DLSSVAGIPDCIFAHANGFIGGNKTREGALQMALKTL 329
+LS+ +G+P CIF HA GFIGG K++E ++A +L
Sbjct: 301 ELSTKSGVPGCIFIHAAGFIGGAKSKEAVYELAKMSL 337
>sp|Q9PK08|Y665_CHLMU UPF0160 protein TC_0665 OS=Chlamydia muridarum (strain MoPn / Nigg)
GN=TC_0665 PE=3 SV=2
Length = 289
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 141/328 (42%), Gaps = 57/328 (17%)
Query: 9 KTIGTHSGMFHCDEVLGCSMLKL--LYPDAEIIRTRDQKELDKLDLVLDVGGEYNPDKLR 66
+++GTH G FH DEV C++L + L +IIRTRD ++L + + V DVGG Y+ R
Sbjct: 5 RSVGTHDGSFHADEVTACALLIMFDLVDKDKIIRTRDSEKLAQCEYVCDVGGRYSIADKR 64
Query: 67 FDHHQKTFNETFASVRKEDKFNKVKLSSAGLIYCHFGLDILKKLSPI-QEEY-FLNKLFD 124
FDHHQ ++ ++ SSAG++ LD L L + EEY +LN
Sbjct: 65 FDHHQVSYTGSW--------------SSAGMV-----LDYLHHLGSLPHEEYEYLNS--- 102
Query: 125 KVYDNLIQEVDGIDNGIPMFEGEPIYHISTHLGARVSRLNPKWNDTKTVDEMELFKKAMA 184
L+ VD DNG F E S + ++ + D+ F A
Sbjct: 103 ----TLVHGVDEQDNG-RFFSKEGFCSFSD-----IIKIYNPLEEGGNTDKEFFFALHFA 152
Query: 185 I-TLEEFQDRIDYYCTQWWPARKLVLDAIKERFSLHESGKIIELKTPCPWKSHFFELEQE 243
I L +++ Y ++ D +K+ + + + P W+ +FF L E
Sbjct: 153 IDLLTRLREKFRY--------DRICRDVVKQ--VMEKEDVCLRFDRPLAWQENFFSLGGE 202
Query: 244 MELGDQIRFAIFPADDFNSTFRVQAVSLT-EKSFVLRTPLYKTWMGLRDDDLSSVAGIPD 302
F FP D + ++ + T ++ +R P + W GL D L GIP
Sbjct: 203 ---NHPAAFVSFPCSD---QWILRGIPPTLDRRMEVRIPFPEDWAGLLGDQLVKATGIPG 256
Query: 303 CIFAHANGFIGGNKTREG---ALQMALK 327
IF H F+ +RE AL + LK
Sbjct: 257 AIFCHKGLFLSVWDSRESCEEALNLVLK 284
>sp|Q9Z862|Y489_CHLPN UPF0160 protein CPn_0489/CP_0265/CPj0489/CpB0509 OS=Chlamydia
pneumoniae GN=CPn_0489 PE=3 SV=2
Length = 290
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 143/326 (43%), Gaps = 56/326 (17%)
Query: 9 KTIGTHSGMFHCDEVLGCSMLKL--LYPDAEIIRTRDQKELDKLDLVLDVGGEYNPDKLR 66
++IGTH G FH DEV C++L + L + +IIR+RD L K + V DVGG Y+ + R
Sbjct: 5 RSIGTHDGSFHADEVTACALLIIFDLVDENKIIRSRDPVVLSKCEYVCDVGGVYSIENKR 64
Query: 67 FDHHQKTFNETFASVRKEDKFNKVKLSSAGLIYCHFGLDILKKLSPI--QEEYFLNKLFD 124
FDHHQ +++ ++ SSAG+I L LK+ + +E +FLN
Sbjct: 65 FDHHQVSYDGSW--------------SSAGMI-----LHYLKEFGYMDCEEYHFLN---- 101
Query: 125 KVYDNLIQEVDGIDNGIPMFEGEPIYHISTHLGARVSRLNPKWNDTKTVDEMELFKKAMA 184
+ L+ VD DNG F E S + NP+ + D F A+
Sbjct: 102 ---NTLVHGVDEQDNG-RFFSKEGFCSFSD----IIKIYNPREEEETNSDAD--FSCALH 151
Query: 185 ITLEEFQDRIDYYCTQWWPARKLVLDAIKE---RFSLHESGKIIELKTPCPWKSHFFELE 241
T ID+ C +K D + R ++ + P W+ +FF L
Sbjct: 152 FT-------IDFLCRL---RKKFQYDRVCRGIVREAMETEDMCLYFDRPLAWQENFFFLG 201
Query: 242 QEMELGDQIRFAIFPADDFNSTFRVQAVSLTEKSFVLRTPLYKTWMGLRDDDLSSVAGIP 301
E F FP+ D R +L ++ +R P + W GL +LS V+GIP
Sbjct: 202 GEKH---PAAFVCFPSCD-QWILRGIPPNL-DRRMEVRVPFPENWAGLLGKELSKVSGIP 256
Query: 302 DCIFAHANGFIGGNKTREGALQMALK 327
+F H F+ RE + Q AL+
Sbjct: 257 GAVFCHKGLFLSVWTNRE-SCQRALR 281
>sp|O84391|Y386_CHLTR UPF0160 protein CT_386 OS=Chlamydia trachomatis (strain D/UW-3/Cx)
GN=CT_386 PE=3 SV=2
Length = 289
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 143/331 (43%), Gaps = 53/331 (16%)
Query: 9 KTIGTHSGMFHCDEVLGCSMLKL--LYPDAEIIRTRDQKELDKLDLVLDVGGEYNPDKLR 66
+++GTH G FH DEV C++L + L + +I+RTRD ++L + + V DVGG Y+ + R
Sbjct: 5 RSVGTHDGSFHADEVTACALLIMFDLVDENKIVRTRDPQKLAQCEYVCDVGGRYSTEHKR 64
Query: 67 FDHHQKTFNETFASVRKEDKFNKVKLSSAGLIYCHFGLDILKKLSPIQEEYFLNKLFDKV 126
FDHHQ ++ ++ SSAG++ LD L L + + ++ +
Sbjct: 65 FDHHQVSYTGSW--------------SSAGMV-----LDYLHGLG-----FLSHDEYEYL 100
Query: 127 YDNLIQEVDGIDNGIPMFEGEPIYHISTHLGARVSRLNPKWNDTKTVDEMELFKKAMAI- 185
+ L+ VD DNG F E S + ++ + D+ F AI
Sbjct: 101 NNTLVHGVDEQDNG-RFFSKEGFCSFSD-----IIKIYNPLEEGGNTDKEFFFALRFAID 154
Query: 186 TLEEFQDRIDYYCTQWWPARKLVLDAIKERFSLHESGKIIELKTPCPWKSHFFELEQEME 245
L +++ Y ++ D +K+ + + + P W+ +FF L E
Sbjct: 155 LLTRLREKFCY--------DRVCRDIVKQ--VMEKESVCLRFDRPLAWQENFFSLGGE-- 202
Query: 246 LGDQIRFAIFPADDFNSTFRVQAVSLT-EKSFVLRTPLYKTWMGLRDDDLSSVAGIPDCI 304
F FP D + ++ + T ++ +R P + W GL D L GIP I
Sbjct: 203 -SHPAAFVSFPCSD---QWILRGIPPTLDRRMEVRIPFPEEWAGLLGDQLVQATGIPGAI 258
Query: 305 FAHANGFIG---GNKTREGALQMALKTLELA 332
F H F+ ++ E AL + LK L
Sbjct: 259 FCHKGLFLSVWDSQESCEEALNLVLKQQRLV 289
>sp|Q6LV38|LPTD_PHOPR LPS-assembly protein LptD OS=Photobacterium profundum GN=lptD PE=3
SV=1
Length = 788
Score = 35.4 bits (80), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 4 LSRTVKTIGTHSGMF--HCDEVLGCSMLKLLYPDAEIIRTRDQKELDKLDLVLDVGGEYN 61
+SRT+ T HSG++ + G + L P + + +D+ + + V D GG Y+
Sbjct: 480 VSRTIPTARIHSGLYLERDTSIWGQDYTQSLEPQIQYLYVQDKDQSGIYNPVNDDGGGYD 539
Query: 62 PDKLRFDHHQKTFNETFASV 81
+L+ D++ ++T++SV
Sbjct: 540 STRLQQDYYGLFSDKTYSSV 559
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,836,520
Number of Sequences: 539616
Number of extensions: 5532609
Number of successful extensions: 13069
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 12998
Number of HSP's gapped (non-prelim): 17
length of query: 343
length of database: 191,569,459
effective HSP length: 118
effective length of query: 225
effective length of database: 127,894,771
effective search space: 28776323475
effective search space used: 28776323475
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)