BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15811
(581 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242007818|ref|XP_002424718.1| Homocysteine S-methyltransferase, putative [Pediculus humanus
corporis]
gi|212508211|gb|EEB11980.1| Homocysteine S-methyltransferase, putative [Pediculus humanus
corporis]
Length = 312
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/316 (37%), Positives = 177/316 (56%), Gaps = 9/316 (2%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+K+LDG F++Q++R+ +DG PLWS+ +L T PEA + +H DF++ E + Y
Sbjct: 4 IKVLDGGFSTQLARYVGDIIDGDPLWSARFLYTNPEAVINSHLDFLKAGAEIIIT-NSYQ 62
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
+ EY G D DLI + +V RA YL P A S+GPYG
Sbjct: 63 ASISGFKEYLG--CDETEGYDLI---KSSVRFAKRARDLYLE-TNPGARPLIAGSVGPYG 116
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
L DGSEY+G Y+D + + +++WHRP + L+ GVD LA ETIPA KE L++LL+
Sbjct: 117 ASLHDGSEYTGEYMDKVDKDAIMSWHRPRITGLIEEGVDLLAFETIPAFKEGEFLLELLK 176
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 504
EFP QKAWLSF CK+ HT+ GE + C N +Q+ A+G NC+ P +VS L + I
Sbjct: 177 EFPKQKAWLSFQCKNSEHTAKGENFQEVIKKCWSMNKEQLVAVGCNCLSPKYVSKLFKGI 236
Query: 505 KQSHP-TVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
++ + IVYPN G + ++ W E +++ +W + GV IGGCC +
Sbjct: 237 NENRTDKIPLIVYPNSGEEYIP-NIGWFGNEKLFNMNKLFGEWFDYGVKYIGGCCRTNAD 295
Query: 564 EIQQMRIMIDEFNTKK 579
+++ + + ++N KK
Sbjct: 296 DVKNISNAVKQWNLKK 311
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/261 (42%), Positives = 161/261 (61%), Gaps = 12/261 (4%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K+K+LDG F++Q++R+ +DG PLWS+ +L T PEA + +H DF++AGA+II ++ YQ
Sbjct: 3 KIKVLDGGFSTQLARYVGDIIDGDPLWSARFLYTNPEAVINSHLDFLKAGAEIIITNSYQ 62
Query: 66 ANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
A++ + LG E E DL+ SV+ A+D +T N L A S+
Sbjct: 63 ASISGFKEYLGCDETEGYDLIKSSVRFAKRARDLYLET-----NPGARPLI-----AGSV 112
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSEY+G Y+D + + +++WHRP + L+ GVD LA ETIPA KE L+
Sbjct: 113 GPYGASLHDGSEYTGEYMDKVDKDAIMSWHRPRITGLIEEGVDLLAFETIPAFKEGEFLL 172
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
+LL+EFP QKAWLSF CK+ HT+ GE + C N +Q+ A+G NC+ P +VS L
Sbjct: 173 ELLKEFPKQKAWLSFQCKNSEHTAKGENFQEVIKKCWSMNKEQLVAVGCNCLSPKYVSKL 232
Query: 245 VRCIKQSHP-TVQTIVYPNKG 264
+ I ++ + IVYPN G
Sbjct: 233 FKGINENRTDKIPLIVYPNSG 253
>gi|307193337|gb|EFN76199.1| Homocysteine S-methyltransferase 2 [Harpegnathos saltator]
Length = 323
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/264 (47%), Positives = 165/264 (62%), Gaps = 14/264 (5%)
Query: 8 KLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQAN 67
K+LDG F+SQ+SRH D PLW++ +L T P A TH D++RAGA+II+++ YQA+
Sbjct: 6 KVLDGGFSSQLSRHVGAKFDDDPLWTARFLQTNPSAVYNTHLDYLRAGAEIIETNTYQAS 65
Query: 68 VDNLTK-LGYSEQEALDLLHKSVQLMNSA---KDKENQTPDINLNKTFNLLTGHIETAAS 123
V L K L S E+L LL K+V+L A KEN T D + A S
Sbjct: 66 VPGLMKYLNISMDESLALLAKAVELAKQAVVTYMKENTTNDKQGGE-------KPLVAGS 118
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
GPYG L D SEY+G Y SM+ +L+ WHRP ++AL+ AGVD LALETIP +EA AL
Sbjct: 119 CGPYGACLHDKSEYTGAYGKSMSRQELMDWHRPRIQALLDAGVDLLALETIPYAEEADAL 178
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
V+LLREFP +AWLSFSC+DD H + G C A P+Q+ A+GVNCV P++V T
Sbjct: 179 VELLREFPRARAWLSFSCRDDRHIADGSDFREVAVRCYRALPEQVVAVGVNCVPPNYVKT 238
Query: 244 LVRCI---KQSHPTVQTIVYPNKG 264
L++ I ++S + IVYPN+G
Sbjct: 239 LLQGINKEERSQDFIPLIVYPNRG 262
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/321 (38%), Positives = 178/321 (55%), Gaps = 23/321 (7%)
Query: 266 KLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIE---------T 316
K+LDG F+SQ+SRH D PLW++ +L T P A TH D++R E +
Sbjct: 6 KVLDGGFSSQLSRHVGAKFDDDPLWTARFLQTNPSAVYNTHLDYLRAGAEIIETNTYQAS 65
Query: 317 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT 376
+ Y + D S + + ++ + + N + G KP +
Sbjct: 66 VPGLMKYLNISMDESLALLAKAVELAKQAVVTYMKENTTNDKQGGE------KPLV---- 115
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S GPYG L D SEY+G Y SM+ +L+ WHRP ++AL+ AGVD LALETIP +EA
Sbjct: 116 AGSCGPYGACLHDKSEYTGAYGKSMSRQELMDWHRPRIQALLDAGVDLLALETIPYAEEA 175
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
ALV+LLREFP +AWLSFSC+DD H + G C A P+Q+ A+GVNCV P++
Sbjct: 176 DALVELLREFPRARAWLSFSCRDDRHIADGSDFREVAVRCYRALPEQVVAVGVNCVPPNY 235
Query: 497 VSTLVRCI---KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNI 553
V TL++ I ++S + IVYPN+GG + +W+ D+ I V WL+ GV
Sbjct: 236 VKTLLQGINKEERSQDFIPLIVYPNRGGCYSETD-EWIPVPDDQRINLPVLDWLDLGVRY 294
Query: 554 IGGCCEVTSYEIQQMRIMIDE 574
IGGCC+V + +I +R +++
Sbjct: 295 IGGCCKVFAEDIGAIRSLVNR 315
>gi|389611259|dbj|BAM19241.1| 5-methyltetrahydrofolate [Papilio polytes]
Length = 343
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 122/270 (45%), Positives = 161/270 (59%), Gaps = 20/270 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ +LDG F++Q+S H +DG PLWS+ +L T P V TH DF+RAGA +I ++ YQ
Sbjct: 13 QIVVLDGGFSTQLSCHVGHVIDGDPLWSARFLHTHPNEVVNTHLDFLRAGAHLIITNTYQ 72
Query: 66 ANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIE----- 119
A+VD + LG S ++ +L+ ++V+L A LN G I+
Sbjct: 73 ASVDGFVEHLGVSPEQGYELIVRAVELAKRA-----------LNLYLEEYRGCIQDDHVP 121
Query: 120 -TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 178
S+GPYG L DGSEY G Y D+ T + WHRP ++ALV AGVD LALETIP ++
Sbjct: 122 LVVGSVGPYGAHLHDGSEYDGSYADTTTVQTMREWHRPRIQALVEAGVDLLALETIPCQE 181
Query: 179 EALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 238
EA L LLREFP KAWL+FSCKD+ +HGE C ANPDQ+ A+GVNC P
Sbjct: 182 EAEMLCDLLREFPNVKAWLAFSCKDNQSIAHGESFQKVAKKCWEANPDQLVAVGVNCCAP 241
Query: 239 SHVSTLVRCIKQSHP--TVQTIVYPNKGVK 266
S+VSTL++ I P + IVYPN G K
Sbjct: 242 SYVSTLLKGINDDRPHDPIPLIVYPNSGEK 271
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/333 (38%), Positives = 182/333 (54%), Gaps = 14/333 (4%)
Query: 253 PTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRG 312
P+ + V P + + +LDG F++Q+S H +DG PLWS+ +L T P V TH DF+R
Sbjct: 3 PSTEEGVEPPQ-IVVLDGGFSTQLSCHVGHVIDGDPLWSARFLHTHPNEVVNTHLDFLRA 61
Query: 313 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSI 372
+ Y + E+ G + E + A VE RA YL + I
Sbjct: 62 GAHLIIT-NTYQASVDGFVEHLGVSPEQGYELIVRA-----VELAKRALNLYLEEYRGCI 115
Query: 373 SSQ----TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE 428
S+GPYG L DGSEY G Y D+ T + WHRP ++ALV AGVD LALE
Sbjct: 116 QDDHVPLVVGSVGPYGAHLHDGSEYDGSYADTTTVQTMREWHRPRIQALVEAGVDLLALE 175
Query: 429 TIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIG 488
TIP ++EA L LLREFP KAWL+FSCKD+ +HGE C ANPDQ+ A+G
Sbjct: 176 TIPCQEEAEMLCDLLREFPNVKAWLAFSCKDNQSIAHGESFQKVAKKCWEANPDQLVAVG 235
Query: 489 VNCVRPSHVSTLVRCIKQSHP--TVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQW 546
VNC PS+VSTL++ I P + IVYPN G ++ + W+D + ++ ++ +W
Sbjct: 236 VNCCAPSYVSTLLKGINDDRPHDPIPLIVYPNSGEKYNP-QIGWIDRDKCEAVEVFIQEW 294
Query: 547 LEEGVNIIGGCCEVTSYEIQQMRIMIDEFNTKK 579
L+ GV +GGCC + ++ ++R + + ++
Sbjct: 295 LDLGVRYVGGCCRTYATDVSRIRNQVHCWRDRR 327
>gi|389612076|dbj|BAM19564.1| 5-methyltetrahydrofolate, partial [Papilio xuthus]
Length = 285
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 119/270 (44%), Positives = 160/270 (59%), Gaps = 20/270 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ +LDG F++Q+S H +DG PLWS+ +L T P V TH DF+RAGA +I ++ YQ
Sbjct: 13 QIVVLDGGFSTQLSCHVGHVIDGDPLWSARFLHTHPNEVVNTHLDFLRAGAHLIITNTYQ 72
Query: 66 ANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIE----- 119
A+VD + L S ++ +L+ ++V+L A+ +G I+
Sbjct: 73 ASVDGFVEHLSVSPEQGYELIVRAVELAKRAR-----------TLYLEEFSGCIQDDHVP 121
Query: 120 -TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 178
S+GPYG L DGSEY G Y D+ T + WHRP ++ALV AGVD LALETIP ++
Sbjct: 122 LVVGSVGPYGAHLHDGSEYDGSYADTTTVQTMREWHRPRIQALVEAGVDLLALETIPCQE 181
Query: 179 EALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 238
EA L LLREFP KAWL+FSCKD+ +HGE C ANPDQ+ A+GVNC P
Sbjct: 182 EAEMLCDLLREFPNVKAWLAFSCKDNQSIAHGESFQKVAKKCWEANPDQLVAVGVNCCAP 241
Query: 239 SHVSTLVRCIKQSHP--TVQTIVYPNKGVK 266
S+VSTL++ I P + IVYPN G K
Sbjct: 242 SYVSTLLKGINDDRPHDPIPLIVYPNSGEK 271
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 158/289 (54%), Gaps = 16/289 (5%)
Query: 253 PTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRG 312
P+ + V P + + +LDG F++Q+S H +DG PLWS+ +L T P V TH DF+R
Sbjct: 3 PSTEDGVEPPQ-IVVLDGGFSTQLSCHVGHVIDGDPLWSARFLHTHPNEVVNTHLDFLRA 61
Query: 313 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEA-DLIAWHRPNVEALVRAGVDYLALIKPS 371
+ +V DG + H S + +LI VE RA YL
Sbjct: 62 GAHLIITNTYQASV--DG--FVEHLSVSPEQGYELIVR---AVELAKRARTLYLEEFSGC 114
Query: 372 ISSQ----TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
I S+GPYG L DGSEY G Y D+ T + WHRP ++ALV AGVD LAL
Sbjct: 115 IQDDHVPLVVGSVGPYGAHLHDGSEYDGSYADTTTVQTMREWHRPRIQALVEAGVDLLAL 174
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ETIP ++EA L LLREFP KAWL+FSCKD+ +HGE C ANPDQ+ A+
Sbjct: 175 ETIPCQEEAEMLCDLLREFPNVKAWLAFSCKDNQSIAHGESFQKVAKKCWEANPDQLVAV 234
Query: 488 GVNCVRPSHVSTLVRCIKQSHP--TVQTIVYPNKGGVWDSVHMKWLDTE 534
GVNC PS+VSTL++ I P + IVYPN G ++ + W+D +
Sbjct: 235 GVNCCAPSYVSTLLKGINDDRPHDPIPLIVYPNSGEKYNP-QIGWIDRD 282
>gi|383862151|ref|XP_003706547.1| PREDICTED: homocysteine S-methyltransferase ybgG-like [Megachile
rotundata]
Length = 319
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/264 (44%), Positives = 169/264 (64%), Gaps = 10/264 (3%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+VK+LDG F++Q++ H +DG PLW++ +L T PEA V TH DF++AGADII ++ YQ
Sbjct: 4 QVKILDGGFSTQLATHVNDTIDGDPLWTARFLVTNPEAIVATHLDFLKAGADIILTNSYQ 63
Query: 66 ANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
A++D +K + +E+E+L+L KSV+ A + + D+ K ++ + A SI
Sbjct: 64 ASIDGFSKYMNMTEEESLNLFSKSVEYAKEAVNLFKK--DV---KNLKNVSENPLIAGSI 118
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSEY+G Y +TE L+ WHRP + L+ +GVD LA+ETIP +KEA ALV
Sbjct: 119 GPYGACLHDGSEYTGKYCSLVTEEILMDWHRPRIRQLIASGVDLLAIETIPCKKEAEALV 178
Query: 185 KLLREFPGQKAWLSFSCKDD-THTSHGELISSAVTSCLL-ANPDQIQAIGVNCVRPSHVS 242
KLL+EFP KAWLSFSC++D + + G + C A QI A+G+NC+ P +VS
Sbjct: 179 KLLKEFPNIKAWLSFSCRNDGENIADGSNFQNVAMQCYKEALQGQILAVGMNCIAPQNVS 238
Query: 243 TLVRCIKQSHP--TVQTIVYPNKG 264
L+R I ++ V +VYPN G
Sbjct: 239 PLLRGINANNKQEIVPLVVYPNSG 262
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/313 (39%), Positives = 179/313 (57%), Gaps = 15/313 (4%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
VK+LDG F++Q++ H +DG PLW++ +L T PEA V TH DF++ + + Y
Sbjct: 5 VKILDGGFSTQLATHVNDTIDGDPLWTARFLVTNPEAIVATHLDFLKAGADIILT-NSYQ 63
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVE----ALVRAGVDYLALIKPSISSQTAASI 380
+ S+Y +MTE + + +VE A+ D L S + A SI
Sbjct: 64 ASIDGFSKYM-----NMTEEESLNLFSKSVEYAKEAVNLFKKDVKNLKNVSENPLIAGSI 118
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GPYG L DGSEY+G Y +TE L+ WHRP + L+ +GVD LA+ETIP +KEA ALV
Sbjct: 119 GPYGACLHDGSEYTGKYCSLVTEEILMDWHRPRIRQLIASGVDLLAIETIPCKKEAEALV 178
Query: 441 KLLREFPGQKAWLSFSCKDD-THTSHGELISSAVTSCLL-ANPDQIQAIGVNCVRPSHVS 498
KLL+EFP KAWLSFSC++D + + G + C A QI A+G+NC+ P +VS
Sbjct: 179 KLLKEFPNIKAWLSFSCRNDGENIADGSNFQNVAMQCYKEALQGQILAVGMNCIAPQNVS 238
Query: 499 TLVRCIKQSHP--TVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556
L+R I ++ V +VYPN G + +V W+ T D S+ ++ +WL GV IGG
Sbjct: 239 PLLRGINANNKQEIVPLVVYPNSGETY-TVETGWMKTNDSCSLNQFIHEWLNLGVRYIGG 297
Query: 557 CCEVTSYEIQQMR 569
CC + ++ ++R
Sbjct: 298 CCRTHAEDVVKIR 310
>gi|114052514|ref|NP_001040249.1| homocysteine S-methyltransferase [Bombyx mori]
gi|87248513|gb|ABD36309.1| homocysteine S-methyltransferase [Bombyx mori]
Length = 325
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 115/263 (43%), Positives = 165/263 (62%), Gaps = 13/263 (4%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG F++Q++ H DG PL S+ +L T P+ + TH DF+RAG+DII+++ YQA
Sbjct: 11 VFVLDGGFSTQLTCHAGHTADGDPLGSARFLKTHPQDVINTHLDFLRAGSDIIETNTYQA 70
Query: 67 NVDNLTK-LGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAA 122
+VD L K L + +E+ +L+ +V+ +A+D +E Q +++ K A
Sbjct: 71 SVDGLVKHLNLTVEESYELIKSAVEFARTARDLYLQECQESNLSGRKPL--------IAG 122
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
S+GPYG L D SEY+G+Y D+ T+ + WHR ++ALV AGVD LA ETIP +KEA A
Sbjct: 123 SVGPYGAYLHDTSEYTGNYADNTTKETIKNWHRTRIQALVEAGVDILAFETIPCQKEAEA 182
Query: 183 LVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
LV++L+E+P KAWLSFSCK++T +HGE + C +NPDQ+ AIGVN P V+
Sbjct: 183 LVEILKEYPNMKAWLSFSCKNETSLAHGENFQNVAKKCWKSNPDQLIAIGVNGCSPKIVT 242
Query: 243 TLVRCIKQSHPT-VQTIVYPNKG 264
L + I T +Q I YPN G
Sbjct: 243 ELFKDINNDQETSIQYITYPNSG 265
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/325 (40%), Positives = 178/325 (54%), Gaps = 17/325 (5%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IET--- 316
K V +LDG F++Q++ H DG PL S+ +L T P+ + TH DF+R IET
Sbjct: 9 KTVFVLDGGFSTQLTCHAGHTADGDPLGSARFLKTHPQDVINTHLDFLRAGSDIIETNTY 68
Query: 317 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT 376
AS+ L E S + S E A L L+ KP I
Sbjct: 69 QASVDGLVKHLNLTVEESYELIKSAVEFARTARDL----YLQECQESNLSGRKPLI---- 120
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S+GPYG L D SEY+G+Y D+ T+ + WHR ++ALV AGVD LA ETIP +KEA
Sbjct: 121 AGSVGPYGAYLHDTSEYTGNYADNTTKETIKNWHRTRIQALVEAGVDILAFETIPCQKEA 180
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
ALV++L+E+P KAWLSFSCK++T +HGE + C +NPDQ+ AIGVN P
Sbjct: 181 EALVEILKEYPNMKAWLSFSCKNETSLAHGENFQNVAKKCWKSNPDQLIAIGVNGCSPKI 240
Query: 497 VSTLVRCIKQSHPT-VQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
V+ L + I T +Q I YPN G +D + W +++ S+ + V +WL+ GV IG
Sbjct: 241 VTELFKDINNDQETSIQYITYPNSGETYDH-KLGWTESDKCESLHNLVAEWLDLGVRYIG 299
Query: 556 GCCEVTSYEIQQMRIMIDEFNTKKN 580
GCC +I ++RI D KKN
Sbjct: 300 GCCRTNDVDISRIRIETD-LGLKKN 323
>gi|322800889|gb|EFZ21732.1| hypothetical protein SINV_01371 [Solenopsis invicta]
Length = 318
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 118/269 (43%), Positives = 172/269 (63%), Gaps = 11/269 (4%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K+++LDG F++Q+S H + +DG PLW++ +L T+P+A TH DF+RAGADII+++ YQ
Sbjct: 3 KIRVLDGGFSTQLSTHVGEKIDGDPLWTARFLITDPKAVFATHLDFLRAGADIIETNTYQ 62
Query: 66 ANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKEN-QTPDINLNKTFNLLTGHIETAAS 123
A +D K LG S++E+L+++ K+V + AKD N + +I N+ N+ A S
Sbjct: 63 ATIDGFVKHLGISKEESLEIIRKAV---DYAKDAVNVYSKEIEGNE--NVKNRKPLIAGS 117
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
GPYG L DGSEY+G Y +++ LI WHRP + AL+ GVD LA+ETIP +EA A+
Sbjct: 118 CGPYGACLHDGSEYTGSYCINVSREFLIDWHRPRIRALLEKGVDLLAIETIPCVREAEAV 177
Query: 184 VKLLREFPGQKAWLSFSCKDDTHT-SHGELISSAVTSCLL-ANPDQIQAIGVNCVRPSHV 241
+ LL+EFP +AWLSFSC+DD + + G C A P QI AIG+NC+ P V
Sbjct: 178 IDLLKEFPDTQAWLSFSCRDDGKSLADGSNFQEIAVRCYKNALPGQILAIGINCIAPQFV 237
Query: 242 STLVRCIK--QSHPTVQTIVYPNKGVKLL 268
+TL++ I +S + +VYPN G K +
Sbjct: 238 TTLLQDINKGKSDDLIPLVVYPNSGEKYI 266
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/323 (38%), Positives = 183/323 (56%), Gaps = 18/323 (5%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IET---AA 318
+++LDG F++Q+S H + +DG PLW++ +L T+P+A TH DF+R IET A
Sbjct: 4 IRVLDGGFSTQLSTHVGEKIDGDPLWTARFLITDPKAVFATHLDFLRAGADIIETNTYQA 63
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAA 378
+I + L E S ++ + +A A NV + G + + KP I A
Sbjct: 64 TIDGFVKHLGISKEES---LEIIRKAVDYAKDAVNVYSKEIEGNENVKNRKPLI----AG 116
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S GPYG L DGSEY+G Y +++ LI WHRP + AL+ GVD LA+ETIP +EA A
Sbjct: 117 SCGPYGACLHDGSEYTGSYCINVSREFLIDWHRPRIRALLEKGVDLLAIETIPCVREAEA 176
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHT-SHGELISSAVTSCLL-ANPDQIQAIGVNCVRPSH 496
++ LL+EFP +AWLSFSC+DD + + G C A P QI AIG+NC+ P
Sbjct: 177 VIDLLKEFPDTQAWLSFSCRDDGKSLADGSNFQEIAVRCYKNALPGQILAIGINCIAPQF 236
Query: 497 VSTLVRCIK--QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554
V+TL++ I +S + +VYPN G + V W + S+ ++ +WL+ GV I
Sbjct: 237 VTTLLQDINKGKSDDLIPLVVYPNSGEKY-IVSEGWKKEGESASLHEFIDEWLDFGVRYI 295
Query: 555 GGCCEVTSYEIQQMRIMIDEFNT 577
GGCC + +I+Q+R +D+ T
Sbjct: 296 GGCCRTYATDIKQIRSKVDQQRT 318
>gi|322800888|gb|EFZ21731.1| hypothetical protein SINV_00334 [Solenopsis invicta]
Length = 322
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 164/263 (62%), Gaps = 12/263 (4%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
VK+LDG F+ Q+SRH +DG PLW++ +L T A TH DF+RAGADII+++ YQA
Sbjct: 7 VKILDGGFSGQLSRHVGTKIDGDPLWTARFLKTNVNAVHTTHLDFLRAGADIIETNTYQA 66
Query: 67 NVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
++ + + L SE+E+LDL +V L A ++ + I+ + + A S G
Sbjct: 67 SLPGMMRYLNTSERESLDLFTTAVSLAKRAVEEYAREKHISPEQRPLI-------AGSCG 119
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L + SEY+G Y +M++ +L+ WHRP V+AL+ AGVD LALETIP KEA AL+K
Sbjct: 120 PYGAYLHNASEYTGSYGKNMSQQELMDWHRPRVKALLDAGVDLLALETIPCIKEAEALLK 179
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
LL+E+P +AWLSFSC+DD S G + C P QI A+GVNC+ P HV+ L+
Sbjct: 180 LLKEYPHARAWLSFSCRDDKFISDGSVFQEMAVHCYRTLPLQIIAVGVNCIDPRHVTPLL 239
Query: 246 RCIKQSHPTVQ----TIVYPNKG 264
+ I + + Q +VYPN+G
Sbjct: 240 KNINANALSKQDFIPLVVYPNRG 262
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/321 (38%), Positives = 179/321 (55%), Gaps = 15/321 (4%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIG 321
VK+LDG F+ Q+SRH +DG PLW++ +L T A TH DF+R IET
Sbjct: 7 VKILDGGFSGQLSRHVGTKIDGDPLWTARFLKTNVNAVHTTHLDFLRAGADIIETNTYQA 66
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
++R + +D T A ++ + VE R I P A S G
Sbjct: 67 SLPGMMRYLNTSERESLDLFTTA--VSLAKRAVEEYARE-----KHISPEQRPLIAGSCG 119
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG L + SEY+G Y +M++ +L+ WHRP V+AL+ AGVD LALETIP KEA AL+K
Sbjct: 120 PYGAYLHNASEYTGSYGKNMSQQELMDWHRPRVKALLDAGVDLLALETIPCIKEAEALLK 179
Query: 442 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
LL+E+P +AWLSFSC+DD S G + C P QI A+GVNC+ P HV+ L+
Sbjct: 180 LLKEYPHARAWLSFSCRDDKFISDGSVFQEMAVHCYRTLPLQIIAVGVNCIDPRHVTPLL 239
Query: 502 RCIKQSHPTVQ----TIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
+ I + + Q +VYPN+GG S +W D++S+ + +WL+ GV IGGC
Sbjct: 240 KNINANALSKQDFIPLVVYPNRGGSC-SATGEWTAVPDDHSLNLPISEWLDLGVRYIGGC 298
Query: 558 CEVTSYEIQQMRIMIDEFNTK 578
C++ + +I+ +R + + +
Sbjct: 299 CKIFAEDIKTIRSEVIRYQAR 319
>gi|307193338|gb|EFN76200.1| Homocysteine S-methyltransferase [Harpegnathos saltator]
Length = 321
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/272 (42%), Positives = 170/272 (62%), Gaps = 15/272 (5%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K+K+LDG F++Q+S H +DG PLW++ +L T+P A TH DF+RAGADIIQ++ YQ
Sbjct: 3 KIKVLDGGFSTQLSTHVGDRIDGDPLWTARFLITDPNAVFATHLDFLRAGADIIQTNTYQ 62
Query: 66 ANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETA 121
A +D K +G SE+E+L+++ ++V +A + KE + +++ L+ G
Sbjct: 63 ATIDGFVKYVGISEEESLEIIRRAVDYAKNAVNAYTKEIADDESIMSRNKPLIAG----- 117
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
S GPYG DGSEY+G Y +++ LI WHRP V AL+ GV LA+ETIP E+EA
Sbjct: 118 -SCGPYGACQHDGSEYTGSYGTRVSKEFLINWHRPRVRALLEEGVSLLAIETIPCEREAD 176
Query: 182 ALVKLLREFPGQKAWLSFSCKDD-THTSHGELISSAVTSCLL-ANPDQIQAIGVNCVRPS 239
A+V+LL+EFP +AWLSFSC+DD + + G C A P QI A+GVNC+ P
Sbjct: 177 AVVELLKEFPDARAWLSFSCRDDGKNLADGTSFRETAVRCYKNALPGQIIAVGVNCIAPQ 236
Query: 240 HVSTLVRCIKQSHPT---VQTIVYPNKGVKLL 268
HV++L++ + + + + +VYPN G K L
Sbjct: 237 HVTSLLKGVNKGNTDDNLIPLVVYPNSGEKYL 268
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 114/319 (35%), Positives = 177/319 (55%), Gaps = 16/319 (5%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+K+LDG F++Q+S H +DG PLW++ +L T+P A TH DF+R + + Y
Sbjct: 4 IKVLDGGFSTQLSTHVGDRIDGDPLWTARFLITDPNAVFATHLDFLRAGADIIQT-NTYQ 62
Query: 325 TVLRDGSEYSGHYVDSMTE--ADLIAWHRPNVEALVRAGVDYLALI---KPSISSQTAAS 379
+ +Y G + E + + + V A + D +++ KP I A S
Sbjct: 63 ATIDGFVKYVGISEEESLEIIRRAVDYAKNAVNAYTKEIADDESIMSRNKPLI----AGS 118
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
GPYG DGSEY+G Y +++ LI WHRP V AL+ GV LA+ETIP E+EA A+
Sbjct: 119 CGPYGACQHDGSEYTGSYGTRVSKEFLINWHRPRVRALLEEGVSLLAIETIPCEREADAV 178
Query: 440 VKLLREFPGQKAWLSFSCKDD-THTSHGELISSAVTSCLL-ANPDQIQAIGVNCVRPSHV 497
V+LL+EFP +AWLSFSC+DD + + G C A P QI A+GVNC+ P HV
Sbjct: 179 VELLKEFPDARAWLSFSCRDDGKNLADGTSFRETAVRCYKNALPGQIIAVGVNCIAPQHV 238
Query: 498 STLVRCIKQSHPT---VQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554
++L++ + + + + +VYPN G + V W + S+ ++ +WL+ GV I
Sbjct: 239 TSLLKGVNKGNTDDNLIPLVVYPNSGEKY-LVTEGWKKCGEAPSLHEFIDEWLDLGVRYI 297
Query: 555 GGCCEVTSYEIQQMRIMID 573
GGCC + ++++++ +D
Sbjct: 298 GGCCRTCAVDVKRIKSKVD 316
>gi|328782294|ref|XP_003250116.1| PREDICTED: homocysteine S-methyltransferase ybgG-like [Apis
mellifera]
Length = 320
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/271 (43%), Positives = 165/271 (60%), Gaps = 19/271 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V +LDG F++Q++ H +DG PLW++ +L T P A + TH DF++AGADII ++ YQ
Sbjct: 3 EVMVLDGGFSTQLATHVDDTIDGDPLWTARFLVTNPNAIISTHLDFLKAGADIILTNTYQ 62
Query: 66 ANVDNLTK-LGYSEQEALDLLHKSVQLMNSA-----KDKENQTPDINLNKTFNLLTGHIE 119
A++D +K + +E+E+LD+ K+V A KD EN+ IN N
Sbjct: 63 ASIDGFSKYMNITEEESLDIFSKAVDYAKEAVNLYKKDIENKGNVINANPLI-------- 114
Query: 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 179
A SIGPYG L D SEYSG Y ++TE LI WHRP ++ L+ GV LA+ETIP ++E
Sbjct: 115 -AGSIGPYGACLHDASEYSGKYCSNVTEEFLINWHRPRIQKLIDNGVHILAIETIPCKQE 173
Query: 180 ALALVKLLREFPGQKAWLSFSCKDDTHT-SHGELISSAVTSCLL-ANPDQIQAIGVNCVR 237
A AL+KLL+EFP KAWLSFSC +D + + G C A P QI AIGVNC
Sbjct: 174 AEALIKLLKEFPNSKAWLSFSCCNDGKSIADGTNFQQIAMQCYREALPKQILAIGVNCTA 233
Query: 238 PSHVSTLVRCIKQSHPT--VQTIVYPNKGVK 266
P +V+ L++ I +++ V +VYPN G K
Sbjct: 234 PQNVTKLLKGINENNKQEFVPLVVYPNSGEK 264
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/329 (36%), Positives = 182/329 (55%), Gaps = 33/329 (10%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V +LDG F++Q++ H +DG PLW++ +L T P A + TH DF++ + + Y
Sbjct: 4 VMVLDGGFSTQLATHVDDTIDGDPLWTARFLVTNPNAIISTHLDFLKAGADIILT-NTYQ 62
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY----LALIKPSISSQ----- 375
+ S+Y ++TE + + + VDY + L K I ++
Sbjct: 63 ASIDGFSKYM-----NITEEESLD--------IFSKAVDYAKEAVNLYKKDIENKGNVIN 109
Query: 376 ----TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
A SIGPYG L D SEYSG Y ++TE LI WHRP ++ L+ GV LA+ETIP
Sbjct: 110 ANPLIAGSIGPYGACLHDASEYSGKYCSNVTEEFLINWHRPRIQKLIDNGVHILAIETIP 169
Query: 432 AEKEALALVKLLREFPGQKAWLSFSCKDDTHT-SHGELISSAVTSCLL-ANPDQIQAIGV 489
++EA AL+KLL+EFP KAWLSFSC +D + + G C A P QI AIGV
Sbjct: 170 CKQEAEALIKLLKEFPNSKAWLSFSCCNDGKSIADGTNFQQIAMQCYREALPKQILAIGV 229
Query: 490 NCVRPSHVSTLVRCIKQSHPT--VQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQW 546
NC P +V+ L++ I +++ V +VYPN G + ++ W + E+E S+ ++ +W
Sbjct: 230 NCTAPQNVTKLLKGINENNKQEFVPLVVYPNSGEKY-TIENGWTIKDEEECSLHEFIYEW 288
Query: 547 LEEGVNIIGGCCEVTSYEIQQMRIMIDEF 575
L GV IGGCC + +I+++R ++++
Sbjct: 289 LTLGVRYIGGCCRTNATDIKKIRSEVEKW 317
>gi|350420371|ref|XP_003492488.1| PREDICTED: homocysteine S-methyltransferase ybgG-like [Bombus
impatiens]
Length = 319
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/266 (43%), Positives = 168/266 (63%), Gaps = 9/266 (3%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+VK+LDG F++Q++ H +DG PLW++ +L T P A + TH DF++AGADIIQ++ YQ
Sbjct: 3 EVKVLDGGFSTQLATHVGDIIDGDPLWTARFLVTNPNAVISTHLDFLKAGADIIQTNTYQ 62
Query: 66 ANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
+VD +K + SE+E L+L K+V + AK+ N + NK N++ + A S+
Sbjct: 63 TSVDGFSKYMNLSEEEGLNLFSKAV---DYAKEAINLYKEEIKNKR-NVINANPLIAGSV 118
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L D SEY+G Y +++E L+ WHRP ++ L+ +GVD LA+ETIP ++EA ALV
Sbjct: 119 GPYGACLHDASEYTGKYCSTVSEEILMNWHRPRIQKLIESGVDMLAIETIPCKQEAKALV 178
Query: 185 KLLREFPGQKAWLSFSCK-DDTHTSHGELISSAVTSCLL-ANPDQIQAIGVNCVRPSHVS 242
KLL EFP KAWLSFSC D + G C A P QI AIGVNC+ P +V+
Sbjct: 179 KLLTEFPNSKAWLSFSCSYDGKSIADGSHFQDIALWCYKEALPGQILAIGVNCIAPQNVT 238
Query: 243 TLVRCIKQS--HPTVQTIVYPNKGVK 266
+L++ I ++ + +VYPN G K
Sbjct: 239 SLLKGINENCKQDFIPLVVYPNSGEK 264
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/330 (35%), Positives = 184/330 (55%), Gaps = 32/330 (9%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
VK+LDG F++Q++ H +DG PLW++ +L T P A + TH DF++ + + Y
Sbjct: 4 VKVLDGGFSTQLATHVGDIIDGDPLWTARFLVTNPNAVISTHLDFLKAGADIIQT-NTYQ 62
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY----LALIKPSISSQ----- 375
T + S+Y +++E + + L VDY + L K I ++
Sbjct: 63 TSVDGFSKYM-----NLSEEEGLN--------LFSKAVDYAKEAINLYKEEIKNKRNVIN 109
Query: 376 ----TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
A S+GPYG L D SEY+G Y +++E L+ WHRP ++ L+ +GVD LA+ETIP
Sbjct: 110 ANPLIAGSVGPYGACLHDASEYTGKYCSTVSEEILMNWHRPRIQKLIESGVDMLAIETIP 169
Query: 432 AEKEALALVKLLREFPGQKAWLSFSCK-DDTHTSHGELISSAVTSCLL-ANPDQIQAIGV 489
++EA ALVKLL EFP KAWLSFSC D + G C A P QI AIGV
Sbjct: 170 CKQEAKALVKLLTEFPNSKAWLSFSCSYDGKSIADGSHFQDIALWCYKEALPGQILAIGV 229
Query: 490 NCVRPSHVSTLVRCIKQS--HPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWL 547
NC+ P +V++L++ I ++ + +VYPN G + +V W+ + Y + ++ +WL
Sbjct: 230 NCIAPQNVTSLLKGINENCKQDFIPLVVYPNSGEKY-TVKQGWVKKGEGYCLQEFIHEWL 288
Query: 548 EEGVNIIGGCCEVTSYEIQQMRIMIDEFNT 577
+ GV IGGCC + +++++R ++++ +
Sbjct: 289 DLGVRYIGGCCRTNAVDVKKIRAEVEKWKS 318
>gi|307168595|gb|EFN61653.1| Homocysteine S-methyltransferase 1 [Camponotus floridanus]
Length = 324
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/276 (45%), Positives = 171/276 (61%), Gaps = 20/276 (7%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
VK+LDG F+ Q+SRH +DG PLW++ +L T+P+A TH DF+RAG DII+++ YQA
Sbjct: 5 VKILDGGFSGQLSRHVGAKIDGDPLWTARFLATDPDAVYATHLDFLRAGVDIIETNTYQA 64
Query: 67 NVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIE--TAAS 123
+V L + L +E E+L+LL K+V L A D I++ +T NL H A S
Sbjct: 65 SVPGLMRYLNVNEHESLNLLAKAVGLAKKAVD-------IHIQETDNLRKPHTRPMIAGS 117
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
GPYG L D SEY+G Y S++ +LI WHRP V+AL+ AGVD LALETIP +EA AL
Sbjct: 118 CGPYGAYLHDSSEYTGFYGKSVSRQELIDWHRPRVQALLDAGVDLLALETIPCIEEAEAL 177
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
++LLREFP +AWLSFSC+D + G + C A P QI A+G+NC+ +V+
Sbjct: 178 LELLREFPHARAWLSFSCRDGQLLADGSIFQEVAVRCYRALPSQIVAVGINCIDSRYVTP 237
Query: 244 LVRCIK-----QSHPTVQTIVYPNKGVKLLDGSFTS 274
L++ I S + IVYPN+G GS++S
Sbjct: 238 LLKGINVNGKSSSQDFIPLIVYPNRG-----GSYSS 268
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/324 (38%), Positives = 182/324 (56%), Gaps = 18/324 (5%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
VK+LDG F+ Q+SRH +DG PLW++ +L T+P+A TH DF+R ++ + Y
Sbjct: 5 VKILDGGFSGQLSRHVGAKIDGDPLWTARFLATDPDAVYATHLDFLRAGVDIIET-NTYQ 63
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA-----LIKPSISSQTAAS 379
+ Y V+ +L+A L + VD L KP A S
Sbjct: 64 ASVPGLMRYLN--VNEHESLNLLA----KAVGLAKKAVDIHIQETDNLRKPHTRPMIAGS 117
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
GPYG L D SEY+G Y S++ +LI WHRP V+AL+ AGVD LALETIP +EA AL
Sbjct: 118 CGPYGAYLHDSSEYTGFYGKSVSRQELIDWHRPRVQALLDAGVDLLALETIPCIEEAEAL 177
Query: 440 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
++LLREFP +AWLSFSC+D + G + C A P QI A+G+NC+ +V+
Sbjct: 178 LELLREFPHARAWLSFSCRDGQLLADGSIFQEVAVRCYRALPSQIVAVGINCIDSRYVTP 237
Query: 500 LVRCIK-----QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554
L++ I S + IVYPN+GG + S+ W D++S+ + +W++ GV I
Sbjct: 238 LLKGINVNGKSSSQDFIPLIVYPNRGGSYSSID-GWTAVPDDHSLKLPISEWVDMGVRYI 296
Query: 555 GGCCEVTSYEIQQMRIMIDEFNTK 578
GGCC++ + +I+ +R +D++ K
Sbjct: 297 GGCCKIFAEDIKVIRSEVDQYCAK 320
>gi|332021679|gb|EGI62035.1| Homocysteine S-methyltransferase ybgG [Acromyrmex echinatior]
Length = 322
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/284 (41%), Positives = 167/284 (58%), Gaps = 23/284 (8%)
Query: 8 KLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQAN 67
K+LDG F+ Q+SRH +DG PLW++ +L T +A TH DF+RAGADII+++ YQA+
Sbjct: 10 KILDGGFSGQLSRHVNTKIDGDPLWTARFLKTNVDAIYATHLDFLRAGADIIETNTYQAS 69
Query: 68 VDNLTK-LGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAAS 123
V + K L SE E+L+LL SV L A D +E P A S
Sbjct: 70 VPGMMKYLNISEHESLNLLKTSVNLARKAVDDYIREESIP----------FESRPMVAGS 119
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
GPYG L +GSEY+G Y +++ +LI WHRP V+AL+ A D LA ETIP +EA A+
Sbjct: 120 CGPYGAYLHNGSEYTGSYGKNISRQELIDWHRPRVKALLNADTDLLAFETIPCVEEAEAI 179
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
++LL+E+P +AWLSFSC+D S G + + C P QI A+GVNC+ P +V+
Sbjct: 180 LELLKEYPHARAWLSFSCRDGQFMSDGSVFQNTAVRCYRTLPLQIVAVGVNCIDPKYVTP 239
Query: 244 LVRCIKQSHPTVQ----TIVYPNKGVKLLDGSFTSQVSRHTIKD 283
L++ I +S + Q +VYPN+G GS+++ ++D
Sbjct: 240 LLKGINESASSEQDFIPLVVYPNRG-----GSYSTNGEWIAVQD 278
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 115/322 (35%), Positives = 187/322 (58%), Gaps = 19/322 (5%)
Query: 266 KLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIGP 322
K+LDG F+ Q+SRH +DG PLW++ +L T +A TH DF+R IET
Sbjct: 10 KILDGGFSGQLSRHVNTKIDGDPLWTARFLKTNVDAIYATHLDFLRAGADIIETNTYQAS 69
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--TAASI 380
+++ Y++ ++E + + + +V +A DY+ S+ A S
Sbjct: 70 VPGMMK--------YLN-ISEHESLNLLKTSVNLARKAVDDYIREESIPFESRPMVAGSC 120
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GPYG L +GSEY+G Y +++ +LI WHRP V+AL+ A D LA ETIP +EA A++
Sbjct: 121 GPYGAYLHNGSEYTGSYGKNISRQELIDWHRPRVKALLNADTDLLAFETIPCVEEAEAIL 180
Query: 441 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 500
+LL+E+P +AWLSFSC+D S G + + C P QI A+GVNC+ P +V+ L
Sbjct: 181 ELLKEYPHARAWLSFSCRDGQFMSDGSVFQNTAVRCYRTLPLQIVAVGVNCIDPKYVTPL 240
Query: 501 VRCIKQSHPTVQ----TIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556
++ I +S + Q +VYPN+GG + S + +W+ +D++S+ + +WL+ G+ IGG
Sbjct: 241 LKGINESASSEQDFIPLVVYPNRGGSY-STNGEWIAVQDDHSLNLPMSEWLDLGIRYIGG 299
Query: 557 CCEVTSYEIQQMRIMIDEFNTK 578
CC++ + +I+ +R ++ + K
Sbjct: 300 CCKIFAEDIKLIRSEVNRHSKK 321
>gi|91080855|ref|XP_971795.1| PREDICTED: similar to homocysteine S-methyltransferase [Tribolium
castaneum]
gi|270005414|gb|EFA01862.1| hypothetical protein TcasGA2_TC007465 [Tribolium castaneum]
Length = 313
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/265 (42%), Positives = 168/265 (63%), Gaps = 17/265 (6%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K+ LLDGSF Q+S++ K +DG PLWS+ L ++PEA + H D+I+AG DII+++ YQ
Sbjct: 7 KIVLLDGSFGFQLSKYVSKSLDGDPLWSARSLASDPEAVIRVHLDYIKAGCDIIETNSYQ 66
Query: 66 ANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIE--TAA 122
A+V K L S++E+ +L+ KSV L +A ++ + +L G + A
Sbjct: 67 ASVPGFMKYLNLSKEESYNLVKKSVVLAKTAIERAQKE---------GILQGDAKPLIAG 117
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
S+GPYG L DGSEY+G+Y D ++ + + +H+ ++AL+ GVD LA+ETIP++KEA
Sbjct: 118 SVGPYGAYLHDGSEYNGYYTDRISREEFVDYHKSRIDALIEGGVDLLAIETIPSKKEAEI 177
Query: 183 LVKLLREFPGQKAWLSFSCK-DDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 241
+V+L++E+P KAWLSFSC+ + T+HG+ A TSC NPDQI A+GVNC+ P V
Sbjct: 178 IVQLIKEYPDIKAWLSFSCQTEGACTAHGDNFKDAATSCYKLNPDQILAVGVNCIAPHAV 237
Query: 242 STLVRCIKQSHPTVQTIVYPNKGVK 266
L++ I + IVY N G K
Sbjct: 238 EPLLKEITD----IPLIVYANSGEK 258
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 122/313 (38%), Positives = 176/313 (56%), Gaps = 24/313 (7%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IET--- 316
K + LLDGSF Q+S++ K +DG PLWS+ L ++PEA + H D+I+ IET
Sbjct: 6 KKIVLLDGSFGFQLSKYVSKSLDGDPLWSARSLASDPEAVIRVHLDYIKAGCDIIETNSY 65
Query: 317 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT 376
AS+ + L E S + V A R E +++ KP I
Sbjct: 66 QASVPGFMKYLNLSKEESYNLVKKSVVLAKTAIERAQKEGILQGDA------KPLI---- 115
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S+GPYG L DGSEY+G+Y D ++ + + +H+ ++AL+ GVD LA+ETIP++KEA
Sbjct: 116 AGSVGPYGAYLHDGSEYNGYYTDRISREEFVDYHKSRIDALIEGGVDLLAIETIPSKKEA 175
Query: 437 LALVKLLREFPGQKAWLSFSCK-DDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
+V+L++E+P KAWLSFSC+ + T+HG+ A TSC NPDQI A+GVNC+ P
Sbjct: 176 EIIVQLIKEYPDIKAWLSFSCQTEGACTAHGDNFKDAATSCYKLNPDQILAVGVNCIAPH 235
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
V L++ I + IVY N G +D + W + ++ + YVP WL GV IG
Sbjct: 236 AVEPLLKEITD----IPLIVYANSGEKYDP-DLGWDNNCEK--LEEYVPVWLNLGVKYIG 288
Query: 556 GCCEVTSYEIQQM 568
GCC V I ++
Sbjct: 289 GCCRVCDNYITKI 301
>gi|357606652|gb|EHJ65150.1| putative homocysteine S-methyltransferase isoform 1 [Danaus
plexippus]
Length = 341
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/265 (42%), Positives = 160/265 (60%), Gaps = 12/265 (4%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ +LDG F++Q+S H +DG PLWS+ +L T P V TH DF+RAGA+ I ++ YQA
Sbjct: 14 IVVLDGGFSTQLSCHVGHVIDGDPLWSARFLHTHPNEVVNTHLDFLRAGANFIITNTYQA 73
Query: 67 NVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLT-GHIE-TAAS 123
+V+ + L + ++ +L+ ++V+L A+ + L + N + H+ S
Sbjct: 74 SVEGFVEHLDLTPEQGYELITRAVELAKQART-------LYLEEYENYIQHDHVPLVVGS 126
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G Y D+ + + WHRP ++AL+ AGVD LALETIP ++EA L
Sbjct: 127 VGPYGAHLHDGSEYDGSYADTTSAQTMREWHRPRIQALIEAGVDLLALETIPCQEEAEML 186
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
LLREFP KAWLSFSCKD+ +HGE C +N DQ+ A+GVNC PS V++
Sbjct: 187 CDLLREFPNMKAWLSFSCKDNQSIAHGESFQKVAKKCWESNSDQLVAVGVNCCAPSFVTS 246
Query: 244 LVRCIKQSHP--TVQTIVYPNKGVK 266
L++ I P + IVYPN G K
Sbjct: 247 LLKGINDDRPHDPIPLIVYPNSGEK 271
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 122/323 (37%), Positives = 173/323 (53%), Gaps = 14/323 (4%)
Query: 253 PTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRG 312
PT + V P + +LDG F++Q+S H +DG PLWS+ +L T P V TH DF+R
Sbjct: 3 PTNEDGVEPPH-IVVLDGGFSTQLSCHVGHVIDGDPLWSARFLHTHPNEVVNTHLDFLR- 60
Query: 313 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSI 372
A + + E ++D E R VE +A YL + I
Sbjct: 61 ----AGANFIITNTYQASVEGFVEHLDLTPEQGYELITRA-VELAKQARTLYLEEYENYI 115
Query: 373 SSQ----TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE 428
S+GPYG L DGSEY G Y D+ + + WHRP ++AL+ AGVD LALE
Sbjct: 116 QHDHVPLVVGSVGPYGAHLHDGSEYDGSYADTTSAQTMREWHRPRIQALIEAGVDLLALE 175
Query: 429 TIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIG 488
TIP ++EA L LLREFP KAWLSFSCKD+ +HGE C +N DQ+ A+G
Sbjct: 176 TIPCQEEAEMLCDLLREFPNMKAWLSFSCKDNQSIAHGESFQKVAKKCWESNSDQLVAVG 235
Query: 489 VNCVRPSHVSTLVRCIKQSHP--TVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQW 546
VNC PS V++L++ I P + IVYPN G ++ + W+D + + ++ +W
Sbjct: 236 VNCCAPSFVTSLLKGINDDRPHDPIPLIVYPNSGEKYNP-QIGWIDRDKCEPVEVFIQEW 294
Query: 547 LEEGVNIIGGCCEVTSYEIQQMR 569
L+ GV +GGCC + ++ ++R
Sbjct: 295 LDLGVRYVGGCCRTYAADVSRIR 317
>gi|332021681|gb|EGI62037.1| Homocysteine S-methyltransferase ybgG [Acromyrmex echinatior]
Length = 318
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 118/267 (44%), Positives = 170/267 (63%), Gaps = 11/267 (4%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K+K+LDG F++Q+S H + ++G PLW++ +L T+P+A TH DF+RAGADII+++ YQ
Sbjct: 3 KIKVLDGGFSTQLSTHLDEKINGDPLWTARFLITKPKAVFATHLDFLRAGADIIETNTYQ 62
Query: 66 ANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKEN-QTPDINLNKTFNLLTGHIETAAS 123
A D K LG +E+E+L+++ K+V + AKD N + +I +K N+ A S
Sbjct: 63 ATTDGFVKHLGITEEESLEIIRKAV---DYAKDAVNVYSKEIENDK--NVRNRKPLIAGS 117
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
GPYG L DGSEY G Y +++ LI WHRP + AL+ GVD LA+ETIP +EA A+
Sbjct: 118 CGPYGACLHDGSEYIGSYCINVSREFLINWHRPRIRALLERGVDLLAIETIPCVREAEAI 177
Query: 184 VKLLREFPGQKAWLSFSCKDDTHT-SHGELISSAVTSCLL-ANPDQIQAIGVNCVRPSHV 241
+ LL+EFP +AWLSFSC++D + + G C A P QI AIGVNC+ P V
Sbjct: 178 IDLLKEFPDTQAWLSFSCRNDGKSLADGNNFQELAVRCYKNALPGQILAIGVNCIAPQCV 237
Query: 242 STLVRCIKQS--HPTVQTIVYPNKGVK 266
+TL++ I ++ + + IVYPN G K
Sbjct: 238 TTLLQDINKNKLNDLIPLIVYPNSGEK 264
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 122/323 (37%), Positives = 180/323 (55%), Gaps = 18/323 (5%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+K+LDG F++Q+S H + ++G PLW++ +L T+P+A TH DF+R A I
Sbjct: 4 IKVLDGGFSTQLSTHLDEKINGDPLWTARFLITKPKAVFATHLDFLRA----GADIIETN 59
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT-----AAS 379
T + H +TE + + R V+ A Y I+ + + A S
Sbjct: 60 TYQATTDGFVKHL--GITEEESLEIIRKAVDYAKDAVNVYSKEIENDKNVRNRKPLIAGS 117
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
GPYG L DGSEY G Y +++ LI WHRP + AL+ GVD LA+ETIP +EA A+
Sbjct: 118 CGPYGACLHDGSEYIGSYCINVSREFLINWHRPRIRALLERGVDLLAIETIPCVREAEAI 177
Query: 440 VKLLREFPGQKAWLSFSCKDDTHT-SHGELISSAVTSCLL-ANPDQIQAIGVNCVRPSHV 497
+ LL+EFP +AWLSFSC++D + + G C A P QI AIGVNC+ P V
Sbjct: 178 IDLLKEFPDTQAWLSFSCRNDGKSLADGNNFQELAVRCYKNALPGQILAIGVNCIAPQCV 237
Query: 498 STLVRCIKQS--HPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILH-YVPQWLEEGVNII 554
+TL++ I ++ + + IVYPN G + +V W E E + LH ++ +WL+ GV I
Sbjct: 238 TTLLQDINKNKLNDLIPLIVYPNSGEKY-TVSEGW-KKEGEIASLHEFIDEWLDLGVRYI 295
Query: 555 GGCCEVTSYEIQQMRIMIDEFNT 577
GGCC + +I+Q+R +D+ T
Sbjct: 296 GGCCRTYAMDIKQIRSKVDQCRT 318
>gi|380013277|ref|XP_003690691.1| PREDICTED: homocysteine S-methyltransferase-like [Apis florea]
Length = 320
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 118/273 (43%), Positives = 159/273 (58%), Gaps = 30/273 (10%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
VK+LDG F +Q+S H + VDG PLW+S +L T P A TH DF++AGADII+++ YQA
Sbjct: 3 VKILDGGFGAQLSTHVNEKVDGDPLWTSKFLVTNPNAVYATHLDFLKAGADIIETNTYQA 62
Query: 67 NVDNLTK-LGYSEQEALDLLHKSVQLMNSA-----------KDKENQTPDINLNKTFNLL 114
++ +L K L SE+E++ LLHK+V L +A D EN+ P I
Sbjct: 63 SIPSLMKHLSISEEESIKLLHKAVHLAKTAVNDYTKEVIDSNDVENKNPMI--------- 113
Query: 115 TGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI 174
AS GPYG L DGSEY+G Y ++I WH+ ++A++ AG+D LALETI
Sbjct: 114 ------VASCGPYGASLHDGSEYNGAYGKITPRENIIQWHKSRIDAIINAGIDLLALETI 167
Query: 175 PAEKEALALVKLLREFPGQKAWLSFSCKDDTHT-SHGELISSAVTSCLLANPDQIQAIGV 233
P +EA A+V+LLRE+P KAWLSFSC+ +T G T C P QI AIGV
Sbjct: 168 PCYQEAEAIVELLREYPNTKAWLSFSCERNTQKIVDGSNFQELSTRCYKTLPGQIVAIGV 227
Query: 234 NCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKG 264
NC+ P V+ L++ I + + I YPN G
Sbjct: 228 NCIAPKDVTPLLKNINMGSGNDFIPLIAYPNSG 260
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 173/326 (53%), Gaps = 21/326 (6%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIG 321
VK+LDG F +Q+S H + VDG PLW+S +L T P A TH DF++ IET
Sbjct: 3 VKILDGGFGAQLSTHVNEKVDGDPLWTSKFLVTNPNAVYATHLDFLKAGADIIETNTYQA 62
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT----- 376
++++ H S++E + I V A DY + S +
Sbjct: 63 SIPSLMK-------HL--SISEEESIKLLHKAVHLAKTAVNDYTKEVIDSNDVENKNPMI 113
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
AS GPYG L DGSEY+G Y ++I WH+ ++A++ AG+D LALETIP +EA
Sbjct: 114 VASCGPYGASLHDGSEYNGAYGKITPRENIIQWHKSRIDAIINAGIDLLALETIPCYQEA 173
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHT-SHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
A+V+LLRE+P KAWLSFSC+ +T G T C P QI AIGVNC+ P
Sbjct: 174 EAIVELLREYPNTKAWLSFSCERNTQKIVDGSNFQELSTRCYKTLPGQIVAIGVNCIAPK 233
Query: 496 HVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNI 553
V+ L++ I + + I YPN G ++ S + W+ E + ++P+WLE G+
Sbjct: 234 DVTPLLKNINMGSGNDFIPLIAYPNSGEIY-SPNEGWIKNESCAPLESFIPEWLEFGIRY 292
Query: 554 IGGCCEVTSYEIQQMRIMIDEFNTKK 579
+GGCC + + I+ +R ++ F K
Sbjct: 293 LGGCCRMYAENIKSIRKAVNNFKKSK 318
>gi|66501633|ref|XP_623182.1| PREDICTED: homocysteine S-methyltransferase 2-like [Apis mellifera]
Length = 320
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 115/273 (42%), Positives = 159/273 (58%), Gaps = 30/273 (10%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
VK+LDG F +Q+S H + VDG PLW+S +L T P A TH DF++AGADII+++ YQA
Sbjct: 3 VKILDGGFGAQLSTHVNEKVDGDPLWTSKFLVTNPNAVYATHLDFLKAGADIIETNTYQA 62
Query: 67 NVDNLTK-LGYSEQEALDLLHKSVQLMNSA-----------KDKENQTPDINLNKTFNLL 114
++ +L K L S++E++ LLHK+V L +A D EN+ P I
Sbjct: 63 SIPSLMKHLSISKEESIKLLHKAVHLAKTAVNDYTKEVINNNDVENKNPMI--------- 113
Query: 115 TGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI 174
AS GPYG L DGSEY+G Y ++I WH+ ++A++ AG+D LALETI
Sbjct: 114 ------VASCGPYGASLHDGSEYNGAYGKITPRENIIQWHKSRIDAIINAGIDLLALETI 167
Query: 175 PAEKEALALVKLLREFPGQKAWLSFSCKDDTHT-SHGELISSAVTSCLLANPDQIQAIGV 233
P +EA A++++LRE+P KAWLSFSC+ +T G T C P QI AIGV
Sbjct: 168 PCYQEAEAIIEVLREYPNTKAWLSFSCEKNTQKIVDGSNFQELSTRCYKTLPGQIVAIGV 227
Query: 234 NCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKG 264
NC+ P V+ L++ I + + I YPN G
Sbjct: 228 NCIAPKDVTPLLKNINMGSGNDFIPLIAYPNSG 260
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/324 (36%), Positives = 170/324 (52%), Gaps = 17/324 (5%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IET---AA 318
VK+LDG F +Q+S H + VDG PLW+S +L T P A TH DF++ IET A
Sbjct: 3 VKILDGGFGAQLSTHVNEKVDGDPLWTSKFLVTNPNAVYATHLDFLKAGADIIETNTYQA 62
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAA 378
SI L E S + A + E + V+ + + A
Sbjct: 63 SIPSLMKHLSISKEESIKLLHKAVHLAKTAVNDYTKEVINNNDVE-------NKNPMIVA 115
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S GPYG L DGSEY+G Y ++I WH+ ++A++ AG+D LALETIP +EA A
Sbjct: 116 SCGPYGASLHDGSEYNGAYGKITPRENIIQWHKSRIDAIINAGIDLLALETIPCYQEAEA 175
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHT-SHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
++++LRE+P KAWLSFSC+ +T G T C P QI AIGVNC+ P V
Sbjct: 176 IIEVLREYPNTKAWLSFSCEKNTQKIVDGSNFQELSTRCYKTLPGQIVAIGVNCIAPKDV 235
Query: 498 STLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
+ L++ I + + I YPN G ++ S + W+ E + ++P+WLE G+ +G
Sbjct: 236 TPLLKNINMGSGNDFIPLIAYPNSGEIY-SPNEGWIKNESCAPLESFIPEWLEFGIRYLG 294
Query: 556 GCCEVTSYEIQQMRIMIDEFNTKK 579
GCC + + I+ +R ++ F K
Sbjct: 295 GCCRMYAENIKSIRKAVNNFKKSK 318
>gi|383862211|ref|XP_003706577.1| PREDICTED: homocysteine S-methyltransferase 1-like [Megachile
rotundata]
Length = 325
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 122/327 (37%), Positives = 178/327 (54%), Gaps = 22/327 (6%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIG 321
VK+LDG F++Q+S H + +DG PLW++ +L T P A TH DF+R IET
Sbjct: 4 VKILDGGFSAQLSTHVGEKIDGDPLWTARFLATNPNAVYATHLDFLRAGADIIETNTYQA 63
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIK-----PSISSQT 376
+++ Y+ E + H+ V+ +A DYL I+ + S
Sbjct: 64 SIPGLMK--------YLSKTEEESINLLHQA-VKLAQKAVNDYLKEIEGNNDIENKSPLI 114
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S GPYG L DGSEY+G Y + ++ WHR + ALV +G+D LALET+P +EA
Sbjct: 115 AGSCGPYGASLHDGSEYNGAYGKATPRDTMMQWHRSRINALVDSGIDLLALETVPCYQEA 174
Query: 437 LALVKLLREFPGQKAWLSFSC-KDDTHTSHGELISSAVTSCL-LANPDQIQAIGVNCVRP 494
LV+LL+E+P KAWL+FSC ++ + G T+C +A P QI AIGVNC+ P
Sbjct: 175 EVLVELLKEYPNVKAWLTFSCERNSQNIVDGSNFQEVATNCYKMALPGQIIAIGVNCIAP 234
Query: 495 SHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552
VS L+R I + + + I YPN G ++ S W+ E +++P+WLE GV
Sbjct: 235 KDVSPLLRNINKDTGNQFIPLIAYPNSGEIFSSTK-GWIKDESCPPFENFIPEWLEIGVQ 293
Query: 553 IIGGCCEVTSYEIQQMRIMIDEFNTKK 579
+GGCC + + I+ +R I+ F KK
Sbjct: 294 YLGGCCRMYAENIKSIRREINNFKKKK 320
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 115/277 (41%), Positives = 164/277 (59%), Gaps = 31/277 (11%)
Query: 4 ICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+ VK+LDG F++Q+S H + +DG PLW++ +L T P A TH DF+RAGADII+++
Sbjct: 1 MSNVKILDGGFSAQLSTHVGEKIDGDPLWTARFLATNPNAVYATHLDFLRAGADIIETNT 60
Query: 64 YQANVDNLTK-LGYSEQEALDLLHKSVQLMNSA-----------KDKENQTPDINLNKTF 111
YQA++ L K L +E+E+++LLH++V+L A D EN++P I
Sbjct: 61 YQASIPGLMKYLSKTEEESINLLHQAVKLAQKAVNDYLKEIEGNNDIENKSPLI------ 114
Query: 112 NLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 171
A S GPYG L DGSEY+G Y + ++ WHR + ALV +G+D LAL
Sbjct: 115 ---------AGSCGPYGASLHDGSEYNGAYGKATPRDTMMQWHRSRINALVDSGIDLLAL 165
Query: 172 ETIPAEKEALALVKLLREFPGQKAWLSFSC-KDDTHTSHGELISSAVTSCL-LANPDQIQ 229
ET+P +EA LV+LL+E+P KAWL+FSC ++ + G T+C +A P QI
Sbjct: 166 ETVPCYQEAEVLVELLKEYPNVKAWLTFSCERNSQNIVDGSNFQEVATNCYKMALPGQII 225
Query: 230 AIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKG 264
AIGVNC+ P VS L+R I + + + I YPN G
Sbjct: 226 AIGVNCIAPKDVSPLLRNINKDTGNQFIPLIAYPNSG 262
>gi|340712661|ref|XP_003394874.1| PREDICTED: homocysteine S-methyltransferase-like [Bombus
terrestris]
Length = 321
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 119/274 (43%), Positives = 159/274 (58%), Gaps = 31/274 (11%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+K+LDG F+SQ+S H +DG PLW++ +L T P+A TH DF+RAGADII++S YQA
Sbjct: 3 IKILDGGFSSQLSTHINAKIDGDPLWTARFLATNPDAVYATHLDFLRAGADIIETSTYQA 62
Query: 67 NVDNLTK-LGYSEQEALDLLHKSVQLMNSA-----------KDKENQTPDINLNKTFNLL 114
+V +L K L +E+E + LLHK+V L +A D EN+ P I
Sbjct: 63 SVPDLMKYLSVTEEEGIKLLHKAVNLAKNAVNNYIKEIIENNDIENKNPII--------- 113
Query: 115 TGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI 174
A S GPYG L DGSEY+G Y + +I WH+ + ALV A ++ LALETI
Sbjct: 114 ------AGSCGPYGASLHDGSEYNGIYGKTTPRDTIIEWHKSRINALVDADINLLALETI 167
Query: 175 PAEKEALALVKLLREFPGQKAWLSFSCKDDTHT-SHGELISSAVTSCL-LANPDQIQAIG 232
P +EA AL++LLRE+P KAWLSFSCK D+ G C A P QI AIG
Sbjct: 168 PCYQEAEALIELLREYPNIKAWLSFSCKKDSQNIVDGSNFQEIALRCYKTALPGQIVAIG 227
Query: 233 VNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKG 264
VNC+ P +V+ L++ I ++ + I YPN G
Sbjct: 228 VNCIAPENVTPLLKNINTGPANEFIPLIAYPNSG 261
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/327 (37%), Positives = 179/327 (54%), Gaps = 22/327 (6%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIG 321
+K+LDG F+SQ+S H +DG PLW++ +L T P+A TH DF+R IET+
Sbjct: 3 IKILDGGFSSQLSTHINAKIDGDPLWTARFLATNPDAVYATHLDFLRAGADIIETST--- 59
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALI--KPSISSQT--- 376
Y + D +Y S+TE + I V A +Y+ I I ++
Sbjct: 60 -YQASVPDLMKYL-----SVTEEEGIKLLHKAVNLAKNAVNNYIKEIIENNDIENKNPII 113
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S GPYG L DGSEY+G Y + +I WH+ + ALV A ++ LALETIP +EA
Sbjct: 114 AGSCGPYGASLHDGSEYNGIYGKTTPRDTIIEWHKSRINALVDADINLLALETIPCYQEA 173
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHT-SHGELISSAVTSCL-LANPDQIQAIGVNCVRP 494
AL++LLRE+P KAWLSFSCK D+ G C A P QI AIGVNC+ P
Sbjct: 174 EALIELLREYPNIKAWLSFSCKKDSQNIVDGSNFQEIALRCYKTALPGQIVAIGVNCIAP 233
Query: 495 SHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552
+V+ L++ I ++ + I YPN G ++ W+ + S +++P+WLE G+
Sbjct: 234 ENVTPLLKNINTGPANEFIPLIAYPNSGEIYLQ-SKGWIKNGNSASFENFIPEWLELGIR 292
Query: 553 IIGGCCEVTSYEIQQMRIMIDEFNTKK 579
+GGCC + + +I+ +R ++ FN K+
Sbjct: 293 YLGGCCRMYAEDIKSIRKEVNNFNRKR 319
>gi|307168596|gb|EFN61654.1| Homocysteine S-methyltransferase 3 [Camponotus floridanus]
Length = 321
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/267 (41%), Positives = 159/267 (59%), Gaps = 7/267 (2%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K+K+LD F++Q+S H +DG PLW++ +L T+P A TH DF+RAGADII ++ YQ
Sbjct: 2 KIKVLDAGFSTQLSTHVGDKIDGDPLWTARFLVTDPNAVFATHLDFLRAGADIILTNTYQ 61
Query: 66 ANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
A +D K L +E+E+L ++ +V A + ++ + N N N A S
Sbjct: 62 ATIDGFVKYLNMTEEESLQIIGNAVDYAKDAVNVYSKEIEDNANIVTNR---KPLIAGSC 118
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSEY+G Y +++ LI WHRP + L+ GVD LA+ETIP +EA A++
Sbjct: 119 GPYGACLHDGSEYTGSYCPNVSRQFLIDWHRPRIRTLIEKGVDLLAIETIPCVREAEAII 178
Query: 185 KLLREFPGQKAWLSFSCKDDTHT-SHGELISSAVTSCL-LANPDQIQAIGVNCVRPSHVS 242
LL+EFP AWL+FSC+DD + + G C A P Q+ AIG+NC+ P +V+
Sbjct: 179 DLLKEFPDTYAWLTFSCRDDGKSIADGSNFQKIAMRCYKKALPGQLLAIGINCISPQYVT 238
Query: 243 TLVRCIKQ-SHPTVQTIVYPNKGVKLL 268
L++ I Q S + +VYPN G K +
Sbjct: 239 ALLKGINQNSDDFIPLVVYPNSGEKYI 265
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 116/323 (35%), Positives = 175/323 (54%), Gaps = 24/323 (7%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIET------AA 318
+K+LD F++Q+S H +DG PLW++ +L T+P A TH DF+R + A
Sbjct: 3 IKVLDAGFSTQLSTHVGDKIDGDPLWTARFLVTDPNAVFATHLDFLRAGADIILTNTYQA 62
Query: 319 SIGPYGTVLRDGSEYS----GHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISS 374
+I + L E S G+ VD +A + + +E + + KP I
Sbjct: 63 TIDGFVKYLNMTEEESLQIIGNAVDYAKDA--VNVYSKEIED----NANIVTNRKPLI-- 114
Query: 375 QTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 434
A S GPYG L DGSEY+G Y +++ LI WHRP + L+ GVD LA+ETIP +
Sbjct: 115 --AGSCGPYGACLHDGSEYTGSYCPNVSRQFLIDWHRPRIRTLIEKGVDLLAIETIPCVR 172
Query: 435 EALALVKLLREFPGQKAWLSFSCKDDTHT-SHGELISSAVTSCL-LANPDQIQAIGVNCV 492
EA A++ LL+EFP AWL+FSC+DD + + G C A P Q+ AIG+NC+
Sbjct: 173 EAEAIIDLLKEFPDTYAWLTFSCRDDGKSIADGSNFQKIAMRCYKKALPGQLLAIGINCI 232
Query: 493 RPSHVSTLVRCIKQ-SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGV 551
P +V+ L++ I Q S + +VYPN G + V W + S+ ++ +WL+ GV
Sbjct: 233 SPQYVTALLKGINQNSDDFIPLVVYPNSGEKY-IVSEGWKKEGEAPSLHEFIDEWLDLGV 291
Query: 552 NIIGGCCEVTSYEIQQMRIMIDE 574
IGGCC + +I+++R +D+
Sbjct: 292 CYIGGCCRTYATDIKKIRSKVDQ 314
>gi|157107160|ref|XP_001649650.1| 5-methyltetrahydrofolate:homocysteine methyltransferase [Aedes
aegypti]
gi|108879631|gb|EAT43856.1| AAEL004728-PA [Aedes aegypti]
Length = 315
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 172/319 (53%), Gaps = 15/319 (4%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V +LDG F +Q+S H K +DG PLWS+ + T P A +TH DF+ E + Y
Sbjct: 4 VTVLDGGFATQLSVHVGKHIDGDPLWSARFNATNPNAVFKTHLDFLEAGAECIMT-NTYQ 62
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
+ EY ++E + + V+ A Y+A + AS+GPYG
Sbjct: 63 ASIEGYMEYL-----DLSETGSLQLIKATVKLAQMARTKYMADNEVRRVPLVVASVGPYG 117
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
L DGSEY+G Y D +T + WHR ++A + AGVD L +ETIP + EA A++ ++
Sbjct: 118 AHLHDGSEYTGEYADYVTVDTIQKWHRARIDACLEAGVDVLGIETIPCKMEAEAMLDMMT 177
Query: 445 E-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL----LANPDQIQAIGVNCVRPSHVST 499
E +P + W+SF CKD+ H +HGE + V++ L + + AIGVNCV P V+
Sbjct: 178 EDYPHVRFWISFQCKDNAHIAHGENFADTVSNLWNKAKLFGNENLVAIGVNCVHPQFVTP 237
Query: 500 LVRCIKQSHPT---VQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556
L R + + PT + IVYPN G V+ SV W ED + HYVPQW+E G IGG
Sbjct: 238 LFRAVNEKRPTKERIPLIVYPNSGEVY-SVETGWQGKEDCVPLEHYVPQWVELGARYIGG 296
Query: 557 CCEVTSYEIQQMRIMIDEF 575
CC + +I+++++ ++
Sbjct: 297 CCRTYARDIERIKLAVNSL 315
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 156/271 (57%), Gaps = 24/271 (8%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V +LDG F +Q+S H K +DG PLWS+ + T P A +TH DF+ AGA+ I ++ YQ
Sbjct: 3 RVTVLDGGFATQLSVHVGKHIDGDPLWSARFNATNPNAVFKTHLDFLEAGAECIMTNTYQ 62
Query: 66 ANVDN-LTKLGYSEQEALDLLHKSVQLMNSAKDK---ENQTPDINLNKTFNLLTGHIETA 121
A+++ + L SE +L L+ +V+L A+ K +N+ + L
Sbjct: 63 ASIEGYMEYLDLSETGSLQLIKATVKLAQMARTKYMADNEVRRVPL------------VV 110
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
AS+GPYG L DGSEY+G Y D +T + WHR ++A + AGVD L +ETIP + EA
Sbjct: 111 ASVGPYGAHLHDGSEYTGEYADYVTVDTIQKWHRARIDACLEAGVDVLGIETIPCKMEAE 170
Query: 182 ALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL----LANPDQIQAIGVNCV 236
A++ ++ E +P + W+SF CKD+ H +HGE + V++ L + + AIGVNCV
Sbjct: 171 AMLDMMTEDYPHVRFWISFQCKDNAHIAHGENFADTVSNLWNKAKLFGNENLVAIGVNCV 230
Query: 237 RPSHVSTLVRCIKQSHPT---VQTIVYPNKG 264
P V+ L R + + PT + IVYPN G
Sbjct: 231 HPQFVTPLFRAVNEKRPTKERIPLIVYPNSG 261
>gi|350420352|ref|XP_003492482.1| PREDICTED: homocysteine S-methyltransferase-like [Bombus impatiens]
Length = 321
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 118/274 (43%), Positives = 157/274 (57%), Gaps = 31/274 (11%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+K+LDG F+SQ+S H +DG PLW++ +L T P A TH DF+RAGADII++S YQA
Sbjct: 3 IKILDGGFSSQLSTHIGAKIDGDPLWTARFLATNPNAVYATHLDFLRAGADIIETSTYQA 62
Query: 67 NVDNLTK-LGYSEQEALDLLHKSVQLMNSA-----------KDKENQTPDINLNKTFNLL 114
+V +L K L +E+E + LLHK+ L +A D EN+ P I
Sbjct: 63 SVPDLMKYLSVTEEEGIKLLHKAANLAKNAVNDYIKEIIDNNDIENKNPII--------- 113
Query: 115 TGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI 174
A S GPYG L DGSEY+G Y + +I WH+ + ALV A ++ LALETI
Sbjct: 114 ------AGSCGPYGASLHDGSEYNGTYGKTTPRDTIIEWHKSRINALVDADINLLALETI 167
Query: 175 PAEKEALALVKLLREFPGQKAWLSFSCKDDTHT-SHGELISSAVTSCL-LANPDQIQAIG 232
P +EA AL++LLRE+P KAWLSFSCK D+ G C A P QI AIG
Sbjct: 168 PCCQEAEALIELLREYPNIKAWLSFSCKKDSQNIVDGSNFQEIALRCYKTALPGQIVAIG 227
Query: 233 VNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKG 264
VNC+ P +V+ L++ I ++ + I YPN G
Sbjct: 228 VNCIAPENVTPLLKNINTGPANEFIPLIAYPNSG 261
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/327 (37%), Positives = 176/327 (53%), Gaps = 22/327 (6%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIG 321
+K+LDG F+SQ+S H +DG PLW++ +L T P A TH DF+R IET+
Sbjct: 3 IKILDGGFSSQLSTHIGAKIDGDPLWTARFLATNPNAVYATHLDFLRAGADIIETST--- 59
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALI--KPSISSQT--- 376
Y + D +Y S+TE + I A DY+ I I ++
Sbjct: 60 -YQASVPDLMKYL-----SVTEEEGIKLLHKAANLAKNAVNDYIKEIIDNNDIENKNPII 113
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S GPYG L DGSEY+G Y + +I WH+ + ALV A ++ LALETIP +EA
Sbjct: 114 AGSCGPYGASLHDGSEYNGTYGKTTPRDTIIEWHKSRINALVDADINLLALETIPCCQEA 173
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHT-SHGELISSAVTSCL-LANPDQIQAIGVNCVRP 494
AL++LLRE+P KAWLSFSCK D+ G C A P QI AIGVNC+ P
Sbjct: 174 EALIELLREYPNIKAWLSFSCKKDSQNIVDGSNFQEIALRCYKTALPGQIVAIGVNCIAP 233
Query: 495 SHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552
+V+ L++ I ++ + I YPN G ++ W+ + S +++P+WLE G+
Sbjct: 234 ENVTPLLKNINTGPANEFIPLIAYPNSGEIYLQSE-GWIKNGNSASFENFIPEWLELGIR 292
Query: 553 IIGGCCEVTSYEIQQMRIMIDEFNTKK 579
+GGCC + + +I+ +R ++ F K+
Sbjct: 293 YLGGCCRMYAEDIKSIRKEVNNFKRKR 319
>gi|156382071|ref|XP_001632378.1| predicted protein [Nematostella vectensis]
gi|156219433|gb|EDO40315.1| predicted protein [Nematostella vectensis]
Length = 265
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 108/253 (42%), Positives = 158/253 (62%), Gaps = 22/253 (8%)
Query: 26 VDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTK-LGYSEQEALDL 84
+ G PLWS+ L PEA + H+ F+ G+DII ++ YQA++ K LG + EA L
Sbjct: 3 MQGDPLWSARVLVENPEAVKQVHKSFLTHGSDIITTATYQASISGFCKHLGVTADEARKL 62
Query: 85 LHKSVQL----MNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGH 140
+ + V + ++ DK + +P + A S+ PYGT DGSEY G+
Sbjct: 63 IQRGVHIARESVDEFWDKHSNSPQV---------------AGSVCPYGTCQSDGSEYHGN 107
Query: 141 YVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFS 200
YVD+MT +L+ WHRP ++ALV G+D LA ETIPA+KE ALV+LL+EFPG KAWLS+S
Sbjct: 108 YVDTMTIKNLMDWHRPQIQALVETGLDLLAFETIPAQKEGEALVQLLKEFPGTKAWLSYS 167
Query: 201 CKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVY 260
CKD +HTSH E SA+ + +A+ +QI A+G NC P +V++L+R +K T+ ++Y
Sbjct: 168 CKDGSHTSHNEDFVSAIMAA-VADSEQIIAVGNNCCSPVYVTSLIRRLK-PKTTLPIVIY 225
Query: 261 PNKGVKLLDGSFT 273
PNKG + +D ++
Sbjct: 226 PNKGEEWIDRRYS 238
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 159/273 (58%), Gaps = 11/273 (4%)
Query: 284 VDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTE 343
+ G PLWS+ L PEA + H+ F+ H + Y + ++ G D +
Sbjct: 3 MQGDPLWSARVLVENPEAVKQVHKSFLT-HGSDIITTATYQASISGFCKHLGVTADEARK 61
Query: 344 ADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTE 403
H + R VD K S S Q A S+ PYGT DGSEY G+YVD+MT
Sbjct: 62 LIQRGVH------IARESVDEF-WDKHSNSPQVAGSVCPYGTCQSDGSEYHGNYVDTMTI 114
Query: 404 ADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHT 463
+L+ WHRP ++ALV G+D LA ETIPA+KE ALV+LL+EFPG KAWLS+SCKD +HT
Sbjct: 115 KNLMDWHRPQIQALVETGLDLLAFETIPAQKEGEALVQLLKEFPGTKAWLSYSCKDGSHT 174
Query: 464 SHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVW 523
SH E SA+ + +A+ +QI A+G NC P +V++L+R +K T+ ++YPNKG W
Sbjct: 175 SHNEDFVSAIMAA-VADSEQIIAVGNNCCSPVYVTSLIRRLK-PKTTLPIVIYPNKGEEW 232
Query: 524 -DSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
D + +W DT + ++ Y+ +W++ G IG
Sbjct: 233 IDRRYSEWQDTGNVPPVVSYLDEWIDSGAQWIG 265
>gi|332031666|gb|EGI71120.1| Homocysteine S-methyltransferase ybgG [Acromyrmex echinatior]
Length = 317
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 112/267 (41%), Positives = 162/267 (60%), Gaps = 9/267 (3%)
Query: 4 ICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+ ++K+L+G T Q+ + + DG PLW++ YL T+PEA + TH DF+RAG++II++
Sbjct: 1 MSEIKVLEGGAT-QLFINAGGETDGDPLWAARYLVTKPEAILATHLDFLRAGSNIIRTVT 59
Query: 64 YQANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAA 122
YQA +D K LG +++E+L+++ K+V A + T +I NK N+ A
Sbjct: 60 YQATIDGFVKYLGITKEESLEIIRKAVDYAKEAV--KIYTKEIENNK--NVTNQKPLIAG 115
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
S GPYG L DGSEY+G Y S++ L+ WHRP ++AL+ GVD LA+ETIP EA A
Sbjct: 116 SCGPYGASLHDGSEYTGSYCTSVSREFLMDWHRPRIQALLEKGVDVLAMETIPCAYEAEA 175
Query: 183 LVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLL-ANPDQIQAIGVNCVRPSHV 241
++ LL+EFP +AWLSFSCKD + G C A P QI AIG NC+ P +V
Sbjct: 176 IIDLLKEFPDARAWLSFSCKDGKSLADGSNFQETAVRCYKNAAPGQILAIGTNCIAPKYV 235
Query: 242 STLVRCIK--QSHPTVQTIVYPNKGVK 266
++L + I +S + +VYPN G K
Sbjct: 236 TSLFQGINRDKSDDFIPLVVYPNSGEK 262
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/319 (36%), Positives = 174/319 (54%), Gaps = 18/319 (5%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+K+L+G T Q+ + + DG PLW++ YL T+PEA + TH DF+R ++
Sbjct: 4 IKVLEGGAT-QLFINAGGETDGDPLWAARYLVTKPEAILATHLDFLRAGSNIIRTVTYQA 62
Query: 325 TVLRDGS-EYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIK--PSISSQT---AA 378
T+ DG +Y G +T+ + + R V+ A Y I+ ++++Q A
Sbjct: 63 TI--DGFVKYLG-----ITKEESLEIIRKAVDYAKEAVKIYTKEIENNKNVTNQKPLIAG 115
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S GPYG L DGSEY+G Y S++ L+ WHRP ++AL+ GVD LA+ETIP EA A
Sbjct: 116 SCGPYGASLHDGSEYTGSYCTSVSREFLMDWHRPRIQALLEKGVDVLAMETIPCAYEAEA 175
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLL-ANPDQIQAIGVNCVRPSHV 497
++ LL+EFP +AWLSFSCKD + G C A P QI AIG NC+ P +V
Sbjct: 176 IIDLLKEFPDARAWLSFSCKDGKSLADGSNFQETAVRCYKNAAPGQILAIGTNCIAPKYV 235
Query: 498 STLVRCIK--QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
++L + I +S + +VYPN G + W D ++ ++ +WL GV IG
Sbjct: 236 TSLFQGINRDKSDDFIPLVVYPNSGEKYTESE-GWNKEGDAPTLHEFIDEWLNLGVRYIG 294
Query: 556 GCCEVTSYEIQQMRIMIDE 574
GCC + +++ +R +D+
Sbjct: 295 GCCRTCATDVKLIRAKVDQ 313
>gi|289743225|gb|ADD20360.1| homocysteine S-methyltransferase [Glossina morsitans morsitans]
Length = 333
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/327 (36%), Positives = 184/327 (56%), Gaps = 22/327 (6%)
Query: 263 KGVKLLD-GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
KG+ L+ G F++Q+++H +DG PLW S + PEA ++TH DF+ E A I
Sbjct: 7 KGLVLVKSGGFSTQLAKHVGDKIDGDPLWGSRFDKENPEAVIQTHLDFL----EVGADII 62
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ------ 375
T ++ H ++T+ + I R +V+ ++A Y+ +K +
Sbjct: 63 VTNTYQSSVEGFTKHL--NLTKEESIDLMRESVKLAMQAKNKYIERLKDCNRHKEPGLPL 120
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
SIGPYG +L DGSEY+G Y + +T+ D+ WHR +EA++ GVD LA+ETIP + E
Sbjct: 121 IMGSIGPYGAMLHDGSEYNGSYTEQLTKQDIQQWHRTRIEAVLSGGVDGLAVETIPCQME 180
Query: 436 ALALVK-LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL----LANP-DQIQAIGV 489
A A+ + LL+++P K W+SF CKD+ H +HGE ++A S AN D++ IGV
Sbjct: 181 AEAVTEMLLKDYPDVKFWVSFQCKDELHLAHGENFANAAKSVWELVRKANAVDRLYGIGV 240
Query: 490 NCVRPSHVSTLVRCIKQ--SHPTV-QTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQW 546
NCV P VSTL + + + +H + Q IVY N+G ++D+ +W + + YVP+W
Sbjct: 241 NCVNPKFVSTLFQSLHKLLNHEQIPQLIVYSNRGEIYDATKGEWTGHDKCVPLASYVPEW 300
Query: 547 LEEGVNIIGGCCEVTSYEIQQMRIMID 573
++ IIGGCC V +I +R ID
Sbjct: 301 VQLQAKIIGGCCRVYPEDILAIRKCID 327
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 111/264 (42%), Positives = 166/264 (62%), Gaps = 15/264 (5%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL 71
G F++Q+++H +DG PLW S + PEA ++TH DF+ GADII ++ YQ++V+
Sbjct: 15 GGFSTQLAKHVGDKIDGDPLWGSRFDKENPEAVIQTHLDFLEVGADIIVTNTYQSSVEGF 74
Query: 72 TK-LGYSEQEALDLLHKSVQLMNSAKDKE-NQTPDINLNKTFNLLTGHIETAASIGPYGT 129
TK L +++E++DL+ +SV+L AK+K + D N +K L SIGPYG
Sbjct: 75 TKHLNLTKEESIDLMRESVKLAMQAKNKYIERLKDCNRHKEPGLPL----IMGSIGPYGA 130
Query: 130 VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK-LLR 188
+L DGSEY+G Y + +T+ D+ WHR +EA++ GVD LA+ETIP + EA A+ + LL+
Sbjct: 131 MLHDGSEYNGSYTEQLTKQDIQQWHRTRIEAVLSGGVDGLAVETIPCQMEAEAVTEMLLK 190
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL----LANP-DQIQAIGVNCVRPSHVST 243
++P K W+SF CKD+ H +HGE ++A S AN D++ IGVNCV P VST
Sbjct: 191 DYPDVKFWVSFQCKDELHLAHGENFANAAKSVWELVRKANAVDRLYGIGVNCVNPKFVST 250
Query: 244 LVRCIKQ--SHPTV-QTIVYPNKG 264
L + + + +H + Q IVY N+G
Sbjct: 251 LFQSLHKLLNHEQIPQLIVYSNRG 274
>gi|328716395|ref|XP_001946395.2| PREDICTED: homocysteine S-methyltransferase ybgG-like
[Acyrthosiphon pisum]
Length = 309
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 120/324 (37%), Positives = 175/324 (54%), Gaps = 23/324 (7%)
Query: 258 IVYPNKGVKLLDGSFTSQVSRHT-IKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIET 316
++ NK + LLDGSF S V+ + I V HPLW S L +A + H+D+I+ +
Sbjct: 1 MILSNK-MYLLDGSFISGVTPYVDIDSVMKHPLWGSHLLLNNEDAVIRGHKDYIKAGADF 59
Query: 317 AASIGPYGTVLRDGSEYSGHYVDS---MTEADLIAWHRPNVEALVRAGVDYLALIKPSIS 373
+I Y +R +Y D + + +I + E V +
Sbjct: 60 LTTI-TYQASIRGFQKYLDLDYDQSYELIKRSVIICRQAITEENVERNI----------- 107
Query: 374 SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
Q S+GPYG LRD SEY+G+Y+D+M +L WH+P ++ALV AGVD + ETIP+
Sbjct: 108 -QIMGSVGPYGASLRDCSEYNGNYIDTMNLKELYDWHKPRIQALVEAGVDVMLFETIPSV 166
Query: 434 KEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP--DQIQAIGVNC 491
EA L+ +L EFP QKA LSFSCKD H SHGE SSAV +N Q+ AIG+NC
Sbjct: 167 IEATILLNILTEFPNQKACLSFSCKDGNHLSHGETFSSAV-EMFWSNDYCKQLIAIGMNC 225
Query: 492 VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGV 551
+ P ++ L+ +K + V I YPN GG+WD + DT+ + + W ++G+
Sbjct: 226 LHPKFITPLLMSVKTKN--VNFITYPNGGGIWDITKNCYDDTQIYKVSIDDLNIWNKKGL 283
Query: 552 NIIGGCCEVTSYEIQQMRIMIDEF 575
I GGCC+ + EI ++R +ID+
Sbjct: 284 KIFGGCCKTDAIEIARLRSLIDDL 307
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/263 (41%), Positives = 153/263 (58%), Gaps = 20/263 (7%)
Query: 6 KVKLLDGSFTSQVSRHT-IKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
K+ LLDGSF S V+ + I V HPLW S L +A + H+D+I+AGAD + + Y
Sbjct: 6 KMYLLDGSFISGVTPYVDIDSVMKHPLWGSHLLLNNEDAVIRGHKDYIKAGADFLTTITY 65
Query: 65 QANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
QA++ K L ++ +L+ +SV + A +EN + +I+ S
Sbjct: 66 QASIRGFQKYLDLDYDQSYELIKRSVIICRQAITEEN-------------VERNIQIMGS 112
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG LRD SEY+G+Y+D+M +L WH+P ++ALV AGVD + ETIP+ EA L
Sbjct: 113 VGPYGASLRDCSEYNGNYIDTMNLKELYDWHKPRIQALVEAGVDVMLFETIPSVIEATIL 172
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP--DQIQAIGVNCVRPSHV 241
+ +L EFP QKA LSFSCKD H SHGE SSAV +N Q+ AIG+NC+ P +
Sbjct: 173 LNILTEFPNQKACLSFSCKDGNHLSHGETFSSAV-EMFWSNDYCKQLIAIGMNCLHPKFI 231
Query: 242 STLVRCIKQSHPTVQTIVYPNKG 264
+ L+ +K + V I YPN G
Sbjct: 232 TPLLMSVKTKN--VNFITYPNGG 252
>gi|170046469|ref|XP_001850787.1| homocysteine S-methyltransferase [Culex quinquefasciatus]
gi|167869210|gb|EDS32593.1| homocysteine S-methyltransferase [Culex quinquefasciatus]
Length = 324
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 172/322 (53%), Gaps = 17/322 (5%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V +LDG F +Q+S H K VDG PLWS+ + T P A +TH DF+ + +
Sbjct: 8 VTVLDGGFATQLSVHVGKHVDGDPLWSARFNATNPNAVYKTHLDFLEAGAQCIMT----- 62
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
+ E G Y+D ++EA I + V+ A +LA ASIGPYG
Sbjct: 63 NTYQASIEGYGEYLD-LSEAASIQLIKSTVKLAHMARTKHLAESDIREIPLVVASIGPYG 121
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
L DGSEY+G Y D ++ + WHR ++A + AGVD L +ETIP + EA A+++++
Sbjct: 122 AHLHDGSEYTGEYADYVSANTIQKWHRSRIDACLEAGVDVLGIETIPCKMEADAMLEMMT 181
Query: 445 E-FPGQKAWLSFSCKDDTHTSHGELISSAVT-----SCLLANPDQIQAIGVNCVRPSHVS 498
E +P K W+SF CKD H + GE + V+ + LL N D + A+GVNCV P V+
Sbjct: 182 EDYPHVKFWISFQCKDSAHLARGENFAETVSYIWNKAKLLGN-DNLIALGVNCVHPQFVT 240
Query: 499 TLVRCIKQSHPTVQT---IVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
L R + + V+ IVYPN G V+ SV W ED + YVPQW++ G IG
Sbjct: 241 PLFRAVNEKRSPVERIPLIVYPNSGEVY-SVETGWQGKEDCVPLEQYVPQWIDLGARFIG 299
Query: 556 GCCEVTSYEIQQMRIMIDEFNT 577
GCC + +I++++ + T
Sbjct: 300 GCCRTYARDIKRIKQAVTALQT 321
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/268 (39%), Positives = 155/268 (57%), Gaps = 20/268 (7%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG F +Q+S H K VDG PLWS+ + T P A +TH DF+ AGA I ++ YQA
Sbjct: 8 VTVLDGGFATQLSVHVGKHVDGDPLWSARFNATNPNAVYKTHLDFLEAGAQCIMTNTYQA 67
Query: 67 NVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
+++ + L SE ++ L+ +V+L + A+ K DI + L+ ASIG
Sbjct: 68 SIEGYGEYLDLSEAASIQLIKSTVKLAHMARTKHLAESDI---REIPLVV------ASIG 118
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY+G Y D ++ + WHR ++A + AGVD L +ETIP + EA A+++
Sbjct: 119 PYGAHLHDGSEYTGEYADYVSANTIQKWHRSRIDACLEAGVDVLGIETIPCKMEADAMLE 178
Query: 186 LLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVT-----SCLLANPDQIQAIGVNCVRPS 239
++ E +P K W+SF CKD H + GE + V+ + LL N D + A+GVNCV P
Sbjct: 179 MMTEDYPHVKFWISFQCKDSAHLARGENFAETVSYIWNKAKLLGN-DNLIALGVNCVHPQ 237
Query: 240 HVSTLVRCIKQSHPTVQT---IVYPNKG 264
V+ L R + + V+ IVYPN G
Sbjct: 238 FVTPLFRAVNEKRSPVERIPLIVYPNSG 265
>gi|91083213|ref|XP_966501.1| PREDICTED: similar to homocysteine S-methyltransferase isoform 1
[Tribolium castaneum]
gi|270006942|gb|EFA03390.1| hypothetical protein TcasGA2_TC013376 [Tribolium castaneum]
Length = 348
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 117/328 (35%), Positives = 171/328 (52%), Gaps = 22/328 (6%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETA----- 317
+ + +LDG F +Q+S H + +DG LWS+ +L T+ EA ++ H DF+R +
Sbjct: 23 RDIVVLDGGFATQLSCHVSQQIDGDVLWSARFLATDKEAIIDAHLDFLRAGADLVITNSY 82
Query: 318 -ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT 376
ASIG + L+ + S + + IA R N E S
Sbjct: 83 QASIGGFMEHLKLTKDQSYELIKESVKLARIACQRYNKE------------FPNSTPPMV 130
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
S+GPYG L DGSEY+G Y + + WH P + ALV AGVD LALETIP + EA
Sbjct: 131 VGSVGPYGASLHDGSEYTGSYAKTTPVETMREWHIPRIRALVEAGVDLLALETIPCKIEA 190
Query: 437 LALVKLL-REFPGQKAWLSFSCKDDTHT-SHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
LV+LL +EFP KAWLSFS + D + ++GE C NP Q+ A+GVNCV P
Sbjct: 191 EMLVELLKKEFPNTKAWLSFSVRQDGKSLAYGESFQEVARYCYDLNPQQLVAVGVNCVAP 250
Query: 495 SHVSTLVRCIKQSHPT-VQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNI 553
V TL+ I + V +VYPN G + V + W+D + + YV +WL+ GV
Sbjct: 251 RLVETLISGINKDRKNPVPLVVYPNSGESY-KVELGWIDRDKCEPVDTYVQKWLDLGVTW 309
Query: 554 IGGCCEVTSYEIQQMRIMIDEFNTKKND 581
+GGCC + ++ ++R ++++ K +
Sbjct: 310 VGGCCRTYATDVSRIRQEVEKWKRNKEE 337
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/262 (40%), Positives = 155/262 (59%), Gaps = 13/262 (4%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ +LDG F +Q+S H + +DG LWS+ +L T+ EA ++ H DF+RAGAD++ ++ YQA
Sbjct: 25 IVVLDGGFATQLSCHVSQQIDGDVLWSARFLATDKEAIIDAHLDFLRAGADLVITNSYQA 84
Query: 67 NVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
++ + L ++ ++ +L+ +SV+L A + N+ N T ++ G S+G
Sbjct: 85 SIGGFMEHLKLTKDQSYELIKESVKLARIACQRYNKEFP---NSTPPMVVG------SVG 135
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY+G Y + + WH P + ALV AGVD LALETIP + EA LV+
Sbjct: 136 PYGASLHDGSEYTGSYAKTTPVETMREWHIPRIRALVEAGVDLLALETIPCKIEAEMLVE 195
Query: 186 LL-REFPGQKAWLSFSCKDDTHT-SHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
LL +EFP KAWLSFS + D + ++GE C NP Q+ A+GVNCV P V T
Sbjct: 196 LLKKEFPNTKAWLSFSVRQDGKSLAYGESFQEVARYCYDLNPQQLVAVGVNCVAPRLVET 255
Query: 244 LVRCIKQSHPT-VQTIVYPNKG 264
L+ I + V +VYPN G
Sbjct: 256 LISGINKDRKNPVPLVVYPNSG 277
>gi|332374172|gb|AEE62227.1| unknown [Dendroctonus ponderosae]
Length = 334
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/324 (35%), Positives = 175/324 (54%), Gaps = 22/324 (6%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIET----- 316
+K + +LDG F +Q+S H + +DG LWS+ +L ++PEA ++TH DF+R +
Sbjct: 19 SKNIVVLDGGFATQLSCHVSQPIDGDVLWSARFLASDPEAVIDTHIDFLRAGADLIITNT 78
Query: 317 -AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ 375
ASIG + L ++TE + A + +VE A YL +
Sbjct: 79 YQASIGLFVKHL------------NLTEEEAYALIKKSVELAHTAVERYLQEFPDAKKPL 126
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
S+GPYG L DGSEY+G Y S + AWH P ++AL+ GVD LA+ETIP E
Sbjct: 127 IVGSVGPYGASLHDGSEYTGAYASSTPVETMKAWHVPRIDALIEGGVDLLAIETIPCRAE 186
Query: 436 ALALVKLLRE-FPGQKAWLSFS-CKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
A LV LL++ +P KAWL+FS +D T+ GE +C NPDQ+ A+GVNC
Sbjct: 187 AEMLVNLLKDKYPQTKAWLAFSVAQDGKSTAFGEPFQETARACYDLNPDQLVAVGVNCTA 246
Query: 494 PSHVSTLVRCIKQSHPT-VQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552
P + +LV I T + +VYPN G ++ V M W++ + + Y+ +WL+ GV
Sbjct: 247 PRLIESLVDGINVGRSTPIPIVVYPNSGESYN-VEMGWINRDKCEPVETYIERWLDLGVT 305
Query: 553 IIGGCCEVTSYEIQQMRIMIDEFN 576
+GGCC + +I ++R ++++
Sbjct: 306 WLGGCCRTYAIDITRIRREVEKWK 329
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 111/264 (42%), Positives = 158/264 (59%), Gaps = 15/264 (5%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ +LDG F +Q+S H + +DG LWS+ +L ++PEA ++TH DF+RAGAD+I ++ YQ
Sbjct: 21 NIVVLDGGFATQLSCHVSQPIDGDVLWSARFLASDPEAVIDTHIDFLRAGADLIITNTYQ 80
Query: 66 ANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQT-PDINLNKTFNLLTGHIETAAS 123
A++ K L +E+EA L+ KSV+L ++A ++ Q PD L+ G S
Sbjct: 81 ASIGLFVKHLNLTEEEAYALIKKSVELAHTAVERYLQEFPDAKKP----LIVG------S 130
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY+G Y S + AWH P ++AL+ GVD LA+ETIP EA L
Sbjct: 131 VGPYGASLHDGSEYTGAYASSTPVETMKAWHVPRIDALIEGGVDLLAIETIPCRAEAEML 190
Query: 184 VKLLRE-FPGQKAWLSFS-CKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 241
V LL++ +P KAWL+FS +D T+ GE +C NPDQ+ A+GVNC P +
Sbjct: 191 VNLLKDKYPQTKAWLAFSVAQDGKSTAFGEPFQETARACYDLNPDQLVAVGVNCTAPRLI 250
Query: 242 STLVRCIKQSHPT-VQTIVYPNKG 264
+LV I T + +VYPN G
Sbjct: 251 ESLVDGINVGRSTPIPIVVYPNSG 274
>gi|194879912|ref|XP_001974327.1| GG21670 [Drosophila erecta]
gi|190657514|gb|EDV54727.1| GG21670 [Drosophila erecta]
Length = 331
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 178/320 (55%), Gaps = 19/320 (5%)
Query: 270 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRD 329
G F+SQ++R+ + VDG PLW S + T PEA ++TH DF+R + + Y + +
Sbjct: 19 GGFSSQLARNVSEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILT-NTYQSSVEG 77
Query: 330 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---TAASIGPYGTV 386
+Y G V +LI + +V+ +A YL+ I + S SIGPYG
Sbjct: 78 FMKYLG--VTRERGVELI---QKSVQLARQAKEQYLSEIGSELESALPLILGSIGPYGAY 132
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 445
L DGSEYSG+YV+++++ L AWHR +E + AGVD LALET+P + EA A+ +L L
Sbjct: 133 LHDGSEYSGNYVENISKEQLKAWHRTRIEICLAAGVDGLALETLPCQLEAEAVTELVLDN 192
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 500
FP K W+S C+D+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FPDAKFWVSMQCRDEKHLASGETFAEAALSVWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 501 VRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
+ + + + +VY N+G ++D+ +W T +E ++ +VP+WL+ GV I+GGCC
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRGEIYDTEQGEWTGTGEE--VVKFVPEWLQLGVRIVGGCC 310
Query: 559 EVTSYEIQQMRIMIDEFNTK 578
V ++ +R +D N K
Sbjct: 311 RVYPTDVLAIRTYVDGLNIK 330
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 104/262 (39%), Positives = 154/262 (58%), Gaps = 15/262 (5%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL 71
G F+SQ++R+ + VDG PLW S + T PEA ++TH DF+R GADII ++ YQ++V+
Sbjct: 19 GGFSSQLARNVSEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 72 TK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
K LG + + ++L+ KSVQL AK++ L L+ G SIGPYG
Sbjct: 79 MKYLGVTRERGVELIQKSVQLARQAKEQYLSEIGSELESALPLILG------SIGPYGAY 132
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 189
L DGSEYSG+YV+++++ L AWHR +E + AGVD LALET+P + EA A+ +L L
Sbjct: 133 LHDGSEYSGNYVENISKEQLKAWHRTRIEICLAAGVDGLALETLPCQLEAEAVTELVLDN 192
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 244
FP K W+S C+D+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FPDAKFWVSMQCRDEKHLASGETFAEAALSVWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ + + + +VY N+G
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRG 274
>gi|170035699|ref|XP_001845705.1| numb-associated kinase [Culex quinquefasciatus]
gi|167878011|gb|EDS41394.1| numb-associated kinase [Culex quinquefasciatus]
Length = 996
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/327 (37%), Positives = 180/327 (55%), Gaps = 34/327 (10%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKD-VDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASI 320
+K + ++DG F++Q++ H + +D PLWSS Y T P A +ETH DF++ +
Sbjct: 673 SKRIIVIDGGFSTQLATHVGQTTLDKDPLWSSRYNATNPNAVIETHLDFLKAGADC---- 728
Query: 321 GPYGTVLRDGSEYSGH-YVD--SMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT- 376
+L + + S Y+D +++E D I + VE A YLA I ++T
Sbjct: 729 -----ILTNTYQASIEGYMDFLNLSEEDSIKLIKTAVELAKLARTRYLA---EKIENKTH 780
Query: 377 -----AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
SIGPYG L DGSEY+G Y D++ A + WHR + A++ AGVD LA+ETIP
Sbjct: 781 KIPWVVGSIGPYGAHLHDGSEYTGAYADTVPYARIQKWHRQRINAVLEAGVDALAIETIP 840
Query: 432 AEKEALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC-----LLANPDQIQ 485
KEA AL++LL E P + W+SF CKD +T+ GE + + L NP+ +
Sbjct: 841 CRKEAEALLELLTTEHPTVRFWVSFQCKDGVNTARGENFAETAAAIWSQARALKNPN-LL 899
Query: 486 AIGVNCVRPSHVSTLVRCIKQSHP---TVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHY 542
AIGVNC+ P H L++ + P + IVYPN G +WD + W ED + Y
Sbjct: 900 AIGVNCLHPVHAVQLLKTANERRPDDDKIPLIVYPNSGEIWD--NGVWKGEEDCVPLETY 957
Query: 543 VPQWLEEGVNIIGGCCEVTSYEIQQMR 569
VPQ++E GV +GGCC T+ +I++++
Sbjct: 958 VPQFVEYGVKFVGGCCRTTAQDIKRIK 984
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 158/276 (57%), Gaps = 30/276 (10%)
Query: 6 KVKLLDGSFTSQVSRHTIKD-VDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
++ ++DG F++Q++ H + +D PLWSS Y T P A +ETH DF++AGAD I ++ Y
Sbjct: 675 RIIVIDGGFSTQLATHVGQTTLDKDPLWSSRYNATNPNAVIETHLDFLKAGADCILTNTY 734
Query: 65 QANVDN-LTKLGYSEQEALDLLHKSVQLMNSAKDK------ENQTPDINLNKTFNLLTGH 117
QA+++ + L SE++++ L+ +V+L A+ + EN+T I
Sbjct: 735 QASIEGYMDFLNLSEEDSIKLIKTAVELAKLARTRYLAEKIENKTHKIPW---------- 784
Query: 118 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 177
SIGPYG L DGSEY+G Y D++ A + WHR + A++ AGVD LA+ETIP
Sbjct: 785 --VVGSIGPYGAHLHDGSEYTGAYADTVPYARIQKWHRQRINAVLEAGVDALAIETIPCR 842
Query: 178 KEALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC-----LLANPDQIQAI 231
KEA AL++LL E P + W+SF CKD +T+ GE + + L NP+ + AI
Sbjct: 843 KEAEALLELLTTEHPTVRFWVSFQCKDGVNTARGENFAETAAAIWSQARALKNPN-LLAI 901
Query: 232 GVNCVRPSHVSTLVRCIKQSHP---TVQTIVYPNKG 264
GVNC+ P H L++ + P + IVYPN G
Sbjct: 902 GVNCLHPVHAVQLLKTANERRPDDDKIPLIVYPNSG 937
>gi|347967937|ref|XP_563710.4| AGAP002469-PA [Anopheles gambiae str. PEST]
gi|333468235|gb|EAL40920.4| AGAP002469-PA [Anopheles gambiae str. PEST]
Length = 1123
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/344 (34%), Positives = 181/344 (52%), Gaps = 34/344 (9%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
++ V ++DG F++Q++ H +D PLW+S + T P A +ETH D+++ +
Sbjct: 789 SRKVIVIDGGFSTQLTEHVGAKLDKDPLWTSRFNATNPAAVLETHLDYLKAGADC----- 843
Query: 322 PYGTVLRDGSEYS-GHYVD--SMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--- 375
+L + + S Y+D + E + + R +VE RA YLA + S +
Sbjct: 844 ----ILTNTYQASIEGYMDFLDLNEDESLKLIRASVELARRARTRYLAEKLENKSHKIPW 899
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
SIGPYG L DGSEY+G Y + + L WHRP + A+V AGVD LA+ETIP E
Sbjct: 900 VVGSIGPYGAHLHDGSEYTGAYAEHVPANRLQKWHRPRINAIVEAGVDALAIETIPCRME 959
Query: 436 ALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSC-----LLANPDQIQAIGV 489
A AL+ LL + P + W+SF C+D +HGE + V LANP+ + AIGV
Sbjct: 960 AEALLDLLSADHPTVRFWISFQCRDGASLAHGENFAETVLGLWNRARQLANPN-LLAIGV 1018
Query: 490 NCVRPSHVSTLVRCIKQ-----------SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYS 538
NCV P HV L+R + + + IVYPN G WD+ W E+
Sbjct: 1019 NCVNPQHVLPLLRSVHELLQQRAAGTPPESERIPLIVYPNSGEHWDAAASCWRGAENLTP 1078
Query: 539 ILHYVPQWLEEGVNIIGGCCEVTSYEIQQM-RIMIDEFNTKKND 581
+ Y+PQW+E GV +GGCC + +I+++ + +I + ++ N+
Sbjct: 1079 LETYLPQWVEMGVKFVGGCCRTNARDIKRIKKAVIGLYGSRSNE 1122
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 107/277 (38%), Positives = 153/277 (55%), Gaps = 25/277 (9%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
KV ++DG F++Q++ H +D PLW+S + T P A +ETH D+++AGAD I ++ YQ
Sbjct: 791 KVIVIDGGFSTQLTEHVGAKLDKDPLWTSRFNATNPAAVLETHLDYLKAGADCILTNTYQ 850
Query: 66 ANVDN-LTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
A+++ + L +E E+L L+ SV+L A+ + N + + G SI
Sbjct: 851 ASIEGYMDFLDLNEDESLKLIRASVELARRARTRYLAEKLENKSHKIPWVVG------SI 904
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSEY+G Y + + L WHRP + A+V AGVD LA+ETIP EA AL+
Sbjct: 905 GPYGAHLHDGSEYTGAYAEHVPANRLQKWHRPRINAIVEAGVDALAIETIPCRMEAEALL 964
Query: 185 KLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSC-----LLANPDQIQAIGVNCVRP 238
LL + P + W+SF C+D +HGE + V LANP+ + AIGVNCV P
Sbjct: 965 DLLSADHPTVRFWISFQCRDGASLAHGENFAETVLGLWNRARQLANPN-LLAIGVNCVNP 1023
Query: 239 SHVSTLVRCIKQ-----------SHPTVQTIVYPNKG 264
HV L+R + + + IVYPN G
Sbjct: 1024 QHVLPLLRSVHELLQQRAAGTPPESERIPLIVYPNSG 1060
>gi|158296509|ref|XP_316898.4| AGAP008537-PA [Anopheles gambiae str. PEST]
gi|157014744|gb|EAA12151.5| AGAP008537-PA [Anopheles gambiae str. PEST]
Length = 333
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 120/318 (37%), Positives = 170/318 (53%), Gaps = 22/318 (6%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V +LDG F +Q+S H K +DG PLWS+ + T+P A TH DF+ E A Y
Sbjct: 11 VTVLDGGFATQLSVHVGKSIDGDPLWSARFNATDPNAVFRTHLDFLEAGAE-AIMTNTYQ 69
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA-----AS 379
+ E+ ++ T +LI + V A +LA K + Q + AS
Sbjct: 70 ASIEGYVEHL--HLTEDTSLNLI---KSTVRVAQMARNHFLA--KGPTNEQRSVPLLVAS 122
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
IGPYG L DGSEY+G Y + + WHRP ++A + AGVD L +ETIP + EA AL
Sbjct: 123 IGPYGAHLHDGSEYTGRYAADVCADTIQKWHRPRIDACLEAGVDVLGIETIPCKMEAEAL 182
Query: 440 VKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA----NPDQIQAIGVNCVRP 494
+ +L E+P + W+SF CKD+ H ++GEL + V S + A+GVNCV P
Sbjct: 183 LDMLCDEYPTVRFWISFQCKDNQHLANGELFADTVNSLWAKARSRRAKNLLALGVNCVHP 242
Query: 495 SHVSTLVRCIKQSH-PTVQT--IVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGV 551
V+ L R + + P V+ IVYPN G V+ +V W ED + HYVPQW++ G
Sbjct: 243 QIVTPLFRSVNEKKLPAVRIPLIVYPNSGEVY-TVEDGWQGREDCVPLEHYVPQWIDLGA 301
Query: 552 NIIGGCCEVTSYEIQQMR 569
IGGCC + +IQ+++
Sbjct: 302 RFIGGCCRTYARDIQRIK 319
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 155/272 (56%), Gaps = 15/272 (5%)
Query: 2 SKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQS 61
+ + V +LDG F +Q+S H K +DG PLWS+ + T+P A TH DF+ AGA+ I +
Sbjct: 6 TTMTNVTVLDGGFATQLSVHVGKSIDGDPLWSARFNATDPNAVFRTHLDFLEAGAEAIMT 65
Query: 62 SCYQANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIET 120
+ YQA+++ + L +E +L+L+ +V++ A++ N ++ LL
Sbjct: 66 NTYQASIEGYVEHLHLTEDTSLNLIKSTVRVAQMARNHFLAKGPTNEQRSVPLLV----- 120
Query: 121 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 180
ASIGPYG L DGSEY+G Y + + WHRP ++A + AGVD L +ETIP + EA
Sbjct: 121 -ASIGPYGAHLHDGSEYTGRYAADVCADTIQKWHRPRIDACLEAGVDVLGIETIPCKMEA 179
Query: 181 LALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA----NPDQIQAIGVNC 235
AL+ +L E+P + W+SF CKD+ H ++GEL + V S + A+GVNC
Sbjct: 180 EALLDMLCDEYPTVRFWISFQCKDNQHLANGELFADTVNSLWAKARSRRAKNLLALGVNC 239
Query: 236 VRPSHVSTLVRCIKQSH-PTVQT--IVYPNKG 264
V P V+ L R + + P V+ IVYPN G
Sbjct: 240 VHPQIVTPLFRSVNEKKLPAVRIPLIVYPNSG 271
>gi|345495637|ref|XP_001605767.2| PREDICTED: homocysteine S-methyltransferase-like [Nasonia
vitripennis]
Length = 323
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 113/297 (38%), Positives = 163/297 (54%), Gaps = 36/297 (12%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
VK++DG F++Q+ H + +DG PLW+S +L + P+A +TH D++RAG+ +I+++ YQA
Sbjct: 5 VKVIDGGFSTQLVTHVGEVIDGDPLWTSRFLYSNPDAVFQTHLDYLRAGSHVIETATYQA 64
Query: 67 NVDNLTK-LGYSEQEALDLLHKSVQLMNSA----------KDKENQTPDINLNKTFNLLT 115
++ K L +E+EAL L+ +V+L A KD N P +
Sbjct: 65 SIPGYVKYLDRTEEEALQLIKTAVELAKKAVRVYKEEIKGKDVSNPEPMV---------- 114
Query: 116 GHIETAASIGPYGTVLRDGSEYSG-HYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI 174
A SIGPY L D SEY+G Y + + ++ WHRP EAL+ GVD LA+ETI
Sbjct: 115 -----AGSIGPYAAYLHDCSEYTGGSYANIESMDSIVEWHRPRFEALINGGVDLLAIETI 169
Query: 175 PAEKEALALVKLLREFPGQKAWLSFSCK-DDTHTSHGELISSAVTSCLLANPDQIQAIGV 233
P +EA ALV LL+++P KAWLSFSCK D + G V C A QI A GV
Sbjct: 170 PCAREAEALVGLLKQYPDTKAWLSFSCKVDGKSIADGSSFKQTVLKCYKAASGQIVACGV 229
Query: 234 NCVRPSHVSTLVRCI--KQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHP 288
NC+ P V+ L++ I K+ + + + YPN G K +F+ + D D HP
Sbjct: 230 NCLAPRSVTPLLKSINEKEINQFIPMVAYPNSGEKYSSTTFSWTI------DNDFHP 280
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 120/318 (37%), Positives = 167/318 (52%), Gaps = 26/318 (8%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETA---A 318
VK++DG F++Q+ H + +DG PLW+S +L + P+A +TH D++R IETA A
Sbjct: 5 VKVIDGGFSTQLVTHVGEVIDGDPLWTSRFLYSNPDAVFQTHLDYLRAGSHVIETATYQA 64
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--- 375
SI Y Y+D TE + + + VE +A Y IK S
Sbjct: 65 SIPGYV-----------KYLDR-TEEEALQLIKTAVELAKKAVRVYKEEIKGKDVSNPEP 112
Query: 376 -TAASIGPYGTVLRDGSEYSG-HYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
A SIGPY L D SEY+G Y + + ++ WHRP EAL+ GVD LA+ETIP
Sbjct: 113 MVAGSIGPYAAYLHDCSEYTGGSYANIESMDSIVEWHRPRFEALINGGVDLLAIETIPCA 172
Query: 434 KEALALVKLLREFPGQKAWLSFSCK-DDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 492
+EA ALV LL+++P KAWLSFSCK D + G V C A QI A GVNC+
Sbjct: 173 REAEALVGLLKQYPDTKAWLSFSCKVDGKSIADGSSFKQTVLKCYKAASGQIVACGVNCL 232
Query: 493 RPSHVSTLVRCI--KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEG 550
P V+ L++ I K+ + + + YPN G + S W D + +V WL+ G
Sbjct: 233 APRSVTPLLKSINEKEINQFIPMVAYPNSGEKYSSTTFSWTIDNDFHPPEEFVKDWLDIG 292
Query: 551 VNIIGGCCEVTSYEIQQM 568
V IG CC S +I+++
Sbjct: 293 VRYIGSCCRTGSKDIERI 310
>gi|260796187|ref|XP_002593086.1| hypothetical protein BRAFLDRAFT_114091 [Branchiostoma floridae]
gi|229278310|gb|EEN49097.1| hypothetical protein BRAFLDRAFT_114091 [Branchiostoma floridae]
Length = 315
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 157/272 (57%), Gaps = 16/272 (5%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ K+LDG +++ D++ PLWS+ L T P A + H+ F+ AG+D+I ++ YQ
Sbjct: 2 ETKVLDGGLATELDFAGF-DINNDPLWSARLLATNPAAIKQVHKSFLSAGSDVIITATYQ 60
Query: 66 ANVDNLTK-LGYSEQEALDLLHKSVQLMNSA---KDKENQTPDINLNKTFNLLTGHIETA 121
A+V + LG S +EA L+ V++ A KE D + N L A
Sbjct: 61 ASVPGFQEYLGVSVEEAHKLMDHGVRIAKQACLEFCKEQDKGDFPGRR--NPLA-----A 113
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
S+GPYG L D SEY+G YVDSM+ +L WHRP + L+ +G D +A+ETIPA KEA
Sbjct: 114 GSVGPYGACLHDASEYTGEYVDSMSIEELQRWHRPRLGQLITSGADMVAIETIPAVKEAA 173
Query: 182 ALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 241
ALV+LLREFP +AW++FSCKD HT HGE A+ + +L +P Q+ A G NC P HV
Sbjct: 174 ALVQLLREFPNTRAWVTFSCKDGLHTCHGESFPEAIAA-VLKSP-QVFAAGANCCMPEHV 231
Query: 242 STLVRCIKQ--SHPTVQTIVYPNKGVKLLDGS 271
+ L++ ++ P I YPN G K G+
Sbjct: 232 APLLQKARELCKDPAKFFIAYPNSGEKWAAGT 263
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 168/318 (52%), Gaps = 17/318 (5%)
Query: 266 KLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGT 325
K+LDG +++ D++ PLWS+ L T P A + H+ F+ + + Y
Sbjct: 4 KVLDGGLATELDFAGF-DINNDPLWSARLLATNPAAIKQVHKSFLSAGSDVIIT-ATYQA 61
Query: 326 VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL-----ALIKPSISSQTAASI 380
+ EY G V+ EA + H V +A +++ + A S+
Sbjct: 62 SVPGFQEYLGVSVE---EAHKLMDH--GVRIAKQACLEFCKEQDKGDFPGRRNPLAAGSV 116
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GPYG L D SEY+G YVDSM+ +L WHRP + L+ +G D +A+ETIPA KEA ALV
Sbjct: 117 GPYGACLHDASEYTGEYVDSMSIEELQRWHRPRLGQLITSGADMVAIETIPAVKEAAALV 176
Query: 441 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 500
+LLREFP +AW++FSCKD HT HGE A+ + +L +P Q+ A G NC P HV+ L
Sbjct: 177 QLLREFPNTRAWVTFSCKDGLHTCHGESFPEAIAA-VLKSP-QVFAAGANCCMPEHVAPL 234
Query: 501 VRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
++ ++ P I YPN G W + W D + +VP+WL+ G IGGCC
Sbjct: 235 LQKARELCKDPAKFFIAYPNSGEKW-AAGTGWHGKADCRPLSTFVPEWLDHGARWIGGCC 293
Query: 559 EVTSYEIQQMRIMIDEFN 576
+I+ +R I+++
Sbjct: 294 RTRPDDIKDIRSSIEQWK 311
>gi|223967967|emb|CAR93714.1| CG10623-PA [Drosophila melanogaster]
Length = 331
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 174/320 (54%), Gaps = 19/320 (5%)
Query: 270 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRD 329
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R + + Y + +
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILT-NTYQSSVEG 77
Query: 330 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---TAASIGPYGTV 386
+Y G V +LI + +V+ +A YL+ I S SIGPYG
Sbjct: 78 FVKYLG--VTRERGVELI---QKSVQLAKQAKEQYLSEIGSEAESALPLIMGSIGPYGAY 132
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 445
L DGSEY+G+Y D M++ +L AWH+ +E + AGVD LALET+P EA A+ +L L +
Sbjct: 133 LHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDK 192
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 500
FP K W+S C D+ H + GE + A S +++ IGVNCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGVNCVNPLFVTPL 252
Query: 501 VRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
+ + + + +VY N+G ++D W T +E ++ +VP+W++ GV I+GGCC
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDWTGTGEE--VVKFVPEWIQLGVRIVGGCC 310
Query: 559 EVTSYEIQQMRIMIDEFNTK 578
V + ++ +R +D N K
Sbjct: 311 RVYTTDVLAIRKYVDGLNIK 330
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 151/262 (57%), Gaps = 15/262 (5%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL 71
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R GADII ++ YQ++V+
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 72 TK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
K LG + + ++L+ KSVQL AK++ L+ G SIGPYG
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQAKEQYLSEIGSEAESALPLIMG------SIGPYGAY 132
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 189
L DGSEY+G+Y D M++ +L AWH+ +E + AGVD LALET+P EA A+ +L L +
Sbjct: 133 LHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDK 192
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 244
FP K W+S C D+ H + GE + A S +++ IGVNCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGVNCVNPLFVTPL 252
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ + + + +VY N+G
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRG 274
>gi|223967965|emb|CAR93713.1| CG10623-PA [Drosophila melanogaster]
Length = 331
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 172/320 (53%), Gaps = 19/320 (5%)
Query: 270 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRD 329
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R + + Y + +
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILT-NTYQSSVEG 77
Query: 330 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---TAASIGPYGTV 386
+Y G V +LI + +V+ +A YL+ I S SIGPYG
Sbjct: 78 FVKYLG--VTRERGVELI---QKSVQLAKQAKEQYLSEIGSEAESALPLIMGSIGPYGAY 132
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 445
L DGSEY+G+Y D M++ +L AWH+ +E + AGVD LALET+P EA A+ +L L
Sbjct: 133 LHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDN 192
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 500
FP K W+S C D+ H + GE + A S +++ IGVNCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGVNCVNPLFVTPL 252
Query: 501 VRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
+ + + + +VY N+G ++D W T +E ++ +VP+W++ GV I+GGCC
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDWTGTGEE--VVKFVPEWIQLGVRIVGGCC 310
Query: 559 EVTSYEIQQMRIMIDEFNTK 578
V ++ +R +D N K
Sbjct: 311 RVYPTDVLAIRKYVDGLNIK 330
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 150/262 (57%), Gaps = 15/262 (5%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL 71
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R GADII ++ YQ++V+
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 72 TK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
K LG + + ++L+ KSVQL AK++ L+ G SIGPYG
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQAKEQYLSEIGSEAESALPLIMG------SIGPYGAY 132
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 189
L DGSEY+G+Y D M++ +L AWH+ +E + AGVD LALET+P EA A+ +L L
Sbjct: 133 LHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDN 192
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 244
FP K W+S C D+ H + GE + A S +++ IGVNCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGVNCVNPLFVTPL 252
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ + + + +VY N+G
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRG 274
>gi|116806416|emb|CAL25782.1| CG10623 [Drosophila melanogaster]
Length = 331
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 173/320 (54%), Gaps = 19/320 (5%)
Query: 270 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRD 329
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R + + Y + +
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILT-NTYQSSVEG 77
Query: 330 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---TAASIGPYGTV 386
+Y G V +LI + +V+ +A YL+ I S SIGPYG
Sbjct: 78 FVKYLG--VTRERGVELI---QKSVQLAKQAKEQYLSEIGSEAESALPLIMGSIGPYGAY 132
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 445
L DGSEY+G+Y D M++ +L AWH+ +E + AGVD LALET+P EA A+ +L L +
Sbjct: 133 LHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDK 192
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 500
FP K W+S C D+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 501 VRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
+ + + + +VY N+G ++D W T +E ++ +VP+W++ GV I+GGCC
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDWTGTGEE--VVKFVPEWIQLGVRIVGGCC 310
Query: 559 EVTSYEIQQMRIMIDEFNTK 578
V ++ +R +D N K
Sbjct: 311 RVYPTDVLAIRKYVDGLNIK 330
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/262 (38%), Positives = 151/262 (57%), Gaps = 15/262 (5%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL 71
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R GADII ++ YQ++V+
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 72 TK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
K LG + + ++L+ KSVQL AK++ L+ G SIGPYG
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQAKEQYLSEIGSEAESALPLIMG------SIGPYGAY 132
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 189
L DGSEY+G+Y D M++ +L AWH+ +E + AGVD LALET+P EA A+ +L L +
Sbjct: 133 LHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDK 192
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 244
FP K W+S C D+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ + + + +VY N+G
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRG 274
>gi|116806400|emb|CAL25774.1| CG10623 [Drosophila melanogaster]
gi|116806404|emb|CAL25776.1| CG10623 [Drosophila melanogaster]
gi|116806408|emb|CAL25778.1| CG10623 [Drosophila melanogaster]
gi|223967959|emb|CAR93710.1| CG10623-PA [Drosophila melanogaster]
gi|223967977|emb|CAR93719.1| CG10623-PA [Drosophila melanogaster]
Length = 331
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 173/320 (54%), Gaps = 19/320 (5%)
Query: 270 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRD 329
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R + + Y + +
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILT-NTYQSSVEG 77
Query: 330 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---TAASIGPYGTV 386
+Y G V +LI + +V+ +A YL+ I S SIGPYG
Sbjct: 78 FVKYLG--VTRERGVELI---QKSVQLAKQAKEQYLSEIGSEAESALPLIMGSIGPYGAY 132
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 445
L DGSEY+G+Y D M++ +L AWH+ +E + AGVD LALET+P EA A+ +L L +
Sbjct: 133 LHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDK 192
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 500
FP K W+S C D+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 501 VRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
+ + + + +VY N+G ++D W T +E ++ +VP+W++ GV I+GGCC
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDWTGTGEE--VVKFVPEWIQLGVRIVGGCC 310
Query: 559 EVTSYEIQQMRIMIDEFNTK 578
V ++ +R +D N K
Sbjct: 311 RVYPTDVLAIRKYVDGLNIK 330
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/262 (38%), Positives = 151/262 (57%), Gaps = 15/262 (5%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL 71
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R GADII ++ YQ++V+
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 72 TK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
K LG + + ++L+ KSVQL AK++ L+ G SIGPYG
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQAKEQYLSEIGSEAESALPLIMG------SIGPYGAY 132
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 189
L DGSEY+G+Y D M++ +L AWH+ +E + AGVD LALET+P EA A+ +L L +
Sbjct: 133 LHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDK 192
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 244
FP K W+S C D+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ + + + +VY N+G
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRG 274
>gi|45360513|ref|NP_988891.1| uncharacterized protein LOC394486 [Xenopus (Silurana) tropicalis]
gi|37589988|gb|AAH59753.1| hypothetical protein MGC75760 [Xenopus (Silurana) tropicalis]
Length = 307
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 163/305 (53%), Gaps = 15/305 (4%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
VK+L G ++++ + G PLWS+ L T P+A H F++ E S Y
Sbjct: 5 VKILSGGLSTELENSGFL-LQGDPLWSARLLQTNPQAIKNVHTSFLKSGAEVL-STATYQ 62
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
++ E+ G +D + E + VR + A IK + + A SIGPYG
Sbjct: 63 ASVKGFQEHLGLSIDEVAELFHVG---------VRLAKEAAAEIKDNRNILIAGSIGPYG 113
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
L DGSEY+G+Y+ +M+ +L WHR ++ L AG++ ALETIP +KEA AL++LLR
Sbjct: 114 AFLSDGSEYTGNYLRNMSVEELKDWHRLQMQCLASAGIELFALETIPGQKEAEALLELLR 173
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 504
EFP AWLS+SC+D + TS+G+ AV + Q+ A+G+NC P+ VS+L+
Sbjct: 174 EFPNTNAWLSYSCRDMSSTSYGDAFEKAVG--IAHKSKQLVAVGMNCCPPTFVSSLLTSA 231
Query: 505 KQSHPT-VQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
++ + IVYPN G +WD ++ W E ++ Y +W+ G IGGCC T
Sbjct: 232 NKNRGLDIGWIVYPNSGKIWDH-NLGWQGGGTEKTLSEYALEWVNLGAKWIGGCCTTTPS 290
Query: 564 EIQQM 568
I +
Sbjct: 291 AIATL 295
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/316 (35%), Positives = 172/316 (54%), Gaps = 27/316 (8%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
VK+L G ++++ + G PLWS+ L T P+A H F+++GA+++ ++ YQA
Sbjct: 5 VKILSGGLSTELENSGFL-LQGDPLWSARLLQTNPQAIKNVHTSFLKSGAEVLSTATYQA 63
Query: 67 NVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
+V + LG S E +L H V+L A +I N+ +I A SIG
Sbjct: 64 SVKGFQEHLGLSIDEVAELFHVGVRLAKEA------AAEIKDNR-------NILIAGSIG 110
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY+G+Y+ +M+ +L WHR ++ L AG++ ALETIP +KEA AL++
Sbjct: 111 PYGAFLSDGSEYTGNYLRNMSVEELKDWHRLQMQCLASAGIELFALETIPGQKEAEALLE 170
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
LLREFP AWLS+SC+D + TS+G+ AV + Q+ A+G+NC P+ VS+L+
Sbjct: 171 LLREFPNTNAWLSYSCRDMSSTSYGDAFEKAVG--IAHKSKQLVAVGMNCCPPTFVSSLL 228
Query: 246 RCIKQSHPT-VQTIVYPNKGVKLLD-------GSFTSQVSRHTIKDVDGHPLWSSVYLTT 297
++ + IVYPN G K+ D G +S + ++ V+ W TT
Sbjct: 229 TSANKNRGLDIGWIVYPNSG-KIWDHNLGWQGGGTEKTLSEYALEWVNLGAKWIGGCCTT 287
Query: 298 EPEACVETHRDFIRGH 313
P A + T +R H
Sbjct: 288 TPSA-IATLLQTLRPH 302
>gi|24585077|ref|NP_609921.1| CG10623 [Drosophila melanogaster]
gi|7298507|gb|AAF53726.1| CG10623 [Drosophila melanogaster]
gi|21430108|gb|AAM50732.1| GM29503p [Drosophila melanogaster]
gi|116806402|emb|CAL25775.1| CG10623 [Drosophila melanogaster]
gi|116806406|emb|CAL25777.1| CG10623 [Drosophila melanogaster]
gi|116806410|emb|CAL25779.1| CG10623 [Drosophila melanogaster]
gi|116806412|emb|CAL25780.1| CG10623 [Drosophila melanogaster]
gi|220950070|gb|ACL87578.1| CG10623-PA [synthetic construct]
gi|220959080|gb|ACL92083.1| CG10623-PA [synthetic construct]
gi|223967969|emb|CAR93715.1| CG10623-PA [Drosophila melanogaster]
gi|223967973|emb|CAR93717.1| CG10623-PA [Drosophila melanogaster]
Length = 331
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 172/320 (53%), Gaps = 19/320 (5%)
Query: 270 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRD 329
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R + + Y + +
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILT-NTYQSSVEG 77
Query: 330 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---TAASIGPYGTV 386
+Y G V +LI + +V+ +A YL+ I S SIGPYG
Sbjct: 78 FVKYLG--VTRERGVELI---QKSVQLAKQAKEQYLSEIGSEAESALPLIMGSIGPYGAY 132
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 445
L DGSEY+G+Y D M++ +L AWH+ +E + AGVD LALET+P EA A+ +L L
Sbjct: 133 LHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDN 192
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 500
FP K W+S C D+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 501 VRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
+ + + + +VY N+G ++D W T +E ++ +VP+W++ GV I+GGCC
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDWTGTGEE--VVKFVPEWIQLGVRIVGGCC 310
Query: 559 EVTSYEIQQMRIMIDEFNTK 578
V ++ +R +D N K
Sbjct: 311 RVYPTDVLAIRKYVDGLNIK 330
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/262 (38%), Positives = 150/262 (57%), Gaps = 15/262 (5%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL 71
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R GADII ++ YQ++V+
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 72 TK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
K LG + + ++L+ KSVQL AK++ L+ G SIGPYG
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQAKEQYLSEIGSEAESALPLIMG------SIGPYGAY 132
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 189
L DGSEY+G+Y D M++ +L AWH+ +E + AGVD LALET+P EA A+ +L L
Sbjct: 133 LHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDN 192
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 244
FP K W+S C D+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ + + + +VY N+G
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRG 274
>gi|223967961|emb|CAR93711.1| CG10623-PA [Drosophila melanogaster]
Length = 331
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 172/320 (53%), Gaps = 19/320 (5%)
Query: 270 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRD 329
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R + + Y + +
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILT-NTYQSSVEG 77
Query: 330 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---TAASIGPYGTV 386
+Y G V +LI + +V+ +A YL+ I S SIGPYG
Sbjct: 78 FVKYLG--VTRERGVELI---QKSVQLAKQAKEQYLSEIGSEAESALPLIMGSIGPYGAY 132
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 445
L DGSEY+G+Y D M++ +L AWH+ +E + AGVD LALET+P EA A+ +L L
Sbjct: 133 LHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDN 192
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 500
FP K W+S C D+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 501 VRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
+ + + + +VY N+G ++D W T +E ++ +VP+W++ GV I+GGCC
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDWTGTGEE--VVKFVPEWIQLGVRIVGGCC 310
Query: 559 EVTSYEIQQMRIMIDEFNTK 578
V ++ +R +D N K
Sbjct: 311 RVYPTDVFAIRKYVDGLNIK 330
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/262 (38%), Positives = 150/262 (57%), Gaps = 15/262 (5%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL 71
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R GADII ++ YQ++V+
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 72 TK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
K LG + + ++L+ KSVQL AK++ L+ G SIGPYG
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQAKEQYLSEIGSEAESALPLIMG------SIGPYGAY 132
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 189
L DGSEY+G+Y D M++ +L AWH+ +E + AGVD LALET+P EA A+ +L L
Sbjct: 133 LHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDN 192
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 244
FP K W+S C D+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ + + + +VY N+G
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRG 274
>gi|116806396|emb|CAL25772.1| CG10623 [Drosophila melanogaster]
Length = 331
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 173/320 (54%), Gaps = 19/320 (5%)
Query: 270 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRD 329
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R + + Y + +
Sbjct: 19 GGFSSQLAKNVSEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILT-NTYQSSVEG 77
Query: 330 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---TAASIGPYGTV 386
+Y G V +LI + +V+ +A YL+ I S SIGPYG
Sbjct: 78 FVKYLG--VTRERGVELI---QKSVQLAKQAKEQYLSEIGSEAESALPLIMGSIGPYGAY 132
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 445
L DGSEY+G+Y D M++ +L AWH+ +E + AGVD LALET+P EA A+ +L L +
Sbjct: 133 LHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDK 192
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 500
FP K W+S C D+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 501 VRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
+ + + + +VY N+G ++D W T +E ++ +VP+W++ GV I+GGCC
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDWTGTGEE--VVKFVPEWIQLGVRIVGGCC 310
Query: 559 EVTSYEIQQMRIMIDEFNTK 578
V ++ +R +D N K
Sbjct: 311 RVYPTDVLAIRKYVDGLNIK 330
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/262 (38%), Positives = 151/262 (57%), Gaps = 15/262 (5%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL 71
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R GADII ++ YQ++V+
Sbjct: 19 GGFSSQLAKNVSEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 72 TK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
K LG + + ++L+ KSVQL AK++ L+ G SIGPYG
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQAKEQYLSEIGSEAESALPLIMG------SIGPYGAY 132
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 189
L DGSEY+G+Y D M++ +L AWH+ +E + AGVD LALET+P EA A+ +L L +
Sbjct: 133 LHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDK 192
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 244
FP K W+S C D+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ + + + +VY N+G
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRG 274
>gi|195484287|ref|XP_002090630.1| GE12692 [Drosophila yakuba]
gi|194176731|gb|EDW90342.1| GE12692 [Drosophila yakuba]
Length = 331
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 177/318 (55%), Gaps = 20/318 (6%)
Query: 4 ICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+ +V L DG F +Q++ H VDG PLWSS + T P A + TH DF++ GADII ++
Sbjct: 3 LTRVLLKDGGFGTQMTVHVGDSVDGDPLWSSRFNATNPAAIISTHLDFLQNGADIILTNT 62
Query: 64 YQANVDN-LTKLGYSEQEALDLLHKSVQLMNSAKDK---ENQTPDINLNKTFNLLTGHIE 119
YQ++VD + L E+++++L+ +V+L + AK++ E + + + + L+
Sbjct: 63 YQSSVDGYMEYLELDEEQSIELIRNTVRLAHIAKERYLTECYQAQLAMPEGYPLII---- 118
Query: 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 179
ASIGP+G L DGSEY+G Y D + ++ WHR +EA + AGVD LA+ETIP + E
Sbjct: 119 --ASIGPFGAHLHDGSEYTGSYADYVPAKEITDWHRVRIEACLEAGVDALAIETIPCQME 176
Query: 180 ALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLAN---PDQIQAIGV 233
A ALV++L ++P K W++F CKD+ +HGE + A + LLA D+ AIGV
Sbjct: 177 AEALVEMLCDDYPDVKFWVAFQCKDENTLAHGETFADATNAIWDLLAERNAQDKCLAIGV 236
Query: 234 NCVRPSHVSTLVRCI---KQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLW 290
NCV P V+ L + + ++ + +VYPN G ++ D Q H + + P W
Sbjct: 237 NCVHPKFVTPLFKSLNGDREVGEQIPLVVYPNSG-EVYDVVNGWQGKEHCVPLANYVPEW 295
Query: 291 SSVYLTTEPEACVETHRD 308
+ + C RD
Sbjct: 296 AQLGAKVIGGCCRTYARD 313
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 119/331 (35%), Positives = 172/331 (51%), Gaps = 24/331 (7%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIET------AA 318
V L DG F +Q++ H VDG PLWSS + T P A + TH DF++ + +
Sbjct: 6 VLLKDGGFGTQMTVHVGDSVDGDPLWSSRFNATNPAAIISTHLDFLQNGADIILTNTYQS 65
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA-LIKPSISSQTA 377
S+ Y L E S + + IA R E Y A L P
Sbjct: 66 SVDGYMEYLELDEEQSIELIRNTVRLAHIAKERYLTEC-------YQAQLAMPEGYPLII 118
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
ASIGP+G L DGSEY+G Y D + ++ WHR +EA + AGVD LA+ETIP + EA
Sbjct: 119 ASIGPFGAHLHDGSEYTGSYADYVPAKEITDWHRVRIEACLEAGVDALAIETIPCQMEAE 178
Query: 438 ALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLAN---PDQIQAIGVNC 491
ALV++L ++P K W++F CKD+ +HGE + A + LLA D+ AIGVNC
Sbjct: 179 ALVEMLCDDYPDVKFWVAFQCKDENTLAHGETFADATNAIWDLLAERNAQDKCLAIGVNC 238
Query: 492 VRPSHVSTLVRCI---KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLE 548
V P V+ L + + ++ + +VYPN G V+D V+ W E + +YVP+W +
Sbjct: 239 VHPKFVTPLFKSLNGDREVGEQIPLVVYPNSGEVYDVVN-GWQGKEHCVPLANYVPEWAQ 297
Query: 549 EGVNIIGGCCEVTSYEIQQMRIMIDEFNTKK 579
G +IGGCC + +++ + I ++N K
Sbjct: 298 LGAKVIGGCCRTYARDVRHIGEAIRDWNKLK 328
>gi|384048566|ref|YP_005496583.1| Homocysteine S-methyltransferase ybgG [Bacillus megaterium WSH-002]
gi|345446257|gb|AEN91274.1| Homocysteine S-methyltransferase ybgG [Bacillus megaterium WSH-002]
Length = 311
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 106/258 (41%), Positives = 152/258 (58%), Gaps = 13/258 (5%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG+ +++ R+ D LWS+ L +PE H+D+ AGAD ++ YQ+
Sbjct: 13 VIVLDGAMATELERYGCDLNDS--LWSAKVLMEQPELIKRVHQDYFAAGADCAITASYQS 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ K G SE EA +L+ SV++ A+D+ Q + LN+ ++ AAS+GP
Sbjct: 71 TFEGFAKRGLSEAEARELIQASVKIAAEARDEFWQQEENRLNRPKPIV------AASVGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L +GSEY+G Y +TE +L+ +HRP ++AL+ AG D LA ETIP EA A+ +L
Sbjct: 125 YGAFLANGSEYTGQY--DVTEEELMEFHRPRMKALIEAGADVLACETIPNVMEARAIARL 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L EF G AW++FS KDD H S G LIS L + +QI A+GVNC P ++S+L++
Sbjct: 183 LEEFEGAYAWITFSAKDDLHISSGTLISECAR--YLNSYEQIAALGVNCTPPQYISSLIK 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
IK S IVYPN G
Sbjct: 241 EIK-SQTDKPVIVYPNSG 257
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 159/309 (51%), Gaps = 25/309 (8%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V +LDG+ +++ R+ D LWS+ L +PE H+D+ + A +
Sbjct: 13 VIVLDGAMATELERYGCDLNDS--LWSAKVLMEQPELIKRVHQDYFAAGADCAITASYQS 70
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY-------LALIKPSISSQTA 377
T + G ++EA+ + +V+ A ++ L KP + A
Sbjct: 71 T-------FEGFAKRGLSEAEARELIQASVKIAAEARDEFWQQEENRLNRPKPIV----A 119
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
AS+GPYG L +GSEY+G Y +TE +L+ +HRP ++AL+ AG D LA ETIP EA
Sbjct: 120 ASVGPYGAFLANGSEYTGQY--DVTEEELMEFHRPRMKALIEAGADVLACETIPNVMEAR 177
Query: 438 ALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
A+ +LL EF G AW++FS KDD H S G LIS L + +QI A+GVNC P ++
Sbjct: 178 AIARLLEEFEGAYAWITFSAKDDLHISSGTLISECAR--YLNSYEQIAALGVNCTPPQYI 235
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
S+L++ IK S IVYPN G +D+ W T + W E G +IGGC
Sbjct: 236 SSLIKEIK-SQTDKPVIVYPNSGEHYDAESKTWNGTSAGETYGCSAHSWYEAGAQLIGGC 294
Query: 558 CEVTSYEIQ 566
C T +I+
Sbjct: 295 CRTTPDDIK 303
>gi|328711356|ref|XP_001945392.2| PREDICTED: homocysteine S-methyltransferase-like isoform 1
[Acyrthosiphon pisum]
Length = 336
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 161/295 (54%), Gaps = 30/295 (10%)
Query: 6 KVKLLDGSFTSQVSRHTIKD-VDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
K+ LLDGSF S + + D V HPLW S + EA V+ HRD+IRAGA+ + ++ Y
Sbjct: 33 KMYLLDGSFISGILPYVEYDSVMKHPLWGSNLIFNNEEAVVKAHRDYIRAGAEFLTTNTY 92
Query: 65 QANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
QA+++ K L + ++ L+ KSV + A +E+ I + S
Sbjct: 93 QASIEGFQKYLNLNYDQSFQLIKKSVTICRRAIMEESSGRTIRI-------------MGS 139
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY+G+Y+ + DL WH+P ++ALV AGVD + ETIP+ EA L
Sbjct: 140 VGPYGASLCDGSEYNGNYIGKIDSKDLYDWHKPRIQALVEAGVDVVLFETIPSIIEANIL 199
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIGVNCVRPSHVS 242
+ +L E+P QKA LSFSCKD H SHGE +SAV + Q+ AIG+NC+ P ++
Sbjct: 200 LNILAEYPNQKACLSFSCKDSEHLSHGETFASAVEKFWTNDSRKQLIAIGMNCMDPQLIT 259
Query: 243 TLVRCIKQSHPTVQTIVYPNKG------VKLLDGSFTSQVSRHTIKDVDGHPLWS 291
L+ +K + V I YPN G K D + QVS +D LWS
Sbjct: 260 PLLTSVKTEN--VNFITYPNGGGVWDAVKKCWDNTQMYQVS------IDDLNLWS 306
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 151/368 (41%), Gaps = 114/368 (30%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKD-VDGHPLWSSVYLTTEPEACVETHRDFIRGH------- 313
N + LLDGSF S + + D V HPLW S + EA V+ HRD+IR
Sbjct: 31 NMKMYLLDGSFISGILPYVEYDSVMKHPLWGSNLIFNNEEAVVKAHRDYIRAGAEFLTTN 90
Query: 314 -------------------------------------------IETAASIGPYGTVLRDG 330
I S+GPYG L DG
Sbjct: 91 TYQASIEGFQKYLNLNYDQSFQLIKKSVTICRRAIMEESSGRTIRIMGSVGPYGASLCDG 150
Query: 331 SEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDG 390
SEY+G+Y+ + DL WH+P ++ALV AGVD + +T SI +L
Sbjct: 151 SEYNGNYIGKIDSKDLYDWHKPRIQALVEAGVDVVLF-------ETIPSIIEANILLNIL 203
Query: 391 SEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQK 450
+EY PN QK
Sbjct: 204 AEY------------------PN-----------------------------------QK 210
Query: 451 AWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIGVNCVRPSHVSTLVRCIKQSHP 509
A LSFSCKD H SHGE +SAV + Q+ AIG+NC+ P ++ L+ +K +
Sbjct: 211 ACLSFSCKDSEHLSHGETFASAVEKFWTNDSRKQLIAIGMNCMDPQLITPLLTSVKTEN- 269
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMR 569
V I YPN GGVWD+V W +T+ + + W E+G+ IIGGCC EI ++R
Sbjct: 270 -VNFITYPNGGGVWDAVKKCWDNTQMYQVSIDDLNLWSEKGLKIIGGCCNTGVTEISRIR 328
Query: 570 IMIDEFNT 577
+ID ++
Sbjct: 329 NLIDNLSS 336
>gi|195580012|ref|XP_002079850.1| GD21796 [Drosophila simulans]
gi|194191859|gb|EDX05435.1| GD21796 [Drosophila simulans]
Length = 331
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 169/320 (52%), Gaps = 19/320 (5%)
Query: 270 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRD 329
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R + + Y + +
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILT-NTYQSSVEG 77
Query: 330 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---TAASIGPYGTV 386
+Y G V +LI + +V+ +A YL+ I S SIGPYG
Sbjct: 78 FMKYLG--VSRERGVELI---QKSVQLAKQAKEQYLSEIGSEADSALPLIMGSIGPYGAY 132
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 445
L DGSEY+G+Y D M++ L AWH +E + AGVD LALET+P EA A+ +L L
Sbjct: 133 LHDGSEYTGNYADKMSKEQLKAWHTARIEICLAAGVDGLALETLPCLMEAEAVTELVLDN 192
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 500
FP K W+S C D+ H + GE + A S +++ IG NCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGESFAEAALSLWRLVQSRKAENRLLGIGFNCVNPLFVTPL 252
Query: 501 VRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
+ + + + +VY N+G ++D W T +E ++ +VP+W++ GV I+GGCC
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDWTGTGEE--VIKFVPEWIQLGVRIVGGCC 310
Query: 559 EVTSYEIQQMRIMIDEFNTK 578
V ++ +R +D N K
Sbjct: 311 RVYPTDVLAIRKYVDGLNIK 330
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 148/262 (56%), Gaps = 15/262 (5%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL 71
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R GADII ++ YQ++V+
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 72 TK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
K LG S + ++L+ KSVQL AK++ + L+ G SIGPYG
Sbjct: 79 MKYLGVSRERGVELIQKSVQLAKQAKEQYLSEIGSEADSALPLIMG------SIGPYGAY 132
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 189
L DGSEY+G+Y D M++ L AWH +E + AGVD LALET+P EA A+ +L L
Sbjct: 133 LHDGSEYTGNYADKMSKEQLKAWHTARIEICLAAGVDGLALETLPCLMEAEAVTELVLDN 192
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 244
FP K W+S C D+ H + GE + A S +++ IG NCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGESFAEAALSLWRLVQSRKAENRLLGIGFNCVNPLFVTPL 252
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ + + + +VY N+G
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRG 274
>gi|223967963|emb|CAR93712.1| CG10623-PA [Drosophila melanogaster]
gi|223967971|emb|CAR93716.1| CG10623-PA [Drosophila melanogaster]
Length = 331
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 173/320 (54%), Gaps = 19/320 (5%)
Query: 270 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRD 329
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R + + Y + +
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILT-NTYQSSVEG 77
Query: 330 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---TAASIGPYGTV 386
+Y G V +LI + +V+ +A YL+ I S SIGPYG
Sbjct: 78 FVKYLG--VTRERGVELI---QKSVQLAKQAKEQYLSEIGSEAESALPLIMGSIGPYGAY 132
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 445
L DGSEY+G+Y D M++ +L AWH+ +E + AGVD LALET+P EA A+ +L L +
Sbjct: 133 LHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDK 192
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 500
FP K W+S C D+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 501 VRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
+ + + + +VY N+G +++ W T +E ++ +VP+W++ GV I+GGCC
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRGEIYNVEQGDWTGTGEE--VVKFVPEWIQLGVRIVGGCC 310
Query: 559 EVTSYEIQQMRIMIDEFNTK 578
V ++ +R +D N K
Sbjct: 311 RVYPTDVLAIRKYVDGLNIK 330
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/262 (38%), Positives = 151/262 (57%), Gaps = 15/262 (5%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL 71
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R GADII ++ YQ++V+
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 72 TK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
K LG + + ++L+ KSVQL AK++ L+ G SIGPYG
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQAKEQYLSEIGSEAESALPLIMG------SIGPYGAY 132
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 189
L DGSEY+G+Y D M++ +L AWH+ +E + AGVD LALET+P EA A+ +L L +
Sbjct: 133 LHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDK 192
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 244
FP K W+S C D+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ + + + +VY N+G
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRG 274
>gi|116806418|emb|CAL25783.1| CG10623 [Drosophila melanogaster]
Length = 331
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 171/320 (53%), Gaps = 19/320 (5%)
Query: 270 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRD 329
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R + + Y + +
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILT-NTYQSSVEG 77
Query: 330 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---TAASIGPYGTV 386
+Y G V +LI + +V+ +A YL+ I S SIGPYG
Sbjct: 78 FVKYLG--VTRERGVELI---QKSVQLAKQAKEQYLSEIGSEAESALPLIMGSIGPYGAY 132
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 445
L DGSEY+G+Y D M++ +L AWH+ +E + AGVD LALET+P EA A+ +L L
Sbjct: 133 LHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDN 192
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 500
FP K W+S C D+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 501 VRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
+ + + + +VY N+G ++D W T +E ++ +VP+W+ GV I+GGCC
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDWTGTGEE--VVKFVPEWIHLGVRIVGGCC 310
Query: 559 EVTSYEIQQMRIMIDEFNTK 578
V ++ +R +D N K
Sbjct: 311 RVYPTDVLAIRKYVDGLNIK 330
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/262 (38%), Positives = 150/262 (57%), Gaps = 15/262 (5%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL 71
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R GADII ++ YQ++V+
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 72 TK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
K LG + + ++L+ KSVQL AK++ L+ G SIGPYG
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQAKEQYLSEIGSEAESALPLIMG------SIGPYGAY 132
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 189
L DGSEY+G+Y D M++ +L AWH+ +E + AGVD LALET+P EA A+ +L L
Sbjct: 133 LHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDN 192
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 244
FP K W+S C D+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ + + + +VY N+G
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRG 274
>gi|116806398|emb|CAL25773.1| CG10623 [Drosophila melanogaster]
gi|116806414|emb|CAL25781.1| CG10623 [Drosophila melanogaster]
Length = 331
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 172/320 (53%), Gaps = 19/320 (5%)
Query: 270 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRD 329
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R + + Y + +
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILT-NTYQSSVEG 77
Query: 330 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---TAASIGPYGTV 386
+Y G V +LI + +V+ +A YL+ I S SIGPYG
Sbjct: 78 FVKYLG--VTRERGVELI---QKSVQLAKQAKEQYLSEIGSEAESALPLIMGSIGPYGAY 132
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 445
L DGSEY+G+Y D +++ +L AWH+ +E + AGVD LALET+P EA A+ +L L
Sbjct: 133 LHDGSEYTGNYADKLSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDN 192
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 500
FP K W+S C D+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 501 VRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
+ + + + +VY N+G ++D W T +E ++ +VP+W++ GV I+GGCC
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDWTGTGEE--VVKFVPEWIQLGVRIVGGCC 310
Query: 559 EVTSYEIQQMRIMIDEFNTK 578
V ++ +R +D N K
Sbjct: 311 RVYPTDVLAIRKYVDGLNIK 330
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/262 (38%), Positives = 150/262 (57%), Gaps = 15/262 (5%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL 71
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R GADII ++ YQ++V+
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 72 TK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
K LG + + ++L+ KSVQL AK++ L+ G SIGPYG
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQAKEQYLSEIGSEAESALPLIMG------SIGPYGAY 132
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 189
L DGSEY+G+Y D +++ +L AWH+ +E + AGVD LALET+P EA A+ +L L
Sbjct: 133 LHDGSEYTGNYADKLSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDN 192
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 244
FP K W+S C D+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ + + + +VY N+G
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRG 274
>gi|328711354|ref|XP_003244518.1| PREDICTED: homocysteine S-methyltransferase-like isoform 2
[Acyrthosiphon pisum]
gi|328711358|ref|XP_003244519.1| PREDICTED: homocysteine S-methyltransferase-like isoform 3
[Acyrthosiphon pisum]
Length = 313
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 161/295 (54%), Gaps = 30/295 (10%)
Query: 6 KVKLLDGSFTSQVSRHTIKD-VDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
K+ LLDGSF S + + D V HPLW S + EA V+ HRD+IRAGA+ + ++ Y
Sbjct: 10 KMYLLDGSFISGILPYVEYDSVMKHPLWGSNLIFNNEEAVVKAHRDYIRAGAEFLTTNTY 69
Query: 65 QANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
QA+++ K L + ++ L+ KSV + A +E+ I + S
Sbjct: 70 QASIEGFQKYLNLNYDQSFQLIKKSVTICRRAIMEESSGRTIRI-------------MGS 116
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY+G+Y+ + DL WH+P ++ALV AGVD + ETIP+ EA L
Sbjct: 117 VGPYGASLCDGSEYNGNYIGKIDSKDLYDWHKPRIQALVEAGVDVVLFETIPSIIEANIL 176
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIGVNCVRPSHVS 242
+ +L E+P QKA LSFSCKD H SHGE +SAV + Q+ AIG+NC+ P ++
Sbjct: 177 LNILAEYPNQKACLSFSCKDSEHLSHGETFASAVEKFWTNDSRKQLIAIGMNCMDPQLIT 236
Query: 243 TLVRCIKQSHPTVQTIVYPNKG------VKLLDGSFTSQVSRHTIKDVDGHPLWS 291
L+ +K + V I YPN G K D + QVS +D LWS
Sbjct: 237 PLLTSVKTEN--VNFITYPNGGGVWDAVKKCWDNTQMYQVS------IDDLNLWS 283
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 151/368 (41%), Gaps = 114/368 (30%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKD-VDGHPLWSSVYLTTEPEACVETHRDFIRGH------- 313
N + LLDGSF S + + D V HPLW S + EA V+ HRD+IR
Sbjct: 8 NMKMYLLDGSFISGILPYVEYDSVMKHPLWGSNLIFNNEEAVVKAHRDYIRAGAEFLTTN 67
Query: 314 -------------------------------------------IETAASIGPYGTVLRDG 330
I S+GPYG L DG
Sbjct: 68 TYQASIEGFQKYLNLNYDQSFQLIKKSVTICRRAIMEESSGRTIRIMGSVGPYGASLCDG 127
Query: 331 SEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDG 390
SEY+G+Y+ + DL WH+P ++ALV AGVD + +T SI +L
Sbjct: 128 SEYNGNYIGKIDSKDLYDWHKPRIQALVEAGVDVVLF-------ETIPSIIEANILLNIL 180
Query: 391 SEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQK 450
+EY PN QK
Sbjct: 181 AEY------------------PN-----------------------------------QK 187
Query: 451 AWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIGVNCVRPSHVSTLVRCIKQSHP 509
A LSFSCKD H SHGE +SAV + Q+ AIG+NC+ P ++ L+ +K +
Sbjct: 188 ACLSFSCKDSEHLSHGETFASAVEKFWTNDSRKQLIAIGMNCMDPQLITPLLTSVKTEN- 246
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMR 569
V I YPN GGVWD+V W +T+ + + W E+G+ IIGGCC EI ++R
Sbjct: 247 -VNFITYPNGGGVWDAVKKCWDNTQMYQVSIDDLNLWSEKGLKIIGGCCNTGVTEISRIR 305
Query: 570 IMIDEFNT 577
+ID ++
Sbjct: 306 NLIDNLSS 313
>gi|195344948|ref|XP_002039038.1| GM17049 [Drosophila sechellia]
gi|194134168|gb|EDW55684.1| GM17049 [Drosophila sechellia]
Length = 331
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 170/320 (53%), Gaps = 19/320 (5%)
Query: 270 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRD 329
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R + + Y + +
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILT-NTYQSSVEG 77
Query: 330 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---TAASIGPYGTV 386
+Y G V +LI + +V+ +A YL+ I S SIGPYG
Sbjct: 78 FVKYLG--VTRERGVELI---QKSVQLAKQAKEQYLSEIGSEADSALPLIMGSIGPYGAY 132
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 445
L DGSEY+G+Y D M++ L AWH +E + AGVD LALET+P EA A+ +L L
Sbjct: 133 LHDGSEYTGNYADKMSKEQLKAWHTARIEICLAAGVDGLALETLPCLMEAEAVTELVLDN 192
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 500
FP K W+S C D+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGESFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 501 VRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
+ + + + +VY N+G ++D W T +E ++ +VP+W++ GV I+GGCC
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDWTGTGEE--VVKFVPEWIQLGVRIVGGCC 310
Query: 559 EVTSYEIQQMRIMIDEFNTK 578
V ++ +R +D N K
Sbjct: 311 RVYPTDVLAIRKYVDGLNIK 330
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 101/262 (38%), Positives = 149/262 (56%), Gaps = 15/262 (5%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL 71
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R GADII ++ YQ++V+
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 72 TK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
K LG + + ++L+ KSVQL AK++ + L+ G SIGPYG
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQAKEQYLSEIGSEADSALPLIMG------SIGPYGAY 132
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 189
L DGSEY+G+Y D M++ L AWH +E + AGVD LALET+P EA A+ +L L
Sbjct: 133 LHDGSEYTGNYADKMSKEQLKAWHTARIEICLAAGVDGLALETLPCLMEAEAVTELVLDN 192
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 244
FP K W+S C D+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGESFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ + + + +VY N+G
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRG 274
>gi|195484290|ref|XP_002090631.1| GE12691 [Drosophila yakuba]
gi|194176732|gb|EDW90343.1| GE12691 [Drosophila yakuba]
Length = 331
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 172/320 (53%), Gaps = 19/320 (5%)
Query: 270 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRD 329
G F+SQ++R+ + VDG PLW S + T PEA V+TH DF+R + + Y + +
Sbjct: 19 GGFSSQLARNVNEKVDGDPLWGSRFDATNPEAVVQTHLDFLRNGADIILT-NTYQSSVEG 77
Query: 330 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---TAASIGPYGTV 386
+Y G V +LI + +V+ +A YL I + S SIGPYG
Sbjct: 78 FVKYLG--VTRERGVELI---QKSVQLARQAKEQYLTEIGSDLESALPLILGSIGPYGAC 132
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 445
L DGSEYSG+Y +++ L +WHR +E L+ AGVD LALET+P + E A+ +L L
Sbjct: 133 LHDGSEYSGNYAHKISKEQLKSWHRTRIEILLAAGVDGLALETLPCQLEVEAVAELVLDN 192
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 500
F K W+S CKD+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FSDAKFWVSLQCKDEKHLASGEPFAEAALSVWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 501 VRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
+ + + + +VY N+G ++D+ +W T +E ++ +VP+W++ G I+GGCC
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRGEIYDAEQGEWTGTGEE--VVKFVPEWIQLGARIVGGCC 310
Query: 559 EVTSYEIQQMRIMIDEFNTK 578
V ++ +R +D N K
Sbjct: 311 RVYPTDVLAIRKYVDGLNIK 330
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 151/262 (57%), Gaps = 15/262 (5%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL 71
G F+SQ++R+ + VDG PLW S + T PEA V+TH DF+R GADII ++ YQ++V+
Sbjct: 19 GGFSSQLARNVNEKVDGDPLWGSRFDATNPEAVVQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 72 TK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
K LG + + ++L+ KSVQL AK++ +L L+ G SIGPYG
Sbjct: 79 VKYLGVTRERGVELIQKSVQLARQAKEQYLTEIGSDLESALPLILG------SIGPYGAC 132
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 189
L DGSEYSG+Y +++ L +WHR +E L+ AGVD LALET+P + E A+ +L L
Sbjct: 133 LHDGSEYSGNYAHKISKEQLKSWHRTRIEILLAAGVDGLALETLPCQLEVEAVAELVLDN 192
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 244
F K W+S CKD+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FSDAKFWVSLQCKDEKHLASGEPFAEAALSVWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ + + + +VY N+G
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRG 274
>gi|52078720|ref|YP_077511.1| homocysteine methyltransferase [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|404487595|ref|YP_006711701.1| homocysteine methyltransferase [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|52001931|gb|AAU21873.1| Homocysteine S-methyltransferase YbgG [Bacillus licheniformis DSM
13 = ATCC 14580]
gi|52346592|gb|AAU39226.1| homocysteine S-methyltransferase YbgG [Bacillus licheniformis DSM
13 = ATCC 14580]
Length = 315
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/258 (42%), Positives = 148/258 (57%), Gaps = 13/258 (5%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG+ +++ R+ D LWS+ L PE + H D+ RAGAD ++ YQ+
Sbjct: 14 VIILDGAMATELERYGCDLNDS--LWSAKILIENPELIKQVHLDYFRAGADCAITASYQS 71
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
V+ TK G SEQEAL L+ +SV+L A+D+ P+ + + AAS+GP
Sbjct: 72 TVEGFTKRGLSEQEALHLIRESVRLAAEARDEFWAAPENREGRPKPFV------AASVGP 125
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G+Y +TE +L +HR + AL+ AG D LA ETIP EA A+V L
Sbjct: 126 YGAFLADGSEYQGNY--GVTEDELADFHRRRMGALIEAGADILACETIPCLSEAKAIVHL 183
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L+EFP AW+SFS KD H S G + + L DQ+ A+GVNC R HVS+L+
Sbjct: 184 LKEFPDTHAWISFSAKDGRHISDG--TKAGECAKWLDQHDQVAAVGVNCTRLEHVSSLIG 241
Query: 247 CIKQSHPTVQTIVYPNKG 264
IK+ H IVYPN G
Sbjct: 242 GIKK-HTAKPIIVYPNSG 258
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 153/311 (49%), Gaps = 25/311 (8%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V +LDG+ +++ R+ D LWS+ L PE + H D+ R + A +
Sbjct: 14 VIILDGAMATELERYGCDLNDS--LWSAKILIENPELIKQVHLDYFRAGADCAITASYQS 71
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALI-------KPSISSQTA 377
TV G ++E + + R +V A ++ A KP + A
Sbjct: 72 TV-------EGFTKRGLSEQEALHLIRESVRLAAEARDEFWAAPENREGRPKPFV----A 120
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
AS+GPYG L DGSEY G+Y +TE +L +HR + AL+ AG D LA ETIP EA
Sbjct: 121 ASVGPYGAFLADGSEYQGNY--GVTEDELADFHRRRMGALIEAGADILACETIPCLSEAK 178
Query: 438 ALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
A+V LL+EFP AW+SFS KD H S G + + L DQ+ A+GVNC R HV
Sbjct: 179 AIVHLLKEFPDTHAWISFSAKDGRHISDG--TKAGECAKWLDQHDQVAAVGVNCTRLEHV 236
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
S+L+ IK+ H IVYPN G +D W + S W +G +IGGC
Sbjct: 237 SSLIGGIKK-HTAKPIIVYPNSGEQYDPETKTWHGAACKASFGESARSWYNQGAQLIGGC 295
Query: 558 CEVTSYEIQQM 568
C T +I+ +
Sbjct: 296 CRTTPEDIKAV 306
>gi|195344946|ref|XP_002039037.1| GM17050 [Drosophila sechellia]
gi|194134167|gb|EDW55683.1| GM17050 [Drosophila sechellia]
Length = 331
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 178/318 (55%), Gaps = 20/318 (6%)
Query: 4 ICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+ +V + DG F +Q++ H VDG PLWS+ + T P A + TH DF++ GADII ++
Sbjct: 3 LTRVLVKDGGFGTQMTVHVGDSVDGDPLWSARFNATNPAAIISTHLDFLQNGADIILTNT 62
Query: 64 YQANVDN-LTKLGYSEQEALDLLHKSVQLMNSAKDK---ENQTPDINLNKTFNLLTGHIE 119
YQ++VD + + E+++++L+ +V+L + AK++ E +++ + + L+
Sbjct: 63 YQSSVDGYMEYMELDEEQSIELIKNTVRLAHIAKERYLSECYQEQLSVQEGYPLII---- 118
Query: 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 179
ASIGP+G L DGSEY+G Y D + ++ WHR +EA + AGVD LA+ETIP + E
Sbjct: 119 --ASIGPFGAHLHDGSEYTGSYADFVPAKEITDWHRGRIEACLEAGVDALAIETIPCQME 176
Query: 180 ALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLAN---PDQIQAIGV 233
A ALV++L ++P K W++F CKD+ +HGE S A + LLA D+ AIGV
Sbjct: 177 AEALVEMLCDDYPDVKFWVAFQCKDEKTLAHGETFSDAANAIWDLLAERNAQDKCLAIGV 236
Query: 234 NCVRPSHVSTLVRCI---KQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLW 290
NCV P V+ L + + ++ + +VYPN G ++ D Q H + + P W
Sbjct: 237 NCVHPKFVTPLFKSLNGDREVGEQIPLVVYPNSG-EVYDVVNGWQGREHCVPLANYVPEW 295
Query: 291 SSVYLTTEPEACVETHRD 308
+ + C RD
Sbjct: 296 AQLGAKVIGGCCRTYARD 313
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/336 (34%), Positives = 174/336 (51%), Gaps = 34/336 (10%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIET------AA 318
V + DG F +Q++ H VDG PLWS+ + T P A + TH DF++ + +
Sbjct: 6 VLVKDGGFGTQMTVHVGDSVDGDPLWSARFNATNPAAIISTHLDFLQNGADIILTNTYQS 65
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA-LIKPSISSQTA 377
S+ Y + E S + + IA R YL+ + +S Q
Sbjct: 66 SVDGYMEYMELDEEQSIELIKNTVRLAHIAKER------------YLSECYQEQLSVQEG 113
Query: 378 -----ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA 432
ASIGP+G L DGSEY+G Y D + ++ WHR +EA + AGVD LA+ETIP
Sbjct: 114 YPLIIASIGPFGAHLHDGSEYTGSYADFVPAKEITDWHRGRIEACLEAGVDALAIETIPC 173
Query: 433 EKEALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLAN---PDQIQA 486
+ EA ALV++L ++P K W++F CKD+ +HGE S A + LLA D+ A
Sbjct: 174 QMEAEALVEMLCDDYPDVKFWVAFQCKDEKTLAHGETFSDAANAIWDLLAERNAQDKCLA 233
Query: 487 IGVNCVRPSHVSTLVRCI---KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYV 543
IGVNCV P V+ L + + ++ + +VYPN G V+D V+ W E + +YV
Sbjct: 234 IGVNCVHPKFVTPLFKSLNGDREVGEQIPLVVYPNSGEVYDVVN-GWQGREHCVPLANYV 292
Query: 544 PQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEFNTKK 579
P+W + G +IGGCC + +++ + I ++N K
Sbjct: 293 PEWAQLGAKVIGGCCRTYARDVRHIGEAIRDWNKLK 328
>gi|194759566|ref|XP_001962018.1| GF14647 [Drosophila ananassae]
gi|190615715|gb|EDV31239.1| GF14647 [Drosophila ananassae]
Length = 331
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/319 (35%), Positives = 179/319 (56%), Gaps = 20/319 (6%)
Query: 4 ICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+ +V + DG F +Q++ H VDG PLWSS + T P A + TH DF++ GADII ++
Sbjct: 3 LTRVLVKDGGFGTQMTVHVGNSVDGDPLWSSRFNATNPSAIISTHLDFLQNGADIILTNT 62
Query: 64 YQANVDN-LTKLGYSEQEALDLLHKSVQLMNSAKDK---ENQTPDINLNKTFNLLTGHIE 119
YQ++V+ + L E+++++L+ +V+L + AK++ E +++ + + L+
Sbjct: 63 YQSSVEGYMEYLELDEEQSIELIRNTVRLAHIAKERYLSECYQAQLSVPEGYPLII---- 118
Query: 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 179
ASIGP+G L DGSEY+G Y D + ++ WHR +EA + AGVD LA+ETIP + E
Sbjct: 119 --ASIGPFGAHLHDGSEYTGSYADYVPAKEITDWHRVRIEACLEAGVDALAIETIPCQME 176
Query: 180 ALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLAN---PDQIQAIGV 233
A ALV++L ++P K W++F CKD++ +HGE + A T+ LLA D+ A+GV
Sbjct: 177 AEALVEMLCDDYPDVKFWVAFQCKDESTLAHGETFADAATAIWDLLAERNAQDKCLAVGV 236
Query: 234 NCVRPSHVSTLVRCI---KQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLW 290
NCV P V+ L + + + + + +VYPN G + D Q H + + P W
Sbjct: 237 NCVHPKFVTPLFKSLNGERGADEQIPLVVYPNSG-ETYDVDNGWQGREHCVPLANYVPEW 295
Query: 291 SSVYLTTEPEACVETHRDF 309
+ + C RD
Sbjct: 296 AQLGAKVIGGCCRTYARDI 314
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 117/330 (35%), Positives = 172/330 (52%), Gaps = 22/330 (6%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V + DG F +Q++ H VDG PLWSS + T P A + TH DF++ + + Y
Sbjct: 6 VLVKDGGFGTQMTVHVGNSVDGDPLWSSRFNATNPSAIISTHLDFLQNGADIILT-NTYQ 64
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA------LIKPSISSQTAA 378
+ + EY + E I R V A YL+ L P A
Sbjct: 65 SSVEGYMEYL-----ELDEEQSIELIRNTVRLAHIAKERYLSECYQAQLSVPEGYPLIIA 119
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
SIGP+G L DGSEY+G Y D + ++ WHR +EA + AGVD LA+ETIP + EA A
Sbjct: 120 SIGPFGAHLHDGSEYTGSYADYVPAKEITDWHRVRIEACLEAGVDALAIETIPCQMEAEA 179
Query: 439 LVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLAN---PDQIQAIGVNCV 492
LV++L ++P K W++F CKD++ +HGE + A T+ LLA D+ A+GVNCV
Sbjct: 180 LVEMLCDDYPDVKFWVAFQCKDESTLAHGETFADAATAIWDLLAERNAQDKCLAVGVNCV 239
Query: 493 RPSHVSTLVRCI---KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEE 549
P V+ L + + + + + +VYPN G +D V W E + +YVP+W +
Sbjct: 240 HPKFVTPLFKSLNGERGADEQIPLVVYPNSGETYD-VDNGWQGREHCVPLANYVPEWAQL 298
Query: 550 GVNIIGGCCEVTSYEIQQMRIMIDEFNTKK 579
G +IGGCC + +I+ + I ++N K
Sbjct: 299 GAKVIGGCCRTYARDIRHIGEAIRDWNKLK 328
>gi|20129603|ref|NP_609920.1| CG10621 [Drosophila melanogaster]
gi|7298506|gb|AAF53725.1| CG10621 [Drosophila melanogaster]
gi|157816384|gb|ABV82186.1| FI01821p [Drosophila melanogaster]
Length = 331
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/319 (35%), Positives = 178/319 (55%), Gaps = 20/319 (6%)
Query: 4 ICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+ +V + DG F +Q++ H VDG PLWS+ + T P A + TH DF++ GADII ++
Sbjct: 3 LTRVLVKDGGFGTQMTVHVGDSVDGDPLWSARFNATNPAAIISTHLDFLQNGADIILTNT 62
Query: 64 YQANVDN-LTKLGYSEQEALDLLHKSVQLMNSAKDK---ENQTPDINLNKTFNLLTGHIE 119
YQ++VD + L E+++++L+ +V+L + AK++ E +++ + + L+
Sbjct: 63 YQSSVDGYMEYLELDEEQSIELIKNTVRLAHIAKERYLTECYQAQLSVQEGYPLII---- 118
Query: 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 179
ASIGP+G L DGSEY+G Y D + ++ WHR +EA + AGVD LA+ETIP + E
Sbjct: 119 --ASIGPFGAHLHDGSEYTGSYADFVPAKEITDWHRVRIEACLEAGVDALAIETIPCQME 176
Query: 180 ALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLAN---PDQIQAIGV 233
A ALV++L ++P K W++F CKD+ +HGE + A + LLA D+ AIGV
Sbjct: 177 AEALVEMLCDDYPDVKFWVAFQCKDENTLAHGETFADAANAIWDLLAERNAQDKCLAIGV 236
Query: 234 NCVRPSHVSTLVRCI---KQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLW 290
NCV P V+ L + + ++ + +VYPN G ++ D Q H + + P W
Sbjct: 237 NCVHPKFVTPLFKSLNGDREVGEQIPLVVYPNSG-EVYDVVNGWQGREHCVPLANYVPEW 295
Query: 291 SSVYLTTEPEACVETHRDF 309
+ + C RD
Sbjct: 296 AQLGAKVIGGCCRTYARDI 314
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/335 (34%), Positives = 172/335 (51%), Gaps = 32/335 (9%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIET------AA 318
V + DG F +Q++ H VDG PLWS+ + T P A + TH DF++ + +
Sbjct: 6 VLVKDGGFGTQMTVHVGDSVDGDPLWSARFNATNPAAIISTHLDFLQNGADIILTNTYQS 65
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA- 377
S+ Y L E S + + IA R E + +S Q
Sbjct: 66 SVDGYMEYLELDEEQSIELIKNTVRLAHIAKERYLTECY-----------QAQLSVQEGY 114
Query: 378 ----ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
ASIGP+G L DGSEY+G Y D + ++ WHR +EA + AGVD LA+ETIP +
Sbjct: 115 PLIIASIGPFGAHLHDGSEYTGSYADFVPAKEITDWHRVRIEACLEAGVDALAIETIPCQ 174
Query: 434 KEALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLAN---PDQIQAI 487
EA ALV++L ++P K W++F CKD+ +HGE + A + LLA D+ AI
Sbjct: 175 MEAEALVEMLCDDYPDVKFWVAFQCKDENTLAHGETFADAANAIWDLLAERNAQDKCLAI 234
Query: 488 GVNCVRPSHVSTLVRCI---KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVP 544
GVNCV P V+ L + + ++ + +VYPN G V+D V+ W E + +YVP
Sbjct: 235 GVNCVHPKFVTPLFKSLNGDREVGEQIPLVVYPNSGEVYDVVN-GWQGREHCVPLANYVP 293
Query: 545 QWLEEGVNIIGGCCEVTSYEIQQMRIMIDEFNTKK 579
+W + G +IGGCC + +I+ + I ++N K
Sbjct: 294 EWAQLGAKVIGGCCRTYARDIRHIGEAIRDWNKLK 328
>gi|319648990|ref|ZP_08003199.1| YbgG protein [Bacillus sp. BT1B_CT2]
gi|423680619|ref|ZP_17655458.1| homocysteine methyltransferase [Bacillus licheniformis WX-02]
gi|317388984|gb|EFV69802.1| YbgG protein [Bacillus sp. BT1B_CT2]
gi|383441725|gb|EID49434.1| homocysteine methyltransferase [Bacillus licheniformis WX-02]
Length = 315
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/258 (42%), Positives = 148/258 (57%), Gaps = 13/258 (5%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG+ +++ R+ D LWS+ L PE + H D+ RAGAD ++ YQ+
Sbjct: 14 VIILDGAMATELERYGCDLNDS--LWSAKILIENPELIKQVHLDYFRAGADCAITASYQS 71
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
V+ TK G SEQEAL L+ +SV+L A+D+ P+ + + AAS+GP
Sbjct: 72 TVEGFTKRGLSEQEALHLIRESVRLAAEARDEFWAAPENREGRPKPFV------AASVGP 125
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G+Y +TE +L +HR + AL+ AG D LA ETIP EA A+V L
Sbjct: 126 YGAFLADGSEYRGNY--GVTEDELADFHRRRMGALIEAGADILACETIPCLSEAKAIVHL 183
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L+EFP AW+SFS KD H S G + + L DQ+ A+GVNC R HVS+L+
Sbjct: 184 LKEFPDTHAWISFSAKDGRHISDG--TKAGECAKWLDQHDQVAAVGVNCTRLEHVSSLIG 241
Query: 247 CIKQSHPTVQTIVYPNKG 264
IK+ H IVYPN G
Sbjct: 242 GIKK-HTAKPIIVYPNSG 258
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 153/311 (49%), Gaps = 25/311 (8%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V +LDG+ +++ R+ D LWS+ L PE + H D+ R + A +
Sbjct: 14 VIILDGAMATELERYGCDLNDS--LWSAKILIENPELIKQVHLDYFRAGADCAITASYQS 71
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALI-------KPSISSQTA 377
TV G ++E + + R +V A ++ A KP + A
Sbjct: 72 TV-------EGFTKRGLSEQEALHLIRESVRLAAEARDEFWAAPENREGRPKPFV----A 120
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
AS+GPYG L DGSEY G+Y +TE +L +HR + AL+ AG D LA ETIP EA
Sbjct: 121 ASVGPYGAFLADGSEYRGNY--GVTEDELADFHRRRMGALIEAGADILACETIPCLSEAK 178
Query: 438 ALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
A+V LL+EFP AW+SFS KD H S G + + L DQ+ A+GVNC R HV
Sbjct: 179 AIVHLLKEFPDTHAWISFSAKDGRHISDG--TKAGECAKWLDQHDQVAAVGVNCTRLEHV 236
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
S+L+ IK+ H IVYPN G +D W + S W +G +IGGC
Sbjct: 237 SSLIGGIKK-HTAKPIIVYPNSGEQYDPETKTWHGAACKTSFGESARSWYNQGAQLIGGC 295
Query: 558 CEVTSYEIQQM 568
C T +I+ +
Sbjct: 296 CRTTPEDIKAV 306
>gi|195114994|ref|XP_002002052.1| GI17171 [Drosophila mojavensis]
gi|193912627|gb|EDW11494.1| GI17171 [Drosophila mojavensis]
Length = 331
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 179/321 (55%), Gaps = 20/321 (6%)
Query: 4 ICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+ +V + DG F +Q++ H VDG PLWS+ + T P A + TH DF++ GAD++ ++
Sbjct: 3 LTRVLVKDGGFGTQMTVHVGNSVDGDPLWSARFNATNPTAVINTHLDFLQNGADLVLTNT 62
Query: 64 YQANVDN-LTKLGYSEQEALDLLHKSVQLMNSAKDK---ENQTPDINLNKTFNLLTGHIE 119
YQ +V+ + L EQE+++L+ +V+L + AK+K E + +++ + L+
Sbjct: 63 YQTSVEGYMEYLELDEQESVELIKNTVRLAHIAKEKYLTECYEAQLEIHEGYPLII---- 118
Query: 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 179
ASIGP+G L DGSEY+G Y D + + WHR +EA + AGVD LA+ETIP + E
Sbjct: 119 --ASIGPFGAHLHDGSEYTGSYADYVPAKTITDWHRVRIEACLEAGVDALAIETIPCQME 176
Query: 180 ALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLANP---DQIQAIGV 233
A ALV++L ++P K W++F CKD++ +HGE + AV + LLA D+ A+GV
Sbjct: 177 AEALVEMLCDDYPDVKFWVAFQCKDESTLAHGEDFADAVNAIWDLLAERKALDKCLAVGV 236
Query: 234 NCVRPSHVSTLVRCI---KQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLW 290
NCV P V+ L + + + + +VYPN G ++ D + Q H + + P W
Sbjct: 237 NCVHPKFVTPLFKSLNGERSPDEQIPLVVYPNSG-EVYDVTTGWQGREHCVPLENYVPEW 295
Query: 291 SSVYLTTEPEACVETHRDFIR 311
+ + C RD R
Sbjct: 296 TQLGAKIIGGCCRTYARDIRR 316
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 171/331 (51%), Gaps = 22/331 (6%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V + DG F +Q++ H VDG PLWS+ + T P A + TH DF++ + + Y
Sbjct: 6 VLVKDGGFGTQMTVHVGNSVDGDPLWSARFNATNPTAVINTHLDFLQNGADLVLT-NTYQ 64
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA------LIKPSISSQTAA 378
T + EY +D +LI + V A YL L A
Sbjct: 65 TSVEGYMEYLE--LDEQESVELI---KNTVRLAHIAKEKYLTECYEAQLEIHEGYPLIIA 119
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
SIGP+G L DGSEY+G Y D + + WHR +EA + AGVD LA+ETIP + EA A
Sbjct: 120 SIGPFGAHLHDGSEYTGSYADYVPAKTITDWHRVRIEACLEAGVDALAIETIPCQMEAEA 179
Query: 439 LVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLANP---DQIQAIGVNCV 492
LV++L ++P K W++F CKD++ +HGE + AV + LLA D+ A+GVNCV
Sbjct: 180 LVEMLCDDYPDVKFWVAFQCKDESTLAHGEDFADAVNAIWDLLAERKALDKCLAVGVNCV 239
Query: 493 RPSHVSTLVRCI---KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEE 549
P V+ L + + + + +VYPN G V+D V W E + +YVP+W +
Sbjct: 240 HPKFVTPLFKSLNGERSPDEQIPLVVYPNSGEVYD-VTTGWQGREHCVPLENYVPEWTQL 298
Query: 550 GVNIIGGCCEVTSYEIQQMRIMIDEFNTKKN 580
G IIGGCC + +I+++ + + N K
Sbjct: 299 GAKIIGGCCRTYARDIRRISEAVHDINKLKK 329
>gi|195580010|ref|XP_002079849.1| GD21797 [Drosophila simulans]
gi|194191858|gb|EDX05434.1| GD21797 [Drosophila simulans]
Length = 331
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 178/318 (55%), Gaps = 20/318 (6%)
Query: 4 ICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+ +V + DG F +Q++ H VDG PLWS+ + T P A + TH DF++ GADII ++
Sbjct: 3 LTRVLVKDGGFGTQMTVHVGDSVDGDPLWSARFNATNPAAIISTHLDFLQNGADIILTNT 62
Query: 64 YQANVDN-LTKLGYSEQEALDLLHKSVQLMNSAKDK---ENQTPDINLNKTFNLLTGHIE 119
YQ++VD + L E+++++L+ +V+L + AK++ E +++ + + L+
Sbjct: 63 YQSSVDGYMEYLELDEEQSIELIKNTVRLAHIAKERYLTECYQAQLSVQEGYPLII---- 118
Query: 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 179
ASIGP+G L DGSEY+G Y D + ++ WHR +EA + AGVD LA+ETIP + E
Sbjct: 119 --ASIGPFGAHLHDGSEYTGSYADFVPAKEITDWHRVRIEACLEAGVDALAIETIPCQME 176
Query: 180 ALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLAN---PDQIQAIGV 233
A ALV++L ++P K W++F CKD+ +HGE + A + LLA+ D+ AIGV
Sbjct: 177 AEALVEMLCDDYPDVKFWVAFQCKDENTLAHGETFADAANAIWDLLADRNAQDKCLAIGV 236
Query: 234 NCVRPSHVSTLVRCI---KQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLW 290
NCV P V+ L + + ++ + +VYPN G ++ D Q H + P W
Sbjct: 237 NCVHPKFVTPLFKSLNGDREVGEQIPLVVYPNSG-EVYDVVNGWQGREHCVPLASYVPEW 295
Query: 291 SSVYLTTEPEACVETHRD 308
+ + C RD
Sbjct: 296 AQLGAKVIGGCCRTYARD 313
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 172/335 (51%), Gaps = 32/335 (9%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIET------AA 318
V + DG F +Q++ H VDG PLWS+ + T P A + TH DF++ + +
Sbjct: 6 VLVKDGGFGTQMTVHVGDSVDGDPLWSARFNATNPAAIISTHLDFLQNGADIILTNTYQS 65
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA- 377
S+ Y L E S + + IA R E + +S Q
Sbjct: 66 SVDGYMEYLELDEEQSIELIKNTVRLAHIAKERYLTECY-----------QAQLSVQEGY 114
Query: 378 ----ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
ASIGP+G L DGSEY+G Y D + ++ WHR +EA + AGVD LA+ETIP +
Sbjct: 115 PLIIASIGPFGAHLHDGSEYTGSYADFVPAKEITDWHRVRIEACLEAGVDALAIETIPCQ 174
Query: 434 KEALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLAN---PDQIQAI 487
EA ALV++L ++P K W++F CKD+ +HGE + A + LLA+ D+ AI
Sbjct: 175 MEAEALVEMLCDDYPDVKFWVAFQCKDENTLAHGETFADAANAIWDLLADRNAQDKCLAI 234
Query: 488 GVNCVRPSHVSTLVRCI---KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVP 544
GVNCV P V+ L + + ++ + +VYPN G V+D V+ W E + YVP
Sbjct: 235 GVNCVHPKFVTPLFKSLNGDREVGEQIPLVVYPNSGEVYDVVN-GWQGREHCVPLASYVP 293
Query: 545 QWLEEGVNIIGGCCEVTSYEIQQMRIMIDEFNTKK 579
+W + G +IGGCC + +++ + I ++N K
Sbjct: 294 EWAQLGAKVIGGCCRTYARDVRHIGEAIRDWNKLK 328
>gi|312381266|gb|EFR27053.1| hypothetical protein AND_06463 [Anopheles darlingi]
Length = 279
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/271 (39%), Positives = 156/271 (57%), Gaps = 16/271 (5%)
Query: 4 ICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+ V +LDG F +Q+S H K +DG PLWS+ + T P A TH DF+ AGA+ I ++
Sbjct: 1 MSAVTVLDGGFATQLSVHVGKSIDGDPLWSARFNATNPNAVFRTHLDFLEAGAEAIMTNT 60
Query: 64 YQANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTP-DINLNKTFNLLTGHIETA 121
YQA+++ + L +E +L+L+ +V++ A+ + + N +T LL
Sbjct: 61 YQASIEGYGEHLHLNEDASLNLIKSTVRVAQMARTRFLASRVSTNQPRTTPLLV------ 114
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
ASIGPYG L DGSEY+G Y +++ + WHRP ++A V AGVD L +ETIP + EA
Sbjct: 115 ASIGPYGAHLHDGSEYTGSYATTVSPDTIQKWHRPRIDACVEAGVDVLGIETIPCKMEAA 174
Query: 182 ALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTS----CLLANPDQIQAIGVNCV 236
AL ++ E+P + W+SF CKD+ H ++GEL S V S + A+GVNCV
Sbjct: 175 ALFDMMCEEYPSVRFWISFQCKDNLHLANGELFSETVNSLWARARARRNKTLLALGVNCV 234
Query: 237 RPSHVSTLVRCI-KQSHPTVQT--IVYPNKG 264
P V+ L + + +Q P V+ IVYPN G
Sbjct: 235 HPQIVTPLFKSVNEQKAPEVRIPLIVYPNSG 265
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 142/274 (51%), Gaps = 22/274 (8%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIET------A 317
V +LDG F +Q+S H K +DG PLWS+ + T P A TH DF+ E
Sbjct: 3 AVTVLDGGFATQLSVHVGKSIDGDPLWSARFNATNPNAVFRTHLDFLEAGAEAIMTNTYQ 62
Query: 318 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA 377
ASI YG L + S + + S +A R ++ +P +
Sbjct: 63 ASIEGYGEHLHLNEDASLNLIKSTVRVAQMA--------RTRFLASRVSTNQPRTTPLLV 114
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
ASIGPYG L DGSEY+G Y +++ + WHRP ++A V AGVD L +ETIP + EA
Sbjct: 115 ASIGPYGAHLHDGSEYTGSYATTVSPDTIQKWHRPRIDACVEAGVDVLGIETIPCKMEAA 174
Query: 438 ALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTS----CLLANPDQIQAIGVNCV 492
AL ++ E+P + W+SF CKD+ H ++GEL S V S + A+GVNCV
Sbjct: 175 ALFDMMCEEYPSVRFWISFQCKDNLHLANGELFSETVNSLWARARARRNKTLLALGVNCV 234
Query: 493 RPSHVSTLVRCI-KQSHPTVQT--IVYPNKGGVW 523
P V+ L + + +Q P V+ IVYPN G ++
Sbjct: 235 HPQIVTPLFKSVNEQKAPEVRIPLIVYPNSGEIY 268
>gi|195148673|ref|XP_002015292.1| GL19625 [Drosophila persimilis]
gi|198475016|ref|XP_001356892.2| GA10445 [Drosophila pseudoobscura pseudoobscura]
gi|194107245|gb|EDW29288.1| GL19625 [Drosophila persimilis]
gi|198138642|gb|EAL33958.2| GA10445 [Drosophila pseudoobscura pseudoobscura]
Length = 349
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/326 (34%), Positives = 173/326 (53%), Gaps = 32/326 (9%)
Query: 270 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRD 329
G F+SQ++ + + VDG PLW S + T P+A ++TH DF+R + + Y + +
Sbjct: 24 GGFSSQLAHNVDEKVDGDPLWGSRFDATNPQAVIKTHLDFLRSGADIILT-NTYQSSVEG 82
Query: 330 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA-------LIKPSISSQTAASIGP 382
+Y ++T +A +V +A YL +IKP ASIGP
Sbjct: 83 FMKYL-----ALTREQSVALIEKSVHLTQQAKAQYLKEILQSGEIIKPFFP-LILASIGP 136
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK- 441
YG L DGSEYSG Y D +++ L WHR +E + AGVD LA ET+P + EALA+ +
Sbjct: 137 YGAHLHDGSEYSGSYADKISKEKLQDWHRTRIETCLLAGVDGLAAETLPCQLEALAITES 196
Query: 442 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQA---------IGVNCV 492
+L + K W+SF CKDDT + GE + A LA +QA IGVNCV
Sbjct: 197 ILENYTNVKFWVSFQCKDDTSLADGESFAEAA----LAVWRMVQAYKAQTRLLGIGVNCV 252
Query: 493 RPSHVSTLVRCIKQSH--PTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEG 550
P+ V+ L+R + + + +VY N+G ++DSV +W T ++ + +VP+W+ G
Sbjct: 253 NPTFVTPLLRSLNAAAGLDRIPLVVYSNRGEIYDSVRGEWTGTGED--VAKFVPEWVRLG 310
Query: 551 VNIIGGCCEVTSYEIQQMRIMIDEFN 576
++GGCC V ++ ++R +D N
Sbjct: 311 ARVVGGCCRVYPDDVLKIRKCVDSLN 336
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/269 (39%), Positives = 153/269 (56%), Gaps = 26/269 (9%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL 71
G F+SQ++ + + VDG PLW S + T P+A ++TH DF+R+GADII ++ YQ++V+
Sbjct: 24 GGFSSQLAHNVDEKVDGDPLWGSRFDATNPQAVIKTHLDFLRSGADIILTNTYQSSVEGF 83
Query: 72 TK-LGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAASIGPY 127
K L + ++++ L+ KSV L AK KE + F L+ ASIGPY
Sbjct: 84 MKYLALTREQSVALIEKSVHLTQQAKAQYLKEILQSGEIIKPFFPLIL------ASIGPY 137
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK-L 186
G L DGSEYSG Y D +++ L WHR +E + AGVD LA ET+P + EALA+ + +
Sbjct: 138 GAHLHDGSEYSGSYADKISKEKLQDWHRTRIETCLLAGVDGLAAETLPCQLEALAITESI 197
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQA---------IGVNCVR 237
L + K W+SF CKDDT + GE + A LA +QA IGVNCV
Sbjct: 198 LENYTNVKFWVSFQCKDDTSLADGESFAEAA----LAVWRMVQAYKAQTRLLGIGVNCVN 253
Query: 238 PSHVSTLVRCIKQSH--PTVQTIVYPNKG 264
P+ V+ L+R + + + +VY N+G
Sbjct: 254 PTFVTPLLRSLNAAAGLDRIPLVVYSNRG 282
>gi|390454605|ref|ZP_10240133.1| homocysteine methyltransferase [Paenibacillus peoriae KCTC 3763]
Length = 315
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/261 (41%), Positives = 152/261 (58%), Gaps = 16/261 (6%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG+ +++ RH D LWS+ L PEA HRD+ AGAD ++ YQA
Sbjct: 13 VIVLDGAMATELERHGHDLNDS--LWSAKILHEHPEAIKRVHRDYFEAGADCAITASYQA 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK---ENQTPDINLNKTFNLLTGHIETAAS 123
V+ + G SE EAL+L+ SV++ A+D+ E T ++ L+ AAS
Sbjct: 71 TVEGYVQRGMSENEALELIQSSVRIAVQARDEFWAEAATAANQQHRPKPLV------AAS 124
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G Y ++E L+ +HRP ++AL+ AG D LA ETIP EA A+
Sbjct: 125 VGPYGAFLADGSEYRGDY--KLSEEQLVEFHRPRMKALIEAGADILACETIPCLVEAKAI 182
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
+LL+EFPG AW+SFS KD H S+GE S A + L +Q+ A+G+NC P + +
Sbjct: 183 ARLLKEFPGTYAWISFSAKDGQHISNGE--SVAACAEWLNEYEQVAAVGINCTLPKFIPS 240
Query: 244 LVRCIKQSHPTVQTIVYPNKG 264
L++ I+ SH +VYPN G
Sbjct: 241 LIQGIR-SHTDKPVVVYPNLG 260
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/315 (35%), Positives = 163/315 (51%), Gaps = 23/315 (7%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
YP V +LDG+ +++ RH D LWS+ L PEA HRD+ + A +
Sbjct: 11 YP---VIVLDGAMATELERHGHDLNDS--LWSAKILHEHPEAIKRVHRDYFEAGADCAIT 65
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---- 375
TV G+ M+E + + + +V V+A ++ A + + Q
Sbjct: 66 ASYQATV-------EGYVQRGMSENEALELIQSSVRIAVQARDEFWAEAATAANQQHRPK 118
Query: 376 --TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
AAS+GPYG L DGSEY G Y ++E L+ +HRP ++AL+ AG D LA ETIP
Sbjct: 119 PLVAASVGPYGAFLADGSEYRGDY--KLSEEQLVEFHRPRMKALIEAGADILACETIPCL 176
Query: 434 KEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
EA A+ +LL+EFPG AW+SFS KD H S+GE S A + L +Q+ A+G+NC
Sbjct: 177 VEAKAIARLLKEFPGTYAWISFSAKDGQHISNGE--SVAACAEWLNEYEQVAAVGINCTL 234
Query: 494 PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNI 553
P + +L++ I+ SH +VYPN G +D V W T + W E G +
Sbjct: 235 PKFIPSLIQGIR-SHTDKPVVVYPNLGEEYDPVTKTWHGTTCTETFGQSARHWYEAGARL 293
Query: 554 IGGCCEVTSYEIQQM 568
IGGCC +I+++
Sbjct: 294 IGGCCRTQPQDIKEI 308
>gi|21711775|gb|AAM75078.1| RE64786p [Drosophila melanogaster]
Length = 326
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 174/302 (57%), Gaps = 20/302 (6%)
Query: 4 ICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+ +V + DG F +Q++ H VDG PLWS+ + T P A + TH DF++ GADII ++
Sbjct: 3 LTRVLVKDGGFGTQMTVHVGDSVDGDPLWSARFNATNPAAIISTHLDFLQNGADIILTNT 62
Query: 64 YQANVDN-LTKLGYSEQEALDLLHKSVQLMNSAKDK---ENQTPDINLNKTFNLLTGHIE 119
YQ++VD + L E+++++L+ +V+L + AK++ E +++ + + L+
Sbjct: 63 YQSSVDGYMEYLELDEEQSIELIKNTVRLAHIAKERYLTECYQAQLSVQEGYPLII---- 118
Query: 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 179
ASIGP+G L DGSEY+G Y D + ++ WHR +EA + AGVD LA+ETIP + E
Sbjct: 119 --ASIGPFGAHLHDGSEYTGSYADFVPAKEITDWHRVRIEACLEAGVDALAIETIPCQME 176
Query: 180 ALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLAN---PDQIQAIGV 233
A ALV++L ++P K W++F CKD+ +HGE + A + LLA D+ AIGV
Sbjct: 177 AEALVEMLCDDYPDVKFWVAFQCKDENTLAHGETFADAANAIWDLLAERNAQDKCLAIGV 236
Query: 234 NCVRPSHVSTLVRCI---KQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLW 290
NCV P V+ L + + ++ + +VYPN G ++ D Q H + + P W
Sbjct: 237 NCVHPKFVTPLFKSLNGDREVGEQIPLVVYPNSG-EVYDVVNGWQGREHCVPLANYVPEW 295
Query: 291 SS 292
+
Sbjct: 296 GN 297
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 158/309 (51%), Gaps = 28/309 (9%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIET------AA 318
V + DG F +Q++ H VDG PLWS+ + T P A + TH DF++ + +
Sbjct: 6 VLVKDGGFGTQMTVHVGDSVDGDPLWSARFNATNPAAIISTHLDFLQNGADIILTNTYQS 65
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVE---ALVRAGVDYLALIKPSISSQ 375
S+ Y L E S + + IA R E A + Y +I
Sbjct: 66 SVDGYMEYLELDEEQSIELIKNTVRLAHIAKERYLTECYQAQLSVQEGYPLII------- 118
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
ASIGP+G L DGSEY+G Y D + ++ WHR +EA + AGVD LA+ETIP + E
Sbjct: 119 --ASIGPFGAHLHDGSEYTGSYADFVPAKEITDWHRVRIEACLEAGVDALAIETIPCQME 176
Query: 436 ALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLAN---PDQIQAIGV 489
A ALV++L ++P K W++F CKD+ +HGE + A + LLA D+ AIGV
Sbjct: 177 AEALVEMLCDDYPDVKFWVAFQCKDENTLAHGETFADAANAIWDLLAERNAQDKCLAIGV 236
Query: 490 NCVRPSHVSTLVRCI---KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQW 546
NCV P V+ L + + ++ + +VYPN G V+D V+ W E + +YVP+W
Sbjct: 237 NCVHPKFVTPLFKSLNGDREVGEQIPLVVYPNSGEVYDVVN-GWQGREHCVPLANYVPEW 295
Query: 547 LEEGVNIIG 555
G +G
Sbjct: 296 GNWGPRSLG 304
>gi|295702986|ref|YP_003596061.1| homocysteine S-methyltransferase [Bacillus megaterium DSM 319]
gi|294800645|gb|ADF37711.1| homocysteine S-methyltransferase [Bacillus megaterium DSM 319]
Length = 311
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/258 (40%), Positives = 152/258 (58%), Gaps = 13/258 (5%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG+ +++ R++ D LWS+ L +PE H+D+ AGAD ++ YQ+
Sbjct: 13 VIVLDGAMATELERYSCDLNDS--LWSAKVLMEQPELIKRVHQDYFAAGADCAITASYQS 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ K G SE EA +L+ SV++ ++D+ + LN+ ++ AAS+GP
Sbjct: 71 TFEGFAKRGLSEAEARELIQASVKIAAESRDEFWHQEENRLNRPKPIV------AASVGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L +GSEY+G Y +TE +L+ +HRP ++AL+ AG D LA ETIP EA A+ KL
Sbjct: 125 YGAFLANGSEYTGQY--DVTEEELMEFHRPRMKALIEAGADVLACETIPNLMEARAIAKL 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L EF G AW++FS KDD H S G LIS L + +Q+ A+GVNC P ++S+L++
Sbjct: 183 LEEFEGAYAWITFSAKDDLHISSGTLISECAR--YLDSYEQVAALGVNCTPPQYISSLIK 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
IK S IVYPN G
Sbjct: 241 EIK-SQTDKPVIVYPNSG 257
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 157/313 (50%), Gaps = 33/313 (10%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V +LDG+ +++ R++ D LWS+ L +PE H+D+ + A +
Sbjct: 13 VIVLDGAMATELERYSCDLNDS--LWSAKVLMEQPELIKRVHQDYFAAGADCAITASYQS 70
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--------- 375
T + G ++EA+ L++A V A + Q
Sbjct: 71 T-------FEGFAKRGLSEAE--------ARELIQASVKIAAESRDEFWHQEENRLNRPK 115
Query: 376 --TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
AAS+GPYG L +GSEY+G Y +TE +L+ +HRP ++AL+ AG D LA ETIP
Sbjct: 116 PIVAASVGPYGAFLANGSEYTGQY--DVTEEELMEFHRPRMKALIEAGADVLACETIPNL 173
Query: 434 KEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
EA A+ KLL EF G AW++FS KDD H S G LIS L + +Q+ A+GVNC
Sbjct: 174 MEARAIAKLLEEFEGAYAWITFSAKDDLHISSGTLISECAR--YLDSYEQVAALGVNCTP 231
Query: 494 PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNI 553
P ++S+L++ IK S IVYPN G +D+ W T + W E G +
Sbjct: 232 PQYISSLIKEIK-SQTDKPVIVYPNSGEHYDAESKTWNGTSAGETYGCSAHSWYEAGAQL 290
Query: 554 IGGCCEVTSYEIQ 566
IGGCC T +I+
Sbjct: 291 IGGCCRTTPDDIK 303
>gi|223967975|emb|CAR93718.1| CG10623-PA [Drosophila melanogaster]
Length = 331
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/262 (38%), Positives = 151/262 (57%), Gaps = 15/262 (5%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL 71
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R GADII ++ YQ++V+
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 72 TK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
K LG + + ++L+ KSVQL AK++ L+ G SIGPYG
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQAKEQYLSEIGSEAESALPLIMG------SIGPYGAY 132
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 189
L DGSEY+G+Y D M++ +L AWH+ +E + AGVD LALET+P EA A+ +L L +
Sbjct: 133 LHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDK 192
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 244
FP K W+S C D+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ + + + +VY N+G
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRG 274
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 172/320 (53%), Gaps = 19/320 (5%)
Query: 270 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRD 329
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R + + Y + +
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILT-NTYQSSVEG 77
Query: 330 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---TAASIGPYGTV 386
+Y G V +LI + +V+ +A YL+ I S SIGPYG
Sbjct: 78 FVKYLG--VTRERGVELI---QKSVQLAKQAKEQYLSEIGSEAESALPLIMGSIGPYGAY 132
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 445
L DGSEY+G+Y D M++ +L AWH+ +E + AGVD LALET+P EA A+ +L L +
Sbjct: 133 LHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDK 192
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 500
FP K W+S C D+ H + GE + A S +++ IG+NCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 501 VRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
+ + + + +VY N+G +++ W T +E ++ +VP+W++ GV I+GGCC
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRGEIYNVEQGDWTGTGEE--VVKFVPEWIQLGVRIVGGCC 310
Query: 559 EVTSYEIQQMRIMIDEFNTK 578
V ++ + +D N K
Sbjct: 311 RVYPTDVLAICKYVDGLNIK 330
>gi|194879917|ref|XP_001974328.1| GG21671 [Drosophila erecta]
gi|190657515|gb|EDV54728.1| GG21671 [Drosophila erecta]
Length = 331
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 120/331 (36%), Positives = 168/331 (50%), Gaps = 24/331 (7%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIET------AA 318
V L DG F +Q++ H VDG PLWSS + T P A + TH DF++ + +
Sbjct: 6 VLLKDGGFGTQMTVHVGNSVDGDPLWSSRFNATNPAAIISTHLDFLQNGADIILTNTYQS 65
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA-LIKPSISSQTA 377
S+ Y L E S + + IA R E Y A L P
Sbjct: 66 SLEGYMEYLELDEEQSIELIKNTVRLAHIAKERYLTEC-------YQAQLTVPEGYPLII 118
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
ASIGPYG L DGSEY+G Y D + ++ WHR +EA + AGVD LA+ETIP + EA
Sbjct: 119 ASIGPYGAHLHDGSEYTGSYADYVPAKEITDWHRVRIEACLEAGVDALAIETIPCQMEAE 178
Query: 438 ALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLAN---PDQIQAIGVNC 491
ALV++L ++P K W++F C + +HGE + A + LLA D+ AIGVNC
Sbjct: 179 ALVEMLCDDYPDVKFWVAFQCNGENTLAHGETFADATNAIWDLLAERNAQDKCLAIGVNC 238
Query: 492 VRPSHVSTLVRCIKQSHPTVQTI---VYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLE 548
V P V+ L + + + I VYPN G V+D V+ W E + +YVP+W +
Sbjct: 239 VNPKFVTPLFKSLNGDREVAEQIPLVVYPNSGEVYDVVN-GWQGKEHCVPLANYVPEWAQ 297
Query: 549 EGVNIIGGCCEVTSYEIQQMRIMIDEFNTKK 579
G +IGGCC + +I+ + I ++N K
Sbjct: 298 LGAKVIGGCCRTYARDIRHIGEAIRDWNKLK 328
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/319 (35%), Positives = 173/319 (54%), Gaps = 20/319 (6%)
Query: 4 ICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+ +V L DG F +Q++ H VDG PLWSS + T P A + TH DF++ GADII ++
Sbjct: 3 LTRVLLKDGGFGTQMTVHVGNSVDGDPLWSSRFNATNPAAIISTHLDFLQNGADIILTNT 62
Query: 64 YQANVDN-LTKLGYSEQEALDLLHKSVQLMNSAKDK---ENQTPDINLNKTFNLLTGHIE 119
YQ++++ + L E+++++L+ +V+L + AK++ E + + + + L+
Sbjct: 63 YQSSLEGYMEYLELDEEQSIELIKNTVRLAHIAKERYLTECYQAQLTVPEGYPLII---- 118
Query: 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 179
ASIGPYG L DGSEY+G Y D + ++ WHR +EA + AGVD LA+ETIP + E
Sbjct: 119 --ASIGPYGAHLHDGSEYTGSYADYVPAKEITDWHRVRIEACLEAGVDALAIETIPCQME 176
Query: 180 ALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLAN---PDQIQAIGV 233
A ALV++L ++P K W++F C + +HGE + A + LLA D+ AIGV
Sbjct: 177 AEALVEMLCDDYPDVKFWVAFQCNGENTLAHGETFADATNAIWDLLAERNAQDKCLAIGV 236
Query: 234 NCVRPSHVSTLVRCIKQSHPTVQTI---VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLW 290
NCV P V+ L + + + I VYPN G ++ D Q H + + P W
Sbjct: 237 NCVNPKFVTPLFKSLNGDREVAEQIPLVVYPNSG-EVYDVVNGWQGKEHCVPLANYVPEW 295
Query: 291 SSVYLTTEPEACVETHRDF 309
+ + C RD
Sbjct: 296 AQLGAKVIGGCCRTYARDI 314
>gi|196012640|ref|XP_002116182.1| hypothetical protein TRIADDRAFT_60203 [Trichoplax adhaerens]
gi|190581137|gb|EDV21215.1| hypothetical protein TRIADDRAFT_60203 [Trichoplax adhaerens]
Length = 321
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 153/264 (57%), Gaps = 14/264 (5%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ ++DG+ +++ R DVD PLWS+ L T P+ + H ++ AGADII ++ YQ
Sbjct: 4 EILVIDGACGTELQRLGY-DVDADPLWSASLLLTNPQVIKDLHTSYLNAGADIILTATYQ 62
Query: 66 ANVDNLTKLG-YSEQEALDLLHKSVQLMNSAKDK---ENQTPDINLNKTFNLLTGHIETA 121
A++ L + +E A ++ +V+L A+D+ E + + N+ + L+ G
Sbjct: 63 ASIPGLVQYADLTEASASAVIAMAVRLAIEARDEFWAEQKACNKNVRRPKPLVVG----- 117
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
S+GP+G DGSE+ G Y D MT +L WH+P + L++ GVD +A ETIPAEKEA+
Sbjct: 118 -SVGPFGACQHDGSEFHGRYTDEMTIEELKQWHKPRIMELIQNGVDLIAFETIPAEKEAI 176
Query: 182 ALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 241
AL+++L F G KAWLSF CKDD H +HGEL + + N +QI AIG NC P +V
Sbjct: 177 ALIQVLETFRGVKAWLSFVCKDDLHLNHGELFADVMER--FRNHNQIVAIGTNCTNPQNV 234
Query: 242 STLVR-CIKQSHPTVQTIVYPNKG 264
L++ C + I YPN G
Sbjct: 235 DNLIQSCKRLDAYDKPFIAYPNSG 258
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 168/319 (52%), Gaps = 18/319 (5%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETA- 317
+K + ++DG+ +++ R DVD PLWS+ L T P+ + H ++ I TA
Sbjct: 2 DKEILVIDGACGTELQRLGY-DVDADPLWSASLLLTNPQVIKDLHTSYLNAGADIILTAT 60
Query: 318 --ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ 375
ASI P D +E S V +M L R A +A + KP +
Sbjct: 61 YQASI-PGLVQYADLTEASASAVIAMA-VRLAIEARDEFWAEQKACNKNVRRPKPLV--- 115
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
S+GP+G DGSE+ G Y D MT +L WH+P + L++ GVD +A ETIPAEKE
Sbjct: 116 -VGSVGPFGACQHDGSEFHGRYTDEMTIEELKQWHKPRIMELIQNGVDLIAFETIPAEKE 174
Query: 436 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
A+AL+++L F G KAWLSF CKDD H +HGEL + + N +QI AIG NC P
Sbjct: 175 AIALIQVLETFRGVKAWLSFVCKDDLHLNHGELFADVMER--FRNHNQIVAIGTNCTNPQ 232
Query: 496 HVSTLVR-CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554
+V L++ C + I YPN G W SV +W T + YV +W++ G+ I
Sbjct: 233 NVDNLIQSCKRLDAYDKPFIAYPNSGESW-SVD-RWDPTIPPVELSDYVQRWIKNGIRWI 290
Query: 555 GGCCEVTSYEIQQMRIMID 573
GGCC T +I ++R +D
Sbjct: 291 GGCCRTTPSDILKIRNKVD 309
>gi|195035505|ref|XP_001989218.1| GH11602 [Drosophila grimshawi]
gi|193905218|gb|EDW04085.1| GH11602 [Drosophila grimshawi]
Length = 328
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 179/327 (54%), Gaps = 22/327 (6%)
Query: 4 ICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+ ++ + DG F +Q++ H VDG PLWS+ + T P A + TH DF++ GAD+I ++
Sbjct: 3 LTRLLVKDGGFGTQMTVHVGNSVDGDPLWSARFNATNPTAVINTHLDFLQNGADMILTNT 62
Query: 64 YQANVDN-LTKLGYSEQEALDLLHKSVQLMNSAKDK---ENQTPDINLNKTFNLLTGHIE 119
YQ +V+ + L EQE+++L+ +VQL + AK+K E + +N+ + L+
Sbjct: 63 YQTSVEGYMEYLELDEQESIELIKNTVQLAHVAKEKYLTECYEAQLEVNEGYPLII---- 118
Query: 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 179
ASIGP+G L DGSEY+G Y D + + WHR +EA + AGVD LA+ETIP + E
Sbjct: 119 --ASIGPFGAHLHDGSEYTGEYADYVAPKTITDWHRVRIEACLEAGVDALAIETIPCQME 176
Query: 180 ALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLANP---DQIQAIGV 233
A ALV++L ++P K W++F CKD++ +HGE + A + +L D A+GV
Sbjct: 177 AEALVEMLCDDYPDVKFWVAFQCKDESRLAHGEEFADAANAIWDILRERKALDNCLAVGV 236
Query: 234 NCVRPSHVSTLVRCI---KQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLW 290
NCV P V+ L + + + + +VYPN G ++ D + Q H + P W
Sbjct: 237 NCVHPKFVTPLFKSLNGERSVEEQIPLVVYPNSG-EVYDVTTGWQGREHCVPLEKYVPEW 295
Query: 291 SSVYLTTEPEACVETHRDFIRGHIETA 317
+ + C RD IR HI A
Sbjct: 296 AQLGAKIIGGCCRTYARD-IR-HISEA 320
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 163/326 (50%), Gaps = 22/326 (6%)
Query: 269 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLR 328
DG F +Q++ H VDG PLWS+ + T P A + TH DF++ + + Y T +
Sbjct: 10 DGGFGTQMTVHVGNSVDGDPLWSARFNATNPTAVINTHLDFLQNGADMILT-NTYQTSVE 68
Query: 329 DGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA------LIKPSISSQTAASIGP 382
EY + E + I + V+ A YL L ASIGP
Sbjct: 69 GYMEYL-----ELDEQESIELIKNTVQLAHVAKEKYLTECYEAQLEVNEGYPLIIASIGP 123
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
+G L DGSEY+G Y D + + WHR +EA + AGVD LA+ETIP + EA ALV++
Sbjct: 124 FGAHLHDGSEYTGEYADYVAPKTITDWHRVRIEACLEAGVDALAIETIPCQMEAEALVEM 183
Query: 443 L-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLANP---DQIQAIGVNCVRPSH 496
L ++P K W++F CKD++ +HGE + A + +L D A+GVNCV P
Sbjct: 184 LCDDYPDVKFWVAFQCKDESRLAHGEEFADAANAIWDILRERKALDNCLAVGVNCVHPKF 243
Query: 497 VSTLVRCI---KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNI 553
V+ L + + + + +VYPN G V+D V W E + YVP+W + G I
Sbjct: 244 VTPLFKSLNGERSVEEQIPLVVYPNSGEVYD-VTTGWQGREHCVPLEKYVPEWAQLGAKI 302
Query: 554 IGGCCEVTSYEIQQMRIMIDEFNTKK 579
IGGCC + +I+ + + N K
Sbjct: 303 IGGCCRTYARDIRHISEAVHAINNHK 328
>gi|226312609|ref|YP_002772503.1| homocysteine methyltransferase [Brevibacillus brevis NBRC 100599]
gi|226095557|dbj|BAH43999.1| homocysteine S-methyltransferase [Brevibacillus brevis NBRC 100599]
Length = 311
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/260 (40%), Positives = 154/260 (59%), Gaps = 17/260 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ RH D LWS+ L PE H ++ AGAD ++ YQA+V
Sbjct: 15 ILDGAMATELERHGCNLNDS--LWSAKVLMENPELIKRVHTEYFLAGADCAITASYQASV 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ +LG S+++AL L+ SVQ+ A+D+ + D L++ ++ AAS+GPYG
Sbjct: 73 EGFVRLGMSQRDALLLIQASVQIAVQARDEFWKNSDGRLDRPKPIV------AASVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y ++E +LI +HRP ++AL+ AG D LA ETIP EA ALV+LL
Sbjct: 127 AYLADGSEYRGAY--ELSEEELIDFHRPRMKALIDAGADILACETIPCLSEARALVRLLE 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLANPDQIQAIGVNCVRPSHVSTLVR 246
EFPG AW+SFS KD+ H S G +++T C L +QI A+G+NC P ++ LV+
Sbjct: 185 EFPGVYAWISFSAKDELHISDG----TSITECAIWLDKKEQIAALGINCTSPRNIPRLVQ 240
Query: 247 CIKQSHPTVQTIVYPNKGVK 266
I+ S +VYPN G +
Sbjct: 241 EIR-SCTMKPIVVYPNAGER 259
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 157/311 (50%), Gaps = 29/311 (9%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ RH D LWS+ L PE H ++ + A + +V
Sbjct: 15 ILDGAMATELERHGCNLNDS--LWSAKVLMENPELIKRVHTEYFLAGADCAITASYQASV 72
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY-------LALIKPSISSQTAAS 379
G M++ D + + +V+ V+A ++ L KP + AAS
Sbjct: 73 -------EGFVRLGMSQRDALLLIQASVQIAVQARDEFWKNSDGRLDRPKPIV----AAS 121
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
+GPYG L DGSEY G Y ++E +LI +HRP ++AL+ AG D LA ETIP EA AL
Sbjct: 122 VGPYGAYLADGSEYRGAY--ELSEEELIDFHRPRMKALIDAGADILACETIPCLSEARAL 179
Query: 440 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLANPDQIQAIGVNCVRPSHV 497
V+LL EFPG AW+SFS KD+ H S G +++T C L +QI A+G+NC P ++
Sbjct: 180 VRLLEEFPGVYAWISFSAKDELHISDG----TSITECAIWLDKKEQIAALGINCTSPRNI 235
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
LV+ I+ S +VYPN G +D W + +W E G +IGGC
Sbjct: 236 PRLVQEIR-SCTMKPIVVYPNAGERYDPTTKTWYGASSREGYGNNALEWYESGARLIGGC 294
Query: 558 CEVTSYEIQQM 568
C +I+ +
Sbjct: 295 CRTKPEDIKAI 305
>gi|289741865|gb|ADD19680.1| homocysteine S-methyltransferase [Glossina morsitans morsitans]
Length = 331
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 174/312 (55%), Gaps = 20/312 (6%)
Query: 11 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDN 70
DG F +Q++ H VDG PLWS+ + T+P A + TH DF++ GADII ++ YQ +V+
Sbjct: 10 DGGFGTQMTVHVGDAVDGDPLWSARFNATKPAAIINTHLDFLQNGADIILTNTYQTSVEG 69
Query: 71 -LTKLGYSEQEALDLLHKSVQLMNSAKDK---ENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + +E+++++L+ +V+L + AK+K E +N+ + F ++ ASIGP
Sbjct: 70 YMEYMELNEEQSVELIKNTVRLAHIAKEKYLSECCQAGLNITEGFPMII------ASIGP 123
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY+G Y D ++ D+ WHR ++A + AG+D LA+ETIP + EA ALV +
Sbjct: 124 YGAHLHDGSEYTGSYADYLSAKDITDWHRVRIDACLDAGIDALAIETIPCQMEAEALVDM 183
Query: 187 LRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLANPDQIQ---AIGVNCVRPSH 240
L E + K W+SF CKD+ +HGE+ + A S LL N + + AIG NCV P
Sbjct: 184 LCEDYADVKFWISFQCKDEKTLAHGEVFAEAALSVWDLLRNRNAQKNCLAIGANCVHPKF 243
Query: 241 VSTLVRCI---KQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTT 297
V+ L++ + K+ + +VYPN G ++ D H + D P W+ +
Sbjct: 244 VTPLLQSVNAHKKPEEKIPLVVYPNSG-EIYDVDKGWLGKEHCVPLADYVPEWAHLGAKI 302
Query: 298 EPEACVETHRDF 309
C RD
Sbjct: 303 IGGCCRTYARDI 314
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 170/323 (52%), Gaps = 22/323 (6%)
Query: 269 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIET------AASIGP 322
DG F +Q++ H VDG PLWS+ + T+P A + TH DF++ + S+
Sbjct: 10 DGGFGTQMTVHVGDAVDGDPLWSARFNATKPAAIINTHLDFLQNGADIILTNTYQTSVEG 69
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
Y + E S + + IA + E +AG++ I ASIGP
Sbjct: 70 YMEYMELNEEQSVELIKNTVRLAHIAKEKYLSEC-CQAGLNITEGFPMII-----ASIGP 123
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY+G Y D ++ D+ WHR ++A + AG+D LA+ETIP + EA ALV +
Sbjct: 124 YGAHLHDGSEYTGSYADYLSAKDITDWHRVRIDACLDAGIDALAIETIPCQMEAEALVDM 183
Query: 443 LRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLANPDQIQ---AIGVNCVRPSH 496
L E + K W+SF CKD+ +HGE+ + A S LL N + + AIG NCV P
Sbjct: 184 LCEDYADVKFWISFQCKDEKTLAHGEVFAEAALSVWDLLRNRNAQKNCLAIGANCVHPKF 243
Query: 497 VSTLVRCI---KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNI 553
V+ L++ + K+ + +VYPN G ++D V WL E + YVP+W G I
Sbjct: 244 VTPLLQSVNAHKKPEEKIPLVVYPNSGEIYD-VDKGWLGKEHCVPLADYVPEWAHLGAKI 302
Query: 554 IGGCCEVTSYEIQQMRIMIDEFN 576
IGGCC + +I+ ++ + ++N
Sbjct: 303 IGGCCRTYARDIRLIKEAVQDYN 325
>gi|157691021|ref|YP_001485483.1| homocysteine methyltransferase [Bacillus pumilus SAFR-032]
gi|157679779|gb|ABV60923.1| homocysteine S-methyltransferase [Bacillus pumilus SAFR-032]
Length = 312
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/259 (40%), Positives = 153/259 (59%), Gaps = 18/259 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R D LWS+ L +PE + H D+ +AGAD ++ YQ +
Sbjct: 15 ILDGALATELERKGCNLNDS--LWSAKILIEQPELIQQVHLDYFQAGADCATTASYQTTI 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
D + GYS++EA++L+ +SV L A+D Q +T + G S+GP+G
Sbjct: 73 DGFAEKGYSKEEAIELMKRSVTLAKEARDLFWQDEASRNGRTKPFVAG------SVGPFG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G+Y +TE LI +HRP ++ALV AG D LA ETIP EA+A+ KLL+
Sbjct: 127 AYLSDGSEYKGNY--GLTEQALIDFHRPRIQALVEAGADILACETIPCLIEAIAIAKLLQ 184
Query: 189 -EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EF G AW++FS KDD H S G+L+ V + L +QI A+GVNC P ++S+L++
Sbjct: 185 DEFSGVSAWITFSAKDDLHISEGDLLRECVQA--LEPYEQIAAVGVNCTPPQYISSLIQE 242
Query: 248 IKQ--SHPTVQTIVYPNKG 264
+K+ S P V VYPN G
Sbjct: 243 MKKGTSKPIV---VYPNSG 258
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/306 (36%), Positives = 167/306 (54%), Gaps = 24/306 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ R D LWS+ L +PE + H D+ + + A + Y T
Sbjct: 15 ILDGALATELERKGCNLNDS--LWSAKILIEQPELIQQVHLDYFQAGADCATT-ASYQTT 71
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT----AASIGP 382
+ DG G+ ++ + I + +V L + D + S + +T A S+GP
Sbjct: 72 I-DGFAEKGY-----SKEEAIELMKRSV-TLAKEARDLFWQDEASRNGRTKPFVAGSVGP 124
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
+G L DGSEY G+Y +TE LI +HRP ++ALV AG D LA ETIP EA+A+ KL
Sbjct: 125 FGAYLSDGSEYKGNY--GLTEQALIDFHRPRIQALVEAGADILACETIPCLIEAIAIAKL 182
Query: 443 LR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
L+ EF G AW++FS KDD H S G+L+ V + L +QI A+GVNC P ++S+L+
Sbjct: 183 LQDEFSGVSAWITFSAKDDLHISEGDLLRECVQA--LEPYEQIAAVGVNCTPPQYISSLI 240
Query: 502 RCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
+ +K+ S P V VYPN G ++D W +++ QW ++G +IIGGCC
Sbjct: 241 QEMKKGTSKPIV---VYPNSGELYDPEDKVWSGDTPQHTFGECAHQWYQDGAHIIGGCCR 297
Query: 560 VTSYEI 565
T +I
Sbjct: 298 TTPEDI 303
>gi|294497614|ref|YP_003561314.1| homocysteine S-methyltransferase [Bacillus megaterium QM B1551]
gi|294347551|gb|ADE67880.1| homocysteine S-methyltransferase [Bacillus megaterium QM B1551]
Length = 311
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/258 (40%), Positives = 151/258 (58%), Gaps = 13/258 (5%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG+ +++ R+ D LWS+ L +PE H+D+ AGAD ++ YQ+
Sbjct: 13 VIVLDGAMATELERYGCDLNDS--LWSAKVLMEQPELIKRVHQDYFAAGADCAITASYQS 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ K G SE EA +L+ SV++ A+D+ Q + N+ ++ AAS+GP
Sbjct: 71 TFEGFAKRGLSEAEARELIQASVKIAAEARDEFWQQEENRRNRPKPIV------AASVGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L +GSEY+G Y +TE +L+ +HRP ++AL+ AG D LA ETIP EA A+ +L
Sbjct: 125 YGAFLANGSEYTGQY--DVTEEELMEFHRPRMKALIEAGADVLACETIPNVMEARAIARL 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L EF G AW++FS KDD H S G LIS L + +Q+ A+GVNC P ++S+L++
Sbjct: 183 LEEFEGAYAWITFSAKDDLHISSGTLISECAR--YLDSYEQVAALGVNCTPPQYISSLIK 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
IK S IVYPN G
Sbjct: 241 EIK-SQTDKPVIVYPNSG 257
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 156/313 (49%), Gaps = 33/313 (10%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V +LDG+ +++ R+ D LWS+ L +PE H+D+ + A +
Sbjct: 13 VIVLDGAMATELERYGCDLNDS--LWSAKVLMEQPELIKRVHQDYFAAGADCAITASYQS 70
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--------- 375
T + G ++EA+ L++A V A + Q
Sbjct: 71 T-------FEGFAKRGLSEAE--------ARELIQASVKIAAEARDEFWQQEENRRNRPK 115
Query: 376 --TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
AAS+GPYG L +GSEY+G Y +TE +L+ +HRP ++AL+ AG D LA ETIP
Sbjct: 116 PIVAASVGPYGAFLANGSEYTGQY--DVTEEELMEFHRPRMKALIEAGADVLACETIPNV 173
Query: 434 KEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
EA A+ +LL EF G AW++FS KDD H S G LIS L + +Q+ A+GVNC
Sbjct: 174 MEARAIARLLEEFEGAYAWITFSAKDDLHISSGTLISECAR--YLDSYEQVAALGVNCTP 231
Query: 494 PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNI 553
P ++S+L++ IK S IVYPN G +D+ W T + W E G +
Sbjct: 232 PQYISSLIKEIK-SQTDKPVIVYPNSGEHYDAESKTWNGTSAGETYGCSAHSWYEAGAQL 290
Query: 554 IGGCCEVTSYEIQ 566
IGGCC T +I+
Sbjct: 291 IGGCCRTTPDDIK 303
>gi|340368364|ref|XP_003382722.1| PREDICTED: homocysteine S-methyltransferase ybgG-like [Amphimedon
queenslandica]
Length = 301
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/260 (37%), Positives = 160/260 (61%), Gaps = 13/260 (5%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ +LDG +++ R + ++ PLWS+ L T+PE + H+ F++ GADII ++ YQ
Sbjct: 4 RLYILDGGLATEIERRGVSLLN-DPLWSARILHTQPELILNVHKSFLQNGADIITTASYQ 62
Query: 66 ANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
A++D + LG S + AL L+ SV L A+D +Q P+ + ++ L+ G S+
Sbjct: 63 ASIDGYYQHLGLSSENALKLIANSVYLAQEARDWFSQQPE-HKDRAQPLIAG------SV 115
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSEY+G Y++ + + WH+P + L+ +GVD LALETIP+ EA L+
Sbjct: 116 GPYGACLCDGSEYTGAYLNHTSLEVIKDWHKPRIRQLLESGVDLLALETIPSIIEAKILL 175
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
++L ++P KAW+SF+CKD+ HT +GE+ S V + + + Q+ A+G+NC P ++ L
Sbjct: 176 EILADYPQAKAWISFTCKDEGHTCYGEVFSDVVKA--MCSYKQLVAVGINCSPPQYIGGL 233
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
+ + S ++ IVYPN G
Sbjct: 234 LDSV--SGCSLPFIVYPNSG 251
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 165/307 (53%), Gaps = 21/307 (6%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG +++ R + ++ PLWS+ L T+PE + H+ F++ + + ++
Sbjct: 7 ILDGGLATEIERRGVSLLN-DPLWSARILHTQPELILNVHKSFLQNGADIITTASYQASI 65
Query: 327 LRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYLALI---KPSISSQTAASIGP 382
DG Y H + S LIA N L + D+ + K A S+GP
Sbjct: 66 --DG--YYQHLGLSSENALKLIA----NSVYLAQEARDWFSQQPEHKDRAQPLIAGSVGP 117
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY+G Y++ + + WH+P + L+ +GVD LALETIP+ EA L+++
Sbjct: 118 YGACLCDGSEYTGAYLNHTSLEVIKDWHKPRIRQLLESGVDLLALETIPSIIEAKILLEI 177
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
L ++P KAW+SF+CKD+ HT +GE+ S V + + + Q+ A+G+NC P ++ L+
Sbjct: 178 LADYPQAKAWISFTCKDEGHTCYGEVFSDVVKA--MCSYKQLVAVGINCSPPQYIGGLLD 235
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTS 562
+ S ++ IVYPN G W S W ++ S + W+ +GV IIGGCC +T
Sbjct: 236 SV--SGCSLPFIVYPNSGEGWCST--GWCG--EKVSFISQCRTWISKGVKIIGGCCRITP 289
Query: 563 YEIQQMR 569
+I ++
Sbjct: 290 EDINLIK 296
>gi|195114992|ref|XP_002002051.1| GI17170 [Drosophila mojavensis]
gi|193912626|gb|EDW11493.1| GI17170 [Drosophila mojavensis]
Length = 349
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/322 (35%), Positives = 178/322 (55%), Gaps = 25/322 (7%)
Query: 270 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRD 329
G F+SQ++R+ + VDG PLW S + T+P+A ++TH DF+R A I T
Sbjct: 23 GGFSSQLARNVNEKVDGDPLWGSRFDATQPDAVIQTHLDFLR----KGADIILTNTYQSS 78
Query: 330 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL-------IKPSISSQTAASIGP 382
+ H + E+ IA +VE +A YL+ I P + ASIGP
Sbjct: 79 VEGFMKHLGKTREES--IALIAKSVELARQARTKYLSEVAANNGDIGPDMP-WILASIGP 135
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY+G Y + + + L AWH+P ++ + AG+D LA+ET+P + EALA+ L
Sbjct: 136 YGAHLHDGSEYTGSYANLVNFSQLQAWHKPRIDTCLSAGIDGLAVETLPCQLEALAVTDL 195
Query: 443 LRE-FPGQKAWLSFSCKDDTHTSHGELISS---AVTSCLLANPDQ--IQAIGVNCVRPSH 496
L + + W+SF CKD + +HGE + AV + ++ + Q + IGVNCV P++
Sbjct: 196 LLTCYCTPRFWVSFQCKDSSSLAHGESFAEAALAVWNMVVKHKAQSRLLGIGVNCVNPNY 255
Query: 497 VSTLVRCIKQSHP---TVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNI 553
V+ L++ + P TV +VY N+G ++DS +W T + ++ +VP+WL G I
Sbjct: 256 VTPLLKSLLAKLPHGVTVPLVVYSNRGEIYDSDRGEW--TGNGLNVASFVPEWLRLGARI 313
Query: 554 IGGCCEVTSYEIQQMRIMIDEF 575
IGGCC V +I ++R I++
Sbjct: 314 IGGCCRVYPDDIYEIRQTIEDI 335
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 161/268 (60%), Gaps = 23/268 (8%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL 71
G F+SQ++R+ + VDG PLW S + T+P+A ++TH DF+R GADII ++ YQ++V+
Sbjct: 23 GGFSSQLARNVNEKVDGDPLWGSRFDATQPDAVIQTHLDFLRKGADIILTNTYQSSVEGF 82
Query: 72 TK-LGYSEQEALDLLHKSVQLMNSAKDK-----ENQTPDINLNKTFNLLTGHIETAASIG 125
K LG + +E++ L+ KSV+L A+ K DI + + L ASIG
Sbjct: 83 MKHLGKTREESIALIAKSVELARQARTKYLSEVAANNGDIGPDMPWIL--------ASIG 134
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY+G Y + + + L AWH+P ++ + AG+D LA+ET+P + EALA+
Sbjct: 135 PYGAHLHDGSEYTGSYANLVNFSQLQAWHKPRIDTCLSAGIDGLAVETLPCQLEALAVTD 194
Query: 186 LLRE-FPGQKAWLSFSCKDDTHTSHGELISS---AVTSCLLANPDQ--IQAIGVNCVRPS 239
LL + + W+SF CKD + +HGE + AV + ++ + Q + IGVNCV P+
Sbjct: 195 LLLTCYCTPRFWVSFQCKDSSSLAHGESFAEAALAVWNMVVKHKAQSRLLGIGVNCVNPN 254
Query: 240 HVSTLVRCIKQSHP---TVQTIVYPNKG 264
+V+ L++ + P TV +VY N+G
Sbjct: 255 YVTPLLKSLLAKLPHGVTVPLVVYSNRG 282
>gi|194017506|ref|ZP_03056117.1| homocysteine S-methyltransferase 2 (S-methylmethionine:homocysteine
methyltransferase 2) (SMM:Hcy S-methyltransferase 2)
(ZmHMT-2) [Bacillus pumilus ATCC 7061]
gi|194010778|gb|EDW20349.1| homocysteine S-methyltransferase 2 (S-methylmethionine:homocysteine
methyltransferase 2) (SMM:Hcy S-methyltransferase 2)
(ZmHMT-2) [Bacillus pumilus ATCC 7061]
Length = 312
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/259 (40%), Positives = 151/259 (58%), Gaps = 18/259 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R D LWS+ L +PE + H D+ +AGAD ++ YQ +
Sbjct: 15 ILDGALATELERKGCNLNDS--LWSAKILIEQPELIQQVHLDYFKAGADCATTASYQTTI 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
D + GYS++EA++L+ +SV L A+D Q +T + G S+GP+G
Sbjct: 73 DGFAEKGYSKEEAIELMKRSVTLAKEARDLFWQDEARRKGRTKPFVAG------SVGPFG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G+Y +TE LI +HRP ++ALV AG D LA ETIP EA A+ KLL+
Sbjct: 127 AYLSDGSEYKGNY--GLTEQTLIDFHRPRIQALVEAGADILACETIPCLIEATAIAKLLQ 184
Query: 189 -EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EF G AW++FS KDD H S G+L+ V + L +QI A+GVNC P +S+L++
Sbjct: 185 DEFNGVSAWITFSAKDDLHISEGDLLRECVQA--LEPYEQIAAVGVNCTPPQFISSLIQE 242
Query: 248 IKQ--SHPTVQTIVYPNKG 264
+K+ S P V VYPN G
Sbjct: 243 MKKGTSKPIV---VYPNSG 258
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/306 (36%), Positives = 162/306 (52%), Gaps = 24/306 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ R D LWS+ L +PE + H D+ + + A+ Y T
Sbjct: 15 ILDGALATELERKGCNLNDS--LWSAKILIEQPELIQQVHLDYFKAGAD-CATTASYQTT 71
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL----ALIKPSISSQTAASIGP 382
+ DG G+ ++ + I + +V L + D A K A S+GP
Sbjct: 72 I-DGFAEKGY-----SKEEAIELMKRSV-TLAKEARDLFWQDEARRKGRTKPFVAGSVGP 124
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
+G L DGSEY G+Y +TE LI +HRP ++ALV AG D LA ETIP EA A+ KL
Sbjct: 125 FGAYLSDGSEYKGNY--GLTEQTLIDFHRPRIQALVEAGADILACETIPCLIEATAIAKL 182
Query: 443 LR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
L+ EF G AW++FS KDD H S G+L+ V + L +QI A+GVNC P +S+L+
Sbjct: 183 LQDEFNGVSAWITFSAKDDLHISEGDLLRECVQA--LEPYEQIAAVGVNCTPPQFISSLI 240
Query: 502 RCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
+ +K+ S P V VYPN G ++D W +++ QW ++G +IIGGCC
Sbjct: 241 QEMKKGTSKPIV---VYPNSGELYDPEEKVWSGDTLQHTFGECAHQWYQDGAHIIGGCCR 297
Query: 560 VTSYEI 565
T +I
Sbjct: 298 TTPEDI 303
>gi|195437797|ref|XP_002066826.1| GK24684 [Drosophila willistoni]
gi|194162911|gb|EDW77812.1| GK24684 [Drosophila willistoni]
Length = 331
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 176/319 (55%), Gaps = 20/319 (6%)
Query: 4 ICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+ +V + DG F +Q++ H VDG PLWS+ + +T A + TH DF++ GADII ++
Sbjct: 3 LSRVLVKDGGFGTQMTVHVGNSVDGDPLWSARFNSTNMSAVINTHLDFLQNGADIILTNT 62
Query: 64 YQANVDN-LTKLGYSEQEALDLLHKSVQLMNSAKDK---ENQTPDINLNKTFNLLTGHIE 119
YQA+V+ + L E+++++L+ +V+L + AK+K E + + + F L+
Sbjct: 63 YQASVEGYMEYLELDEEQSIELIKNTVRLAHIAKEKYLTECYEAKLAVPEGFPLII---- 118
Query: 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 179
ASIGP+G L DGSEY+G Y D + + WHR +EA V AGVD LA+ETIP + E
Sbjct: 119 --ASIGPFGAHLHDGSEYTGSYADFVPAKTITDWHRQRIEACVEAGVDALAIETIPCQME 176
Query: 180 ALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLANP---DQIQAIGV 233
A ALV++L ++P K W++F CKD+T +HGE + A S +L+ D+ A+GV
Sbjct: 177 AEALVEMLCDDYPDVKFWVAFQCKDETSLAHGESFADAANSIWDILSERNALDKCLAVGV 236
Query: 234 NCVRPSHVSTLVRCI---KQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLW 290
NCV P V+ L + + + + +VYPN G ++ D Q H + + P W
Sbjct: 237 NCVHPKFVTALFKSLNGERSVDEQIPLVVYPNSG-EVYDVLNGWQGREHCVPLANYVPEW 295
Query: 291 SSVYLTTEPEACVETHRDF 309
+ + C RD
Sbjct: 296 AQLGAKIIGGCCRTYARDI 314
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/333 (35%), Positives = 172/333 (51%), Gaps = 25/333 (7%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIET------AA 318
V + DG F +Q++ H VDG PLWS+ + +T A + TH DF++ + A
Sbjct: 6 VLVKDGGFGTQMTVHVGNSVDGDPLWSARFNSTNMSAVINTHLDFLQNGADIILTNTYQA 65
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA-LIKPSISSQTA 377
S+ Y L E S + + IA + E Y A L P
Sbjct: 66 SVEGYMEYLELDEEQSIELIKNTVRLAHIAKEKYLTEC-------YEAKLAVPEGFPLII 118
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
ASIGP+G L DGSEY+G Y D + + WHR +EA V AGVD LA+ETIP + EA
Sbjct: 119 ASIGPFGAHLHDGSEYTGSYADFVPAKTITDWHRQRIEACVEAGVDALAIETIPCQMEAE 178
Query: 438 ALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLANP---DQIQAIGVNC 491
ALV++L ++P K W++F CKD+T +HGE + A S +L+ D+ A+GVNC
Sbjct: 179 ALVEMLCDDYPDVKFWVAFQCKDETSLAHGESFADAANSIWDILSERNALDKCLAVGVNC 238
Query: 492 VRPSHVSTLVRCI---KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLE 548
V P V+ L + + + + +VYPN G V+D ++ W E + +YVP+W +
Sbjct: 239 VHPKFVTALFKSLNGERSVDEQIPLVVYPNSGEVYDVLN-GWQGREHCVPLANYVPEWAQ 297
Query: 549 EGVNIIGGCCEVTSYEIQQMRIMIDEFNT-KKN 580
G IIGGCC + +I+ + I +N KKN
Sbjct: 298 LGAKIIGGCCRTYARDIRHIGEAIRNWNKLKKN 330
>gi|125986259|ref|XP_001356893.1| GA10443 [Drosophila pseudoobscura pseudoobscura]
gi|195148675|ref|XP_002015293.1| GL19626 [Drosophila persimilis]
gi|54645219|gb|EAL33959.1| GA10443 [Drosophila pseudoobscura pseudoobscura]
gi|194107246|gb|EDW29289.1| GL19626 [Drosophila persimilis]
Length = 331
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 176/319 (55%), Gaps = 20/319 (6%)
Query: 4 ICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+ +V + DG F +Q++ H VDG PLWS+ + T P A + TH DF++ GADII ++
Sbjct: 3 LTRVLVKDGGFGTQMTVHVGNSVDGDPLWSARFNATNPAAIINTHLDFLQNGADIILTNT 62
Query: 64 YQANVDN-LTKLGYSEQEALDLLHKSVQLMNSAKDK---ENQTPDINLNKTFNLLTGHIE 119
YQA+V+ + L E ++++L+ +V+L + AK+K E + + + + L+
Sbjct: 63 YQASVEGYMEYLELDEDQSIELIRNTVRLAHIAKEKYLTECYQAQLAVPEGYPLII---- 118
Query: 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 179
ASIGP+G L DGSEY+G Y D + + WHR +EA + AGVD LA+ETIP + E
Sbjct: 119 --ASIGPFGAHLHDGSEYTGSYADYVPAKTITDWHRIRIEACLEAGVDALAIETIPCQME 176
Query: 180 ALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLAN---PDQIQAIGV 233
A ALV++L ++P K W++F CKD++ +HGE + A + +LA D+ A+GV
Sbjct: 177 AEALVEMLCDDYPDVKFWVAFQCKDESTLAHGETFADAANAIWDMLAERNAQDKCLAVGV 236
Query: 234 NCVRPSHVSTLVRCI---KQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLW 290
NCV P V++L + + + + +VYPN G ++ D + H + + P W
Sbjct: 237 NCVHPKFVTSLFKSLNGDRSVEDQIPLVVYPNSG-EVYDVVKGWEGREHCVPLANYVPEW 295
Query: 291 SSVYLTTEPEACVETHRDF 309
S + C RD
Sbjct: 296 SQLGAKIIGGCCRTYARDI 314
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/330 (35%), Positives = 168/330 (50%), Gaps = 22/330 (6%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V + DG F +Q++ H VDG PLWS+ + T P A + TH DF++ + + Y
Sbjct: 6 VLVKDGGFGTQMTVHVGNSVDGDPLWSARFNATNPAAIINTHLDFLQNGADIILT-NTYQ 64
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA------LIKPSISSQTAA 378
+ EY + E I R V A YL L P A
Sbjct: 65 ASVEGYMEYL-----ELDEDQSIELIRNTVRLAHIAKEKYLTECYQAQLAVPEGYPLIIA 119
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
SIGP+G L DGSEY+G Y D + + WHR +EA + AGVD LA+ETIP + EA A
Sbjct: 120 SIGPFGAHLHDGSEYTGSYADYVPAKTITDWHRIRIEACLEAGVDALAIETIPCQMEAEA 179
Query: 439 LVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLAN---PDQIQAIGVNCV 492
LV++L ++P K W++F CKD++ +HGE + A + +LA D+ A+GVNCV
Sbjct: 180 LVEMLCDDYPDVKFWVAFQCKDESTLAHGETFADAANAIWDMLAERNAQDKCLAVGVNCV 239
Query: 493 RPSHVSTLVRCI---KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEE 549
P V++L + + + + +VYPN G V+D V W E + +YVP+W +
Sbjct: 240 HPKFVTSLFKSLNGDRSVEDQIPLVVYPNSGEVYDVVK-GWEGREHCVPLANYVPEWSQL 298
Query: 550 GVNIIGGCCEVTSYEIQQMRIMIDEFNTKK 579
G IIGGCC + +I+ + I +N K
Sbjct: 299 GAKIIGGCCRTYARDIRHIGEAIRNWNKLK 328
>gi|219847788|ref|YP_002462221.1| homocysteine methyltransferase [Chloroflexus aggregans DSM 9485]
gi|219542047|gb|ACL23785.1| homocysteine S-methyltransferase [Chloroflexus aggregans DSM 9485]
Length = 316
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/256 (42%), Positives = 141/256 (55%), Gaps = 13/256 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R D PLWS+ L P H D+ AGAD+ ++ YQA +
Sbjct: 15 VLDGALATELERRGCDLAD--PLWSAKVLIENPTLIQAVHADYFAAGADVAITASYQATI 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G SE EA+ LL +SV L +A+D P + + L+ AASIGPYG
Sbjct: 73 PGFMARGLSEAEAIALLQRSVALARAARDAFWADPANRVGRIRPLV------AASIGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y ++ ADLI +HRP + AL A D A ETIP EA ALV LL
Sbjct: 127 AYLHDGSEYRGEY--GLSVADLIDFHRPRMAALAAAEPDLFACETIPCWDEARALVALLP 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP AW+SFS +D HTS GE I+ V + A+P Q+ AIG+NC P + L+R I
Sbjct: 185 EFPQLTAWISFSARDGAHTSRGEPITEVVAE-IAAHP-QVAAIGINCTAPRFIPDLIRAI 242
Query: 249 KQSHPTVQTIVYPNKG 264
+ S T +VYPN G
Sbjct: 243 R-SVTTKPIVVYPNSG 257
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 161/325 (49%), Gaps = 29/325 (8%)
Query: 252 HPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIR 311
+P Q + + + +LDG+ +++ R D PLWS+ L P H D+
Sbjct: 2 NPIAQALT--QRPLLVLDGALATELERRGCDLAD--PLWSAKVLIENPTLIQAVHADYFA 57
Query: 312 GHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL------ 365
+ A + T+ G ++EA+ IA + +V AL RA D
Sbjct: 58 AGADVAITASYQATI-------PGFMARGLSEAEAIALLQRSV-ALARAARDAFWADPAN 109
Query: 366 --ALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 423
I+P + AASIGPYG L DGSEY G Y ++ ADLI +HRP + AL A D
Sbjct: 110 RVGRIRPLV----AASIGPYGAYLHDGSEYRGEY--GLSVADLIDFHRPRMAALAAAEPD 163
Query: 424 YLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQ 483
A ETIP EA ALV LL EFP AW+SFS +D HTS GE I+ V + A+P Q
Sbjct: 164 LFACETIPCWDEARALVALLPEFPQLTAWISFSARDGAHTSRGEPITEVVAE-IAAHP-Q 221
Query: 484 IQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYV 543
+ AIG+NC P + L+R I+ S T +VYPN G V+D V W+ T +
Sbjct: 222 VAAIGINCTAPRFIPDLIRAIR-SVTTKPIVVYPNSGEVYDPVGQCWIGTTEIDDFAAQA 280
Query: 544 PQWLEEGVNIIGGCCEVTSYEIQQM 568
QW G +IGGCC T I+ +
Sbjct: 281 RQWYAVGARLIGGCCRTTPDHIRAV 305
>gi|172058994|ref|YP_001815454.1| homocysteine methyltransferase [Exiguobacterium sibiricum 255-15]
gi|171991515|gb|ACB62437.1| homocysteine S-methyltransferase [Exiguobacterium sibiricum 255-15]
Length = 310
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/284 (38%), Positives = 157/284 (55%), Gaps = 23/284 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ RH +++D PLWS+ L EPE H ++ + GAD +S YQA+V
Sbjct: 19 LLDGALATELERHG-RNLD-DPLWSARVLLEEPEQIHRVHANYFKIGADCAITSSYQASV 76
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G E+EA++L+ ++V L A+ + D H A SIGPYG
Sbjct: 77 AGFSSRGIKEEEAIELMKQTVYLAQQARAETGPAAD------------HALIAGSIGPYG 124
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY GHY + +A L A+HRP +EAL+ AG D LA ETIP+ +EA L +LL
Sbjct: 125 AYLSDGSEYIGHY--GVDDAQLEAFHRPRLEALIAAGADVLAFETIPSLQEAKMLFRLLE 182
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP Q AWL+FS +D TH S G +S + + L + Q+ AIG NC S + + +
Sbjct: 183 EFPEQSAWLAFSLRDATHISEGTPLSECIEA--LGDHPQLAAIGANCFPASIATEFITTL 240
Query: 249 KQSHPTVQTIVYPNKGVKL--LDGSFTSQVSRHTIKDVDGHPLW 290
KQ V IVYPN G + + +++ + R +D+ P W
Sbjct: 241 KQLT-DVPIIVYPNSGEQYDPVSKTWSGETVRTAFEDI--APEW 281
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 165/325 (50%), Gaps = 21/325 (6%)
Query: 249 KQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRD 308
K ++P Q + K LLDG+ +++ RH +++D PLWS+ L EPE H +
Sbjct: 3 KNNNPVEQLL--KEKPYILLDGALATELERHG-RNLD-DPLWSARVLLEEPEQIHRVHAN 58
Query: 309 FIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALI 368
+ + + A + +V +G + E + I + V +A +
Sbjct: 59 YFKIGADCAITSSYQASV-------AGFSSRGIKEEEAIELMKQTVYLAQQARAE----T 107
Query: 369 KPSIS-SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
P+ + A SIGPYG L DGSEY GHY + +A L A+HRP +EAL+ AG D LA
Sbjct: 108 GPAADHALIAGSIGPYGAYLSDGSEYIGHY--GVDDAQLEAFHRPRLEALIAAGADVLAF 165
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ETIP+ +EA L +LL EFP Q AWL+FS +D TH S G +S + + L + Q+ AI
Sbjct: 166 ETIPSLQEAKMLFRLLEEFPEQSAWLAFSLRDATHISEGTPLSECIEA--LGDHPQLAAI 223
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWL 547
G NC S + + +KQ V IVYPN G +D V W + P+W
Sbjct: 224 GANCFPASIATEFITTLKQLT-DVPIIVYPNSGEQYDPVSKTWSGETVRTAFEDIAPEWY 282
Query: 548 EEGVNIIGGCCEVTSYEIQQMRIMI 572
G +IGGCC T +I ++R ++
Sbjct: 283 AAGARLIGGCCRTTPEQIGEIRKIV 307
>gi|195035503|ref|XP_001989217.1| GH11601 [Drosophila grimshawi]
gi|193905217|gb|EDW04084.1| GH11601 [Drosophila grimshawi]
Length = 349
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 170/320 (53%), Gaps = 24/320 (7%)
Query: 270 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRD 329
G F+SQ++R+ + VDG PLW S + T+P A V+TH DF+R A I T
Sbjct: 22 GGFSSQLARNVNEKVDGDPLWGSRFDCTQPTAVVKTHLDFLR----NGADIILTNTYQSS 77
Query: 330 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT-------AASIGP 382
+ H + E+ IA +V+ A +YLA + + + ASIGP
Sbjct: 78 VEGFMKHLGKTREES--IALIAKSVQLAHDAKSEYLAELAAANNGNIDADMPWILASIGP 135
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY G Y + + L WH ++ + AGVD LA+ET+P + EALA+ +L
Sbjct: 136 YGAHLHDGSEYQGSYANRVNYEQLQQWHTTRIDTCLLAGVDGLAVETLPCQLEALAVTEL 195
Query: 443 -LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-LANPDQIQ----AIGVNCVRPSH 496
L+ K W+SF CKD+ H +HGE + A + L + Q AIGVNCV PS+
Sbjct: 196 ILKRSTTAKFWVSFQCKDELHLAHGESFAGAALAVWRLVQQHEAQSRLLAIGVNCVNPSY 255
Query: 497 VSTLVRCIKQSHPTVQ---TIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNI 553
V+ L+ ++ + Q ++Y N+G V+D+ +W T + + +VPQWL+ G I
Sbjct: 256 VTPLIESLRATMAQEQLPPLVIYSNRGEVYDAERGEWTGT--GLNAISFVPQWLQLGARI 313
Query: 554 IGGCCEVTSYEIQQMRIMID 573
IGGCC V +I ++R ID
Sbjct: 314 IGGCCRVYPDDILEIRKYID 333
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/263 (39%), Positives = 154/263 (58%), Gaps = 12/263 (4%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL 71
G F+SQ++R+ + VDG PLW S + T+P A V+TH DF+R GADII ++ YQ++V+
Sbjct: 22 GGFSSQLARNVNEKVDGDPLWGSRFDCTQPTAVVKTHLDFLRNGADIILTNTYQSSVEGF 81
Query: 72 TK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
K LG + +E++ L+ KSVQL + AK + ++ N+ ASIGPYG
Sbjct: 82 MKHLGKTREESIALIAKSVQLAHDAKSE--YLAELAAANNGNIDADMPWILASIGPYGAH 139
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 189
L DGSEY G Y + + L WH ++ + AGVD LA+ET+P + EALA+ +L L+
Sbjct: 140 LHDGSEYQGSYANRVNYEQLQQWHTTRIDTCLLAGVDGLAVETLPCQLEALAVTELILKR 199
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-LANPDQIQ----AIGVNCVRPSHVSTL 244
K W+SF CKD+ H +HGE + A + L + Q AIGVNCV PS+V+ L
Sbjct: 200 STTAKFWVSFQCKDELHLAHGESFAGAALAVWRLVQQHEAQSRLLAIGVNCVNPSYVTPL 259
Query: 245 VRCIKQSHPTVQ---TIVYPNKG 264
+ ++ + Q ++Y N+G
Sbjct: 260 IESLRATMAQEQLPPLVIYSNRG 282
>gi|168823560|ref|NP_001108360.1| homocysteine S-methyltransferase-like isoform 2 [Danio rerio]
gi|159155523|gb|AAI54543.1| Zgc:172121 protein [Danio rerio]
Length = 307
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/259 (38%), Positives = 150/259 (57%), Gaps = 14/259 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +++ + + G PLWS+ L T+P+A + H ++++G+D+I ++ YQA++
Sbjct: 7 ILDGGLATELEASGFQ-LQGDPLWSARVLHTDPQAIKDVHYRYLQSGSDVITTATYQASI 65
Query: 69 DNLTK-LGYSEQEALDLLHKSVQLMN-SAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ K LG +EA ++ +VQL + + +Q+P + + A S+GP
Sbjct: 66 EGFVKYLGVQPEEAQHMMMSAVQLAKETVSEFISQSPMSDRREPL--------VAGSVGP 117
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG+ L DGSEY+G Y D MT +L WHRP ++ LV+AG D +A+ETIP KEA ALVK+
Sbjct: 118 YGSFLHDGSEYTGAYEDKMTVEELKDWHRPQIQCLVKAGADLVAMETIPGLKEAEALVKV 177
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L+EFP KAWLSFSCKD+ S G S AV + Q+ A+GVNC V L+
Sbjct: 178 LKEFPETKAWLSFSCKDNNSISSGRRFSEAVE--MACRSTQLVAVGVNCCPALLVKPLLE 235
Query: 247 CIK-QSHPTVQTIVYPNKG 264
K + +VYPN G
Sbjct: 236 SAKSHKRADLSWVVYPNSG 254
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 158/313 (50%), Gaps = 28/313 (8%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETA---ASI 320
+LDG +++ + + G PLWS+ L T+P+A + H +++ I TA ASI
Sbjct: 7 ILDGGLATELEASGFQ-LQGDPLWSARVLHTDPQAIKDVHYRYLQSGSDVITTATYQASI 65
Query: 321 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---TA 377
+ L E + H + S + L + V P + A
Sbjct: 66 EGFVKYLGVQPEEAQHMMMSAVQ-------------LAKETVSEFISQSPMSDRREPLVA 112
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
S+GPYG+ L DGSEY+G Y D MT +L WHRP ++ LV+AG D +A+ETIP KEA
Sbjct: 113 GSVGPYGSFLHDGSEYTGAYEDKMTVEELKDWHRPQIQCLVKAGADLVAMETIPGLKEAE 172
Query: 438 ALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
ALVK+L+EFP KAWLSFSCKD+ S G S AV + Q+ A+GVNC V
Sbjct: 173 ALVKVLKEFPETKAWLSFSCKDNNSISSGRRFSEAVE--MACRSTQLVAVGVNCCPALLV 230
Query: 498 STLVRCIK-QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556
L+ K + +VYPN G WD V W TE S + +W +G IGG
Sbjct: 231 KPLLESAKSHKRADLSWVVYPNSGEGWD-VTTGW-KTEMRTSFANLSLEWKAQGALWIGG 288
Query: 557 CCEVTSYEIQQMR 569
CC V +I +++
Sbjct: 289 CCRVRPADITELK 301
>gi|451819335|ref|YP_007455536.1| homocysteine S-methyltransferase [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451785314|gb|AGF56282.1| homocysteine S-methyltransferase [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 312
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/258 (39%), Positives = 148/258 (57%), Gaps = 13/258 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L +PE + H D+ AGAD +S YQA +
Sbjct: 15 ILDGALATELENRGCDINDS--LWSAKILAEKPEMIGKVHYDYFAAGADCAITSSYQATI 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
D + G+SE EA+ L+ +SVQ+ A+D + N+ L+ G S+GPYG
Sbjct: 73 DGFVQKGFSEAEAISLIKRSVQIAKKARDDFWNNSENRKNRPTPLVAG------SVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y ++TE +LI++HRP ++ L+ GVD LA ETIP+ EA A++KLL+
Sbjct: 127 AYLADGSEYRGDY--NITEEELISFHRPRIKLLIEEGVDILACETIPSLMEAKAIIKLLK 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP W+SFSCK++ S G I+ S L + Q+ AIG+NC P +V L+ I
Sbjct: 185 EFPNVYCWISFSCKNELEISDGTPIAECAKS--LDDYSQVAAIGLNCTAPQYVQLLITEI 242
Query: 249 KQSHPTVQTIVYPNKGVK 266
K ++ +VYPN G K
Sbjct: 243 K-NNSNKPIVVYPNSGEK 259
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 156/305 (51%), Gaps = 17/305 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D LWS+ L +PE + H D+ + A + T+
Sbjct: 15 ILDGALATELENRGCDINDS--LWSAKILAEKPEMIGKVHYDYFAAGADCAITSSYQATI 72
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT---AASIGPY 383
G +EA+ I+ + +V+ +A D+ + + T A S+GPY
Sbjct: 73 -------DGFVQKGFSEAEAISLIKRSVQIAKKARDDFWNNSENRKNRPTPLVAGSVGPY 125
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L DGSEY G Y ++TE +LI++HRP ++ L+ GVD LA ETIP+ EA A++KLL
Sbjct: 126 GAYLADGSEYRGDY--NITEEELISFHRPRIKLLIEEGVDILACETIPSLMEAKAIIKLL 183
Query: 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
+EFP W+SFSCK++ S G I+ S L + Q+ AIG+NC P +V L+
Sbjct: 184 KEFPNVYCWISFSCKNELEISDGTPIAECAKS--LDDYSQVAAIGLNCTAPQYVQLLITE 241
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
IK ++ +VYPN G +D+ W +S W E G ++GGCC T
Sbjct: 242 IK-NNSNKPIVVYPNSGEKYDANSKTWHGNSSSHSYCCNAKGWFEAGAKLVGGCCRTTPE 300
Query: 564 EIQQM 568
+I+ +
Sbjct: 301 DIKAI 305
>gi|195387968|ref|XP_002052664.1| GJ17677 [Drosophila virilis]
gi|194149121|gb|EDW64819.1| GJ17677 [Drosophila virilis]
Length = 331
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 173/314 (55%), Gaps = 20/314 (6%)
Query: 11 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDN 70
DG F +Q++ H VDG PLWS+ + T P A + TH DF++ GAD+I ++ YQ +V+
Sbjct: 10 DGGFGTQMTVHVGNSVDGDPLWSARFNATNPTAVINTHLDFLQNGADMILTNTYQTSVEG 69
Query: 71 -LTKLGYSEQEALDLLHKSVQLMNSAKDK---ENQTPDINLNKTFNLLTGHIETAASIGP 126
+ L EQE+++L+ +V+L + AK+K E + + + F L+ ASIGP
Sbjct: 70 YMEYLELDEQESIELIKNTVRLAHIAKEKYLTECYEAQLAVPEGFPLII------ASIGP 123
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
+G L DGSEY+G Y D + + WHR +EA + AGVD LA+ETIP + EA ALV++
Sbjct: 124 FGAHLHDGSEYTGSYADYVEPKTITDWHRVRIEACLEAGVDALAIETIPCQMEAEALVEM 183
Query: 187 L-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLANP---DQIQAIGVNCVRPSH 240
L ++P K W++F CKD++ +HGE + A + +L D+ A+GVNCV P
Sbjct: 184 LCDDYPEVKFWVAFQCKDESTLAHGEDFAEAANAIWDILRERKALDKCLALGVNCVHPKF 243
Query: 241 VSTLVRCI---KQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTT 297
V+ L + + + + + +VYPN G ++ D + Q H + + P W+ +
Sbjct: 244 VTPLFKSLNGERTADEQIPLVVYPNSG-EVYDVTTGWQGREHCVPLENYVPEWTQLGAKI 302
Query: 298 EPEACVETHRDFIR 311
C RD R
Sbjct: 303 IGGCCRTYARDIRR 316
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 167/327 (51%), Gaps = 22/327 (6%)
Query: 269 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLR 328
DG F +Q++ H VDG PLWS+ + T P A + TH DF++ + + Y T +
Sbjct: 10 DGGFGTQMTVHVGNSVDGDPLWSARFNATNPTAVINTHLDFLQNGADMILT-NTYQTSVE 68
Query: 329 DGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA------LIKPSISSQTAASIGP 382
EY + E + I + V A YL L P ASIGP
Sbjct: 69 GYMEYL-----ELDEQESIELIKNTVRLAHIAKEKYLTECYEAQLAVPEGFPLIIASIGP 123
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
+G L DGSEY+G Y D + + WHR +EA + AGVD LA+ETIP + EA ALV++
Sbjct: 124 FGAHLHDGSEYTGSYADYVEPKTITDWHRVRIEACLEAGVDALAIETIPCQMEAEALVEM 183
Query: 443 L-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLANP---DQIQAIGVNCVRPSH 496
L ++P K W++F CKD++ +HGE + A + +L D+ A+GVNCV P
Sbjct: 184 LCDDYPEVKFWVAFQCKDESTLAHGEDFAEAANAIWDILRERKALDKCLALGVNCVHPKF 243
Query: 497 VSTLVRCI---KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNI 553
V+ L + + + + + +VYPN G V+D V W E + +YVP+W + G I
Sbjct: 244 VTPLFKSLNGERTADEQIPLVVYPNSGEVYD-VTTGWQGREHCVPLENYVPEWTQLGAKI 302
Query: 554 IGGCCEVTSYEIQQMRIMIDEFNTKKN 580
IGGCC + +I+++ + N K
Sbjct: 303 IGGCCRTYARDIRRISEAVHAVNKLKK 329
>gi|407478612|ref|YP_006792489.1| Homocysteine S-methyltransferase [Exiguobacterium antarcticum B7]
gi|407062691|gb|AFS71881.1| Homocysteine S-methyltransferase [Exiguobacterium antarcticum B7]
Length = 310
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 105/256 (41%), Positives = 140/256 (54%), Gaps = 19/256 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ RH D PLWS+ L EPE H D+ + GAD +S YQA+V
Sbjct: 19 LLDGALATELERHGSNLED--PLWSARVLLEEPEQIHRVHTDYFKIGADCAITSSYQASV 76
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G E EA++L+ ++V L A+ + Q H A S+GPYG
Sbjct: 77 AGFSSRGIKEDEAIELMKQTVYLAQQARAETGQA------------ASHALIAGSVGPYG 124
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY GHY + +A L A+HRP +EAL+ AG D LA ETIP+ +EA L +LL
Sbjct: 125 AYLSDGSEYVGHY--GVDDAQLEAFHRPRLEALIAAGADVLAFETIPSLQEAKVLFRLLE 182
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP Q AWL+FS ++ TH S G +S + S L Q+ AIG NC S + + +
Sbjct: 183 EFPEQSAWLAFSLRNATHISEGTPLSECIES--LGEHPQLAAIGANCFPASIATDFITTL 240
Query: 249 KQSHPTVQTIVYPNKG 264
KQ V IVYPN G
Sbjct: 241 KQLT-DVPIIVYPNSG 255
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 161/327 (49%), Gaps = 31/327 (9%)
Query: 249 KQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRD 308
K ++P Q + K LLDG+ +++ RH D PLWS+ L EPE H D
Sbjct: 3 KNNNPVEQLL--KEKPYLLLDGALATELERHGSNLED--PLWSARVLLEEPEQIHRVHTD 58
Query: 309 FIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALI 368
+ + + A + +V +G + E + I + V YLA
Sbjct: 59 YFKIGADCAITSSYQASV-------AGFSSRGIKEDEAIELMKQTV---------YLAQQ 102
Query: 369 KPSISSQTAA------SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGV 422
+ + Q A+ S+GPYG L DGSEY GHY + +A L A+HRP +EAL+ AG
Sbjct: 103 ARAETGQAASHALIAGSVGPYGAYLSDGSEYVGHY--GVDDAQLEAFHRPRLEALIAAGA 160
Query: 423 DYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPD 482
D LA ETIP+ +EA L +LL EFP Q AWL+FS ++ TH S G +S + S L
Sbjct: 161 DVLAFETIPSLQEAKVLFRLLEEFPEQSAWLAFSLRNATHISEGTPLSECIES--LGEHP 218
Query: 483 QIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHY 542
Q+ AIG NC S + + +KQ V IVYPN G +D V W +
Sbjct: 219 QLAAIGANCFPASIATDFITTLKQLT-DVPIIVYPNSGEQYDPVSKTWSGEAVCTAFEDV 277
Query: 543 VPQWLEEGVNIIGGCCEVTSYEIQQMR 569
P+W G +IGGCC T +I++++
Sbjct: 278 APEWYAAGARLIGGCCRTTPEQIERIQ 304
>gi|308071460|ref|YP_003873065.1| homocysteine S-methyltransferase (S-methylmethionine:homocysteine
methyltransferase) [Paenibacillus polymyxa E681]
gi|305860739|gb|ADM72527.1| Homocysteine S-methyltransferase (S-methylmethionine:homocysteine
methyltransferase) [Paenibacillus polymyxa E681]
Length = 315
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/256 (41%), Positives = 149/256 (58%), Gaps = 10/256 (3%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ RH D LWS+ L PE+ HRD+ AGAD ++ YQA V
Sbjct: 15 VLDGAMATELERHGHDLNDS--LWSAKILHEHPESIKHVHRDYFEAGADCAITASYQATV 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ K G +E EAL+L+ SV++ A+D+ D+ + + AAS+GPYG
Sbjct: 73 EGYIKRGLNENEALELIQSSVRIAVQARDE--FWADVTATASQRHRPKPL-VAASVGPYG 129
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y ++E L+ +HRP ++AL+ AG D LA ETIP EA A+ +LL+
Sbjct: 130 AFLADGSEYRGDY--KLSEEQLMEFHRPRMKALIEAGADILACETIPCLVEAKAIARLLK 187
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFPG AW+SFS KD H S+GE S+A + L +Q+ AIG+NC P V +L+ I
Sbjct: 188 EFPGTYAWISFSAKDGQHISNGE--SAAACAEWLNWHEQVAAIGINCTLPKFVPSLIHEI 245
Query: 249 KQSHPTVQTIVYPNKG 264
+ SH +VYPN G
Sbjct: 246 R-SHTDKPVVVYPNLG 260
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 109/308 (35%), Positives = 161/308 (52%), Gaps = 20/308 (6%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ RH D LWS+ L PE+ HRD+ + A + TV
Sbjct: 15 VLDGAMATELERHGHDLNDS--LWSAKILHEHPESIKHVHRDYFEAGADCAITASYQATV 72
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ------TAASI 380
G+ + E + + + +V V+A ++ A + + S + AAS+
Sbjct: 73 -------EGYIKRGLNENEALELIQSSVRIAVQARDEFWADVTATASQRHRPKPLVAASV 125
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GPYG L DGSEY G Y ++E L+ +HRP ++AL+ AG D LA ETIP EA A+
Sbjct: 126 GPYGAFLADGSEYRGDY--KLSEEQLMEFHRPRMKALIEAGADILACETIPCLVEAKAIA 183
Query: 441 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 500
+LL+EFPG AW+SFS KD H S+GE S+A + L +Q+ AIG+NC P V +L
Sbjct: 184 RLLKEFPGTYAWISFSAKDGQHISNGE--SAAACAEWLNWHEQVAAIGINCTLPKFVPSL 241
Query: 501 VRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEV 560
+ I+ SH +VYPN G +D V W + + QW E G +IGGCC
Sbjct: 242 IHEIR-SHTDKPVVVYPNLGEEYDPVTKTWHGSTCTETFGQSARQWYEAGARLIGGCCRT 300
Query: 561 TSYEIQQM 568
+I+++
Sbjct: 301 QPQDIEEI 308
>gi|384157835|ref|YP_005539908.1| homocysteine methyltransferase [Bacillus amyloliquefaciens TA208]
gi|384166852|ref|YP_005548230.1| homocysteine methyltransferase [Bacillus amyloliquefaciens XH7]
gi|328551923|gb|AEB22415.1| homocysteine methyltransferase [Bacillus amyloliquefaciens TA208]
gi|341826131|gb|AEK87382.1| homocysteine methyltransferase [Bacillus amyloliquefaciens XH7]
Length = 315
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 160/312 (51%), Gaps = 20/312 (6%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
YP V ++DG+ +++ R D LWS+ L PE + H ++ + A +
Sbjct: 11 YP---VMIIDGAMATELERMGCDLNDD--LWSAKILLERPELIKQVHAEYFAAGADCAIT 65
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSI---SSQT 376
T+ G + E D I + +VE V+A ++ A + I
Sbjct: 66 ASYQSTI-------EGFAARGIPETDAIRLIQTSVELAVQARDEFWAHEENRIHRPKPLI 118
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
AASIGPYG L DGSEY GHY +TE +LI++HRP ++AL+ +G D LA ETIP EA
Sbjct: 119 AASIGPYGASLADGSEYRGHY--GLTEDELISFHRPRMKALIESGADLLACETIPCLSEA 176
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
A+ KLL EFPG AW+SFS KD H S G IS + LL + QI AIG+NC H
Sbjct: 177 KAITKLLEEFPGTYAWISFSAKDGRHISEGTPISEC--AALLDSCSQIAAIGINCTPIEH 234
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556
+ L+ IK++ + I YPN G +D V W+ T E W E GV++IGG
Sbjct: 235 IPPLIEEIKRAA-SKPIIAYPNSGEQYDPVTKTWIGTACENHFGKSAQSWYENGVSLIGG 293
Query: 557 CCEVTSYEIQQM 568
CC +IQ +
Sbjct: 294 CCRTKPADIQAI 305
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 102/258 (39%), Positives = 146/258 (56%), Gaps = 13/258 (5%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V ++DG+ +++ R D LWS+ L PE + H ++ AGAD ++ YQ+
Sbjct: 13 VMIIDGAMATELERMGCDLNDD--LWSAKILLERPELIKQVHAEYFAAGADCAITASYQS 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
++ G E +A+ L+ SV+L A+D+ + +++ L+ AASIGP
Sbjct: 71 TIEGFAARGIPETDAIRLIQTSVELAVQARDEFWAHEENRIHRPKPLI------AASIGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY GHY +TE +LI++HRP ++AL+ +G D LA ETIP EA A+ KL
Sbjct: 125 YGASLADGSEYRGHY--GLTEDELISFHRPRMKALIESGADLLACETIPCLSEAKAITKL 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L EFPG AW+SFS KD H S G IS + LL + QI AIG+NC H+ L+
Sbjct: 183 LEEFPGTYAWISFSAKDGRHISEGTPISEC--AALLDSCSQIAAIGINCTPIEHIPPLIE 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
IK++ + I YPN G
Sbjct: 241 EIKRAA-SKPIIAYPNSG 257
>gi|194759568|ref|XP_001962019.1| GF14646 [Drosophila ananassae]
gi|190615716|gb|EDV31240.1| GF14646 [Drosophila ananassae]
Length = 329
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 170/317 (53%), Gaps = 24/317 (7%)
Query: 270 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRD 329
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+ + + Y + +
Sbjct: 18 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIKTHLDFLHSGADIILT-NTYQSSVDG 76
Query: 330 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA----ASIGPYGT 385
+Y G V +LI R +V+ A YL K + S T ASIGPYG
Sbjct: 77 FVKYLG--VSKERGKELI---RKSVQLAQEAKAQYL---KETASDSTLPLILASIGPYGA 128
Query: 386 VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LR 444
L DGSEYSG Y D +T+ L WHR +E + GV+ LALET+P + EA A+ +L L
Sbjct: 129 CLHDGSEYSGSYADKITKKQLQEWHRTRIEICLAEGVNGLALETLPCQLEAEAVTELVLD 188
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-LANPDQIQ----AIGVNCVRPSHVST 499
+ G W+SF C+D+ + GE + A S L Q Q IGVNCV P V+
Sbjct: 189 SYEGVNFWVSFQCQDNARLASGESYAQAALSIWRLVQQRQAQHRLLGIGVNCVNPQFVTP 248
Query: 500 LVRCIKQ---SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556
L+ + S+ + +VY N+G ++D+ +W T ++ ++ +VP+W++ G I+GG
Sbjct: 249 LLTSFLKAAGSNEKIPLVVYSNRGEIYDAEQGEWTGTGEQ--VVKFVPEWIQLGAGIVGG 306
Query: 557 CCEVTSYEIQQMRIMID 573
CC V ++ ++R +D
Sbjct: 307 CCRVYPSDVLEIRQYVD 323
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/263 (39%), Positives = 150/263 (57%), Gaps = 18/263 (6%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL 71
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+ +GADII ++ YQ++VD
Sbjct: 18 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIKTHLDFLHSGADIILTNTYQSSVDGF 77
Query: 72 TK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
K LG S++ +L+ KSVQL AK + + + T L+ ASIGPYG
Sbjct: 78 VKYLGVSKERGKELIRKSVQLAQEAKAQ--YLKETASDSTLPLIL------ASIGPYGAC 129
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL-LRE 189
L DGSEYSG Y D +T+ L WHR +E + GV+ LALET+P + EA A+ +L L
Sbjct: 130 LHDGSEYSGSYADKITKKQLQEWHRTRIEICLAEGVNGLALETLPCQLEAEAVTELVLDS 189
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-LANPDQIQ----AIGVNCVRPSHVSTL 244
+ G W+SF C+D+ + GE + A S L Q Q IGVNCV P V+ L
Sbjct: 190 YEGVNFWVSFQCQDNARLASGESYAQAALSIWRLVQQRQAQHRLLGIGVNCVNPQFVTPL 249
Query: 245 VRCIKQ---SHPTVQTIVYPNKG 264
+ + S+ + +VY N+G
Sbjct: 250 LTSFLKAAGSNEKIPLVVYSNRG 272
>gi|168823508|ref|NP_001108386.1| homocysteine S-methyltransferase-like isoform 1 [Danio rerio]
gi|158253828|gb|AAI53991.1| Zgc:171603 protein [Danio rerio]
Length = 311
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/259 (38%), Positives = 149/259 (57%), Gaps = 14/259 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +++ + G PLWS+ L T+P+A + H ++++G+D+I ++ YQA++
Sbjct: 11 ILDGGLATELEASGFL-LQGDPLWSARVLHTDPQAIKDVHYRYLQSGSDVITTATYQASI 69
Query: 69 DNLTK-LGYSEQEALDLLHKSVQLMN-SAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ K LG +EA ++ +VQL + + +Q+P + + A S+GP
Sbjct: 70 EGFVKYLGVQPEEAQHMMMSAVQLAKETVSEFISQSPMSDRREPL--------VAGSVGP 121
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG+ L DGSEY+G Y D MT +L WHRP ++ LV+AG D +A+ETIP KEA ALV++
Sbjct: 122 YGSFLHDGSEYTGAYEDKMTVEELKDWHRPQIQCLVKAGADLVAMETIPGLKEAEALVEV 181
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L+EFP KAWLSFSCKD+ S G S AV + Q+ A+GVNC V L+
Sbjct: 182 LKEFPETKAWLSFSCKDNNSISSGRRFSEAVE--MACRSTQLVAVGVNCCPAPLVKPLLE 239
Query: 247 CIK-QSHPTVQTIVYPNKG 264
K + +VYPN G
Sbjct: 240 SAKSHKRADLSWVVYPNSG 258
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 157/313 (50%), Gaps = 28/313 (8%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETA---ASI 320
+LDG +++ + G PLWS+ L T+P+A + H +++ I TA ASI
Sbjct: 11 ILDGGLATELEASGFL-LQGDPLWSARVLHTDPQAIKDVHYRYLQSGSDVITTATYQASI 69
Query: 321 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---TA 377
+ L E + H + S + L + V P + A
Sbjct: 70 EGFVKYLGVQPEEAQHMMMSAVQ-------------LAKETVSEFISQSPMSDRREPLVA 116
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
S+GPYG+ L DGSEY+G Y D MT +L WHRP ++ LV+AG D +A+ETIP KEA
Sbjct: 117 GSVGPYGSFLHDGSEYTGAYEDKMTVEELKDWHRPQIQCLVKAGADLVAMETIPGLKEAE 176
Query: 438 ALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
ALV++L+EFP KAWLSFSCKD+ S G S AV + Q+ A+GVNC V
Sbjct: 177 ALVEVLKEFPETKAWLSFSCKDNNSISSGRRFSEAVE--MACRSTQLVAVGVNCCPAPLV 234
Query: 498 STLVRCIK-QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556
L+ K + +VYPN G WD V W TE S + +W +G IGG
Sbjct: 235 KPLLESAKSHKRADLSWVVYPNSGEGWD-VTTGW-KTEMRTSFANLSLEWKAQGALWIGG 292
Query: 557 CCEVTSYEIQQMR 569
CC V +I +++
Sbjct: 293 CCRVRPADITELK 305
>gi|213511026|ref|NP_001133262.1| Homocysteine S-methyltransferase [Salmo salar]
gi|209148170|gb|ACI32923.1| Homocysteine S-methyltransferase [Salmo salar]
Length = 335
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/316 (35%), Positives = 165/316 (52%), Gaps = 16/316 (5%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
+G ++DG +++ K + G PLWS+ L T P+ + H F+ + +
Sbjct: 14 GRGPLIIDGGLATELESTGCK-LQGDPLWSARLLHTNPQTIKDAHYRFLCAGADVITTAT 72
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT---AA 378
+V ++ H + +A+ + + L R V + +P + A
Sbjct: 73 YQASV----EGFTRHLDVTPEQANQLIM---SGVTLARETVKHFMADQPPSDRRVPLVAG 125
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG L +GSEY+G Y M+ +L AWHRP V LV AGVD +A+ETIP+ KEA A
Sbjct: 126 SVGPYGAFLHNGSEYTGAYAAEMSVEELKAWHRPQVHCLVTAGVDLIAMETIPSVKEAEA 185
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
LV+LLREFP KAWL+FSCKD S S AV L + Q+ A+GVNC P+ V
Sbjct: 186 LVELLREFPDSKAWLAFSCKDGQCISDSSRFSEAVL--LASRSSQLVAVGVNCCPPALVK 243
Query: 499 TLVRCIK-QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNIIGG 556
L+ + Q P + +VYPN G WD+ + W E+ SI +W+++G +IGG
Sbjct: 244 PLLDSARTQRRPGLGWVVYPNSGEEWDT-YSGWRKPENRLSSIAELSLEWMKQGSALIGG 302
Query: 557 CCEVTSYEIQQMRIMI 572
CC ++ I ++R I
Sbjct: 303 CCRISPAHIAELRRQI 318
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 105/260 (40%), Positives = 147/260 (56%), Gaps = 16/260 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG +++ K + G PLWS+ L T P+ + H F+ AGAD+I ++ YQA+V
Sbjct: 19 IIDGGLATELESTGCK-LQGDPLWSARLLHTNPQTIKDAHYRFLCAGADVITTATYQASV 77
Query: 69 DNLTK-LGYSEQEALDLLHKSVQLMNSAKD--KENQTPDINLNKTFNLLTGHIETAASIG 125
+ T+ L + ++A L+ V L +Q P ++ L+ G S+G
Sbjct: 78 EGFTRHLDVTPEQANQLIMSGVTLARETVKHFMADQPPS---DRRVPLVAG------SVG 128
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L +GSEY+G Y M+ +L AWHRP V LV AGVD +A+ETIP+ KEA ALV+
Sbjct: 129 PYGAFLHNGSEYTGAYAAEMSVEELKAWHRPQVHCLVTAGVDLIAMETIPSVKEAEALVE 188
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
LLREFP KAWL+FSCKD S S AV L + Q+ A+GVNC P+ V L+
Sbjct: 189 LLREFPDSKAWLAFSCKDGQCISDSSRFSEAVL--LASRSSQLVAVGVNCCPPALVKPLL 246
Query: 246 RCIK-QSHPTVQTIVYPNKG 264
+ Q P + +VYPN G
Sbjct: 247 DSARTQRRPGLGWVVYPNSG 266
>gi|310644707|ref|YP_003949466.1| homocysteine s-methyltransferase ybgg [Paenibacillus polymyxa SC2]
gi|309249658|gb|ADO59225.1| Homocysteine S-methyltransferase ybgG [Paenibacillus polymyxa SC2]
gi|392305363|emb|CCI71726.1| homocysteine S-methyltransferase [Paenibacillus polymyxa M1]
Length = 315
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/260 (40%), Positives = 148/260 (56%), Gaps = 18/260 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGH----PLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
+LDG+ +++ RH GH LWS+ L P++ HRD+ AGAD ++ Y
Sbjct: 15 VLDGAMATELERH------GHDLNDSLWSAKILYEYPDSIKRVHRDYFEAGADCAITASY 68
Query: 65 QANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
QA V+ + G SE EAL L+ SVQ+ A+D+ D+ + + AAS+
Sbjct: 69 QATVEGYVQRGLSENEALKLIQSSVQIALQARDE--FWADVTATASQQHRPKPL-VAASV 125
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSEY G Y ++E L+ +HRP ++AL+ AG D LA ETIP EA A+
Sbjct: 126 GPYGAFLADGSEYRGDY--KLSEEQLMEFHRPRMKALIEAGADILACETIPCLVEAKAIA 183
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
+LL+EFPG AW+SFS KD+ H S+GE S A + L +Q+ A+G+NC P + +L
Sbjct: 184 RLLKEFPGTYAWISFSAKDEQHISNGE--SVAACAKWLNEHEQVAAVGINCTLPKFIPSL 241
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
+ I SH +VYPN G
Sbjct: 242 IHEI-HSHTDKPVVVYPNLG 260
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 162/312 (51%), Gaps = 28/312 (8%)
Query: 267 LLDGSFTSQVSRHTIKDVDGH----PLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
+LDG+ +++ RH GH LWS+ L P++ HRD+ + A +
Sbjct: 15 VLDGAMATELERH------GHDLNDSLWSAKILYEYPDSIKRVHRDYFEAGADCAITASY 68
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ------T 376
TV G+ ++E + + + +V+ ++A ++ A + + S Q
Sbjct: 69 QATV-------EGYVQRGLSENEALKLIQSSVQIALQARDEFWADVTATASQQHRPKPLV 121
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
AAS+GPYG L DGSEY G Y ++E L+ +HRP ++AL+ AG D LA ETIP EA
Sbjct: 122 AASVGPYGAFLADGSEYRGDY--KLSEEQLMEFHRPRMKALIEAGADILACETIPCLVEA 179
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
A+ +LL+EFPG AW+SFS KD+ H S+GE S A + L +Q+ A+G+NC P
Sbjct: 180 KAIARLLKEFPGTYAWISFSAKDEQHISNGE--SVAACAKWLNEHEQVAAVGINCTLPKF 237
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556
+ +L+ I SH +VYPN G +D V W + QW + G +IGG
Sbjct: 238 IPSLIHEI-HSHTDKPVVVYPNLGEEYDPVTKTWQGHTCTETFGQSARQWYKAGARMIGG 296
Query: 557 CCEVTSYEIQQM 568
CC +I+++
Sbjct: 297 CCRTQPQDIKEI 308
>gi|309790678|ref|ZP_07685229.1| homocysteine S-methyltransferase [Oscillochloris trichoides DG-6]
gi|308227272|gb|EFO80949.1| homocysteine S-methyltransferase [Oscillochloris trichoides DG6]
Length = 318
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 143/256 (55%), Gaps = 14/256 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R D PLWS+ L EP+ E H D+ RAGAD ++ YQA
Sbjct: 15 ILDGALATELERRGADLND--PLWSARLLLEEPDLIREVHADYFRAGADCAITASYQATF 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G Q A +L+ +SV+L A+D T D H AASIGPYG
Sbjct: 73 PGFARRGLGHQAASELMRRSVRLACDARDAVWATLDHTRRP-------HPLVAASIGPYG 125
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y ++++ADL+A+HRP + L AG D LALETIP+ +EA L++LL
Sbjct: 126 AFLHDGSEYRGDY--TISDADLLAFHRPRMAVLSDAGADLLALETIPSFREAQLLLRLLE 183
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP AW+SFS +D H S G ++ V +A Q+ A+GVNC P +V+ L+R +
Sbjct: 184 EFPQTWAWMSFSARDGQHISDGTPFATCVAE--IAQHPQVAAVGVNCTAPGYVAELLR-V 240
Query: 249 KQSHPTVQTIVYPNKG 264
+ T + YPN G
Sbjct: 241 ARDLTTKPLLAYPNSG 256
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 155/305 (50%), Gaps = 16/305 (5%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
+ N G+ +LDG+ +++ R D PLWS+ L EP+ E H D+ R + A
Sbjct: 7 ILQNFGLVILDGALATELERRGADLND--PLWSARLLLEEPDLIREVHADYFRAGADCAI 64
Query: 319 SIGPYGTVLRDGSEYSGHYVDS--MTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT 376
+ T GH S M + +A + V A +D+ P +
Sbjct: 65 TASYQATFPGFARRGLGHQAASELMRRSVRLAC---DARDAVWATLDHTRRPHPLV---- 117
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
AASIGPYG L DGSEY G Y ++++ADL+A+HRP + L AG D LALETIP+ +EA
Sbjct: 118 AASIGPYGAFLHDGSEYRGDY--TISDADLLAFHRPRMAVLSDAGADLLALETIPSFREA 175
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
L++LL EFP AW+SFS +D H S G ++ V +A Q+ A+GVNC P +
Sbjct: 176 QLLLRLLEEFPQTWAWMSFSARDGQHISDGTPFATCVAE--IAQHPQVAAVGVNCTAPGY 233
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556
V+ L+R + + T + YPN G ++D W +W EG +I+GG
Sbjct: 234 VAELLR-VARDLTTKPLLAYPNSGEIYDPATHAWCGIASVGDYAAEAQKWYAEGASILGG 292
Query: 557 CCEVT 561
CC T
Sbjct: 293 CCRTT 297
>gi|389571651|ref|ZP_10161741.1| homocysteine methyltransferase [Bacillus sp. M 2-6]
gi|388428764|gb|EIL86559.1| homocysteine methyltransferase [Bacillus sp. M 2-6]
Length = 315
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/261 (39%), Positives = 154/261 (59%), Gaps = 22/261 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R D LWS+ L +PE + H D+ +AGAD ++ YQ +
Sbjct: 18 ILDGALATELERKGCDLNDS--LWSAKILIEQPELIQQVHLDYFQAGADCATTASYQTTI 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGP 126
D K GY+++EA++L+ +SV L A ++ +++T K F A S+GP
Sbjct: 76 DGFAKKGYTKEEAIELMKRSVTLAKEACEQFWQDETHRKERTKPF--------VAGSVGP 127
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
+G L DGSEY G+Y +TE LI +HRP ++ALV +G D LA ETIP EA+A+ KL
Sbjct: 128 FGAYLSDGSEYKGNY--GLTEQALIDFHRPRIQALVESGADILACETIPCLIEAIAIAKL 185
Query: 187 LR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
L+ EF G AW++FS KD H S G+L+ V + L +QI A+GVNC P ++S+L+
Sbjct: 186 LQDEFSGVYAWITFSAKDGQHISEGDLLKDCVQA--LEPYEQIAAVGVNCTPPQYMSSLI 243
Query: 246 RCIKQ--SHPTVQTIVYPNKG 264
+ +K+ S P V VYPN G
Sbjct: 244 QEMKKGTSKPIV---VYPNSG 261
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 158/304 (51%), Gaps = 20/304 (6%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ R D LWS+ L +PE + H D+ + + A+ Y T
Sbjct: 18 ILDGALATELERKGCDLNDS--LWSAKILIEQPELIQQVHLDYFQAGAD-CATTASYQTT 74
Query: 327 LRDGSEYSGHYVDSMTE--ADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
+ DG G+ + E + + E + KP + A S+GP+G
Sbjct: 75 I-DGFAKKGYTKEEAIELMKRSVTLAKEACEQFWQDETHRKERTKPFV----AGSVGPFG 129
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
L DGSEY G+Y +TE LI +HRP ++ALV +G D LA ETIP EA+A+ KLL+
Sbjct: 130 AYLSDGSEYKGNY--GLTEQALIDFHRPRIQALVESGADILACETIPCLIEAIAIAKLLQ 187
Query: 445 -EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
EF G AW++FS KD H S G+L+ V + L +QI A+GVNC P ++S+L++
Sbjct: 188 DEFSGVYAWITFSAKDGQHISEGDLLKDCVQA--LEPYEQIAAVGVNCTPPQYMSSLIQE 245
Query: 504 IKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVT 561
+K+ S P V VYPN G ++D W ++ QW ++G IIGGCC T
Sbjct: 246 MKKGTSKPIV---VYPNSGELYDPEEKVWRGDTSHHTFGECAQQWYKDGAQIIGGCCRTT 302
Query: 562 SYEI 565
+I
Sbjct: 303 PEDI 306
>gi|374321182|ref|YP_005074311.1| homocysteine methyltransferase [Paenibacillus terrae HPL-003]
gi|357200191|gb|AET58088.1| homocysteine methyltransferase [Paenibacillus terrae HPL-003]
Length = 326
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/258 (39%), Positives = 152/258 (58%), Gaps = 10/258 (3%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG+ +++ RH D LWS+ L PE+ HR++ AGAD ++ YQA
Sbjct: 13 VIVLDGAMATELERHGHDLNDS--LWSAKILHEHPESIKRVHREYFEAGADCAITASYQA 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
V+ + G +E EAL+L+ SV++ A+D+ DI + AAS+GP
Sbjct: 71 TVEGYVQRGLNENEALELIQSSVRIAVQARDE--FWADITSGAKQQHRPKPL-VAASVGP 127
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y +++E L+ +HRP ++AL+ AG D LA ETIP EA A+ +L
Sbjct: 128 YGAFLADGSEYRGDY--TLSEEQLVEFHRPRMKALIEAGADILACETIPCLVEAKAIARL 185
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L+EFPG AW+SFS KD H S+GE S+A + L +Q+ A+G+NC P ++ +L++
Sbjct: 186 LKEFPGTYAWISFSAKDGQHISNGE--SAAECAEWLDEHEQVAAVGINCTLPQYIPSLIQ 243
Query: 247 CIKQSHPTVQTIVYPNKG 264
++ SH +VYPN G
Sbjct: 244 EMR-SHTDKPVVVYPNLG 260
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/315 (34%), Positives = 165/315 (52%), Gaps = 23/315 (7%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
YP V +LDG+ +++ RH D LWS+ L PE+ HR++ + A +
Sbjct: 11 YP---VIVLDGAMATELERHGHDLNDS--LWSAKILHEHPESIKRVHREYFEAGADCAIT 65
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---- 375
TV G+ + E + + + +V V+A ++ A I Q
Sbjct: 66 ASYQATV-------EGYVQRGLNENEALELIQSSVRIAVQARDEFWADITSGAKQQHRPK 118
Query: 376 --TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
AAS+GPYG L DGSEY G Y +++E L+ +HRP ++AL+ AG D LA ETIP
Sbjct: 119 PLVAASVGPYGAFLADGSEYRGDY--TLSEEQLVEFHRPRMKALIEAGADILACETIPCL 176
Query: 434 KEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
EA A+ +LL+EFPG AW+SFS KD H S+GE S+A + L +Q+ A+G+NC
Sbjct: 177 VEAKAIARLLKEFPGTYAWISFSAKDGQHISNGE--SAAECAEWLDEHEQVAAVGINCTL 234
Query: 494 PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNI 553
P ++ +L++ ++ SH +VYPN G +D V W T + +W E G +
Sbjct: 235 PQYIPSLIQEMR-SHTDKPVVVYPNLGEEYDPVTKTWHGTSCTETFGQSARKWYEAGARL 293
Query: 554 IGGCCEVTSYEIQQM 568
IGGCC +I+++
Sbjct: 294 IGGCCRTQPQDIKEV 308
>gi|357011163|ref|ZP_09076162.1| homocysteine methyltransferase [Paenibacillus elgii B69]
Length = 313
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/268 (41%), Positives = 150/268 (55%), Gaps = 15/268 (5%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG+ ++++ RH D PLWS+ L P + H D+ AGAD +S YQA
Sbjct: 13 VIILDGALSTELERHGCNIDD--PLWSAKILMENPGLIGKVHTDYFEAGADCAITSSYQA 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
++D K G SE +A DL+ SV++ A+D T + L+ AAS+GP
Sbjct: 71 SIDGFVKQGLSEAQATDLIQNSVRIAVRARDAFWDTWKDKSARPRPLV------AASVGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y +TE +LI +HRP V+ALV AG D LA ETIP+ EA A+V L
Sbjct: 125 YGAYLADGSEYRGDY--RLTERELIEFHRPRVKALVEAGADLLACETIPSLLEAKAIVAL 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L+EFP AW+SFS KD S GE + L QI A+GVNC P ++ +L+
Sbjct: 183 LQEFPQVCAWMSFSAKDGERISSGERMDECAE--WLDEQRQIAALGVNCTPPKYIPSLIH 240
Query: 247 CI-KQSHPTVQTIVYPNKGVKLLDGSFT 273
I K++ + +VYPN G + G+ T
Sbjct: 241 EIGKKTQKPI--LVYPNSGEQYAAGTRT 266
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 153/308 (49%), Gaps = 19/308 (6%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V +LDG+ ++++ RH D PLWS+ L P + H D+ + A +
Sbjct: 13 VIILDGALSTELERHGCNIDD--PLWSAKILMENPGLIGKVHTDYFEAGADCAITSSYQA 70
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---TAASIG 381
++ G ++EA + +V VRA + K + AAS+G
Sbjct: 71 SI-------DGFVKQGLSEAQATDLIQNSVRIAVRARDAFWDTWKDKSARPRPLVAASVG 123
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG L DGSEY G Y +TE +LI +HRP V+ALV AG D LA ETIP+ EA A+V
Sbjct: 124 PYGAYLADGSEYRGDY--RLTERELIEFHRPRVKALVEAGADLLACETIPSLLEAKAIVA 181
Query: 442 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
LL+EFP AW+SFS KD S GE + L QI A+GVNC P ++ +L+
Sbjct: 182 LLQEFPQVCAWMSFSAKDGERISSGERMDECAE--WLDEQRQIAALGVNCTPPKYIPSLI 239
Query: 502 RCI-KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEV 560
I K++ + +VYPN G + + W E S+ W +G +IGGCC
Sbjct: 240 HEIGKKTQKPI--LVYPNSGEQYAAGTRTWHGAASEESLGCSAKAWYGQGARLIGGCCRT 297
Query: 561 TSYEIQQM 568
T +I+ +
Sbjct: 298 TPDDIRSI 305
>gi|255528284|ref|ZP_05395098.1| homocysteine S-methyltransferase [Clostridium carboxidivorans P7]
gi|255508019|gb|EET84445.1| homocysteine S-methyltransferase [Clostridium carboxidivorans P7]
Length = 310
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 146/256 (57%), Gaps = 13/256 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L P+ + H D+ AGAD +S YQA++
Sbjct: 15 ILDGALATELENRGCNINDA--LWSAKILAENPKMIEKVHYDYFCAGADCAITSSYQASI 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ K G+S+ EA+ L+ +SV + A++ + P +N+ F L+ G S+GPYG
Sbjct: 73 EGFIKKGFSKDEAVSLIKRSVTIAKKAREDFWKEPSNRVNRAFPLIAG------SVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G+ S+ E +LI +HRP +E LV VD LA ET+P+ EA A+VKLL+
Sbjct: 127 AYLADGSEYRGY--SSINEENLINFHRPRMEILVGEKVDILACETLPSLLEAKAIVKLLK 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP W+SFSCK+ S G IS L + +Q+ AIGVNC P +V +L+ I
Sbjct: 185 EFPETYCWISFSCKNALEISDGTPISECAK--FLDSCEQVAAIGVNCTAPQYVQSLIEEI 242
Query: 249 KQSHPTVQTIVYPNKG 264
K+ + +VYPN G
Sbjct: 243 KK-NSNKPVVVYPNSG 257
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 150/305 (49%), Gaps = 17/305 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D LWS+ L P+ + H D+ + A + ++
Sbjct: 15 ILDGALATELENRGCNINDA--LWSAKILAENPKMIEKVHYDYFCAGADCAITSSYQASI 72
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---TAASIGPY 383
G ++ + ++ + +V +A D+ ++ A S+GPY
Sbjct: 73 -------EGFIKKGFSKDEAVSLIKRSVTIAKKAREDFWKEPSNRVNRAFPLIAGSVGPY 125
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L DGSEY G+ S+ E +LI +HRP +E LV VD LA ET+P+ EA A+VKLL
Sbjct: 126 GAYLADGSEYRGY--SSINEENLINFHRPRMEILVGEKVDILACETLPSLLEAKAIVKLL 183
Query: 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
+EFP W+SFSCK+ S G IS L + +Q+ AIGVNC P +V +L+
Sbjct: 184 KEFPETYCWISFSCKNALEISDGTPISECAK--FLDSCEQVAAIGVNCTAPQYVQSLIEE 241
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
IK+ + +VYPN G +D+ W S W ++G +IIGGCC T
Sbjct: 242 IKK-NSNKPVVVYPNSGEEYDANSKTWHGNSSCKSYSCNAKGWFDKGASIIGGCCRTTPE 300
Query: 564 EIQQM 568
+I+ +
Sbjct: 301 DIKAI 305
>gi|332529802|ref|ZP_08405756.1| homocysteine methyltransferase [Hylemonella gracilis ATCC 19624]
gi|332040823|gb|EGI77195.1| homocysteine methyltransferase [Hylemonella gracilis ATCC 19624]
Length = 322
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 143/256 (55%), Gaps = 13/256 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R D PLWS+ L +P+ + H D+ AGAD+ ++ YQA
Sbjct: 19 VLDGALATELERRGADLKD--PLWSAKLLIEQPDLIRQVHLDYFVAGADVSTTASYQATF 76
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ + G EA DL+ +SVQL A+D P + L+ AAS+GPYG
Sbjct: 77 EAFARRGLGHDEAADLMRRSVQLACEARDAFWSDPKHRAGRRKPLV------AASVGPYG 130
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
+L DGSEY G+ ++ A L A+HRP ++ L +G D LA ET+P EALA+ LL
Sbjct: 131 AMLADGSEYRGY--PGVSRAALAAFHRPRLQVLAHSGADLLACETLPCLAEALAITDLLP 188
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFPG +AW+SFSC+D H S GE ++ V + L Q+ A+GVNC P V +LV
Sbjct: 189 EFPGVQAWISFSCRDGEHNSQGEPLADCVAA--LDPVPQVAAVGVNCTAPEFVPSLVERA 246
Query: 249 KQSHPTVQTIVYPNKG 264
+ + + +VYPN G
Sbjct: 247 R-ARTSKPIVVYPNSG 261
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/328 (32%), Positives = 160/328 (48%), Gaps = 31/328 (9%)
Query: 251 SHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFI 310
+HP Q + +G+ +LDG+ +++ R D PLWS+ L +P+ + H D+
Sbjct: 5 THPLQQAL--DEQGLFVLDGALATELERRGADLKD--PLWSAKLLIEQPDLIRQVHLDYF 60
Query: 311 RGHIE---TAASIGPYGTVLRDG------SEYSGHYVDSMTEADLIAWHRPNVEALVRAG 361
+ TA+ + R G ++ V EA W P A R
Sbjct: 61 VAGADVSTTASYQATFEAFARRGLGHDEAADLMRRSVQLACEARDAFWSDPKHRAGRR-- 118
Query: 362 VDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG 421
KP + AAS+GPYG +L DGSEY G+ ++ A L A+HRP ++ L +G
Sbjct: 119 -------KPLV----AASVGPYGAMLADGSEYRGY--PGVSRAALAAFHRPRLQVLAHSG 165
Query: 422 VDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP 481
D LA ET+P EALA+ LL EFPG +AW+SFSC+D H S GE ++ V + L
Sbjct: 166 ADLLACETLPCLAEALAITDLLPEFPGVQAWISFSCRDGEHNSQGEPLADCVAA--LDPV 223
Query: 482 DQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILH 541
Q+ A+GVNC P V +LV + + + +VYPN G +D+V W +
Sbjct: 224 PQVAAVGVNCTAPEFVPSLVERAR-ARTSKPIVVYPNSGEHYDAVGKVWQGEGQAHDFAA 282
Query: 542 YVPQWLEEGVNIIGGCCEVTSYEIQQMR 569
+W G +IGGCC +I+ +R
Sbjct: 283 QAMRWHNRGARLIGGCCRTGPDDIRALR 310
>gi|375311326|ref|ZP_09776581.1| homocysteine S-methyltransferase (S-methylmethionine:homocysteine
methyltransferase) [Paenibacillus sp. Aloe-11]
gi|375076506|gb|EHS54759.1| homocysteine S-methyltransferase (S-methylmethionine:homocysteine
methyltransferase) [Paenibacillus sp. Aloe-11]
Length = 315
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 153/261 (58%), Gaps = 20/261 (7%)
Query: 9 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG+ +++ R H + D LWS+ L PEA H+D+ AGAD ++ YQA
Sbjct: 15 VLDGAMATELERQGHDLND----SLWSAKILHEHPEAIKRVHKDYFEAGADCAITASYQA 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK---ENQTPDINLNKTFNLLTGHIETAAS 123
V+ + G SE EAL+L+ SV++ A+D+ E ++ L+ AAS
Sbjct: 71 TVEGYVQRGLSENEALELIQSSVRIAVQARDEFWAEAANAANQQHRPKPLV------AAS 124
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G Y ++E L+ +HRP ++AL+ AG D LA ETIP EA A+
Sbjct: 125 VGPYGAFLADGSEYRGDY--ELSEEQLVEFHRPRMKALIEAGADILACETIPCLVEAKAI 182
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
+LL+EFPG AW+SFS KD H S+GE ++A + L + +Q+ A+G+NC P + +
Sbjct: 183 ARLLKEFPGTYAWISFSAKDGQHISNGE--TAAACAEWLNDHEQVAAVGLNCTLPKFIPS 240
Query: 244 LVRCIKQSHPTVQTIVYPNKG 264
L++ ++ SH +VYPN G
Sbjct: 241 LIQEMR-SHTDKPVVVYPNLG 260
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 163/310 (52%), Gaps = 24/310 (7%)
Query: 267 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+LDG+ +++ R H + D LWS+ L PEA H+D+ + A +
Sbjct: 15 VLDGAMATELERQGHDLND----SLWSAKILHEHPEAIKRVHKDYFEAGADCAITASYQA 70
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ------TAA 378
TV G+ ++E + + + +V V+A ++ A + + Q AA
Sbjct: 71 TV-------EGYVQRGLSENEALELIQSSVRIAVQARDEFWAEAANAANQQHRPKPLVAA 123
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG L DGSEY G Y ++E L+ +HRP ++AL+ AG D LA ETIP EA A
Sbjct: 124 SVGPYGAFLADGSEYRGDY--ELSEEQLVEFHRPRMKALIEAGADILACETIPCLVEAKA 181
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
+ +LL+EFPG AW+SFS KD H S+GE ++A + L + +Q+ A+G+NC P +
Sbjct: 182 IARLLKEFPGTYAWISFSAKDGQHISNGE--TAAACAEWLNDHEQVAAVGLNCTLPKFIP 239
Query: 499 TLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
+L++ ++ SH +VYPN G +D V W + QW E G +IGGCC
Sbjct: 240 SLIQEMR-SHTDKPVVVYPNLGEEYDPVTKTWHGHTCAETFGQSARQWYEAGARLIGGCC 298
Query: 559 EVTSYEIQQM 568
+I+++
Sbjct: 299 RTQPQDIKEI 308
>gi|308172111|ref|YP_003918816.1| homocysteine S-methyltransferase [Bacillus amyloliquefaciens DSM 7]
gi|384162630|ref|YP_005544009.1| homocysteine S-methyltransferase [Bacillus amyloliquefaciens LL3]
gi|307604975|emb|CBI41346.1| homocysteine S-methyltransferase [Bacillus amyloliquefaciens DSM 7]
gi|328910185|gb|AEB61781.1| homocysteine S-methyltransferase [Bacillus amyloliquefaciens LL3]
Length = 316
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 116/313 (37%), Positives = 162/313 (51%), Gaps = 21/313 (6%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
YP V ++DG+ +++ R D LWS+ L PE + H ++ + A +
Sbjct: 11 YP---VMIIDGAMATELERMGCDLNDD--LWSAKILLERPELIKQVHAEYFAAGADCAIT 65
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSI---SSQT 376
T+ G + E D I + +VE V+A ++ A + I
Sbjct: 66 ASYQSTI-------EGFAARGIPETDAIRLIQTSVELAVQARDEFWAHEENRIHRPKPLI 118
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
AASIGPYG L DGSEY GHY +TE +LI++HRP ++AL+ +G D LA ETIP EA
Sbjct: 119 AASIGPYGASLADGSEYRGHY--GLTEDELISFHRPRMKALIESGADLLACETIPCLSEA 176
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
A+ KLL EFPG AW+SFS KD H S G IS + LL + QI AIG+NC H
Sbjct: 177 KAITKLLEEFPGTYAWISFSAKDGRHISEGTPISEC--AALLDSCSQIAAIGINCTPIEH 234
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYV-PQWLEEGVNIIG 555
+ TL+ IK++ + I YPN G +D V W+ E + W E+GV++IG
Sbjct: 235 IPTLIEEIKRAA-SKPIIAYPNSGEQYDPVTKTWIGAACENNFGKSAQSSWYEKGVSLIG 293
Query: 556 GCCEVTSYEIQQM 568
GCC +IQ +
Sbjct: 294 GCCRTKPADIQAI 306
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/258 (39%), Positives = 147/258 (56%), Gaps = 13/258 (5%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V ++DG+ +++ R D LWS+ L PE + H ++ AGAD ++ YQ+
Sbjct: 13 VMIIDGAMATELERMGCDLNDD--LWSAKILLERPELIKQVHAEYFAAGADCAITASYQS 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
++ G E +A+ L+ SV+L A+D+ + +++ L+ AASIGP
Sbjct: 71 TIEGFAARGIPETDAIRLIQTSVELAVQARDEFWAHEENRIHRPKPLI------AASIGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY GHY +TE +LI++HRP ++AL+ +G D LA ETIP EA A+ KL
Sbjct: 125 YGASLADGSEYRGHY--GLTEDELISFHRPRMKALIESGADLLACETIPCLSEAKAITKL 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L EFPG AW+SFS KD H S G IS + LL + QI AIG+NC H+ TL+
Sbjct: 183 LEEFPGTYAWISFSAKDGRHISEGTPISEC--AALLDSCSQIAAIGINCTPIEHIPTLIE 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
IK++ + I YPN G
Sbjct: 241 EIKRAA-SKPIIAYPNSG 257
>gi|347539363|ref|YP_004846788.1| homocysteine S-methyltransferase [Pseudogulbenkiania sp. NH8B]
gi|345642541|dbj|BAK76374.1| homocysteine S-methyltransferase [Pseudogulbenkiania sp. NH8B]
Length = 321
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/259 (38%), Positives = 140/259 (54%), Gaps = 14/259 (5%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG+ +++ + D PLWS+ L EPE + H D+ AGAD+ ++ YQA
Sbjct: 18 VLILDGALATELQQRGCDLND--PLWSARVLIEEPELIRQVHEDYFAAGADVATTASYQA 75
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + GY + A L+ ++V L A+D P + L+ AAS+GP
Sbjct: 76 TFEGFARRGYDAEAAAGLMRRAVTLAVEARDAFWSDPAHRQGRPKPLV------AASVGP 129
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L DGSEY G Y + E L+ +HRP ++ L+ AG D LA ETIP + EA AL +L
Sbjct: 130 YGAMLADGSEYRGDY--GLGEQQLMDFHRPRLKVLLEAGADLLACETIPCQVEARALARL 187
Query: 187 L-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
L EFP +AW+SFSCKD HT GE ++ AV L Q+ A+GVNC P + LV
Sbjct: 188 LAEEFPSARAWISFSCKDGAHTCQGETLADAVAE--LNEVGQVVAVGVNCTAPEFIPALV 245
Query: 246 RCIKQSHPTVQTIVYPNKG 264
T +VYPN G
Sbjct: 246 -AAAHGATTKPLLVYPNSG 263
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 131/365 (35%), Gaps = 125/365 (34%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFI--------- 310
YP V +LDG+ +++ + D PLWS+ L EPE + H D+
Sbjct: 16 YP---VLILDGALATELQQRGCDLND--PLWSARVLIEEPELIRQVHEDYFAAGADVATT 70
Query: 311 ------------RGHIETAA-----------------------------------SIGPY 323
RG+ AA S+GPY
Sbjct: 71 ASYQATFEGFARRGYDAEAAAGLMRRAVTLAVEARDAFWSDPAHRQGRPKPLVAASVGPY 130
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPY 383
G +L DGSEY G Y + E L+ +HRP ++ L+ AG D LA +I Q
Sbjct: 131 GAMLADGSEYRGDY--GLGEQQLMDFHRPRLKVLLEAGADLLAC--ETIPCQ-------- 178
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
V++ A L+A P+ A
Sbjct: 179 --------------VEARALARLLAEEFPSARA--------------------------- 197
Query: 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
W+SFSCKD HT GE ++ AV L Q+ A+GVNC P + LV
Sbjct: 198 --------WISFSCKDGAHTCQGETLADAVAE--LNEVGQVVAVGVNCTAPEFIPALV-A 246
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
T +VYPN G +D H W D W + G +IGGCC T
Sbjct: 247 AAHGATTKPLLVYPNSGEHYDPEHKCWHGHADANRFAEAARGWHQAGARLIGGCCRTTPQ 306
Query: 564 EIQQM 568
+I+ +
Sbjct: 307 DIRAV 311
>gi|47218900|emb|CAG05666.1| unnamed protein product [Tetraodon nigroviridis]
Length = 372
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/278 (39%), Positives = 148/278 (53%), Gaps = 28/278 (10%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG + + + + G PLWS+ L T P+A + H F+ +GAD+I ++ YQA+V
Sbjct: 18 ILDGGLATDLEAQGVH-LQGDPLWSARLLYTNPQAIRDAHCRFLLSGADVISTATYQASV 76
Query: 69 DN-LTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIET------- 120
+ + L S + A +L+ VQL A E+ P N N T G + +
Sbjct: 77 EGFMDHLNVSSEGAKELIMSGVQLAKEAV--ESFVPGTNPNTTVQSGEGKVNSEGSEGLA 134
Query: 121 ------------AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY 168
A S+GPYG L +GSEY+G Y + M+ +L AWHRP VE L A D
Sbjct: 135 GQCSSGRRCPLVAGSLGPYGAFLHNGSEYTGDYAEKMSVQELKAWHRPQVECLAAAEADV 194
Query: 169 LALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN-PDQ 227
LA ETIP+ KEA ALV+LL+EFP KAWLS SCKD S G L AV +AN +Q
Sbjct: 195 LAFETIPSIKEAEALVELLKEFPNTKAWLSLSCKDVKRLSDGSLFRDAVQ---IANRSEQ 251
Query: 228 IQAIGVNCVRPSHVSTLVRCIKQ-SHPTVQTIVYPNKG 264
+ A+GVNC P V L+ + P + +VYPN G
Sbjct: 252 LIAVGVNCCPPELVEPLLDSARTLLSPEISWVVYPNSG 289
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/331 (35%), Positives = 165/331 (49%), Gaps = 28/331 (8%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETA- 317
+ G +LDG + + + + G PLWS+ L T P+A + H F+ I TA
Sbjct: 13 DDGPFILDGGLATDLEAQGVH-LQGDPLWSARLLYTNPQAIRDAHCRFLLSGADVISTAT 71
Query: 318 --ASIGPYGTVLRDGSEYSGHYVDSMTE------ADLIAWHRPNV-----EALVRA-GVD 363
AS+ + L SE + + S + + PN E V + G +
Sbjct: 72 YQASVEGFMDHLNVSSEGAKELIMSGVQLAKEAVESFVPGTNPNTTVQSGEGKVNSEGSE 131
Query: 364 YLALIKPS--ISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG 421
LA S A S+GPYG L +GSEY+G Y + M+ +L AWHRP VE L A
Sbjct: 132 GLAGQCSSGRRCPLVAGSLGPYGAFLHNGSEYTGDYAEKMSVQELKAWHRPQVECLAAAE 191
Query: 422 VDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN- 480
D LA ETIP+ KEA ALV+LL+EFP KAWLS SCKD S G L AV +AN
Sbjct: 192 ADVLAFETIPSIKEAEALVELLKEFPNTKAWLSLSCKDVKRLSDGSLFRDAVQ---IANR 248
Query: 481 PDQIQAIGVNCVRPSHVSTLVRCIKQ-SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-S 538
+Q+ A+GVNC P V L+ + P + +VYPN G WD W +E +
Sbjct: 249 SEQLIAVGVNCCPPELVEPLLDSARTLLSPEISWVVYPNSGESWDP-EQGWCTSEAALPA 307
Query: 539 ILHYVPQWLEEGVNIIGGCCEVTSYEIQQMR 569
+L W+++G +IGGCC ++ + ++R
Sbjct: 308 LLEMSGTWVKQGAALIGGCCRISPAHVAKLR 338
>gi|195387966|ref|XP_002052663.1| GJ17676 [Drosophila virilis]
gi|194149120|gb|EDW64818.1| GJ17676 [Drosophila virilis]
Length = 350
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 170/322 (52%), Gaps = 25/322 (7%)
Query: 270 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRD 329
G F+SQ++R+ + VDG PLW S + T+P A V+TH DF+R A I T
Sbjct: 23 GGFSSQLARNVQEKVDGDPLWGSRFDATQPAAVVKTHLDFLR----NGADIILTNTYQSS 78
Query: 330 GSEYSGHYVDSMTEA-DLIAWHRPNVEALVRAGVDYLALIKPSISS------QTAASIGP 382
+ H S E+ +LIA +V +A +L + S + ASIGP
Sbjct: 79 VEGFMKHLGKSREESIELIA---KSVHLARQAKSQHLGELATSNGNIAPDMPWIMASIGP 135
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY+G Y + + L WH ++ + AGVD LA+ET+P + EA+A+ +L
Sbjct: 136 YGAHLHDGSEYAGSYANLVNFTQLQQWHTVRIDTCLSAGVDGLAVETLPCQLEAMAVTEL 195
Query: 443 -LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSH 496
L + + W+SF CKD + +HGE + A + ++ IGVNCV PS+
Sbjct: 196 ILSRYATARFWVSFQCKDASSLAHGESFAQAAMAVWRLVQEFKAQSRLLGIGVNCVNPSY 255
Query: 497 VSTLVRCIKQSHP---TVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNI 553
V+ L++ + P + +VY N+G ++DS +W T + ++ +VP+WL+ G I
Sbjct: 256 VTPLLKSLLAITPPDEKIPLVVYSNRGEIYDSERGEW--TGNGLNVTSFVPEWLQLGARI 313
Query: 554 IGGCCEVTSYEIQQMRIMIDEF 575
IGGCC V +I ++R ID+
Sbjct: 314 IGGCCRVYPDDILEIRNTIDKI 335
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 153/266 (57%), Gaps = 19/266 (7%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL 71
G F+SQ++R+ + VDG PLW S + T+P A V+TH DF+R GADII ++ YQ++V+
Sbjct: 23 GGFSSQLARNVQEKVDGDPLWGSRFDATQPAAVVKTHLDFLRNGADIILTNTYQSSVEGF 82
Query: 72 TK-LGYSEQEALDLLHKSVQLMNSAKDK---ENQTPDINLNKTFNLLTGHIETAASIGPY 127
K LG S +E+++L+ KSV L AK + E T + N+ + ASIGPY
Sbjct: 83 MKHLGKSREESIELIAKSVHLARQAKSQHLGELATSNGNIAPDMPWIM------ASIGPY 136
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL- 186
G L DGSEY+G Y + + L WH ++ + AGVD LA+ET+P + EA+A+ +L
Sbjct: 137 GAHLHDGSEYAGSYANLVNFTQLQQWHTVRIDTCLSAGVDGLAVETLPCQLEAMAVTELI 196
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHV 241
L + + W+SF CKD + +HGE + A + ++ IGVNCV PS+V
Sbjct: 197 LSRYATARFWVSFQCKDASSLAHGESFAQAAMAVWRLVQEFKAQSRLLGIGVNCVNPSYV 256
Query: 242 STLVRCIKQSHP---TVQTIVYPNKG 264
+ L++ + P + +VY N+G
Sbjct: 257 TPLLKSLLAITPPDEKIPLVVYSNRG 282
>gi|260881752|ref|ZP_05405152.2| homocysteine S-methyltransferase [Mitsuokella multacida DSM 20544]
gi|260848320|gb|EEX68327.1| homocysteine S-methyltransferase [Mitsuokella multacida DSM 20544]
Length = 315
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 144/256 (56%), Gaps = 13/256 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+F ++++R D LWS+ L +PE HRD+ AGADI S+ YQA V
Sbjct: 18 VLDGAFGTELARRGFDTND--ELWSAKALFEKPELVEAVHRDYYEAGADISTSASYQATV 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ K G++ ++A +L+ +SV+L+ A+D Q + + L AAS+GPYG
Sbjct: 76 EGFEKKGFTREQAKELIVRSVRLVQQARDAFWQQRAKRVGRPQPL------AAASVGPYG 129
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y + A+L +H + LV AG D LA ET+P EA A++ LR
Sbjct: 130 AYLADGSEYRGDY--GASRAELADFHAERLAILVSAGPDILACETLPLLDEARAILDDLR 187
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+P AW+SFSCKD HT G+ I+ LL Q+ AIGVNC P +V+ L+R I
Sbjct: 188 RYPDAGAWISFSCKDAEHTCGGDAIADCAR--LLDKESQVAAIGVNCTAPQYVADLIRNI 245
Query: 249 KQSHPTVQTIVYPNKG 264
+ +H +VYPN G
Sbjct: 246 R-AHTAKPVVVYPNTG 260
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 149/300 (49%), Gaps = 13/300 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+F ++++R D LWS+ L +PE HRD+ + + S TV
Sbjct: 18 VLDGAFGTELARRGFDTND--ELWSAKALFEKPELVEAVHRDYYEAGADISTSASYQATV 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+G E G + E LI V+ A A AAS+GPYG
Sbjct: 76 --EGFEKKGFTREQAKE--LIVRSVRLVQQARDAFWQQRAKRVGRPQPLAAASVGPYGAY 131
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y + A+L +H + LV AG D LA ET+P EA A++ LR +
Sbjct: 132 LADGSEYRGDY--GASRAELADFHAERLAILVSAGPDILACETLPLLDEARAILDDLRRY 189
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P AW+SFSCKD HT G+ I+ LL Q+ AIGVNC P +V+ L+R I+
Sbjct: 190 PDAGAWISFSCKDAEHTCGGDAIADCAR--LLDKESQVAAIGVNCTAPQYVADLIRNIR- 246
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQ 566
+H +VYPN G +D+V W + Y +V QW E G +IGGCC T +I+
Sbjct: 247 AHTAKPVVVYPNTGETYDAVTKTWHGSPTPYH--DFVRQWYEAGARLIGGCCRTTPDDIR 304
>gi|348513609|ref|XP_003444334.1| PREDICTED: homocysteine S-methyltransferase 1-like [Oreochromis
niloticus]
Length = 333
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/258 (39%), Positives = 141/258 (54%), Gaps = 17/258 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG + + H K + G PLWS+ L T+P+A + H F+ +GAD+I ++ YQA++
Sbjct: 36 ILDGGLATDLEAHGAK-LQGDPLWSARLLHTDPQAIRDAHYRFLLSGADVITTATYQASI 94
Query: 69 DN-LTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPY 127
++ L S + A +LL V L K F A S+GPY
Sbjct: 95 PGFISHLEVSAERARELLMSGVHLAKETV------------KGFESGQRRPLVAGSVGPY 142
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY+G Y + M+ +L WHRP ++ L AG D +A ETIP+ KEA A+V+LL
Sbjct: 143 GAFLHDGSEYTGAYAEQMSVEELKVWHRPQIDCLAAAGADLIAFETIPSIKEAEAVVELL 202
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
REFP KAWLSFSCKD S G L + AV + + Q+ A+GVNC P V L+
Sbjct: 203 REFPNSKAWLSFSCKDQKCISDGSLFADAVR--VASRSRQLLAVGVNCCPPDVVEPLLDS 260
Query: 248 IKQSHPT-VQTIVYPNKG 264
H + + +VYPN G
Sbjct: 261 AGPLHTSDMSWVVYPNSG 278
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/342 (34%), Positives = 172/342 (50%), Gaps = 33/342 (9%)
Query: 239 SHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTE 298
S V+ L++C + T + ++G +LDG + + H K + G PLWS+ L T+
Sbjct: 8 SPVNFLMKCCSMGSSALLTQMVNDEGPLILDGGLATDLEAHGAK-LQGDPLWSARLLHTD 66
Query: 299 PEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV 358
P+A + H F+ + A + T + H S A L+
Sbjct: 67 PQAIRDAHYRFLL----SGADVITTATYQASIPGFISHLEVSAERA----------RELL 112
Query: 359 RAGVDYLA--LIKPSISSQ----TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRP 412
+GV +LA +K S Q A S+GPYG L DGSEY+G Y + M+ +L WHRP
Sbjct: 113 MSGV-HLAKETVKGFESGQRRPLVAGSVGPYGAFLHDGSEYTGAYAEQMSVEELKVWHRP 171
Query: 413 NVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSA 472
++ L AG D +A ETIP+ KEA A+V+LLREFP KAWLSFSCKD S G L + A
Sbjct: 172 QIDCLAAAGADLIAFETIPSIKEAEAVVELLREFPNSKAWLSFSCKDQKCISDGSLFADA 231
Query: 473 VTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPT-VQTIVYPNKGGVWDSVHMKWL 531
V + + Q+ A+GVNC P V L+ H + + +VYPN G WD+ W
Sbjct: 232 VR--VASRSRQLLAVGVNCCPPDVVEPLLDSAGPLHTSDMSWVVYPNSGEEWDT-ERGWQ 288
Query: 532 DTEDEYSILHYVP----QWLEEGVNIIGGCCEVTSYEIQQMR 569
+ + + P W+++G +IGGCC + I ++R
Sbjct: 289 TSGKPSA---WTPDLSHMWVKQGAALIGGCCRIDPAHIAELR 327
>gi|429503756|ref|YP_007184940.1| homocysteine methyltransferase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429485346|gb|AFZ89270.1| homocysteine methyltransferase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 315
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/258 (39%), Positives = 146/258 (56%), Gaps = 13/258 (5%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V ++DG+ +++ R D LWS+ L PE + H ++ AGAD ++ YQ+
Sbjct: 13 VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAITASYQS 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
++ G E +A+ L+ SV+L A+D+ + L++ L+ AASIGP
Sbjct: 71 TIEGFAARGIPETDAIRLIQTSVELAAQARDEFWAHEENRLHRPKPLV------AASIGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY GHY +TE +LI++HRP ++AL+ +G D LA ETIP EA A+ +L
Sbjct: 125 YGASLADGSEYRGHY--GLTEDELISFHRPRMKALIESGADLLACETIPCLSEAKAITRL 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L EFPG AW+SFS KD H S G IS + LL + QI AIG+NC H+ L+
Sbjct: 183 LEEFPGTYAWISFSAKDGRHISEGTPISEC--AALLDSCSQIAAIGINCTPIEHIPPLIE 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
IK+S + I YPN G
Sbjct: 241 EIKRS-ASKPIIAYPNSG 257
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/314 (36%), Positives = 158/314 (50%), Gaps = 24/314 (7%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
YP V ++DG+ +++ R D LWS+ L PE + H ++ + A +
Sbjct: 11 YP---VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAIT 65
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA-----LIKPSISS 374
T+ G + E D I + +VE +A ++ A L +P
Sbjct: 66 ASYQSTI-------EGFAARGIPETDAIRLIQTSVELAAQARDEFWAHEENRLHRPK--P 116
Query: 375 QTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 434
AASIGPYG L DGSEY GHY +TE +LI++HRP ++AL+ +G D LA ETIP
Sbjct: 117 LVAASIGPYGASLADGSEYRGHY--GLTEDELISFHRPRMKALIESGADLLACETIPCLS 174
Query: 435 EALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
EA A+ +LL EFPG AW+SFS KD H S G IS + LL + QI AIG+NC
Sbjct: 175 EAKAITRLLEEFPGTYAWISFSAKDGRHISEGTPISEC--AALLDSCSQIAAIGINCTPI 232
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554
H+ L+ IK+S + I YPN G +D V W E W E GV++I
Sbjct: 233 EHIPPLIEEIKRS-ASKPIIAYPNSGEQYDPVTKTWKGAACENHFGKSAQGWYENGVSLI 291
Query: 555 GGCCEVTSYEIQQM 568
GGCC +IQ +
Sbjct: 292 GGCCRTKPADIQAI 305
>gi|321461515|gb|EFX72546.1| hypothetical protein DAPPUDRAFT_308201 [Daphnia pulex]
Length = 325
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/266 (39%), Positives = 156/266 (58%), Gaps = 15/266 (5%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE-----ACVETHRDFIRAGADIIQ 60
K+ +LDG + + R V G PLWS L ++ + ++ H D++ AGADII+
Sbjct: 4 KLLILDGGLGTLLYRRG-AFVKGDPLWSVRCLVSKEQLEGRRQLLQAHLDYLAAGADIIK 62
Query: 61 SSCYQANVDNLTKL--GYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHI 118
++ YQ + +NL K G S+++AL+++ SV++ +A + Q+ I K+ G
Sbjct: 63 TNSYQMSTENLRKCLPGLSQEKALEMMKDSVRIARNACQQFWQS--IGEEKSGRRKPG-- 118
Query: 119 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 178
A SIGPYG D SEY+G YVDSMTE +LI WHRP + AL+ AGVDYLA+ET PA
Sbjct: 119 -VAGSIGPYGACKADMSEYTGAYVDSMTEEELIQWHRPRLVALLEAGVDYLAIETFPALL 177
Query: 179 EALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 237
EA A+++LL+ E P AW+SFSCKD+ H HGE + S + + ++AIG+NC
Sbjct: 178 EAKAILQLLKQEAPDIPAWISFSCKDEQHLCHGETLDSVLKHVWVNKTPGLKAIGINCTP 237
Query: 238 PSHVSTLVRCIKQSHPTVQTIVYPNK 263
+ L+R + V I+YPN+
Sbjct: 238 ERLIGPLLRSLDGVD-HVPVILYPNR 262
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 155/310 (50%), Gaps = 25/310 (8%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG + + R V G PLWS L ++ + +E R ++ H++ A+ +
Sbjct: 7 ILDGGLGTLLYRRG-AFVKGDPLWSVRCLVSKEQ--LEGRRQLLQAHLDYLAA---GADI 60
Query: 327 LRDGS-----EYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ----TA 377
++ S E + +++ + + +V A + I S + A
Sbjct: 61 IKTNSYQMSTENLRKCLPGLSQEKALEMMKDSVRIARNACQQFWQSIGEEKSGRRKPGVA 120
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
SIGPYG D SEY+G YVDSMTE +LI WHRP + AL+ AGVDYLA+ET PA EA
Sbjct: 121 GSIGPYGACKADMSEYTGAYVDSMTEEELIQWHRPRLVALLEAGVDYLAIETFPALLEAK 180
Query: 438 ALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
A+++LL+ E P AW+SFSCKD+ H HGE + S + + ++AIG+NC
Sbjct: 181 AILQLLKQEAPDIPAWISFSCKDEQHLCHGETLDSVLKHVWVNKTPGLKAIGINCTPERL 240
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWD------SVHMKWLDTEDEYSILHYVPQWLEEG 550
+ L+R + V I+YPN+ ++ + + D + ++ +WL
Sbjct: 241 IGPLLRSLDGVD-HVPVILYPNREESFEDEGPPVAAYPSRQDEKCNNNLSKLAKEWLSIH 299
Query: 551 VNI--IGGCC 558
N+ +GGCC
Sbjct: 300 PNVFALGGCC 309
>gi|407979478|ref|ZP_11160292.1| homocysteine methyltransferase [Bacillus sp. HYC-10]
gi|407413864|gb|EKF35541.1| homocysteine methyltransferase [Bacillus sp. HYC-10]
Length = 312
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/261 (39%), Positives = 151/261 (57%), Gaps = 22/261 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R D LWS+ L +PE + H D+ +AGAD ++ YQ +
Sbjct: 15 ILDGALATELERKGCDLNDS--LWSAKILIEQPELIQQVHLDYFQAGADCATTASYQTTI 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGP 126
D + GY+++EA+ L+ +SV L A + +++T K F A S+GP
Sbjct: 73 DGFAEKGYTKEEAIALMKRSVTLAKEACELFWQDETRREGRTKPF--------VAGSVGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
+G L DGSEY G+Y ++E LI +HRP ++ALV AG D LA ETIP EA A+ KL
Sbjct: 125 FGAYLSDGSEYKGNY--RLSEQALIDFHRPRIQALVEAGADILACETIPCLIEATAIAKL 182
Query: 187 LR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
L+ EF G AW++FS KDD H S G+L+ V + L +QI A+GVNC P +S+L+
Sbjct: 183 LQDEFSGVYAWITFSAKDDLHISEGDLLKDCVQA--LEPYEQIAAVGVNCTPPQFISSLI 240
Query: 246 RCIKQ--SHPTVQTIVYPNKG 264
+ +K+ S P V VYPN G
Sbjct: 241 QEMKKGTSKPIV---VYPNSG 258
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 161/306 (52%), Gaps = 24/306 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ R D LWS+ L +PE + H D+ + + A+ Y T
Sbjct: 15 ILDGALATELERKGCDLNDS--LWSAKILIEQPELIQQVHLDYFQAGAD-CATTASYQTT 71
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT----AASIGP 382
+ DG G+ T+ + IA + +V L + + + +T A S+GP
Sbjct: 72 I-DGFAEKGY-----TKEEAIALMKRSV-TLAKEACELFWQDETRREGRTKPFVAGSVGP 124
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
+G L DGSEY G+Y ++E LI +HRP ++ALV AG D LA ETIP EA A+ KL
Sbjct: 125 FGAYLSDGSEYKGNY--RLSEQALIDFHRPRIQALVEAGADILACETIPCLIEATAIAKL 182
Query: 443 LR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
L+ EF G AW++FS KDD H S G+L+ V + L +QI A+GVNC P +S+L+
Sbjct: 183 LQDEFSGVYAWITFSAKDDLHISEGDLLKDCVQA--LEPYEQIAAVGVNCTPPQFISSLI 240
Query: 502 RCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
+ +K+ S P V VYPN G ++D W + QW ++G IIGGCC
Sbjct: 241 QEMKKGTSKPIV---VYPNSGELYDPKEKVWSGDTSHRTFGECAHQWYKDGAQIIGGCCR 297
Query: 560 VTSYEI 565
T +I
Sbjct: 298 TTPEDI 303
>gi|452854286|ref|YP_007495969.1| homocysteine methylase using (R,S)AdoMet [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|452078546|emb|CCP20296.1| homocysteine methylase using (R,S)AdoMet [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 315
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/258 (39%), Positives = 146/258 (56%), Gaps = 13/258 (5%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V ++DG+ +++ R D LWS+ L PE + H ++ AGAD ++ YQ+
Sbjct: 13 VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAITASYQS 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
++ G E +A+ L+ SV+L A+D+ + L++ L+ AASIGP
Sbjct: 71 TIEGFAARGIPETDAIRLIQTSVELAAQARDEFWAHEENRLHRPKPLV------AASIGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY GHY +TE +LI++HRP ++AL+ +G D LA ETIP EA A+ +L
Sbjct: 125 YGASLADGSEYRGHY--GLTEDELISFHRPRMKALIESGADLLACETIPCLSEAKAITRL 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L EFPG AW+SFS KD H S G IS + LL + QI AIG+NC H+ L+
Sbjct: 183 LGEFPGTYAWISFSAKDGRHISEGTPISEC--AALLDSCSQIAAIGINCTTIEHIPPLIE 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
IK+S + I YPN G
Sbjct: 241 EIKRS-ASKPIIAYPNSG 257
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/314 (36%), Positives = 158/314 (50%), Gaps = 24/314 (7%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
YP V ++DG+ +++ R D LWS+ L PE + H ++ + A +
Sbjct: 11 YP---VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAIT 65
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA-----LIKPSISS 374
T+ G + E D I + +VE +A ++ A L +P
Sbjct: 66 ASYQSTI-------EGFAARGIPETDAIRLIQTSVELAAQARDEFWAHEENRLHRPK--P 116
Query: 375 QTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 434
AASIGPYG L DGSEY GHY +TE +LI++HRP ++AL+ +G D LA ETIP
Sbjct: 117 LVAASIGPYGASLADGSEYRGHY--GLTEDELISFHRPRMKALIESGADLLACETIPCLS 174
Query: 435 EALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
EA A+ +LL EFPG AW+SFS KD H S G IS + LL + QI AIG+NC
Sbjct: 175 EAKAITRLLGEFPGTYAWISFSAKDGRHISEGTPISEC--AALLDSCSQIAAIGINCTTI 232
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554
H+ L+ IK+S + I YPN G +D V W E W E GV++I
Sbjct: 233 EHIPPLIEEIKRS-ASKPIIAYPNSGEQYDPVTKTWKGAACENHFGKSAQSWYENGVSLI 291
Query: 555 GGCCEVTSYEIQQM 568
GGCC +IQ +
Sbjct: 292 GGCCRTKPADIQAI 305
>gi|15896591|ref|NP_349940.1| homocysteine methyltransferase [Clostridium acetobutylicum ATCC
824]
gi|337738552|ref|YP_004637999.1| homocysteine methyltransferase [Clostridium acetobutylicum DSM
1731]
gi|384460063|ref|YP_005672483.1| homocysteine methyltransferase [Clostridium acetobutylicum EA 2018]
gi|15026431|gb|AAK81280.1|AE007832_1 Possible homocysteine S-methyltransferase [Clostridium
acetobutylicum ATCC 824]
gi|325510752|gb|ADZ22388.1| homocysteine methyltransferase [Clostridium acetobutylicum EA 2018]
gi|336292910|gb|AEI34044.1| homocysteine methyltransferase [Clostridium acetobutylicum DSM
1731]
Length = 314
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 140/258 (54%), Gaps = 13/258 (5%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG+ +++ + D LWS+ L PE H D+ +G+D +S YQA
Sbjct: 14 VVILDGALATELEKRGCNLNDS--LWSAKILANNPEIIENVHYDYFVSGSDCAITSSYQA 71
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+D K G+ +A DL+ SV + A+D+ P N+ + G S+GP
Sbjct: 72 TIDGFMKNGFPRDKAKDLIRNSVAIAKKARDRFWGNPTNRRNRAKPFIAG------SVGP 125
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y + E LI +H+ NV+ L+ AG D LA ETIP EA A+VKL
Sbjct: 126 YGAYLADGSEYRGDY--KIDENALIKFHKSNVKLLIEAGADILACETIPNLTEARAIVKL 183
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L EFPG AW+SFSCK+D S G I +L + I AIGVNC P ++++L++
Sbjct: 184 LEEFPGVYAWISFSCKNDYEISDGTPIFECAK--VLNSCKNIAAIGVNCTSPKYINSLIK 241
Query: 247 CIKQSHPTVQTIVYPNKG 264
IK++ IVYPN G
Sbjct: 242 EIKKASDK-PIIVYPNSG 258
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/310 (35%), Positives = 150/310 (48%), Gaps = 27/310 (8%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V +LDG+ +++ + D LWS+ L PE H D+ + A +
Sbjct: 14 VVILDGALATELEKRGCNLNDS--LWSAKILANNPEIIENVHYDYFVSGSDCAITSSYQA 71
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL--------ALIKPSISSQT 376
T+ DG +G D DLI N A+ + D KP I
Sbjct: 72 TI--DGFMKNGFPRDKAK--DLIR----NSVAIAKKARDRFWGNPTNRRNRAKPFI---- 119
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S+GPYG L DGSEY G Y + E LI +H+ NV+ L+ AG D LA ETIP EA
Sbjct: 120 AGSVGPYGAYLADGSEYRGDY--KIDENALIKFHKSNVKLLIEAGADILACETIPNLTEA 177
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
A+VKLL EFPG AW+SFSCK+D S G I +L + I AIGVNC P +
Sbjct: 178 RAIVKLLEEFPGVYAWISFSCKNDYEISDGTPIFECAK--VLNSCKNIAAIGVNCTSPKY 235
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556
+++L++ IK++ IVYPN G +D+ W + +W E G ++IGG
Sbjct: 236 INSLIKEIKKASDK-PIIVYPNSGEEYDANTKTWHGASSSNAFSISAKEWFENGASVIGG 294
Query: 557 CCEVTSYEIQ 566
CC T +I
Sbjct: 295 CCRTTPSDIN 304
>gi|224825185|ref|ZP_03698291.1| homocysteine S-methyltransferase [Pseudogulbenkiania ferrooxidans
2002]
gi|224602856|gb|EEG09033.1| homocysteine S-methyltransferase [Pseudogulbenkiania ferrooxidans
2002]
Length = 321
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/259 (38%), Positives = 140/259 (54%), Gaps = 14/259 (5%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG+ +++ + D PLWS+ L EPE + H D+ AGAD+ ++ YQA
Sbjct: 18 VLILDGALATELQQRGCDLND--PLWSARVLIEEPELIRQVHEDYFAAGADVATTASYQA 75
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + GY + A L+ ++V L A+D P + L+ AAS+GP
Sbjct: 76 TFEGFARRGYDAEAAAALMRRAVTLAVEARDAFWSDPAHRQGRPKPLV------AASVGP 129
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L DGSEY G Y + E L+ +HRP ++ L+ AG D LA ETIP + EA AL +L
Sbjct: 130 YGAMLADGSEYRGDY--GLGEQQLMDFHRPRLKVLLEAGADLLACETIPCQVEARALARL 187
Query: 187 L-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
L EFP +AW+SFSCKD HT GE ++ AV L +Q A+GVNC P + LV
Sbjct: 188 LAEEFPSARAWISFSCKDGEHTCQGEKLADAVAE--LNEVEQAVAVGVNCTAPEFIPALV 245
Query: 246 RCIKQSHPTVQTIVYPNKG 264
T +VYPN G
Sbjct: 246 -AAAHGATTKPLLVYPNSG 263
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 152/313 (48%), Gaps = 21/313 (6%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
YP V +LDG+ +++ + D PLWS+ L EPE + H D+ + A +
Sbjct: 16 YP---VLILDGALATELQQRGCDLND--PLWSARVLIEEPELIRQVHEDYFAAGADVATT 70
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL---ALIKPSISSQT 376
T +G G+ D+ A L+ R V V A + A +
Sbjct: 71 ASYQATF--EGFARRGY--DAEAAAALM---RRAVTLAVEARDAFWSDPAHRQGRPKPLV 123
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
AAS+GPYG +L DGSEY G Y + E L+ +HRP ++ L+ AG D LA ETIP + EA
Sbjct: 124 AASVGPYGAMLADGSEYRGDY--GLGEQQLMDFHRPRLKVLLEAGADLLACETIPCQVEA 181
Query: 437 LALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
AL +LL EFP +AW+SFSCKD HT GE ++ AV L +Q A+GVNC P
Sbjct: 182 RALARLLAEEFPSARAWISFSCKDGEHTCQGEKLADAVAE--LNEVEQAVAVGVNCTAPE 239
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
+ LV T +VYPN G +D H W D W + G +IG
Sbjct: 240 FIPALV-AAAHGATTKPLLVYPNSGEHYDPEHKCWHGHADANRFAEAARGWHQAGARLIG 298
Query: 556 GCCEVTSYEIQQM 568
GCC T +I+ +
Sbjct: 299 GCCRTTPQDIRAV 311
>gi|385263366|ref|ZP_10041453.1| homocysteine methyltransferase [Bacillus sp. 5B6]
gi|385147862|gb|EIF11799.1| homocysteine methyltransferase [Bacillus sp. 5B6]
Length = 315
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/314 (36%), Positives = 159/314 (50%), Gaps = 24/314 (7%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
YP V ++DG+ +++ R D LWS+ L PE + H ++ + A +
Sbjct: 11 YP---VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAIT 65
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA-----LIKPSISS 374
T+ G + E D I + +VE +A ++ A L +P
Sbjct: 66 ASYQSTI-------EGFAARGILETDAIRLIQTSVELAAQARDEFWAHEENRLHRPK--P 116
Query: 375 QTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 434
AASIGPYG L DGSEY GHY +TE +LI++HRP ++AL+ +G D LA ETIP
Sbjct: 117 LVAASIGPYGASLADGSEYRGHY--GLTEDELISFHRPRMKALIESGADLLACETIPCLS 174
Query: 435 EALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
EA A+ +LL EFPG AW+SFS KD H S G IS + LL + QI AIG+NC
Sbjct: 175 EAKAITRLLEEFPGTYAWISFSAKDGRHISEGTPISEC--AALLDSCSQIAAIGINCTPI 232
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554
H+ LV+ IK++ + I YPN G +D V W E W E GV++I
Sbjct: 233 EHIPQLVQEIKRA-TSKPIIAYPNSGEQYDPVTKTWKGAACENHFGKSAQSWYENGVSLI 291
Query: 555 GGCCEVTSYEIQQM 568
GGCC +IQ +
Sbjct: 292 GGCCRTKPADIQAI 305
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/258 (39%), Positives = 147/258 (56%), Gaps = 13/258 (5%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V ++DG+ +++ R D LWS+ L PE + H ++ AGAD ++ YQ+
Sbjct: 13 VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAITASYQS 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
++ G E +A+ L+ SV+L A+D+ + L++ L+ AASIGP
Sbjct: 71 TIEGFAARGILETDAIRLIQTSVELAAQARDEFWAHEENRLHRPKPLV------AASIGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY GHY +TE +LI++HRP ++AL+ +G D LA ETIP EA A+ +L
Sbjct: 125 YGASLADGSEYRGHY--GLTEDELISFHRPRMKALIESGADLLACETIPCLSEAKAITRL 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L EFPG AW+SFS KD H S G IS + LL + QI AIG+NC H+ LV+
Sbjct: 183 LEEFPGTYAWISFSAKDGRHISEGTPISEC--AALLDSCSQIAAIGINCTPIEHIPQLVQ 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
IK++ + I YPN G
Sbjct: 241 EIKRA-TSKPIIAYPNSG 257
>gi|394992981|ref|ZP_10385747.1| homocysteine methyltransferase [Bacillus sp. 916]
gi|393806187|gb|EJD67540.1| homocysteine methyltransferase [Bacillus sp. 916]
Length = 315
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 102/258 (39%), Positives = 146/258 (56%), Gaps = 13/258 (5%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V ++DG+ +++ R D LWS+ L PE + H ++ AGAD ++ YQ+
Sbjct: 13 VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAITASYQS 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
++ G E +A+ L+ SV+L A+D+ + L++ L+ AASIGP
Sbjct: 71 TIEGFAARGIPETDAIRLIQTSVELAAQARDEFWAHEENRLHRPKPLI------AASIGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY GHY +TE +LI++HRP ++AL+ +G D LA ETIP EA A+ +L
Sbjct: 125 YGASLADGSEYRGHY--GLTEDELISFHRPRMKALIESGADLLACETIPCLSEAKAITRL 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L EFPG AW+SFS KD H S G IS + LL + QI AIG+NC H+ L+
Sbjct: 183 LEEFPGTYAWISFSAKDGRHISEGTPISE--CAALLDSCSQIAAIGINCTPIEHIPPLIE 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
IK++ + I YPN G
Sbjct: 241 EIKRA-ASKPIIAYPNSG 257
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/314 (36%), Positives = 158/314 (50%), Gaps = 24/314 (7%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
YP V ++DG+ +++ R D LWS+ L PE + H ++ + A +
Sbjct: 11 YP---VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAIT 65
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA-----LIKPSISS 374
T+ G + E D I + +VE +A ++ A L +P
Sbjct: 66 ASYQSTI-------EGFAARGIPETDAIRLIQTSVELAAQARDEFWAHEENRLHRPK--P 116
Query: 375 QTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 434
AASIGPYG L DGSEY GHY +TE +LI++HRP ++AL+ +G D LA ETIP
Sbjct: 117 LIAASIGPYGASLADGSEYRGHY--GLTEDELISFHRPRMKALIESGADLLACETIPCLS 174
Query: 435 EALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
EA A+ +LL EFPG AW+SFS KD H S G IS + LL + QI AIG+NC
Sbjct: 175 EAKAITRLLEEFPGTYAWISFSAKDGRHISEGTPISE--CAALLDSCSQIAAIGINCTPI 232
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554
H+ L+ IK++ + I YPN G +D V W E W E GV++I
Sbjct: 233 EHIPPLIEEIKRA-ASKPIIAYPNSGEQYDPVTKTWKGAACENHFGKSAQSWYENGVSLI 291
Query: 555 GGCCEVTSYEIQQM 568
GGCC +IQ +
Sbjct: 292 GGCCRTKPADIQAI 305
>gi|195437795|ref|XP_002066825.1| GK24683 [Drosophila willistoni]
gi|194162910|gb|EDW77811.1| GK24683 [Drosophila willistoni]
Length = 350
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 178/333 (53%), Gaps = 27/333 (8%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
++ ++G+ + G F SQ+SR+ + VDGHPLWSS + + PEA ++TH DF+ + A
Sbjct: 23 IWESRGILVKCGGFASQLSRNLGQKVDGHPLWSSRFDASNPEAVIQTHLDFLH----SGA 78
Query: 319 SIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYLALIK-----PSI 372
I T + H V +LIA +V+ ++A YL ++ P
Sbjct: 79 DIILTNTYQSSVEGFMKHLQVTREQSIELIA---QSVKLALQAKDTYLKDLEEAEDTPCK 135
Query: 373 SSQ----TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE 428
+S+ ASIGPYG L DGSEY+G Y D + L WH+ ++ + GVD LA+E
Sbjct: 136 NSRRDPIVLASIGPYGAHLHDGSEYTGDYSDQVQTELLQKWHKVRIDTCLLNGVDGLAVE 195
Query: 429 TIPAEKEALALVKL-LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ-- 485
T+P EA A+ +L L + K W+SF C+D+T ++GE + A + D Q
Sbjct: 196 TMPCLLEAKAVTELILTSYSNVKFWVSFQCRDETSLANGESFAHAAHTIWRMVQDAGQES 255
Query: 486 ---AIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL 540
AIGVNCV P+ VS+L + + + IVY N+G ++DS +W+ + +++
Sbjct: 256 RLLAIGVNCVNPNFVSSLFKSLNSLAGPDRIPLIVYSNRGEIYDSASGEWIGSGQ--NVV 313
Query: 541 HYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMID 573
+VP+W++ G I+GGCC V +I ++R D
Sbjct: 314 EFVPEWIKLGARIVGGCCRVYPADIARIRQCAD 346
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/269 (38%), Positives = 153/269 (56%), Gaps = 23/269 (8%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL 71
G F SQ+SR+ + VDGHPLWSS + + PEA ++TH DF+ +GADII ++ YQ++V+
Sbjct: 34 GGFASQLSRNLGQKVDGHPLWSSRFDASNPEAVIQTHLDFLHSGADIILTNTYQSSVEGF 93
Query: 72 TK-LGYSEQEALDLLHKSVQLMNSAKD-------KENQTPDINLNKTFNLLTGHIETAAS 123
K L + +++++L+ +SV+L AKD + TP N + +L AS
Sbjct: 94 MKHLQVTREQSIELIAQSVKLALQAKDTYLKDLEEAEDTPCKNSRRDPIVL-------AS 146
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
IGPYG L DGSEY+G Y D + L WH+ ++ + GVD LA+ET+P EA A+
Sbjct: 147 IGPYGAHLHDGSEYTGDYSDQVQTELLQKWHKVRIDTCLLNGVDGLAVETMPCLLEAKAV 206
Query: 184 VKL-LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ-----AIGVNCVR 237
+L L + K W+SF C+D+T ++GE + A + D Q AIGVNCV
Sbjct: 207 TELILTSYSNVKFWVSFQCRDETSLANGESFAHAAHTIWRMVQDAGQESRLLAIGVNCVN 266
Query: 238 PSHVSTLVRCIKQ--SHPTVQTIVYPNKG 264
P+ VS+L + + + IVY N+G
Sbjct: 267 PNFVSSLFKSLNSLAGPDRIPLIVYSNRG 295
>gi|154684747|ref|YP_001419908.1| homocysteine methyltransferase [Bacillus amyloliquefaciens FZB42]
gi|154350598|gb|ABS72677.1| YbgG [Bacillus amyloliquefaciens FZB42]
Length = 315
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 114/314 (36%), Positives = 159/314 (50%), Gaps = 24/314 (7%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
YP V ++DG+ +++ R D LWS+ L PE + H ++ + A +
Sbjct: 11 YP---VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAIT 65
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA-----LIKPSISS 374
T+ G + E D I + +VE +A ++ A L +P
Sbjct: 66 ASYQSTI-------EGFAARGIPETDAIRLIQTSVELAAQARDEFWAHEENRLHRPK--P 116
Query: 375 QTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 434
AASIGPYG L DGSEY GHY +TE +LI++HRP ++AL+ +G D LA ETIP
Sbjct: 117 LVAASIGPYGASLADGSEYRGHY--GLTEDELISFHRPRMKALIESGADLLACETIPCLS 174
Query: 435 EALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
EA A+ +LL EFPG AW+SFS KD H S G IS + LL + QI AIG+NC
Sbjct: 175 EAKAITRLLEEFPGTYAWISFSAKDGRHISEGTPISEC--AALLDSCSQIAAIGINCTPI 232
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554
H+ L+ IK++ + I YPN G +D V W E + W E GV++I
Sbjct: 233 EHIPPLIEEIKRAA-SKPIIAYPNSGEQYDPVTKTWKGAACENNFGKSAQGWYENGVSLI 291
Query: 555 GGCCEVTSYEIQQM 568
GGCC +IQ +
Sbjct: 292 GGCCRTKPADIQAI 305
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/258 (39%), Positives = 146/258 (56%), Gaps = 13/258 (5%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V ++DG+ +++ R D LWS+ L PE + H ++ AGAD ++ YQ+
Sbjct: 13 VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAITASYQS 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
++ G E +A+ L+ SV+L A+D+ + L++ L+ AASIGP
Sbjct: 71 TIEGFAARGIPETDAIRLIQTSVELAAQARDEFWAHEENRLHRPKPLV------AASIGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY GHY +TE +LI++HRP ++AL+ +G D LA ETIP EA A+ +L
Sbjct: 125 YGASLADGSEYRGHY--GLTEDELISFHRPRMKALIESGADLLACETIPCLSEAKAITRL 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L EFPG AW+SFS KD H S G IS + LL + QI AIG+NC H+ L+
Sbjct: 183 LEEFPGTYAWISFSAKDGRHISEGTPISEC--AALLDSCSQIAAIGINCTPIEHIPPLIE 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
IK++ + I YPN G
Sbjct: 241 EIKRAA-SKPIIAYPNSG 257
>gi|375360910|ref|YP_005128949.1| homocysteine methyltransferase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|451348385|ref|YP_007447016.1| homocysteine methyltransferase [Bacillus amyloliquefaciens IT-45]
gi|371566904|emb|CCF03754.1| homocysteine methyltransferase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|449852143|gb|AGF29135.1| homocysteine methyltransferase [Bacillus amyloliquefaciens IT-45]
Length = 315
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/258 (39%), Positives = 147/258 (56%), Gaps = 13/258 (5%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V ++DG+ +++ R D LWS+ L PE + H ++ AGAD ++ YQ+
Sbjct: 13 VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAITASYQS 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
++ G E EA+ L+ SV+L A+D+ + L++ L+ AASIGP
Sbjct: 71 TIEGFAAHGIPETEAIRLIQTSVELAAQARDEFWAHEENRLHRPKPLV------AASIGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY GHY +TE +LI++HRP ++AL+ +G D LA ETIP+ EA A+ +L
Sbjct: 125 YGASLADGSEYRGHY--GLTEDELISFHRPRMKALIESGADLLACETIPSLSEAKAITRL 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L EFPG AW+SFS KD H S G IS + LL + QI AIG+NC ++ L+
Sbjct: 183 LEEFPGTYAWISFSAKDGRHISEGTPISEC--AALLDSCSQIAAIGINCTPIEYIPPLIE 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
IK++ + I YPN G
Sbjct: 241 EIKRA-ASKPIIAYPNSG 257
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 159/314 (50%), Gaps = 24/314 (7%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
YP V ++DG+ +++ R D LWS+ L PE + H ++ + A +
Sbjct: 11 YP---VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAIT 65
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA-----LIKPSISS 374
T+ G + E + I + +VE +A ++ A L +P
Sbjct: 66 ASYQSTI-------EGFAAHGIPETEAIRLIQTSVELAAQARDEFWAHEENRLHRPK--P 116
Query: 375 QTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 434
AASIGPYG L DGSEY GHY +TE +LI++HRP ++AL+ +G D LA ETIP+
Sbjct: 117 LVAASIGPYGASLADGSEYRGHY--GLTEDELISFHRPRMKALIESGADLLACETIPSLS 174
Query: 435 EALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
EA A+ +LL EFPG AW+SFS KD H S G IS + LL + QI AIG+NC
Sbjct: 175 EAKAITRLLEEFPGTYAWISFSAKDGRHISEGTPISEC--AALLDSCSQIAAIGINCTPI 232
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554
++ L+ IK++ + I YPN G +D V W E W E GV++I
Sbjct: 233 EYIPPLIEEIKRA-ASKPIIAYPNSGEQYDPVTKTWKGAACENHFGKSAQSWYENGVSLI 291
Query: 555 GGCCEVTSYEIQQM 568
GGCC +IQ +
Sbjct: 292 GGCCRTKPADIQAI 305
>gi|384263855|ref|YP_005419562.1| homocysteine methyltransferase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387896748|ref|YP_006327044.1| homocysteine S-methyltransferase [Bacillus amyloliquefaciens Y2]
gi|380497208|emb|CCG48246.1| homocysteine methyltransferase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387170858|gb|AFJ60319.1| homocysteine S-methyltransferase [Bacillus amyloliquefaciens Y2]
Length = 315
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/316 (36%), Positives = 158/316 (50%), Gaps = 28/316 (8%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
YP V ++DG+ +++ R D LWS+ L PE + H ++ + A +
Sbjct: 11 YP---VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAIT 65
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA-------LIKPSI 372
T+ G + E D I + +VE +A ++ A KP +
Sbjct: 66 ASYQSTI-------EGFAARGIPETDAIRLIQTSVELAAQARDEFWAHEENRSHRPKPLV 118
Query: 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA 432
AASIGPYG L DGSEY GHY +TE +LI++HRP ++AL+ +G D LA ETIP
Sbjct: 119 ----AASIGPYGASLADGSEYRGHY--GLTEDELISFHRPRMKALIESGADLLACETIPC 172
Query: 433 EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 492
EA A+ +LL EFPG AW+SFS KD H S G IS + LL + QI AIG+NC
Sbjct: 173 LSEAKAITRLLEEFPGTYAWISFSAKDGRHISEGTPISEC--AALLDSCSQIAAIGINCT 230
Query: 493 RPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552
H+ L+ IK+S + I YPN G +D V W E W E GV+
Sbjct: 231 PIEHIPPLIEEIKRS-ASKPIIAYPNSGEQYDPVTKTWKGAACENHFGKSAQSWYENGVS 289
Query: 553 IIGGCCEVTSYEIQQM 568
+IGGCC +IQ +
Sbjct: 290 LIGGCCRTKPADIQAI 305
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/258 (39%), Positives = 145/258 (56%), Gaps = 13/258 (5%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V ++DG+ +++ R D LWS+ L PE + H ++ AGAD ++ YQ+
Sbjct: 13 VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAITASYQS 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
++ G E +A+ L+ SV+L A+D+ + ++ L+ AASIGP
Sbjct: 71 TIEGFAARGIPETDAIRLIQTSVELAAQARDEFWAHEENRSHRPKPLV------AASIGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY GHY +TE +LI++HRP ++AL+ +G D LA ETIP EA A+ +L
Sbjct: 125 YGASLADGSEYRGHY--GLTEDELISFHRPRMKALIESGADLLACETIPCLSEAKAITRL 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L EFPG AW+SFS KD H S G IS + LL + QI AIG+NC H+ L+
Sbjct: 183 LEEFPGTYAWISFSAKDGRHISEGTPISEC--AALLDSCSQIAAIGINCTPIEHIPPLIE 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
IK+S + I YPN G
Sbjct: 241 EIKRS-ASKPIIAYPNSG 257
>gi|153954877|ref|YP_001395642.1| homocysteine methyltransferase [Clostridium kluyveri DSM 555]
gi|219855331|ref|YP_002472453.1| hypothetical protein CKR_1988 [Clostridium kluyveri NBRC 12016]
gi|146347735|gb|EDK34271.1| Predicted homocysteine S-methyltransferase [Clostridium kluyveri
DSM 555]
gi|219569055|dbj|BAH07039.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 313
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/259 (38%), Positives = 152/259 (58%), Gaps = 13/259 (5%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
KV +LDG+ +++ + D LWS+ L +P+ H D+ +GAD +S YQ
Sbjct: 12 KVIILDGALATELEKIGCNIDDS--LWSAKILYEDPKIIEGVHYDYFVSGADCAITSSYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
A + + G+ E EA++L+ SVQ+ A+D+ + P +N+ L+ G SIG
Sbjct: 70 ATIRGFMEKGFKEDEAIELIRLSVQVAKKARDRFWKNPLNRINRPKPLIAG------SIG 123
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY GHY +++E +L+ +HRP ++ L+ GVD LA ETIP+ EA A++K
Sbjct: 124 PYGAYLADGSEYIGHY--NISEEELMEFHRPRMKILIEEGVDILACETIPSLVEAQAILK 181
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
LL EFP +W+SFS KD+ + S G S A + L + Q+ AIGVNC P ++++L+
Sbjct: 182 LLEEFPSVCSWISFSAKDELNISEG--TSLAKCAKYLDSNRQVAAIGVNCTPPKYINSLI 239
Query: 246 RCIKQSHPTVQTIVYPNKG 264
I + + + IVYPN G
Sbjct: 240 EQISK-NSSKPIIVYPNSG 257
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 157/309 (50%), Gaps = 25/309 (8%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V +LDG+ +++ + D LWS+ L +P+ H D+ + A + Y
Sbjct: 13 VIILDGALATELEKIGCNIDDS--LWSAKILYEDPKIIEGVHYDYFVSGADCAIT-SSYQ 69
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-------VDYLALIKPSISSQTA 377
+R G E + I R +V+ +A ++ + KP I A
Sbjct: 70 ATIR------GFMEKGFKEDEAIELIRLSVQVAKKARDRFWKNPLNRINRPKPLI----A 119
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
SIGPYG L DGSEY GHY +++E +L+ +HRP ++ L+ GVD LA ETIP+ EA
Sbjct: 120 GSIGPYGAYLADGSEYIGHY--NISEEELMEFHRPRMKILIEEGVDILACETIPSLVEAQ 177
Query: 438 ALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
A++KLL EFP +W+SFS KD+ + S G S A + L + Q+ AIGVNC P ++
Sbjct: 178 AILKLLEEFPSVCSWISFSAKDELNISEG--TSLAKCAKYLDSNRQVAAIGVNCTPPKYI 235
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
++L+ I + + + IVYPN G +D + W + +W + G +IGGC
Sbjct: 236 NSLIEQISK-NSSKPIIVYPNSGEEYDGITKTWHGDSSSKAFSCSAKEWFDGGARLIGGC 294
Query: 558 CEVTSYEIQ 566
C T +I+
Sbjct: 295 CRTTPEDIK 303
>gi|296272992|ref|YP_003655623.1| homocysteine S-methyltransferase [Arcobacter nitrofigilis DSM 7299]
gi|296097166|gb|ADG93116.1| homocysteine S-methyltransferase [Arcobacter nitrofigilis DSM 7299]
Length = 310
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 158/278 (56%), Gaps = 15/278 (5%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K+ ++DG+ +++ R D LWS+ +L P+A E H+D++ AG+D I + YQ
Sbjct: 12 KIVIIDGATGTELERKGYDINDS--LWSAKFLMENPKAIYEVHKDYLEAGSDCITTLSYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
A + + G +E +A +LL S++L A+D E + + ++ L+ AAS+G
Sbjct: 70 ATFEGFKERGLNEVQAKELLQSSIKLAIEARD-EFWASNESKSRIKPLV------AASVG 122
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSE+ G+Y +++ +L+ +HR ++AL+ A D LA ET+P EA A VK
Sbjct: 123 PYGAYLADGSEFRGNY--GLSQEELVNFHRKRMQALIEAKPDLLACETVPCLIEAKAYVK 180
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
LL EFP +AW++FS KD H + GE I L N +Q+ AIG+NC P ++ +L+
Sbjct: 181 LLEEFPSTQAWITFSAKDGKHINSGESIKECAK--FLDNKEQVVAIGINCTAPQYIESLI 238
Query: 246 RCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKD 283
IK+ T IVYPN G DG+ + ++ KD
Sbjct: 239 SQIKEVS-TKPIIVYPNGGA-AYDGATKTWSTQANTKD 274
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 165/315 (52%), Gaps = 22/315 (6%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
+ ++ + ++DG+ +++ R D LWS+ +L P+A E H+D++ +
Sbjct: 7 ILKSQKIVIIDGATGTELERKGYDINDS--LWSAKFLMENPKAIYEVHKDYLEAGSDCI- 63
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL--IKPSISSQT 376
T L + + G + E + +++ + A ++ A K I
Sbjct: 64 ------TTLSYQATFEGFKERGLNEVQAKELLQSSIKLAIEARDEFWASNESKSRIKPLV 117
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
AAS+GPYG L DGSE+ G+Y +++ +L+ +HR ++AL+ A D LA ET+P EA
Sbjct: 118 AASVGPYGAYLADGSEFRGNY--GLSQEELVNFHRKRMQALIEAKPDLLACETVPCLIEA 175
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
A VKLL EFP +AW++FS KD H + GE I L N +Q+ AIG+NC P +
Sbjct: 176 KAYVKLLEEFPSTQAWITFSAKDGKHINSGESIKECAK--FLDNKEQVVAIGINCTAPQY 233
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW---LDTEDEYSILHYVPQWLEEGVNI 553
+ +L+ IK+ T IVYPN G +D W +T+D + H W E+G ++
Sbjct: 234 IESLISQIKEVS-TKPIIVYPNGGAAYDGATKTWSTQANTKDYGKMAHL---WYEKGASV 289
Query: 554 IGGCCEVTSYEIQQM 568
IGGCC+ T +I+Q+
Sbjct: 290 IGGCCQTTPNDIEQI 304
>gi|296332201|ref|ZP_06874664.1| homocysteine methyltransferase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305672941|ref|YP_003864612.1| homocysteine methyltransferase [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296150693|gb|EFG91579.1| homocysteine methyltransferase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305411184|gb|ADM36302.1| homocysteine methyltransferase [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 315
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 144/256 (56%), Gaps = 13/256 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R D LWS+ L EP+ + H D+ AGAD ++ YQ+
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILMEEPDLIKQIHTDYFAAGADCAITASYQSTF 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G SE +A L+ SV + A+D+ + LN+ ++ AAS+GPYG
Sbjct: 73 EGFAARGLSEAKARRLIEMSVSIAAVARDEFWALEENRLNRPKPII------AASVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY GHY +TE +L+ +HRP ++AL+ AG D LA ETIP EA A+V+LL+
Sbjct: 127 AYLADGSEYRGHY--GITEDELVEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLK 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP AW+SFS KD H S G +A + L QI AIG+NC H+ +L+ +
Sbjct: 185 EFPETYAWISFSAKDGLHISDG--TPAADCASWLDEHHQIAAIGINCTPLQHIPSLIEEL 242
Query: 249 KQSHPTVQTIVYPNKG 264
K+ H + IVYPN G
Sbjct: 243 KK-HTSKPIIVYPNSG 257
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 152/305 (49%), Gaps = 17/305 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ R D LWS+ L EP+ + H D+ + A + T
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILMEEPDLIKQIHTDYFAAGADCAITASYQST- 71
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT---AASIGPY 383
+ G ++EA +V A ++ AL + ++ AAS+GPY
Sbjct: 72 ------FEGFAARGLSEAKARRLIEMSVSIAAVARDEFWALEENRLNRPKPIIAASVGPY 125
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L DGSEY GHY +TE +L+ +HRP ++AL+ AG D LA ETIP EA A+V+LL
Sbjct: 126 GAYLADGSEYRGHY--GITEDELVEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLL 183
Query: 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
+EFP AW+SFS KD H S G +A + L QI AIG+NC H+ +L+
Sbjct: 184 KEFPETYAWISFSAKDGLHISDG--TPAADCASWLDEHHQIAAIGINCTPLQHIPSLIEE 241
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
+K+ H + IVYPN G +D W W E+G +IGGCC
Sbjct: 242 LKK-HTSKPIIVYPNSGEQYDPETKTWNGAACAEPYGQSARMWHEKGAKLIGGCCRTKPE 300
Query: 564 EIQQM 568
+I+++
Sbjct: 301 DIKEI 305
>gi|398307727|ref|ZP_10511313.1| homocysteine methyltransferase [Bacillus vallismortis DV1-F-3]
Length = 315
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 141/256 (55%), Gaps = 13/256 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R D LWS+ L EPE + H D+ AGAD ++ YQ+
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILMEEPELIKQVHTDYFAAGADCAITASYQSTF 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G SE EA L+ SV + A+D+ + LN+ ++ AAS+GPYG
Sbjct: 73 EGFAARGLSEAEARRLIEMSVSIAAEARDEFWAFEENRLNRPKPII------AASVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY GHY ++E +L+ +HRP ++AL+ AG D LA ETIP EA A+ +LL+
Sbjct: 127 AYLADGSEYRGHY--GISEDELVEFHRPRMKALIEAGADVLACETIPCLSEAKAIARLLK 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP AW+SFS KD H S G +A + L QI A G+NC H+ L+ +
Sbjct: 185 EFPEAYAWISFSAKDSQHISDG--TPAADCASWLDEHRQIAAFGINCTPLQHIPFLIEEL 242
Query: 249 KQSHPTVQTIVYPNKG 264
K+ H + IVYPN G
Sbjct: 243 KK-HSSKPIIVYPNSG 257
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 150/305 (49%), Gaps = 17/305 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ R D LWS+ L EPE + H D+ + A + T
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILMEEPELIKQVHTDYFAAGADCAITASYQST- 71
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT---AASIGPY 383
+ G ++EA+ +V A ++ A + ++ AAS+GPY
Sbjct: 72 ------FEGFAARGLSEAEARRLIEMSVSIAAEARDEFWAFEENRLNRPKPIIAASVGPY 125
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L DGSEY GHY ++E +L+ +HRP ++AL+ AG D LA ETIP EA A+ +LL
Sbjct: 126 GAYLADGSEYRGHY--GISEDELVEFHRPRMKALIEAGADVLACETIPCLSEAKAIARLL 183
Query: 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
+EFP AW+SFS KD H S G +A + L QI A G+NC H+ L+
Sbjct: 184 KEFPEAYAWISFSAKDSQHISDG--TPAADCASWLDEHRQIAAFGINCTPLQHIPFLIEE 241
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
+K+ H + IVYPN G +D W W E+G +IGGCC T
Sbjct: 242 LKK-HSSKPIIVYPNSGEQYDPKTKTWNGAGCAEPYGTSARTWHEKGAKLIGGCCRTTPE 300
Query: 564 EIQQM 568
+I+++
Sbjct: 301 DIKEI 305
>gi|325978443|ref|YP_004288159.1| homocysteine methyltransferase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325178371|emb|CBZ48415.1| homocysteine methyltransferase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 316
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 151/266 (56%), Gaps = 16/266 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + DV G LWS+ YL P + H ++R+GADI+ +S YQA V
Sbjct: 15 ILDGALGTELEKRGY-DVSGK-LWSAKYLLENPSVIQDLHDVYLRSGADILTTSSYQATV 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGP 126
L G SE+EALD++ +V L A+D + + + + L++G +GP
Sbjct: 73 QGLKDFGLSEKEALDIISLTVTLARQARDNFWNGLSDEAKKKRPYPLISG------DVGP 126
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
Y L DGSEY+G+Y +T+ + A+HRP ++AL+ AG D+L +ETIP EA AL+ L
Sbjct: 127 YAAYLADGSEYNGNY--QLTQEEYQAFHRPRIQALLSAGSDFLGIETIPNVAEAKALLDL 184
Query: 187 L-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
L EFP +A++SF+ +DD H S G I C QI A G+NC P+ +S L+
Sbjct: 185 LATEFPQTEAYISFTAQDDKHISDGTPIEEVAALC--EQSPQILAFGINCSSPAVISGLL 242
Query: 246 RCIKQSHPTVQTIVYPNKGVKLLDGS 271
+ I+ P + YPN G ++ DG+
Sbjct: 243 KRIRTVSPKKPLVTYPNSG-EIYDGA 267
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 154/310 (49%), Gaps = 28/310 (9%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ + DV G LWS+ YL P + H ++R + + TV
Sbjct: 15 ILDGALGTELEKRGY-DVSGK-LWSAKYLLENPSVIQDLHDVYLRSGADILTTSSYQATV 72
Query: 327 --LRDG--SEYSGHYVDSMT-----EADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA 377
L+D SE + S+T +A W+ + EA + P IS
Sbjct: 73 QGLKDFGLSEKEALDIISLTVTLARQARDNFWNGLSDEAKKKRPY-------PLIS---- 121
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
+GPY L DGSEY+G+Y +T+ + A+HRP ++AL+ AG D+L +ETIP EA
Sbjct: 122 GDVGPYAAYLADGSEYNGNY--QLTQEEYQAFHRPRIQALLSAGSDFLGIETIPNVAEAK 179
Query: 438 ALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
AL+ LL EFP +A++SF+ +DD H S G I C QI A G+NC P+
Sbjct: 180 ALLDLLATEFPQTEAYISFTAQDDKHISDGTPIEEVAALC--EQSPQILAFGINCSSPAV 237
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDE-YSILHYVPQWLEEGVNIIG 555
+S L++ I+ P + YPN G ++D W D +++L W + G I+G
Sbjct: 238 ISGLLKRIRTVSPKKPLVTYPNSGEIYDGATQTWKSIPDNSHTLLENSRAWHQLGAKIVG 297
Query: 556 GCCEVTSYEI 565
GCC + +I
Sbjct: 298 GCCRTSPEDI 307
>gi|419926004|ref|ZP_14443818.1| homocysteine methyltransferase [Escherichia coli 541-15]
gi|432527781|ref|ZP_19764863.1| homocysteine S-methyltransferase [Escherichia coli KTE233]
gi|388384604|gb|EIL46323.1| homocysteine methyltransferase [Escherichia coli 541-15]
gi|431061547|gb|ELD70848.1| homocysteine S-methyltransferase [Escherichia coli KTE233]
Length = 310
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 162/322 (50%), Gaps = 17/322 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + + +LDG+ +++ D LWS+ L PE E H
Sbjct: 1 MSQNNPL--TAILEKQPFVVLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + EA A +VE +A YLA
Sbjct: 57 DYYRAGAQVAITASYQATP-------AGFAARGLDEAQSRALIGKSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G YV S E A+HRP VEAL+ AG D LA
Sbjct: 110 NPHAGTLLVAGSVGPYGAYLADGSEYRGDYVRSAGE--FTAFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P+ E AL LL E+P +AW SF+ +D H S G + V++ LAN QI A+
Sbjct: 168 ETLPSFTEIKALAALLAEYPRARAWFSFTLRDSEHLSDGTPLREVVSA--LANSPQIVAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILH-YVPQW 546
G+NC+ + + ++ + QS ++ +VYPN G +D+V W L Y+PQW
Sbjct: 226 GINCIALENTTAALKHL-QSLTSLPLVVYPNSGEHYDAVTKTWHHHGGACETLAGYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
LE G +IGGCC T +I ++
Sbjct: 285 LEAGAKLIGGCCRTTPKDIAEL 306
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 135/256 (52%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE E H D+ RAGA + ++ YQA
Sbjct: 18 VLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSRALIGKSVELARKAREAYLAE---------NPHAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV S E A+HRP VEAL+ AG D LA ET+P+ E AL LL
Sbjct: 127 AYLADGSEYRGDYVRSAGE--FTAFHRPRVEALLDAGADLLACETLPSFTEIKALAALLA 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E+P +AW SF+ +D H S G + V++ LAN QI A+G+NC+ + + ++ +
Sbjct: 185 EYPRARAWFSFTLRDSEHLSDGTPLREVVSA--LANSPQIVALGINCIALENTTAALKHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
QS ++ +VYPN G
Sbjct: 243 -QSLTSLPLVVYPNSG 257
>gi|56207591|emb|CAI21298.1| novel protein containing a homocysteine S-methyltransferase domain
[Danio rerio]
Length = 318
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 149/263 (56%), Gaps = 18/263 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +++ + + G PLWS+ L T+P+A + H ++++G+D+I ++ YQA++
Sbjct: 14 ILDGGLATELEASGFQ-LQGDPLWSARVLHTDPQAIKDVHYRYLQSGSDVITTATYQASI 72
Query: 69 DNLTK-LGYSEQEALDLLHKSVQLMN-SAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ K LG +EA ++ +VQL + + +Q+P + + A S+GP
Sbjct: 73 EGFVKYLGVQPEEAQHMMMSAVQLAKETVSEFISQSPMSDRREPL--------VAGSVGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG+ L DGSEY+G Y D MT +L WHRP ++ LV+AG D +A+ETIP KEA ALVK+
Sbjct: 125 YGSFLHDGSEYTGAYEDKMTVEELKDWHRPQIQCLVKAGADLVAMETIPGLKEAEALVKV 184
Query: 187 LREFPGQKAWLSFSC----KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
L+EFP KAWLSFS +D+ S G S AV + Q+ A+GVNC V
Sbjct: 185 LKEFPETKAWLSFSSINLFQDNNSISSGRRFSEAVE--MACRSTQLVAVGVNCCPALLVK 242
Query: 243 TLVRCIK-QSHPTVQTIVYPNKG 264
L+ K + +VYPN G
Sbjct: 243 PLLESAKSHKRADLSWVVYPNSG 265
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 157/317 (49%), Gaps = 32/317 (10%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETA---ASI 320
+LDG +++ + + G PLWS+ L T+P+A + H +++ I TA ASI
Sbjct: 14 ILDGGLATELEASGFQ-LQGDPLWSARVLHTDPQAIKDVHYRYLQSGSDVITTATYQASI 72
Query: 321 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---TA 377
+ L E + H + S + L + V P + A
Sbjct: 73 EGFVKYLGVQPEEAQHMMMSAVQ-------------LAKETVSEFISQSPMSDRREPLVA 119
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
S+GPYG+ L DGSEY+G Y D MT +L WHRP ++ LV+AG D +A+ETIP KEA
Sbjct: 120 GSVGPYGSFLHDGSEYTGAYEDKMTVEELKDWHRPQIQCLVKAGADLVAMETIPGLKEAE 179
Query: 438 ALVKLLREFPGQKAWLSFSC----KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
ALVK+L+EFP KAWLSFS +D+ S G S AV + Q+ A+GVNC
Sbjct: 180 ALVKVLKEFPETKAWLSFSSINLFQDNNSISSGRRFSEAVE--MACRSTQLVAVGVNCCP 237
Query: 494 PSHVSTLVRCIK-QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552
V L+ K + +VYPN G WD V W TE S + +W +G
Sbjct: 238 ALLVKPLLESAKSHKRADLSWVVYPNSGEGWD-VTTGW-KTEMRTSFANLSLEWKAQGAL 295
Query: 553 IIGGCCEVTSYEIQQMR 569
IGGCC V +I +++
Sbjct: 296 WIGGCCRVRPADITELK 312
>gi|421733176|ref|ZP_16172290.1| homocysteine methyltransferase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|407072991|gb|EKE45990.1| homocysteine methyltransferase [Bacillus amyloliquefaciens subsp.
plantarum M27]
Length = 315
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/258 (38%), Positives = 146/258 (56%), Gaps = 13/258 (5%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V ++DG+ +++ R D LWS+ L PE + H ++ AGAD ++ YQ+
Sbjct: 13 VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAITASYQS 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
++ G E +A+ L+ SV+L A+D+ + L++ L+ AASIGP
Sbjct: 71 TIEGFAARGIPETDAIRLIQTSVELAAQARDEFWAHEENRLHRPKPLV------AASIGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY GHY +T+ +LI++HRP ++AL+ +G D LA ETIP EA A+ +L
Sbjct: 125 YGASLADGSEYRGHY--GLTDDELISFHRPRMKALIESGADLLACETIPCLSEAKAITRL 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L EFPG AW+SFS KD H S G IS + LL + QI AIG+NC ++ L+
Sbjct: 183 LEEFPGTYAWISFSAKDGRHISEGTPISE--CAALLDSCSQIAAIGINCTPIEYIPPLIE 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
IK++ + I YPN G
Sbjct: 241 EIKRAA-SKPIIAYPNSG 257
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 158/314 (50%), Gaps = 24/314 (7%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
YP V ++DG+ +++ R D LWS+ L PE + H ++ + A +
Sbjct: 11 YP---VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAIT 65
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA-----LIKPSISS 374
T+ G + E D I + +VE +A ++ A L +P
Sbjct: 66 ASYQSTI-------EGFAARGIPETDAIRLIQTSVELAAQARDEFWAHEENRLHRPK--P 116
Query: 375 QTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 434
AASIGPYG L DGSEY GHY +T+ +LI++HRP ++AL+ +G D LA ETIP
Sbjct: 117 LVAASIGPYGASLADGSEYRGHY--GLTDDELISFHRPRMKALIESGADLLACETIPCLS 174
Query: 435 EALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
EA A+ +LL EFPG AW+SFS KD H S G IS + LL + QI AIG+NC
Sbjct: 175 EAKAITRLLEEFPGTYAWISFSAKDGRHISEGTPISE--CAALLDSCSQIAAIGINCTPI 232
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554
++ L+ IK++ + I YPN G +D V W E W E GV++I
Sbjct: 233 EYIPPLIEEIKRAA-SKPIIAYPNSGEQYDPVTKTWKGAACENHFGKSAQSWYENGVSLI 291
Query: 555 GGCCEVTSYEIQQM 568
GGCC +IQ +
Sbjct: 292 GGCCRTKPADIQAI 305
>gi|306831535|ref|ZP_07464693.1| homocysteine S-methyltransferase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304426320|gb|EFM29434.1| homocysteine S-methyltransferase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 316
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 151/266 (56%), Gaps = 16/266 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + DV G LWS+ YL P + H ++R+GADI+ +S YQA V
Sbjct: 15 ILDGALGTELEKRGY-DVSGK-LWSAKYLLENPSVIQDLHDVYLRSGADILTTSSYQATV 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGP 126
L G SE+EALD++ +V L A+D + + + + L++G +GP
Sbjct: 73 QGLKDFGLSEKEALDIISLTVTLARQARDIFWNGLSDEAKKKRPYPLISG------DVGP 126
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
Y L DGSEY+G+Y +T+ + A+HRP ++AL+ AG D+L +ETIP EA AL+ L
Sbjct: 127 YAAYLADGSEYNGNY--QLTQEEYQAFHRPRIQALLSAGSDFLGIETIPNVAEAKALLDL 184
Query: 187 L-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
L EFP +A++SF+ +DD H S G I C QI A G+NC P+ +S L+
Sbjct: 185 LATEFPQTEAYISFTAQDDKHISDGTPIEEVAALC--EQSPQILAFGINCSSPAVISGLL 242
Query: 246 RCIKQSHPTVQTIVYPNKGVKLLDGS 271
+ I+ P + YPN G ++ DG+
Sbjct: 243 KRIRTVSPKKPLVTYPNSG-EIYDGA 267
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 155/310 (50%), Gaps = 28/310 (9%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ + DV G LWS+ YL P + H ++R + + TV
Sbjct: 15 ILDGALGTELEKRGY-DVSGK-LWSAKYLLENPSVIQDLHDVYLRSGADILTTSSYQATV 72
Query: 327 --LRDG--SEYSGHYVDSMT-----EADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA 377
L+D SE + S+T +A I W+ + EA + P IS
Sbjct: 73 QGLKDFGLSEKEALDIISLTVTLARQARDIFWNGLSDEAKKKRPY-------PLIS---- 121
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
+GPY L DGSEY+G+Y +T+ + A+HRP ++AL+ AG D+L +ETIP EA
Sbjct: 122 GDVGPYAAYLADGSEYNGNY--QLTQEEYQAFHRPRIQALLSAGSDFLGIETIPNVAEAK 179
Query: 438 ALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
AL+ LL EFP +A++SF+ +DD H S G I C QI A G+NC P+
Sbjct: 180 ALLDLLATEFPQTEAYISFTAQDDKHISDGTPIEEVAALC--EQSPQILAFGINCSSPAV 237
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDE-YSILHYVPQWLEEGVNIIG 555
+S L++ I+ P + YPN G ++D W D +++L W + G I+G
Sbjct: 238 ISGLLKRIRTVSPKKPLVTYPNSGEIYDGATQTWKSIPDNSHTLLENSRAWHQLGAKIVG 297
Query: 556 GCCEVTSYEI 565
GCC + +I
Sbjct: 298 GCCRTSPEDI 307
>gi|16077310|ref|NP_388123.1| homocysteine methyltransferase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221308054|ref|ZP_03589901.1| homocysteine methyltransferase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221312377|ref|ZP_03594182.1| homocysteine methyltransferase [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221317310|ref|ZP_03598604.1| homocysteine methyltransferase [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221321574|ref|ZP_03602868.1| homocysteine methyltransferase [Bacillus subtilis subsp. subtilis
str. SMY]
gi|402774481|ref|YP_006628425.1| homocysteine methylase [Bacillus subtilis QB928]
gi|452916367|ref|ZP_21964991.1| homocysteine S-methyltransferase [Bacillus subtilis MB73/2]
gi|81341836|sp|O31463.1|HMT_BACSU RecName: Full=Homocysteine S-methyltransferase YbgG; AltName:
Full=S-methylmethionine:homocysteine methyltransferase
gi|2632527|emb|CAB12035.1| homocysteine methylase using (R,S)AdoMet [Bacillus subtilis subsp.
subtilis str. 168]
gi|3599664|dbj|BAA33139.1| ybgG [Bacillus subtilis]
gi|402479666|gb|AFQ56175.1| Homocysteine methylase using (R,S)AdoMet [Bacillus subtilis QB928]
gi|407955931|dbj|BAM49171.1| homocysteine methyltransferase [Bacillus subtilis BEST7613]
gi|407963202|dbj|BAM56441.1| homocysteine methyltransferase [Bacillus subtilis BEST7003]
gi|452114865|gb|EME05263.1| homocysteine S-methyltransferase [Bacillus subtilis MB73/2]
Length = 315
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 145/256 (56%), Gaps = 13/256 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R D LWS+ L EPE + H D+ AGAD ++ YQ+
Sbjct: 15 VLDGAMATELERKGCNLNDS--LWSAKILMEEPELIKQVHTDYFAAGADCAITASYQSTF 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G SE EA L+ SV + A+D+ + LN+ ++ AASIGPYG
Sbjct: 73 EGFAARGLSEAEARRLIELSVSIAAEARDEFWSLEENRLNRPKPII------AASIGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G+Y +++E +LI +HRP ++AL+ AG D LA ETIP EA A+V+LL+
Sbjct: 127 AYLADGSEYRGNY--AISEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLK 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP AW+SFS KD H S G +A + L QI A+G+NC H+ +L+ +
Sbjct: 185 EFPETYAWISFSAKDGLHISDG--TPAADCASWLDEHRQIAALGINCTPLQHIPSLIEEL 242
Query: 249 KQSHPTVQTIVYPNKG 264
K+ + + IVYPN G
Sbjct: 243 KK-NTSKPIIVYPNSG 257
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 154/305 (50%), Gaps = 17/305 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ R D LWS+ L EPE + H D+ + A + T
Sbjct: 15 VLDGAMATELERKGCNLNDS--LWSAKILMEEPELIKQVHTDYFAAGADCAITASYQST- 71
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT---AASIGPY 383
+ G ++EA+ +V A ++ +L + ++ AASIGPY
Sbjct: 72 ------FEGFAARGLSEAEARRLIELSVSIAAEARDEFWSLEENRLNRPKPIIAASIGPY 125
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L DGSEY G+Y +++E +LI +HRP ++AL+ AG D LA ETIP EA A+V+LL
Sbjct: 126 GAYLADGSEYRGNY--AISEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLL 183
Query: 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
+EFP AW+SFS KD H S G +A + L QI A+G+NC H+ +L+
Sbjct: 184 KEFPETYAWISFSAKDGLHISDG--TPAADCASWLDEHRQIAALGINCTPLQHIPSLIEE 241
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
+K+ + + IVYPN G +D W S W E+G +IGGCC
Sbjct: 242 LKK-NTSKPIIVYPNSGEQYDPETKTWNGAACAESYGASARTWHEKGARLIGGCCRTKPE 300
Query: 564 EIQQM 568
IQ++
Sbjct: 301 NIQEI 305
>gi|430758733|ref|YP_007211018.1| hypothetical protein A7A1_3241 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|430023253|gb|AGA23859.1| Hypothetical protein YbgG [Bacillus subtilis subsp. subtilis str.
BSP1]
Length = 315
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 144/256 (56%), Gaps = 13/256 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R D LWS+ L EPE + H D+ AGAD ++ YQ+
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILMEEPELIKQVHTDYFAAGADCAITASYQSTF 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G SE EA L+ SV + A+D+ + LN+ ++ AASIGPYG
Sbjct: 73 EGFAARGLSEAEARRLIELSVSIAAEARDEFWSLKENRLNRPKPII------AASIGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G+Y +++E +LI +HRP ++AL+ AG D LA ETIP EA A+V+LL+
Sbjct: 127 AYLADGSEYRGNY--AISEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLK 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP AW+SFS KD H S G S + L QI A+G+NC H+ +L+ +
Sbjct: 185 EFPETYAWISFSAKDGLHISDGTPASDCAS--WLDEHRQIAALGINCTPLQHIPSLIEEL 242
Query: 249 KQSHPTVQTIVYPNKG 264
K+ + + IVYPN G
Sbjct: 243 KK-NTSKPIIVYPNSG 257
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 153/305 (50%), Gaps = 17/305 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ R D LWS+ L EPE + H D+ + A + T
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILMEEPELIKQVHTDYFAAGADCAITASYQST- 71
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT---AASIGPY 383
+ G ++EA+ +V A ++ +L + ++ AASIGPY
Sbjct: 72 ------FEGFAARGLSEAEARRLIELSVSIAAEARDEFWSLKENRLNRPKPIIAASIGPY 125
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L DGSEY G+Y +++E +LI +HRP ++AL+ AG D LA ETIP EA A+V+LL
Sbjct: 126 GAYLADGSEYRGNY--AISEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLL 183
Query: 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
+EFP AW+SFS KD H S G S + L QI A+G+NC H+ +L+
Sbjct: 184 KEFPETYAWISFSAKDGLHISDGTPASDCAS--WLDEHRQIAALGINCTPLQHIPSLIEE 241
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
+K+ + + IVYPN G +D W S W E+G +IGGCC
Sbjct: 242 LKK-NTSKPIIVYPNSGEQYDPETKTWNGAACAESYGASARTWHEKGARLIGGCCRTKPE 300
Query: 564 EIQQM 568
IQ++
Sbjct: 301 NIQEI 305
>gi|321313909|ref|YP_004206196.1| homocysteine methyltransferase [Bacillus subtilis BSn5]
gi|320020183|gb|ADV95169.1| homocysteine methyltransferase [Bacillus subtilis BSn5]
Length = 315
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 144/256 (56%), Gaps = 13/256 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R D LWS+ L EPE + H D+ AGAD ++ YQ+
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILMEEPELIKQVHTDYFAAGADCAITASYQSTF 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G SE EA L+ SV + A+D+ + LN+ ++ AASIGPYG
Sbjct: 73 EGFAARGLSEAEARRLIELSVSIAAEARDEFWSLKENRLNRPKPII------AASIGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G+Y +++E +LI +HRP ++AL+ AG D LA ETIP EA A+V+LL+
Sbjct: 127 AYLADGSEYRGNY--AISEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLK 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP AW+SFS KD H S G S + L QI A+G+NC H+ +L+ +
Sbjct: 185 EFPETYAWISFSAKDGLHISDGTPASDCAS--WLDEHRQIAALGINCTPLQHIPSLIEEL 242
Query: 249 KQSHPTVQTIVYPNKG 264
K+ + + IVYPN G
Sbjct: 243 KK-NTSKPIIVYPNSG 257
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 154/305 (50%), Gaps = 17/305 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ R D LWS+ L EPE + H D+ + A + T
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILMEEPELIKQVHTDYFAAGADCAITASYQST- 71
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT---AASIGPY 383
+ G ++EA+ +V A ++ +L + ++ AASIGPY
Sbjct: 72 ------FEGFAARGLSEAEARRLIELSVSIAAEARDEFWSLKENRLNRPKPIIAASIGPY 125
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L DGSEY G+Y +++E +LI +HRP ++AL+ AG D LA ETIP EA A+V+LL
Sbjct: 126 GAYLADGSEYRGNY--AISEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLL 183
Query: 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
+EFP AW+SFS KD H S G S + L QI A+G+NC H+ +L+
Sbjct: 184 KEFPETYAWISFSAKDGLHISDGTPASDCAS--WLDEHRQIAALGINCTPLQHIPSLIEE 241
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
+K+ + + IVYPN G +D W S W E+G +IGGCC
Sbjct: 242 LKK-NTSKPIIVYPNSGEQYDPETKTWNGAACAESYGASARTWHEKGARLIGGCCRTKPE 300
Query: 564 EIQQM 568
+IQ++
Sbjct: 301 DIQEI 305
>gi|288905453|ref|YP_003430675.1| homocysteine S-methyltransferase [Streptococcus gallolyticus UCN34]
gi|386337898|ref|YP_006034067.1| homocysteine S-methyltransferase [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|288732179|emb|CBI13744.1| Putative homocysteine S-methyltransferase [Streptococcus
gallolyticus UCN34]
gi|334280534|dbj|BAK28108.1| homocysteine S-methyltransferase [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
Length = 315
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 152/266 (57%), Gaps = 17/266 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + DV G LWS+ YL P + H ++R+GADI+ +S YQA V
Sbjct: 15 ILDGALGTELEKRGY-DVSGK-LWSAKYLLENPSVIQDLHDVYLRSGADILTTSSYQATV 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGP 126
L G SE+EALD++ +V L A+D + + + + L++G IGP
Sbjct: 73 QGLKDFGLSEKEALDIISLTVTLARQARDNFWNGLSDEAKKKRPYPLISG------DIGP 126
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
Y L DGSEY+G+Y +T+ + A+HRP ++AL+ AG D+L +ETIP EA AL+ L
Sbjct: 127 YAAYLADGSEYNGNY--QLTQEEYQAFHRPRIQALLSAGSDFLGIETIPNVAEAKALLDL 184
Query: 187 L-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
L EFP +A++SF+ +DD H S G I V C QI A G+NC P+ +S L+
Sbjct: 185 LATEFPQTEAYISFTAQDDKHISDGTPIEEVVALC--EQSPQILAFGINCSSPAVISGLL 242
Query: 246 RCIKQSHPTVQTIVYPNKGVKLLDGS 271
+ I+ P + YPN G ++ DG+
Sbjct: 243 KRIRTVSPK-PLVTYPNSG-EIYDGA 266
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 153/310 (49%), Gaps = 29/310 (9%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ + DV G LWS+ YL P + H ++R + + TV
Sbjct: 15 ILDGALGTELEKRGY-DVSGK-LWSAKYLLENPSVIQDLHDVYLRSGADILTTSSYQATV 72
Query: 327 --LRDGSEYSGHYVDSMTEADLIA-------WHRPNVEALVRAGVDYLALIKPSISSQTA 377
L+D +D ++ +A W+ + EA + P IS
Sbjct: 73 QGLKDFGLSEKEALDIISLTVTLARQARDNFWNGLSDEAKKKRPY-------PLIS---- 121
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
IGPY L DGSEY+G+Y +T+ + A+HRP ++AL+ AG D+L +ETIP EA
Sbjct: 122 GDIGPYAAYLADGSEYNGNY--QLTQEEYQAFHRPRIQALLSAGSDFLGIETIPNVAEAK 179
Query: 438 ALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
AL+ LL EFP +A++SF+ +DD H S G I V C QI A G+NC P+
Sbjct: 180 ALLDLLATEFPQTEAYISFTAQDDKHISDGTPIEEVVALC--EQSPQILAFGINCSSPAV 237
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDE-YSILHYVPQWLEEGVNIIG 555
+S L++ I+ P + YPN G ++D W D +++L W + G I+G
Sbjct: 238 ISGLLKRIRTVSPK-PLVTYPNSGEIYDGATQTWKSIPDNSHTLLENSRAWHQLGAKIVG 296
Query: 556 GCCEVTSYEI 565
GCC + +I
Sbjct: 297 GCCRTSPEDI 306
>gi|260222063|emb|CBA31253.1| Homocysteine S-methyltransferase ybgG [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 317
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/259 (39%), Positives = 142/259 (54%), Gaps = 13/259 (5%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ +LDG+ +++ R DG LWS+ L +PE H D+ AGAD+ ++ YQ
Sbjct: 17 RLMVLDGALATELERRGAYLNDG--LWSAKLLIEQPELIRAVHADYFAAGADVATTASYQ 74
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
A + T+ G S EA DL+ SV L A+D P + + L+ AAS+G
Sbjct: 75 ATFEAFTRRGMSRTEAADLMRLSVTLACEARDAFWAEPANRVGRLRPLV------AASVG 128
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG +L DGSEY G+Y ++ A L +HR ++ L +G D LA ETIP EALA+
Sbjct: 129 PYGAMLADGSEYRGNY--GLSRAALADFHRERMQVLSTSGADLLACETIPGLDEALAIAD 186
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
+L E AW+SFSCKD H GE ++ V + L A P I AIGVNC P HV++LV
Sbjct: 187 VLAEQNNITAWISFSCKDGEHNVQGERLADCVAA-LEAYP-HIVAIGVNCTAPEHVASLV 244
Query: 246 RCIKQSHPTVQTIVYPNKG 264
K + T +VYPN G
Sbjct: 245 EQAK-ARTTKPVLVYPNSG 262
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 157/319 (49%), Gaps = 34/319 (10%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIE---TAASIG 321
+ +LDG+ +++ R DG LWS+ L +PE H D+ + TA+
Sbjct: 18 LMVLDGALATELERRGAYLNDG--LWSAKLLIEQPELIRAVHADYFAAGADVATTASYQA 75
Query: 322 PYGTVLRDG---SEYSGHYVDSMT---EADLIAWHRPNVEALVRAGVDYLALIKPSISSQ 375
+ R G +E + S+T EA W P + + ++P +
Sbjct: 76 TFEAFTRRGMSRTEAADLMRLSVTLACEARDAFWAEP---------ANRVGRLRPLV--- 123
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
AAS+GPYG +L DGSEY G+Y ++ A L +HR ++ L +G D LA ETIP E
Sbjct: 124 -AASVGPYGAMLADGSEYRGNY--GLSRAALADFHRERMQVLSTSGADLLACETIPGLDE 180
Query: 436 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
ALA+ +L E AW+SFSCKD H GE ++ V + L A P I AIGVNC P
Sbjct: 181 ALAIADVLAEQNNITAWISFSCKDGEHNVQGERLADCVAA-LEAYP-HIVAIGVNCTAPE 238
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW---LDTEDEYSILHYVPQWLEEGVN 552
HV++LV K + T +VYPN G +D+ W D D Y+ +W +G
Sbjct: 239 HVASLVEQAK-ARTTKPVLVYPNSGEHYDAEGKVWTGACDPADAYA--EMAARWQAKGAR 295
Query: 553 IIGGCCEVTSYEIQQMRIM 571
+IGGCC +I+ +R M
Sbjct: 296 MIGGCCRTGPDDIRAVRHM 314
>gi|386756822|ref|YP_006230038.1| homocysteine methyltransferase [Bacillus sp. JS]
gi|384930104|gb|AFI26782.1| homocysteine methyltransferase [Bacillus sp. JS]
Length = 315
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/265 (38%), Positives = 150/265 (56%), Gaps = 13/265 (4%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R D LWS+ L EP+ + H D+ AGAD ++ YQ+
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILMEEPDLIKQVHTDYFAAGADCAITASYQSTF 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G S+ EA L+ SV + A+D+ + LN+ ++ AAS+GPYG
Sbjct: 73 EGFAARGLSKAEARRLIELSVSIAAEARDEFWSFEENRLNRPKPII------AASVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G+Y +++E +LI +HRP ++AL+ AG D LA ETIP EA A+V+LL+
Sbjct: 127 AYLADGSEYRGNY--AISEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLK 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP AW+SFS KD H S G +A + L QI A+G+NC H+S+L+ +
Sbjct: 185 EFPETYAWISFSAKDGLHISDG--TPAADCAAWLDEHRQIAALGINCTPLQHISSLIEEL 242
Query: 249 KQSHPTVQTIVYPNKGVKLLDGSFT 273
K+ + + IVYPN G + G+ T
Sbjct: 243 KK-NTSKPIIVYPNSGEQYDPGTKT 266
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 157/314 (50%), Gaps = 17/314 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ R D LWS+ L EP+ + H D+ + A + T
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILMEEPDLIKQVHTDYFAAGADCAITASYQST- 71
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT---AASIGPY 383
+ G +++A+ +V A ++ + + ++ AAS+GPY
Sbjct: 72 ------FEGFAARGLSKAEARRLIELSVSIAAEARDEFWSFEENRLNRPKPIIAASVGPY 125
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L DGSEY G+Y +++E +LI +HRP ++AL+ AG D LA ETIP EA A+V+LL
Sbjct: 126 GAYLADGSEYRGNY--AISEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLL 183
Query: 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
+EFP AW+SFS KD H S G +A + L QI A+G+NC H+S+L+
Sbjct: 184 KEFPETYAWISFSAKDGLHISDG--TPAADCAAWLDEHRQIAALGINCTPLQHISSLIEE 241
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
+K+ + + IVYPN G +D W S W E+G +IGGCC
Sbjct: 242 LKK-NTSKPIIVYPNSGEQYDPGTKTWNGAACAESYGASARIWHEKGAKLIGGCCRTKPE 300
Query: 564 EIQQMRIMIDEFNT 577
+IQ++ + T
Sbjct: 301 DIQEIAAWVRSLKT 314
>gi|410920922|ref|XP_003973932.1| PREDICTED: homocysteine S-methyltransferase 1-like [Takifugu
rubripes]
Length = 326
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 171/326 (52%), Gaps = 23/326 (7%)
Query: 251 SHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFI 310
S P ++ +Y + G +LDG +++ + G PLWS+ L T P+A + H F+
Sbjct: 3 SSPRIRHYLY-DDGPLILDGGLATELETQGFH-LQGDPLWSARLLHTNPQAIRDAHGRFL 60
Query: 311 RGHIETAASIGPYGTVLRDGSEYSGH-YVDSMTEADLIAWHRPNVEALVRAGVDYLALIK 369
+ A + T + H +V S DLI V+ A +++
Sbjct: 61 L----SGADVISTATYQASVEGFIRHLHVSSECAKDLIM---SAVQLAKEAVKSFVSETH 113
Query: 370 PSISS--QTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
PS S A S+GPYG L +GSEY+G Y + M+ +L AWHRP +E L AG D LA
Sbjct: 114 PSTSRCPLVAGSVGPYGAFLHNGSEYTGDYAEQMSVQELKAWHRPQIECLAAAGADLLAF 173
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN-PDQIQA 486
ETIP+ KEA ALV+LL+EFP KAWL+ SCKD S G + AV +AN Q+ A
Sbjct: 174 ETIPSIKEAEALVELLKEFPNTKAWLALSCKDVRSLSDGSPFADAVQ---MANRSQQLIA 230
Query: 487 IGVNCVRPSHVSTLV---RCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYV 543
+GVNC P V L+ RC+ + P + +VYPN G WDS W +TE ++
Sbjct: 231 VGVNCCPPQLVEPLLESARCLLR--PEISWVVYPNSGEDWDS-EQGWTETESS-PLIEMS 286
Query: 544 PQWLEEGVNIIGGCCEVTSYEIQQMR 569
W+++G +IGGCC ++ I ++R
Sbjct: 287 RTWMKQGAALIGGCCRISPAHIAKLR 312
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/261 (40%), Positives = 148/261 (56%), Gaps = 18/261 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +++ + G PLWS+ L T P+A + H F+ +GAD+I ++ YQA+V
Sbjct: 18 ILDGGLATELETQGFH-LQGDPLWSARLLHTNPQAIRDAHGRFLLSGADVISTATYQASV 76
Query: 69 DNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPY 127
+ + L S + A DL+ +VQL A +++T + A S+GPY
Sbjct: 77 EGFIRHLHVSSECAKDLIMSAVQLAKEAVKS-------FVSETHPSTSRCPLVAGSVGPY 129
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L +GSEY+G Y + M+ +L AWHRP +E L AG D LA ETIP+ KEA ALV+LL
Sbjct: 130 GAFLHNGSEYTGDYAEQMSVQELKAWHRPQIECLAAAGADLLAFETIPSIKEAEALVELL 189
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN-PDQIQAIGVNCVRPSHVSTLV- 245
+EFP KAWL+ SCKD S G + AV +AN Q+ A+GVNC P V L+
Sbjct: 190 KEFPNTKAWLALSCKDVRSLSDGSPFADAVQ---MANRSQQLIAVGVNCCPPQLVEPLLE 246
Query: 246 --RCIKQSHPTVQTIVYPNKG 264
RC+ + P + +VYPN G
Sbjct: 247 SARCLLR--PEISWVVYPNSG 265
>gi|383763011|ref|YP_005441993.1| homocysteine S-methyltransferase [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381383279|dbj|BAM00096.1| homocysteine S-methyltransferase [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 322
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/310 (34%), Positives = 148/310 (47%), Gaps = 19/310 (6%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
GV ++DG+ +++ R D LWS+ L PE H D++R + +
Sbjct: 12 NGVIIIDGALATELERRGADLSDA--LWSARLLIDAPELIRSVHLDYLRAGADVLITASY 69
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPS---ISSQTAAS 379
++ G + EA + R +V+ A +YLA + + AAS
Sbjct: 70 QASI-------EGFKRRGLNEAQVRNLFRLSVQLAAEAIEEYLAETQAGPARLPPLIAAS 122
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
IGPYG L DGSEY G Y ++ LIAWHRP V AL D A ETIP EA AL
Sbjct: 123 IGPYGAYLADGSEYRGDY--GLSVEALIAWHRPRVSALAETEADLFACETIPCLAEAEAL 180
Query: 440 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN-PDQIQAIGVNCVRPSHVS 498
++LL E+P AWLSFSC+D S GE + AV LAN +QI A+GVNC P V
Sbjct: 181 IRLLEEYPDMPAWLSFSCRDGESLSSGEPFAEAVR---LANRSEQIVAVGVNCTAPRFVE 237
Query: 499 TLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
+L++ I + + YPN G WD+ W++ +W G +IGGCC
Sbjct: 238 SLLQ-IARPLTDKPLLCYPNSGEAWDAEARCWVEGTGVTDFAEPARRWYAAGARLIGGCC 296
Query: 559 EVTSYEIQQM 568
T +I M
Sbjct: 297 RTTPADIAAM 306
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 139/262 (53%), Gaps = 21/262 (8%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V ++DG+ +++ R D LWS+ L PE H D++RAGAD++ ++ YQA
Sbjct: 14 VIIIDGALATELERRGADLSDA--LWSARLLIDAPELIRSVHLDYLRAGADVLITASYQA 71
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK---ENQTPDINLNKTFNLLTGHIETAAS 123
+++ + G +E + +L SVQL A ++ E Q L AAS
Sbjct: 72 SIEGFKRRGLNEAQVRNLFRLSVQLAAEAIEEYLAETQAGPARLPPLI---------AAS 122
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
IGPYG L DGSEY G Y ++ LIAWHRP V AL D A ETIP EA AL
Sbjct: 123 IGPYGAYLADGSEYRGDY--GLSVEALIAWHRPRVSALAETEADLFACETIPCLAEAEAL 180
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN-PDQIQAIGVNCVRPSHVS 242
++LL E+P AWLSFSC+D S GE + AV LAN +QI A+GVNC P V
Sbjct: 181 IRLLEEYPDMPAWLSFSCRDGESLSSGEPFAEAVR---LANRSEQIVAVGVNCTAPRFVE 237
Query: 243 TLVRCIKQSHPTVQTIVYPNKG 264
+L++ I + + YPN G
Sbjct: 238 SLLQ-IARPLTDKPLLCYPNSG 258
>gi|428277657|ref|YP_005559392.1| homocysteine methyltransferase [Bacillus subtilis subsp. natto
BEST195]
gi|291482614|dbj|BAI83689.1| homocysteine methyltransferase [Bacillus subtilis subsp. natto
BEST195]
Length = 315
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 144/256 (56%), Gaps = 13/256 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R D LWS+ L EP + H D+ AGAD ++ YQ+
Sbjct: 15 VLDGAMATELERKGCNLNDS--LWSAKILMEEPNLIKQVHTDYFAAGADCAITASYQSTF 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G SE EA L+ SV + A+D+ + LN+ ++ AAS+GPYG
Sbjct: 73 EGFAARGLSEAEARRLIELSVSIAAEARDEFWSLEENRLNRPKPII------AASVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G+Y +++E +LI +HRP ++AL+ AG D LA ETIP EA A+V+LL+
Sbjct: 127 AYLADGSEYRGNY--AISEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLK 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP AW+SFS KD H S G +A + L QI A+G+NC H+ +L+ +
Sbjct: 185 EFPETYAWISFSAKDGLHISDG--TPAADCASWLDEHRQIAALGINCTPLQHIPSLIEEL 242
Query: 249 KQSHPTVQTIVYPNKG 264
K+ + + IVYPN G
Sbjct: 243 KK-NTSKPIIVYPNSG 257
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 153/305 (50%), Gaps = 17/305 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ R D LWS+ L EP + H D+ + A + T
Sbjct: 15 VLDGAMATELERKGCNLNDS--LWSAKILMEEPNLIKQVHTDYFAAGADCAITASYQST- 71
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT---AASIGPY 383
+ G ++EA+ +V A ++ +L + ++ AAS+GPY
Sbjct: 72 ------FEGFAARGLSEAEARRLIELSVSIAAEARDEFWSLEENRLNRPKPIIAASVGPY 125
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L DGSEY G+Y +++E +LI +HRP ++AL+ AG D LA ETIP EA A+V+LL
Sbjct: 126 GAYLADGSEYRGNY--AISEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLL 183
Query: 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
+EFP AW+SFS KD H S G +A + L QI A+G+NC H+ +L+
Sbjct: 184 KEFPETYAWISFSAKDGLHISDG--TPAADCASWLDEHRQIAALGINCTPLQHIPSLIEE 241
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
+K+ + + IVYPN G +D W S W E+G +IGGCC
Sbjct: 242 LKK-NTSKPIIVYPNSGEQYDPETKTWNGAACAESYGASARTWHEKGARLIGGCCRTKPE 300
Query: 564 EIQQM 568
IQ++
Sbjct: 301 NIQEI 305
>gi|268679857|ref|YP_003304288.1| homocysteine S-methyltransferase [Sulfurospirillum deleyianum DSM
6946]
gi|268617888|gb|ACZ12253.1| homocysteine S-methyltransferase [Sulfurospirillum deleyianum DSM
6946]
Length = 311
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 141/261 (54%), Gaps = 17/261 (6%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG+F +++ R D LWS+ +L +PEA E H D++RAG+D I ++ YQA
Sbjct: 13 VFILDGAFGTELERKGYDINDS--LWSAKFLMEKPEAIAEVHLDYLRAGSDCITTASYQA 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + K G SE+EA L+ SVQ+ +D + + N K L AAS+GP
Sbjct: 71 SFEGFMKRGMSEEEAKALIASSVQIAKKVRD-DFWADETNRTKRLKPL-----VAASVGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSE+ G Y ++ L A+H + L+ A D LA ETIP KEA AL L
Sbjct: 125 YGAYLADGSEFRGDY--ALDVEALQAFHAKRLLTLIEAKPDLLACETIPCLKEAKALCTL 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLANPDQIQAIGVNCVRPSHVSTL 244
L ++P AW+SFS KD H + GE +V C L N I AIG+NC P + +L
Sbjct: 183 LEDYPDVSAWMSFSAKDGEHINSGE----SVRECAQFLENQKNIVAIGINCTAPEFIESL 238
Query: 245 VRCIKQSHPTVQTIVYPNKGV 265
+ IK + IVYPN G
Sbjct: 239 IGEIKAVSSKL-IIVYPNGGA 258
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 160/321 (49%), Gaps = 39/321 (12%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAA 318
N+ V +LDG+F +++ R D LWS+ +L +PEA E H D++R I TA+
Sbjct: 10 NQFVFILDGAFGTELERKGYDINDS--LWSAKFLMEKPEAIAEVHLDYLRAGSDCITTAS 67
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA-------LIKPS 371
+ ++ G M+E + A +V+ + D+ A +KP
Sbjct: 68 YQASFEGFMKRG----------MSEEEAKALIASSVQIAKKVRDDFWADETNRTKRLKPL 117
Query: 372 ISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
+ AAS+GPYG L DGSE+ G Y ++ L A+H + L+ A D LA ETIP
Sbjct: 118 V----AASVGPYGAYLADGSEFRGDY--ALDVEALQAFHAKRLLTLIEAKPDLLACETIP 171
Query: 432 AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLANPDQIQAIGV 489
KEA AL LL ++P AW+SFS KD H + GE +V C L N I AIG+
Sbjct: 172 CLKEAKALCTLLEDYPDVSAWMSFSAKDGEHINSGE----SVRECAQFLENQKNIVAIGI 227
Query: 490 NCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW--LDTEDEYSILHYVPQWL 547
NC P + +L+ IK + IVYPN G ++++ W L Y + Y W
Sbjct: 228 NCTAPEFIESLIGEIKAVSSKL-IIVYPNGGATYNALTKTWNGLSKNASYGKMAY--GWY 284
Query: 548 EEGVNIIGGCCEVTSYEIQQM 568
++G +IGGCC+ T +I Q+
Sbjct: 285 QKGARLIGGCCQTTPEDIAQI 305
>gi|449092935|ref|YP_007425426.1| homocysteine methyltransferase [Bacillus subtilis XF-1]
gi|449026850|gb|AGE62089.1| homocysteine methyltransferase [Bacillus subtilis XF-1]
Length = 315
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 143/256 (55%), Gaps = 13/256 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R D LWS+ L EP + H D+ AGAD ++ YQ+
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILMEEPNLIKQVHTDYFAAGADCAITASYQSTF 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G SE EA L+ SV + A+D+ + LN+ ++ AAS+GPYG
Sbjct: 73 EGFAARGLSEAEARRLIELSVSIAAEARDEFWSLEENRLNRPKPII------AASVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G+Y ++ E +LI +HRP ++AL+ AG D LA ETIP EA A+V+LL+
Sbjct: 127 AYLADGSEYRGNY--AIPEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLK 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP AW+SFS KD H S G +A + L QI A+G+NC H+ +L+ +
Sbjct: 185 EFPETYAWISFSAKDGLHISDG--TPAADCASWLDEHRQIAALGINCTPLQHIPSLIEEL 242
Query: 249 KQSHPTVQTIVYPNKG 264
K+ + + IVYPN G
Sbjct: 243 KK-NTSKPIIVYPNSG 257
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 153/305 (50%), Gaps = 17/305 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ R D LWS+ L EP + H D+ + A + T
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILMEEPNLIKQVHTDYFAAGADCAITASYQST- 71
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT---AASIGPY 383
+ G ++EA+ +V A ++ +L + ++ AAS+GPY
Sbjct: 72 ------FEGFAARGLSEAEARRLIELSVSIAAEARDEFWSLEENRLNRPKPIIAASVGPY 125
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L DGSEY G+Y ++ E +LI +HRP ++AL+ AG D LA ETIP EA A+V+LL
Sbjct: 126 GAYLADGSEYRGNY--AIPEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLL 183
Query: 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
+EFP AW+SFS KD H S G +A + L QI A+G+NC H+ +L+
Sbjct: 184 KEFPETYAWISFSAKDGLHISDG--TPAADCASWLDEHRQIAALGINCTPLQHIPSLIEE 241
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
+K+ + + IVYPN G +D W S W E+G +IGGCC
Sbjct: 242 LKK-NTSKPIIVYPNSGEQYDPETKTWNGAACAESYGASARTWHEKGARLIGGCCRTKPE 300
Query: 564 EIQQM 568
+IQ++
Sbjct: 301 DIQEI 305
>gi|350264480|ref|YP_004875787.1| homocysteine S-methyltransferase [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|349597367|gb|AEP85155.1| homocysteine S-methyltransferase [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 296
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/234 (40%), Positives = 133/234 (56%), Gaps = 11/234 (4%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQ 90
LWS+ L EP+ + H D+ AGAD ++ YQ+ + G SE +A L+ SV
Sbjct: 16 LWSAKILMEEPDLIKQVHTDYFAAGADCAITASYQSTFEGFAARGLSEAKARRLIEMSVS 75
Query: 91 LMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADL 150
+ A+D+ + LN+ ++ AASIGPYG L DGSEY GHY ++E +L
Sbjct: 76 IAAEARDEFWALEENRLNRPKPII------AASIGPYGAYLADGSEYRGHY--GISEDEL 127
Query: 151 IAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG 210
+ +HRP ++AL+ AG D LA ETIP EA A+V+LL+EFP AW+SFS KD H S G
Sbjct: 128 VEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLKEFPETYAWISFSAKDGLHISDG 187
Query: 211 ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+A + L QI A+G+NC H+ +L+ +K+ H + I YPN G
Sbjct: 188 --TPAAGCASWLDEHRQIAALGINCTPLQHIPSLIEELKK-HTSKPIIAYPNSG 238
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 141/283 (49%), Gaps = 15/283 (5%)
Query: 289 LWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA 348
LWS+ L EP+ + H D+ + A + T + G ++EA
Sbjct: 16 LWSAKILMEEPDLIKQVHTDYFAAGADCAITASYQST-------FEGFAARGLSEAKARR 68
Query: 349 WHRPNVEALVRAGVDYLALIKPSISSQT---AASIGPYGTVLRDGSEYSGHYVDSMTEAD 405
+V A ++ AL + ++ AASIGPYG L DGSEY GHY ++E +
Sbjct: 69 LIEMSVSIAAEARDEFWALEENRLNRPKPIIAASIGPYGAYLADGSEYRGHY--GISEDE 126
Query: 406 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSH 465
L+ +HRP ++AL+ AG D LA ETIP EA A+V+LL+EFP AW+SFS KD H S
Sbjct: 127 LVEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLKEFPETYAWISFSAKDGLHISD 186
Query: 466 GELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDS 525
G +A + L QI A+G+NC H+ +L+ +K+ H + I YPN G +D
Sbjct: 187 G--TPAAGCASWLDEHRQIAALGINCTPLQHIPSLIEELKK-HTSKPIIAYPNSGEQYDP 243
Query: 526 VHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
W W E+G +IGGCC +I+++
Sbjct: 244 ETKTWNGAACAEPYGQSARMWHEKGAKLIGGCCRTKPEDIKEI 286
>gi|398309337|ref|ZP_10512811.1| homocysteine methyltransferase [Bacillus mojavensis RO-H-1]
Length = 315
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 141/256 (55%), Gaps = 13/256 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R D LWS+ L +PE + H D+ AGAD ++ YQ+
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILMEQPELIKQVHADYFAAGADCAITASYQSTF 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G SE EA L+ SV + A+D+ + LN+ ++ AAS+GPYG
Sbjct: 73 EGFAARGLSEAEARRLIQMSVSIAAEARDEFWAQKENRLNRPKPIV------AASVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G+Y +TE +L +HRP ++AL+ AG D LA ETIP EA A+V LL+
Sbjct: 127 AYLADGSEYRGNY--GITEEELAEFHRPRMKALIDAGADVLACETIPCLTEAKAIVSLLK 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP AW SFS KD H S G +A + L Q A+G+NC H+S+L+ +
Sbjct: 185 EFPDTYAWFSFSAKDGLHISDG--TPAADCASWLDQHSQAAAVGINCTPLQHISSLIAEL 242
Query: 249 KQSHPTVQTIVYPNKG 264
K+ + + IVYPN G
Sbjct: 243 KK-NTSKPIIVYPNSG 257
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 149/305 (48%), Gaps = 17/305 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ R D LWS+ L +PE + H D+ + A + T
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILMEQPELIKQVHADYFAAGADCAITASYQST- 71
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---TAASIGPY 383
+ G ++EA+ + +V A ++ A + ++ AAS+GPY
Sbjct: 72 ------FEGFAARGLSEAEARRLIQMSVSIAAEARDEFWAQKENRLNRPKPIVAASVGPY 125
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L DGSEY G+Y +TE +L +HRP ++AL+ AG D LA ETIP EA A+V LL
Sbjct: 126 GAYLADGSEYRGNY--GITEEELAEFHRPRMKALIDAGADVLACETIPCLTEAKAIVSLL 183
Query: 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
+EFP AW SFS KD H S G +A + L Q A+G+NC H+S+L+
Sbjct: 184 KEFPDTYAWFSFSAKDGLHISDG--TPAADCASWLDQHSQAAAVGINCTPLQHISSLIAE 241
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
+K+ + + IVYPN G +D W W E G +IGGCC
Sbjct: 242 LKK-NTSKPIIVYPNSGEQYDPDTKTWNGAACGEPYGQSARIWFENGAKLIGGCCRTKPE 300
Query: 564 EIQQM 568
+I+++
Sbjct: 301 DIKEI 305
>gi|418034678|ref|ZP_12673148.1| homocysteine methyltransferase [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|351468603|gb|EHA28819.1| homocysteine methyltransferase [Bacillus subtilis subsp. subtilis
str. SC-8]
Length = 296
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 134/234 (57%), Gaps = 11/234 (4%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQ 90
LWS+ L EPE + H D+ AGAD ++ YQ+ + G SE EA L+ SV
Sbjct: 16 LWSAKILMEEPELIKQVHTDYFAAGADCAITASYQSTFEGFAARGLSEAEARRLIELSVS 75
Query: 91 LMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADL 150
+ A+D+ + LN+ ++ AASIGPYG L DGSEY G+Y +++E +L
Sbjct: 76 IAAEARDEFWSLKENRLNRPKPII------AASIGPYGAYLADGSEYRGNY--AISEDEL 127
Query: 151 IAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG 210
I +HRP ++AL+ AG D LA ETIP EA A+V+LL+EFP AW+SFS KD H S G
Sbjct: 128 IEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLKEFPETYAWISFSAKDGLHISDG 187
Query: 211 ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
S + L QI A+G+NC H+ +L+ +K+ + + IVYPN G
Sbjct: 188 TPASDCAS--WLDEHRQIAALGINCTPLQHIPSLIEELKK-NTSKPIIVYPNSG 238
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 144/283 (50%), Gaps = 15/283 (5%)
Query: 289 LWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA 348
LWS+ L EPE + H D+ + A + T + G ++EA+
Sbjct: 16 LWSAKILMEEPELIKQVHTDYFAAGADCAITASYQST-------FEGFAARGLSEAEARR 68
Query: 349 WHRPNVEALVRAGVDYLALIKPSISSQT---AASIGPYGTVLRDGSEYSGHYVDSMTEAD 405
+V A ++ +L + ++ AASIGPYG L DGSEY G+Y +++E +
Sbjct: 69 LIELSVSIAAEARDEFWSLKENRLNRPKPIIAASIGPYGAYLADGSEYRGNY--AISEDE 126
Query: 406 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSH 465
LI +HRP ++AL+ AG D LA ETIP EA A+V+LL+EFP AW+SFS KD H S
Sbjct: 127 LIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLKEFPETYAWISFSAKDGLHISD 186
Query: 466 GELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDS 525
G S + L QI A+G+NC H+ +L+ +K+ + + IVYPN G +D
Sbjct: 187 GTPASDCAS--WLDEHRQIAALGINCTPLQHIPSLIEELKK-NTSKPIIVYPNSGEQYDP 243
Query: 526 VHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
W S W E+G +IGGCC +IQ++
Sbjct: 244 ETKTWNGAACAESYGASARTWHEKGARLIGGCCRTKPEDIQEI 286
>gi|163943202|ref|YP_001642432.1| homocysteine methyltransferase [Bacillus weihenstephanensis KBAB4]
gi|163865399|gb|ABY46457.1| homocysteine S-methyltransferase [Bacillus weihenstephanensis
KBAB4]
Length = 325
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 145/262 (55%), Gaps = 22/262 (8%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ H D PLWS+ L PE + H D+ RAGAD ++ YQA
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAMTASYQA 74
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAAS 123
+ + G EQEAL+L+ K+V L A+D KEN N+ L+ AS
Sbjct: 75 TISGFSARGIQEQEALELIKKTVLLARRARDDFWKEN----TQTNRPKPLVV------AS 124
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 125 VGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVL 182
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
LLREFP AWLSFS K++ S G +L+ A + +QI AIG+NC + V+
Sbjct: 183 ETLLREFPATYAWLSFSLKNEKEISEGMKLVECAR---VFEKSEQIVAIGINCAPVTVVT 239
Query: 243 TLVRCIKQSHPTVQTIVYPNKG 264
++ ++ ++ IVYPN G
Sbjct: 240 GAIQELR-ANTKKPIIVYPNSG 260
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 153/311 (49%), Gaps = 26/311 (8%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG+ +++ H D PLWS+ L PE + H D+ R + A +
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAMTASYQA 74
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA------LIKPSISSQTAA 378
T+ SG + E + + + V RA D+ KP + A
Sbjct: 75 TI-------SGFSARGIQEQEALELIKKTVLLARRARDDFWKENTQTNRPKPLV----VA 123
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA
Sbjct: 124 SVGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARV 181
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
L LLREFP AWLSFS K++ S G +L+ A + +QI AIG+NC + V
Sbjct: 182 LETLLREFPATYAWLSFSLKNEKEISEGMKLVECAR---VFEKSEQIVAIGINCAPVTVV 238
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
+ ++ ++ ++ IVYPN G ++ W E ++ +W + G +IGGC
Sbjct: 239 TGAIQELR-ANTKKPIIVYPNSGETYNPETKTWHGHEQCNALDIQSEEWYQAGARLIGGC 297
Query: 558 CEVTSYEIQQM 568
C T Y I+++
Sbjct: 298 CRTTPYHIEEI 308
>gi|423387943|ref|ZP_17365194.1| hypothetical protein ICE_05684 [Bacillus cereus BAG1X1-2]
gi|401627287|gb|EJS45161.1| hypothetical protein ICE_05684 [Bacillus cereus BAG1X1-2]
Length = 325
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/262 (39%), Positives = 145/262 (55%), Gaps = 22/262 (8%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ H D PLWS+ L PE + H D+ RAGAD ++ YQA
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQA 74
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAAS 123
+ + G EQEAL+L+ K+V L A+D KEN N+ L+ AS
Sbjct: 75 TISGFSARGIQEQEALELIKKTVLLARKARDDFWKEN----TQTNRPKPLVV------AS 124
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G+YV +T+ L +HR + AL+ AG D LA ETIP +EA L
Sbjct: 125 VGPYGAYLADGSEYVGNYV--VTDKTLADFHRSRMSALIEAGADLLAFETIPCLQEARVL 182
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
LLREFP AWLSFS K++ S G +L+ A + +QI AIG+NC + V+
Sbjct: 183 DTLLREFPETYAWLSFSLKNEKEISEGMKLVECAR---VFEKSEQIVAIGINCAPVTVVT 239
Query: 243 TLVRCIKQSHPTVQTIVYPNKG 264
++ ++ ++ IVYPN G
Sbjct: 240 GAIQKLR-ANTKKPIIVYPNSG 260
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 153/311 (49%), Gaps = 26/311 (8%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG+ +++ H D PLWS+ L PE + H D+ R + A +
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQA 74
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA------LIKPSISSQTAA 378
T+ SG + E + + + V +A D+ KP + A
Sbjct: 75 TI-------SGFSARGIQEQEALELIKKTVLLARKARDDFWKENTQTNRPKPLV----VA 123
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG L DGSEY G+YV +T+ L +HR + AL+ AG D LA ETIP +EA
Sbjct: 124 SVGPYGAYLADGSEYVGNYV--VTDKTLADFHRSRMSALIEAGADLLAFETIPCLQEARV 181
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
L LLREFP AWLSFS K++ S G +L+ A + +QI AIG+NC + V
Sbjct: 182 LDTLLREFPETYAWLSFSLKNEKEISEGMKLVECAR---VFEKSEQIVAIGINCAPVTVV 238
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
+ ++ ++ ++ IVYPN G ++ W E ++ +W + G +IGGC
Sbjct: 239 TGAIQKLR-ANTKKPIIVYPNSGETYNPETKTWHGHEQCDTLDIQSEEWYQAGARLIGGC 297
Query: 558 CEVTSYEIQQM 568
C T Y I+++
Sbjct: 298 CRTTPYHIEEI 308
>gi|423566360|ref|ZP_17542634.1| hypothetical protein II5_05762 [Bacillus cereus MSX-A1]
gi|401191999|gb|EJQ99020.1| hypothetical protein II5_05762 [Bacillus cereus MSX-A1]
Length = 325
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 146/262 (55%), Gaps = 22/262 (8%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ H D PLWS+ L PE + H D+ RAGAD ++ YQA
Sbjct: 17 IMLLDGALATELEGHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQA 74
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAAS 123
+ + G EQEAL+L+ K+V L A+D KEN I N+ L+ AS
Sbjct: 75 TISGFSARGIQEQEALELIKKTVLLARRARDDFWKEN----IQTNRPKPLVV------AS 124
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 125 VGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVL 182
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
LLREFP AWLSFS K++ S G +L+ A + +QI AIG+NC + V+
Sbjct: 183 DTLLREFPETYAWLSFSLKNEKEISEGMKLVECAR---VFEKSEQIVAIGINCAPVTVVT 239
Query: 243 TLVRCIKQSHPTVQTIVYPNKG 264
++ ++ ++ I+YPN G
Sbjct: 240 GAIQELR-ANTKKPIIIYPNSG 260
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 153/310 (49%), Gaps = 24/310 (7%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG+ +++ H D PLWS+ L PE + H D+ R + A +
Sbjct: 17 IMLLDGALATELEGHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQA 74
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-----TAAS 379
T+ SG + E + + + V RA D+ K +I + AS
Sbjct: 75 TI-------SGFSARGIQEQEALELIKKTVLLARRARDDFW---KENIQTNRPKPLVVAS 124
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 125 VGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVL 182
Query: 440 VKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
LLREFP AWLSFS K++ S G +L+ A + +QI AIG+NC + V+
Sbjct: 183 DTLLREFPETYAWLSFSLKNEKEISEGMKLVECAR---VFEKSEQIVAIGINCAPVTVVT 239
Query: 499 TLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
++ ++ ++ I+YPN G ++ W E ++ +W G +IGGCC
Sbjct: 240 GAIQELR-ANTKKPIIIYPNSGETYNPETKTWHGHEKCNALDIQSDEWYRAGARLIGGCC 298
Query: 559 EVTSYEIQQM 568
T Y I+++
Sbjct: 299 RTTPYHIEEI 308
>gi|423531861|ref|ZP_17508286.1| hypothetical protein IGE_05393 [Bacillus cereus HuB1-1]
gi|402443260|gb|EJV75170.1| hypothetical protein IGE_05393 [Bacillus cereus HuB1-1]
Length = 325
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/262 (39%), Positives = 145/262 (55%), Gaps = 22/262 (8%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ H D PLWS+ L PE + H D+ RAGAD ++ YQA
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQA 74
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAAS 123
+ + G EQEAL+L+ K+V L A+D KEN N+ L+ AS
Sbjct: 75 TISGFSARGIQEQEALELIKKTVLLARKARDDFWKEN----TQTNRPKPLVV------AS 124
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G+YV +T+ L +HR + AL+ AG D LA ETIP +EA L
Sbjct: 125 VGPYGAYLADGSEYVGNYV--VTDKTLADFHRSRMSALIEAGADLLAFETIPCLQEARVL 182
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
LLREFP AWLSFS K++ S G +L+ A + +QI AIG+NC + V+
Sbjct: 183 DTLLREFPETYAWLSFSLKNEKEISEGMKLVECAR---VFEKSEQIVAIGINCAPVTVVT 239
Query: 243 TLVRCIKQSHPTVQTIVYPNKG 264
++ ++ ++ IVYPN G
Sbjct: 240 GAIQELR-ANTKKPIIVYPNSG 260
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 153/311 (49%), Gaps = 26/311 (8%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG+ +++ H D PLWS+ L PE + H D+ R + A +
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQA 74
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA------LIKPSISSQTAA 378
T+ SG + E + + + V +A D+ KP + A
Sbjct: 75 TI-------SGFSARGIQEQEALELIKKTVLLARKARDDFWKENTQTNRPKPLV----VA 123
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG L DGSEY G+YV +T+ L +HR + AL+ AG D LA ETIP +EA
Sbjct: 124 SVGPYGAYLADGSEYVGNYV--VTDKTLADFHRSRMSALIEAGADLLAFETIPCLQEARV 181
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
L LLREFP AWLSFS K++ S G +L+ A + +QI AIG+NC + V
Sbjct: 182 LDTLLREFPETYAWLSFSLKNEKEISEGMKLVECAR---VFEKSEQIVAIGINCAPVTVV 238
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
+ ++ ++ ++ IVYPN G ++ W E ++ +W + G +IGGC
Sbjct: 239 TGAIQELR-ANTKKPIIVYPNSGETYNPETKTWHGHEQCNTLDIQSKEWYQAGARLIGGC 297
Query: 558 CEVTSYEIQQM 568
C T Y I+++
Sbjct: 298 CRTTPYHIEEI 308
>gi|401762462|ref|YP_006577469.1| homocysteine methyltransferase [Enterobacter cloacae subsp. cloacae
ENHKU01]
gi|400173996|gb|AFP68845.1| homocysteine methyltransferase [Enterobacter cloacae subsp. cloacae
ENHKU01]
Length = 310
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 161/322 (50%), Gaps = 17/322 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + + +LDG+ +++ D LWS+ L PE E H
Sbjct: 1 MSQNNPL--TALLEKQPFVVLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + EA A +VE +A YLA
Sbjct: 57 DYYRAGAQVAITASYQATP-------AGFAARGLDEAQSRALIGKSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G YV S EA A+HRP VEAL+ AG D LA
Sbjct: 110 NPQAGALLVAGSVGPYGAYLADGSEYRGDYVRS-AEA-FTAFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P+ E AL LL E+P +AW SF+ +D H S G + V +LAN I A+
Sbjct: 168 ETLPSFGEIKALAALLAEYPRARAWFSFTLRDSEHLSDGTPLREVVD--VLANSPHIVAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQW 546
G+NC+ + + ++ + QS + +VYPN G +D+V W E ++ Y+PQW
Sbjct: 226 GINCIALENTTAALKHL-QSLTALPLVVYPNSGEHYDAVTKTWHHHGEACETLAGYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
L G +IGGCC T +I ++
Sbjct: 285 LAAGAKLIGGCCRTTPKDIAEL 306
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 133/256 (51%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE E H D+ RAGA + ++ YQA
Sbjct: 18 VLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSRALIGKSVELARKAREAYLAE---------NPQAGALLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV S EA A+HRP VEAL+ AG D LA ET+P+ E AL LL
Sbjct: 127 AYLADGSEYRGDYVRS-AEA-FTAFHRPRVEALLDAGADLLACETLPSFGEIKALAALLA 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E+P +AW SF+ +D H S G + V +LAN I A+G+NC+ + + ++ +
Sbjct: 185 EYPRARAWFSFTLRDSEHLSDGTPLREVVD--VLANSPHIVALGINCIALENTTAALKHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
QS + +VYPN G
Sbjct: 243 -QSLTALPLVVYPNSG 257
>gi|389578437|ref|ZP_10168464.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Desulfobacter postgatei
2ac9]
gi|389400072|gb|EIM62294.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Desulfobacter postgatei
2ac9]
Length = 312
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 160/309 (51%), Gaps = 17/309 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIE---TAASIGPY 323
++DG +++ R D PLWS+ L P+ H D++ + TA+ +
Sbjct: 16 IIDGGLGTELERRGCNLDD--PLWSARLLADNPDMIAAVHSDYLHAGADCLITASYQATF 73
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPY 383
+ R G Y+ V ++ + + + V+A V+ + +KP + AAS+GPY
Sbjct: 74 QGLARRG--YTPEQVKNLIRS-AVTLAKNIVDAFWADPVNRVNRLKPLV----AASVGPY 126
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L D SEY+G Y S++E +L+ +H+ ++ LV AG D LA ET+P EA ALV+LL
Sbjct: 127 GAFLADRSEYTGKY--SISEDELVDFHKERLKILVSAGPDLLACETLPCFAEARALVRLL 184
Query: 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
+ AW SFS +D H S GE + L + AIG+NC P HV++LVR
Sbjct: 185 EDLDAPPAWFSFSARDGQHISSGEALRDCAQ--WLDGKPCVAAIGINCTDPLHVASLVRE 242
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
I+ S +VYPNKG V++S+ W D S QW ++G +IGGCC T
Sbjct: 243 IR-SMTEKPVVVYPNKGRVYNSLTNAWTPKSDLPSFGEMAVQWAKDGARLIGGCCRTTPE 301
Query: 564 EIQQMRIMI 572
+I+Q+ + +
Sbjct: 302 DIRQLALAL 310
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/259 (36%), Positives = 139/259 (53%), Gaps = 13/259 (5%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K ++DG +++ R D PLWS+ L P+ H D++ AGAD + ++ YQ
Sbjct: 13 KYLIIDGGLGTELERRGCNLDD--PLWSARLLADNPDMIAAVHSDYLHAGADCLITASYQ 70
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
A L + GY+ ++ +L+ +V L + D P +N+ L+ AAS+G
Sbjct: 71 ATFQGLARRGYTPEQVKNLIRSAVTLAKNIVDAFWADPVNRVNRLKPLV------AASVG 124
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L D SEY+G Y S++E +L+ +H+ ++ LV AG D LA ET+P EA ALV+
Sbjct: 125 PYGAFLADRSEYTGKY--SISEDELVDFHKERLKILVSAGPDLLACETLPCFAEARALVR 182
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
LL + AW SFS +D H S GE + L + AIG+NC P HV++LV
Sbjct: 183 LLEDLDAPPAWFSFSARDGQHISSGEALRDCAQ--WLDGKPCVAAIGINCTDPLHVASLV 240
Query: 246 RCIKQSHPTVQTIVYPNKG 264
R I+ S +VYPNKG
Sbjct: 241 REIR-SMTEKPVVVYPNKG 258
>gi|423369763|ref|ZP_17347193.1| hypothetical protein IC3_04862 [Bacillus cereus VD142]
gi|401076047|gb|EJP84407.1| hypothetical protein IC3_04862 [Bacillus cereus VD142]
Length = 325
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 145/262 (55%), Gaps = 22/262 (8%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ H D PLWS+ L PE + H D+ RAGAD ++ YQA
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQA 74
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAAS 123
+ + G EQEAL+L+ K+V L A+D KEN N+ L+ AS
Sbjct: 75 TISGFSTRGIQEQEALELIKKTVLLARRARDDFWKEN----TQTNRPKPLVV------AS 124
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 125 VGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVL 182
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
LLREFP AWLSFS K++ S G +L+ A + +QI AIG+NC + V+
Sbjct: 183 DTLLREFPATYAWLSFSLKNEKEVSEGMKLVECAR---VFEKSEQIVAIGINCAPVTVVT 239
Query: 243 TLVRCIKQSHPTVQTIVYPNKG 264
++ ++ ++ IVYPN G
Sbjct: 240 GAIQELR-ANTKKPIIVYPNSG 260
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 153/311 (49%), Gaps = 26/311 (8%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG+ +++ H D PLWS+ L PE + H D+ R + A +
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQA 74
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA------LIKPSISSQTAA 378
T+ SG + E + + + V RA D+ KP + A
Sbjct: 75 TI-------SGFSTRGIQEQEALELIKKTVLLARRARDDFWKENTQTNRPKPLV----VA 123
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA
Sbjct: 124 SVGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARV 181
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
L LLREFP AWLSFS K++ S G +L+ A + +QI AIG+NC + V
Sbjct: 182 LDTLLREFPATYAWLSFSLKNEKEVSEGMKLVECAR---VFEKSEQIVAIGINCAPVTVV 238
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
+ ++ ++ ++ IVYPN G ++ W E ++ +W + G +IGGC
Sbjct: 239 TGAIQELR-ANTKKPIIVYPNSGETYNPETKTWHGHEQCNALDIQSEEWYQAGARLIGGC 297
Query: 558 CEVTSYEIQQM 568
C T Y I+++
Sbjct: 298 CRTTPYHIEEI 308
>gi|374338104|ref|YP_005094814.1| Homocysteine S-methyltransferase [Streptococcus macedonicus ACA-DC
198]
gi|372284214|emb|CCF02472.1| Homocysteine S-methyltransferase [Streptococcus macedonicus ACA-DC
198]
Length = 315
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 98/266 (36%), Positives = 149/266 (56%), Gaps = 17/266 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + DV G LWS+ YL P + H ++R+GADI+ +S YQA V
Sbjct: 15 ILDGALGTELEKRGY-DVSGK-LWSAKYLLENPSVIQDLHDVYLRSGADILTTSSYQATV 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGP 126
L G SE+EALD++ +V L A+D + + + + L++G +GP
Sbjct: 73 QGLEDFGLSEKEALDIISLTVTLAREARDNFWNGLSDEAKKKRPYPLISG------DVGP 126
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
Y L DGSEY+G+Y T+ + +HRP ++AL+ AG D+L +ETIP EA AL+ L
Sbjct: 127 YAAYLADGSEYNGNY--QQTQEEYQVFHRPRIQALLSAGSDFLGIETIPNVAEAKALLDL 184
Query: 187 L-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
L EFP +A++SF+ +DD H S G I C QI A G+NC P+ +S L+
Sbjct: 185 LATEFPQTEAYISFTAQDDKHISDGTPIEEVADLC--EQSPQILAFGINCSSPAVISGLL 242
Query: 246 RCIKQSHPTVQTIVYPNKGVKLLDGS 271
+ I+ P + YPN G ++ DG+
Sbjct: 243 KRIRTVSPK-PLVTYPNSG-EIYDGA 266
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 148/310 (47%), Gaps = 29/310 (9%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIE---------TA 317
+LDG+ +++ + DV G LWS+ YL P + H ++R + T
Sbjct: 15 ILDGALGTELEKRGY-DVSGK-LWSAKYLLENPSVIQDLHDVYLRSGADILTTSSYQATV 72
Query: 318 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA 377
+ +G ++ + V EA W+ + EA + P IS
Sbjct: 73 QGLEDFGLSEKEALDIISLTVTLAREARDNFWNGLSDEAKKKRPY-------PLIS---- 121
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
+GPY L DGSEY+G+Y T+ + +HRP ++AL+ AG D+L +ETIP EA
Sbjct: 122 GDVGPYAAYLADGSEYNGNY--QQTQEEYQVFHRPRIQALLSAGSDFLGIETIPNVAEAK 179
Query: 438 ALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
AL+ LL EFP +A++SF+ +DD H S G I C QI A G+NC P+
Sbjct: 180 ALLDLLATEFPQTEAYISFTAQDDKHISDGTPIEEVADLC--EQSPQILAFGINCSSPAV 237
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDE-YSILHYVPQWLEEGVNIIG 555
+S L++ I+ P + YPN G ++D W D +++L W + G I+G
Sbjct: 238 ISGLLKRIRTVSPK-PLVTYPNSGEIYDGATQTWKSIPDNSHTLLENSRAWHQLGAKIVG 296
Query: 556 GCCEVTSYEI 565
GCC + +I
Sbjct: 297 GCCRTSPKDI 306
>gi|423112758|ref|ZP_17100449.1| homocysteine S-methyltransferase [Klebsiella oxytoca 10-5245]
gi|376390252|gb|EHT02938.1| homocysteine S-methyltransferase [Klebsiella oxytoca 10-5245]
Length = 310
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 159/322 (49%), Gaps = 17/322 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + K LLDG+ +++ D LWS+ L PE E H
Sbjct: 1 MSQNNPL--TALIDAKPFILLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + EA A +VE +A YLA
Sbjct: 57 DYFRAGAQVAITASYQATP-------AGFAALGLDEAQSKALIGKSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G YV S + + A+HRP VEAL+ AG D LA
Sbjct: 110 NPQAGALLVAGSVGPYGAFLADGSEYRGDYVRS--DEEFQAFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P E AL +LL +P +AW SF+ +D H S G + V +LAN Q+ A+
Sbjct: 168 ETMPNFAEMKALAELLTAYPRARAWFSFTLRDAQHLSDGTPLREVVA--VLANYPQVVAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQW 546
G+NC+ + + + + S + +VYPN G +D+V W E ++ Y+PQW
Sbjct: 226 GINCIALENTTAALAHL-HSLTALPLVVYPNSGEHYDAVSKTWHRHGEACATLAEYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
L G +IGGCC T +I ++
Sbjct: 285 LAAGAKLIGGCCRTTPKDIAEL 306
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 132/256 (51%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L PE E H D+ RAGA + ++ YQA
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHLDYFRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
LG E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAALGLDEAQSKALIGKSVELARKAREAYLAE---------NPQAGALLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV S + + A+HRP VEAL+ AG D LA ET+P E AL +LL
Sbjct: 127 AFLADGSEYRGDYVRS--DEEFQAFHRPRVEALLDAGADLLACETMPNFAEMKALAELLT 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+P +AW SF+ +D H S G + V +LAN Q+ A+G+NC+ + + + +
Sbjct: 185 AYPRARAWFSFTLRDAQHLSDGTPLREVVA--VLANYPQVVALGINCIALENTTAALAHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S + +VYPN G
Sbjct: 243 -HSLTALPLVVYPNSG 257
>gi|229073009|ref|ZP_04206203.1| Homocysteine S-methyltransferase [Bacillus cereus F65185]
gi|229079518|ref|ZP_04212057.1| Homocysteine S-methyltransferase [Bacillus cereus Rock4-2]
gi|228703797|gb|EEL56244.1| Homocysteine S-methyltransferase [Bacillus cereus Rock4-2]
gi|228710127|gb|EEL62107.1| Homocysteine S-methyltransferase [Bacillus cereus F65185]
Length = 308
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 101/259 (38%), Positives = 142/259 (54%), Gaps = 20/259 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ H D PLWS+ L PE + H D+ RAGAD ++ YQA +
Sbjct: 2 LLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQATI 59
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAASIG 125
+ G EQEAL+L+ K+V L A+D KEN N+ L+ AS+G
Sbjct: 60 SGFSARGIQEQEALELIKKTVLLARRARDDFWKEN----TQTNRPKPLVV------ASVG 109
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 110 PYGAYLADGSEYVGNY--GVTDDTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDT 167
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
LLREFP AWLSFS K++ S G+ + + +QI AIG+NC + V+ +
Sbjct: 168 LLREFPETYAWLSFSLKNEKEISEGKKLVECARA--FEKSEQIVAIGINCAPVTVVTGAI 225
Query: 246 RCIKQSHPTVQTIVYPNKG 264
+ ++ ++ IVYPN G
Sbjct: 226 QALR-ANTKKSIIVYPNSG 243
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 150/308 (48%), Gaps = 24/308 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
LLDG+ +++ H D PLWS+ L PE + H D+ R + A + T+
Sbjct: 2 LLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQATI 59
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA------LIKPSISSQTAASI 380
SG + E + + + V RA D+ KP + AS+
Sbjct: 60 -------SGFSARGIQEQEALELIKKTVLLARRARDDFWKENTQTNRPKPLV----VASV 108
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 109 GPYGAYLADGSEYVGNY--GVTDDTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLD 166
Query: 441 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 500
LLREFP AWLSFS K++ S G+ + + +QI AIG+NC + V+
Sbjct: 167 TLLREFPETYAWLSFSLKNEKEISEGKKLVECARA--FEKSEQIVAIGINCAPVTVVTGA 224
Query: 501 VRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEV 560
++ ++ ++ IVYPN G ++ W E ++ +W + G +IGGCC
Sbjct: 225 IQALR-ANTKKSIIVYPNSGETYNPETKTWHGHEQCNTLNIQSEEWYQAGARLIGGCCRT 283
Query: 561 TSYEIQQM 568
T Y I+++
Sbjct: 284 TPYHIEEI 291
>gi|423520411|ref|ZP_17496891.1| hypothetical protein IG7_05480 [Bacillus cereus HuA2-4]
gi|401154110|gb|EJQ61530.1| hypothetical protein IG7_05480 [Bacillus cereus HuA2-4]
Length = 325
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 144/262 (54%), Gaps = 22/262 (8%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ H D PLWS+ L PE + H D+ RAGAD ++ YQA
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAMTASYQA 74
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAAS 123
+ + G EQEAL+L+ K+V L A+D KEN N+ L+ AS
Sbjct: 75 TISGFSARGIQEQEALELIKKTVLLARRARDDFWKEN----TQTNRPKPLVV------AS 124
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 125 VGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVL 182
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
LLREFP AWLSFS K++ S G +L+ A +QI AIG+NC + V+
Sbjct: 183 DTLLREFPETYAWLSFSLKNEKEISEGMKLVECARA---FEKSEQIVAIGINCAPVTVVT 239
Query: 243 TLVRCIKQSHPTVQTIVYPNKG 264
++ ++ ++ IVYPN G
Sbjct: 240 GAIQELR-ANTKKPIIVYPNSG 260
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 152/311 (48%), Gaps = 26/311 (8%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG+ +++ H D PLWS+ L PE + H D+ R + A +
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAMTASYQA 74
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA------LIKPSISSQTAA 378
T+ SG + E + + + V RA D+ KP + A
Sbjct: 75 TI-------SGFSARGIQEQEALELIKKTVLLARRARDDFWKENTQTNRPKPLV----VA 123
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA
Sbjct: 124 SVGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARV 181
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
L LLREFP AWLSFS K++ S G +L+ A +QI AIG+NC + V
Sbjct: 182 LDTLLREFPETYAWLSFSLKNEKEISEGMKLVECARA---FEKSEQIVAIGINCAPVTVV 238
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
+ ++ ++ ++ IVYPN G ++ W E ++ +W + G +IGGC
Sbjct: 239 TGAIQELR-ANTKKPIIVYPNSGETYNPETKTWHGHEQCNALDIQSEEWYQAGARLIGGC 297
Query: 558 CEVTSYEIQQM 568
C T Y I+++
Sbjct: 298 CRTTPYHIEEI 308
>gi|365163146|ref|ZP_09359264.1| hypothetical protein HMPREF1014_04727 [Bacillus sp. 7_6_55CFAA_CT2]
gi|363616819|gb|EHL68244.1| hypothetical protein HMPREF1014_04727 [Bacillus sp. 7_6_55CFAA_CT2]
Length = 325
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 146/262 (55%), Gaps = 22/262 (8%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ H D PLWS+ L PE + H D+ R+GAD ++ YQA
Sbjct: 17 IMLLDGALATELEGHGCNLDD--PLWSARVLLENPELIYQVHSDYFRSGADCAITASYQA 74
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAAS 123
+ + G EQEAL+L+ K+V L A+D KEN I N+ L+ AS
Sbjct: 75 TISGFSARGIQEQEALELIKKTVLLARRARDDFWKEN----IQTNRPKPLVV------AS 124
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 125 VGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVL 182
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
LLREFP AWLSFS K++ S G +L+ A + +QI AIG+NC + V+
Sbjct: 183 DTLLREFPETYAWLSFSLKNEKEISEGMKLVECAR---VFEKSEQIVAIGINCAPVTVVT 239
Query: 243 TLVRCIKQSHPTVQTIVYPNKG 264
++ ++ ++ IVYPN G
Sbjct: 240 GAIQELR-ANTKKPIIVYPNSG 260
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 154/310 (49%), Gaps = 24/310 (7%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG+ +++ H D PLWS+ L PE + H D+ R + A +
Sbjct: 17 IMLLDGALATELEGHGCNLDD--PLWSARVLLENPELIYQVHSDYFRSGADCAITASYQA 74
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-----TAAS 379
T+ SG + E + + + V RA D+ K +I + AS
Sbjct: 75 TI-------SGFSARGIQEQEALELIKKTVLLARRARDDFW---KENIQTNRPKPLVVAS 124
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 125 VGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVL 182
Query: 440 VKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
LLREFP AWLSFS K++ S G +L+ A + +QI AIG+NC + V+
Sbjct: 183 DTLLREFPETYAWLSFSLKNEKEISEGMKLVECAR---VFEKSEQIVAIGINCAPVTVVT 239
Query: 499 TLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
++ ++ ++ IVYPN G ++ W E ++ +W + G +IGGCC
Sbjct: 240 GAIQELR-ANTKKPIIVYPNSGETYNPETKTWHGHEKCNALDILSEEWYQAGARLIGGCC 298
Query: 559 EVTSYEIQQM 568
T Y I+++
Sbjct: 299 RTTPYHIEEI 308
>gi|423393716|ref|ZP_17370941.1| hypothetical protein ICG_05563 [Bacillus cereus BAG1X1-3]
gi|401628860|gb|EJS46690.1| hypothetical protein ICG_05563 [Bacillus cereus BAG1X1-3]
Length = 325
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 144/262 (54%), Gaps = 22/262 (8%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ H D PLWS+ L PE + H D+ RAGAD ++ YQA
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQA 74
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAAS 123
+ + G EQEAL+L+ K+V L A+D KEN N+ L+ AS
Sbjct: 75 TISGFSARGIQEQEALELIKKTVLLARRARDDFWKEN----TQTNRPKPLVV------AS 124
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 125 VGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVL 182
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
LLREFP AWLSFS K++ S G +L+ A +QI AIG+NC + V+
Sbjct: 183 DTLLREFPATYAWLSFSLKNEKEISEGMKLVECARA---FEKSEQIVAIGINCAPVTVVT 239
Query: 243 TLVRCIKQSHPTVQTIVYPNKG 264
++ ++ ++ IVYPN G
Sbjct: 240 GAIQELR-ANTKKPIIVYPNSG 260
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 152/311 (48%), Gaps = 26/311 (8%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG+ +++ H D PLWS+ L PE + H D+ R + A +
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQA 74
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA------LIKPSISSQTAA 378
T+ SG + E + + + V RA D+ KP + A
Sbjct: 75 TI-------SGFSARGIQEQEALELIKKTVLLARRARDDFWKENTQTNRPKPLV----VA 123
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA
Sbjct: 124 SVGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARV 181
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
L LLREFP AWLSFS K++ S G +L+ A +QI AIG+NC + V
Sbjct: 182 LDTLLREFPATYAWLSFSLKNEKEISEGMKLVECARA---FEKSEQIVAIGINCAPVTVV 238
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
+ ++ ++ ++ IVYPN G ++ W E ++ +W + G +IGGC
Sbjct: 239 TGAIQELR-ANTKKPIIVYPNSGETYNPETKTWHGHEQCNALEIQSEEWYQAGARLIGGC 297
Query: 558 CEVTSYEIQQM 568
C T Y I+++
Sbjct: 298 CRTTPYHIEEI 308
>gi|397656224|ref|YP_006496926.1| Homocysteine S-methyltransferase [Klebsiella oxytoca E718]
gi|394344839|gb|AFN30960.1| Homocysteine S-methyltransferase [Klebsiella oxytoca E718]
Length = 310
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 157/322 (48%), Gaps = 17/322 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + K LLDG+ +++ D LWS+ L PE E H
Sbjct: 1 MSQNNPL--TALLDAKPFILLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + EA A +VE +A YLA
Sbjct: 57 DYFRAGAQVAITASYQATP-------AGFAARGLDEAQSKALIGKSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G YV S E A+HRP VEAL+ AG D LA
Sbjct: 110 NPQAGALLVAGSVGPYGAFLADGSEYRGDYVRSREE--FQAFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P E AL +LL +P +AW SF+ +D H S G + V +LAN Q+ A+
Sbjct: 168 ETMPNFAEMKALSELLTAYPRARAWFSFTLRDAQHLSDGTPLREVVA--VLANYPQVVAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQW 546
G+NC+ + + + + S + +VYPN G +D V W + + L Y+PQW
Sbjct: 226 GINCIALENTTAALAHL-HSLTALPLVVYPNSGEHYDPVSKTWHHHGEACATLAEYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
L G +IGGCC T +I ++
Sbjct: 285 LAAGAKLIGGCCRTTPKDIAEL 306
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 130/256 (50%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L PE E H D+ RAGA + ++ YQA
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHLDYFRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSKALIGKSVELARKAREAYLAE---------NPQAGALLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV S E A+HRP VEAL+ AG D LA ET+P E AL +LL
Sbjct: 127 AFLADGSEYRGDYVRSREE--FQAFHRPRVEALLDAGADLLACETMPNFAEMKALSELLT 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+P +AW SF+ +D H S G + V +LAN Q+ A+G+NC+ + + + +
Sbjct: 185 AYPRARAWFSFTLRDAQHLSDGTPLREVVA--VLANYPQVVALGINCIALENTTAALAHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S + +VYPN G
Sbjct: 243 -HSLTALPLVVYPNSG 257
>gi|423106875|ref|ZP_17094570.1| homocysteine S-methyltransferase [Klebsiella oxytoca 10-5243]
gi|376389001|gb|EHT01693.1| homocysteine S-methyltransferase [Klebsiella oxytoca 10-5243]
Length = 310
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 159/322 (49%), Gaps = 17/322 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + K LLDG+ +++ D LWS+ L PE E H
Sbjct: 1 MSQNNPL--TALLDAKPFILLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + EA A +VE +A YLA
Sbjct: 57 DYFRAGAQVAITASYQATP-------AGFAALGLDEAQSKALIGKSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G YV S + + A+HRP VEAL+ AG D LA
Sbjct: 110 NPQAGALLVAGSVGPYGAFLADGSEYRGDYVRS--DEEFQAFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P E AL +LL +P +AW SF+ +D H S G + V +LAN Q+ A+
Sbjct: 168 ETMPNFAEMKALAELLTAYPRARAWFSFTLRDAQHLSDGTPLREVVG--VLANYPQVVAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQW 546
G+NC+ + + + + S + +VYPN G +D+V W E ++ Y+PQW
Sbjct: 226 GINCIALENTTAALAHL-HSLTVLPLVVYPNSGEHYDAVSKTWHRHGEACATLAEYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
L G +IGGCC T +I ++
Sbjct: 285 LAAGAKLIGGCCRTTPKDIAEL 306
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 132/256 (51%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L PE E H D+ RAGA + ++ YQA
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHLDYFRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
LG E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAALGLDEAQSKALIGKSVELARKAREAYLAE---------NPQAGALLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV S + + A+HRP VEAL+ AG D LA ET+P E AL +LL
Sbjct: 127 AFLADGSEYRGDYVRS--DEEFQAFHRPRVEALLDAGADLLACETMPNFAEMKALAELLT 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+P +AW SF+ +D H S G + V +LAN Q+ A+G+NC+ + + + +
Sbjct: 185 AYPRARAWFSFTLRDAQHLSDGTPLREVVG--VLANYPQVVALGINCIALENTTAALAHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S + +VYPN G
Sbjct: 243 -HSLTVLPLVVYPNSG 257
>gi|163848631|ref|YP_001636675.1| homocysteine methyltransferase [Chloroflexus aurantiacus J-10-fl]
gi|163669920|gb|ABY36286.1| homocysteine S-methyltransferase [Chloroflexus aurantiacus J-10-fl]
Length = 322
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 139/256 (54%), Gaps = 13/256 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R D PLWS+ L P H D+ AGAD+ ++ YQA +
Sbjct: 21 ILDGALATELERRGCDLAD--PLWSAKVLIENPSLIQAVHADYFAAGADVAITASYQATI 78
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G + +A+ LL +SV L +A+D+ P + L+ AAS+GPYG
Sbjct: 79 PGFMARGIAPDQAILLLQRSVALAQAARDQFWADPANREGRLRPLV------AASVGPYG 132
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G+Y ++ A+LI +HRP + AL A D A ETIP EA ALV LL
Sbjct: 133 AFLHDGSEYRGNY--GLSVAELIEFHRPRMAALAAARPDLFACETIPCLDEARALVALLP 190
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP AW+SFS +D HT+ GE I+ + A+P Q+ AIGVNC P + L+R +
Sbjct: 191 EFPHLTAWISFSARDGAHTAQGEPIAECAAE-IAAHP-QVAAIGVNCTAPRFLPDLIRAV 248
Query: 249 KQSHPTVQTIVYPNKG 264
Q+ +VYPN G
Sbjct: 249 -QAVTDKPIVVYPNSG 263
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 111/323 (34%), Positives = 155/323 (47%), Gaps = 19/323 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+K S P T + + +LDG+ +++ R D PLWS+ L P H
Sbjct: 2 LKMSSPNPITAALAQRPLLILDGALATELERRGCDLAD--PLWSAKVLIENPSLIQAVHA 59
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL-- 365
D+ + A + T+ G + I + +V AL +A D
Sbjct: 60 DYFAAGADVAITASYQATI-------PGFMARGIAPDQAILLLQRSV-ALAQAARDQFWA 111
Query: 366 --ALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 423
A + + AAS+GPYG L DGSEY G+Y ++ A+LI +HRP + AL A D
Sbjct: 112 DPANREGRLRPLVAASVGPYGAFLHDGSEYRGNY--GLSVAELIEFHRPRMAALAAARPD 169
Query: 424 YLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQ 483
A ETIP EA ALV LL EFP AW+SFS +D HT+ GE I+ + A+P Q
Sbjct: 170 LFACETIPCLDEARALVALLPEFPHLTAWISFSARDGAHTAQGEPIAECAAE-IAAHP-Q 227
Query: 484 IQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYV 543
+ AIGVNC P + L+R + Q+ +VYPN G V+D V W+ T + +
Sbjct: 228 VAAIGVNCTAPRFLPDLIRAV-QAVTDKPIVVYPNSGEVYDPVGQCWIGTTEIDDFVAQA 286
Query: 544 PQWLEEGVNIIGGCCEVTSYEIQ 566
QW G +IGGCC T I+
Sbjct: 287 RQWYAMGARLIGGCCRTTPDHIR 309
>gi|222526567|ref|YP_002571038.1| homocysteine methyltransferase [Chloroflexus sp. Y-400-fl]
gi|222450446|gb|ACM54712.1| homocysteine S-methyltransferase [Chloroflexus sp. Y-400-fl]
Length = 319
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 139/256 (54%), Gaps = 13/256 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R D PLWS+ L P H D+ AGAD+ ++ YQA +
Sbjct: 18 ILDGALATELERRGCDLAD--PLWSAKVLIENPSLIQAVHADYFAAGADVAITASYQATI 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G + +A+ LL +SV L +A+D+ P + L+ AAS+GPYG
Sbjct: 76 PGFMARGIAPDQAILLLQRSVALAQAARDQFWADPANREGRLRPLV------AASVGPYG 129
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G+Y ++ A+LI +HRP + AL A D A ETIP EA ALV LL
Sbjct: 130 AFLHDGSEYRGNY--GLSVAELIEFHRPRMAALAAARPDLFACETIPCLDEARALVALLP 187
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP AW+SFS +D HT+ GE I+ + A+P Q+ AIGVNC P + L+R +
Sbjct: 188 EFPHLTAWISFSARDGAHTAQGEPIAECAAE-IAAHP-QVAAIGVNCTAPRFLPDLIRAV 245
Query: 249 KQSHPTVQTIVYPNKG 264
Q+ +VYPN G
Sbjct: 246 -QAVTDKPIVVYPNSG 260
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 153/320 (47%), Gaps = 19/320 (5%)
Query: 251 SHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFI 310
S P T + + +LDG+ +++ R D PLWS+ L P H D+
Sbjct: 2 SSPNPITAALAQRPLLILDGALATELERRGCDLAD--PLWSAKVLIENPSLIQAVHADYF 59
Query: 311 RGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL----A 366
+ A + T+ G + I + +V AL +A D A
Sbjct: 60 AAGADVAITASYQATI-------PGFMARGIAPDQAILLLQRSV-ALAQAARDQFWADPA 111
Query: 367 LIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 426
+ + AAS+GPYG L DGSEY G+Y ++ A+LI +HRP + AL A D A
Sbjct: 112 NREGRLRPLVAASVGPYGAFLHDGSEYRGNY--GLSVAELIEFHRPRMAALAAARPDLFA 169
Query: 427 LETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQA 486
ETIP EA ALV LL EFP AW+SFS +D HT+ GE I+ + A+P Q+ A
Sbjct: 170 CETIPCLDEARALVALLPEFPHLTAWISFSARDGAHTAQGEPIAECAAE-IAAHP-QVAA 227
Query: 487 IGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQW 546
IGVNC P + L+R + Q+ +VYPN G V+D V W+ T + + QW
Sbjct: 228 IGVNCTAPRFLPDLIRAV-QAVTDKPIVVYPNSGEVYDPVGQCWIGTTEIDDFVAQARQW 286
Query: 547 LEEGVNIIGGCCEVTSYEIQ 566
G +IGGCC T I+
Sbjct: 287 YAMGARLIGGCCRTTPDHIR 306
>gi|377577516|ref|ZP_09806498.1| homocysteine S-methyltransferase [Escherichia hermannii NBRC
105704]
gi|377541254|dbj|GAB51663.1| homocysteine S-methyltransferase [Escherichia hermannii NBRC
105704]
Length = 311
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 149/302 (49%), Gaps = 19/302 (6%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D LWS+ L PE+ + H D+ R + A + T
Sbjct: 18 VLDGALATELEARGCDLND--TLWSAKVLLENPESVYQVHLDYFRAGAQCAVTASYQATP 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+G M EA A + +VE RA D+LA S + A S+GPYG
Sbjct: 76 -------AGFAARGMNEAQATALIKQSVELAQRARTDFLAERPDSGALLIAGSVGPYGAY 128
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y ++++A +HRP + ALV AGVD LA ET+P+ E ALV LL E
Sbjct: 129 LADGSEYRGDY--TLSQAAYCDFHRPRMAALVEAGVDLLACETLPSFAETRALVALLAEC 186
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P AW SF+ D H S G + V LL DQ+ AIGVNC+ P + ++ +
Sbjct: 187 PDTTAWFSFTLHDSHHLSDGTPLEDVVA--LLDGHDQVLAIGVNCIAPEQATAALQTL-H 243
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWL---DTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
T+ +VYPN G +D+ W T D S+ Y+ WL G +IGGCC T
Sbjct: 244 GMTTLPLVVYPNSGETYDAQTKCWTAGGQTCD--SLDGYLDDWLCAGARLIGGCCRTTPA 301
Query: 564 EI 565
+I
Sbjct: 302 DI 303
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 134/257 (52%), Gaps = 18/257 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE+ + H D+ RAGA ++ YQA
Sbjct: 18 VLDGALATELEARGCDLND--TLWSAKVLLENPESVYQVHLDYFRAGAQCAVTASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASIGPY 127
G +E +A L+ +SV+L A+ D + PD +G + A S+GPY
Sbjct: 76 AGFAARGMNEAQATALIKQSVELAQRARTDFLAERPD----------SGALLIAGSVGPY 125
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y ++++A +HRP + ALV AGVD LA ET+P+ E ALV LL
Sbjct: 126 GAYLADGSEYRGDY--TLSQAAYCDFHRPRMAALVEAGVDLLACETLPSFAETRALVALL 183
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
E P AW SF+ D H S G + V LL DQ+ AIGVNC+ P + ++
Sbjct: 184 AECPDTTAWFSFTLHDSHHLSDGTPLEDVVA--LLDGHDQVLAIGVNCIAPEQATAALQT 241
Query: 248 IKQSHPTVQTIVYPNKG 264
+ T+ +VYPN G
Sbjct: 242 L-HGMTTLPLVVYPNSG 257
>gi|443634479|ref|ZP_21118653.1| MmuM [Bacillus subtilis subsp. inaquosorum KCTC 13429]
gi|443345715|gb|ELS59778.1| MmuM [Bacillus subtilis subsp. inaquosorum KCTC 13429]
Length = 315
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/256 (37%), Positives = 141/256 (55%), Gaps = 13/256 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R D LWS+ L EP + H D+ AGAD ++ YQ+
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILLEEPNLIKQVHTDYFAAGADCAITASYQSTF 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G SE EA L+ SV + A+D+ + LN+ ++ AAS+GPYG
Sbjct: 73 EGFAARGLSEAEARRLIEMSVTIAAEARDEFWAVGENRLNRPKPII------AASVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G+Y ++E +L+ +HRP ++AL+ AG D LA ETIP EA A+V++L+
Sbjct: 127 AYLADGSEYRGNY--GISEDELVEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRVLK 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP W+SFS KD H S G +A + L QI A+G+NC H+ +L+ +
Sbjct: 185 EFPETYTWISFSAKDGLHISDG--TPAADCASWLDEHRQIAALGINCTPLQHIPSLIEEL 242
Query: 249 KQSHPTVQTIVYPNKG 264
K+ + IVYPN G
Sbjct: 243 KK-QTSKPIIVYPNSG 257
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 150/305 (49%), Gaps = 17/305 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ R D LWS+ L EP + H D+ + A + T
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILLEEPNLIKQVHTDYFAAGADCAITASYQST- 71
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT---AASIGPY 383
+ G ++EA+ +V A ++ A+ + ++ AAS+GPY
Sbjct: 72 ------FEGFAARGLSEAEARRLIEMSVTIAAEARDEFWAVGENRLNRPKPIIAASVGPY 125
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L DGSEY G+Y ++E +L+ +HRP ++AL+ AG D LA ETIP EA A+V++L
Sbjct: 126 GAYLADGSEYRGNY--GISEDELVEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRVL 183
Query: 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
+EFP W+SFS KD H S G +A + L QI A+G+NC H+ +L+
Sbjct: 184 KEFPETYTWISFSAKDGLHISDG--TPAADCASWLDEHRQIAALGINCTPLQHIPSLIEE 241
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
+K+ + IVYPN G +D W W E+G +IGGCC
Sbjct: 242 LKK-QTSKPIIVYPNSGEQYDPETKTWNGAACAEPYGTSASTWHEKGAKLIGGCCRTKPE 300
Query: 564 EIQQM 568
+IQ++
Sbjct: 301 DIQEI 305
>gi|423510471|ref|ZP_17487002.1| hypothetical protein IG3_01968 [Bacillus cereus HuA2-1]
gi|423514854|ref|ZP_17491359.1| hypothetical protein IG3_06325 [Bacillus cereus HuA2-1]
gi|402441366|gb|EJV73322.1| hypothetical protein IG3_06325 [Bacillus cereus HuA2-1]
gi|402453978|gb|EJV85775.1| hypothetical protein IG3_01968 [Bacillus cereus HuA2-1]
Length = 325
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 144/262 (54%), Gaps = 22/262 (8%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ H D PLWS+ L PE + H D+ RAGAD ++ YQA
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQA 74
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAAS 123
+ + G EQEAL+L+ K+V L A+D KEN N+ L+ AS
Sbjct: 75 TISGFSARGIQEQEALELIKKTVLLARKARDDFWKEN----TQTNRPKPLVV------AS 124
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 125 VGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVL 182
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
LLREFP AWLSFS K++ G +L+ A + +QI AIG+NC + V+
Sbjct: 183 DTLLREFPATYAWLSFSLKNEKEVGEGMKLVECAR---VFEKSEQIVAIGINCAPVTVVT 239
Query: 243 TLVRCIKQSHPTVQTIVYPNKG 264
++ ++ ++ IVYPN G
Sbjct: 240 GAIQELR-ANTKKPIIVYPNSG 260
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 152/311 (48%), Gaps = 26/311 (8%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG+ +++ H D PLWS+ L PE + H D+ R + A +
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQA 74
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA------LIKPSISSQTAA 378
T+ SG + E + + + V +A D+ KP + A
Sbjct: 75 TI-------SGFSARGIQEQEALELIKKTVLLARKARDDFWKENTQTNRPKPLV----VA 123
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA
Sbjct: 124 SVGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARV 181
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
L LLREFP AWLSFS K++ G +L+ A + +QI AIG+NC + V
Sbjct: 182 LDTLLREFPATYAWLSFSLKNEKEVGEGMKLVECAR---VFEKSEQIVAIGINCAPVTVV 238
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
+ ++ ++ ++ IVYPN G ++ W E ++ +W + G +IGGC
Sbjct: 239 TGAIQELR-ANTKKPIIVYPNSGETYNPETKTWHGHEQCNALDIQSEEWYQAGARLIGGC 297
Query: 558 CEVTSYEIQQM 568
C T Y I+++
Sbjct: 298 CRTTPYHIEEI 308
>gi|423525136|ref|ZP_17501609.1| hypothetical protein IGC_04519 [Bacillus cereus HuA4-10]
gi|423525358|ref|ZP_17501830.1| hypothetical protein IGC_04740 [Bacillus cereus HuA4-10]
gi|401167451|gb|EJQ74733.1| hypothetical protein IGC_04740 [Bacillus cereus HuA4-10]
gi|401168607|gb|EJQ75868.1| hypothetical protein IGC_04519 [Bacillus cereus HuA4-10]
Length = 325
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 144/262 (54%), Gaps = 22/262 (8%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ H D PLWS+ L PE + H D+ RAGAD ++ YQA
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARMLLENPELIYQVHSDYFRAGADCAITASYQA 74
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAAS 123
+ + G EQEAL+L+ K+V L A+D KEN N+ L+ AS
Sbjct: 75 TISGFSARGIQEQEALELIKKTVLLARRARDDFWKEN----TQTNRPKPLVV------AS 124
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 125 VGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVL 182
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
LLREFP AWLSFS K++ S G +L+ A +QI AIG+NC + V+
Sbjct: 183 DTLLREFPETYAWLSFSLKNEKEISEGMKLVECARA---FEKSEQIVAIGINCAPVTVVT 239
Query: 243 TLVRCIKQSHPTVQTIVYPNKG 264
++ ++ ++ IVYPN G
Sbjct: 240 GAIQELR-ANTKKPIIVYPNSG 260
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 152/311 (48%), Gaps = 26/311 (8%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG+ +++ H D PLWS+ L PE + H D+ R + A +
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARMLLENPELIYQVHSDYFRAGADCAITASYQA 74
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA------LIKPSISSQTAA 378
T+ SG + E + + + V RA D+ KP + A
Sbjct: 75 TI-------SGFSARGIQEQEALELIKKTVLLARRARDDFWKENTQTNRPKPLV----VA 123
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA
Sbjct: 124 SVGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARV 181
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
L LLREFP AWLSFS K++ S G +L+ A +QI AIG+NC + V
Sbjct: 182 LDTLLREFPETYAWLSFSLKNEKEISEGMKLVECARA---FEKSEQIVAIGINCAPVTVV 238
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
+ ++ ++ ++ IVYPN G ++ W E ++ +W + G +IGGC
Sbjct: 239 TGAIQELR-ANTKKPIIVYPNSGETYNPESKTWHGHEQCNALDIQSEEWYQAGARLIGGC 297
Query: 558 CEVTSYEIQQM 568
C T Y I+++
Sbjct: 298 CRTTPYHIEEI 308
>gi|75760225|ref|ZP_00740280.1| Homocysteine S-methyltransferase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74492278|gb|EAO55439.1| Homocysteine S-methyltransferase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 325
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 145/262 (55%), Gaps = 22/262 (8%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ H D PLWS+ L PE + H D+ RAGAD ++ YQA
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQA 74
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAAS 123
+ + G EQEAL+L+ K+V L A+D KEN N+ L+ AS
Sbjct: 75 TISGFSTRGIQEQEALELIKKTVLLARRARDDFWKEN----TQTNRPKPLVV------AS 124
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 125 VGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVL 182
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
LLREFP AWLSFS K++ S G +L+ A + +QI AIG+NC + V+
Sbjct: 183 DTLLREFPETYAWLSFSLKNEKEISEGMKLVECAR---VFEKSEQIVAIGINCAPVTVVT 239
Query: 243 TLVRCIKQSHPTVQTIVYPNKG 264
++ ++ ++ IVYPN G
Sbjct: 240 GAIQELR-ANTKKPIIVYPNSG 260
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 155/317 (48%), Gaps = 26/317 (8%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
+ + + LLDG+ +++ H D PLWS+ L PE + H D+ R + A
Sbjct: 11 ILSQQSIMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAI 68
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA------LIKPSI 372
+ T+ SG + E + + + V RA D+ KP +
Sbjct: 69 TASYQATI-------SGFSTRGIQEQEALELIKKTVLLARRARDDFWKENTQTNRPKPLV 121
Query: 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA 432
AS+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+
Sbjct: 122 ----VASVGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPS 175
Query: 433 EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNC 491
+EA L LLREFP AWLSFS K++ S G +L+ A + +QI AIG+NC
Sbjct: 176 LQEARVLDTLLREFPETYAWLSFSLKNEKEISEGMKLVECAR---VFEKSEQIVAIGINC 232
Query: 492 VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGV 551
+ V+ ++ ++ ++ IVYPN G ++ W E ++ +W + G
Sbjct: 233 APVTVVTGAIQELR-ANTKKPIIVYPNSGETYNPETKTWHGHEQCNALNIQSEEWYQAGA 291
Query: 552 NIIGGCCEVTSYEIQQM 568
+IGGCC T Y I+++
Sbjct: 292 RLIGGCCRTTPYHIEEI 308
>gi|374709133|ref|ZP_09713567.1| homocysteine methyltransferase [Sporolactobacillus inulinus CASD]
Length = 315
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 156/306 (50%), Gaps = 17/306 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ +H I +D LWS+ + PE + H D+ ++GADI ++ YQA +
Sbjct: 17 ILDGAMATEIEKHGIA-LDSE-LWSAAVIQEHPEVVKQVHLDYFKSGADIATTNTYQATL 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGP 126
+ GYSEQEA ++ K+VQL A+ + + +P ++ + L+ G S+GP
Sbjct: 75 LGFQQSGYSEQEAERIISKTVQLAADARAEFWASLSPQQQASRPYPLIAG------SVGP 128
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEYSG Y ++ E +H+ ++ L +AG+D A ET+P EA AL KL
Sbjct: 129 YGAYLADGSEYSGDY--TLNEGGYRMFHQSRMQLLKKAGIDLFAFETMPNFAEAQALAKL 186
Query: 187 LRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
L + FP +AWLSFS KD H G ++ A + + DQI AIGVNC + +
Sbjct: 187 LNDAFPEDEAWLSFSLKDPEHLCDGTPLAEA--AAFFNDNDQIAAIGVNCFSMMKIDQAI 244
Query: 246 RCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVET 305
I+ S +VYPN G K S+H D W+ T C T
Sbjct: 245 PVIR-SATRKPIVVYPNSGEKYHPIKKIWISSKHRPSFFDASKTWAKAGATL-IGGCCRT 302
Query: 306 HRDFIR 311
D IR
Sbjct: 303 SPDDIR 308
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 162/333 (48%), Gaps = 32/333 (9%)
Query: 242 STLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEA 301
+ L + +KQ +P + LDG+ +++ +H I +D LWS+ + PE
Sbjct: 4 TKLSKLLKQYNPII------------LDGAMATEIEKHGIA-LDSE-LWSAAVIQEHPEV 49
Query: 302 CVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG 361
+ H D+ + + A + T+L G + SG+ S EA+ I + A RA
Sbjct: 50 VKQVHLDYFKSGADIATTNTYQATLL--GFQQSGY---SEQEAERIISKTVQLAADARA- 103
Query: 362 VDYLALIKPSISSQ-----TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA 416
++ A + P + A S+GPYG L DGSEYSG Y ++ E +H+ ++
Sbjct: 104 -EFWASLSPQQQASRPYPLIAGSVGPYGAYLADGSEYSGDY--TLNEGGYRMFHQSRMQL 160
Query: 417 LVRAGVDYLALETIPAEKEALALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTS 475
L +AG+D A ET+P EA AL KLL + FP +AWLSFS KD H G ++ A +
Sbjct: 161 LKKAGIDLFAFETMPNFAEAQALAKLLNDAFPEDEAWLSFSLKDPEHLCDGTPLAEA--A 218
Query: 476 CLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTED 535
+ DQI AIGVNC + + I+ S +VYPN G + + W+ ++
Sbjct: 219 AFFNDNDQIAAIGVNCFSMMKIDQAIPVIR-SATRKPIVVYPNSGEKYHPIKKIWISSKH 277
Query: 536 EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
S W + G +IGGCC + +I+++
Sbjct: 278 RPSFFDASKTWAKAGATLIGGCCRTSPDDIREI 310
>gi|423369559|ref|ZP_17346989.1| hypothetical protein IC3_04658 [Bacillus cereus VD142]
gi|401076901|gb|EJP85247.1| hypothetical protein IC3_04658 [Bacillus cereus VD142]
Length = 325
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 143/262 (54%), Gaps = 22/262 (8%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ H D PLWS+ L PE + H D+ RAGAD ++ YQA
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQA 74
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAAS 123
+ + G EQEAL+L+ K+V L A+D KEN N +K AS
Sbjct: 75 TISGFSARGIQEQEALELIKKTVLLARRARDDFWKENT--QTNRHKPL--------VVAS 124
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 125 VGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVL 182
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
LLREFP AWLSFS K++ S G +L+ A +QI AIG+NC + V+
Sbjct: 183 DTLLREFPETYAWLSFSLKNEKEISEGMKLVECARA---FEKSEQIVAIGINCAPVTVVT 239
Query: 243 TLVRCIKQSHPTVQTIVYPNKG 264
++ ++ ++ IVYPN G
Sbjct: 240 GAIQELR-ANTKKPIIVYPNSG 260
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 152/307 (49%), Gaps = 18/307 (5%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG+ +++ H D PLWS+ L PE + H D+ R + A +
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQA 74
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--TAASIGP 382
T+ SG + E + + + V RA D+ + + AS+GP
Sbjct: 75 TI-------SGFSARGIQEQEALELIKKTVLLARRARDDFWKENTQTNRHKPLVVASVGP 127
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L L
Sbjct: 128 YGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDTL 185
Query: 443 LREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
LREFP AWLSFS K++ S G +L+ A +QI AIG+NC + V+ +
Sbjct: 186 LREFPETYAWLSFSLKNEKEISEGMKLVECARA---FEKSEQIVAIGINCAPVTVVTGAI 242
Query: 502 RCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVT 561
+ ++ ++ IVYPN G ++ W D E ++ +W + G +IGGCC T
Sbjct: 243 QELR-ANTKKPIIVYPNSGETYNPETKTWHDHEQCNALDIQSEEWYQAGARLIGGCCRTT 301
Query: 562 SYEIQQM 568
Y I+++
Sbjct: 302 PYHIEEI 308
>gi|423595907|ref|ZP_17571936.1| hypothetical protein IIG_04773 [Bacillus cereus VD048]
gi|401221121|gb|EJR27746.1| hypothetical protein IIG_04773 [Bacillus cereus VD048]
Length = 325
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 144/262 (54%), Gaps = 22/262 (8%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ H D PLWS+ L PE + H D+ RAGAD ++ YQA
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQA 74
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAAS 123
+ + G EQEAL+L+ K+V L A+D KEN N+ L+ AS
Sbjct: 75 TISGFSARGIQEQEALELIKKTVLLARRARDDFWKEN----TQTNRPKPLVV------AS 124
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 125 VGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVL 182
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
LLREFP AWLSFS K++ S G +L+ A +QI AIG+NC + V+
Sbjct: 183 DTLLREFPETYAWLSFSLKNEKEISEGMKLVECARA---FEKSEQIVAIGINCAPVTVVT 239
Query: 243 TLVRCIKQSHPTVQTIVYPNKG 264
++ ++ ++ IVYPN G
Sbjct: 240 GAIQELR-ANTKKPIIVYPNSG 260
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 152/311 (48%), Gaps = 26/311 (8%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG+ +++ H D PLWS+ L PE + H D+ R + A +
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQA 74
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA------LIKPSISSQTAA 378
T+ SG + E + + + V RA D+ KP + A
Sbjct: 75 TI-------SGFSARGIQEQEALELIKKTVLLARRARDDFWKENTQTNRPKPLV----VA 123
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA
Sbjct: 124 SVGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARV 181
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
L LLREFP AWLSFS K++ S G +L+ A +QI AIG+NC + V
Sbjct: 182 LDTLLREFPETYAWLSFSLKNEKEISEGMKLVECARA---FEKSEQIVAIGINCAPVTVV 238
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
+ ++ ++ ++ IVYPN G ++ W E ++ +W + G +IGGC
Sbjct: 239 TGAIQELR-ANTKKPIIVYPNSGETYNPESKTWHGHEQCNALDIQSEEWYQAGARLIGGC 297
Query: 558 CEVTSYEIQQM 568
C T Y I+++
Sbjct: 298 CRTTPYHIEEI 308
>gi|375259245|ref|YP_005018415.1| homocysteine methyltransferase [Klebsiella oxytoca KCTC 1686]
gi|365908723|gb|AEX04176.1| homocysteine methyltransferase [Klebsiella oxytoca KCTC 1686]
Length = 310
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 157/322 (48%), Gaps = 17/322 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + K LLDG+ +++ D LWS+ L PE E H
Sbjct: 1 MSQNNPL--TALLDAKPFILLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + EA A +VE +A YLA
Sbjct: 57 DYFRAGAQVAITASYQATP-------AGFAARGLDEAQSKALIGKSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G YV S E A+HRP VEAL+ AG D LA
Sbjct: 110 NPQAGALLVAGSVGPYGAFLADGSEYRGDYVRSREE--FQAFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P E AL +LL +P +AW SF+ +D H S G + + +LAN Q+ A+
Sbjct: 168 ETMPNFAEMKALAELLTAYPRARAWFSFTLRDAQHLSDGTPLREVIG--VLANYPQVVAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILH-YVPQW 546
G+NC+ + + + + S + +VYPN G +D V W + + L Y+PQW
Sbjct: 226 GINCIALENTTAALAHL-HSLTALPLVVYPNSGEHYDPVSKTWHHHGEACATLAGYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
L G +IGGCC T +I ++
Sbjct: 285 LAAGAKLIGGCCRTTPKDIAEL 306
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 130/256 (50%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L PE E H D+ RAGA + ++ YQA
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHLDYFRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSKALIGKSVELARKAREAYLAE---------NPQAGALLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV S E A+HRP VEAL+ AG D LA ET+P E AL +LL
Sbjct: 127 AFLADGSEYRGDYVRSREE--FQAFHRPRVEALLDAGADLLACETMPNFAEMKALAELLT 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+P +AW SF+ +D H S G + + +LAN Q+ A+G+NC+ + + + +
Sbjct: 185 AYPRARAWFSFTLRDAQHLSDGTPLREVIG--VLANYPQVVALGINCIALENTTAALAHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S + +VYPN G
Sbjct: 243 -HSLTALPLVVYPNSG 257
>gi|384173890|ref|YP_005555275.1| homocysteine S-methyltransferase [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|349593114|gb|AEP89301.1| homocysteine S-methyltransferase [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
Length = 296
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/234 (40%), Positives = 133/234 (56%), Gaps = 11/234 (4%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQ 90
LWS+ L EP + H D+ AGAD ++ YQ+ + G SE EA L+ SV
Sbjct: 16 LWSAKILMEEPNLIKQVHTDYFAAGADCAITASYQSTFEGFAARGLSEAEARRLIELSVS 75
Query: 91 LMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADL 150
+ A+D+ + LN+ ++ AAS+GPYG L DGSEY G+Y ++E +L
Sbjct: 76 IAAEARDEFWSLEENRLNRPKPII------AASVGPYGAYLADGSEYRGNY--GISEDEL 127
Query: 151 IAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG 210
I +HRP ++AL+ AG D LA ETIP EA A+V+LL+EFP AW+SFS KD H S G
Sbjct: 128 IEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLKEFPETYAWISFSAKDGLHISDG 187
Query: 211 ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+A + L QI A+G+NC H+ +L+ +K+ + + IVYPN G
Sbjct: 188 --TPAADCASWLDEHRQIAALGINCTPLQHIPSLIEELKK-NTSKPIIVYPNSG 238
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 143/283 (50%), Gaps = 15/283 (5%)
Query: 289 LWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA 348
LWS+ L EP + H D+ + A + T + G ++EA+
Sbjct: 16 LWSAKILMEEPNLIKQVHTDYFAAGADCAITASYQST-------FEGFAARGLSEAEARR 68
Query: 349 WHRPNVEALVRAGVDYLALIKPSISSQT---AASIGPYGTVLRDGSEYSGHYVDSMTEAD 405
+V A ++ +L + ++ AAS+GPYG L DGSEY G+Y ++E +
Sbjct: 69 LIELSVSIAAEARDEFWSLEENRLNRPKPIIAASVGPYGAYLADGSEYRGNY--GISEDE 126
Query: 406 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSH 465
LI +HRP ++AL+ AG D LA ETIP EA A+V+LL+EFP AW+SFS KD H S
Sbjct: 127 LIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLKEFPETYAWISFSAKDGLHISD 186
Query: 466 GELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDS 525
G +A + L QI A+G+NC H+ +L+ +K+ + + IVYPN G +D
Sbjct: 187 G--TPAADCASWLDEHRQIAALGINCTPLQHIPSLIEELKK-NTSKPIIVYPNSGEQYDP 243
Query: 526 VHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
W S W E+G +IGGCC +IQ++
Sbjct: 244 ETKTWNGAACAESYGASARTWHEKGARLIGGCCRTKPEDIQEI 286
>gi|423438994|ref|ZP_17415953.1| hypothetical protein IE9_05153 [Bacillus cereus BAG4X12-1]
gi|423439191|ref|ZP_17416137.1| hypothetical protein IE9_05337 [Bacillus cereus BAG4X12-1]
gi|401114424|gb|EJQ22285.1| hypothetical protein IE9_05337 [Bacillus cereus BAG4X12-1]
gi|401115008|gb|EJQ22865.1| hypothetical protein IE9_05153 [Bacillus cereus BAG4X12-1]
Length = 325
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 144/262 (54%), Gaps = 22/262 (8%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ H D PLWS+ L PE + H D+ RAGAD ++ YQA
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLDNPELIYQVHSDYFRAGADCAITASYQA 74
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAAS 123
+ + G EQEAL+L+ K+V L A+D KEN N+ L+ AS
Sbjct: 75 TISGFSARGIQEQEALELIKKTVLLARRARDDFWKEN----TQTNRPKPLVV------AS 124
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 125 VGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVL 182
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
LLREFP AWLSFS K++ S G +L+ A +QI AIG+NC + V+
Sbjct: 183 DTLLREFPETYAWLSFSLKNEKEISEGMKLVECARA---FEKSEQIVAIGINCAPVAVVT 239
Query: 243 TLVRCIKQSHPTVQTIVYPNKG 264
++ ++ ++ IVYPN G
Sbjct: 240 GAIQELR-ANTKKPIIVYPNSG 260
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 152/311 (48%), Gaps = 26/311 (8%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG+ +++ H D PLWS+ L PE + H D+ R + A +
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLDNPELIYQVHSDYFRAGADCAITASYQA 74
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA------LIKPSISSQTAA 378
T+ SG + E + + + V RA D+ KP + A
Sbjct: 75 TI-------SGFSARGIQEQEALELIKKTVLLARRARDDFWKENTQTNRPKPLV----VA 123
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA
Sbjct: 124 SVGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARV 181
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
L LLREFP AWLSFS K++ S G +L+ A +QI AIG+NC + V
Sbjct: 182 LDTLLREFPETYAWLSFSLKNEKEISEGMKLVECARA---FEKSEQIVAIGINCAPVAVV 238
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
+ ++ ++ ++ IVYPN G ++ W E ++ +W + G +IGGC
Sbjct: 239 TGAIQELR-ANTKKPIIVYPNSGETYNPETKTWHGHEQCNALNIQCEEWYQAGARLIGGC 297
Query: 558 CEVTSYEIQQM 568
C T Y I+++
Sbjct: 298 CRTTPYHIEEI 308
>gi|419960235|ref|ZP_14476278.1| homocysteine methyltransferase [Enterobacter cloacae subsp. cloacae
GS1]
gi|388604824|gb|EIM34051.1| homocysteine methyltransferase [Enterobacter cloacae subsp. cloacae
GS1]
Length = 310
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 161/324 (49%), Gaps = 17/324 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + N+ +LDG+ +++ D LWS+ L PE + H
Sbjct: 1 MSQNNPL--TALLENQPFVVLDGAMATELEARGCNLADS--LWSAKVLMENPELIRDVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + E+ A +VE +A YLA
Sbjct: 57 DYYRAGAQVAITASYQATP-------AGFAARGLDESQSRALIGKSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G YV S E A+HRP VEAL+ AG D LA
Sbjct: 110 NANAGTLLVAGSVGPYGAYLADGSEYRGDYVRSAEE--FTAFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P+ E AL LL FP +AW SF+ +D H S G + V++ L N Q+ A+
Sbjct: 168 ETLPSFTEIKALAALLTAFPRARAWFSFTLRDSEHLSDGTPLRDVVSA--LENYPQVVAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQW 546
G+NC+ + ++ + + S ++ +VYPN G +D+V W E ++ Y+PQW
Sbjct: 226 GINCIALENTTSALTHL-HSLTSLPLVVYPNSGEHYDAVSKTWHHHGEACETLAGYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQMRI 570
L G +IGGCC T +I + +
Sbjct: 285 LAAGAKLIGGCCRTTPKDIAALTV 308
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 134/256 (52%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE + H D+ RAGA + ++ YQA
Sbjct: 18 VLDGAMATELEARGCNLADS--LWSAKVLMENPELIRDVHLDYYRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A++ L + N G + A S+GPYG
Sbjct: 76 AGFAARGLDESQSRALIGKSVELARKAREA-------YLAENAN--AGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV S E A+HRP VEAL+ AG D LA ET+P+ E AL LL
Sbjct: 127 AYLADGSEYRGDYVRSAEE--FTAFHRPRVEALLDAGADLLACETLPSFTEIKALAALLT 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
FP +AW SF+ +D H S G + V++ L N Q+ A+G+NC+ + ++ + +
Sbjct: 185 AFPRARAWFSFTLRDSEHLSDGTPLRDVVSA--LENYPQVVALGINCIALENTTSALTHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S ++ +VYPN G
Sbjct: 243 -HSLTSLPLVVYPNSG 257
>gi|228900939|ref|ZP_04065153.1| Homocysteine S-methyltransferase [Bacillus thuringiensis IBL 4222]
gi|228858713|gb|EEN03159.1| Homocysteine S-methyltransferase [Bacillus thuringiensis IBL 4222]
Length = 308
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 144/260 (55%), Gaps = 22/260 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ H D PLWS+ L PE + H D+ RAGAD ++ YQA +
Sbjct: 2 LLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQATI 59
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAASIG 125
+ G EQEAL+L+ K+V L A+D KEN N+ L+ AS+G
Sbjct: 60 SGFSTRGIQEQEALELIKKTVLLARRARDDFWKEN----TQTNRPKPLVV------ASVG 109
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 110 PYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDT 167
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
LLREFP AWLSFS K++ S G +L+ A + +QI AIG+NC + V+
Sbjct: 168 LLREFPETYAWLSFSLKNEKEISEGMKLVECAR---VFEKSEQIVAIGINCAPVTVVTGA 224
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
++ ++ ++ IVYPN G
Sbjct: 225 IQELR-ANTKKPIIVYPNSG 243
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 152/309 (49%), Gaps = 26/309 (8%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
LLDG+ +++ H D PLWS+ L PE + H D+ R + A + T+
Sbjct: 2 LLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQATI 59
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA------LIKPSISSQTAASI 380
SG + E + + + V RA D+ KP + AS+
Sbjct: 60 -------SGFSTRGIQEQEALELIKKTVLLARRARDDFWKENTQTNRPKPLV----VASV 108
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 109 GPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLD 166
Query: 441 KLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
LLREFP AWLSFS K++ S G +L+ A + +QI AIG+NC + V+
Sbjct: 167 TLLREFPETYAWLSFSLKNEKEISEGMKLVECAR---VFEKSEQIVAIGINCAPVTVVTG 223
Query: 500 LVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
++ ++ ++ IVYPN G ++ W E ++ +W + G +IGGCC
Sbjct: 224 AIQELR-ANTKKPIIVYPNSGETYNPETKTWHGHEQCNALNIQSEEWYQAGARLIGGCCR 282
Query: 560 VTSYEIQQM 568
T Y I+++
Sbjct: 283 TTPYHIEEI 291
>gi|345298028|ref|YP_004827386.1| homocysteine S-methyltransferase [Enterobacter asburiae LF7a]
gi|345091965|gb|AEN63601.1| homocysteine S-methyltransferase [Enterobacter asburiae LF7a]
Length = 310
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 151/303 (49%), Gaps = 15/303 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D LWS+ L PE E H D+ R + A + T
Sbjct: 18 ILDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYFRAGAQVAITASYQATP 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+G + +A A +VE +A YLA + + A S+GPYG
Sbjct: 76 -------AGFAARGLDDAQSRALIGKSVELARKAREAYLAENPHAGTLLVAGSVGPYGAY 128
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G YV S E A+HRP VEAL+ AG D LA ET+P+ E+ AL LL E+
Sbjct: 129 LADGSEYRGDYVRSAEE--FTAFHRPRVEALLDAGADLLACETLPSFAESKALAALLSEY 186
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P +AW SF+ +D H S G + + L QI A+G+NC+ + + + + Q
Sbjct: 187 PRARAWFSFTLRDSEHLSDGTPLREVIAE--LVRYPQIVALGINCIALENTTAALHYL-Q 243
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
S ++ +VYPN G +D+V W E ++ Y+PQWL G +IGGCC T +I
Sbjct: 244 SLTSLPLVVYPNSGEHYDAVTKTWHHHGEACEALAGYLPQWLAAGAKLIGGCCRTTPKDI 303
Query: 566 QQM 568
++
Sbjct: 304 AEL 306
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 131/256 (51%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE E H D+ RAGA + ++ YQA
Sbjct: 18 ILDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYFRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G + ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARGLDDAQSRALIGKSVELARKAREAYLAE---------NPHAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV S E A+HRP VEAL+ AG D LA ET+P+ E+ AL LL
Sbjct: 127 AYLADGSEYRGDYVRSAEE--FTAFHRPRVEALLDAGADLLACETLPSFAESKALAALLS 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E+P +AW SF+ +D H S G + + L QI A+G+NC+ + + + +
Sbjct: 185 EYPRARAWFSFTLRDSEHLSDGTPLREVIAE--LVRYPQIVALGINCIALENTTAALHYL 242
Query: 249 KQSHPTVQTIVYPNKG 264
QS ++ +VYPN G
Sbjct: 243 -QSLTSLPLVVYPNSG 257
>gi|229170211|ref|ZP_04297896.1| Homocysteine S-methyltransferase [Bacillus cereus AH621]
gi|228613269|gb|EEK70409.1| Homocysteine S-methyltransferase [Bacillus cereus AH621]
Length = 308
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 143/260 (55%), Gaps = 22/260 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ H D PLWS+ L PE + H D+ RAGAD ++ YQA +
Sbjct: 2 LLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQATI 59
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAASIG 125
+ G EQEAL+L+ K+V L A+D KEN N+ L+ AS+G
Sbjct: 60 SGFSARGIQEQEALELIKKTVLLARRARDDFWKEN----TQTNRPKPLVV------ASVG 109
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 110 PYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDT 167
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
LLREFP AWLSFS K++ S G +L+ A +QI AIG+NC + V+
Sbjct: 168 LLREFPETYAWLSFSLKNEKEISEGMKLVECARA---FEKSEQIVAIGINCAPVTVVTGA 224
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
++ ++ ++ IVYPN G
Sbjct: 225 IQELR-ANTKKPIIVYPNSG 243
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 151/309 (48%), Gaps = 26/309 (8%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
LLDG+ +++ H D PLWS+ L PE + H D+ R + A + T+
Sbjct: 2 LLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQATI 59
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA------LIKPSISSQTAASI 380
SG + E + + + V RA D+ KP + AS+
Sbjct: 60 -------SGFSARGIQEQEALELIKKTVLLARRARDDFWKENTQTNRPKPLV----VASV 108
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 109 GPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLD 166
Query: 441 KLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
LLREFP AWLSFS K++ S G +L+ A +QI AIG+NC + V+
Sbjct: 167 TLLREFPETYAWLSFSLKNEKEISEGMKLVECARA---FEKSEQIVAIGINCAPVTVVTG 223
Query: 500 LVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
++ ++ ++ IVYPN G ++ W E ++ +W + G +IGGCC
Sbjct: 224 AIQELR-ANTKKPIIVYPNSGETYNPESKTWHGHEQCNALDIQSEEWYQAGARLIGGCCR 282
Query: 560 VTSYEIQQM 568
T Y I+++
Sbjct: 283 TTPYHIEEI 291
>gi|311070893|ref|YP_003975816.1| homocysteine methyltransferase [Bacillus atrophaeus 1942]
gi|419822759|ref|ZP_14346330.1| homocysteine methyltransferase [Bacillus atrophaeus C89]
gi|310871410|gb|ADP34885.1| homocysteine methyltransferase [Bacillus atrophaeus 1942]
gi|388473127|gb|EIM09879.1| homocysteine methyltransferase [Bacillus atrophaeus C89]
Length = 310
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/258 (37%), Positives = 140/258 (54%), Gaps = 18/258 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R D LWS+ L +P + H D+ AGAD ++ YQ+ +
Sbjct: 15 ILDGAMATELERKGCDLNDS--LWSAKILMEQPNLIKQVHTDYFAAGADCAITASYQSTI 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKE-NQTPDINLNKTFNLLTGHIETAASIGPY 127
+ G S EAL L+ KSV + A+D+ Q + K AAS+GPY
Sbjct: 73 EGFAARGVSRAEALRLIQKSVHIAAEARDEFWEQHKSSDRPKPI--------VAASVGPY 124
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y MTE +L+ +H P ++AL+ AG D LA ETIP EA A+V+LL
Sbjct: 125 GAFLADGSEYRGDY--QMTEEELMDFHMPRMKALIEAGADILACETIPCLSEAKAIVRLL 182
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR- 246
++FPG AW+SFS KD+ H S G ++ L Q+ A G+NC ++ +L++
Sbjct: 183 QKFPGTYAWISFSAKDEKHISDGTPVAECAK--WLDQHGQVAAAGINCTPIQYIPSLIKE 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
C K + + IVYPN G
Sbjct: 241 CKKNTAKPI--IVYPNSG 256
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 148/305 (48%), Gaps = 18/305 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ R D LWS+ L +P + H D+ + A + T+
Sbjct: 15 ILDGAMATELERKGCDLNDS--LWSAKILMEQPNLIKQVHTDYFAAGADCAITASYQSTI 72
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--TAASIGPYG 384
G ++ A+ + + +V A ++ K S + AAS+GPYG
Sbjct: 73 -------EGFAARGVSRAEALRLIQKSVHIAAEARDEFWEQHKSSDRPKPIVAASVGPYG 125
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
L DGSEY G Y MTE +L+ +H P ++AL+ AG D LA ETIP EA A+V+LL+
Sbjct: 126 AFLADGSEYRGDY--QMTEEELMDFHMPRMKALIEAGADILACETIPCLSEAKAIVRLLQ 183
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR-C 503
+FPG AW+SFS KD+ H S G ++ L Q+ A G+NC ++ +L++ C
Sbjct: 184 KFPGTYAWISFSAKDEKHISDGTPVAECAK--WLDQHGQVAAAGINCTPIQYIPSLIKEC 241
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
K + + IVYPN G +D W W + G +IGGCC T
Sbjct: 242 KKNTAKPI--IVYPNSGEQYDPDTKTWNGAACAEPYEKSAQNWRKCGAQLIGGCCRTTPE 299
Query: 564 EIQQM 568
+I+ +
Sbjct: 300 DIKAI 304
>gi|390940140|ref|YP_006403877.1| homocysteine/selenocysteine methylase [Sulfurospirillum barnesii
SES-3]
gi|390193247|gb|AFL68302.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Sulfurospirillum
barnesii SES-3]
Length = 311
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/261 (39%), Positives = 140/261 (53%), Gaps = 17/261 (6%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
KV +LDG+F +++ R D LWS+ +L +PEA E H D++ AG+D I ++ YQ
Sbjct: 12 KVFILDGAFGTELERKGYDINDS--LWSAKFLMEKPEAIAEVHLDYLNAGSDCITTASYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
A+ + K G SE EA L+ SV++ +D ++ + L+ AASIG
Sbjct: 70 ASFEGFMKRGMSEAEAKALIVSSVKIAQKVRDDFWSDTKNHVKRLKPLV------AASIG 123
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSE+ G+Y SM L+ +HR + L+ A D LA ETIP EA AL
Sbjct: 124 PYGAYLADGSEFRGNYGLSMEA--LMNFHRKRLLTLIEAKPDLLACETIPCLVEAKALCA 181
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
LL +P AW+SFS KD H + GE + L + QI AIG+NC P + +L+
Sbjct: 182 LLEGYPAVSAWVSFSAKDGEHINSGEKVRECAQ--FLESQKQIVAIGINCTAPQFIESLI 239
Query: 246 RCIK--QSHPTVQTIVYPNKG 264
IK S P IVYPN G
Sbjct: 240 DEIKAVSSKP---IIVYPNGG 257
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 158/318 (49%), Gaps = 31/318 (9%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIG 321
V +LDG+F +++ R D LWS+ +L +PEA E H D++ I TA+
Sbjct: 13 VFILDGAFGTELERKGYDINDS--LWSAKFLMEKPEAIAEVHLDYLNAGSDCITTASYQA 70
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIK---PSISSQTAA 378
+ ++ G M+EA+ A +V+ + D+ + K + AA
Sbjct: 71 SFEGFMKRG----------MSEAEAKALIVSSVKIAQKVRDDFWSDTKNHVKRLKPLVAA 120
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
SIGPYG L DGSE+ G+Y SM L+ +HR + L+ A D LA ETIP EA A
Sbjct: 121 SIGPYGAYLADGSEFRGNYGLSMEA--LMNFHRKRLLTLIEAKPDLLACETIPCLVEAKA 178
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
L LL +P AW+SFS KD H + GE + L + QI AIG+NC P +
Sbjct: 179 LCALLEGYPAVSAWVSFSAKDGEHINSGEKVRECAQ--FLESQKQIVAIGINCTAPQFIE 236
Query: 499 TLVRCIK--QSHPTVQTIVYPNKGGVWDSVHMKW--LDTEDEYSILHYVPQWLEEGVNII 554
+L+ IK S P IVYPN G ++++ W L Y + Y W ++G +I
Sbjct: 237 SLIDEIKAVSSKP---IIVYPNGGSSYNALTKTWDGLSKNASYGKMAY--GWYQKGARLI 291
Query: 555 GGCCEVTSYEIQQMRIMI 572
GGCC+ T +I Q+ + +
Sbjct: 292 GGCCQTTPEDIAQIAVWV 309
>gi|373456109|ref|ZP_09547911.1| hypothetical protein HMPREF9453_02080, partial [Dialister
succinatiphilus YIT 11850]
gi|371934192|gb|EHO61999.1| hypothetical protein HMPREF9453_02080, partial [Dialister
succinatiphilus YIT 11850]
Length = 287
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/258 (37%), Positives = 140/258 (54%), Gaps = 18/258 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+F++++ R D LWS++ L P+ HR + AG+DI+ S+ YQA +
Sbjct: 13 VLDGAFSTELERQGFSIND--ELWSAIALYERPDLVKAVHRSYFDAGSDIVTSASYQATL 70
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGP 126
+ K G+S +E +LL +SVQL+ A+D+ +P+ + L AAS+GP
Sbjct: 71 EGFEKKGFSRKEGRELLIRSVQLVQEARDEFLAESSPE---RRPVPL------AAASVGP 121
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY GHY T +L +HR + L AG D A ETIP EALA +
Sbjct: 122 YGAFLADGSEYKGHY--GKTREELADFHRERLHILAEAGPDIFACETIPCLLEALAETDV 179
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L E AW+SFSCKD HT + I + L ++AIGVNC P +V +L+
Sbjct: 180 LSEIKNASAWVSFSCKDGLHTCGDDYIGDCAKA--LDPIPCVKAIGVNCTAPEYVESLIL 237
Query: 247 CIKQSHPTVQTIVYPNKG 264
I++ + + +VYPN G
Sbjct: 238 EIRK-YTSKPVVVYPNSG 254
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 138/291 (47%), Gaps = 18/291 (6%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+F++++ R D LWS++ L P+ HR + + S T+
Sbjct: 13 VLDGAFSTELERQGFSIND--ELWSAIALYERPDLVKAVHRSYFDAGSDIVTSASYQATL 70
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISS--QTAASIGPYG 384
+G E G E LI +V+ + A ++LA P AAS+GPYG
Sbjct: 71 --EGFEKKGFSRKEGREL-LIR----SVQLVQEARDEFLAESSPERRPVPLAAASVGPYG 123
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
L DGSEY GHY T +L +HR + L AG D A ETIP EALA +L
Sbjct: 124 AFLADGSEYKGHY--GKTREELADFHRERLHILAEAGPDIFACETIPCLLEALAETDVLS 181
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 504
E AW+SFSCKD HT + I + L ++AIGVNC P +V +L+ I
Sbjct: 182 EIKNASAWVSFSCKDGLHTCGDDYIGDCAKA--LDPIPCVKAIGVNCTAPEYVESLILEI 239
Query: 505 KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
++ + + +VYPN G +D W +Y+ +V W + G +IG
Sbjct: 240 RK-YTSKPVVVYPNSGEHYDPSDKTWGGAAADYA--DFVKIWQKAGARLIG 287
>gi|423602850|ref|ZP_17578849.1| hypothetical protein III_05651 [Bacillus cereus VD078]
gi|401223975|gb|EJR30536.1| hypothetical protein III_05651 [Bacillus cereus VD078]
Length = 325
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 144/262 (54%), Gaps = 22/262 (8%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ H D PLWS+ L PE + H D+ RAGAD ++ YQA
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQA 74
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAAS 123
+ + G EQEAL+L+ K+V L A+D KEN N+ L+ AS
Sbjct: 75 TIGGFSACGILEQEALELIKKTVLLARRARDDFWKEN----TQTNRPKPLVV------AS 124
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 125 VGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVL 182
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
LLREFP AWLSFS K++ S G +L+ A +QI AIG+NC + V+
Sbjct: 183 DTLLREFPETYAWLSFSLKNEKEISEGMKLVECARA---FEKSEQIVAIGINCAPVTVVT 239
Query: 243 TLVRCIKQSHPTVQTIVYPNKG 264
++ ++ ++ IVYPN G
Sbjct: 240 GAIQELR-ANTKKPIIVYPNSG 260
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 151/311 (48%), Gaps = 26/311 (8%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG+ +++ H D PLWS+ L PE + H D+ R + A +
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQA 74
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA------LIKPSISSQTAA 378
T+ G + E + + + V RA D+ KP + A
Sbjct: 75 TI-------GGFSACGILEQEALELIKKTVLLARRARDDFWKENTQTNRPKPLV----VA 123
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA
Sbjct: 124 SVGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARV 181
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
L LLREFP AWLSFS K++ S G +L+ A +QI AIG+NC + V
Sbjct: 182 LDTLLREFPETYAWLSFSLKNEKEISEGMKLVECARA---FEKSEQIVAIGINCAPVTVV 238
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
+ ++ ++ ++ IVYPN G ++ W E ++ +W + G +IGGC
Sbjct: 239 TGAIQELR-ANTKKPIIVYPNSGETYNPESKTWHGHEQCNALDIQSEEWYQAGARLIGGC 297
Query: 558 CEVTSYEIQQM 568
C T Y I+++
Sbjct: 298 CRTTPYHIEEI 308
>gi|261340957|ref|ZP_05968815.1| homocysteine S-methyltransferase [Enterobacter cancerogenus ATCC
35316]
gi|288316817|gb|EFC55755.1| homocysteine S-methyltransferase [Enterobacter cancerogenus ATCC
35316]
Length = 310
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 160/322 (49%), Gaps = 17/322 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + + +LDG+ +++ D LWS+ L PE E H
Sbjct: 1 MSQNNPL--TALLETQPYVVLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + EA +VE +A YLA
Sbjct: 57 DYYRAGAQVAITASYQATP-------AGFAARGLDEAQSRVLIGKSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G YV S E +HRP VEAL+ AG D LA
Sbjct: 110 NANAGTLLVAGSVGPYGAYLADGSEYRGDYVRSAEE--FTRFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P+ E AL LL E+P +AW SF+ +D H S G + V++ L++ QI A+
Sbjct: 168 ETLPSFAEIKALASLLAEYPRARAWFSFTLRDSEHLSDGTALREVVSA--LSHYPQIVAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQW 546
G+NC+ + + ++ + S + +VYPN G +D+V W E ++ Y+PQW
Sbjct: 226 GINCIALENTTAALKHL-NSLTALPLVVYPNSGEHYDAVTKTWHHHGEACETLAGYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
LE G +IGGCC T +I ++
Sbjct: 285 LEAGAKLIGGCCRTTPKDIAEL 306
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 134/256 (52%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE E H D+ RAGA + ++ YQA
Sbjct: 18 VLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A++ L + N G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSRVLIGKSVELARKAREA-------YLAENAN--AGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV S E +HRP VEAL+ AG D LA ET+P+ E AL LL
Sbjct: 127 AYLADGSEYRGDYVRSAEE--FTRFHRPRVEALLDAGADLLACETLPSFAEIKALASLLA 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E+P +AW SF+ +D H S G + V++ L++ QI A+G+NC+ + + ++ +
Sbjct: 185 EYPRARAWFSFTLRDSEHLSDGTALREVVSA--LSHYPQIVALGINCIALENTTAALKHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S + +VYPN G
Sbjct: 243 -NSLTALPLVVYPNSG 257
>gi|229065347|ref|ZP_04200624.1| Homocysteine S-methyltransferase [Bacillus cereus AH603]
gi|228715915|gb|EEL67655.1| Homocysteine S-methyltransferase [Bacillus cereus AH603]
Length = 308
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 143/260 (55%), Gaps = 22/260 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ H D PLWS+ L PE + H D+ RAGAD ++ YQA +
Sbjct: 2 LLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQATI 59
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAASIG 125
+ G EQEAL+L+ K+V L A+D KEN N+ L+ AS+G
Sbjct: 60 SGFSARGIQEQEALELIKKTVLLARRARDDFWKEN----TQTNRPKPLVV------ASVG 109
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 110 PYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDT 167
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
LLREFP AWLSFS K++ S G +L+ A +QI AIG+NC + V+
Sbjct: 168 LLREFPETYAWLSFSLKNEKEISEGMKLVECARA---FEKSEQIVAIGINCAPVTVVTGA 224
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
++ ++ ++ I+YPN G
Sbjct: 225 IQELR-ANTKKPIIIYPNSG 243
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 151/309 (48%), Gaps = 26/309 (8%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
LLDG+ +++ H D PLWS+ L PE + H D+ R + A + T+
Sbjct: 2 LLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQATI 59
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA------LIKPSISSQTAASI 380
SG + E + + + V RA D+ KP + AS+
Sbjct: 60 -------SGFSARGIQEQEALELIKKTVLLARRARDDFWKENTQTNRPKPLV----VASV 108
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 109 GPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLD 166
Query: 441 KLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
LLREFP AWLSFS K++ S G +L+ A +QI AIG+NC + V+
Sbjct: 167 TLLREFPETYAWLSFSLKNEKEISEGMKLVECARA---FEKSEQIVAIGINCAPVTVVTG 223
Query: 500 LVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
++ ++ ++ I+YPN G ++ W E ++ +W + G +IGGCC
Sbjct: 224 AIQELR-ANTKKPIIIYPNSGETYNPETKTWHGHEQCNTLDIQSEEWYQAGARLIGGCCR 282
Query: 560 VTSYEIQQM 568
T Y I+++
Sbjct: 283 TTPYHIEEI 291
>gi|392977804|ref|YP_006476392.1| homocysteine methyltransferase [Enterobacter cloacae subsp.
dissolvens SDM]
gi|392323737|gb|AFM58690.1| homocysteine methyltransferase [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 310
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 159/322 (49%), Gaps = 17/322 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + + +LDG+ +++ D LWS+ L PE E H
Sbjct: 1 MSQNNPL--TALLEKQPFVVLDGAMATELEARGCNLADN--LWSAKVLMENPELIREVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + EA A +VE +A YLA
Sbjct: 57 DYYRAGAQVAITASYQATP-------AGFAARGLDEAQSRALIGKSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G YV E A+HRP +EAL+ AG D LA
Sbjct: 110 NPQAGTLLVAGSVGPYGAYLADGSEYRGDYVRRAEE--FTAFHRPRIEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P+ +E L LL E+P +AW SF+ +D H S G + V + L + Q+ A+
Sbjct: 168 ETLPSFEEIKTLAALLAEYPRARAWFSFTLRDSEHLSDGTPLREVVAA--LKDNAQVVAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQW 546
G+NC+ + + ++ + S + +VYPN G +D+V W E ++ Y+PQW
Sbjct: 226 GINCIALENTTAALKHL-HSLTALPLVVYPNSGEHYDAVTKTWHHHGEACETLAGYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
LE G +IGGCC T +I ++
Sbjct: 285 LEAGARLIGGCCRTTPKDIAEL 306
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 130/256 (50%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE E H D+ RAGA + ++ YQA
Sbjct: 18 VLDGAMATELEARGCNLADN--LWSAKVLMENPELIREVHLDYYRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSRALIGKSVELARKAREA---------YLAENPQAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV E A+HRP +EAL+ AG D LA ET+P+ +E L LL
Sbjct: 127 AYLADGSEYRGDYVRRAEE--FTAFHRPRIEALLDAGADLLACETLPSFEEIKTLAALLA 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E+P +AW SF+ +D H S G + V + L + Q+ A+G+NC+ + + ++ +
Sbjct: 185 EYPRARAWFSFTLRDSEHLSDGTPLREVVAA--LKDNAQVVALGINCIALENTTAALKHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S + +VYPN G
Sbjct: 243 -HSLTALPLVVYPNSG 257
>gi|333928501|ref|YP_004502080.1| Homocysteine S-methyltransferase [Serratia sp. AS12]
gi|333933454|ref|YP_004507032.1| Homocysteine S-methyltransferase [Serratia plymuthica AS9]
gi|386330324|ref|YP_006026494.1| Homocysteine S-methyltransferase [Serratia sp. AS13]
gi|333475061|gb|AEF46771.1| Homocysteine S-methyltransferase [Serratia plymuthica AS9]
gi|333492561|gb|AEF51723.1| Homocysteine S-methyltransferase [Serratia sp. AS12]
gi|333962657|gb|AEG29430.1| Homocysteine S-methyltransferase [Serratia sp. AS13]
Length = 312
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 162/316 (51%), Gaps = 16/316 (5%)
Query: 254 TVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH 313
TV ++ N+ + +LDG+ +++ D PLWS+ L PE + H D+
Sbjct: 6 TVAALLAANRTL-ILDGALATELEARGCDLSD--PLWSAKVLIENPELIYQVHLDYFNAG 62
Query: 314 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSIS 373
+ A + T L G + + +A +V+ +A DYLA +
Sbjct: 63 AQCAITASYQATPL-------GFLRRGLNQQQSLALIAKSVQLAQQARSDYLAQHPQAAP 115
Query: 374 SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
A S+GPYG L DGSEY G Y S+ + ++IA+HRP + AL AGVD LA ET+P+
Sbjct: 116 LLIAGSVGPYGAYLADGSEYRGDY--SLPQEEMIAFHRPRIAALAEAGVDLLACETLPSF 173
Query: 434 KEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
E AL+ LL+EFP AW +F+ +D H S G ++ V + L NP Q+ A+G+NC+
Sbjct: 174 SELQALLTLLQEFPTLGAWFAFTLRDSQHLSDGTPLTQ-VLAALHGNP-QVLAMGINCIA 231
Query: 494 PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVN 552
+V+ +R + + +VYPN G +D+V W E S++ + +W G
Sbjct: 232 LENVTPALRQLA-TLTDKPLLVYPNSGEHYDAVTKTWHACGGENGSLIDQIGEWQNIGAR 290
Query: 553 IIGGCCEVTSYEIQQM 568
+IGGCC T +I+Q+
Sbjct: 291 LIGGCCRTTPQDIRQI 306
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 140/260 (53%), Gaps = 18/260 (6%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ +LDG+ +++ D PLWS+ L PE + H D+ AGA ++ YQ
Sbjct: 15 RTLILDGALATELEARGCDLSD--PLWSAKVLIENPELIYQVHLDYFNAGAQCAITASYQ 72
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASI 124
A + G ++Q++L L+ KSVQL A+ D Q P + A S+
Sbjct: 73 ATPLGFLRRGLNQQQSLALIAKSVQLAQQARSDYLAQHPQ----------AAPLLIAGSV 122
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSEY G Y S+ + ++IA+HRP + AL AGVD LA ET+P+ E AL+
Sbjct: 123 GPYGAYLADGSEYRGDY--SLPQEEMIAFHRPRIAALAEAGVDLLACETLPSFSELQALL 180
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
LL+EFP AW +F+ +D H S G ++ V + L NP Q+ A+G+NC+ +V+
Sbjct: 181 TLLQEFPTLGAWFAFTLRDSQHLSDGTPLTQ-VLAALHGNP-QVLAMGINCIALENVTPA 238
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
+R + + +VYPN G
Sbjct: 239 LRQLA-TLTDKPLLVYPNSG 257
>gi|423118862|ref|ZP_17106546.1| homocysteine S-methyltransferase [Klebsiella oxytoca 10-5246]
gi|376400606|gb|EHT13218.1| homocysteine S-methyltransferase [Klebsiella oxytoca 10-5246]
Length = 310
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 157/322 (48%), Gaps = 17/322 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + + LLDG+ +++ D LWS+ L PE E H
Sbjct: 1 MSQNNPL--TAILDAQPFILLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + EA A +VE +A YLA
Sbjct: 57 DYFRAGAQVAITASYQATP-------AGFAARGLDEAQSKALIGKSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G YV S E A+HRP VEAL+ AG D LA
Sbjct: 110 NPQAGTLLVAGSVGPYGAFLADGSEYRGDYVRSHEE--FQAFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P E AL +LL +P +AW SF+ +D H S G + ++ +LAN QI A+
Sbjct: 168 ETMPGFAEIKALAELLSTYPRARAWFSFTLRDAQHLSDGTPLREVIS--ILANYPQIVAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQW 546
G+NC+ + + + S + +VYPN G +D V W E ++ Y+P+W
Sbjct: 226 GINCIALEETTAALEHL-HSLTALPLVVYPNSGEHYDPVSKTWHHHGEACETLAGYLPRW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
L G +IGGCC T +I ++
Sbjct: 285 LAAGAKLIGGCCRTTPKDIAEL 306
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 130/256 (50%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L PE E H D+ RAGA + ++ YQA
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHLDYFRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSKALIGKSVELARKAREAYLAE---------NPQAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV S E A+HRP VEAL+ AG D LA ET+P E AL +LL
Sbjct: 127 AFLADGSEYRGDYVRSHEE--FQAFHRPRVEALLDAGADLLACETMPGFAEIKALAELLS 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+P +AW SF+ +D H S G + ++ +LAN QI A+G+NC+ + + +
Sbjct: 185 TYPRARAWFSFTLRDAQHLSDGTPLREVIS--ILANYPQIVALGINCIALEETTAALEHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S + +VYPN G
Sbjct: 243 -HSLTALPLVVYPNSG 257
>gi|334123253|ref|ZP_08497281.1| homocysteine S-methyltransferase [Enterobacter hormaechei ATCC
49162]
gi|333390875|gb|EGK62000.1| homocysteine S-methyltransferase [Enterobacter hormaechei ATCC
49162]
Length = 351
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 162/332 (48%), Gaps = 17/332 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + N+ +LDG+ +++ D LWS+ L PE + H
Sbjct: 1 MSQNNPL--TALLENQPFIVLDGAMATELEARGCNLADS--LWSAKVLMENPELIRDVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + EA A +VE +A YLA
Sbjct: 57 DYYRAGAQVAITASYQATP-------AGFAARGLDEAQSRALIGKSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G YV E +HRP VEAL+ AG D LA
Sbjct: 110 NAQAGTLLVAGSVGPYGAYLADGSEYRGDYVRRAEE--FTEFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P+ E AL LL +P +AW SF+ +D H S G + V+ +L N Q+ A+
Sbjct: 168 ETLPSFPEIKALAALLTAYPRARAWFSFTLRDSEHLSDGTPLRDVVS--VLENYPQVVAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQW 546
G+NC+ + + + + S ++ +VYPN G +D+V W E ++ Y+PQW
Sbjct: 226 GINCIALENTTAALTHL-HSLTSLPLVVYPNSGEHYDAVSKTWHHHGEACETLAGYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQMRIMIDEFNTK 578
LE G +IGGCC T +I +++ N +
Sbjct: 285 LEAGAKLIGGCCRTTPKDIAELKRSATRRNNR 316
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 129/256 (50%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE + H D+ RAGA + ++ YQA
Sbjct: 18 VLDGAMATELEARGCNLADS--LWSAKVLMENPELIRDVHLDYYRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSRALIGKSVELARKAREAYLAE---------NAQAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV E +HRP VEAL+ AG D LA ET+P+ E AL LL
Sbjct: 127 AYLADGSEYRGDYVRRAEE--FTEFHRPRVEALLDAGADLLACETLPSFPEIKALAALLT 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+P +AW SF+ +D H S G + V+ +L N Q+ A+G+NC+ + + + +
Sbjct: 185 AYPRARAWFSFTLRDSEHLSDGTPLRDVVS--VLENYPQVVALGINCIALENTTAALTHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S ++ +VYPN G
Sbjct: 243 -HSLTSLPLVVYPNSG 257
>gi|300718011|ref|YP_003742814.1| homocysteine S-methyltransferase [Erwinia billingiae Eb661]
gi|299063847|emb|CAX60967.1| Homocysteine S-methyltransferase [Erwinia billingiae Eb661]
Length = 300
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 150/286 (52%), Gaps = 18/286 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE + H D+ AGA + ++ YQA
Sbjct: 6 VLDGAMATELEARGCDLTDA--LWSAKVLIENPELIYQVHYDYFNAGAQVAITASYQATP 63
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASIGPY 127
K G SE+++L L+ +SV+L + A+ D + P G++ A S+GPY
Sbjct: 64 LGFAKRGLSEEQSLTLIARSVELASRARADYKAAEPQ----------AGNLLIAGSVGPY 113
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y S+ +A+++A+HRP ++ALV AG D LA ET+P+ E ALV LL
Sbjct: 114 GAYLADGSEYRGDY--SLPQAEMMAFHRPRIQALVAAGADILACETMPSFAEIQALVALL 171
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFPG AW SF+ +D H S G +S V+ +L + Q A+G+NC+ V+ ++
Sbjct: 172 AEFPGTPAWFSFTLRDGEHLSDGTPLSQVVS--VLESCPQAVALGLNCIALDKVTAALQT 229
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSV 293
+ S +VYPN G + S T T +D W S
Sbjct: 230 LS-SLTKKPLVVYPNSGEQYDAISKTWHSDASTCTLIDNLSAWQSA 274
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 149/299 (49%), Gaps = 14/299 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D LWS+ L PE + H D+ + A + T
Sbjct: 6 VLDGAMATELEARGCDLTDA--LWSAKVLIENPELIYQVHYDYFNAGAQVAITASYQATP 63
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
L G ++E + +VE RA DY A + + A S+GPYG
Sbjct: 64 L-------GFAKRGLSEEQSLTLIARSVELASRARADYKAAEPQAGNLLIAGSVGPYGAY 116
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y S+ +A+++A+HRP ++ALV AG D LA ET+P+ E ALV LL EF
Sbjct: 117 LADGSEYRGDY--SLPQAEMMAFHRPRIQALVAAGADILACETMPSFAEIQALVALLAEF 174
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
PG AW SF+ +D H S G +S V+ +L + Q A+G+NC+ V+ ++ +
Sbjct: 175 PGTPAWFSFTLRDGEHLSDGTPLSQVVS--VLESCPQAVALGLNCIALDKVTAALQTLS- 231
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
S +VYPN G +D++ W +++ + W G +IGGCC T +I
Sbjct: 232 SLTKKPLVVYPNSGEQYDAISKTWHSDASTCTLIDNLSAWQSAGAKLIGGCCRTTPADI 290
>gi|229077032|ref|ZP_04209790.1| Homocysteine S-methyltransferase [Bacillus cereus Rock4-18]
gi|228706234|gb|EEL58513.1| Homocysteine S-methyltransferase [Bacillus cereus Rock4-18]
Length = 308
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 142/260 (54%), Gaps = 22/260 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ H D PLWS+ L PE + H D+ RAGAD ++ YQA +
Sbjct: 2 LLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQATI 59
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAASIG 125
+ G EQEAL+L+ K+V L A+D KEN N+ L+ AS+G
Sbjct: 60 SGFSARGIQEQEALELIKKTVLLARRARDDFWKEN----TQTNRPKPLVV------ASVG 109
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 110 PYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDT 167
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
LLREFP AWLSFS K++ S G +L+ A +QI AIG+NC V+
Sbjct: 168 LLREFPETYAWLSFSLKNEKEISEGIKLVECARA---FEKSEQIVAIGINCAPVIVVTGA 224
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
++ ++ ++ IVYPN G
Sbjct: 225 IQGLR-ANTKKPIIVYPNSG 243
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 151/309 (48%), Gaps = 26/309 (8%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
LLDG+ +++ H D PLWS+ L PE + H D+ R + A + T+
Sbjct: 2 LLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQATI 59
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA------LIKPSISSQTAASI 380
SG + E + + + V RA D+ KP + AS+
Sbjct: 60 -------SGFSARGIQEQEALELIKKTVLLARRARDDFWKENTQTNRPKPLV----VASV 108
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GPYG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L
Sbjct: 109 GPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLD 166
Query: 441 KLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
LLREFP AWLSFS K++ S G +L+ A +QI AIG+NC V+
Sbjct: 167 TLLREFPETYAWLSFSLKNEKEISEGIKLVECARA---FEKSEQIVAIGINCAPVIVVTG 223
Query: 500 LVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
++ ++ ++ IVYPN G ++ W D E ++ +W + G +IGGCC
Sbjct: 224 AIQGLR-ANTKKPIIVYPNSGETYNPETKTWHDHEQCNALDIQSEEWYQAGARLIGGCCR 282
Query: 560 VTSYEIQQM 568
T Y I+++
Sbjct: 283 TTPYHIEEI 291
>gi|296101466|ref|YP_003611612.1| homocysteine methyltransferase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295055925|gb|ADF60663.1| homocysteine methyltransferase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 310
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 160/322 (49%), Gaps = 17/322 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + + +LDG+ +++ D LWS+ L PE E H
Sbjct: 1 MSQNNPL--TALLEKQPFVVLDGAMATELEARGCNLADN--LWSAKVLMENPELIREVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + EA A +VE +A YLA
Sbjct: 57 DYYRAGAQVAITASYQATP-------AGFAARGLDEAQSRALIGKSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G YV E A+HRP +EAL+ AG D LA
Sbjct: 110 NPHAGTLLVAGSVGPYGAYLADGSEYRGDYVRRAEE--FTAFHRPRIEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P+ +E AL L+ E+P +AW SF+ +D H S G + V + L + Q+ A+
Sbjct: 168 ETLPSFEEIKALAALVAEYPRARAWFSFTLRDSEHLSDGTPLLEVVAA--LKDNSQVVAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQW 546
G+NC+ + + ++ + S + +VYPN G +D+V W E ++ Y+PQW
Sbjct: 226 GINCIALENTTAALKHL-HSLTALPLVVYPNSGEHYDAVTKTWHHHGEACETLAGYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
LE G +IGGCC T +I ++
Sbjct: 285 LEAGARLIGGCCRTTPKDIAEL 306
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 131/256 (51%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE E H D+ RAGA + ++ YQA
Sbjct: 18 VLDGAMATELEARGCNLADN--LWSAKVLMENPELIREVHLDYYRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSRALIGKSVELARKAREA---------YLAENPHAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV E A+HRP +EAL+ AG D LA ET+P+ +E AL L+
Sbjct: 127 AYLADGSEYRGDYVRRAEE--FTAFHRPRIEALLDAGADLLACETLPSFEEIKALAALVA 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E+P +AW SF+ +D H S G + V + L + Q+ A+G+NC+ + + ++ +
Sbjct: 185 EYPRARAWFSFTLRDSEHLSDGTPLLEVVAA--LKDNSQVVALGINCIALENTTAALKHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S + +VYPN G
Sbjct: 243 -HSLTALPLVVYPNSG 257
>gi|379705417|ref|YP_005203876.1| homocysteine methyltransferase [Streptococcus infantarius subsp.
infantarius CJ18]
gi|374682116|gb|AEZ62405.1| homocysteine methyltransferase [Streptococcus infantarius subsp.
infantarius CJ18]
Length = 314
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 152/269 (56%), Gaps = 23/269 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ DV G LWS+ YL P+ E H D++R+GADI+ +S YQA V
Sbjct: 15 ILDGALGTELENRG-HDVSGK-LWSAKYLLENPQIIQELHEDYLRSGADIVTTSSYQATV 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGP 126
L G SE+EALD + +V+L +A+ ++ + D + + L+ G +GP
Sbjct: 73 QGLEDYGLSEKEALDTIALTVELAKNARQNFWQSLSDDEKKKRVYPLIAG------DVGP 126
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
Y L DGSEY+G Y +++ +HR ++ L+ AG D+LA+ETIP EA ALV+L
Sbjct: 127 YAAYLADGSEYTGDY--QLSKESFKDFHRSRIQTLLAAGSDFLAIETIPNMTEATALVEL 184
Query: 187 LR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
L EFP +A++SF+ +D S G L++ C + QI A G+NC RP+ +S L+
Sbjct: 185 LADEFPDTEAYMSFTAQDSQSISDGTLMTEVAKLC--DSSKQILAFGINCSRPAIISDLL 242
Query: 246 ---RCIKQSHPTVQTIVYPNKGVKLLDGS 271
R I Q P V YPN G ++ DG+
Sbjct: 243 KASRTISQ-KPLV---TYPNSG-EIYDGA 266
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 149/312 (47%), Gaps = 27/312 (8%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ DV G LWS+ YL P+ E H D++R + + TV
Sbjct: 15 ILDGALGTELENRG-HDVSGK-LWSAKYLLENPQIIQELHEDYLRSGADIVTTSSYQATV 72
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALI-----KPSISSQTAASIG 381
G E G ++E + + VE A ++ + K + A +G
Sbjct: 73 --QGLEDYG-----LSEKEALDTIALTVELAKNARQNFWQSLSDDEKKKRVYPLIAGDVG 125
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PY L DGSEY+G Y +++ +HR ++ L+ AG D+LA+ETIP EA ALV+
Sbjct: 126 PYAAYLADGSEYTGDY--QLSKESFKDFHRSRIQTLLAAGSDFLAIETIPNMTEATALVE 183
Query: 442 LLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 500
LL EFP +A++SF+ +D S G L++ C + QI A G+NC RP+ +S L
Sbjct: 184 LLADEFPDTEAYMSFTAQDSQSISDGTLMTEVAKLC--DSSKQILAFGINCSRPAIISDL 241
Query: 501 V---RCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQ-WLEEGVNIIGG 556
+ R I Q P V YPN G ++D W D L Q W + I+GG
Sbjct: 242 LKASRTISQ-KPLV---TYPNSGEIYDGATQTWKSLPDNSHTLCENSQVWHKLSAKIVGG 297
Query: 557 CCEVTSYEIQQM 568
CC +I+ +
Sbjct: 298 CCRTRPEDIKLL 309
>gi|402844823|ref|ZP_10893172.1| homocysteine S-methyltransferase [Klebsiella sp. OBRC7]
gi|402272998|gb|EJU22208.1| homocysteine S-methyltransferase [Klebsiella sp. OBRC7]
Length = 310
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 159/322 (49%), Gaps = 17/322 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + K LLDG+ +++ D LWS+ L PE E H
Sbjct: 1 MSQNNPL--TALLEAKPFILLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T + ++ +D LI +VE +A YLA
Sbjct: 57 DYFRAGAQVAITASYQATP----AGFAARGLDEAQSKTLIG---KSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G Y+ S + + A+HRP VEAL+ AG D LA
Sbjct: 110 NPLAGALLVAGSVGPYGAFLADGSEYRGDYLRS--DEEFQAFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P E AL +LL +P +AW SF+ +D H S G + V +LAN Q+ A+
Sbjct: 168 ETMPNFAEMKALAELLTAYPRARAWFSFTLRDAQHLSDGTPLREVVG--VLANYPQVVAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQW 546
G+NC+ + + + + S + +VYPN G +D V W + + L Y+PQW
Sbjct: 226 GINCIALENTTAALAHL-HSLTALPLVVYPNSGEHYDPVSKSWHHHGEACATLAEYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
L G +IGGCC T +I ++
Sbjct: 285 LAAGAKLIGGCCRTTPQDIAEL 306
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 132/256 (51%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L PE E H D+ RAGA + ++ YQA
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHLDYFRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A++ N L G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSKTLIGKSVELARKAREAYLAE---------NPLAGALLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y+ S + + A+HRP VEAL+ AG D LA ET+P E AL +LL
Sbjct: 127 AFLADGSEYRGDYLRS--DEEFQAFHRPRVEALLDAGADLLACETMPNFAEMKALAELLT 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+P +AW SF+ +D H S G + V +LAN Q+ A+G+NC+ + + + +
Sbjct: 185 AYPRARAWFSFTLRDAQHLSDGTPLREVVG--VLANYPQVVALGINCIALENTTAALAHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S + +VYPN G
Sbjct: 243 -HSLTALPLVVYPNSG 257
>gi|296269295|ref|YP_003651927.1| homocysteine S-methyltransferase [Thermobispora bispora DSM 43833]
gi|296092082|gb|ADG88034.1| homocysteine S-methyltransferase [Thermobispora bispora DSM 43833]
Length = 288
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 124/234 (52%), Gaps = 27/234 (11%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQ 90
LWS+ L P + H D+ AGAD+ ++ YQA++ + G + EA DLL +V+
Sbjct: 25 LWSARLLIENPGIIRKAHLDYFAAGADVATTASYQASIPGFVRRGLTPGEARDLLRLAVR 84
Query: 91 LMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADL 150
L A+D+ GH AAS+GPYG L +G+EY+G Y + E L
Sbjct: 85 LAVEARDE----------------AGHGLVAASVGPYGAYLANGAEYTGAY--DLGEDGL 126
Query: 151 IAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG 210
AWHR E L AG D +A ETIP+ EA A+ +LLR P +AW+SFSC+DD H + G
Sbjct: 127 FAWHRERFEILASAGADLVAFETIPSFPEACAVARLLRLAPEVRAWVSFSCRDDRHINDG 186
Query: 211 ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+ V L + Q+ A+GVNC P H+ L+R + IVYPN G
Sbjct: 187 TPFAECVA--LFSGMPQVVAVGVNCTPPRHIPGLIRAGAR-------IVYPNSG 231
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 108/198 (54%), Gaps = 11/198 (5%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
AAS+GPYG L +G+EY+G Y + E L AWHR E L AG D +A ETIP+ EA
Sbjct: 99 AASVGPYGAYLANGAEYTGAY--DLGEDGLFAWHRERFEILASAGADLVAFETIPSFPEA 156
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
A+ +LLR P +AW+SFSC+DD H + G + V L + Q+ A+GVNC P H
Sbjct: 157 CAVARLLRLAPEVRAWVSFSCRDDRHINDGTPFAECVA--LFSGMPQVVAVGVNCTPPRH 214
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556
+ L+R + IVYPN G WD V +W T D S +W G IGG
Sbjct: 215 IPGLIRAGAR-------IVYPNSGEAWDPVGRRWTGTSDPVSFGRAAVEWRALGATHIGG 267
Query: 557 CCEVTSYEIQQMRIMIDE 574
CC T I+++R + E
Sbjct: 268 CCRTTPAHIREIRARLAE 285
>gi|432856044|ref|XP_004068342.1| PREDICTED: homocysteine S-methyltransferase 2-like [Oryzias
latipes]
Length = 320
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 105/258 (40%), Positives = 141/258 (54%), Gaps = 17/258 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +++ H + + G PLWS+ L T P+A + H F+ +GAD+I ++ YQA+V
Sbjct: 18 ILDGGLATELEAHGAQ-LQGDPLWSARLLHTNPKAIKDAHHRFLLSGADVITTATYQASV 76
Query: 69 DNL-TKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPY 127
T LG S + A +LL V L + K F A SIG Y
Sbjct: 77 QGFVTHLGMSAERAKELLMSGVHLAR------------EVVKNFGSGNTGPLVAGSIGSY 124
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L D SEY+G + + MT +L WHRP VE L+ AG D LA ETIP+ KEA A+V+LL
Sbjct: 125 GAYLHDTSEYTGTFAEKMTVDELKDWHRPQVEGLLAAGADLLAFETIPSIKEADAVVELL 184
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV-R 246
REFP AWLSFS KD+T S G + AV + + Q+ A+GVNC P+ V L+
Sbjct: 185 REFPDSSAWLSFSVKDETRISDGSPFAEAVR--VASRSAQLLAVGVNCCSPTVVEPLLDS 242
Query: 247 CIKQSHPTVQTIVYPNKG 264
Q P + +VYPN G
Sbjct: 243 ASSQLSPDMSWVVYPNSG 260
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 162/313 (51%), Gaps = 25/313 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG +++ H + + G PLWS+ L T P+A + H F+ + +
Sbjct: 18 ILDGGLATELEAHGAQ-LQGDPLWSARLLHTNPKAIKDAHHRFLLSGADVITT------- 69
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA--LIKPSISSQT----AASI 380
+ Y +T + A + L+ +GV +LA ++K S T A SI
Sbjct: 70 ----ATYQASVQGFVTHLGMSA---ERAKELLMSGV-HLAREVVKNFGSGNTGPLVAGSI 121
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
G YG L D SEY+G + + MT +L WHRP VE L+ AG D LA ETIP+ KEA A+V
Sbjct: 122 GSYGAYLHDTSEYTGTFAEKMTVDELKDWHRPQVEGLLAAGADLLAFETIPSIKEADAVV 181
Query: 441 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 500
+LLREFP AWLSFS KD+T S G + AV + + Q+ A+GVNC P+ V L
Sbjct: 182 ELLREFPDSSAWLSFSVKDETRISDGSPFAEAVR--VASRSAQLLAVGVNCCSPTVVEPL 239
Query: 501 V-RCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
+ Q P + +VYPN G +DS E I +W+++G +IGGCC
Sbjct: 240 LDSASSQLSPDMSWVVYPNSGWEYDSQQGWQARGESSIWIPELSRRWVKQGAALIGGCCC 299
Query: 560 VTSYEIQQMRIMI 572
++ EI ++R ++
Sbjct: 300 ISPAEIAELRKVL 312
>gi|423101510|ref|ZP_17089212.1| homocysteine S-methyltransferase [Klebsiella oxytoca 10-5242]
gi|376391298|gb|EHT03977.1| homocysteine S-methyltransferase [Klebsiella oxytoca 10-5242]
Length = 310
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 159/322 (49%), Gaps = 17/322 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T++ K LLDG+ +++ D LWS+ L PE E H
Sbjct: 1 MSQNNPL--TVLLEAKPFILLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T + ++ +D LI +VE +A YLA
Sbjct: 57 DYFRAGAQVAITASYQATP----AGFAARGLDEAQSKTLIG---KSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G Y+ S + + A+HRP VEAL+ AG D LA
Sbjct: 110 NPLAGALLVAGSVGPYGAFLADGSEYRGDYLRS--DEEFQAFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P E AL +LL +P +AW SF+ D H S G + V +LAN Q+ A+
Sbjct: 168 ETMPNFAEMKALAELLTAYPRARAWFSFTLHDAQHLSDGTPLREVVG--VLANYPQVVAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQW 546
G+NC+ + + + + S + +VYPN G +D V W + + L Y+PQW
Sbjct: 226 GINCIALENTTAALAHL-HSLTALPLVVYPNSGEHYDPVSKSWHHHGEACATLAEYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
L G +IGGCC T +I ++
Sbjct: 285 LAAGAKLIGGCCRTTPQDIAEL 306
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 131/256 (51%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L PE E H D+ RAGA + ++ YQA
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHLDYFRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A++ N L G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSKTLIGKSVELARKAREAYLAE---------NPLAGALLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y+ S + + A+HRP VEAL+ AG D LA ET+P E AL +LL
Sbjct: 127 AFLADGSEYRGDYLRS--DEEFQAFHRPRVEALLDAGADLLACETMPNFAEMKALAELLT 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+P +AW SF+ D H S G + V +LAN Q+ A+G+NC+ + + + +
Sbjct: 185 AYPRARAWFSFTLHDAQHLSDGTPLREVVG--VLANYPQVVALGINCIALENTTAALAHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S + +VYPN G
Sbjct: 243 -HSLTALPLVVYPNSG 257
>gi|354722220|ref|ZP_09036435.1| homocysteine methyltransferase [Enterobacter mori LMG 25706]
Length = 310
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 160/322 (49%), Gaps = 17/322 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + + +LDG+ +++ D LWS+ L P+ E H
Sbjct: 1 MSQNNPL--TALLEKQPFVVLDGAMATELEARGCNLADS--LWSAKVLVENPDLIREVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + EA A +VE +A YLA
Sbjct: 57 DYYRAGAQVAITASYQATP-------AGFSARGLDEAQSRALIGKSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G YV S E +H P VEAL+ AG D LA
Sbjct: 110 NPHAGTLLVAGSVGPYGAYLADGSEYRGDYVRSAQE--FTTFHHPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P+ +E AL LL E+P +AW SF+ +D H S G + V+ +LAN I A+
Sbjct: 168 ETLPSFEEIKALAALLSEYPRARAWFSFTLRDSEHLSDGTPLREVVS--VLANSPHIVAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQW 546
G+NC+ + + ++ + QS + +VYPN G +D+V W E ++ ++PQW
Sbjct: 226 GINCIALENTTAALKHL-QSLTALPLVVYPNSGEHYDAVTKTWHHHGEACETLAGFLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
L G +IGGCC T +I ++
Sbjct: 285 LAAGAKLIGGCCRTTPKDIAEL 306
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 133/256 (51%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L P+ E H D+ RAGA + ++ YQA
Sbjct: 18 VLDGAMATELEARGCNLADS--LWSAKVLVENPDLIREVHLDYYRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFSARGLDEAQSRALIGKSVELARKAREAYLAE---------NPHAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV S E +H P VEAL+ AG D LA ET+P+ +E AL LL
Sbjct: 127 AYLADGSEYRGDYVRSAQE--FTTFHHPRVEALLDAGADLLACETLPSFEEIKALAALLS 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E+P +AW SF+ +D H S G + V+ +LAN I A+G+NC+ + + ++ +
Sbjct: 185 EYPRARAWFSFTLRDSEHLSDGTPLREVVS--VLANSPHIVALGINCIALENTTAALKHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
QS + +VYPN G
Sbjct: 243 -QSLTALPLVVYPNSG 257
>gi|317049224|ref|YP_004116872.1| homocysteine S-methyltransferase [Pantoea sp. At-9b]
gi|316950841|gb|ADU70316.1| homocysteine S-methyltransferase [Pantoea sp. At-9b]
Length = 311
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 149/299 (49%), Gaps = 14/299 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D LWS+ L PE + H D+ A + T
Sbjct: 17 ILDGALATELEARGCNLADT--LWSAKVLMENPELIYQVHYDYFAAGAHCAITASYQATP 74
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
G + EA A + + RA DY A + A SIGPYG
Sbjct: 75 -------QGFAQRGLDEAQSRALIQQSAALAQRARDDYRAASGTNAPLLVAGSIGPYGAF 127
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L +G+EY G Y ++ A++ A+HRP V AL+ AGVD LA ET+P+ EA ALV LL EF
Sbjct: 128 LANGAEYRGDY--ALPAAEMKAFHRPRVAALLEAGVDLLACETLPSFAEAQALVSLLAEF 185
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P AW SF+ +D H S G +S+ V + L A+P Q+ A+G+NCV +V+ +R + Q
Sbjct: 186 PDSSAWFSFTLRDANHISDGTPLST-VAALLNASP-QVVAVGINCVALENVTPALRSL-Q 242
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
+ T +VYPN G +D+ W ++ P+W + G +IGGCC T +I
Sbjct: 243 ALCTQPLLVYPNSGEQYDATSKTWHSAPSGCTLHDKFPEWQQAGARLIGGCCRTTPQDI 301
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 136/256 (53%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE + H D+ AGA ++ YQA
Sbjct: 17 ILDGALATELEARGCNLADT--LWSAKVLMENPELIYQVHYDYFAAGAHCAITASYQATP 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G E ++ L+ +S L A+D N + A SIGPYG
Sbjct: 75 QGFAQRGLDEAQSRALIQQSAALAQRARDDYRAASGTN---------APLLVAGSIGPYG 125
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L +G+EY G Y ++ A++ A+HRP V AL+ AGVD LA ET+P+ EA ALV LL
Sbjct: 126 AFLANGAEYRGDY--ALPAAEMKAFHRPRVAALLEAGVDLLACETLPSFAEAQALVSLLA 183
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP AW SF+ +D H S G +S+ V + L A+P Q+ A+G+NCV +V+ +R +
Sbjct: 184 EFPDSSAWFSFTLRDANHISDGTPLST-VAALLNASP-QVVAVGINCVALENVTPALRSL 241
Query: 249 KQSHPTVQTIVYPNKG 264
Q+ T +VYPN G
Sbjct: 242 -QALCTQPLLVYPNSG 256
>gi|386078276|ref|YP_005991801.1| homocysteine S-methyltransferase MmuM [Pantoea ananatis PA13]
gi|354987457|gb|AER31581.1| homocysteine S-methyltransferase MmuM [Pantoea ananatis PA13]
Length = 311
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 155/322 (48%), Gaps = 30/322 (9%)
Query: 246 RCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVET 305
R ++QS P + LDG+ +++ D LWS+ L PE +
Sbjct: 8 RALQQSAPLI------------LDGALATELEARGCDLADA--LWSAKVLVENPELIYQV 53
Query: 306 HRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL 365
H D+ A + T G + E +A +VE RA DYL
Sbjct: 54 HYDYFAAGARCAITASYQATP-------QGFAARGLNETQSLALIAQSVELAKRARADYL 106
Query: 366 ALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL 425
A + A S+GPYG L DGSEY G Y ++ EA+++A+HRP + AL+ AGVD L
Sbjct: 107 ATQAEAKILLVAGSVGPYGAFLADGSEYRGDY--ALPEAEMMAFHRPRINALLTAGVDVL 164
Query: 426 ALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ 485
A ET+P+ EA ALV LL EFP +AW SF+ +D H S G + V + L A P Q+
Sbjct: 165 ACETLPSFAEAQALVALLGEFPDSRAWFSFTLRDAEHISDGTPLRE-VAAYLNAQP-QVV 222
Query: 486 AIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYV 543
A+G+NC+ V+ ++ +++ P V VYPN G +D+ W ++
Sbjct: 223 ALGINCIALESVTPALQQLQRLTDKPLV---VYPNSGEQYDASSKTWHSAPSGCTLHDKF 279
Query: 544 PQWLEEGVNIIGGCCEVTSYEI 565
+W + G +IGGCC + +I
Sbjct: 280 SEWQQAGARLIGGCCRTSPKDI 301
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 138/258 (53%), Gaps = 20/258 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE + H D+ AGA ++ YQA
Sbjct: 17 ILDGALATELEARGCDLADA--LWSAKVLVENPELIYQVHYDYFAAGARCAITASYQATP 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G +E ++L L+ +SV+L A+ T L+ G S+GPYG
Sbjct: 75 QGFAARGLNETQSLALIAQSVELAKRARADYLAT---QAEAKILLVAG------SVGPYG 125
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y ++ EA+++A+HRP + AL+ AGVD LA ET+P+ EA ALV LL
Sbjct: 126 AFLADGSEYRGDY--ALPEAEMMAFHRPRINALLTAGVDVLACETLPSFAEAQALVALLG 183
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP +AW SF+ +D H S G + V + L A P Q+ A+G+NC+ V+ ++ +
Sbjct: 184 EFPDSRAWFSFTLRDAEHISDGTPLRE-VAAYLNAQP-QVVALGINCIALESVTPALQQL 241
Query: 249 KQ--SHPTVQTIVYPNKG 264
++ P V VYPN G
Sbjct: 242 QRLTDKPLV---VYPNSG 256
>gi|171778308|ref|ZP_02919514.1| hypothetical protein STRINF_00356 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171283008|gb|EDT48432.1| homocysteine S-methyltransferase [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 314
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 152/269 (56%), Gaps = 23/269 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ DV G LWS+ YL P+ E H D++R+GADI+ +S YQA V
Sbjct: 15 ILDGALGTELENRG-HDVSGK-LWSAKYLLENPQIIQELHEDYLRSGADIVTTSSYQATV 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGP 126
L G SE+EALD + +V+L +A+ ++ + D + + L+ G +GP
Sbjct: 73 QGLEDYGLSEKEALDTIVLTVELAKNARQNFWQSLSDDEKKKRVYPLIAG------DVGP 126
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
Y L DGSEY+G Y +++ +HR ++ L+ AG D+LA+ETIP EA ALV+L
Sbjct: 127 YAAYLADGSEYTGDY--QLSKESFKDFHRSRIQTLLAAGSDFLAIETIPNMTEATALVEL 184
Query: 187 LR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
L EFP +A++SF+ +D S G L++ C + QI A G+NC RP+ +S L+
Sbjct: 185 LADEFPDTEAYMSFTAQDSQSISDGTLMTEVAKLC--DSSKQILAFGINCSRPAIISDLL 242
Query: 246 ---RCIKQSHPTVQTIVYPNKGVKLLDGS 271
R I Q P V YPN G ++ DG+
Sbjct: 243 KASRTISQ-KPLV---TYPNSG-EIYDGA 266
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 150/312 (48%), Gaps = 27/312 (8%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ DV G LWS+ YL P+ E H D++R + + TV
Sbjct: 15 ILDGALGTELENRG-HDVSGK-LWSAKYLLENPQIIQELHEDYLRSGADIVTTSSYQATV 72
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALI-----KPSISSQTAASIG 381
G E G ++E + + VE A ++ + K + A +G
Sbjct: 73 --QGLEDYG-----LSEKEALDTIVLTVELAKNARQNFWQSLSDDEKKKRVYPLIAGDVG 125
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PY L DGSEY+G Y +++ +HR ++ L+ AG D+LA+ETIP EA ALV+
Sbjct: 126 PYAAYLADGSEYTGDY--QLSKESFKDFHRSRIQTLLAAGSDFLAIETIPNMTEATALVE 183
Query: 442 LLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 500
LL EFP +A++SF+ +D S G L++ C + QI A G+NC RP+ +S L
Sbjct: 184 LLADEFPDTEAYMSFTAQDSQSISDGTLMTEVAKLC--DSSKQILAFGINCSRPAIISDL 241
Query: 501 V---RCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQ-WLEEGVNIIGG 556
+ R I Q P V YPN G ++D W D L Q W + G I+GG
Sbjct: 242 LKASRTISQ-KPLV---TYPNSGEIYDGATQTWKSLPDNSHTLCENSQVWHKLGAKIVGG 297
Query: 557 CCEVTSYEIQQM 568
CC +I+ +
Sbjct: 298 CCRTRPEDIKLL 309
>gi|397166506|ref|ZP_10489950.1| homocysteine S-methyltransferase [Enterobacter radicincitans DSM
16656]
gi|396091594|gb|EJI89160.1| homocysteine S-methyltransferase [Enterobacter radicincitans DSM
16656]
Length = 310
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 152/303 (50%), Gaps = 15/303 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D LWS+ L P+ + H D+ R + A + T
Sbjct: 18 VLDGALATELEARGCNLADN--LWSAKVLMENPQIIRDVHLDYFRAGAQIAITASYQATP 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+G +TEA A +V+ A Y A + A S+GPYG
Sbjct: 76 -------AGFAARGLTEAQSKALIEQSVKLAKEASEIYRAENPNAGPLLVAGSVGPYGAY 128
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G YV S + +HRP +EAL+ AG D LA ET+P+ E AL LL E+
Sbjct: 129 LADGSEYRGDYVRSHEAFQV--FHRPRIEALLNAGADLLACETLPSFAEIKALADLLSEY 186
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P +AW SF+ +DD H S G ++ V + L A P QI A+G+NC+ S + ++ + Q
Sbjct: 187 PDVQAWFSFTLRDDKHLSDGTPLAE-VVNALSAYP-QIVALGINCIALSKTTAALKHL-Q 243
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNIIGGCCEVTSYEI 565
S + +VYPN G +D+V W D S+ ++PQWLE G +IGGCC T +I
Sbjct: 244 SLSALPLVVYPNSGETYDAVTKAWHVHGDTCGSLAAHLPQWLEAGARLIGGCCRTTPQDI 303
Query: 566 QQM 568
+
Sbjct: 304 SAL 306
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 136/256 (53%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L P+ + H D+ RAGA I ++ YQA
Sbjct: 18 VLDGALATELEARGCNLADN--LWSAKVLMENPQIIRDVHLDYFRAGAQIAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G +E ++ L+ +SV+L A + + + N G + A S+GPYG
Sbjct: 76 AGFAARGLTEAQSKALIEQSVKLAKEASE---------IYRAENPNAGPLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV S + +HRP +EAL+ AG D LA ET+P+ E AL LL
Sbjct: 127 AYLADGSEYRGDYVRSHEAFQV--FHRPRIEALLNAGADLLACETLPSFAEIKALADLLS 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E+P +AW SF+ +DD H S G ++ V + L A P QI A+G+NC+ S + ++ +
Sbjct: 185 EYPDVQAWFSFTLRDDKHLSDGTPLAE-VVNALSAYP-QIVALGINCIALSKTTAALKHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
QS + +VYPN G
Sbjct: 243 -QSLSALPLVVYPNSG 257
>gi|334128524|ref|ZP_08502412.1| homocysteine S-methyltransferase [Centipeda periodontii DSM 2778]
gi|333387201|gb|EGK58404.1| homocysteine S-methyltransferase [Centipeda periodontii DSM 2778]
Length = 308
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/259 (38%), Positives = 140/259 (54%), Gaps = 16/259 (6%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG+F +++ D LWS+ L P+ E H D++RAGAD++ S+ YQA
Sbjct: 13 VIVLDGAFATEIEARGFSVNDA--LWSAKALFERPDLVREVHLDYLRAGADVVTSASYQA 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
V+ K G+S++EA L+ KS+QL A D + N F AAS+GP
Sbjct: 71 TVEGFMKRGFSKEEAAALIQKSIQLAQEACDLYLAEREENGRVPF--------VAASVGP 122
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y + E L+A+H + L A D LA ET+P EA A+V++
Sbjct: 123 YGAYLADGSEYRGDY--GIDEDALVAFHAERLALLASAQPDLLACETLPCLVEARAIVRV 180
Query: 187 LREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
LRE + AW SFSC+D H S G I AV + L + AIG+NC P +V +L+
Sbjct: 181 LREKKIRIPAWFSFSCRDAAHISDGMEI--AVCARWLDTVPEAAAIGLNCTAPQYVESLI 238
Query: 246 RCIKQSHPTVQTIVYPNKG 264
I++ T +VYPN G
Sbjct: 239 GEIRR-ETTKPIVVYPNSG 256
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 147/306 (48%), Gaps = 18/306 (5%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V +LDG+F +++ D LWS+ L P+ E H D++R + S
Sbjct: 13 VIVLDGAFATEIEARGFSVNDA--LWSAKALFERPDLVREVHLDYLRAGADVVTSASYQA 70
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-TAASIGPY 383
TV G ++ + A + +++ A YLA + + AAS+GPY
Sbjct: 71 TV-------EGFMKRGFSKEEAAALIQKSIQLAQEACDLYLAEREENGRVPFVAASVGPY 123
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L DGSEY G Y + E L+A+H + L A D LA ET+P EA A+V++L
Sbjct: 124 GAYLADGSEYRGDY--GIDEDALVAFHAERLALLASAQPDLLACETLPCLVEARAIVRVL 181
Query: 444 REFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
RE + AW SFSC+D H S G I AV + L + AIG+NC P +V +L+
Sbjct: 182 REKKIRIPAWFSFSCRDAAHISDGMEI--AVCARWLDTVPEAAAIGLNCTAPQYVESLIG 239
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTS 562
I++ T +VYPN G +D+ W +++ + +W G +IGGCC T
Sbjct: 240 EIRR-ETTKPIVVYPNSGETYDASDKSWHGAAEDFGTI--ARRWRTAGARLIGGCCRTTP 296
Query: 563 YEIQQM 568
EI +
Sbjct: 297 REIADI 302
>gi|403511218|ref|YP_006642856.1| homocysteine S-methyltransferase [Nocardiopsis alba ATCC BAA-2165]
gi|402802582|gb|AFR09992.1| homocysteine S-methyltransferase [Nocardiopsis alba ATCC BAA-2165]
Length = 311
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 130/257 (50%), Gaps = 23/257 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG +++ + +D+ G LWS+ L EPE HRD+ AGAD+ ++ YQA+V
Sbjct: 19 VVDGGLATRLEAYG-RDLGGG-LWSARLLAEEPELIARVHRDYFEAGADVAIAAGYQASV 76
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
LGYS + AL+ + +SV+L +D G AA +GPYG
Sbjct: 77 AGFVSLGYSRRRALESIARSVELAVGERDA----------------FGSGLVAAGVGPYG 120
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
DGSEY+G Y + E L WHR L AG D +A ET+P+ EA AL +L
Sbjct: 121 AARADGSEYTGDY--DLDEEGLYRWHRERWNVLTDAGADLVACETLPSLAEARALARLTL 178
Query: 189 EFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
E PG + W SFSC D S G L A L ++ A+GVNCV P HV +LVR
Sbjct: 179 ETPGARVWFSFSCSDGERISDGTPLREVAAELAPLRESGRLVAVGVNCVPPRHVPSLVRA 238
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + + + YPN G
Sbjct: 239 VASAG--LPAVAYPNSG 253
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 145/314 (46%), Gaps = 23/314 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
++DG +++ + +D+ G LWS+ L EPE HRD+ + A + G +V
Sbjct: 19 VVDGGLATRLEAYG-RDLGGG-LWSARLLAEEPELIARVHRDYFEAGADVAIAAGYQASV 76
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-TAASIGPYGT 385
+V L R +E++ R+ V+ + + S AA +GPYG
Sbjct: 77 A--------GFVS------LGYSRRRALESIARS-VELAVGERDAFGSGLVAAGVGPYGA 121
Query: 386 VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE 445
DGSEY+G Y + E L WHR L AG D +A ET+P+ EA AL +L E
Sbjct: 122 ARADGSEYTGDY--DLDEEGLYRWHRERWNVLTDAGADLVACETLPSLAEARALARLTLE 179
Query: 446 FPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 504
PG + W SFSC D S G L A L ++ A+GVNCV P HV +LVR +
Sbjct: 180 TPGARVWFSFSCSDGERISDGTPLREVAAELAPLRESGRLVAVGVNCVPPRHVPSLVRAV 239
Query: 505 KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYE 564
+ + + YPN G WD+ W + + W EG ++GGCC
Sbjct: 240 ASAG--LPAVAYPNSGEGWDAARGVWTGSGESERFGEAAVSWCREGAVLVGGCCRTGPEH 297
Query: 565 IQQMRIMIDEFNTK 578
++ +R +++ +
Sbjct: 298 VRAVREALEDAGLR 311
>gi|421725054|ref|ZP_16164255.1| homocysteine methyltransferase [Klebsiella oxytoca M5al]
gi|410374136|gb|EKP28816.1| homocysteine methyltransferase [Klebsiella oxytoca M5al]
Length = 310
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 157/322 (48%), Gaps = 17/322 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + + LLDG+ +++ D LWS+ L PE E H
Sbjct: 1 MSQNNPL--TALLDARPFILLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + EA A +VE +A YLA
Sbjct: 57 DYFRAGAQVAITASYQATP-------AGFAARGLDEAQSKALIGKSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G Y+ S E A+HRP VEAL+ AG D LA
Sbjct: 110 NPQAGALLVAGSVGPYGAYLADGSEYRGDYLRSHEE--FQAFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P E AL +LL +P +AW SF+ +D H S G + + +LAN Q+ A+
Sbjct: 168 ETLPNFAEIKALAELLTAYPRARAWFSFTLRDAQHLSDGTPLREVIG--VLANYPQVVAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILH-YVPQW 546
G+NC+ + + + + S + +VYPN G +D V W + + L Y+PQW
Sbjct: 226 GINCIALENTTAALAHL-HSLTALPLVVYPNSGEHYDPVSKTWHHHGEACATLAGYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
L G +IGGCC T +I ++
Sbjct: 285 LAAGAKLIGGCCRTTPKDIAEL 306
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 130/256 (50%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L PE E H D+ RAGA + ++ YQA
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHLDYFRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSKALIGKSVELARKAREAYLAE---------NPQAGALLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y+ S E A+HRP VEAL+ AG D LA ET+P E AL +LL
Sbjct: 127 AYLADGSEYRGDYLRSHEE--FQAFHRPRVEALLDAGADLLACETLPNFAEIKALAELLT 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+P +AW SF+ +D H S G + + +LAN Q+ A+G+NC+ + + + +
Sbjct: 185 AYPRARAWFSFTLRDAQHLSDGTPLREVIG--VLANYPQVVALGINCIALENTTAALAHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S + +VYPN G
Sbjct: 243 -HSLTALPLVVYPNSG 257
>gi|401678749|ref|ZP_10810705.1| homocysteine methyltransferase [Enterobacter sp. SST3]
gi|400213990|gb|EJO44920.1| homocysteine methyltransferase [Enterobacter sp. SST3]
Length = 310
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 164/322 (50%), Gaps = 17/322 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + + +LDG+ +++ D LWS+ L PE E H
Sbjct: 1 MSQNNPL--TALLEKQPFVVLDGAMATELEARGCNLADS--LWSAKVLMENPELIREVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T + ++ +D LI +VE +A YLA
Sbjct: 57 DYYRAGAQVAITASYQATP----AGFAARGLDEAQSRTLIGR---SVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G YV S EA A+HRP VEAL+ AG D LA
Sbjct: 110 NPHAGTLLVAGSVGPYGAYLADGSEYRGDYVRS-AEA-FTAFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P+ E AL LL +P +AW SF+ +D H S G + V+ +LA+ I A+
Sbjct: 168 ETLPSFAEIKALAALLAGYPRARAWFSFTLRDSEHLSDGTPLRDVVS--VLADSPHIVAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQW 546
G+NC+ + + ++ + QS ++ +VYPN G +D+V W E ++ Y+PQW
Sbjct: 226 GINCIALENTTAALKHL-QSLTSLPLVVYPNSGEHYDAVTKTWHHHGEACETLAGYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
L+ G +IGGCC T +I ++
Sbjct: 285 LDAGAKLIGGCCRTTPKDIAEL 306
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 134/256 (52%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE E H D+ RAGA + ++ YQA
Sbjct: 18 VLDGAMATELEARGCNLADS--LWSAKVLMENPELIREVHLDYYRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ +SV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSRTLIGRSVELARKAREAYLAE---------NPHAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV S EA A+HRP VEAL+ AG D LA ET+P+ E AL LL
Sbjct: 127 AYLADGSEYRGDYVRS-AEA-FTAFHRPRVEALLDAGADLLACETLPSFAEIKALAALLA 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+P +AW SF+ +D H S G + V+ +LA+ I A+G+NC+ + + ++ +
Sbjct: 185 GYPRARAWFSFTLRDSEHLSDGTPLRDVVS--VLADSPHIVALGINCIALENTTAALKHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
QS ++ +VYPN G
Sbjct: 243 -QSLTSLPLVVYPNSG 257
>gi|407702888|ref|YP_006816036.1| homocysteine methyltransferase [Bacillus thuringiensis MC28]
gi|407387303|gb|AFU17797.1| homocysteine methyltransferase [Bacillus thuringiensis MC28]
Length = 325
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 143/259 (55%), Gaps = 16/259 (6%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ H D PLWS+ L PE + H D+ RAGAD ++ YQA
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQA 74
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G EQEAL+L+ K+V L A+D + + N+ L+ AS+GP
Sbjct: 75 TISGFSARGIQEQEALELIKKTVLLARRARD-DFWKGNTQTNRPKPLVV------ASVGP 127
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G+Y +T+ L +HR + AL+ AG + LA ETIP+ +EA L L
Sbjct: 128 YGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGANLLAFETIPSLQEARVLDTL 185
Query: 187 LREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
LREFP AWLSFS K++ S G +L+ A +QI AIG+NC + V+ +
Sbjct: 186 LREFPETYAWLSFSLKNEKEISEGMKLVECARA---FEKSEQIVAIGINCAPVTVVTGAI 242
Query: 246 RCIKQSHPTVQTIVYPNKG 264
+ ++ ++ IVYPN G
Sbjct: 243 QELR-ANTKKPIIVYPNSG 260
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 152/311 (48%), Gaps = 26/311 (8%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG+ +++ H D PLWS+ L PE + H D+ R + A +
Sbjct: 17 IMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQA 74
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA------LIKPSISSQTAA 378
T+ SG + E + + + V RA D+ KP + A
Sbjct: 75 TI-------SGFSARGIQEQEALELIKKTVLLARRARDDFWKGNTQTNRPKPLV----VA 123
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG L DGSEY G+Y +T+ L +HR + AL+ AG + LA ETIP+ +EA
Sbjct: 124 SVGPYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGANLLAFETIPSLQEARV 181
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
L LLREFP AWLSFS K++ S G +L+ A +QI AIG+NC + V
Sbjct: 182 LDTLLREFPETYAWLSFSLKNEKEISEGMKLVECARA---FEKSEQIVAIGINCAPVTVV 238
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
+ ++ ++ ++ IVYPN G ++ W E S+ +W + G +IGGC
Sbjct: 239 TGAIQELR-ANTKKPIIVYPNSGETYNPETKTWHGHEQCNSLDIQSEEWYQAGARLIGGC 297
Query: 558 CEVTSYEIQQM 568
C T Y I+++
Sbjct: 298 CRTTPYHIEEI 308
>gi|293395015|ref|ZP_06639302.1| homocysteine S-methyltransferase [Serratia odorifera DSM 4582]
gi|291422422|gb|EFE95664.1| homocysteine S-methyltransferase [Serratia odorifera DSM 4582]
Length = 318
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 156/306 (50%), Gaps = 21/306 (6%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGT- 325
+LDG+ +++ D PLWS+ L PE + H D+ + A + T
Sbjct: 23 ILDGALATELETRGCDLSD--PLWSAKVLIENPELIYQVHLDYFNAGAQCAITASYQATP 80
Query: 326 --VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPY 383
LR G +D LIA +V+ +A DYLA + A S+GPY
Sbjct: 81 QGFLRRG-------LDEQQSLALIA---KSVQLAQQARRDYLAQRPQAEPLLIAGSVGPY 130
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L DGSEY G Y + A++IA+HRP + AL +AGVD LA ET+P+ E AL+ LL
Sbjct: 131 GAFLADGSEYRGDY--RLPAAEMIAFHRPRIAALAQAGVDLLACETLPSFDELHALLTLL 188
Query: 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
R+FP AW SF+ +D H S G ++ + LL + Q+ AIGVNC+ +V+ ++
Sbjct: 189 RDFPSLGAWFSFTLRDSHHLSDGTPLTEVIA--LLNHNPQVLAIGVNCIALENVTPALQT 246
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNIIGGCCEVTS 562
+ + ++ +VYPN G +D+V W EY S+ W + G +IGGCC T
Sbjct: 247 LA-TLTSLPLLVYPNSGEHYDAVSKTWHACGGEYGSLSEQAGDWQQIGARLIGGCCRTTP 305
Query: 563 YEIQQM 568
+I+ +
Sbjct: 306 KDIRAI 311
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 139/257 (54%), Gaps = 18/257 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D PLWS+ L PE + H D+ AGA ++ YQA
Sbjct: 23 ILDGALATELETRGCDLSD--PLWSAKVLIENPELIYQVHLDYFNAGAQCAITASYQATP 80
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASIGPY 127
+ G EQ++L L+ KSVQL A+ D Q P + A S+GPY
Sbjct: 81 QGFLRRGLDEQQSLALIAKSVQLAQQARRDYLAQRPQAE----------PLLIAGSVGPY 130
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y + A++IA+HRP + AL +AGVD LA ET+P+ E AL+ LL
Sbjct: 131 GAFLADGSEYRGDY--RLPAAEMIAFHRPRIAALAQAGVDLLACETLPSFDELHALLTLL 188
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
R+FP AW SF+ +D H S G ++ + LL + Q+ AIGVNC+ +V+ ++
Sbjct: 189 RDFPSLGAWFSFTLRDSHHLSDGTPLTEVIA--LLNHNPQVLAIGVNCIALENVTPALQT 246
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + ++ +VYPN G
Sbjct: 247 LA-TLTSLPLLVYPNSG 262
>gi|398797861|ref|ZP_10557171.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Pantoea sp. GM01]
gi|398101758|gb|EJL91964.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Pantoea sp. GM01]
Length = 311
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 136/256 (53%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE + H D+ AGA + ++ YQA
Sbjct: 17 ILDGALATELEARGCNLADA--LWSAKVLMENPELIYQVHHDYFAAGAHVAITASYQATP 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E +AL L+ +SVQL A+D + + T + A S+GPYG
Sbjct: 75 QGFAARGLDEAQALALIKQSVQLAQRARDD---------YRASSASTAPLLVAGSVGPYG 125
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L +G+EY G Y ++ E ++ A+HRP V+AL++AGVD LA ET+P+ EA AL+ LL
Sbjct: 126 AFLANGAEYRGDY--ALPEEEMKAFHRPRVKALLQAGVDLLACETLPSFAEAQALISLLA 183
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP AW SF+ +D H S G +S L+ Q+ AIG+NCV V+ +R +
Sbjct: 184 EFPDSSAWFSFTLRDAEHISDGTPLSQVAE--LVNGAPQVVAIGINCVALESVTPALRSL 241
Query: 249 KQSHPTVQTIVYPNKG 264
Q+ +VYPN G
Sbjct: 242 -QAQSDKPLLVYPNSG 256
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 154/318 (48%), Gaps = 24/318 (7%)
Query: 252 HPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIR 311
+P Q + + + +LDG+ +++ D LWS+ L PE + H D+
Sbjct: 4 NPIAQALTHTD--TLILDGALATELEARGCNLADA--LWSAKVLMENPELIYQVHHDYFA 59
Query: 312 G--HIETAAS--IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
H+ AS P G R + EA +A + +V+ RA DY A
Sbjct: 60 AGAHVAITASYQATPQGFAAR-----------GLDEAQALALIKQSVQLAQRARDDYRAS 108
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ A S+GPYG L +G+EY G Y ++ E ++ A+HRP V+AL++AGVD LA
Sbjct: 109 SASTAPLLVAGSVGPYGAFLANGAEYRGDY--ALPEEEMKAFHRPRVKALLQAGVDLLAC 166
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P+ EA AL+ LL EFP AW SF+ +D H S G +S L+ Q+ AI
Sbjct: 167 ETLPSFAEAQALISLLAEFPDSSAWFSFTLRDAEHISDGTPLSQVAE--LVNGAPQVVAI 224
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWL 547
G+NCV V+ +R + Q+ +VYPN G +D+ W ++ +W
Sbjct: 225 GINCVALESVTPALRSL-QAQSDKPLLVYPNSGEQYDASSKTWHSAPSGCTLHDKFHEWQ 283
Query: 548 EEGVNIIGGCCEVTSYEI 565
G +IGGCC T +I
Sbjct: 284 LAGARLIGGCCRTTPQDI 301
>gi|429085355|ref|ZP_19148331.1| Homocysteine S-methyltransferase [Cronobacter condimenti 1330]
gi|426545476|emb|CCJ74372.1| Homocysteine S-methyltransferase [Cronobacter condimenti 1330]
Length = 310
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 151/304 (49%), Gaps = 15/304 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D LWS+ L +PE H D+ + A + T
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIHAVHLDYFHAGAQCAITASYQATP 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+G + EA A +V +A D+LA + A S+GPYG
Sbjct: 76 -------AGFAARGLDEAQSRALIARSVALARQAREDFLATQPDAGPLLVAGSVGPYGAY 128
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y T+A+ +HRP +EAL+ AG D LA ET+P+ EA ALV LL E+
Sbjct: 129 LADGSEYRGDY--QRTQAEFADFHRPRMEALLEAGADVLACETLPSLAEARALVALLAEY 186
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P +AW SF+ +D H S G ++ V + LA+ QI A+G+NCV + + + +
Sbjct: 187 PQARAWFSFTLRDSEHISDGSPLADVVAA--LASSTQIVALGINCVALENTTAALSHLHA 244
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
P + +VYPN G +D+V W D +++ HY+ W G +IGGCC T +I
Sbjct: 245 LTP-LPLVVYPNSGEQYDAVSKTWRHDGHACHTLAHYLDDWRAAGAALIGGCCRTTPADI 303
Query: 566 QQMR 569
++
Sbjct: 304 AALK 307
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 133/257 (51%), Gaps = 18/257 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L +PE H D+ AGA ++ YQA
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIHAVHLDYFHAGAQCAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQT-PDINLNKTFNLLTGHIETAASIGPY 127
G E ++ L+ +SV L A++ T PD G + A S+GPY
Sbjct: 76 AGFAARGLDEAQSRALIARSVALARQAREDFLATQPD----------AGPLLVAGSVGPY 125
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y T+A+ +HRP +EAL+ AG D LA ET+P+ EA ALV LL
Sbjct: 126 GAYLADGSEYRGDY--QRTQAEFADFHRPRMEALLEAGADVLACETLPSLAEARALVALL 183
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
E+P +AW SF+ +D H S G ++ V + LA+ QI A+G+NCV + + +
Sbjct: 184 AEYPQARAWFSFTLRDSEHISDGSPLADVVAA--LASSTQIVALGINCVALENTTAALSH 241
Query: 248 IKQSHPTVQTIVYPNKG 264
+ P + +VYPN G
Sbjct: 242 LHALTP-LPLVVYPNSG 257
>gi|420369891|ref|ZP_14870538.1| homocysteine S-methyltransferase [Shigella flexneri 1235-66]
gi|391320804|gb|EIQ77605.1| homocysteine S-methyltransferase [Shigella flexneri 1235-66]
Length = 310
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 156/322 (48%), Gaps = 17/322 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P + + + LLDG+ +++ D LWS+ L PE E H
Sbjct: 1 MSQNNPL--SAILEKQDFLLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + EA A +VE +A YLA
Sbjct: 57 DYYRAGAQCAITASYQATP-------AGFAARGLDEAQSKALIGKSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G Y S E A+HRP VEAL+ AG D LA
Sbjct: 110 NPQAGTLLVAGSVGPYGAYLADGSEYRGDYQRSAEE--FQAFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P E AL +LL +P +AW SF+ +D H S G + V LLA+ Q+ A+
Sbjct: 168 ETLPNFAEISALAELLTAYPRARAWFSFTLRDSEHLSDGTPLRDVVA--LLADYPQVVAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILH-YVPQW 546
G+NC+ + + ++ + + +VYPN G +DSV W + L Y+PQW
Sbjct: 226 GINCIALENTTAALQHL-HGLTALPLVVYPNSGEHYDSVTKTWHHHGKACATLAGYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
L G +IGGCC T +I ++
Sbjct: 285 LAAGAKLIGGCCRTTPQDIAEL 306
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 128/256 (50%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L PE E H D+ RAGA ++ YQA
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSKALIGKSVELARKAREA---------YLAENPQAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y S E A+HRP VEAL+ AG D LA ET+P E AL +LL
Sbjct: 127 AYLADGSEYRGDYQRSAEE--FQAFHRPRVEALLDAGADLLACETLPNFAEISALAELLT 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+P +AW SF+ +D H S G + V LLA+ Q+ A+G+NC+ + + ++ +
Sbjct: 185 AYPRARAWFSFTLRDSEHLSDGTPLRDVVA--LLADYPQVVALGINCIALENTTAALQHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
+ +VYPN G
Sbjct: 243 -HGLTALPLVVYPNSG 257
>gi|157371708|ref|YP_001479697.1| homocysteine methyltransferase [Serratia proteamaculans 568]
gi|157323472|gb|ABV42569.1| homocysteine S-methyltransferase [Serratia proteamaculans 568]
Length = 312
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 162/329 (49%), Gaps = 26/329 (7%)
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE 300
V+ V + +HPT+ +LDG+ +++ D PLWS+ L PE
Sbjct: 3 VNNPVATLLSAHPTL-----------ILDGALATELEARGCDLSD--PLWSAKVLIENPE 49
Query: 301 ACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 360
+ H D+ + A + T G + +A +A +V+ +A
Sbjct: 50 LIYQVHLDYFNAGAQCAITASYQATP-------QGFLRRGLDQAQSLALIAKSVQLAQQA 102
Query: 361 GVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 420
DYLA + A S+GPYG L DGSEY G Y S+ + ++IA+HRP + AL A
Sbjct: 103 RRDYLAQHPQAAPLLIAGSVGPYGAYLADGSEYRGDY--SLPQEEMIAFHRPRISALAEA 160
Query: 421 GVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN 480
GVD LA ET+P+ E AL+ LL EFP AW +F+ +D H S G ++ V + L AN
Sbjct: 161 GVDLLACETLPSFSELQALLTLLEEFPTLGAWFAFTLRDSQHLSDGTPLTE-VMAALHAN 219
Query: 481 PDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SI 539
P Q+ AIG+NC+ +V+ ++ + +VYPN G +D+V W + S+
Sbjct: 220 P-QVLAIGINCIALENVAPALQQFA-ALADKPLLVYPNSGEHYDAVSKTWHACGGAHGSL 277
Query: 540 LHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+ + +W G +IGGCC T +I Q+
Sbjct: 278 IDQIGEWQRIGARLIGGCCRTTPQDIHQI 306
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 136/257 (52%), Gaps = 18/257 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D PLWS+ L PE + H D+ AGA ++ YQA
Sbjct: 18 ILDGALATELEARGCDLSD--PLWSAKVLIENPELIYQVHLDYFNAGAQCAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASIGPY 127
+ G + ++L L+ KSVQL A+ D Q P + A S+GPY
Sbjct: 76 QGFLRRGLDQAQSLALIAKSVQLAQQARRDYLAQHPQ----------AAPLLIAGSVGPY 125
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y S+ + ++IA+HRP + AL AGVD LA ET+P+ E AL+ LL
Sbjct: 126 GAYLADGSEYRGDY--SLPQEEMIAFHRPRISALAEAGVDLLACETLPSFSELQALLTLL 183
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP AW +F+ +D H S G ++ V + L ANP Q+ AIG+NC+ +V+ ++
Sbjct: 184 EEFPTLGAWFAFTLRDSQHLSDGTPLTE-VMAALHANP-QVLAIGINCIALENVAPALQQ 241
Query: 248 IKQSHPTVQTIVYPNKG 264
+ +VYPN G
Sbjct: 242 FA-ALADKPLLVYPNSG 257
>gi|378766021|ref|YP_005194482.1| homocysteine methyltransferase [Pantoea ananatis LMG 5342]
gi|365185495|emb|CCF08445.1| homocysteine methyltransferase [Pantoea ananatis LMG 5342]
Length = 311
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 154/322 (47%), Gaps = 30/322 (9%)
Query: 246 RCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVET 305
R ++QS P + LDG+ +++ D LWS+ L PE +
Sbjct: 8 RALQQSAPLI------------LDGALATELEARGCDLADA--LWSAKVLVENPELIYQV 53
Query: 306 HRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL 365
H D+ A + T G + E +A +VE RA DYL
Sbjct: 54 HYDYFAAGARCAITASYQATP-------QGFAARGLNETQSLALIAQSVELAKRARADYL 106
Query: 366 ALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL 425
A + A S+GPYG L DGSEY G Y ++ E +++A+HRP + AL+ AGVD L
Sbjct: 107 ATQAEAKILLVAGSVGPYGAFLADGSEYRGDY--ALPETEMMAFHRPRINALLTAGVDVL 164
Query: 426 ALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ 485
A ET+P+ EA ALV LL EFP +AW SF+ +D H S G + V + L A P Q+
Sbjct: 165 ACETLPSFAEAQALVALLGEFPDSRAWFSFTLRDAEHISDGTPLRE-VAAYLNAQP-QVV 222
Query: 486 AIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYV 543
A+G+NC+ V+ ++ +++ P V VYPN G +D+ W ++
Sbjct: 223 ALGINCIALESVTPALQQLQRLTDKPLV---VYPNSGEQYDASSKTWHSAPSGCTLHDKF 279
Query: 544 PQWLEEGVNIIGGCCEVTSYEI 565
+W + G +IGGCC + +I
Sbjct: 280 SEWQQAGARLIGGCCRTSPKDI 301
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 137/258 (53%), Gaps = 20/258 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE + H D+ AGA ++ YQA
Sbjct: 17 ILDGALATELEARGCDLADA--LWSAKVLVENPELIYQVHYDYFAAGARCAITASYQATP 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G +E ++L L+ +SV+L A+ T L+ G S+GPYG
Sbjct: 75 QGFAARGLNETQSLALIAQSVELAKRARADYLAT---QAEAKILLVAG------SVGPYG 125
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y ++ E +++A+HRP + AL+ AGVD LA ET+P+ EA ALV LL
Sbjct: 126 AFLADGSEYRGDY--ALPETEMMAFHRPRINALLTAGVDVLACETLPSFAEAQALVALLG 183
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP +AW SF+ +D H S G + V + L A P Q+ A+G+NC+ V+ ++ +
Sbjct: 184 EFPDSRAWFSFTLRDAEHISDGTPLRE-VAAYLNAQP-QVVALGINCIALESVTPALQQL 241
Query: 249 KQ--SHPTVQTIVYPNKG 264
++ P V VYPN G
Sbjct: 242 QRLTDKPLV---VYPNSG 256
>gi|238893292|ref|YP_002918026.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|262042370|ref|ZP_06015532.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|378977207|ref|YP_005225348.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|386033371|ref|YP_005953284.1| homocysteine methyltransferase [Klebsiella pneumoniae KCTC 2242]
gi|402782207|ref|YP_006637753.1| Homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|419973404|ref|ZP_14488829.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419978587|ref|ZP_14493883.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419983974|ref|ZP_14499123.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419990025|ref|ZP_14504999.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419995904|ref|ZP_14510709.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420000816|ref|ZP_14515474.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420007558|ref|ZP_14522051.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420013377|ref|ZP_14527688.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420018462|ref|ZP_14532659.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420024552|ref|ZP_14538565.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420030309|ref|ZP_14544136.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420035413|ref|ZP_14549077.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420041747|ref|ZP_14555243.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420047809|ref|ZP_14561125.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420053510|ref|ZP_14566688.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420058351|ref|ZP_14571364.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420064641|ref|ZP_14577450.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420072547|ref|ZP_14585184.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420076197|ref|ZP_14588670.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420081830|ref|ZP_14594134.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421915571|ref|ZP_16345169.1| Homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|424829167|ref|ZP_18253895.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|425080067|ref|ZP_18483164.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425090190|ref|ZP_18493275.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428932689|ref|ZP_19006261.1| homocysteine methyltransferase [Klebsiella pneumoniae JHCK1]
gi|428938760|ref|ZP_19011882.1| homocysteine methyltransferase [Klebsiella pneumoniae VA360]
gi|449061607|ref|ZP_21739007.1| homocysteine methyltransferase [Klebsiella pneumoniae hvKP1]
gi|238545608|dbj|BAH61959.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259040278|gb|EEW41387.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|339760499|gb|AEJ96719.1| homocysteine methyltransferase [Klebsiella pneumoniae KCTC 2242]
gi|364516618|gb|AEW59746.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397348876|gb|EJJ41974.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397351658|gb|EJJ44741.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397355025|gb|EJJ48051.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397366888|gb|EJJ59503.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397368546|gb|EJJ61152.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397373031|gb|EJJ65503.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397380326|gb|EJJ72511.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397384259|gb|EJJ76379.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397390419|gb|EJJ82329.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397399167|gb|EJJ90824.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397402130|gb|EJJ93742.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397408149|gb|EJJ99525.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397416649|gb|EJK07822.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397418284|gb|EJK09443.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397424295|gb|EJK15202.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397433347|gb|EJK23997.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397437392|gb|EJK27961.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397439066|gb|EJK29531.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397447708|gb|EJK37898.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397452763|gb|EJK42829.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|402543069|gb|AFQ67218.1| Homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|405606992|gb|EKB79962.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405613874|gb|EKB86595.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|410122080|emb|CCM87794.1| Homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|414706586|emb|CCN28290.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426305081|gb|EKV67210.1| homocysteine methyltransferase [Klebsiella pneumoniae VA360]
gi|426306822|gb|EKV68916.1| homocysteine methyltransferase [Klebsiella pneumoniae JHCK1]
gi|448872874|gb|EMB08016.1| homocysteine methyltransferase [Klebsiella pneumoniae hvKP1]
Length = 310
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 157/322 (48%), Gaps = 17/322 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + + LLDG+ +++ D LWS+ L P+ + H
Sbjct: 1 MSQTNPF--TALLAAQPFVLLDGAMATELEARGCDLADS--LWSAKVLLENPQLIRDVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + EA A +VE +A YLA
Sbjct: 57 DYFRAGAQVAITASYQATP-------AGFAARGLDEAQSRALIGKSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G Y S E A+HRP VEAL+ AG D LA
Sbjct: 110 NPQAGTLLVAGSVGPYGAFLADGSEYRGDYQRSAAE--FQAFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P+ E AL LL+E+P +AW SF+ +D H S G + V + L NP Q+ A+
Sbjct: 168 ETLPSFAEIQALAALLQEYPRARAWYSFTLRDAEHLSDGTPLRE-VMAALADNP-QVVAV 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQW 546
G+NC+ + + + S + +VYPN G +D+V W E S+ Y+PQW
Sbjct: 226 GINCIALENTPAALAHL-HSLTALPLVVYPNSGEHYDAVSKTWHHHGEACASLADYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
L G +IGGCC T +I +
Sbjct: 285 LAAGAKLIGGCCRTTPKDIAAL 306
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 130/256 (50%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L P+ + H D+ RAGA + ++ YQA
Sbjct: 18 LLDGAMATELEARGCDLADS--LWSAKVLLENPQLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSRALIGKSVELARKAREAYLAE---------NPQAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y S E A+HRP VEAL+ AG D LA ET+P+ E AL LL+
Sbjct: 127 AFLADGSEYRGDYQRSAAE--FQAFHRPRVEALLDAGADLLACETLPSFAEIQALAALLQ 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E+P +AW SF+ +D H S G + V + L NP Q+ A+G+NC+ + + +
Sbjct: 185 EYPRARAWYSFTLRDAEHLSDGTPLRE-VMAALADNP-QVVAVGINCIALENTPAALAHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S + +VYPN G
Sbjct: 243 -HSLTALPLVVYPNSG 257
>gi|421081602|ref|ZP_15542512.1| Homocysteine methyltransferase [Pectobacterium wasabiae CFBP 3304]
gi|401703691|gb|EJS93904.1| Homocysteine methyltransferase [Pectobacterium wasabiae CFBP 3304]
Length = 315
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 137/259 (52%), Gaps = 22/259 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D PLWS+ L P + H D+ +AGA ++ YQA
Sbjct: 17 VLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHLDYFKAGAQCAITASYQATP 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
GYSE E+L L+ KSVQL A+D + N G + A S+GPYG
Sbjct: 75 QGFKTRGYSEAESLTLIAKSVQLAAQARDDYRRD---------NPQAGVLLVAGSVGPYG 125
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y + +A+++A+HRP + AL AG D LA ET+P+ E AL+ LL
Sbjct: 126 AYLADGSEYRGDY--QLPQAEMMAFHRPRIAALHEAGADLLACETLPSFAEVEALIALLA 183
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSA---VTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
EFP +AW SF+ +D H S G + + V +CL Q+ A+G+NC+ +V+ +
Sbjct: 184 EFPQAQAWFSFTLRDSEHLSDGTPLHTVLERVNACL-----QVVAVGINCIALENVTPAL 238
Query: 246 RCIKQSHPTVQTIVYPNKG 264
+ S + +VYPN G
Sbjct: 239 TYLS-SLTNLPLVVYPNSG 256
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 149/303 (49%), Gaps = 21/303 (6%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D PLWS+ L P + H D+ + + A + T
Sbjct: 17 VLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHLDYFKAGAQCAITASYQATP 74
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
G +EA+ + +V+ +A DY + A S+GPYG
Sbjct: 75 -------QGFKTRGYSEAESLTLIAKSVQLAAQARDDYRRDNPQAGVLLVAGSVGPYGAY 127
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y + +A+++A+HRP + AL AG D LA ET+P+ E AL+ LL EF
Sbjct: 128 LADGSEYRGDY--QLPQAEMMAFHRPRIAALHEAGADLLACETLPSFAEVEALIALLAEF 185
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSA---VTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
P +AW SF+ +D H S G + + V +CL Q+ A+G+NC+ +V+ +
Sbjct: 186 PQAQAWFSFTLRDSEHLSDGTPLHTVLERVNACL-----QVVAVGINCIALENVTPALTY 240
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNIIGGCCEVTS 562
+ S + +VYPN G +D++ W D S+ Y+P+W G +IGGCC T
Sbjct: 241 LS-SLTNLPLVVYPNSGEQYDALTKTWSSGHDAACSLTAYLPEWRAAGARLIGGCCRTTP 299
Query: 563 YEI 565
+I
Sbjct: 300 ADI 302
>gi|253687924|ref|YP_003017114.1| homocysteine S-methyltransferase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754502|gb|ACT12578.1| homocysteine S-methyltransferase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 315
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 135/259 (52%), Gaps = 22/259 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D PLWS+ L P + H D+ +AGA ++ YQA
Sbjct: 17 VLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHLDYFKAGAQCAITASYQATP 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
GYSE E+L L+ KSVQL A+D N G + A S+GPYG
Sbjct: 75 QGFEARGYSEAESLALIAKSVQLAAQARDDYRHD---------NPQAGALLVAGSVGPYG 125
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y + +AD++A+HRP + AL+ AG D LA ET+P+ E L+ LL
Sbjct: 126 AYLADGSEYRGDY--QLPQADMMAFHRPRMAALLEAGADLLACETLPSFAEIETLIALLA 183
Query: 189 EFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
EFP +AWLSF+ +D H S G + + V +C Q+ A+G+NC+ V+ +
Sbjct: 184 EFPQAQAWLSFTLRDSEHLSDGSPLRTVLARVNAC-----SQVVAVGINCIALEKVTPAL 238
Query: 246 RCIKQSHPTVQTIVYPNKG 264
+ S + +VYPN G
Sbjct: 239 TYLS-SLTDLPLVVYPNSG 256
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 153/303 (50%), Gaps = 21/303 (6%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D PLWS+ L P + H D+ + + A + T
Sbjct: 17 VLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHLDYFKAGAQCAITASYQAT- 73
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
G E G+ +EA+ +A +V+ +A DY + + A S+GPYG
Sbjct: 74 -PQGFEARGY-----SEAESLALIAKSVQLAAQARDDYRHDNPQAGALLVAGSVGPYGAY 127
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y + +AD++A+HRP + AL+ AG D LA ET+P+ E L+ LL EF
Sbjct: 128 LADGSEYRGDY--QLPQADMMAFHRPRMAALLEAGADLLACETLPSFAEIETLIALLAEF 185
Query: 447 PGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
P +AWLSF+ +D H S G + + V +C Q+ A+G+NC+ V+ +
Sbjct: 186 PQAQAWLSFTLRDSEHLSDGSPLRTVLARVNAC-----SQVVAVGINCIALEKVTPALTY 240
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNIIGGCCEVTS 562
+ S + +VYPN G +D+V W D S+ Y+P+W G +IGGCC T
Sbjct: 241 LS-SLTDLPLVVYPNSGEQYDAVTKTWSSAHDAACSLTAYLPEWQAAGARLIGGCCRTTP 299
Query: 563 YEI 565
+I
Sbjct: 300 ADI 302
>gi|336394276|ref|ZP_08575675.1| homocysteine methyltransferase [Lactobacillus farciminis KCTC 3681]
Length = 314
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/262 (36%), Positives = 147/262 (56%), Gaps = 22/262 (8%)
Query: 9 LLDGSFTSQVSRHTIK-DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQAN 67
++DG+ +++ +H +K D D LWS+ + +PEA H+ + GAD ++ YQAN
Sbjct: 16 VVDGAMATELEKHGVKTDSD---LWSATAMIEKPEAITAVHKSYFEQGADFATTNTYQAN 72
Query: 68 VDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIG 125
V +LG SE+++ +L+ ++V L A+D+ ++ T + K + L+ G S+G
Sbjct: 73 VGKFMELGLSEKDSKNLITQAVDLAKKARDQYFDSLTEEERAQKVYPLVAG------SVG 126
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY+G Y ++T+ + +H ++ L +AGVD A ET P E +ALV
Sbjct: 127 PYGAYLADGSEYTGAY--NLTKKEYQDFHVQRMDLLDKAGVDLFAFETQPNFDETVALVD 184
Query: 186 LLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
LL+ +FP Q+AWLSFS +D G + AV + DQ+ AIGVNC ++ +
Sbjct: 185 LLQTKFPDQRAWLSFSIQDSETLCDGTSLYEAVK--YFEDVDQVSAIGVNCTNLENIQDV 242
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
VR I Q P IVYPN G
Sbjct: 243 VRNINQVTDKP---IIVYPNNG 261
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 154/312 (49%), Gaps = 28/312 (8%)
Query: 267 LLDGSFTSQVSRHTIK-DVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGT 325
++DG+ +++ +H +K D D LWS+ + +PEA H+ + + A +
Sbjct: 16 VVDGAMATELEKHGVKTDSD---LWSATAMIEKPEAITAVHKSYFEQGADFATTNTYQAN 72
Query: 326 VLRDGSEYSGHYVD-SMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-----TAAS 379
V G +++ ++E D V+ +A Y + +Q A S
Sbjct: 73 V--------GKFMELGLSEKDSKNLITQAVDLAKKARDQYFDSLTEEERAQKVYPLVAGS 124
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
+GPYG L DGSEY+G Y ++T+ + +H ++ L +AGVD A ET P E +AL
Sbjct: 125 VGPYGAYLADGSEYTGAY--NLTKKEYQDFHVQRMDLLDKAGVDLFAFETQPNFDETVAL 182
Query: 440 VKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
V LL+ +FP Q+AWLSFS +D G + AV + DQ+ AIGVNC ++
Sbjct: 183 VDLLQTKFPDQRAWLSFSIQDSETLCDGTSLYEAVK--YFEDVDQVSAIGVNCTNLENIQ 240
Query: 499 TLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556
+VR I Q P IVYPN G ++D W + VP+W+E G +IGG
Sbjct: 241 DVVRNINQVTDKPI---IVYPNNGDIYDPETKTWQKNPQADTFTDLVPEWIEAGAKLIGG 297
Query: 557 CCEVTSYEIQQM 568
CC T +I+Q+
Sbjct: 298 CCRTTPEDIKQI 309
>gi|332525627|ref|ZP_08401782.1| homocysteine methyltransferase [Rubrivivax benzoatilyticus JA2]
gi|332109192|gb|EGJ10115.1| homocysteine methyltransferase [Rubrivivax benzoatilyticus JA2]
Length = 310
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 137/259 (52%), Gaps = 14/259 (5%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ +LDG+ +++ R D PLWS+ L PE E H D+ RAGAD+ ++ YQA
Sbjct: 11 IVVLDGALATELERRGADLKD--PLWSARLLIERPELIREVHLDYFRAGADVATTASYQA 68
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G+S EA+ L+ +SV L A+D P + L+ AAS+GP
Sbjct: 69 TFEGFARRGFSHDEAVALMRRSVALAIEARDAFWAEPANRAGRRRPLV------AASVGP 122
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L DGSEY G+ +T L A+HRP +E L AG D LA ETIP EALA+ L
Sbjct: 123 YGAMLADGSEYRGY--PGVTREQLAAFHRPRLEVLAAAGADLLACETIPCLDEALAIASL 180
Query: 187 LREF-PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
L P AW+SFSC+D H S GE + + L + A+G+NC P +V L+
Sbjct: 181 LPTLQPALPAWISFSCRDGEHVSQGERFADCAAA--LDGLPGVAAVGLNCTAPEYVPALI 238
Query: 246 RCIKQSHPTVQTIVYPNKG 264
Q+ + +VYPN G
Sbjct: 239 -AAAQARTRLPIVVYPNSG 256
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 148/314 (47%), Gaps = 22/314 (7%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ +LDG+ +++ R D PLWS+ L PE E H D+ R + A +
Sbjct: 11 IVVLDGALATELERRGADLKD--PLWSARLLIERPELIREVHLDYFRAGADVATTASYQA 68
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-----TAAS 379
T + G + + +A R +V + A + A +P+ + AAS
Sbjct: 69 T-------FEGFARRGFSHDEAVALMRRSVALAIEARDAFWA--EPANRAGRRRPLVAAS 119
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
+GPYG +L DGSEY G+ +T L A+HRP +E L AG D LA ETIP EALA+
Sbjct: 120 VGPYGAMLADGSEYRGY--PGVTREQLAAFHRPRLEVLAAAGADLLACETIPCLDEALAI 177
Query: 440 VKLLREF-PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
LL P AW+SFSC+D H S GE + + L + A+G+NC P +V
Sbjct: 178 ASLLPTLQPALPAWISFSCRDGEHVSQGERFADCAAA--LDGLPGVAAVGLNCTAPEYVP 235
Query: 499 TLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
L+ Q+ + +VYPN G WD+V W D +W G +IGGCC
Sbjct: 236 ALI-AAAQARTRLPIVVYPNSGEQWDAVAKCWHGERDAADFAAQAERWRRGGARLIGGCC 294
Query: 559 EVTSYEIQQMRIMI 572
EI+ +R +
Sbjct: 295 RTGPDEIRALRAAL 308
>gi|325962525|ref|YP_004240431.1| homocysteine/selenocysteine methylase [Arthrobacter
phenanthrenivorans Sphe3]
gi|323468612|gb|ADX72297.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Arthrobacter
phenanthrenivorans Sphe3]
Length = 323
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 129/235 (54%), Gaps = 15/235 (6%)
Query: 30 PLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSV 89
PLWS+ L +P E HRD+ RAGA I ++ YQA G SEQEAL+L+ SV
Sbjct: 43 PLWSAKVLLEQPHLIKEVHRDYFRAGARIATTASYQATPQGFAPRGISEQEALELVALSV 102
Query: 90 QLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD 149
+L + A+ + + N G + A S+GPYG L DGSEYSG YV S TE
Sbjct: 103 RLADEARRE---------HLAANPGAGPLLVAGSVGPYGAYLADGSEYSGDYVLSTTE-- 151
Query: 150 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSH 209
+HRP + ALV AG D+LA ET+P+ EA AL+ L +EF ++W SFS +D H S
Sbjct: 152 FQDFHRPRITALVEAGADFLACETLPSFPEAQALLALTKEF-DVESWFSFSLRDGGHISD 210
Query: 210 GELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
G +++ V + L A P + AIGVNCV P H+ T + YPN G
Sbjct: 211 GTPLTT-VAAVLGAEP-LVAAIGVNCV-PLHLVTPALAALHRETDKPLVAYPNSG 262
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 109/317 (34%), Positives = 145/317 (45%), Gaps = 31/317 (9%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS-- 319
G+ DG+ +++ D PLWS+ L +P E HRD+ R I T AS
Sbjct: 21 GILPADGALATELEARGCNLDD--PLWSAKVLLEQPHLIKEVHRDYFRAGARIATTASYQ 78
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAAS 379
P G R SE +L+A +V A ++LA + A S
Sbjct: 79 ATPQGFAPRGISEQEA--------LELVAL---SVRLADEARREHLAANPGAGPLLVAGS 127
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
+GPYG L DGSEYSG YV S TE +HRP + ALV AG D+LA ET+P+ EA AL
Sbjct: 128 VGPYGAYLADGSEYSGDYVLSTTE--FQDFHRPRITALVEAGADFLACETLPSFPEAQAL 185
Query: 440 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
+ L +EF ++W SFS +D H S G +++ V + L A P + AIGVNCV P H+ T
Sbjct: 186 LALTKEF-DVESWFSFSLRDGGHISDGTPLTT-VAAVLGAEP-LVAAIGVNCV-PLHLVT 241
Query: 500 LVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQ--------WLEEGV 551
+ YPN G +D W P W + G
Sbjct: 242 PALAALHRETDKPLVAYPNSGETYDPATKTWGQAAASGRGRDGTPATPADGAVTWRDLGA 301
Query: 552 NIIGGCCEVTSYEIQQM 568
IIGGCC T +I +
Sbjct: 302 RIIGGCCRTTPRDIAAV 318
>gi|448243338|ref|YP_007407391.1| S-methylmethionine:homocysteine methyltransferase, CP4-6 prophage
[Serratia marcescens WW4]
gi|445213702|gb|AGE19372.1| S-methylmethionine:homocysteine methyltransferase, CP4-6 prophage
[Serratia marcescens WW4]
Length = 312
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 152/306 (49%), Gaps = 21/306 (6%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGT- 325
+LDG+ +++ D PLWS+ L PE + H D+ + A + T
Sbjct: 18 ILDGALATELEARGCDLTD--PLWSAKVLIENPELIYQVHLDYFNAGAQCAITASYQATP 75
Query: 326 --VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPY 383
LR G +D LIA +V+ RA DYLA + A S+GPY
Sbjct: 76 QGFLRRG-------LDQEQSLALIA---KSVQLAQRARRDYLAEHPQAAPLLIAGSVGPY 125
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L DGSEY G Y + + D IA+HRP + AL AGVD LA ET+P+ E AL+ LL
Sbjct: 126 GAYLADGSEYRGDY--RLAQDDFIAFHRPRLAALAVAGVDLLACETLPSFAELQALLTLL 183
Query: 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
+EFP AW +F+ +D H S G ++ V S L NP Q+ AIG+NC+ V+ +R
Sbjct: 184 QEFPTLGAWFAFTLRDSQHLSDGTPLTE-VMSALRGNP-QVLAIGINCIALDKVAPALRQ 241
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNIIGGCCEVTS 562
+ + +VYPN G +D+V W E+ S+ +W G +IGGCC T
Sbjct: 242 LS-ALADKPLLVYPNSGEHYDAVSKTWHACGGEHGSLADQATEWRALGAQLIGGCCRTTP 300
Query: 563 YEIQQM 568
+I+ +
Sbjct: 301 QDIRAI 306
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 135/257 (52%), Gaps = 18/257 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D PLWS+ L PE + H D+ AGA ++ YQA
Sbjct: 18 ILDGALATELEARGCDLTD--PLWSAKVLIENPELIYQVHLDYFNAGAQCAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASIGPY 127
+ G ++++L L+ KSVQL A+ D + P + A S+GPY
Sbjct: 76 QGFLRRGLDQEQSLALIAKSVQLAQRARRDYLAEHPQ----------AAPLLIAGSVGPY 125
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y + + D IA+HRP + AL AGVD LA ET+P+ E AL+ LL
Sbjct: 126 GAYLADGSEYRGDY--RLAQDDFIAFHRPRLAALAVAGVDLLACETLPSFAELQALLTLL 183
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
+EFP AW +F+ +D H S G ++ V S L NP Q+ AIG+NC+ V+ +R
Sbjct: 184 QEFPTLGAWFAFTLRDSQHLSDGTPLTE-VMSALRGNP-QVLAIGINCIALDKVAPALRQ 241
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + +VYPN G
Sbjct: 242 LS-ALADKPLLVYPNSG 257
>gi|291618538|ref|YP_003521280.1| MmuM [Pantoea ananatis LMG 20103]
gi|291153568|gb|ADD78152.1| MmuM [Pantoea ananatis LMG 20103]
Length = 341
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 154/322 (47%), Gaps = 30/322 (9%)
Query: 246 RCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVET 305
R ++QS P + LDG+ +++ D LWS+ L PE +
Sbjct: 38 RALQQSAPLI------------LDGALATELEARGCDLADA--LWSAKVLVENPELIYQV 83
Query: 306 HRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL 365
H D+ A + T G + E +A +VE RA DYL
Sbjct: 84 HYDYFAAGARCAITASYQATP-------QGFAARGLNETQSLALIAQSVELAKRARADYL 136
Query: 366 ALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL 425
A + A S+GPYG L DGSEY G Y ++ E +++A+HRP + AL+ AGVD L
Sbjct: 137 ATQAEAKILLVAGSVGPYGAFLADGSEYRGDY--ALPETEMMAFHRPRINALLTAGVDVL 194
Query: 426 ALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ 485
A ET+P+ EA ALV LL EFP +AW SF+ +D H S G + V + L A P Q+
Sbjct: 195 ACETLPSFAEAQALVALLGEFPDSRAWFSFTLRDAEHISDGTPLRE-VAAYLNAQP-QVV 252
Query: 486 AIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYV 543
A+G+NC+ V+ ++ +++ P V VYPN G +D+ W ++
Sbjct: 253 ALGINCIALESVTPALQQLQRLTDKPLV---VYPNSGEQYDASSKTWHSAPSGCTLHDKF 309
Query: 544 PQWLEEGVNIIGGCCEVTSYEI 565
+W + G +IGGCC + +I
Sbjct: 310 SEWQQAGARLIGGCCRTSPKDI 331
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 137/258 (53%), Gaps = 20/258 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE + H D+ AGA ++ YQA
Sbjct: 47 ILDGALATELEARGCDLADA--LWSAKVLVENPELIYQVHYDYFAAGARCAITASYQATP 104
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G +E ++L L+ +SV+L A+ T L+ G S+GPYG
Sbjct: 105 QGFAARGLNETQSLALIAQSVELAKRARADYLAT---QAEAKILLVAG------SVGPYG 155
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y ++ E +++A+HRP + AL+ AGVD LA ET+P+ EA ALV LL
Sbjct: 156 AFLADGSEYRGDY--ALPETEMMAFHRPRINALLTAGVDVLACETLPSFAEAQALVALLG 213
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP +AW SF+ +D H S G + V + L A P Q+ A+G+NC+ V+ ++ +
Sbjct: 214 EFPDSRAWFSFTLRDAEHISDGTPLRE-VAAYLNAQP-QVVALGINCIALESVTPALQQL 271
Query: 249 KQ--SHPTVQTIVYPNKG 264
++ P V VYPN G
Sbjct: 272 QRLTDKPLV---VYPNSG 286
>gi|152968883|ref|YP_001333992.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|419762034|ref|ZP_14288283.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|424934883|ref|ZP_18353255.1| Homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425078177|ref|ZP_18481280.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425088810|ref|ZP_18491903.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|150953732|gb|ABR75762.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|397744952|gb|EJK92161.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|405591156|gb|EKB64669.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405601902|gb|EKB75055.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|407809070|gb|EKF80321.1| Homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
Length = 310
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 149/303 (49%), Gaps = 15/303 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
LLDG+ +++ D LWS+ L P+ + H D+ R + A + T
Sbjct: 18 LLDGAMATELEARGCDLADS--LWSAKVLLENPQLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+G + EA A +VE +A YLA + + A S+GPYG
Sbjct: 76 -------AGFAARGLDEAQSRALIGKSVELARKAREAYLAENPQAGTLLVAGSVGPYGAF 128
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y S E A+HRP VEAL+ AG D LA ET+P+ E AL LL+E+
Sbjct: 129 LADGSEYRGDYQRSAAE--FQAFHRPRVEALLDAGADLLACETLPSFAEIQALAALLQEY 186
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P +AW SF+ +D H S G + V + L NP Q+ A+G+NC+ + + +
Sbjct: 187 PRARAWYSFTLRDAEHLSDGTPLRE-VMAALADNP-QVVAVGINCIALENTPAALAHL-H 243
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
S + +VYPN G +D+V W E S+ Y+PQWL G +IGGCC T +I
Sbjct: 244 SLTALPLVVYPNSGEHYDAVSKTWHHHGEACASLADYLPQWLAAGAKLIGGCCRTTPKDI 303
Query: 566 QQM 568
+
Sbjct: 304 AAL 306
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 130/256 (50%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L P+ + H D+ RAGA + ++ YQA
Sbjct: 18 LLDGAMATELEARGCDLADS--LWSAKVLLENPQLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSRALIGKSVELARKAREAYLAE---------NPQAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y S E A+HRP VEAL+ AG D LA ET+P+ E AL LL+
Sbjct: 127 AFLADGSEYRGDYQRSAAE--FQAFHRPRVEALLDAGADLLACETLPSFAEIQALAALLQ 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E+P +AW SF+ +D H S G + V + L NP Q+ A+G+NC+ + + +
Sbjct: 185 EYPRARAWYSFTLRDAEHLSDGTPLRE-VMAALADNP-QVVAVGINCIALENTPAALAHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S + +VYPN G
Sbjct: 243 -HSLTALPLVVYPNSG 257
>gi|330006839|ref|ZP_08305716.1| homocysteine S-methyltransferase [Klebsiella sp. MS 92-3]
gi|328535720|gb|EGF62164.1| homocysteine S-methyltransferase [Klebsiella sp. MS 92-3]
Length = 310
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 157/322 (48%), Gaps = 17/322 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + + LLDG+ +++ D LWS+ L P+ + H
Sbjct: 1 MSQTNPF--TALLAAQPFVLLDGAMATELEARGCDLADS--LWSAKVLLENPQLIRDVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + EA A +VE +A YLA
Sbjct: 57 DYFRAGAQVAITASYQATP-------AGFAARGLDEAQSRALIGKSVELARKALEAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G Y S E A+HRP VEAL+ AG D LA
Sbjct: 110 NPQAGTLLVAGSVGPYGAFLADGSEYRGDYQRSAAE--FQAFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P+ E AL LL+E+P +AW SF+ +D H S G + V + L NP Q+ A+
Sbjct: 168 ETLPSFAEIQALAALLQEYPRARAWYSFTLRDAEHLSDGTPLRE-VMAALADNP-QVVAV 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQW 546
G+NC+ + + + S + +VYPN G +D+V W E S+ Y+PQW
Sbjct: 226 GINCIALENTPAALAHL-HSLTALPLVVYPNSGEHYDAVSKTWHHHGEACASLADYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
L G +IGGCC T +I +
Sbjct: 285 LAAGAKLIGGCCRTTPKDIAAL 306
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 129/256 (50%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L P+ + H D+ RAGA + ++ YQA
Sbjct: 18 LLDGAMATELEARGCDLADS--LWSAKVLLENPQLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A + N G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSRALIGKSVELARKA---------LEAYLAENPQAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y S E A+HRP VEAL+ AG D LA ET+P+ E AL LL+
Sbjct: 127 AFLADGSEYRGDYQRSAAE--FQAFHRPRVEALLDAGADLLACETLPSFAEIQALAALLQ 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E+P +AW SF+ +D H S G + V + L NP Q+ A+G+NC+ + + +
Sbjct: 185 EYPRARAWYSFTLRDAEHLSDGTPLRE-VMAALADNP-QVVAVGINCIALENTPAALAHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S + +VYPN G
Sbjct: 243 -HSLTALPLVVYPNSG 257
>gi|403058001|ref|YP_006646218.1| homocysteine methyltransferase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402805327|gb|AFR02965.1| homocysteine methyltransferase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 315
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 136/257 (52%), Gaps = 18/257 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D PLWS+ L P + H D+ +AGA ++ YQA
Sbjct: 17 VLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHLDYFKAGAQCAITASYQATP 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
GYSE E+L L+ KSVQL A+D + N G + A S+GPYG
Sbjct: 75 QGFAARGYSETESLALIAKSVQLAAQARDDYRRD---------NPQAGTLLVAGSVGPYG 125
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y + +A+++A+HRP + AL AG D LA ET+P+ E AL+ LL
Sbjct: 126 AYLADGSEYRGDY--QLPQAEMMAFHRPRIAALHEAGADLLACETLPSFAEIEALIALLA 183
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIGVNCVRPSHVSTLVRC 247
EFP +AW SF+ +D H S G + + + NP Q+ A+G+NC+ +V+ +
Sbjct: 184 EFPQAQAWFSFTLRDSEHLSDGTPLRTVLAR---VNPCSQVVAVGINCIALENVTPALTH 240
Query: 248 IKQSHPTVQTIVYPNKG 264
+ S + +VYPN G
Sbjct: 241 LS-SLTELPLVVYPNSG 256
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 150/301 (49%), Gaps = 17/301 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D PLWS+ L P + H D+ + + A + T
Sbjct: 17 VLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHLDYFKAGAQCAITASYQATP 74
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
G +E + +A +V+ +A DY + + A S+GPYG
Sbjct: 75 -------QGFAARGYSETESLALIAKSVQLAAQARDDYRRDNPQAGTLLVAGSVGPYGAY 127
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y + +A+++A+HRP + AL AG D LA ET+P+ E AL+ LL EF
Sbjct: 128 LADGSEYRGDY--QLPQAEMMAFHRPRIAALHEAGADLLACETLPSFAEIEALIALLAEF 185
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIGVNCVRPSHVSTLVRCIK 505
P +AW SF+ +D H S G + + + NP Q+ A+G+NC+ +V+ + +
Sbjct: 186 PQAQAWFSFTLRDSEHLSDGTPLRTVLAR---VNPCSQVVAVGINCIALENVTPALTHLS 242
Query: 506 QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNIIGGCCEVTSYE 564
S + +VYPN G +D+V W D+ S+ Y+P+W G +IGGCC T +
Sbjct: 243 -SLTELPLVVYPNSGEQYDAVTKTWSSAHDDICSLTAYLPEWQAAGARLIGGCCRTTPAD 301
Query: 565 I 565
I
Sbjct: 302 I 302
>gi|383757004|ref|YP_005435989.1| homocysteine S-methyltransferase MmuM [Rubrivivax gelatinosus
IL144]
gi|381377673|dbj|BAL94490.1| homocysteine S-methyltransferase MmuM [Rubrivivax gelatinosus
IL144]
Length = 310
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 136/259 (52%), Gaps = 14/259 (5%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ +LDG+ +++ R D PLWS+ L PE E H D+ RAGAD+ ++ YQA
Sbjct: 11 ILVLDGALATELERRGADLKD--PLWSAKLLIERPELIREVHLDYFRAGADVATTASYQA 68
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G+S EA L+ +SV L A+D P + L+ AAS+GP
Sbjct: 69 TFEGFARRGFSHDEAGALMRRSVALAIEARDAFWAEPANRAGRRRPLV------AASVGP 122
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L DGSEY G+ +T L A+HRP ++ L AG D LA ETIP EALA+ L
Sbjct: 123 YGAMLADGSEYRGY--PGVTREQLAAFHRPRLQVLAAAGADLLACETIPCLDEALAIASL 180
Query: 187 LREF-PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
L P AW+SFSC+D H S GE + + L + A+G+NC P HV LV
Sbjct: 181 LPGLQPALPAWISFSCRDGEHVSQGERFADCAAA--LDGLPGVAAVGLNCTAPEHVPALV 238
Query: 246 RCIKQSHPTVQTIVYPNKG 264
Q+ + +VYPN G
Sbjct: 239 -AAAQARTRLPIVVYPNSG 256
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 147/314 (46%), Gaps = 22/314 (7%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ +LDG+ +++ R D PLWS+ L PE E H D+ R + A +
Sbjct: 11 ILVLDGALATELERRGADLKD--PLWSAKLLIERPELIREVHLDYFRAGADVATTASYQA 68
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-----TAAS 379
T + G + + A R +V + A + A +P+ + AAS
Sbjct: 69 T-------FEGFARRGFSHDEAGALMRRSVALAIEARDAFWA--EPANRAGRRRPLVAAS 119
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
+GPYG +L DGSEY G+ +T L A+HRP ++ L AG D LA ETIP EALA+
Sbjct: 120 VGPYGAMLADGSEYRGY--PGVTREQLAAFHRPRLQVLAAAGADLLACETIPCLDEALAI 177
Query: 440 VKLLREF-PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
LL P AW+SFSC+D H S GE + + L + A+G+NC P HV
Sbjct: 178 ASLLPGLQPALPAWISFSCRDGEHVSQGERFADCAAA--LDGLPGVAAVGLNCTAPEHVP 235
Query: 499 TLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
LV Q+ + +VYPN G WD+V W D +W G +IGGCC
Sbjct: 236 ALV-AAAQARTRLPIVVYPNSGEQWDAVAKCWHGERDAADFAAQAQRWRRGGARLIGGCC 294
Query: 559 EVTSYEIQQMRIMI 572
EI+ +R +
Sbjct: 295 RTGPDEIRALRAAL 308
>gi|227113027|ref|ZP_03826683.1| homocysteine methyltransferase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 315
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 137/259 (52%), Gaps = 22/259 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D PLWS+ L P + H D+ +AGA ++ YQA
Sbjct: 17 VLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHLDYFKAGAQCAITASYQATP 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
GYSE E+L L+ KSVQL A+D + N G + A S+GPYG
Sbjct: 75 QGFKARGYSETESLALIAKSVQLAAQARDDYRRD---------NPQAGTLLVAGSVGPYG 125
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y + +A+++A+HRP + AL AG D LA ET+P+ E AL+ LL
Sbjct: 126 AYLADGSEYRGDY--QLPQAEMMAFHRPRIAALHEAGADLLACETLPSFAEIEALIALLA 183
Query: 189 EFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
EFP +AW SF+ +D H S G + + V +C Q+ A+G+NC+ +V+ +
Sbjct: 184 EFPQAQAWFSFTLRDSEHLSDGTSLRTVLARVNAC-----SQVVAVGINCIALENVTPAL 238
Query: 246 RCIKQSHPTVQTIVYPNKG 264
+ + S + +VYPN G
Sbjct: 239 KHLS-SLTDLPLVVYPNSG 256
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 151/303 (49%), Gaps = 21/303 (6%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D PLWS+ L P + H D+ + + A + T
Sbjct: 17 VLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHLDYFKAGAQCAITASYQATP 74
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
G +E + +A +V+ +A DY + + A S+GPYG
Sbjct: 75 -------QGFKARGYSETESLALIAKSVQLAAQARDDYRRDNPQAGTLLVAGSVGPYGAY 127
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y + +A+++A+HRP + AL AG D LA ET+P+ E AL+ LL EF
Sbjct: 128 LADGSEYRGDY--QLPQAEMMAFHRPRIAALHEAGADLLACETLPSFAEIEALIALLAEF 185
Query: 447 PGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
P +AW SF+ +D H S G + + V +C Q+ A+G+NC+ +V+ ++
Sbjct: 186 PQAQAWFSFTLRDSEHLSDGTSLRTVLARVNAC-----SQVVAVGINCIALENVTPALKH 240
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNIIGGCCEVTS 562
+ S + +VYPN G +D+V W D+ S+ Y+P+W G +IGGCC T
Sbjct: 241 LS-SLTDLPLVVYPNSGEQYDAVTKTWSSAHDDACSLTAYLPEWQAAGARLIGGCCRTTP 299
Query: 563 YEI 565
+I
Sbjct: 300 ADI 302
>gi|365138363|ref|ZP_09345050.1| homocysteine S-methyltransferase [Klebsiella sp. 4_1_44FAA]
gi|363655175|gb|EHL94041.1| homocysteine S-methyltransferase [Klebsiella sp. 4_1_44FAA]
Length = 310
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 158/322 (49%), Gaps = 17/322 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + + LLDG+ +++ D LWS+ L P+ + H
Sbjct: 1 MSQTNPF--TALLAAQPFVLLDGAMATELEARGCDLADS--LWSAKVLLENPQLIRDVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + EA A +VE +A YLA
Sbjct: 57 DYFRAGAQVAITASYQATP-------AGFAARGLDEAQSRALIGKSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G Y S E A+HRP VEAL+ AG D LA
Sbjct: 110 NPQAGTLLVAGSVGPYGAFLADGSEYRGDYQRSAAE--FQAFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P+ E AL LL+ +P +AW +F+ +D H S G + +T+ LA+ Q+ A+
Sbjct: 168 ETLPSFAEIQALTALLQAYPRARAWYAFTLRDAEHLSDGTPLREVMTA--LADNPQVVAV 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQW 546
G+NC+ + + + S + +VYPN G +D+V W E S+ Y+PQW
Sbjct: 226 GINCIALENTPAALAHL-HSLTALPLVVYPNSGEHYDAVSKTWHHHGEACASLADYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
L G +IGGCC T +I ++
Sbjct: 285 LAAGAKLIGGCCRTTPKDIAEL 306
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 130/256 (50%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L P+ + H D+ RAGA + ++ YQA
Sbjct: 18 LLDGAMATELEARGCDLADS--LWSAKVLLENPQLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSRALIGKSVELARKAREAYLAE---------NPQAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y S E A+HRP VEAL+ AG D LA ET+P+ E AL LL+
Sbjct: 127 AFLADGSEYRGDYQRSAAE--FQAFHRPRVEALLDAGADLLACETLPSFAEIQALTALLQ 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+P +AW +F+ +D H S G + +T+ LA+ Q+ A+G+NC+ + + +
Sbjct: 185 AYPRARAWYAFTLRDAEHLSDGTPLREVMTA--LADNPQVVAVGINCIALENTPAALAHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S + +VYPN G
Sbjct: 243 -HSLTALPLVVYPNSG 257
>gi|225873019|ref|YP_002754478.1| homocysteine methyltransferase [Acidobacterium capsulatum ATCC
51196]
gi|225793009|gb|ACO33099.1| homocysteine S-methyltransferase [Acidobacterium capsulatum ATCC
51196]
Length = 310
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 139/265 (52%), Gaps = 24/265 (9%)
Query: 3 KICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSS 62
+ ++++LDG +++ R ++ G PLWS+ L PEA H D++RAG+D I +
Sbjct: 8 EFLRIRVLDGGMATELERRGF-NISG-PLWSAHVLDESPEAIQAVHLDYLRAGSDCISTV 65
Query: 63 CYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK---ENQTPDINLNKTFNLLTGHIE 119
YQ + +L + L +SV L A+ + EN P I
Sbjct: 66 SYQISAQGYAELSRPDPAFATALRRSVALAEEARARYAQENSRP--------------IW 111
Query: 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 179
AAS+GPYG L +G+E+ G+Y S+T DL+ +HR + L G D +A ETIP+ E
Sbjct: 112 IAASLGPYGAALHNGAEFHGNY--SITFDDLVEFHRARLAVLAETGADLVAFETIPSLDE 169
Query: 180 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 239
A A++ L P AWLSF+C+D+ H +HGE + A + LL + Q+ A+G+NC P
Sbjct: 170 ARAILTALTHTPNVSAWLSFTCRDEAHIAHGEPL--AACAQLLDSAVQVLALGINCTAPR 227
Query: 240 HVSTLVRCIKQSHPTVQTIVYPNKG 264
HV+ L+ QS I YPN G
Sbjct: 228 HVAPLL-AAAQSQTRKPVIAYPNSG 251
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 147/313 (46%), Gaps = 36/313 (11%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+++LDG +++ R ++ G PLWS+ L PEA H D++R + +++
Sbjct: 12 IRVLDGGMATELERRGF-NISG-PLWSAHVLDESPEAIQAVHLDYLRAGSDCISTVS--- 66
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT------AA 378
+ S ++ D P +R V + + + AA
Sbjct: 67 ------YQISAQGYAELSRPD------PAFATALRRSVALAEEARARYAQENSRPIWIAA 114
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG L +G+E+ G+Y S+T DL+ +HR + L G D +A ETIP+ EA A
Sbjct: 115 SLGPYGAALHNGAEFHGNY--SITFDDLVEFHRARLAVLAETGADLVAFETIPSLDEARA 172
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
++ L P AWLSF+C+D+ H +HGE + A + LL + Q+ A+G+NC P HV+
Sbjct: 173 ILTALTHTPNVSAWLSFTCRDEAHIAHGEPL--AACAQLLDSAVQVLALGINCTAPRHVA 230
Query: 499 TLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTED------EYSILHYVPQWLEEGVN 552
L+ QS I YPN G W++ W D +Y L QW G
Sbjct: 231 PLL-AAAQSQTRKPVIAYPNSGESWNAATRAWQGRTDLAAEVKDYQTL--AGQWFAAGAQ 287
Query: 553 IIGGCCEVTSYEI 565
IGGCC T I
Sbjct: 288 AIGGCCRTTPEHI 300
>gi|378581028|ref|ZP_09829679.1| homocysteine S-methyltransferase [Pantoea stewartii subsp.
stewartii DC283]
gi|377816326|gb|EHT99430.1| homocysteine S-methyltransferase [Pantoea stewartii subsp.
stewartii DC283]
Length = 311
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 147/301 (48%), Gaps = 18/301 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D LWS+ L PE + H D+ A + T
Sbjct: 17 ILDGALATELEARGCDLTDA--LWSAKVLMENPELIYQVHYDYFAAGARCAITASYQATP 74
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
G + E +A +VE RA DYLA A S+GPYG
Sbjct: 75 -------QGFAARGLNEQQSLALIAQSVELAQRARADYLATQTDDRILLVAGSVGPYGAF 127
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y ++ EA+++A+HRP + AL+ AGVD LA ET+P+ EA LV LLREF
Sbjct: 128 LADGSEYRGDY--TLPEAEMMAFHRPRIAALLAAGVDVLACETLPSFAEAQTLVNLLREF 185
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P AW SF+ +D H S G + V + L A P Q+ A+G+NC+ V+ ++ +++
Sbjct: 186 PDSCAWFSFTLRDAEHLSDGTPLRD-VAAYLNAQP-QVIAVGINCIALDSVTPALQQLQR 243
Query: 507 --SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYE 564
P V VYPN G +D+ W ++ +W + G +IGGCC + +
Sbjct: 244 LTEKPLV---VYPNSGEQYDTNSKSWHSAPSGCTLHDKFAEWQQAGARLIGGCCRTSPRD 300
Query: 565 I 565
I
Sbjct: 301 I 301
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/260 (37%), Positives = 139/260 (53%), Gaps = 24/260 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE + H D+ AGA ++ YQA
Sbjct: 17 ILDGALATELEARGCDLTDA--LWSAKVLMENPELIYQVHYDYFAAGARCAITASYQATP 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGP 126
G +EQ++L L+ +SV+L A+ QT D L A S+GP
Sbjct: 75 QGFAARGLNEQQSLALIAQSVELAQRARADYLATQTDDRIL-----------LVAGSVGP 123
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y ++ EA+++A+HRP + AL+ AGVD LA ET+P+ EA LV L
Sbjct: 124 YGAFLADGSEYRGDY--TLPEAEMMAFHRPRIAALLAAGVDVLACETLPSFAEAQTLVNL 181
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
LREFP AW SF+ +D H S G + V + L A P Q+ A+G+NC+ V+ ++
Sbjct: 182 LREFPDSCAWFSFTLRDAEHLSDGTPLRD-VAAYLNAQP-QVIAVGINCIALDSVTPALQ 239
Query: 247 CIKQ--SHPTVQTIVYPNKG 264
+++ P V VYPN G
Sbjct: 240 QLQRLTEKPLV---VYPNSG 256
>gi|295096844|emb|CBK85934.1| Homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 310
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 158/324 (48%), Gaps = 17/324 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + N+ +LDG+ +++ D LWS+ L PE + H
Sbjct: 1 MSQNNPL--TALLENQPFVVLDGAMATELEARGCNLADS--LWSAKVLMENPELIRDVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + EA A +VE +A YLA
Sbjct: 57 DYYRAGAQVAITASYQATP-------AGFAARGLDEAQSRALIGKSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G YV E A+HRP VEAL+ AG D LA
Sbjct: 110 NAQAGTLLVAGSVGPYGAYLADGSEYRGDYVRRAEE--FTAFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P+ E L +L +P +AW SF+ +D H S G + V++ L + Q+ A+
Sbjct: 168 ETLPSFPEIKVLAAMLTAYPRARAWFSFTLRDSEHLSDGTPLRDVVSA--LESYPQVVAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILH-YVPQW 546
G+NC+ + + + + S ++ +VYPN G +D+V W D L Y+PQW
Sbjct: 226 GINCIALENTTAALTHL-HSLTSLPLVVYPNSGEHYDAVSKTWHHHGDACETLAGYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQMRI 570
L+ G +IGGCC T +I + +
Sbjct: 285 LDAGAKLIGGCCRTTPQDIAALTV 308
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 129/256 (50%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE + H D+ RAGA + ++ YQA
Sbjct: 18 VLDGAMATELEARGCNLADS--LWSAKVLMENPELIRDVHLDYYRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSRALIGKSVELARKAREAYLAE---------NAQAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV E A+HRP VEAL+ AG D LA ET+P+ E L +L
Sbjct: 127 AYLADGSEYRGDYVRRAEE--FTAFHRPRVEALLDAGADLLACETLPSFPEIKVLAAMLT 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+P +AW SF+ +D H S G + V++ L + Q+ A+G+NC+ + + + +
Sbjct: 185 AYPRARAWFSFTLRDSEHLSDGTPLRDVVSA--LESYPQVVALGINCIALENTTAALTHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S ++ +VYPN G
Sbjct: 243 -HSLTSLPLVVYPNSG 257
>gi|224085515|ref|XP_002307602.1| homocysteine s-methyltransferase [Populus trichocarpa]
gi|222857051|gb|EEE94598.1| homocysteine s-methyltransferase [Populus trichocarpa]
Length = 341
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 151/288 (52%), Gaps = 20/288 (6%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V ++DG +++ RH D PLWS+ L T P E H D++ AGADII ++ YQA
Sbjct: 22 VAIIDGGLATELERHGADLND--PLWSAKCLLTSPHLVREVHLDYLEAGADIIITASYQA 79
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK-----ENQTPDINLNKTFNLLTGHIETA 121
+ G+S +E+ LL KSV++ A+D + +PD N + L I A
Sbjct: 80 TIQGFEAKGFSGEESESLLRKSVKIACEARDIYYDRCQKGSPDSNNGRV--LKQRPILVA 137
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
ASIG YG L DGSEYSG+Y D++T L +HR V+ L +G D +A ET+P + EA
Sbjct: 138 ASIGSYGAYLADGSEYSGNYGDAITLETLKDFHRRRVQILAESGADLIAFETVPNKVEAQ 197
Query: 182 ALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVNCVR 237
A V+LL+E + AW SF+ KD + G+ + +S SC + A+G+NC
Sbjct: 198 AYVELLKEEDIKIPAWFSFNSKDGVNVVSGDSLLDCASIAESC-----QNVVAVGINCTP 252
Query: 238 PSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD 285
P + L+ IK+ T ++YPN G + DG V I D D
Sbjct: 253 PRFIHGLILSIKKV-TTKPILIYPNSG-ESYDGKRKEWVQNTGISDQD 298
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 159/342 (46%), Gaps = 41/342 (11%)
Query: 252 HPTVQT------IVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVET 305
HP +T + + GV ++DG +++ RH D PLWS+ L T P E
Sbjct: 3 HPAAETSSFMTDFLRQSGGVAIIDGGLATELERHGADLND--PLWSAKCLLTSPHLVREV 60
Query: 306 HRDFIRGHIETAASIGPYGTVLR-DGSEYSGHYVDSMTEADLIAWHRPNVEALVRA-GVD 363
H D++ + + T+ + +SG +S+ R +V+ A +
Sbjct: 61 HLDYLEAGADIIITASYQATIQGFEAKGFSGEESESLL--------RKSVKIACEARDIY 112
Query: 364 YLALIKPSISSQT-----------AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRP 412
Y K S S AASIG YG L DGSEYSG+Y D++T L +HR
Sbjct: 113 YDRCQKGSPDSNNGRVLKQRPILVAASIGSYGAYLADGSEYSGNYGDAITLETLKDFHRR 172
Query: 413 NVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELI-- 469
V+ L +G D +A ET+P + EA A V+LL+E + AW SF+ KD + G+ +
Sbjct: 173 RVQILAESGADLIAFETVPNKVEAQAYVELLKEEDIKIPAWFSFNSKDGVNVVSGDSLLD 232
Query: 470 -SSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHM 528
+S SC + A+G+NC P + L+ IK+ T ++YPN G +D
Sbjct: 233 CASIAESC-----QNVVAVGINCTPPRFIHGLILSIKKV-TTKPILIYPNSGESYDGKRK 286
Query: 529 KWLDTE--DEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+W+ + + YV +W E G ++GGCC T I+ +
Sbjct: 287 EWVQNTGISDQDFVSYVNKWCEIGAALVGGCCRTTPNTIRAI 328
>gi|50121721|ref|YP_050888.1| homocysteine methyltransferase [Pectobacterium atrosepticum
SCRI1043]
gi|49612247|emb|CAG75697.1| homocysteine S-methyltransferase [Pectobacterium atrosepticum
SCRI1043]
Length = 311
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 135/259 (52%), Gaps = 22/259 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D PLWS+ L P + H D+ +AGA ++ YQA
Sbjct: 17 VLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHFDYFKAGAQCAITASYQATP 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
GYSE E+L L+ KSVQL A+D + N G + A S+GPYG
Sbjct: 75 QGFEARGYSEAESLALIAKSVQLAAQARDDYRRD---------NTQAGTLLVAGSVGPYG 125
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y + +AD++A+HRP + AL AG D LA ET+P+ E AL+ LL
Sbjct: 126 AYLADGSEYRGDY--QLPQADMMAFHRPRIAALHEAGADLLACETLPSFAEIEALIALLA 183
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSA---VTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
EFP +AW SF+ +D H S G + + V +C Q+ A+G+NC+ V+ +
Sbjct: 184 EFPQAQAWFSFTLRDSEHLSDGTPLRTVLERVNAC-----SQVVAVGLNCIALEKVTPAL 238
Query: 246 RCIKQSHPTVQTIVYPNKG 264
+ S + +VYPN G
Sbjct: 239 MHLS-SLTDLPLVVYPNSG 256
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 152/303 (50%), Gaps = 21/303 (6%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D PLWS+ L P + H D+ + + A + T
Sbjct: 17 VLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHFDYFKAGAQCAITASYQAT- 73
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
G E G+ +EA+ +A +V+ +A DY + + A S+GPYG
Sbjct: 74 -PQGFEARGY-----SEAESLALIAKSVQLAAQARDDYRRDNTQAGTLLVAGSVGPYGAY 127
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y + +AD++A+HRP + AL AG D LA ET+P+ E AL+ LL EF
Sbjct: 128 LADGSEYRGDY--QLPQADMMAFHRPRIAALHEAGADLLACETLPSFAEIEALIALLAEF 185
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSA---VTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
P +AW SF+ +D H S G + + V +C Q+ A+G+NC+ V+ +
Sbjct: 186 PQAQAWFSFTLRDSEHLSDGTPLRTVLERVNAC-----SQVVAVGLNCIALEKVTPALMH 240
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNIIGGCCEVTS 562
+ S + +VYPN G +D+V W D S+ Y+P+W G +IGGCC T
Sbjct: 241 LS-SLTDLPLVVYPNSGEQYDAVTKTWSSAHDTACSLTAYLPEWQTAGARLIGGCCRTTP 299
Query: 563 YEI 565
+I
Sbjct: 300 ADI 302
>gi|395228179|ref|ZP_10406503.1| CP4-6 prophage [Citrobacter sp. A1]
gi|424730676|ref|ZP_18159271.1| homocysteine s-methyltransferase [Citrobacter sp. L17]
gi|394718301|gb|EJF23938.1| CP4-6 prophage [Citrobacter sp. A1]
gi|422894869|gb|EKU34676.1| homocysteine s-methyltransferase [Citrobacter sp. L17]
Length = 310
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 158/327 (48%), Gaps = 25/327 (7%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P + + + LLDG+ +++ D LWS+ L PE E H
Sbjct: 1 MSQNNPL--SAILDKQDFLLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHL 56
Query: 308 DFIRGHIETAASIG----PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 363
D+ R + A + P G RD + EA A +VE +A
Sbjct: 57 DYYRAGAQCAITASYQATPAGFAARD-----------LDEAQSKALIGKSVELARKAREA 105
Query: 364 YLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 423
YLA + + A S+GPYG L DGSEY G Y S E A+HRP VEAL+ AG D
Sbjct: 106 YLAENPQAGTLLVAGSVGPYGAYLADGSEYRGDYQRSAEE--FQAFHRPRVEALLDAGAD 163
Query: 424 YLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQ 483
LA ET+P E AL +LL +P +AW SF+ +D H S G + V LLA+ Q
Sbjct: 164 LLACETLPNFAEISALAELLTAYPRARAWFSFTLRDSEHLSDGTPLRDVVA--LLADYPQ 221
Query: 484 IQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYS-ILHY 542
+ A+G+NC+ + + ++ + S + +VYPN G +D+V W + + + Y
Sbjct: 222 VVALGINCIALENTTAALQHL-HSLTALPLVVYPNSGEQYDAVSKTWHHHGEHCAHLADY 280
Query: 543 VPQWLEEGVNIIGGCCEVTSYEIQQMR 569
+PQW G ++GGCC T +I ++
Sbjct: 281 LPQWQATGARLVGGCCRTTPADIAALK 307
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 128/256 (50%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L PE E H D+ RAGA ++ YQA
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARDLDEAQSKALIGKSVELARKAREA---------YLAENPQAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y S E A+HRP VEAL+ AG D LA ET+P E AL +LL
Sbjct: 127 AYLADGSEYRGDYQRSAEE--FQAFHRPRVEALLDAGADLLACETLPNFAEISALAELLT 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+P +AW SF+ +D H S G + V LLA+ Q+ A+G+NC+ + + ++ +
Sbjct: 185 AYPRARAWFSFTLRDSEHLSDGTPLRDVVA--LLADYPQVVALGINCIALENTTAALQHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S + +VYPN G
Sbjct: 243 -HSLTALPLVVYPNSG 257
>gi|427796533|gb|JAA63718.1| Putative cysteine s-methyltransferase, partial [Rhipicephalus
pulchellus]
Length = 257
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 111/192 (57%), Gaps = 5/192 (2%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S+GPYG D SEY+G Y + +L+ WHRP V L+ AG D LA ETIPAE+EA
Sbjct: 55 AGSVGPYGAAQADLSEYTGAYAAVKSVEELVEWHRPRVRCLIAAGCDVLAFETIPAEREA 114
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTH--TSHGELISSAVTSCLLANPD-QIQAIGVNCVR 493
LALV+LLREFP +AWLSFS D T+ GE ++ + CLLA+ + QI AIGVNC
Sbjct: 115 LALVRLLREFPDARAWLSFSTSRDAPHCTAKGEPLAEVMNECLLADVNGQIFAIGVNCCP 174
Query: 494 PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNI 553
P V+ R I V + YPN G ++ S D + YVP+W++ V
Sbjct: 175 PQSVAAAFRSIGPLR--VPFVTYPNSGEMYTSSGWVPDDRLTRKPLAAYVPEWIDLNVRW 232
Query: 554 IGGCCEVTSYEI 565
IGGCC + +I
Sbjct: 233 IGGCCRTGTDDI 244
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 122/215 (56%), Gaps = 20/215 (9%)
Query: 54 AGADIIQSSCYQANVDNL-TKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFN 112
+GAD++ + YQANVDNL + LG EA L+ +S + +A+++ +
Sbjct: 1 SGADVVTTCSYQANVDNLQSHLGIGAFEAESLIARSCEAAVAAREQCGRP---------- 50
Query: 113 LLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE 172
+ A S+GPYG D SEY+G Y + +L+ WHRP V L+ AG D LA E
Sbjct: 51 ----GVLVAGSVGPYGAAQADLSEYTGAYAAVKSVEELVEWHRPRVRCLIAAGCDVLAFE 106
Query: 173 TIPAEKEALALVKLLREFPGQKAWLSFSCKDDTH--TSHGELISSAVTSCLLANPD-QIQ 229
TIPAE+EALALV+LLREFP +AWLSFS D T+ GE ++ + CLLA+ + QI
Sbjct: 107 TIPAEREALALVRLLREFPDARAWLSFSTSRDAPHCTAKGEPLAEVMNECLLADVNGQIF 166
Query: 230 AIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
AIGVNC P V+ R I V + YPN G
Sbjct: 167 AIGVNCCPPQSVAAAFRSIGPLR--VPFVTYPNSG 199
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 35/68 (51%)
Query: 300 EACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR 359
EA V R + A S+GPYG D SEY+G Y + +L+ WHRP V L+
Sbjct: 38 EAAVAAREQCGRPGVLVAGSVGPYGAAQADLSEYTGAYAAVKSVEELVEWHRPRVRCLIA 97
Query: 360 AGVDYLAL 367
AG D LA
Sbjct: 98 AGCDVLAF 105
>gi|385872474|gb|AFI90994.1| Homocysteine S-methyltransferase [Pectobacterium sp. SCC3193]
Length = 313
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 135/259 (52%), Gaps = 22/259 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D PLWS+ L P + H D+ AGA ++ YQA
Sbjct: 17 VLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHLDYFNAGAQCAITASYQATP 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
GYSE E+L L+ KSVQL A+D + N G + A S+GPYG
Sbjct: 75 QGFKARGYSEAESLTLIAKSVQLAAQARDDYRRD---------NSQAGVLLVAGSVGPYG 125
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y + +A+++A+HRP + AL AG D LA ET+P+ E AL+ LL
Sbjct: 126 AYLADGSEYRGDY--QLPQAEMMAFHRPRIAALHEAGADLLACETLPSFAEVEALIALLA 183
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSA---VTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
EFP +AW SF+ +D H S G + + V +C Q+ A+G+NC+ +V+ +
Sbjct: 184 EFPQAQAWFSFTLRDSEHLSDGTPLRTVLERVNAC-----PQVVAVGINCIALENVTPAL 238
Query: 246 RCIKQSHPTVQTIVYPNKG 264
+ S + +VYPN G
Sbjct: 239 TYLS-SLTNLPLVVYPNSG 256
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 147/303 (48%), Gaps = 21/303 (6%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D PLWS+ L P + H D+ + A + T
Sbjct: 17 VLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHLDYFNAGAQCAITASYQATP 74
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
G +EA+ + +V+ +A DY + A S+GPYG
Sbjct: 75 -------QGFKARGYSEAESLTLIAKSVQLAAQARDDYRRDNSQAGVLLVAGSVGPYGAY 127
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y + +A+++A+HRP + AL AG D LA ET+P+ E AL+ LL EF
Sbjct: 128 LADGSEYRGDY--QLPQAEMMAFHRPRIAALHEAGADLLACETLPSFAEVEALIALLAEF 185
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSA---VTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
P +AW SF+ +D H S G + + V +C Q+ A+G+NC+ +V+ +
Sbjct: 186 PQAQAWFSFTLRDSEHLSDGTPLRTVLERVNAC-----PQVVAVGINCIALENVTPALTY 240
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNIIGGCCEVTS 562
+ S + +VYPN G +D++ W D S+ Y+P+W G +IGGCC T
Sbjct: 241 LS-SLTNLPLVVYPNSGEQYDAITKTWSSGHDAACSLAAYLPEWQAAGARLIGGCCRTTP 299
Query: 563 YEI 565
+I
Sbjct: 300 ADI 302
>gi|433678974|ref|ZP_20510768.1| homocysteine methyltransferase [Xanthomonas translucens pv.
translucens DSM 18974]
gi|430815910|emb|CCP41304.1| homocysteine methyltransferase [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 317
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 156/320 (48%), Gaps = 29/320 (9%)
Query: 257 TIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIET 316
T + ++ +LDG+ +++ G LWS+ L +P+ + H D+ + +
Sbjct: 7 TALLADQRCIVLDGALATELEARGCNL--GDALWSAKVLLEQPQLIRQVHLDYFQAGAQC 64
Query: 317 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT 376
A + T L ++ +D LIA + + + A Y A+ + +
Sbjct: 65 AITASYQATPL----GFAARGLDLAQSQQLIA---RSAQLALEARDAYRAMHADAGALLV 117
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S+GPYG L DGSEY G Y ++ +A ++ +HRP + ALV AGVD LA ET+P+ E
Sbjct: 118 AGSVGPYGAYLADGSEYRGDY--ALPQAQMLDFHRPRIAALVAAGVDLLACETLPSAAEI 175
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP-- 494
+AL+ LL+EFP AW SF+ +D H S G + V LL Q+ A+G+NC+ P
Sbjct: 176 VALLALLQEFPQSTAWFSFTLRDAMHLSDGTALREVVA--LLDGHPQVVALGINCIAPEL 233
Query: 495 -----SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE-DEYSILHYVPQWLE 548
H++TL R + +VYPN G +D+ +W D +L V W
Sbjct: 234 GSAALQHLATLTR--------LPLVVYPNSGEHYDAAGKRWDGAGIDACGLLDRVDAWRA 285
Query: 549 EGVNIIGGCCEVTSYEIQQM 568
G +IGGCC T I Q+
Sbjct: 286 AGARLIGGCCRTTPRAIAQL 305
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 135/266 (50%), Gaps = 30/266 (11%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ +LDG+ +++ G LWS+ L +P+ + H D+ +AGA ++ YQ
Sbjct: 14 RCIVLDGALATELEARGCNL--GDALWSAKVLLEQPQLIRQVHLDYFQAGAQCAITASYQ 71
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
A G ++ L+ +S QL A+D + + G + A S+G
Sbjct: 72 ATPLGFAARGLDLAQSQQLIARSAQLALEARDA---------YRAMHADAGALLVAGSVG 122
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY G Y ++ +A ++ +HRP + ALV AGVD LA ET+P+ E +AL+
Sbjct: 123 PYGAYLADGSEYRGDY--ALPQAQMLDFHRPRIAALVAAGVDLLACETLPSAAEIVALLA 180
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP------- 238
LL+EFP AW SF+ +D H S G + V LL Q+ A+G+NC+ P
Sbjct: 181 LLQEFPQSTAWFSFTLRDAMHLSDGTALREVVA--LLDGHPQVVALGINCIAPELGSAAL 238
Query: 239 SHVSTLVRCIKQSHPTVQTIVYPNKG 264
H++TL R + +VYPN G
Sbjct: 239 QHLATLTR--------LPLVVYPNSG 256
>gi|353230829|emb|CCD77246.1| hypothetical protein Smp_210320 [Schistosoma mansoni]
Length = 360
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 138/237 (58%), Gaps = 9/237 (3%)
Query: 4 ICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+ ++++LDG F ++ + + +DGH WSS L +PE V+ H+ F+RAG D+I ++
Sbjct: 13 LTEIRVLDGGFGTESQKLSNLQIDGHLAWSSRLLMDDPELVVKIHKSFLRAGCDVISTNT 72
Query: 64 YQANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDIN-LNKTFNLLTGHIETA 121
YQA L K LG S EA +L+H +V L A+++EN + + + +L A
Sbjct: 73 YQAAPSTLGKALGISIGEAKNLMHTAVHLAQRAREEENNSVTASEFQRKLPVLI-----A 127
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
S+GPYG DGSEY+G Y + ++ +L+ +H + L+ +GVD++A ET+P KE
Sbjct: 128 GSLGPYGACAADGSEYTGSYANEVSFNELVEFHLSRAKILLESGVDFIAWETVPLLKEVS 187
Query: 182 ALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 238
++ +++R P W+S S D TS G+L++S +C +A +Q+ +GVNC P
Sbjct: 188 SICEVMRRLPSAYCWISVSSPDGEKTSGGDLLAS--VACEVAKCEQVFGVGVNCNIP 242
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 158/358 (44%), Gaps = 62/358 (17%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIG 321
+++LDG F ++ + + +DGH WSS L +PE V+ H+ F+R I T
Sbjct: 16 IRVLDGGFGTESQKLSNLQIDGHLAWSSRLLMDDPELVVKIHKSFLRAGCDVISTNTYQA 75
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
T+ + G + M A +A R E P + A S+G
Sbjct: 76 APSTLGKALGISIGEAKNLMHTAVHLA-QRAREEENNSVTASEFQRKLPVL---IAGSLG 131
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG DGSEY+G Y + ++ +L+ +H + L+ +GVD++A ET+P KE ++ +
Sbjct: 132 PYGACAADGSEYTGSYANEVSFNELVEFHLSRAKILLESGVDFIAWETVPLLKEVSSICE 191
Query: 442 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP-----SH 496
++R P W+S S D TS G+L++S +C +A +Q+ +GVNC P
Sbjct: 192 VMRRLPSAYCWISVSSPDGEKTSGGDLLAS--VACEVAKCEQVFGVGVNCNIPHDCIGKG 249
Query: 497 VSTL-VRCIKQSHPTVQTIV--YPNKGGVW----------------DSVHMKWLD----- 532
++ L + K+S T ++ Y N G +W H W
Sbjct: 250 LANLNSQTCKESENTSSKLILFYANDGQLWIPNDGDKKRGHFVNYSQYNHDSWFQNTIQW 309
Query: 533 ------TEDEYSILHY-------VPQWLEEGVNIIGGCCEVTSYEIQQMRIMI--DEF 575
++DE+ LHY + QW +GGCC V I+++ + DEF
Sbjct: 310 AKRRETSDDEH--LHYSVNDKPPLAQW-------VGGCCNVRPECIRRLAKWMKPDEF 358
>gi|444352981|ref|YP_007389125.1| Homocysteine S-methyltransferase (EC 2.1.1.10) [Enterobacter
aerogenes EA1509E]
gi|443903811|emb|CCG31585.1| Homocysteine S-methyltransferase (EC 2.1.1.10) [Enterobacter
aerogenes EA1509E]
Length = 310
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 160/322 (49%), Gaps = 17/322 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + + LLDG+ +++ D LWS+ L P+ + H
Sbjct: 1 MPQNNPL--TAILETQPFVLLDGAMATELEARGCNLADS--LWSAKVLLENPQLIRDVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + EA A +VE +A YLA
Sbjct: 57 DYFRAGAQVAITASYQATP-------AGFAARGLDEAQSKALIGKSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G Y S EA A+HRP VEAL+ AG D LA
Sbjct: 110 NPQAGTLLVAGSVGPYGAYLADGSEYRGDYQRS-AEA-FQAFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P+ E AL LLR++P +AW S + +D H S G + V +LA+ Q+ A+
Sbjct: 168 ETLPSFAEITALAALLRDYPRARAWFSLTLRDAEHLSDGTPLREVVA--VLADNPQVLAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQW 546
G+NC+ + + ++ + S ++ +VYPN G +D++ W + + L Y+PQW
Sbjct: 226 GINCIALENTTAALQHL-HSLTSLPLVVYPNSGEHYDALTKTWHHHGEACATLAAYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
L G +IGGCC T +I +
Sbjct: 285 LAAGARLIGGCCRTTPQDIAAL 306
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 133/256 (51%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L P+ + H D+ RAGA + ++ YQA
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLLENPQLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSKALIGKSVELARKAREA---------YLAENPQAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y S EA A+HRP VEAL+ AG D LA ET+P+ E AL LLR
Sbjct: 127 AYLADGSEYRGDYQRS-AEA-FQAFHRPRVEALLDAGADLLACETLPSFAEITALAALLR 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
++P +AW S + +D H S G + V +LA+ Q+ A+G+NC+ + + ++ +
Sbjct: 185 DYPRARAWFSLTLRDAEHLSDGTPLREVVA--VLADNPQVLALGINCIALENTTAALQHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S ++ +VYPN G
Sbjct: 243 -HSLTSLPLVVYPNSG 257
>gi|256079598|ref|XP_002576073.1| hypothetical protein [Schistosoma mansoni]
Length = 741
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 137/235 (58%), Gaps = 9/235 (3%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++++LDG F ++ + + +DGH WSS L +PE V+ H+ F+RAG D+I ++ YQ
Sbjct: 396 EIRVLDGGFGTESQKLSNLQIDGHLAWSSRLLMDDPELVVKIHKSFLRAGCDVISTNTYQ 455
Query: 66 ANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDIN-LNKTFNLLTGHIETAAS 123
A L K LG S EA +L+H +V L A+++EN + + + +L A S
Sbjct: 456 AAPSTLGKALGISIGEAKNLMHTAVHLAQRAREEENNSVTASEFQRKLPVLI-----AGS 510
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG DGSEY+G Y + ++ +L+ +H + L+ +GVD++A ET+P KE ++
Sbjct: 511 LGPYGACAADGSEYTGSYANEVSFNELVEFHLSRAKILLESGVDFIAWETVPLLKEVSSI 570
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 238
+++R P W+S S D TS G+L++S +C +A +Q+ +GVNC P
Sbjct: 571 CEVMRRLPSAYCWISVSSPDGEKTSGGDLLAS--VACEVAKCEQVFGVGVNCNIP 623
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 159/358 (44%), Gaps = 62/358 (17%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIG 321
+++LDG F ++ + + +DGH WSS L +PE V+ H+ F+R I T
Sbjct: 397 IRVLDGGFGTESQKLSNLQIDGHLAWSSRLLMDDPELVVKIHKSFLRAGCDVISTNTYQA 456
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
T+ + G + M A +A E ++ + + A S+G
Sbjct: 457 APSTLGKALGISIGEAKNLMHTAVHLAQRAREEENNSVTASEF----QRKLPVLIAGSLG 512
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG DGSEY+G Y + ++ +L+ +H + L+ +GVD++A ET+P KE ++ +
Sbjct: 513 PYGACAADGSEYTGSYANEVSFNELVEFHLSRAKILLESGVDFIAWETVPLLKEVSSICE 572
Query: 442 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP-----SH 496
++R P W+S S D TS G+L++S +C +A +Q+ +GVNC P
Sbjct: 573 VMRRLPSAYCWISVSSPDGEKTSGGDLLAS--VACEVAKCEQVFGVGVNCNIPHDCIGKG 630
Query: 497 VSTL-VRCIKQSHPTVQTIV--YPNKGGVW----------------DSVHMKWLD----- 532
++ L + K+S T ++ Y N G +W H W
Sbjct: 631 LANLNSQTCKESENTSSKLILFYANDGQLWIPNDGDKKRGHFVNYSQYNHDSWFQNTIQW 690
Query: 533 ------TEDEYSILHY-------VPQWLEEGVNIIGGCCEVTSYEIQQMRIMI--DEF 575
++DE+ LHY + QW +GGCC V I+++ + DEF
Sbjct: 691 AKRRETSDDEH--LHYSVNDKPPLAQW-------VGGCCNVRPECIRRLAKWMKPDEF 739
>gi|427407236|ref|ZP_18897441.1| hypothetical protein HMPREF9161_01801 [Selenomonas sp. F0473]
gi|425707711|gb|EKU70755.1| hypothetical protein HMPREF9161_01801 [Selenomonas sp. F0473]
Length = 327
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 139/273 (50%), Gaps = 25/273 (9%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG+F +++ D LWS+ L P+ + H D++RAGAD++ S+ YQA
Sbjct: 13 VLILDGAFATELEARGFSVNDA--LWSAKALFERPDLVRDIHLDYLRAGADVVTSASYQA 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD-----------KENQTPDINLNKTFNLLT 115
V+ K G++E+EA L+ +SV++ A+D + + + +
Sbjct: 71 TVEGFMKKGFTEEEAAALIVRSVEIAREARDIYCLTILADEYHAQEAREEGCAEQRGTIG 130
Query: 116 GHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 175
G AAS+GPYG L DGSEY G Y M E L +H + L D LA ET+P
Sbjct: 131 GEPLVAASVGPYGAYLADGSEYRGDY--GMDEDALTVFHAERLTLLAEGQPDLLACETLP 188
Query: 176 AEKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 231
EA A+V+ LRE P AW SFSC+D H S G I+ LA+ + A+
Sbjct: 189 CLTEARAIVRALREKEIHIP---AWFSFSCRDGAHISDGTPIADCAR--FLADVPEAAAV 243
Query: 232 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
GVNC P +V +L+R I+ + +VYPN G
Sbjct: 244 GVNCTAPQYVESLIRTIR-AETDKPIVVYPNSG 275
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 144/329 (43%), Gaps = 45/329 (13%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
+ V +LDG+F +++ D LWS+ L P+ + H D++R + S
Sbjct: 10 ERDVLILDGAFATELEARGFSVNDA--LWSAKALFERPDLVRDIHLDYLRAGADVVTSAS 67
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALI------------- 368
TV G TE + A +VE + R D L
Sbjct: 68 YQATV-------EGFMKKGFTEEEAAALIVRSVE-IAREARDIYCLTILADEYHAQEARE 119
Query: 369 ------KPSISSQ--TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 420
+ +I + AAS+GPYG L DGSEY G Y M E L +H + L
Sbjct: 120 EGCAEQRGTIGGEPLVAASVGPYGAYLADGSEYRGDY--GMDEDALTVFHAERLTLLAEG 177
Query: 421 GVDYLALETIPAEKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSC 476
D LA ET+P EA A+V+ LRE P AW SFSC+D H S G I+
Sbjct: 178 QPDLLACETLPCLTEARAIVRALREKEIHIP---AWFSFSCRDGAHISDGTPIADCAR-- 232
Query: 477 LLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDE 536
LA+ + A+GVNC P +V +L+R I+ + +VYPN G +D+ W + ++
Sbjct: 233 FLADVPEAAAVGVNCTAPQYVESLIRTIR-AETDKPIVVYPNSGENYDASDKTWHGSAED 291
Query: 537 YSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
++ + G +IGGCC + +I
Sbjct: 292 FAAGARRWR--AAGARLIGGCCRTSPRDI 318
>gi|423127659|ref|ZP_17115338.1| homocysteine S-methyltransferase [Klebsiella oxytoca 10-5250]
gi|376394698|gb|EHT07348.1| homocysteine S-methyltransferase [Klebsiella oxytoca 10-5250]
Length = 310
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 155/322 (48%), Gaps = 17/322 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + + LLDG+ +++ D LWS+ L PE E H
Sbjct: 1 MSQNNPL--TALLDARPFILLDGAMATELEGRGCNLADS--LWSAKVLVDNPELIREVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + EA A +VE +A YLA
Sbjct: 57 DYFRAGAQVAITASYQATP-------AGFAARGLDEAQSKALIGKSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G Y+ S E A+HRP VEAL+ AG D LA
Sbjct: 110 NPQAGALLVAGSVGPYGAYLADGSEYRGDYLRSHEE--FQAFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P E AL +LL +P +AW SF+ +D H S G + + +LAN Q+ A+
Sbjct: 168 ETLPNFAEIKALAELLTAYPRARAWFSFTLRDAQHLSDGTPLREVIG--VLANYPQVVAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQW 546
G+NC+ + + + S + +VYPN G +D W E ++ Y+PQW
Sbjct: 226 GINCIALESTTAALAHL-HSLTALPLVVYPNSGEHYDPESKTWHHHGEACETLAGYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
L G +IGGCC T +I ++
Sbjct: 285 LAAGAKLIGGCCRTTPKDIAEL 306
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 129/256 (50%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L PE E H D+ RAGA + ++ YQA
Sbjct: 18 LLDGAMATELEGRGCNLADS--LWSAKVLVDNPELIREVHLDYFRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSKALIGKSVELARKAREAYLAE---------NPQAGALLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y+ S E A+HRP VEAL+ AG D LA ET+P E AL +LL
Sbjct: 127 AYLADGSEYRGDYLRSHEE--FQAFHRPRVEALLDAGADLLACETLPNFAEIKALAELLT 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+P +AW SF+ +D H S G + + +LAN Q+ A+G+NC+ + + +
Sbjct: 185 AYPRARAWFSFTLRDAQHLSDGTPLREVIG--VLANYPQVVALGINCIALESTTAALAHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S + +VYPN G
Sbjct: 243 -HSLTALPLVVYPNSG 257
>gi|198423756|ref|XP_002127286.1| PREDICTED: similar to CG10623 CG10623-PA [Ciona intestinalis]
Length = 305
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 140/260 (53%), Gaps = 20/260 (7%)
Query: 7 VKLLDGSFTSQV---SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+K+LDG + + +V+ PLWS+ L +PE ++ H FI+AG+D++ +
Sbjct: 4 IKILDGGLCTDLFINGGFVRAEVNKDPLWSARVLYEKPEEIMKAHLRFIKAGSDVVSTCS 63
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
YQA+V GY E + K+ +++ S+ D Q + + A S
Sbjct: 64 YQASVQ-----GYMEHAQVTK-EKAEKIIGSSVDVAKQAVQESGRRVL--------VAGS 109
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
I PYG +L D SEY+G Y+D+ +E L +H+ N+ L GVD A ET+P+ KEAL L
Sbjct: 110 ISPYGAILHDMSEYTGSYIDTTSEQQLSDFHKTNIRILASKGVDLFAFETLPSLKEALVL 169
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
++LRE+P KAW+SFS K+ THT +GE + L N QI AIG+NC + +S+
Sbjct: 170 AEILREYPTLKAWVSFSNKNGTHTCYGEPFEEVFKA--LGNYHQIIAIGLNCCKSETISS 227
Query: 244 LVRCIKQSHPTVQT-IVYPN 262
++ + Q I+YPN
Sbjct: 228 FIQLAHGNLAKHQRLIIYPN 247
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 160/326 (49%), Gaps = 36/326 (11%)
Query: 265 VKLLDGSFTSQV---SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
+K+LDG + + +V+ PLWS+ L +PE ++ H FI+
Sbjct: 4 IKILDGGLCTDLFINGGFVRAEVNKDPLWSARVLYEKPEEIMKAHLRFIKA--------- 54
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL--ALIKPSISSQTAAS 379
G+ + Y M A + + E ++ + VD A+ + A S
Sbjct: 55 --GSDVVSTCSYQASVQGYMEHAQVT---KEKAEKIIGSSVDVAKQAVQESGRRVLVAGS 109
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
I PYG +L D SEY+G Y+D+ +E L +H+ N+ L GVD A ET+P+ KEAL L
Sbjct: 110 ISPYGAILHDMSEYTGSYIDTTSEQQLSDFHKTNIRILASKGVDLFAFETLPSLKEALVL 169
Query: 440 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
++LRE+P KAW+SFS K+ THT +GE + L N QI AIG+NC + +S+
Sbjct: 170 AEILREYPTLKAWVSFSNKNGTHTCYGEPFEEVFKA--LGNYHQIIAIGLNCCKSETISS 227
Query: 500 LVRCIKQSHPTVQT-IVYPNK--GGVWDSVH--MKWLDTEDEYSILHYVPQWLEEG-VNI 553
++ + Q I+YPN GG +S ++WL V WLE +
Sbjct: 228 FIQLAHGNLAKHQRLIIYPNNCAGGNVNSSEAPLEWLPK---------VKTWLESNLIGW 278
Query: 554 IGGCCEVTSYEIQQMRIMIDEFNTKK 579
IGGCC + ++I Q++ + E+ +K
Sbjct: 279 IGGCCMTSPFQIGQIKQAVMEWQCEK 304
>gi|429092540|ref|ZP_19155168.1| Homocysteine S-methyltransferase [Cronobacter dublinensis 1210]
gi|426742739|emb|CCJ81281.1| Homocysteine S-methyltransferase [Cronobacter dublinensis 1210]
Length = 310
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 149/307 (48%), Gaps = 23/307 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG----P 322
+LDG+ +++ D LWS+ L +PE H D+ R + A + P
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
G R E + + + +A R E +R D L+ A S+GP
Sbjct: 76 AGFAARGLDEAQSRALIARS----VALARQAREDFLREQPDAGPLL-------VAGSVGP 124
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY G Y +T+A A+HRP VEAL+ AGVD LA ET+P+ EA AL L
Sbjct: 125 YGAYLADGSEYRGDY--QLTDAQFAAFHRPRVEALLEAGVDLLACETLPSLAEARALAVL 182
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
L ++P +AW SF+ +D H S G ++ + LA QI A+G+NCV +
Sbjct: 183 LAQYPQARAWFSFTLRDSEHISDGSPLADVAAA--LAPYPQIVALGINCVPLEDACAALA 240
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEGVNIIGGCCEVT 561
+ + P + +VYPN G +D+V W D +++ H++ W G +IGGCC T
Sbjct: 241 RLHDATP-LPLVVYPNSGEQYDAVSKTWRHDGHTCHTLSHHLDAWRAAGAALIGGCCRTT 299
Query: 562 SYEIQQM 568
+I +
Sbjct: 300 PADIAAL 306
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 140/280 (50%), Gaps = 26/280 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L +PE H D+ RAGA ++ YQA
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASIGPY 127
G E ++ L+ +SV L A+ D + PD G + A S+GPY
Sbjct: 76 AGFAARGLDEAQSRALIARSVALARQAREDFLREQPD----------AGPLLVAGSVGPY 125
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y +T+A A+HRP VEAL+ AGVD LA ET+P+ EA AL LL
Sbjct: 126 GAYLADGSEYRGDY--QLTDAQFAAFHRPRVEALLEAGVDLLACETLPSLAEARALAVLL 183
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
++P +AW SF+ +D H S G ++ + LA QI A+G+NCV +
Sbjct: 184 AQYPQARAWFSFTLRDSEHISDGSPLADVAAA--LAPYPQIVALGINCVPLEDACAALAR 241
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGH 287
+ + P + +VYPN G + S+ RH DGH
Sbjct: 242 LHDATP-LPLVVYPNSGEQY---DAVSKTWRH-----DGH 272
>gi|227326966|ref|ZP_03830990.1| homocysteine methyltransferase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 315
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 153/303 (50%), Gaps = 21/303 (6%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D PLWS+ L P + H D+ + + A + T
Sbjct: 17 VLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHLDYFKAGAQCAITASYQAT- 73
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
G E G+ EA+ +A +V+ +A DY + + A S+GPYG
Sbjct: 74 -PQGFEARGY-----GEAESLALIAKSVQLAAQARDDYRRDNPQAGTLLVAGSVGPYGAY 127
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y + +A+++A+HRP + AL AG D LA ET+P+ E AL+ LL EF
Sbjct: 128 LADGSEYRGDY--QLPQAEMMAFHRPRIAALHEAGADLLACETLPSFAEIEALIALLAEF 185
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSA---VTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
P +AW SF+ +D H S G + + V +C Q+ A+G+NC+ +V+ +
Sbjct: 186 PQAQAWFSFTLRDSEHLSDGTPLRTVLERVNAC-----SQVVAVGINCIALENVTPALTH 240
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNIIGGCCEVTS 562
+ S + +VYPN G +D+V W D+ S+ Y+P+W G +IGGCC T
Sbjct: 241 LS-SLTDLPLVVYPNSGEQYDAVTKTWSSAHDDACSLTAYLPEWQAAGARLIGGCCRTTP 299
Query: 563 YEI 565
+I
Sbjct: 300 ADI 302
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 135/259 (52%), Gaps = 22/259 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D PLWS+ L P + H D+ +AGA ++ YQA
Sbjct: 17 VLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHLDYFKAGAQCAITASYQATP 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
GY E E+L L+ KSVQL A+D + N G + A S+GPYG
Sbjct: 75 QGFEARGYGEAESLALIAKSVQLAAQARDDYRRD---------NPQAGTLLVAGSVGPYG 125
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y + +A+++A+HRP + AL AG D LA ET+P+ E AL+ LL
Sbjct: 126 AYLADGSEYRGDY--QLPQAEMMAFHRPRIAALHEAGADLLACETLPSFAEIEALIALLA 183
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSA---VTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
EFP +AW SF+ +D H S G + + V +C Q+ A+G+NC+ +V+ +
Sbjct: 184 EFPQAQAWFSFTLRDSEHLSDGTPLRTVLERVNAC-----SQVVAVGINCIALENVTPAL 238
Query: 246 RCIKQSHPTVQTIVYPNKG 264
+ S + +VYPN G
Sbjct: 239 THLS-SLTDLPLVVYPNSG 256
>gi|386016841|ref|YP_005935135.1| homocysteine S-methyltransferase MmuM [Pantoea ananatis AJ13355]
gi|327394917|dbj|BAK12339.1| homocysteine S-methyltransferase MmuM [Pantoea ananatis AJ13355]
Length = 390
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 152/320 (47%), Gaps = 26/320 (8%)
Query: 246 RCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVET 305
R ++QS P + LDG+ +++ D LWS+ L PE +
Sbjct: 87 RALQQSAPLI------------LDGALATELEARGCDLADA--LWSAKVLVENPELIYQV 132
Query: 306 HRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL 365
H D+ A + T G + E +A +VE RA DYL
Sbjct: 133 HYDYFAAGARCAITASYQATP-------QGFAARGLNETQSLALIAQSVELAKRARADYL 185
Query: 366 ALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL 425
A + A S+GPYG L DGSEY G Y ++ E +++A+HRP + AL+ AGVD L
Sbjct: 186 ATQAEAKILLVAGSVGPYGAFLADGSEYRGDY--ALPENEMMAFHRPRINALLTAGVDVL 243
Query: 426 ALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ 485
A ET+P+ EA ALV LL EFP +AW SF+ +D H S G + V + L A P Q+
Sbjct: 244 ACETLPSFAEAQALVALLGEFPDSRAWFSFTLRDAEHISDGTPLRE-VAAYLNAQP-QVV 301
Query: 486 AIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQ 545
A+G+NC+ V+ ++ + Q +VYPN G +D+ W ++ +
Sbjct: 302 ALGINCIALESVTPALQQL-QRLTDKPLVVYPNSGEQYDASSKTWHSAPSGCTLHDKFSE 360
Query: 546 WLEEGVNIIGGCCEVTSYEI 565
W + G +IGGCC + +I
Sbjct: 361 WQQAGARLIGGCCRTSPKDI 380
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 135/256 (52%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE + H D+ AGA ++ YQA
Sbjct: 96 ILDGALATELEARGCDLADA--LWSAKVLVENPELIYQVHYDYFAAGARCAITASYQATP 153
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G +E ++L L+ +SV+L A+ T L+ G S+GPYG
Sbjct: 154 QGFAARGLNETQSLALIAQSVELAKRARADYLAT---QAEAKILLVAG------SVGPYG 204
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y ++ E +++A+HRP + AL+ AGVD LA ET+P+ EA ALV LL
Sbjct: 205 AFLADGSEYRGDY--ALPENEMMAFHRPRINALLTAGVDVLACETLPSFAEAQALVALLG 262
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP +AW SF+ +D H S G + V + L A P Q+ A+G+NC+ V+ ++ +
Sbjct: 263 EFPDSRAWFSFTLRDAEHISDGTPLRE-VAAYLNAQP-QVVALGINCIALESVTPALQQL 320
Query: 249 KQSHPTVQTIVYPNKG 264
Q +VYPN G
Sbjct: 321 -QRLTDKPLVVYPNSG 335
>gi|336248939|ref|YP_004592649.1| homocysteine methyltransferase [Enterobacter aerogenes KCTC 2190]
gi|334734995|gb|AEG97370.1| homocysteine methyltransferase [Enterobacter aerogenes KCTC 2190]
Length = 310
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 158/322 (49%), Gaps = 17/322 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + + LLDG+ +++ D LWS+ L P+ + H
Sbjct: 1 MPQNNPL--TAILETQPFVLLDGAMATELEARGCNLADS--LWSAKVLLENPQLIRDVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + EA A +VE +A YLA
Sbjct: 57 DYFRAGAQVAITASYQATP-------AGFAARGLDEAQSKALIGKSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G Y S A+HRP VEAL+ AG D LA
Sbjct: 110 NPQAGTLLVAGSVGPYGAYLADGSEYRGDYQRSAEV--FQAFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P+ E AL LLR++P +AW S + +D H S G + V +LA+ Q+ A+
Sbjct: 168 ETLPSFAEITALAALLRDYPRARAWFSLTLRDAEHLSDGTPLREVVA--VLADNPQVLAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQW 546
G+NC+ + + ++ + S ++ +VYPN G +D++ W + + L Y+PQW
Sbjct: 226 GINCIALENTTAALQHL-HSLTSLPLVVYPNSGEHYDALTKTWHHHGEACATLAAYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
L G +IGGCC T +I +
Sbjct: 285 LAAGARLIGGCCRTTPQDIAAL 306
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 131/256 (51%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L P+ + H D+ RAGA + ++ YQA
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLLENPQLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSKALIGKSVELARKAREA---------YLAENPQAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y S A+HRP VEAL+ AG D LA ET+P+ E AL LLR
Sbjct: 127 AYLADGSEYRGDYQRSAEV--FQAFHRPRVEALLDAGADLLACETLPSFAEITALAALLR 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
++P +AW S + +D H S G + V +LA+ Q+ A+G+NC+ + + ++ +
Sbjct: 185 DYPRARAWFSLTLRDAEHLSDGTPLREVVA--VLADNPQVLALGINCIALENTTAALQHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S ++ +VYPN G
Sbjct: 243 -HSLTSLPLVVYPNSG 257
>gi|398790663|ref|ZP_10551638.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Pantoea sp. YR343]
gi|398218269|gb|EJN04780.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Pantoea sp. YR343]
Length = 311
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 147/303 (48%), Gaps = 22/303 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS--IGP 322
+LDG+ +++ D LWS+ L PE + H D+ H+ AS P
Sbjct: 17 ILDGALATELEARGCNLADT--LWSAKVLVENPELIYQVHHDYFAAGAHVAITASYQATP 74
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
G R + EA +A +V+ RA DY A + A S+GP
Sbjct: 75 QGFAAR-----------GLDEAQALALITQSVQLAQRARDDYRASSGSTAPLLVAGSVGP 123
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L +G+EY G Y ++ E + A+HRP V AL+ AGVD LA ET+P+ EA ALV L
Sbjct: 124 YGAFLANGAEYRGDY--ALPEEQMKAFHRPRVTALLEAGVDLLACETLPSFAEAQALVSL 181
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
L EFP AW SF+ +D H S G +S V + A P Q+ AIG+NCV V+ +R
Sbjct: 182 LAEFPDSSAWFSFTLRDAEHISDGTPLSK-VAELVNAAP-QVVAIGINCVALESVTPALR 239
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTS 562
+ Q+ +VYPN G +D+ W ++ +W + G +IGGCC T
Sbjct: 240 SL-QALCDKPLLVYPNSGEQYDASSKTWHSAPSGCTLHDKFAEWQQAGARLIGGCCRTTP 298
Query: 563 YEI 565
+I
Sbjct: 299 QDI 301
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/256 (37%), Positives = 134/256 (52%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE + H D+ AGA + ++ YQA
Sbjct: 17 ILDGALATELEARGCNLADT--LWSAKVLVENPELIYQVHHDYFAAGAHVAITASYQATP 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E +AL L+ +SVQL A+D + T + A S+GPYG
Sbjct: 75 QGFAARGLDEAQALALITQSVQLAQRARDDYRASSGS---------TAPLLVAGSVGPYG 125
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L +G+EY G Y ++ E + A+HRP V AL+ AGVD LA ET+P+ EA ALV LL
Sbjct: 126 AFLANGAEYRGDY--ALPEEQMKAFHRPRVTALLEAGVDLLACETLPSFAEAQALVSLLA 183
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP AW SF+ +D H S G +S V + A P Q+ AIG+NCV V+ +R +
Sbjct: 184 EFPDSSAWFSFTLRDAEHISDGTPLSK-VAELVNAAP-QVVAIGINCVALESVTPALRSL 241
Query: 249 KQSHPTVQTIVYPNKG 264
Q+ +VYPN G
Sbjct: 242 -QALCDKPLLVYPNSG 256
>gi|455641884|gb|EMF21055.1| homocysteine methyltransferase [Citrobacter freundii GTC 09479]
Length = 310
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 157/327 (48%), Gaps = 25/327 (7%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P + + + LLDG+ +++ D LWS+ L PE E H
Sbjct: 1 MSQNNPL--SAILDKQDFLLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHL 56
Query: 308 DFIRGHIETAASIG----PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 363
D+ R + A + P G RD +D LI +VE +A
Sbjct: 57 DYYRAGAQCAITASYQATPAGFAARD--------LDEAQSKVLIG---KSVELARKAREA 105
Query: 364 YLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 423
YLA + + A S+GPYG L DGSEY G Y S E A+HRP VEAL+ AG D
Sbjct: 106 YLAENPQAGTLLVAGSVGPYGAYLADGSEYRGDYQRSAEE--FQAFHRPRVEALLDAGAD 163
Query: 424 YLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQ 483
LA ET+P E AL +LL +P +AW SF+ +D H S G + V LLA+ Q
Sbjct: 164 LLACETLPNFAEISALAELLTAYPRARAWFSFTLRDSEHLSDGTPLRDVVA--LLADYPQ 221
Query: 484 IQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HY 542
+ A+G+NC+ + + ++ + + +VYPN G +D+V W + + L Y
Sbjct: 222 VVALGINCIALENTTAALQHL-HGLTALPLVVYPNSGEQYDAVSKTWHHHGEHCARLADY 280
Query: 543 VPQWLEEGVNIIGGCCEVTSYEIQQMR 569
+PQW G +IGGCC T +I ++
Sbjct: 281 LPQWQAAGARLIGGCCRTTPKDIAVLK 307
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 127/256 (49%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L PE E H D+ RAGA ++ YQA
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARDLDEAQSKVLIGKSVELARKAREA---------YLAENPQAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y S E A+HRP VEAL+ AG D LA ET+P E AL +LL
Sbjct: 127 AYLADGSEYRGDYQRSAEE--FQAFHRPRVEALLDAGADLLACETLPNFAEISALAELLT 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+P +AW SF+ +D H S G + V LLA+ Q+ A+G+NC+ + + ++ +
Sbjct: 185 AYPRARAWFSFTLRDSEHLSDGTPLRDVVA--LLADYPQVVALGINCIALENTTAALQHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
+ +VYPN G
Sbjct: 243 -HGLTALPLVVYPNSG 257
>gi|237730325|ref|ZP_04560806.1| S-methylmethionine:homocysteine methyltransferase [Citrobacter sp.
30_2]
gi|226905864|gb|EEH91782.1| S-methylmethionine:homocysteine methyltransferase [Citrobacter sp.
30_2]
Length = 310
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 149/306 (48%), Gaps = 15/306 (4%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG+ +++ D LWS+ L PE E H D+ R + A +
Sbjct: 16 ILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQA 73
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
T +G + EA A +VE +A YLA + + A S+GPYG
Sbjct: 74 TP-------AGFAARGLDEAQSKALIGKSVELARKAREAYLAENPQAGTLLVAGSVGPYG 126
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
L DGSEY G Y S+ A+HRP VEAL+ AG D LA ET+P E AL +LL
Sbjct: 127 AYLADGSEYRGDYHCSVEA--FQAFHRPRVEALLDAGADLLACETLPNFAEIEALAELLT 184
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 504
+P +AW SF+ +D H S G L+ V LLA Q+ A+G+NC+ + + ++ +
Sbjct: 185 AYPRARAWFSFTLRDSEHLSDGTLLRDVVA--LLAGYPQVVALGINCIALENTTAALQHL 242
Query: 505 KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQWLEEGVNIIGGCCEVTSY 563
+ +VYPN G +D+V W + + L Y+PQW G +IGGCC T
Sbjct: 243 -HGLTALPLVVYPNSGEHYDAVSKTWHHHGEHCAQLADYLPQWQAAGARLIGGCCRTTPA 301
Query: 564 EIQQMR 569
+I ++
Sbjct: 302 DIAALK 307
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 129/258 (50%), Gaps = 16/258 (6%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ D LWS+ L PE E H D+ RAGA ++ YQA
Sbjct: 16 ILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQA 73
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
G E ++ L+ KSV+L A++ N G + A S+GP
Sbjct: 74 TPAGFAARGLDEAQSKALIGKSVELARKAREA---------YLAENPQAGTLLVAGSVGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y S+ A+HRP VEAL+ AG D LA ET+P E AL +L
Sbjct: 125 YGAYLADGSEYRGDYHCSVEA--FQAFHRPRVEALLDAGADLLACETLPNFAEIEALAEL 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L +P +AW SF+ +D H S G L+ V LLA Q+ A+G+NC+ + + ++
Sbjct: 183 LTAYPRARAWFSFTLRDSEHLSDGTLLRDVVA--LLAGYPQVVALGINCIALENTTAALQ 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
+ + +VYPN G
Sbjct: 241 HL-HGLTALPLVVYPNSG 257
>gi|157147045|ref|YP_001454364.1| homocysteine methyltransferase [Citrobacter koseri ATCC BAA-895]
gi|157084250|gb|ABV13928.1| hypothetical protein CKO_02822 [Citrobacter koseri ATCC BAA-895]
Length = 310
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 106/303 (34%), Positives = 149/303 (49%), Gaps = 15/303 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
LLDG+ +++ D LWS+ L P E H D+ R + A + T
Sbjct: 18 LLDGAMATELEARGCDLADS--LWSAKVLVENPALIREVHLDYYRAGAQCAITASYQATP 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+G EA A +VE +A YLA + + A S+GPYG
Sbjct: 76 -------AGLAARGFDEAQSKALIGKSVELARKAREAYLAENPQAGTLLVAGSVGPYGAY 128
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DG+EY G YV T A+HRP VEAL+ AGVD LA ET+P E AL +LL E+
Sbjct: 129 LADGAEYRGDYV--CTPETFQAFHRPRVEALLDAGVDLLACETLPNFIEIKALAELLTEY 186
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P +AW SF+ +D H S G + V + L A P Q+ A GVNC+ +V+ ++ +
Sbjct: 187 PRARAWFSFTLRDSEHLSDGTPLRD-VAAFLNACP-QVVATGVNCIALENVTAALQHL-H 243
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQWLEEGVNIIGGCCEVTSYEI 565
+ +VYPN G +D+V W + + L Y+PQWL G +IGGCC T +I
Sbjct: 244 GLTALPLVVYPNSGERYDAVSKTWHHHGEACATLAEYLPQWLAAGAKLIGGCCRTTPKDI 303
Query: 566 QQM 568
++
Sbjct: 304 AEL 306
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 132/258 (51%), Gaps = 16/258 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L P E H D+ RAGA ++ YQA
Sbjct: 18 LLDGAMATELEARGCDLADS--LWSAKVLVENPALIREVHLDYYRAGAQCAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
L G+ E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGLAARGFDEAQSKALIGKSVELARKAREAYLAE---------NPQAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DG+EY G YV T A+HRP VEAL+ AGVD LA ET+P E AL +LL
Sbjct: 127 AYLADGAEYRGDYV--CTPETFQAFHRPRVEALLDAGVDLLACETLPNFIEIKALAELLT 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E+P +AW SF+ +D H S G + V + L A P Q+ A GVNC+ +V+ ++ +
Sbjct: 185 EYPRARAWFSFTLRDSEHLSDGTPLRD-VAAFLNACP-QVVATGVNCIALENVTAALQHL 242
Query: 249 KQSHPTVQTIVYPNKGVK 266
+ +VYPN G +
Sbjct: 243 -HGLTALPLVVYPNSGER 259
>gi|313892138|ref|ZP_07825731.1| homocysteine S-methyltransferase [Dialister microaerophilus UPII
345-E]
gi|313119276|gb|EFR42475.1| homocysteine S-methyltransferase [Dialister microaerophilus UPII
345-E]
Length = 306
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 137/265 (51%), Gaps = 25/265 (9%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K+ ++DGSF S++ + + D LWS+ L PE + H + +GA I + YQ
Sbjct: 12 KLLVIDGSFASELEKAGLNLCDS--LWSAKALYENPELVTKVHESYFESGAGIAITGSYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIE----TA 121
A+V L K G++ ++A++L+ SV+L A++ N L H E A
Sbjct: 70 AHVQGLLKKGFTHEKAIELIKLSVKLAKKARE--------------NCLKKHPERKLAIA 115
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
A++GPYG L DGSEY G+Y S+ E L +H +EAL D+ A ETIP+ E
Sbjct: 116 AAVGPYGAYLADGSEYVGNYGLSVKE--LEEFHEEKIEALASENPDFFAFETIPSFDEVR 173
Query: 182 ALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 241
A V +L+ W +FSCKD+ H S G IS L +Q+ AIGVNC +P ++
Sbjct: 174 AYVNILKRHENITGWFTFSCKDEKHISEGVEISEVAK--FLDKENQVHAIGVNCTKPEYI 231
Query: 242 STLVRCIKQSHPTVQTIVYPNKGVK 266
L+ IK++ VYPN G K
Sbjct: 232 EPLICEIKKATDK-PVAVYPNTGEK 255
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 149/316 (47%), Gaps = 19/316 (6%)
Query: 255 VQTIVYPNKGVKLL--DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRG 312
+ TI+ K KLL DGSF S++ + + D LWS+ L PE + H +
Sbjct: 1 MSTIIELLKEKKLLVIDGSFASELEKAGLNLCDS--LWSAKALYENPELVTKVHESYF-- 56
Query: 313 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSI 372
E+ A I G+ + G T I + +V+ +A + L P
Sbjct: 57 --ESGAGIAITGSY---QAHVQGLLKKGFTHEKAIELIKLSVKLAKKARENCLKK-HPER 110
Query: 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA 432
AA++GPYG L DGSEY G+Y S+ E L +H +EAL D+ A ETIP+
Sbjct: 111 KLAIAAAVGPYGAYLADGSEYVGNYGLSVKE--LEEFHEEKIEALASENPDFFAFETIPS 168
Query: 433 EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 492
E A V +L+ W +FSCKD+ H S G IS L +Q+ AIGVNC
Sbjct: 169 FDEVRAYVNILKRHENITGWFTFSCKDEKHISEGVEISEVAK--FLDKENQVHAIGVNCT 226
Query: 493 RPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552
+P ++ L+ IK++ VYPN G +D V W + + + Y +W E G
Sbjct: 227 KPEYIEPLICEIKKATDK-PVAVYPNTGEKYDPVTKTW--SGEPVDFIKYAKRWYESGAR 283
Query: 553 IIGGCCEVTSYEIQQM 568
+IGGCC + EI+ +
Sbjct: 284 LIGGCCRTSPDEIKAV 299
>gi|421148131|ref|ZP_15607797.1| homocysteine methyltransferase [Streptococcus agalactiae GB00112]
gi|401685107|gb|EJS81121.1| homocysteine methyltransferase [Streptococcus agalactiae GB00112]
Length = 314
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 156/272 (57%), Gaps = 17/272 (6%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K +L G+ +++ DV G LWS+ YL +P A H D+IRAGADI+ +S YQ
Sbjct: 12 KTLILHGALGTELESRGC-DVSGK-LWSAKYLIEDPAAIQTIHEDYIRAGADIVTTSTYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAAS 123
A + L ++G SE +A DL+ +VQL +A+++ ++ T + + + L++G
Sbjct: 70 ATLQGLAQVGVSESQAEDLIRLTVQLAKAAREQVWKSLTKEEKSERIYPLISG------D 123
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPY L DGSEY+G Y + + L +HR +E L+ GVD LALETIP +EA AL
Sbjct: 124 VGPYAAFLADGSEYTGLY--DIDKQGLKNFHRHRIELLLDEGVDILALETIPNAQEAEAL 181
Query: 184 VKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++LL E FP +A++SF+ +D S G ++ + + +P Q+ A+G+NC PS V+
Sbjct: 182 IELLAEDFPQVEAYMSFTSQDGKTISDGSAVAD-LAKAIDVSP-QVVALGINCSSPSLVA 239
Query: 243 TLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTS 274
++ I + + YPN G ++ DG+ S
Sbjct: 240 DFLQAIAE-QTNKPLVTYPNSG-EVYDGASQS 269
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 147/294 (50%), Gaps = 22/294 (7%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMT 342
DV G LWS+ YL +P A H D+IR + + Y L+ ++ V
Sbjct: 30 DVSGK-LWSAKYLIEDPAAIQTIHEDYIRAGADIVTT-STYQATLQGLAQVG---VSESQ 84
Query: 343 EADLIAWHRPNVEALVRAGVDYL--ALIKPSISSQT----AASIGPYGTVLRDGSEYSGH 396
DLI R V+ L +A + + +L K S + + +GPY L DGSEY+G
Sbjct: 85 AEDLI---RLTVQ-LAKAAREQVWKSLTKEEKSERIYPLISGDVGPYAAFLADGSEYTGL 140
Query: 397 YVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE-FPGQKAWLSF 455
Y + + L +HR +E L+ GVD LALETIP +EA AL++LL E FP +A++SF
Sbjct: 141 Y--DIDKQGLKNFHRHRIELLLDEGVDILALETIPNAQEAEALIELLAEDFPQVEAYMSF 198
Query: 456 SCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIV 515
+ +D S G ++ + + +P Q+ A+G+NC PS V+ ++ I + +
Sbjct: 199 TSQDGKTISDGSAVAD-LAKAIDVSP-QVVALGINCSSPSLVADFLQAIAE-QTNKPLVT 255
Query: 516 YPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
YPN G V+D W + D +++L W + G ++GGCC +I +
Sbjct: 256 YPNSGEVYDGASQSWQSSPDHSHTLLENTSDWQKLGAQVVGGCCRTRPADIADL 309
>gi|238794214|ref|ZP_04637829.1| Homocysteine S-methyltransferase [Yersinia intermedia ATCC 29909]
gi|238726504|gb|EEQ18043.1| Homocysteine S-methyltransferase [Yersinia intermedia ATCC 29909]
Length = 296
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 137/257 (53%), Gaps = 18/257 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D PLWS+ L +PE + H D+ AGA ++ YQA
Sbjct: 2 ILDGALATELEARGCDLSD--PLWSAKVLIEDPELIYQVHLDYFNAGAQCAITASYQATP 59
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSA-KDKENQTPDINLNKTFNLLTGHIETAASIGPY 127
+ G +Q++L+L+ KSVQL A KD NQ P + A S+GPY
Sbjct: 60 QGFLQRGLDQQQSLELITKSVQLAQQARKDFLNQHPQAE----------PLLIAGSVGPY 109
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G+Y + + ++IA+HRP + AL AGVD LA ET+P+ E AL+ LL
Sbjct: 110 GAYLADGSEYRGNY--RLPQDEMIAFHRPRIAALAEAGVDLLACETLPSFHELQALLTLL 167
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
+EFP W +F+ +D+ H S G + + LL Q+ AIG+NC+ +V+ ++
Sbjct: 168 QEFPTLGGWFAFTLRDNQHLSDGTPLKDVLA--LLRGNQQVLAIGINCIALENVTPALQQ 225
Query: 248 IKQSHPTVQTIVYPNKG 264
+ +VYPN G
Sbjct: 226 FT-ALADKPLLVYPNSG 241
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 152/305 (49%), Gaps = 23/305 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG----P 322
+LDG+ +++ D PLWS+ L +PE + H D+ + A + P
Sbjct: 2 ILDGALATELEARGCDLSD--PLWSAKVLIEDPELIYQVHLDYFNAGAQCAITASYQATP 59
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
G + R +D +LI +V+ +A D+L + A S+GP
Sbjct: 60 QGFLQRG--------LDQQQSLELIT---KSVQLAQQARKDFLNQHPQAEPLLIAGSVGP 108
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY G+Y + + ++IA+HRP + AL AGVD LA ET+P+ E AL+ L
Sbjct: 109 YGAYLADGSEYRGNY--RLPQDEMIAFHRPRIAALAEAGVDLLACETLPSFHELQALLTL 166
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
L+EFP W +F+ +D+ H S G + + LL Q+ AIG+NC+ +V+ ++
Sbjct: 167 LQEFPTLGGWFAFTLRDNQHLSDGTPLKDVLA--LLRGNQQVLAIGINCIALENVTPALQ 224
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYS-ILHYVPQWLEEGVNIIGGCCEVT 561
+ +VYPN G +D+V W E++ ++ V +W G +IGGCC T
Sbjct: 225 QFT-ALADKPLLVYPNSGEHYDAVSKTWHACGGEHNHLIDLVGEWQRLGARLIGGCCRTT 283
Query: 562 SYEIQ 566
+I+
Sbjct: 284 PKDIR 288
>gi|424791226|ref|ZP_18217701.1| homocysteine S-methyltransferase [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422797664|gb|EKU25884.1| homocysteine S-methyltransferase [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 317
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 156/321 (48%), Gaps = 31/321 (9%)
Query: 257 TIVYPNKGVKLLDGSFTSQVSRHTIKDVD-GHPLWSSVYLTTEPEACVETHRDFIRGHIE 315
T + ++G +LDG+ +++ + D G LWS+ L +P+ + H D+ +
Sbjct: 7 TALLADQGCIVLDGALATELE---ARGCDLGDALWSAKVLLEQPQLIRQVHLDYFEAGAQ 63
Query: 316 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ 375
A + T L ++ +D LIA + + ++A YLA + +
Sbjct: 64 CAITASYQATPL----GFAARGIDPAQSRQLIAR---SAQLALQARDAYLATHADAGALL 116
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
A S+GPYG L DGSEY G Y ++ A ++ +HRP + ALV AGVD LA ET P+ E
Sbjct: 117 VAGSVGPYGAYLSDGSEYRGDY--ALPHAAMLDFHRPRIAALVEAGVDLLACETQPSAAE 174
Query: 436 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP- 494
+AL+ LL+EFP AW SF+ +D H S G + V L Q+ A+GVNC+ P
Sbjct: 175 IVALLALLQEFPQSTAWFSFTLRDAMHLSDGTPLREVVAR--LDGHPQVVALGVNCIAPE 232
Query: 495 ------SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDT-EDEYSILHYVPQWL 547
H++TL R + +VYPN G +D+ W D ++ V W
Sbjct: 233 LGSAALQHLATLTR--------LPLVVYPNSGEHYDAAVKHWDGAGADACGLVDRVDAWR 284
Query: 548 EEGVNIIGGCCEVTSYEIQQM 568
G +IGGCC T +I Q+
Sbjct: 285 AAGARLIGGCCRTTPRDIAQL 305
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 132/264 (50%), Gaps = 32/264 (12%)
Query: 9 LLDGSFTSQVSRHTIKDVD-GHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQAN 67
+LDG+ +++ + D G LWS+ L +P+ + H D+ AGA ++ YQA
Sbjct: 17 VLDGALATELE---ARGCDLGDALWSAKVLLEQPQLIRQVHLDYFEAGAQCAITASYQAT 73
Query: 68 VDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPY 127
G ++ L+ +S QL A+D T + G + A S+GPY
Sbjct: 74 PLGFAARGIDPAQSRQLIARSAQLALQARDAYLAT---------HADAGALLVAGSVGPY 124
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y ++ A ++ +HRP + ALV AGVD LA ET P+ E +AL+ LL
Sbjct: 125 GAYLSDGSEYRGDY--ALPHAAMLDFHRPRIAALVEAGVDLLACETQPSAAEIVALLALL 182
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP-------SH 240
+EFP AW SF+ +D H S G + V L Q+ A+GVNC+ P H
Sbjct: 183 QEFPQSTAWFSFTLRDAMHLSDGTPLREVVAR--LDGHPQVVALGVNCIAPELGSAALQH 240
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKG 264
++TL R + +VYPN G
Sbjct: 241 LATLTR--------LPLVVYPNSG 256
>gi|421845543|ref|ZP_16278696.1| homocysteine methyltransferase [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|411773078|gb|EKS56649.1| homocysteine methyltransferase [Citrobacter freundii ATCC 8090 =
MTCC 1658]
Length = 311
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 156/327 (47%), Gaps = 24/327 (7%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P + + + LLDG+ +++ D LWS+ L PE E H
Sbjct: 1 MSQNNPL--SAILDKQDFLLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHL 56
Query: 308 DFIRGHIETAASIG----PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 363
D+ R + A + P G RD + EA A +VE +A
Sbjct: 57 DYYRAGAQCAITASYQATPAGFAARD-----------LDEAQSKALIGKSVELARKAREA 105
Query: 364 YLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 423
YLA + + A S+GPYG L DGSEY G Y S E A+HRP VEAL+ AG D
Sbjct: 106 YLAENPQAGTLLVAGSVGPYGAYLADGSEYRGDYQRSAEE--FQAFHRPRVEALLDAGAD 163
Query: 424 YLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQ 483
LA ET+P E AL +LL +P +AW SF+ +D H S G + V + L A Q
Sbjct: 164 LLACETLPNFAEISALAELLTAYPRARAWFSFTLRDSEHLSDGTPLRD-VVALLAAGYPQ 222
Query: 484 IQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYS-ILHY 542
+ A+G+NC+ + + ++ + + +VYPN G +D+V W + + + Y
Sbjct: 223 VVALGINCIALENTTAALQHL-HGLTALPLVVYPNSGEQYDAVSKTWHHHGEHCAHLADY 281
Query: 543 VPQWLEEGVNIIGGCCEVTSYEIQQMR 569
+PQW G +IGGCC T +I ++
Sbjct: 282 LPQWQAAGARLIGGCCRTTPKDIAALK 308
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 126/256 (49%), Gaps = 15/256 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L PE E H D+ RAGA ++ YQA
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARDLDEAQSKALIGKSVELARKAREA---------YLAENPQAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y S E A+HRP VEAL+ AG D LA ET+P E AL +LL
Sbjct: 127 AYLADGSEYRGDYQRSAEE--FQAFHRPRVEALLDAGADLLACETLPNFAEISALAELLT 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+P +AW SF+ +D H S G + V + L A Q+ A+G+NC+ + + ++ +
Sbjct: 185 AYPRARAWFSFTLRDSEHLSDGTPLRD-VVALLAAGYPQVVALGINCIALENTTAALQHL 243
Query: 249 KQSHPTVQTIVYPNKG 264
+ +VYPN G
Sbjct: 244 -HGLTALPLVVYPNSG 258
>gi|421531953|ref|ZP_15978328.1| homocysteine methyltransferase [Streptococcus agalactiae
STIR-CD-17]
gi|403642853|gb|EJZ03659.1| homocysteine methyltransferase [Streptococcus agalactiae
STIR-CD-17]
Length = 314
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 95/253 (37%), Positives = 148/253 (58%), Gaps = 16/253 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL +P A H D+IRAGADI+ +S YQA + L ++G SE +A DL
Sbjct: 30 DVSGK-LWSAKYLIEDPAAIQTIHEDYIRAGADIVTTSTYQATLQELAQVGVSESQAEDL 88
Query: 85 LHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV 142
+ +VQL +A+++ ++ T + + + L++G +GPY L DGSEY+G Y
Sbjct: 89 IRLTVQLAKAAREQVWKSLTKEGKSERIYPLISG------DVGPYAAFLADGSEYTGLY- 141
Query: 143 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE-FPGQKAWLSFSC 201
+ + L +HR +E L+ GVD LALETIP +EA AL++LL E FP +A++SF+
Sbjct: 142 -DIDKGGLKNFHRHRIELLLDEGVDLLALETIPNAQEAEALIELLAEDFPQVEAYMSFTS 200
Query: 202 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 261
+D S G ++ + + +P Q+ A+G+NC PS V+ ++ I + + YP
Sbjct: 201 QDGKTISDGSAVAD-LAKAIDVSP-QVVALGINCSSPSLVADFLQAIAE-QTDKPLVTYP 257
Query: 262 NKGVKLLDGSFTS 274
N G ++ DG+ S
Sbjct: 258 NSG-EVYDGASQS 269
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 148/294 (50%), Gaps = 22/294 (7%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMT 342
DV G LWS+ YL +P A H D+IR + + Y L++ ++ V
Sbjct: 30 DVSGK-LWSAKYLIEDPAAIQTIHEDYIRAGADIVTT-STYQATLQELAQVG---VSESQ 84
Query: 343 EADLIAWHRPNVEALVRAGVDYL--ALIKPSISSQT----AASIGPYGTVLRDGSEYSGH 396
DLI R V+ L +A + + +L K S + + +GPY L DGSEY+G
Sbjct: 85 AEDLI---RLTVQ-LAKAAREQVWKSLTKEGKSERIYPLISGDVGPYAAFLADGSEYTGL 140
Query: 397 YVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE-FPGQKAWLSF 455
Y + + L +HR +E L+ GVD LALETIP +EA AL++LL E FP +A++SF
Sbjct: 141 Y--DIDKGGLKNFHRHRIELLLDEGVDLLALETIPNAQEAEALIELLAEDFPQVEAYMSF 198
Query: 456 SCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIV 515
+ +D S G ++ + + +P Q+ A+G+NC PS V+ ++ I + +
Sbjct: 199 TSQDGKTISDGSAVAD-LAKAIDVSP-QVVALGINCSSPSLVADFLQAIAE-QTDKPLVT 255
Query: 516 YPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
YPN G V+D W + D +++L W + G ++GGCC +I +
Sbjct: 256 YPNSGEVYDGASQSWQSSPDHSHTLLENTSDWQKLGAQVVGGCCRTRPADIADL 309
>gi|77409797|ref|ZP_00786446.1| homocysteine S-methyltransferase [Streptococcus agalactiae COH1]
gi|77171596|gb|EAO74816.1| homocysteine S-methyltransferase [Streptococcus agalactiae COH1]
Length = 341
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 156/272 (57%), Gaps = 17/272 (6%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K +L G+ +++ DV G LWS+ YL +P A H D+IRAGADI+ +S YQ
Sbjct: 39 KTLILHGALGTELESRGC-DVSGK-LWSAKYLIEDPAAIQTIHEDYIRAGADIVTTSTYQ 96
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAAS 123
A + L ++G SE +A DL+ +VQL +A+++ ++ T + + + L++G
Sbjct: 97 ATLQGLAQVGVSESQAEDLIRLTVQLAKAAREQVWKSLTKEEKSERIYPLISG------D 150
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPY L DGSEY+G Y + + L +HR +E L+ GVD LALETIP +EA AL
Sbjct: 151 VGPYAAFLADGSEYTGLY--DIDKQGLKNFHRHRIELLLDEGVDILALETIPNAQEAEAL 208
Query: 184 VKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++LL E FP +A++SF+ +D S G ++ + + +P Q+ A+G+NC PS V+
Sbjct: 209 IELLAEDFPQVEAYMSFTSQDGKTISDGSAVAD-LAKAIDVSP-QVVALGINCSSPSLVA 266
Query: 243 TLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTS 274
++ I + + YPN G ++ DG+ S
Sbjct: 267 DFLQAIAE-QTNKPLVTYPNSG-EVYDGASQS 296
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 147/294 (50%), Gaps = 22/294 (7%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMT 342
DV G LWS+ YL +P A H D+IR + + Y L+ ++ V
Sbjct: 57 DVSGK-LWSAKYLIEDPAAIQTIHEDYIRAGADIVTT-STYQATLQGLAQVG---VSESQ 111
Query: 343 EADLIAWHRPNVEALVRAGVDYL--ALIKPSISSQT----AASIGPYGTVLRDGSEYSGH 396
DLI R V+ L +A + + +L K S + + +GPY L DGSEY+G
Sbjct: 112 AEDLI---RLTVQ-LAKAAREQVWKSLTKEEKSERIYPLISGDVGPYAAFLADGSEYTGL 167
Query: 397 YVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE-FPGQKAWLSF 455
Y + + L +HR +E L+ GVD LALETIP +EA AL++LL E FP +A++SF
Sbjct: 168 Y--DIDKQGLKNFHRHRIELLLDEGVDILALETIPNAQEAEALIELLAEDFPQVEAYMSF 225
Query: 456 SCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIV 515
+ +D S G ++ + + +P Q+ A+G+NC PS V+ ++ I + +
Sbjct: 226 TSQDGKTISDGSAVAD-LAKAIDVSP-QVVALGINCSSPSLVADFLQAIAE-QTNKPLVT 282
Query: 516 YPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
YPN G V+D W + D +++L W + G ++GGCC +I +
Sbjct: 283 YPNSGEVYDGASQSWQSSPDHSHTLLENTSDWQKLGAQVVGGCCRTRPADIADL 336
>gi|365852068|ref|ZP_09392476.1| putative homocysteine S-methyltransferase [Lactobacillus
parafarraginis F0439]
gi|363715497|gb|EHL98934.1| putative homocysteine S-methyltransferase [Lactobacillus
parafarraginis F0439]
Length = 325
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 151/322 (46%), Gaps = 23/322 (7%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
K +LDG+ +++ + + + LWS+ L + PEA H+ + + A +
Sbjct: 17 KAALVLDGAMATELEKRGVHTDNA--LWSATALISNPEAVKAVHKSYFEAGADIAITDTY 74
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT------ 376
V +G E +G Y + +E + R L RA D P+
Sbjct: 75 QANV--NGFEQAG-YSEGQSEKLITEAVR-----LARAARDEFYFELPADQRANRAPYPI 126
Query: 377 -AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
A S+GPYG L DGSEY+G Y+ +T + +H P +E + +AGVD A ET P E
Sbjct: 127 VAGSVGPYGAYLADGSEYTGDYL--LTTTEFQEFHAPRMELMAKAGVDMFAFETQPNFDE 184
Query: 436 ALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
A AL +++ FP AWLSFS D H G ++ AV + NP QI AIGVNC
Sbjct: 185 AKALASMMKTRFPNMFAWLSFSVSDPEHLCDGTPLAEAV-AYFNGNP-QISAIGVNCTSM 242
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554
+++ ++ I + IVYPN G ++D W + P+WL G II
Sbjct: 243 NNIEATIKTIA-PNTDKPIIVYPNNGDIYDPKTKTWEPNPQAATFADLTPKWLAAGAKII 301
Query: 555 GGCCEVTSYEIQQMRIMIDEFN 576
GGCC T +I+Q+ ++ N
Sbjct: 302 GGCCRTTPGDIEQVADAVNAKN 323
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 139/267 (52%), Gaps = 31/267 (11%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + + + LWS+ L + PEA H+ + AGADI + YQANV
Sbjct: 21 VLDGAMATELEKRGVHTDNA--LWSATALISNPEAVKAVHKSYFEAGADIAITDTYQANV 78
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKD----------KENQTPDINLNKTFNLLTGHI 118
+ + GYSE ++ L+ ++V+L +A+D + N+ P +
Sbjct: 79 NGFEQAGYSEGQSEKLITEAVRLARAARDEFYFELPADQRANRAP-------------YP 125
Query: 119 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 178
A S+GPYG L DGSEY+G Y+ +T + +H P +E + +AGVD A ET P
Sbjct: 126 IVAGSVGPYGAYLADGSEYTGDYL--LTTTEFQEFHAPRMELMAKAGVDMFAFETQPNFD 183
Query: 179 EALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 237
EA AL +++ FP AWLSFS D H G ++ AV + NP QI AIGVNC
Sbjct: 184 EAKALASMMKTRFPNMFAWLSFSVSDPEHLCDGTPLAEAV-AYFNGNP-QISAIGVNCTS 241
Query: 238 PSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+++ ++ I + IVYPN G
Sbjct: 242 MNNIEATIKTIA-PNTDKPIIVYPNNG 267
>gi|77411163|ref|ZP_00787515.1| homocysteine S-methyltransferase [Streptococcus agalactiae CJB111]
gi|77162781|gb|EAO73740.1| homocysteine S-methyltransferase [Streptococcus agalactiae CJB111]
Length = 348
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 155/272 (56%), Gaps = 17/272 (6%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K +L G+ +++ DV G LWS+ YL +P A H D+IRAGADI+ +S YQ
Sbjct: 46 KTLILHGALGTELESRGC-DVSGK-LWSAKYLIEDPAAIQTIHEDYIRAGADIVTTSTYQ 103
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAAS 123
A + L ++G SE +A DL+ +VQL +A+++ ++ T + + + L++G
Sbjct: 104 ATLQGLAQVGVSESQAEDLIRLTVQLAKAAREQVWKSLTKEEKSERIYPLISG------D 157
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPY L DGSEY+G Y + + L +HR +E L+ GVD LALETIP +EA AL
Sbjct: 158 VGPYAAFLADGSEYTGLY--DIDKQGLKNFHRHRIELLLDEGVDILALETIPNAQEAEAL 215
Query: 184 VKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++LL E FP +A++SF+ +D S G ++ S ++ Q+ A+G+NC PS V+
Sbjct: 216 IELLAEDFPQVEAYMSFTSQDGKTISDGSAVADLAKSIDVS--PQVVALGINCSSPSLVA 273
Query: 243 TLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTS 274
++ I + + YPN G ++ DG+ S
Sbjct: 274 DFLQAIAE-QTNKPLVTYPNSG-EVYDGASQS 303
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 146/294 (49%), Gaps = 22/294 (7%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMT 342
DV G LWS+ YL +P A H D+IR + + Y L+ ++ V
Sbjct: 64 DVSGK-LWSAKYLIEDPAAIQTIHEDYIRAGADIVTT-STYQATLQGLAQVG---VSESQ 118
Query: 343 EADLIAWHRPNVEALVRAGVDYL--ALIKPSISSQT----AASIGPYGTVLRDGSEYSGH 396
DLI R V+ L +A + + +L K S + + +GPY L DGSEY+G
Sbjct: 119 AEDLI---RLTVQ-LAKAAREQVWKSLTKEEKSERIYPLISGDVGPYAAFLADGSEYTGL 174
Query: 397 YVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE-FPGQKAWLSF 455
Y + + L +HR +E L+ GVD LALETIP +EA AL++LL E FP +A++SF
Sbjct: 175 Y--DIDKQGLKNFHRHRIELLLDEGVDILALETIPNAQEAEALIELLAEDFPQVEAYMSF 232
Query: 456 SCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIV 515
+ +D S G ++ S ++ Q+ A+G+NC PS V+ ++ I + +
Sbjct: 233 TSQDGKTISDGSAVADLAKSIDVS--PQVVALGINCSSPSLVADFLQAIAE-QTNKPLVT 289
Query: 516 YPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
YPN G V+D W + D +++L W + G ++GGCC +I +
Sbjct: 290 YPNSGEVYDGASQSWQSSPDHSHTLLENTSDWQKLGAQVVGGCCRTRPADIADL 343
>gi|76799284|ref|ZP_00781452.1| Homocysteine S-methyltransferase (S-methylmethionine:homocysteine
methyltransferase) [Streptococcus agalactiae 18RS21]
gi|76585361|gb|EAO61951.1| Homocysteine S-methyltransferase (S-methylmethionine:homocysteine
methyltransferase) [Streptococcus agalactiae 18RS21]
Length = 348
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 156/272 (57%), Gaps = 17/272 (6%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K +L G+ +++ DV G LWS+ YL +P A H D+IRAGADI+ +S YQ
Sbjct: 46 KTLILHGALGTELESRGC-DVSGK-LWSAKYLIEDPAAIQTIHEDYIRAGADIVTTSTYQ 103
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAAS 123
A + L ++G SE +A DL+ +VQL +A+++ ++ T + + + L++G
Sbjct: 104 ATLQGLAQVGVSESQAEDLIRLTVQLAKAAREQVWKSLTKEEKSERIYPLISG------D 157
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPY L DGSEY+G Y + + L +HR +E L+ GVD LALETIP +EA AL
Sbjct: 158 VGPYAAFLADGSEYTGLY--DIDKQGLKNFHRHRIELLLDEGVDILALETIPNAQEAEAL 215
Query: 184 VKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++LL E FP +A++SF+ +D S G ++ + + +P Q+ A+G+NC PS V+
Sbjct: 216 IELLAEDFPQVEAYMSFTSQDGKTISDGSAVAD-LAKAIDVSP-QVVALGINCSSPSLVA 273
Query: 243 TLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTS 274
++ I + + YPN G ++ DG+ S
Sbjct: 274 DFLQAIAE-QTNKPLVTYPNSG-EVYDGASQS 303
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 147/294 (50%), Gaps = 22/294 (7%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMT 342
DV G LWS+ YL +P A H D+IR + + Y L+ ++ V
Sbjct: 64 DVSGK-LWSAKYLIEDPAAIQTIHEDYIRAGADIVTT-STYQATLQGLAQVG---VSESQ 118
Query: 343 EADLIAWHRPNVEALVRAGVDYL--ALIKPSISSQT----AASIGPYGTVLRDGSEYSGH 396
DLI R V+ L +A + + +L K S + + +GPY L DGSEY+G
Sbjct: 119 AEDLI---RLTVQ-LAKAAREQVWKSLTKEEKSERIYPLISGDVGPYAAFLADGSEYTGL 174
Query: 397 YVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE-FPGQKAWLSF 455
Y + + L +HR +E L+ GVD LALETIP +EA AL++LL E FP +A++SF
Sbjct: 175 Y--DIDKQGLKNFHRHRIELLLDEGVDILALETIPNAQEAEALIELLAEDFPQVEAYMSF 232
Query: 456 SCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIV 515
+ +D S G ++ + + +P Q+ A+G+NC PS V+ ++ I + +
Sbjct: 233 TSQDGKTISDGSAVAD-LAKAIDVSP-QVVALGINCSSPSLVADFLQAIAE-QTNKPLVT 289
Query: 516 YPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
YPN G V+D W + D +++L W + G ++GGCC +I +
Sbjct: 290 YPNSGEVYDGASQSWQSSPDHSHTLLENTSDWQKLGAQVVGGCCRTRPADIADL 343
>gi|377830886|ref|ZP_09813877.1| homocysteine methyltransferase [Lactobacillus mucosae LM1]
gi|377555334|gb|EHT17022.1| homocysteine methyltransferase [Lactobacillus mucosae LM1]
Length = 305
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 147/258 (56%), Gaps = 21/258 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DGS ++ + R D D LW++ L +PE + H+++ AGA + + YQAN+
Sbjct: 12 VIDGSMSTSLERLGC-DTDNE-LWTAAALINQPELVYQVHKEYFEAGARLAITDTYQANL 69
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG-HIETAASIGPY 127
L K G +E++A ++ K+V+L A+D + + TG H A S+GPY
Sbjct: 70 PALKKAGLTEKQARQVIEKAVELAKQARDD------------YEIETGAHGYVAGSLGPY 117
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L +GSEY G Y +T A+ ++RP +EA+V AGVD LALET P E A++ LL
Sbjct: 118 GAYLANGSEYRGDY--ELTSAEYQEFYRPRLEAIVNAGVDCLALETQPKLSEVKAVLDLL 175
Query: 188 R-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+ E+P QK ++SF+ ++ S G ++ A + +A DQ+ +GVNC+ P V+ ++
Sbjct: 176 KNEYPDQKVYVSFTLQNAETISEGTKLADAAKA--VAQYDQVIGVGVNCIPPRLVTPAIK 233
Query: 247 CIKQSHPTVQTIVYPNKG 264
+K++ + IVYPN G
Sbjct: 234 KLKEAT-ALPIIVYPNSG 250
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 153/313 (48%), Gaps = 25/313 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
++DGS ++ + R D D LW++ L +PE + H+++ G
Sbjct: 12 VIDGSMSTSLERLGC-DTDNE-LWTAAALINQPELVYQVHKEYFEA-----------GAR 58
Query: 327 LRDGSEYSGHY----VDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
L Y + +TE VE +A DY I+ A S+GP
Sbjct: 59 LAITDTYQANLPALKKAGLTEKQARQVIEKAVELAKQARDDYE--IETGAHGYVAGSLGP 116
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L +GSEY G Y +T A+ ++RP +EA+V AGVD LALET P E A++ L
Sbjct: 117 YGAYLANGSEYRGDY--ELTSAEYQEFYRPRLEAIVNAGVDCLALETQPKLSEVKAVLDL 174
Query: 443 LR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
L+ E+P QK ++SF+ ++ S G ++ A + +A DQ+ +GVNC+ P V+ +
Sbjct: 175 LKNEYPDQKVYVSFTLQNAETISEGTKLADAAKA--VAQYDQVIGVGVNCIPPRLVTPAI 232
Query: 502 RCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVT 561
+ +K++ + IVYPN G +D+ W E +WL G + IGGCC T
Sbjct: 233 KKLKEAT-ALPIIVYPNSGASYDATTKTWSAAPAEDDFGKLTKEWLLAGASAIGGCCTTT 291
Query: 562 SYEIQQMRIMIDE 574
+I ++ ++++
Sbjct: 292 PADIAKIAAVLND 304
>gi|146310490|ref|YP_001175564.1| homocysteine methyltransferase [Enterobacter sp. 638]
gi|145317366|gb|ABP59513.1| homocysteine S-methyltransferase [Enterobacter sp. 638]
Length = 311
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 148/303 (48%), Gaps = 15/303 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D LWS+ L P+ + H D+ R + A + T
Sbjct: 18 VLDGAMATELEARGCNLADS--LWSAKVLVENPDLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+G + EA A +VE +A YLA + + A S+GPYG
Sbjct: 76 -------AGFAARGLDEAQSRALIGKSVELARKAREAYLAENAHAGTLLVAGSVGPYGAY 128
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y+ S E +HRP VEAL+ AG D LA ET+P+ E AL LL E+
Sbjct: 129 LADGSEYRGDYLRSAQE--FTEFHRPRVEALLDAGADLLACETLPSFAEIKALAALLSEY 186
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P +AW SF+ ++ H S G + V + LA+ QI A+G+NC+ + + + +
Sbjct: 187 PRARAWFSFTLRESEHLSDGTPLREVVAA--LADYPQIVALGINCIALENTTAALEHL-H 243
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILH-YVPQWLEEGVNIIGGCCEVTSYEI 565
S + +VYPN G +D+V W + L Y+P WL G +IGGCC T +I
Sbjct: 244 SLTALPLVVYPNSGEHYDAVTKTWHHHGEACETLSGYLPHWLAAGAKLIGGCCRTTPKDI 303
Query: 566 QQM 568
++
Sbjct: 304 AEL 306
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 130/256 (50%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L P+ + H D+ RAGA + ++ YQA
Sbjct: 18 VLDGAMATELEARGCNLADS--LWSAKVLVENPDLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSRALIGKSVELARKAREAYLAE---------NAHAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y+ S E +HRP VEAL+ AG D LA ET+P+ E AL LL
Sbjct: 127 AYLADGSEYRGDYLRSAQE--FTEFHRPRVEALLDAGADLLACETLPSFAEIKALAALLS 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E+P +AW SF+ ++ H S G + V + LA+ QI A+G+NC+ + + + +
Sbjct: 185 EYPRARAWFSFTLRESEHLSDGTPLREVVAA--LADYPQIVALGINCIALENTTAALEHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S + +VYPN G
Sbjct: 243 -HSLTALPLVVYPNSG 257
>gi|365969181|ref|YP_004950742.1| Homocysteine S-methyltransferase [Enterobacter cloacae EcWSU1]
gi|365748094|gb|AEW72321.1| Homocysteine S-methyltransferase [Enterobacter cloacae EcWSU1]
Length = 310
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 159/323 (49%), Gaps = 17/323 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + + +LDG+ +++ D LWS+ L P+ + H
Sbjct: 1 MSQNNPL--TAILEKQPFVVLDGAMATELEARGCNLADS--LWSAKVLVENPDLIRDVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + EA A +VE +A YLA
Sbjct: 57 DYYRAGAQVAITASYQATP-------AGFAARGLDEAQSRALIGKSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G YV S EA +HRP VEAL+ AG D LA
Sbjct: 110 NPHAGTLLVAGSVGPYGAYLADGSEYRGDYVRS-AEA-FTDFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P+ E AL LL E+P + W SF+ +D H S G + +++ L QI A+
Sbjct: 168 ETLPSFAEIKALAALLAEYPRARGWFSFTLRDSEHLSDGTPLREVISA--LERYPQIVAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQW 546
G+NC+ + + ++ + S + +VYPN G +D+V W E ++ Y+PQW
Sbjct: 226 GINCIALENTTAALKHL-HSLTALPLVVYPNSGEHYDAVTKTWHHHGEACETLAGYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQMR 569
L G +IGGCC T +I +++
Sbjct: 285 LAAGAKLIGGCCRTTPTDIAELK 307
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 130/256 (50%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L P+ + H D+ RAGA + ++ YQA
Sbjct: 18 VLDGAMATELEARGCNLADS--LWSAKVLVENPDLIRDVHLDYYRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSRALIGKSVELARKAREAYLAE---------NPHAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV S EA +HRP VEAL+ AG D LA ET+P+ E AL LL
Sbjct: 127 AYLADGSEYRGDYVRS-AEA-FTDFHRPRVEALLDAGADLLACETLPSFAEIKALAALLA 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E+P + W SF+ +D H S G + +++ L QI A+G+NC+ + + ++ +
Sbjct: 185 EYPRARGWFSFTLRDSEHLSDGTPLREVISA--LERYPQIVALGINCIALENTTAALKHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S + +VYPN G
Sbjct: 243 -HSLTALPLVVYPNSG 257
>gi|429107580|ref|ZP_19169449.1| Homocysteine S-methyltransferase [Cronobacter malonaticus 681]
gi|426294303|emb|CCJ95562.1| Homocysteine S-methyltransferase [Cronobacter malonaticus 681]
Length = 310
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 147/304 (48%), Gaps = 15/304 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D LWS+ L +PE H D+ R + A + T
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+G + EA A +VE +A DY + A S+GPYG
Sbjct: 76 -------AGFAARGLDEAQSRALIARSVELARQARDDYYHEQPDAGPLLVAGSVGPYGAY 128
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y +++ A+ +HRP VEAL+ AGVD LA ET+P+ EA AL LL +
Sbjct: 129 LADGSEYRGDY--ALSAAEFADFHRPRVEALLEAGVDLLACETLPSLPEAQALAALLESY 186
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P +AW +F+ +D H S G + + LA QI A+G+NCV + + +
Sbjct: 187 PQARAWFTFTLRDSDHISDGTPLGDVAAA--LAPYPQIAALGINCVALEKTTAALGRLHD 244
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
+ + +VYPN G +D+V W D ++ HY+ +W G +IGGCC T +I
Sbjct: 245 AT-RLPLVVYPNSGEQYDAVSKTWRHDGHACQTLAHYLNEWRAAGAALIGGCCRTTPADI 303
Query: 566 QQMR 569
+R
Sbjct: 304 AALR 307
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 140/280 (50%), Gaps = 26/280 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L +PE H D+ RAGA ++ YQA
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKE-NQTPDINLNKTFNLLTGHIETAASIGPY 127
G E ++ L+ +SV+L A+D ++ PD G + A S+GPY
Sbjct: 76 AGFAARGLDEAQSRALIARSVELARQARDDYYHEQPD----------AGPLLVAGSVGPY 125
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y +++ A+ +HRP VEAL+ AGVD LA ET+P+ EA AL LL
Sbjct: 126 GAYLADGSEYRGDY--ALSAAEFADFHRPRVEALLEAGVDLLACETLPSLPEAQALAALL 183
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
+P +AW +F+ +D H S G + + LA QI A+G+NCV + +
Sbjct: 184 ESYPQARAWFTFTLRDSDHISDGTPLGDVAAA--LAPYPQIAALGINCVALEKTTAALGR 241
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGH 287
+ + + +VYPN G + S+ RH DGH
Sbjct: 242 LHDAT-RLPLVVYPNSGEQY---DAVSKTWRH-----DGH 272
>gi|452004476|gb|EMD96932.1| hypothetical protein COCHEDRAFT_1018643 [Cochliobolus
heterostrophus C5]
Length = 321
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 148/262 (56%), Gaps = 23/262 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ + + T+ LWS+ L P +TH D+ RAGA++ ++ YQA++
Sbjct: 22 ILDGALATYL--ETLGANISGALWSAEILIANPSLIRKTHVDYYRAGANVAITASYQASL 79
Query: 69 DNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINL-NKTFNLLTGHIETAASIGP 126
D L K LG SEQ+A ++ KSV+L A+ + + ++ +K F A S+GP
Sbjct: 80 DGLVKHLGLSEQDAKSVVKKSVELAQEARSQYITEANADVQDKLF--------VAGSVGP 131
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G YV + + + +HR ++ALV AGVD LA ETIP++ E AL+ L
Sbjct: 132 YGAFLADGSEYRGDYV--VPKEKMKDFHRGRIQALVEAGVDILACETIPSKAETEALIDL 189
Query: 187 L-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
L EFP +AW SF+ +D +H S G +S V L +Q+ ++G NCV P V+ +
Sbjct: 190 LTSEFPSSEAWFSFTLRDGSHISDGTPLSEIV--ALFKGVEQVVSLGFNCV-PDDVALV- 245
Query: 246 RCIKQSHPTVQ---TIVYPNKG 264
+++ P V+ +VYPN G
Sbjct: 246 -ALQELKPLVKEGTMVVYPNSG 266
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 154/310 (49%), Gaps = 22/310 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ + + T+ LWS+ L P +TH D+ R A + Y
Sbjct: 22 ILDGALATYL--ETLGANISGALWSAEILIANPSLIRKTHVDYYRAGANVAIT-ASYQAS 78
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--TAASIGPYG 384
L ++ G ++E D + + +VE A Y+ + + A S+GPYG
Sbjct: 79 LDGLVKHLG-----LSEQDAKSVVKKSVELAQEARSQYITEANADVQDKLFVAGSVGPYG 133
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL- 443
L DGSEY G YV + + + +HR ++ALV AGVD LA ETIP++ E AL+ LL
Sbjct: 134 AFLADGSEYRGDYV--VPKEKMKDFHRGRIQALVEAGVDILACETIPSKAETEALIDLLT 191
Query: 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
EFP +AW SF+ +D +H S G +S V L +Q+ ++G NCV P V+ +
Sbjct: 192 SEFPSSEAWFSFTLRDGSHISDGTPLSEIV--ALFKGVEQVVSLGFNCV-PDDVALV--A 246
Query: 504 IKQSHPTVQ---TIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQWLEEGVNIIGGCCE 559
+++ P V+ +VYPN G W++ +W E S L +W + G +IGGCC
Sbjct: 247 LQELKPLVKEGTMVVYPNSGEQWNAKAREWEGKRTEGSTLAKKTEEWRDAGAGLIGGCCR 306
Query: 560 VTSYEIQQMR 569
T +I M+
Sbjct: 307 TTPEDIAVMK 316
>gi|451855432|gb|EMD68724.1| hypothetical protein COCSADRAFT_276080 [Cochliobolus sativus
ND90Pr]
Length = 321
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 149/263 (56%), Gaps = 25/263 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ + + T+ LWS+ L P +TH D+ RAGA++ ++ YQA++
Sbjct: 22 ILDGALATYL--ETLGANISGALWSAEILIANPSLIKKTHLDYYRAGANVAITASYQASL 79
Query: 69 DNLTK-LGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIG 125
D L K LG SEQ+A +++ KSV+L A+ + + D+ +K F A S+G
Sbjct: 80 DGLVKHLGLSEQDAKNVVKKSVELAREARSQYITESSADVG-DKLF--------VAGSVG 130
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY G YV + + + +HR ++ALV AGVD LA ETIP++ E AL+
Sbjct: 131 PYGAFLADGSEYRGDYV--VPKEKMKDFHRGRIQALVEAGVDILACETIPSKAETEALID 188
Query: 186 LL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
LL EFP +AW SF+ +D H S G +S + L + +Q+ ++G NCV P V+ +
Sbjct: 189 LLTSEFPSSEAWFSFTLRDGNHISDGTPLSE--MAALFKSVEQVVSLGFNCV-PDDVALV 245
Query: 245 VRCIKQSHPTVQ---TIVYPNKG 264
+++ P V+ +VYPN G
Sbjct: 246 --ALQELKPLVKEGTMVVYPNSG 266
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 153/310 (49%), Gaps = 22/310 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ + + T+ LWS+ L P +TH D+ R A + Y
Sbjct: 22 ILDGALATYL--ETLGANISGALWSAEILIANPSLIKKTHLDYYRAGANVAIT-ASYQAS 78
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--TAASIGPYG 384
L ++ G ++E D + +VE A Y+ + + A S+GPYG
Sbjct: 79 LDGLVKHLG-----LSEQDAKNVVKKSVELAREARSQYITESSADVGDKLFVAGSVGPYG 133
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL- 443
L DGSEY G YV + + + +HR ++ALV AGVD LA ETIP++ E AL+ LL
Sbjct: 134 AFLADGSEYRGDYV--VPKEKMKDFHRGRIQALVEAGVDILACETIPSKAETEALIDLLT 191
Query: 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
EFP +AW SF+ +D H S G +S + L + +Q+ ++G NCV P V+ +
Sbjct: 192 SEFPSSEAWFSFTLRDGNHISDGTPLSE--MAALFKSVEQVVSLGFNCV-PDDVALV--A 246
Query: 504 IKQSHPTVQ---TIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQWLEEGVNIIGGCCE 559
+++ P V+ +VYPN G W++ +W E S L +W + G +IGGCC
Sbjct: 247 LQELKPLVKEGTMVVYPNSGEQWNAKAREWEGKRTEGSTLAKKTEEWRDAGAGLIGGCCR 306
Query: 560 VTSYEIQQMR 569
T +I M+
Sbjct: 307 TTPDDIAVMK 316
>gi|292669507|ref|ZP_06602933.1| homocysteine S-methyltransferase [Selenomonas noxia ATCC 43541]
gi|292648870|gb|EFF66842.1| homocysteine S-methyltransferase [Selenomonas noxia ATCC 43541]
Length = 325
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 135/262 (51%), Gaps = 22/262 (8%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG+F +++ D LWS+ L P+ E H D++RAGAD++ S+ YQA
Sbjct: 27 VIVLDGAFATELEARGFSVNDA--LWSAKALFERPDLVREVHLDYLRAGADVVTSASYQA 84
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
V+ K G+S +EA LL SV L A+D + AAS+GP
Sbjct: 85 TVEGFQKRGFSAEEAAALLQTSVHLAQEARDLYLAEHGAGGSAPL--------VAASVGP 136
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G+Y + E L A+H + L A D LA ET+P EA A+V+
Sbjct: 137 YGAYLADGSEYRGNY--GIDEDALTAFHAERLAILAAAHPDLLACETLPCLVEARAVVRA 194
Query: 187 LRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
LRE P AW SFSC+D H S G I AV + L + + A+G+NC P HV
Sbjct: 195 LREKEICIP---AWFSFSCRDAAHISDGTPI--AVCARWLDSVPEAAAVGLNCTAPQHVE 249
Query: 243 TLVRCIKQSHPTVQTIVYPNKG 264
L+R I++ ++YPN G
Sbjct: 250 ELIRAIRRETEK-PIVIYPNSG 270
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 143/315 (45%), Gaps = 24/315 (7%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V +LDG+F +++ D LWS+ L P+ E H D++R + S
Sbjct: 27 VIVLDGAFATELEARGFSVNDA--LWSAKALFERPDLVREVHLDYLRAGADVVTSASYQA 84
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-TAASIGPY 383
TV G + + A + +V A YLA S+ AAS+GPY
Sbjct: 85 TV-------EGFQKRGFSAEEAAALLQTSVHLAQEARDLYLAEHGAGGSAPLVAASVGPY 137
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L DGSEY G+Y + E L A+H + L A D LA ET+P EA A+V+ L
Sbjct: 138 GAYLADGSEYRGNY--GIDEDALTAFHAERLAILAAAHPDLLACETLPCLVEARAVVRAL 195
Query: 444 RE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
RE P AW SFSC+D H S G I AV + L + + A+G+NC P HV
Sbjct: 196 REKEICIP---AWFSFSCRDAAHISDGTPI--AVCARWLDSVPEAAAVGLNCTAPQHVEE 250
Query: 500 LVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
L+R I++ ++YPN G +D+ W + ++ + G IIGGCC
Sbjct: 251 LIRAIRRETEK-PIVIYPNSGESYDASDKTWHGAAENFAAAARRWR--AAGARIIGGCCR 307
Query: 560 VTSYEIQQMRIMIDE 574
+I + + E
Sbjct: 308 TGPRDIAAIAVWAKE 322
>gi|440231865|ref|YP_007345658.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Serratia marcescens
FGI94]
gi|440053570|gb|AGB83473.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Serratia marcescens
FGI94]
Length = 313
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 152/303 (50%), Gaps = 15/303 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D PLWS+ L P + H D+ R + A + T
Sbjct: 18 ILDGALATELEARGCDLSD--PLWSAKVLLENPTLIYQVHLDYFRAGAQCAITASYQATP 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
G + E + +V+ +A DYLA + A S+GPYG
Sbjct: 76 -------QGFLRRGLNEEQALTLIATSVQLAQQARADYLAQQPQAAPLLVAGSVGPYGAF 128
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y + +A++IA+HRP + AL AGVD LA ET+P+ E AL+ LL ++
Sbjct: 129 LADGSEYRGDY--QLPQAEMIAFHRPRIAALAAAGVDLLACETLPSFAELQALLTLLADY 186
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P AW SF+ +D H S G ++ V + L A+P Q A+GVNC+ V+ +R +
Sbjct: 187 PTLGAWFSFTLRDSEHLSDGTPLAE-VAALLNASP-QALAVGVNCIALEQVTPALRTLAA 244
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNIIGGCCEVTSYEI 565
T+ + YPN G +D+V W + E+ S++ + W + G +IGGCC T +I
Sbjct: 245 LT-TLPLLAYPNSGEHYDAVSKTWHACDGEHGSLIGQLDAWRQSGARLIGGCCRTTPQDI 303
Query: 566 QQM 568
+ +
Sbjct: 304 RAI 306
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 137/260 (52%), Gaps = 18/260 (6%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ +LDG+ +++ D PLWS+ L P + H D+ RAGA ++ YQ
Sbjct: 15 RALILDGALATELEARGCDLSD--PLWSAKVLLENPTLIYQVHLDYFRAGAQCAITASYQ 72
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASI 124
A + G +E++AL L+ SVQL A+ D Q P + A S+
Sbjct: 73 ATPQGFLRRGLNEEQALTLIATSVQLAQQARADYLAQQPQ----------AAPLLVAGSV 122
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSEY G Y + +A++IA+HRP + AL AGVD LA ET+P+ E AL+
Sbjct: 123 GPYGAFLADGSEYRGDY--QLPQAEMIAFHRPRIAALAAAGVDLLACETLPSFAELQALL 180
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
LL ++P AW SF+ +D H S G ++ V + L A+P Q A+GVNC+ V+
Sbjct: 181 TLLADYPTLGAWFSFTLRDSEHLSDGTPLAE-VAALLNASP-QALAVGVNCIALEQVTPA 238
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
+R + T+ + YPN G
Sbjct: 239 LRTLAALT-TLPLLAYPNSG 257
>gi|261822177|ref|YP_003260283.1| homocysteine methyltransferase [Pectobacterium wasabiae WPP163]
gi|261606190|gb|ACX88676.1| homocysteine S-methyltransferase [Pectobacterium wasabiae WPP163]
Length = 313
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 134/259 (51%), Gaps = 22/259 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D PLWS+ L P + H D+ AGA ++ YQA
Sbjct: 17 VLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHLDYFNAGAQCAITASYQATP 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
GYSE E+L L+ KSVQL A+D + N G + A S+GPYG
Sbjct: 75 QGFKARGYSEAESLTLIAKSVQLAAQARDDYRRD---------NSQAGVLLVAGSVGPYG 125
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y + +A+++A+HRP + AL AG D LA ET+P+ E AL+ LL
Sbjct: 126 AYLADGSEYRGDY--QLPQAEMMAFHRPRIAALHEAGADLLACETLPSFAEVEALIALLA 183
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSA---VTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
EFP +AW SF+ +D H S G + + V +C Q+ A+G+NC+ +V+ +
Sbjct: 184 EFPQAQAWFSFTLRDSEHLSDGTPLHTVLERVNAC-----PQVVAVGINCIALENVTPAL 238
Query: 246 RCIKQSHPTVQTIVYPNKG 264
+ + +VYPN G
Sbjct: 239 TYLSL-LTNLPLVVYPNSG 256
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 146/303 (48%), Gaps = 21/303 (6%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D PLWS+ L P + H D+ + A + T
Sbjct: 17 VLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHLDYFNAGAQCAITASYQATP 74
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
G +EA+ + +V+ +A DY + A S+GPYG
Sbjct: 75 -------QGFKARGYSEAESLTLIAKSVQLAAQARDDYRRDNSQAGVLLVAGSVGPYGAY 127
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y + +A+++A+HRP + AL AG D LA ET+P+ E AL+ LL EF
Sbjct: 128 LADGSEYRGDY--QLPQAEMMAFHRPRIAALHEAGADLLACETLPSFAEVEALIALLAEF 185
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSA---VTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
P +AW SF+ +D H S G + + V +C Q+ A+G+NC+ +V+ +
Sbjct: 186 PQAQAWFSFTLRDSEHLSDGTPLHTVLERVNAC-----PQVVAVGINCIALENVTPALTY 240
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNIIGGCCEVTS 562
+ + +VYPN G +D+V W D S+ Y+P+W G +IGGCC T
Sbjct: 241 LSL-LTNLPLVVYPNSGEQYDAVTKTWSSAHDAACSLAAYLPEWQAAGARLIGGCCRTTP 299
Query: 563 YEI 565
+I
Sbjct: 300 ADI 302
>gi|365903363|ref|ZP_09441186.1| homocysteine methyltransferase [Lactobacillus malefermentans KCTC
3548]
Length = 316
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 156/313 (49%), Gaps = 30/313 (9%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
++DG+ +++ +H I D D + LWS++ L +PEA + H+ + + A +
Sbjct: 15 VVDGAMATELEKHDI-DTD-NDLWSAMALIEQPEAIYDVHKSYFDAGAQVAIT------- 65
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPN-----VEALVRAGVDYLALIKPSISSQ-----T 376
+ Y + +D+ +A + A VE RA D + P+ +
Sbjct: 66 ----NTYQAN-IDAFVKAGVPADDAQKMITNAVEIAKRARDDAWTALTPAEQAAKGGFFA 120
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S+GPYG L +G+EY+G Y S+ E L +HR ++ L +GVD A ET P KEA
Sbjct: 121 AGSVGPYGAFLANGAEYTGDYNLSVDE--LKDFHRSRMQLLANSGVDLFAFETQPQFKEA 178
Query: 437 LALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
+L LL EFP Q AW+SFS +D G ++ AV+ + DQI AIGVNC +
Sbjct: 179 QSLANLLESEFPQQSAWISFSIRDSKTLCDGTSLAKAVS--YFNDHDQIIAIGVNCTAMT 236
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
+++ ++ IK + IVYPN G +D W E+E S P WL+ G +IG
Sbjct: 237 NITAAIQTIK-AVTDKPIIVYPNTGETYDPKTKTWQSQEEEASFEQLTPAWLKAGARMIG 295
Query: 556 GCCEVTSYEIQQM 568
GCC T +I +
Sbjct: 296 GCCRTTPKDIHDI 308
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 139/257 (54%), Gaps = 12/257 (4%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG+ +++ +H I D D + LWS++ L +PEA + H+ + AGA + ++ YQAN+
Sbjct: 15 VVDGAMATELEKHDI-DTD-NDLWSAMALIEQPEAIYDVHKSYFDAGAQVAITNTYQANI 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
D K G +A ++ +V++ A+D L G A S+GPYG
Sbjct: 73 DAFVKAGVPADDAQKMITNAVEIAKRARDDAWTA----LTPAEQAAKGGFFAAGSVGPYG 128
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L +G+EY+G Y S+ E L +HR ++ L +GVD A ET P KEA +L LL
Sbjct: 129 AFLANGAEYTGDYNLSVDE--LKDFHRSRMQLLANSGVDLFAFETQPQFKEAQSLANLLE 186
Query: 189 -EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP Q AW+SFS +D G ++ AV+ + DQI AIGVNC ++++ ++
Sbjct: 187 SEFPQQSAWISFSIRDSKTLCDGTSLAKAVS--YFNDHDQIIAIGVNCTAMTNITAAIQT 244
Query: 248 IKQSHPTVQTIVYPNKG 264
IK + IVYPN G
Sbjct: 245 IK-AVTDKPIIVYPNTG 260
>gi|406838319|ref|ZP_11097913.1| homocysteine methyltransferase [Lactobacillus vini DSM 20605]
Length = 307
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 150/302 (49%), Gaps = 27/302 (8%)
Query: 269 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLR 328
DG+ +++ + + + LWS+ L TEP + HR + G ++
Sbjct: 18 DGAMATELEKLGVNTAND--LWSAAALLTEPAKITQVHRSYFAA-----------GAMIA 64
Query: 329 DGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPS--ISSQT--AASIGPYG 384
+ Y ++ +++ + L++ VD + S I ++T A S+GPYG
Sbjct: 65 TTNTYQANFAAFQKRG----FNQVQFQQLIKQAVDCARQAQSSAKIPNETLVAGSVGPYG 120
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
L DGSEY+G+Y +TEA+ +H ++AL+ A VD LA+ET P E ALVKLL
Sbjct: 121 AYLADGSEYTGNY--QLTEAEFQNFHYLRIKALLAAQVDVLAIETQPKFAEVQALVKLLA 178
Query: 445 -EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
+F AW+SFS KD H G L++ A T L + QI A+G+NC ++ ++
Sbjct: 179 AKFSQTTAWISFSIKDPQHLCDGTLLAQAAT--WLNDQQQISAVGINCTDLLQITPALQT 236
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
+K+ + IVYPN G +D V +W + VPQW + G IIGGCC T
Sbjct: 237 LKK-YSVKPLIVYPNNGDEYDPVTKQWQAKHLSQNFSDLVPQWQKNGARIIGGCCRTTPT 295
Query: 564 EI 565
EI
Sbjct: 296 EI 297
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 134/255 (52%), Gaps = 21/255 (8%)
Query: 11 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDN 70
DG+ +++ + + + LWS+ L TEP + HR + AGA I ++ YQAN
Sbjct: 18 DGAMATELEKLGVNTAND--LWSAAALLTEPAKITQVHRSYFAAGAMIATTNTYQANFAA 75
Query: 71 LTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
K G+++ + L+ ++V A+ + P+ L A S+GPYG
Sbjct: 76 FQKRGFNQVQFQQLIKQAVDCARQAQSSA-KIPNETL------------VAGSVGPYGAY 122
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-RE 189
L DGSEY+G+Y +TEA+ +H ++AL+ A VD LA+ET P E ALVKLL +
Sbjct: 123 LADGSEYTGNY--QLTEAEFQNFHYLRIKALLAAQVDVLAIETQPKFAEVQALVKLLAAK 180
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 249
F AW+SFS KD H G L++ A T L + QI A+G+NC ++ ++ +K
Sbjct: 181 FSQTTAWISFSIKDPQHLCDGTLLAQAAT--WLNDQQQISAVGINCTDLLQITPALQTLK 238
Query: 250 QSHPTVQTIVYPNKG 264
+ + IVYPN G
Sbjct: 239 K-YSVKPLIVYPNNG 252
>gi|325921035|ref|ZP_08182916.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Xanthomonas gardneri
ATCC 19865]
gi|325548484|gb|EGD19457.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Xanthomonas gardneri
ATCC 19865]
Length = 320
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 159/326 (48%), Gaps = 17/326 (5%)
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE 300
++ L R + P Q + + G LLDG+ +++ + D LWS+ L +PE
Sbjct: 1 MTILPRRPRADAPFSQALQH--DGYVLLDGALATELEQRGCDLNDA--LWSARVLMEQPE 56
Query: 301 ACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 360
+ HRD+ + A + T L ++ +D LIA +V +A
Sbjct: 57 LIYQVHRDYFAAGAQCAITASYQATPL----GFAARGLDLAQSQALIA---RSVALAAQA 109
Query: 361 GVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 420
D+L + A S+GPYG L DGSEY G Y ++ A L+ +HRP + AL A
Sbjct: 110 RTDHLQSQPQAAPLWVAGSVGPYGAYLADGSEYRGDY--ALPLAQLMDFHRPRIAALADA 167
Query: 421 GVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN 480
GVD LA ET+P+ E +AL LL EFP AW SF+ +D H S G ++ + + L
Sbjct: 168 GVDLLACETLPSANEIVALRLLLEEFPQLHAWFSFTLRDAAHLSDGTPLAQVIPA--LDA 225
Query: 481 PDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSI 539
Q+ A+G+NC+ HV+ ++ + + + +VYPN G +D+ +W + S+
Sbjct: 226 CKQVIAVGINCIALEHVTAALQTLS-ALTALPLVVYPNSGEHYDAGDKRWHAGSTTACSL 284
Query: 540 LHYVPQWLEEGVNIIGGCCEVTSYEI 565
QWL G +IGGCC T +I
Sbjct: 285 ADQHAQWLAAGARLIGGCCRTTPRDI 310
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 130/256 (50%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ + D LWS+ L +PE + HRD+ AGA ++ YQA
Sbjct: 25 LLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G ++ L+ +SV L A+ Q+ + A S+GPYG
Sbjct: 83 LGFAARGLDLAQSQALIARSVALAAQARTDHLQS---------QPQAAPLWVAGSVGPYG 133
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y ++ A L+ +HRP + AL AGVD LA ET+P+ E +AL LL
Sbjct: 134 AYLADGSEYRGDY--ALPLAQLMDFHRPRIAALADAGVDLLACETLPSANEIVALRLLLE 191
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP AW SF+ +D H S G ++ + + L Q+ A+G+NC+ HV+ ++ +
Sbjct: 192 EFPQLHAWFSFTLRDAAHLSDGTPLAQVIPA--LDACKQVIAVGINCIALEHVTAALQTL 249
Query: 249 KQSHPTVQTIVYPNKG 264
+ + +VYPN G
Sbjct: 250 S-ALTALPLVVYPNSG 264
>gi|297559867|ref|YP_003678841.1| homocysteine S-methyltransferase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844315|gb|ADH66335.1| homocysteine S-methyltransferase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 303
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/257 (37%), Positives = 135/257 (52%), Gaps = 23/257 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +++ + +D+ G LWS+ L EP+ HRD+ AGAD+ ++ YQA+V
Sbjct: 12 VLDGGLATRLEAYG-RDLGGG-LWSARLLAEEPDLVRRVHRDYFEAGADVAIAAGYQASV 69
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
LT G +E EAL L+ +SV+L + +D G AA +GPYG
Sbjct: 70 PALTARGATESEALALIARSVELARAERDA----------------FGSGLVAAGVGPYG 113
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
DGSEY+G Y + E L AWHR L +G D LA ET+P+ EA AL +LL
Sbjct: 114 AARADGSEYTGDY--DLDEEGLYAWHRERWRVLADSGADLLACETVPSAAEARALARLLA 171
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPD-QIQAIGVNCVRPSHVSTLVRC 247
E PG +AW+SFSC+D S G + A + D ++ A+GVNC P HV LVR
Sbjct: 172 ETPGARAWISFSCRDGERVSDGTPLREAAAGLAPLHADGRLVAVGVNCTAPRHVPALVRA 231
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + + YPN G
Sbjct: 232 VAAC--GLPAVAYPNSG 246
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 149/315 (47%), Gaps = 21/315 (6%)
Query: 261 PNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASI 320
P++ +LDG +++ + +D+ G LWS+ L EP+ HRD+ + A +
Sbjct: 6 PSRRPLVLDGGLATRLEAYG-RDLGGG-LWSARLLAEEPDLVRRVHRDYFEAGADVAIAA 63
Query: 321 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASI 380
G +V TE++ +A +VE L RA D S AA +
Sbjct: 64 GYQASV-------PALTARGATESEALALIARSVE-LARAERDAFG------SGLVAAGV 109
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GPYG DGSEY+G Y + E L AWHR L +G D LA ET+P+ EA AL
Sbjct: 110 GPYGAARADGSEYTGDY--DLDEEGLYAWHRERWRVLADSGADLLACETVPSAAEARALA 167
Query: 441 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPD-QIQAIGVNCVRPSHVST 499
+LL E PG +AW+SFSC+D S G + A + D ++ A+GVNC P HV
Sbjct: 168 RLLAETPGARAWISFSCRDGERVSDGTPLREAAAGLAPLHADGRLVAVGVNCTAPRHVPA 227
Query: 500 LVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
LVR + + + YPN G WD+ +W T + W E G ++GGCC
Sbjct: 228 LVRAVAAC--GLPAVAYPNSGEEWDAARGRWTGTAEPEEFGRAAVGWYEAGAVLVGGCCR 285
Query: 560 VTSYEIQQMRIMIDE 574
++ +R +D
Sbjct: 286 TGPEHVRSVRAHLDR 300
>gi|359778030|ref|ZP_09281301.1| homocysteine S-methyltransferase [Arthrobacter globiformis NBRC
12137]
gi|359304493|dbj|GAB15130.1| homocysteine S-methyltransferase [Arthrobacter globiformis NBRC
12137]
Length = 319
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 139/255 (54%), Gaps = 17/255 (6%)
Query: 10 LDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVD 69
+DG+ +++ H D PLWS+ L +P+ HRD+ RAGA + ++ YQA
Sbjct: 19 VDGALATELEAHGCHLDD--PLWSAKVLLEQPQLVKHVHRDYFRAGAAVAITASYQATPQ 76
Query: 70 NLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGT 129
+ G E+EAL+L+ SV+L + A+ + + N G + A S+GPYG
Sbjct: 77 GFARRGIDEEEALELVALSVRLADEARSE---------HLAENPGAGPLLIAGSVGPYGA 127
Query: 130 VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE 189
L DGSEY G Y S E + +HRP V ALV AG D+LA ET+P+ EA ALV+L++E
Sbjct: 128 YLSDGSEYRGDYFLSRNE--FLEFHRPRVAALVDAGADFLACETLPSLPEAEALVELMKE 185
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 249
F + WLSF+ +D H S G ++ V A P + AIGVNCV V+ + ++
Sbjct: 186 F-DVEGWLSFTLRDGGHISDGTPLAQ-VAKLSRAQP-SVVAIGVNCVPLELVAPSLGALR 242
Query: 250 QSHPTVQTIVYPNKG 264
++ T I YPN G
Sbjct: 243 KATDT-PLIAYPNSG 256
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 152/314 (48%), Gaps = 23/314 (7%)
Query: 268 LDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVL 327
+DG+ +++ H D PLWS+ L +P+ HRD+ R A++ +
Sbjct: 19 VDGALATELEAHGCHLDD--PLWSAKVLLEQPQLVKHVHRDYFR----AGAAVAITASYQ 72
Query: 328 RDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVL 387
++ +D +L+A +V A ++LA + A S+GPYG L
Sbjct: 73 ATPQGFARRGIDEEEALELVAL---SVRLADEARSEHLAENPGAGPLLIAGSVGPYGAYL 129
Query: 388 RDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFP 447
DGSEY G Y S E + +HRP V ALV AG D+LA ET+P+ EA ALV+L++EF
Sbjct: 130 SDGSEYRGDYFLSRNE--FLEFHRPRVAALVDAGADFLACETLPSLPEAEALVELMKEF- 186
Query: 448 GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQS 507
+ WLSF+ +D H S G ++ V A P + AIGVNCV V+ + ++++
Sbjct: 187 DVEGWLSFTLRDGGHISDGTPLAQ-VAKLSRAQP-SVVAIGVNCVPLELVAPSLGALRKA 244
Query: 508 HPTVQTIVYPNKGGVWDSVHMKWL--------DTEDEYSILHYVPQWLEEGVNIIGGCCE 559
T I YPN G +D+V W D S+ W E G +IGGCC
Sbjct: 245 TDT-PLIAYPNSGESYDAVSKTWRPATAIGGPDGNHAASLAEGTALWRELGARLIGGCCR 303
Query: 560 VTSYEIQQMRIMID 573
T +I + ++ +
Sbjct: 304 TTPEDIAAVAMLTE 317
>gi|417005632|ref|ZP_11944225.1| homocysteine methyltransferase [Streptococcus agalactiae FSL
S3-026]
gi|341577445|gb|EGS27853.1| homocysteine methyltransferase [Streptococcus agalactiae FSL
S3-026]
Length = 314
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 156/272 (57%), Gaps = 17/272 (6%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K +L G+ +++ DV G LWS+ YL +P A H +IRAGADI+ +S YQ
Sbjct: 12 KALILHGALGTELESRGC-DVSGK-LWSAKYLIEDPAAIQTIHEGYIRAGADIVTTSTYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAAS 123
A + L ++G SE +A DL+ +VQL +A+++ ++ T + + + L++G
Sbjct: 70 ATLQGLAQVGVSESQAEDLIRLTVQLAKAAREQVWKSLTKEEKSERIYPLISG------D 123
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPY L DGSEY+G Y + + L +HR +E L+ GVD LALETIP+ +EA AL
Sbjct: 124 VGPYAAFLADGSEYTGLY--DIDKEGLKNFHRHRIELLLDEGVDLLALETIPSAQEAEAL 181
Query: 184 VKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++LL E FP +A++SF+ +D S G ++ + + +P Q+ A+G+NC PS V+
Sbjct: 182 IELLAEDFPQVEAYMSFTSQDGKTISDGSAVAD-LAKAIDVSP-QVVALGINCSSPSLVA 239
Query: 243 TLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTS 274
++ I + + YPN G ++ DG+ S
Sbjct: 240 DFLQAIAE-QTNKPLVTYPNSG-EVYDGASQS 269
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 156/315 (49%), Gaps = 23/315 (7%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
+K +L G+ +++ DV G LWS+ YL +P A H +IR + +
Sbjct: 10 SKKALILHGALGTELESRGC-DVSGK-LWSAKYLIEDPAAIQTIHEGYIRAGADIVTT-S 66
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL--ALIKPSISSQT--- 376
Y L+ ++ V DLI R V+ L +A + + +L K S +
Sbjct: 67 TYQATLQGLAQVG---VSESQAEDLI---RLTVQ-LAKAAREQVWKSLTKEEKSERIYPL 119
Query: 377 -AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
+ +GPY L DGSEY+G Y + + L +HR +E L+ GVD LALETIP+ +E
Sbjct: 120 ISGDVGPYAAFLADGSEYTGLY--DIDKEGLKNFHRHRIELLLDEGVDLLALETIPSAQE 177
Query: 436 ALALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
A AL++LL E FP +A++SF+ +D S G ++ + + +P Q+ A+G+NC P
Sbjct: 178 AEALIELLAEDFPQVEAYMSFTSQDGKTISDGSAVAD-LAKAIDVSP-QVVALGINCSSP 235
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNI 553
S V+ ++ I + + YPN G V+D W + D +++L W + G +
Sbjct: 236 SLVADFLQAIAE-QTNKPLVTYPNSGEVYDGASQSWQSSPDHSHTLLENTSDWQKLGAQV 294
Query: 554 IGGCCEVTSYEIQQM 568
+GGCC +I +
Sbjct: 295 VGGCCRTRPADIADL 309
>gi|288936924|ref|YP_003440983.1| homocysteine S-methyltransferase [Klebsiella variicola At-22]
gi|288891633|gb|ADC59951.1| homocysteine S-methyltransferase [Klebsiella variicola At-22]
Length = 310
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 148/303 (48%), Gaps = 15/303 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
LLDG+ +++ D LWS+ L P+ + H D+ R + A + T
Sbjct: 18 LLDGAMATELEARGCDLADS--LWSAKVLLENPQLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+G + +A A +VE +A YLA + + A SIGPYG
Sbjct: 76 -------AGFAARGLDDAQSRALIGKSVELARKAREAYLAENPQAGTLLVAGSIGPYGAF 128
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y S E +HRP VEAL+ AG D LA ET+P+ E AL LL+++
Sbjct: 129 LADGSEYRGDYQRSAAE--FQDFHRPRVEALLDAGADLLACETLPSFAEIQALTALLQDY 186
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P +AW SF+ +D H S G + V + L NP Q+ A+G+NC+ + + +
Sbjct: 187 PRARAWYSFTLRDAEHLSDGTPLRE-VMAALADNP-QVVAVGINCIALENTPAALAHL-H 243
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQWLEEGVNIIGGCCEVTSYEI 565
S + +VYPN G +D+V W + + L Y+PQWL G +IGGCC T +I
Sbjct: 244 SLTALPLVVYPNSGEHYDAVSKTWHHHGEACATLADYLPQWLAAGAKLIGGCCRTTPKDI 303
Query: 566 QQM 568
+
Sbjct: 304 AAL 306
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 129/256 (50%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L P+ + H D+ RAGA + ++ YQA
Sbjct: 18 LLDGAMATELEARGCDLADS--LWSAKVLLENPQLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G + ++ L+ KSV+L A++ N G + A SIGPYG
Sbjct: 76 AGFAARGLDDAQSRALIGKSVELARKAREAYLAE---------NPQAGTLLVAGSIGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y S E +HRP VEAL+ AG D LA ET+P+ E AL LL+
Sbjct: 127 AFLADGSEYRGDYQRSAAE--FQDFHRPRVEALLDAGADLLACETLPSFAEIQALTALLQ 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
++P +AW SF+ +D H S G + V + L NP Q+ A+G+NC+ + + +
Sbjct: 185 DYPRARAWYSFTLRDAEHLSDGTPLRE-VMAALADNP-QVVAVGINCIALENTPAALAHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S + +VYPN G
Sbjct: 243 -HSLTALPLVVYPNSG 257
>gi|401564628|ref|ZP_10805506.1| homocysteine S-methyltransferase [Selenomonas sp. FOBRC6]
gi|400188625|gb|EJO22776.1| homocysteine S-methyltransferase [Selenomonas sp. FOBRC6]
Length = 310
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 132/266 (49%), Gaps = 30/266 (11%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG+F +++ D LWS+ L P+ + H D++RAGAD++ S+ YQA
Sbjct: 13 VIVLDGAFATELEARGFSVNDA--LWSAKALFERPDLVRDVHLDYLRAGADVVTSASYQA 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD-------KENQTPDINLNKTFNLLTGHIE 119
V+ K G+SE EA LL KSV L A+D N P +
Sbjct: 71 TVEGFMKRGFSEAEAAALLQKSVHLAQEARDLYLAERGTHNPAPLV-------------- 116
Query: 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 179
AAS+GPYG L DGSEY G Y + E L +H + L A D LA ET+P E
Sbjct: 117 -AASVGPYGAYLADGSEYRGDY--DVDEDALTEFHAGRLRLLTAAQPDLLACETLPCLIE 173
Query: 180 ALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 238
A A+V+ LR E AW SFSC+D H S G I+ L + AIG+NC P
Sbjct: 174 ARAIVRALRAEKIRIPAWFSFSCRDAAHISDGTEIAECAR--FLDGVPEAAAIGLNCTAP 231
Query: 239 SHVSTLVRCIKQSHPTVQTIVYPNKG 264
+V L+R I+Q IVYPN G
Sbjct: 232 QYVEELIRTIRQ-ETAKPIIVYPNSG 256
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 141/306 (46%), Gaps = 18/306 (5%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V +LDG+F +++ D LWS+ L P+ + H D++R + S
Sbjct: 13 VIVLDGAFATELEARGFSVNDA--LWSAKALFERPDLVRDVHLDYLRAGADVVTSASYQA 70
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKP-SISSQTAASIGPY 383
TV G +EA+ A + +V A YLA + + AAS+GPY
Sbjct: 71 TV-------EGFMKRGFSEAEAAALLQKSVHLAQEARDLYLAERGTHNPAPLVAASVGPY 123
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L DGSEY G Y + E L +H + L A D LA ET+P EA A+V+ L
Sbjct: 124 GAYLADGSEYRGDY--DVDEDALTEFHAGRLRLLTAAQPDLLACETLPCLIEARAIVRAL 181
Query: 444 R-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
R E AW SFSC+D H S G I+ L + AIG+NC P +V L+R
Sbjct: 182 RAEKIRIPAWFSFSCRDAAHISDGTEIAECAR--FLDGVPEAAAIGLNCTAPQYVEELIR 239
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTS 562
I+Q IVYPN G +D+ W +++ L +W G +IGGCC +
Sbjct: 240 TIRQ-ETAKPIIVYPNSGESYDASDKTWHGAAEDFGAL--ACRWRSAGARLIGGCCRTSP 296
Query: 563 YEIQQM 568
EI ++
Sbjct: 297 REIVEI 302
>gi|329121708|ref|ZP_08250325.1| homocysteine S-methyltransferase [Dialister micraerophilus DSM
19965]
gi|327468178|gb|EGF13664.1| homocysteine S-methyltransferase [Dialister micraerophilus DSM
19965]
Length = 306
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 136/263 (51%), Gaps = 25/263 (9%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K+ ++DGSF S++ + + D LWS+ L PE + H ++ +GADI + YQ
Sbjct: 12 KLLVIDGSFASELEKAGLNLCDS--LWSAKALYENPELVTKVHENYFESGADIAITGSYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIE----TA 121
A+V G++ ++A++L+ SV+L AK+ N L H E A
Sbjct: 70 AHVQGFLGKGFTHEKAIELIKLSVKLAKKAKE--------------NCLKKHPERKLAIA 115
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
A++GPYG L DGSEY G+Y S+ E L +H +E+L D+ A ETIP+ EA
Sbjct: 116 AAVGPYGAYLADGSEYVGNYGLSVKE--LEEFHEEKIESLASENPDFFAFETIPSFDEAR 173
Query: 182 ALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 241
A V +L+ W +FSCKD+ H S G IS L +Q+ AIGVNC +P ++
Sbjct: 174 AYVNILKRHENITGWFTFSCKDEKHISEGVEISEVAK--FLDKENQVHAIGVNCTKPEYI 231
Query: 242 STLVRCIKQSHPTVQTIVYPNKG 264
L+ IK++ VY N G
Sbjct: 232 EPLICEIKKATDK-SVAVYSNTG 253
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 149/316 (47%), Gaps = 19/316 (6%)
Query: 255 VQTIVYPNKGVKLL--DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRG 312
+ TI+ K KLL DGSF S++ + + D LWS+ L PE + H ++
Sbjct: 1 MSTIIELLKEKKLLVIDGSFASELEKAGLNLCDS--LWSAKALYENPELVTKVHENYF-- 56
Query: 313 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSI 372
E+ A I G+ + G T I + +V+ +A + L P
Sbjct: 57 --ESGADIAITGSY---QAHVQGFLGKGFTHEKAIELIKLSVKLAKKAKENCLKK-HPER 110
Query: 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA 432
AA++GPYG L DGSEY G+Y S+ E L +H +E+L D+ A ETIP+
Sbjct: 111 KLAIAAAVGPYGAYLADGSEYVGNYGLSVKE--LEEFHEEKIESLASENPDFFAFETIPS 168
Query: 433 EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 492
EA A V +L+ W +FSCKD+ H S G IS L +Q+ AIGVNC
Sbjct: 169 FDEARAYVNILKRHENITGWFTFSCKDEKHISEGVEISEVAK--FLDKENQVHAIGVNCT 226
Query: 493 RPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552
+P ++ L+ IK++ VY N G +D V W +++ Y +W E G
Sbjct: 227 KPEYIEPLICEIKKATDK-SVAVYSNTGENYDPVTKTWSGELADFT--KYAKRWYESGAK 283
Query: 553 IIGGCCEVTSYEIQQM 568
+IGGCC EI+ +
Sbjct: 284 LIGGCCRTLPEEIKAV 299
>gi|386596853|ref|YP_006093253.1| homocysteine S-methyltransferase [Escherichia coli DH1]
gi|387620023|ref|YP_006127650.1| homocysteine S-methyltransferase [Escherichia coli DH1]
gi|260450542|gb|ACX40964.1| homocysteine S-methyltransferase [Escherichia coli DH1]
gi|315134946|dbj|BAJ42105.1| homocysteine S-methyltransferase [Escherichia coli DH1]
Length = 310
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 149/309 (48%), Gaps = 15/309 (4%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
+ + LLDG+ +++ D LWS+ L PE E H D+ R + A +
Sbjct: 13 KQDILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAEAQCAITAS 70
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
T +G + EA A +VE +A YLA + + A S+G
Sbjct: 71 YQATP-------AGFAARGLDEAQSKALIGKSVELARKAREAYLAENPQAGTLLVAGSVG 123
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG L DGSEY G Y S+ A+HRP VEAL+ AG D LA ET+P E AL +
Sbjct: 124 PYGAYLADGSEYRGDYHCSVEA--FQAFHRPRVEALLDAGADLLACETLPNFSEIEALAE 181
Query: 442 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
LL +P +AW SF+ +D H S G + V LLA Q+ A+G+NC+ + + +
Sbjct: 182 LLTAYPRARAWFSFTLRDSEHLSDGTPLRDVVA--LLAGYPQVVALGINCIALENTTAAL 239
Query: 502 RCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQWLEEGVNIIGGCCEV 560
+ + + +VYPN G +D+V W + + L Y+PQW G +IGGCC
Sbjct: 240 QHL-HGLTVLPLVVYPNSGEHYDAVSKTWHHHGEHCAQLADYLPQWQAAGARLIGGCCRT 298
Query: 561 TSYEIQQMR 569
T +I ++
Sbjct: 299 TPADIAALK 307
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 127/258 (49%), Gaps = 16/258 (6%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ D LWS+ L PE E H D+ RA A ++ YQA
Sbjct: 16 ILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAEAQCAITASYQA 73
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
G E ++ L+ KSV+L A++ N G + A S+GP
Sbjct: 74 TPAGFAARGLDEAQSKALIGKSVELARKAREA---------YLAENPQAGTLLVAGSVGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y S+ A+HRP VEAL+ AG D LA ET+P E AL +L
Sbjct: 125 YGAYLADGSEYRGDYHCSVEA--FQAFHRPRVEALLDAGADLLACETLPNFSEIEALAEL 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L +P +AW SF+ +D H S G + V LLA Q+ A+G+NC+ + + ++
Sbjct: 183 LTAYPRARAWFSFTLRDSEHLSDGTPLRDVVA--LLAGYPQVVALGINCIALENTTAALQ 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
+ + +VYPN G
Sbjct: 241 HL-HGLTVLPLVVYPNSG 257
>gi|22537452|ref|NP_688303.1| homocysteine methyltransferase [Streptococcus agalactiae 2603V/R]
gi|22534329|gb|AAN00176.1|AE014251_20 homocysteine S-methyltransferase MmuM, putative [Streptococcus
agalactiae 2603V/R]
Length = 314
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 155/272 (56%), Gaps = 17/272 (6%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K +L G+ +++ DV G LWS+ YL +P A H D+IRAGADI+ +S YQ
Sbjct: 12 KTLILHGALGTELESRGC-DVSGK-LWSAKYLIEDPAAIQTIHEDYIRAGADIVTTSTYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAAS 123
A + L ++G SE + DL+ +VQL +A+++ ++ T + + + L++G
Sbjct: 70 ATLQGLAQVGVSESQTEDLIRLTVQLAKAAREQVWKSLTKEEKSERIYPLISG------D 123
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPY L DGSEY+G Y + + L +HR +E L+ GVD LALETIP +EA AL
Sbjct: 124 VGPYAAFLADGSEYTGLY--DIDKQGLKNFHRHRIELLLDEGVDILALETIPNAQEAEAL 181
Query: 184 VKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++LL E FP +A++SF+ +D S G ++ + + +P Q+ A+G+NC PS V+
Sbjct: 182 IELLAEDFPQVEAYMSFTSQDGKTISDGSAVAD-LAKAIDVSP-QVVALGINCSSPSLVA 239
Query: 243 TLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTS 274
++ I + + YPN G ++ DG+ S
Sbjct: 240 DFLQAIAE-QTNKPLVTYPNSG-EVYDGASQS 269
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 150/294 (51%), Gaps = 22/294 (7%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMT 342
DV G LWS+ YL +P A H D+IR + + Y L+ ++ +S T
Sbjct: 30 DVSGK-LWSAKYLIEDPAAIQTIHEDYIRAGADIVTT-STYQATLQGLAQVG--VSESQT 85
Query: 343 EADLIAWHRPNVEALVRAGVDYL--ALIKPSISSQT----AASIGPYGTVLRDGSEYSGH 396
E DLI R V+ L +A + + +L K S + + +GPY L DGSEY+G
Sbjct: 86 E-DLI---RLTVQ-LAKAAREQVWKSLTKEEKSERIYPLISGDVGPYAAFLADGSEYTGL 140
Query: 397 YVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE-FPGQKAWLSF 455
Y + + L +HR +E L+ GVD LALETIP +EA AL++LL E FP +A++SF
Sbjct: 141 Y--DIDKQGLKNFHRHRIELLLDEGVDILALETIPNAQEAEALIELLAEDFPQVEAYMSF 198
Query: 456 SCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIV 515
+ +D S G ++ + + +P Q+ A+G+NC PS V+ ++ I + +
Sbjct: 199 TSQDGKTISDGSAVAD-LAKAIDVSP-QVVALGINCSSPSLVADFLQAIAE-QTNKPLVT 255
Query: 516 YPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
YPN G V+D W + D +++L W + G ++GGCC +I +
Sbjct: 256 YPNSGEVYDGASQSWQSSPDHSHTLLENTSDWQKLGAQVVGGCCRTRPADIADL 309
>gi|76787540|ref|YP_329947.1| homocysteine methyltransferase [Streptococcus agalactiae A909]
gi|406709698|ref|YP_006764424.1| homocysteine methyltransferase [Streptococcus agalactiae
GD201008-001]
gi|424049239|ref|ZP_17786790.1| homocysteine methyltransferase [Streptococcus agalactiae ZQ0910]
gi|76562597|gb|ABA45181.1| homocysteine S-methyltransferase [Streptococcus agalactiae A909]
gi|389649439|gb|EIM70921.1| homocysteine methyltransferase [Streptococcus agalactiae ZQ0910]
gi|406650583|gb|AFS45984.1| homocysteine methyltransferase [Streptococcus agalactiae
GD201008-001]
Length = 314
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/283 (36%), Positives = 160/283 (56%), Gaps = 21/283 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K +L G+ +++ DV G LWS YL +P A H D+IRAGADI+ +S YQ
Sbjct: 12 KALILHGALGTELESRDC-DVSGK-LWSDKYLIEDPAAIQTIHEDYIRAGADIVTTSTYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAAS 123
A + L ++G SE +A DL+ +VQL + +++ ++ T + + + L++G
Sbjct: 70 ATLQGLAQVGVSESQAEDLIRLTVQLAKAVREQVWKSLTKEEKSERIYPLISG------D 123
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPY L DGSEY+G Y + + L +HR +E L+ GVD LALETIP +EA AL
Sbjct: 124 VGPYAAFLADGSEYTGLY--DIYKEGLKNFHRHRIELLLDEGVDLLALETIPNAQEAEAL 181
Query: 184 VKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++LL E FP +A++SF+ +D S G + + + + +P Q+ A+G+NC PS V+
Sbjct: 182 IELLVEDFPQVEAYMSFTSQDGKTISDGSAV-AGLAKAIDVSP-QVVALGINCSSPSLVA 239
Query: 243 TLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTS-QVSR---HTI 281
++ I + + YPN G ++ DG+ S Q SR HT+
Sbjct: 240 DFLQAIAE-QTDKPLVTYPNSG-EIYDGASQSWQSSRDHSHTL 280
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 153/313 (48%), Gaps = 19/313 (6%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
+K +L G+ +++ DV G LWS YL +P A H D+IR + +
Sbjct: 10 SKKALILHGALGTELESRDC-DVSGK-LWSDKYLIEDPAAIQTIHEDYIRAGADIVTT-S 66
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT----A 377
Y L+ ++ V DLI +A VR V + +L K S + +
Sbjct: 67 TYQATLQGLAQVG---VSESQAEDLIRLTVQLAKA-VREQV-WKSLTKEEKSERIYPLIS 121
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
+GPY L DGSEY+G Y + + L +HR +E L+ GVD LALETIP +EA
Sbjct: 122 GDVGPYAAFLADGSEYTGLY--DIYKEGLKNFHRHRIELLLDEGVDLLALETIPNAQEAE 179
Query: 438 ALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
AL++LL E FP +A++SF+ +D S G + + + + +P Q+ A+G+NC PS
Sbjct: 180 ALIELLVEDFPQVEAYMSFTSQDGKTISDGSAV-AGLAKAIDVSP-QVVALGINCSSPSL 237
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIG 555
V+ ++ I + + YPN G ++D W + D +++L W + G ++G
Sbjct: 238 VADFLQAIAE-QTDKPLVTYPNSGEIYDGASQSWQSSRDHSHTLLENTSDWQKLGAQVVG 296
Query: 556 GCCEVTSYEIQQM 568
GCC +I +
Sbjct: 297 GCCRTRPADIADL 309
>gi|25011419|ref|NP_735814.1| homocysteine methyltransferase [Streptococcus agalactiae NEM316]
gi|24412957|emb|CAD47036.1| unknown [Streptococcus agalactiae NEM316]
Length = 314
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/283 (36%), Positives = 160/283 (56%), Gaps = 21/283 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K +L G+ +++ DV G LWS YL +P A H D+IRAGADI+ +S YQ
Sbjct: 12 KALILHGALGTELESRGC-DVSGK-LWSDKYLIEDPAAIQTIHEDYIRAGADIVTTSTYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAAS 123
A + L ++G SE +A DL+ +VQL + +++ ++ T + + + L++G
Sbjct: 70 ATLQGLAQVGVSESQAEDLIRLTVQLAKAVREQVWKSLTKEEKSERIYPLISG------D 123
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPY L DGSEY+G Y + + L +HR +E L+ GVD LALETIP +EA AL
Sbjct: 124 VGPYAAFLADGSEYTGLY--DIYKEGLKNFHRHRIELLLDEGVDLLALETIPNAQEAEAL 181
Query: 184 VKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++LL E FP +A++SF+ +D S G + + + + +P Q+ A+G+NC PS V+
Sbjct: 182 IELLVEDFPQVEAYMSFTSQDGKTISDGSAV-AGLAKAIDVSP-QVVALGINCSSPSLVA 239
Query: 243 TLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTS-QVSR---HTI 281
++ I + + YPN G ++ DG+ S Q SR HT+
Sbjct: 240 DFLQAIAE-QTDKPLVTYPNSG-EIYDGASQSWQSSRDHSHTL 280
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 144/292 (49%), Gaps = 18/292 (6%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMT 342
DV G LWS YL +P A H D+IR + + Y L+ ++ V
Sbjct: 30 DVSGK-LWSDKYLIEDPAAIQTIHEDYIRAGADIVTT-STYQATLQGLAQVG---VSESQ 84
Query: 343 EADLIAWHRPNVEALVRAGVDYLALIKPSISSQT----AASIGPYGTVLRDGSEYSGHYV 398
DLI +A VR V + +L K S + + +GPY L DGSEY+G Y
Sbjct: 85 AEDLIRLTVQLAKA-VREQV-WKSLTKEEKSERIYPLISGDVGPYAAFLADGSEYTGLY- 141
Query: 399 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE-FPGQKAWLSFSC 457
+ + L +HR +E L+ GVD LALETIP +EA AL++LL E FP +A++SF+
Sbjct: 142 -DIYKEGLKNFHRHRIELLLDEGVDLLALETIPNAQEAEALIELLVEDFPQVEAYMSFTS 200
Query: 458 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 517
+D S G + + + + +P Q+ A+G+NC PS V+ ++ I + + YP
Sbjct: 201 QDGKTISDGSAV-AGLAKAIDVSP-QVVALGINCSSPSLVADFLQAIAE-QTDKPLVTYP 257
Query: 518 NKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
N G ++D W + D +++L W + G ++GGCC +I +
Sbjct: 258 NSGEIYDGASQSWQSSRDHSHTLLENTSDWQKLGAQVVGGCCRTRPADIADL 309
>gi|271964247|ref|YP_003338443.1| homocysteine methyltransferase [Streptosporangium roseum DSM 43021]
gi|270507422|gb|ACZ85700.1| homocysteine methyltransferase [Streptosporangium roseum DSM 43021]
Length = 287
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 126/234 (53%), Gaps = 24/234 (10%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQ 90
LWS+ L P + H D+ AGA++ ++ YQA++ + G S +EA +L+ SV+
Sbjct: 23 LWSAKLLLENPSVIRQAHLDYFTAGAEVATTASYQASIPAFVRRGLSAREAEELIVLSVR 82
Query: 91 LMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADL 150
L A+D TG + AAS+GPYG L +G+EY+G Y + E L
Sbjct: 83 LAAEARDSHG--------------TGTV--AASVGPYGAYLANGAEYTGDY--DLDEDGL 124
Query: 151 IAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG 210
WHR L +G D LA ETIP+ EA AL +LL E PG +AW+SFSC+D H S G
Sbjct: 125 ADWHRDRWHILAGSGADLLACETIPSYAEARALGRLLAETPGTRAWVSFSCRDGEHISDG 184
Query: 211 ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+ A + L A Q+ A+GVNC P H+++L+ I+ +VYPN G
Sbjct: 185 TPLKDA--AALFAGNPQVIAVGVNCTAPRHITSLIGRIEGK----PVMVYPNSG 232
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 133/281 (47%), Gaps = 24/281 (8%)
Query: 289 LWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA 348
LWS+ L P + H D+ E A + + Y + + L A
Sbjct: 23 LWSAKLLLENPSVIRQAHLDYFTAGAEVATT-----------ASYQAS-IPAFVRRGLSA 70
Query: 349 WHRPNVEALVRAGVDYLALIKPSISSQT-AASIGPYGTVLRDGSEYSGHYVDSMTEADLI 407
E L+ V A + S + T AAS+GPYG L +G+EY+G Y + E L
Sbjct: 71 ---REAEELIVLSVRLAAEARDSHGTGTVAASVGPYGAYLANGAEYTGDY--DLDEDGLA 125
Query: 408 AWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGE 467
WHR L +G D LA ETIP+ EA AL +LL E PG +AW+SFSC+D H S G
Sbjct: 126 DWHRDRWHILAGSGADLLACETIPSYAEARALGRLLAETPGTRAWVSFSCRDGEHISDGT 185
Query: 468 LISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVH 527
+ A + L A Q+ A+GVNC P H+++L+ I+ +VYPN G WD+ +
Sbjct: 186 PLKDA--AALFAGNPQVIAVGVNCTAPRHITSLIGRIEGK----PVMVYPNSGETWDAAN 239
Query: 528 MKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+WL D W G +GGCC T I+Q+
Sbjct: 240 RRWLGLADPAEFGAAAAGWHAAGSAFVGGCCRTTPEHIRQI 280
>gi|15230929|ref|NP_189219.1| homocysteine S-methyltransferase 1 [Arabidopsis thaliana]
gi|50400681|sp|Q9SDL7.1|HMT1_ARATH RecName: Full=Homocysteine S-methyltransferase 1; AltName:
Full=S-methylmethionine:homocysteine methyltransferase
1; Short=AtHMT-1; Short=SMM:Hcy S-methyltransferase 1
gi|6685161|gb|AAF23821.1|AF219222_1 homocysteine S-methyltransferase AtHMT-1 [Arabidopsis thaliana]
gi|9279594|dbj|BAB01052.1| homocysteine S-methyltransferase AtHMT-1 [Arabidopsis thaliana]
gi|17473823|gb|AAL38339.1| homocysteine S-methyltransferase AtHMT-1 [Arabidopsis thaliana]
gi|20148551|gb|AAM10166.1| homocysteine S-methyltransferase AtHMT-1 [Arabidopsis thaliana]
gi|332643566|gb|AEE77087.1| homocysteine S-methyltransferase 1 [Arabidopsis thaliana]
Length = 326
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 138/260 (53%), Gaps = 16/260 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG F +Q+ H D PLWS+V L PE H +++ AGADI+ +S YQA +
Sbjct: 22 VVDGGFATQLEIHGAAIND--PLWSAVSLIKNPELIKRVHMEYLEAGADIVVTSSYQATI 79
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G S +E+ LL KSV+L A+D+ + ++N AASIG YG
Sbjct: 80 PGFLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVSGHSYN----RALVAASIGSYG 135
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEYSGHY ++++ L +HR ++ LV AG D LA ETIP + EA A V+LL
Sbjct: 136 AYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLE 195
Query: 189 EFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCL--LANPDQIQAIGVNCVRPSHVSTLV 245
E Q AW+ F+ D GE + CL L + I A+G+NC P + L+
Sbjct: 196 EEKVQIPAWICFTSVDGEKAPSGE----SFEECLEPLNKSNNIYAVGINCAPPQFIENLI 251
Query: 246 RCIKQSHPTVQTI-VYPNKG 264
R K + T + I VYPN G
Sbjct: 252 R--KFAKLTKKAIVVYPNSG 269
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 160/335 (47%), Gaps = 32/335 (9%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+++ ++ ++ G ++DG F +Q+ H D PLWS+V L PE H
Sbjct: 3 LEKKSALLEDLIKKCGGCAVVDGGFATQLEIHGAAIND--PLWSAVSLIKNPELIKRVHM 60
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
+++ + + T+ G ++ + + + +VE V A +
Sbjct: 61 EYLEAGADIVVTSSYQATI-------PGFLSRGLSIEESESLLQKSVELAVEARDRFWEK 113
Query: 368 IKPSISSQT------AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG 421
+ +S + AASIG YG L DGSEYSGHY ++++ L +HR ++ LV AG
Sbjct: 114 VS-KVSGHSYNRALVAASIGSYGAYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAG 172
Query: 422 VDYLALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCL--L 478
D LA ETIP + EA A V+LL E Q AW+ F+ D GE + CL L
Sbjct: 173 PDLLAFETIPNKLEAQACVELLEEEKVQIPAWICFTSVDGEKAPSGE----SFEECLEPL 228
Query: 479 ANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTI-VYPNKGGVWDSVHMKWLDTE--- 534
+ I A+G+NC P + L+R K + T + I VYPN G VWD +WL ++
Sbjct: 229 NKSNNIYAVGINCAPPQFIENLIR--KFAKLTKKAIVVYPNSGEVWDGKAKQWLPSQCFG 286
Query: 535 -DEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
DE+ + + +W + G +IGGCC T I +
Sbjct: 287 DDEFEM--FATKWRDLGAKLIGGCCRTTPSTINAI 319
>gi|291289384|ref|YP_003517716.1| homocysteine S-methyltransferase [Klebsiella pneumoniae]
gi|290792345|gb|ADD63670.1| homocysteine S-methyltransferase [Klebsiella pneumoniae]
Length = 331
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 148/306 (48%), Gaps = 15/306 (4%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG+ +++ D LWS+ L PE E H D+ R + A +
Sbjct: 37 ILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQA 94
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
T +G + EA A +VE +A YLA + + A S+GPYG
Sbjct: 95 TP-------AGFAARGLDEAQSKALIGKSVELARKAREAYLAENPQAGTLLVAGSVGPYG 147
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
L DGSEY G Y S+ A+HRP VEAL+ AG D LA ET+P E AL +LL
Sbjct: 148 AYLADGSEYRGDYHCSVEA--FQAFHRPRVEALLDAGADLLACETLPNFSEIEALAELLT 205
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 504
+P +AW SF+ +D H S G + V LLA Q+ A+G+NC+ + + ++ +
Sbjct: 206 AYPRARAWFSFTLRDSEHLSDGTPLRDVVA--LLAGYPQVVALGINCIALENTTAALQHL 263
Query: 505 KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQWLEEGVNIIGGCCEVTSY 563
+ +VYPN G +D+V W + + L Y+PQW G +IGGCC T
Sbjct: 264 -HGLTVLPLVVYPNSGEHYDAVSKTWHHHGEHCAQLADYLPQWQAAGARLIGGCCRTTPA 322
Query: 564 EIQQMR 569
+I ++
Sbjct: 323 DIAALK 328
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 128/258 (49%), Gaps = 16/258 (6%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ D LWS+ L PE E H D+ RAGA ++ YQA
Sbjct: 37 ILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQA 94
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
G E ++ L+ KSV+L A++ N G + A S+GP
Sbjct: 95 TPAGFAARGLDEAQSKALIGKSVELARKAREA---------YLAENPQAGTLLVAGSVGP 145
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y S+ A+HRP VEAL+ AG D LA ET+P E AL +L
Sbjct: 146 YGAYLADGSEYRGDYHCSVEA--FQAFHRPRVEALLDAGADLLACETLPNFSEIEALAEL 203
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L +P +AW SF+ +D H S G + V LLA Q+ A+G+NC+ + + ++
Sbjct: 204 LTAYPRARAWFSFTLRDSEHLSDGTPLRDVVA--LLAGYPQVVALGINCIALENTTAALQ 261
Query: 247 CIKQSHPTVQTIVYPNKG 264
+ + +VYPN G
Sbjct: 262 HL-HGLTVLPLVVYPNSG 278
>gi|206580103|ref|YP_002240178.1| homocysteine methyltransferase [Klebsiella pneumoniae 342]
gi|290510019|ref|ZP_06549389.1| homocysteine S-methyltransferase [Klebsiella sp. 1_1_55]
gi|206569161|gb|ACI10937.1| homocysteine S-methyltransferase [Klebsiella pneumoniae 342]
gi|289776735|gb|EFD84733.1| homocysteine S-methyltransferase [Klebsiella sp. 1_1_55]
Length = 310
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 148/303 (48%), Gaps = 15/303 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
LLDG+ +++ D LWS+ L P+ + H D+ R + A + T
Sbjct: 18 LLDGAMATELEARGCDLADS--LWSAKVLLENPQLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+G + +A A +VE +A YLA + + A S+GPYG
Sbjct: 76 -------AGFAARGLDDAQSRALIGKSVELARKAREAYLAENPQAGTLLVAGSVGPYGAF 128
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y S E +HRP VEAL+ AG D LA ET+P+ E AL LL+++
Sbjct: 129 LADGSEYRGDYQRSAAE--FQDFHRPRVEALLDAGADLLACETLPSFAEIQALTALLQDY 186
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P +AW SF+ +D H S G + V + L NP Q+ A+G+NC+ + + +
Sbjct: 187 PRARAWYSFTLRDAEHLSDGTPLRE-VMAALADNP-QVVAVGINCIALENTPAALAHL-H 243
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQWLEEGVNIIGGCCEVTSYEI 565
S + +VYPN G +D+V W + + L Y+PQWL G +IGGCC T +I
Sbjct: 244 SLTALPLVVYPNSGEHYDAVSKTWHHHGEACATLADYLPQWLAAGAKLIGGCCRTTPKDI 303
Query: 566 QQM 568
+
Sbjct: 304 AAL 306
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 129/256 (50%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L P+ + H D+ RAGA + ++ YQA
Sbjct: 18 LLDGAMATELEARGCDLADS--LWSAKVLLENPQLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G + ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGFAARGLDDAQSRALIGKSVELARKAREAYLAE---------NPQAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y S E +HRP VEAL+ AG D LA ET+P+ E AL LL+
Sbjct: 127 AFLADGSEYRGDYQRSAAE--FQDFHRPRVEALLDAGADLLACETLPSFAEIQALTALLQ 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
++P +AW SF+ +D H S G + V + L NP Q+ A+G+NC+ + + +
Sbjct: 185 DYPRARAWYSFTLRDAEHLSDGTPLRE-VMAALADNP-QVVAVGINCIALENTPAALAHL 242
Query: 249 KQSHPTVQTIVYPNKG 264
S + +VYPN G
Sbjct: 243 -HSLTALPLVVYPNSG 257
>gi|113204693|gb|ABI34093.1| homocysteine S-methyltransferase [Medicago sativa]
Length = 295
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 147/271 (54%), Gaps = 15/271 (5%)
Query: 1 MSKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQ 60
++K ++DG F +++ RH + D PLWS+ L T P H D++ +GA+II
Sbjct: 1 LNKCGGYGIIDGGFATELERHGVDLND--PLWSAKCLFTSPHLVRRVHLDYLDSGANIIL 58
Query: 61 SSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKD--KENQTPD-INLNKTFNLLTGH 117
+S YQA + G+S++E LL + V+L A+D + T D + + +
Sbjct: 59 TSSYQATIQGFEAKGFSKEEGQALLRRRVELAREARDIYYDRCTKDSFDFIRDERYRSRP 118
Query: 118 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 177
I AAS+G YG L DGSEY+G Y D++T L +HR V+ LV AG D +A ETIP +
Sbjct: 119 ILIAASVGSYGAYLADGSEYTGDYGDAVTVQTLKDFHRERVKILVDAGADLIAFETIPNK 178
Query: 178 KEALALVKLLREFPGQK-AWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGV 233
+A A +LL E + AW SFSCKD+ + G+ I +S SC Q+ A+GV
Sbjct: 179 LDAQAYAELLEEEGIEIPAWFSFSCKDENKVASGDSILECASIADSC-----PQVVAVGV 233
Query: 234 NCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
NC P + L+ IK++ + +VYPN G
Sbjct: 234 NCTAPRFIHGLISSIKKA-TSKPILVYPNSG 263
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 146/304 (48%), Gaps = 31/304 (10%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFI---------RGHI 314
G ++DG F +++ RH + D PLWS+ L T P H D++ +
Sbjct: 6 GYGIIDGGFATELERHGVDLND--PLWSAKCLFTSPHLVRRVHLDYLDSGANIILTSSYQ 63
Query: 315 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA--LVRAGVDYLALIKPSI 372
T G +G V+ EA I + R ++ +R D +P +
Sbjct: 64 ATIQGFEAKGFSKEEGQALLRRRVELAREARDIYYDRCTKDSFDFIR---DERYRSRPIL 120
Query: 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA 432
AAS+G YG L DGSEY+G Y D++T L +HR V+ LV AG D +A ETIP
Sbjct: 121 ---IAASVGSYGAYLADGSEYTGDYGDAVTVQTLKDFHRERVKILVDAGADLIAFETIPN 177
Query: 433 EKEALALVKLLREFPGQK-AWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIG 488
+ +A A +LL E + AW SFSCKD+ + G+ I +S SC Q+ A+G
Sbjct: 178 KLDAQAYAELLEEEGIEIPAWFSFSCKDENKVASGDSILECASIADSC-----PQVVAVG 232
Query: 489 VNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDT--EDEYSILHYVPQW 546
VNC P + L+ IK++ + +VYPN G +++ + W+ + E E + Y+ +W
Sbjct: 233 VNCTAPRFIHGLISSIKKA-TSKPILVYPNSGETYNADNNTWVKSSGEAEEDFVPYIGKW 291
Query: 547 LEEG 550
G
Sbjct: 292 RYAG 295
>gi|16128246|ref|NP_414795.1| CP4-6 prophage; S-methylmethionine:homocysteine methyltransferase
[Escherichia coli str. K-12 substr. MG1655]
gi|170079885|ref|YP_001729205.1| homocysteine methyltransferase [Escherichia coli str. K-12 substr.
DH10B]
gi|187736899|ref|YP_001816637.1| homocysteine methyltransferase [Escherichia coli 1520]
gi|386703522|ref|YP_006167369.1| Homocysteine S-methyltransferase [Escherichia coli P12b]
gi|388476372|ref|YP_488556.1| S-methylmethionine:homocysteine methyltransferase [Escherichia coli
str. K-12 substr. W3110]
gi|417270676|ref|ZP_12058029.1| homocysteine S-methyltransferase [Escherichia coli 2.4168]
gi|417947527|ref|ZP_12590699.1| homocysteine methyltransferase [Escherichia coli XH140A]
gi|418959690|ref|ZP_13511587.1| homocysteine S-methyltransferase [Escherichia coli J53]
gi|432368295|ref|ZP_19611401.1| homocysteine S-methyltransferase [Escherichia coli KTE10]
gi|432484009|ref|ZP_19725936.1| homocysteine S-methyltransferase [Escherichia coli KTE212]
gi|432556480|ref|ZP_19793183.1| homocysteine S-methyltransferase [Escherichia coli KTE49]
gi|432669232|ref|ZP_19904782.1| homocysteine S-methyltransferase [Escherichia coli KTE119]
gi|432735771|ref|ZP_19970563.1| homocysteine S-methyltransferase [Escherichia coli KTE42]
gi|432979693|ref|ZP_20168477.1| homocysteine S-methyltransferase [Escherichia coli KTE211]
gi|433095098|ref|ZP_20281319.1| homocysteine S-methyltransferase [Escherichia coli KTE139]
gi|433172120|ref|ZP_20356686.1| homocysteine S-methyltransferase [Escherichia coli KTE232]
gi|450258532|ref|ZP_21902967.1| homocysteine methyltransferase [Escherichia coli S17]
gi|2495491|sp|Q47690.2|MMUM_ECOLI RecName: Full=Homocysteine S-methyltransferase; AltName:
Full=S-methylmethionine:homocysteine methyltransferase
gi|1552830|gb|AAB08682.1| similar to S. cerevisiae YLL062c [Escherichia coli]
gi|1786456|gb|AAC73364.1| CP4-6 prophage; S-methylmethionine:homocysteine methyltransferase
[Escherichia coli str. K-12 substr. MG1655]
gi|85674405|dbj|BAA77929.2| S-methylmethionine:homocysteine methyltransferase [Escherichia coli
str. K12 substr. W3110]
gi|169887720|gb|ACB01427.1| CP4-6 prophage; S-methylmethionine:homocysteine methyltransferase
[Escherichia coli str. K-12 substr. DH10B]
gi|172051481|emb|CAP07823.1| MmuM [Escherichia coli]
gi|342360742|gb|EGU24917.1| homocysteine methyltransferase [Escherichia coli XH140A]
gi|383101690|gb|AFG39199.1| Homocysteine S-methyltransferase [Escherichia coli P12b]
gi|384377382|gb|EIE35276.1| homocysteine S-methyltransferase [Escherichia coli J53]
gi|386237019|gb|EII68991.1| homocysteine S-methyltransferase [Escherichia coli 2.4168]
gi|430889187|gb|ELC11856.1| homocysteine S-methyltransferase [Escherichia coli KTE10]
gi|431019446|gb|ELD32847.1| homocysteine S-methyltransferase [Escherichia coli KTE212]
gi|431095888|gb|ELE01485.1| homocysteine S-methyltransferase [Escherichia coli KTE49]
gi|431214050|gb|ELF11889.1| homocysteine S-methyltransferase [Escherichia coli KTE119]
gi|431288042|gb|ELF78828.1| homocysteine S-methyltransferase [Escherichia coli KTE42]
gi|431497374|gb|ELH76951.1| homocysteine S-methyltransferase [Escherichia coli KTE211]
gi|431620123|gb|ELI89005.1| homocysteine S-methyltransferase [Escherichia coli KTE139]
gi|431696585|gb|ELJ61746.1| homocysteine S-methyltransferase [Escherichia coli KTE232]
gi|449312016|gb|EMD02314.1| homocysteine methyltransferase [Escherichia coli S17]
Length = 310
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 148/306 (48%), Gaps = 15/306 (4%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG+ +++ D LWS+ L PE E H D+ R + A +
Sbjct: 16 ILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQA 73
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
T +G + EA A +VE +A YLA + + A S+GPYG
Sbjct: 74 TP-------AGFAARGLDEAQSKALIGKSVELARKAREAYLAENPQAGTLLVAGSVGPYG 126
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
L DGSEY G Y S+ A+HRP VEAL+ AG D LA ET+P E AL +LL
Sbjct: 127 AYLADGSEYRGDYHCSVEA--FQAFHRPRVEALLDAGADLLACETLPNFSEIEALAELLT 184
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 504
+P +AW SF+ +D H S G + V LLA Q+ A+G+NC+ + + ++ +
Sbjct: 185 AYPRARAWFSFTLRDSEHLSDGTPLRDVVA--LLAGYPQVVALGINCIALENTTAALQHL 242
Query: 505 KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQWLEEGVNIIGGCCEVTSY 563
+ +VYPN G +D+V W + + L Y+PQW G +IGGCC T
Sbjct: 243 -HGLTVLPLVVYPNSGEHYDAVSKTWHHHGEHCAQLADYLPQWQAAGARLIGGCCRTTPA 301
Query: 564 EIQQMR 569
+I ++
Sbjct: 302 DIAALK 307
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 128/258 (49%), Gaps = 16/258 (6%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ D LWS+ L PE E H D+ RAGA ++ YQA
Sbjct: 16 ILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQA 73
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
G E ++ L+ KSV+L A++ N G + A S+GP
Sbjct: 74 TPAGFAARGLDEAQSKALIGKSVELARKAREA---------YLAENPQAGTLLVAGSVGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y S+ A+HRP VEAL+ AG D LA ET+P E AL +L
Sbjct: 125 YGAYLADGSEYRGDYHCSVEA--FQAFHRPRVEALLDAGADLLACETLPNFSEIEALAEL 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L +P +AW SF+ +D H S G + V LLA Q+ A+G+NC+ + + ++
Sbjct: 183 LTAYPRARAWFSFTLRDSEHLSDGTPLRDVVA--LLAGYPQVVALGINCIALENTTAALQ 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
+ + +VYPN G
Sbjct: 241 HL-HGLTVLPLVVYPNSG 257
>gi|432529669|ref|ZP_19766717.1| homocysteine S-methyltransferase [Escherichia coli KTE233]
gi|431057365|gb|ELD66816.1| homocysteine S-methyltransferase [Escherichia coli KTE233]
Length = 310
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 148/306 (48%), Gaps = 15/306 (4%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG+ +++ D LWS+ L PE E H D+ R + A +
Sbjct: 16 ILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQA 73
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
T +G + EA A +VE +A YLA + + A S+GPYG
Sbjct: 74 TP-------AGFAARGLDEAQSKALIGKSVELARKARETYLAENPQAGTLLVAGSVGPYG 126
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
L DGSEY G Y S+ A+HRP VEAL+ AG D LA ET+P E AL +LL
Sbjct: 127 AYLADGSEYRGDYHCSVEA--FQAFHRPRVEALLDAGADLLACETLPNFSEIEALAELLT 184
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 504
+P +AW SF+ +D H S G + V LLA Q+ A+G+NC+ + + ++ +
Sbjct: 185 AYPRARAWFSFTLRDSEHLSDGTPLRDVVA--LLAGYPQVVALGINCIALENTTAALQHL 242
Query: 505 KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQWLEEGVNIIGGCCEVTSY 563
+ +VYPN G +D+V W + + L Y+PQW G +IGGCC T
Sbjct: 243 -HGLTVLPLVVYPNSGEHYDAVSKTWHHHGEHCAQLADYLPQWQAAGARLIGGCCRTTPA 301
Query: 564 EIQQMR 569
+I ++
Sbjct: 302 DIAALK 307
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 128/258 (49%), Gaps = 16/258 (6%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ D LWS+ L PE E H D+ RAGA ++ YQA
Sbjct: 16 ILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQA 73
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
G E ++ L+ KSV+L A++ N G + A S+GP
Sbjct: 74 TPAGFAARGLDEAQSKALIGKSVELARKARET---------YLAENPQAGTLLVAGSVGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y S+ A+HRP VEAL+ AG D LA ET+P E AL +L
Sbjct: 125 YGAYLADGSEYRGDYHCSVEA--FQAFHRPRVEALLDAGADLLACETLPNFSEIEALAEL 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L +P +AW SF+ +D H S G + V LLA Q+ A+G+NC+ + + ++
Sbjct: 183 LTAYPRARAWFSFTLRDSEHLSDGTPLRDVVA--LLAGYPQVVALGINCIALENTTAALQ 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
+ + +VYPN G
Sbjct: 241 HL-HGLTVLPLVVYPNSG 257
>gi|170589659|ref|XP_001899591.1| probable homocysteine S-methyltransferase [Brugia malayi]
gi|158593804|gb|EDP32399.1| probable homocysteine S-methyltransferase, putative [Brugia malayi]
Length = 315
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 162/317 (51%), Gaps = 20/317 (6%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIG 321
+++LDG F +++ +++ + LWS L P+ ++ H+ FI I T +
Sbjct: 10 IQILDGGFGTEL-EAVGYNIENNSLWSCAALFDNPDLILQVHKRFIEAGSDIILTNSYQA 68
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
T++ S+ + +A N E VR V + S+G
Sbjct: 69 CINTMMSSHGMTKNAAESSLKKLVSLAEQAIN-ECSVREKV------------KIVGSVG 115
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG + DGSEY+G+YVD + + L+ +H L++AG+ +A ET+P+ KEALA++K
Sbjct: 116 PYGVIFNDGSEYNGYYVDEIEQQVLVDYHMQQTIPLLQAGLKVIAYETVPSYKEALAILK 175
Query: 442 LLREFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 500
W+SFSCK+D T+H E +V +A+ I IG+NC P++++ L
Sbjct: 176 AADAIGYSYNFWISFSCKNDKQTNHNEDFCKSVEK--IAHHPSILGIGINCTSPNYITPL 233
Query: 501 VRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEV 560
++ S ++ IVYPN G V++ KW + + + + +W + GV ++GGCC V
Sbjct: 234 LQSASTSVNSLPFIVYPNSGEVYEHSTKKWRIGKCRFPDIEQLIEWKDLGVKVVGGCCRV 293
Query: 561 TSYEIQQMRIMIDEFNT 577
+ +I+++ I++ + N+
Sbjct: 294 GAEKIKELSILVAKLNS 310
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 143/261 (54%), Gaps = 18/261 (6%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K+++LDG F +++ +++ + LWS L P+ ++ H+ FI AG+DII ++ YQ
Sbjct: 9 KIQILDGGFGTEL-EAVGYNIENNSLWSCAALFDNPDLILQVHKRFIEAGSDIILTNSYQ 67
Query: 66 ANVDNL-TKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
A ++ + + G ++ A L K V L A ++ + + ++ S+
Sbjct: 68 ACINTMMSSHGMTKNAAESSLKKLVSLAEQAINECS-------------VREKVKIVGSV 114
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG + DGSEY+G+YVD + + L+ +H L++AG+ +A ET+P+ KEALA++
Sbjct: 115 GPYGVIFNDGSEYNGYYVDEIEQQVLVDYHMQQTIPLLQAGLKVIAYETVPSYKEALAIL 174
Query: 185 KLLREFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
K W+SFSCK+D T+H E +V +A+ I IG+NC P++++
Sbjct: 175 KAADAIGYSYNFWISFSCKNDKQTNHNEDFCKSVEK--IAHHPSILGIGINCTSPNYITP 232
Query: 244 LVRCIKQSHPTVQTIVYPNKG 264
L++ S ++ IVYPN G
Sbjct: 233 LLQSASTSVNSLPFIVYPNSG 253
>gi|238927222|ref|ZP_04658982.1| homocysteine S-methyltransferase [Selenomonas flueggei ATCC 43531]
gi|238885004|gb|EEQ48642.1| homocysteine S-methyltransferase [Selenomonas flueggei ATCC 43531]
Length = 349
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 135/259 (52%), Gaps = 16/259 (6%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG+ +++ D PLWS+ L P+ + H D++RAGAD++ S+ YQA
Sbjct: 30 VLVLDGALATELEARGFSVDD--PLWSAKALFERPDLVRDIHLDYLRAGADVLTSASYQA 87
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
VD + G++ +EA +LL +SV+L A+ T AAS+GP
Sbjct: 88 TVDGFMQRGFTAEEAAELLRRSVRLAQEARGLYRAERSTG--------TAVPLVAASVGP 139
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y + E L A+H + L A D LA ET+P EA A+V+
Sbjct: 140 YGAYLADGSEYRGDY--DVEEDALTAFHAQRLRILASAAPDLLACETLPCLHEACAIVRS 197
Query: 187 LR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
LR E A+ SFSC+D H S G I+ L A P + AIGVNC P +VS L+
Sbjct: 198 LRAEGIRIPAYFSFSCRDGAHISDGTEIAE-CARVLDAVP-EAAAIGVNCTAPQYVSGLI 255
Query: 246 RCIKQSHPTVQTIVYPNKG 264
R I+Q +VYPN G
Sbjct: 256 RMIRQETDK-PIVVYPNSG 273
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 141/306 (46%), Gaps = 26/306 (8%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V +LDG+ +++ D PLWS+ L P+ + H D++R + S
Sbjct: 30 VLVLDGALATELEARGFSVDD--PLWSAKALFERPDLVRDIHLDYLRAGADVLTSASYQA 87
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA-----AS 379
TV DG G + E + VR + L + S+ TA AS
Sbjct: 88 TV--DGFMQRGFTAEEAAEL---------LRRSVRLAQEARGLYRAERSTGTAVPLVAAS 136
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
+GPYG L DGSEY G Y + E L A+H + L A D LA ET+P EA A+
Sbjct: 137 VGPYGAYLADGSEYRGDY--DVEEDALTAFHAQRLRILASAAPDLLACETLPCLHEACAI 194
Query: 440 VKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
V+ LR E A+ SFSC+D H S G I+ L A P + AIGVNC P +VS
Sbjct: 195 VRSLRAEGIRIPAYFSFSCRDGAHISDGTEIAE-CARVLDAVP-EAAAIGVNCTAPQYVS 252
Query: 499 TLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
L+R I+Q +VYPN G +D+ W +++ ++ G IIGGCC
Sbjct: 253 GLIRMIRQETDK-PIVVYPNSGEYYDAAARVWRGAAEDFGARSR--EYAAAGARIIGGCC 309
Query: 559 EVTSYE 564
T ++
Sbjct: 310 RTTPHD 315
>gi|77406718|ref|ZP_00783757.1| homocysteine S-methyltransferase [Streptococcus agalactiae H36B]
gi|77414067|ref|ZP_00790236.1| homocysteine S-methyltransferase [Streptococcus agalactiae 515]
gi|77159865|gb|EAO71007.1| homocysteine S-methyltransferase [Streptococcus agalactiae 515]
gi|77174681|gb|EAO77511.1| homocysteine S-methyltransferase [Streptococcus agalactiae H36B]
Length = 351
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/283 (36%), Positives = 160/283 (56%), Gaps = 21/283 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K +L G+ +++ DV G LWS YL +P A H D+IRAGADI+ +S YQ
Sbjct: 49 KALILHGALGTELESRGC-DVSG-KLWSDKYLIEDPAAIQTIHEDYIRAGADIVTTSTYQ 106
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAAS 123
A + L ++G SE +A DL+ +VQL + +++ ++ T + + + L++G
Sbjct: 107 ATLQGLAQVGVSESQAEDLIRLTVQLAKAVREQVWKSLTKEEKSERIYPLISG------D 160
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPY L DGSEY+G Y + + L +HR +E L+ GVD LALETIP +EA AL
Sbjct: 161 VGPYAAFLADGSEYTGLY--DIYKEGLKNFHRHRIELLLDEGVDLLALETIPNAQEAEAL 218
Query: 184 VKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++LL E FP +A++SF+ +D S G + + + + +P Q+ A+G+NC PS V+
Sbjct: 219 IELLVEDFPQVEAYMSFTSQDGKTISDGSAV-AGLAKAIDVSP-QVVALGINCSSPSLVA 276
Query: 243 TLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTS-QVSR---HTI 281
++ I + + YPN G ++ DG+ S Q SR HT+
Sbjct: 277 DFLQAIAE-QTDKPLVTYPNSG-EIYDGASQSWQSSRDHSHTL 317
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 144/292 (49%), Gaps = 18/292 (6%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMT 342
DV G LWS YL +P A H D+IR + + Y L+ ++ V
Sbjct: 67 DVSG-KLWSDKYLIEDPAAIQTIHEDYIRAGADIVTT-STYQATLQGLAQVG---VSESQ 121
Query: 343 EADLIAWHRPNVEALVRAGVDYLALIKPSISSQT----AASIGPYGTVLRDGSEYSGHYV 398
DLI +A VR V + +L K S + + +GPY L DGSEY+G Y
Sbjct: 122 AEDLIRLTVQLAKA-VREQV-WKSLTKEEKSERIYPLISGDVGPYAAFLADGSEYTGLY- 178
Query: 399 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE-FPGQKAWLSFSC 457
+ + L +HR +E L+ GVD LALETIP +EA AL++LL E FP +A++SF+
Sbjct: 179 -DIYKEGLKNFHRHRIELLLDEGVDLLALETIPNAQEAEALIELLVEDFPQVEAYMSFTS 237
Query: 458 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 517
+D S G + + + + +P Q+ A+G+NC PS V+ ++ I + + YP
Sbjct: 238 QDGKTISDGSAV-AGLAKAIDVSP-QVVALGINCSSPSLVADFLQAIAE-QTDKPLVTYP 294
Query: 518 NKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
N G ++D W + D +++L W + G ++GGCC +I +
Sbjct: 295 NSGEIYDGASQSWQSSRDHSHTLLENTSDWQKLGAQVVGGCCRTRPADIADL 346
>gi|304437169|ref|ZP_07397130.1| homocysteine S-methyltransferase [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304369831|gb|EFM23495.1| homocysteine S-methyltransferase [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 332
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 137/259 (52%), Gaps = 16/259 (6%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG+ +++ D PLWS+ L P E H D++RAGAD++ S+ YQA
Sbjct: 13 VLVLDGALATELEARGFSVDD--PLWSAKALFERPNLVREIHLDYLRAGADVLTSASYQA 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
V + G++ ++A +LL +SV+L A+D + + L+ AAS+GP
Sbjct: 71 TVAGFMRRGFTAEKAAELLRRSVRLAQEARDLYRA--ECGGDAAVPLV------AASVGP 122
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y + E L A+H + L A D LA ET+P EA A+V+
Sbjct: 123 YGAYLADGSEYRGDY--DVEEDTLTAFHAQRLRILASAAPDLLACETLPCLHEACAIVRA 180
Query: 187 LR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
LR E A+ SFSC+D H S G I+ L A P + AIGVNC P +VS L+
Sbjct: 181 LRAEGIRIPAYFSFSCRDGAHISDGTEIAE-CARVLDAVP-EAAAIGVNCTAPQYVSGLI 238
Query: 246 RCIKQSHPTVQTIVYPNKG 264
R I+Q +VYPN G
Sbjct: 239 RMIRQETDK-PIVVYPNSG 256
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 137/306 (44%), Gaps = 18/306 (5%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V +LDG+ +++ D PLWS+ L P E H D++R + S
Sbjct: 13 VLVLDGALATELEARGFSVDD--PLWSAKALFERPNLVREIHLDYLRAGADVLTSASYQA 70
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSIS-SQTAASIGPY 383
TV +G T R +V A Y A + AAS+GPY
Sbjct: 71 TV-------AGFMRRGFTAEKAAELLRRSVRLAQEARDLYRAECGGDAAVPLVAASVGPY 123
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L DGSEY G Y + E L A+H + L A D LA ET+P EA A+V+ L
Sbjct: 124 GAYLADGSEYRGDY--DVEEDTLTAFHAQRLRILASAAPDLLACETLPCLHEACAIVRAL 181
Query: 444 R-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
R E A+ SFSC+D H S G I+ L A P + AIGVNC P +VS L+R
Sbjct: 182 RAEGIRIPAYFSFSCRDGAHISDGTEIAE-CARVLDAVP-EAAAIGVNCTAPQYVSGLIR 239
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTS 562
I+Q +VYPN G +D+ W +++ ++ G IIGGCC T
Sbjct: 240 MIRQETDK-PIVVYPNSGEYYDAAARVWRGAAEDFGARSR--EYAAAGARIIGGCCRTTP 296
Query: 563 YEIQQM 568
++ +
Sbjct: 297 HDTASI 302
>gi|449458464|ref|XP_004146967.1| PREDICTED: homocysteine S-methyltransferase 2-like [Cucumis
sativus]
gi|449518264|ref|XP_004166162.1| PREDICTED: homocysteine S-methyltransferase 2-like [Cucumis
sativus]
Length = 338
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 140/269 (52%), Gaps = 26/269 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG +++ RH D PLWS+ L T P H D++ AGADII ++ YQA +
Sbjct: 26 IVDGGLATELERHGADLND--PLWSAKCLLTSPHLIHRVHMDYLEAGADIIITASYQATI 83
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK----DKEN-----QTPDINLNKTFNLLTGHIE 119
GY+ E+ LL KSV++ +A+ D+ N ++PD + K +L
Sbjct: 84 QGFESKGYTTDESESLLRKSVEIACTARVNYYDRCNTSTPDESPDGRIFKKRQILI---- 139
Query: 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 179
AAS+G YG L DGSEYSG Y DSMT L +HR V+ L +G D +A ETIP + E
Sbjct: 140 -AASVGSYGAYLADGSEYSGIYGDSMTLEALKEFHRKRVKVLAESGADLIAFETIPNKLE 198
Query: 180 ALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 235
A A +LL E P AW +F+ KD H G+ S V+ + + A+G+NC
Sbjct: 199 AKAYAELLEEENISLP---AWFAFNSKDGIHVVSGDSYSECVS--IAESCRNTVAVGINC 253
Query: 236 VRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
P + L+ IK+ T ++YPN G
Sbjct: 254 TPPRFIHGLISSIKKV-TTKPIVIYPNSG 281
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 155/326 (47%), Gaps = 38/326 (11%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G ++DG +++ RH D PLWS+ L T P H D++ + +
Sbjct: 23 GTAIVDGGLATELERHGADLND--PLWSAKCLLTSPHLIHRVHMDYLEAGADIIITASYQ 80
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT------- 376
T+ G E G+ D +E+ L R +VE A V+Y S ++
Sbjct: 81 ATI--QGFESKGYTTDE-SESLL----RKSVEIACTARVNYYDRCNTSTPDESPDGRIFK 133
Query: 377 ------AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI 430
AAS+G YG L DGSEYSG Y DSMT L +HR V+ L +G D +A ETI
Sbjct: 134 KRQILIAASVGSYGAYLADGSEYSGIYGDSMTLEALKEFHRKRVKVLAESGADLIAFETI 193
Query: 431 PAEKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQA 486
P + EA A +LL E P AW +F+ KD H G+ S V+ + + A
Sbjct: 194 PNKLEAKAYAELLEEENISLP---AWFAFNSKDGIHVVSGDSYSECVS--IAESCRNTVA 248
Query: 487 IGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLD----TEDEYSILHY 542
+G+NC P + L+ IK+ T ++YPN G +D+ +W+ ++D++ + Y
Sbjct: 249 VGINCTPPRFIHGLISSIKKV-TTKPIVIYPNSGESYDADLKEWVQNTGVSDDDF--VSY 305
Query: 543 VPQWLEEGVNIIGGCCEVTSYEIQQM 568
V +W E G +I GGCC T I+ +
Sbjct: 306 VNKWCETGASIFGGCCRTTPNTIRGI 331
>gi|320530118|ref|ZP_08031188.1| homocysteine S-methyltransferase [Selenomonas artemidis F0399]
gi|320137551|gb|EFW29463.1| homocysteine S-methyltransferase [Selenomonas artemidis F0399]
Length = 333
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 142/280 (50%), Gaps = 28/280 (10%)
Query: 4 ICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+ + +LDG+F +++ D LWS+ + P+ + H D++RAGADI+ S+
Sbjct: 11 VSNILVLDGAFATELEARGFSVNDA--LWSAKAIFERPDLVRDVHLDYLRAGADIVTSAS 68
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIE- 119
YQA V+ K G++E++A L+ +SV+L A+D E+ + + ++ F G E
Sbjct: 69 YQATVEGFVKKGFTEEQAAALIVRSVELAREARDIYCLESLADEYHAHEEFT--RGSCER 126
Query: 120 --------------TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG 165
AAS+GPYG L DGSEY G Y + E L A+H + L
Sbjct: 127 CAPAQRRSLGEEPLVAASVGPYGAYLADGSEYRGDY--DVDEDALTAFHADRLALLAEGQ 184
Query: 166 VDYLALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLAN 224
D LA ET+P EA A+V+ LRE AW SFSC+D H S G I+ LA
Sbjct: 185 PDLLACETLPCLPEARAIVRALREKKIHIPAWFSFSCRDGAHISDGTPIADCAR--FLAG 242
Query: 225 PDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+ AIGVNC P ++ L+R I++ +VYPN G
Sbjct: 243 VPEAAAIGVNCTAPQYIEDLIRAIRRETDK-PVVVYPNSG 281
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 141/328 (42%), Gaps = 44/328 (13%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ +LDG+F +++ D LWS+ + P+ + H D++R + S
Sbjct: 14 ILVLDGAFATELEARGFSVNDA--LWSAKAIFERPDLVRDVHLDYLRAGADIVTSASYQA 71
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL----------------- 367
TV G TE A +VE L R D L
Sbjct: 72 TV-------EGFVKKGFTEEQAAALIVRSVE-LAREARDIYCLESLADEYHAHEEFTRGS 123
Query: 368 -------IKPSISSQ--TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV 418
+ S+ + AAS+GPYG L DGSEY G Y + E L A+H + L
Sbjct: 124 CERCAPAQRRSLGEEPLVAASVGPYGAYLADGSEYRGDY--DVDEDALTAFHADRLALLA 181
Query: 419 RAGVDYLALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCL 477
D LA ET+P EA A+V+ LRE AW SFSC+D H S G I+
Sbjct: 182 EGQPDLLACETLPCLPEARAIVRALREKKIHIPAWFSFSCRDGAHISDGTPIADCAR--F 239
Query: 478 LANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY 537
LA + AIGVNC P ++ L+R I++ +VYPN G + + W T +++
Sbjct: 240 LAGVPEAAAIGVNCTAPQYIEDLIRAIRRETDK-PVVVYPNSGEDYSASDKSWHGTAEDF 298
Query: 538 SILHYVPQWLEEGVNIIGGCCEVTSYEI 565
+ +W + G IIGGCC + +I
Sbjct: 299 AA--GARRWRDAGARIIGGCCRTSPRDI 324
>gi|330920354|ref|XP_003298974.1| hypothetical protein PTT_09865 [Pyrenophora teres f. teres 0-1]
gi|311327538|gb|EFQ92923.1| hypothetical protein PTT_09865 [Pyrenophora teres f. teres 0-1]
Length = 319
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 145/263 (55%), Gaps = 25/263 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ + + D+ G LWS+ L +P +TH D+ RAGA++ ++ YQA++
Sbjct: 21 ILDGALATYLETLG-ADISG-ALWSASILLDQPSLIKQTHLDYFRAGANVAITASYQASI 78
Query: 69 DNLTK-LGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIG 125
L K L SE+EA D++ KSV+L A+D T ++ N+ F A S+G
Sbjct: 79 PGLVKHLQLSEREAKDVVKKSVELAQEARDHYITESTAEVG-NQLF--------IAGSVG 129
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY G Y S+ ++ +HR ++ALV AGVD LA ETIP++ E AL+
Sbjct: 130 PYGAFLADGSEYRGDY--SIPREEMKDFHRGRIQALVEAGVDILACETIPSKAETEALLD 187
Query: 186 LL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
LL EF +AW F+ +D H S G S A + L N Q+ A+G NCV P +S
Sbjct: 188 LLITEFASTEAWFGFTLRDSAHISDG--TSLADIAALFENVQQVVALGFNCV-PDDLS-- 242
Query: 245 VRCIKQSHPTVQT---IVYPNKG 264
V +K P V+ +VYPN G
Sbjct: 243 VAALKTLKPLVKRGTLVVYPNSG 265
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 149/309 (48%), Gaps = 22/309 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ + + D+ G LWS+ L +P +TH D+ R A + ++
Sbjct: 21 ILDGALATYLETLG-ADISG-ALWSASILLDQPSLIKQTHLDYFRAGANVAITASYQASI 78
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--TAASIGPYG 384
H S EA + + +VE A Y+ + +Q A S+GPYG
Sbjct: 79 ----PGLVKHLQLSEREAKDVV--KKSVELAQEARDHYITESTAEVGNQLFIAGSVGPYG 132
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL- 443
L DGSEY G Y S+ ++ +HR ++ALV AGVD LA ETIP++ E AL+ LL
Sbjct: 133 AFLADGSEYRGDY--SIPREEMKDFHRGRIQALVEAGVDILACETIPSKAETEALLDLLI 190
Query: 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
EF +AW F+ +D H S G S A + L N Q+ A+G NCV P +S V
Sbjct: 191 TEFASTEAWFGFTLRDSAHISDG--TSLADIAALFENVQQVVALGFNCV-PDDLS--VAA 245
Query: 504 IKQSHPTVQT---IVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQWLEEGVNIIGGCCE 559
+K P V+ +VYPN G W++ +W E S L +W + G +IGGCC
Sbjct: 246 LKTLKPLVKRGTLVVYPNSGEQWNAQAREWEGKRTEGSSLAEKTREWRDAGAGLIGGCCR 305
Query: 560 VTSYEIQQM 568
T +I M
Sbjct: 306 TTPEDIGVM 314
>gi|422344868|ref|ZP_16425792.1| hypothetical protein HMPREF9432_01852 [Selenomonas noxia F0398]
gi|355376322|gb|EHG23576.1| hypothetical protein HMPREF9432_01852 [Selenomonas noxia F0398]
Length = 311
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 137/264 (51%), Gaps = 26/264 (9%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG+F +++ D LWS+ L P+ + H D++RAGAD++ S+ YQA
Sbjct: 13 VIVLDGAFATELEARGFSVNDA--LWSAKALFERPDLVRDVHLDYLRAGADVVTSASYQA 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD-----KENQTPDINLNKTFNLLTGHIETA 121
+ K G++ +EA LL KSV+L A+D + + P+ + A
Sbjct: 71 TAEGFQKRGFTAEEAEALLQKSVRLAQEARDMYMAERPAEEPEPLV-------------A 117
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
ASIGPYG L DGSEY G Y E L A+H + L A D LA ET+P EA
Sbjct: 118 ASIGPYGAYLADGSEYRGDY--DADEDVLTAFHAERLAVLAAARPDLLACETLPCLVEAR 175
Query: 182 ALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 240
ALV+ LRE + AW SFSC+D H S G I A + L + + AIG+NC P +
Sbjct: 176 ALVRALREKEIRIPAWFSFSCRDAAHISDGTPI--AACAHWLNSVPEAAAIGLNCTSPQY 233
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKG 264
V L+R I++ +VYPN G
Sbjct: 234 VEELIRTIRRETEK-PVVVYPNSG 256
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 142/309 (45%), Gaps = 20/309 (6%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
+ V +LDG+F +++ D LWS+ L P+ + H D++R + S
Sbjct: 11 QDVIVLDGAFATELEARGFSVNDA--LWSAKALFERPDLVRDVHLDYLRAGADVVTSASY 68
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--TAASI 380
T +G + G + EA L R L + D +P+ + AASI
Sbjct: 69 QATA--EGFQKRG-FTAEEAEALLQKSVR-----LAQEARDMYMAERPAEEPEPLVAASI 120
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GPYG L DGSEY G Y E L A+H + L A D LA ET+P EA ALV
Sbjct: 121 GPYGAYLADGSEYRGDY--DADEDVLTAFHAERLAVLAAARPDLLACETLPCLVEARALV 178
Query: 441 KLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
+ LRE + AW SFSC+D H S G I A + L + + AIG+NC P +V
Sbjct: 179 RALREKEIRIPAWFSFSCRDAAHISDGTPI--AACAHWLNSVPEAAAIGLNCTSPQYVEE 236
Query: 500 LVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
L+R I++ +VYPN G +D+ W ++++ + G +IGGCC
Sbjct: 237 LIRTIRRETEK-PVVVYPNSGESYDASDKTWHGAAEDFAAATRRWR--AAGARLIGGCCR 293
Query: 560 VTSYEIQQM 568
+I +
Sbjct: 294 TAPRDIAAI 302
>gi|440288844|ref|YP_007341609.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Enterobacteriaceae
bacterium strain FGI 57]
gi|440048366|gb|AGB79424.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Enterobacteriaceae
bacterium strain FGI 57]
Length = 310
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 152/323 (47%), Gaps = 17/323 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ QS+P T + + LLDG+ +++ D LWS+ L P + H
Sbjct: 1 MSQSNPL--TAILDAEPFVLLDGAMATELEGRGCNLADS--LWSAKVLMENPTLIRDVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R A + T +G + EA A +V A YLA
Sbjct: 57 DYFRAGARVAITASYQATP-------AGFAARGLDEAQSRALIARSVALAQEARELYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G Y S E A+HRP VEAL+ AG D LA
Sbjct: 110 NPQAGTLLVAGSVGPYGAYLADGSEYRGDYQRSAEE--FQAFHRPRVEALLEAGADLLAC 167
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P+ E AL +LL +P +AW SF+ +D H S G + + + LA Q+ A+
Sbjct: 168 ETLPSFAEISALAELLTAYPTARAWFSFTLRDAQHLSDGTPLCDVIAT--LARYPQVIAV 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQW 546
G+NC+ + + + C S + +VYPN G +D+V W + L H++PQW
Sbjct: 226 GINCIALENTNDAL-CHLHSLTPLPLVVYPNSGEHYDAVSKTWHHHGEACDTLAHHLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQMR 569
G +IGGCC T +I ++
Sbjct: 285 QAAGARLIGGCCRTTPADIAALK 307
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 128/256 (50%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L P + H D+ RAGA + ++ YQA
Sbjct: 18 LLDGAMATELEGRGCNLADS--LWSAKVLMENPTLIRDVHLDYFRAGARVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G E ++ L+ +SV L A++ L N G + A S+GPYG
Sbjct: 76 AGFAARGLDEAQSRALIARSVALAQEARE---------LYLAENPQAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y S E A+HRP VEAL+ AG D LA ET+P+ E AL +LL
Sbjct: 127 AYLADGSEYRGDYQRSAEE--FQAFHRPRVEALLEAGADLLACETLPSFAEISALAELLT 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+P +AW SF+ +D H S G + + + LA Q+ A+G+NC+ + + + C
Sbjct: 185 AYPTARAWFSFTLRDAQHLSDGTPLCDVIAT--LARYPQVIAVGINCIALENTNDAL-CH 241
Query: 249 KQSHPTVQTIVYPNKG 264
S + +VYPN G
Sbjct: 242 LHSLTPLPLVVYPNSG 257
>gi|449455288|ref|XP_004145385.1| PREDICTED: homocysteine S-methyltransferase 3-like [Cucumis
sativus]
gi|449472065|ref|XP_004153485.1| PREDICTED: homocysteine S-methyltransferase 3-like [Cucumis
sativus]
Length = 338
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 101/262 (38%), Positives = 139/262 (53%), Gaps = 13/262 (4%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG F +++ R D PLWS+ L T P H D++ AGA+II ++ YQA +
Sbjct: 25 VLDGGFATELERLGADLND--PLWSAKCLLTSPHLVRRVHLDYLDAGANIISTASYQATI 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKD--KENQTPDI-NLNKTFNLLTGHIETAASIG 125
G+S E+ +LL KSVQ+ A+D E T D + +T I AASIG
Sbjct: 83 QGFEAKGFSRDESENLLRKSVQIAIEARDIYLERCTKDSWDFTETGAGSRRPILIAASIG 142
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
YG L DGSEYSG Y DS+T L +HR V+ L AG D +A ETIP + EA A +
Sbjct: 143 SYGAYLADGSEYSGEYGDSVTLETLKDFHRRRVQILANAGADLIAFETIPNKLEAQAYAE 202
Query: 186 LLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
LL E + AW SF+ KD + G+ IS + + Q+ A+G+NC P ++ L
Sbjct: 203 LLDEEGIEIPAWFSFNSKDGINVVSGDSISDCAS--IADASKQVVAVGINCTPPRYIHGL 260
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ I++ P V VYPN G
Sbjct: 261 ILSIREVTDKPIV---VYPNSG 279
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 151/318 (47%), Gaps = 23/318 (7%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G +LDG F +++ R D PLWS+ L T P H D++ ++
Sbjct: 22 GYGVLDGGFATELERLGADLND--PLWSAKCLLTSPHLVRRVHLDYLDAGANIISTASYQ 79
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA----LVRAGVDYLALIKPSISSQ---- 375
T+ G E G D +E L + +EA L R D + S+
Sbjct: 80 ATI--QGFEAKGFSRDE-SENLLRKSVQIAIEARDIYLERCTKDSWDFTETGAGSRRPIL 136
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
AASIG YG L DGSEYSG Y DS+T L +HR V+ L AG D +A ETIP + E
Sbjct: 137 IAASIGSYGAYLADGSEYSGEYGDSVTLETLKDFHRRRVQILANAGADLIAFETIPNKLE 196
Query: 436 ALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
A A +LL E + AW SF+ KD + G+ IS + + Q+ A+G+NC P
Sbjct: 197 AQAYAELLDEEGIEIPAWFSFNSKDGINVVSGDSISDCAS--IADASKQVVAVGINCTPP 254
Query: 495 SHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYS--ILHYVPQWLEEG 550
++ L+ I++ P V VYPN G +D V +WL ++ + YV +W E G
Sbjct: 255 RYIHGLILSIREVTDKPIV---VYPNSGESYDGVTKRWLKSDGMIGEDFVSYVRKWKEAG 311
Query: 551 VNIIGGCCEVTSYEIQQM 568
++ GGCC T I+ +
Sbjct: 312 ASLFGGCCRTTPNTIRGI 329
>gi|260596729|ref|YP_003209300.1| homocysteine methyltransferase [Cronobacter turicensis z3032]
gi|260215906|emb|CBA28467.1| Homocysteine S-methyltransferase [Cronobacter turicensis z3032]
Length = 310
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 149/307 (48%), Gaps = 23/307 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D LWS+ L +PE H D+ R + A + T
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 327 LRDGSEYSGHYVDSMTEADLIA----WHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
+ ++ +D LIA R EA + D L+ A S+GP
Sbjct: 76 ----AGFAARGLDEAQSRALIARSVELARQAREAFYKEQPDAGPLL-------VAGSVGP 124
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY G Y +++ A+ +HRP VEAL+ AGVD LA ET+P+ EA AL L
Sbjct: 125 YGAYLADGSEYRGDY--ALSAAEFADFHRPRVEALLAAGVDLLACETLPSLSEARALAVL 182
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
L +P +AWL+F+ +D H S G ++ + LA QI A+G+NCV + +
Sbjct: 183 LESYPQARAWLTFTLRDSGHISDGTPLADVAAA--LAPYPQIVALGINCVALEKTTAALA 240
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEGVNIIGGCCEVT 561
+ + + +VYPN G +D+V W D ++ HY+ +W G +IGGCC T
Sbjct: 241 HLHDAT-RLPLVVYPNSGEQYDAVSKTWRHDGHACQTLAHYLDEWRAAGAALIGGCCRTT 299
Query: 562 SYEIQQM 568
+I +
Sbjct: 300 PADIAAL 306
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 141/280 (50%), Gaps = 26/280 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L +PE H D+ RAGA ++ YQA
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK-ENQTPDINLNKTFNLLTGHIETAASIGPY 127
G E ++ L+ +SV+L A++ + PD G + A S+GPY
Sbjct: 76 AGFAARGLDEAQSRALIARSVELARQAREAFYKEQPD----------AGPLLVAGSVGPY 125
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y +++ A+ +HRP VEAL+ AGVD LA ET+P+ EA AL LL
Sbjct: 126 GAYLADGSEYRGDY--ALSAAEFADFHRPRVEALLAAGVDLLACETLPSLSEARALAVLL 183
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
+P +AWL+F+ +D H S G ++ + LA QI A+G+NCV + +
Sbjct: 184 ESYPQARAWLTFTLRDSGHISDGTPLADVAAA--LAPYPQIVALGINCVALEKTTAALAH 241
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGH 287
+ + + +VYPN G + S+ RH DGH
Sbjct: 242 LHDAT-RLPLVVYPNSGEQY---DAVSKTWRH-----DGH 272
>gi|283834324|ref|ZP_06354065.1| homocysteine S-methyltransferase [Citrobacter youngae ATCC 29220]
gi|291069856|gb|EFE07965.1| homocysteine S-methyltransferase [Citrobacter youngae ATCC 29220]
Length = 310
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 146/303 (48%), Gaps = 15/303 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
LLDG+ +++ D LWS+ L P+ E H D+ R + A + T
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVENPQLIREVHLDYYRAGAQCAITASYQATP 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+G + EA A +VE +A YLA + + A S+GPYG
Sbjct: 76 -------AGLAARGLDEAQSKALIGKSVELARKAREAYLAENPQAGTLLVAGSVGPYGAY 128
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y S+ L A+HRP VEAL+ AG D LA ET+P E AL +LL +
Sbjct: 129 LADGSEYRGDYQRSV--GALQAFHRPRVEALLDAGADLLACETLPNFTEIGALAELLTAY 186
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P +AW SF+ +D H S G + V LLA Q+ A+G+NC+ + ++ +
Sbjct: 187 PRARAWFSFTLRDSEHLSDGTPLRDVVA--LLAGYPQVVALGINCIALEKTTAALQHL-H 243
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQWLEEGVNIIGGCCEVTSYEI 565
+ +VYPN G +D+ W + + L Y+PQW G +IGGCC T +I
Sbjct: 244 GLTALPLVVYPNSGEQYDAASKTWHHHGEHCAHLADYLPQWRAAGARLIGGCCRTTPKDI 303
Query: 566 QQM 568
++
Sbjct: 304 AEL 306
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 140/302 (46%), Gaps = 17/302 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L P+ E H D+ RAGA ++ YQA
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVENPQLIREVHLDYYRAGAQCAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
L G E ++ L+ KSV+L A++ N G + A S+GPYG
Sbjct: 76 AGLAARGLDEAQSKALIGKSVELARKAREA---------YLAENPQAGTLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y S+ L A+HRP VEAL+ AG D LA ET+P E AL +LL
Sbjct: 127 AYLADGSEYRGDYQRSV--GALQAFHRPRVEALLDAGADLLACETLPNFTEIGALAELLT 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+P +AW SF+ +D H S G + V LLA Q+ A+G+NC+ + ++ +
Sbjct: 185 AYPRARAWFSFTLRDSEHLSDGTPLRDVVA--LLAGYPQVVALGINCIALEKTTAALQHL 242
Query: 249 KQSHPTVQTIVYPNKGVKLLDGSFT-SQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ +VYPN G + S T H D P W + C T +
Sbjct: 243 -HGLTALPLVVYPNSGEQYDAASKTWHHHGEHCAHLADYLPQWRAAGARLIGGCCRTTPK 301
Query: 308 DF 309
D
Sbjct: 302 DI 303
>gi|15229396|ref|NP_191884.1| homocysteine S-methyltransferase 2 [Arabidopsis thaliana]
gi|50400668|sp|Q9M1W4.1|HMT2_ARATH RecName: Full=Homocysteine S-methyltransferase 2; AltName:
Full=S-methylmethionine:homocysteine methyltransferase
2; Short=AtHMT-2; Short=SMM:Hcy S-methyltransferase 2
gi|16226446|gb|AAL16170.1|AF428402_1 AT3g63250/F16M2_100 [Arabidopsis thaliana]
gi|7523407|emb|CAB86426.1| homocysteine S-methyltransferase AtHMT-2 [Arabidopsis thaliana]
gi|33589736|gb|AAQ22634.1| At3g63250/F16M2_100 [Arabidopsis thaliana]
gi|110743464|dbj|BAE99618.1| homocysteine S-methyltransferase AtHMT-2 [Arabidopsis thaliana]
gi|332646935|gb|AEE80456.1| homocysteine S-methyltransferase 2 [Arabidopsis thaliana]
Length = 333
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 137/263 (52%), Gaps = 17/263 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG ++ RH D PLWS+ L T P H D++ AGADII S+ YQA +
Sbjct: 21 VIDGGLATEFERHGADLND--PLWSAKCLVTSPHLIHTVHLDYLEAGADIISSASYQATI 78
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH-IETAASIGPY 127
G+S +E+ LL KSV++ A++ + + +L I AAS+G Y
Sbjct: 79 QGFEAKGFSREESESLLKKSVEIATEARNSYYDKCGTSSSMDDKILKKRPILVAASVGSY 138
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEYSG Y DS+T L +HR ++ L +G D +A ETIP + EA A LL
Sbjct: 139 GAYLADGSEYSGIYGDSITLEKLKDFHRRRLQVLAESGADLIAFETIPNKIEAQAFADLL 198
Query: 188 RE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
E PG W SF+ KD + G+ I ++ + N +++ A+G+NC P +
Sbjct: 199 EEGDVKIPG---WFSFNSKDGVNVVSGDSIKECIS--IAENCEKVVAVGINCTPPRFIEG 253
Query: 244 LVRCIKQ--SHPTVQTIVYPNKG 264
LV I++ S P +VYPN G
Sbjct: 254 LVLEIEKVTSKP---ILVYPNSG 273
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 159/337 (47%), Gaps = 35/337 (10%)
Query: 250 QSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDF 309
S +++ + G ++DG ++ RH D PLWS+ L T P H D+
Sbjct: 4 NSFNSMKDFLKQTGGYAVIDGGLATEFERHGADLND--PLWSAKCLVTSPHLIHTVHLDY 61
Query: 310 IRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIK 369
+ + +S T+ G E G S E++ + + +VE A Y
Sbjct: 62 LEAGADIISSASYQATI--QGFEAKGF---SREESESLL--KKSVEIATEARNSYYDKCG 114
Query: 370 PSISSQ----------TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR 419
S S AAS+G YG L DGSEYSG Y DS+T L +HR ++ L
Sbjct: 115 TSSSMDDKILKKRPILVAASVGSYGAYLADGSEYSGIYGDSITLEKLKDFHRRRLQVLAE 174
Query: 420 AGVDYLALETIPAEKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTS 475
+G D +A ETIP + EA A LL E PG W SF+ KD + G+ I ++
Sbjct: 175 SGADLIAFETIPNKIEAQAFADLLEEGDVKIPG---WFSFNSKDGVNVVSGDSIKECIS- 230
Query: 476 CLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDT 533
+ N +++ A+G+NC P + LV I++ S P +VYPN G +D+ +W++
Sbjct: 231 -IAENCEKVVAVGINCTPPRFIEGLVLEIEKVTSKP---ILVYPNSGESYDADRKEWVEN 286
Query: 534 E--DEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+ + YV +W++ GV+++GGCC T I+ +
Sbjct: 287 TGVGDEDFVSYVEKWMDAGVSLLGGCCRTTPTTIRAI 323
>gi|18403505|ref|NP_566715.1| homocysteine S-methyltransferase 3 [Arabidopsis thaliana]
gi|50400551|sp|Q8LAX0.2|HMT3_ARATH RecName: Full=Homocysteine S-methyltransferase 3; AltName:
Full=S-methylmethionine:homocysteine methyltransferase
3; Short=AtHMT-3; Short=SMM:Hcy S-methyltransferase 3
gi|9966515|gb|AAG10301.1|AF297394_1 homocysteine S-methyltransferase [Arabidopsis thaliana]
gi|9279692|dbj|BAB01249.1| cysteine methyltransferase [Arabidopsis thaliana]
gi|26451099|dbj|BAC42654.1| putative selenocysteine methyltransferase [Arabidopsis thaliana]
gi|28950917|gb|AAO63382.1| At3g22740 [Arabidopsis thaliana]
gi|332643151|gb|AEE76672.1| homocysteine S-methyltransferase 3 [Arabidopsis thaliana]
Length = 347
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 163/336 (48%), Gaps = 46/336 (13%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDF-------------- 309
G ++DG F +++ RH D++ PLWS+ L T P + H D+
Sbjct: 22 GYAVVDGGFATELQRHG-ADIN-DPLWSAKCLITSPHLVTKVHLDYLESGANIIITASYQ 79
Query: 310 --IRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
I+G + S+G +LR V+ EA I ++R + D+
Sbjct: 80 ATIQGFVAKGLSVGEAENLLR-------RSVEITYEAREIFYNR-----CTKGSWDFAYA 127
Query: 368 IKPSISS-QTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 426
K S AAS+G YG L DGSEYSG Y DS+++ L +HR V+ L ++G D +A
Sbjct: 128 GKASRRPILVAASVGSYGAYLADGSEYSGIYGDSVSKETLKDFHRRRVQILAKSGADLIA 187
Query: 427 LETIPAEKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP- 481
ETIP + EA A LL E P AW SF+ KD G+ S V +A+
Sbjct: 188 FETIPNKLEAEAYADLLEEEDIDIP---AWFSFTSKDGVSVPRGD---SVVECAKVADSC 241
Query: 482 DQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDT--EDEYSI 539
+ AIG+NC P ++ L+ ++Q +VYPN G V+D ++ KW+ + E E
Sbjct: 242 KNVVAIGINCTAPRYIHALIISLRQ-MTRKPIVVYPNSGEVYDGLNKKWIKSEGESEEDF 300
Query: 540 LHYVPQWLEEGVNIIGGCCEVTSYEIQQM-RIMIDE 574
+ YV +W + G ++ GGCC T I+ + +++ DE
Sbjct: 301 VSYVSKWRDAGASLFGGCCRTTPNTIRAIAKVLSDE 336
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 146/278 (52%), Gaps = 18/278 (6%)
Query: 1 MSKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQ 60
+ K ++DG F +++ RH D++ PLWS+ L T P + H D++ +GA+II
Sbjct: 17 LEKCGGYAVVDGGFATELQRHG-ADIN-DPLWSAKCLITSPHLVTKVHLDYLESGANIII 74
Query: 61 SSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKD-KENQTPDINLNKTFNLLTGH-- 117
++ YQA + G S EA +LL +SV++ A++ N+ + + +
Sbjct: 75 TASYQATIQGFVAKGLSVGEAENLLRRSVEITYEAREIFYNRCTKGSWDFAYAGKASRRP 134
Query: 118 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 177
I AAS+G YG L DGSEYSG Y DS+++ L +HR V+ L ++G D +A ETIP +
Sbjct: 135 ILVAASVGSYGAYLADGSEYSGIYGDSVSKETLKDFHRRRVQILAKSGADLIAFETIPNK 194
Query: 178 KEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIG 232
EA A LL E P AW SF+ KD G+ S V +A+ + AIG
Sbjct: 195 LEAEAYADLLEEEDIDIP---AWFSFTSKDGVSVPRGD---SVVECAKVADSCKNVVAIG 248
Query: 233 VNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDG 270
+NC P ++ L+ ++Q +VYPN G ++ DG
Sbjct: 249 INCTAPRYIHALIISLRQ-MTRKPIVVYPNSG-EVYDG 284
>gi|312075903|ref|XP_003140623.1| hypothetical protein LOAG_05038 [Loa loa]
gi|307764213|gb|EFO23447.1| hypothetical protein LOAG_05038 [Loa loa]
Length = 316
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 138/261 (52%), Gaps = 18/261 (6%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
KV+LLDG F +++ +V H LWS L P ++ H+ FI AG+DII ++ YQ
Sbjct: 9 KVQLLDGGFGTELEAAGY-NVKNHSLWSCAALFDNPNLILQVHKRFIEAGSDIILTNTYQ 67
Query: 66 ANVDNL-TKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
A + + G ++ A L K V L A D+ + + + S+
Sbjct: 68 ACISTMMNSRGMTKIAAESSLKKLVSLAQQAVDECSAREKV-------------KVVGSV 114
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG + DGSEYSGHYVD + E L+ +H L++AG+ +A ET+P+ KEA+A++
Sbjct: 115 GPYGVIFNDGSEYSGHYVDELEEQVLVDYHIQQTIPLLQAGLKVIAYETVPSYKEAVAIL 174
Query: 185 KLLREFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
K + W+SFSCK+ T+H E +V +++ I IG+NC P++++
Sbjct: 175 KAVNAINHSYNFWISFSCKNGEQTNHNESFCKSVEK--ISHHPNILGIGINCTSPNYITQ 232
Query: 244 LVRCIKQSHPTVQTIVYPNKG 264
L++ S ++ IVYPN G
Sbjct: 233 LLQSASISVNSLPFIVYPNSG 253
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 160/317 (50%), Gaps = 14/317 (4%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V+LLDG F +++ +V H LWS L P ++ H+ FI + + Y
Sbjct: 10 VQLLDGGFGTELEAAGY-NVKNHSLWSCAALFDNPNLILQVHKRFIEAGSDIILT-NTYQ 67
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
+ G E+ L + +L + VD + + + S+GPYG
Sbjct: 68 ACISTMMNSRG-MTKIAAESSL-----KKLVSLAQQAVDECSARE---KVKVVGSVGPYG 118
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
+ DGSEYSGHYVD + E L+ +H L++AG+ +A ET+P+ KEA+A++K +
Sbjct: 119 VIFNDGSEYSGHYVDELEEQVLVDYHIQQTIPLLQAGLKVIAYETVPSYKEAVAILKAVN 178
Query: 445 EFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
W+SFSCK+ T+H E +V +++ I IG+NC P++++ L++
Sbjct: 179 AINHSYNFWISFSCKNGEQTNHNESFCKSVEK--ISHHPNILGIGINCTSPNYITQLLQS 236
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
S ++ IVYPN G ++ KW + + + + + +W G+ ++GGCC V +
Sbjct: 237 ASISVNSLPFIVYPNSGEEYECGTKKWRNGKCIFPDMGQLMEWKNLGMKVVGGCCRVGAE 296
Query: 564 EIQQMRIMIDEFNTKKN 580
+I+++ ++ + N++ N
Sbjct: 297 KIKELSTLVAKLNSEYN 313
>gi|255638530|gb|ACU19573.1| unknown [Glycine max]
Length = 341
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 142/277 (51%), Gaps = 27/277 (9%)
Query: 1 MSKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQ 60
+ K ++DG F +++ RH D LWS+ L + P H D++ AGA+II
Sbjct: 16 LDKCGGCAVIDGGFATELERHGADLND--ELWSAKCLISSPHLVRRVHLDYLDAGANIIL 73
Query: 61 SSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSA---------KDKENQTPDINLNKTF 111
++ YQA + G+S +E +L +SV++ A KD + D K
Sbjct: 74 TASYQATIQGFEAKGFSREEGETMLRRSVEIAREAREIYYDRCTKDSSDFMRDERYRKRP 133
Query: 112 NLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 171
L+ AAS+G YG L DGSEY G Y D++T L +HR V+ LV AG D +A
Sbjct: 134 ILI------AASVGSYGAYLADGSEYVGDYGDAVTVQTLKDFHRERVKILVEAGADLIAF 187
Query: 172 ETIPAEKEALALVKLLREFPGQK-AWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQ 227
ETIP + EA A +LL E + AW SFSCKD+++ G+ I +S SC Q
Sbjct: 188 ETIPNKLEARAYAELLEEEGIETPAWFSFSCKDESNVVSGDSIFECASIADSC-----RQ 242
Query: 228 IQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+ A+GVNC P + L+ IK++ + +VYPN G
Sbjct: 243 VVAVGVNCTAPRFIHGLISFIKKA-TSKPVLVYPNSG 278
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 159/322 (49%), Gaps = 31/322 (9%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETA--- 317
G ++DG F +++ RH D LWS+ L + P H D++ I TA
Sbjct: 21 GCAVIDGGFATELERHGADLND--ELWSAKCLISSPHLVRRVHLDYLDAGANIILTASYQ 78
Query: 318 ASIGPY---GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA--LVRAGVDYLALIKPSI 372
A+I + G +G V+ EA I + R ++ +R D +P +
Sbjct: 79 ATIQGFEAKGFSREEGETMLRRSVEIAREAREIYYDRCTKDSSDFMR---DERYRKRPIL 135
Query: 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA 432
AAS+G YG L DGSEY G Y D++T L +HR V+ LV AG D +A ETIP
Sbjct: 136 ---IAASVGSYGAYLADGSEYVGDYGDAVTVQTLKDFHRERVKILVEAGADLIAFETIPN 192
Query: 433 EKEALALVKLLREFPGQK-AWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIG 488
+ EA A +LL E + AW SFSCKD+++ G+ I +S SC Q+ A+G
Sbjct: 193 KLEARAYAELLEEEGIETPAWFSFSCKDESNVVSGDSIFECASIADSC-----RQVVAVG 247
Query: 489 VNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTED--EYSILHYVPQW 546
VNC P + L+ IK++ + +VYPN G + + +W+ + E+ + Y+ +W
Sbjct: 248 VNCTAPRFIHGLISFIKKA-TSKPVLVYPNSGETYIAESNQWVKSSGAAEHDFVSYIGKW 306
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
+ G ++ GGCC T I+ +
Sbjct: 307 RDAGASLFGGCCRTTPNTIRGI 328
>gi|421784846|ref|ZP_16221282.1| homocysteine S-methyltransferase [Serratia plymuthica A30]
gi|407753030|gb|EKF63177.1| homocysteine S-methyltransferase [Serratia plymuthica A30]
Length = 312
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 162/316 (51%), Gaps = 16/316 (5%)
Query: 254 TVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH 313
TV ++ N+ + +LDG+ +++ D PLWS+ L PE + H D+
Sbjct: 6 TVAALLAANRTL-ILDGALATELEARGCDLSD--PLWSAKVLIENPELIYQVHLDYFNAG 62
Query: 314 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSIS 373
+ A + T L G + + +A +V+ +A DYLA +
Sbjct: 63 AQCAITASYQATPL-------GFLRRGLNQQQSLALIAKSVQLAQQARSDYLAQHPQAAP 115
Query: 374 SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
A S+GPYG L DGSEY G Y S+ + ++IA+HRP + AL AGVD LA ET+P+
Sbjct: 116 LLIAGSVGPYGAYLADGSEYRGDY--SLPQEEMIAFHRPRIAALAEAGVDLLACETLPSF 173
Query: 434 KEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
E AL+ LL+EFP AW +F+ +D H S G ++ V + L NP Q+ AIG+NC+
Sbjct: 174 SELQALLALLQEFPTLGAWFAFTLRDSQHLSDGTPLTQ-VLAALRGNP-QVLAIGINCIA 231
Query: 494 PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVN 552
+V+ +R + + +VYPN G +D+V W E S++ + +W G
Sbjct: 232 LENVTPALRQLA-TLTDKPLLVYPNSGEHYDAVTKTWHACGGESGSLIEQIGEWQNIGAR 290
Query: 553 IIGGCCEVTSYEIQQM 568
+IGGCC T +I+Q+
Sbjct: 291 LIGGCCRTTPQDIRQI 306
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/260 (36%), Positives = 140/260 (53%), Gaps = 18/260 (6%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ +LDG+ +++ D PLWS+ L PE + H D+ AGA ++ YQ
Sbjct: 15 RTLILDGALATELEARGCDLSD--PLWSAKVLIENPELIYQVHLDYFNAGAQCAITASYQ 72
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASI 124
A + G ++Q++L L+ KSVQL A+ D Q P + A S+
Sbjct: 73 ATPLGFLRRGLNQQQSLALIAKSVQLAQQARSDYLAQHPQ----------AAPLLIAGSV 122
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSEY G Y S+ + ++IA+HRP + AL AGVD LA ET+P+ E AL+
Sbjct: 123 GPYGAYLADGSEYRGDY--SLPQEEMIAFHRPRIAALAEAGVDLLACETLPSFSELQALL 180
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
LL+EFP AW +F+ +D H S G ++ V + L NP Q+ AIG+NC+ +V+
Sbjct: 181 ALLQEFPTLGAWFAFTLRDSQHLSDGTPLTQ-VLAALRGNP-QVLAIGINCIALENVTPA 238
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
+R + + +VYPN G
Sbjct: 239 LRQLA-TLTDKPLLVYPNSG 257
>gi|168025123|ref|XP_001765084.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683671|gb|EDQ70079.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 344
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 137/262 (52%), Gaps = 18/262 (6%)
Query: 11 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDN 70
DG F +Q+ RH D PLWS+ L T PE + HR+++ AGA +I ++ YQA +
Sbjct: 29 DGGFATQLERHGADIND--PLWSASCLITIPELVRKVHREYLEAGAGVISTASYQATIQG 86
Query: 71 LTKLGYSEQEALDLLHKSVQLMNSAKDK-----ENQTPDINLNKTFNLLTGHIETAASIG 125
G S EA DLL +SV++ +D+ +N+ NL AASIG
Sbjct: 87 FQSRGLSTNEAEDLLQRSVRIAQEERDRVWKESQNREHARTARAGSNL---RALVAASIG 143
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
YG L DGSEYSG Y SMT L +HR + L AG D LA+ETIP + E ALV+
Sbjct: 144 SYGAYLADGSEYSGDYGPSMTVDKLKDFHRRRLVVLADAGPDLLAIETIPCKLETQALVE 203
Query: 186 LLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
LL E + AW+SF+ KD + G+ S V L+ ++ A+G+NC P + L
Sbjct: 204 LLHEEDLRIPAWISFNSKDGVNVVSGDSFSDCVA--LVDKCPEVAAVGINCTPPRFILDL 261
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ ++ + P V VYPN G
Sbjct: 262 IHAARKVTNKPIV---VYPNSG 280
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 156/319 (48%), Gaps = 32/319 (10%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIR---GHIETA--- 317
G DG F +Q+ RH D PLWS+ L T PE + HR+++ G I TA
Sbjct: 24 GCVTTDGGFATQLERHGADIND--PLWSASCLITIPELVRKVHREYLEAGAGVISTASYQ 81
Query: 318 ASIGPY---GTVLRDGSEYSGHYVD-SMTEADLIAWHRPNVE--ALVRAGVDYLALIKPS 371
A+I + G + + V + E D + N E RAG + AL+
Sbjct: 82 ATIQGFQSRGLSTNEAEDLLQRSVRIAQEERDRVWKESQNREHARTARAGSNLRALV--- 138
Query: 372 ISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
AASIG YG L DGSEYSG Y SMT L +HR + L AG D LA+ETIP
Sbjct: 139 -----AASIGSYGAYLADGSEYSGDYGPSMTVDKLKDFHRRRLVVLADAGPDLLAIETIP 193
Query: 432 AEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490
+ E ALV+LL E + AW+SF+ KD + G+ S V L+ ++ A+G+N
Sbjct: 194 CKLETQALVELLHEEDLRIPAWISFNSKDGVNVVSGDSFSDCVA--LVDKCPEVAAVGIN 251
Query: 491 CVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTED--EYSILHYVPQW 546
C P + L+ ++ + P V VYPN G +D V +W+++ + + YV +W
Sbjct: 252 CTPPRFILDLIHAARKVTNKPIV---VYPNSGEHYDPVIKQWVESTGITDTDFVSYVHEW 308
Query: 547 LEEGVNIIGGCCEVTSYEI 565
+ G +IGGCC T I
Sbjct: 309 RKAGAQLIGGCCRTTPNTI 327
>gi|363807204|ref|NP_001242352.1| uncharacterized protein LOC100811127 [Glycine max]
gi|255644435|gb|ACU22722.1| unknown [Glycine max]
Length = 341
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 142/277 (51%), Gaps = 27/277 (9%)
Query: 1 MSKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQ 60
+ K ++DG F +++ RH D LWS+ L + P H D++ AGA+II
Sbjct: 16 LDKCGGCAVIDGGFATELERHGADLND--ELWSAKCLISSPHLVRRVHLDYLDAGANIIL 73
Query: 61 SSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSA---------KDKENQTPDINLNKTF 111
++ YQA + G+S +E +L +SV++ A KD + D K
Sbjct: 74 TASYQATIQGFEAKGFSREEGETMLRRSVEIAREAREIYYDRCTKDSSDFMRDERYRKRP 133
Query: 112 NLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 171
L+ AAS+G YG L DGSEY G Y D++T L +HR V+ LV AG D +A
Sbjct: 134 ILI------AASVGSYGAYLADGSEYVGDYGDAVTVQTLKDFHRERVKILVEAGADLIAF 187
Query: 172 ETIPAEKEALALVKLLREFPGQK-AWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQ 227
ETIP + EA A +LL E + AW SFSCKD+++ G+ I +S SC Q
Sbjct: 188 ETIPNKLEAQAYAELLEEEGIETPAWFSFSCKDESNVVSGDSIFECASIADSCR-----Q 242
Query: 228 IQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+ A+GVNC P + L+ IK++ + +VYPN G
Sbjct: 243 VVAVGVNCTAPRFIHGLISFIKKA-TSKPVLVYPNSG 278
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 158/320 (49%), Gaps = 31/320 (9%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETA--- 317
G ++DG F +++ RH D LWS+ L + P H D++ I TA
Sbjct: 21 GCAVIDGGFATELERHGADLND--ELWSAKCLISSPHLVRRVHLDYLDAGANIILTASYQ 78
Query: 318 ASIGPY---GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA--LVRAGVDYLALIKPSI 372
A+I + G +G V+ EA I + R ++ +R D +P +
Sbjct: 79 ATIQGFEAKGFSREEGETMLRRSVEIAREAREIYYDRCTKDSSDFMR---DERYRKRPIL 135
Query: 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA 432
AAS+G YG L DGSEY G Y D++T L +HR V+ LV AG D +A ETIP
Sbjct: 136 ---IAASVGSYGAYLADGSEYVGDYGDAVTVQTLKDFHRERVKILVEAGADLIAFETIPN 192
Query: 433 EKEALALVKLLREFPGQK-AWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIG 488
+ EA A +LL E + AW SFSCKD+++ G+ I +S SC Q+ A+G
Sbjct: 193 KLEAQAYAELLEEEGIETPAWFSFSCKDESNVVSGDSIFECASIADSCR-----QVVAVG 247
Query: 489 VNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTED--EYSILHYVPQW 546
VNC P + L+ IK++ + +VYPN G + + +W+ + E+ + Y+ +W
Sbjct: 248 VNCTAPRFIHGLISFIKKA-TSKPVLVYPNSGETYIAESNQWVKSSGAAEHDFVSYIGKW 306
Query: 547 LEEGVNIIGGCCEVTSYEIQ 566
+ G ++ GGCC T I+
Sbjct: 307 RDAGASLFGGCCRTTPNTIR 326
>gi|339998354|ref|YP_004729237.1| homocysteine s-methyltransferase [Salmonella bongori NCTC 12419]
gi|339511715|emb|CCC29424.1| homocysteine s-methyltransferase [Salmonella bongori NCTC 12419]
Length = 311
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 140/271 (51%), Gaps = 19/271 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L +P + H D+ RAGA + ++ YQA
Sbjct: 18 LLDGAMATELEARGCDLSDS--LWSAKVLLEKPALIRDVHLDYFRAGAQCVITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
D L G S+ +A L+ KSV+L A++ N G + A SIGPYG
Sbjct: 76 DGLAARGLSKAQATSLIGKSVELARKAREAYLAE---------NPQAGTLLIAGSIGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y + T A+HRP VEAL+ AG D LA ET+P E AL +LL
Sbjct: 127 AFLADGSEYRGDY--ARTPEQFQAFHRPRVEALLDAGADLLACETLPNFVEIQALAELLT 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+P +AW SF+ +D H S G + VT+CL P Q+ AIG+NC+ + + ++ +
Sbjct: 185 AYPRARAWFSFTLRDSKHLSDGTPLLE-VTACLNHYP-QVVAIGINCIALENATAALQHL 242
Query: 249 KQSHPTVQTIVYPNKGVKLLDGSFTSQVSRH 279
T+ +VYPN G + S+V RH
Sbjct: 243 -YGLTTLPLVVYPNSGEQY---DVASKVWRH 269
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 148/304 (48%), Gaps = 15/304 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
LLDG+ +++ D LWS+ L +P + H D+ R + + T
Sbjct: 18 LLDGAMATELEARGCDLSDS--LWSAKVLLEKPALIRDVHLDYFRAGAQCVITASYQATP 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
DG G +++A + +VE +A YLA + + A SIGPYG
Sbjct: 76 --DGLAARG-----LSKAQATSLIGKSVELARKAREAYLAENPQAGTLLIAGSIGPYGAF 128
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y + T A+HRP VEAL+ AG D LA ET+P E AL +LL +
Sbjct: 129 LADGSEYRGDY--ARTPEQFQAFHRPRVEALLDAGADLLACETLPNFVEIQALAELLTAY 186
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P +AW SF+ +D H S G + VT+CL P Q+ AIG+NC+ + + ++ +
Sbjct: 187 PRARAWFSFTLRDSKHLSDGTPLLE-VTACLNHYP-QVVAIGINCIALENATAALQHL-Y 243
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
T+ +VYPN G +D W E + ++PQW G ++GGCC T +I
Sbjct: 244 GLTTLPLVVYPNSGEQYDVASKVWRHHGETCARLADHLPQWWAAGARLMGGCCRTTPADI 303
Query: 566 QQMR 569
++
Sbjct: 304 AGLK 307
>gi|402303086|ref|ZP_10822184.1| homocysteine S-methyltransferase [Selenomonas sp. FOBRC9]
gi|400379316|gb|EJP32160.1| homocysteine S-methyltransferase [Selenomonas sp. FOBRC9]
Length = 332
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 142/283 (50%), Gaps = 34/283 (12%)
Query: 4 ICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+ + +LDG+F +++ D LWS+ + P+ + H D++RAGADI+ S+
Sbjct: 10 VSNILVLDGAFATELEARGFSVNDA--LWSAKAIFERPDLVRDVHLDYLRAGADIVTSAS 67
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKD------------------KENQTPDI 105
YQA V+ K G++E++A L+ +SV+L A+D +E QT
Sbjct: 68 YQATVEGFVKKGFTEEQAAALIVRSVELAREARDIYCLESLADEYHAQEESTREEQTSCS 127
Query: 106 NLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG 165
+ + + G AAS+GPYG L DGSEY G Y + E L A+H + L
Sbjct: 128 SDPREKS--GGAPLVAASVGPYGAYLADGSEYRGDY--GVDEDALTAFHADRLVLLAEGQ 183
Query: 166 VDYLALETIPAEKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL 221
D LA ET+P EA A+V+ LRE P AW SFSC+D H S G I+
Sbjct: 184 PDLLACETLPCLPEARAIVRALREKKIHIP---AWFSFSCRDGAHISDGTPIADCAR--F 238
Query: 222 LANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
LA + A+GVNC P ++ L+R I++ +VYPN G
Sbjct: 239 LAGVSEAVAVGVNCTAPQYIQDLIRAIRRETDK-PVVVYPNSG 280
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 141/331 (42%), Gaps = 50/331 (15%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ +LDG+F +++ D LWS+ + P+ + H D++R + S
Sbjct: 13 ILVLDGAFATELEARGFSVNDA--LWSAKAIFERPDLVRDVHLDYLRAGADIVTSASYQA 70
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD----------YLALIKPSISS 374
TV G TE A +VE L R D Y A + +
Sbjct: 71 TV-------EGFVKKGFTEEQAAALIVRSVE-LAREARDIYCLESLADEYHAQEESTREE 122
Query: 375 QT----------------AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV 418
QT AAS+GPYG L DGSEY G Y + E L A+H + L
Sbjct: 123 QTSCSSDPREKSGGAPLVAASVGPYGAYLADGSEYRGDY--GVDEDALTAFHADRLVLLA 180
Query: 419 RAGVDYLALETIPAEKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVT 474
D LA ET+P EA A+V+ LRE P AW SFSC+D H S G I+
Sbjct: 181 EGQPDLLACETLPCLPEARAIVRALREKKIHIP---AWFSFSCRDGAHISDGTPIADCAR 237
Query: 475 SCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE 534
LA + A+GVNC P ++ L+R I++ +VYPN G + W T
Sbjct: 238 --FLAGVSEAVAVGVNCTAPQYIQDLIRAIRRETDK-PVVVYPNSGEDYSVSDKSWHGTA 294
Query: 535 DEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
++++ +W G IIGGCC + +I
Sbjct: 295 EDFAA--GARRWRMAGARIIGGCCRTSPRDI 323
>gi|302799886|ref|XP_002981701.1| hypothetical protein SELMODRAFT_179106 [Selaginella moellendorffii]
gi|300150533|gb|EFJ17183.1| hypothetical protein SELMODRAFT_179106 [Selaginella moellendorffii]
Length = 326
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 145/267 (54%), Gaps = 20/267 (7%)
Query: 3 KICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSS 62
K C VK DG F +Q+ +H D PLWS++ L T P + H +++ +GA+++ +S
Sbjct: 20 KGCVVK--DGGFATQLEKHGALLND--PLWSALCLITNPGLIAKVHWEYLESGAEVLVTS 75
Query: 63 CYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAA 122
YQA + G S +E+ LL KSV L A+D+ +T + FN AA
Sbjct: 76 SYQATLQGFQSRGISLEESEALLRKSVTLACEARDRFWRTKRAQKAERFN----RPLVAA 131
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
SIG YG L DGSEYSG Y MT L +HR ++ L G D LA+ETIP++ EA A
Sbjct: 132 SIGSYGAFLADGSEYSGDYGPGMTLKKLKDFHRRRLQILSSCGPDLLAIETIPSKLEAQA 191
Query: 183 LVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 238
++LL E P AW++FS KD + G+ S ++ +L D++ A+G+NC P
Sbjct: 192 FIELLGEEDIDVP---AWIAFSSKDGKNVVSGDNFSESIA--MLDKCDKVVAVGINCCPP 246
Query: 239 SHVSTLVRCIKQSHPTVQTI-VYPNKG 264
V L+ +++ T +TI VYPN G
Sbjct: 247 HFVEGLIHEARKA--TSKTIVVYPNSG 271
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 145/316 (45%), Gaps = 36/316 (11%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIE------ 315
+KG + DG F +Q+ +H D PLWS++ L T P + H +++ E
Sbjct: 19 HKGCVVKDGGFATQLEKHGALLND--PLWSALCLITNPGLIAKVHWEYLESGAEVLVTSS 76
Query: 316 ---TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSI 372
T G L + V EA W + R +P +
Sbjct: 77 YQATLQGFQSRGISLEESEALLRKSVTLACEARDRFWRTKRAQKAER-------FNRPLV 129
Query: 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA 432
AASIG YG L DGSEYSG Y MT L +HR ++ L G D LA+ETIP+
Sbjct: 130 ----AASIGSYGAFLADGSEYSGDYGPGMTLKKLKDFHRRRLQILSSCGPDLLAIETIPS 185
Query: 433 EKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIG 488
+ EA A ++LL E P AW++FS KD + G+ S ++ +L D++ A+G
Sbjct: 186 KLEAQAFIELLGEEDIDVP---AWIAFSSKDGKNVVSGDNFSESIA--MLDKCDKVVAVG 240
Query: 489 VNCVRPSHVSTLVRCIKQSHPTVQTI-VYPNKGGVWDSVHMKWLDTED--EYSILHYVPQ 545
+NC P V L+ +++ T +TI VYPN G +D W E E + +V
Sbjct: 241 INCCPPHFVEGLIHEARKA--TSKTIVVYPNSGEQYDPKTKLWKVQERNCEKDFMAFVKN 298
Query: 546 WLEEGVNIIGGCCEVT 561
W G N+IGGCC T
Sbjct: 299 WKRAGANVIGGCCRTT 314
>gi|302768791|ref|XP_002967815.1| hypothetical protein SELMODRAFT_88753 [Selaginella moellendorffii]
gi|300164553|gb|EFJ31162.1| hypothetical protein SELMODRAFT_88753 [Selaginella moellendorffii]
Length = 326
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 145/267 (54%), Gaps = 20/267 (7%)
Query: 3 KICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSS 62
K C VK DG F +Q+ +H D PLWS++ L T P + H +++ +GA+++ +S
Sbjct: 20 KGCVVK--DGGFATQLEKHGALLND--PLWSALCLITNPGLIAKVHWEYLESGAEVLVTS 75
Query: 63 CYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAA 122
YQA + G S +E+ LL KSV L A+D+ +T + FN AA
Sbjct: 76 SYQATLQGFQSRGISLEESEALLRKSVTLACEARDRFWRTKRAQGAERFN----RPLVAA 131
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
SIG YG L DGSEYSG Y MT L +HR ++ L G D LA+ETIP++ EA A
Sbjct: 132 SIGSYGAFLADGSEYSGDYGPGMTLKKLKDFHRRRLQILSSCGPDLLAIETIPSKLEAQA 191
Query: 183 LVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 238
++LL E P AW++FS KD + G+ S ++ +L D++ A+G+NC P
Sbjct: 192 FIELLGEEDIDVP---AWIAFSSKDGKNVVSGDNFSESIA--MLDKCDKVVAVGINCCPP 246
Query: 239 SHVSTLVRCIKQSHPTVQTI-VYPNKG 264
V L+ +++ T +TI VYPN G
Sbjct: 247 HFVEGLIHEARKA--TSKTIVVYPNSG 271
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 145/316 (45%), Gaps = 36/316 (11%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIE------ 315
+KG + DG F +Q+ +H D PLWS++ L T P + H +++ E
Sbjct: 19 HKGCVVKDGGFATQLEKHGALLND--PLWSALCLITNPGLIAKVHWEYLESGAEVLVTSS 76
Query: 316 ---TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSI 372
T G L + V EA W + R +P +
Sbjct: 77 YQATLQGFQSRGISLEESEALLRKSVTLACEARDRFWRTKRAQGAER-------FNRPLV 129
Query: 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA 432
AASIG YG L DGSEYSG Y MT L +HR ++ L G D LA+ETIP+
Sbjct: 130 ----AASIGSYGAFLADGSEYSGDYGPGMTLKKLKDFHRRRLQILSSCGPDLLAIETIPS 185
Query: 433 EKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIG 488
+ EA A ++LL E P AW++FS KD + G+ S ++ +L D++ A+G
Sbjct: 186 KLEAQAFIELLGEEDIDVP---AWIAFSSKDGKNVVSGDNFSESIA--MLDKCDKVVAVG 240
Query: 489 VNCVRPSHVSTLVRCIKQSHPTVQTI-VYPNKGGVWDSVHMKWLDTED--EYSILHYVPQ 545
+NC P V L+ +++ T +TI VYPN G +D W E E + +V
Sbjct: 241 INCCPPHFVEGLIHEARKA--TSKTIVVYPNSGEQYDPKTKLWKVQERNCEKDFMAFVKN 298
Query: 546 WLEEGVNIIGGCCEVT 561
W G N+IGGCC T
Sbjct: 299 WKRAGANVIGGCCRTT 314
>gi|354596969|ref|ZP_09014986.1| Homocysteine S-methyltransferase [Brenneria sp. EniD312]
gi|353674904|gb|EHD20937.1| Homocysteine S-methyltransferase [Brenneria sp. EniD312]
Length = 321
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 147/300 (49%), Gaps = 15/300 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D PLWS+ L P + H D+ + A + T
Sbjct: 18 VLDGALATELEARGCDLND--PLWSAKVLVENPALIYQVHLDYFHAGAQCAITASYQATP 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
LR S +E A +V V+A D+ A SIGPYG
Sbjct: 76 LRFKSR-------GFSERQSQALIEKSVRLAVQARDDFRKTHSQVGKLLIAGSIGPYGAY 128
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y+ + +++++ +HR + L+ AGVD LA ET+P+ E AL +LL EF
Sbjct: 129 LADGSEYRGDYL--LPQSEMMDFHRVRMATLLDAGVDILACETLPSFPEIKALAELLTEF 186
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P AW SF+ +D H S G + +T LL Q+ A+G+NC+ + V+ + +
Sbjct: 187 PQASAWFSFTLRDSAHLSDGTPLREVLT--LLNAYPQVVAVGINCIALNKVTAALAQLS- 243
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNIIGGCCEVTSYEI 565
+ ++ +VYPN G +D+V W D + S+ Y+PQW G +IGGCC T +I
Sbjct: 244 AETSLPLVVYPNSGEHYDAVAKTWGDGDGHTCSLAEYLPQWRAAGAKLIGGCCRTTPADI 303
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 138/256 (53%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D PLWS+ L P + H D+ AGA ++ YQA
Sbjct: 18 VLDGALATELEARGCDLND--PLWSAKVLVENPALIYQVHLDYFHAGAQCAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G+SE+++ L+ KSV+L A+D + KT + + G + A SIGPYG
Sbjct: 76 LRFKSRGFSERQSQALIEKSVRLAVQARD--------DFRKTHSQV-GKLLIAGSIGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y+ + +++++ +HR + L+ AGVD LA ET+P+ E AL +LL
Sbjct: 127 AYLADGSEYRGDYL--LPQSEMMDFHRVRMATLLDAGVDILACETLPSFPEIKALAELLT 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP AW SF+ +D H S G + +T LL Q+ A+G+NC+ + V+ + +
Sbjct: 185 EFPQASAWFSFTLRDSAHLSDGTPLREVLT--LLNAYPQVVAVGINCIALNKVTAALAQL 242
Query: 249 KQSHPTVQTIVYPNKG 264
+ ++ +VYPN G
Sbjct: 243 S-AETSLPLVVYPNSG 257
>gi|6685163|gb|AAF23822.1|AF219223_1 homocysteine S-methyltransferase AtHMT-2 [Arabidopsis thaliana]
Length = 333
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 137/263 (52%), Gaps = 17/263 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG ++ RH D PLWS+ L T P H D++ AGADII S+ YQA +
Sbjct: 21 VIDGGLATEFERHGADLND--PLWSAKCLVTSPHLIHTVHLDYLEAGADIISSASYQATI 78
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH-IETAASIGPY 127
G+S +E+ LL KSV++ A++ + + +L I AAS+G Y
Sbjct: 79 QGFEAKGFSREESESLLKKSVEIACEARNSYYDKCGTSSSMDDKILKKRPILVAASVGSY 138
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEYSG Y DS+T L +HR ++ L +G D +A ETIP + EA A LL
Sbjct: 139 GAYLADGSEYSGIYGDSITLEKLKDFHRRRLQVLAESGADLIAFETIPNKIEAQAFADLL 198
Query: 188 RE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
E PG W SF+ KD + G+ I ++ + N +++ A+G+NC P +
Sbjct: 199 EEGDVKIPG---WFSFNSKDGVNVVSGDSIKECIS--IAENCEKVVAVGINCTPPRFIEG 253
Query: 244 LVRCIKQ--SHPTVQTIVYPNKG 264
LV I++ S P +VYPN G
Sbjct: 254 LVLEIEKVTSKP---ILVYPNSG 273
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 159/337 (47%), Gaps = 35/337 (10%)
Query: 250 QSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDF 309
S +++ + G ++DG ++ RH D PLWS+ L T P H D+
Sbjct: 4 NSFNSMKDFLKQTGGYAVIDGGLATEFERHGADLND--PLWSAKCLVTSPHLIHTVHLDY 61
Query: 310 IRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIK 369
+ + +S T+ G E G S E++ + + +VE A Y
Sbjct: 62 LEAGADIISSASYQATI--QGFEAKGF---SREESESLL--KKSVEIACEARNSYYDKCG 114
Query: 370 PSISSQ----------TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR 419
S S AAS+G YG L DGSEYSG Y DS+T L +HR ++ L
Sbjct: 115 TSSSMDDKILKKRPILVAASVGSYGAYLADGSEYSGIYGDSITLEKLKDFHRRRLQVLAE 174
Query: 420 AGVDYLALETIPAEKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTS 475
+G D +A ETIP + EA A LL E PG W SF+ KD + G+ I ++
Sbjct: 175 SGADLIAFETIPNKIEAQAFADLLEEGDVKIPG---WFSFNSKDGVNVVSGDSIKECIS- 230
Query: 476 CLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDT 533
+ N +++ A+G+NC P + LV I++ S P +VYPN G +D+ +W++
Sbjct: 231 -IAENCEKVVAVGINCTPPRFIEGLVLEIEKVTSKP---ILVYPNSGESYDADRKEWVEN 286
Query: 534 E--DEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+ + YV +W++ GV+++GGCC T I+ +
Sbjct: 287 TGVGDEDFVSYVEKWMDAGVSLLGGCCRTTPTTIRAI 323
>gi|400536414|ref|ZP_10799949.1| homocysteine methyltransferase [Mycobacterium colombiense CECT
3035]
gi|400330496|gb|EJO87994.1| homocysteine methyltransferase [Mycobacterium colombiense CECT
3035]
Length = 294
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/261 (37%), Positives = 130/261 (49%), Gaps = 30/261 (11%)
Query: 9 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
LLDG +++ H + D PLWS+ L P H + RAGA I ++ YQ
Sbjct: 2 LLDGGLATELEARGHDLSD----PLWSAGLLADAPRDIAAVHAAYFRAGARIATTASYQG 57
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G+ +E LL +SV+L +A+D+ LL AASIGP
Sbjct: 58 SFEGFAARGFDRRETAGLLRRSVELAQAARDEAGGA---------GLL-----VAASIGP 103
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y ++ A L WHRP +E L AG D LA ET+P EA ALV+L
Sbjct: 104 YGAALADGSEYRGRY--GLSVAALARWHRPRLEILADAGADLLACETVPDVDEAQALVEL 161
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV-STLV 245
+R G+ AWLS++ D T G+ ++ A + A D+I AIGVNC P V +
Sbjct: 162 VRSV-GKPAWLSYTIDGD-RTRAGQPLADAFA--VAAGVDEIVAIGVNCCAPGDVLPAIA 217
Query: 246 RCIKQSHPTVQTIVYPNKGVK 266
R P I YPN G +
Sbjct: 218 RAAAVGKP---VIAYPNSGER 235
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 141/306 (46%), Gaps = 30/306 (9%)
Query: 267 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
LLDG +++ H + D PLWS+ L P H + R A + G
Sbjct: 2 LLDGGLATELEARGHDLSD----PLWSAGLLADAPRDIAAVHAAYFRAGARIATTASYQG 57
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
+ ++ D A L+ R +VE L +A D AASIGPYG
Sbjct: 58 SF----EGFAARGFDRRETAGLL---RRSVE-LAQAARDEAG----GAGLLVAASIGPYG 105
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
L DGSEY G Y ++ A L WHRP +E L AG D LA ET+P EA ALV+L+R
Sbjct: 106 AALADGSEYRGRY--GLSVAALARWHRPRLEILADAGADLLACETVPDVDEAQALVELVR 163
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV-STLVRC 503
G+ AWLS++ D T G+ ++ A + A D+I AIGVNC P V + R
Sbjct: 164 SV-GKPAWLSYTIDGD-RTRAGQPLADAFA--VAAGVDEIVAIGVNCCAPGDVLPAIARA 219
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
P I YPN G WD + W+ + L QW G I+GGCC V
Sbjct: 220 AAVGKP---VIAYPNSGERWDGLRHTWIGPSRFSAQL--AKQWTAAGARIVGGCCRVGPA 274
Query: 564 EIQQMR 569
EI ++R
Sbjct: 275 EIAEIR 280
>gi|449522026|ref|XP_004168029.1| PREDICTED: homocysteine S-methyltransferase 3-like [Cucumis
sativus]
Length = 338
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/262 (38%), Positives = 139/262 (53%), Gaps = 13/262 (4%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG F +++ R D PLWS+ L T P H D++ AGA+II ++ YQA +
Sbjct: 25 VLDGGFATELERLGADLND--PLWSAKCLLTSPHLVRRVHLDYLDAGANIISTASYQATI 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKD--KENQTPDI-NLNKTFNLLTGHIETAASIG 125
G+S E+ +LL KSV++ A+D E T D + +T I AASIG
Sbjct: 83 QGFEAKGFSRDESENLLRKSVEIAIEARDIYLERCTKDSWDFTETGAGSRRPILIAASIG 142
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
YG L DGSEYSG Y DS+T L +HR V+ L AG D +A ETIP + EA A +
Sbjct: 143 SYGAYLADGSEYSGEYGDSVTLETLKDFHRRRVQILANAGADLIAFETIPNKLEAQAYAE 202
Query: 186 LLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
LL E + AW SF+ KD + G+ IS + + Q+ A+G+NC P ++ L
Sbjct: 203 LLDEEGIEIPAWFSFNSKDGINVVSGDSISDCAS--IADASKQVVAVGINCTPPRYIHGL 260
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ I++ P V VYPN G
Sbjct: 261 ILSIREVTDKPIV---VYPNSG 279
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 152/322 (47%), Gaps = 31/322 (9%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G +LDG F +++ R D PLWS+ L T P H D++ ++
Sbjct: 22 GYGVLDGGFATELERLGADLND--PLWSAKCLLTSPHLVRRVHLDYLDAGANIISTASYQ 79
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA--------LIKPSISSQ 375
T+ G E G D +L+ R +VE + A YL + S+
Sbjct: 80 ATI--QGFEAKGFSRDE--SENLL---RKSVEIAIEARDIYLERCTKDSWDFTETGAGSR 132
Query: 376 ----TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
AASIG YG L DGSEYSG Y DS+T L +HR V+ L AG D +A ETIP
Sbjct: 133 RPILIAASIGSYGAYLADGSEYSGEYGDSVTLETLKDFHRRRVQILANAGADLIAFETIP 192
Query: 432 AEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490
+ EA A +LL E + AW SF+ KD + G+ IS + + Q+ A+G+N
Sbjct: 193 NKLEAQAYAELLDEEGIEIPAWFSFNSKDGINVVSGDSISDCAS--IADASKQVVAVGIN 250
Query: 491 CVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYS--ILHYVPQW 546
C P ++ L+ I++ P V VYPN G +D V +WL ++ + YV +W
Sbjct: 251 CTPPRYIHGLILSIREVTDKPIV---VYPNSGESYDGVTKRWLKSDGMIGEDFVSYVRKW 307
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
E G ++ GGCC T I+ +
Sbjct: 308 KEAGASLFGGCCRTTPNTIRGI 329
>gi|365104866|ref|ZP_09334258.1| homocysteine S-methyltransferase [Citrobacter freundii 4_7_47CFAA]
gi|363643807|gb|EHL83111.1| homocysteine S-methyltransferase [Citrobacter freundii 4_7_47CFAA]
Length = 310
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 145/306 (47%), Gaps = 15/306 (4%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG+ +++ D LWS+ L PE E H D+ R + A +
Sbjct: 16 ILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQA 73
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
T +G + EA A +VE +A YLA + A S+GPYG
Sbjct: 74 TP-------AGFAARGLDEAQSKALIGKSVELARKAREAYLAENPQAGMLLVAGSVGPYG 126
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
L DGSEY G Y S+ A+HRP VEAL+ AG D LA ET+P E AL +LL
Sbjct: 127 AYLADGSEYRGDYHCSVEA--FQAFHRPRVEALLDAGADLLACETLPNFAEIEALAELLT 184
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 504
+P +AW SF+ D H S G + V LLA Q+ A+G+NC+ + + ++ +
Sbjct: 185 AYPRARAWFSFTLCDSEHLSDGTPLRDVVA--LLAGYPQVVALGINCIALENTTAALQHL 242
Query: 505 KQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
+ +VYPN G +D+V W E + Y+PQW G +IGGCC T
Sbjct: 243 -HGLTALPLVVYPNSGEQYDAVSKTWHHHGEHCAQLADYLPQWQAAGARLIGGCCRTTPA 301
Query: 564 EIQQMR 569
+I ++
Sbjct: 302 DIAALK 307
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 127/258 (49%), Gaps = 16/258 (6%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ D LWS+ L PE E H D+ RAGA ++ YQA
Sbjct: 16 ILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQA 73
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
G E ++ L+ KSV+L A++ N G + A S+GP
Sbjct: 74 TPAGFAARGLDEAQSKALIGKSVELARKAREA---------YLAENPQAGMLLVAGSVGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y S+ A+HRP VEAL+ AG D LA ET+P E AL +L
Sbjct: 125 YGAYLADGSEYRGDYHCSVEA--FQAFHRPRVEALLDAGADLLACETLPNFAEIEALAEL 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L +P +AW SF+ D H S G + V LLA Q+ A+G+NC+ + + ++
Sbjct: 183 LTAYPRARAWFSFTLCDSEHLSDGTPLRDVVA--LLAGYPQVVALGINCIALENTTAALQ 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
+ + +VYPN G
Sbjct: 241 HL-HGLTALPLVVYPNSG 257
>gi|21593147|gb|AAM65096.1| putative selenocysteine methyltransferase [Arabidopsis thaliana]
Length = 347
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 164/336 (48%), Gaps = 46/336 (13%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDF-------------- 309
G +++DG F +++ RH D++ P+WS+ L T P + H D+
Sbjct: 22 GYEVVDGGFATELQRHG-ADIN-DPIWSAKCLITSPHLVTKVHLDYLESGANIIITASYQ 79
Query: 310 --IRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
I+G + S+G +LR V+ EA I ++R + D+
Sbjct: 80 ATIQGFVAKGLSVGEAENLLR-------RSVEITYEAREIFYNR-----WTKGSWDFAYA 127
Query: 368 IKPSISS-QTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 426
K S AAS+G YG L DGSEYSG Y DS+++ L +HR V+ L ++G D +A
Sbjct: 128 GKASRRPILVAASVGSYGAYLADGSEYSGIYGDSVSKETLKDFHRRRVQILAKSGADLIA 187
Query: 427 LETIPAEKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP- 481
ETIP + EA A LL E P AW SF+ KD G+ S V +A+
Sbjct: 188 FETIPNKLEAEAYADLLEEEDIDIP---AWFSFTSKDGVSVPRGD---SVVECAKVADSC 241
Query: 482 DQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDT--EDEYSI 539
+ AIG+NC P ++ L+ ++Q +VYPN G V+D ++ KW+ + E E
Sbjct: 242 KNVVAIGINCTAPRYIHALIISLRQ-MTRKPIVVYPNSGEVYDGLNKKWIKSEGESEEDF 300
Query: 540 LHYVPQWLEEGVNIIGGCCEVTSYEIQQM-RIMIDE 574
+ YV +W + G ++ GGCC T I+ + +++ DE
Sbjct: 301 VSYVSKWRDAGASLFGGCCRTTPNTIRAIAKVLSDE 336
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 147/278 (52%), Gaps = 18/278 (6%)
Query: 1 MSKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQ 60
+ K +++DG F +++ RH D++ P+WS+ L T P + H D++ +GA+II
Sbjct: 17 LEKCGGYEVVDGGFATELQRHG-ADIN-DPIWSAKCLITSPHLVTKVHLDYLESGANIII 74
Query: 61 SSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKD-KENQTPDINLNKTFNLLTGH-- 117
++ YQA + G S EA +LL +SV++ A++ N+ + + +
Sbjct: 75 TASYQATIQGFVAKGLSVGEAENLLRRSVEITYEAREIFYNRWTKGSWDFAYAGKASRRP 134
Query: 118 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 177
I AAS+G YG L DGSEYSG Y DS+++ L +HR V+ L ++G D +A ETIP +
Sbjct: 135 ILVAASVGSYGAYLADGSEYSGIYGDSVSKETLKDFHRRRVQILAKSGADLIAFETIPNK 194
Query: 178 KEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIG 232
EA A LL E P AW SF+ KD G+ S V +A+ + AIG
Sbjct: 195 LEAEAYADLLEEEDIDIP---AWFSFTSKDGVSVPRGD---SVVECAKVADSCKNVVAIG 248
Query: 233 VNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDG 270
+NC P ++ L+ ++Q +VYPN G ++ DG
Sbjct: 249 INCTAPRYIHALIISLRQ-MTRKPIVVYPNSG-EVYDG 284
>gi|58426147|gb|AAW75184.1| homocysteine S-methyltransferase [Xanthomonas oryzae pv. oryzae
KACC 10331]
Length = 352
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 153/312 (49%), Gaps = 28/312 (8%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
+ G LLDG+ +++ D LWS+ L +PE + HRD+ + A +
Sbjct: 47 HDGCVLLDGALATELEHRGCDLNDA--LWSARVLIEQPELIYQVHRDYFAAGAQCAITAS 104
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
T L ++ +D LIA +VE V+A D+L + A S+G
Sbjct: 105 YQATPL----GFAARGLDVAQSQALIAR---SVELAVQARADHLHAQPQAAPLWVAGSVG 157
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG L DGSEY G YV + A L+ +HRP + AL AGVD LA ET+P+ E +AL +
Sbjct: 158 PYGAYLADGSEYRGDYV--LPIAQLMDFHRPRIAALADAGVDVLACETLPSASEIVALRQ 215
Query: 442 LLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 500
LL+ EFP AW SF+ +D H S G ++ V + L Q+ A+G+NC+ V+
Sbjct: 216 LLQSEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LDACTQVIAVGINCIALDQVTAA 273
Query: 501 VRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-------LDTEDEYSILHYVPQWLEEGVNI 553
+ + + + +VYPN G +D+ +W L D+++ WL G +
Sbjct: 274 LHSLS-ALTALPLVVYPNSGEHYDASDKRWHAGHASALTLADQHA------HWLAAGARL 326
Query: 554 IGGCCEVTSYEI 565
IGGCC T +I
Sbjct: 327 IGGCCRTTPRDI 338
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 131/258 (50%), Gaps = 19/258 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L +PE + HRD+ AGA ++ YQA
Sbjct: 52 LLDGALATELEHRGCDLNDA--LWSARVLIEQPELIYQVHRDYFAAGAQCAITASYQATP 109
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASIGPY 127
G ++ L+ +SV+L A+ D + P + A S+GPY
Sbjct: 110 LGFAARGLDVAQSQALIARSVELAVQARADHLHAQPQ----------AAPLWVAGSVGPY 159
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G YV + A L+ +HRP + AL AGVD LA ET+P+ E +AL +LL
Sbjct: 160 GAYLADGSEYRGDYV--LPIAQLMDFHRPRIAALADAGVDVLACETLPSASEIVALRQLL 217
Query: 188 R-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+ EFP AW SF+ +D H S G ++ V + L Q+ A+G+NC+ V+ +
Sbjct: 218 QSEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LDACTQVIAVGINCIALDQVTAALH 275
Query: 247 CIKQSHPTVQTIVYPNKG 264
+ + + +VYPN G
Sbjct: 276 SLS-ALTALPLVVYPNSG 292
>gi|224111688|ref|XP_002315941.1| homocysteine s-methyltransferase [Populus trichocarpa]
gi|222864981|gb|EEF02112.1| homocysteine s-methyltransferase [Populus trichocarpa]
Length = 329
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 139/264 (52%), Gaps = 24/264 (9%)
Query: 9 LLDGSFTSQVSRH--TIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
++DG F +Q+ RH TI D PLWS++ L +P+ H +++ AGADI+ +S YQA
Sbjct: 22 VIDGGFATQLERHGATIND----PLWSALCLIKDPDLIKRVHLEYLEAGADILVTSSYQA 77
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ G S +E LL KSV L A++K + N ++N AASIG
Sbjct: 78 TLPGFLSRGLSAEEGELLLKKSVTLAVEARNKFWDAVERNPGHSYN----RALVAASIGS 133
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEYSG Y + L +HR ++ LV+A D LA ETIP + EA A V+L
Sbjct: 134 YGAYLADGSEYSGCYGPDVNLEKLKDFHRRRLQVLVKASPDLLAFETIPNKLEAQACVEL 193
Query: 187 LRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA--NPDQIQAIGVNCVRPSH 240
L E P +W+ FSC D + GE + CL A D+++A+G+NC P
Sbjct: 194 LEEENINIP---SWICFSCVDGENAPSGE----SFQQCLEAINKSDRVKAVGINCAPPHF 246
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKG 264
+ +L+ C + +VYPN G
Sbjct: 247 IESLI-CKFKELTEKLIVVYPNSG 269
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 170/344 (49%), Gaps = 38/344 (11%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRH--TIKDVDGHPLWSSVYLTTEPEACVET 305
+++ +++ ++ G ++DG F +Q+ RH TI D PLWS++ L +P+
Sbjct: 3 FQKAKTSLEDLIKKAGGCAVIDGGFATQLERHGATIND----PLWSALCLIKDPDLIKRV 58
Query: 306 HRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL 365
H +++ + + T+ G G S E +L+ + +V V A +
Sbjct: 59 HLEYLEAGADILVTSSYQATL--PGFLSRGL---SAEEGELLL--KKSVTLAVEARNKFW 111
Query: 366 ALIK--PSIS---SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 420
++ P S + AASIG YG L DGSEYSG Y + L +HR ++ LV+A
Sbjct: 112 DAVERNPGHSYNRALVAASIGSYGAYLADGSEYSGCYGPDVNLEKLKDFHRRRLQVLVKA 171
Query: 421 GVDYLALETIPAEKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSC 476
D LA ETIP + EA A V+LL E P +W+ FSC D + GE + C
Sbjct: 172 SPDLLAFETIPNKLEAQACVELLEEENINIP---SWICFSCVDGENAPSGE----SFQQC 224
Query: 477 LLA--NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDT- 533
L A D+++A+G+NC P + +L+ C + +VYPN G VWD +WL +
Sbjct: 225 LEAINKSDRVKAVGINCAPPHFIESLI-CKFKELTEKLIVVYPNSGEVWDGRAKRWLPST 283
Query: 534 ---EDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDE 574
+D++ + + +W + G ++IGGCC T IQ + ++ +
Sbjct: 284 CFDDDKFEV--FATRWHDLGASLIGGCCRTTPSTIQAISKVLKD 325
>gi|161898998|ref|YP_200569.2| homocysteine methyltransferase [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|188577204|ref|YP_001914133.1| homocysteine methyltransferase [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188521656|gb|ACD59601.1| homocysteine S-methyltransferase [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 325
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 153/312 (49%), Gaps = 28/312 (8%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
+ G LLDG+ +++ D LWS+ L +PE + HRD+ + A +
Sbjct: 20 HDGCVLLDGALATELEHRGCDLNDA--LWSARVLIEQPELIYQVHRDYFAAGAQCAITAS 77
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
T L ++ +D LIA +VE V+A D+L + A S+G
Sbjct: 78 YQATPL----GFAARGLDVAQSQALIA---RSVELAVQARADHLHAQPQAAPLWVAGSVG 130
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG L DGSEY G YV + A L+ +HRP + AL AGVD LA ET+P+ E +AL +
Sbjct: 131 PYGAYLADGSEYRGDYV--LPIAQLMDFHRPRIAALADAGVDVLACETLPSASEIVALRQ 188
Query: 442 LLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 500
LL+ EFP AW SF+ +D H S G ++ V + L Q+ A+G+NC+ V+
Sbjct: 189 LLQSEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LDACTQVIAVGINCIALDQVTAA 246
Query: 501 VRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-------LDTEDEYSILHYVPQWLEEGVNI 553
+ + + + +VYPN G +D+ +W L D+++ WL G +
Sbjct: 247 LHSLS-ALTALPLVVYPNSGEHYDASDKRWHAGHASALTLADQHA------HWLAAGARL 299
Query: 554 IGGCCEVTSYEI 565
IGGCC T +I
Sbjct: 300 IGGCCRTTPRDI 311
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 131/258 (50%), Gaps = 19/258 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L +PE + HRD+ AGA ++ YQA
Sbjct: 25 LLDGALATELEHRGCDLNDA--LWSARVLIEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASIGPY 127
G ++ L+ +SV+L A+ D + P + A S+GPY
Sbjct: 83 LGFAARGLDVAQSQALIARSVELAVQARADHLHAQPQ----------AAPLWVAGSVGPY 132
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G YV + A L+ +HRP + AL AGVD LA ET+P+ E +AL +LL
Sbjct: 133 GAYLADGSEYRGDYV--LPIAQLMDFHRPRIAALADAGVDVLACETLPSASEIVALRQLL 190
Query: 188 R-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+ EFP AW SF+ +D H S G ++ V + L Q+ A+G+NC+ V+ +
Sbjct: 191 QSEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LDACTQVIAVGINCIALDQVTAALH 248
Query: 247 CIKQSHPTVQTIVYPNKG 264
+ + + +VYPN G
Sbjct: 249 SLS-ALTALPLVVYPNSG 265
>gi|432532493|ref|ZP_19769499.1| homocysteine S-methyltransferase [Escherichia coli KTE234]
gi|431064669|gb|ELD73534.1| homocysteine S-methyltransferase [Escherichia coli KTE234]
Length = 310
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 147/306 (48%), Gaps = 15/306 (4%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG+ +++ D LWS+ L PE + H D+ R + A +
Sbjct: 16 ILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIRKVHLDYYRAGAQCAITASYQA 73
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
T +G + EA A +VE +A YLA + + A S+GPYG
Sbjct: 74 TP-------AGFAARGLDEAQSKALIGKSVELARKAREAYLAENPQAGTLLVAGSVGPYG 126
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
L DGSEY G Y S+ A+HRP VEAL+ AG D LA ET+P E AL +LL
Sbjct: 127 AYLADGSEYRGDYHCSVEA--FQAFHRPRVEALLDAGADLLACETLPNFSEIEALAELLT 184
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 504
+P +AW SF+ +D H S G + V LA Q+ A+G+NC+ + + ++ +
Sbjct: 185 AYPRARAWFSFTLRDSEHLSDGTPLRDVVA--FLAGYPQVVALGINCIALENTTAALQHL 242
Query: 505 KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQWLEEGVNIIGGCCEVTSY 563
+ +VYPN G +D+V W + + L Y+PQW G +IGGCC T
Sbjct: 243 -HGLTVLPLVVYPNSGEHYDAVSKTWHHHGEHCAQLADYLPQWQAAGARLIGGCCRTTPA 301
Query: 564 EIQQMR 569
+I ++
Sbjct: 302 DIAALK 307
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 127/258 (49%), Gaps = 16/258 (6%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ D LWS+ L PE + H D+ RAGA ++ YQA
Sbjct: 16 ILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIRKVHLDYYRAGAQCAITASYQA 73
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
G E ++ L+ KSV+L A++ N G + A S+GP
Sbjct: 74 TPAGFAARGLDEAQSKALIGKSVELARKAREAYLAE---------NPQAGTLLVAGSVGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y S+ A+HRP VEAL+ AG D LA ET+P E AL +L
Sbjct: 125 YGAYLADGSEYRGDYHCSVEA--FQAFHRPRVEALLDAGADLLACETLPNFSEIEALAEL 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L +P +AW SF+ +D H S G + V LA Q+ A+G+NC+ + + ++
Sbjct: 183 LTAYPRARAWFSFTLRDSEHLSDGTPLRDVVA--FLAGYPQVVALGINCIALENTTAALQ 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
+ + +VYPN G
Sbjct: 241 HL-HGLTVLPLVVYPNSG 257
>gi|297814814|ref|XP_002875290.1| ATHMT-1/HMT-1 [Arabidopsis lyrata subsp. lyrata]
gi|297321128|gb|EFH51549.1| ATHMT-1/HMT-1 [Arabidopsis lyrata subsp. lyrata]
Length = 326
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 132/257 (51%), Gaps = 10/257 (3%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG F +Q+ H D PLWS+V L PE H +++ AGADI+ +S YQA +
Sbjct: 22 VVDGGFATQLENHGAAIND--PLWSAVSLIKNPELIKRVHMEYLEAGADIVVTSSYQATI 79
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G + +E+ LL KSVQL A+D+ ++N AASIG YG
Sbjct: 80 PGFLSRGLAIEESESLLQKSVQLAVEARDRFWDKVSKVSGHSYN----RALVAASIGSYG 135
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEYSG+Y ++++ L +HR ++ LV AG D LA ETIP + EA A V+LL
Sbjct: 136 AYLADGSEYSGYYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLE 195
Query: 189 EFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
E Q AW+ F+ D GE + + L + I A+G+NC P + L+ C
Sbjct: 196 EEKVQIPAWICFTSVDGEKAPSGESFEECLEA--LNKSNNIYAVGINCAPPQFIENLI-C 252
Query: 248 IKQSHPTVQTIVYPNKG 264
+VYPN G
Sbjct: 253 KFAKLTKKAIVVYPNSG 269
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 157/327 (48%), Gaps = 16/327 (4%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+++ ++ ++ G ++DG F +Q+ H D PLWS+V L PE H
Sbjct: 3 LEKKSALLEDLIKKCGGCAVVDGGFATQLENHGAAIND--PLWSAVSLIKNPELIKRVHM 60
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
+++ + + T+ G G ++ +E+ L + VEA R +
Sbjct: 61 EYLEAGADIVVTSSYQATI--PGFLSRGLAIEE-SESLLQKSVQLAVEARDRFWDKVSKV 117
Query: 368 IKPSIS-SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 426
S + + AASIG YG L DGSEYSG+Y ++++ L +HR ++ LV AG D LA
Sbjct: 118 SGHSYNRALVAASIGSYGAYLADGSEYSGYYGENVSLDKLKDFHRRRLQVLVEAGPDLLA 177
Query: 427 LETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ 485
ETIP + EA A V+LL E Q AW+ F+ D GE + + L + I
Sbjct: 178 FETIPNKLEAQACVELLEEEKVQIPAWICFTSVDGEKAPSGESFEECLEA--LNKSNNIY 235
Query: 486 AIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE----DEYSILH 541
A+G+NC P + L+ C +VYPN G VWD +WL ++ DE+ +
Sbjct: 236 AVGINCAPPQFIENLI-CKFAKLTKKAIVVYPNSGEVWDGKAKQWLPSQCFGDDEFEM-- 292
Query: 542 YVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+ +W + G +IGGCC T I+ +
Sbjct: 293 FATKWRDLGAKLIGGCCRTTPSTIKAI 319
>gi|421908577|ref|ZP_16338412.1| Homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410117368|emb|CCM81037.1| Homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
Length = 314
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 160/324 (49%), Gaps = 17/324 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P T + + LLDG+ +++ D LWS+ L P+ + H
Sbjct: 1 MSQTNPF--TALLAAQPFVLLDGAMATELEARGCDLADS--LWSAKVLLENPQLIRDVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T G ++ +D LI +VE +A YLA
Sbjct: 57 DYFRAGAQVAITASYQATPA--GXXFAARGLDEAQSRALIG---KSVELARKAREAYLAE 111
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G Y S E A+HRP VEAL+ AG D LA
Sbjct: 112 NPQAGTLLVAGSVGPYGAFLADGSEYRGDYQRSAAE--FQAFHRPRVEALLDAGADLLAC 169
Query: 428 ETIP--AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ 485
ET+P AE +ALA LL+E+P +AW SF+ +D H S G + V + L NP Q+
Sbjct: 170 ETLPSFAEIQALAAXXLLQEYPRARAWYSFTLRDAEHLSDGTPLRE-VMAALADNP-QVV 227
Query: 486 AIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVP 544
A+G+NC+ + + + S + +VYPN G +D+V W E S+ Y+P
Sbjct: 228 AVGINCIALENTPAALAHL-HSLTALPLVVYPNSGEHYDAVSKTWHHHGEACASLADYLP 286
Query: 545 QWLEEGVNIIGGCCEVTSYEIQQM 568
QWL G +IGGCC T +I +
Sbjct: 287 QWLAAGAKLIGGCCRTTPKDIAAL 310
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 132/260 (50%), Gaps = 20/260 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L P+ + H D+ RAGA + ++ YQA
Sbjct: 18 LLDGAMATELEARGCDLADS--LWSAKVLLENPQLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 69 DN--LTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
G E ++ L+ KSV+L A++ N G + A S+GP
Sbjct: 76 AGXXFAARGLDEAQSRALIGKSVELARKAREAYLAE---------NPQAGTLLVAGSVGP 126
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP--AEKEALALV 184
YG L DGSEY G Y S E A+HRP VEAL+ AG D LA ET+P AE +ALA
Sbjct: 127 YGAFLADGSEYRGDYQRSAAE--FQAFHRPRVEALLDAGADLLACETLPSFAEIQALAAX 184
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
LL+E+P +AW SF+ +D H S G + V + L NP Q+ A+G+NC+ +
Sbjct: 185 XLLQEYPRARAWYSFTLRDAEHLSDGTPLRE-VMAALADNP-QVVAVGINCIALENTPAA 242
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
+ + S + +VYPN G
Sbjct: 243 LAHL-HSLTALPLVVYPNSG 261
>gi|384420009|ref|YP_005629369.1| homocysteine S-methyltransferase [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|353462922|gb|AEQ97201.1| homocysteine S-methyltransferase [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 321
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 154/315 (48%), Gaps = 28/315 (8%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
V + G LLDG+ +++ D LWS+ L +PE + HRD+ + A
Sbjct: 17 VLQHDGCVLLDGALATELEHRGCDLNDA--LWSARVLIEQPELIYQVHRDYFAAGAQCAI 74
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAA 378
+ T L ++ +D LIA +VE V+A D+L + + A
Sbjct: 75 TASYQATPL----GFAARGLDVAQSQALIA---RSVELAVQARADHLHVQPQAAPLWVAG 127
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG L DGSEY G Y+ + A L+ +HRP + AL AGVD LA ET+P+ E +A
Sbjct: 128 SVGPYGAYLADGSEYRGDYI--LPIAQLMDFHRPRIAALADAGVDVLACETLPSASEIVA 185
Query: 439 LVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
L +LL+ EFP AW SF+ +D H S G ++ V + L Q+ A+G+NC+ V
Sbjct: 186 LRQLLQNEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LDACRQVIAVGINCIALDQV 243
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-------LDTEDEYSILHYVPQWLEEG 550
+ + + + +VYPN G +D+ +W L D+++ WL G
Sbjct: 244 TAALHSLS-VLTALPLVVYPNSGEHYDASDKRWHAGHASALTLADQHA------HWLAAG 296
Query: 551 VNIIGGCCEVTSYEI 565
+IGGCC T +I
Sbjct: 297 ARLIGGCCRTTPRDI 311
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 130/258 (50%), Gaps = 19/258 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L +PE + HRD+ AGA ++ YQA
Sbjct: 25 LLDGALATELEHRGCDLNDA--LWSARVLIEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASIGPY 127
G ++ L+ +SV+L A+ D + P + A S+GPY
Sbjct: 83 LGFAARGLDVAQSQALIARSVELAVQARADHLHVQPQ----------AAPLWVAGSVGPY 132
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y+ + A L+ +HRP + AL AGVD LA ET+P+ E +AL +LL
Sbjct: 133 GAYLADGSEYRGDYI--LPIAQLMDFHRPRIAALADAGVDVLACETLPSASEIVALRQLL 190
Query: 188 R-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+ EFP AW SF+ +D H S G ++ V + L Q+ A+G+NC+ V+ +
Sbjct: 191 QNEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LDACRQVIAVGINCIALDQVTAALH 248
Query: 247 CIKQSHPTVQTIVYPNKG 264
+ + +VYPN G
Sbjct: 249 SLS-VLTALPLVVYPNSG 265
>gi|440730685|ref|ZP_20910759.1| homocysteine methyltransferase [Xanthomonas translucens DAR61454]
gi|440377707|gb|ELQ14349.1| homocysteine methyltransferase [Xanthomonas translucens DAR61454]
Length = 312
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 154/321 (47%), Gaps = 31/321 (9%)
Query: 257 TIVYPNKGVKLLDGSFTSQVSRHTIKDVD-GHPLWSSVYLTTEPEACVETHRDFIRGHIE 315
T + ++ +LDG+ +++ + D G LWS+ L +P+ + H D+ +
Sbjct: 2 TALLADQRCIVLDGALATELE---ARGCDLGDALWSAKVLLEQPQLIRQVHLDYFEAGAQ 58
Query: 316 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ 375
A + T L ++ +D LIA + + + A Y A+ + +
Sbjct: 59 CAITASYQATPL----GFAARGLDLAQSQQLIA---RSAQLALEARDAYRAMHADAGALL 111
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
A S+GPYG L DGSEY G Y ++ +A ++ +HRP + ALV AGVD LA ET P+ E
Sbjct: 112 VAGSVGPYGAYLADGSEYRGDY--ALPQAQMLDFHRPRIAALVEAGVDLLACETQPSAAE 169
Query: 436 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP- 494
+AL+ LL+EFP AW SF+ +D H S G + V L Q+ A+GVNC+ P
Sbjct: 170 IVALLALLQEFPQSTAWFSFTLRDAMHLSDGTPLREVVAR--LDGHPQVVALGVNCIAPE 227
Query: 495 ------SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDT-EDEYSILHYVPQWL 547
H++TL R + +VYPN G +D+ W D ++ V W
Sbjct: 228 LGSAALQHLATLTR--------LPLVVYPNSGEHYDAAVKHWDGAGADACGLVDRVDAWR 279
Query: 548 EEGVNIIGGCCEVTSYEIQQM 568
G +IGGCC T I Q+
Sbjct: 280 AAGARLIGGCCRTTPRAIAQL 300
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 134/267 (50%), Gaps = 32/267 (11%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD-GHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
+ +LDG+ +++ + D G LWS+ L +P+ + H D+ AGA ++ Y
Sbjct: 9 RCIVLDGALATELE---ARGCDLGDALWSAKVLLEQPQLIRQVHLDYFEAGAQCAITASY 65
Query: 65 QANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
QA G ++ L+ +S QL A+D + + G + A S+
Sbjct: 66 QATPLGFAARGLDLAQSQQLIARSAQLALEARDA---------YRAMHADAGALLVAGSV 116
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSEY G Y ++ +A ++ +HRP + ALV AGVD LA ET P+ E +AL+
Sbjct: 117 GPYGAYLADGSEYRGDY--ALPQAQMLDFHRPRIAALVEAGVDLLACETQPSAAEIVALL 174
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP------ 238
LL+EFP AW SF+ +D H S G + V L Q+ A+GVNC+ P
Sbjct: 175 ALLQEFPQSTAWFSFTLRDAMHLSDGTPLREVVAR--LDGHPQVVALGVNCIAPELGSAA 232
Query: 239 -SHVSTLVRCIKQSHPTVQTIVYPNKG 264
H++TL R + +VYPN G
Sbjct: 233 LQHLATLTR--------LPLVVYPNSG 251
>gi|84623485|ref|YP_450857.1| homocysteine methyltransferase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84367425|dbj|BAE68583.1| homocysteine S-methyltransferase [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length = 325
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 153/312 (49%), Gaps = 28/312 (8%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
+ G LLDG+ +++ D LWS+ L +PE + HRD+ + A +
Sbjct: 20 HDGCVLLDGALATELEHRGCDLNDA--LWSARVLIEQPELIYQVHRDYFAAGAQCAITAS 77
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
T L ++ +D LIA +VE V+A D+L + A S+G
Sbjct: 78 YQATPL----GFAARGLDVAQSQALIA---RSVELAVQARADHLHAQPQAAPLWVAGSVG 130
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG L DGSEY G YV + A L+ +HRP + AL AGVD LA ET+P+ E +AL +
Sbjct: 131 PYGAYLADGSEYRGDYV--LPIAQLMDFHRPRIAALADAGVDVLACETLPSASEIVALRQ 188
Query: 442 LLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 500
LL+ EFP AW SF+ +D H S G ++ V + L Q+ A+G+NC+ V+
Sbjct: 189 LLQSEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LDACTQVIAVGINCIALDQVTAA 246
Query: 501 VRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-------LDTEDEYSILHYVPQWLEEGVNI 553
+ + + + +VYPN G +D+ +W L D+++ WL G +
Sbjct: 247 LHSLS-ALTALPLVVYPNSGEHYDASDKRWHAGHASGLTLADQHA------HWLAAGARL 299
Query: 554 IGGCCEVTSYEI 565
IGGCC T +I
Sbjct: 300 IGGCCRTTPRDI 311
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 131/258 (50%), Gaps = 19/258 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ D LWS+ L +PE + HRD+ AGA ++ YQA
Sbjct: 25 LLDGALATELEHRGCDLNDA--LWSARVLIEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASIGPY 127
G ++ L+ +SV+L A+ D + P + A S+GPY
Sbjct: 83 LGFAARGLDVAQSQALIARSVELAVQARADHLHAQPQ----------AAPLWVAGSVGPY 132
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G YV + A L+ +HRP + AL AGVD LA ET+P+ E +AL +LL
Sbjct: 133 GAYLADGSEYRGDYV--LPIAQLMDFHRPRIAALADAGVDVLACETLPSASEIVALRQLL 190
Query: 188 R-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+ EFP AW SF+ +D H S G ++ V + L Q+ A+G+NC+ V+ +
Sbjct: 191 QSEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LDACTQVIAVGINCIALDQVTAALH 248
Query: 247 CIKQSHPTVQTIVYPNKG 264
+ + + +VYPN G
Sbjct: 249 SLS-ALTALPLVVYPNSG 265
>gi|433460739|ref|ZP_20418363.1| homocysteine methyltransferase [Halobacillus sp. BAB-2008]
gi|432191087|gb|ELK48068.1| homocysteine methyltransferase [Halobacillus sp. BAB-2008]
Length = 290
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 129/235 (54%), Gaps = 14/235 (5%)
Query: 30 PLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSV 89
PLWS+ L P+A + H D+ R GADI ++ YQA +D + G E +A L+ +V
Sbjct: 15 PLWSARVLLENPDAIRKVHADYFRNGADIAITASYQATIDGFKQRGIDEDKARTLIKDTV 74
Query: 90 QLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD 149
+L A+ + D ++ + ++ G S+GPYG L DGSEY G+Y +T+
Sbjct: 75 RLAQEARSDVWREAD---DRAYPVVAG------SVGPYGAYLADGSEYIGNY--GVTDER 123
Query: 150 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSH 209
L +HRP +EAL+ AG D LA ETIP+ +EA L +LL E+PG AWLSFS K+ + S
Sbjct: 124 LKEFHRPRIEALIEAGADVLAFETIPSLQEAEVLTELLGEYPGASAWLSFSLKNGSQISD 183
Query: 210 GELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
G + ++ +Q+ A+GVNC + V I+ + I+YPN G
Sbjct: 184 GTEWRRCID--VIEGREQVVAVGVNCAPIPDATEAVGHIR-ALTDKPIILYPNSG 235
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 133/281 (47%), Gaps = 12/281 (4%)
Query: 288 PLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLI 347
PLWS+ L P+A + H D+ R + A + T+ DG + G +D LI
Sbjct: 15 PLWSARVLLENPDAIRKVHADYFRNGADIAITASYQATI--DGFKQRG--IDEDKARTLI 70
Query: 348 AWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLI 407
+ V A D A S+GPYG L DGSEY G+Y +T+ L
Sbjct: 71 ---KDTVRLAQEARSDVWREADDRAYPVVAGSVGPYGAYLADGSEYIGNY--GVTDERLK 125
Query: 408 AWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGE 467
+HRP +EAL+ AG D LA ETIP+ +EA L +LL E+PG AWLSFS K+ + S G
Sbjct: 126 EFHRPRIEALIEAGADVLAFETIPSLQEAEVLTELLGEYPGASAWLSFSLKNGSQISDGT 185
Query: 468 LISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVH 527
+ ++ +Q+ A+GVNC + V I+ + I+YPN G +D
Sbjct: 186 EWRRCID--VIEGREQVVAVGVNCAPIPDATEAVGHIR-ALTDKPIILYPNSGETYDPDT 242
Query: 528 MKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
W +W+E G IIGGCC T IQ +
Sbjct: 243 NDWYGERSCQRFDEQSDRWVEAGATIIGGCCRTTPDHIQSL 283
>gi|357235744|ref|ZP_09123087.1| homocysteine S-methyltransferase [Streptococcus criceti HS-6]
gi|356883726|gb|EHI73926.1| homocysteine S-methyltransferase [Streptococcus criceti HS-6]
Length = 315
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 145/250 (58%), Gaps = 15/250 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL +P+A + H ++RAG+DI+ ++ YQA + L + G SE+EA +
Sbjct: 30 DVSGK-LWSAKYLLEDPQAIQDIHETYLRAGSDIVTTASYQATLPGLEEYGLSEEEAKAV 88
Query: 85 LHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV 142
+ +V + +A+D+ + + + L++G IGPY L DGSEY+G Y
Sbjct: 89 IASTVSIAKAARDQVWSELAGEEQAKRPYPLISG------DIGPYAAYLADGSEYTGAY- 141
Query: 143 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-REFPGQKAWLSFSC 201
S+T+ +L+ +HRP + L GVD LALETIP E ALV LL EFPG +A++SF+
Sbjct: 142 GSVTKKELMDFHRPRIAILQDQGVDLLALETIPNLLEVQALVDLLASEFPGMEAYMSFTS 201
Query: 202 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 261
+D S G I A + L+ + QI A+G+NC PS + ++ ++ ++ + YP
Sbjct: 202 QDGLSISDGTPI--AEVAPLVDDSRQILALGLNCSSPSVYPSFLQGLR-NYSQKPLVTYP 258
Query: 262 NKGVKLLDGS 271
N G ++ DG+
Sbjct: 259 NSG-EVYDGA 267
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/295 (34%), Positives = 147/295 (49%), Gaps = 27/295 (9%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAASIGPYGTVLRDGSEYSGHYVDS 340
DV G LWS+ YL +P+A + H ++R I T AS Y L EY S
Sbjct: 30 DVSGK-LWSAKYLLEDPQAIQDIHETYLRAGSDIVTTAS---YQATLPGLEEYG----LS 81
Query: 341 MTEADLIAWHRPNVEALVR-------AGVDYLALIKPSISSQTAASIGPYGTVLRDGSEY 393
EA + ++ R AG + P IS IGPY L DGSEY
Sbjct: 82 EEEAKAVIASTVSIAKAARDQVWSELAGEEQAKRPYPLIS----GDIGPYAAYLADGSEY 137
Query: 394 SGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-REFPGQKAW 452
+G Y S+T+ +L+ +HRP + L GVD LALETIP E ALV LL EFPG +A+
Sbjct: 138 TGAY-GSVTKKELMDFHRPRIAILQDQGVDLLALETIPNLLEVQALVDLLASEFPGMEAY 196
Query: 453 LSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQ 512
+SF+ +D S G I A + L+ + QI A+G+NC PS + ++ ++ ++
Sbjct: 197 MSFTSQDGLSISDGTPI--AEVAPLVDDSRQILALGLNCSSPSVYPSFLQGLR-NYSQKP 253
Query: 513 TIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQ 566
+ YPN G V+D W D + +++L +W + G ++GGCC +IQ
Sbjct: 254 LVTYPNSGEVYDGASQTWTKDPDHSHTLLENTLEWQKLGAKVVGGCCRTRPSDIQ 308
>gi|372276990|ref|ZP_09513026.1| homocysteine methyltransferase [Pantoea sp. SL1_M5]
gi|390437447|ref|ZP_10225985.1| homocysteine methyltransferase [Pantoea agglomerans IG1]
Length = 311
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 154/303 (50%), Gaps = 22/303 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFI----RGHIETAASIGP 322
+LDG+ +++ D LWS+ L PE + H D+ R I + P
Sbjct: 17 ILDGALATELEARGCHLADA--LWSAKVLMENPELIYQVHYDYFVAGARCAITASYQATP 74
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
G R + EA+ +A +VE RA DYLA+ + + A S+GP
Sbjct: 75 QGFATR-----------GLDEAESLALIAQSVELARRARHDYLAVRPDAKTLLVAGSVGP 123
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY G Y ++ EA+++A+HRP V+AL+ AG D LA ET+P+ EA ALVKL
Sbjct: 124 YGAFLADGSEYRGDY--ALPEAEMMAFHRPRVQALLAAGADLLACETLPSFAEAQALVKL 181
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
L EFP +AW SF+ +D H S G +S V+ L Q+ A+G+NCV V+ ++
Sbjct: 182 LAEFPEGRAWFSFTLRDAGHISDGTPLSDVVS--WLNQQPQVVAVGINCVALESVTPALQ 239
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTS 562
+ Q +VYPN G +D+ W ++ + +W + G +IGGCC +
Sbjct: 240 QL-QKLTDKPLVVYPNSGEQYDASSKTWHSAPSGCTLHDKLAEWQQAGAKLIGGCCRTSP 298
Query: 563 YEI 565
+I
Sbjct: 299 NDI 301
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/257 (38%), Positives = 137/257 (53%), Gaps = 18/257 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE + H D+ AGA ++ YQA
Sbjct: 17 ILDGALATELEARGCHLADA--LWSAKVLMENPELIYQVHYDYFVAGARCAITASYQATP 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASIGPY 127
G E E+L L+ +SV+L A+ D PD LL A S+GPY
Sbjct: 75 QGFATRGLDEAESLALIAQSVELARRARHDYLAVRPDAK-----TLLV-----AGSVGPY 124
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y ++ EA+++A+HRP V+AL+ AG D LA ET+P+ EA ALVKLL
Sbjct: 125 GAFLADGSEYRGDY--ALPEAEMMAFHRPRVQALLAAGADLLACETLPSFAEAQALVKLL 182
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP +AW SF+ +D H S G +S V+ L Q+ A+G+NCV V+ ++
Sbjct: 183 AEFPEGRAWFSFTLRDAGHISDGTPLSDVVS--WLNQQPQVVAVGINCVALESVTPALQQ 240
Query: 248 IKQSHPTVQTIVYPNKG 264
+ Q +VYPN G
Sbjct: 241 L-QKLTDKPLVVYPNSG 256
>gi|296110581|ref|YP_003620962.1| YbgG [Leuconostoc kimchii IMSNU 11154]
gi|295832112|gb|ADG39993.1| YbgG [Leuconostoc kimchii IMSNU 11154]
Length = 306
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/284 (36%), Positives = 153/284 (53%), Gaps = 24/284 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG S++ + I DV+ + WS+ L PE E H+++ +GAD+ + YQA+V
Sbjct: 14 ILDGGMGSELEKRQI-DVN-NSWWSASALIQSPEDVREIHKNYFDSGADLAITDTYQAHV 71
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ T G SEQ+A +L+ +V L N++ + A S+GPYG
Sbjct: 72 KSFTDQGLSEQKAYELIDSAVALAKLGLTDSNRSDGL--------------IAGSVGPYG 117
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL- 187
L +G+EY+G Y ++E + A+HRP + L+ GVD LALETIP +EA AL LL
Sbjct: 118 AYLANGAEYTGDY--HLSEFEFQAFHRPRIVRLIDDGVDVLALETIPNFEEAKALGHLLQ 175
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
+EFP A+LSFS ++ H G +S AV + QI+AIGVNC P ++ ++
Sbjct: 176 QEFPTVNAYLSFSTENGDHLWDGTRLSEAV--AYFESISQIKAIGVNCTAPQNILPAIKN 233
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRH-TIKDVDGHPLW 290
I + + + IVYPN G + D VS+H IK + PLW
Sbjct: 234 IT-PNTSKKIIVYPNAGDE-YDPETKRWVSQHGPIKWDELVPLW 275
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 154/316 (48%), Gaps = 32/316 (10%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
Y G +LDG S++ + I DV+ + WS+ L PE E H+++ + A +
Sbjct: 7 YIESGTVILDGGMGSELEKRQI-DVN-NSWWSASALIQSPEDVREIHKNYFDSGADLAIT 64
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT--- 376
Y H V S T+ L L+ + V AL K ++
Sbjct: 65 -----------DTYQAH-VKSFTDQGL---SEQKAYELIDSAV---ALAKLGLTDSNRSD 106
Query: 377 ---AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
A S+GPYG L +G+EY+G Y ++E + A+HRP + L+ GVD LALETIP
Sbjct: 107 GLIAGSVGPYGAYLANGAEYTGDY--HLSEFEFQAFHRPRIVRLIDDGVDVLALETIPNF 164
Query: 434 KEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 492
+EA AL LL+ EFP A+LSFS ++ H G +S AV + QI+AIGVNC
Sbjct: 165 EEAKALGHLLQQEFPTVNAYLSFSTENGDHLWDGTRLSEAV--AYFESISQIKAIGVNCT 222
Query: 493 RPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552
P ++ ++ I + + + IVYPN G +D +W+ VP W E G N
Sbjct: 223 APQNILPAIKNIT-PNTSKKIIVYPNAGDEYDPETKRWVSQHGPIKWDELVPLWQEAGAN 281
Query: 553 IIGGCCEVTSYEIQQM 568
+IGGCC + +I +
Sbjct: 282 LIGGCCRTSPDDINDI 297
>gi|429735732|ref|ZP_19269663.1| homocysteine S-methyltransferase [Selenomonas sp. oral taxon 138
str. F0429]
gi|429157080|gb|EKX99687.1| homocysteine S-methyltransferase [Selenomonas sp. oral taxon 138
str. F0429]
Length = 310
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 137/261 (52%), Gaps = 20/261 (7%)
Query: 7 VKLLDGSFTSQVSRH--TIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
V +LDG+F +++ ++ DV LWS+ L P+ + H D++RAGA+++ S+ Y
Sbjct: 13 VIVLDGAFATELEARGFSVNDV----LWSAKALFERPDLVRDVHLDYLRAGANVVTSASY 68
Query: 65 QANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
QA V K G+SE EA+ LL KSV L A+D + ++ L+ AAS+
Sbjct: 69 QATVAGFMKRGFSEAEAVALLQKSVHLAQEARDL--YLAEHGTHEPAPLV------AASV 120
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GP+G L DGSEY G Y + E L +H + L A D LA ET+P EA ALV
Sbjct: 121 GPFGAYLADGSEYRGDY--DVDEDALTEFHAGRLRVLAAAQPDLLACETLPCLIEARALV 178
Query: 185 KLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
+ LRE + AW SFSC+D H S G I+ L + AIG+NC P +V
Sbjct: 179 RALREEKIRIPAWFSFSCRDAAHISDGTEIAECAR--YLDGVPEAAAIGLNCTAPQYVEE 236
Query: 244 LVRCIKQSHPTVQTIVYPNKG 264
L+R I Q +VYPN G
Sbjct: 237 LIRTIHQ-ETAKPVVVYPNSG 256
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 146/310 (47%), Gaps = 26/310 (8%)
Query: 265 VKLLDGSFTSQVSRH--TIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
V +LDG+F +++ ++ DV LWS+ L P+ + H D++R S
Sbjct: 13 VIVLDGAFATELEARGFSVNDV----LWSAKALFERPDLVRDVHLDYLRAGANVVTSASY 68
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA---LIKPSISSQTAAS 379
TV +G +EA+ +A + +V A YLA +P+ AAS
Sbjct: 69 QATV-------AGFMKRGFSEAEAVALLQKSVHLAQEARDLYLAEHGTHEPA--PLVAAS 119
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
+GP+G L DGSEY G Y + E L +H + L A D LA ET+P EA AL
Sbjct: 120 VGPFGAYLADGSEYRGDY--DVDEDALTEFHAGRLRVLAAAQPDLLACETLPCLIEARAL 177
Query: 440 VKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
V+ LRE + AW SFSC+D H S G I+ L + AIG+NC P +V
Sbjct: 178 VRALREEKIRIPAWFSFSCRDAAHISDGTEIAECAR--YLDGVPEAAAIGLNCTAPQYVE 235
Query: 499 TLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
L+R I Q +VYPN G +D+ W +++ L +W G +IGGCC
Sbjct: 236 ELIRTIHQ-ETAKPVVVYPNSGESYDASDKTWHGAAEDFGAL--ARRWRSAGARLIGGCC 292
Query: 559 EVTSYEIQQM 568
+ EI ++
Sbjct: 293 RTSPREIAEI 302
>gi|339490325|ref|YP_004704830.1| homocysteine methyltransferase [Leuconostoc sp. C2]
gi|338851997|gb|AEJ30207.1| homocysteine methyltransferase [Leuconostoc sp. C2]
Length = 306
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/284 (36%), Positives = 153/284 (53%), Gaps = 24/284 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG S++ + I DV+ + WS+ L PE E H+++ +GAD+ + YQA+V
Sbjct: 14 ILDGGMGSELEKRQI-DVN-NSWWSASALIQSPEDVREIHKNYFDSGADLAITDTYQAHV 71
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ T G SEQ+A +L+ +V L N++ + A S+GPYG
Sbjct: 72 KSFTDQGLSEQKAYELIDSAVALAKLGLTDSNRSDGL--------------IAGSVGPYG 117
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL- 187
L +G+EY+G Y ++E + A+HRP + L+ GVD LALETIP +EA AL LL
Sbjct: 118 AYLANGAEYTGDY--HLSEFEFQAFHRPRIVRLIDDGVDVLALETIPNFEEAKALGHLLQ 175
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
+EFP A+LSFS ++ H G +S AV + QI+AIGVNC P ++ ++
Sbjct: 176 QEFPTVNAYLSFSTENGDHLWDGTRLSEAV--AYFESISQIKAIGVNCTAPQNILPAIKN 233
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRH-TIKDVDGHPLW 290
I + + + IVYPN G + D VS+H IK + PLW
Sbjct: 234 IT-PNTSKKIIVYPNAGDE-YDPETKRWVSQHGPIKWDELVPLW 275
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 154/316 (48%), Gaps = 32/316 (10%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
Y G +LDG S++ + I DV+ + WS+ L PE E H+++ + A +
Sbjct: 7 YTESGTVILDGGMGSELEKRQI-DVN-NSWWSASALIQSPEDVREIHKNYFDSGADLAIT 64
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT--- 376
Y H V S T+ L L+ + V AL K ++
Sbjct: 65 -----------DTYQAH-VKSFTDQGL---SEQKAYELIDSAV---ALAKLGLTDSNRSD 106
Query: 377 ---AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
A S+GPYG L +G+EY+G Y ++E + A+HRP + L+ GVD LALETIP
Sbjct: 107 GLIAGSVGPYGAYLANGAEYTGDY--HLSEFEFQAFHRPRIVRLIDDGVDVLALETIPNF 164
Query: 434 KEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 492
+EA AL LL+ EFP A+LSFS ++ H G +S AV + QI+AIGVNC
Sbjct: 165 EEAKALGHLLQQEFPTVNAYLSFSTENGDHLWDGTRLSEAV--AYFESISQIKAIGVNCT 222
Query: 493 RPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552
P ++ ++ I + + + IVYPN G +D +W+ VP W E G N
Sbjct: 223 APQNILPAIKNIT-PNTSKKIIVYPNAGDEYDPETKRWVSQHGPIKWDELVPLWQEAGAN 281
Query: 553 IIGGCCEVTSYEIQQM 568
+IGGCC + +I +
Sbjct: 282 LIGGCCRTSPDDINDI 297
>gi|302792559|ref|XP_002978045.1| hypothetical protein SELMODRAFT_108383 [Selaginella moellendorffii]
gi|300154066|gb|EFJ20702.1| hypothetical protein SELMODRAFT_108383 [Selaginella moellendorffii]
Length = 330
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 149/288 (51%), Gaps = 27/288 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +Q+ H D++ PLWS++ L T P+ + H D++ AGADI+ SS YQA V
Sbjct: 20 VLDGGLATQL-EHCGADLN-DPLWSALCLITRPQLIQKVHWDYLEAGADILVSSSYQATV 77
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK-------ENQTPDINLNKTFNLLTGHIETA 121
G SE+E ++L KSV + +DK N + +I N+ A
Sbjct: 78 QGFVSKGLSEKEGEEMLKKSVAIACQVRDKFWDKVKQNNSSGEIRYNRAL--------VA 129
Query: 122 ASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 180
ASIG YG L DGSEYSG Y + M A L +HR ++ L +G D LA+ETIP + EA
Sbjct: 130 ASIGSYGAYLADGSEYSGQYGPEMMNVAKLKGFHRRRLQILASSGADLLAIETIPCQVEA 189
Query: 181 LALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 239
ALV+LL E Q +W+SF+ KD + G+ +S V A ++ A+G+NC P
Sbjct: 190 QALVELLEEEDIQIPSWISFNSKDGANVVSGDPLSECVAL--AAKSAKVAAVGINCTPPR 247
Query: 240 HVSTLVRCIKQ--SHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD 285
+ LV ++ P V VYPN G + D + + DVD
Sbjct: 248 FIHGLVSTARKVTDKPIV---VYPNSG-ETFDPDAKQWIPATGVSDVD 291
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 159/329 (48%), Gaps = 28/329 (8%)
Query: 255 VQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHI 314
++ ++ + G +LDG +Q+ H D++ PLWS++ L T P+ + H D++
Sbjct: 8 LEELLESSGGCAVLDGGLATQL-EHCGADLN-DPLWSALCLITRPQLIQKVHWDYLEAGA 65
Query: 315 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISS 374
+ S TV G ++E + + +V + + +K + SS
Sbjct: 66 DILVSSSYQATV-------QGFVSKGLSEKEGEEMLKKSVAIACQVRDKFWDKVKQNNSS 118
Query: 375 Q--------TAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYL 425
AASIG YG L DGSEYSG Y + M A L +HR ++ L +G D L
Sbjct: 119 GEIRYNRALVAASIGSYGAYLADGSEYSGQYGPEMMNVAKLKGFHRRRLQILASSGADLL 178
Query: 426 ALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 484
A+ETIP + EA ALV+LL E Q +W+SF+ KD + G+ +S V A ++
Sbjct: 179 AIETIPCQVEAQALVELLEEEDIQIPSWISFNSKDGANVVSGDPLSECVAL--AAKSAKV 236
Query: 485 QAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTE--DEYSIL 540
A+G+NC P + LV ++ P V VYPN G +D +W+ + +
Sbjct: 237 AAVGINCTPPRFIHGLVSTARKVTDKPIV---VYPNSGETFDPDAKQWIPATGVSDVDFV 293
Query: 541 HYVPQWLEEGVNIIGGCCEVTSYEIQQMR 569
YV +W + G ++IGGCC T I+ ++
Sbjct: 294 SYVGEWKKAGASLIGGCCRTTPATIRAIK 322
>gi|302766551|ref|XP_002966696.1| hypothetical protein SELMODRAFT_168384 [Selaginella moellendorffii]
gi|300166116|gb|EFJ32723.1| hypothetical protein SELMODRAFT_168384 [Selaginella moellendorffii]
Length = 327
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 149/288 (51%), Gaps = 27/288 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +Q+ H D++ PLWS++ L T P+ + H D++ AGADI+ SS YQA V
Sbjct: 20 VLDGGLATQL-EHCGADLN-DPLWSALCLITRPQLIQKVHWDYLEAGADILVSSSYQATV 77
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK-------ENQTPDINLNKTFNLLTGHIETA 121
G SE+E ++L KSV + +DK N + +I N+ A
Sbjct: 78 QGFVSKGLSEKEGEEMLKKSVAIACQVRDKFWDKVKQNNSSGEIRYNRAL--------VA 129
Query: 122 ASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 180
ASIG YG L DGSEYSG Y + M A L +HR ++ L +G D LA+ETIP + EA
Sbjct: 130 ASIGSYGAYLADGSEYSGQYGPEMMNVAKLKGFHRRRLQILASSGADLLAIETIPCQVEA 189
Query: 181 LALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 239
ALV+LL E Q +W+SF+ KD + G+ +S V A ++ A+G+NC P
Sbjct: 190 QALVELLEEEDIQIPSWISFNSKDGANVVSGDPLSECVAL--AAKSAKVAAVGINCTPPR 247
Query: 240 HVSTLVRCIKQ--SHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD 285
+ LV ++ P V VYPN G + D + + DVD
Sbjct: 248 FIHGLVSTARKVTDKPIV---VYPNSG-ETFDPDAKQWIPSTGVSDVD 291
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 160/329 (48%), Gaps = 28/329 (8%)
Query: 255 VQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHI 314
++ ++ + G +LDG +Q+ H D++ PLWS++ L T P+ + H D++
Sbjct: 8 LEELLESSGGCAVLDGGLATQL-EHCGADLN-DPLWSALCLITRPQLIQKVHWDYLEAGA 65
Query: 315 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISS 374
+ S TV G ++E + + +V + + +K + SS
Sbjct: 66 DILVSSSYQATV-------QGFVSKGLSEKEGEEMLKKSVAIACQVRDKFWDKVKQNNSS 118
Query: 375 Q--------TAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYL 425
AASIG YG L DGSEYSG Y + M A L +HR ++ L +G D L
Sbjct: 119 GEIRYNRALVAASIGSYGAYLADGSEYSGQYGPEMMNVAKLKGFHRRRLQILASSGADLL 178
Query: 426 ALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 484
A+ETIP + EA ALV+LL E Q +W+SF+ KD + G+ +S V A ++
Sbjct: 179 AIETIPCQVEAQALVELLEEEDIQIPSWISFNSKDGANVVSGDPLSECVAL--AAKSAKV 236
Query: 485 QAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTE--DEYSIL 540
A+G+NC P + LV ++ P V VYPN G +D +W+ + + +
Sbjct: 237 AAVGINCTPPRFIHGLVSTARKVTDKPIV---VYPNSGETFDPDAKQWIPSTGVSDVDFV 293
Query: 541 HYVPQWLEEGVNIIGGCCEVTSYEIQQMR 569
YV +W + G ++IGGCC T I+ ++
Sbjct: 294 SYVGEWKKAGASLIGGCCRTTPATIRAIK 322
>gi|15827776|ref|NP_302039.1| homocysteine methyltransferase [Mycobacterium leprae TN]
gi|221230253|ref|YP_002503669.1| homocysteine methyltransferase [Mycobacterium leprae Br4923]
gi|13093328|emb|CAC30428.1| possible transferase [Mycobacterium leprae]
gi|219933360|emb|CAR71572.1| possible transferase [Mycobacterium leprae Br4923]
Length = 293
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 123/235 (52%), Gaps = 23/235 (9%)
Query: 30 PLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSV 89
PLWS+ LT P+ V H + RAGA I + YQA+ + G +A+ L+ +SV
Sbjct: 31 PLWSARLLTDAPQEIVAVHVAYFRAGATIATTVSYQASFEGFAARGIGRDQAIRLMRRSV 90
Query: 90 QLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD 149
L ++A+D+ + G + AAS+GPYG L DGSEY G Y ++ A
Sbjct: 91 ALASAARDE--------------ISAGGLCVAASVGPYGAALADGSEYRGRY--GLSVAA 134
Query: 150 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSH 209
L WHRP +E L AG D LALETIP EA ALV L+R G AWLS++ + T T
Sbjct: 135 LARWHRPRLEVLADAGADVLALETIPDIDEAEALVDLVRSV-GVPAWLSYTI-NGTRTRA 192
Query: 210 GELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
G+ ++ A + A +I A+GVNC P V ++ P IVYPN G
Sbjct: 193 GQPLAEAFA--VAAGVPKIVAVGVNCCAPDDVLAAIQIANIGKP---IIVYPNSG 242
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 132/281 (46%), Gaps = 25/281 (8%)
Query: 288 PLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLI 347
PLWS+ LT P+ V H + R A T + + + G + I
Sbjct: 31 PLWSARLLTDAPQEIVAVHVAYFRAGATIA-------TTVSYQASFEGFAARGIGRDQAI 83
Query: 348 AWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLI 407
R +V AL A D ++ + AAS+GPYG L DGSEY G Y ++ A L
Sbjct: 84 RLMRRSV-ALASAARDEISAGGLCV----AASVGPYGAALADGSEYRGRY--GLSVAALA 136
Query: 408 AWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGE 467
WHRP +E L AG D LALETIP EA ALV L+R G AWLS++ + T T G+
Sbjct: 137 RWHRPRLEVLADAGADVLALETIPDIDEAEALVDLVRSV-GVPAWLSYTI-NGTRTRAGQ 194
Query: 468 LISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVH 527
++ A + A +I A+GVNC P V ++ P IVYPN G WD +
Sbjct: 195 PLAEAFA--VAAGVPKIVAVGVNCCAPDDVLAAIQIANIGKP---IIVYPNSGERWD--Y 247
Query: 528 MKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
W + L QW G I+GGCC V +I ++
Sbjct: 248 RTWTGPRRFSAQLAL--QWTAAGARIVGGCCRVRPADIAEL 286
>gi|386822801|ref|ZP_10109997.1| homocysteine methyltransferase [Serratia plymuthica PRI-2C]
gi|386380275|gb|EIJ21016.1| homocysteine methyltransferase [Serratia plymuthica PRI-2C]
Length = 312
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 155/303 (51%), Gaps = 15/303 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D PLWS+ L PE + H D+ + A + T
Sbjct: 18 ILDGALATELEARGCDLSD--PLWSAKVLIENPELIYQVHLDYFNAGAQCAITASYQATP 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
L G + + +A +V+ +A DYLA + A S+GPYG
Sbjct: 76 L-------GFQRRGLNQQQSLALIAKSVQLAQQARSDYLAQHPQAAPLLIAGSVGPYGAY 128
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y S+ + ++IA+HRP + AL AGVD LA ET+P+ E AL+ LL+EF
Sbjct: 129 LADGSEYRGDY--SLPQEEMIAFHRPRIAALAEAGVDLLACETLPSFSELQALLALLQEF 186
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P AW +F+ +D H S G ++ V + L NP Q+ AIG+NC+ +V+ +R +
Sbjct: 187 PTLGAWFAFTLRDSQHLSDGTPLTQ-VLAALHGNP-QVLAIGINCIALENVTPALRQLA- 243
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNIIGGCCEVTSYEI 565
+ +VYPN G +D+V W E S++ + +W G +IGGCC T +I
Sbjct: 244 TLTDKPLLVYPNSGEHYDAVTKTWHACGSESGSLIEQIGEWQNVGARLIGGCCRTTPQDI 303
Query: 566 QQM 568
+Q+
Sbjct: 304 RQI 306
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/260 (36%), Positives = 140/260 (53%), Gaps = 18/260 (6%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ +LDG+ +++ D PLWS+ L PE + H D+ AGA ++ YQ
Sbjct: 15 RTLILDGALATELEARGCDLSD--PLWSAKVLIENPELIYQVHLDYFNAGAQCAITASYQ 72
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASI 124
A + G ++Q++L L+ KSVQL A+ D Q P + A S+
Sbjct: 73 ATPLGFQRRGLNQQQSLALIAKSVQLAQQARSDYLAQHPQ----------AAPLLIAGSV 122
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSEY G Y S+ + ++IA+HRP + AL AGVD LA ET+P+ E AL+
Sbjct: 123 GPYGAYLADGSEYRGDY--SLPQEEMIAFHRPRIAALAEAGVDLLACETLPSFSELQALL 180
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
LL+EFP AW +F+ +D H S G ++ V + L NP Q+ AIG+NC+ +V+
Sbjct: 181 ALLQEFPTLGAWFAFTLRDSQHLSDGTPLTQ-VLAALHGNP-QVLAIGINCIALENVTPA 238
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
+R + + +VYPN G
Sbjct: 239 LRQLA-TLTDKPLLVYPNSG 257
>gi|380511746|ref|ZP_09855153.1| homocysteine methyltransferase [Xanthomonas sacchari NCPPB 4393]
Length = 312
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 152/314 (48%), Gaps = 37/314 (11%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG----P 322
+LDG+ +++ R D PLWS+ L +P+ + HRD+ + A + P
Sbjct: 17 VLDGALATELERRGCDLRD--PLWSAKILLEQPDLIRQLHRDYFAAGAQCAITASYQATP 74
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
G R +D + LIA +VE +A +LA + A S+GP
Sbjct: 75 QGVAARG--------IDLVQAQRLIAR---SVELAQQARQAHLARHPQAGPLLVAGSVGP 123
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY G Y ++ +A L +HRP + LV AGVD L ET P+ E +AL+++
Sbjct: 124 YGAYLADGSEYRGDY--ALPQAALRDFHRPRIAVLVEAGVDLLTCETQPSLVEMVALLEV 181
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS------- 495
L FP AW + + +D TH S G + V LL Q+ A+GVNCV PS
Sbjct: 182 LEAFPQTVAWFTCTLRDATHLSDGTPLREVVA--LLDGHPQVVALGVNCVAPSLATVALR 239
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQWLEEGVNII 554
H++TL R V +VYPN G +D+ W + D ++ ++ W G +I
Sbjct: 240 HLATLTR--------VPLVVYPNAGERYDADRKCWQAGSADAGALADHLTAWRAAGARLI 291
Query: 555 GGCCEVTSYEIQQM 568
GGCC T +I Q+
Sbjct: 292 GGCCRTTPQDIAQL 305
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 135/268 (50%), Gaps = 30/268 (11%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ +LDG+ +++ R D PLWS+ L +P+ + HRD+ AGA ++ YQ
Sbjct: 14 RCLVLDGALATELERRGCDLRD--PLWSAKILLEQPDLIRQLHRDYFAAGAQCAITASYQ 71
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
A + G +A L+ +SV+L A+ + + G + A S+G
Sbjct: 72 ATPQGVAARGIDLVQAQRLIARSVELAQQARQA---------HLARHPQAGPLLVAGSVG 122
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY G Y ++ +A L +HRP + LV AGVD L ET P+ E +AL++
Sbjct: 123 PYGAYLADGSEYRGDY--ALPQAALRDFHRPRIAVLVEAGVDLLTCETQPSLVEMVALLE 180
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS------ 239
+L FP AW + + +D TH S G + V LL Q+ A+GVNCV PS
Sbjct: 181 VLEAFPQTVAWFTCTLRDATHLSDGTPLREVVA--LLDGHPQVVALGVNCVAPSLATVAL 238
Query: 240 -HVSTLVRCIKQSHPTVQTIVYPNKGVK 266
H++TL R V +VYPN G +
Sbjct: 239 RHLATLTR--------VPLVVYPNAGER 258
>gi|433631573|ref|YP_007265201.1| Homocysteine S-methyltransferase MmuM
(S-methylmethionine:homocysteine methyltransferase)
(cysteine methyltransferase) [Mycobacterium canettii
CIPT 140070010]
gi|432163166|emb|CCK60568.1| Homocysteine S-methyltransferase MmuM
(S-methylmethionine:homocysteine methyltransferase)
(cysteine methyltransferase) [Mycobacterium canettii
CIPT 140070010]
Length = 302
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/260 (36%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 7 VKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
V + DG +++ H + D PLWS+ L P A H + RAGA I ++ Y
Sbjct: 8 VLISDGGLATELEARGHDLSD----PLWSARLLVDAPHAITAVHTAYFRAGAQIATTASY 63
Query: 65 QANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
QA+ + G +A LL +SV+L +A+D+ G + AAS+
Sbjct: 64 QASFEGFAARGIGHDDATVLLRRSVELARAARDEVG--------------VGGLSVAASV 109
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSEY G Y ++ A L+ WH P +E LV AG D LALETIP EA ALV
Sbjct: 110 GPYGAALADGSEYRGRY--GLSVAALMKWHLPRLEVLVDAGADVLALETIPDIDEAEALV 167
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
L+R AWLS++ D T T G+ ++ A + A +I A+GVNC P V
Sbjct: 168 NLVRRL-ATPAWLSYTI-DGTRTRAGQPLTDAF--AVAAGVPEIVAVGVNCCPPDDVLPA 223
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
+ +H IVYPN G
Sbjct: 224 I-AFAVAHTGKPVIVYPNSG 242
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 142/307 (46%), Gaps = 26/307 (8%)
Query: 265 VKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
V + DG +++ H + D PLWS+ L P A H + R + A
Sbjct: 8 VLISDGGLATELEARGHDLSD----PLWSARLLVDAPHAITAVHTAYFRAGAQIA----- 58
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
T + + G + D R +VE L RA D + + S+ AAS+GP
Sbjct: 59 --TTASYQASFEGFAARGIGHDDATVLLRRSVE-LARAARDEVGVGGLSV----AASVGP 111
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY G Y ++ A L+ WH P +E LV AG D LALETIP EA ALV L
Sbjct: 112 YGAALADGSEYRGRY--GLSVAALMKWHLPRLEVLVDAGADVLALETIPDIDEAEALVNL 169
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
+R AWLS++ D T T G+ ++ A + A +I A+GVNC P V +
Sbjct: 170 VRRL-ATPAWLSYTI-DGTRTRAGQPLTDAF--AVAAGVPEIVAVGVNCCPPDDVLPAI- 224
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVT 561
+H IVYPN G WD W+ S +W+ G I+GGCC V
Sbjct: 225 AFAVAHTGKPVIVYPNSGEGWDGRRRAWVGPRRFSGSSGQLAREWVAAGARIVGGCCRVR 284
Query: 562 SYEIQQM 568
+I ++
Sbjct: 285 PVDIAEI 291
>gi|381403600|ref|ZP_09928284.1| homocysteine methyltransferase [Pantoea sp. Sc1]
gi|380736799|gb|EIB97862.1| homocysteine methyltransferase [Pantoea sp. Sc1]
Length = 311
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 157/303 (51%), Gaps = 22/303 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFI----RGHIETAASIGP 322
+LDG+ +++ + D LWS+ L +PE + H D+ R I + P
Sbjct: 17 ILDGALATELEARGCQLADA--LWSAKVLMEDPELIYQVHYDYFVAGARCAITASYQATP 74
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
G R ++E + +A +VE RA DYLA+ + + A S+GP
Sbjct: 75 QGFATR-----------GLSEDESLALIARSVELTQRARHDYLAVRPDAKTLLVAGSVGP 123
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY G Y ++ EA+++A+HRP V+AL+ AG D LA ET+P+ EA ALVKL
Sbjct: 124 YGAFLADGSEYRGDY--ALPEAEMMAFHRPRVQALLAAGADLLACETLPSFAEAQALVKL 181
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
L EFP +AW SF+ +D H S G ++ V+ L Q+ A+GVNCV V+ ++
Sbjct: 182 LAEFPDARAWFSFTLRDAGHISDGTPLAEVVS--WLNQQPQVVALGVNCVALESVTPALQ 239
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTS 562
+ Q+ +VYPN G +D+ W ++ + +W + G +IGGCC +
Sbjct: 240 QL-QTLTDKPLVVYPNSGEQYDAGSKTWHSAPSGCTLHDKLAEWQQAGARLIGGCCRTSP 298
Query: 563 YEI 565
+I
Sbjct: 299 GDI 301
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/266 (38%), Positives = 145/266 (54%), Gaps = 18/266 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + D LWS+ L +PE + H D+ AGA ++ YQA
Sbjct: 17 ILDGALATELEARGCQLADA--LWSAKVLMEDPELIYQVHYDYFVAGARCAITASYQATP 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASIGPY 127
G SE E+L L+ +SV+L A+ D PD LL A S+GPY
Sbjct: 75 QGFATRGLSEDESLALIARSVELTQRARHDYLAVRPDAK-----TLLV-----AGSVGPY 124
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y ++ EA+++A+HRP V+AL+ AG D LA ET+P+ EA ALVKLL
Sbjct: 125 GAFLADGSEYRGDY--ALPEAEMMAFHRPRVQALLAAGADLLACETLPSFAEAQALVKLL 182
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP +AW SF+ +D H S G ++ V+ L Q+ A+GVNCV V+ ++
Sbjct: 183 AEFPDARAWFSFTLRDAGHISDGTPLAEVVS--WLNQQPQVVALGVNCVALESVTPALQQ 240
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFT 273
+ Q+ +VYPN G + GS T
Sbjct: 241 L-QTLTDKPLVVYPNSGEQYDAGSKT 265
>gi|227891294|ref|ZP_04009099.1| homocysteine methyltransferase [Lactobacillus salivarius ATCC
11741]
gi|227866872|gb|EEJ74293.1| homocysteine methyltransferase [Lactobacillus salivarius ATCC
11741]
Length = 307
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 143/256 (55%), Gaps = 21/256 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ ++ + R + + LW++ L E E H+ + AGAD+I + YQANV
Sbjct: 13 VLDGAMSTPLER--LGADTNNDLWTAKALIDNEELVYEVHKMYFEAGADLIITDTYQANV 70
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK-ENQTPDINLNKTFNLLTGHIETAASIGPY 127
K+GYSE+EA +L+ K+V++ A+D EN+T H A +IGPY
Sbjct: 71 QAFEKVGYSEKEARNLIKKAVKIAQKARDDYENRT------------GKHNYIAGTIGPY 118
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L +GSEY G Y S+ E +H P +E LV AGVD LA+ET P E LA+++LL
Sbjct: 119 GAYLANGSEYRGDYELSVEEYQ--QFHLPRIEELVNAGVDILAIETQPKLDEVLAILELL 176
Query: 188 -REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+++P QK ++S++ DD S G + A+ + L + Q+ A+G+NCV+ V ++
Sbjct: 177 KKKYPQQKVYVSYTLSDDDTISDGTPLPRAIHA--LEDYSQVIAVGINCVKLELVEPALK 234
Query: 247 CIKQSHPTVQTIVYPN 262
+K+ IVYPN
Sbjct: 235 NMKEITDK-HLIVYPN 249
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 148/313 (47%), Gaps = 29/313 (9%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ ++ + R + + LW++ L E E H+ + E A + +
Sbjct: 13 VLDGAMSTPLER--LGADTNNDLWTAKALIDNEELVYEVHKMYF----EAGADL-----I 61
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT------AASI 380
+ D Y ++ + + + L++ V + ++T A +I
Sbjct: 62 ITDT------YQANVQAFEKVGYSEKEARNLIKKAVKIAQKARDDYENRTGKHNYIAGTI 115
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GPYG L +GSEY G Y S+ E +H P +E LV AGVD LA+ET P E LA++
Sbjct: 116 GPYGAYLANGSEYRGDYELSVEEYQ--QFHLPRIEELVNAGVDILAIETQPKLDEVLAIL 173
Query: 441 KLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
+LL++ +P QK ++S++ DD S G + A+ + L + Q+ A+G+NCV+ V
Sbjct: 174 ELLKKKYPQQKVYVSYTLSDDDTISDGTPLPRAIHA--LEDYSQVIAVGINCVKLELVEP 231
Query: 500 LVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
++ +K+ IVYPN V+D W + + +P W E G IIGGCC
Sbjct: 232 ALKNMKEITDK-HLIVYPNSSAVYDPKSKTWSQPKTSATFEELIPNWYEAGARIIGGCCT 290
Query: 560 VTSYEIQQMRIMI 572
EI+ + I
Sbjct: 291 TGPKEIKAVADFI 303
>gi|169625027|ref|XP_001805918.1| hypothetical protein SNOG_15780 [Phaeosphaeria nodorum SN15]
gi|111055755|gb|EAT76875.1| hypothetical protein SNOG_15780 [Phaeosphaeria nodorum SN15]
Length = 319
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 150/264 (56%), Gaps = 17/264 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
L+DG+ + + H D+ G LWS+ L + P+ +TH D+ RAGA+I ++ YQA++
Sbjct: 19 LIDGALATYL-EHLGADISGS-LWSASILLSRPDLIKKTHLDYYRAGANIAITASYQASI 76
Query: 69 DNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTP-DINLNKTFNL--LTGHIETAASI 124
L K LG E EA D++ KSVQL A+D+ Q+ + + ++ + L + A S+
Sbjct: 77 PGLVKHLGLGENEAKDVVKKSVQLAIEARDEYVQSKLEESCERSVDAASLREDLFVAGSV 136
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSEY G Y D EA + +HR V+ALV AGVD LA ETIP+ +E AL+
Sbjct: 137 GPYGAYLSDGSEYRGDY-DVAHEA-MKDFHRGRVQALVDAGVDVLACETIPSRRETEALL 194
Query: 185 KLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
LL+ EF +AW +F+ +D H + G S + L +Q+ +G NCV P ++
Sbjct: 195 DLLQSEFRDAEAWFTFTLRDAEHIADG--TSLVDIAALFETAEQVVGLGFNCV-PDDLA- 250
Query: 244 LVRCIKQSHPTVQ---TIVYPNKG 264
+ +K P V+ +VYPN G
Sbjct: 251 -LAALKNLKPLVKRGTMVVYPNSG 273
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 148/309 (47%), Gaps = 26/309 (8%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETA------ASI 320
L+DG+ + + H D+ G LWS+ L + P+ +TH D+ R A ASI
Sbjct: 19 LIDGALATYL-EHLGADISGS-LWSASILLSRPDLIKKTHLDYYRAGANIAITASYQASI 76
Query: 321 GPYGTVLRDGSEYSGHYVDSMTEADLIA---WHRPNVEALVRAGVDYLALIKPSISSQTA 377
L G + V + + A + + +E VD +L + A
Sbjct: 77 PGLVKHLGLGENEAKDVVKKSVQLAIEARDEYVQSKLEESCERSVDAASLREDLF---VA 133
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
S+GPYG L DGSEY G Y D EA + +HR V+ALV AGVD LA ETIP+ +E
Sbjct: 134 GSVGPYGAYLSDGSEYRGDY-DVAHEA-MKDFHRGRVQALVDAGVDVLACETIPSRRETE 191
Query: 438 ALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
AL+ LL+ EF +AW +F+ +D H + G S + L +Q+ +G NCV P
Sbjct: 192 ALLDLLQSEFRDAEAWFTFTLRDAEHIADG--TSLVDIAALFETAEQVVGLGFNCV-PDD 248
Query: 497 VSTLVRCIKQSHPTVQ---TIVYPNKGGVWDSVHMKWLDTEDE-YSILHYVPQWLEEGVN 552
++ + +K P V+ +VYPN G W++ +W + E + +W G
Sbjct: 249 LA--LAALKNLKPLVKRGTMVVYPNSGEQWNAKAREWEGSRTEGEGLASKTVEWERAGAG 306
Query: 553 IIGGCCEVT 561
+IGGCC T
Sbjct: 307 LIGGCCRTT 315
>gi|184155304|ref|YP_001843644.1| homocysteine methyltransferase [Lactobacillus fermentum IFO 3956]
gi|227514597|ref|ZP_03944646.1| homocysteine S-methyltransferase [Lactobacillus fermentum ATCC
14931]
gi|260662182|ref|ZP_05863078.1| homocysteine S-methyltransferase [Lactobacillus fermentum 28-3-CHN]
gi|385812263|ref|YP_005848654.1| Homocysteine S-methyltransferase [Lactobacillus fermentum CECT
5716]
gi|183226648|dbj|BAG27164.1| homocysteine S-methyltransferase [Lactobacillus fermentum IFO 3956]
gi|227087008|gb|EEI22320.1| homocysteine S-methyltransferase [Lactobacillus fermentum ATCC
14931]
gi|260553565|gb|EEX26457.1| homocysteine S-methyltransferase [Lactobacillus fermentum 28-3-CHN]
gi|299783160|gb|ADJ41158.1| Homocysteine S-methyltransferase [Lactobacillus fermentum CECT
5716]
Length = 310
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 136/258 (52%), Gaps = 21/258 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDGS ++ + K LW+S L P+ + H D+ +AGAD+ + YQ NV
Sbjct: 13 VLDGSMSTPLEVAGAKT--NSDLWTSQTLIDNPDLVYQVHLDYFKAGADLTITDTYQTNV 70
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK-ENQTPDINLNKTFNLLTGHIETAASIGPY 127
D L + G SE+EA +L+ ++VQL N A+D E +T H A SIGPY
Sbjct: 71 DALVRHGLSEEEARNLIKRAVQLANQARDDYEKET------------GKHNYVAGSIGPY 118
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y +T L +H P + A++ GVD LALET P E +A++ LL
Sbjct: 119 GAYLADGSEYRGDY--DLTAIQLQNFHLPRLAAILATGVDCLALETQPKLTEVVAILALL 176
Query: 188 REF-PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+ P ++SFS +D H S G + AV ++ Q+ A+GVNCV V+ ++
Sbjct: 177 KTLEPTMPVYVSFSLRDAEHLSDGTSLKEAVQ--VVTKDPQVFAVGVNCVGLDLVTPAIK 234
Query: 247 CIKQSHPTVQTIVYPNKG 264
IK+ IVYPN G
Sbjct: 235 AIKEVTDK-PVIVYPNSG 251
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 313 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL-IKPS 371
H A SIGPYG L DGSEY G Y +T L +H P + A++ GVD LAL +P
Sbjct: 108 HNYVAGSIGPYGAYLADGSEYRGDY--DLTAIQLQNFHLPRLAAILATGVDCLALETQPK 165
Query: 372 ISSQTA 377
++ A
Sbjct: 166 LTEVVA 171
>gi|418960717|ref|ZP_13512604.1| homocysteine methyltransferase [Lactobacillus salivarius SMXD51]
gi|380344384|gb|EIA32730.1| homocysteine methyltransferase [Lactobacillus salivarius SMXD51]
Length = 307
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 143/256 (55%), Gaps = 21/256 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ ++ + + + + LW++ L E E H+ + AGAD+I + YQANV
Sbjct: 13 VLDGAMSTPLEK--LGADTNNDLWTAKALIDNEELVYEVHKMYFEAGADLIITDTYQANV 70
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK-ENQTPDINLNKTFNLLTGHIETAASIGPY 127
K+GYSE+EA +L+ K+V++ A+D EN+T H A +IGPY
Sbjct: 71 QAFEKVGYSEKEARNLIKKAVKIAQKARDDYENRT------------GKHNYIAGTIGPY 118
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L +GSEY G Y ++ + +H P +E LV AGVD LA+ET P E LA+++LL
Sbjct: 119 GAYLANGSEYRGDY--ELSAEEYQQFHLPRIEELVNAGVDILAIETQPKLDEVLAILELL 176
Query: 188 RE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+E +P QK ++S++ DD S G + A+ + L + Q+ A+G+NCV+ V ++
Sbjct: 177 KEKYPQQKVYVSYTLSDDDTISDGTPLPRAIHA--LEDYSQVIAVGINCVKLELVEPALK 234
Query: 247 CIKQSHPTVQTIVYPN 262
+K+ IVYPN
Sbjct: 235 NMKEITDK-HLIVYPN 249
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 6/197 (3%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A +IGPYG L +GSEY G Y ++ + +H P +E LV AGVD LA+ET P E
Sbjct: 112 AGTIGPYGAYLANGSEYRGDY--ELSAEEYQQFHLPRIEELVNAGVDILAIETQPKLDEV 169
Query: 437 LALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
LA+++LL+E +P QK ++S++ DD S G + A+ + L + Q+ A+G+NCV+
Sbjct: 170 LAILELLKEKYPQQKVYVSYTLSDDDTISDGTPLPRAIHA--LEDYSQVIAVGINCVKLE 227
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
V ++ +K+ IVYPN V+D W + + +P W E G IIG
Sbjct: 228 LVEPALKNMKEITDK-HLIVYPNSSAVYDPKSKTWSQPKTSATFEELIPNWYEAGARIIG 286
Query: 556 GCCEVTSYEIQQMRIMI 572
GCC EI+ + I
Sbjct: 287 GCCTTGPKEIKAVADFI 303
>gi|320546905|ref|ZP_08041207.1| homocysteine S-methyltransferase [Streptococcus equinus ATCC 9812]
gi|320448423|gb|EFW89164.1| homocysteine S-methyltransferase [Streptococcus equinus ATCC 9812]
Length = 314
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 147/267 (55%), Gaps = 21/267 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ DV G LWS+ YL P+ + H ++RAGADII +S YQA +
Sbjct: 15 ILDGALGTELENRGY-DVSGK-LWSAKYLLENPKVIQDLHEVYLRAGADIITTSSYQATI 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGP 126
L G +EQEA D + +V L A++ + D + + L++G +GP
Sbjct: 73 QGLEDYGLTEQEATDTIALTVDLAKKARENVWNVLSDDEKSKRPYPLISG------DVGP 126
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
Y L DGSEY+G+Y +++ + +H ++AL+ AG D+L +ETIP EA AL++L
Sbjct: 127 YAAYLADGSEYNGNY--HLSKEEFKDFHCTRIKALLSAGCDFLGIETIPNVVEAEALIEL 184
Query: 187 LR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
L EFP +A++SF+ +DD S G I + C + QI A G+NC P+ +S L+
Sbjct: 185 LADEFPETEAYMSFTAQDDESISDGTAIETVAALCDASK--QILAFGINCSSPAVISNLL 242
Query: 246 RCIK--QSHPTVQTIVYPNKGVKLLDG 270
+ I+ P V YPN G ++ DG
Sbjct: 243 KKIRTVSQKPLV---TYPNSG-EIYDG 265
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 151/312 (48%), Gaps = 33/312 (10%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIE---------TA 317
+LDG+ +++ DV G LWS+ YL P+ + H ++R + T
Sbjct: 15 ILDGALGTELENRGY-DVSGK-LWSAKYLLENPKVIQDLHEVYLRAGADIITTSSYQATI 72
Query: 318 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA 377
+ YG ++ ++ VD +A W+ V + + P IS
Sbjct: 73 QGLEDYGLTEQEATDTIALTVDLAKKARENVWN-------VLSDDEKSKRPYPLIS---- 121
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
+GPY L DGSEY+G+Y +++ + +H ++AL+ AG D+L +ETIP EA
Sbjct: 122 GDVGPYAAYLADGSEYNGNY--HLSKEEFKDFHCTRIKALLSAGCDFLGIETIPNVVEAE 179
Query: 438 ALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
AL++LL EFP +A++SF+ +DD S G I + C + QI A G+NC P+
Sbjct: 180 ALIELLADEFPETEAYMSFTAQDDESISDGTAIETVAALCDASK--QILAFGINCSSPAV 237
Query: 497 VSTLVRCIK--QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDE-YSILHYVPQWLEEGVNI 553
+S L++ I+ P V YPN G ++D V W D +++L W + G +
Sbjct: 238 ISNLLKKIRTVSQKPLV---TYPNSGEIYDGVTQTWKSLPDHTHTLLENSQIWHQFGAKV 294
Query: 554 IGGCCEVTSYEI 565
+GGCC T +I
Sbjct: 295 VGGCCRTTPDDI 306
>gi|372477767|gb|AEX97078.1| homocysteine s-methytransferase, partial [Malus x domestica]
Length = 324
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 138/269 (51%), Gaps = 23/269 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG F +Q+ RH D PLWS+V L +P+ H D++ AGADI+ +S YQA +
Sbjct: 23 VVDGGFATQLERHGAAIND--PLWSAVCLINQPDLIKRVHLDYLDAGADILITSSYQATI 80
Query: 69 DNLTKLGYSEQEALDLLHKSVQLM----NSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
G S ++ LL KSV+L NS D TPD N+ AASI
Sbjct: 81 PGFLSRGLSIEQGELLLKKSVKLAVEARNSFWDALKVTPDHRYNRAL--------VAASI 132
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
G YG L DGSEYSG Y + L +HR + LV AG D LA ET P + EA A +
Sbjct: 133 GSYGAYLADGSEYSGCYGPRVDVDKLKDFHRRRFQVLVEAGPDLLAFETFPNKLEAQACL 192
Query: 185 KLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCL--LANPDQIQAIGVNCVRPSHV 241
+LL E Q +W+ FS D + GE T CL + ++I A+G+NC P +
Sbjct: 193 ELLEEQSVQIPSWICFSSVDGENAPSGE----GFTECLEVINKSNKIHAVGINCTPPHLI 248
Query: 242 STLVRCIKQSHPTVQTIVYPNKGVKLLDG 270
+L+ C + + IVYPN G ++ DG
Sbjct: 249 KSLI-CKFKDLTSKAIIVYPNSG-EIWDG 275
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 149/315 (47%), Gaps = 24/315 (7%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G ++DG F +Q+ RH D PLWS+V L +P+ H D++ + +
Sbjct: 20 GCAVVDGGFATQLERHGAAIND--PLWSAVCLINQPDLIKRVHLDYLDAGADILITSSYQ 77
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-----TAA 378
T+ G G S+ + +L+ + +V+ V A + +K + + AA
Sbjct: 78 ATI--PGFLSRGL---SIEQGELLL--KKSVKLAVEARNSFWDALKVTPDHRYNRALVAA 130
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
SIG YG L DGSEYSG Y + L +HR + LV AG D LA ET P + EA A
Sbjct: 131 SIGSYGAYLADGSEYSGCYGPRVDVDKLKDFHRRRFQVLVEAGPDLLAFETFPNKLEAQA 190
Query: 439 LVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCL--LANPDQIQAIGVNCVRPS 495
++LL E Q +W+ FS D + GE T CL + ++I A+G+NC P
Sbjct: 191 CLELLEEQSVQIPSWICFSSVDGENAPSGE----GFTECLEVINKSNKIHAVGINCTPPH 246
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE--DEYSILHYVPQWLEEGVNI 553
+ +L+ C + + IVYPN G +WD +WL + DE + + W + G
Sbjct: 247 LIKSLI-CKFKDLTSKAIIVYPNSGEIWDGKAKRWLPAKCFDEENFECFATIWRDSGAKH 305
Query: 554 IGGCCEVTSYEIQQM 568
IG CC T ++ +
Sbjct: 306 IGRCCRTTPSTVRAI 320
>gi|334306355|sp|A4ZGQ8.1|HMT1_BRAOT RecName: Full=Homocysteine S-methyltransferase 1; Short=BoHMT1
gi|110468086|gb|ABG74913.1| homocysteine methyltransferase 1 [Brassica oleracea var. italica]
Length = 326
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/285 (36%), Positives = 146/285 (51%), Gaps = 25/285 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG F +Q+ H D PLWS+V L +PE H +++ AGAD++ +S YQA +
Sbjct: 22 VVDGGFATQLEIHGAAIND--PLWSAVSLIKDPELIKRVHMEYLEAGADVVVTSSYQATI 79
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKD----KENQTPDINLNKTFNLLTGHIETAASI 124
G S +E+ LL KSV+L A+D K ++T + N+ AASI
Sbjct: 80 PGFLSRGLSMEESESLLQKSVKLAVEARDRFWDKVSKTSGHSYNRAL--------VAASI 131
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
G YG L DGSEYSG Y + ++ L +HR ++ LV A D LA ETIP + EA A V
Sbjct: 132 GSYGAYLADGSEYSGSYGEDVSLDKLKDFHRRRIQVLVEASPDLLAFETIPNKLEAQACV 191
Query: 185 KLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCL--LANPDQIQAIGVNCVRPSHV 241
+LL E Q AW+ F+ D + GE + CL L + I A+G+NC P +
Sbjct: 192 ELLEEENVQIPAWICFTSVDGENAPSGE----SFQECLETLNKSNNICAVGINCAPPQFM 247
Query: 242 STLVRCIKQSHPTVQTI-VYPNKGVKLLDGSFTSQVSRHTIKDVD 285
L+R K S T + I VYPN G ++ DG + D +
Sbjct: 248 DNLIR--KFSKLTQKAIVVYPNSG-EVWDGKAKKWLPSQCFGDAE 289
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 156/332 (46%), Gaps = 26/332 (7%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+++ ++ ++ G ++DG F +Q+ H D PLWS+V L +PE H
Sbjct: 3 LEKKSALLEDLIEKCGGCAVVDGGFATQLEIHGAAIND--PLWSAVSLIKDPELIKRVHM 60
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
+++ + + T+ G ++ + + + +V+ V A +
Sbjct: 61 EYLEAGADVVVTSSYQATI-------PGFLSRGLSMEESESLLQKSVKLAVEARDRFWDK 113
Query: 368 IKPSIS-----SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGV 422
+ + + AASIG YG L DGSEYSG Y + ++ L +HR ++ LV A
Sbjct: 114 VSKTSGHSYNRALVAASIGSYGAYLADGSEYSGSYGEDVSLDKLKDFHRRRIQVLVEASP 173
Query: 423 DYLALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCL--LA 479
D LA ETIP + EA A V+LL E Q AW+ F+ D + GE + CL L
Sbjct: 174 DLLAFETIPNKLEAQACVELLEEENVQIPAWICFTSVDGENAPSGE----SFQECLETLN 229
Query: 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTI-VYPNKGGVWDSVHMKWLDTE--DE 536
+ I A+G+NC P + L+R K S T + I VYPN G VWD KWL ++ +
Sbjct: 230 KSNNICAVGINCAPPQFMDNLIR--KFSKLTQKAIVVYPNSGEVWDGKAKKWLPSQCFGD 287
Query: 537 YSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+ +W + G +IGGCC T I+ +
Sbjct: 288 AEFEMFATKWRDLGAKLIGGCCRTTPSTIKAI 319
>gi|297835280|ref|XP_002885522.1| homocysteine S-methyltransferase 3 [Arabidopsis lyrata subsp.
lyrata]
gi|297331362|gb|EFH61781.1| homocysteine S-methyltransferase 3 [Arabidopsis lyrata subsp.
lyrata]
Length = 347
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 171/355 (48%), Gaps = 51/355 (14%)
Query: 248 IKQSHPTVQTIVYPN-KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETH 306
+K+ ++ T N G ++DG F +++ RH D++ PLWS+ L T P + H
Sbjct: 5 VKEETSSLMTDFLENCGGYAVVDGGFATELQRHG-ADIN-DPLWSAKCLITSPHLVTKVH 62
Query: 307 RDF----------------IRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWH 350
D+ I+G + S+ +LR V+ EA I ++
Sbjct: 63 LDYLESGANIIITASYQATIQGFVAKGLSVEEAENLLR-------RSVEITYEAREIFYN 115
Query: 351 RPNVEALVRAGVDYLALIKPSISS-QTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAW 409
R + D+ K S AAS+G YG L DGSEYSG Y DS+++ L +
Sbjct: 116 R-----CTKGSWDFAYAGKASRRPILVAASVGSYGAYLADGSEYSGIYGDSVSKETLKDF 170
Query: 410 HRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSH 465
HR V+ L +G D++A ETIP + EA A LL E P AW SF+ KD
Sbjct: 171 HRRRVQILANSGADFIAFETIPNKLEAEAYADLLEEEDINIP---AWFSFTSKDGVTVPR 227
Query: 466 GELISSAVTSCLLANP-DQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGV 522
G+ S V +A+ ++ AIG+NC P ++ L+ ++Q P V VYPN G +
Sbjct: 228 GD---SVVECAKVADSCKKVVAIGINCTAPRYIHDLIISLRQVTRKPIV---VYPNSGEI 281
Query: 523 WDSVHMKWL--DTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM-RIMIDE 574
+D ++ KW+ + E E + YV +W + G ++ GGCC T I+ + +++ DE
Sbjct: 282 YDGLNKKWIRSEGESEEDFVSYVSKWRDAGASLFGGCCRTTPNTIRAIAKVLSDE 336
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 147/272 (54%), Gaps = 22/272 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG F +++ RH D++ PLWS+ L T P + H D++ +GA+II ++ YQA +
Sbjct: 25 VVDGGFATELQRHG-ADIN-DPLWSAKCLITSPHLVTKVHLDYLESGANIIITASYQATI 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKD-KENQTPDINLNKTFNLLTGH--IETAASIG 125
G S +EA +LL +SV++ A++ N+ + + + I AAS+G
Sbjct: 83 QGFVAKGLSVEEAENLLRRSVEITYEAREIFYNRCTKGSWDFAYAGKASRRPILVAASVG 142
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
YG L DGSEYSG Y DS+++ L +HR V+ L +G D++A ETIP + EA A
Sbjct: 143 SYGAYLADGSEYSGIYGDSVSKETLKDFHRRRVQILANSGADFIAFETIPNKLEAEAYAD 202
Query: 186 LLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIGVNCVRPSH 240
LL E P AW SF+ KD G+ S V +A+ ++ AIG+NC P +
Sbjct: 203 LLEEEDINIP---AWFSFTSKDGVTVPRGD---SVVECAKVADSCKKVVAIGINCTAPRY 256
Query: 241 VSTLVRCIKQ--SHPTVQTIVYPNKGVKLLDG 270
+ L+ ++Q P V VYPN G ++ DG
Sbjct: 257 IHDLIISLRQVTRKPIV---VYPNSG-EIYDG 284
>gi|15609595|ref|NP_216974.1| Probable homocysteine S-methyltransferase MmuM
(S-methylmethionine:homocysteine methyltransferase)
(cysteine methyltransferase) [Mycobacterium tuberculosis
H37Rv]
gi|148662293|ref|YP_001283816.1| homocysteine methyltransferase [Mycobacterium tuberculosis H37Ra]
gi|167969783|ref|ZP_02552060.1| homocysteine methyltransferase [Mycobacterium tuberculosis H37Ra]
gi|306776728|ref|ZP_07415065.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu001]
gi|306972838|ref|ZP_07485499.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu010]
gi|307080544|ref|ZP_07489714.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu011]
gi|307085142|ref|ZP_07494255.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu012]
gi|397674360|ref|YP_006515895.1| homocysteine S-methyltransferase [Mycobacterium tuberculosis H37Rv]
gi|148506445|gb|ABQ74254.1| homocysteine methyltransferase [Mycobacterium tuberculosis H37Ra]
gi|308214888|gb|EFO74287.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu001]
gi|308357766|gb|EFP46617.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu010]
gi|308361711|gb|EFP50562.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu011]
gi|308365321|gb|EFP54172.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu012]
gi|395139265|gb|AFN50424.1| homocysteine S-methyltransferase [Mycobacterium tuberculosis H37Rv]
gi|444895990|emb|CCP45251.1| Probable homocysteine S-methyltransferase MmuM
(S-methylmethionine:homocysteine methyltransferase)
(cysteine methyltransferase) [Mycobacterium tuberculosis
H37Rv]
Length = 302
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 131/261 (50%), Gaps = 27/261 (10%)
Query: 6 KVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
V + DG +++ H + D PLWS+ L P A H + RAGA I ++
Sbjct: 7 SVLISDGGLATELEARGHDLSD----PLWSARLLVDAPHAITAVHTAYFRAGAQIATTAS 62
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
YQA+ + G +A LL +SV+L +A+D+ G + AAS
Sbjct: 63 YQASFEGFAARGIGHDDATVLLRRSVELAQAARDEVG--------------VGGLSVAAS 108
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G+Y ++ A L+ WH P +E LV AG D LALETIP EA AL
Sbjct: 109 VGPYGAALADGSEYRGYY--GLSVAALMKWHLPRLEVLVDAGADMLALETIPDIDEAEAL 166
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
V L+R AWLS++ + T T G+ ++ A + A +I A+GVNC P V
Sbjct: 167 VNLVRRL-ATPAWLSYTI-NGTRTRAGQPLTDAF--AVAAGVPEIVAVGVNCCAPDDVLP 222
Query: 244 LVRCIKQSHPTVQTIVYPNKG 264
+ +H IVYPN G
Sbjct: 223 AI-AFAVAHTGKPVIVYPNSG 242
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 143/307 (46%), Gaps = 26/307 (8%)
Query: 265 VKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
V + DG +++ H + D PLWS+ L P A H + R + A
Sbjct: 8 VLISDGGLATELEARGHDLSD----PLWSARLLVDAPHAITAVHTAYFRAGAQIA----- 58
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
T + + G + D R +VE L +A D + + S+ AAS+GP
Sbjct: 59 --TTASYQASFEGFAARGIGHDDATVLLRRSVE-LAQAARDEVGVGGLSV----AASVGP 111
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY G+Y ++ A L+ WH P +E LV AG D LALETIP EA ALV L
Sbjct: 112 YGAALADGSEYRGYY--GLSVAALMKWHLPRLEVLVDAGADMLALETIPDIDEAEALVNL 169
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
+R AWLS++ + T T G+ ++ A + A +I A+GVNC P V +
Sbjct: 170 VRRL-ATPAWLSYTI-NGTRTRAGQPLTDAF--AVAAGVPEIVAVGVNCCAPDDVLPAI- 224
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVT 561
+H IVYPN G WD W+ S +W+ G I+GGCC V
Sbjct: 225 AFAVAHTGKPVIVYPNSGEGWDGRRRAWVGPRRFSGSSGQLAREWVAAGARIVGGCCRVR 284
Query: 562 SYEIQQM 568
+I ++
Sbjct: 285 PIDIAEI 291
>gi|313894915|ref|ZP_07828475.1| homocysteine S-methyltransferase [Selenomonas sp. oral taxon 137
str. F0430]
gi|312976596|gb|EFR42051.1| homocysteine S-methyltransferase [Selenomonas sp. oral taxon 137
str. F0430]
Length = 332
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 142/282 (50%), Gaps = 32/282 (11%)
Query: 4 ICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+ + +LDG+F +++ D LWS+ + P+ + H D++RAGADI+ S+
Sbjct: 10 VSNILVLDGAFATELEARGFSVNDA--LWSAKAIFERPDLVRDVHLDYLRAGADIVTSAS 67
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKD------------------KENQTPDI 105
YQA V+ K G++E++A L+ +SV+L A+D +E QT
Sbjct: 68 YQATVEGFVKKGFTEEQAAALIVRSVELAREARDIYCLESLADEYHAQEESTREEQTSCS 127
Query: 106 NLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG 165
+ + + G AAS+GPYG L DGSEY G Y + E L A+H + L
Sbjct: 128 SDRREKS--GGAPLVAASVGPYGAYLADGSEYRGDY--GVNEETLSAFHAERLVLLAEGQ 183
Query: 166 VDYLALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSC--LL 222
D LA ET+P EA A+V+ LRE + AW SFSC+D H S G + +T C L
Sbjct: 184 PDLLACETLPCLTEAQAIVRALREKEIRIPAWFSFSCRDGAHISDG----TPITDCARFL 239
Query: 223 ANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+ A+GVNC P +V L+ I++ +VYPN G
Sbjct: 240 DTVPEAAAVGVNCTAPQYVEDLIHAIRRETDK-PVVVYPNSG 280
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 141/330 (42%), Gaps = 48/330 (14%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ +LDG+F +++ D LWS+ + P+ + H D++R + S
Sbjct: 13 ILVLDGAFATELEARGFSVNDA--LWSAKAIFERPDLVRDVHLDYLRAGADIVTSASYQA 70
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD----------YLALIKPSISS 374
TV G TE A +VE L R D Y A + +
Sbjct: 71 TV-------EGFVKKGFTEEQAAALIVRSVE-LAREARDIYCLESLADEYHAQEESTREE 122
Query: 375 QT----------------AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV 418
QT AAS+GPYG L DGSEY G Y + E L A+H + L
Sbjct: 123 QTSCSSDRREKSGGAPLVAASVGPYGAYLADGSEYRGDY--GVNEETLSAFHAERLVLLA 180
Query: 419 RAGVDYLALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSC- 476
D LA ET+P EA A+V+ LRE + AW SFSC+D H S G + +T C
Sbjct: 181 EGQPDLLACETLPCLTEAQAIVRALREKEIRIPAWFSFSCRDGAHISDG----TPITDCA 236
Query: 477 -LLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTED 535
L + A+GVNC P +V L+ I++ +VYPN G + W T +
Sbjct: 237 RFLDTVPEAAAVGVNCTAPQYVEDLIHAIRRETDK-PVVVYPNSGEDYSVSDKSWHGTAE 295
Query: 536 EYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
+++ +W G IIGGCC + +I
Sbjct: 296 DFAA--GARRWRTAGARIIGGCCRTSPRDI 323
>gi|189194487|ref|XP_001933582.1| homocysteine S-methyltransferase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979146|gb|EDU45772.1| homocysteine S-methyltransferase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 319
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 145/261 (55%), Gaps = 21/261 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ + + D+ G LWS+ L +P +TH D+ RA A++ ++ YQA++
Sbjct: 21 ILDGALATYLETLG-ADISG-ALWSASILLDQPSLIKQTHLDYYRANANVAITASYQASI 78
Query: 69 DNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPY 127
L K L +E+EA D++ KSV+L A+D+ + ++ + + A S+GPY
Sbjct: 79 PGLVKHLQLNEKEAKDVVKKSVELAQEARDQ-------YITESTAKVGNQLFIAGSVGPY 131
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y S+ + ++ +HR ++ALV AGVD LA ETIP++ E A++ LL
Sbjct: 132 GAFLADGSEYRGDY--SIPKEEMKDFHRGRIQALVEAGVDILACETIPSKAETEAIIDLL 189
Query: 188 -REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
EF +AW F+ +D H S G S A + L N Q+ A+G NCV P +S V
Sbjct: 190 TTEFASTEAWFGFTLRDSEHISDG--TSLAEIAALFDNVQQVVALGFNCV-PDDLS--VA 244
Query: 247 CIKQSHPTVQT---IVYPNKG 264
+K P V+ +VYPN G
Sbjct: 245 ALKTLKPLVKRGTLVVYPNSG 265
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 152/310 (49%), Gaps = 22/310 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ + + D+ G LWS+ L +P +TH D+ R + A + ++
Sbjct: 21 ILDGALATYLETLG-ADISG-ALWSASILLDQPSLIKQTHLDYYRANANVAITASYQASI 78
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--TAASIGPYG 384
H + EA + + +VE A Y+ + +Q A S+GPYG
Sbjct: 79 ----PGLVKHLQLNEKEAKDVV--KKSVELAQEARDQYITESTAKVGNQLFIAGSVGPYG 132
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL- 443
L DGSEY G Y S+ + ++ +HR ++ALV AGVD LA ETIP++ E A++ LL
Sbjct: 133 AFLADGSEYRGDY--SIPKEEMKDFHRGRIQALVEAGVDILACETIPSKAETEAIIDLLT 190
Query: 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
EF +AW F+ +D H S G S A + L N Q+ A+G NCV P +S V
Sbjct: 191 TEFASTEAWFGFTLRDSEHISDG--TSLAEIAALFDNVQQVVALGFNCV-PDDLS--VAA 245
Query: 504 IKQSHPTVQT---IVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQWLEEGVNIIGGCCE 559
+K P V+ +VYPN G W++ +W E S L +W + G +IGGCC
Sbjct: 246 LKTLKPLVKRGTLVVYPNSGEQWNAQAREWEGKRTEGSSLAEKTREWRDAGAGLIGGCCR 305
Query: 560 VTSYEIQQMR 569
T +I M+
Sbjct: 306 TTPKDIGVMK 315
>gi|356526645|ref|XP_003531927.1| PREDICTED: homocysteine S-methyltransferase 1-like [Glycine max]
Length = 323
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 133/255 (52%), Gaps = 10/255 (3%)
Query: 11 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDN 70
DG F +Q+ +H D PLWS++YL +P + H +++ AGADI+ +S YQA +
Sbjct: 20 DGGFATQLEKHGASIND--PLWSAIYLIKDPHLIKQVHLEYLEAGADILVTSSYQATLPG 77
Query: 71 LTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
+ G S +E LL KSV+L A+D + IN + AASIG YG+
Sbjct: 78 FSSKGLSIEEGESLLEKSVKLAVEARDGFWNSAIINPGNKYR----RALVAASIGSYGSY 133
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 190
L DGSEYSG Y + L +HR ++ LV AG D LA ETIP + EA A V+LL E
Sbjct: 134 LADGSEYSGCYGPDVNLKKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLEEE 193
Query: 191 PGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 249
+ +W+ F+ D + GE + + L +++ A+G+NC P + L+ K
Sbjct: 194 SVKIPSWICFTTVDGENAPSGESFKDCLEA--LNKSNKVDAVGINCAPPHLMENLICKFK 251
Query: 250 QSHPTVQTIVYPNKG 264
Q IVYPN G
Sbjct: 252 QLTKKA-IIVYPNSG 265
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 145/317 (45%), Gaps = 32/317 (10%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIE-------- 315
G + DG F +Q+ +H D PLWS++YL +P + H +++ +
Sbjct: 15 GCAVTDGGFATQLEKHGASIND--PLWSAIYLIKDPHLIKQVHLEYLEAGADILVTSSYQ 72
Query: 316 -TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISS 374
T G + +G V EA W+ A++ G Y +
Sbjct: 73 ATLPGFSSKGLSIEEGESLLEKSVKLAVEARDGFWN----SAIINPGNKYRRAL------ 122
Query: 375 QTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 434
AASIG YG+ L DGSEYSG Y + L +HR ++ LV AG D LA ETIP +
Sbjct: 123 -VAASIGSYGSYLADGSEYSGCYGPDVNLKKLKDFHRRRLQVLVEAGPDLLAFETIPNKL 181
Query: 435 EALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
EA A V+LL E + +W+ F+ D + GE + + L +++ A+G+NC
Sbjct: 182 EAQACVELLEEESVKIPSWICFTTVDGENAPSGESFKDCLEA--LNKSNKVDAVGINCAP 239
Query: 494 PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDT----EDEYSILHYVPQWLEE 549
P + L+ KQ IVYPN G VWD KWL + +DE+ +W +
Sbjct: 240 PHLMENLICKFKQLTKKA-IIVYPNSGEVWDGKAKKWLPSKCFHDDEFGF--NATRWRDL 296
Query: 550 GVNIIGGCCEVTSYEIQ 566
G IIGGCC T IQ
Sbjct: 297 GAKIIGGCCRTTPSTIQ 313
>gi|449434616|ref|XP_004135092.1| PREDICTED: homocysteine S-methyltransferase 1-like [Cucumis
sativus]
gi|449493450|ref|XP_004159294.1| PREDICTED: homocysteine S-methyltransferase 1-like [Cucumis
sativus]
Length = 328
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 141/282 (50%), Gaps = 23/282 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG F +Q+ +H V PLWS+V L +P + H +++ AGADI+ SS YQA +
Sbjct: 22 VIDGGFATQLEKHGA--VINDPLWSAVCLINDPHLIKKVHLEYLEAGADILVSSSYQATI 79
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH----IETAASI 124
G S +E LL KSV+L A+D + + + GH AASI
Sbjct: 80 PGFISKGLSVEEGELLLEKSVKLAIEARD--------SFWDSVKCIPGHKYNRALVAASI 131
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
G YG L DGSEYSGHY + L +HR ++ V A D LA ETIP + EA A V
Sbjct: 132 GSYGAYLADGSEYSGHYGPDVNVDKLKDFHRRRLQIFVDASPDLLAFETIPNKLEAQACV 191
Query: 185 KLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLA--NPDQIQAIGVNCVRPSHV 241
+LL E Q +W+ FS D + GE + CL A D++ A+G+NC P +
Sbjct: 192 ELLEEENIQIPSWICFSSVDGENAPSGE----SFEKCLYAINKSDKVNAVGINCTPPHFI 247
Query: 242 STLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKD 283
L+ K+ +VYPN G ++ DG F + + D
Sbjct: 248 EALITKFKE-LTNKHIVVYPNSG-EVWDGRFKKWLPSNCFGD 287
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 158/339 (46%), Gaps = 28/339 (8%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
IK++ + ++ G ++DG F +Q+ +H V PLWS+V L +P + H
Sbjct: 3 IKKATTLLDDFLHNAGGCAVIDGGFATQLEKHGA--VINDPLWSAVCLINDPHLIKKVHL 60
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
+++ + S T+ G G S+ E +L+ +V+ + A +
Sbjct: 61 EYLEAGADILVSSSYQATI--PGFISKGL---SVEEGELLL--EKSVKLAIEARDSFWDS 113
Query: 368 IK-----PSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGV 422
+K + AASIG YG L DGSEYSGHY + L +HR ++ V A
Sbjct: 114 VKCIPGHKYNRALVAASIGSYGAYLADGSEYSGHYGPDVNVDKLKDFHRRRLQIFVDASP 173
Query: 423 DYLALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLA-- 479
D LA ETIP + EA A V+LL E Q +W+ FS D + GE + CL A
Sbjct: 174 DLLAFETIPNKLEAQACVELLEEENIQIPSWICFSSVDGENAPSGE----SFEKCLYAIN 229
Query: 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDT----ED 535
D++ A+G+NC P + L+ K+ +VYPN G VWD KWL + +D
Sbjct: 230 KSDKVNAVGINCTPPHFIEALITKFKE-LTNKHIVVYPNSGEVWDGRFKKWLPSNCFGDD 288
Query: 536 EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDE 574
++ L +W G IGGCC T I+ + ++ E
Sbjct: 289 KFESLS--SRWRNLGATFIGGCCRTTPSTIRAVSKVLKE 325
>gi|289662875|ref|ZP_06484456.1| homocysteine methyltransferase [Xanthomonas campestris pv.
vasculorum NCPPB 702]
Length = 321
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 163/333 (48%), Gaps = 30/333 (9%)
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE 300
++ L R + + P Q + + G +LDG+ +++ + D LWS+ L +P+
Sbjct: 1 MTILPRHPRANAPFSQALQH--DGYVVLDGALATELEQRGCDLND--TLWSARVLMEQPQ 56
Query: 301 ACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 360
+ HRD+ + A + T L ++ +D LIA +VE V+A
Sbjct: 57 LIYQVHRDYFAAGAQCAITASYQATPL----GFAARGLDVAQSQALIA---RSVELAVQA 109
Query: 361 GVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 420
D+L + S+GPYG L DGSEY G YV + + L+ +HRP + AL A
Sbjct: 110 RADHLHAQPQAAPLWVVGSVGPYGAYLADGSEYRGDYVLPVEQ--LMDFHRPRIAALAEA 167
Query: 421 GVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 479
GVD LA ET+PA E +AL +LL+ EFP AW SF+ +D H S G ++ V + L
Sbjct: 168 GVDLLACETLPAAGEIVALRRLLQHEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LD 225
Query: 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-------LD 532
Q+ AIG+NC+ V+ + + + + +VYPN G +D+ +W L
Sbjct: 226 ACTQVIAIGINCIALDQVTDALHSLS-ALTALPLVVYPNSGEHYDASDKRWHAGHGTALT 284
Query: 533 TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
D+++ QWL G ++GGCC T +I
Sbjct: 285 LADQHA------QWLAAGARLVGGCCRTTPRDI 311
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 131/258 (50%), Gaps = 19/258 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + D LWS+ L +P+ + HRD+ AGA ++ YQA
Sbjct: 25 VLDGALATELEQRGCDLND--TLWSARVLMEQPQLIYQVHRDYFAAGAQCAITASYQATP 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASIGPY 127
G ++ L+ +SV+L A+ D + P + S+GPY
Sbjct: 83 LGFAARGLDVAQSQALIARSVELAVQARADHLHAQPQ----------AAPLWVVGSVGPY 132
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G YV + + L+ +HRP + AL AGVD LA ET+PA E +AL +LL
Sbjct: 133 GAYLADGSEYRGDYVLPVEQ--LMDFHRPRIAALAEAGVDLLACETLPAAGEIVALRRLL 190
Query: 188 R-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+ EFP AW SF+ +D H S G ++ V + L Q+ AIG+NC+ V+ +
Sbjct: 191 QHEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LDACTQVIAIGINCIALDQVTDALH 248
Query: 247 CIKQSHPTVQTIVYPNKG 264
+ + + +VYPN G
Sbjct: 249 SLS-ALTALPLVVYPNSG 265
>gi|422858544|ref|ZP_16905194.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1057]
gi|327460430|gb|EGF06767.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1057]
Length = 315
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 144/264 (54%), Gaps = 20/264 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ +LDG+ +++ DV G LWS+ YL +P+ H ++RAG+DII +S YQ
Sbjct: 12 EIIILDGALGTELESRGY-DVSGK-LWSAQYLLDQPQIIQNVHESYVRAGSDIITTSSYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAAS 123
A++ + G + ++A DLL ++V L A + +P+ + + L+ G S
Sbjct: 70 ASIPAFVEAGLTPEKAYDLLKETVFLAQKAIENVWTGLSPEEQKQRPYPLVAG------S 123
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPY L DGSEY+G Y ++E + +HRP ++AL+ AG D LA+ETIP EA A+
Sbjct: 124 VGPYAAYLADGSEYTGDY--QLSEEEFQEFHRPRIQALLEAGCDLLAIETIPNGAEAAAI 181
Query: 184 VKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++LL EFP +A+LSF + +T S G I L Q+ A+G NC P ++
Sbjct: 182 LRLLAEEFPQAEAYLSFVAQSETAISDGTKIED--LGNLAQESPQVLAVGFNCTAPHLIT 239
Query: 243 TLVRCIKQ--SHPTVQTIVYPNKG 264
L+ + Q + P + YPN G
Sbjct: 240 PLLDGLGQVCNKP---FLTYPNSG 260
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 149/318 (46%), Gaps = 35/318 (11%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ +LDG+ +++ DV G LWS+ YL +P+ H ++R G
Sbjct: 13 IIILDGALGTELESRGY-DVSGK-LWSAQYLLDQPQIIQNVHESYVRA-----------G 59
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWH-----RPNVEALVRAGVDYLALIKPSISSQ---- 375
+ + S Y + + EA L + V +A + + P Q
Sbjct: 60 SDIITTSSYQAS-IPAFVEAGLTPEKAYDLLKETVFLAQKAIENVWTGLSPEEQKQRPYP 118
Query: 376 -TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 434
A S+GPY L DGSEY+G Y ++E + +HRP ++AL+ AG D LA+ETIP
Sbjct: 119 LVAGSVGPYAAYLADGSEYTGDY--QLSEEEFQEFHRPRIQALLEAGCDLLAIETIPNGA 176
Query: 435 EALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
EA A+++LL EFP +A+LSF + +T S G I L Q+ A+G NC
Sbjct: 177 EAAAILRLLAEEFPQAEAYLSFVAQSETAISDGTKIED--LGNLAQESPQVLAVGFNCTA 234
Query: 494 PSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEG 550
P ++ L+ + Q + P + YPN G ++ + W D E E S+L W +G
Sbjct: 235 PHLITPLLDGLGQVCNKP---FLTYPNSGETYNGLTKTWHDDPEQERSLLENSKLWQNQG 291
Query: 551 VNIIGGCCEVTSYEIQQM 568
V + GGCC +I Q+
Sbjct: 292 VRLFGGCCRTRPEDIDQL 309
>gi|42572531|ref|NP_974361.1| homocysteine S-methyltransferase 1 [Arabidopsis thaliana]
gi|332643565|gb|AEE77086.1| homocysteine S-methyltransferase 1 [Arabidopsis thaliana]
Length = 268
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 128/241 (53%), Gaps = 13/241 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG F +Q+ H D PLWS+V L PE H +++ AGADI+ +S YQA +
Sbjct: 22 VVDGGFATQLEIHGAAIND--PLWSAVSLIKNPELIKRVHMEYLEAGADIVVTSSYQATI 79
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G S +E+ LL KSV+L A+D+ + ++N AASIG YG
Sbjct: 80 PGFLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVSGHSYN----RALVAASIGSYG 135
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEYSGHY ++++ L +HR ++ LV AG D LA ETIP + EA A V+LL
Sbjct: 136 AYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLE 195
Query: 189 EFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCL--LANPDQIQAIGVNCVRPSHVSTLV 245
E Q AW+ F+ D GE + CL L + I A+G+NC P + L+
Sbjct: 196 EEKVQIPAWICFTSVDGEKAPSGE----SFEECLEPLNKSNNIYAVGINCAPPQFIENLI 251
Query: 246 R 246
R
Sbjct: 252 R 252
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 23/264 (8%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+++ ++ ++ G ++DG F +Q+ H D PLWS+V L PE H
Sbjct: 3 LEKKSALLEDLIKKCGGCAVVDGGFATQLEIHGAAIND--PLWSAVSLIKNPELIKRVHM 60
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
+++ + + T+ G ++ + + + +VE V A +
Sbjct: 61 EYLEAGADIVVTSSYQATI-------PGFLSRGLSIEESESLLQKSVELAVEARDRFWEK 113
Query: 368 IKPSISSQT------AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG 421
+ +S + AASIG YG L DGSEYSGHY ++++ L +HR ++ LV AG
Sbjct: 114 VS-KVSGHSYNRALVAASIGSYGAYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAG 172
Query: 422 VDYLALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCL--L 478
D LA ETIP + EA A V+LL E Q AW+ F+ D GE + CL L
Sbjct: 173 PDLLAFETIPNKLEAQACVELLEEEKVQIPAWICFTSVDGEKAPSGE----SFEECLEPL 228
Query: 479 ANPDQIQAIGVNCVRPSHVSTLVR 502
+ I A+G+NC P + L+R
Sbjct: 229 NKSNNIYAVGINCAPPQFIENLIR 252
>gi|304398684|ref|ZP_07380556.1| homocysteine S-methyltransferase [Pantoea sp. aB]
gi|440758196|ref|ZP_20937368.1| Homocysteine S-methyltransferase [Pantoea agglomerans 299R]
gi|304353895|gb|EFM18270.1| homocysteine S-methyltransferase [Pantoea sp. aB]
gi|436428075|gb|ELP25740.1| Homocysteine S-methyltransferase [Pantoea agglomerans 299R]
Length = 311
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 155/305 (50%), Gaps = 26/305 (8%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFI----RGHIETAASIGP 322
+LDG+ +++ D LWS+ L PE + H D+ R I + P
Sbjct: 17 ILDGALATELEARGCHLADA--LWSAKVLMENPELIYQVHYDYFVAGARCAITASYQATP 74
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
G R + EA +A +VE RA DYLA+ + + A S+GP
Sbjct: 75 QGFATR-----------GLDEAQSLALIAQSVELARRARQDYLAVRPDAKTLLVAGSVGP 123
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY G Y ++ EA+++A+HRP V+AL+ AG D LA ET+P+ EA ALVKL
Sbjct: 124 YGAFLADGSEYRGDY--ALPEAEMMAFHRPRVQALLAAGADLLACETLPSFAEAQALVKL 181
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
L EFP +AW +F+ +D H S G +S V+ L Q+ A+G+NCV V+ ++
Sbjct: 182 LAEFPEGRAWFTFTLRDAGHISDGTPLSEVVS--WLNQQPQVIALGINCVALESVTPALQ 239
Query: 503 CIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEV 560
+++ P V VYPN G +D+ W ++ + +W + G +IGGCC
Sbjct: 240 QLQRLTDKPLV---VYPNSGEQYDASSKTWHSAPSGCTLHDKLDEWQQAGAKLIGGCCRT 296
Query: 561 TSYEI 565
+ +I
Sbjct: 297 SPNDI 301
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 139/259 (53%), Gaps = 22/259 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE + H D+ AGA ++ YQA
Sbjct: 17 ILDGALATELEARGCHLADA--LWSAKVLMENPELIYQVHYDYFVAGARCAITASYQATP 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASIGPY 127
G E ++L L+ +SV+L A+ D PD LL A S+GPY
Sbjct: 75 QGFATRGLDEAQSLALIAQSVELARRARQDYLAVRPDAK-----TLLV-----AGSVGPY 124
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y ++ EA+++A+HRP V+AL+ AG D LA ET+P+ EA ALVKLL
Sbjct: 125 GAFLADGSEYRGDY--ALPEAEMMAFHRPRVQALLAAGADLLACETLPSFAEAQALVKLL 182
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP +AW +F+ +D H S G +S V+ L Q+ A+G+NCV V+ ++
Sbjct: 183 AEFPEGRAWFTFTLRDAGHISDGTPLSEVVS--WLNQQPQVIALGINCVALESVTPALQQ 240
Query: 248 IKQ--SHPTVQTIVYPNKG 264
+++ P V VYPN G
Sbjct: 241 LQRLTDKPLV---VYPNSG 256
>gi|384427269|ref|YP_005636627.1| homocysteine S-methyltransferase [Xanthomonas campestris pv.
raphani 756C]
gi|341936370|gb|AEL06509.1| homocysteine S-methyltransferase [Xanthomonas campestris pv.
raphani 756C]
Length = 320
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 149/311 (47%), Gaps = 15/311 (4%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
V G +LDG+ +++ + D LWS+ L +PE + HRD+ + A
Sbjct: 17 VLQRDGEVVLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAI 74
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAA 378
+ T G + A A +V +A D+LA + A
Sbjct: 75 TASYQATP-------QGFAARGLGLAQSQALIARSVALAAQARADHLAAHPQAAPLWVAG 127
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG L DGSEY G Y ++ A ++ +HRP + ALV AGVD LA ET+P+ E A
Sbjct: 128 SVGPYGAYLADGSEYRGDY--ALPVAQMLDFHRPRIAALVDAGVDLLACETLPSASEITA 185
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
L LL EFP AW SF+ +D H S G ++ V L A P Q+ A+G+NC+ V+
Sbjct: 186 LRLLLEEFPQVHAWFSFTLRDAAHLSDGTPLAQ-VIPALDACP-QVVAVGINCIAIEQVT 243
Query: 499 TLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQWLEEGVNIIGGC 557
++ + + ++ +VYPN G +D+ +W T S+ QW G +IGGC
Sbjct: 244 AALQSLA-ALTSLPLVVYPNSGEHYDASDKRWHAGTTAACSLATQRAQWHAAGARLIGGC 302
Query: 558 CEVTSYEIQQM 568
C T +I +
Sbjct: 303 CRTTPADIAAL 313
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 131/257 (50%), Gaps = 18/257 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + D LWS+ L +PE + HRD+ AGA ++ YQA
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASIGPY 127
G ++ L+ +SV L A+ D P + A S+GPY
Sbjct: 83 QGFAARGLGLAQSQALIARSVALAAQARADHLAAHPQ----------AAPLWVAGSVGPY 132
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y ++ A ++ +HRP + ALV AGVD LA ET+P+ E AL LL
Sbjct: 133 GAYLADGSEYRGDY--ALPVAQMLDFHRPRIAALVDAGVDLLACETLPSASEITALRLLL 190
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP AW SF+ +D H S G ++ V L A P Q+ A+G+NC+ V+ ++
Sbjct: 191 EEFPQVHAWFSFTLRDAAHLSDGTPLAQ-VIPALDACP-QVVAVGINCIAIEQVTAALQS 248
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + ++ +VYPN G
Sbjct: 249 LA-ALTSLPLVVYPNSG 264
>gi|325916613|ref|ZP_08178876.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Xanthomonas vesicatoria
ATCC 35937]
gi|325537167|gb|EGD08900.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Xanthomonas vesicatoria
ATCC 35937]
Length = 320
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 151/305 (49%), Gaps = 15/305 (4%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
++G LLDG+ +++ + D LWS+ L +PE + HRD+ + A +
Sbjct: 20 HEGYVLLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITAS 77
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
T L ++ +D LIA +V +A D+L + A S+G
Sbjct: 78 YQATPL----GFAARGLDLAQSQALIA---RSVALAAQARDDHLQAQPDAAPLWVAGSVG 130
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG L DGSEY G Y ++ A L+ +HRP + AL AGVD LA ET+P+ E +AL
Sbjct: 131 PYGAYLADGSEYRGDY--ALPLAQLMEFHRPRIAALAAAGVDVLACETLPSANEIVALRL 188
Query: 442 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
LL EFP AW SF+ +D H S G ++ + + L Q+ A+G+NC+ V+ +
Sbjct: 189 LLEEFPHLHAWFSFTLRDADHLSDGTPLAHVIPA--LDACAQVIAVGINCIALDQVTAAL 246
Query: 502 RCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQWLEEGVNIIGGCCEV 560
+ + + T+ +VYPN G +D+ +W S+ +WL G +IGGCC
Sbjct: 247 QSLS-ALTTLPLVVYPNSGEHYDAGDKRWHGGNAPGCSLADQHTRWLAAGARLIGGCCRT 305
Query: 561 TSYEI 565
T +I
Sbjct: 306 TPRDI 310
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 132/257 (51%), Gaps = 18/257 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ + D LWS+ L +PE + HRD+ AGA ++ YQA
Sbjct: 25 LLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQT-PDINLNKTFNLLTGHIETAASIGPY 127
G ++ L+ +SV L A+D Q PD + A S+GPY
Sbjct: 83 LGFAARGLDLAQSQALIARSVALAAQARDDHLQAQPD----------AAPLWVAGSVGPY 132
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y ++ A L+ +HRP + AL AGVD LA ET+P+ E +AL LL
Sbjct: 133 GAYLADGSEYRGDY--ALPLAQLMEFHRPRIAALAAAGVDVLACETLPSANEIVALRLLL 190
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP AW SF+ +D H S G ++ + + L Q+ A+G+NC+ V+ ++
Sbjct: 191 EEFPHLHAWFSFTLRDADHLSDGTPLAHVIPA--LDACAQVIAVGINCIALDQVTAALQS 248
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + T+ +VYPN G
Sbjct: 249 LS-ALTTLPLVVYPNSG 264
>gi|433635541|ref|YP_007269168.1| Homocysteine S-methyltransferase MmuM
(S-methylmethionine:homocysteine methyltransferase)
(cysteine methyltransferase) [Mycobacterium canettii
CIPT 140070017]
gi|432167134|emb|CCK64644.1| Homocysteine S-methyltransferase MmuM
(S-methylmethionine:homocysteine methyltransferase)
(cysteine methyltransferase) [Mycobacterium canettii
CIPT 140070017]
Length = 302
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 130/261 (49%), Gaps = 27/261 (10%)
Query: 6 KVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
V + DG +++ H + D PLWS+ L P A H + RAGA I ++
Sbjct: 7 SVLISDGGLATELEARGHDLSD----PLWSARLLVDAPHAITAVHTAYFRAGAQIATTAS 62
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
YQA+ + G +A LL +SV+L +A+D+ G + AAS
Sbjct: 63 YQASFEGFAARGIGHDDATVLLRRSVELARAARDEVG--------------VGGLSVAAS 108
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G Y ++ A L+ WH P +E LV AG D LALETIP EA AL
Sbjct: 109 VGPYGAALADGSEYRGRY--GLSVAALMRWHLPRLEVLVDAGADVLALETIPDIDEAEAL 166
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
V L+R AWLS++ + T T G+ ++ A + A +I A+GVNC P V
Sbjct: 167 VNLVRRL-ATPAWLSYTI-NGTRTRAGQPLTDAF--AVAAGVPEIVAVGVNCCAPDDVLP 222
Query: 244 LVRCIKQSHPTVQTIVYPNKG 264
+ +H IVYPN G
Sbjct: 223 AI-AFAVAHTGKPVIVYPNSG 242
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 142/307 (46%), Gaps = 26/307 (8%)
Query: 265 VKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
V + DG +++ H + D PLWS+ L P A H + R + A
Sbjct: 8 VLISDGGLATELEARGHDLSD----PLWSARLLVDAPHAITAVHTAYFRAGAQIA----- 58
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
T + + G + D R +VE L RA D + + S+ AAS+GP
Sbjct: 59 --TTASYQASFEGFAARGIGHDDATVLLRRSVE-LARAARDEVGVGGLSV----AASVGP 111
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY G Y ++ A L+ WH P +E LV AG D LALETIP EA ALV L
Sbjct: 112 YGAALADGSEYRGRY--GLSVAALMRWHLPRLEVLVDAGADVLALETIPDIDEAEALVNL 169
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
+R AWLS++ + T T G+ ++ A + A +I A+GVNC P V +
Sbjct: 170 VRRL-ATPAWLSYTI-NGTRTRAGQPLTDAF--AVAAGVPEIVAVGVNCCAPDDVLPAI- 224
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVT 561
+H IVYPN G WD W+ S +W+ G I+GGCC V
Sbjct: 225 AFAVAHTGKPVIVYPNSGEGWDGRRRAWVGPRRFSGSSGQLAREWVAAGARIVGGCCRVR 284
Query: 562 SYEIQQM 568
+I ++
Sbjct: 285 PVDIAEI 291
>gi|303229190|ref|ZP_07315991.1| putative Homocysteine S-methyltransferase [Veillonella atypica
ACS-134-V-Col7a]
gi|302516203|gb|EFL58144.1| putative Homocysteine S-methyltransferase [Veillonella atypica
ACS-134-V-Col7a]
Length = 339
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 137/276 (49%), Gaps = 27/276 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+F +++ RH D LWSS L PE + H ++ AGADII+SS YQA V
Sbjct: 18 VLDGAFGTELERHGCNIHD--ELWSSKMLIENPEIIKKVHISYLAAGADIIESSGYQATV 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKD-----KEN------------QTPDINLNKTF 111
GY +EALDL+ SV+L A++ K N Q PD ++
Sbjct: 76 AGFKAHGYGTEEALDLVKLSVRLAVQARNEFLEAKANDALTLRGITLGEQLPDGSVRYFS 135
Query: 112 NLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 171
AAS+GPYG L DGSEY G Y + L +H P + D LA
Sbjct: 136 EGALPKPLVAASVGPYGAFLADGSEYRGDY--GVQTEYLEVFHIPRIALFCEENPDVLAC 193
Query: 172 ETIPAEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 228
ET+P EA+A+ + L + G AW+SFSCKD+ H S+GE I ++ Q+
Sbjct: 194 ETVPCYDEAIAIARTLCDPLTTKGIPAWISFSCKDEHHISNGETIIKCAE--MIDKVRQV 251
Query: 229 QAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
IG+NC P +V +L++ I+ S VYPN G
Sbjct: 252 TGIGINCTAPEYVESLIKDIR-SVTNKPIAVYPNLG 286
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 149/340 (43%), Gaps = 39/340 (11%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
+ G +LDG+F +++ RH D LWSS L PE + H ++ +
Sbjct: 10 IVKENGPLVLDGAFGTELERHGCNIHD--ELWSSKMLIENPEIIKKVHISYLAAGADIIE 67
Query: 319 SIGPYGTV--------------------LRDGSEYSGHYVDSMTEADLIAWHRPNVEALV 358
S G TV +R + ++++ L E L
Sbjct: 68 SSGYQATVAGFKAHGYGTEEALDLVKLSVRLAVQARNEFLEAKANDALTLRGITLGEQLP 127
Query: 359 RAGVDYL---ALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVE 415
V Y AL KP + AAS+GPYG L DGSEY G Y + L +H P +
Sbjct: 128 DGSVRYFSEGALPKPLV----AASVGPYGAFLADGSEYRGDY--GVQTEYLEVFHIPRIA 181
Query: 416 ALVRAGVDYLALETIPAEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSA 472
D LA ET+P EA+A+ + L + G AW+SFSCKD+ H S+GE I
Sbjct: 182 LFCEENPDVLACETVPCYDEAIAIARTLCDPLTTKGIPAWISFSCKDEHHISNGETIIKC 241
Query: 473 VTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLD 532
++ Q+ IG+NC P +V +L++ I+ S VYPN G +D W
Sbjct: 242 AE--MIDKVRQVTGIGINCTAPEYVESLIKDIR-SVTNKPIAVYPNLGETYDGETKTW-- 296
Query: 533 TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMI 572
+ + S + YV W + G NIIGGCC IQ++ I
Sbjct: 297 SGGQQSFIDYVDVWRKAGANIIGGCCRTNPDIIQEVAKQI 336
>gi|359395784|ref|ZP_09188836.1| Homocysteine S-methyltransferase ybgG [Halomonas boliviensis LC1]
gi|357970049|gb|EHJ92496.1| Homocysteine S-methyltransferase ybgG [Halomonas boliviensis LC1]
Length = 319
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 146/280 (52%), Gaps = 17/280 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG+ +++ D LWS+ L PE + H+ + AGAD ++ YQA V
Sbjct: 18 VIDGALATELEALGCDLNDA--LWSARLLAQAPEKIRQVHQAYFEAGADCAITASYQATV 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G + +EA L+ SV L A+D Q + K AAS+GPYG
Sbjct: 76 PGFMQAGLTAEEARALIQLSVTLAQQARDAVWQPGQTDRPKPL--------IAASVGPYG 127
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y + A L+A+HR E L+ AG D LA ET+P+ +EALA+ LL
Sbjct: 128 AYLADGSEYRGGY--DLDRAGLVAFHRERFELLLAAGADLLAAETLPSLEEALAITDLLA 185
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E PG +AW++FS KD H S G I+ + LAN + AIGVNC +H+ +L++ I
Sbjct: 186 EHPGAQAWITFSAKDGQHISDGTPIAKCAAA--LANCPGVAAIGVNCTALAHIESLIKEI 243
Query: 249 KQSHPTVQTIVYPNKG--VKLLDGSFTSQVSRHTIKDVDG 286
++ + +VYPN G + ++ S HT D+ G
Sbjct: 244 RREC-DLPIVVYPNSGEVYDPVTKTWHSATCDHTAADLSG 282
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 153/312 (49%), Gaps = 27/312 (8%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
++DG+ +++ D LWS+ L PE + H+ + + A + TV
Sbjct: 18 VIDGALATELEALGCDLNDA--LWSARLLAQAPEKIRQVHQAYFEAGADCAITASYQATV 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ----TAASIGP 382
G +T + A + +V L + D A+ +P + + AAS+GP
Sbjct: 76 -------PGFMQAGLTAEEARALIQLSV-TLAQQARD--AVWQPGQTDRPKPLIAASVGP 125
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY G Y + A L+A+HR E L+ AG D LA ET+P+ +EALA+ L
Sbjct: 126 YGAYLADGSEYRGGY--DLDRAGLVAFHRERFELLLAAGADLLAAETLPSLEEALAITDL 183
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
L E PG +AW++FS KD H S G I+ + LAN + AIGVNC +H+ +L++
Sbjct: 184 LAEHPGAQAWITFSAKDGQHISDGTPIAKCAAA--LANCPGVAAIGVNCTALAHIESLIK 241
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLD------TEDEYSILHYVPQWLEEGVNIIGG 556
I++ + +VYPN G V+D V W D + V WL G + GG
Sbjct: 242 EIRREC-DLPIVVYPNSGEVYDPVTKTWHSATCDHTAADLSGLAQGVEHWLAAGASGFGG 300
Query: 557 CCEVTSYEIQQM 568
CC + +IQ +
Sbjct: 301 CCRTSPEDIQAL 312
>gi|422851690|ref|ZP_16898360.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK150]
gi|325694578|gb|EGD36487.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK150]
Length = 315
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 144/264 (54%), Gaps = 20/264 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ +LDG+ +++ DV G LWS+ YL +P+ + H ++RAG+DII +S YQ
Sbjct: 12 EIIILDGALGTELESRGY-DVSGK-LWSAQYLLDQPQIIQDVHESYVRAGSDIITTSSYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAAS 123
A++ + G + ++A DLL ++V L A + + +P+ + + L+ G S
Sbjct: 70 ASIPAFIEAGLAPEKAYDLLKETVFLAQKAIENVWQELSPEEQKQRPYPLIAG------S 123
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPY L DGSEY+G Y ++E + +HRP ++AL+ G D LA+ETIP EA A+
Sbjct: 124 VGPYAAYLADGSEYTGDY--QLSEGEFQEFHRPRIQALLEVGCDLLAIETIPNGAEAAAI 181
Query: 184 VKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++LL EFP +A+LSF + + S G I L Q+ A+G NC P ++
Sbjct: 182 LRLLAEEFPQAEAYLSFVAQSENAISDGTKIEE--LGNLAQESSQVLAVGFNCTAPHLIA 239
Query: 243 TLVRCIKQ--SHPTVQTIVYPNKG 264
L+ + Q + P + YPN G
Sbjct: 240 PLLDGLGQVCNKP---FLTYPNSG 260
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 148/316 (46%), Gaps = 31/316 (9%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIG 321
+ +LDG+ +++ DV G LWS+ YL +P+ + H ++R I T++
Sbjct: 13 IIILDGALGTELESRGY-DVSGK-LWSAQYLLDQPQIIQDVHESYVRAGSDIITTSSYQA 70
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-----T 376
+ G Y D + E +A +A + + P Q
Sbjct: 71 SIPAFIEAGLAPEKAY-DLLKETVFLAQ---------KAIENVWQELSPEEQKQRPYPLI 120
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S+GPY L DGSEY+G Y ++E + +HRP ++AL+ G D LA+ETIP EA
Sbjct: 121 AGSVGPYAAYLADGSEYTGDY--QLSEGEFQEFHRPRIQALLEVGCDLLAIETIPNGAEA 178
Query: 437 LALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
A+++LL EFP +A+LSF + + S G I L Q+ A+G NC P
Sbjct: 179 AAILRLLAEEFPQAEAYLSFVAQSENAISDGTKIEE--LGNLAQESSQVLAVGFNCTAPH 236
Query: 496 HVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEGVN 552
++ L+ + Q + P + YPN G ++ + W D E E S+L W +GV
Sbjct: 237 LIAPLLDGLGQVCNKP---FLTYPNSGETYNGLTKTWHDDPEQERSLLENSKLWQNQGVR 293
Query: 553 IIGGCCEVTSYEIQQM 568
+ GGCC +I Q+
Sbjct: 294 LFGGCCRTRPEDIAQL 309
>gi|291236400|ref|XP_002738127.1| PREDICTED: CG10621-like, partial [Saccoglossus kowalevskii]
Length = 170
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 105/175 (60%), Gaps = 15/175 (8%)
Query: 405 DLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTS 464
+LI WHR V+ +V G+DYLA ET+PA KEA A+V+LL+E+P KAW+SFSCKD HT
Sbjct: 1 ELINWHRETVDVIVNTGIDYLAFETVPALKEAEAIVQLLQEYPSTKAWISFSCKDGEHTC 60
Query: 465 HGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPN-----K 519
HGE S AV + A+ + A+G+NC P ++ +L++ + +VYPN
Sbjct: 61 HGEKFSDAVK--VAASSPSVVAVGINCTPPQYIKSLLKSSENEIGDKIFVVYPNGASYIG 118
Query: 520 GGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMR-IMID 573
GG+W E+ ++ YVP W+ G N IGGCC + S +IQ +R M+D
Sbjct: 119 GGLWKK-------NENNKNLCAYVPDWINAGANWIGGCCMIGSQQIQDIRQAMVD 166
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 78/124 (62%), Gaps = 3/124 (2%)
Query: 149 DLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTS 208
+LI WHR V+ +V G+DYLA ET+PA KEA A+V+LL+E+P KAW+SFSCKD HT
Sbjct: 1 ELINWHRETVDVIVNTGIDYLAFETVPALKEAEAIVQLLQEYPSTKAWISFSCKDGEHTC 60
Query: 209 HGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLL 268
HGE S AV + A+ + A+G+NC P ++ +L++ + +VYPN G +
Sbjct: 61 HGEKFSDAVK--VAASSPSVVAVGINCTPPQYIKSLLKSSENEIGDKIFVVYPN-GASYI 117
Query: 269 DGSF 272
G
Sbjct: 118 GGGL 121
>gi|417809469|ref|ZP_12456150.1| homocysteine methyltransferase [Lactobacillus salivarius GJ-24]
gi|335350393|gb|EGM51889.1| homocysteine methyltransferase [Lactobacillus salivarius GJ-24]
Length = 307
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 142/256 (55%), Gaps = 21/256 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ ++ + R + + LW++ L E E H+ + AGAD+I + YQANV
Sbjct: 13 VLDGAMSTPLER--LGADTNNDLWTAKALIDNEELVYEVHKMYFEAGADLIITDTYQANV 70
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK-ENQTPDINLNKTFNLLTGHIETAASIGPY 127
K+GYSE+EA +L+ K+V++ A+D EN+T H A +IGPY
Sbjct: 71 QAFEKVGYSEKEARNLIKKAVKIAQKARDDYENRT------------GKHNYIAGTIGPY 118
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L +GSEY G Y S+ E +H P +E LV A VD LA+ET P E LA+++LL
Sbjct: 119 GAYLANGSEYRGDYELSVEEYQ--QFHLPRIEELVNAEVDILAIETQPKLDEVLAILELL 176
Query: 188 RE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+E +P QK ++S++ DD S G + A+ + L + Q+ A+G+NCV+ V ++
Sbjct: 177 KEKYPQQKVYVSYTLSDDDTISDGTPLPRAIHA--LEDYSQVIAVGINCVKLELVEPALK 234
Query: 247 CIKQSHPTVQTIVYPN 262
+K+ IVYPN
Sbjct: 235 NMKEITDK-HLIVYPN 249
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 147/313 (46%), Gaps = 29/313 (9%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ ++ + R + + LW++ L E E H+ + E A + +
Sbjct: 13 VLDGAMSTPLER--LGADTNNDLWTAKALIDNEELVYEVHKMYF----EAGADL-----I 61
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT------AASI 380
+ D Y ++ + + + L++ V + ++T A +I
Sbjct: 62 ITDT------YQANVQAFEKVGYSEKEARNLIKKAVKIAQKARDDYENRTGKHNYIAGTI 115
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GPYG L +GSEY G Y S+ E +H P +E LV A VD LA+ET P E LA++
Sbjct: 116 GPYGAYLANGSEYRGDYELSVEEYQ--QFHLPRIEELVNAEVDILAIETQPKLDEVLAIL 173
Query: 441 KLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
+LL+E +P QK ++S++ DD S G + A+ + L + Q+ A+G+NCV+ V
Sbjct: 174 ELLKEKYPQQKVYVSYTLSDDDTISDGTPLPRAIHA--LEDYSQVIAVGINCVKLELVEP 231
Query: 500 LVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
++ +K+ IVYPN V+D W + + +P W E G IIGGCC
Sbjct: 232 ALKNMKEITDK-HLIVYPNSSAVYDPKSKTWSQPKTSATFEELIPNWYEAGARIIGGCCT 290
Query: 560 VTSYEIQQMRIMI 572
EI+ + I
Sbjct: 291 TGPKEIKAVADFI 303
>gi|162463923|ref|NP_001105011.1| homocysteine S-methyltransferase 1 [Zea mays]
gi|50400645|sp|Q9FUN0.1|HMT1_MAIZE RecName: Full=Homocysteine S-methyltransferase 1; AltName:
Full=S-methylmethionine:homocysteine methyltransferase
1; Short=SMM:Hcy S-methyltransferase 1; AltName:
Full=ZmHMT-1
gi|10732785|gb|AAG22537.1|AF297044_1 homocysteine S-methyltransferase-1 [Zea mays]
gi|194696762|gb|ACF82465.1| unknown [Zea mays]
gi|194697002|gb|ACF82585.1| unknown [Zea mays]
gi|195647426|gb|ACG43181.1| homocysteine S-methyltransferase 1 [Zea mays]
Length = 323
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 131/257 (50%), Gaps = 10/257 (3%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG F +Q+ D++ PLWS+ L T P E H ++ AGAD+I SS YQA +
Sbjct: 16 VIDGGFATQLEALG-ADIN-DPLWSAACLITRPHLVKEVHMQYLEAGADVIISSSYQATI 73
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G S EA DLL SV+L N A+D+ ++ +N AASIG YG
Sbjct: 74 PGFIARGMSVAEAEDLLRTSVKLANEARDEFWKSTLRKSKPIYN----RALVAASIGSYG 129
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEYSG Y +T L +HR ++ L AG D +A E IP + EA ALV+LL
Sbjct: 130 AYLADGSEYSGSYGADITAEKLKDFHRRRLQVLASAGPDLIAFEAIPNQMEAQALVELLE 189
Query: 189 EFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
E Q +W+ FS D + GE + + +L +++ +GVNC P + ++ C
Sbjct: 190 EEKVQIPSWICFSSVDGKNLCSGESFADCLK--ILNASEKVAVVGVNCTPPQFIEGII-C 246
Query: 248 IKQSHPTVQTIVYPNKG 264
+ VYPN G
Sbjct: 247 EFRKQTKKAIAVYPNSG 263
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 148/323 (45%), Gaps = 20/323 (6%)
Query: 254 TVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH 313
++ +V G ++DG F +Q+ D++ PLWS+ L T P E H ++
Sbjct: 3 VLEDLVARAGGCAVIDGGFATQLEALG-ADIN-DPLWSAACLITRPHLVKEVHMQYLEAG 60
Query: 314 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY----LALIK 369
+ S T+ G M+ A+ R +V+ A ++ L K
Sbjct: 61 ADVIISSSYQATI-------PGFIARGMSVAEAEDLLRTSVKLANEARDEFWKSTLRKSK 113
Query: 370 PSIS-SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE 428
P + + AASIG YG L DGSEYSG Y +T L +HR ++ L AG D +A E
Sbjct: 114 PIYNRALVAASIGSYGAYLADGSEYSGSYGADITAEKLKDFHRRRLQVLASAGPDLIAFE 173
Query: 429 TIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
IP + EA ALV+LL E Q +W+ FS D + GE + + +L +++ +
Sbjct: 174 AIPNQMEAQALVELLEEEKVQIPSWICFSSVDGKNLCSGESFADCLK--ILNASEKVAVV 231
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE--DEYSILHYVPQ 545
GVNC P + ++ C + VYPN G VWD +WL E S +
Sbjct: 232 GVNCTPPQFIEGII-CEFRKQTKKAIAVYPNSGEVWDGRAKRWLPVECLGHKSFDALAKR 290
Query: 546 WLEEGVNIIGGCCEVTSYEIQQM 568
W E G ++IGGCC T I+ +
Sbjct: 291 WQEAGASLIGGCCRTTPSTIRAV 313
>gi|188992347|ref|YP_001904357.1| homocysteine methyltransferase [Xanthomonas campestris pv.
campestris str. B100]
gi|167734107|emb|CAP52313.1| homocysteine S-methyltransferase [Xanthomonas campestris pv.
campestris]
Length = 320
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 149/311 (47%), Gaps = 15/311 (4%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
V G +LDG+ +++ + D LWS+ L +PE + HRD+ + A
Sbjct: 17 VLQRDGEVVLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAI 74
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAA 378
+ T G + A A +V +A D+LA + A
Sbjct: 75 TASYQATP-------QGFAARGLGLAQSQALIARSVALAAQARADHLAAHPQAAPLWVAG 127
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG L DGSEY G Y ++ A ++ +HRP + ALV AGVD LA ET+P+ E A
Sbjct: 128 SVGPYGAYLADGSEYRGDY--ALPVAQMLDFHRPRIAALVDAGVDLLACETLPSASEITA 185
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
L LL EFP AW SF+ +D H S G ++ V L A P Q+ A+G+NC+ V+
Sbjct: 186 LRLLLEEFPQVHAWFSFTLRDAAHLSDGTPLAQ-VIPALDACP-QVVAVGINCIAIEQVT 243
Query: 499 TLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQWLEEGVNIIGGC 557
++ + + ++ +VYPN G +D+ +W T S+ QW G +IGGC
Sbjct: 244 AALQSLA-ALTSLPLVVYPNSGEHYDASDKRWHAGTTVACSLATQRAQWHAAGARLIGGC 302
Query: 558 CEVTSYEIQQM 568
C T +I +
Sbjct: 303 CRTTPADIAAL 313
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 131/257 (50%), Gaps = 18/257 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + D LWS+ L +PE + HRD+ AGA ++ YQA
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASIGPY 127
G ++ L+ +SV L A+ D P + A S+GPY
Sbjct: 83 QGFAARGLGLAQSQALIARSVALAAQARADHLAAHPQ----------AAPLWVAGSVGPY 132
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y ++ A ++ +HRP + ALV AGVD LA ET+P+ E AL LL
Sbjct: 133 GAYLADGSEYRGDY--ALPVAQMLDFHRPRIAALVDAGVDLLACETLPSASEITALRLLL 190
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP AW SF+ +D H S G ++ V L A P Q+ A+G+NC+ V+ ++
Sbjct: 191 EEFPQVHAWFSFTLRDAAHLSDGTPLAQ-VIPALDACP-QVVAVGINCIAIEQVTAALQS 248
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + ++ +VYPN G
Sbjct: 249 LA-ALTSLPLVVYPNSG 264
>gi|401680632|ref|ZP_10812545.1| homocysteine S-methyltransferase [Veillonella sp. ACP1]
gi|400218368|gb|EJO49250.1| homocysteine S-methyltransferase [Veillonella sp. ACP1]
Length = 339
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 136/276 (49%), Gaps = 27/276 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+F +++ RH D LWSS L PE + H ++ AGADII+SS YQA V
Sbjct: 18 VLDGAFGTELERHGCNIHD--ELWSSKMLIENPEIIKKVHISYLAAGADIIESSGYQATV 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKD-----KEN------------QTPDINLNKTF 111
GY +EALDL+ SV+L A++ K N Q PD ++
Sbjct: 76 AGFKAHGYGTEEALDLVKLSVRLAVQARNEFLEAKANDALTLRGITLGEQLPDGSVRYFS 135
Query: 112 NLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 171
AAS+GPYG L DGSEY G Y + L +H P + D LA
Sbjct: 136 EGALPKPLVAASVGPYGAFLADGSEYRGDY--GVQTEYLEVFHIPRIALFCEENPDVLAC 193
Query: 172 ETIPAEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 228
ET+P EA+A+ + L + G AW+SFSCKD+ H S GE I ++ Q+
Sbjct: 194 ETVPCYDEAIAIARTLCDPLTTKGIPAWISFSCKDEHHISSGETIIKCAE--MIDKVRQV 251
Query: 229 QAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
IG+NC P +V +L++ I+ S VYPN G
Sbjct: 252 TGIGINCTAPEYVESLIKDIR-SVTNKPIAVYPNLG 286
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 147/336 (43%), Gaps = 39/336 (11%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
+ G +LDG+F +++ RH D LWSS L PE + H ++ +
Sbjct: 10 IVKENGPLVLDGAFGTELERHGCNIHD--ELWSSKMLIENPEIIKKVHISYLAAGADIIE 67
Query: 319 SIGPYGTV--------------------LRDGSEYSGHYVDSMTEADLIAWHRPNVEALV 358
S G TV +R + ++++ L E L
Sbjct: 68 SSGYQATVAGFKAHGYGTEEALDLVKLSVRLAVQARNEFLEAKANDALTLRGITLGEQLP 127
Query: 359 RAGVDYL---ALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVE 415
V Y AL KP + AAS+GPYG L DGSEY G Y + L +H P +
Sbjct: 128 DGSVRYFSEGALPKPLV----AASVGPYGAFLADGSEYRGDY--GVQTEYLEVFHIPRIA 181
Query: 416 ALVRAGVDYLALETIPAEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSA 472
D LA ET+P EA+A+ + L + G AW+SFSCKD+ H S GE I
Sbjct: 182 LFCEENPDVLACETVPCYDEAIAIARTLCDPLTTKGIPAWISFSCKDEHHISSGETIIKC 241
Query: 473 VTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLD 532
++ Q+ IG+NC P +V +L++ I+ S VYPN G +D W
Sbjct: 242 AE--MIDKVRQVTGIGINCTAPEYVESLIKDIR-SVTNKPIAVYPNLGETYDGETKTW-- 296
Query: 533 TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+ + S + YV W + G NIIGGCC I+++
Sbjct: 297 SGGQQSFIDYVDVWRKAGANIIGGCCRTNPDIIREV 332
>gi|303231518|ref|ZP_07318247.1| putative Homocysteine S-methyltransferase [Veillonella atypica
ACS-049-V-Sch6]
gi|302513764|gb|EFL55777.1| putative Homocysteine S-methyltransferase [Veillonella atypica
ACS-049-V-Sch6]
Length = 339
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 136/276 (49%), Gaps = 27/276 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+F +++ RH D LWSS L PE + H ++ AGADII+SS YQA V
Sbjct: 18 VLDGAFGTELERHGCNIHD--ELWSSKMLIENPEIIKKVHISYLAAGADIIESSGYQATV 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKD-----KEN------------QTPDINLNKTF 111
GY +EALDL+ SV+L A++ K N Q PD ++
Sbjct: 76 AGFKAHGYGTEEALDLVKLSVRLAVQARNEFLEAKANDALTLRGITLGEQLPDGSVRYFS 135
Query: 112 NLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 171
AAS+GPYG L DGSEY G Y + L +H P + D LA
Sbjct: 136 EGALPKPLVAASVGPYGAFLADGSEYRGDY--GVQTEYLEVFHIPRIALFCEENPDVLAC 193
Query: 172 ETIPAEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 228
ET+P EA+A+ + L + G AW+SFSCKD+ H S GE I ++ Q+
Sbjct: 194 ETVPCYDEAIAIARALCDPLTTKGIPAWISFSCKDEHHISSGETIIKCAE--MIDKVRQV 251
Query: 229 QAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
IG+NC P +V +L++ I+ S VYPN G
Sbjct: 252 TGIGINCTAPEYVESLIKDIR-SVTNKPIAVYPNLG 286
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 147/336 (43%), Gaps = 39/336 (11%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
+ G +LDG+F +++ RH D LWSS L PE + H ++ +
Sbjct: 10 IVKGNGPLVLDGAFGTELERHGCNIHD--ELWSSKMLIENPEIIKKVHISYLAAGADIIE 67
Query: 319 SIGPYGTV--------------------LRDGSEYSGHYVDSMTEADLIAWHRPNVEALV 358
S G TV +R + ++++ L E L
Sbjct: 68 SSGYQATVAGFKAHGYGTEEALDLVKLSVRLAVQARNEFLEAKANDALTLRGITLGEQLP 127
Query: 359 RAGVDYL---ALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVE 415
V Y AL KP + AAS+GPYG L DGSEY G Y + L +H P +
Sbjct: 128 DGSVRYFSEGALPKPLV----AASVGPYGAFLADGSEYRGDY--GVQTEYLEVFHIPRIA 181
Query: 416 ALVRAGVDYLALETIPAEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSA 472
D LA ET+P EA+A+ + L + G AW+SFSCKD+ H S GE I
Sbjct: 182 LFCEENPDVLACETVPCYDEAIAIARALCDPLTTKGIPAWISFSCKDEHHISSGETIIKC 241
Query: 473 VTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLD 532
++ Q+ IG+NC P +V +L++ I+ S VYPN G +D W
Sbjct: 242 AE--MIDKVRQVTGIGINCTAPEYVESLIKDIR-SVTNKPIAVYPNLGETYDGEAKTW-- 296
Query: 533 TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+ + S + YV W + G NIIGGCC IQ++
Sbjct: 297 SGGQQSFIDYVDVWRKAGANIIGGCCRTNPDIIQEV 332
>gi|429759196|ref|ZP_19291700.1| homocysteine S-methyltransferase [Veillonella atypica KON]
gi|429180404|gb|EKY21625.1| homocysteine S-methyltransferase [Veillonella atypica KON]
Length = 339
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 136/276 (49%), Gaps = 27/276 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+F +++ RH D LWSS L PE + H ++ AGADII+SS YQA V
Sbjct: 18 VLDGAFGTELERHGCNIHD--ELWSSKMLIENPEIIKKVHISYLAAGADIIESSGYQATV 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKD-----KEN------------QTPDINLNKTF 111
GY +EALDL+ SV+L A++ K N Q PD ++
Sbjct: 76 AGFKAHGYGTEEALDLVKLSVRLAVQARNEFLEAKANDALTLRGITLGEQLPDGSVRYFS 135
Query: 112 NLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 171
AAS+GPYG L DGSEY G Y + L +H P + D LA
Sbjct: 136 EGALPKPLVAASVGPYGAFLADGSEYRGDY--GVQTEYLEVFHIPRIALFCEENPDVLAC 193
Query: 172 ETIPAEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 228
ET+P EA+A+ + L + G AW+SFSCKD+ H S GE I ++ Q+
Sbjct: 194 ETVPCYDEAIAIARTLCDPLTTKGIPAWISFSCKDEHHISSGETIIKCAE--MIDKVRQV 251
Query: 229 QAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
IG+NC P +V +L++ I+ S VYPN G
Sbjct: 252 TGIGINCTAPEYVESLIKDIR-SVTNKPIAVYPNLG 286
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 147/336 (43%), Gaps = 39/336 (11%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
+ G +LDG+F +++ RH D LWSS L PE + H ++ +
Sbjct: 10 IVKENGPLVLDGAFGTELERHGCNIHD--ELWSSKMLIENPEIIKKVHISYLAAGADIIE 67
Query: 319 SIGPYGTV--------------------LRDGSEYSGHYVDSMTEADLIAWHRPNVEALV 358
S G TV +R + ++++ L E L
Sbjct: 68 SSGYQATVAGFKAHGYGTEEALDLVKLSVRLAVQARNEFLEAKANDALTLRGITLGEQLP 127
Query: 359 RAGVDYL---ALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVE 415
V Y AL KP + AAS+GPYG L DGSEY G Y + L +H P +
Sbjct: 128 DGSVRYFSEGALPKPLV----AASVGPYGAFLADGSEYRGDY--GVQTEYLEVFHIPRIA 181
Query: 416 ALVRAGVDYLALETIPAEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSA 472
D LA ET+P EA+A+ + L + G AW+SFSCKD+ H S GE I
Sbjct: 182 LFCEENPDVLACETVPCYDEAIAIARTLCDPLTTKGIPAWISFSCKDEHHISSGETIIKC 241
Query: 473 VTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLD 532
++ Q+ IG+NC P +V +L++ I+ S VYPN G +D W
Sbjct: 242 AE--MIDKVRQVTGIGINCTAPEYVESLIKDIR-SVTNKPIAVYPNLGETYDGETKTW-- 296
Query: 533 TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+ + S + Y+ W + G NIIGGCC IQ++
Sbjct: 297 SGGQQSFIDYIDVWRKAGANIIGGCCRTNPDIIQEI 332
>gi|297203247|ref|ZP_06920644.1| homocysteine methyltransferase [Streptomyces sviceus ATCC 29083]
gi|197711333|gb|EDY55367.1| homocysteine methyltransferase [Streptomyces sviceus ATCC 29083]
Length = 313
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/260 (37%), Positives = 135/260 (51%), Gaps = 27/260 (10%)
Query: 9 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG ++Q+ + H + D LWS+ L PEA E H + AGAD+ +S YQA
Sbjct: 26 VLDGGMSNQLESAGHDLSD----ELWSARLLAERPEAITEAHLAYYEAGADVAITSSYQA 81
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ K G + A +LL SV L A++ Q + + + AAS+GP
Sbjct: 82 TFEGFAKRGIGRERAAELLALSVGL---AQEATRQAQAKGVRRPLYV-------AASVGP 131
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L DGSEY G Y ++ A+L A+HRP +E L AG D LALETIP EA AL++
Sbjct: 132 YGAMLADGSEYRGRY--GLSVAELEAFHRPRLEVLAAAGPDVLALETIPDSDEAQALLRA 189
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R G AWLS+S D T G+ + A L A+ D++ A+GVNC P V +
Sbjct: 190 VRGL-GVPAWLSYSVAGD-RTRAGQPLEEAF--ALAADVDEVIAVGVNCCVPEDVDNAIE 245
Query: 247 CIKQ--SHPTVQTIVYPNKG 264
+ P V VYPN G
Sbjct: 246 TAARVTGKPVV---VYPNSG 262
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 143/305 (46%), Gaps = 35/305 (11%)
Query: 264 GVKLLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
G +LDG ++Q+ + H + D LWS+ L PEA E H + + A +
Sbjct: 23 GPVVLDGGMSNQLESAGHDLSD----ELWSARLLAERPEAITEAHLAYYEAGADVAITSS 78
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
T ++ + A+L+A + R + +P AAS+G
Sbjct: 79 YQATF----EGFAKRGIGRERAAELLALSVGLAQEATRQ-AQAKGVRRPLY---VAASVG 130
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG +L DGSEY G Y ++ A+L A+HRP +E L AG D LALETIP EA AL++
Sbjct: 131 PYGAMLADGSEYRGRY--GLSVAELEAFHRPRLEVLAAAGPDVLALETIPDSDEAQALLR 188
Query: 442 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
+R G AWLS+S D T G+ + A L A+ D++ A+GVNC P V +
Sbjct: 189 AVRGL-GVPAWLSYSVAGD-RTRAGQPLEEAF--ALAADVDEVIAVGVNCCVPEDVDNAI 244
Query: 502 RCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLD----TEDEYSILHYVPQWLEEGVNIIG 555
+ P V VYPN G W++ +W T DE V W G +IG
Sbjct: 245 ETAARVTGKPVV---VYPNSGETWNAGARRWEGRSSFTSDE------VMGWRASGARLIG 295
Query: 556 GCCEV 560
GCC V
Sbjct: 296 GCCRV 300
>gi|227511098|ref|ZP_03941147.1| homocysteine methyltransferase [Lactobacillus buchneri ATCC 11577]
gi|227523282|ref|ZP_03953331.1| homocysteine methyltransferase [Lactobacillus hilgardii ATCC 8290]
gi|227085580|gb|EEI20892.1| homocysteine methyltransferase [Lactobacillus buchneri ATCC 11577]
gi|227089562|gb|EEI24874.1| homocysteine methyltransferase [Lactobacillus hilgardii ATCC 8290]
Length = 315
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/259 (36%), Positives = 138/259 (53%), Gaps = 15/259 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ +H + + LWS+ L +P+A H + AGADI + YQANV
Sbjct: 16 VLDGAMATELEKHGVDT--SNDLWSATALINDPDAVKAVHTSYFEAGADITITDTYQANV 73
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQT-PDINLNK-TFNLLTGHIETAASIGP 126
+ K+G++E ++ L+ ++V+L ++D T P K F L A S+GP
Sbjct: 74 EAFKKVGFTEDQSEKLITEAVRLALESRDDFYATLPTAERAKRAFYPL-----VAGSVGP 128
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY+GHY +T +H+ + + AGVD A ET P +E AL L
Sbjct: 129 YGAYLADGSEYTGHY--QLTNEAYQTFHQRRMRLMDEAGVDVFAFETQPNFEETKALADL 186
Query: 187 LRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
LRE F + AWL+FS KD H G ++ AV S NP QI A+GVNC + + +
Sbjct: 187 LREKFSDRFAWLTFSIKDPEHLCDGTSLAKAV-SYFEDNP-QISAVGVNCTSMNLIEDSI 244
Query: 246 RCIKQSHPTVQTIVYPNKG 264
+ I S+ IVYPN G
Sbjct: 245 KTI-ASNTNKPIIVYPNNG 262
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 152/325 (46%), Gaps = 43/325 (13%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFI----------- 310
+K +LDG+ +++ +H + + LWS+ L +P+A H +
Sbjct: 11 SKRALVLDGAMATELEKHGVDT--SNDLWSATALINDPDAVKAVHTSYFEAGADITITDT 68
Query: 311 -RGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWH-RPNVEALV----RAGVDY 364
+ ++E +G D SE +TEA +A R + A + RA +
Sbjct: 69 YQANVEAFKKVG----FTEDQSE------KLITEAVRLALESRDDFYATLPTAERAKRAF 118
Query: 365 LALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY 424
L+ A S+GPYG L DGSEY+GHY +T +H+ + + AGVD
Sbjct: 119 YPLV--------AGSVGPYGAYLADGSEYTGHY--QLTNEAYQTFHQRRMRLMDEAGVDV 168
Query: 425 LALETIPAEKEALALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQ 483
A ET P +E AL LLRE F + AWL+FS KD H G ++ AV S NP Q
Sbjct: 169 FAFETQPNFEETKALADLLREKFSDRFAWLTFSIKDPEHLCDGTSLAKAV-SYFEDNP-Q 226
Query: 484 IQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYV 543
I A+GVNC + + ++ I S+ IVYPN G ++D W + +
Sbjct: 227 ISAVGVNCTSMNLIEDSIKTI-ASNTNKPIIVYPNNGDIYDPKTKTWTPNPNATTFAELT 285
Query: 544 PQWLEEGVNIIGGCCEVTSYEIQQM 568
P+WL G I+GGCC T +I+Q+
Sbjct: 286 PKWLAAGAKIVGGCCRTTPVDIEQV 310
>gi|366052165|ref|ZP_09449887.1| homocysteine methyltransferase [Lactobacillus suebicus KCTC 3549]
Length = 308
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 150/309 (48%), Gaps = 23/309 (7%)
Query: 269 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLR 328
DG+ +++ + ++ +D + LWS+ L +P A H + ASI T
Sbjct: 19 DGAMATELEKRGVQ-ID-NELWSATALLKDPGAVQAVHESYFFA----GASIATTNT--- 69
Query: 329 DGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLR 388
+ + AD H V + +A + + S A S+GPYG L
Sbjct: 70 -------YQANLPVFADFGINHDDGVALIEQAVILAQHAVAGDDSKLIAGSVGPYGAYLA 122
Query: 389 DGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-REFP 447
DGSEY+G Y S+++ + +HRP ++AL AGVD+ A ET+P +E ALV+LL EFP
Sbjct: 123 DGSEYTGDY--SLSKQEYQDFHRPRMQALYDAGVDFFAFETMPNFEETKALVELLTNEFP 180
Query: 448 GQKAWLSFSCKDDTHT-SHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
AWLSFS D T G ++ A + D + A+GVNC ++++ + I
Sbjct: 181 TMTAWLSFSIGDRTDKLCDGTELTKATE--YFNDNDNVIAVGVNCTNLTNITAAINRIDD 238
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQ 566
+VYPN G ++DS W D + VP+W+ G IIGGCC T +I
Sbjct: 239 VTDKA-IVVYPNNGDIYDSDTKTWRTGIDAPTFTDLVPEWINAGAQIIGGCCRTTPDDIA 297
Query: 567 QMRIMIDEF 575
+++ ++EF
Sbjct: 298 EIQRSVNEF 306
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 131/256 (51%), Gaps = 25/256 (9%)
Query: 11 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDN 70
DG+ +++ + ++ +D + LWS+ L +P A H + AGA I ++ YQAN+
Sbjct: 19 DGAMATELEKRGVQ-ID-NELWSATALLKDPGAVQAVHESYFFAGASIATTNTYQANLPV 76
Query: 71 LTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
G + + + L+ ++V L A ++ L+ G S+GPYG
Sbjct: 77 FADFGINHDDGVALIEQAVILAQHAVAGDDS----------KLIAG------SVGPYGAY 120
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-RE 189
L DGSEY+G Y S+++ + +HRP ++AL AGVD+ A ET+P +E ALV+LL E
Sbjct: 121 LADGSEYTGDY--SLSKQEYQDFHRPRMQALYDAGVDFFAFETMPNFEETKALVELLTNE 178
Query: 190 FPGQKAWLSFSCKDDTHT-SHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
FP AWLSFS D T G ++ A + D + A+GVNC ++++ + I
Sbjct: 179 FPTMTAWLSFSIGDRTDKLCDGTELTKATE--YFNDNDNVIAVGVNCTNLTNITAAINRI 236
Query: 249 KQSHPTVQTIVYPNKG 264
+VYPN G
Sbjct: 237 DDVTDKA-IVVYPNNG 251
>gi|289670250|ref|ZP_06491325.1| homocysteine methyltransferase [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 321
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 163/333 (48%), Gaps = 30/333 (9%)
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE 300
++ L R + + P Q + + G +LDG+ +++ + D LWS+ L +P+
Sbjct: 1 MTILPRHPRANAPFSQALQH--DGYVVLDGALATELEQRGCDLND--TLWSARVLMEQPQ 56
Query: 301 ACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 360
+ HRD+ + A + T L ++ +D LIA +VE V+A
Sbjct: 57 LIYQVHRDYFAAGAQCAITASYQATPL----GFAARGLDVAQSQALIA---RSVELAVQA 109
Query: 361 GVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 420
D+L + S+GPYG L DGSEY G YV + + L+ +HRP + +L A
Sbjct: 110 RADHLHAQPQAAPLWVVGSVGPYGAYLADGSEYRGDYVLPVEQ--LMDFHRPRIASLAEA 167
Query: 421 GVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 479
GVD LA ET+PA E +AL +LL+ EFP AW SF+ +D H S G ++ V + L
Sbjct: 168 GVDLLACETLPAAGEIVALRRLLQHEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LD 225
Query: 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-------LD 532
Q+ AIG+NC+ V+ + + + + +VYPN G +D+ +W L
Sbjct: 226 ACTQVIAIGINCIALDQVTDALHSLS-ALTALPLVVYPNSGEHYDASDKRWHAGHGTALT 284
Query: 533 TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
D+++ QWL G ++GGCC T +I
Sbjct: 285 LADQHA------QWLAAGARLVGGCCRTTPRDI 311
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 131/258 (50%), Gaps = 19/258 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + D LWS+ L +P+ + HRD+ AGA ++ YQA
Sbjct: 25 VLDGALATELEQRGCDLND--TLWSARVLMEQPQLIYQVHRDYFAAGAQCAITASYQATP 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASIGPY 127
G ++ L+ +SV+L A+ D + P + S+GPY
Sbjct: 83 LGFAARGLDVAQSQALIARSVELAVQARADHLHAQPQ----------AAPLWVVGSVGPY 132
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G YV + + L+ +HRP + +L AGVD LA ET+PA E +AL +LL
Sbjct: 133 GAYLADGSEYRGDYVLPVEQ--LMDFHRPRIASLAEAGVDLLACETLPAAGEIVALRRLL 190
Query: 188 R-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+ EFP AW SF+ +D H S G ++ V + L Q+ AIG+NC+ V+ +
Sbjct: 191 QHEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LDACTQVIAIGINCIALDQVTDALH 248
Query: 247 CIKQSHPTVQTIVYPNKG 264
+ + + +VYPN G
Sbjct: 249 SLS-ALTALPLVVYPNSG 265
>gi|220911917|ref|YP_002487226.1| homocysteine methyltransferase [Arthrobacter chlorophenolicus A6]
gi|219858795|gb|ACL39137.1| homocysteine S-methyltransferase [Arthrobacter chlorophenolicus A6]
Length = 319
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 144/292 (49%), Gaps = 20/292 (6%)
Query: 30 PLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSV 89
PLWS+ L P + HRD+ AGA I ++ YQA G +EQEALDL+ SV
Sbjct: 43 PLWSAKVLLEHPGLIRDVHRDYFAAGARIATTASYQATPQGFAARGMTEQEALDLVALSV 102
Query: 90 QLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD 149
+L + A+ +++ F A S+GPYG L DGSEY G Y ++T A+
Sbjct: 103 RLADEAR-RDHLANQSEARPLF--------IAGSVGPYGAYLADGSEYRGDY--ALTPAE 151
Query: 150 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSH 209
+HRP +EALV +G D LA ET+P+ EA AL +L R+ G ++W SFS +D H S
Sbjct: 152 FRDFHRPRLEALVESGADALACETLPSFAEARALAELTRDL-GVESWFSFSLRDAGHISD 210
Query: 210 GELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLD 269
G + A + LL + A+GVNCV + V+ + ++ + YPN G
Sbjct: 211 GTPL--AAVAELLDGESHVAAVGVNCVPLALVAPALTALRGGTGK-PLVAYPNSGETYDA 267
Query: 270 GSFT---SQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDF--IRGHIET 316
G+ T + + DG P W ++ C T D + GH+ +
Sbjct: 268 GTKTWDAAPAATAPAALADGVPAWQALGARIIGGCCRTTPADISAVAGHVNS 319
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 150/324 (46%), Gaps = 19/324 (5%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
I ++PT+ ++ + + + DG+ +++ D PLWS+ L P + HR
Sbjct: 6 IMPANPTLSALLETGETL-VTDGALATELEDRGCNLDD--PLWSAKVLLEHPGLIRDVHR 62
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ A + T G MTE + + +V A D+LA
Sbjct: 63 DYFAAGARIATTASYQATP-------QGFAARGMTEQEALDLVALSVRLADEARRDHLAN 115
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ A S+GPYG L DGSEY G Y ++T A+ +HRP +EALV +G D LA
Sbjct: 116 QSEARPLFIAGSVGPYGAYLADGSEYRGDY--ALTPAEFRDFHRPRLEALVESGADALAC 173
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P+ EA AL +L R+ G ++W SFS +D H S G + A + LL + A+
Sbjct: 174 ETLPSFAEARALAELTRDL-GVESWFSFSLRDAGHISDGTPL--AAVAELLDGESHVAAV 230
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW---LDTEDEYSILHYVP 544
GVNCV + V+ + ++ + YPN G +D+ W ++ VP
Sbjct: 231 GVNCVPLALVAPALTALRGGTGK-PLVAYPNSGETYDAGTKTWDAAPAATAPAALADGVP 289
Query: 545 QWLEEGVNIIGGCCEVTSYEIQQM 568
W G IIGGCC T +I +
Sbjct: 290 AWQALGARIIGGCCRTTPADISAV 313
>gi|114328640|ref|YP_745797.1| homocysteine methyltransferase [Granulibacter bethesdensis CGDNIH1]
gi|114316814|gb|ABI62874.1| homocysteine S-methyltransferase [Granulibacter bethesdensis
CGDNIH1]
Length = 313
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 133/263 (50%), Gaps = 27/263 (10%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ R D PLWS L P A HR ++ AGAD I+++ YQ ++
Sbjct: 16 LLDGALATELERAGYHLDD--PLWSGRLLLDNPAAIAAVHRAYLEAGADCIETASYQLSL 73
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGP 126
L + G S A+ +L + +L S +D N+ L+ G S+GP
Sbjct: 74 PGLQRRGLSRGRAMSVLADAARLACSVRDDVWAGLPAAQRRNRIRPLVAG------SLGP 127
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG DGSEY+G Y +++ + +A+H P + AL G D +A ET+P EALA L
Sbjct: 128 YGACQADGSEYTGRY--ALSRSQYLAFHAPRMRALAAGGADLIACETVPHLDEALAFADL 185
Query: 187 LREF--PGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIGVNCVRPSHV 241
L+ PG W+SFS +D H + G L A+ SC + AIG+NC P V
Sbjct: 186 LQALSVPG---WVSFSVRDAAHIADGTPLRLCVQAMASCPF-----VAAIGINCTDPVLV 237
Query: 242 STLVRCIKQSHPTVQTIVYPNKG 264
L+RC+++ + IVYPN G
Sbjct: 238 PALIRCLRRG--GLPVIVYPNAG 258
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 151/315 (47%), Gaps = 30/315 (9%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIGPY 323
LLDG+ +++ R D PLWS L P A HR ++ IETA+
Sbjct: 16 LLDGALATELERAGYHLDD--PLWSGRLLLDNPAAIAAVHRAYLEAGADCIETASYQLSL 73
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPY 383
+ R G G + + +A +A +V V AG+ A + I A S+GPY
Sbjct: 74 PGLQRRGLS-RGRAMSVLADAARLAC---SVRDDVWAGLPA-AQRRNRIRPLVAGSLGPY 128
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G DGSEY+G Y +++ + +A+H P + AL G D +A ET+P EALA LL
Sbjct: 129 GACQADGSEYTGRY--ALSRSQYLAFHAPRMRALAAGGADLIACETVPHLDEALAFADLL 186
Query: 444 REF--PGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
+ PG W+SFS +D H + G L A+ SC + AIG+NC P V
Sbjct: 187 QALSVPG---WVSFSVRDAAHIADGTPLRLCVQAMASCPF-----VAAIGINCTDPVLVP 238
Query: 499 TLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE-DEYSILHYVPQWLEEGVNIIGGC 557
L+RC+++ + IVYPN G +D V W D+++ WL G I+GGC
Sbjct: 239 ALIRCLRRG--GLPVIVYPNAGEPFDLVTRCWGHRRSDDWA--EQARSWLRLGARIVGGC 294
Query: 558 CEVTSYEIQQMRIMI 572
C +I+ +R +I
Sbjct: 295 CRTRPDDIRALRRLI 309
>gi|422860215|ref|ZP_16906859.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK330]
gi|327470113|gb|EGF15577.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK330]
Length = 315
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 146/264 (55%), Gaps = 20/264 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ +LDG+ +++ DV G LWS+ YL +P+ + H ++RAG+DII +S YQ
Sbjct: 12 EIIILDGALGTELESRGY-DVSGK-LWSAQYLLDQPQIIQDVHESYVRAGSDIITTSSYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAAS 123
A++ + G + ++ DLL ++V L A + + +P+ +++ L+ G S
Sbjct: 70 ASIPAFIEAGLTPEKGYDLLKETVFLAQKAIENVWQELSPEEQKQRSYPLVAG------S 123
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPY L DGSEY+G+Y ++EA+ +H P ++AL+ AG D LA+ETIP EA A+
Sbjct: 124 VGPYAAYLADGSEYTGNY--QLSEAEFREFHCPRIQALLEAGSDLLAIETIPNGAEAAAI 181
Query: 184 VKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++LL EFP +A+LSF + + S G I L Q+ A+G NC P ++
Sbjct: 182 LRLLAEEFPQAEAYLSFVAQSENAISDGTKIEE--LGNLAQESPQVLAVGFNCTAPHLIA 239
Query: 243 TLVRCIKQ--SHPTVQTIVYPNKG 264
L+ + Q + P + YPN G
Sbjct: 240 PLLDALGQVCNKP---FLTYPNSG 260
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 150/316 (47%), Gaps = 31/316 (9%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIG 321
+ +LDG+ +++ DV G LWS+ YL +P+ + H ++R I T++
Sbjct: 13 IIILDGALGTELESRGY-DVSGK-LWSAQYLLDQPQIIQDVHESYVRAGSDIITTSSYQA 70
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-----T 376
+ G Y D + E +A +A + + P Q
Sbjct: 71 SIPAFIEAGLTPEKGY-DLLKETVFLAQ---------KAIENVWQELSPEEQKQRSYPLV 120
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S+GPY L DGSEY+G+Y ++EA+ +H P ++AL+ AG D LA+ETIP EA
Sbjct: 121 AGSVGPYAAYLADGSEYTGNY--QLSEAEFREFHCPRIQALLEAGSDLLAIETIPNGAEA 178
Query: 437 LALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
A+++LL EFP +A+LSF + + S G I L Q+ A+G NC P
Sbjct: 179 AAILRLLAEEFPQAEAYLSFVAQSENAISDGTKIEE--LGNLAQESPQVLAVGFNCTAPH 236
Query: 496 HVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEGVN 552
++ L+ + Q + P + YPN G ++ + W D E E S+L W +GV
Sbjct: 237 LIAPLLDALGQVCNKP---FLTYPNSGETYNGLTKTWHDDPEQERSLLENSKLWQNQGVR 293
Query: 553 IIGGCCEVTSYEIQQM 568
+ GGCC +I Q+
Sbjct: 294 LFGGCCRTRPEDIAQL 309
>gi|418515690|ref|ZP_13081869.1| homocysteine methyltransferase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|410707599|gb|EKQ66050.1| homocysteine methyltransferase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 321
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 30/333 (9%)
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE 300
++ L R + + P Q + + G +LDG+ +++ + D LWS+ L +PE
Sbjct: 1 MTILPRQPRANAPFSQALQH--DGYVVLDGALATELEQRGCDLNDA--LWSARVLMEQPE 56
Query: 301 ACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 360
+ HRD+ + A + T L ++ +D LIA +V ++A
Sbjct: 57 LIYQVHRDYFAAGAQCAITASYQATPL----GFAARGLDVAQAQALIA---RSVALAMQA 109
Query: 361 GVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 420
D+L L + A S+GPYG L DGSEY G YV + + L+ +HRP + AL A
Sbjct: 110 RADHLTLHPHAAPLWVAGSVGPYGAYLADGSEYRGDYVLPIEQ--LMDFHRPRIAALAEA 167
Query: 421 GVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 479
GVD LA ET+P+ E +AL +LLR EFP AW SF+ +D H S G ++ V + L
Sbjct: 168 GVDLLACETLPSASEIVALRQLLRHEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LD 225
Query: 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-------LD 532
Q+ A+G+NC+ + + + + + +VYPN G +D+ +W L
Sbjct: 226 ACAQVIAVGINCIALDQATAALHSLS-ALTALPLVVYPNSGEHYDASDKRWHAGRGAALT 284
Query: 533 TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
D+++ WL G +IGGCC +I
Sbjct: 285 LADQHA------HWLAAGARLIGGCCRTAPRDI 311
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 130/257 (50%), Gaps = 17/257 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + D LWS+ L +PE + HRD+ AGA ++ YQA
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G +A L+ +SV L A+ + T + + A S+GPYG
Sbjct: 83 LGFAARGLDVAQAQALIARSVALAMQARAD---------HLTLHPHAAPLWVAGSVGPYG 133
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV + + L+ +HRP + AL AGVD LA ET+P+ E +AL +LLR
Sbjct: 134 AYLADGSEYRGDYVLPIEQ--LMDFHRPRIAALAEAGVDLLACETLPSASEIVALRQLLR 191
Query: 189 -EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP AW SF+ +D H S G ++ V + L Q+ A+G+NC+ + +
Sbjct: 192 HEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LDACAQVIAVGINCIALDQATAALHS 249
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + + +VYPN G
Sbjct: 250 LS-ALTALPLVVYPNSG 265
>gi|417750211|ref|ZP_12398580.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Mycobacterium avium
subsp. paratuberculosis S397]
gi|336458287|gb|EGO37267.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Mycobacterium avium
subsp. paratuberculosis S397]
Length = 306
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/258 (37%), Positives = 131/258 (50%), Gaps = 29/258 (11%)
Query: 9 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
LLDG +++ H + D PLWS+ L P+ V H + RAGA I ++ YQA
Sbjct: 15 LLDGGLATELEARGHDLSD----PLWSARLLADAPQEIVAVHAAYFRAGAMIATTASYQA 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G S + LL +SV+L +A+D+ + GH+ AAS+GP
Sbjct: 71 SFEGFAARGISRSDTAGLLRRSVELAKAARDEAG-------------VAGHV--AASVGP 115
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y S+ + L WHRP +E L A D LA+ETIP EA ALV L
Sbjct: 116 YGAALADGSEYRGRYGISVRQ--LEDWHRPRLEVLAGADADVLAVETIPDVDEAEALVNL 173
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R G AWLS++ D HT G+ ++ A + A +I A+GVNC P V +
Sbjct: 174 VRSL-GVPAWLSYTI-DGAHTRAGQPLADAFA--VAAGVPEIVAVGVNCCAPDDVLPTIE 229
Query: 247 CIKQSHPTVQTIVYPNKG 264
V IVYPN G
Sbjct: 230 IAAAIGKPV--IVYPNSG 245
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 150/318 (47%), Gaps = 30/318 (9%)
Query: 254 TVQTIVYPNKGVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIR 311
+ + +P+ V LLDG +++ H + D PLWS+ L P+ V H + R
Sbjct: 3 SARGFTWPSDPV-LLDGGLATELEARGHDLSD----PLWSARLLADAPQEIVAVHAAYFR 57
Query: 312 GHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPS 371
A T + + G ++ +D R +VE L +A D +
Sbjct: 58 AGAMIA-------TTASYQASFEGFAARGISRSDTAGLLRRSVE-LAKAARD-----EAG 104
Query: 372 ISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
++ AAS+GPYG L DGSEY G Y S+ + L WHRP +E L A D LA+ETIP
Sbjct: 105 VAGHVAASVGPYGAALADGSEYRGRYGISVRQ--LEDWHRPRLEVLAGADADVLAVETIP 162
Query: 432 AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 491
EA ALV L+R G AWLS++ D HT G+ ++ A + A +I A+GVNC
Sbjct: 163 DVDEAEALVNLVRSL-GVPAWLSYTI-DGAHTRAGQPLADAFA--VAAGVPEIVAVGVNC 218
Query: 492 VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGV 551
P V + V IVYPN G WD++ W + L +W+ G
Sbjct: 219 CAPDDVLPTIEIAAAIGKPV--IVYPNSGEHWDALRHNWTGPSRFSAPL--AARWISAGA 274
Query: 552 NIIGGCCEVTSYEIQQMR 569
I+GGCC+V +I +R
Sbjct: 275 RIVGGCCQVRPTDIAAVR 292
>gi|270262976|ref|ZP_06191247.1| homocysteine methyltransferase [Serratia odorifera 4Rx13]
gi|270043660|gb|EFA16753.1| homocysteine methyltransferase [Serratia odorifera 4Rx13]
Length = 312
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 160/316 (50%), Gaps = 16/316 (5%)
Query: 254 TVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH 313
TV ++ N+ + +LDG+ +++ D PLWS+ L PE + H D+
Sbjct: 6 TVAALLAANRTL-ILDGALATELEARGCDLSD--PLWSAKVLIENPELIYQVHLDYFNAG 62
Query: 314 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSIS 373
+ A + T L G + + +A +V+ +A DYLA +
Sbjct: 63 AQCAITASYQATPL-------GFLRRGLNQQQSLALIAKSVQLAQQARSDYLAQHPQAAP 115
Query: 374 SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
A S+GPYG L DGSEY G Y S+ + ++IA+HRP + AL AGVD LA ET+P+
Sbjct: 116 LLIAGSVGPYGAYLADGSEYRGDY--SLPQEEMIAFHRPRIAALAEAGVDLLACETLPSF 173
Query: 434 KEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
E AL+ LL+EFP AW +F+ +D H S G ++ V + L NP Q+ AIG+NC+
Sbjct: 174 SELQALLALLQEFPTLGAWFAFTLRDSQHLSDGTPLTQ-VLAALRGNP-QVLAIGINCIA 231
Query: 494 PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQWLEEGVN 552
+V+ + + + +VYPN G +D+V W S++ + +W G
Sbjct: 232 LENVTPALSQLA-TLTDKPLLVYPNSGEHYDAVSKTWHACGGGSSSLIEQIGEWQNIGAR 290
Query: 553 IIGGCCEVTSYEIQQM 568
+IGGCC T +I+Q+
Sbjct: 291 LIGGCCRTTPQDIRQI 306
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 139/260 (53%), Gaps = 18/260 (6%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ +LDG+ +++ D PLWS+ L PE + H D+ AGA ++ YQ
Sbjct: 15 RTLILDGALATELEARGCDLSD--PLWSAKVLIENPELIYQVHLDYFNAGAQCAITASYQ 72
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASI 124
A + G ++Q++L L+ KSVQL A+ D Q P + A S+
Sbjct: 73 ATPLGFLRRGLNQQQSLALIAKSVQLAQQARSDYLAQHPQ----------AAPLLIAGSV 122
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSEY G Y S+ + ++IA+HRP + AL AGVD LA ET+P+ E AL+
Sbjct: 123 GPYGAYLADGSEYRGDY--SLPQEEMIAFHRPRIAALAEAGVDLLACETLPSFSELQALL 180
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
LL+EFP AW +F+ +D H S G ++ V + L NP Q+ AIG+NC+ +V+
Sbjct: 181 ALLQEFPTLGAWFAFTLRDSQHLSDGTPLTQ-VLAALRGNP-QVLAIGINCIALENVTPA 238
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
+ + + +VYPN G
Sbjct: 239 LSQLA-TLTDKPLLVYPNSG 257
>gi|41408377|ref|NP_961213.1| homocysteine methyltransferase [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41396733|gb|AAS04596.1| hypothetical protein MAP_2279 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 306
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/258 (37%), Positives = 131/258 (50%), Gaps = 29/258 (11%)
Query: 9 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
LLDG +++ H + D PLWS+ L P+ V H + RAGA I ++ YQA
Sbjct: 15 LLDGGLATELEARGHDLSD----PLWSARLLADAPQEIVAVHAAYFRAGAMIATTASYQA 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G S + LL +SV+L +A+D+ + GH+ AAS+GP
Sbjct: 71 SFEGFAARGISRSDTAGLLRRSVELAKAARDEAG-------------VAGHV--AASVGP 115
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y S+ + L WHRP +E L A D LA+ETIP EA ALV L
Sbjct: 116 YGAALADGSEYRGRYGISVRQ--LEDWHRPRLEVLAGADADVLAVETIPDVDEAEALVNL 173
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R G AWLS++ D HT G+ ++ A + A +I A+GVNC P V +
Sbjct: 174 VRSL-GVPAWLSYTI-DGAHTRAGQPLADAFA--VAAGVPEIVAVGVNCCAPDDVLPTIE 229
Query: 247 CIKQSHPTVQTIVYPNKG 264
V IVYPN G
Sbjct: 230 IAAAIGKPV--IVYPNSG 245
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 150/318 (47%), Gaps = 30/318 (9%)
Query: 254 TVQTIVYPNKGVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIR 311
+ + +P+ V LLDG +++ H + D PLWS+ L P+ V H + R
Sbjct: 3 SARGFTWPSDPV-LLDGGLATELEARGHDLSD----PLWSARLLADAPQEIVAVHAAYFR 57
Query: 312 GHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPS 371
A T + + G ++ +D R +VE L +A D +
Sbjct: 58 AGAMIA-------TTASYQASFEGFAARGISRSDTAGLLRRSVE-LAKAARD-----EAG 104
Query: 372 ISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
++ AAS+GPYG L DGSEY G Y S+ + L WHRP +E L A D LA+ETIP
Sbjct: 105 VAGHVAASVGPYGAALADGSEYRGRYGISVRQ--LEDWHRPRLEVLAGADADVLAVETIP 162
Query: 432 AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 491
EA ALV L+R G AWLS++ D HT G+ ++ A + A +I A+GVNC
Sbjct: 163 DVDEAEALVNLVRSL-GVPAWLSYTI-DGAHTRAGQPLADAFA--VAAGVPEIVAVGVNC 218
Query: 492 VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGV 551
P V + V IVYPN G W+++ W + L +W+ G
Sbjct: 219 CAPDDVLPTIEIAAAIGKPV--IVYPNSGEHWNALRHNWTGPSRFSAPL--AARWISAGA 274
Query: 552 NIIGGCCEVTSYEIQQMR 569
I+GGCC+V +I +R
Sbjct: 275 RIVGGCCQVRPTDIAAVR 292
>gi|227508077|ref|ZP_03938126.1| homocysteine methyltransferase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227192306|gb|EEI72373.1| homocysteine methyltransferase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 315
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 139/260 (53%), Gaps = 17/260 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ +H + + LWS+ L +P+A H + AGADI + YQANV
Sbjct: 16 VLDGAMATELEKHGVDT--SNDLWSATALINDPDAVKAVHTSYFEAGADITITDTYQANV 73
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQT-PDINLNKT--FNLLTGHIETAASIG 125
+ K+G++E ++ L+ ++V+L ++D T P K + L+ G S+G
Sbjct: 74 EAFKKVGFTEDQSEKLITEAVRLALESRDDFYATLPTAERAKRALYPLVAG------SVG 127
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY+GHY +T +H+ + + AGVD A ET P +E AL
Sbjct: 128 PYGAYLADGSEYTGHY--QLTNEAYQTFHQRRMRLMDEAGVDVFAFETQPNFEETKALAD 185
Query: 186 LLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
LLRE F + AWL+FS KD H G ++ AV S NP QI A+GVNC + +
Sbjct: 186 LLREKFSDRFAWLTFSIKDPEHLCDGTSLAKAV-SYFEDNP-QISAVGVNCTSMNLIEDS 243
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
++ I S+ IVYPN G
Sbjct: 244 IKTI-ASNTNKPIIVYPNNG 262
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 148/311 (47%), Gaps = 15/311 (4%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
+K +LDG+ +++ +H + + LWS+ L +P+A H + E A I
Sbjct: 11 SKRALVLDGAMATELEKHGVDT--SNDLWSATALINDPDAVKAVHT----SYFEAGADIT 64
Query: 322 PYGTVLRDGSEYSG-HYVDSMTEADLIAWHRPNVEAL--VRAGVDYLALIKPSISSQTAA 378
T + + + + +E + R +E+ A + K ++ A
Sbjct: 65 ITDTYQANVEAFKKVGFTEDQSEKLITEAVRLALESRDDFYATLPTAERAKRALYPLVAG 124
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG L DGSEY+GHY +T +H+ + + AGVD A ET P +E A
Sbjct: 125 SVGPYGAYLADGSEYTGHY--QLTNEAYQTFHQRRMRLMDEAGVDVFAFETQPNFEETKA 182
Query: 439 LVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
L LLRE F + AWL+FS KD H G ++ AV S NP QI A+GVNC + +
Sbjct: 183 LADLLREKFSDRFAWLTFSIKDPEHLCDGTSLAKAV-SYFEDNP-QISAVGVNCTSMNLI 240
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
++ I S+ IVYPN G ++D W + + P+WL G I+GGC
Sbjct: 241 EDSIKTI-ASNTNKPIIVYPNNGDIYDPKTKTWTPNPNATTFAELTPKWLAAGAKIVGGC 299
Query: 558 CEVTSYEIQQM 568
C T +I+Q+
Sbjct: 300 CRTTPADIEQV 310
>gi|242041729|ref|XP_002468259.1| hypothetical protein SORBIDRAFT_01g042580 [Sorghum bicolor]
gi|241922113|gb|EER95257.1| hypothetical protein SORBIDRAFT_01g042580 [Sorghum bicolor]
Length = 323
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 133/265 (50%), Gaps = 10/265 (3%)
Query: 1 MSKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQ 60
++K ++DG F +Q+ D++ PLWS+ L T P E H ++ AGADII
Sbjct: 8 VAKAGGCAVIDGGFATQLEALG-ADIN-DPLWSAACLITRPHLVKEVHMQYLEAGADIII 65
Query: 61 SSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIET 120
SS YQA + G S EA DLL SV+L A+D+ ++ +N
Sbjct: 66 SSSYQATIPGFLARGMSVDEAEDLLRTSVKLAVEARDEFWKSALRKAKPIYN----RALV 121
Query: 121 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 180
AAS+G YG L DGSEYSG Y +T L +HR ++ L AG D +A E IP + EA
Sbjct: 122 AASVGSYGAYLADGSEYSGSYGADITAEKLKDFHRRRLQVLASAGPDLIAFEAIPNKMEA 181
Query: 181 LALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 239
ALV+LL E Q +W+ FS D + GE + + +L D++ +GVNC P
Sbjct: 182 QALVELLEEEKVQVPSWICFSSVDGKNLCSGESFADCLK--ILDTSDKVAVVGVNCTPPQ 239
Query: 240 HVSTLVRCIKQSHPTVQTIVYPNKG 264
+ ++ C + VYPN G
Sbjct: 240 FIEGII-CEFKKQTKKAIAVYPNSG 263
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 151/323 (46%), Gaps = 20/323 (6%)
Query: 254 TVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH 313
++ +V G ++DG F +Q+ D++ PLWS+ L T P E H ++
Sbjct: 3 ALEELVAKAGGCAVIDGGFATQLEALG-ADIN-DPLWSAACLITRPHLVKEVHMQYLEAG 60
Query: 314 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY----LALIK 369
+ S T+ G G VD DL+ R +V+ V A ++ L K
Sbjct: 61 ADIIISSSYQATI--PGFLARGMSVDEAE--DLL---RTSVKLAVEARDEFWKSALRKAK 113
Query: 370 PSIS-SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE 428
P + + AAS+G YG L DGSEYSG Y +T L +HR ++ L AG D +A E
Sbjct: 114 PIYNRALVAASVGSYGAYLADGSEYSGSYGADITAEKLKDFHRRRLQVLASAGPDLIAFE 173
Query: 429 TIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
IP + EA ALV+LL E Q +W+ FS D + GE + + +L D++ +
Sbjct: 174 AIPNKMEAQALVELLEEEKVQVPSWICFSSVDGKNLCSGESFADCLK--ILDTSDKVAVV 231
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE--DEYSILHYVPQ 545
GVNC P + ++ C + VYPN G VWD +WL E S +
Sbjct: 232 GVNCTPPQFIEGII-CEFKKQTKKAIAVYPNSGEVWDGRAKRWLPVECLGHKSFDALAKR 290
Query: 546 WLEEGVNIIGGCCEVTSYEIQQM 568
W E G ++IGGCC T I+ +
Sbjct: 291 WQEAGASLIGGCCRTTPSTIRAV 313
>gi|390989385|ref|ZP_10259683.1| homocysteine S-methyltransferase [Xanthomonas axonopodis pv.
punicae str. LMG 859]
gi|372555889|emb|CCF66658.1| homocysteine S-methyltransferase [Xanthomonas axonopodis pv.
punicae str. LMG 859]
Length = 321
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 30/333 (9%)
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE 300
++ L R + + P Q + + G +LDG+ +++ + D LWS+ L +PE
Sbjct: 1 MTILPRQPRANAPFSQALQH--DGYVVLDGALATELEQRGCDLNDA--LWSARVLMEQPE 56
Query: 301 ACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 360
+ HRD+ + A + T L ++ +D LIA +V ++A
Sbjct: 57 LIYQVHRDYFAAGAQCAITASYQATPL----GFAARGLDVAQAQALIA---RSVALAMQA 109
Query: 361 GVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 420
D+L L + A S+GPYG L DGSEY G YV + + L+ +HRP + AL A
Sbjct: 110 RADHLTLHPHAAPLWVAGSVGPYGAYLADGSEYRGDYVLPIEQ--LMDFHRPRIAALAEA 167
Query: 421 GVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 479
GVD LA ET+P+ E +AL +LLR EFP AW SF+ +D H S G ++ V + L
Sbjct: 168 GVDLLACETLPSASEIVALRQLLRHEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LD 225
Query: 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-------LD 532
Q+ A+G+NC+ + + + + + +VYPN G +D+ +W L
Sbjct: 226 ACAQVIAVGINCIALDQATAALHSLS-ALTALPLVVYPNSGEHYDASDKRWHVGRGAALT 284
Query: 533 TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
D+++ WL G +IGGCC +I
Sbjct: 285 LADQHA------HWLAAGARLIGGCCRTAPRDI 311
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 130/257 (50%), Gaps = 17/257 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + D LWS+ L +PE + HRD+ AGA ++ YQA
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G +A L+ +SV L A+ + T + + A S+GPYG
Sbjct: 83 LGFAARGLDVAQAQALIARSVALAMQARAD---------HLTLHPHAAPLWVAGSVGPYG 133
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV + + L+ +HRP + AL AGVD LA ET+P+ E +AL +LLR
Sbjct: 134 AYLADGSEYRGDYVLPIEQ--LMDFHRPRIAALAEAGVDLLACETLPSASEIVALRQLLR 191
Query: 189 -EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP AW SF+ +D H S G ++ V + L Q+ A+G+NC+ + +
Sbjct: 192 HEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LDACAQVIAVGINCIALDQATAALHS 249
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + + +VYPN G
Sbjct: 250 LS-ALTALPLVVYPNSG 265
>gi|433642656|ref|YP_007288415.1| Homocysteine S-methyltransferase MmuM
(S-methylmethionine:homocysteine methyltransferase)
(cysteine methyltransferase) [Mycobacterium canettii
CIPT 140070008]
gi|432159204|emb|CCK56508.1| Homocysteine S-methyltransferase MmuM
(S-methylmethionine:homocysteine methyltransferase)
(cysteine methyltransferase) [Mycobacterium canettii
CIPT 140070008]
Length = 302
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 130/261 (49%), Gaps = 27/261 (10%)
Query: 6 KVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
V + DG +++ H + D PLWS+ L P A H + RAGA I ++
Sbjct: 7 SVLISDGGLATELEARGHDLSD----PLWSARLLVDAPHAITAVHTAYFRAGAQIATTAS 62
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
YQA+ + G +A LL +SV+L +A+D+ G + AAS
Sbjct: 63 YQASFEGFAARGIGHDDATVLLRRSVELARAARDEVG--------------VGGLSVAAS 108
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G Y ++ A L+ WH P +E LV AG D LALETIP EA AL
Sbjct: 109 VGPYGAALADGSEYRGRY--GLSVAALMKWHLPRLEVLVDAGADVLALETIPDIDEAEAL 166
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
V L+R AWLS++ + T T G+ ++ A + A +I A+GVNC P V
Sbjct: 167 VNLVRWL-ATPAWLSYTI-NGTRTRAGQPLTDAF--AVAAGVPEIVAVGVNCCAPDDVLP 222
Query: 244 LVRCIKQSHPTVQTIVYPNKG 264
+ +H IVYPN G
Sbjct: 223 AI-AFAVAHTGKPVIVYPNSG 242
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 142/307 (46%), Gaps = 26/307 (8%)
Query: 265 VKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
V + DG +++ H + D PLWS+ L P A H + R + A
Sbjct: 8 VLISDGGLATELEARGHDLSD----PLWSARLLVDAPHAITAVHTAYFRAGAQIA----- 58
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
T + + G + D R +VE L RA D + + S+ AAS+GP
Sbjct: 59 --TTASYQASFEGFAARGIGHDDATVLLRRSVE-LARAARDEVGVGGLSV----AASVGP 111
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY G Y ++ A L+ WH P +E LV AG D LALETIP EA ALV L
Sbjct: 112 YGAALADGSEYRGRY--GLSVAALMKWHLPRLEVLVDAGADVLALETIPDIDEAEALVNL 169
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
+R AWLS++ + T T G+ ++ A + A +I A+GVNC P V +
Sbjct: 170 VRWL-ATPAWLSYTI-NGTRTRAGQPLTDAF--AVAAGVPEIVAVGVNCCAPDDVLPAI- 224
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVT 561
+H IVYPN G WD W+ S +W+ G I+GGCC V
Sbjct: 225 AFAVAHTGKPVIVYPNSGEGWDGRRRAWVGPRRFSGSPGQLAREWVAAGARIVGGCCRVR 284
Query: 562 SYEIQQM 568
+I ++
Sbjct: 285 PVDIAEI 291
>gi|298525936|ref|ZP_07013345.1| homocysteine methyltransferase [Mycobacterium tuberculosis
94_M4241A]
gi|308377015|ref|ZP_07440877.2| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu008]
gi|298495730|gb|EFI31024.1| homocysteine methyltransferase [Mycobacterium tuberculosis
94_M4241A]
gi|308349196|gb|EFP38047.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu008]
Length = 300
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 130/261 (49%), Gaps = 27/261 (10%)
Query: 6 KVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
V + DG +++ H + D PLWS+ L P A H + RAGA I ++
Sbjct: 5 SVLISDGGLATELEARGHDLSD----PLWSARLLVDAPHAITAVHTAYFRAGAQIATTAS 60
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
YQA+ + G +A LL +SV+L +A+D+ G + AAS
Sbjct: 61 YQASFEGFAARGIGHDDATVLLRRSVELAQAARDEVG--------------VGGLSVAAS 106
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G Y ++ A L+ WH P +E LV AG D LALETIP EA AL
Sbjct: 107 VGPYGAALADGSEYRGCY--GLSVAALMKWHLPRLEVLVDAGADMLALETIPDIDEAEAL 164
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
V L+R AWLS++ + T T G+ ++ A + A +I A+GVNC P V
Sbjct: 165 VNLVRRL-ATPAWLSYTI-NGTRTRAGQPLTDAFA--VAAGVPEIVAVGVNCCAPDDVLP 220
Query: 244 LVRCIKQSHPTVQTIVYPNKG 264
+ +H IVYPN G
Sbjct: 221 AI-AFAVAHTGKPVIVYPNSG 240
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 142/307 (46%), Gaps = 26/307 (8%)
Query: 265 VKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
V + DG +++ H + D PLWS+ L P A H + R + A
Sbjct: 6 VLISDGGLATELEARGHDLSD----PLWSARLLVDAPHAITAVHTAYFRAGAQIA----- 56
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
T + + G + D R +VE L +A D + + S+ AAS+GP
Sbjct: 57 --TTASYQASFEGFAARGIGHDDATVLLRRSVE-LAQAARDEVGVGGLSV----AASVGP 109
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY G Y ++ A L+ WH P +E LV AG D LALETIP EA ALV L
Sbjct: 110 YGAALADGSEYRGCY--GLSVAALMKWHLPRLEVLVDAGADMLALETIPDIDEAEALVNL 167
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
+R AWLS++ + T T G+ ++ A + A +I A+GVNC P V +
Sbjct: 168 VRRL-ATPAWLSYTI-NGTRTRAGQPLTDAFA--VAAGVPEIVAVGVNCCAPDDVLPAI- 222
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVT 561
+H IVYPN G WD W+ S +W+ G I+GGCC V
Sbjct: 223 AFAVAHTGKPVIVYPNSGEGWDGRRRAWVGPRRFSGSSGQLAREWVAAGARIVGGCCRVR 282
Query: 562 SYEIQQM 568
+I ++
Sbjct: 283 PIDIAEI 289
>gi|168002076|ref|XP_001753740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695147|gb|EDQ81492.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 350
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/260 (36%), Positives = 139/260 (53%), Gaps = 14/260 (5%)
Query: 11 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDN 70
DG F +Q+ RH D PLWS+V L T P+ + HR+++ AGA +I ++ YQA +
Sbjct: 35 DGGFATQLERHGANIND--PLWSAVCLITMPDLIRKVHREYLEAGAAVISTASYQATIQG 92
Query: 71 LTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAASIGPY 127
G S +++ DLL SV++ +D KE Q ++ H AASIG Y
Sbjct: 93 FEMRGLSTKDSEDLLQLSVRIAREERDRFWKEYQNK-VHTGPGQAGSYHHALVAASIGSY 151
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEYSG Y +T L +HR + L AG D LA ETIP + E ALV+LL
Sbjct: 152 GAYLADGSEYSGDYGSFVTVEKLKNFHRRRLLVLADAGPDLLAFETIPCKLEIQALVELL 211
Query: 188 REFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
E + AW++ + KD + +G+ ++ V LL N ++ A+G+NC P + L+R
Sbjct: 212 DEEKIRIPAWVALNSKDGVNVVNGDSLTDCVG--LLDNCTKVVAVGINCTPPRFILDLIR 269
Query: 247 CIKQ--SHPTVQTIVYPNKG 264
++ S P +VYPN G
Sbjct: 270 VARKVTSKP---IMVYPNSG 286
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 159/324 (49%), Gaps = 24/324 (7%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G + DG F +Q+ RH D PLWS+V L T P+ + HR+++ ++
Sbjct: 30 GCVVTDGGFATQLERHGANIND--PLWSAVCLITMPDLIRKVHREYLEAGAAVISTASYQ 87
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWH-RPNVEALVRAGVDYLALIKPSIS-------SQ 375
T+ G E G + + DL+ R E R +Y + +
Sbjct: 88 ATI--QGFEMRG--LSTKDSEDLLQLSVRIAREERDRFWKEYQNKVHTGPGQAGSYHHAL 143
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
AASIG YG L DGSEYSG Y +T L +HR + L AG D LA ETIP + E
Sbjct: 144 VAASIGSYGAYLADGSEYSGDYGSFVTVEKLKNFHRRRLLVLADAGPDLLAFETIPCKLE 203
Query: 436 ALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
ALV+LL E + AW++ + KD + +G+ ++ V LL N ++ A+G+NC P
Sbjct: 204 IQALVELLDEEKIRIPAWVALNSKDGVNVVNGDSLTDCVG--LLDNCTKVVAVGINCTPP 261
Query: 495 SHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTED--EYSILHYVPQWLEEG 550
+ L+R ++ S P +VYPN G +D+V +W++ + + + +V +W + G
Sbjct: 262 RFILDLIRVARKVTSKP---IMVYPNSGEHYDAVIKQWVECKGSTDTDFVSHVQEWRKAG 318
Query: 551 VNIIGGCCEVTSYEIQQMRIMIDE 574
+IGGCC T I+ + ++ E
Sbjct: 319 AQLIGGCCRTTPNTIRAISRVLYE 342
>gi|440776437|ref|ZP_20955283.1| homocysteine methyltransferase [Mycobacterium avium subsp.
paratuberculosis S5]
gi|436723604|gb|ELP47412.1| homocysteine methyltransferase [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 335
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/258 (37%), Positives = 131/258 (50%), Gaps = 29/258 (11%)
Query: 9 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
LLDG +++ H + D PLWS+ L P+ V H + RAGA I ++ YQA
Sbjct: 44 LLDGGLATELEARGHDLSD----PLWSARLLADAPQEIVAVHAAYFRAGAMIATTASYQA 99
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G S + LL +SV+L +A+D+ + GH+ AAS+GP
Sbjct: 100 SFEGFAARGISRSDTAGLLRRSVELAKAARDEAG-------------VAGHV--AASVGP 144
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y S+ + L WHRP +E L A D LA+ETIP EA ALV L
Sbjct: 145 YGAALADGSEYRGRYGISVRQ--LEDWHRPRLEVLAGADADVLAVETIPDVDEAEALVNL 202
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R G AWLS++ D HT G+ ++ A + A +I A+GVNC P V +
Sbjct: 203 VRSL-GVPAWLSYTI-DGAHTRAGQPLADAFA--VAAGVPEIVAVGVNCCAPDDVLPTIE 258
Query: 247 CIKQSHPTVQTIVYPNKG 264
V IVYPN G
Sbjct: 259 IAAAIGKPV--IVYPNSG 274
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 144/305 (47%), Gaps = 29/305 (9%)
Query: 267 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
LLDG +++ H + D PLWS+ L P+ V H + R A
Sbjct: 44 LLDGGLATELEARGHDLSD----PLWSARLLADAPQEIVAVHAAYFRAGAMIA------- 92
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
T + + G ++ +D R +VE L +A D + ++ AAS+GPYG
Sbjct: 93 TTASYQASFEGFAARGISRSDTAGLLRRSVE-LAKAARD-----EAGVAGHVAASVGPYG 146
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
L DGSEY G Y S+ + L WHRP +E L A D LA+ETIP EA ALV L+R
Sbjct: 147 AALADGSEYRGRYGISVRQ--LEDWHRPRLEVLAGADADVLAVETIPDVDEAEALVNLVR 204
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 504
G AWLS++ D HT G+ ++ A + A +I A+GVNC P V +
Sbjct: 205 SL-GVPAWLSYTI-DGAHTRAGQPLADAFA--VAAGVPEIVAVGVNCCAPDDVLPTIEIA 260
Query: 505 KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYE 564
V IVYPN G W+++ W + L +W+ G I+GGCC+V +
Sbjct: 261 AAIGKPV--IVYPNSGEHWNALRHNWTGPSRFSAPL--AARWISAGARIVGGCCQVRPTD 316
Query: 565 IQQMR 569
I +R
Sbjct: 317 IAAVR 321
>gi|31793639|ref|NP_856132.1| homocysteine methyltransferase [Mycobacterium bovis AF2122/97]
gi|121638341|ref|YP_978565.1| homocysteine methyltransferase [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148823658|ref|YP_001288412.1| homocysteine methyltransferase [Mycobacterium tuberculosis F11]
gi|224990835|ref|YP_002645522.1| homocysteine methyltransferase [Mycobacterium bovis BCG str. Tokyo
172]
gi|253798463|ref|YP_003031464.1| homocysteine methyltransferase [Mycobacterium tuberculosis KZN
1435]
gi|254551506|ref|ZP_05141953.1| homocysteine methyltransferase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289443984|ref|ZP_06433728.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
T46]
gi|289448101|ref|ZP_06437845.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
CPHL_A]
gi|289570613|ref|ZP_06450840.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
T17]
gi|289575152|ref|ZP_06455379.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
K85]
gi|289746240|ref|ZP_06505618.1| homocysteine methyltransferase [Mycobacterium tuberculosis 02_1987]
gi|289751064|ref|ZP_06510442.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
T92]
gi|289754566|ref|ZP_06513944.1| homocysteine methyltransferase [Mycobacterium tuberculosis EAS054]
gi|289758590|ref|ZP_06517968.1| homocysteine methyltransferase [Mycobacterium tuberculosis T85]
gi|289762627|ref|ZP_06522005.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
GM 1503]
gi|294994434|ref|ZP_06800125.1| homocysteine methyltransferase [Mycobacterium tuberculosis 210]
gi|297635064|ref|ZP_06952844.1| homocysteine methyltransferase [Mycobacterium tuberculosis KZN
4207]
gi|297732055|ref|ZP_06961173.1| homocysteine methyltransferase [Mycobacterium tuberculosis KZN
R506]
gi|306780501|ref|ZP_07418838.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu002]
gi|306785253|ref|ZP_07423575.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu003]
gi|306789612|ref|ZP_07427934.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu004]
gi|306793939|ref|ZP_07432241.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu005]
gi|306798333|ref|ZP_07436635.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu006]
gi|306808779|ref|ZP_07445447.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu007]
gi|306968611|ref|ZP_07481272.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu009]
gi|313659391|ref|ZP_07816271.1| homocysteine methyltransferase [Mycobacterium tuberculosis KZN
V2475]
gi|339632486|ref|YP_004724128.1| homocysteine S-methyltransferase [Mycobacterium africanum GM041182]
gi|340627472|ref|YP_004745924.1| putative homocysteine S-methyltransferase [Mycobacterium canettii
CIPT 140010059]
gi|375295726|ref|YP_005099993.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
KZN 4207]
gi|378772193|ref|YP_005171926.1| homocysteine S-methyltransferase [Mycobacterium bovis BCG str.
Mexico]
gi|383308237|ref|YP_005361048.1| homocysteine methyltransferase [Mycobacterium tuberculosis RGTB327]
gi|385991773|ref|YP_005910071.1| homocysteine methyltransferase [Mycobacterium tuberculosis
CCDC5180]
gi|385995393|ref|YP_005913691.1| homocysteine methyltransferase [Mycobacterium tuberculosis
CCDC5079]
gi|385999240|ref|YP_005917539.1| homocysteine methyltransferase [Mycobacterium tuberculosis CTRI-2]
gi|386005363|ref|YP_005923642.1| homocysteine methyltransferase [Mycobacterium tuberculosis RGTB423]
gi|392387099|ref|YP_005308728.1| mmuM [Mycobacterium tuberculosis UT205]
gi|392431933|ref|YP_006472977.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
KZN 605]
gi|424804796|ref|ZP_18230227.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
W-148]
gi|424948129|ref|ZP_18363825.1| homocysteine methyltransferase [Mycobacterium tuberculosis
NCGM2209]
gi|433627591|ref|YP_007261220.1| Homocysteine S-methyltransferase MmuM
(S-methylmethionine:homocysteine methyltransferase)
(cysteine methyltransferase) [Mycobacterium canettii
CIPT 140060008]
gi|449064528|ref|YP_007431611.1| homocysteine methyltransferase [Mycobacterium bovis BCG str. Korea
1168P]
gi|31619232|emb|CAD97346.1| PROBABLE HOMOCYSTEINE S-METHYLTRANSFERASE MMUM
(S-METHYLMETHIONINE:HOMOCYSTEINE METHYLTRANSFERASE)
(CYSTEINE METHYLTRANSFERASE) [Mycobacterium bovis
AF2122/97]
gi|121493989|emb|CAL72466.1| Probable homocysteine S-methyltransferase mmuM [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|148722185|gb|ABR06810.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
F11]
gi|224773948|dbj|BAH26754.1| homocysteine methyltransferase [Mycobacterium bovis BCG str. Tokyo
172]
gi|253319966|gb|ACT24569.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
KZN 1435]
gi|289416903|gb|EFD14143.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
T46]
gi|289421059|gb|EFD18260.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
CPHL_A]
gi|289539583|gb|EFD44161.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
K85]
gi|289544367|gb|EFD48015.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
T17]
gi|289686768|gb|EFD54256.1| homocysteine methyltransferase [Mycobacterium tuberculosis 02_1987]
gi|289691651|gb|EFD59080.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
T92]
gi|289695153|gb|EFD62582.1| homocysteine methyltransferase [Mycobacterium tuberculosis EAS054]
gi|289710133|gb|EFD74149.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
GM 1503]
gi|289714154|gb|EFD78166.1| homocysteine methyltransferase [Mycobacterium tuberculosis T85]
gi|308326649|gb|EFP15500.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu002]
gi|308330075|gb|EFP18926.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu003]
gi|308333915|gb|EFP22766.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu004]
gi|308337718|gb|EFP26569.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu005]
gi|308341399|gb|EFP30250.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu006]
gi|308344885|gb|EFP33736.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu007]
gi|308353817|gb|EFP42668.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu009]
gi|326904072|gb|EGE51005.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
W-148]
gi|328458231|gb|AEB03654.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
KZN 4207]
gi|339295347|gb|AEJ47458.1| homocysteine methyltransferase [Mycobacterium tuberculosis
CCDC5079]
gi|339298966|gb|AEJ51076.1| homocysteine methyltransferase [Mycobacterium tuberculosis
CCDC5180]
gi|339331842|emb|CCC27545.1| putative homocysteine S-methyltransferase MMUM
(S-methylmethionine:homocysteine methyltransferase)
[Mycobacterium africanum GM041182]
gi|340005662|emb|CCC44828.1| putative homocysteine S-methyltransferase MMUM
(S-methylmethionine:homocysteine methyltransferase)
(cysteine methyltransferase) [Mycobacterium canettii
CIPT 140010059]
gi|341602379|emb|CCC65055.1| probable homocysteine S-methyltransferase mmuM [Mycobacterium bovis
BCG str. Moreau RDJ]
gi|344220287|gb|AEN00918.1| homocysteine methyltransferase [Mycobacterium tuberculosis CTRI-2]
gi|356594514|gb|AET19743.1| Homocysteine S-methyltransferase [Mycobacterium bovis BCG str.
Mexico]
gi|358232644|dbj|GAA46136.1| homocysteine methyltransferase [Mycobacterium tuberculosis
NCGM2209]
gi|378545650|emb|CCE37928.1| mmuM [Mycobacterium tuberculosis UT205]
gi|380722190|gb|AFE17299.1| homocysteine methyltransferase [Mycobacterium tuberculosis RGTB327]
gi|380725851|gb|AFE13646.1| homocysteine methyltransferase [Mycobacterium tuberculosis RGTB423]
gi|392053342|gb|AFM48900.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
KZN 605]
gi|432155197|emb|CCK52443.1| Homocysteine S-methyltransferase MmuM
(S-methylmethionine:homocysteine methyltransferase)
(cysteine methyltransferase) [Mycobacterium canettii
CIPT 140060008]
gi|449033036|gb|AGE68463.1| homocysteine methyltransferase [Mycobacterium bovis BCG str. Korea
1168P]
Length = 302
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 130/261 (49%), Gaps = 27/261 (10%)
Query: 6 KVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
V + DG +++ H + D PLWS+ L P A H + RAGA I ++
Sbjct: 7 SVLISDGGLATELEARGHDLSD----PLWSARLLVDAPHAITAVHTAYFRAGAQIATTAS 62
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
YQA+ + G +A LL +SV+L +A+D+ G + AAS
Sbjct: 63 YQASFEGFAARGIGHDDATVLLRRSVELAQAARDEVG--------------VGGLSVAAS 108
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G Y ++ A L+ WH P +E LV AG D LALETIP EA AL
Sbjct: 109 VGPYGAALADGSEYRGCY--GLSVAALMKWHLPRLEVLVDAGADMLALETIPDIDEAEAL 166
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
V L+R AWLS++ + T T G+ ++ A + A +I A+GVNC P V
Sbjct: 167 VNLVRRL-ATPAWLSYTI-NGTRTRAGQPLTDAF--AVAAGVPEIVAVGVNCCAPDDVLP 222
Query: 244 LVRCIKQSHPTVQTIVYPNKG 264
+ +H IVYPN G
Sbjct: 223 AI-AFAVAHTGKPVIVYPNSG 242
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 142/307 (46%), Gaps = 26/307 (8%)
Query: 265 VKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
V + DG +++ H + D PLWS+ L P A H + R + A
Sbjct: 8 VLISDGGLATELEARGHDLSD----PLWSARLLVDAPHAITAVHTAYFRAGAQIA----- 58
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
T + + G + D R +VE L +A D + + S+ AAS+GP
Sbjct: 59 --TTASYQASFEGFAARGIGHDDATVLLRRSVE-LAQAARDEVGVGGLSV----AASVGP 111
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY G Y ++ A L+ WH P +E LV AG D LALETIP EA ALV L
Sbjct: 112 YGAALADGSEYRGCY--GLSVAALMKWHLPRLEVLVDAGADMLALETIPDIDEAEALVNL 169
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
+R AWLS++ + T T G+ ++ A + A +I A+GVNC P V +
Sbjct: 170 VRRL-ATPAWLSYTI-NGTRTRAGQPLTDAF--AVAAGVPEIVAVGVNCCAPDDVLPAI- 224
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVT 561
+H IVYPN G WD W+ S +W+ G I+GGCC V
Sbjct: 225 AFAVAHTGKPVIVYPNSGEGWDGRRRAWVGPRRFSGSSGQLAREWVAAGARIVGGCCRVR 284
Query: 562 SYEIQQM 568
+I ++
Sbjct: 285 PIDIAEI 291
>gi|452090884|gb|AGF95112.1| homocysteine S-methyltransferase, partial [Prunus persica]
Length = 368
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/275 (35%), Positives = 141/275 (51%), Gaps = 35/275 (12%)
Query: 1 MSKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQ 60
+ K +LDG F +++ RH D PLWS+ L + P H D++ AGA++I
Sbjct: 51 LEKCGGYAVLDGGFATELERHGADLND--PLWSAKCLISSPHLVRRVHLDYLDAGANVII 108
Query: 61 SSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH--I 118
++ YQA + G+S++EA L+ KSV++ A++ F+ L +
Sbjct: 109 TASYQATIQGFEAKGFSKEEAKALIRKSVEIAIEAREI-----------YFDKLQSRRPV 157
Query: 119 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 178
AAS+G YG L DGSEYSG+Y D++T L +HR V+ L +G D +A ET P +
Sbjct: 158 LVAASVGSYGAYLADGSEYSGNYGDAVTVETLKDFHRERVQILANSGADLIAFETTPNKI 217
Query: 179 EALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELIS---SAVTSCLLANPDQIQAI 231
EA A +LL E P AW SF+ KD + G+ IS S SC Q+ A+
Sbjct: 218 EAKAYAELLEEEGIDIP---AWFSFTSKDGINVVSGDSISECTSIADSC-----KQVVAV 269
Query: 232 GVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKG 264
G+NC P + LV I++ S P V +YPN G
Sbjct: 270 GINCTPPRFIHGLVSLIRKVTSKPIV---IYPNSG 301
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 161/332 (48%), Gaps = 35/332 (10%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G +LDG F +++ RH D PLWS+ L + P H D++ +
Sbjct: 56 GYAVLDGGFATELERHGADLND--PLWSAKCLISSPHLVRRVHLDYLDAGANVIITASYQ 113
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPY 383
T+ G ++ + A R +VE + A Y ++ AAS+G Y
Sbjct: 114 ATI-------QGFEAKGFSKEEAKALIRKSVEIAIEAREIYFDKLQSRRPVLVAASVGSY 166
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L DGSEYSG+Y D++T L +HR V+ L +G D +A ET P + EA A +LL
Sbjct: 167 GAYLADGSEYSGNYGDAVTVETLKDFHRERVQILANSGADLIAFETTPNKIEAKAYAELL 226
Query: 444 RE----FPGQKAWLSFSCKDDTHTSHGELIS---SAVTSCLLANPDQIQAIGVNCVRPSH 496
E P AW SF+ KD + G+ IS S SC Q+ A+G+NC P
Sbjct: 227 EEEGIDIP---AWFSFTSKDGINVVSGDSISECTSIADSC-----KQVVAVGINCTPPRF 278
Query: 497 VSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWL----DTEDEYSILHYVPQWLEEG 550
+ LV I++ S P V +YPN G +D + +W+ + ++E++ + + +W E G
Sbjct: 279 IHGLVSLIRKVTSKPIV---IYPNSGETYDGLTKQWVQSSGEVDEEFADI-VIGKWHEAG 334
Query: 551 VNIIGGCCEVTSYEIQQM-RIMIDEFNTKKND 581
++ GGCC T I+ + R++ ++ ++ N+
Sbjct: 335 ASLFGGCCRTTPNTIRAISRVLSNQKSSAINE 366
>gi|452114164|gb|AGG09240.1| selenocysteine methyltransferase [Camellia sinensis]
Length = 351
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 139/266 (52%), Gaps = 16/266 (6%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V ++DG +++ RH D PLWS+ L T P H D++ AGADII ++ YQA
Sbjct: 30 VAIIDGGLATELERHGADLND--PLWSAKCLLTSPHLIRRVHLDYLEAGADIIITASYQA 87
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD--KENQTPDINLNKTFNLLTGH--IETAA 122
+ G+S++E+ +L + V++ A+D EN N + L H I AA
Sbjct: 88 TIQGFEAKGFSQEESEAMLKRCVEIAREARDIYYENCRELSNDSADDGRLLKHRSILVAA 147
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
S+G YG L DGSEYSG Y ++M L +HR V+ L AG D +A ET+P + EA A
Sbjct: 148 SVGSYGAYLADGSEYSGDYGNAMDLEFLKDFHRRRVQILADAGADLIAFETVPNKLEAQA 207
Query: 183 LVKLLREFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVNCVRP 238
+LL E + AW SF+ KD H G+ + ++ +C ++ A+G+NC P
Sbjct: 208 YARLLEEEDIKIPAWFSFNSKDGVHVVSGDSLLECAAIAEAC-----KKVVAVGINCTPP 262
Query: 239 SHVSTLVRCIKQSHPTVQTIVYPNKG 264
+ L+ +K+ T ++YPN G
Sbjct: 263 RFIHDLILTVKKG-TTKPILIYPNSG 287
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 151/323 (46%), Gaps = 34/323 (10%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V ++DG +++ RH D PLWS+ L T P H D++ + +
Sbjct: 30 VAIIDGGLATELERHGADLND--PLWSAKCLLTSPHLIRRVHLDYLEAGADIIITASYQA 87
Query: 325 TVLRDGSEYSG-----------HYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSIS 373
T+ G E G V+ EA I + N L D L+K S
Sbjct: 88 TI--QGFEAKGFSQEESEAMLKRCVEIAREARDIYYE--NCRELSNDSADDGRLLKHR-S 142
Query: 374 SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
AAS+G YG L DGSEYSG Y ++M L +HR V+ L AG D +A ET+P +
Sbjct: 143 ILVAASVGSYGAYLADGSEYSGDYGNAMDLEFLKDFHRRRVQILADAGADLIAFETVPNK 202
Query: 434 KEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGV 489
EA A +LL E + AW SF+ KD H G+ + ++ +C ++ A+G+
Sbjct: 203 LEAQAYARLLEEEDIKIPAWFSFNSKDGVHVVSGDSLLECAAIAEAC-----KKVVAVGI 257
Query: 490 NCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLD----TEDEYSILHYVPQ 545
NC P + L+ +K+ T ++YPN G +D+ +W+ ++D++ + V
Sbjct: 258 NCTPPRFIHDLILTVKKG-TTKPILIYPNSGESYDADKKEWVQNTGVSDDDF--VSCVNT 314
Query: 546 WLEEGVNIIGGCCEVTSYEIQQM 568
W + G +++GGCC T I+ +
Sbjct: 315 WCDVGASLVGGCCRTTPNTIRAI 337
>gi|21112401|gb|AAM40642.1| homocysteine S-methyltransferase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66574532|gb|AAY49942.1| homocysteine S-methyltransferase [Xanthomonas campestris pv.
campestris str. 8004]
Length = 347
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 148/303 (48%), Gaps = 15/303 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ + D LWS+ L +PE + HRD+ + A + T
Sbjct: 52 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 109
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
G + A A +V +A D+LA + A S+GPYG
Sbjct: 110 -------QGFAARGLGLAQSQALIARSVALAAQARADHLAAHPQAAPLWVAGSVGPYGAY 162
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y ++ A ++ +HRP + ALV AGVD LA ET+P+ E AL LL EF
Sbjct: 163 LADGSEYRGDY--ALPVAQMLDFHRPRIAALVDAGVDLLACETLPSASEITALRLLLEEF 220
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P AW SF+ +D H S G ++ + + L A P Q+ A+G+NC+ V+ ++ +
Sbjct: 221 PQVHAWFSFTLRDAAHLSDGTPLAQVIPA-LDACP-QVVAVGINCIAIEQVTAALQSLA- 277
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
+ ++ +VYPN G +D+ +W T S+ QW G +IGGCC T +I
Sbjct: 278 ALTSLPLVVYPNSGEHYDASDKRWHAGTTVACSLATQRAQWHAAGARLIGGCCRTTPADI 337
Query: 566 QQM 568
+
Sbjct: 338 AAL 340
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 132/257 (51%), Gaps = 18/257 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + D LWS+ L +PE + HRD+ AGA ++ YQA
Sbjct: 52 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 109
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASIGPY 127
G ++ L+ +SV L A+ D P + A S+GPY
Sbjct: 110 QGFAARGLGLAQSQALIARSVALAAQARADHLAAHPQ----------AAPLWVAGSVGPY 159
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y ++ A ++ +HRP + ALV AGVD LA ET+P+ E AL LL
Sbjct: 160 GAYLADGSEYRGDY--ALPVAQMLDFHRPRIAALVDAGVDLLACETLPSASEITALRLLL 217
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP AW SF+ +D H S G ++ + + L A P Q+ A+G+NC+ V+ ++
Sbjct: 218 EEFPQVHAWFSFTLRDAAHLSDGTPLAQVIPA-LDACP-QVVAVGINCIAIEQVTAALQS 275
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + ++ +VYPN G
Sbjct: 276 LA-ALTSLPLVVYPNSG 291
>gi|417787777|ref|ZP_12435460.1| homocysteine S-methyltransferase [Lactobacillus salivarius NIAS840]
gi|334307954|gb|EGL98940.1| homocysteine S-methyltransferase [Lactobacillus salivarius NIAS840]
Length = 307
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 142/256 (55%), Gaps = 21/256 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ ++ + R + + LW++ L E E H+ + AGAD+I + YQAN+
Sbjct: 13 VLDGAMSTPLER--LGADTNNDLWTAKALIDNEELVYEVHKMYFEAGADLIITDTYQANI 70
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK-ENQTPDINLNKTFNLLTGHIETAASIGPY 127
K+GYSE+EA +L+ K+V++ A+D EN+T H A +IGPY
Sbjct: 71 QAFEKVGYSEKEARNLIKKAVKIAQKARDDYENRT------------GKHNYIAGTIGPY 118
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L +GSEY G Y ++ + +H P +E LV GVD LA+ET P E LA+++LL
Sbjct: 119 GAYLANGSEYRGDY--ELSTKEYQQFHLPRIEELVTTGVDILAIETQPKLDEVLAILELL 176
Query: 188 -REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+++P QK ++S++ DD S G + A+ + L + Q+ A+G+NCV+ V ++
Sbjct: 177 KKKYPQQKVYVSYTLSDDDTISDGTSLPRAIHA--LEDYSQVIAVGINCVKLELVEPALK 234
Query: 247 CIKQSHPTVQTIVYPN 262
+K+ IVYPN
Sbjct: 235 NMKEITDK-HLIVYPN 249
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 147/313 (46%), Gaps = 29/313 (9%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ ++ + R + + LW++ L E E H+ + E A + +
Sbjct: 13 VLDGAMSTPLER--LGADTNNDLWTAKALIDNEELVYEVHKMYF----EAGADL-----I 61
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT------AASI 380
+ D Y ++ + + + L++ V + ++T A +I
Sbjct: 62 ITDT------YQANIQAFEKVGYSEKEARNLIKKAVKIAQKARDDYENRTGKHNYIAGTI 115
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GPYG L +GSEY G Y ++ + +H P +E LV GVD LA+ET P E LA++
Sbjct: 116 GPYGAYLANGSEYRGDY--ELSTKEYQQFHLPRIEELVTTGVDILAIETQPKLDEVLAIL 173
Query: 441 KLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
+LL++ +P QK ++S++ DD S G + A+ + L + Q+ A+G+NCV+ V
Sbjct: 174 ELLKKKYPQQKVYVSYTLSDDDTISDGTSLPRAIHA--LEDYSQVIAVGINCVKLELVEP 231
Query: 500 LVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
++ +K+ IVYPN V+D W + + +P W E G IIGGCC
Sbjct: 232 ALKNMKEITDK-HLIVYPNSSAVYDPKSKTWSQPKTSATFEELIPNWYEAGARIIGGCCT 290
Query: 560 VTSYEIQQMRIMI 572
EI+ + I
Sbjct: 291 TGPKEIKAVADFI 303
>gi|418521695|ref|ZP_13087737.1| homocysteine methyltransferase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410702230|gb|EKQ60739.1| homocysteine methyltransferase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
Length = 321
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 30/333 (9%)
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE 300
++ L R + + P Q + + G +LDG+ +++ + D LWS+ L +PE
Sbjct: 1 MTILPRQPRANAPFSQALQH--DGYVVLDGALATELEQRGCDLNDA--LWSAHVLMEQPE 56
Query: 301 ACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 360
+ HRD+ + A + T L ++ +D LIA +V ++A
Sbjct: 57 LIYQVHRDYFAAGAQCAITASYQATPL----GFAARGLDVAQAQALIA---RSVALAMQA 109
Query: 361 GVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 420
D+L L + A S+GPYG L DGSEY G YV + + L+ +HRP + AL A
Sbjct: 110 RADHLTLHPHAAPLWVAGSVGPYGAYLADGSEYRGDYVLPIEQ--LMDFHRPRIAALAEA 167
Query: 421 GVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 479
GVD LA ET+P+ E +AL +LLR EFP AW SF+ +D H S G ++ V + L
Sbjct: 168 GVDLLACETLPSASEIVALRQLLRHEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LD 225
Query: 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-------LD 532
Q+ A+G+NC+ + + + + + +VYPN G +D+ +W L
Sbjct: 226 ACAQVIAVGINCIALDQATAALHSLS-ALTALPLVVYPNSGEHYDASDKRWHAGRGAALT 284
Query: 533 TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
D+++ WL G +IGGCC +I
Sbjct: 285 LADQHA------HWLAAGARLIGGCCRTAPRDI 311
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 130/257 (50%), Gaps = 17/257 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + D LWS+ L +PE + HRD+ AGA ++ YQA
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSAHVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G +A L+ +SV L A+ + T + + A S+GPYG
Sbjct: 83 LGFAARGLDVAQAQALIARSVALAMQARAD---------HLTLHPHAAPLWVAGSVGPYG 133
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV + + L+ +HRP + AL AGVD LA ET+P+ E +AL +LLR
Sbjct: 134 AYLADGSEYRGDYVLPIEQ--LMDFHRPRIAALAEAGVDLLACETLPSASEIVALRQLLR 191
Query: 189 -EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP AW SF+ +D H S G ++ V + L Q+ A+G+NC+ + +
Sbjct: 192 HEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LDACAQVIAVGINCIALDQATAALHS 249
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + + +VYPN G
Sbjct: 250 LS-ALTALPLVVYPNSG 265
>gi|301299888|ref|ZP_07206121.1| putative Homocysteine S-methyltransferase [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300852493|gb|EFK80144.1| putative Homocysteine S-methyltransferase [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 307
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 142/256 (55%), Gaps = 21/256 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ ++ + + + + LW++ L E E H+ + AGAD+I + YQANV
Sbjct: 13 VLDGAMSTPLEK--LGADTNNDLWTAKALIDNEELVYEVHKMYFEAGADLIITDTYQANV 70
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK-ENQTPDINLNKTFNLLTGHIETAASIGPY 127
K+GYSE+EA +L+ K+V++ A+D EN+T H A +IGPY
Sbjct: 71 QAFEKVGYSEKEARNLIKKAVKIAQKARDDYENRT------------GKHNYIAGTIGPY 118
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L +GSEY G Y S+ E +H P +E LV A VD LA+ET P E LA+++LL
Sbjct: 119 GAYLANGSEYRGDYELSVEEYQ--QFHLPRIEELVNAEVDILAIETQPKLDEVLAILELL 176
Query: 188 RE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+E +P QK ++S++ DD S G + A+ + L + Q+ A+G+NCV+ V ++
Sbjct: 177 KEKYPQQKVYVSYTLSDDDTISDGTPLPRAIHA--LEDYSQVIAVGINCVKLELVEPALK 234
Query: 247 CIKQSHPTVQTIVYPN 262
+K+ IVYPN
Sbjct: 235 NMKEITDK-HLIVYPN 249
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 106/197 (53%), Gaps = 6/197 (3%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A +IGPYG L +GSEY G Y S+ E +H P +E LV A VD LA+ET P E
Sbjct: 112 AGTIGPYGAYLANGSEYRGDYELSVEEYQ--QFHLPRIEELVNAEVDILAIETQPKLDEV 169
Query: 437 LALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
LA+++LL+E +P QK ++S++ DD S G + A+ + L + Q+ A+G+NCV+
Sbjct: 170 LAILELLKEKYPQQKVYVSYTLSDDDTISDGTPLPRAIHA--LEDYSQVIAVGINCVKLE 227
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
V ++ +K+ IVYPN V+D W + + +P W E G IIG
Sbjct: 228 LVEPALKNMKEITDK-HLIVYPNSSAVYDPKSKTWSQPKTSATFEELIPNWYEAGARIIG 286
Query: 556 GCCEVTSYEIQQMRIMI 572
GCC EI+ + I
Sbjct: 287 GCCTTGPKEIKAVADFI 303
>gi|418050792|ref|ZP_12688878.1| Homocysteine S-methyltransferase [Mycobacterium rhodesiae JS60]
gi|353188416|gb|EHB53937.1| Homocysteine S-methyltransferase [Mycobacterium rhodesiae JS60]
Length = 304
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/260 (37%), Positives = 134/260 (51%), Gaps = 28/260 (10%)
Query: 7 VKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
V + DG +++ H + D LWS+ L P+ V H F RAGADI ++ Y
Sbjct: 10 VLIADGGLATELEARGHDLSD----DLWSARLLVDSPDEIVAVHEAFYRAGADIATTASY 65
Query: 65 QANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
QA+ D + G++ +EA LL +SV+L +A+D N+ G AAS+
Sbjct: 66 QASFDGFAERGFARREAEQLLVRSVELARTARD--------------NVDAGGW-VAASV 110
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L +G EY G Y ++ A L WHRP +E LV A D LALET+P EA AL
Sbjct: 111 GPYGAALANGEEYQGRY--GLSVAQLADWHRPRLEVLVSAQPDVLALETVPDIDEAEALA 168
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
L+REF G AWLS++ HT G+ + A + A+ I A+GVNC P+ V
Sbjct: 169 GLVREF-GLPAWLSYTIAGG-HTRAGQPLEQAF--AVAADVPAIVAVGVNCSAPADVLGA 224
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
+ ++ IVYPN G
Sbjct: 225 IAVARRVSGK-PVIVYPNSG 243
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 141/313 (45%), Gaps = 32/313 (10%)
Query: 261 PNKGVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
P+ V + DG +++ H + D LWS+ L P+ V H F R + A
Sbjct: 6 PHNTVLIADGGLATELEARGHDLSD----DLWSARLLVDSPDEIVAVHEAFYRAGADIAT 61
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--T 376
+ + Y + D E + R E L+ V+ + ++ +
Sbjct: 62 T-----------ASYQASF-DGFAER---GFARREAEQLLVRSVELARTARDNVDAGGWV 106
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
AAS+GPYG L +G EY G Y ++ A L WHRP +E LV A D LALET+P EA
Sbjct: 107 AASVGPYGAALANGEEYQGRY--GLSVAQLADWHRPRLEVLVSAQPDVLALETVPDIDEA 164
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
AL L+REF G AWLS++ HT G+ + A + A+ I A+GVNC P+
Sbjct: 165 EALAGLVREF-GLPAWLSYTIAGG-HTRAGQPLEQAF--AVAADVPAIVAVGVNCSAPAD 220
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556
V + ++ IVYPN G W+ W T + G NIIGG
Sbjct: 221 VLGAIAVARRVSGK-PVIVYPNSGEQWNGPRRTWTGTGAFDANAATQWA--AAGANIIGG 277
Query: 557 CCEVTSYEIQQMR 569
CC V+ +I +R
Sbjct: 278 CCRVSPADIAAIR 290
>gi|429121452|ref|ZP_19182077.1| Homocysteine S-methyltransferase [Cronobacter sakazakii 680]
gi|426324037|emb|CCK12814.1| Homocysteine S-methyltransferase [Cronobacter sakazakii 680]
Length = 310
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 149/304 (49%), Gaps = 15/304 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D LWS+ L +PE H D+ R + A + T
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+G + EA A +VE +A DY + A S+GPYG
Sbjct: 76 -------AGFAARGLDEAQSRALIARSVELARQARDDYYDEQPDAGPLLVAGSVGPYGAY 128
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y +++ A+ +HRP VEAL+ AGVD LA ET+P+ EALAL LL +
Sbjct: 129 LADGSEYRGDY--ALSAAEFADFHRPRVEALLEAGVDLLACETLPSLPEALALAALLESY 186
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P +AW +F+ +D H S G + + LA QI A+G+NCV + + + +
Sbjct: 187 PQARAWFTFTLRDSDHISDGTPLGDVAAA--LAPYPQIVALGINCVALEKTTAALARLHE 244
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
+ + +VYPN G +D+V W D ++ HY+ +W G +IGGCC T +I
Sbjct: 245 AT-RLPLVVYPNSGEQYDAVSKTWRHDGHACQTLAHYLEEWRAAGAALIGGCCRTTPADI 303
Query: 566 QQMR 569
+R
Sbjct: 304 AALR 307
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 142/280 (50%), Gaps = 26/280 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L +PE H D+ RAGA ++ YQA
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKE-NQTPDINLNKTFNLLTGHIETAASIGPY 127
G E ++ L+ +SV+L A+D ++ PD G + A S+GPY
Sbjct: 76 AGFAARGLDEAQSRALIARSVELARQARDDYYDEQPD----------AGPLLVAGSVGPY 125
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y +++ A+ +HRP VEAL+ AGVD LA ET+P+ EALAL LL
Sbjct: 126 GAYLADGSEYRGDY--ALSAAEFADFHRPRVEALLEAGVDLLACETLPSLPEALALAALL 183
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
+P +AW +F+ +D H S G + + LA QI A+G+NCV + +
Sbjct: 184 ESYPQARAWFTFTLRDSDHISDGTPLGDVAAA--LAPYPQIVALGINCVALEKTTAALAR 241
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGH 287
+ ++ + +VYPN G + S+ RH DGH
Sbjct: 242 LHEAT-RLPLVVYPNSGEQY---DAVSKTWRH-----DGH 272
>gi|308187844|ref|YP_003931975.1| homocysteine S-methyltransferase [Pantoea vagans C9-1]
gi|308058354|gb|ADO10526.1| homocysteine S-methyltransferase [Pantoea vagans C9-1]
Length = 311
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 153/305 (50%), Gaps = 26/305 (8%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFI----RGHIETAASIGP 322
+LDG+ +++ D LWS+ L PE + H D+ R I + P
Sbjct: 17 ILDGALATELEARGCHLADA--LWSAKVLMENPELIYQVHYDYFVAGARCAITASYQATP 74
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
G R + EA +A +VE RA DYLA+ + + A S+GP
Sbjct: 75 QGFATR-----------GLDEAQSLALIAQSVELARRARHDYLAVRPDAKTLLVAGSVGP 123
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY G Y ++ EA+++A+HRP V+AL+ AG D LA ET+P+ EA ALVKL
Sbjct: 124 YGAFLADGSEYRGDY--ALPEAEMMAFHRPRVQALLAAGADLLACETLPSFAEAQALVKL 181
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
L EFP +AW +F+ D H S G +S V+ L Q+ AIG+NCV V+ +
Sbjct: 182 LAEFPESRAWFTFTLHDAGHISDGTPLSEVVS--WLNQQPQVVAIGINCVALESVTPALH 239
Query: 503 CIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEV 560
+++ P V VYPN G +D+ W ++ + +W + G +IGGCC
Sbjct: 240 QLQRLTDKPLV---VYPNSGEQYDADSKTWHSAPSGCTLHDKLDEWQQAGAKLIGGCCRT 296
Query: 561 TSYEI 565
+ +I
Sbjct: 297 SPNDI 301
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 137/259 (52%), Gaps = 22/259 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE + H D+ AGA ++ YQA
Sbjct: 17 ILDGALATELEARGCHLADA--LWSAKVLMENPELIYQVHYDYFVAGARCAITASYQATP 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASIGPY 127
G E ++L L+ +SV+L A+ D PD LL A S+GPY
Sbjct: 75 QGFATRGLDEAQSLALIAQSVELARRARHDYLAVRPDAK-----TLLV-----AGSVGPY 124
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y ++ EA+++A+HRP V+AL+ AG D LA ET+P+ EA ALVKLL
Sbjct: 125 GAFLADGSEYRGDY--ALPEAEMMAFHRPRVQALLAAGADLLACETLPSFAEAQALVKLL 182
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP +AW +F+ D H S G +S V+ L Q+ AIG+NCV V+ +
Sbjct: 183 AEFPESRAWFTFTLHDAGHISDGTPLSEVVS--WLNQQPQVVAIGINCVALESVTPALHQ 240
Query: 248 IKQ--SHPTVQTIVYPNKG 264
+++ P V VYPN G
Sbjct: 241 LQRLTDKPLV---VYPNSG 256
>gi|424798331|ref|ZP_18223873.1| Homocysteine S-methyltransferase [Cronobacter sakazakii 696]
gi|423234052|emb|CCK05743.1| Homocysteine S-methyltransferase [Cronobacter sakazakii 696]
Length = 310
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 149/304 (49%), Gaps = 15/304 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D LWS+ L +PE H D+ R + A + T
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+G + EA A +VE +A DY + A S+GPYG
Sbjct: 76 -------AGFAARGLDEAQSRALIARSVELARQARDDYYHEQPDAGPLLVAGSVGPYGAY 128
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y +++ A+ +HRP VEAL+ AGVD LA ET+P+ EALAL LL +
Sbjct: 129 LADGSEYRGDY--ALSAAEFADFHRPRVEALLEAGVDLLACETLPSLPEALALAALLESY 186
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P +AW +F+ +D H S G + + LA QI A+G+NCV + + + +
Sbjct: 187 PQARAWFTFTLRDSDHISDGTPLGDVAAA--LAPYPQIVALGINCVALEKTTAALARLHE 244
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
+ + +VYPN G +D+V W D ++ HY+ +W G +IGGCC T +I
Sbjct: 245 AT-RLPLVVYPNSGEQYDAVSKTWRHDGHACQTLAHYLEEWRAAGAALIGGCCRTTPADI 303
Query: 566 QQMR 569
+R
Sbjct: 304 AALR 307
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 142/280 (50%), Gaps = 26/280 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L +PE H D+ RAGA ++ YQA
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKE-NQTPDINLNKTFNLLTGHIETAASIGPY 127
G E ++ L+ +SV+L A+D ++ PD G + A S+GPY
Sbjct: 76 AGFAARGLDEAQSRALIARSVELARQARDDYYHEQPD----------AGPLLVAGSVGPY 125
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y +++ A+ +HRP VEAL+ AGVD LA ET+P+ EALAL LL
Sbjct: 126 GAYLADGSEYRGDY--ALSAAEFADFHRPRVEALLEAGVDLLACETLPSLPEALALAALL 183
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
+P +AW +F+ +D H S G + + LA QI A+G+NCV + +
Sbjct: 184 ESYPQARAWFTFTLRDSDHISDGTPLGDVAAA--LAPYPQIVALGINCVALEKTTAALAR 241
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGH 287
+ ++ + +VYPN G + S+ RH DGH
Sbjct: 242 LHEAT-RLPLVVYPNSGEQY---DAVSKTWRH-----DGH 272
>gi|161485699|ref|NP_636718.2| homocysteine methyltransferase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|162017097|ref|YP_243962.2| homocysteine methyltransferase [Xanthomonas campestris pv.
campestris str. 8004]
Length = 320
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 147/303 (48%), Gaps = 15/303 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ + D LWS+ L +PE + HRD+ + A + T
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
G + A A +V +A D+LA + A S+GPYG
Sbjct: 83 -------QGFAARGLGLAQSQALIARSVALAAQARADHLAAHPQAAPLWVAGSVGPYGAY 135
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y ++ A ++ +HRP + ALV AGVD LA ET+P+ E AL LL EF
Sbjct: 136 LADGSEYRGDY--ALPVAQMLDFHRPRIAALVDAGVDLLACETLPSASEITALRLLLEEF 193
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P AW SF+ +D H S G ++ V L A P Q+ A+G+NC+ V+ ++ +
Sbjct: 194 PQVHAWFSFTLRDAAHLSDGTPLAQ-VIPALDACP-QVVAVGINCIAIEQVTAALQSLA- 250
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
+ ++ +VYPN G +D+ +W T S+ QW G +IGGCC T +I
Sbjct: 251 ALTSLPLVVYPNSGEHYDASDKRWHAGTTVACSLATQRAQWHAAGARLIGGCCRTTPADI 310
Query: 566 QQM 568
+
Sbjct: 311 AAL 313
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 131/257 (50%), Gaps = 18/257 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + D LWS+ L +PE + HRD+ AGA ++ YQA
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASIGPY 127
G ++ L+ +SV L A+ D P + A S+GPY
Sbjct: 83 QGFAARGLGLAQSQALIARSVALAAQARADHLAAHPQ----------AAPLWVAGSVGPY 132
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y ++ A ++ +HRP + ALV AGVD LA ET+P+ E AL LL
Sbjct: 133 GAYLADGSEYRGDY--ALPVAQMLDFHRPRIAALVDAGVDLLACETLPSASEITALRLLL 190
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP AW SF+ +D H S G ++ V L A P Q+ A+G+NC+ V+ ++
Sbjct: 191 EEFPQVHAWFSFTLRDAAHLSDGTPLAQ-VIPALDACP-QVVAVGINCIAIEQVTAALQS 248
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + ++ +VYPN G
Sbjct: 249 LA-ALTSLPLVVYPNSG 264
>gi|156935092|ref|YP_001439008.1| homocysteine methyltransferase [Cronobacter sakazakii ATCC BAA-894]
gi|156533346|gb|ABU78172.1| hypothetical protein ESA_02943 [Cronobacter sakazakii ATCC BAA-894]
Length = 310
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 149/304 (49%), Gaps = 15/304 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D LWS+ L +PE H D+ R + A + T
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+G + EA A +VE +A DY + A S+GPYG
Sbjct: 76 -------AGFAARGLDEAQSRALIARSVELARQARDDYYHEQPDAGPLLVAGSVGPYGAY 128
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y +++ A+ +HRP VEAL+ AGVD LA ET+P+ EALAL LL +
Sbjct: 129 LADGSEYRGDY--ALSAAEFADFHRPRVEALLEAGVDLLACETLPSLPEALALAALLESY 186
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P +AW +F+ +D H S G +S + LA QI A+G+NCV + + +
Sbjct: 187 PQARAWFTFTLRDSDHISDGTPLSDVAAA--LAPYTQIVALGINCVALEKTTAALARLHD 244
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
+ + +VYPN G +D+V W D ++ HY+ +W G +IGGCC T +I
Sbjct: 245 A-TRLPLVVYPNSGEQYDAVSKTWRHDGHACQTLAHYLGEWRAAGAALIGGCCRTTPADI 303
Query: 566 QQMR 569
+R
Sbjct: 304 AALR 307
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 142/280 (50%), Gaps = 26/280 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L +PE H D+ RAGA ++ YQA
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKE-NQTPDINLNKTFNLLTGHIETAASIGPY 127
G E ++ L+ +SV+L A+D ++ PD G + A S+GPY
Sbjct: 76 AGFAARGLDEAQSRALIARSVELARQARDDYYHEQPD----------AGPLLVAGSVGPY 125
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y +++ A+ +HRP VEAL+ AGVD LA ET+P+ EALAL LL
Sbjct: 126 GAYLADGSEYRGDY--ALSAAEFADFHRPRVEALLEAGVDLLACETLPSLPEALALAALL 183
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
+P +AW +F+ +D H S G +S + LA QI A+G+NCV + +
Sbjct: 184 ESYPQARAWFTFTLRDSDHISDGTPLSDVAAA--LAPYTQIVALGINCVALEKTTAALAR 241
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGH 287
+ + + +VYPN G + S+ RH DGH
Sbjct: 242 LHDA-TRLPLVVYPNSGEQY---DAVSKTWRH-----DGH 272
>gi|429101648|ref|ZP_19163622.1| Homocysteine S-methyltransferase [Cronobacter turicensis 564]
gi|426288297|emb|CCJ89735.1| Homocysteine S-methyltransferase [Cronobacter turicensis 564]
Length = 310
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 145/304 (47%), Gaps = 17/304 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D LWS+ L +PE H D+ R + A + T
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-TAASIGPYGT 385
+G + EA A +VE L R + +P A S+GPYG
Sbjct: 76 -------AGFAARGLDEAQSWALIARSVE-LARQAREAFYKEQPDAGPLLVAGSVGPYGA 127
Query: 386 VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE 445
L DGSEY G Y +++ A+ +HRP VEAL+ AGVD LA ET+P+ EA AL L
Sbjct: 128 YLADGSEYRGDY--ALSAAEFADFHRPRVEALLAAGVDLLACETLPSLSEARALAAQLES 185
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 505
+P +AW +F+ +D H S G ++ + LA QI A+G+NCV + + +
Sbjct: 186 YPQARAWFTFTLRDSGHISDGTPLADVAAA--LAPYPQIVALGINCVALEKTTAALAHLH 243
Query: 506 QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQWLEEGVNIIGGCCEVTSYE 564
+ + +VYPN G +D+V W + L HY+ +W G +IGGCC T +
Sbjct: 244 DAT-RLPLVVYPNSGEQYDAVSKTWHHSGHACQTLAHYLDEWRAAGAALIGGCCRTTPAD 302
Query: 565 IQQM 568
I +
Sbjct: 303 IAAL 306
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 131/257 (50%), Gaps = 18/257 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L +PE H D+ RAGA ++ YQA
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK-ENQTPDINLNKTFNLLTGHIETAASIGPY 127
G E ++ L+ +SV+L A++ + PD G + A S+GPY
Sbjct: 76 AGFAARGLDEAQSWALIARSVELARQAREAFYKEQPD----------AGPLLVAGSVGPY 125
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y +++ A+ +HRP VEAL+ AGVD LA ET+P+ EA AL L
Sbjct: 126 GAYLADGSEYRGDY--ALSAAEFADFHRPRVEALLAAGVDLLACETLPSLSEARALAAQL 183
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
+P +AW +F+ +D H S G ++ + LA QI A+G+NCV + +
Sbjct: 184 ESYPQARAWFTFTLRDSGHISDGTPLADVAAA--LAPYPQIVALGINCVALEKTTAALAH 241
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + + +VYPN G
Sbjct: 242 LHDAT-RLPLVVYPNSG 257
>gi|90962661|ref|YP_536577.1| homocysteine methyltransferase [Lactobacillus salivarius UCC118]
gi|90821855|gb|ABE00494.1| Homocysteine S-methyltransferase [Lactobacillus salivarius UCC118]
Length = 307
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 142/256 (55%), Gaps = 21/256 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ ++ + R + + LW++ L E E H+ + AGAD+I + YQANV
Sbjct: 13 VLDGAMSTPLER--LGADTNNDLWTAKALIDNEELVYEIHKMYFEAGADLIITDTYQANV 70
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK-ENQTPDINLNKTFNLLTGHIETAASIGPY 127
K+GYSE+EA +L+ K+V++ A+D EN+T H A +IGPY
Sbjct: 71 QAFEKVGYSEKEARNLIKKAVKIAQKARDDYENRT------------GKHNYIAGTIGPY 118
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L +GSEY G Y S+ E +H P +E LV A VD LA+ET P E LA+++LL
Sbjct: 119 GAYLANGSEYRGDYELSVEEYQ--QFHLPRIEELVNAEVDILAIETQPKLDEVLAILELL 176
Query: 188 -REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+++P QK ++S++ DD S G + A+ + L + Q+ A+G+NCV+ V ++
Sbjct: 177 KKKYPQQKVYVSYTLSDDDTISDGTPLPRAIHA--LEDYSQVIAVGINCVKLELVEPALK 234
Query: 247 CIKQSHPTVQTIVYPN 262
+K+ IVYPN
Sbjct: 235 NMKEITDK-HLIVYPN 249
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 147/313 (46%), Gaps = 29/313 (9%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ ++ + R + + LW++ L E E H+ + E A + +
Sbjct: 13 VLDGAMSTPLER--LGADTNNDLWTAKALIDNEELVYEIHKMYF----EAGADL-----I 61
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT------AASI 380
+ D Y ++ + + + L++ V + ++T A +I
Sbjct: 62 ITDT------YQANVQAFEKVGYSEKEARNLIKKAVKIAQKARDDYENRTGKHNYIAGTI 115
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GPYG L +GSEY G Y S+ E +H P +E LV A VD LA+ET P E LA++
Sbjct: 116 GPYGAYLANGSEYRGDYELSVEEYQ--QFHLPRIEELVNAEVDILAIETQPKLDEVLAIL 173
Query: 441 KLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
+LL++ +P QK ++S++ DD S G + A+ + L + Q+ A+G+NCV+ V
Sbjct: 174 ELLKKKYPQQKVYVSYTLSDDDTISDGTPLPRAIHA--LEDYSQVIAVGINCVKLELVEP 231
Query: 500 LVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
++ +K+ IVYPN V+D W + + +P W E G IIGGCC
Sbjct: 232 ALKNMKEITDK-HLIVYPNSSAVYDPKSKTWSQPKTSATFEELIPNWYEAGARIIGGCCT 290
Query: 560 VTSYEIQQMRIMI 572
EI+ + I
Sbjct: 291 TGPKEIKAVADFI 303
>gi|297821248|ref|XP_002878507.1| homocysteine S-methyltransferase AtHMT-2 [Arabidopsis lyrata subsp.
lyrata]
gi|297324345|gb|EFH54766.1| homocysteine S-methyltransferase AtHMT-2 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 136/263 (51%), Gaps = 17/263 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG ++ RH D PLWS+ L T P H D++ AGADII S+ YQA +
Sbjct: 21 VIDGGLATEFERHGADLND--PLWSAKCLLTSPHLIHTVHLDYLEAGADIISSASYQATI 78
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH-IETAASIGPY 127
G+S + + LL KSV++ A++ + + +L I AAS+G Y
Sbjct: 79 QGFEAKGFSREISESLLRKSVEIACEARNTYYDKCGTSSSMDDKILKKRPILVAASVGSY 138
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEYSG Y D +T L +HR ++ L +G D +A ETIP + EA A +LL
Sbjct: 139 GAYLADGSEYSGVYGDLITLEKLKDFHRRRLQVLAESGADLIAFETIPNKIEAQAFAELL 198
Query: 188 RE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
E PG W SF+ KD + G+ I ++ + N +++ A+G+NC P +
Sbjct: 199 EEGDVKIPG---WFSFNSKDGVNVVSGDSIKECIS--IAENCEKVVAVGINCTPPRFIEG 253
Query: 244 LVRCIKQ--SHPTVQTIVYPNKG 264
LV I++ S P +VYPN G
Sbjct: 254 LVLEIEKVTSKP---ILVYPNSG 273
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 155/323 (47%), Gaps = 35/323 (10%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G ++DG ++ RH D PLWS+ L T P H D++ + +S
Sbjct: 18 GFAVIDGGLATEFERHGADLND--PLWSAKCLLTSPHLIHTVHLDYLEAGADIISSASYQ 75
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-------- 375
T+ G E G + ++E+ L R +VE A Y S S
Sbjct: 76 ATI--QGFEAKG-FSREISESLL----RKSVEIACEARNTYYDKCGTSSSMDDKILKKRP 128
Query: 376 --TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
AAS+G YG L DGSEYSG Y D +T L +HR ++ L +G D +A ETIP +
Sbjct: 129 ILVAASVGSYGAYLADGSEYSGVYGDLITLEKLKDFHRRRLQVLAESGADLIAFETIPNK 188
Query: 434 KEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGV 489
EA A +LL E PG W SF+ KD + G+ I ++ + N +++ A+G+
Sbjct: 189 IEAQAFAELLEEGDVKIPG---WFSFNSKDGVNVVSGDSIKECIS--IAENCEKVVAVGI 243
Query: 490 NCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTE--DEYSILHYVPQ 545
NC P + LV I++ S P +VYPN G +D+ +W++ + + YV +
Sbjct: 244 NCTPPRFIEGLVLEIEKVTSKP---ILVYPNSGESYDADRKEWVENTGVGDEDFVSYVEK 300
Query: 546 WLEEGVNIIGGCCEVTSYEIQQM 568
W++ GV+++GGCC T I+ +
Sbjct: 301 WMDAGVSLLGGCCRTTPTTIRAI 323
>gi|349918707|dbj|GAA34816.1| homocysteine S-methyltransferase [Clonorchis sinensis]
Length = 451
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 131/237 (55%), Gaps = 15/237 (6%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++++LDG S+ + + +DGH WS L +P E H+ ++RAG D++ ++ YQ
Sbjct: 12 EIRVLDGGVGSECQKRSHLPIDGHKAWSCRLLKEDPNLVCEVHKSYLRAGCDVLSTNTYQ 71
Query: 66 ANVDNLTK-LGYSEQEALDLLHKSVQLMNSA---KDKENQTPDINLNKTFNLLTGHIETA 121
A+ L K L S+ EA +L+ +V+L+ A ++E+ D + K+ L + A
Sbjct: 72 ASPLTLAKALKISDSEARELMRHAVRLVRRAIATTNEESFAADTHQWKSRKL---PVLVA 128
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
S+GPYG L DGSEYSG Y D MT +L+ +H + LV AGVD+LA ETIP E +
Sbjct: 129 GSLGPYGACLADGSEYSGSYADKMTFDELVEFHYARAKILVDAGVDFLAWETIPILMEVV 188
Query: 182 ALVKLLREFPGQKAWLSFSCKDDTHTSHGE---LISSAVTSCLLANPDQIQAIGVNC 235
A+ +++R P AWLS + + T G+ ++ + C DQI IGVNC
Sbjct: 189 AIAEVMRRLPQALAWLSVASSNGQTTVGGDPLHQVAFEIQKC-----DQIFGIGVNC 240
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 150/390 (38%), Gaps = 99/390 (25%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+++LDG S+ + + +DGH WS L +P E H+ ++R + +
Sbjct: 13 IRVLDGGVGSECQKRSHLPIDGHKAWSCRLLKEDPNLVCEVHKSYLRAGCDVLS------ 66
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA---------GVDYLALIKPSISSQ 375
T S + +++++ R V + RA D +
Sbjct: 67 TNTYQASPLTLAKALKISDSEARELMRHAVRLVRRAIATTNEESFAADTHQWKSRKLPVL 126
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
A S+GPYG L DGSEYSG Y D MT +L+ +H + LV AGVD+LA ETIP E
Sbjct: 127 VAGSLGPYGACLADGSEYSGSYADKMTFDELVEFHYARAKILVDAGVDFLAWETIPILME 186
Query: 436 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGE---LISSAVTSCLLANPDQIQAIGVNCV 492
+A+ +++R P AWLS + + T G+ ++ + C DQI IGVNC
Sbjct: 187 VVAIAEVMRRLPQALAWLSVASSNGQTTVGGDPLHQVAFEIQKC-----DQIFGIGVNCC 241
Query: 493 -----------------------------------RPSHVSTLVRCIKQSHPTVQTIVYP 517
RP H+ L + P ++Y
Sbjct: 242 IEHDKIGLALSNLNIGQDGCGPGTDDGYHPPPCSKRPEHLDKL-----STKPRKLLVLYA 296
Query: 518 NKGGVW------------------DSVHMKWLDTEDEYSILHYVPQWLEE---GVNI--- 553
N G +W + W T ++S + W +E GV +
Sbjct: 297 NSGEMWSPPPKGLSRRRGHWVWPPNKGPSVWARTIAQFS-MRRCADWEKELFNGVAVRRS 355
Query: 554 -----------IGGCCEVTSYEIQQMRIMI 572
+GGCC V EI+ + I++
Sbjct: 356 DPEAVYPKAQWVGGCCRVGPMEIRHLAILM 385
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRG-HIETAASIG 321
K +K+ D S ++ RH ++ V ++ T E +TH+ R + A S+G
Sbjct: 79 KALKISD-SEARELMRHAVRLVR-----RAIATTNEESFAADTHQWKSRKLPVLVAGSLG 132
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 366
PYG L DGSEYSG Y D MT +L+ +H + LV AGVD+LA
Sbjct: 133 PYGACLADGSEYSGSYADKMTFDELVEFHYARAKILVDAGVDFLA 177
>gi|422846590|ref|ZP_16893273.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK72]
gi|325687398|gb|EGD29419.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK72]
Length = 315
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 141/262 (53%), Gaps = 16/262 (6%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ +LDG+ +++ DV G LWS+ YL +P+ + H ++RAG+DII +S YQ
Sbjct: 12 EIIILDGALGTELESLGY-DVSGK-LWSAQYLLDQPQIIQDVHESYVRAGSDIITTSSYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQ--TPDINLNKTFNLLTGHIETAAS 123
A++ + G + ++ D L ++ L A + Q +P+ + + L+ G S
Sbjct: 70 ASISAFIEAGLTPEKGYDFLKETAFLAKKAIENVWQALSPEEQKQRPYPLVAG------S 123
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPY L DGSEY+G Y ++E + +HRP ++AL+ AG D LA+ETIP EA A+
Sbjct: 124 VGPYAAYLADGSEYTGDY--QLSEEEFQEFHRPRIQALLEAGCDLLAIETIPNGAEAAAI 181
Query: 184 VKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++LL EFP +A+LSF + +T S G I L Q+ A+G NC P +S
Sbjct: 182 LRLLAEEFPQAEAYLSFVAQSETAISDGTKIED--LGNLAQKSPQVLAVGFNCTAPHLIS 239
Query: 243 TLVRCIKQSHPTVQTIVYPNKG 264
L+ + Q + YPN G
Sbjct: 240 PLLDGLGQVCNKT-FLTYPNSG 260
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 152/314 (48%), Gaps = 27/314 (8%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIG 321
+ +LDG+ +++ DV G LWS+ YL +P+ + H ++R I T++
Sbjct: 13 IIILDGALGTELESLGY-DVSGK-LWSAQYLLDQPQIIQDVHESYVRAGSDIITTSSYQA 70
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-----T 376
+ G Y D + E +A + +E + +A + P Q
Sbjct: 71 SISAFIEAGLTPEKGY-DFLKETAFLA--KKAIENVWQA-------LSPEEQKQRPYPLV 120
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S+GPY L DGSEY+G Y ++E + +HRP ++AL+ AG D LA+ETIP EA
Sbjct: 121 AGSVGPYAAYLADGSEYTGDY--QLSEEEFQEFHRPRIQALLEAGCDLLAIETIPNGAEA 178
Query: 437 LALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
A+++LL EFP +A+LSF + +T S G I L Q+ A+G NC P
Sbjct: 179 AAILRLLAEEFPQAEAYLSFVAQSETAISDGTKIED--LGNLAQKSPQVLAVGFNCTAPH 236
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEGVNII 554
+S L+ + Q + YPN G ++ + W D E E S+L W E+GV +
Sbjct: 237 LISPLLDGLGQVCNKT-FLTYPNSGETYNGLTKTWHDDPEQERSLLENSKLWQEQGVQLF 295
Query: 555 GGCCEVTSYEIQQM 568
GGCC +I Q+
Sbjct: 296 GGCCRTRPEDIAQL 309
>gi|224062371|ref|XP_002300824.1| homocysteine s-methyltransferase [Populus trichocarpa]
gi|222842550|gb|EEE80097.1| homocysteine s-methyltransferase [Populus trichocarpa]
Length = 332
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 147/288 (51%), Gaps = 19/288 (6%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V ++DG +++ RH D PLWS+ L T P H D++ AGADII ++ YQA
Sbjct: 11 VAIIDGGLATELERHGADLND--PLWSAKCLLTSPHLVRAVHLDYLEAGADIIITASYQA 68
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK-----ENQTPDINLNKTFNLLTGHIETA 121
+ G+S +++ LL KSV++ A+D +PD + + L I A
Sbjct: 69 TIQGFEAKGFSREDSEALLRKSVEIACEARDIYYGRCREGSPDGSDDGRV-LKHRPILVA 127
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
AS+G YG L DGSEYSG+Y D++T L +HR V+ L +G D +A ET+P + EA
Sbjct: 128 ASVGSYGAYLADGSEYSGNYGDAITLETLKDFHRRRVQILAESGADLIAFETVPNKVEAQ 187
Query: 182 ALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVNCVR 237
A +LL E + AW SF+ KD + G+ + +S SC A A+G+NC
Sbjct: 188 AYAELLEEEDIKIPAWFSFNSKDGINVVSGDSLLECASIAESCKNA-----VAVGINCTP 242
Query: 238 PSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD 285
P + L+ IK+ T ++YPN G + DG V I D D
Sbjct: 243 PRFIHELILSIKKV-TTKPILIYPNSG-ESYDGDRKEWVQNTGISDQD 288
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 147/324 (45%), Gaps = 34/324 (10%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
GV ++DG +++ RH D PLWS+ L T P H D++ + +
Sbjct: 10 GVAIIDGGLATELERHGADLND--PLWSAKCLLTSPHLVRAVHLDYLEAGADIIITASYQ 67
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIK---PSISSQ----- 375
T+ G + D A R +VE A Y + P S
Sbjct: 68 ATI-------QGFEAKGFSREDSEALLRKSVEIACEARDIYYGRCREGSPDGSDDGRVLK 120
Query: 376 -----TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI 430
AAS+G YG L DGSEYSG+Y D++T L +HR V+ L +G D +A ET+
Sbjct: 121 HRPILVAASVGSYGAYLADGSEYSGNYGDAITLETLKDFHRRRVQILAESGADLIAFETV 180
Query: 431 PAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQA 486
P + EA A +LL E + AW SF+ KD + G+ + +S SC A A
Sbjct: 181 PNKVEAQAYAELLEEEDIKIPAWFSFNSKDGINVVSGDSLLECASIAESCKNA-----VA 235
Query: 487 IGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE--DEYSILHYVP 544
+G+NC P + L+ IK+ T ++YPN G +D +W+ + + YV
Sbjct: 236 VGINCTPPRFIHELILSIKKV-TTKPILIYPNSGESYDGDRKEWVQNTGISDQDFVSYVN 294
Query: 545 QWLEEGVNIIGGCCEVTSYEIQQM 568
+W E G ++GGCC T + I+ +
Sbjct: 295 KWCEIGAALVGGCCRTTPHTIRAI 318
>gi|22748320|gb|AAN05322.1| Putative homocysteine S-methyltransferase-1 [Oryza sativa Japonica
Group]
gi|108706902|gb|ABF94697.1| Homocysteine S-methyltransferase 1, putative, expressed [Oryza
sativa Japonica Group]
gi|125585432|gb|EAZ26096.1| hypothetical protein OsJ_09954 [Oryza sativa Japonica Group]
gi|218192354|gb|EEC74781.1| hypothetical protein OsI_10560 [Oryza sativa Indica Group]
Length = 329
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 140/264 (53%), Gaps = 13/264 (4%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG F +Q+ D++ PLWS+ L T+P E H ++ AGAD+I SS YQA +
Sbjct: 17 VIDGGFATQLEALG-ADIN-DPLWSAACLITKPHLIKEVHMQYLEAGADVIISSSYQATI 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G +EA LL +S++L A+D+ ++ +N AASIG YG
Sbjct: 75 PGFLARGMLLEEAEGLLRRSIELALEARDEFWKSTLRKSKPVYN----RALVAASIGSYG 130
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEYSG Y + +T L +HR ++ L AG D +A E IP + EA ALV+LL
Sbjct: 131 AYLADGSEYSGSYGEDITAEKLKDFHRRRLQVLASAGPDLIAFEAIPNKMEAQALVELLE 190
Query: 189 EFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
E Q +W+ FS D + GE + + L D++ +GVNC P + ++R
Sbjct: 191 EENIQVPSWICFSSVDGKNLCSGESFAECLQ--FLNASDKVTIVGVNCTPPQFIEGIIRE 248
Query: 248 IKQSHPTVQTI-VYPNKGVKLLDG 270
+K+ T + I VYPN G ++ DG
Sbjct: 249 LKKQ--TKKAIAVYPNSG-EIWDG 269
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 152/322 (47%), Gaps = 22/322 (6%)
Query: 254 TVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH 313
V+ IV G ++DG F +Q+ D++ PLWS+ L T+P E H ++
Sbjct: 4 AVEEIVRRAGGCAVIDGGFATQLEALG-ADIN-DPLWSAACLITKPHLIKEVHMQYLEAG 61
Query: 314 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY----LALIK 369
+ S T+ G M + R ++E + A ++ L K
Sbjct: 62 ADVIISSSYQATI-------PGFLARGMLLEEAEGLLRRSIELALEARDEFWKSTLRKSK 114
Query: 370 PSIS-SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE 428
P + + AASIG YG L DGSEYSG Y + +T L +HR ++ L AG D +A E
Sbjct: 115 PVYNRALVAASIGSYGAYLADGSEYSGSYGEDITAEKLKDFHRRRLQVLASAGPDLIAFE 174
Query: 429 TIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
IP + EA ALV+LL E Q +W+ FS D + GE + + L D++ +
Sbjct: 175 AIPNKMEAQALVELLEEENIQVPSWICFSSVDGKNLCSGESFAECLQ--FLNASDKVTIV 232
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTI-VYPNKGGVWDSVHMKWLDTE--DEYSILHYVP 544
GVNC P + ++R +K+ T + I VYPN G +WD +WL + S
Sbjct: 233 GVNCTPPQFIEGIIRELKKQ--TKKAIAVYPNSGEIWDGRAKRWLPAQCFGHKSFDALAK 290
Query: 545 QWLEEGVNIIGGCCEVTSYEIQ 566
+W E G +++GGCC T I+
Sbjct: 291 RWQEAGASLVGGCCRTTPSTIR 312
>gi|333398672|ref|ZP_08480485.1| homocysteine methyltransferase [Leuconostoc gelidum KCTC 3527]
gi|406600228|ref|YP_006745574.1| homocysteine methyltransferase [Leuconostoc gelidum JB7]
gi|406371763|gb|AFS40688.1| homocysteine methyltransferase [Leuconostoc gelidum JB7]
Length = 309
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 165/326 (50%), Gaps = 30/326 (9%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
Y GV ++DG S++ + I DV+ + WS+ L PE + H+++
Sbjct: 7 YIESGVVVIDGGMGSELEKRQI-DVN-NSWWSASALIQSPEDICDIHKNYFNA------- 57
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT--- 376
G L Y H + S T+ L L+ + V+ LA S+++
Sbjct: 58 ----GASLAITDTYQAH-IKSFTDQGL---SETKAYELIDSAVN-LARHGLENSNRSDGL 108
Query: 377 -AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
A S+GPYG L +G+EY+G+Y ++E++ A+HRP + L+ GVD ALET+P +E
Sbjct: 109 IAGSVGPYGAYLANGAEYTGNYY--LSESEFQAFHRPRIARLIADGVDVFALETMPNFEE 166
Query: 436 ALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
AL LL+ EFP A+LSF+ ++ H G +S AVT + QI+AIGVNC P
Sbjct: 167 TKALGHLLQQEFPSVDAYLSFATENGDHLWDGTPLSEAVT--YFESISQIKAIGVNCTSP 224
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554
++ ++ I + + + IVYPN G +D +W+ VP WL G ++I
Sbjct: 225 QNILPALKNIT-PNTSKKIIVYPNAGDDYDPETKRWVSQHGPIKWDELVPIWLAAGASLI 283
Query: 555 GGCCEVTSYEIQQMRIMIDEFNTKKN 580
GGCC + +I ++ + I NTK++
Sbjct: 284 GGCCRTSPDDINEIALAI--INTKQS 307
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 144/259 (55%), Gaps = 22/259 (8%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V ++DG S++ + I DV+ + WS+ L PE + H+++ AGA + + YQA
Sbjct: 12 VVVIDGGMGSELEKRQI-DVN-NSWWSASALIQSPEDICDIHKNYFNAGASLAITDTYQA 69
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
++ + T G SE +A +L+ +V L + N N++ L+ G S+GP
Sbjct: 70 HIKSFTDQGLSETKAYELIDSAVNLARHGLE--------NSNRSDGLIAG------SVGP 115
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L +G+EY+G+Y ++E++ A+HRP + L+ GVD ALET+P +E AL L
Sbjct: 116 YGAYLANGAEYTGNYY--LSESEFQAFHRPRIARLIADGVDVFALETMPNFEETKALGHL 173
Query: 187 L-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
L +EFP A+LSF+ ++ H G +S AVT + QI+AIGVNC P ++ +
Sbjct: 174 LQQEFPSVDAYLSFATENGDHLWDGTPLSEAVT--YFESISQIKAIGVNCTSPQNILPAL 231
Query: 246 RCIKQSHPTVQTIVYPNKG 264
+ I + + + IVYPN G
Sbjct: 232 KNIT-PNTSKKIIVYPNAG 249
>gi|284048701|ref|YP_003399040.1| Homocysteine S-methyltransferase [Acidaminococcus fermentans DSM
20731]
gi|283952922|gb|ADB47725.1| Homocysteine S-methyltransferase [Acidaminococcus fermentans DSM
20731]
Length = 317
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 137/259 (52%), Gaps = 13/259 (5%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K+ ++DGS + + + D++ + LW++ L PE + H D+ RAGAD + YQ
Sbjct: 13 KILVIDGSMGTALE-NLGADLN-NSLWTARVLANRPELVKQVHLDYFRAGADAGITCSYQ 70
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
A++ L G++EQEA +L+ +SV + A+ + + + L A +G
Sbjct: 71 ASIPGLVANGFTEQEAEELITRSVTIFQEARQEWWDREGKAAGRAWPLCL------AGVG 124
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY GHY ++ DL +HR E L +AG D L ET P+ +EAL V
Sbjct: 125 PYGAYLADGSEYRGHY--GVSREDLEKFHRRRAELLWQAGADVLLFETQPSLEEALVEVS 182
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
+ ++ G W+SFSC+D H G I A + P +++A+GVNC +P ++ +L+
Sbjct: 183 IAKDL-GAAFWVSFSCRDGLHICEGTPIREAAAEVVRQFP-EVEALGVNCTKPEYLVSLI 240
Query: 246 RCIKQSHPTVQTIVYPNKG 264
+K + VYPN G
Sbjct: 241 GELKTASDR-PIFVYPNSG 258
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 30/331 (9%)
Query: 254 TVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH 313
T++ I+ NK + ++DGS + + + D++ + LW++ L PE + H D+ R
Sbjct: 4 TLKNILDQNK-ILVIDGSMGTALE-NLGADLN-NSLWTARVLANRPELVKQVHLDYFRAG 60
Query: 314 IETA------ASIGPY---GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY 364
+ ASI G ++ E V EA W R +A RA
Sbjct: 61 ADAGITCSYQASIPGLVANGFTEQEAEELITRSVTIFQEARQEWWDREG-KAAGRAWPLC 119
Query: 365 LALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY 424
L A +GPYG L DGSEY GHY ++ DL +HR E L +AG D
Sbjct: 120 L------------AGVGPYGAYLADGSEYRGHY--GVSREDLEKFHRRRAELLWQAGADV 165
Query: 425 LALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 484
L ET P+ +EAL V + ++ G W+SFSC+D H G I A + P ++
Sbjct: 166 LLFETQPSLEEALVEVSIAKDL-GAAFWVSFSCRDGLHICEGTPIREAAAEVVRQFP-EV 223
Query: 485 QAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVP 544
+A+GVNC +P ++ +L+ +K + VYPN G +D V W + Y
Sbjct: 224 EALGVNCTKPEYLVSLIGELKTASDR-PIFVYPNSGEEYDPVTKTWHGVGTDRKFGDYAL 282
Query: 545 QWLEEGVNIIGGCCEVTSYEIQQMRIMIDEF 575
++++ G +GGCC + ++Q+ ++F
Sbjct: 283 EYMKAGAVAVGGCCTTVADHVRQVAAAREQF 313
>gi|422882217|ref|ZP_16928673.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK355]
gi|332360758|gb|EGJ38566.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK355]
Length = 315
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 143/264 (54%), Gaps = 20/264 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ +LDG+ +++ DV G LWS+ YL +P+ + H ++RAG+DII +S YQ
Sbjct: 12 EIIILDGALGTELESLGY-DVSGK-LWSAQYLLDQPQIIQDVHESYVRAGSDIITTSSYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAAS 123
A++ + G + ++ DLL ++V L A + + +P+ + + L+ G S
Sbjct: 70 ASISAFIEAGLTPEKGYDLLKETVFLAQKAIENVWQELSPEEQKQRPYPLIAG------S 123
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPY L DGSEY+G Y ++E + +HRP ++AL+ G D LA+ETIP EA A+
Sbjct: 124 VGPYAAYLADGSEYTGDY--QLSEGEFQEFHRPRIQALLEVGCDLLAIETIPNGAEAAAI 181
Query: 184 VKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++LL EFP +A+LSF + + S G I L Q+ A+G NC P ++
Sbjct: 182 LRLLAEEFPQAEAYLSFVAQSENAISDGTKIEE--LGNLAQESPQVLAVGFNCTAPHLIA 239
Query: 243 TLVRCIKQ--SHPTVQTIVYPNKG 264
L+ + Q + P + YPN G
Sbjct: 240 PLLDGLGQVCNKP---FLTYPNSG 260
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 149/316 (47%), Gaps = 31/316 (9%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIG 321
+ +LDG+ +++ DV G LWS+ YL +P+ + H ++R I T++
Sbjct: 13 IIILDGALGTELESLGY-DVSGK-LWSAQYLLDQPQIIQDVHESYVRAGSDIITTSSYQA 70
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-----T 376
+ G Y D + E +A +A + + P Q
Sbjct: 71 SISAFIEAGLTPEKGY-DLLKETVFLAQ---------KAIENVWQELSPEEQKQRPYPLI 120
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S+GPY L DGSEY+G Y ++E + +HRP ++AL+ G D LA+ETIP EA
Sbjct: 121 AGSVGPYAAYLADGSEYTGDY--QLSEGEFQEFHRPRIQALLEVGCDLLAIETIPNGAEA 178
Query: 437 LALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
A+++LL EFP +A+LSF + + S G I L Q+ A+G NC P
Sbjct: 179 AAILRLLAEEFPQAEAYLSFVAQSENAISDGTKIEE--LGNLAQESPQVLAVGFNCTAPH 236
Query: 496 HVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEGVN 552
++ L+ + Q + P + YPN G ++ + W D E + S+L W E+GV
Sbjct: 237 LIAPLLDGLGQVCNKP---FLTYPNSGETYNGLTKTWHDDPEQKRSLLENSKLWQEQGVQ 293
Query: 553 IIGGCCEVTSYEIQQM 568
+ GGCC +I Q+
Sbjct: 294 LFGGCCRTRPEDIAQL 309
>gi|115451621|ref|NP_001049411.1| Os03g0221200 [Oryza sativa Japonica Group]
gi|108706901|gb|ABF94696.1| Homocysteine S-methyltransferase 1, putative, expressed [Oryza
sativa Japonica Group]
gi|113547882|dbj|BAF11325.1| Os03g0221200 [Oryza sativa Japonica Group]
gi|215695514|dbj|BAG90705.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 140/264 (53%), Gaps = 13/264 (4%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG F +Q+ D++ PLWS+ L T+P E H ++ AGAD+I SS YQA +
Sbjct: 17 VIDGGFATQLEALG-ADIN-DPLWSAACLITKPHLIKEVHMQYLEAGADVIISSSYQATI 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G +EA LL +S++L A+D+ ++ +N AASIG YG
Sbjct: 75 PGFLARGMLLEEAEGLLRRSIELALEARDEFWKSTLRKSKPVYN----RALVAASIGSYG 130
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEYSG Y + +T L +HR ++ L AG D +A E IP + EA ALV+LL
Sbjct: 131 AYLADGSEYSGSYGEDITAEKLKDFHRRRLQVLASAGPDLIAFEAIPNKMEAQALVELLE 190
Query: 189 EFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
E Q +W+ FS D + GE + + L D++ +GVNC P + ++R
Sbjct: 191 EENIQVPSWICFSSVDGKNLCSGESFAECLQ--FLNASDKVTIVGVNCTPPQFIEGIIRE 248
Query: 248 IKQSHPTVQTI-VYPNKGVKLLDG 270
+K+ T + I VYPN G ++ DG
Sbjct: 249 LKKQ--TKKAIAVYPNSG-EIWDG 269
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 136/285 (47%), Gaps = 20/285 (7%)
Query: 254 TVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH 313
V+ IV G ++DG F +Q+ D++ PLWS+ L T+P E H ++
Sbjct: 4 AVEEIVRRAGGCAVIDGGFATQLEALG-ADIN-DPLWSAACLITKPHLIKEVHMQYLEAG 61
Query: 314 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY----LALIK 369
+ S T+ G M + R ++E + A ++ L K
Sbjct: 62 ADVIISSSYQATI-------PGFLARGMLLEEAEGLLRRSIELALEARDEFWKSTLRKSK 114
Query: 370 PSIS-SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE 428
P + + AASIG YG L DGSEYSG Y + +T L +HR ++ L AG D +A E
Sbjct: 115 PVYNRALVAASIGSYGAYLADGSEYSGSYGEDITAEKLKDFHRRRLQVLASAGPDLIAFE 174
Query: 429 TIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
IP + EA ALV+LL E Q +W+ FS D + GE + + L D++ +
Sbjct: 175 AIPNKMEAQALVELLEEENIQVPSWICFSSVDGKNLCSGESFAECLQ--FLNASDKVTIV 232
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTI-VYPNKGGVWDSVHMKWL 531
GVNC P + ++R +K+ T + I VYPN G +WD +WL
Sbjct: 233 GVNCTPPQFIEGIIRELKKQ--TKKAIAVYPNSGEIWDGRAKRWL 275
>gi|418018246|ref|ZP_12657802.1| homocysteine methyltransferase [Streptococcus salivarius M18]
gi|345527095|gb|EGX30406.1| homocysteine methyltransferase [Streptococcus salivarius M18]
Length = 316
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 140/250 (56%), Gaps = 16/250 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
D+ G LWS+ YL +PE + H ++ AGAD+I +S YQA + L G +++EA +
Sbjct: 30 DISGK-LWSAKYLLEKPEVIQKIHETYVAAGADLITTSSYQATLPGLIDAGLTKEEAEQI 88
Query: 85 LHKSVQLMNSAKDKENQTPDIN--LNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV 142
+ +VQL A+DK T D + N+ + L++G +GPY L +GSEY+G Y
Sbjct: 89 ITLTVQLAKDARDKVWATLDDSEKANRPYPLISG------DVGPYAAYLANGSEYTGDYG 142
Query: 143 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-REFPGQKAWLSFSC 201
EA L +HRP ++ L+ GVD LALETIP EA L++LL EFP +A++SF+
Sbjct: 143 QITIEA-LKEFHRPRIQILLDQGVDLLALETIPNHLEAQVLIELLAEEFPEAEAYISFTV 201
Query: 202 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 261
++ S G + + L+ DQI A+G+NC P + + +K + + I YP
Sbjct: 202 QEPGTISDGTSLDE--IAQLVGQSDQILALGINCSSPLLYNQALAILKNAGKAL--ITYP 257
Query: 262 NKGVKLLDGS 271
N G ++ DGS
Sbjct: 258 NSG-EVYDGS 266
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 156/327 (47%), Gaps = 31/327 (9%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAA 318
NK +L G+ +++ D+ G LWS+ YL +PE + H ++ I T++
Sbjct: 10 NKSPLILHGALGTEMESLGY-DISGK-LWSAKYLLEKPEVIQKIHETYVAAGADLITTSS 67
Query: 319 SIGPYGTVLRDG-SEYSGHYVDSMTEADLIAWHRPNVEALV----RAGVDYLALIKPSIS 373
++ G ++ + ++T L R V A + +A Y P IS
Sbjct: 68 YQATLPGLIDAGLTKEEAEQIITLT-VQLAKDARDKVWATLDDSEKANRPY-----PLIS 121
Query: 374 SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
+GPY L +GSEY+G Y EA L +HRP ++ L+ GVD LALETIP
Sbjct: 122 ----GDVGPYAAYLANGSEYTGDYGQITIEA-LKEFHRPRIQILLDQGVDLLALETIPNH 176
Query: 434 KEALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 492
EA L++LL EFP +A++SF+ ++ S G + + L+ DQI A+G+NC
Sbjct: 177 LEAQVLIELLAEEFPEAEAYISFTVQEPGTISDGTSLDE--IAQLVGQSDQILALGINCS 234
Query: 493 RPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE-DEYSILHYVPQW-LEEG 550
P + + +K + + I YPN G V+D W + D +++ + W + G
Sbjct: 235 SPLLYNQALAILKNAGKAL--ITYPNSGEVYDGSTQTWKPKDKDALTLVEHSKDWHTQFG 292
Query: 551 VNIIGGCCEVTSYEIQQMRIMIDEFNT 577
V I+GGCC +I + + EF T
Sbjct: 293 VKILGGCCRTRPNDI---KALYAEFRT 316
>gi|336359707|gb|AEI53593.1| selenocysteine methyltransferase [Astragalus chrysochlorus]
Length = 339
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 139/267 (52%), Gaps = 21/267 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG +++ RH D PLWS+ L + P + H D++ GADII ++ YQA +
Sbjct: 18 VIDGGLATELERHGADLND--PLWSAKCLLSSPHLIRQVHLDYLENGADIIITASYQATI 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQ-----TPDINLNKTFNLLTGHIETAAS 123
G+S++E LL +SV++ A+D Q + D N + + L I A S
Sbjct: 76 QGFKAKGFSDEEGEALLRRSVEIAREARDLYYQRCAESSSDNNGDDSRILKQRPILIAGS 135
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+G YG L DGSEYSG+Y D++ L +HR V+ L +G D LA ETIP + EA A
Sbjct: 136 VGSYGAYLADGSEYSGNYGDAIKLETLKDFHRRRVQILADSGADLLAFETIPNKLEAQAY 195
Query: 184 VKLLREFP-GQKAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVNCVRPS 239
LL E AW +F+ KD T+ G+ I S SC +++ A+G+NC P
Sbjct: 196 ADLLEEENITTPAWFTFNSKDGTNVVSGDSIEECGSIAESC-----NKVVAVGINCTPPR 250
Query: 240 HVSTLVRCIKQ--SHPTVQTIVYPNKG 264
+ L+ +K+ + P V +YPN G
Sbjct: 251 FIHDLILLLKKVTAKPIV---IYPNSG 274
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 150/328 (45%), Gaps = 29/328 (8%)
Query: 251 SHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFI 310
S + ++ N G ++DG +++ RH D PLWS+ L + P + H D++
Sbjct: 2 SSSLITDFLHQNGGTAVIDGGLATELERHGADLND--PLWSAKCLLSSPHLIRQVHLDYL 59
Query: 311 RGHIE---------TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG 361
+ T G +G V+ EA + + R + G
Sbjct: 60 ENGADIIITASYQATIQGFKAKGFSDEEGEALLRRSVEIAREARDLYYQRCAESSSDNNG 119
Query: 362 VDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG 421
D L + I A S+G YG L DGSEYSG+Y D++ L +HR V+ L +G
Sbjct: 120 DDSRILKQRPI--LIAGSVGSYGAYLADGSEYSGNYGDAIKLETLKDFHRRRVQILADSG 177
Query: 422 VDYLALETIPAEKEALALVKLLREFP-GQKAWLSFSCKDDTHTSHGELI---SSAVTSCL 477
D LA ETIP + EA A LL E AW +F+ KD T+ G+ I S SC
Sbjct: 178 ADLLAFETIPNKLEAQAYADLLEEENITTPAWFTFNSKDGTNVVSGDSIEECGSIAESC- 236
Query: 478 LANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTED 535
+++ A+G+NC P + L+ +K+ + P V +YPN G +D + +W+
Sbjct: 237 ----NKVVAVGINCTPPRFIHDLILLLKKVTAKPIV---IYPNSGETYDGIRKEWMQNSG 289
Query: 536 --EYSILHYVPQWLEEGVNIIGGCCEVT 561
+ + YV +W E G +++GGCC T
Sbjct: 290 VTDEDFVSYVDKWCESGASLVGGCCRTT 317
>gi|385841129|ref|YP_005864453.1| Homocysteine S-methyltransferase [Lactobacillus salivarius CECT
5713]
gi|300215250|gb|ADJ79666.1| Homocysteine S-methyltransferase [Lactobacillus salivarius CECT
5713]
Length = 290
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 131/234 (55%), Gaps = 19/234 (8%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQ 90
LW++ L E E H+ + AGAD+I + YQANV K+GYSE+EA +L+ K+V+
Sbjct: 16 LWTAKALIDNEELVYEVHKMYFEAGADLIITDTYQANVQAFEKVGYSEKEARNLIKKAVK 75
Query: 91 LMNSAKDK-ENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD 149
+ A+D EN+T H A +IGPYG L +GSEY G Y S+ E
Sbjct: 76 IAQKARDDYENRT------------GKHNYIAGTIGPYGAYLANGSEYRGDYELSVEEYQ 123
Query: 150 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE-FPGQKAWLSFSCKDDTHTS 208
+H P +E LV A VD LA+ET P E LA+++LL+E +P QK ++S++ DD S
Sbjct: 124 --QFHLPRIEELVNAEVDILAIETQPKLDEVLAILELLKEKYPQQKVYVSYTLSDDDTIS 181
Query: 209 HGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPN 262
G + A+ + L + Q+ A+G+NCV+ V ++ +K+ IVYPN
Sbjct: 182 DGTPLPRAIHA--LEDYSQVIAVGINCVKLELVEPALKNMKEITDK-HLIVYPN 232
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 105/197 (53%), Gaps = 6/197 (3%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A +IGPYG L +GSEY G Y S+ E +H P +E LV A VD LA+ET P E
Sbjct: 95 AGTIGPYGAYLANGSEYRGDYELSVEEYQ--QFHLPRIEELVNAEVDILAIETQPKLDEV 152
Query: 437 LALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
LA+++LL+E +P QK ++S++ DD S G + A+ + L + Q+ A+G+NCV+
Sbjct: 153 LAILELLKEKYPQQKVYVSYTLSDDDTISDGTPLPRAIHA--LEDYSQVIAVGINCVKLE 210
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
V ++ +K+ IVYPN V+D W + + +P W E IIG
Sbjct: 211 LVEPALKNMKEITDK-HLIVYPNSSAVYDPKSKTWSQPKTSATFEELIPNWYEARARIIG 269
Query: 556 GCCEVTSYEIQQMRIMI 572
GCC EI+ + I
Sbjct: 270 GCCTTGPKEIKAVADFI 286
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 313 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
H A +IGPYG L +GSEY G Y S+ E +H P +E LV A VD LA+
Sbjct: 91 HNYIAGTIGPYGAYLANGSEYRGDYELSVEEYQ--QFHLPRIEELVNAEVDILAI 143
>gi|94958323|gb|ABF47292.1| selenocysteine methyltransferase [Camellia sinensis]
Length = 351
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 139/266 (52%), Gaps = 16/266 (6%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V ++DG +++ RH D PLWS+ L T P H D++ AGADII ++ YQA
Sbjct: 30 VAIIDGGLATELERHGADLND--PLWSAKCLLTSPHLIRRVHLDYLEAGADIIITASYQA 87
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD--KENQTPDINLNKTFNLLTGH--IETAA 122
+ G+S++E+ +L + V++ A+D EN N + + H I AA
Sbjct: 88 TIQGFEAKGFSQEESEAMLKRCVEIAREARDIYYENCRELSNDSADDGRVLKHRSILVAA 147
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
S+G YG L DGSEYSG Y ++M L +HR V+ L AG D +A ET+P + EA A
Sbjct: 148 SVGSYGAYLADGSEYSGDYGNAMDLEFLKDFHRRRVQILADAGADLIAFETVPNKLEAQA 207
Query: 183 LVKLLREFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVNCVRP 238
+LL E + AW SF+ KD H G+ + ++ +C ++ A+G+NC P
Sbjct: 208 YARLLEEEDIKIPAWFSFNSKDGVHVVSGDSLLECAAIAEAC-----KKVVAVGINCTPP 262
Query: 239 SHVSTLVRCIKQSHPTVQTIVYPNKG 264
+ L+ +K+ T ++YPN G
Sbjct: 263 RFIHDLILTVKKG-TTKPILIYPNSG 287
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 151/323 (46%), Gaps = 34/323 (10%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V ++DG +++ RH D PLWS+ L T P H D++ + +
Sbjct: 30 VAIIDGGLATELERHGADLND--PLWSAKCLLTSPHLIRRVHLDYLEAGADIIITASYQA 87
Query: 325 TVLRDGSEYSG-----------HYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSIS 373
T+ G E G V+ EA I + N L D ++K S
Sbjct: 88 TI--QGFEAKGFSQEESEAMLKRCVEIAREARDIYYE--NCRELSNDSADDGRVLKHR-S 142
Query: 374 SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
AAS+G YG L DGSEYSG Y ++M L +HR V+ L AG D +A ET+P +
Sbjct: 143 ILVAASVGSYGAYLADGSEYSGDYGNAMDLEFLKDFHRRRVQILADAGADLIAFETVPNK 202
Query: 434 KEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGV 489
EA A +LL E + AW SF+ KD H G+ + ++ +C ++ A+G+
Sbjct: 203 LEAQAYARLLEEEDIKIPAWFSFNSKDGVHVVSGDSLLECAAIAEAC-----KKVVAVGI 257
Query: 490 NCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLD----TEDEYSILHYVPQ 545
NC P + L+ +K+ T ++YPN G +D+ +W+ ++D++ + V
Sbjct: 258 NCTPPRFIHDLILTVKKG-TTKPILIYPNSGESYDADKKEWVQNTGVSDDDF--VSCVNT 314
Query: 546 WLEEGVNIIGGCCEVTSYEIQQM 568
W + G +++GGCC T I+ +
Sbjct: 315 WCDVGASLVGGCCRTTPNTIRAI 337
>gi|389842023|ref|YP_006344107.1| homocysteine methyltransferase [Cronobacter sakazakii ES15]
gi|387852499|gb|AFK00597.1| homocysteine methyltransferase [Cronobacter sakazakii ES15]
Length = 310
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 151/314 (48%), Gaps = 15/314 (4%)
Query: 257 TIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIET 316
T + + +LDG+ +++ D LWS+ L +PE H D+ R +
Sbjct: 8 TALLSQQPFVVLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQC 65
Query: 317 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT 376
A + T +G + EA A +VE +A DY +
Sbjct: 66 AITASYQATP-------AGFAARGLDEAQSRALIARSVELARQARDDYYHEQPDAGPLLV 118
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S+GPYG L DGSEY G Y +++ A+ +HRP VEAL+ AGVD LA ET+P+ EA
Sbjct: 119 AGSVGPYGAYLADGSEYRGDY--ALSAAEFADFHRPRVEALLEAGVDLLACETLPSLPEA 176
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
LAL LL +P +AW +F+ +D H S G + + LA QI A+G+NCV
Sbjct: 177 LALAALLESYPQARAWFTFTLRDSDHISDGTPLGDVAAA--LAPYPQIVALGINCVALEK 234
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEGVNIIG 555
+ + + ++ + +VYPN G +D+V W D ++ HY+ W G +IG
Sbjct: 235 TTAALARLHEAT-RLPLVVYPNSGEQYDAVSKTWRHDGHACQTLAHYLDAWRAAGAALIG 293
Query: 556 GCCEVTSYEIQQMR 569
GCC T +I +R
Sbjct: 294 GCCRTTPADIAALR 307
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 142/280 (50%), Gaps = 26/280 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L +PE H D+ RAGA ++ YQA
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKE-NQTPDINLNKTFNLLTGHIETAASIGPY 127
G E ++ L+ +SV+L A+D ++ PD G + A S+GPY
Sbjct: 76 AGFAARGLDEAQSRALIARSVELARQARDDYYHEQPD----------AGPLLVAGSVGPY 125
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y +++ A+ +HRP VEAL+ AGVD LA ET+P+ EALAL LL
Sbjct: 126 GAYLADGSEYRGDY--ALSAAEFADFHRPRVEALLEAGVDLLACETLPSLPEALALAALL 183
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
+P +AW +F+ +D H S G + + LA QI A+G+NCV + +
Sbjct: 184 ESYPQARAWFTFTLRDSDHISDGTPLGDVAAA--LAPYPQIVALGINCVALEKTTAALAR 241
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGH 287
+ ++ + +VYPN G + S+ RH DGH
Sbjct: 242 LHEAT-RLPLVVYPNSGEQY---DAVSKTWRH-----DGH 272
>gi|430845399|ref|ZP_19463289.1| hypothetical protein OGQ_02312 [Enterococcus faecium E1050]
gi|430495609|gb|ELA71765.1| hypothetical protein OGQ_02312 [Enterococcus faecium E1050]
Length = 306
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 140/259 (54%), Gaps = 20/259 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
KV L+DGS + + + D LW++ L EP+ + H+ + AGA+I ++ YQ
Sbjct: 11 KVILIDGSMSLGLEEQGLDLND--ELWTAKALVNEPDKIEKVHQKYYDAGANIAITASYQ 68
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
A V +LG++ +E+ L+ ++V+L K+ QT L + + AAS+G
Sbjct: 69 ATVAGFDRLGHTTEESRALIKRTVELA-----KQAQTKSQGLQEKW--------VAASVG 115
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY G+Y S TE L+ +HR +E L+ +G D LA+ETIP E A+++
Sbjct: 116 PYGAYLADGSEYRGNYGLSQTE--LVDFHRERLELLLESGADLLAIETIPDLTEIQAVIE 173
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
LL + P AWL+ + KDD H G + V L + +QI A GVNCV+P V +
Sbjct: 174 LLAQHPKTTAWLTVTLKDDHHLCDGTDLR--VFQLLAESSEQIIAYGVNCVQPDLVLPAL 231
Query: 246 RCIKQSHPTVQTIVYPNKG 264
+K+ T + YPN G
Sbjct: 232 EYLKEI-ATKPLVAYPNSG 249
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 148/309 (47%), Gaps = 19/309 (6%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
N+ V L+DGS + + + D LW++ L EP+ + H+ + A +
Sbjct: 9 NQKVILIDGSMSLGLEEQGLDLND--ELWTAKALVNEPDKIEKVHQKYYDAGANIAITAS 66
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
TV G + GH T + A + VE +A L + + AAS+G
Sbjct: 67 YQATVA--GFDRLGH-----TTEESRALIKRTVELAKQAQTKSQGLQEKWV----AASVG 115
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG L DGSEY G+Y S TE L+ +HR +E L+ +G D LA+ETIP E A+++
Sbjct: 116 PYGAYLADGSEYRGNYGLSQTE--LVDFHRERLELLLESGADLLAIETIPDLTEIQAVIE 173
Query: 442 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
LL + P AWL+ + KDD H G + V L + +QI A GVNCV+P V +
Sbjct: 174 LLAQHPKTTAWLTVTLKDDHHLCDGTDLR--VFQLLAESSEQIIAYGVNCVQPDLVLPAL 231
Query: 502 RCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQWLEEGVNIIGGCCEV 560
+K+ T + YPN G +D+ W + + + +W G IGGCC
Sbjct: 232 EYLKEI-ATKPLVAYPNSGATYDATTKVWTHSHAVDEVFSNEALKWHGSGCKWIGGCCCT 290
Query: 561 TSYEIQQMR 569
++ EI ++
Sbjct: 291 SAKEISLLK 299
>gi|78047005|ref|YP_363180.1| homocysteine methyltransferase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78035435|emb|CAJ23080.1| Homocysteine S-methyltransferase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 321
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 160/333 (48%), Gaps = 30/333 (9%)
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE 300
++ L R + + P Q + + G +LDG+ +++ + D LWS+ L +PE
Sbjct: 1 MTILPRQPRANAPFSQALQH--DGYVVLDGALATELEQRGCDLNDA--LWSARVLMEQPE 56
Query: 301 ACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 360
+ HRD+ + A + T L ++ +D+ LIA +V +A
Sbjct: 57 LIYQVHRDYFAAGAQCAITASYQATPL----GFAARGLDAAQAQALIA---RSVALAAQA 109
Query: 361 GVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 420
D+L L + A S+GPYG L DGSEY G YV + + L+ +HRP + AL A
Sbjct: 110 RADHLTLHPYAAPLWVAGSVGPYGAYLADGSEYRGDYVLPIEQ--LMDFHRPRIAALAEA 167
Query: 421 GVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 479
GVD LA ET+P+ E +AL +LL+ EFP AW SF+ +D H S G ++ V + L
Sbjct: 168 GVDLLACETLPSASEIVALRQLLQHEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LD 225
Query: 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-------LD 532
Q+ A+G+NC+ + + + + +VYPN G +D+ +W L
Sbjct: 226 ACAQVIAVGINCIALDQARAALHSLA-ALTALPLVVYPNSGEHYDASDKRWHAGHGAALT 284
Query: 533 TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
D+++ WL G +IGGCC +I
Sbjct: 285 LADQHA------HWLAAGARLIGGCCRTAPRDI 311
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 129/257 (50%), Gaps = 17/257 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + D LWS+ L +PE + HRD+ AGA ++ YQA
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G +A L+ +SV L A+ + T + + A S+GPYG
Sbjct: 83 LGFAARGLDAAQAQALIARSVALAAQARAD---------HLTLHPYAAPLWVAGSVGPYG 133
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV + + L+ +HRP + AL AGVD LA ET+P+ E +AL +LL+
Sbjct: 134 AYLADGSEYRGDYVLPIEQ--LMDFHRPRIAALAEAGVDLLACETLPSASEIVALRQLLQ 191
Query: 189 -EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP AW SF+ +D H S G ++ V + L Q+ A+G+NC+ +
Sbjct: 192 HEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LDACAQVIAVGINCIALDQARAALHS 249
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + + +VYPN G
Sbjct: 250 LA-ALTALPLVVYPNSG 265
>gi|381171172|ref|ZP_09880321.1| homocysteine S-methyltransferase [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380688396|emb|CCG36808.1| homocysteine S-methyltransferase [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 321
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 161/333 (48%), Gaps = 30/333 (9%)
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE 300
++ L R + + P Q + + G +LDG+ +++ + D LWS+ L +PE
Sbjct: 1 MTILPRQPRANAPFSQALQH--DGYVVLDGALATELEQRGCDLNDA--LWSARVLMEQPE 56
Query: 301 ACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 360
+ HRD+ + A + T L ++ +D LIA +V ++A
Sbjct: 57 LIYQVHRDYFAAGAQCAITASYQATPL----GFAARGLDVAQAQALIA---RSVALAMQA 109
Query: 361 GVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 420
D+L L + A S+GPYG L DGSEY G YV + + L+ +HRP + AL A
Sbjct: 110 RADHLTLHPHAAPLWVAGSVGPYGAYLADGSEYRGDYVLPIEQ--LMDFHRPRIAALAEA 167
Query: 421 GVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 479
GVD LA ET+P+ E +AL +LL+ EFP AW SF+ +D H S G ++ V + L
Sbjct: 168 GVDLLACETLPSASEIVALRQLLQHEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LD 225
Query: 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-------LD 532
Q+ A+G+NC+ + + + + + +VYPN G +D+ +W L
Sbjct: 226 ACAQVIAVGINCIALDQATAALHSLS-ALTALPLVVYPNSGEHYDASDKRWHVSRGAALT 284
Query: 533 TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
D+++ WL G +IGGCC +I
Sbjct: 285 LADQHA------HWLAAGARLIGGCCRTAPRDI 311
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 130/257 (50%), Gaps = 17/257 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + D LWS+ L +PE + HRD+ AGA ++ YQA
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G +A L+ +SV L A+ + T + + A S+GPYG
Sbjct: 83 LGFAARGLDVAQAQALIARSVALAMQARAD---------HLTLHPHAAPLWVAGSVGPYG 133
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV + + L+ +HRP + AL AGVD LA ET+P+ E +AL +LL+
Sbjct: 134 AYLADGSEYRGDYVLPIEQ--LMDFHRPRIAALAEAGVDLLACETLPSASEIVALRQLLQ 191
Query: 189 -EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP AW SF+ +D H S G ++ V + L Q+ A+G+NC+ + +
Sbjct: 192 HEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LDACAQVIAVGINCIALDQATAALHS 249
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + + +VYPN G
Sbjct: 250 LS-ALTALPLVVYPNSG 265
>gi|228478144|ref|ZP_04062752.1| homocysteine S-methyltransferase 1 [Streptococcus salivarius SK126]
gi|340399273|ref|YP_004728298.1| homocysteine S-methyltransferase 1 [Streptococcus salivarius
CCHSS3]
gi|228249823|gb|EEK09093.1| homocysteine S-methyltransferase 1 [Streptococcus salivarius SK126]
gi|338743266|emb|CCB93774.1| homocysteine S-methyltransferase 1 (S-methylmethionine:homocysteine
methyltransferase 1) (SMM:Hcy S-methyltransferase 1)
(AtHMT-1) [Streptococcus salivarius CCHSS3]
Length = 316
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 143/250 (57%), Gaps = 16/250 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
D+ G LWS+ YL +PE + H ++ AG+D+I +S YQA + L G +E+EA +
Sbjct: 30 DISGK-LWSAKYLLDKPEVIQKIHETYVAAGSDLITTSSYQATLPGLIDAGLTEKEAEQI 88
Query: 85 LHKSVQLMNSAKDKENQTPDIN--LNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV 142
+ +VQL +A+DK T D + + + L++G +GPY L +GSEY+G Y
Sbjct: 89 IALTVQLAKNARDKVWATLDDSEKAKRPYPLISG------DVGPYAAYLANGSEYTGDY- 141
Query: 143 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-REFPGQKAWLSFSC 201
+T +L +HRP ++ L+ GVD LALETIP EA AL++LL EFP +A++SF+
Sbjct: 142 GRITIKELKEFHRPRIQILLDQGVDLLALETIPNHLEAQALIELLAEEFPEAEAYISFTV 201
Query: 202 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 261
++ S G + + L++ DQI A+G+NC P + + +K + + I YP
Sbjct: 202 QEPGTISDGTSLDE--ITQLVSQSDQILALGINCSSPLLYNQALTILKNAGKAL--ITYP 257
Query: 262 NKGVKLLDGS 271
N G ++ DGS
Sbjct: 258 NSG-EVYDGS 266
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 160/327 (48%), Gaps = 31/327 (9%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAA 318
NK +L G+ +++ D+ G LWS+ YL +PE + H ++ I T++
Sbjct: 10 NKSPLILHGALGTEMESLGY-DISGK-LWSAKYLLDKPEVIQKIHETYVAAGSDLITTSS 67
Query: 319 SIGPYGTVLRDG-SEYSGHYVDSMTEADLIAWHRPNVEALV----RAGVDYLALIKPSIS 373
++ G +E + ++T L R V A + +A Y P IS
Sbjct: 68 YQATLPGLIDAGLTEKEAEQIIALT-VQLAKNARDKVWATLDDSEKAKRPY-----PLIS 121
Query: 374 SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
+GPY L +GSEY+G Y +T +L +HRP ++ L+ GVD LALETIP
Sbjct: 122 ----GDVGPYAAYLANGSEYTGDY-GRITIKELKEFHRPRIQILLDQGVDLLALETIPNH 176
Query: 434 KEALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 492
EA AL++LL EFP +A++SF+ ++ S G + + L++ DQI A+G+NC
Sbjct: 177 LEAQALIELLAEEFPEAEAYISFTVQEPGTISDGTSLDE--ITQLVSQSDQILALGINCS 234
Query: 493 RPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE-DEYSILHYVPQWLEE-G 550
P + + +K + + I YPN G V+D W + D +++ + W ++ G
Sbjct: 235 SPLLYNQALTILKNAGKAL--ITYPNSGEVYDGSTQTWKPKDKDALTLVEHSKDWHDQFG 292
Query: 551 VNIIGGCCEVTSYEIQQMRIMIDEFNT 577
V I+GGCC +I + + EF T
Sbjct: 293 VKILGGCCRTRPNDI---KALYAEFRT 316
>gi|15841982|ref|NP_337019.1| homocysteine methyltransferase [Mycobacterium tuberculosis CDC1551]
gi|254232592|ref|ZP_04925919.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
C]
gi|254365234|ref|ZP_04981280.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
str. Haarlem]
gi|422813502|ref|ZP_16861877.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
CDC1551A]
gi|13882256|gb|AAK46833.1| homocysteine S-methyltransferase [Mycobacterium tuberculosis
CDC1551]
gi|124601651|gb|EAY60661.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
C]
gi|134150748|gb|EBA42793.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
str. Haarlem]
gi|323718964|gb|EGB28114.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
CDC1551A]
gi|379028761|dbj|BAL66494.1| homocysteine methyltransferase [Mycobacterium tuberculosis str.
Erdman = ATCC 35801]
gi|440581936|emb|CCG12339.1| putative HOMOCYSTEINE S-METHYLTRANSFERASE MMUM
(S-METHYLMETHIONINE:HOMOCYSTEINE METHYLTRANSFERASE)
(CYSTEINE METHYLTRANSFERASE) [Mycobacterium tuberculosis
7199-99]
Length = 302
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 7 VKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
V + DG +++ H + D PLWS+ L P A H + RAGA I ++ Y
Sbjct: 8 VLISDGGLATELEARGHDLSD----PLWSARLLVDAPHAITAVHTAYFRAGAQIATTASY 63
Query: 65 QANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
QA+ + G +A LL +SV+L +A+D+ G + AAS+
Sbjct: 64 QASFEGFAARGIGHDDATVLLRRSVELAQAARDEVG--------------VGGLSVAASV 109
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSEY G Y ++ A L+ WH P +E LV AG D LAL+TIP EA ALV
Sbjct: 110 GPYGAALADGSEYRGCY--GLSVAALMKWHLPRLEVLVDAGADMLALKTIPDIDEAEALV 167
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
L+R AWLS++ + T T G+ ++ A + A +I A+GVNC P V
Sbjct: 168 NLVRRL-ATPAWLSYTI-NGTRTRAGQPLTDAF--AVAAGVPEIVAVGVNCCAPDDVLPA 223
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
+ +H IVYPN G
Sbjct: 224 I-AFAVAHTGKPVIVYPNSG 242
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 142/307 (46%), Gaps = 26/307 (8%)
Query: 265 VKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
V + DG +++ H + D PLWS+ L P A H + R + A
Sbjct: 8 VLISDGGLATELEARGHDLSD----PLWSARLLVDAPHAITAVHTAYFRAGAQIA----- 58
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
T + + G + D R +VE L +A D + + S+ AAS+GP
Sbjct: 59 --TTASYQASFEGFAARGIGHDDATVLLRRSVE-LAQAARDEVGVGGLSV----AASVGP 111
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY G Y ++ A L+ WH P +E LV AG D LAL+TIP EA ALV L
Sbjct: 112 YGAALADGSEYRGCY--GLSVAALMKWHLPRLEVLVDAGADMLALKTIPDIDEAEALVNL 169
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
+R AWLS++ + T T G+ ++ A + A +I A+GVNC P V +
Sbjct: 170 VRRL-ATPAWLSYTI-NGTRTRAGQPLTDAF--AVAAGVPEIVAVGVNCCAPDDVLPAI- 224
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVT 561
+H IVYPN G WD W+ S +W+ G I+GGCC V
Sbjct: 225 AFAVAHTGKPVIVYPNSGEGWDGRRRAWVGPRRFSGSSGQLAREWVAAGARIVGGCCRVR 284
Query: 562 SYEIQQM 568
+I ++
Sbjct: 285 PIDIAEI 291
>gi|21242145|ref|NP_641727.1| homocysteine methyltransferase [Xanthomonas axonopodis pv. citri
str. 306]
gi|21107558|gb|AAM36263.1| homocysteine S-methyltransferase [Xanthomonas axonopodis pv. citri
str. 306]
Length = 321
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 161/333 (48%), Gaps = 30/333 (9%)
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE 300
++ L R + + P Q + + G +LDG+ +++ + D LWS+ L +PE
Sbjct: 1 MTILPRQPRANAPFSQALQH--DGYVVLDGALATELEQRGCDLNDA--LWSARVLMEQPE 56
Query: 301 ACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 360
+ HRD+ + A + T L ++ +D LIA +V ++A
Sbjct: 57 LIYQVHRDYFAAGAQCAITASYQATPL----GFAARGLDVAQAQALIA---RSVALAMQA 109
Query: 361 GVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 420
D+L L + A S+GPYG L DGSEY G YV + + L+ +HRP + AL A
Sbjct: 110 RADHLTLHPHAAPLWVAGSVGPYGAYLADGSEYRGDYVLPIEQ--LMDFHRPRIAALAEA 167
Query: 421 GVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 479
GVD LA ET+P+ E +AL +LL+ EFP AW SF+ +D H S G ++ V + L
Sbjct: 168 GVDLLACETLPSASEIVALRQLLQHEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LD 225
Query: 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-------LD 532
Q+ A+G+NC+ + + + + + +VYPN G +D+ +W L
Sbjct: 226 ACAQVIAVGINCIALDQATAALHSLS-ALTALPLVVYPNSGEHYDASDKRWHAGRGAALT 284
Query: 533 TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
D+++ WL G +IGGCC +I
Sbjct: 285 LADQHA------HWLAAGARLIGGCCRTAPRDI 311
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 130/257 (50%), Gaps = 17/257 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + D LWS+ L +PE + HRD+ AGA ++ YQA
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G +A L+ +SV L A+ + T + + A S+GPYG
Sbjct: 83 LGFAARGLDVAQAQALIARSVALAMQARAD---------HLTLHPHAAPLWVAGSVGPYG 133
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV + + L+ +HRP + AL AGVD LA ET+P+ E +AL +LL+
Sbjct: 134 AYLADGSEYRGDYVLPIEQ--LMDFHRPRIAALAEAGVDLLACETLPSASEIVALRQLLQ 191
Query: 189 -EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP AW SF+ +D H S G ++ V + L Q+ A+G+NC+ + +
Sbjct: 192 HEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LDACAQVIAVGINCIALDQATAALHS 249
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + + +VYPN G
Sbjct: 250 LS-ALTALPLVVYPNSG 265
>gi|448747347|ref|ZP_21729007.1| Homocysteine S-methyltransferase [Halomonas titanicae BH1]
gi|445565039|gb|ELY21152.1| Homocysteine S-methyltransferase [Halomonas titanicae BH1]
Length = 322
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 143/280 (51%), Gaps = 17/280 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG+ +++ D LWS+ L PE + H+ + AGAD ++ YQA V
Sbjct: 18 VIDGALATELEALGCDLNDA--LWSARLLAQAPEKIRQVHQAYFEAGADCAITASYQATV 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G + +EA L+ SV L A+D Q + K AAS+GPYG
Sbjct: 76 PGFMQAGLTAEEARALIQLSVTLAQQARDAVWQPGQTDRPKPL--------VAASVGPYG 127
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y + A L+ +HR E L+ AG D LA ET+P+ +EALA+ LL
Sbjct: 128 AYLADGSEYRGGY--DLDRAGLVEFHRERFELLLAAGADLLAAETLPSLEEALAITDLLA 185
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E PG +AW++FS KD H S G I + LAN + AIGVNC +H+ +L++ I
Sbjct: 186 EHPGAQAWITFSAKDGQHISDGTPIEQCAAA--LANCPGVAAIGVNCTALAHIESLIQAI 243
Query: 249 KQSHPTVQTIVYPNKG--VKLLDGSFTSQVSRHTIKDVDG 286
++ + +VYPN G + ++ HT D+ G
Sbjct: 244 RR-QCDLPILVYPNSGEVYDAVTKTWHPAQCDHTAADISG 282
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 155/312 (49%), Gaps = 27/312 (8%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
++DG+ +++ D LWS+ L PE + H+ + + A + TV
Sbjct: 18 VIDGALATELEALGCDLNDA--LWSARLLAQAPEKIRQVHQAYFEAGADCAITASYQATV 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ----TAASIGP 382
G +T + A + +V L + D A+ +P + + AAS+GP
Sbjct: 76 -------PGFMQAGLTAEEARALIQLSV-TLAQQARD--AVWQPGQTDRPKPLVAASVGP 125
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY G Y + A L+ +HR E L+ AG D LA ET+P+ +EALA+ L
Sbjct: 126 YGAYLADGSEYRGGY--DLDRAGLVEFHRERFELLLAAGADLLAAETLPSLEEALAITDL 183
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
L E PG +AW++FS KD H S G I + LAN + AIGVNC +H+ +L++
Sbjct: 184 LAEHPGAQAWITFSAKDGQHISDGTPIEQCAAA--LANCPGVAAIGVNCTALAHIESLIQ 241
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE------DEYSILHYVPQWLEEGVNIIGG 556
I++ + +VYPN G V+D+V W + D + V QWL G + IGG
Sbjct: 242 AIRR-QCDLPILVYPNSGEVYDAVTKTWHPAQCDHTAADISGLAQGVEQWLAAGASGIGG 300
Query: 557 CCEVTSYEIQQM 568
CC T +IQ +
Sbjct: 301 CCRTTPEDIQAL 312
>gi|336120795|ref|YP_004575581.1| homocysteine S-methyltransferase [Microlunatus phosphovorus NM-1]
gi|334688593|dbj|BAK38178.1| homocysteine S-methyltransferase [Microlunatus phosphovorus NM-1]
Length = 310
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 143/309 (46%), Gaps = 29/309 (9%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G L+DG +++ DV G LWS L PE HR F + A
Sbjct: 15 GPVLMDGGLGTELESSGC-DVTGI-LWSGQLLLDAPEVVEAAHRRFFAAGAQVA------ 66
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSIS----SQTAAS 379
SG Y S + R E ++R V + + + + AAS
Sbjct: 67 ---------ISGSYQLSFEGLAAVGVDRAAAETMLRRSVAVASAAREAAVDPDQTWVAAS 117
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
+GPYG L DGSE+ G Y ++TE L WHRP + L AG D LA+ETIP E AL
Sbjct: 118 VGPYGATLADGSEFRGTYGKTVTE--LQQWHRPRLTVLAEAGADVLAIETIPCLAEVEAL 175
Query: 440 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
++ + + G +WLS +C T T GE ++ A + A+ ++ A+GVNC+ P
Sbjct: 176 LRDI-DGSGVPSWLSLTCASATTTRAGEPVAEAFA--MAADVAEVIAVGVNCLPPGDARD 232
Query: 500 LVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
LV +S +VYPN G WD+VH W D + + WL +G ++GGCC
Sbjct: 233 LVATAARSSGK-PVVVYPNSGEEWDAVHKSWYG--DGSLLAGEIAGWLADGARLVGGCCR 289
Query: 560 VTSYEIQQM 568
V EI+++
Sbjct: 290 VRPAEIEKL 298
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 126/256 (49%), Gaps = 21/256 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
L+DG +++ DV G LWS L PE HR F AGA + S YQ +
Sbjct: 18 LMDGGLGTELESSGC-DVTGI-LWSGQLLLDAPEVVEAAHRRFFAAGAQVAISGSYQLSF 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ L +G A +L +SV + ++A++ PD AAS+GPYG
Sbjct: 76 EGLAAVGVDRAAAETMLRRSVAVASAAREAAVD-PD------------QTWVAASVGPYG 122
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSE+ G Y ++TE L WHRP + L AG D LA+ETIP E AL++ +
Sbjct: 123 ATLADGSEFRGTYGKTVTE--LQQWHRPRLTVLAEAGADVLAIETIPCLAEVEALLRDI- 179
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+ G +WLS +C T T GE ++ A + A+ ++ A+GVNC+ P LV
Sbjct: 180 DGSGVPSWLSLTCASATTTRAGEPVAEAFA--MAADVAEVIAVGVNCLPPGDARDLVATA 237
Query: 249 KQSHPTVQTIVYPNKG 264
+S +VYPN G
Sbjct: 238 ARSSGK-PVVVYPNSG 252
>gi|365906100|ref|ZP_09443859.1| homocysteine methyltransferase [Lactobacillus versmoldensis KCTC
3814]
Length = 316
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 140/260 (53%), Gaps = 17/260 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG+ +++ +H + D D LWS+ L PEA H+ + +AGAD+ ++ YQAN+
Sbjct: 16 VVDGAMATELEKHDV-DTDNE-LWSATALIENPEAITAVHKSYFQAGADVAITNTYQANI 73
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKT---FNLLTGHIETAASIG 125
+ +LG S++ + L+ K+V+L A+ + + N + F L+ G S+
Sbjct: 74 ERFIQLGLSKKASQQLIIKAVKLAQKARTEYFDSLTKNERQKRAEFPLIAG------SVV 127
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY G Y S+ E +HR + L +AGVD A ET P E ALV+
Sbjct: 128 PYGAYLADGSEYRGDYDLSIQEYQ--DFHRSRMSLLDKAGVDLFAFETQPNFAETKALVE 185
Query: 186 LLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
L+R EFP Q AWL+FS KD G + +AV + +Q+ AIGVNC ++
Sbjct: 186 LIRAEFPKQYAWLTFSIKDPLTLCDGTSLQTAVKYFNVF--EQVSAIGVNCTTLENIEET 243
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
V+ I+ + IVYPN G
Sbjct: 244 VKNIR-AVTDKPIIVYPNNG 262
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 148/314 (47%), Gaps = 21/314 (6%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
NK ++DG+ +++ +H + D D LWS+ L PEA H+ + + A +
Sbjct: 11 NKSGLVVDGAMATELEKHDV-DTDNE-LWSATALIENPEAITAVHKSYFQA----GADVA 64
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL-ALIKPSISSQT---- 376
T + + + LI V+ +A +Y +L K +
Sbjct: 65 ITNTYQANIERFIQLGLSKKASQQLII---KAVKLAQKARTEYFDSLTKNERQKRAEFPL 121
Query: 377 -AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
A S+ PYG L DGSEY G Y S+ E +HR + L +AGVD A ET P E
Sbjct: 122 IAGSVVPYGAYLADGSEYRGDYDLSIQEYQ--DFHRSRMSLLDKAGVDLFAFETQPNFAE 179
Query: 436 ALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
ALV+L+R EFP Q AWL+FS KD G + +AV + +Q+ AIGVNC
Sbjct: 180 TKALVELIRAEFPKQYAWLTFSIKDPLTLCDGTSLQTAVKYFNVF--EQVSAIGVNCTTL 237
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554
++ V+ I+ + IVYPN G V+D W + VP+W++ G +I
Sbjct: 238 ENIEETVKNIR-AVTDKPIIVYPNNGDVYDPKTKTWTPNPQADTFADLVPKWVKAGAQLI 296
Query: 555 GGCCEVTSYEIQQM 568
GGCC T +I+Q+
Sbjct: 297 GGCCRTTPTDIKQI 310
>gi|408410453|ref|ZP_11181666.1| Homocysteine S-methyltransferase [Lactobacillus sp. 66c]
gi|408410674|ref|ZP_11181878.1| Homocysteine S-methyltransferase [Lactobacillus sp. 66c]
gi|407875140|emb|CCK83684.1| Homocysteine S-methyltransferase [Lactobacillus sp. 66c]
gi|407875361|emb|CCK83472.1| Homocysteine S-methyltransferase [Lactobacillus sp. 66c]
Length = 312
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 141/267 (52%), Gaps = 20/267 (7%)
Query: 1 MSKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQ 60
+ K+ K +LDGS ++ + + + LW++ L P+ + H D+ +AGA I
Sbjct: 5 LDKLTKPVILDGSMSTPL--EAMGEETSSDLWTAKALVDHPDRVYQVHYDYFKAGARITI 62
Query: 61 SSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIET 120
+ YQAN+ K GYSE EA DL+ KS ++ A+D Q + H
Sbjct: 63 TDSYQANLPAFAKYGYSEDEARDLIKKSAEIAIQARDDYEQATGV-----------HNYV 111
Query: 121 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 180
A S+GPYG L DG+EY G+Y +T + + +H P ++ LV+ GVD LA+ET P +E
Sbjct: 112 AGSVGPYGAYLADGNEYRGNY--HLTPEEYVNFHAPRIDELVQGGVDCLAIETQPKLEEV 169
Query: 181 LALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 239
LA++ +++ +P ++SFS KD S G ++ A + + Q+ A GVNC++
Sbjct: 170 LAILDYVQKTYPALDVYVSFSLKDPQTISEGTSLTEAAQA--VQKYPQVFATGVNCMKLK 227
Query: 240 HVSTLVRCIKQSHPTVQTIVYPNKGVK 266
++ +K+ ++ IVYPN G +
Sbjct: 228 WTVDAIKSLKEVTDSI--IVYPNSGAE 252
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 158/317 (49%), Gaps = 19/317 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDGS ++ + + + LW++ L P+ + H D+ + + Y
Sbjct: 13 ILDGSMSTPL--EAMGEETSSDLWTAKALVDHPDRVYQVHYDYFKAGARITIT-DSYQAN 69
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
L ++Y G+ D DLI + + E ++A DY + + A S+GPYG
Sbjct: 70 LPAFAKY-GYSEDEAR--DLI---KKSAEIAIQARDDYEQAT--GVHNYVAGSVGPYGAY 121
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE- 445
L DG+EY G+Y +T + + +H P ++ LV+ GVD LA+ET P +E LA++ +++
Sbjct: 122 LADGNEYRGNY--HLTPEEYVNFHAPRIDELVQGGVDCLAIETQPKLEEVLAILDYVQKT 179
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 505
+P ++SFS KD S G ++ A + + Q+ A GVNC++ ++ +K
Sbjct: 180 YPALDVYVSFSLKDPQTISEGTSLTEAAQA--VQKYPQVFATGVNCMKLKWTVDAIKSLK 237
Query: 506 QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
+ ++ IVYPN G +D KW+ D P W++ G I+GGCC V +I
Sbjct: 238 EVTDSI--IVYPNSGAEYDPQVKKWVYPPDAPDFGQAGPDWVKAGATIVGGCCTVMPADI 295
Query: 566 QQMRIMI-DEFNTKKND 581
Q++ + E N ++N+
Sbjct: 296 QKLAEAVKKETNQEENN 312
>gi|453051329|gb|EME98838.1| homocysteine methyltransferase [Streptomyces mobaraensis NBRC 13819
= DSM 40847]
Length = 303
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 126/258 (48%), Gaps = 28/258 (10%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG ++Q+ D LWS+ L PE H ++RAGA ++ ++ YQA
Sbjct: 18 VLDGGLSNQLQAQGCDLSDA--LWSARLLADGPEQIERAHAAYVRAGARVLITAGYQATF 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ + G +E LL +SV L A + + + AAS+GPYG
Sbjct: 76 EGFARRGVGREETAGLLRRSVALARRAAAEGER---------------EVWVAASVGPYG 120
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
+L DGSEY G Y + A+L +HRP +E L AG D LALET+P E AL++ +R
Sbjct: 121 AMLADGSEYRGRY--GLGVAELERFHRPRIEVLAEAGPDVLALETVPDADEGRALLRAVR 178
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
G WLS+SC T G+ ++ A L A DQ+ A+GVNC P V VR
Sbjct: 179 GC-GVPVWLSYSCAGG-RTRAGQPLAEAFA--LAAGNDQVVAVGVNCCEPGEVEDAVRVA 234
Query: 249 KQ--SHPTVQTIVYPNKG 264
+ P V VYPN G
Sbjct: 235 ARVTGKPVV---VYPNSG 249
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 134/304 (44%), Gaps = 28/304 (9%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG ++Q+ D LWS+ L PE H ++R + G T
Sbjct: 18 VLDGGLSNQLQAQGCDLSDA--LWSARLLADGPEQIERAHAAYVRAGARVLITAGYQAT- 74
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+ G + + R +V AL R A + AAS+GPYG +
Sbjct: 75 ------FEGFARRGVGREETAGLLRRSV-ALAR-----RAAAEGEREVWVAASVGPYGAM 122
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y + A+L +HRP +E L AG D LALET+P E AL++ +R
Sbjct: 123 LADGSEYRGRY--GLGVAELERFHRPRIEVLAEAGPDVLALETVPDADEGRALLRAVRGC 180
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
G WLS+SC T G+ ++ A L A DQ+ A+GVNC P V VR +
Sbjct: 181 -GVPVWLSYSCAGG-RTRAGQPLAEAFA--LAAGNDQVVAVGVNCCEPGEVEDAVRVAAR 236
Query: 507 --SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYE 564
P V VYPN G WD +W + W+ G ++GGCC V
Sbjct: 237 VTGKPVV---VYPNSGEGWDDEARRWRGRPAFDA--GRADAWVAAGARLVGGCCCVGPER 291
Query: 565 IQQM 568
I ++
Sbjct: 292 IAEL 295
>gi|294665003|ref|ZP_06730312.1| homocysteine methyltransferase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292605222|gb|EFF48564.1| homocysteine methyltransferase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 321
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 30/333 (9%)
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE 300
++ L R + + P Q + + G +LDG+ +++ + D LWS+ L +PE
Sbjct: 1 MTILPRQPRPNAPFSQALQH--DGYVVLDGALATELEQRGCDLNDA--LWSARVLMEQPE 56
Query: 301 ACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 360
+ HRD+ + A + T L ++ +D LIA +V V+A
Sbjct: 57 LIYQVHRDYFAAGAQCAITASYQATPL----GFAARGLDVAQAQALIA---RSVALAVQA 109
Query: 361 GVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 420
D+L L + A S+GPYG L DGSEY G YV + + L+ +HRP + AL A
Sbjct: 110 RADHLTLHPHAAPLWVAGSVGPYGAYLADGSEYRGDYVLPIEQ--LMDFHRPRIAALAEA 167
Query: 421 GVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 479
GVD LA ET+P+ E +AL +LL+ +FP AW SF+ +D H S G ++ V + L
Sbjct: 168 GVDLLACETLPSVSEIVALRQLLQHDFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LD 225
Query: 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-------LD 532
Q+ A+GVNC+ + + + + + +VYPN G +D+ +W L
Sbjct: 226 ACAQVIAVGVNCIALDQATAALHSLS-ALTALPLVVYPNSGEHYDASDKRWHAGRGAALT 284
Query: 533 TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
D+++ WL G +IGGCC +I
Sbjct: 285 LADQHA------HWLAAGARLIGGCCRTAPRDI 311
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 130/257 (50%), Gaps = 17/257 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + D LWS+ L +PE + HRD+ AGA ++ YQA
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G +A L+ +SV L A+ + T + + A S+GPYG
Sbjct: 83 LGFAARGLDVAQAQALIARSVALAVQARAD---------HLTLHPHAAPLWVAGSVGPYG 133
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV + + L+ +HRP + AL AGVD LA ET+P+ E +AL +LL+
Sbjct: 134 AYLADGSEYRGDYVLPIEQ--LMDFHRPRIAALAEAGVDLLACETLPSVSEIVALRQLLQ 191
Query: 189 -EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
+FP AW SF+ +D H S G ++ V + L Q+ A+GVNC+ + +
Sbjct: 192 HDFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LDACAQVIAVGVNCIALDQATAALHS 249
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + + +VYPN G
Sbjct: 250 LS-ALTALPLVVYPNSG 265
>gi|395769093|ref|ZP_10449608.1| homocysteine methyltransferase [Streptomyces acidiscabies 84-104]
Length = 323
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/260 (36%), Positives = 134/260 (51%), Gaps = 15/260 (5%)
Query: 9 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG ++Q+ + H + D LWS+ L PEA + H + AGAD+ +S YQA
Sbjct: 20 VLDGGMSNQLESAGHDLSD----ELWSARLLAEVPEAITQAHLAYFLAGADVAITSSYQA 75
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG--HIETAASI 124
+ K G + A +LL +SV+L A + + T + AASI
Sbjct: 76 TYEGFAKRGIERERASELLVQSVELAREAARRAQAADALGTRPGAGTGTAPRPLYVAASI 135
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG +L DGSEY G Y +T +L A+HRP +E L A D LALET+P EA AL+
Sbjct: 136 GPYGAMLADGSEYRGRY--GLTVPELAAFHRPRIETLAAAAPDVLALETVPDTDEAKALL 193
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
+++R G AWLS+S + D T G+ + A L A+ D+I A+GVNC P +
Sbjct: 194 EVVRGL-GTPAWLSYSVEGD-RTRAGQPLEEAF--ALAADVDEIIAVGVNCCAPGDATRA 249
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
V I +VYPN G
Sbjct: 250 VE-IAARVTGKPVVVYPNSG 268
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 100/192 (52%), Gaps = 9/192 (4%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
AASIGPYG +L DGSEY G Y +T +L A+HRP +E L A D LALET+P EA
Sbjct: 132 AASIGPYGAMLADGSEYRGRY--GLTVPELAAFHRPRIETLAAAAPDVLALETVPDTDEA 189
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
AL++++R G AWLS+S + D T G+ + A L A+ D+I A+GVNC P
Sbjct: 190 KALLEVVRGL-GTPAWLSYSVEGD-RTRAGQPLEEAF--ALAADVDEIIAVGVNCCAPGD 245
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556
+ V I +VYPN G WD+ W T V W G +IGG
Sbjct: 246 ATRAVE-IAARVTGKPVVVYPNSGEGWDANARTW--TGSSSFAPEEVEGWSAAGARLIGG 302
Query: 557 CCEVTSYEIQQM 568
CC V I +
Sbjct: 303 CCRVGPEAIASI 314
>gi|452823158|gb|EME30171.1| homocysteine S-methyltransferase [Galdieria sulphuraria]
Length = 310
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 138/262 (52%), Gaps = 21/262 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG +++ R D+ LWS+ L PE + H ++ AGA+II SS YQA+
Sbjct: 6 LLDGGLATELERKGF-DLSIGKLWSARLLDECPELIEQVHLSYLEAGANIITSSSYQASF 64
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK-ENQTPDINLNKTFNLLTGHIETAASIGPY 127
D + GYS EA +L+ +SVQL A+ +N +P AAS GPY
Sbjct: 65 DGFLEEGYSLSEAKELMIRSVQLCKRARSTFQNFSPS----------ATDCYVAASCGPY 114
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y +++ L+++H +E LV D++A ETIP +EA A+++L+
Sbjct: 115 GAYLADGSEYRGCY--GVSKERLLSFHSSRLEVLVAQDPDFIAFETIPDIEEAQAIIELM 172
Query: 188 -REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
R++ W+S C+++T + G I + V L + AIGVNCV P ++S+L+
Sbjct: 173 TRKYFYIPFWISIQCRNETEMACGTSIETIVP--FLCSTTNCFAIGVNCVPPQYISSLIS 230
Query: 247 CIKQS----HPTVQTIVYPNKG 264
I+ + I YPN G
Sbjct: 231 IIRNQLLRLSLSTFIIAYPNSG 252
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 151/311 (48%), Gaps = 18/311 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
LLDG +++ R D+ LWS+ L PE + H ++ S +
Sbjct: 6 LLDGGLATELERKGF-DLSIGKLWSARLLDECPELIEQVHLSYLEAGANIITSSSYQASF 64
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
DG G+ S++EA + +V+ RA + + AAS GPYG
Sbjct: 65 --DGFLEEGY---SLSEAKELMIR--SVQLCKRARSTFQNFSPSATDCYVAASCGPYGAY 117
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-RE 445
L DGSEY G Y +++ L+++H +E LV D++A ETIP +EA A+++L+ R+
Sbjct: 118 LADGSEYRGCY--GVSKERLLSFHSSRLEVLVAQDPDFIAFETIPDIEEAQAIIELMTRK 175
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 505
+ W+S C+++T + G I + V L + AIGVNCV P ++S+L+ I+
Sbjct: 176 YFYIPFWISIQCRNETEMACGTSIETIVP--FLCSTTNCFAIGVNCVPPQYISSLISIIR 233
Query: 506 QS----HPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVT 561
+ I YPN G V++ + W + E + SI +V L+ +++GGCC T
Sbjct: 234 NQLLRLSLSTFIIAYPNSGEVYNPLKKDW-NQEMKNSIQSWVDYMLDCDADVVGGCCRTT 292
Query: 562 SYEIQQMRIMI 572
IQ ++ I
Sbjct: 293 PLHIQLLKNQI 303
>gi|322385238|ref|ZP_08058885.1| homocysteine S-methyltransferase [Streptococcus cristatus ATCC
51100]
gi|417921927|ref|ZP_12565417.1| homocysteine S-methyltransferase [Streptococcus cristatus ATCC
51100]
gi|321270862|gb|EFX53775.1| homocysteine S-methyltransferase [Streptococcus cristatus ATCC
51100]
gi|342833812|gb|EGU68092.1| homocysteine S-methyltransferase [Streptococcus cristatus ATCC
51100]
Length = 314
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 143/263 (54%), Gaps = 19/263 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ +LDG+ +++ R DV G LWS+ YL P+ H D++RA +DII +S YQ
Sbjct: 12 EIIILDGALGTELERQGY-DVSGR-LWSAKYLLENPQIIQGLHEDYVRASSDIITTSSYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDIN-LNKTFNLLTGHIETAASI 124
A++ + G S +A +L ++V L +A Q ++ +++ L+ G S+
Sbjct: 70 ASIPAFVEEGLSLDKAYELFKETVFLAQAAVKNVWQGLSLDEQQRSYPLIAG------SV 123
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPY L DGSEY+G Y ++E + +HRP ++AL+ AG D LALETIP E ALV
Sbjct: 124 GPYAAYLADGSEYTGAY--HLSEEEFKDFHRPRIQALLDAGCDLLALETIPNGAETEALV 181
Query: 185 KLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
LL EFP +A+LSF+ + + S G LI L + Q+ A+G NC P ++
Sbjct: 182 HLLSEEFPQVEAYLSFTAQTVSAISDGTLIEE--VGRLAQSSPQVLAVGFNCTAPHLIAP 239
Query: 244 LVRCIKQ--SHPTVQTIVYPNKG 264
L+ +KQ P + YPN G
Sbjct: 240 LLEKLKQVCDKP---LLAYPNSG 259
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 155/312 (49%), Gaps = 24/312 (7%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIG 321
+ +LDG+ +++ R DV G LWS+ YL P+ H D++R I T++
Sbjct: 13 IIILDGALGTELERQGY-DVSGR-LWSAKYLLENPQIIQGLHEDYVRASSDIITTSSYQA 70
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSIS-SQTAASI 380
+ +G Y + E +A +A V+ L+L + S A S+
Sbjct: 71 SIPAFVEEGLSLDKAY-ELFKETVFLA------QAAVKNVWQGLSLDEQQRSYPLIAGSV 123
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GPY L DGSEY+G Y ++E + +HRP ++AL+ AG D LALETIP E ALV
Sbjct: 124 GPYAAYLADGSEYTGAY--HLSEEEFKDFHRPRIQALLDAGCDLLALETIPNGAETEALV 181
Query: 441 KLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
LL EFP +A+LSF+ + + S G LI L + Q+ A+G NC P ++
Sbjct: 182 HLLSEEFPQVEAYLSFTAQTVSAISDGTLIEE--VGRLAQSSPQVLAVGFNCTAPHLIAP 239
Query: 500 LVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDT-EDEYSILHYVPQWLEEGVNIIGG 556
L+ +KQ P + YPN G +++ V W D E + + Y W ++GV + GG
Sbjct: 240 LLEKLKQVCDKP---LLAYPNSGEIYNGVTNTWQDNPEQQLCLTDYSHLWKKQGVQLFGG 296
Query: 557 CCEVTSYEIQQM 568
CC +I+++
Sbjct: 297 CCRTRPEDIRRL 308
>gi|443304838|ref|ZP_21034626.1| homocysteine methyltransferase [Mycobacterium sp. H4Y]
gi|442766402|gb|ELR84396.1| homocysteine methyltransferase [Mycobacterium sp. H4Y]
Length = 309
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 128/260 (49%), Gaps = 25/260 (9%)
Query: 9 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
LLDG +++ H + D LWS+ L P V H + RAGA I ++ YQA
Sbjct: 15 LLDGGLATELEARGHDLSDR----LWSARLLADAPREIVAVHAAYFRAGATIATTASYQA 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G +E LL +SV+L +A+D+ G + AAS+GP
Sbjct: 71 SFEGFAARGLDRRETDGLLRRSVELAKAARDEAGPGE-----------FGGLLVAASVGP 119
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y ++ L WHRP +E L AG D LA ET+P EA ALV +
Sbjct: 120 YGAALADGSEYRGRY--GLSVGALARWHRPRLETLADAGADVLACETVPDVDEAEALVDV 177
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R G AWLS++ D T G+ ++ A + A D+I A+GVNC P V +
Sbjct: 178 VRSV-GMPAWLSYTI-DGARTRAGQPLTEAFA--VAAGVDEIVAVGVNCCAPDDVLPAIA 233
Query: 247 CIKQSHPTVQTIVYPNKGVK 266
+ V IVYPN G +
Sbjct: 234 SASEIGKPV--IVYPNSGER 251
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 145/326 (44%), Gaps = 39/326 (11%)
Query: 264 GVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
G LLDG +++ H + D LWS+ L P V H + R T A+
Sbjct: 12 GTVLLDGGLATELEARGHDLSDR----LWSARLLADAPREIVAVHAAYFRAG-ATIATTA 66
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD------YLALIKPSISSQ 375
Y + + G + + R +VE L +A D + L+
Sbjct: 67 SYQ------ASFEGFAARGLDRRETDGLLRRSVE-LAKAARDEAGPGEFGGLL------- 112
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
AAS+GPYG L DGSEY G Y ++ L WHRP +E L AG D LA ET+P E
Sbjct: 113 VAASVGPYGAALADGSEYRGRY--GLSVGALARWHRPRLETLADAGADVLACETVPDVDE 170
Query: 436 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
A ALV ++R G AWLS++ D T G+ ++ A + A D+I A+GVNC P
Sbjct: 171 AEALVDVVRSV-GMPAWLSYTI-DGARTRAGQPLTEAFA--VAAGVDEIVAVGVNCCAPD 226
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
V + + V IVYPN G WD W+ + L QW+ G I+G
Sbjct: 227 DVLPAIASASEIGKPV--IVYPNSGERWDG--RAWVGPRTFATGL--AAQWVSAGARIVG 280
Query: 556 GCCEVTSYEIQQMRIMIDEFNTKKND 581
GCC V +I ++ + N K +
Sbjct: 281 GCCRVGPVDIAELAPLRRACNQKSAE 306
>gi|357488709|ref|XP_003614642.1| Homocysteine s-methyltransferase [Medicago truncatula]
gi|355515977|gb|AES97600.1| Homocysteine s-methyltransferase [Medicago truncatula]
Length = 326
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 153/328 (46%), Gaps = 36/328 (10%)
Query: 255 VQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHI 314
+Q ++ + G + DG F +Q+ +H D PLWS++ L +P + H +++
Sbjct: 9 LQDLIENSGGCVVTDGGFATQLEKHGAFIND--PLWSAICLIKQPHLIKKVHMEYLEAGA 66
Query: 315 ET------AASIGPY---GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL 365
+ A+I + G + +G V EA W A G Y
Sbjct: 67 DILVTSSYQATIPGFLSKGLSIEEGESLLQRSVKLAVEARDSFWS----SAKRNPGNKYR 122
Query: 366 ALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL 425
+ AASIG YG L DGSEY G Y ++ L +HR ++ LV AG D L
Sbjct: 123 RAL-------VAASIGSYGAYLADGSEYRGLYGPDVSLVKLKDFHRRRLQVLVEAGPDLL 175
Query: 426 ALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCL--LANPD 482
A ETIP + EA A V+LL E Q +W+ F+ D + GE + CL + +
Sbjct: 176 AFETIPNKLEAQACVELLEEINVQIPSWICFTSVDGENAPSGE----SFQYCLEVINKSN 231
Query: 483 QIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDT----EDEYS 538
+++A+G+NC P + +L+ KQ +VYPN G VWD + KWL + +D++
Sbjct: 232 KVEAVGINCAPPHFMESLIPKFKQ-LTNKAIVVYPNSGEVWDGIAKKWLPSKCFHDDDFG 290
Query: 539 ILHYVPQWLEEGVNIIGGCCEVTSYEIQ 566
Y +W E G IIGGCC T IQ
Sbjct: 291 F--YATRWRELGAKIIGGCCRTTPSTIQ 316
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 132/257 (51%), Gaps = 14/257 (5%)
Query: 11 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDN 70
DG F +Q+ +H D PLWS++ L +P + H +++ AGADI+ +S YQA +
Sbjct: 23 DGGFATQLEKHGAFIND--PLWSAICLIKQPHLIKKVHMEYLEAGADILVTSSYQATIPG 80
Query: 71 LTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
G S +E LL +SV+L A+D + N + AASIG YG
Sbjct: 81 FLSKGLSIEEGESLLQRSVKLAVEARDSFWSSAKRNPGNKYR----RALVAASIGSYGAY 136
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 190
L DGSEY G Y ++ L +HR ++ LV AG D LA ETIP + EA A V+LL E
Sbjct: 137 LADGSEYRGLYGPDVSLVKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLEEI 196
Query: 191 PGQ-KAWLSFSCKDDTHTSHGELISSAVTSCL--LANPDQIQAIGVNCVRPSHVSTLVRC 247
Q +W+ F+ D + GE + CL + ++++A+G+NC P + +L+
Sbjct: 197 NVQIPSWICFTSVDGENAPSGE----SFQYCLEVINKSNKVEAVGINCAPPHFMESLIPK 252
Query: 248 IKQSHPTVQTIVYPNKG 264
KQ +VYPN G
Sbjct: 253 FKQ-LTNKAIVVYPNSG 268
>gi|326494804|dbj|BAJ94521.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527989|dbj|BAJ89046.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 325
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 154/332 (46%), Gaps = 22/332 (6%)
Query: 254 TVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH 313
V+ +V G ++DG F +Q+ D++ PLWS+ L T+P E H ++
Sbjct: 5 VVEELVKKAGGCAVIDGGFATQLEALG-ADIN-DPLWSAACLITKPHLIKEVHMQYLEAG 62
Query: 314 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY----LALIK 369
+ S T+ G + + R +V+ + A ++ L K
Sbjct: 63 ADVIISSSYQATI-------PGFLARGLLLEEAEGLLRTSVQLALEARDEFWKSTLRKSK 115
Query: 370 PSIS-SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE 428
P + + AAS+G YG L DGSEYSG Y D +T L +HR ++ L AG D +A E
Sbjct: 116 PVYNRALVAASVGSYGAYLADGSEYSGSYGDDVTAEKLKDFHRRRLQVLASAGPDLIAFE 175
Query: 429 TIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
IP + EA ALV+LL E Q +W+ FS D H GE + +L D++ +
Sbjct: 176 AIPNKMEAQALVELLEEEDIQVPSWICFSSVDGKHLCSGESFGDCLE--ILNASDKVAIV 233
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTI-VYPNKGGVWDSVHMKWLDTE--DEYSILHYVP 544
GVNC P V ++R K+ T + I VYPN G VWD +WL E S
Sbjct: 234 GVNCTPPQFVEGIIRDFKKQ--TEKAIAVYPNSGEVWDGRAKRWLPVECFGRKSFDAMAR 291
Query: 545 QWLEEGVNIIGGCCEVTSYEIQQMRIMIDEFN 576
+W E G +++GGCC T I+ + + N
Sbjct: 292 RWQEAGASLVGGCCRTTPSTIRAVSKALKSRN 323
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/258 (37%), Positives = 134/258 (51%), Gaps = 12/258 (4%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG F +Q+ D++ PLWS+ L T+P E H ++ AGAD+I SS YQA +
Sbjct: 18 VIDGGFATQLEALG-ADIN-DPLWSAACLITKPHLIKEVHMQYLEAGADVIISSSYQATI 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G +EA LL SVQL A+D+ ++ +N AAS+G YG
Sbjct: 76 PGFLARGLLLEEAEGLLRTSVQLALEARDEFWKSTLRKSKPVYN----RALVAASVGSYG 131
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEYSG Y D +T L +HR ++ L AG D +A E IP + EA ALV+LL
Sbjct: 132 AYLADGSEYSGSYGDDVTAEKLKDFHRRRLQVLASAGPDLIAFEAIPNKMEAQALVELLE 191
Query: 189 EFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
E Q +W+ FS D H GE + +L D++ +GVNC P V ++R
Sbjct: 192 EEDIQVPSWICFSSVDGKHLCSGESFGDCLE--ILNASDKVAIVGVNCTPPQFVEGIIRD 249
Query: 248 IKQSHPTVQTI-VYPNKG 264
K+ T + I VYPN G
Sbjct: 250 FKKQ--TEKAIAVYPNSG 265
>gi|332639105|ref|ZP_08417968.1| homocysteine methyltransferase [Weissella cibaria KACC 11862]
Length = 318
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 144/286 (50%), Gaps = 12/286 (4%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + I LWS+ L P+A ++ H + +AGAD+ ++ YQANV
Sbjct: 16 VLDGAMATELEKRGI--ATNTTLWSATALRDNPQAIIDVHTSYFKAGADVAITNSYQANV 73
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
GY+ EA +++ S L + K ++ ++ N H SIGPYG
Sbjct: 74 PAFEAAGYTTDEAEEMITASATL--AIKARQAYYDGLSNNDRLR-RAAHPLVIGSIGPYG 130
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY+G Y +++ +HR ++ L AGVD A ET P E ALV LL+
Sbjct: 131 AYLADGSEYTGKY--DLSQTAFKDFHRRRMQLLDAAGVDGFAFETQPKFAEVQALVDLLQ 188
Query: 189 -EFPGQKAWLSFSCKDDTHTS-HGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
EFP Q AW+SFS D+ G +S AV + + DQI AIG+NC +++ V
Sbjct: 189 TEFPTQHAWISFSINDNGRELWDGTPLSEAVQA--FNDVDQISAIGINCTAMENIADAVA 246
Query: 247 CIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSS 292
IK+ + I+YPN G + T Q + H + PLW +
Sbjct: 247 LIKE-YTDKPIIIYPNNGDIYDPATKTWQENEHAASFTNLVPLWQA 291
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 148/311 (47%), Gaps = 16/311 (5%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
G +LDG+ +++ + I LWS+ L P+A ++ H + + + A +
Sbjct: 12 NGHLVLDGAMATELEKRGI--ATNTTLWSATALRDNPQAIIDVHTSYFKAGADVAITNSY 69
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA---LIKPSISSQTAAS 379
V E +G+ D E +I +A D L+ ++ + S
Sbjct: 70 QANV--PAFEAAGYTTDEAEE--MITASATLAIKARQAYYDGLSNNDRLRRAAHPLVIGS 125
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
IGPYG L DGSEY+G Y +++ +HR ++ L AGVD A ET P E AL
Sbjct: 126 IGPYGAYLADGSEYTGKY--DLSQTAFKDFHRRRMQLLDAAGVDGFAFETQPKFAEVQAL 183
Query: 440 VKLLR-EFPGQKAWLSFSCKDDTHTS-HGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
V LL+ EFP Q AW+SFS D+ G +S AV + + DQI AIG+NC ++
Sbjct: 184 VDLLQTEFPTQHAWISFSINDNGRELWDGTPLSEAVQA--FNDVDQISAIGINCTAMENI 241
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
+ V IK+ + I+YPN G ++D W + E S + VP W G IIGGC
Sbjct: 242 ADAVALIKE-YTDKPIIIYPNNGDIYDPATKTWQENEHAASFTNLVPLWQANGAAIIGGC 300
Query: 558 CEVTSYEIQQM 568
C T +I ++
Sbjct: 301 CRTTPADIAEI 311
>gi|350565947|ref|ZP_08934666.1| homocysteine S-methyltransferase [Peptoniphilus indolicus ATCC
29427]
gi|348663265|gb|EGY79859.1| homocysteine S-methyltransferase [Peptoniphilus indolicus ATCC
29427]
Length = 317
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 142/263 (53%), Gaps = 26/263 (9%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K+ +LDG+ +++ R K+++ LWS+ L + EA + H ++ AG DII +S YQ
Sbjct: 13 KILVLDGALATELERAG-KNIN-DSLWSTKILIEDSEAIKKVHLSYLEAGCDIILTSSYQ 70
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIET----A 121
+ L K GY++ EA++++ KS ++ N AK++ LL +E
Sbjct: 71 TTIKGLMKRGYTKDEAIEIIKKSFRIANEAKEE-------------YLLKNSVEVEPIIG 117
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
ASIGPYG L DGSEY+G+Y + ++++ +H ++ L GV+ A ETIP+ +EAL
Sbjct: 118 ASIGPYGAFLSDGSEYTGNY--EVLDSEMRDFHYEKIKILKDEGVELFACETIPSFREAL 175
Query: 182 ALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 241
+ K+ E + ++SFS KD+ S G I + N ++ IG+NC P +
Sbjct: 176 VIQKICEELEVE-YYISFSAKDEYSISDGTSIRECAGNL---NGKYLKGIGINCTAPEFL 231
Query: 242 STLVRCIKQSHPTVQTIVYPNKG 264
+L+R IK + +VYPN G
Sbjct: 232 ESLIREIKSVYNG-NIVVYPNSG 253
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 151/306 (49%), Gaps = 18/306 (5%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
K + +LDG+ +++ R K+++ LWS+ L + EA + H ++ + +
Sbjct: 12 KKILVLDGALATELERAG-KNIN-DSLWSTKILIEDSEAIKKVHLSYLEAGCDIILT-SS 68
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
Y T ++ G G+ D E ++ N A +YL + ASIGP
Sbjct: 69 YQTTIK-GLMKRGYTKDEAIEIIKKSFRIAN-----EAKEEYLLKNSVEVEPIIGASIGP 122
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY+G+Y + ++++ +H ++ L GV+ A ETIP+ +EAL + K+
Sbjct: 123 YGAFLSDGSEYTGNY--EVLDSEMRDFHYEKIKILKDEGVELFACETIPSFREALVIQKI 180
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
E + ++SFS KD+ S G I + N ++ IG+NC P + +L+R
Sbjct: 181 CEELEVE-YYISFSAKDEYSISDGTSIRECAGNL---NGKYLKGIGINCTAPEFLESLIR 236
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTS 562
IK + +VYPN G ++D V W + + + W+ G NIIGGCC+ T
Sbjct: 237 EIKSVYNG-NIVVYPNSGEIFDPVSKTW--SGNGQCVFDLAENWIRAGANIIGGCCKTTP 293
Query: 563 YEIQQM 568
+I+++
Sbjct: 294 QDIKKL 299
>gi|419707482|ref|ZP_14234966.1| Homocysteine S-methyltransferase (S-methylmethionine)
[Streptococcus salivarius PS4]
gi|383282828|gb|EIC80808.1| Homocysteine S-methyltransferase (S-methylmethionine)
[Streptococcus salivarius PS4]
Length = 322
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 140/249 (56%), Gaps = 16/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
D+ G LWS+ YL +PE E H ++ AGAD+I +S YQA + L + G +E+EA +
Sbjct: 36 DISGK-LWSAKYLLEKPEVIQEIHETYVAAGADLITTSSYQATLPGLMESGLTEREAEQI 94
Query: 85 LHKSVQLMNSAKDKENQTPD--INLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV 142
+ +VQL +A+DK T D + + L++G +GPY L +GSEYSG Y
Sbjct: 95 IALTVQLAKAARDKVWVTLDETEKAKRPYPLISG------DVGPYAAYLANGSEYSGDY- 147
Query: 143 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-REFPGQKAWLSFSC 201
+T L +HRP ++ L+ GVD LALETIP EA AL++LL EFP +A++SF+
Sbjct: 148 GQITVETLKDFHRPRIQILLDQGVDLLALETIPNHLEAQALIELLAEEFPDVEAYISFTI 207
Query: 202 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 261
+ S G +S + L++ QI A+G+NC P + +K++ + I YP
Sbjct: 208 QVPDAISDGTSLSD--IAKLVSQSSQILAVGINCSSPILYEQALPVLKKAGKAL--ITYP 263
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 264 NSG-EVYDG 271
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 155/327 (47%), Gaps = 31/327 (9%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAA 318
NK +L G+ +++ D+ G LWS+ YL +PE E H ++ I T++
Sbjct: 16 NKSPLILHGALGTEMEALGY-DISGK-LWSAKYLLEKPEVIQEIHETYVAAGADLITTSS 73
Query: 319 SIGPYGTVLRDG-SEYSGHYVDSMTEADLIAWHRPNV----EALVRAGVDYLALIKPSIS 373
++ G +E + ++T L R V + +A Y P IS
Sbjct: 74 YQATLPGLMESGLTEREAEQIIALT-VQLAKAARDKVWVTLDETEKAKRPY-----PLIS 127
Query: 374 SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
+GPY L +GSEYSG Y +T L +HRP ++ L+ GVD LALETIP
Sbjct: 128 ----GDVGPYAAYLANGSEYSGDY-GQITVETLKDFHRPRIQILLDQGVDLLALETIPNH 182
Query: 434 KEALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 492
EA AL++LL EFP +A++SF+ + S G +S + L++ QI A+G+NC
Sbjct: 183 LEAQALIELLAEEFPDVEAYISFTIQVPDAISDGTSLSD--IAKLVSQSSQILAVGINCS 240
Query: 493 RPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE-DEYSILHYVPQW-LEEG 550
P + +K++ + I YPN G V+D W + D ++L + W G
Sbjct: 241 SPILYEQALPVLKKAGKAL--ITYPNSGEVYDGDSQTWKPKDKDALTLLEHSKDWHAHFG 298
Query: 551 VNIIGGCCEVTSYEIQQMRIMIDEFNT 577
V I+GGCC +I + + EF T
Sbjct: 299 VQILGGCCRTRPNDI---KALYQEFRT 322
>gi|119962403|ref|YP_948790.1| homocysteine methyltransferase [Arthrobacter aurescens TC1]
gi|119949262|gb|ABM08173.1| homocysteine S-methyltransferase [Arthrobacter aurescens TC1]
Length = 317
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 132/256 (51%), Gaps = 17/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ H D PLWS+ L +P + HRD+ AGA + ++ YQA
Sbjct: 18 VLDGALATELEAHGCDLED--PLWSAKVLLEQPHLIKQVHRDYFDAGASVAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G +E+L+L+ SV+L + A+ + N G + A S+GPYG
Sbjct: 76 QGFARRGLGAEESLELVALSVRLADEARREALADGTAN---------GPLLVAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y +++ A+ +HRP + ALV G D+LA ET+P+ EA ALV L+
Sbjct: 127 AYLADGSEYRGDY--TLSAAEFRDFHRPRIAALVETGADFLACETLPSYAEAEALVALVA 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EF ++W +F+ +D H S G I + LL+ ++ A+GVNCV P + T
Sbjct: 185 EF-DVESWFTFTLRDSGHISDGTPIGD--VAVLLSAEPRVTAVGVNCV-PLELVTDALGT 240
Query: 249 KQSHPTVQTIVYPNKG 264
+ YPN G
Sbjct: 241 LHRFSNKPLVAYPNSG 256
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 147/311 (47%), Gaps = 30/311 (9%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG----P 322
+LDG+ +++ H D PLWS+ L +P + HRD+ A + P
Sbjct: 18 VLDGALATELEAHGCDLED--PLWSAKVLLEQPHLIKQVHRDYFDAGASVAITASYQATP 75
Query: 323 YGTVLRD-GSEYSGHYVD-SMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASI 380
G R G+E S V S+ AD EAL + L+ A S+
Sbjct: 76 QGFARRGLGAEESLELVALSVRLAD-----EARREALADGTANGPLLV--------AGSV 122
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GPYG L DGSEY G Y +++ A+ +HRP + ALV G D+LA ET+P+ EA ALV
Sbjct: 123 GPYGAYLADGSEYRGDY--TLSAAEFRDFHRPRIAALVETGADFLACETLPSYAEAEALV 180
Query: 441 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 500
L+ EF ++W +F+ +D H S G I + LL+ ++ A+GVNCV P + T
Sbjct: 181 ALVAEF-DVESWFTFTLRDSGHISDGTPIGD--VAVLLSAEPRVTAVGVNCV-PLELVTD 236
Query: 501 VRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDT---EDEYSILHYVPQWLEEGVNIIGGC 557
+ YPN G +D+V W + + ++ P W + G +IGGC
Sbjct: 237 ALGTLHRFSNKPLVAYPNSGESYDAVTKTWAPSAGVQGSGTLAGNAPDWQDRGARLIGGC 296
Query: 558 CEVTSYEIQQM 568
C T +I+ +
Sbjct: 297 CRTTPRDIEGL 307
>gi|387761727|ref|YP_006068704.1| homocysteine S-methyltransferase 1 [Streptococcus salivarius 57.I]
gi|339292494|gb|AEJ53841.1| homocysteine S-methyltransferase 1 [Streptococcus salivarius 57.I]
Length = 316
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/250 (36%), Positives = 140/250 (56%), Gaps = 16/250 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
D+ G LWS+ YL +PE + H ++ AG+D+I +S YQA + L G +++EA +
Sbjct: 30 DISGK-LWSAKYLLEKPEVIQKIHETYVAAGSDLITTSSYQATLPGLIDAGLTKEEAEQI 88
Query: 85 LHKSVQLMNSAKDKENQTPD--INLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV 142
+ +VQL A+DK T D + + L++G +GPY L +GSEY+G Y
Sbjct: 89 IALTVQLAKDARDKVWATLDETEKAKRPYPLISG------DVGPYAAYLANGSEYTGDY- 141
Query: 143 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-REFPGQKAWLSFSC 201
+T +L +HRP ++ L+ GVD LALETIP EA AL++LL EFP +A++SF+
Sbjct: 142 GQITIKELKEFHRPRIQILLDQGVDLLALETIPNRLEAQALIELLAEEFPEAEAYISFTV 201
Query: 202 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 261
++ S G + + L+ DQI A+G+NC P + + +K + + I YP
Sbjct: 202 QEPGTISDGTSLDE--IAQLVGQSDQILALGINCSSPLLYNQALAILKNAGKAL--ITYP 257
Query: 262 NKGVKLLDGS 271
N G ++ DGS
Sbjct: 258 NSG-EVYDGS 266
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 155/333 (46%), Gaps = 43/333 (12%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
NK +L G+ +++ D+ G LWS+ YL +PE + H ++
Sbjct: 10 NKSPLILHGALGTEMESLGY-DISGK-LWSAKYLLEKPEVIQKIHETYVAA--------- 58
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL-----------VRAGVDYLALIK- 369
G+ L S Y + + +A L + AL V A +D K
Sbjct: 59 --GSDLITTSSYQAT-LPGLIDAGLTKEEAEQIIALTVQLAKDARDKVWATLDETEKAKR 115
Query: 370 --PSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
P IS +GPY L +GSEY+G Y +T +L +HRP ++ L+ GVD LAL
Sbjct: 116 PYPLIS----GDVGPYAAYLANGSEYTGDY-GQITIKELKEFHRPRIQILLDQGVDLLAL 170
Query: 428 ETIPAEKEALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQA 486
ETIP EA AL++LL EFP +A++SF+ ++ S G + + L+ DQI A
Sbjct: 171 ETIPNRLEAQALIELLAEEFPEAEAYISFTVQEPGTISDGTSLDE--IAQLVGQSDQILA 228
Query: 487 IGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE-DEYSILHYVPQ 545
+G+NC P + + +K + + I YPN G V+D W + D +++ +
Sbjct: 229 LGINCSSPLLYNQALAILKNAGKAL--ITYPNSGEVYDGSTQTWKPKDKDALTLVEHSKD 286
Query: 546 W-LEEGVNIIGGCCEVTSYEIQQMRIMIDEFNT 577
W + GV I+GGCC +I + + EF T
Sbjct: 287 WHTQFGVKILGGCCRTRPNDI---KALYAEFRT 316
>gi|255567526|ref|XP_002524742.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
[Ricinus communis]
gi|223535926|gb|EEF37585.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
[Ricinus communis]
Length = 343
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/268 (36%), Positives = 138/268 (51%), Gaps = 20/268 (7%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V ++DG +++ RH D PLWS+ L T P H D++ AGADII ++ YQA
Sbjct: 23 VAVIDGGLATELERHGADLND--PLWSAKCLLTSPHLIRMVHLDYLEAGADIIITASYQA 80
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAK----DKENQTPDINLNKTFNLLTGHIETAA 122
+ G+S E+ LL KSV++ A+ DK + N L I AA
Sbjct: 81 TIQGFEAKGFSSAESEALLKKSVEIACEAREVYHDKCLAGACDDNNDGRVLKKRPILVAA 140
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
S+G YG L DGSEYSG Y +++T L +HR V+ L AG D +A ET+P EA A
Sbjct: 141 SVGSYGAYLADGSEYSGDYGEAVTLGTLKDFHRRRVQVLAEAGADLIAFETVPNRVEAQA 200
Query: 183 LVKLLREFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVNCVRP 238
+LL E + AW SF+ KD + G+ + +S SC ++ A+G+NC P
Sbjct: 201 YAELLEEEDIKVPAWFSFNSKDGINVVSGDSLLECASIAESC-----RKVIAVGINCTPP 255
Query: 239 SHVSTLVRCIKQ--SHPTVQTIVYPNKG 264
S + L+ IK+ S P ++YPN G
Sbjct: 256 SFIHGLILSIKKVTSKP---ILIYPNSG 280
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 158/326 (48%), Gaps = 38/326 (11%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
GV ++DG +++ RH D PLWS+ L T P H D++ + +
Sbjct: 22 GVAVIDGGLATELERHGADLND--PLWSAKCLLTSPHLIRMVHLDYLEAGADIIITASYQ 79
Query: 324 GTVLRDGSEYSGHYVDSMTEADL-----IA------WHRPNVEALVRAGVDYLALIKPSI 372
T+ G E G + + +EA L IA +H + D L K I
Sbjct: 80 ATI--QGFEAKG-FSSAESEALLKKSVEIACEAREVYHDKCLAGACDDNNDGRVLKKRPI 136
Query: 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA 432
AAS+G YG L DGSEYSG Y +++T L +HR V+ L AG D +A ET+P
Sbjct: 137 --LVAASVGSYGAYLADGSEYSGDYGEAVTLGTLKDFHRRRVQVLAEAGADLIAFETVPN 194
Query: 433 EKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIG 488
EA A +LL E + AW SF+ KD + G+ + +S SC ++ A+G
Sbjct: 195 RVEAQAYAELLEEEDIKVPAWFSFNSKDGINVVSGDSLLECASIAESC-----RKVIAVG 249
Query: 489 VNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLD----TEDEYSILHY 542
+NC PS + L+ IK+ S P ++YPN G +D+ +W+ T++++ + Y
Sbjct: 250 INCTPPSFIHGLILSIKKVTSKP---ILIYPNSGESYDADRKEWVQNTGVTDEDF--VSY 304
Query: 543 VPQWLEEGVNIIGGCCEVTSYEIQQM 568
V +W E G +++GGCC T I+ +
Sbjct: 305 VNKWCEVGASLVGGCCRTTPNTIRAI 330
>gi|357120326|ref|XP_003561878.1| PREDICTED: homocysteine S-methyltransferase 1-like [Brachypodium
distachyon]
Length = 369
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 133/258 (51%), Gaps = 12/258 (4%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG F +Q+ D++ LWS+ L T+P E H ++ AGAD+I SS YQA +
Sbjct: 17 VIDGGFATQLEALG-ADIN-DSLWSAACLITKPHLIKEVHMQYLEAGADVIISSSYQATI 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G ++EA LL SV L A+D+ ++ +N AASIG YG
Sbjct: 75 PGFLARGLRQEEAEGLLRTSVHLALEARDEFWKSTLTKPKPIYN----RALVAASIGSYG 130
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEYSG Y D++ L +HR ++ L AG D +A E IP + EA ALV+LL
Sbjct: 131 AFLADGSEYSGSYGDNIMAEKLKDFHRRRLQVLASAGPDLIAFEAIPNKMEAQALVELLE 190
Query: 189 EFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
E Q +W+ FS D H GE + +L +++ +GVNC P + ++R
Sbjct: 191 EEDIQVPSWICFSSVDGKHLCSGESFGDCLQ--ILNASEKVAIVGVNCTPPQFIEGIIRE 248
Query: 248 IKQSHPTVQTI-VYPNKG 264
K+ T + I VYPN G
Sbjct: 249 FKKQ--TGKAIAVYPNSG 264
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 149/322 (46%), Gaps = 22/322 (6%)
Query: 254 TVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH 313
V+ +V G ++DG F +Q+ D++ LWS+ L T+P E H ++
Sbjct: 4 VVEELVKKAGGCAVIDGGFATQLEALG-ADIN-DSLWSAACLITKPHLIKEVHMQYLEAG 61
Query: 314 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL--ALIKPS 371
+ S T+ G + + + R +V + A ++ L KP
Sbjct: 62 ADVIISSSYQATI-------PGFLARGLRQEEAEGLLRTSVHLALEARDEFWKSTLTKPK 114
Query: 372 I---SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE 428
+ AASIG YG L DGSEYSG Y D++ L +HR ++ L AG D +A E
Sbjct: 115 PIYNRALVAASIGSYGAFLADGSEYSGSYGDNIMAEKLKDFHRRRLQVLASAGPDLIAFE 174
Query: 429 TIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
IP + EA ALV+LL E Q +W+ FS D H GE + +L +++ +
Sbjct: 175 AIPNKMEAQALVELLEEEDIQVPSWICFSSVDGKHLCSGESFGDCLQ--ILNASEKVAIV 232
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTI-VYPNKGGVWDSVHMKWLDTE--DEYSILHYVP 544
GVNC P + ++R K+ T + I VYPN G VWD +WL E S
Sbjct: 233 GVNCTPPQFIEGIIREFKKQ--TGKAIAVYPNSGEVWDGRAKRWLPAECFGRKSFDVMAR 290
Query: 545 QWLEEGVNIIGGCCEVTSYEIQ 566
+W E G ++IGGCC T I+
Sbjct: 291 RWQEAGASLIGGCCRTTPSTIR 312
>gi|429114310|ref|ZP_19175228.1| Homocysteine S-methyltransferase [Cronobacter sakazakii 701]
gi|449309313|ref|YP_007441669.1| homocysteine methyltransferase [Cronobacter sakazakii SP291]
gi|426317439|emb|CCK01341.1| Homocysteine S-methyltransferase [Cronobacter sakazakii 701]
gi|449099346|gb|AGE87380.1| homocysteine methyltransferase [Cronobacter sakazakii SP291]
Length = 310
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 148/303 (48%), Gaps = 15/303 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D LWS+ L +PE H D+ R + A + T
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+G + EA A +VE +A DY + A S+GPYG
Sbjct: 76 -------AGFAARGLDEAQSRALIARSVELARQARDDYYHEQPDAGPLLVAGSVGPYGAY 128
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y +++ A+ +HRP VEAL+ AGVD LA ET+P+ EALAL LL +
Sbjct: 129 LADGSEYRGDY--ALSAAEFADFHRPRVEALLEAGVDLLACETLPSLPEALALAALLESY 186
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P +AW +F+ +D H S G + + LA QI A+G+NCV + + + +
Sbjct: 187 PQARAWFTFTLRDSDHISDGTPLGDVAAA--LAPYPQIVALGINCVALEKTTAALARLHE 244
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
+ + +VYPN G +D+V W D ++ HY+ +W G +IGGCC T +I
Sbjct: 245 AT-RLPLVVYPNSGEQYDAVSKTWRHDGHACQTLAHYLGEWRAAGAALIGGCCRTTPADI 303
Query: 566 QQM 568
+
Sbjct: 304 AAL 306
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 142/280 (50%), Gaps = 26/280 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L +PE H D+ RAGA ++ YQA
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKE-NQTPDINLNKTFNLLTGHIETAASIGPY 127
G E ++ L+ +SV+L A+D ++ PD G + A S+GPY
Sbjct: 76 AGFAARGLDEAQSRALIARSVELARQARDDYYHEQPD----------AGPLLVAGSVGPY 125
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y +++ A+ +HRP VEAL+ AGVD LA ET+P+ EALAL LL
Sbjct: 126 GAYLADGSEYRGDY--ALSAAEFADFHRPRVEALLEAGVDLLACETLPSLPEALALAALL 183
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
+P +AW +F+ +D H S G + + LA QI A+G+NCV + +
Sbjct: 184 ESYPQARAWFTFTLRDSDHISDGTPLGDVAAA--LAPYPQIVALGINCVALEKTTAALAR 241
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGH 287
+ ++ + +VYPN G + S+ RH DGH
Sbjct: 242 LHEAT-RLPLVVYPNSGEQY---DAVSKTWRH-----DGH 272
>gi|403528269|ref|YP_006663156.1| homocysteine S-methyltransferase [Arthrobacter sp. Rue61a]
gi|403230696|gb|AFR30118.1| homocysteine S-methyltransferase [Arthrobacter sp. Rue61a]
Length = 317
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 133/259 (51%), Gaps = 17/259 (6%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K +LDG+ +++ H D PLWS+ L +P + HRD+ AGA + ++ YQ
Sbjct: 15 KDLVLDGALATELEAHGCDLED--PLWSAKVLLEQPHLIKQVHRDYFDAGASVAITASYQ 72
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
A G +E+L+L+ SV+L + A+ + N G + A S+G
Sbjct: 73 ATPQGFAWRGLGAEESLELVALSVRLADEARREALADGTAN---------GPLLVAGSVG 123
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY G Y +++ A+ +HRP + ALV AG D+LA ET+P+ EA ALV
Sbjct: 124 PYGAYLADGSEYRGDY--TLSAAEFRDFHRPRIAALVEAGADFLACETLPSYAEAEALVA 181
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
L+ EF ++W +F+ +D H S G I + LL+ ++ A+GVNCV P + T
Sbjct: 182 LVAEF-DVESWFTFTLRDSGHISDGTPIGD--VAVLLSAEPRVTAVGVNCV-PLELVTDA 237
Query: 246 RCIKQSHPTVQTIVYPNKG 264
+ YPN G
Sbjct: 238 LGTLHRFSNKPLVAYPNSG 256
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 148/311 (47%), Gaps = 30/311 (9%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG----P 322
+LDG+ +++ H D PLWS+ L +P + HRD+ A + P
Sbjct: 18 VLDGALATELEAHGCDLED--PLWSAKVLLEQPHLIKQVHRDYFDAGASVAITASYQATP 75
Query: 323 YGTVLRD-GSEYSGHYVD-SMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASI 380
G R G+E S V S+ AD EAL + L+ A S+
Sbjct: 76 QGFAWRGLGAEESLELVALSVRLAD-----EARREALADGTANGPLLV--------AGSV 122
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GPYG L DGSEY G Y +++ A+ +HRP + ALV AG D+LA ET+P+ EA ALV
Sbjct: 123 GPYGAYLADGSEYRGDY--TLSAAEFRDFHRPRIAALVEAGADFLACETLPSYAEAEALV 180
Query: 441 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 500
L+ EF ++W +F+ +D H S G I + LL+ ++ A+GVNCV P + T
Sbjct: 181 ALVAEF-DVESWFTFTLRDSGHISDGTPIGD--VAVLLSAEPRVTAVGVNCV-PLELVTD 236
Query: 501 VRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDT---EDEYSILHYVPQWLEEGVNIIGGC 557
+ YPN G +D+V W + + ++ P W + G +IGGC
Sbjct: 237 ALGTLHRFSNKPLVAYPNSGESYDAVTKTWAPSAGVQGSGTLAGNAPDWQDRGARLIGGC 296
Query: 558 CEVTSYEIQQM 568
C T +I+ +
Sbjct: 297 CRTTPRDIEGL 307
>gi|453089962|gb|EMF18002.1| homocysteine methyltransferase [Mycosphaerella populorum SO2202]
Length = 343
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/260 (37%), Positives = 137/260 (52%), Gaps = 20/260 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG+ +++ D++ HPLWS+ L +P + H D+ AGA I ++ YQA
Sbjct: 18 IIDGALATELEARG-HDLN-HPLWSAKLLQEDPTSIENVHYDYFAAGAYIAITASYQAAT 75
Query: 69 DNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPY 127
LTK L SE + L+ +SV++ A+ K T + N+ + A S+GPY
Sbjct: 76 AGLTKHLDISEADGKQLIQRSVEVAQQARTKAYSTV-VGRNRP-------LLVAGSVGPY 127
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY+G Y +T + +HRP + AL+ AGVD LALETIP E AL+KLL
Sbjct: 128 GAYLSDGSEYTGQY--QLTMEQFMDFHRPRIAALIDAGVDLLALETIPNMNEIQALLKLL 185
Query: 188 -REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
EFP AWLS + +D H + G V + + QI A G+NCV V+ +
Sbjct: 186 ATEFPTATAWLSCTLQDTEHLADGTTWQE-VLKTVQEHETQILAFGINCVPAVSVTATLS 244
Query: 247 CIKQSHP--TVQTIVYPNKG 264
I HP T+ I YPN G
Sbjct: 245 KI---HPLTTLPLIAYPNSG 261
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 150/333 (45%), Gaps = 44/333 (13%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
++DG+ +++ D++ HPLWS+ L +P + H D+ A I +
Sbjct: 18 IIDGALATELEARG-HDLN-HPLWSAKLLQEDPTSIENVHYDYFAA----GAYIAITASY 71
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD-YLALIKPSISSQTAASIGPYGT 385
+ + H ++EAD + +VE +A Y ++ + A S+GPYG
Sbjct: 72 QAATAGLTKHL--DISEADGKQLIQRSVEVAQQARTKAYSTVVGRNRPLLVAGSVGPYGA 129
Query: 386 VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-R 444
L DGSEY+G Y +T + +HRP + AL+ AGVD LALETIP E AL+KLL
Sbjct: 130 YLSDGSEYTGQY--QLTMEQFMDFHRPRIAALIDAGVDLLALETIPNMNEIQALLKLLAT 187
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 504
EFP AWLS + +D H + G V + + QI A G+NCV V+ + I
Sbjct: 188 EFPTATAWLSCTLQDTEHLADGTTWQE-VLKTVQEHETQILAFGINCVPAVSVTATLSKI 246
Query: 505 KQSHP--TVQTIVYPNKGGVWDSVHMKWLDTEDE-------------------------- 536
HP T+ I YPN G WD+V W T E
Sbjct: 247 ---HPLTTLPLIAYPNSGETWDAVSKTWHGTRAEDILHHHHTHAVHTEKEEEEEERDAAL 303
Query: 537 YSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMR 569
++ + +W G +IGGCC ++ +R
Sbjct: 304 KNLSTELEEWSVHGARLIGGCCRTGPSYVRAVR 336
>gi|224107975|ref|XP_002314674.1| homocysteine s-methyltransferase [Populus trichocarpa]
gi|222863714|gb|EEF00845.1| homocysteine s-methyltransferase [Populus trichocarpa]
Length = 338
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 143/276 (51%), Gaps = 25/276 (9%)
Query: 1 MSKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQ 60
+ K ++DG +++ RH D PLWS+ L + P H D++ AGA+II
Sbjct: 18 LKKCGGYAVVDGGLATELERHGADLND--PLWSAKCLISSPHLVRRVHLDYLDAGANIIL 75
Query: 61 SSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGH 117
S+ YQA + G S +EA LL +SV++ A++ ++ + ++ N+
Sbjct: 76 SASYQATIQGFVAKGLSVEEAESLLRRSVEIACEAREIYYDKSTKGSWDYIESGNISRRP 135
Query: 118 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 177
+ AASIG YG L DGSEYSG Y D+++ L +HR ++ L+++G D +A ETIP
Sbjct: 136 VLVAASIGSYGAYLADGSEYSGKYGDAVSLETLKDFHRRRLQVLLKSGADLIACETIPNR 195
Query: 178 KEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQA 230
EA A +LL E P AW SF+ KD + G+ I +S SC Q+ A
Sbjct: 196 LEAKAYAELLEEEGINIP---AWFSFNSKDGINVVSGDSILECASIADSC-----KQVVA 247
Query: 231 IGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKG 264
+G+NC P + LV I++ S P V +YPN G
Sbjct: 248 VGINCTPPRFIHGLVLSIRKATSKPIV---IYPNSG 280
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 155/335 (46%), Gaps = 57/335 (17%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDF-------------- 309
G ++DG +++ RH D PLWS+ L + P H D+
Sbjct: 23 GYAVVDGGLATELERHGADLND--PLWSAKCLISSPHLVRRVHLDYLDAGANIILSASYQ 80
Query: 310 --IRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
I+G + S+ ++LR V+ EA I + + + DY+
Sbjct: 81 ATIQGFVAKGLSVEEAESLLR-------RSVEIACEAREIYYDKS-----TKGSWDYIE- 127
Query: 368 IKPSISSQ---TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY 424
+IS + AASIG YG L DGSEYSG Y D+++ L +HR ++ L+++G D
Sbjct: 128 -SGNISRRPVLVAASIGSYGAYLADGSEYSGKYGDAVSLETLKDFHRRRLQVLLKSGADL 186
Query: 425 LALETIPAEKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELI---SSAVTSCL 477
+A ETIP EA A +LL E P AW SF+ KD + G+ I +S SC
Sbjct: 187 IACETIPNRLEAKAYAELLEEEGINIP---AWFSFNSKDGINVVSGDSILECASIADSC- 242
Query: 478 LANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTED 535
Q+ A+G+NC P + LV I++ S P V +YPN G +++ +W +
Sbjct: 243 ----KQVVAVGINCTPPRFIHGLVLSIRKATSKPIV---IYPNSGETYNAELKQWTKSSG 295
Query: 536 --EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+ + Y+ +W E G ++ GGCC T I+ +
Sbjct: 296 VVDEDFVSYINKWREAGASLFGGCCRTTPNTIRAI 330
>gi|195940986|ref|ZP_03086368.1| homocysteine methyltransferase [Escherichia coli O157:H7 str.
EC4024]
Length = 261
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 124/236 (52%), Gaps = 6/236 (2%)
Query: 334 SGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEY 393
+G + EA A +VE +A YLA + + A S+GPYG L DGSEY
Sbjct: 27 AGFAARGLDEAQSRALIGKSVELARKAREAYLAENAQAGTLLVAGSVGPYGAYLADGSEY 86
Query: 394 SGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWL 453
G Y E +HRP VEAL+ AG D LA ET+P+ E AL LL +P +AW
Sbjct: 87 RGDYERRAEE--FTEFHRPRVEALLDAGADLLACETLPSFPEIKALAALLTAYPRARAWF 144
Query: 454 SFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQT 513
SF+ +D H S G + V+ +L N Q+ A+G+NC+ + + + + S ++
Sbjct: 145 SFTLRDSEHLSDGTPLRDVVS--VLENYPQVVALGINCIALENTTAALTHL-HSLTSLPL 201
Query: 514 IVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+VYPN G +D+V W E ++ Y+PQWLE G +IGGCC T +I ++
Sbjct: 202 VVYPNSGEHYDAVSKTWHHHGEACETLAGYLPQWLEAGAKLIGGCCRTTPKDIAEL 257
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 112/219 (51%), Gaps = 14/219 (6%)
Query: 46 ETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDI 105
+ H D+ RAGA + ++ YQA G E ++ L+ KSV+L A++
Sbjct: 4 DVHLDYYRAGAQVAITASYQATPAGFAARGLDEAQSRALIGKSVELARKAREAYLAE--- 60
Query: 106 NLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG 165
N G + A S+GPYG L DGSEY G Y E +HRP VEAL+ AG
Sbjct: 61 ------NAQAGTLLVAGSVGPYGAYLADGSEYRGDYERRAEE--FTEFHRPRVEALLDAG 112
Query: 166 VDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP 225
D LA ET+P+ E AL LL +P +AW SF+ +D H S G + V+ +L N
Sbjct: 113 ADLLACETLPSFPEIKALAALLTAYPRARAWFSFTLRDSEHLSDGTPLRDVVS--VLENY 170
Query: 226 DQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
Q+ A+G+NC+ + + + + S ++ +VYPN G
Sbjct: 171 PQVVALGINCIALENTTAALTHL-HSLTSLPLVVYPNSG 208
>gi|322372513|ref|ZP_08047049.1| homocysteine S-methyltransferase [Streptococcus sp. C150]
gi|321277555|gb|EFX54624.1| homocysteine S-methyltransferase [Streptococcus sp. C150]
Length = 322
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 140/249 (56%), Gaps = 16/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
D+ G LWS+ YL +PE E H ++ AGAD+I +S YQA + L + G +E+EA +
Sbjct: 36 DISGK-LWSAKYLLEKPEVIQEIHETYVAAGADLITTSSYQATLPGLMEAGLTEREAEQI 94
Query: 85 LHKSVQLMNSAKDKENQTPD--INLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV 142
+ +VQL +A+DK T D + + L++G +GPY L +GSEY+G Y
Sbjct: 95 IALTVQLAKAARDKVWATLDETEKAKRPYPLISG------DVGPYAAYLANGSEYTGDY- 147
Query: 143 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-REFPGQKAWLSFSC 201
+T L +HRP ++ L+ GVD LALETIP EA ALV+LL EFP +A++SF+
Sbjct: 148 GQVTVETLKDFHRPRIQILLDQGVDLLALETIPNHLEAQALVELLAEEFPEVEAYISFTI 207
Query: 202 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 261
+ S G + + L++ +QI A+G+NC P + +K++ + I YP
Sbjct: 208 QVPDAISDGTSLDE--MAKLVSQSNQILAVGINCSSPILYEQALPVLKKAGKAL--ITYP 263
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 264 NSG-EVYDG 271
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 156/327 (47%), Gaps = 31/327 (9%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAA 318
NK +L G+ +++ D+ G LWS+ YL +PE E H ++ I T++
Sbjct: 16 NKFPLILHGALGTEMEALGY-DISGK-LWSAKYLLEKPEVIQEIHETYVAAGADLITTSS 73
Query: 319 SIGPYGTVLRDG-SEYSGHYVDSMTEADLIAWHRPNVEALV----RAGVDYLALIKPSIS 373
++ G +E + ++T L R V A + +A Y P IS
Sbjct: 74 YQATLPGLMEAGLTEREAEQIIALT-VQLAKAARDKVWATLDETEKAKRPY-----PLIS 127
Query: 374 SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
+GPY L +GSEY+G Y +T L +HRP ++ L+ GVD LALETIP
Sbjct: 128 ----GDVGPYAAYLANGSEYTGDY-GQVTVETLKDFHRPRIQILLDQGVDLLALETIPNH 182
Query: 434 KEALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 492
EA ALV+LL EFP +A++SF+ + S G + + L++ +QI A+G+NC
Sbjct: 183 LEAQALVELLAEEFPEVEAYISFTIQVPDAISDGTSLDE--MAKLVSQSNQILAVGINCS 240
Query: 493 RPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE-DEYSILHYVPQW-LEEG 550
P + +K++ + I YPN G V+D W + D ++L + W G
Sbjct: 241 SPILYEQALPVLKKAGKAL--ITYPNSGEVYDGDSQTWKPKDKDALTLLEHSKDWHAHFG 298
Query: 551 VNIIGGCCEVTSYEIQQMRIMIDEFNT 577
V I+GGCC +I + + EF T
Sbjct: 299 VQILGGCCRTRPNDI---KALYQEFRT 322
>gi|421451947|ref|ZP_15901308.1| Homocysteine S-methyltransferase [Streptococcus salivarius K12]
gi|400182378|gb|EJO16640.1| Homocysteine S-methyltransferase [Streptococcus salivarius K12]
Length = 322
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 139/250 (55%), Gaps = 16/250 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
D+ G LWS+ YL +PE + H ++ AG+D+I +S YQA + L G +E+EA +
Sbjct: 36 DISGK-LWSAKYLLDKPEVIQKIHETYVAAGSDLITTSSYQATLPGLIDAGLTEKEAEQI 94
Query: 85 LHKSVQLMNSAKDKENQTPD--INLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV 142
+ +VQL +A+DK D + + L++G +GPY L +GSEYSG Y
Sbjct: 95 IALTVQLAKAARDKVWGALDETEKAKRPYPLISG------DVGPYAAYLANGSEYSGDYG 148
Query: 143 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-REFPGQKAWLSFSC 201
TEA L +HRP ++ L+ GVD LALETIP EA AL +LL EFP + ++SF+
Sbjct: 149 QITTEA-LKEFHRPRIQILLNQGVDLLALETIPNRLEAQALNELLAEEFPEAEVYISFTV 207
Query: 202 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 261
++ S G + + L++ DQI A+G+NC P + + +K + + I YP
Sbjct: 208 QEPGTISDGTSLDE--IAQLVSQSDQILALGINCSSPLLYNQALAILKNTGKAL--ITYP 263
Query: 262 NKGVKLLDGS 271
N G ++ DGS
Sbjct: 264 NSG-EVYDGS 272
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 157/329 (47%), Gaps = 35/329 (10%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
NK +L G+ +++ D+ G LWS+ YL +PE + H ++
Sbjct: 16 NKSPLILHGALGTEMESLGY-DISGK-LWSAKYLLDKPEVIQKIHETYVAA--------- 64
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL----VRAGVDYL--ALIKPSISSQ 375
G+ L S Y + + +A L + AL +A D + AL + + +
Sbjct: 65 --GSDLITTSSYQAT-LPGLIDAGLTEKEAEQIIALTVQLAKAARDKVWGALDETEKAKR 121
Query: 376 ----TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
+ +GPY L +GSEYSG Y TEA L +HRP ++ L+ GVD LALETIP
Sbjct: 122 PYPLISGDVGPYAAYLANGSEYSGDYGQITTEA-LKEFHRPRIQILLNQGVDLLALETIP 180
Query: 432 AEKEALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490
EA AL +LL EFP + ++SF+ ++ S G + + L++ DQI A+G+N
Sbjct: 181 NRLEAQALNELLAEEFPEAEVYISFTVQEPGTISDGTSLDE--IAQLVSQSDQILALGIN 238
Query: 491 CVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE-DEYSILHYVPQWLEE 549
C P + + +K + + I YPN G V+D W + D +++ + W ++
Sbjct: 239 CSSPLLYNQALAILKNTGKAL--ITYPNSGEVYDGSTQTWKPKDKDALTLVEHSKDWHDQ 296
Query: 550 -GVNIIGGCCEVTSYEIQQMRIMIDEFNT 577
GV I+GGCC +I + + EF T
Sbjct: 297 FGVKILGGCCRTRPNDI---KALYAEFRT 322
>gi|254774531|ref|ZP_05216047.1| homocysteine methyltransferase [Mycobacterium avium subsp. avium
ATCC 25291]
Length = 291
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 131/258 (50%), Gaps = 29/258 (11%)
Query: 9 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
LLDG +++ H + D PLWS+ L P+ H + RAGA I ++ YQA
Sbjct: 2 LLDGGLATELEARGHDLSD----PLWSARLLADAPQEIGAVHAAYFRAGAMIATTASYQA 57
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G S + LL +SV+L +A+D+ + G++ AAS+GP
Sbjct: 58 SFEGFAARGISRSDTAGLLRRSVELAKAARDEAG-------------VAGYV--AASVGP 102
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y S+ + L WHRP +E L A D LA+ETIP EA ALV L
Sbjct: 103 YGAALADGSEYRGRYGLSVRQ--LEDWHRPRLEVLADADADVLAVETIPDVDEAEALVNL 160
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R G AWLS++ D HT G+ ++ A + A +I A+GVNC P V +
Sbjct: 161 VRSL-GVPAWLSYTI-DGAHTRAGQPLADAFA--VAAGVPEIVAVGVNCCAPDDVLPAIG 216
Query: 247 CIKQSHPTVQTIVYPNKG 264
+ V IVYPN G
Sbjct: 217 PARAVGKPV--IVYPNSG 232
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 144/307 (46%), Gaps = 35/307 (11%)
Query: 267 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH--IETAASIGP 322
LLDG +++ H + D PLWS+ L P+ H + R I T AS
Sbjct: 2 LLDGGLATELEARGHDLSD----PLWSARLLADAPQEIGAVHAAYFRAGAMIATTASYQ- 56
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
+ + G ++ +D R +VE L +A D + ++ AAS+GP
Sbjct: 57 --------ASFEGFAARGISRSDTAGLLRRSVE-LAKAARD-----EAGVAGYVAASVGP 102
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY G Y S+ + L WHRP +E L A D LA+ETIP EA ALV L
Sbjct: 103 YGAALADGSEYRGRYGLSVRQ--LEDWHRPRLEVLADADADVLAVETIPDVDEAEALVNL 160
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
+R G AWLS++ D HT G+ ++ A + A +I A+GVNC P V +
Sbjct: 161 VRSL-GVPAWLSYTI-DGAHTRAGQPLADAFA--VAAGVPEIVAVGVNCCAPDDVLPAIG 216
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTS 562
+ V IVYPN G WD + ++S QW+ G I+GGCC V
Sbjct: 217 PARAVGKPV--IVYPNSGEHWDG---RVWTGRSKFSA-ELASQWISAGARIVGGCCRVRP 270
Query: 563 YEIQQMR 569
+I +R
Sbjct: 271 TDIAAVR 277
>gi|417089877|ref|ZP_11955769.1| homocysteine S-methyltransferase [Streptococcus suis R61]
gi|353533818|gb|EHC03458.1| homocysteine S-methyltransferase [Streptococcus suis R61]
Length = 315
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 143/250 (57%), Gaps = 15/250 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P+ + H+D+IRAGAD++ +S YQA + L ++G S+ EA +L
Sbjct: 30 DVSGK-LWSAKYLLENPQLIKDIHKDYIRAGADLVTTSTYQATFEGLAEVGLSQAEAEEL 88
Query: 85 LHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV 142
+ +V L A+++ + + +T+ L++G +GPY L +G+EY+G Y
Sbjct: 89 IRLTVDLAKEAREEVWVALSEAEKVQRTYPLISG------DVGPYAAYLANGAEYTGDYG 142
Query: 143 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE-FPGQKAWLSFSC 201
+ E +L A+HR +E L+ G + LALETIP EA ALV+LL E FP +A++SF+
Sbjct: 143 NISLE-ELKAFHRRRMELLLEQGAELLALETIPNVLEAQALVELLAEDFPEAEAYISFTS 201
Query: 202 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 261
+D S G I + L+ + +QI A+G+NC PS + +++ + YP
Sbjct: 202 QDGQSISDGTSIEK--IAELVNSSEQILAVGLNCTAPSLYPAFLSQLREKTDK-PFVTYP 258
Query: 262 NKGVKLLDGS 271
N G ++ DG+
Sbjct: 259 NSG-EVYDGA 267
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 155/322 (48%), Gaps = 36/322 (11%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
N+ +L G+ +++ DV G LWS+ YL P+ + H+D+IR
Sbjct: 10 NQEFVILHGALGTELEFRGY-DVSGK-LWSAKYLLENPQLIKDIHKDYIRA--------- 58
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD---------YLALIKPSI 372
G L S Y + + + E L + E L+R VD ++AL +
Sbjct: 59 --GADLVTTSTYQATF-EGLAEVGL---SQAEAEELIRLTVDLAKEAREEVWVALSEAEK 112
Query: 373 SSQT----AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE 428
+T + +GPY L +G+EY+G Y + E +L A+HR +E L+ G + LALE
Sbjct: 113 VQRTYPLISGDVGPYAAYLANGAEYTGDYGNISLE-ELKAFHRRRMELLLEQGAELLALE 171
Query: 429 TIPAEKEALALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
TIP EA ALV+LL E FP +A++SF+ +D S G I + L+ + +QI A+
Sbjct: 172 TIPNVLEAQALVELLAEDFPEAEAYISFTSQDGQSISDGTSIEK--IAELVNSSEQILAV 229
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLD-TEDEYSILHYVPQW 546
G+NC PS + +++ + YPN G V+D W + +D +S+L W
Sbjct: 230 GLNCTAPSLYPAFLSQLREKTDK-PFVTYPNSGEVYDGATQTWKEKADDSHSLLDNTLVW 288
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
+ G ++GGCC +I +
Sbjct: 289 HKLGAKVVGGCCRTRPADIADL 310
>gi|329296708|ref|ZP_08254044.1| homocysteine methyltransferase [Plautia stali symbiont]
Length = 291
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 139/299 (46%), Gaps = 33/299 (11%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D LWS+ L PE + H D+
Sbjct: 17 ILDGALATELEARGCNLADT--LWSAKVLMENPELIYQVHYDY----------------- 57
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
++ +DS + LI R +V RA DY A A S+GPYG
Sbjct: 58 ------FAARGLDSGQASALI---RQSVALAQRARDDYRAASGSEAPLLVAGSVGPYGAY 108
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L +G+EY G Y ++ ++ +HRP V AL+ AGVD L ET+P+ E AL+ LL EF
Sbjct: 109 LANGAEYRGDY--ALPAVEMKDFHRPRVAALLEAGVDLLTCETLPSFGEIQALISLLAEF 166
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P AW SF+ +D H S G +S ++ Q+ A+G+NCV V+ ++ + Q
Sbjct: 167 PHSSAWFSFTLRDAQHLSDGTPLSKVAE--VINAAQQVVAVGLNCVALESVTPALQTL-Q 223
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
+ +VYPN G +D+V W ++ P+W + G +IGGCC T +I
Sbjct: 224 ALTDKPLLVYPNSGEQYDAVSKSWHSAPSGCTLHDKFPEWQQAGARLIGGCCRTTPQDI 282
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 118/256 (46%), Gaps = 35/256 (13%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L PE + H D+ A
Sbjct: 17 ILDGALATELEARGCNLADT--LWSAKVLMENPELIYQVHYDYFAA-------------- 60
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G +A L+ +SV L A+D + + + A S+GPYG
Sbjct: 61 -----RGLDSGQASALIRQSVALAQRARDD---------YRAASGSEAPLLVAGSVGPYG 106
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L +G+EY G Y ++ ++ +HRP V AL+ AGVD L ET+P+ E AL+ LL
Sbjct: 107 AYLANGAEYRGDY--ALPAVEMKDFHRPRVAALLEAGVDLLTCETLPSFGEIQALISLLA 164
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP AW SF+ +D H S G +S ++ Q+ A+G+NCV V+ ++ +
Sbjct: 165 EFPHSSAWFSFTLRDAQHLSDGTPLSKVAE--VINAAQQVVAVGLNCVALESVTPALQTL 222
Query: 249 KQSHPTVQTIVYPNKG 264
Q+ +VYPN G
Sbjct: 223 -QALTDKPLLVYPNSG 237
>gi|401682974|ref|ZP_10814863.1| homocysteine S-methyltransferase [Streptococcus sp. AS14]
gi|422823652|ref|ZP_16871840.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK405]
gi|422826276|ref|ZP_16874455.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK678]
gi|422855586|ref|ZP_16902244.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1]
gi|422865561|ref|ZP_16912186.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1058]
gi|324992979|gb|EGC24899.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK405]
gi|324995712|gb|EGC27624.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK678]
gi|327462275|gb|EGF08602.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1]
gi|327489628|gb|EGF21420.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1058]
gi|400183656|gb|EJO17907.1| homocysteine S-methyltransferase [Streptococcus sp. AS14]
Length = 315
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 143/264 (54%), Gaps = 20/264 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ +LDG+ +++ DV G LWS+ YL +P+ + H ++RAG+DII +S YQ
Sbjct: 12 EIIILDGALGTELESLGY-DVSGK-LWSAQYLLDQPQIIQDVHESYVRAGSDIITTSSYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAAS 123
A++ + G + ++ +LL ++V L A + +P+ + + L+ G S
Sbjct: 70 ASIPAFIEAGLTPEKGYNLLKETVFLAQKAIENVWTGLSPEEQKQRPYPLVAG------S 123
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPY L DGSEY+G Y ++E + +HRP ++AL+ AG D LA+ETIP EA A+
Sbjct: 124 VGPYAAYLADGSEYTGDY--QLSEEEFRDFHRPRIQALLEAGSDLLAIETIPNGAEAAAI 181
Query: 184 VKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++LL EFP +A+LSF + + S G I L Q+ A+G NC P ++
Sbjct: 182 LRLLAEEFPQAEAYLSFVAQSENAISDGTKIEE--LGNLAQESPQVLAVGFNCTAPHLIA 239
Query: 243 TLVRCIKQ--SHPTVQTIVYPNKG 264
L+ + Q + P + YPN G
Sbjct: 240 PLLDVLGQVCNKP---FLTYPNSG 260
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 152/318 (47%), Gaps = 35/318 (11%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ +LDG+ +++ DV G LWS+ YL +P+ + H ++R G
Sbjct: 13 IIILDGALGTELESLGY-DVSGK-LWSAQYLLDQPQIIQDVHESYVRA-----------G 59
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA----LVRAGVDYL-ALIKPSISSQ---- 375
+ + S Y + + EA L N+ L + ++ + + P Q
Sbjct: 60 SDIITTSSYQAS-IPAFIEAGLTPEKGYNLLKETVFLAQKAIENVWTGLSPEEQKQRPYP 118
Query: 376 -TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 434
A S+GPY L DGSEY+G Y ++E + +HRP ++AL+ AG D LA+ETIP
Sbjct: 119 LVAGSVGPYAAYLADGSEYTGDY--QLSEEEFRDFHRPRIQALLEAGSDLLAIETIPNGA 176
Query: 435 EALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
EA A+++LL EFP +A+LSF + + S G I L Q+ A+G NC
Sbjct: 177 EAAAILRLLAEEFPQAEAYLSFVAQSENAISDGTKIEE--LGNLAQESPQVLAVGFNCTA 234
Query: 494 PSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEG 550
P ++ L+ + Q + P + YPN G ++ + W D E E S+L W E+G
Sbjct: 235 PHLIAPLLDVLGQVCNKP---FLTYPNSGETYNGLTKTWHDDPEQERSLLENSKLWQEQG 291
Query: 551 VNIIGGCCEVTSYEIQQM 568
V + GGCC +I Q+
Sbjct: 292 VQLFGGCCRTRPEDIAQL 309
>gi|440703796|ref|ZP_20884712.1| homocysteine S-methyltransferase [Streptomyces turgidiscabies Car8]
gi|440274638|gb|ELP63158.1| homocysteine S-methyltransferase [Streptomyces turgidiscabies Car8]
Length = 312
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/261 (37%), Positives = 132/261 (50%), Gaps = 32/261 (12%)
Query: 9 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG ++Q+ + H + D LWS+ L +PEA V+ H + AGAD+ +S YQA
Sbjct: 28 VLDGGMSNQLGSAGHDLSD----ELWSARLLVEQPEAIVDAHLAYFEAGADVAITSSYQA 83
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMN-SAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
+ K G + LL SV+L +A+ E + P + AAS+G
Sbjct: 84 TFEGFAKRGIDRERTAGLLGLSVELAREAARRTETRRP--------------LWVAASVG 129
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG +L DGSEY G Y S+ E L A+HRP VE L AG D LALET+P EA AL++
Sbjct: 130 PYGAMLADGSEYRGRYGLSVRE--LEAFHRPRVEVLAAAGPDVLALETVPDLDEADALLR 187
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
+R G WLS+S D T G+ + A L D++ A+GVNC P V V
Sbjct: 188 AVRGL-GVPVWLSYSVAGD-RTRAGQPLEEAF--ALAGEADEVVAVGVNCSVPEDVDGAV 243
Query: 246 RCIKQ--SHPTVQTIVYPNKG 264
+ P V VYPN G
Sbjct: 244 ELAARVTGKPVV---VYPNSG 261
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 142/306 (46%), Gaps = 30/306 (9%)
Query: 267 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+LDG ++Q+ + H + D LWS+ L +PEA V+ H + + A +
Sbjct: 28 VLDGGMSNQLGSAGHDLSD----ELWSARLLVEQPEAIVDAHLAYFEAGADVAITSSYQA 83
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
T ++ +D A L+ +VE L R +P AAS+GPYG
Sbjct: 84 TF----EGFAKRGIDRERTAGLLGL---SVE-LAREAARRTETRRPL---WVAASVGPYG 132
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
+L DGSEY G Y S+ E L A+HRP VE L AG D LALET+P EA AL++ +R
Sbjct: 133 AMLADGSEYRGRYGLSVRE--LEAFHRPRVEVLAAAGPDVLALETVPDLDEADALLRAVR 190
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 504
G WLS+S D T G+ + A L D++ A+GVNC P V V
Sbjct: 191 GL-GVPVWLSYSVAGD-RTRAGQPLEEAF--ALAGEADEVVAVGVNCSVPEDVDGAVELA 246
Query: 505 KQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTS 562
+ P V VYPN G VWD+ W T V W + G +IGGCC V
Sbjct: 247 ARVTGKPVV---VYPNSGEVWDADARAW--TGSSTFAAGQVTGWRDAGARLIGGCCRVGP 301
Query: 563 YEIQQM 568
I +
Sbjct: 302 EAITSI 307
>gi|359479663|ref|XP_003632324.1| PREDICTED: homocysteine S-methyltransferase 2-like [Vitis vinifera]
Length = 335
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 136/260 (52%), Gaps = 14/260 (5%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V ++DG +++ RH D PLWS+ L + P H D++ AGADII ++ YQA
Sbjct: 22 VAVIDGGLATELERHGADLND--PLWSAKCLLSSPHLIRTVHLDYLEAGADIIITASYQA 79
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH-IETAASIG 125
+ G+S E+ LL KSV++ A+ + ++ +L I AAS+G
Sbjct: 80 TIQGFEARGFSRGESEALLRKSVEIACEARK-------MYYDRYGRILKHRPILVAASVG 132
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
YG L DGSEYSG Y D +T L +HR V+ L AG D +A ET+P + EA A +
Sbjct: 133 SYGAYLADGSEYSGIYGDEITVETLKDFHRRRVQILADAGADLIAFETVPNKLEAQAYAE 192
Query: 186 LLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
LL E + AW SF+ KD H G+ + V+ + + ++ ++G+NC P + L
Sbjct: 193 LLEEENIKIPAWFSFNSKDGVHVVSGDSLLECVS--IAESCKKVVSVGINCTPPRFIHGL 250
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
+ IK+ T ++YPN G
Sbjct: 251 ILSIKKV-TTKPILIYPNSG 269
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 150/336 (44%), Gaps = 40/336 (11%)
Query: 250 QSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDF 309
Q + + GV ++DG +++ RH D PLWS+ L + P H D+
Sbjct: 7 QPSSFISDFLLQTGGVAVIDGGLATELERHGADLND--PLWSAKCLLSSPHLIRTVHLDY 64
Query: 310 IRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGV------- 362
+ + + T+ G E G + R EAL+R V
Sbjct: 65 LEAGADIIITASYQATI--QGFEARG-------------FSRGESEALLRKSVEIACEAR 109
Query: 363 ----DYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV 418
D I AAS+G YG L DGSEYSG Y D +T L +HR V+ L
Sbjct: 110 KMYYDRYGRILKHRPILVAASVGSYGAYLADGSEYSGIYGDEITVETLKDFHRRRVQILA 169
Query: 419 RAGVDYLALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCL 477
AG D +A ET+P + EA A +LL E + AW SF+ KD H G+ + V+ +
Sbjct: 170 DAGADLIAFETVPNKLEAQAYAELLEEENIKIPAWFSFNSKDGVHVVSGDSLLECVS--I 227
Query: 478 LANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLD----- 532
+ ++ ++G+NC P + L+ IK+ T ++YPN G +D +W+
Sbjct: 228 AESCKKVVSVGINCTPPRFIHGLILSIKKV-TTKPILIYPNSGESYDPEQKEWVQKTGVS 286
Query: 533 TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
ED + YV +W E G +++GGCC T I+ +
Sbjct: 287 VED---FVSYVNKWCEVGASLVGGCCRTTPNTIRAI 319
>gi|387874910|ref|YP_006305214.1| homocysteine methyltransferase [Mycobacterium sp. MOTT36Y]
gi|386788368|gb|AFJ34487.1| homocysteine methyltransferase [Mycobacterium sp. MOTT36Y]
Length = 311
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 128/260 (49%), Gaps = 25/260 (9%)
Query: 9 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
LLDG +++ H + D LWS+ L P V H + RAGA I ++ YQA
Sbjct: 15 LLDGGLATELEARGHDLSDR----LWSARLLADAPREIVAVHAAYFRAGATIATTASYQA 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G +E LL +SV+L +A+D+ G + AAS+GP
Sbjct: 71 SFEGFAARGLDRRETDLLLRRSVELAKAARDEAGPGE-----------FGGLLVAASVGP 119
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y ++ L WHRP +E L AG D LA ET+P EA ALV +
Sbjct: 120 YGAALADGSEYRGRY--GLSVGALARWHRPRLETLADAGADVLACETVPDVDEAEALVDV 177
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R G AWLS++ D T G+ ++ A + A D+I A+GVNC P V +
Sbjct: 178 VRSV-GMPAWLSYTI-DGARTRAGQPLTEAFA--VAAGVDEIVAVGVNCCAPDDVLPAIA 233
Query: 247 CIKQSHPTVQTIVYPNKGVK 266
+ V IVYPN G +
Sbjct: 234 SASEIGKPV--IVYPNSGER 251
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 144/313 (46%), Gaps = 39/313 (12%)
Query: 264 GVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
G LLDG +++ H + D LWS+ L P V H + R A+I
Sbjct: 12 GTVLLDGGLATELEARGHDLSDR----LWSARLLADAPREIVAVHAAYFR----AGATIA 63
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD------YLALIKPSISSQ 375
+ ++ +D E DL+ R +VE L +A D + L+
Sbjct: 64 TTASYQASFEGFAARGLDRR-ETDLL--LRRSVE-LAKAARDEAGPGEFGGLL------- 112
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
AAS+GPYG L DGSEY G Y ++ L WHRP +E L AG D LA ET+P E
Sbjct: 113 VAASVGPYGAALADGSEYRGRY--GLSVGALARWHRPRLETLADAGADVLACETVPDVDE 170
Query: 436 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
A ALV ++R G AWLS++ D T G+ ++ A + A D+I A+GVNC P
Sbjct: 171 AEALVDVVRSV-GMPAWLSYTI-DGARTRAGQPLTEAFA--VAAGVDEIVAVGVNCCAPD 226
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
V + + V IVYPN G WD W+ + L QW+ G I+G
Sbjct: 227 DVLPAIASASEIGKPV--IVYPNSGERWDG--RAWVGPRTFATGL--AAQWVSAGARIVG 280
Query: 556 GCCEVTSYEIQQM 568
GCC V +I ++
Sbjct: 281 GCCRVGPVDIAEL 293
>gi|300173559|ref|YP_003772725.1| homocysteine S-methyltransferase [Leuconostoc gasicomitatum LMG
18811]
gi|333447545|ref|ZP_08482487.1| homocysteine methyltransferase [Leuconostoc inhae KCTC 3774]
gi|299887938|emb|CBL91906.1| homocysteine S-methyltransferase [Leuconostoc gasicomitatum LMG
18811]
Length = 306
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 156/320 (48%), Gaps = 32/320 (10%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
Y GV +LDG S++ + I DV+ + WS+ L PE E H+++
Sbjct: 7 YIESGVVILDGGMGSELEKRQI-DVN-NSWWSASALVQSPENICEIHKNYFNA------- 57
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT--- 376
G L Y H V S T+ L L+ + V+ L K + +
Sbjct: 58 ----GASLAITDTYQAH-VKSFTDQGL---SDKKAYELIDSAVN---LAKRGLENSNRSD 106
Query: 377 ---AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
A S+GPYG L +G+EY+G Y ++E++ +HRP + L+ GV+ LALET+P
Sbjct: 107 GLIAGSVGPYGAYLANGAEYTGDY--HLSESEYQTFHRPRIARLIADGVNVLALETMPNF 164
Query: 434 KEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 492
E AL LL+ EFP A+LSF+ ++ H G +S AV + QI+AIGVNC
Sbjct: 165 DETKALGHLLQQEFPSVDAYLSFATENGDHLWDGTPLSEAV--AYFESISQIKAIGVNCT 222
Query: 493 RPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552
P ++ ++ I + + + +VYPN G +D +W+ + VP WL G +
Sbjct: 223 SPQNILPALKNIT-PNTSKKIVVYPNAGDDYDPATKRWVSQHGPINWDELVPVWLAAGAS 281
Query: 553 IIGGCCEVTSYEIQQMRIMI 572
+IGGCC + +I ++ + I
Sbjct: 282 LIGGCCRTSPEDINEIALAI 301
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 142/259 (54%), Gaps = 22/259 (8%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG S++ + I DV+ + WS+ L PE E H+++ AGA + + YQA
Sbjct: 12 VVILDGGMGSELEKRQI-DVN-NSWWSASALVQSPENICEIHKNYFNAGASLAITDTYQA 69
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+V + T G S+++A +L+ +V L + N N++ L+ G S+GP
Sbjct: 70 HVKSFTDQGLSDKKAYELIDSAVNLAKRGLE--------NSNRSDGLIAG------SVGP 115
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L +G+EY+G Y ++E++ +HRP + L+ GV+ LALET+P E AL L
Sbjct: 116 YGAYLANGAEYTGDY--HLSESEYQTFHRPRIARLIADGVNVLALETMPNFDETKALGHL 173
Query: 187 L-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
L +EFP A+LSF+ ++ H G +S AV + QI+AIGVNC P ++ +
Sbjct: 174 LQQEFPSVDAYLSFATENGDHLWDGTPLSEAV--AYFESISQIKAIGVNCTSPQNILPAL 231
Query: 246 RCIKQSHPTVQTIVYPNKG 264
+ I + + + +VYPN G
Sbjct: 232 KNIT-PNTSKKIVVYPNAG 249
>gi|296085232|emb|CBI28727.3| unnamed protein product [Vitis vinifera]
Length = 328
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 134/261 (51%), Gaps = 23/261 (8%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V ++DG +++ RH D PLWS+ L + P H D++ AGADII ++ YQA
Sbjct: 22 VAVIDGGLATELERHGADLND--PLWSAKCLLSSPHLIRTVHLDYLEAGADIIITASYQA 79
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH--IETAASI 124
+ G+S E+ LL KSV++ A+ ++ H I AAS+
Sbjct: 80 TIQGFEARGFSRGESEALLRKSVEIACEAR---------------KMILKHRPILVAASV 124
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
G YG L DGSEYSG Y D +T L +HR V+ L AG D +A ET+P + EA A
Sbjct: 125 GSYGAYLADGSEYSGIYGDEITVETLKDFHRRRVQILADAGADLIAFETVPNKLEAQAYA 184
Query: 185 KLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
+LL E + AW SF+ KD H G+ + V+ + + ++ ++G+NC P +
Sbjct: 185 ELLEEENIKIPAWFSFNSKDGVHVVSGDSLLECVS--IAESCKKVVSVGINCTPPRFIHG 242
Query: 244 LVRCIKQSHPTVQTIVYPNKG 264
L+ IK+ T ++YPN G
Sbjct: 243 LILSIKKV-TTKPILIYPNSG 262
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 151/329 (45%), Gaps = 33/329 (10%)
Query: 250 QSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDF 309
Q + + GV ++DG +++ RH D PLWS+ L + P H D+
Sbjct: 7 QPSSFISDFLLQTGGVAVIDGGLATELERHGADLND--PLWSAKCLLSSPHLIRTVHLDY 64
Query: 310 IRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIK 369
+ + + T+ G E G + R EAL+R V+ +
Sbjct: 65 LEAGADIIITASYQATI--QGFEARG-------------FSRGESEALLRKSVEIACEAR 109
Query: 370 PSISSQ----TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL 425
I AAS+G YG L DGSEYSG Y D +T L +HR V+ L AG D +
Sbjct: 110 KMILKHRPILVAASVGSYGAYLADGSEYSGIYGDEITVETLKDFHRRRVQILADAGADLI 169
Query: 426 ALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 484
A ET+P + EA A +LL E + AW SF+ KD H G+ + V+ + + ++
Sbjct: 170 AFETVPNKLEAQAYAELLEEENIKIPAWFSFNSKDGVHVVSGDSLLECVS--IAESCKKV 227
Query: 485 QAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLD-----TEDEYSI 539
++G+NC P + L+ IK+ T ++YPN G +D +W+ ED
Sbjct: 228 VSVGINCTPPRFIHGLILSIKKV-TTKPILIYPNSGESYDPEQKEWVQKTGVSVED---F 283
Query: 540 LHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+ YV +W E G +++GGCC T I+ +
Sbjct: 284 VSYVNKWCEVGASLVGGCCRTTPNTIRAI 312
>gi|225423971|ref|XP_002282549.1| PREDICTED: homocysteine S-methyltransferase 1 [Vitis vinifera]
gi|297737821|emb|CBI27022.3| unnamed protein product [Vitis vinifera]
Length = 325
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 134/263 (50%), Gaps = 22/263 (8%)
Query: 9 LLDGSFTSQVSRH--TIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
++DG F +Q+ H TI D PLWS++ L +P+ H +++ AGADI+ +S YQA
Sbjct: 20 VVDGGFATQLEIHGATIND----PLWSALCLIKDPDLIKRVHLEYLEAGADILVTSSYQA 75
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK----ENQTPDINLNKTFNLLTGHIETAA 122
+ G S +E LL +SV+L A+DK + P N+ AA
Sbjct: 76 TIPGFLSKGLSIEEGELLLERSVRLAVEARDKFWDVTKRVPGHGYNRAL--------VAA 127
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
SIG YG L DGSEYSG Y M L +HR ++ LVR+ D LA ETIP + EA A
Sbjct: 128 SIGSYGAYLADGSEYSGCYGPDMNLDKLKDFHRRRLQVLVRSCPDLLAFETIPNKLEAQA 187
Query: 183 LVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 241
V+LL E Q +W+ FS D + GE + ++ ++ A+G+NC P +
Sbjct: 188 CVELLEEENVQIPSWICFSSVDGENAPSGESFKECLD--IINKSKKVNAVGINCAPPHFL 245
Query: 242 STLVRCIKQSHPTVQTIVYPNKG 264
+L+ C + +VYPN G
Sbjct: 246 ESLI-CKFKELTEKPIVVYPNSG 267
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 162/341 (47%), Gaps = 28/341 (8%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRH--TIKDVDGHPLWSSVYLTTEPEACVET 305
+ ++ ++ ++ G ++DG F +Q+ H TI D PLWS++ L +P+
Sbjct: 1 MGKTSSLLEDLIEKAGGCAVVDGGFATQLEIHGATIND----PLWSALCLIKDPDLIKRV 56
Query: 306 HRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL 365
H +++ + + T+ G G S+ E +L+ +V V A +
Sbjct: 57 HLEYLEAGADILVTSSYQATI--PGFLSKGL---SIEEGELLL--ERSVRLAVEARDKFW 109
Query: 366 ALIKPSIS-----SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 420
+ K + AASIG YG L DGSEYSG Y M L +HR ++ LVR+
Sbjct: 110 DVTKRVPGHGYNRALVAASIGSYGAYLADGSEYSGCYGPDMNLDKLKDFHRRRLQVLVRS 169
Query: 421 GVDYLALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLA 479
D LA ETIP + EA A V+LL E Q +W+ FS D + GE + ++
Sbjct: 170 CPDLLAFETIPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFKECLD--IIN 227
Query: 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDT----ED 535
++ A+G+NC P + +L+ C + +VYPN G VWD +WL + +D
Sbjct: 228 KSKKVNAVGINCAPPHFLESLI-CKFKELTEKPIVVYPNSGEVWDGRAKRWLPSKCFGDD 286
Query: 536 EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEFN 576
++ + Y +W + G +IGGCC T I+ + ++ E +
Sbjct: 287 KFEL--YATKWRDLGAKLIGGCCRTTPSTIRAISKVLKEMS 325
>gi|422821310|ref|ZP_16869503.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK353]
gi|422870987|ref|ZP_16917480.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1087]
gi|324991224|gb|EGC23158.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK353]
gi|328946141|gb|EGG40286.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1087]
Length = 315
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 144/264 (54%), Gaps = 20/264 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ +LDG+ +++ DV G LWS+ YL +P+ + H ++RA +DII +S YQ
Sbjct: 12 EIIILDGALGTELESLGY-DVSGK-LWSAQYLLDQPQIIQDVHESYVRADSDIITTSSYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQ--TPDINLNKTFNLLTGHIETAAS 123
A++ + G + ++A DLL ++V L A + Q +P+ + + L+ G S
Sbjct: 70 ASIPVFIEAGLTPEKAYDLLKETVFLAQKAIENTWQALSPEEQKQRPYPLVAG------S 123
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPY L DGSEY+G Y ++E + +HRP ++AL+ AG D LA+ETIP EA A+
Sbjct: 124 VGPYAAYLADGSEYTGDY--QLSEEEYRDFHRPRIQALLEAGSDLLAIETIPNGAEAAAI 181
Query: 184 VKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++LL EFP +A+LSF + + S G I L Q+ A+G NC P ++
Sbjct: 182 LRLLAEEFPQAEAYLSFVAQSENAISDGTKIEE--LGNLAQESPQVLAVGFNCTAPHLIT 239
Query: 243 TLVRCIKQ--SHPTVQTIVYPNKG 264
L+ + Q + P + YPN G
Sbjct: 240 PLLDGLGQVCNKP---FLTYPNSG 260
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 150/315 (47%), Gaps = 29/315 (9%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH--IETAASIGP 322
+ +LDG+ +++ DV G LWS+ YL +P+ + H ++R I T +S
Sbjct: 13 IIILDGALGTELESLGY-DVSGK-LWSAQYLLDQPQIIQDVHESYVRADSDIITTSSYQA 70
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-----TA 377
V + D + E +A + +E +A + P Q A
Sbjct: 71 SIPVFIEAGLTPEKAYDLLKETVFLA--QKAIENTWQA-------LSPEEQKQRPYPLVA 121
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
S+GPY L DGSEY+G Y ++E + +HRP ++AL+ AG D LA+ETIP EA
Sbjct: 122 GSVGPYAAYLADGSEYTGDY--QLSEEEYRDFHRPRIQALLEAGSDLLAIETIPNGAEAA 179
Query: 438 ALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
A+++LL EFP +A+LSF + + S G I L Q+ A+G NC P
Sbjct: 180 AILRLLAEEFPQAEAYLSFVAQSENAISDGTKIEE--LGNLAQESPQVLAVGFNCTAPHL 237
Query: 497 VSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEGVNI 553
++ L+ + Q + P + YPN G ++ + W D E E S+L W +GV +
Sbjct: 238 ITPLLDGLGQVCNKP---FLTYPNSGETYNGLTKTWHDDPEQERSLLENSKLWQNQGVRL 294
Query: 554 IGGCCEVTSYEIQQM 568
GGCC +I Q+
Sbjct: 295 FGGCCRTRPEDITQL 309
>gi|238020029|ref|ZP_04600455.1| hypothetical protein VEIDISOL_01905 [Veillonella dispar ATCC 17748]
gi|237863553|gb|EEP64843.1| hypothetical protein VEIDISOL_01905 [Veillonella dispar ATCC 17748]
Length = 341
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 140/280 (50%), Gaps = 36/280 (12%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG S++ R+ H LWS+ L +P+ + H ++ AGADIIQSS YQA V
Sbjct: 22 VLDGGLGSELERYGCNLQ--HKLWSAKILMDQPDIIKKIHISYLAAGADIIQSSGYQATV 79
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK-----------------ENQTPDINLNKTF 111
LGY +EA++L+ SV+L A+++ +TPD +
Sbjct: 80 AGFKGLGYGTEEAIELVKLSVRLAVQARNEFVEAKASGALTLRGITLGEETPDGVRYFSE 139
Query: 112 NLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 171
L + AAS+GPYG L DGSEY G Y D TE L +H P + D L+
Sbjct: 140 GALPKPL-VAASVGPYGAFLADGSEYRG-YPDVQTEY-LEIFHIPRLALFCEENPDILSF 196
Query: 172 ETIPAEKEALALVKLL------REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP 225
ETIP+ EA+A+ + + R PG W++FSCKD H S GE I P
Sbjct: 197 ETIPSYDEAIAIARAMSDPYTSRGIPG---WIAFSCKDGHHVSSGETIIKCAEMIDKVRP 253
Query: 226 DQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTI-VYPNKG 264
I IGVNC +P +V +L++ I+ T + I VYPN G
Sbjct: 254 --ITGIGVNCTKPEYVESLIKDIRTV--TDKPIAVYPNLG 289
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 111/330 (33%), Positives = 148/330 (44%), Gaps = 48/330 (14%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
KG +LDG S++ R+ H LWS+ L +P+ + H ++ + S G
Sbjct: 17 EKGALVLDGGLGSELERYGCNLQ--HKLWSAKILMDQPDIIKKIHISYLAAGADIIQSSG 74
Query: 322 PYGTV-----LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA---------------G 361
TV L G+E + V + A + VEA G
Sbjct: 75 YQATVAGFKGLGYGTEEAIELVKLSVRLAVQARNE-FVEAKASGALTLRGITLGEETPDG 133
Query: 362 VDYL---ALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV 418
V Y AL KP + AAS+GPYG L DGSEY G Y D TE L +H P +
Sbjct: 134 VRYFSEGALPKPLV----AASVGPYGAFLADGSEYRG-YPDVQTEY-LEIFHIPRLALFC 187
Query: 419 RAGVDYLALETIPAEKEALALVKLL------REFPGQKAWLSFSCKDDTHTSHGELISSA 472
D L+ ETIP+ EA+A+ + + R PG W++FSCKD H S GE I
Sbjct: 188 EENPDILSFETIPSYDEAIAIARAMSDPYTSRGIPG---WIAFSCKDGHHVSSGETIIKC 244
Query: 473 VTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTI-VYPNKGGVWDSVHMKWL 531
P I IGVNC +P +V +L++ I+ T + I VYPN G +DS W
Sbjct: 245 AEMIDKVRP--ITGIGVNCTKPEYVESLIKDIRTV--TDKPIAVYPNLGESYDSETKTWY 300
Query: 532 DTEDEYSILHYVPQWLEEGVNIIGGCCEVT 561
D S + YV W G +IIGGCC T
Sbjct: 301 G--DPASFVDYVDVWRNAGADIIGGCCRTT 328
>gi|339301303|ref|ZP_08650411.1| homocysteine S-methyltransferase [Streptococcus agalactiae ATCC
13813]
gi|319745302|gb|EFV97620.1| homocysteine S-methyltransferase [Streptococcus agalactiae ATCC
13813]
Length = 335
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 157/272 (57%), Gaps = 17/272 (6%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K +L G+ +++ DV G LWS+ YL +P A H D+IRAGADI+ +S YQ
Sbjct: 33 KTFILHGALGTELESRGC-DVSGK-LWSAKYLIEDPAAIQTIHEDYIRAGADIVTTSTYQ 90
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAAS 123
A + L ++G SE +A DL+ +VQL +A+++ ++ T + + + L++G
Sbjct: 91 ATLQGLAQVGVSESQAEDLIRLTVQLAKAAREQVWKSLTKEEKSERIYPLISG------D 144
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPY L DGSEY+G Y + + DL +HR +E L+ VD LALETIP +EA AL
Sbjct: 145 VGPYAAFLADGSEYTGLY--DIDKEDLKNFHRHRIELLLDEDVDLLALETIPNAQEAEAL 202
Query: 184 VKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++LL E FP +A++SF+ +D S G + + + + A+P Q+ A+G+NC PS V+
Sbjct: 203 IELLAEDFPQVEAYMSFTSQDGKTISDGSAV-AGLAKAINASP-QVVALGINCSSPSLVA 260
Query: 243 TLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTS 274
++ I + + YPN G ++ DG+ S
Sbjct: 261 DFLQAIAE-QTNKPLVTYPNSG-EVYDGASQS 290
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 148/294 (50%), Gaps = 22/294 (7%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMT 342
DV G LWS+ YL +P A H D+IR + + Y L+ ++ V
Sbjct: 51 DVSGK-LWSAKYLIEDPAAIQTIHEDYIRAGADIVTT-STYQATLQGLAQVG---VSESQ 105
Query: 343 EADLIAWHRPNVEALVRAGVD--YLALIKPSISSQT----AASIGPYGTVLRDGSEYSGH 396
DLI R V+ L +A + + +L K S + + +GPY L DGSEY+G
Sbjct: 106 AEDLI---RLTVQ-LAKAAREQVWKSLTKEEKSERIYPLISGDVGPYAAFLADGSEYTGL 161
Query: 397 YVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE-FPGQKAWLSF 455
Y + + DL +HR +E L+ VD LALETIP +EA AL++LL E FP +A++SF
Sbjct: 162 Y--DIDKEDLKNFHRHRIELLLDEDVDLLALETIPNAQEAEALIELLAEDFPQVEAYMSF 219
Query: 456 SCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIV 515
+ +D S G + + + + A+P Q+ A+G+NC PS V+ ++ I + +
Sbjct: 220 TSQDGKTISDGSAV-AGLAKAINASP-QVVALGINCSSPSLVADFLQAIAE-QTNKPLVT 276
Query: 516 YPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
YPN G V+D W + D +++L W + G ++GGCC +I +
Sbjct: 277 YPNSGEVYDGASQSWQSSPDHSHTLLENTSDWQKLGAQVVGGCCRTRPADIADL 330
>gi|328725536|ref|XP_003248519.1| PREDICTED: homocysteine S-methyltransferase-like [Acyrthosiphon
pisum]
Length = 328
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 122/231 (52%), Gaps = 5/231 (2%)
Query: 335 GHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYS 394
G + EA + +V+ RA DY A + A S+GPYG L +G+EY
Sbjct: 93 GFAARGLDEAQALTLIDQSVKLAQRARDDYRAASGSEAALLVAGSVGPYGAYLANGAEYR 152
Query: 395 GHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLS 454
G Y ++ EA++ +HRP V+AL+ AGVD LA ET+P+ EA ALV LL E+P AW S
Sbjct: 153 GDY--ALPEAEMKDFHRPRVKALLDAGVDLLACETLPSFAEAQALVSLLAEYPNSSAWFS 210
Query: 455 FSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTI 514
F+ D H S G +S V + A P Q+ A+G+NCV V+ ++ + Q+ +
Sbjct: 211 FTLCDAQHISDGTPLSQ-VAELVNAAP-QVVAMGINCVALESVTPALQTL-QALCAKPLL 267
Query: 515 VYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
VYPN G +D+ W ++ P+W + G +IGGCC T +I
Sbjct: 268 VYPNSGEQYDASSKTWHSAPSGCTLQDKFPEWQQAGARLIGGCCRTTPQDI 318
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 123/240 (51%), Gaps = 14/240 (5%)
Query: 51 FIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKT 110
AGA++ ++ YQA G E +AL L+ +SV+L A+D +
Sbjct: 74 LFAAGANVAITASYQATPQGFAARGLDEAQALTLIDQSVKLAQRARDD---------YRA 124
Query: 111 FNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 170
+ + A S+GPYG L +G+EY G Y ++ EA++ +HRP V+AL+ AGVD LA
Sbjct: 125 ASGSEAALLVAGSVGPYGAYLANGAEYRGDY--ALPEAEMKDFHRPRVKALLDAGVDLLA 182
Query: 171 LETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQA 230
ET+P+ EA ALV LL E+P AW SF+ D H S G +S V + A P Q+ A
Sbjct: 183 CETLPSFAEAQALVSLLAEYPNSSAWFSFTLCDAQHISDGTPLSQ-VAELVNAAP-QVVA 240
Query: 231 IGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLW 290
+G+NCV V+ ++ + Q+ +VYPN G + S T + D P W
Sbjct: 241 MGINCVALESVTPALQTL-QALCAKPLLVYPNSGEQYDASSKTWHSAPSGCTLQDKFPEW 299
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 317 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 366
A S+GPYG L +G+EY G Y ++ EA++ +HRP V+AL+ AGVD LA
Sbjct: 135 AGSVGPYGAYLANGAEYRGDY--ALPEAEMKDFHRPRVKALLDAGVDLLA 182
>gi|225432744|ref|XP_002283044.1| PREDICTED: homocysteine S-methyltransferase 3 isoform 1 [Vitis
vinifera]
gi|297737089|emb|CBI26290.3| unnamed protein product [Vitis vinifera]
Length = 330
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 141/281 (50%), Gaps = 17/281 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG +++ RH D PLWS+ L P+ H D++ AGA II ++ YQA +
Sbjct: 24 VIDGGLATELERHGADLND--PLWSATCLIHSPDLIRRVHLDYLEAGASIIITASYQATI 81
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G S +EA LL +SV++ A+D ++ K L I AAS+G YG
Sbjct: 82 QGFEAKGLSREEAEVLLRRSVEIACEARDIYHE----RCAKGTCLEQRPILVAASVGSYG 137
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEYSGHY ++T L +HR V+ L +G D +A ETIP + EA A +LL
Sbjct: 138 AYLADGSEYSGHYGAAVTLETLKDFHRRRVQVLAESGADLIAFETIPNKLEAKAYAELLD 197
Query: 189 EFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
E + AW SF+ D + G+ + +S SC Q+ A+G+NC P + L
Sbjct: 198 EENIKIPAWFSFTSLDGINVVSGDSLIECASIADSC-----KQVVAVGINCTPPRFIHGL 252
Query: 245 VRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD 285
+ I Q T ++YPN G + DG V ++D D
Sbjct: 253 ILLI-QKVTTKPVVIYPNSG-ETYDGVRKEWVKSSGVQDGD 291
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 162/338 (47%), Gaps = 33/338 (9%)
Query: 253 PTVQT-IVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIR 311
PT + + G ++DG +++ RH D PLWS+ L P+ H D++
Sbjct: 9 PTFMADFIRQSGGYAVIDGGLATELERHGADLND--PLWSATCLIHSPDLIRRVHLDYL- 65
Query: 312 GHIETAASI---GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA-GVDYLAL 367
E ASI Y ++ G E G S EA+++ R +VE A + +
Sbjct: 66 ---EAGASIIITASYQATIQ-GFEAKGL---SREEAEVLL--RRSVEIACEARDIYHERC 116
Query: 368 IKPSISSQ----TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 423
K + Q AAS+G YG L DGSEYSGHY ++T L +HR V+ L +G D
Sbjct: 117 AKGTCLEQRPILVAASVGSYGAYLADGSEYSGHYGAAVTLETLKDFHRRRVQVLAESGAD 176
Query: 424 YLALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLA 479
+A ETIP + EA A +LL E + AW SF+ D + G+ + +S SC
Sbjct: 177 LIAFETIPNKLEAKAYAELLDEENIKIPAWFSFTSLDGINVVSGDSLIECASIADSC--- 233
Query: 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE--DEY 537
Q+ A+G+NC P + L+ I Q T ++YPN G +D V +W+ + +
Sbjct: 234 --KQVVAVGINCTPPRFIHGLILLI-QKVTTKPVVIYPNSGETYDGVRKEWVKSSGVQDG 290
Query: 538 SILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEF 575
+ YV +W E G ++ GGCC + + I+ + + + +
Sbjct: 291 DFVSYVSKWREAGASLFGGCCRTSPHTIRAISMTLSSY 328
>gi|330718895|ref|ZP_08313495.1| homocysteine methyltransferase [Leuconostoc fallax KCTC 3537]
Length = 308
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 152/328 (46%), Gaps = 52/328 (15%)
Query: 268 LDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVL 327
LDG S++ + I +VD + LWS+ L P + H+
Sbjct: 15 LDGGMGSELEQQNI-NVDNN-LWSASALIQSPGTIAKIHQ-------------------- 52
Query: 328 RDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD------------YLALIKPSISSQ 375
HY D+ + + ++ +V + G D +LA ++S+Q
Sbjct: 53 --------HYFDAGAQGAITDTYQAHVATFLAQGFDSHKAYELIDTAVHLAKEGLALSTQ 104
Query: 376 ----TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
S+GPYG L +G+EY+G Y +++ +HR +E LV+ VD + LET+P
Sbjct: 105 DDGLIIGSVGPYGAYLANGAEYTGDY--HLSKQAYQDFHRQRIERLVQDEVDLIGLETMP 162
Query: 432 AEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490
EA AL +LL EF A+LSFS KD G +++AV QI+AIGVN
Sbjct: 163 NFTEAQALAELLETEFSETPAYLSFSIKDGNTLCDGTSLATAVG--YFEKYAQIKAIGVN 220
Query: 491 CVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEG 550
C P ++ T ++ I Q T Q I+YPN G +D +W+D VPQWL +G
Sbjct: 221 CTAPDNILTALQAI-QPQTTKQIIIYPNAGDTYDPQTKQWVDDYGPIDWQELVPQWLNQG 279
Query: 551 VNIIGGCCEVTSYEIQQMRIMIDEFNTK 578
IIGGCC T +I ++ ID + K
Sbjct: 280 ATIIGGCCRTTPKDIIAIKQAIDSWCRK 307
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 127/256 (49%), Gaps = 22/256 (8%)
Query: 10 LDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVD 69
LDG S++ + I +VD + LWS+ L P + H+ + AGA + YQA+V
Sbjct: 15 LDGGMGSELEQQNI-NVDNN-LWSASALIQSPGTIAKIHQHYFDAGAQGAITDTYQAHVA 72
Query: 70 NLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGT 129
G+ +A +L+ +V L Q L+ G S+GPYG
Sbjct: 73 TFLAQGFDSHKAYELIDTAVHLAKEGLALSTQDD--------GLIIG------SVGPYGA 118
Query: 130 VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR- 188
L +G+EY+G Y +++ +HR +E LV+ VD + LET+P EA AL +LL
Sbjct: 119 YLANGAEYTGDY--HLSKQAYQDFHRQRIERLVQDEVDLIGLETMPNFTEAQALAELLET 176
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EF A+LSFS KD G +++AV QI+AIGVNC P ++ T ++ I
Sbjct: 177 EFSETPAYLSFSIKDGNTLCDGTSLATAVG--YFEKYAQIKAIGVNCTAPDNILTALQAI 234
Query: 249 KQSHPTVQTIVYPNKG 264
Q T Q I+YPN G
Sbjct: 235 -QPQTTKQIIIYPNAG 249
>gi|348680513|gb|EGZ20329.1| hypothetical protein PHYSODRAFT_488060 [Phytophthora sojae]
Length = 333
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 114/218 (52%), Gaps = 15/218 (6%)
Query: 362 VDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-A 420
+D IKP + ASIG YG L DGSEY G Y MT+ +L+AWH+ A
Sbjct: 122 LDQTKRIKPLV----GASIGCYGAALADGSEYRGDY--GMTKEELVAWHKHRFAYFTNYA 175
Query: 421 GVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL--L 478
D+L ETIP E A V LL EFP A ++ +C++ T + GE I+ +T L L
Sbjct: 176 PADFLICETIPCLVEVEAFVDLLNEFPTAHAIVAVACRNGTELNSGEPIAR-MTEVLSKL 234
Query: 479 ANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWL---DTED 535
NP Q+ AIG+NC P HV +L+R K VYPN G WD V+ KWL T
Sbjct: 235 KNPSQLLAIGINCTPPQHVESLLR--KLDAAAWPKAVYPNSGEGWDGVNKKWLPADSTGG 292
Query: 536 EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMID 573
S ++P+W + G I GGCC + +I+ +R +
Sbjct: 293 PSSWEEFLPKWYDAGARIFGGCCRTSPDDIRAIREFFE 330
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 118/224 (52%), Gaps = 16/224 (7%)
Query: 45 VETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALD-LLHKSVQLMNSAKDKENQTP 103
V+ H+ + AGAD+ ++ YQA+VD + G + E ++ L KS+ L A+D
Sbjct: 63 VDAHKTYFLAGADVATTASYQASVDGFKREGVTAIEDVEKLFAKSIDLGVQARDA--AWS 120
Query: 104 DINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR 163
+++ K L G ASIG YG L DGSEY G Y MT+ +L+AWH+
Sbjct: 121 ELDQTKRIKPLVG-----ASIGCYGAALADGSEYRGDY--GMTKEELVAWHKHRFAYFTN 173
Query: 164 -AGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL- 221
A D+L ETIP E A V LL EFP A ++ +C++ T + GE I+ +T L
Sbjct: 174 YAPADFLICETIPCLVEVEAFVDLLNEFPTAHAIVAVACRNGTELNSGEPIAR-MTEVLS 232
Query: 222 -LANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
L NP Q+ AIG+NC P HV +L+R K VYPN G
Sbjct: 233 KLKNPSQLLAIGINCTPPQHVESLLR--KLDAAAWPKAVYPNSG 274
>gi|384246037|gb|EIE19528.1| homocysteine S-methyltransferase AtHMT-1 [Coccomyxa subellipsoidea
C-169]
Length = 296
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 126/241 (52%), Gaps = 18/241 (7%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQ 90
LWS+ L +P A + H F AGAD+ ++ YQA+ + G+ +A +LL KSVQ
Sbjct: 10 LWSARMLAEDPAAVTQVHAAFYEAGADVATTASYQASFKGFEQAGFGRADAEELLRKSVQ 69
Query: 91 LMNSAKD---KENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTE 147
L ++A+ E K L A S GPYG L DGSEY G Y + ++E
Sbjct: 70 LADNARRLFWSEGSELHGWRAKRLRPL-----VAFSAGPYGAALADGSEYDGSYAERVSE 124
Query: 148 ADLIAWHRPNVEALVRA-GVDYLALETIPAEKEALALVKLL-REFPGQKAWLSFSCKDDT 205
L+ +HR ++A+V A GVD +A ET+P KE A+ +LL E G AW+S S + T
Sbjct: 125 EQLMDFHRQRLQAIVGAPGVDLIAFETVPCLKELRAISRLLCTEQLGIPAWISCSARSGT 184
Query: 206 HTSHGELISSAVTSCL--LANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNK 263
HGE + + CL + P + A+GVNC+ P V L IKQ PT + YPN
Sbjct: 185 AICHGEDL---LEECLPVMCEPASVVAVGVNCLPPQLVDPL---IKQGLPTKLLLAYPNS 238
Query: 264 G 264
G
Sbjct: 239 G 239
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 133/293 (45%), Gaps = 26/293 (8%)
Query: 289 LWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA 348
LWS+ L +P A + H F + A T + + G AD
Sbjct: 10 LWSARMLAEDPAAVTQVHAAFYEAGADVA-------TTASYQASFKGFEQAGFGRADAEE 62
Query: 349 WHRPNVEALVRA-------GVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSM 401
R +V+ A G + + A S GPYG L DGSEY G Y + +
Sbjct: 63 LLRKSVQLADNARRLFWSEGSELHGWRAKRLRPLVAFSAGPYGAALADGSEYDGSYAERV 122
Query: 402 TEADLIAWHRPNVEALVRA-GVDYLALETIPAEKEALALVKLL-REFPGQKAWLSFSCKD 459
+E L+ +HR ++A+V A GVD +A ET+P KE A+ +LL E G AW+S S +
Sbjct: 123 SEEQLMDFHRQRLQAIVGAPGVDLIAFETVPCLKELRAISRLLCTEQLGIPAWISCSARS 182
Query: 460 DTHTSHGELISSAVTSCL--LANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 517
T HGE + + CL + P + A+GVNC+ P V L IKQ PT + YP
Sbjct: 183 GTAICHGEDL---LEECLPVMCEPASVVAVGVNCLPPQLVDPL---IKQGLPTKLLLAYP 236
Query: 518 NKGGVWDSVHMKWLDTE--DEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
N G WD+ W + + + QW + G +IIGGCC T I+ +
Sbjct: 237 NSGEEWDAAARDWKGSSGLEVQNFGCSARQWADSGASIIGGCCRTTPEHIRSV 289
>gi|255552095|ref|XP_002517092.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
[Ricinus communis]
gi|223543727|gb|EEF45255.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
[Ricinus communis]
Length = 348
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 143/273 (52%), Gaps = 19/273 (6%)
Query: 1 MSKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQ 60
+ K ++DG F +++ RH D PLWS+ L + P H D+I AGA+II
Sbjct: 17 LQKCGGYAVIDGGFATELERHGADLND--PLWSAKCLISSPHLVRRVHLDYIDAGANIIL 74
Query: 61 SSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKD--KENQTP-DINLNKTFNLLTGH 117
++ YQA + G S +EA LL +SV++ A++ +N T +L + +
Sbjct: 75 TASYQATIQGFEAKGLSTEEAEQLLRRSVEIACEAREIYYDNCTKGSWDLMEDGKMSRHP 134
Query: 118 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 177
+ AASIG YG L DGSEYSG Y D+++ L +HR ++ L ++G D +A ETIP +
Sbjct: 135 VLVAASIGSYGAYLADGSEYSGDYGDAVSIQTLKDFHRRRLQILAKSGADLIAFETIPNK 194
Query: 178 KEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGV 233
EA A +LL E P AW SF+ KD + G+ I + + + Q+ A+G+
Sbjct: 195 LEAKAYAELLEEEGINIP---AWFSFNSKDGINVVSGDSILECAS--IADSSKQVVAVGI 249
Query: 234 NCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKG 264
NC P + L+ +++ S P V +YPN G
Sbjct: 250 NCTPPRFIHGLILSMREATSKPIV---IYPNSG 279
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 154/325 (47%), Gaps = 37/325 (11%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G ++DG F +++ RH D PLWS+ L + P H D+I +
Sbjct: 22 GYAVIDGGFATELERHGADLND--PLWSAKCLISSPHLVRRVHLDYIDAGANIILTASYQ 79
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA--------LIKPSISSQ 375
T+ G E G S EA+ + R +VE A Y L++ S+
Sbjct: 80 ATI--QGFEAKGL---STEEAEQLL--RRSVEIACEAREIYYDNCTKGSWDLMEDGKMSR 132
Query: 376 ----TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
AASIG YG L DGSEYSG Y D+++ L +HR ++ L ++G D +A ETIP
Sbjct: 133 HPVLVAASIGSYGAYLADGSEYSGDYGDAVSIQTLKDFHRRRLQILAKSGADLIAFETIP 192
Query: 432 AEKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
+ EA A +LL E P AW SF+ KD + G+ I + + + Q+ A+
Sbjct: 193 NKLEAKAYAELLEEEGINIP---AWFSFNSKDGINVVSGDSILECAS--IADSSKQVVAV 247
Query: 488 GVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDT--EDEYSILHYV 543
G+NC P + L+ +++ S P V +YPN G +D+ +W+ + + + Y+
Sbjct: 248 GINCTPPRFIHGLILSMREATSKPIV---IYPNSGETYDAALKQWVKSCGASDEDFVSYI 304
Query: 544 PQWLEEGVNIIGGCCEVTSYEIQQM 568
+W E G ++ GGCC T I+ +
Sbjct: 305 GKWREAGASLFGGCCRTTPNTIRAI 329
>gi|294625945|ref|ZP_06704557.1| homocysteine methyltransferase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292599740|gb|EFF43865.1| homocysteine methyltransferase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 321
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 160/333 (48%), Gaps = 30/333 (9%)
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE 300
++ L R + + P Q + + G +LDG+ +++ + D LWS+ L +PE
Sbjct: 1 MTILPRQPRPNAPFSQALQH--DGYVVLDGALATELEQRGCDLNDA--LWSARVLMEQPE 56
Query: 301 ACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 360
+ HRD+ + A + T L ++ +D LIA +V V+A
Sbjct: 57 LIYQVHRDYFAAGAQCAITASYQATPL----GFAARGLDVAQAQALIA---RSVALAVQA 109
Query: 361 GVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 420
D+L L + A +GPYG L DGSEY G YV + + L+ +HRP + AL A
Sbjct: 110 RADHLTLHPHAAPLWVAGLVGPYGAYLADGSEYRGDYVLPIEQ--LMDFHRPRIAALAEA 167
Query: 421 GVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 479
GVD LA ET+P+ E +AL +LL+ +FP AW SF+ +D H S G ++ V + L
Sbjct: 168 GVDLLACETLPSVSEIVALRQLLQHDFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LD 225
Query: 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-------LD 532
Q+ A+GVNC+ + + + + + +VYPN G +D+ +W L
Sbjct: 226 ACAQVIAVGVNCIALDQATAALHSLS-ALTALPLVVYPNSGEHYDASDKRWHAGRGAALT 284
Query: 533 TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
D+++ WL G +IGGCC +I
Sbjct: 285 LADQHA------HWLAAGARLIGGCCRTAPRDI 311
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 129/257 (50%), Gaps = 17/257 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + D LWS+ L +PE + HRD+ AGA ++ YQA
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G +A L+ +SV L A+ + T + + A +GPYG
Sbjct: 83 LGFAARGLDVAQAQALIARSVALAVQARAD---------HLTLHPHAAPLWVAGLVGPYG 133
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV + + L+ +HRP + AL AGVD LA ET+P+ E +AL +LL+
Sbjct: 134 AYLADGSEYRGDYVLPIEQ--LMDFHRPRIAALAEAGVDLLACETLPSVSEIVALRQLLQ 191
Query: 189 -EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
+FP AW SF+ +D H S G ++ V + L Q+ A+GVNC+ + +
Sbjct: 192 HDFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LDACAQVIAVGVNCIALDQATAALHS 249
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + + +VYPN G
Sbjct: 250 LS-ALTALPLVVYPNSG 265
>gi|409350909|ref|ZP_11233852.1| Homocysteine S-methyltransferase [Lactobacillus equicursoris CIP
110162]
gi|407877091|emb|CCK85910.1| Homocysteine S-methyltransferase [Lactobacillus equicursoris CIP
110162]
Length = 312
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 140/267 (52%), Gaps = 20/267 (7%)
Query: 1 MSKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQ 60
+ K+ K +LDGS ++ + + + LW++ L P+ + H D+ +AGA I
Sbjct: 5 LDKLTKPVILDGSMSTPL--EAMGEETSSDLWTAKALVDHPDRVYQVHYDYFKAGARITI 62
Query: 61 SSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIET 120
++ YQAN+ K GYSE EA DL+ KS ++ A+D Q + H
Sbjct: 63 TNSYQANLPAFAKYGYSEDEARDLIKKSAEIAIQARDDYEQATGV-----------HNYV 111
Query: 121 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 180
A S+GPYG L DG+EY G+Y +T + + +H P ++ LV+ G D LA+ET P +E
Sbjct: 112 AGSVGPYGAYLADGNEYRGNY--HLTPEEYVNFHAPRIDELVQGGADCLAIETQPKLEEV 169
Query: 181 LALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 239
LA++ +++ +P ++SFS KD S G ++ A + + Q+ A GVNC++
Sbjct: 170 LAILDYVQKTYPALAVYVSFSLKDPQTISEGTSLTEAAQA--VQKYPQVFATGVNCMKLK 227
Query: 240 HVSTLVRCIKQSHPTVQTIVYPNKGVK 266
++ +K ++ IVYPN G +
Sbjct: 228 WTVDAIKSLKGVTDSI--IVYPNSGAE 252
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 156/317 (49%), Gaps = 19/317 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDGS ++ + + + LW++ L P+ + H D+ + + Y
Sbjct: 13 ILDGSMSTPL--EAMGEETSSDLWTAKALVDHPDRVYQVHYDYFKAGARITIT-NSYQAN 69
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
L ++Y G+ D DLI + + E ++A DY + + A S+GPYG
Sbjct: 70 LPAFAKY-GYSEDEAR--DLI---KKSAEIAIQARDDYEQAT--GVHNYVAGSVGPYGAY 121
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE- 445
L DG+EY G+Y +T + + +H P ++ LV+ G D LA+ET P +E LA++ +++
Sbjct: 122 LADGNEYRGNY--HLTPEEYVNFHAPRIDELVQGGADCLAIETQPKLEEVLAILDYVQKT 179
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 505
+P ++SFS KD S G ++ A + + Q+ A GVNC++ ++ +K
Sbjct: 180 YPALAVYVSFSLKDPQTISEGTSLTEAAQA--VQKYPQVFATGVNCMKLKWTVDAIKSLK 237
Query: 506 QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
++ IVYPN G +D KW+ D P W++ G I+GGCC V +I
Sbjct: 238 GVTDSI--IVYPNSGAEYDPQVKKWVYPPDAPDFGQAGPDWVKAGATIVGGCCTVMPADI 295
Query: 566 QQMRIMI-DEFNTKKND 581
Q++ + E N ++N+
Sbjct: 296 QKLAEAVKKETNQEENN 312
>gi|453063721|gb|EMF04699.1| homocysteine methyltransferase [Serratia marcescens VGH107]
Length = 312
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 151/303 (49%), Gaps = 15/303 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D PLWS+ L PE + H D+ + A + T
Sbjct: 18 ILDGALATELEARGCDLTD--PLWSAKVLIENPELIYQVHLDYFNAGAQCAITASYQATP 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+S +D LIA +V+ RA DYLA + A S+GPYG
Sbjct: 76 ----QGFSRRGLDQEQSLALIA---KSVQLAQRARGDYLAAHPQAAPLLIAGSVGPYGAY 128
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y + + D IA+HRP + AL AGVD LA ET+P+ E AL+ LL+EF
Sbjct: 129 LADGSEYRGDY--RLAQDDFIAFHRPRLAALAAAGVDLLACETLPSFAELQALLTLLQEF 186
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P AW +F+ +D H S G ++ V S L NP Q+ AIG+NC+ V+ +R +
Sbjct: 187 PTLGAWFAFTLRDSQHLSDGTPLTE-VLSALRGNP-QVLAIGINCIALDKVAPALRQLG- 243
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNIIGGCCEVTSYEI 565
+ +VYPN G +D+V W E+ S+ +W G +IGGCC T +I
Sbjct: 244 ALADKPLLVYPNSGEHYDAVSKTWHACGGEHGSLADQATEWRALGAQLIGGCCRTTPQDI 303
Query: 566 QQM 568
+ +
Sbjct: 304 RAI 306
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 136/261 (52%), Gaps = 26/261 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D PLWS+ L PE + H D+ AGA ++ YQA
Sbjct: 18 ILDGALATELEARGCDLTD--PLWSAKVLIENPELIYQVHLDYFNAGAQCAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETA-----AS 123
++ G ++++L L+ KSVQL A+ + L H + A S
Sbjct: 76 QGFSRRGLDQEQSLALIAKSVQLAQRARG--------------DYLAAHPQAAPLLIAGS 121
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G Y + + D IA+HRP + AL AGVD LA ET+P+ E AL
Sbjct: 122 VGPYGAYLADGSEYRGDY--RLAQDDFIAFHRPRLAALAAAGVDLLACETLPSFAELQAL 179
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
+ LL+EFP AW +F+ +D H S G ++ V S L NP Q+ AIG+NC+ V+
Sbjct: 180 LTLLQEFPTLGAWFAFTLRDSQHLSDGTPLTE-VLSALRGNP-QVLAIGINCIALDKVAP 237
Query: 244 LVRCIKQSHPTVQTIVYPNKG 264
+R + + +VYPN G
Sbjct: 238 ALRQLG-ALADKPLLVYPNSG 257
>gi|269797423|ref|YP_003311323.1| homocysteine S-methyltransferase [Veillonella parvula DSM 2008]
gi|269094052|gb|ACZ24043.1| homocysteine S-methyltransferase [Veillonella parvula DSM 2008]
Length = 341
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 142/278 (51%), Gaps = 32/278 (11%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R+ D+ H LWS+ L +P+ + H ++ AGADIIQSS YQA V
Sbjct: 22 VLDGALGTELERYGC-DIQ-HKLWSAKVLMDQPDIIKKIHISYLAAGADIIQSSGYQATV 79
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK-----------------ENQTPDINLNKTF 111
LGY +EA++L+ SV+L A+++ +TP+ +
Sbjct: 80 AGFKGLGYGTEEAIELVKLSVRLAVQARNEFLEAKASGALTLRGIKLGEETPEGVKYFSE 139
Query: 112 NLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 171
L + AAS+GPYG L DGSEY G Y D TE L +H P + D L+
Sbjct: 140 GALPKPL-VAASVGPYGAFLADGSEYRG-YPDVQTEY-LEVFHIPRLALFCEENPDILSF 196
Query: 172 ETIPAEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 228
ETIP+ EA+A+ + + + G AW++FSCKD H S GE I +P I
Sbjct: 197 ETIPSYAEAIAIARAMSDPFTSKGIPAWIAFSCKDGHHVSSGETIIKCAQMIDKVHP--I 254
Query: 229 QAIGVNCVRPSHVSTLVRCIK--QSHPTVQTIVYPNKG 264
IG+NC +P +V +L++ I+ P VYPN G
Sbjct: 255 TGIGINCTKPEYVESLIKDIRTVTDKPIA---VYPNLG 289
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 150/331 (45%), Gaps = 44/331 (13%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
+ K +LDG+ +++ R+ D+ H LWS+ L +P+ + H ++ +
Sbjct: 14 IIKEKDALVLDGALGTELERYGC-DIQ-HKLWSAKVLMDQPDIIKKIHISYLAAGADIIQ 71
Query: 319 SIGPYGTV-----LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA------------- 360
S G TV L G+E + V + A + +EA
Sbjct: 72 SSGYQATVAGFKGLGYGTEEAIELVKLSVRLAVQARNE-FLEAKASGALTLRGIKLGEET 130
Query: 361 --GVDYL---ALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVE 415
GV Y AL KP + AAS+GPYG L DGSEY G Y D TE L +H P +
Sbjct: 131 PEGVKYFSEGALPKPLV----AASVGPYGAFLADGSEYRG-YPDVQTEY-LEVFHIPRLA 184
Query: 416 ALVRAGVDYLALETIPAEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSA 472
D L+ ETIP+ EA+A+ + + + G AW++FSCKD H S GE I
Sbjct: 185 LFCEENPDILSFETIPSYAEAIAIARAMSDPFTSKGIPAWIAFSCKDGHHVSSGETIIKC 244
Query: 473 VTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK--QSHPTVQTIVYPNKGGVWDSVHMKW 530
+P I IG+NC +P +V +L++ I+ P VYPN G +DS W
Sbjct: 245 AQMIDKVHP--ITGIGINCTKPEYVESLIKDIRTVTDKPIA---VYPNLGESYDSKTKTW 299
Query: 531 LDTEDEYSILHYVPQWLEEGVNIIGGCCEVT 561
D S + YV W + G IIGGCC T
Sbjct: 300 YG--DAASFVDYVEVWRKAGAEIIGGCCRTT 328
>gi|322517183|ref|ZP_08070066.1| homocysteine S-methyltransferase [Streptococcus vestibularis ATCC
49124]
gi|322124242|gb|EFX95758.1| homocysteine S-methyltransferase [Streptococcus vestibularis ATCC
49124]
Length = 322
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 146/262 (55%), Gaps = 18/262 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
D+ G LWS+ YL +PE E H +I AGAD+I +S YQA + L + G +E+ A +
Sbjct: 36 DISGK-LWSAKYLLEKPEIIQEIHETYIAAGADLITTSSYQATLPGLVEAGLTEKAAEQI 94
Query: 85 LHKSVQLMNSAKDKENQTPD--INLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV 142
+ +V+L +A+DK D + + L++G +GPY L +GSEYSG Y
Sbjct: 95 IALTVRLAKAARDKVWVVLDETEKAKRPYPLISG------DVGPYAAYLANGSEYSGDY- 147
Query: 143 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-REFPGQKAWLSFSC 201
+T +L +HRP ++ L+ GVD LALETIP EA AL++LL EFP +A++SF+
Sbjct: 148 GQITIEELKDFHRPRIQILLDQGVDLLALETIPNRLEAQALIELLAEEFPEAEAYISFTV 207
Query: 202 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 261
++ S G + + L++ +QI A+G+NC P + + +K + + I YP
Sbjct: 208 QEPGTISDGTSLDE--IAKLVSQSNQILAVGINCSSPLLYNQALAILKNAGKVL--ITYP 263
Query: 262 NKGVKLLDGSFTSQVSRHTIKD 283
N G ++ DG+ SQ + KD
Sbjct: 264 NSG-EVYDGN--SQTWKTKDKD 282
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 144/308 (46%), Gaps = 34/308 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMT 342
D+ G LWS+ YL +PE E H +I G L S Y + +
Sbjct: 36 DISGK-LWSAKYLLEKPEIIQEIHETYIAA-----------GADLITTSSYQAT-LPGLV 82
Query: 343 EADLIAWHRPNVEAL----VRAGVDYLALIKPSISSQT------AASIGPYGTVLRDGSE 392
EA L + AL +A D + ++ + +GPY L +GSE
Sbjct: 83 EAGLTEKAAEQIIALTVRLAKAARDKVWVVLDETEKAKRPYPLISGDVGPYAAYLANGSE 142
Query: 393 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-REFPGQKA 451
YSG Y +T +L +HRP ++ L+ GVD LALETIP EA AL++LL EFP +A
Sbjct: 143 YSGDY-GQITIEELKDFHRPRIQILLDQGVDLLALETIPNRLEAQALIELLAEEFPEAEA 201
Query: 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTV 511
++SF+ ++ S G + + L++ +QI A+G+NC P + + +K + +
Sbjct: 202 YISFTVQEPGTISDGTSLDE--IAKLVSQSNQILAVGINCSSPLLYNQALAILKNAGKVL 259
Query: 512 QTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQW-LEEGVNIIGGCCEVTSYEIQQMR 569
I YPN G V+D W +D +++ + W GV I+GGCC +I +
Sbjct: 260 --ITYPNSGEVYDGNSQTWKTKDKDALTLVEHSKDWHAHFGVKILGGCCRTRPNDI---K 314
Query: 570 IMIDEFNT 577
+ EF T
Sbjct: 315 ALYQEFRT 322
>gi|379760975|ref|YP_005347372.1| homocysteine methyltransferase [Mycobacterium intracellulare
MOTT-64]
gi|378808917|gb|AFC53051.1| homocysteine methyltransferase [Mycobacterium intracellulare
MOTT-64]
Length = 295
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 128/261 (49%), Gaps = 30/261 (11%)
Query: 9 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
LLDG +++ H + D LWS+ L P V H + RAGA I ++ YQA
Sbjct: 2 LLDGGLATELEARGHDLSD----RLWSARLLADAPREIVAVHAAYFRAGATIATTASYQA 57
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G +E LL +SV+L +A+D+ LL AAS+GP
Sbjct: 58 SFEGFAARGLDRRETDLLLRRSVELAKAARDEAG---------AVGLL-----VAASVGP 103
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y ++ L WHRP +E L AG D LA ET+P EA ALV +
Sbjct: 104 YGAALADGSEYRGRY--GLSVGALARWHRPRLETLADAGADVLACETVPDVDEAEALVDV 161
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV-STLV 245
+R G AWLS++ D T G+ ++ A + A D+I A+GVNC P V +
Sbjct: 162 VRSV-GMPAWLSYTI-DGARTRAGQPLTEAFA--VAAGVDEIVAVGVNCCAPDDVLPAIA 217
Query: 246 RCIKQSHPTVQTIVYPNKGVK 266
K P IVYPN G +
Sbjct: 218 SASKIGKP---VIVYPNSGER 235
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 142/305 (46%), Gaps = 32/305 (10%)
Query: 267 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
LLDG +++ H + D LWS+ L P V H + R A+I
Sbjct: 2 LLDGGLATELEARGHDLSD----RLWSARLLADAPREIVAVHAAYFR----AGATIATTA 53
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
+ ++ +D E DL+ R +VE L +A D ++ AAS+GPYG
Sbjct: 54 SYQASFEGFAARGLDRR-ETDLL--LRRSVE-LAKAARDEAG----AVGLLVAASVGPYG 105
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
L DGSEY G Y ++ L WHRP +E L AG D LA ET+P EA ALV ++R
Sbjct: 106 AALADGSEYRGRY--GLSVGALARWHRPRLETLADAGADVLACETVPDVDEAEALVDVVR 163
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV-STLVRC 503
G AWLS++ D T G+ ++ A + A D+I A+GVNC P V +
Sbjct: 164 SV-GMPAWLSYTI-DGARTRAGQPLTEAFA--VAAGVDEIVAVGVNCCAPDDVLPAIASA 219
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
K P IVYPN G WD W+ + L QW+ G I+GGCC V
Sbjct: 220 SKIGKP---VIVYPNSGERWDG--RAWVGPRTFATEL--AAQWVSAGARIVGGCCRVGPA 272
Query: 564 EIQQM 568
+I ++
Sbjct: 273 DIAEL 277
>gi|418459543|ref|ZP_13030660.1| homocysteine methyltransferase [Saccharomonospora azurea SZMC
14600]
gi|359740364|gb|EHK89207.1| homocysteine methyltransferase [Saccharomonospora azurea SZMC
14600]
Length = 323
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 129/259 (49%), Gaps = 27/259 (10%)
Query: 12 GSFTSQVSRHTIKDVDGH----PLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQAN 67
G++ S T + GH LWS+ L PE V HR F AGA I ++ YQA+
Sbjct: 7 GAWVSDGGLATELEARGHDLSDALWSARLLLDAPEEIVAAHRAFFDAGAVIATTASYQAS 66
Query: 68 VDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPY 127
+ + G A LL +SV L A+D D++ + + AAS+GPY
Sbjct: 67 FEGFAERGIDRATATRLLRRSVDLARQARD------DVSGDGRPRFV------AASVGPY 114
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y +T A L WHRP +E L A D LA+ET+P EA ALV+ L
Sbjct: 115 GAALADGSEYRGAY--GLTVARLRDWHRPRLEVLAEARPDLLAIETVPDVVEAEALVEAL 172
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
G AWLSF+ D T G+ ++ A + +PD + A+GVNC PS VS + C
Sbjct: 173 AGI-GVPAWLSFTVADG-RTRAGQPLTEAF-AVAAGSPD-VAAVGVNCCAPSEVSPALAC 228
Query: 248 IKQ--SHPTVQTIVYPNKG 264
K P V VYPN G
Sbjct: 229 AKAVTGKPVV---VYPNSG 244
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 141/308 (45%), Gaps = 39/308 (12%)
Query: 262 NKGVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
G + DG +++ H + D LWS+ L PE V HR F
Sbjct: 5 GAGAWVSDGGLATELEARGHDLSDA----LWSARLLLDAPEEIVAAHRAFF--------- 51
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---- 375
G V+ + Y + + E + R L+R VD + +S
Sbjct: 52 --DAGAVIATTASYQASF-EGFAERGI---DRATATRLLRRSVDLARQARDDVSGDGRPR 105
Query: 376 -TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 434
AAS+GPYG L DGSEY G Y +T A L WHRP +E L A D LA+ET+P
Sbjct: 106 FVAASVGPYGAALADGSEYRGAY--GLTVARLRDWHRPRLEVLAEARPDLLAIETVPDVV 163
Query: 435 EALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
EA ALV+ L G AWLSF+ D T G+ ++ A + +PD + A+GVNC P
Sbjct: 164 EAEALVEALAGI-GVPAWLSFTVADG-RTRAGQPLTEAF-AVAAGSPD-VAAVGVNCCAP 219
Query: 495 SHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552
S VS + C K P V VYPN G WD+ W ++S +W+ EG +
Sbjct: 220 SEVSPALACAKAVTGKPVV---VYPNSGEGWDARRRAWTGAT-QFSP-RLAARWVAEGAH 274
Query: 553 IIGGCCEV 560
++GGCC V
Sbjct: 275 VVGGCCRV 282
>gi|256592586|gb|ACV03423.1| selenocysteine methyltransferase-like protein [Astragalus
drummondii]
Length = 337
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 140/272 (51%), Gaps = 26/272 (9%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ ++ G +++ RH D PLWS+ L + P + H D++ GADII ++ YQ
Sbjct: 15 RTAVIGGGLATELERHGADLND--PLWSAKCLLSSPHLIRQVHLDYLENGADIIITASYQ 72
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKD----KENQTPDINLNKTFNLLTGHIETA 121
A + G+S++E LL +SV++ A+D + ++ N + + L I A
Sbjct: 73 ATIQGFKAKGFSDEEGEALLRRSVEIAREARDLYYQRCAESSSDNGDDSRILKQRPILIA 132
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
S+G YG L DGSEYSG+Y D++ L +HR V+ L +GVD LA E +P + EA
Sbjct: 133 GSVGSYGAYLADGSEYSGNYGDAIKLETLKDFHRRRVQILADSGVDLLAFEAVPNKLEAQ 192
Query: 182 ALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVN 234
A LL E P AW +F+ KD T+ G+ I S SC D++ A+G+N
Sbjct: 193 AYADLLEEENIITP---AWFAFNSKDGTNVVSGDSIEECGSIAESC-----DKVVAVGIN 244
Query: 235 CVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKG 264
C P + L+ +K+ + P V +YPN G
Sbjct: 245 CTPPRFIHDLILLLKKVTAKPIV---IYPNSG 273
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 147/322 (45%), Gaps = 36/322 (11%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIE---------TA 317
++ G +++ RH D PLWS+ L + P + H D++ + T
Sbjct: 18 VIGGGLATELERHGADLND--PLWSAKCLLSSPHLIRQVHLDYLENGADIIITASYQATI 75
Query: 318 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA 377
G +G V+ EA + + R E+ G D L + I A
Sbjct: 76 QGFKAKGFSDEEGEALLRRSVEIAREARDLYYQRC-AESSSDNGDDSRILKQRPI--LIA 132
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
S+G YG L DGSEYSG+Y D++ L +HR V+ L +GVD LA E +P + EA
Sbjct: 133 GSVGSYGAYLADGSEYSGNYGDAIKLETLKDFHRRRVQILADSGVDLLAFEAVPNKLEAQ 192
Query: 438 ALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVN 490
A LL E P AW +F+ KD T+ G+ I S SC D++ A+G+N
Sbjct: 193 AYADLLEEENIITP---AWFAFNSKDGTNVVSGDSIEECGSIAESC-----DKVVAVGIN 244
Query: 491 CVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTED--EYSILHYVPQW 546
C P + L+ +K+ + P V +YPN G +D + +W + + YV +W
Sbjct: 245 CTPPRFIHDLILLLKKVTAKPIV---IYPNSGETYDGIRKEWGQNSGVTDEDFVSYVDKW 301
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
E G +++GGCC T I+ +
Sbjct: 302 CESGASLVGGCCRTTPDTIRGI 323
>gi|422862676|ref|ZP_16909308.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK408]
gi|327474149|gb|EGF19559.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK408]
Length = 315
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 141/262 (53%), Gaps = 20/262 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ +LDG+ +++ DV G LWS+ YL +P+ H ++RAG+DII +S YQ
Sbjct: 12 EIIILDGALGTELESRGY-DVSGK-LWSAQYLLDQPQIIQNVHESYVRAGSDIITTSSYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAAS 123
A++ + G + ++A DLL ++V L A + +P+ + + L+ G S
Sbjct: 70 ASIPAFVEAGLTPEKAYDLLKETVFLAQKAIENVWTGLSPEEQKQRPYPLVAG------S 123
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPY L DGSEY+G Y ++E + +HRP ++AL+ AG D LA+ET P EA A+
Sbjct: 124 VGPYAAYLADGSEYTGDY--QLSEEEFRDFHRPRIQALLEAGSDLLAIETTPNGAEAAAI 181
Query: 184 VKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++LL EFP +A+LSF + + S G I L Q+ A+G NC P ++
Sbjct: 182 LRLLAEEFPQAEAYLSFVAQSENAISDGTKIEE--LGNLAQESPQVLAVGFNCTAPHLIA 239
Query: 243 TLVRCIKQ--SHPTVQTIVYPN 262
L+ + Q + P + YPN
Sbjct: 240 PLLDGLGQVCNKP---FLTYPN 258
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 145/318 (45%), Gaps = 35/318 (11%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ +LDG+ +++ DV G LWS+ YL +P+ H ++R G
Sbjct: 13 IIILDGALGTELESRGY-DVSGK-LWSAQYLLDQPQIIQNVHESYVRA-----------G 59
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWH-----RPNVEALVRAGVDYLALIKPSISSQ---- 375
+ + S Y + + EA L + V +A + + P Q
Sbjct: 60 SDIITTSSYQAS-IPAFVEAGLTPEKAYDLLKETVFLAQKAIENVWTGLSPEEQKQRPYP 118
Query: 376 -TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 434
A S+GPY L DGSEY+G Y ++E + +HRP ++AL+ AG D LA+ET P
Sbjct: 119 LVAGSVGPYAAYLADGSEYTGDY--QLSEEEFRDFHRPRIQALLEAGSDLLAIETTPNGA 176
Query: 435 EALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
EA A+++LL EFP +A+LSF + + S G I L Q+ A+G NC
Sbjct: 177 EAAAILRLLAEEFPQAEAYLSFVAQSENAISDGTKIEE--LGNLAQESPQVLAVGFNCTA 234
Query: 494 PSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTE-DEYSILHYVPQWLEEG 550
P ++ L+ + Q + P + YPN ++ + W D E S+L W +G
Sbjct: 235 PHLIAPLLDGLGQVCNKP---FLTYPNSSETYNGLTKTWHDDPVQERSLLENSKLWQNQG 291
Query: 551 VNIIGGCCEVTSYEIQQM 568
V + GGCC +I Q+
Sbjct: 292 VRLFGGCCRTRPEDIDQL 309
>gi|381163582|ref|ZP_09872812.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Saccharomonospora azurea
NA-128]
gi|379255487|gb|EHY89413.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Saccharomonospora azurea
NA-128]
Length = 300
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 148/318 (46%), Gaps = 38/318 (11%)
Query: 263 KGVKLLD-GSFTSQVSRHTIKDVDGH----PLWSSVYLTTEPEACVETHRDFIRGHIETA 317
+GV+L G++ + T + GH LWS+ L PE V HR F
Sbjct: 5 EGVELFGAGAWVNDGGLATELEARGHDLSDALWSARLLLDAPEEIVAAHRAFFDA----- 59
Query: 318 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-- 375
G V+ + Y + + E + R L+R VD + +S
Sbjct: 60 ------GAVIATTASYQASF-EGFAERGI---DRATATRLLRRSVDLARQARDDVSGDGR 109
Query: 376 ---TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA 432
AAS+GPYG L DGSEY G Y +T A L WHRP +E L A D LA+ET+P
Sbjct: 110 PRFVAASVGPYGAALADGSEYRGAY--GLTVARLRDWHRPRLEVLAEARPDLLAIETVPD 167
Query: 433 EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 492
EA ALV+ L G AWLSF+ D T G+ ++ A + +PD + A+GVNC
Sbjct: 168 VVEAEALVEALAGI-GVPAWLSFTVADG-RTRAGQPLAEAF-AVAAGSPD-VAAVGVNCC 223
Query: 493 RPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEG 550
PS VS + C K P V VYPN G WD+ W ++S +W+ EG
Sbjct: 224 APSDVSPALACAKAVTGKPVV---VYPNSGEGWDARRRAWTGAT-QFSP-RLAARWVAEG 278
Query: 551 VNIIGGCCEVTSYEIQQM 568
+++GGCC V +I ++
Sbjct: 279 AHVVGGCCRVRPADIAEL 296
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 129/258 (50%), Gaps = 29/258 (11%)
Query: 11 DGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
DG +++ H + D LWS+ L PE V HR F AGA I ++ YQA+
Sbjct: 18 DGGLATELEARGHDLSDA----LWSARLLLDAPEEIVAAHRAFFDAGAVIATTASYQASF 73
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ + G A LL +SV L A+D D++ + + AAS+GPYG
Sbjct: 74 EGFAERGIDRATATRLLRRSVDLARQARD------DVSGDGRPRFV------AASVGPYG 121
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y +T A L WHRP +E L A D LA+ET+P EA ALV+ L
Sbjct: 122 AALADGSEYRGAY--GLTVARLRDWHRPRLEVLAEARPDLLAIETVPDVVEAEALVEALA 179
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
G AWLSF+ D T G+ ++ A + +PD + A+GVNC PS VS + C
Sbjct: 180 GI-GVPAWLSFTVADG-RTRAGQPLAEAF-AVAAGSPD-VAAVGVNCCAPSDVSPALACA 235
Query: 249 KQ--SHPTVQTIVYPNKG 264
K P V VYPN G
Sbjct: 236 KAVTGKPVV---VYPNSG 250
>gi|335356513|ref|ZP_08548383.1| homocysteine methyltransferase [Lactobacillus animalis KCTC 3501]
Length = 309
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 143/262 (54%), Gaps = 21/262 (8%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ +LDGS + + I D G LW++ L+ EA + H ++ AGA +I + YQA
Sbjct: 9 IHVLDGSMAAALKEQGI-DSTGE-LWTAQALSDNIEAVYDAHYSYLAAGAQMILTDTYQA 66
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK-ENQTPDINLNKTFNLLTGHIETAASIG 125
N+ K G+S+Q+A +L+ +V + A+D E QT H AASIG
Sbjct: 67 NLQAFEKAGHSKQQAENLVGMAVLVAQKARDDYEEQTGK------------HALVAASIG 114
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY G Y+ + +A + +H P + A++ D LALET P E LAL++
Sbjct: 115 PYGAYLADGSEYRGDYL--LNDAQYLNFHLPRLTAVLAQAPDCLALETQPKLSEPLALLR 172
Query: 186 LL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
L + P ++SF+ +D+ S G + AV + ++ +Q+ AIGVNC+ P VS
Sbjct: 173 WLEKNVPQMPVYVSFTLRDEMTLSDGTELKRAVAA--ISKFEQVFAIGVNCIVPELVSGA 230
Query: 245 VRCIKQSHPTVQTIVYPNKGVK 266
++ ++Q+ T + IVYPN G +
Sbjct: 231 LKVMRQA-TTKKLIVYPNLGAQ 251
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 157/325 (48%), Gaps = 30/325 (9%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
+ + +LDGS + + I D G LW++ L+ EA + H ++ + +
Sbjct: 7 ENIHVLDGSMAAALKEQGI-DSTGE-LWTAQALSDNIEAVYDAHYSYLAAGAQMILT-DT 63
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT------ 376
Y L+ E +GH + E LV V + QT
Sbjct: 64 YQANLQ-AFEKAGH-------------SKQQAENLVGMAVLVAQKARDDYEEQTGKHALV 109
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
AASIGPYG L DGSEY G Y+ + +A + +H P + A++ D LALET P E
Sbjct: 110 AASIGPYGAYLADGSEYRGDYL--LNDAQYLNFHLPRLTAVLAQAPDCLALETQPKLSEP 167
Query: 437 LALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
LAL++ L + P ++SF+ +D+ S G + AV + ++ +Q+ AIGVNC+ P
Sbjct: 168 LALLRWLEKNVPQMPVYVSFTLRDEMTLSDGTELKRAVAA--ISKFEQVFAIGVNCIVPE 225
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
VS ++ ++Q+ T + IVYPN G +D W +E + +W + G +IIG
Sbjct: 226 LVSGALKVMRQA-TTKKLIVYPNLGAQYDPETKTWAKSEQQLDFTQLTEKWYQAGASIIG 284
Query: 556 GCCEVTSYEIQQMRIMIDEFNTKKN 580
GCC TS +I Q+ +++ K+N
Sbjct: 285 GCCMTTSPQISQIATYFEQYQ-KEN 308
>gi|312863919|ref|ZP_07724157.1| homocysteine S-methyltransferase [Streptococcus vestibularis F0396]
gi|311101455|gb|EFQ59660.1| homocysteine S-methyltransferase [Streptococcus vestibularis F0396]
Length = 316
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 146/262 (55%), Gaps = 18/262 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
D+ G LWS+ YL +PE E H +I AGAD+I +S YQA + L + G +E+ A +
Sbjct: 30 DISGK-LWSAKYLLEKPEIIQEIHETYIAAGADLITTSSYQATLPGLVEAGLTEKAAEQI 88
Query: 85 LHKSVQLMNSAKDKENQTPD--INLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV 142
+ +V+L +A+DK D + + L++G +GPY L +GSEYSG Y
Sbjct: 89 IALTVRLAKAARDKVWVVLDETEKAKRPYPLISG------DVGPYAAYLANGSEYSGDY- 141
Query: 143 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-REFPGQKAWLSFSC 201
+T +L +HRP ++ L+ GVD LALETIP EA AL++LL EFP +A++SF+
Sbjct: 142 GQITIEELKDFHRPRIQILLDQGVDLLALETIPNRLEAQALIELLAEEFPEAEAYISFTV 201
Query: 202 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 261
++ S G + + L++ +QI A+G+NC P + + +K + + I YP
Sbjct: 202 QEPGTISDGTSLDE--IAKLVSQSNQILAVGINCSSPLLYNQALAILKNAGKVL--ITYP 257
Query: 262 NKGVKLLDGSFTSQVSRHTIKD 283
N G ++ DG+ SQ + KD
Sbjct: 258 NSG-EVYDGN--SQTWKTKDKD 276
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 144/308 (46%), Gaps = 34/308 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMT 342
D+ G LWS+ YL +PE E H +I G L S Y + +
Sbjct: 30 DISGK-LWSAKYLLEKPEIIQEIHETYIAA-----------GADLITTSSYQAT-LPGLV 76
Query: 343 EADLIAWHRPNVEAL----VRAGVDYLALIKPSISSQT------AASIGPYGTVLRDGSE 392
EA L + AL +A D + ++ + +GPY L +GSE
Sbjct: 77 EAGLTEKAAEQIIALTVRLAKAARDKVWVVLDETEKAKRPYPLISGDVGPYAAYLANGSE 136
Query: 393 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-REFPGQKA 451
YSG Y +T +L +HRP ++ L+ GVD LALETIP EA AL++LL EFP +A
Sbjct: 137 YSGDY-GQITIEELKDFHRPRIQILLDQGVDLLALETIPNRLEAQALIELLAEEFPEAEA 195
Query: 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTV 511
++SF+ ++ S G + + L++ +QI A+G+NC P + + +K + +
Sbjct: 196 YISFTVQEPGTISDGTSLDE--IAKLVSQSNQILAVGINCSSPLLYNQALAILKNAGKVL 253
Query: 512 QTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQW-LEEGVNIIGGCCEVTSYEIQQMR 569
I YPN G V+D W +D +++ + W GV I+GGCC +I +
Sbjct: 254 --ITYPNSGEVYDGNSQTWKTKDKDALTLVEHSKDWHAHFGVKILGGCCRTRPNDI---K 308
Query: 570 IMIDEFNT 577
+ EF T
Sbjct: 309 ALYQEFRT 316
>gi|307193334|gb|EFN76196.1| Homocysteine S-methyltransferase [Harpegnathos saltator]
Length = 346
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 143/282 (50%), Gaps = 18/282 (6%)
Query: 9 LLDGSFTSQVSRHTIK-DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQAN 67
+LDG F SQ + + K +D P S + T +TH F+RAGA++I+++ Y+ +
Sbjct: 7 VLDGDFISQTAANMGKTSIDDLP--SILATVTNESTMFDTHLAFLRAGANMIRTNTYRTS 64
Query: 68 VDNLTK-LGYSEQEALDLLHKSVQ------LMNSAKDKENQTPDINLNKTFNLLTGHIET 120
V NL LG + + ++ K+ L + ++ + T +KT + G
Sbjct: 65 VYNLNHFLGINVNNSASVITKAAMAARKAVLTHHSETSNDPTNQEVFHKTRPWIVG---- 120
Query: 121 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 180
S GPYG L DG+EY+G Y ++ DLI WH P V AL+ AGVD L+L ++P KEA
Sbjct: 121 --SCGPYGASLGDGTEYTGAYAKHLSLEDLIDWHEPRVRALLDAGVDMLSLGSVPCAKEA 178
Query: 181 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 240
A V+L+R FP + W+SF C +D + G V C DQ+ AIGV+CV S
Sbjct: 179 AAFVELMRNFPSTRVWISFYCYNDRILADGSNFRKIVKHCYNRLGDQMIAIGVSCVESSL 238
Query: 241 VSTLVRCI-KQSHP-TVQTIVYPNKGVKLLDGSFTSQVSRHT 280
V L I ++ P + +V P+K FT + + T
Sbjct: 239 VKPLFNIINREIFPRKIPLLVCPDKTTYRFKEDFTMETTGTT 280
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 78/142 (54%), Gaps = 7/142 (4%)
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
S GPYG L DG+EY+G Y ++ DLI WH P V AL+ AGVD L+L ++P KEA
Sbjct: 120 GSCGPYGASLGDGTEYTGAYAKHLSLEDLIDWHEPRVRALLDAGVDMLSLGSVPCAKEAA 179
Query: 438 ALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
A V+L+R FP + W+SF C +D + G V C DQ+ AIGV+CV S V
Sbjct: 180 AFVELMRNFPSTRVWISFYCYNDRILADGSNFRKIVKHCYNRLGDQMIAIGVSCVESSLV 239
Query: 498 STLVRCIKQSHPTVQTIVYPNK 519
L I + ++P K
Sbjct: 240 KPLFNIINRE-------IFPRK 254
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 318 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA 377
S GPYG L DG+EY+G Y ++ DLI WH P V AL+ AGVD L+L + + A
Sbjct: 120 GSCGPYGASLGDGTEYTGAYAKHLSLEDLIDWHEPRVRALLDAGVDMLSLGSVPCAKEAA 179
Query: 378 ASI 380
A +
Sbjct: 180 AFV 182
>gi|325929571|ref|ZP_08190685.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Xanthomonas perforans
91-118]
gi|346724291|ref|YP_004850960.1| homocysteine methyltransferase [Xanthomonas axonopodis pv.
citrumelo F1]
gi|325540081|gb|EGD11709.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Xanthomonas perforans
91-118]
gi|346649038|gb|AEO41662.1| homocysteine methyltransferase [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 321
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 160/333 (48%), Gaps = 30/333 (9%)
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE 300
++ L R + + P Q + + G +LDG+ +++ + D LWS+ L +PE
Sbjct: 1 MTILPRQPRANAPFSQALQH--DGYVVLDGALATELEQRGCDLNDA--LWSARVLMEQPE 56
Query: 301 ACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 360
+ HRD+ + A + T L ++ +D+ LIA +V +A
Sbjct: 57 LIYQVHRDYFAAGAQCAITASYQATPL----GFAARGLDAAQAQALIA---RSVALAAQA 109
Query: 361 GVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 420
D+L L + A S+GPYG L DGSEY G YV + + L+ +HRP + AL A
Sbjct: 110 RADHLTLHPYAAPLWVAGSVGPYGAYLADGSEYRGDYVLPIEQ--LMDFHRPRIAALAEA 167
Query: 421 GVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 479
GVD LA ET+P+ E +AL +LL+ EFP AW SF+ +D H S G ++ V + L
Sbjct: 168 GVDLLACETLPSASEIVALRQLLQHEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LD 225
Query: 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-------LD 532
Q+ A+G+NC+ S + + + +VYPN G +D+ +W L
Sbjct: 226 ACAQVIAVGINCIALDQASAALHSLAALT-ALPLVVYPNSGEHYDASDKRWHAGHGAALT 284
Query: 533 TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
D+++ WL G +IGGCC +I
Sbjct: 285 LADQHA------HWLAAGARLIGGCCRTAPRDI 311
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 129/257 (50%), Gaps = 17/257 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + D LWS+ L +PE + HRD+ AGA ++ YQA
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G +A L+ +SV L A+ + T + + A S+GPYG
Sbjct: 83 LGFAARGLDAAQAQALIARSVALAAQARAD---------HLTLHPYAAPLWVAGSVGPYG 133
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G YV + + L+ +HRP + AL AGVD LA ET+P+ E +AL +LL+
Sbjct: 134 AYLADGSEYRGDYVLPIEQ--LMDFHRPRIAALAEAGVDLLACETLPSASEIVALRQLLQ 191
Query: 189 -EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP AW SF+ +D H S G ++ V + L Q+ A+G+NC+ S +
Sbjct: 192 HEFPQLHAWFSFTLRDAAHLSDGTPLAQVVPA--LDACAQVIAVGINCIALDQASAALHS 249
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + +VYPN G
Sbjct: 250 LAALT-ALPLVVYPNSG 265
>gi|428149023|ref|ZP_18996858.1| Homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|427540999|emb|CCM92996.1| Homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 193
Score = 140 bits (353), Expect = 2e-30, Method: Composition-based stats.
Identities = 80/197 (40%), Positives = 111/197 (56%), Gaps = 14/197 (7%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S+GPYG L DGSEY G Y S A+ A+HRP VEAL+ AG D LA ET+P+ E
Sbjct: 2 AGSVGPYGAFLADGSEYRGDYQRS--AAEFQAFHRPRVEALLDAGADLLACETLPSFAEI 59
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV---- 492
AL LL+E+P +AW SF+ +D H S G + + + LA+ Q+ A+G+NC+
Sbjct: 60 QALAALLQEYPRARAWYSFTLRDAEHLSDGTPLREVMAA--LADNPQVVAVGINCIALEN 117
Query: 493 RPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQWLEEGV 551
P+ ++ L S + +VYPN G +D+V W E S+ Y+PQWL G
Sbjct: 118 TPAALAHL-----HSLTALPLVVYPNSGEHYDAVSKTWHHHGEACASLADYLPQWLAAGA 172
Query: 552 NIIGGCCEVTSYEIQQM 568
+IGGCC T +I +
Sbjct: 173 KLIGGCCRTTPKDIAAL 189
Score = 108 bits (270), Expect = 8e-21, Method: Composition-based stats.
Identities = 62/148 (41%), Positives = 86/148 (58%), Gaps = 13/148 (8%)
Query: 121 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 180
A S+GPYG L DGSEY G Y S A+ A+HRP VEAL+ AG D LA ET+P+ E
Sbjct: 2 AGSVGPYGAFLADGSEYRGDYQRS--AAEFQAFHRPRVEALLDAGADLLACETLPSFAEI 59
Query: 181 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV---- 236
AL LL+E+P +AW SF+ +D H S G + + + LA+ Q+ A+G+NC+
Sbjct: 60 QALAALLQEYPRARAWYSFTLRDAEHLSDGTPLREVMAA--LADNPQVVAVGINCIALEN 117
Query: 237 RPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
P+ ++ L S + +VYPN G
Sbjct: 118 TPAALAHL-----HSLTALPLVVYPNSG 140
Score = 62.0 bits (149), Expect = 9e-07, Method: Composition-based stats.
Identities = 53/141 (37%), Positives = 69/141 (48%), Gaps = 20/141 (14%)
Query: 317 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL-IKPSISS- 374
A S+GPYG L DGSEY G Y S A+ A+HRP VEAL+ AG D LA PS +
Sbjct: 2 AGSVGPYGAFLADGSEYRGDYQRS--AAEFQAFHRPRVEALLDAGADLLACETLPSFAEI 59
Query: 375 QTAASI--------GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 426
Q A++ Y LRD H D +++A N + +V G++ +A
Sbjct: 60 QALAALLQEYPRARAWYSFTLRDAE----HLSDGTPLREVMAALADNPQ-VVAVGINCIA 114
Query: 427 LETIPAEKEALALVKLLREFP 447
LE PA ALA + L P
Sbjct: 115 LENTPA---ALAHLHSLTALP 132
>gi|294794963|ref|ZP_06760098.1| homocysteine S-methyltransferase [Veillonella sp. 3_1_44]
gi|294454325|gb|EFG22699.1| homocysteine S-methyltransferase [Veillonella sp. 3_1_44]
Length = 337
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 143/277 (51%), Gaps = 30/277 (10%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R+ D+ H LWS+ L +P+ + H ++ AGADIIQSS YQA V
Sbjct: 18 VLDGALGTELERYGC-DIQ-HKLWSAKVLMDQPDIIKKIHISYLAAGADIIQSSGYQATV 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIET-------- 120
LGY +EA++L+ SV+L A++ E + T +T ET
Sbjct: 76 AGFKGLGYGTEEAIELVKLSVRLAVQARN-EFLEAKASGALTLRGITLGEETPKGIRYFS 134
Query: 121 ---------AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 171
AAS+GPYG L DGSEY G Y D TE L +H P + D L+
Sbjct: 135 EGALPKPLVAASVGPYGAFLADGSEYRG-YPDVQTEY-LEVFHIPRLALFCEENPDILSF 192
Query: 172 ETIPAEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 228
ETIP+ EA+A+ + + + G AW++FSCKD H S GE I +P I
Sbjct: 193 ETIPSYAEAIAIARAMSDPFTSKGIPAWIAFSCKDGHHVSSGETIIKCAQMIDKVHP--I 250
Query: 229 QAIGVNCVRPSHVSTLVRCIKQSHPTVQTI-VYPNKG 264
IG+NC +P +V +L++ I+ T + I VYPN G
Sbjct: 251 TGIGINCSKPEYVESLIKDIRTV--TDKPIAVYPNLG 285
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 154/329 (46%), Gaps = 40/329 (12%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
+ KG +LDG+ +++ R+ D+ H LWS+ L +P+ + H ++ +
Sbjct: 10 IIKEKGALVLDGALGTELERYGC-DIQ-HKLWSAKVLMDQPDIIKKIHISYLAAGADIIQ 67
Query: 319 SIGPYGTV-----LRDGSEYSGHYVDSMTEADLIAWH-----RPNVEALVRA-------- 360
S G TV L G+E + V + A + + + +R
Sbjct: 68 SSGYQATVAGFKGLGYGTEEAIELVKLSVRLAVQARNEFLEAKASGALTLRGITLGEETP 127
Query: 361 -GVDYL---ALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA 416
G+ Y AL KP + AAS+GPYG L DGSEY G Y D TE L +H P +
Sbjct: 128 KGIRYFSEGALPKPLV----AASVGPYGAFLADGSEYRG-YPDVQTEY-LEVFHIPRLAL 181
Query: 417 LVRAGVDYLALETIPAEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSAV 473
D L+ ETIP+ EA+A+ + + + G AW++FSCKD H S GE I
Sbjct: 182 FCEENPDILSFETIPSYAEAIAIARAMSDPFTSKGIPAWIAFSCKDGHHVSSGETIIKCA 241
Query: 474 TSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTI-VYPNKGGVWDSVHMKWLD 532
+P I IG+NC +P +V +L++ I+ T + I VYPN G +DS W
Sbjct: 242 QMIDKVHP--ITGIGINCSKPEYVESLIKDIRTV--TDKPIAVYPNLGESYDSKTKTWYG 297
Query: 533 TEDEYSILHYVPQWLEEGVNIIGGCCEVT 561
D S + YV W + G IIGGCC T
Sbjct: 298 --DAASFVDYVEVWRKAGAEIIGGCCRTT 324
>gi|406029911|ref|YP_006728802.1| Homocysteine S-methyltransferase [Mycobacterium indicus pranii MTCC
9506]
gi|405128458|gb|AFS13713.1| Homocysteine S-methyltransferase [Mycobacterium indicus pranii MTCC
9506]
Length = 295
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 128/261 (49%), Gaps = 30/261 (11%)
Query: 9 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
LLDG +++ H + D LWS+ L P V H + RAGA I ++ YQA
Sbjct: 2 LLDGGLATELEARGHDLSDR----LWSARLLADAPREIVAVHAAYFRAGATIATTASYQA 57
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G +E LL +SV+L +A+D+ LL AAS+GP
Sbjct: 58 SFEGFAARGLDRRETDLLLRRSVELAKAARDEAG---------AVGLL-----VAASVGP 103
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y ++ L WHRP +E L AG D LA ET+P EA ALV +
Sbjct: 104 YGAALADGSEYRGRY--GLSVGALARWHRPRLETLADAGADVLACETVPDVDEAEALVDV 161
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP-SHVSTLV 245
+R G AWLS++ D T G+ ++ A + A D+I A+GVNC P + +
Sbjct: 162 VRSV-GMPAWLSYTI-DGARTRAGQPLTEAFA--VAAGVDEIVAVGVNCCAPDDQLPAIA 217
Query: 246 RCIKQSHPTVQTIVYPNKGVK 266
K P IVYPN G +
Sbjct: 218 SASKIGKP---VIVYPNSGER 235
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 142/305 (46%), Gaps = 32/305 (10%)
Query: 267 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
LLDG +++ H + D LWS+ L P V H + R A+I
Sbjct: 2 LLDGGLATELEARGHDLSDR----LWSARLLADAPREIVAVHAAYFR----AGATIATTA 53
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
+ ++ +D E DL+ R +VE L +A D ++ AAS+GPYG
Sbjct: 54 SYQASFEGFAARGLDRR-ETDLL--LRRSVE-LAKAARDEAG----AVGLLVAASVGPYG 105
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
L DGSEY G Y ++ L WHRP +E L AG D LA ET+P EA ALV ++R
Sbjct: 106 AALADGSEYRGRY--GLSVGALARWHRPRLETLADAGADVLACETVPDVDEAEALVDVVR 163
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP-SHVSTLVRC 503
G AWLS++ D T G+ ++ A + A D+I A+GVNC P + +
Sbjct: 164 SV-GMPAWLSYTI-DGARTRAGQPLTEAFA--VAAGVDEIVAVGVNCCAPDDQLPAIASA 219
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
K P IVYPN G WD W+ + L QW+ G I+GGCC V
Sbjct: 220 SKIGKP---VIVYPNSGERWDG--RAWVGPRTFATEL--AAQWVSAGARIVGGCCRVGPA 272
Query: 564 EIQQM 568
+I ++
Sbjct: 273 DIAEL 277
>gi|125717926|ref|YP_001035059.1| homocysteine methyltransferase [Streptococcus sanguinis SK36]
gi|125497843|gb|ABN44509.1| Methyltransferase, putative [Streptococcus sanguinis SK36]
Length = 315
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 144/264 (54%), Gaps = 20/264 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ +LDG+ +++ DV G LWS+ YL +P+ H ++RAG+DII +S YQ
Sbjct: 12 EIIILDGALGTELESLGY-DVSGK-LWSAQYLLDQPQIIQNVHESYVRAGSDIITTSSYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQ--TPDINLNKTFNLLTGHIETAAS 123
A++ + G + +++ DLL ++V L A + Q +P+ N+ LL A S
Sbjct: 70 ASIPAFVEAGLTPEKSYDLLKETVFLARKAIENTWQALSPE-EKNQRPRLL-----VAGS 123
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPY L DGSEY+G Y ++E + +HRP ++AL+ AG D LA+ETIP EA A+
Sbjct: 124 VGPYAAYLADGSEYTGDY--QLSEEEFQDFHRPRIQALLEAGSDLLAIETIPNGAEAEAI 181
Query: 184 VKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++LL EFP +A+LSF + + S G I L Q+ +G NC P ++
Sbjct: 182 LRLLAEEFPQAEAYLSFVAQSENAISDGTKIEE--LGNLAQESPQVLTVGFNCTAPHLIA 239
Query: 243 TLVRCIKQ--SHPTVQTIVYPNKG 264
L+ ++Q + P + YPN G
Sbjct: 240 PLLDGLRQVCNKP---FLTYPNSG 260
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 151/316 (47%), Gaps = 31/316 (9%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIG 321
+ +LDG+ +++ DV G LWS+ YL +P+ H ++R I T++
Sbjct: 13 IIILDGALGTELESLGY-DVSGK-LWSAQYLLDQPQIIQNVHESYVRAGSDIITTSSYQA 70
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-----T 376
+ G Y D + E +A R +E +A + P +Q
Sbjct: 71 SIPAFVEAGLTPEKSY-DLLKETVFLA--RKAIENTWQA-------LSPEEKNQRPRLLV 120
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S+GPY L DGSEY+G Y ++E + +HRP ++AL+ AG D LA+ETIP EA
Sbjct: 121 AGSVGPYAAYLADGSEYTGDY--QLSEEEFQDFHRPRIQALLEAGSDLLAIETIPNGAEA 178
Query: 437 LALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
A+++LL EFP +A+LSF + + S G I L Q+ +G NC P
Sbjct: 179 EAILRLLAEEFPQAEAYLSFVAQSENAISDGTKIEE--LGNLAQESPQVLTVGFNCTAPH 236
Query: 496 HVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQWLEEGVN 552
++ L+ ++Q + P + YPN G ++ + W D E E S+L W +GV
Sbjct: 237 LIAPLLDGLRQVCNKP---FLTYPNSGETYNGLTKIWHNDPEQERSLLENSKLWQNQGVR 293
Query: 553 IIGGCCEVTSYEIQQM 568
+ GGCC +I Q+
Sbjct: 294 LFGGCCRTQPEDIAQL 309
>gi|285019246|ref|YP_003376957.1| homocysteine s-methyltransferase [Xanthomonas albilineans GPE PC73]
gi|283474464|emb|CBA16965.1| probable homocysteine s-methyltransferase protein [Xanthomonas
albilineans GPE PC73]
Length = 316
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 152/310 (49%), Gaps = 29/310 (9%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ R D+D PLWS+ L +PE + H D+ + A + T+
Sbjct: 19 VLDGALATELERFGC-DLD-DPLWSAKVLLEQPERIRQVHLDYFVAGAQCAITASYQATL 76
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+ +D LIA + E +A DY A + + A S+GPYG
Sbjct: 77 ----QGLAARGIDPAQARRLIAR---SAELAQQARRDYRAAHPQAGTLLVAGSVGPYGAY 129
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G YV + A + +HRP + ALV AGVD LA ET P+ E AL+ LL EF
Sbjct: 130 LADGSEYRGDYV--VAPARMRDFHRPRITALVDAGVDLLAFETQPSSAEIAALLALLEEF 187
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV-------RPSHVST 499
P AW + + +D TH S G + V LL Q+ A+GVNC+ H+ST
Sbjct: 188 PQSVAWFACTLRDPTHLSDGTPLRETVA--LLDGHPQVVALGVNCIAPALAAAALEHLST 245
Query: 500 LVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQWLEEGVNIIGGCC 558
L R + +VYPN G +D+ +W D +++ ++ +W G +IGGCC
Sbjct: 246 LTR--------LPLVVYPNSGERYDAGDKRWKADGAVACALVEHIDRWRAAGARLIGGCC 297
Query: 559 EVTSYEIQQM 568
T +I Q+
Sbjct: 298 RTTPQQIAQL 307
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 134/269 (49%), Gaps = 32/269 (11%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ +LDG+ +++ R D+D PLWS+ L +PE + H D+ AGA ++ YQ
Sbjct: 16 RCIVLDGALATELERFGC-DLD-DPLWSAKVLLEQPERIRQVHLDYFVAGAQCAITASYQ 73
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASI 124
A + L G +A L+ +S +L A+ D P G + A S+
Sbjct: 74 ATLQGLAARGIDPAQARRLIARSAELAQQARRDYRAAHPQ----------AGTLLVAGSV 123
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSEY G YV + A + +HRP + ALV AGVD LA ET P+ E AL+
Sbjct: 124 GPYGAYLADGSEYRGDYV--VAPARMRDFHRPRITALVDAGVDLLAFETQPSSAEIAALL 181
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV-------R 237
LL EFP AW + + +D TH S G + V LL Q+ A+GVNC+
Sbjct: 182 ALLEEFPQSVAWFACTLRDPTHLSDGTPLRETVA--LLDGHPQVVALGVNCIAPALAAAA 239
Query: 238 PSHVSTLVRCIKQSHPTVQTIVYPNKGVK 266
H+STL R + +VYPN G +
Sbjct: 240 LEHLSTLTR--------LPLVVYPNSGER 260
>gi|323351642|ref|ZP_08087296.1| homocysteine S-methyltransferase [Streptococcus sanguinis VMC66]
gi|322122128|gb|EFX93854.1| homocysteine S-methyltransferase [Streptococcus sanguinis VMC66]
Length = 315
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 144/264 (54%), Gaps = 20/264 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ +LDG+ +++ + DV G LWS+ YL +P + H ++RAG+DII +S YQ
Sbjct: 12 EIIILDGALGTELESLSY-DVSGK-LWSAQYLLDQPRIIQDVHESYVRAGSDIITTSSYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAAS 123
A++ + G + ++ DLL ++V L A + +P+ + L+ G S
Sbjct: 70 ASIPAFIEAGLTPEKGYDLLKETVFLAQKAIENVWTGLSPEEQKQRPCPLVAG------S 123
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPY L DGSEY+G+Y ++E + +HRP ++AL+ AG D LA+ETIP EA A+
Sbjct: 124 VGPYAAYLADGSEYTGNY--QLSEEEYRDFHRPRIQALLEAGSDLLAIETIPNGVEAAAI 181
Query: 184 VKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++LL EFP +A+LSF + + S G I L Q+ A+G NC P ++
Sbjct: 182 LRLLAEEFPQAEAYLSFVAQSENAISDGTKIEE--LGNLAQESPQVLAVGFNCTAPHLIA 239
Query: 243 TLVRCIKQ--SHPTVQTIVYPNKG 264
+L+ + Q + P + YPN G
Sbjct: 240 SLLGELGQVCNKP---FLTYPNSG 260
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 151/316 (47%), Gaps = 31/316 (9%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIG 321
+ +LDG+ +++ + DV G LWS+ YL +P + H ++R I T++
Sbjct: 13 IIILDGALGTELESLSY-DVSGK-LWSAQYLLDQPRIIQDVHESYVRAGSDIITTSSYQA 70
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-----T 376
+ G Y D + E +A +A + + P Q
Sbjct: 71 SIPAFIEAGLTPEKGY-DLLKETVFLAQ---------KAIENVWTGLSPEEQKQRPCPLV 120
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S+GPY L DGSEY+G+Y ++E + +HRP ++AL+ AG D LA+ETIP EA
Sbjct: 121 AGSVGPYAAYLADGSEYTGNY--QLSEEEYRDFHRPRIQALLEAGSDLLAIETIPNGVEA 178
Query: 437 LALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
A+++LL EFP +A+LSF + + S G I L Q+ A+G NC P
Sbjct: 179 AAILRLLAEEFPQAEAYLSFVAQSENAISDGTKIEE--LGNLAQESPQVLAVGFNCTAPH 236
Query: 496 HVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEGVN 552
+++L+ + Q + P + YPN G ++ + W D E E S+L W +GV
Sbjct: 237 LIASLLGELGQVCNKP---FLTYPNSGETYNGLTKTWHDDPEQERSLLENSKLWQNQGVR 293
Query: 553 IIGGCCEVTSYEIQQM 568
+ GGCC +I Q+
Sbjct: 294 LFGGCCRTRPEDIAQL 309
>gi|75316760|sp|Q4VNK0.1|SMTA_BRAOT RecName: Full=Selenocysteine Se-methyltransferase; Short=BoSMT
gi|60459900|gb|AAX20123.1| selenocysteine methyltransferase [Brassica oleracea var. italica]
Length = 346
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 133/262 (50%), Gaps = 17/262 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG +++ RH D PLWS+ L T P H D++ AGADII S+ YQA +
Sbjct: 26 IIDGGLATELERHGADLND--PLWSAKCLLTSPHLIHTVHLDYLEAGADIISSASYQATI 83
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
GYS +++ LL KSV++ A+ + +K I AAS+G YG
Sbjct: 84 QGFEAKGYSIEKSESLLRKSVEIACEARSTYYDKCKDDDDKKILKKR-PILVAASVGSYG 142
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEYSG Y D +T L +HR V+ L +G D +A ETIP + EA A +LL
Sbjct: 143 AFLADGSEYSGIYGDLITLETLKDFHRRRVQVLAESGADIIAFETIPNKLEAQAFAELLD 202
Query: 189 E----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
E PG W SF+ KD + G+ I + + +++ A+G+NC P + L
Sbjct: 203 EGVAKIPG---WFSFNSKDGVNVVSGDSIKECIA--IAEACEKVVAVGINCTPPRFIEGL 257
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
V I + S P +VYPN G
Sbjct: 258 VLEIAKVTSKP---ILVYPNSG 276
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 159/335 (47%), Gaps = 33/335 (9%)
Query: 250 QSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDF 309
++ +++ ++ G ++DG +++ RH D PLWS+ L T P H D+
Sbjct: 9 ETFYSMKELLKETGGYAIIDGGLATELERHGADLND--PLWSAKCLLTSPHLIHTVHLDY 66
Query: 310 IRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIK 369
+ + +S T+ G E G+ ++ +E+ L R +VE A Y K
Sbjct: 67 LEAGADIISSASYQATI--QGFEAKGYSIEK-SESLL----RKSVEIACEARSTYYDKCK 119
Query: 370 PSISSQ--------TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG 421
+ AAS+G YG L DGSEYSG Y D +T L +HR V+ L +G
Sbjct: 120 DDDDKKILKKRPILVAASVGSYGAFLADGSEYSGIYGDLITLETLKDFHRRRVQVLAESG 179
Query: 422 VDYLALETIPAEKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL 477
D +A ETIP + EA A +LL E PG W SF+ KD + G+ I + +
Sbjct: 180 ADIIAFETIPNKLEAQAFAELLDEGVAKIPG---WFSFNSKDGVNVVSGDSIKECIA--I 234
Query: 478 LANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTE- 534
+++ A+G+NC P + LV I + S P +VYPN G +D +W++
Sbjct: 235 AEACEKVVAVGINCTPPRFIEGLVLEIAKVTSKP---ILVYPNSGERYDPERKEWVENTG 291
Query: 535 -DEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+ YV +W++ GV+++GGCC T I+ +
Sbjct: 292 VGNEDFVSYVEKWMDAGVSLLGGCCRTTPTTIRAI 326
>gi|449305067|gb|EMD01074.1| hypothetical protein BAUCODRAFT_60756 [Baudoinia compniacensis UAMH
10762]
Length = 318
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 137/258 (53%), Gaps = 16/258 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG+ +++ D++ HPLWS L +P++ + H D+ AGADI ++ YQA+
Sbjct: 18 IIDGALATELEARG-HDLN-HPLWSGKLLRDDPDSIEQIHHDYYLAGADIAITASYQAST 75
Query: 69 DNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPY 127
L+ G E E+++L+ +SV+L A+ + +T I ++ + A S+GPY
Sbjct: 76 QGLSDHFGLKEDESIELIKRSVRLAQRARCQAYRTGSIAEDRKLLI-------AGSVGPY 128
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L +GSEY G Y S+ E + +HRP + AL+ AGVD LALET+P+ E ALV LL
Sbjct: 129 GAYLANGSEYRGDYQRSVEEFQI--FHRPRIRALIDAGVDLLALETMPSSPEIEALVSLL 186
Query: 188 R-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
EF AW+S + + H S G + + L +Q+ A G NC S L R
Sbjct: 187 NIEFADATAWVSCTLSNAKHLSDGSPTEAVLK--LAFESEQVVAFGFNCY-SSPDDALTR 243
Query: 247 CIKQSHPTVQTIVYPNKG 264
I + P V + Y N G
Sbjct: 244 SISRQGPPVVLLCYANSG 261
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 146/311 (46%), Gaps = 22/311 (7%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
+G ++DG+ +++ D++ HPLWS L +P++ + H D+ + A +
Sbjct: 13 RRGTLIIDGALATELEARG-HDLN-HPLWSGKLLRDDPDSIEQIHHDYYLAGADIAIT-A 69
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ----TA 377
Y + S++ G + E + I + +V RA A SI+ A
Sbjct: 70 SYQASTQGLSDHFG-----LKEDESIELIKRSVRLAQRARCQ--AYRTGSIAEDRKLLIA 122
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
S+GPYG L +GSEY G Y S+ E + +HRP + AL+ AGVD LALET+P+ E
Sbjct: 123 GSVGPYGAYLANGSEYRGDYQRSVEEFQI--FHRPRIRALIDAGVDLLALETMPSSPEIE 180
Query: 438 ALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
ALV LL EF AW+S + + H S G + + L +Q+ A G NC S
Sbjct: 181 ALVSLLNIEFADATAWVSCTLSNAKHLSDGSPTEAVLK--LAFESEQVVAFGFNCY-SSP 237
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWL--DTEDEYSILHYVPQWLEEGVNII 554
L R I + P V + Y N G WD+ W D + + V W GV ++
Sbjct: 238 DDALTRSISRQGPPVVLLCYANSGESWDAEQKTWRGGDASVKQGLSEEVCMWKAHGVRLM 297
Query: 555 GGCCEVTSYEI 565
GGCC T +I
Sbjct: 298 GGCCRTTPRDI 308
>gi|387783677|ref|YP_006069760.1| homocysteine S-methyltransferase 1 [Streptococcus salivarius
JIM8777]
gi|338744559|emb|CCB94925.1| homocysteine S-methyltransferase 1 [Streptococcus salivarius
JIM8777]
Length = 316
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 141/250 (56%), Gaps = 16/250 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
D+ G LWS+ YL +PE + H ++ AG+D+I +S YQA + L G +E+EA +
Sbjct: 30 DISGK-LWSAKYLLEKPEVIQKIHETYVAAGSDLITTSSYQATLPGLIDAGLTEKEAEQI 88
Query: 85 LHKSVQLMNSAKDKENQTPDIN--LNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV 142
+ +VQL +A+DK T D + + + L++G +GPY L +GSEY+G Y
Sbjct: 89 IALTVQLAKAARDKVWATLDDSEKAKRPYPLISG------DVGPYAAYLANGSEYTGDYG 142
Query: 143 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-REFPGQKAWLSFSC 201
TEA L +HRP ++ L+ GVD LALETIP EA AL++LL EF +A++SF+
Sbjct: 143 QITTEA-LKDFHRPRIQILLDQGVDLLALETIPNHLEAQALIELLAEEFSEAEAYISFTV 201
Query: 202 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 261
++ S + S + L+ DQI A+G+NC P + + +K + + I YP
Sbjct: 202 QEPGTIS--DRTSLDEIAQLVGQSDQILALGINCSSPLLYNQALTILKNAGKAL--ITYP 257
Query: 262 NKGVKLLDGS 271
N G ++ DGS
Sbjct: 258 NSG-EVYDGS 266
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 156/329 (47%), Gaps = 35/329 (10%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
NK +L G+ +++ D+ G LWS+ YL +PE + H ++
Sbjct: 10 NKSPLILHGALGTEMESLGY-DISGK-LWSAKYLLEKPEVIQKIHETYVAA--------- 58
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL----VRAGVDYL-ALIKPSISSQ- 375
G+ L S Y + + +A L + AL +A D + A + S ++
Sbjct: 59 --GSDLITTSSYQAT-LPGLIDAGLTEKEAEQIIALTVQLAKAARDKVWATLDDSEKAKR 115
Query: 376 ----TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
+ +GPY L +GSEY+G Y TEA L +HRP ++ L+ GVD LALETIP
Sbjct: 116 PYPLISGDVGPYAAYLANGSEYTGDYGQITTEA-LKDFHRPRIQILLDQGVDLLALETIP 174
Query: 432 AEKEALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490
EA AL++LL EF +A++SF+ ++ S + S + L+ DQI A+G+N
Sbjct: 175 NHLEAQALIELLAEEFSEAEAYISFTVQEPGTIS--DRTSLDEIAQLVGQSDQILALGIN 232
Query: 491 CVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE-DEYSILHYVPQW-LE 548
C P + + +K + + I YPN G V+D W + D +++ + W +
Sbjct: 233 CSSPLLYNQALTILKNAGKAL--ITYPNSGEVYDGSTQTWKPKDKDALTLVEHSKDWHAQ 290
Query: 549 EGVNIIGGCCEVTSYEIQQMRIMIDEFNT 577
GV I+GGCC +I + + EF T
Sbjct: 291 FGVKILGGCCRTRPNDI---KALYAEFRT 316
>gi|443623082|ref|ZP_21107592.1| putative homocysteine S-methyltransferase [Streptomyces
viridochromogenes Tue57]
gi|443343381|gb|ELS57513.1| putative homocysteine S-methyltransferase [Streptomyces
viridochromogenes Tue57]
Length = 320
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 130/258 (50%), Gaps = 23/258 (8%)
Query: 9 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG ++Q+ + H + D LWS+ L PEA E H + AGAD+ +S YQA
Sbjct: 30 VLDGGMSNQLESAGHDLSD----ELWSARLLAERPEAITEAHLAYFEAGADVAITSSYQA 85
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ G + A +LL SV+L A + +T + AAS+GP
Sbjct: 86 TFEGFAGRGIGRERAAELLALSVELARDAVARARG----------KGVTRPLWVAASVGP 135
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L DGSEY G Y S+ E L +HRP +E L A D LALET+P EA AL++
Sbjct: 136 YGAMLADGSEYRGRYGLSVDE--LERFHRPRLEVLAGARPDVLALETVPDADEAKALLRA 193
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R G AWLS+S D T G+ + A L A+ D++ A+GVNC P V V
Sbjct: 194 VRGL-GVPAWLSYSVAGD-RTRAGQPLEEAF--ALAADADEVIAVGVNCCAPQDVDAAVE 249
Query: 247 CIKQSHPTVQTIVYPNKG 264
++ +VYPN G
Sbjct: 250 TAARATGK-PVVVYPNSG 266
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 144/307 (46%), Gaps = 23/307 (7%)
Query: 264 GVKLLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
G +LDG ++Q+ + H + D LWS+ L PEA E H + + A +
Sbjct: 27 GTVVLDGGMSNQLESAGHDLSD----ELWSARLLAERPEAITEAHLAYFEAGADVAITSS 82
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
T ++G + A+L+A +VE L R V + AAS+G
Sbjct: 83 YQATF----EGFAGRGIGRERAAELLAL---SVE-LARDAVARARGKGVTRPLWVAASVG 134
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG +L DGSEY G Y S+ E L +HRP +E L A D LALET+P EA AL++
Sbjct: 135 PYGAMLADGSEYRGRYGLSVDE--LERFHRPRLEVLAGARPDVLALETVPDADEAKALLR 192
Query: 442 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
+R G AWLS+S D T G+ + A L A+ D++ A+GVNC P V V
Sbjct: 193 AVRGL-GVPAWLSYSVAGD-RTRAGQPLEEAF--ALAADADEVIAVGVNCCAPQDVDAAV 248
Query: 502 RCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVT 561
++ +VYPN G WD+ W D ++ V W G +IGGCC V
Sbjct: 249 ETAARATGK-PVVVYPNSGEAWDAEARAW-DGRSTFAA-EQVRGWRASGARLIGGCCRVG 305
Query: 562 SYEIQQM 568
I +
Sbjct: 306 PEAIGSI 312
>gi|445374291|ref|ZP_21426339.1| homocysteine methyltransferase [Streptococcus thermophilus MTCC
5460]
gi|445388796|ref|ZP_21428054.1| homocysteine methyltransferase [Streptococcus thermophilus MTCC
5461]
gi|444750544|gb|ELW75346.1| homocysteine methyltransferase [Streptococcus thermophilus MTCC
5461]
gi|444750641|gb|ELW75437.1| homocysteine methyltransferase [Streptococcus thermophilus MTCC
5460]
Length = 316
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 139/249 (55%), Gaps = 16/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
D+ G LWS+ YL +PE E H ++ AGAD+I S YQA + L + G +E+ A +
Sbjct: 30 DISGK-LWSAKYLLEKPEVIQELHETYVAAGADLITMSSYQATLPGLVEAGLTEKAAEQI 88
Query: 85 LHKSVQLMNSAKDKENQTPD--INLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV 142
+ +V+L +A+DK D + + L++G +GPY L +GSEYSG Y
Sbjct: 89 IALTVRLAKAARDKVWGALDETEKAKRPYPLISG------DVGPYAAYLANGSEYSGDY- 141
Query: 143 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-REFPGQKAWLSFSC 201
+T +L +HRP ++ L+ GVD LALETIP E AL++LL EFP +A++SF+
Sbjct: 142 GQITIKELKDFHRPRIQILLDQGVDLLALETIPNRLETQALIELLAEEFPEAEAYMSFTV 201
Query: 202 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 261
+ S G S A + L++ +QI A+G+NC P + + +K + T+ I YP
Sbjct: 202 QIPDAISDG--TSLAEIAKLVSQSNQILAVGINCSSPLLYNQTLAFLKNAGKTL--ITYP 257
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 258 NSG-EVYDG 265
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 35/329 (10%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
NK +L G+ +++ D+ G LWS+ YL +PE E H ++
Sbjct: 10 NKSPLILHGALGTEMEALGY-DISGK-LWSAKYLLEKPEVIQELHETYVAA--------- 58
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL----VRAGVDYL--ALIKPSISSQ 375
G L S Y + + EA L + AL +A D + AL + + +
Sbjct: 59 --GADLITMSSYQAT-LPGLVEAGLTEKAAEQIIALTVRLAKAARDKVWGALDETEKAKR 115
Query: 376 ----TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
+ +GPY L +GSEYSG Y +T +L +HRP ++ L+ GVD LALETIP
Sbjct: 116 PYPLISGDVGPYAAYLANGSEYSGDY-GQITIKELKDFHRPRIQILLDQGVDLLALETIP 174
Query: 432 AEKEALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490
E AL++LL EFP +A++SF+ + S G S A + L++ +QI A+G+N
Sbjct: 175 NRLETQALIELLAEEFPEAEAYMSFTVQIPDAISDG--TSLAEIAKLVSQSNQILAVGIN 232
Query: 491 CVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE-DEYSILHYVPQW-LE 548
C P + + +K + T+ I YPN G V+D W + D +++ + W
Sbjct: 233 CSSPLLYNQTLAFLKNAGKTL--ITYPNSGEVYDGDSQTWKPKDKDALTLVEHSKYWHAH 290
Query: 549 EGVNIIGGCCEVTSYEIQQMRIMIDEFNT 577
GV I+GGCC S +I + + EF T
Sbjct: 291 FGVKILGGCCRTRSNDI---KALYQEFRT 316
>gi|256592580|gb|ACV03420.1| selenocysteine methyltransferase [Astragalus racemosus]
Length = 338
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 139/269 (51%), Gaps = 20/269 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ ++ G +++ RH D PLWS+ L + P + H D++ GADII ++ YQ
Sbjct: 15 RTAIIAGGLGTELGRHGADLND--PLWSAKCLLSSPHLIRQVHLDYLENGADIIITASYQ 72
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKD----KENQTPDINLNKTFNLLTGHIETA 121
A + G+S++E LL +SV++ A+D + ++ N + + L I A
Sbjct: 73 ATIQGFKAKGFSDEEGEALLRRSVEIAREARDLYYQRCAESSSDNGDDSRILKQRPILIA 132
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
S+G YG L DGSE+SG+Y D++ L +HR V+ L +GVD LA E +P + EA
Sbjct: 133 GSVGSYGAYLADGSEFSGNYGDAIKLETLKDFHRRKVQILADSGVDLLAFEAVPNKLEAQ 192
Query: 182 ALVKLLREFPG-QKAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVNCVR 237
A LL E AW +F+ KD T+ G+ I S SC D++ A+G+NC
Sbjct: 193 AYADLLEEENMITPAWFAFNSKDGTNVVSGDSIEECGSIAESC-----DKVVAVGINCTP 247
Query: 238 PSHVSTLVRCIKQ--SHPTVQTIVYPNKG 264
P + L+ +K+ + P V +YPN G
Sbjct: 248 PRFIHDLILLLKKVTAKPIV---IYPNSG 273
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 146/319 (45%), Gaps = 30/319 (9%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIE---------TA 317
++ G +++ RH D PLWS+ L + P + H D++ + T
Sbjct: 18 IIAGGLGTELGRHGADLND--PLWSAKCLLSSPHLIRQVHLDYLENGADIIITASYQATI 75
Query: 318 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA 377
G +G V+ EA + + R E+ G D L + I A
Sbjct: 76 QGFKAKGFSDEEGEALLRRSVEIAREARDLYYQRC-AESSSDNGDDSRILKQRPI--LIA 132
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
S+G YG L DGSE+SG+Y D++ L +HR V+ L +GVD LA E +P + EA
Sbjct: 133 GSVGSYGAYLADGSEFSGNYGDAIKLETLKDFHRRKVQILADSGVDLLAFEAVPNKLEAQ 192
Query: 438 ALVKLLREFPG-QKAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVNCVR 493
A LL E AW +F+ KD T+ G+ I S SC D++ A+G+NC
Sbjct: 193 AYADLLEEENMITPAWFAFNSKDGTNVVSGDSIEECGSIAESC-----DKVVAVGINCTP 247
Query: 494 PSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTED--EYSILHYVPQWLEE 549
P + L+ +K+ + P V +YPN G +D + +W + + YV +W E
Sbjct: 248 PRFIHDLILLLKKVTAKPIV---IYPNSGETYDGIRKEWGQNSGVTDEDFVSYVDKWCES 304
Query: 550 GVNIIGGCCEVTSYEIQQM 568
G +++GGCC T I+ +
Sbjct: 305 GASLVGGCCRTTPDTIRGI 323
>gi|422884262|ref|ZP_16930711.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK49]
gi|332360695|gb|EGJ38504.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK49]
Length = 315
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 144/264 (54%), Gaps = 20/264 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ +LDG+ +++ R DV G LWS+ YL +P+ + H ++RA +DII +S YQ
Sbjct: 12 EIIILDGALGTELERLGY-DVSGK-LWSAQYLLDQPQIIQDVHESYVRADSDIITTSSYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAAS 123
A++ + G + ++ +LL ++V L A + +P+ + ++L+ G S
Sbjct: 70 ASIPAFIEAGLTPEKGYNLLKETVFLAQKAIENIWIGLSPEEQKQRPYSLVAG------S 123
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPY L DGSEY+G Y ++E + +HRP ++AL+ AG D LA+ETIP EA A+
Sbjct: 124 VGPYAAYLADGSEYTGDY--QLSEEEYRNFHRPRIQALLEAGSDLLAIETIPNGAEAAAI 181
Query: 184 VKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++LL EFP +A+LSF + + S G I L Q+ A+G NC P ++
Sbjct: 182 LQLLAEEFPQAEAYLSFVAQSENAISDGTKIEE--LGNLAQESPQVLAVGFNCTAPHLIA 239
Query: 243 TLVRCIKQ--SHPTVQTIVYPNKG 264
L+ + Q + P + YPN G
Sbjct: 240 PLLDGLGQVCNKP---FLTYPNSG 260
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 151/318 (47%), Gaps = 35/318 (11%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ +LDG+ +++ R DV G LWS+ YL +P+ + H ++R + +
Sbjct: 13 IIILDGALGTELERLGY-DVSGK-LWSAQYLLDQPQIIQDVHESYVRADSDIITT----- 65
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA----LVRAGVDYLAL-IKPSISSQ---- 375
S Y + + EA L N+ L + ++ + + + P Q
Sbjct: 66 ------SSYQAS-IPAFIEAGLTPEKGYNLLKETVFLAQKAIENIWIGLSPEEQKQRPYS 118
Query: 376 -TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 434
A S+GPY L DGSEY+G Y ++E + +HRP ++AL+ AG D LA+ETIP
Sbjct: 119 LVAGSVGPYAAYLADGSEYTGDY--QLSEEEYRNFHRPRIQALLEAGSDLLAIETIPNGA 176
Query: 435 EALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
EA A+++LL EFP +A+LSF + + S G I L Q+ A+G NC
Sbjct: 177 EAAAILQLLAEEFPQAEAYLSFVAQSENAISDGTKIEE--LGNLAQESPQVLAVGFNCTA 234
Query: 494 PSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEG 550
P ++ L+ + Q + P + YPN G ++ + W D E S+L W +G
Sbjct: 235 PHLIAPLLDGLGQVCNKP---FLTYPNSGETYNGLTKTWHDDPEQGRSLLENSKLWQNQG 291
Query: 551 VNIIGGCCEVTSYEIQQM 568
V + GGCC +I Q+
Sbjct: 292 VRLFGGCCRTRPEDIAQL 309
>gi|302839978|ref|XP_002951545.1| hypothetical protein VOLCADRAFT_92147 [Volvox carteri f.
nagariensis]
gi|300263154|gb|EFJ47356.1| hypothetical protein VOLCADRAFT_92147 [Volvox carteri f.
nagariensis]
Length = 327
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 138/271 (50%), Gaps = 34/271 (12%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG+ +++ R + + G LWS+ L +P+ H D++RAG+D+I + YQA
Sbjct: 12 VLILDGAQGTELERRGVH-LGGSKLWSAQLLIDDPDLIRTIHLDYLRAGSDVITTFTYQA 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSA--------KDKENQTPDINLNKTFNLLTGHI 118
++ G + LL+++V L SA + + Q P + + L+
Sbjct: 71 SIQGFADAGMDARMGATLLNRAVDLAESARTAFLDEQRQQHEQPPPHHQQRVRPLI---- 126
Query: 119 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV-RAGVDYLALETIPAE 177
A S G YG L DGSE+ G Y DSMT L +HR +E + R +D LA ET+P
Sbjct: 127 --AFSSGSYGAYLADGSEFRGDYADSMTLQQLANFHRDRLEPVRHRTEIDLLAFETVPCL 184
Query: 178 KEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPD---QIQAIGV 233
+EA A+++LLR E G+ AW+SFSC+D HTSHGE + L A ++ A GV
Sbjct: 185 REAEAILELLRQERYGKPAWISFSCRDAVHTSHGERFAEQCVPLLAAAAAEGLEVVATGV 244
Query: 234 NCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
NC P H+ L+ C YPN G
Sbjct: 245 NCTAPRHL--LLVC------------YPNSG 261
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 157/339 (46%), Gaps = 48/339 (14%)
Query: 255 VQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHI 314
+ +++ GV +LDG+ +++ R + + G LWS+ L +P+ H D++R
Sbjct: 2 LSSLLTNTGGVLILDGAQGTELERRGVH-LGGSKLWSAQLLIDDPDLIRTIHLDYLRAGS 60
Query: 315 ET------AASIGPY---GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL 365
+ ASI + G R G+ VD + E+ A+ + + +
Sbjct: 61 DVITTFTYQASIQGFADAGMDARMGATLLNRAVD-LAESARTAFLDEQRQQHEQPPPHHQ 119
Query: 366 ALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV-RAGVDY 424
++P I A S G YG L DGSE+ G Y DSMT L +HR +E + R +D
Sbjct: 120 QRVRPLI----AFSSGSYGAYLADGSEFRGDYADSMTLQQLANFHRDRLEPVRHRTEIDL 175
Query: 425 LALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPD- 482
LA ET+P +EA A+++LLR E G+ AW+SFSC+D HTSHGE + L A
Sbjct: 176 LAFETVPCLREAEAILELLRQERYGKPAWISFSCRDAVHTSHGERFAEQCVPLLAAAAAE 235
Query: 483 --QIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL 540
++ A GVNC P H+ L+ C YPN G WD H W D+ +
Sbjct: 236 GLEVVATGVNCTAPRHL--LLVC------------YPNSGEEWDGEHRCWRHLPDDIA-- 279
Query: 541 HYVPQWLEEG----------VNIIGGCCEVTSYEIQQMR 569
P+ E V+++GGCC I+ +R
Sbjct: 280 --EPECFAEAAAECVYGDPRVSLMGGCCRTGPEHIRALR 316
>gi|433648914|ref|YP_007293916.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Mycobacterium smegmatis
JS623]
gi|433298691|gb|AGB24511.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Mycobacterium smegmatis
JS623]
Length = 294
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/260 (36%), Positives = 130/260 (50%), Gaps = 28/260 (10%)
Query: 7 VKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
V + DG +++ H + D LWS+ L P A V H F RAGA I ++ Y
Sbjct: 10 VLIADGGLATELEARGHDLSD----DLWSARLLVDAPAAIVAVHCAFFRAGASIATTASY 65
Query: 65 QANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
QA+ D + G S EA L+ +SV L A+D+ + G AAS+
Sbjct: 66 QASFDGFAERGISRTEAERLMRRSVALARDARDE---------------VGGDGWVAASV 110
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L G EY G Y +T + L WHRP +E LV A D LALET+P EA ALV
Sbjct: 111 GPYGAALAHGEEYVGRY--GLTVSQLANWHRPRLEVLVAAEPDVLALETVPDVDEAEALV 168
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
L+ E G AWLS++ T T G+ ++ A + ++ +I A+GVNC P+ V
Sbjct: 169 TLVHEL-GVPAWLSYTIT-GTTTRAGQPLAEAF--AVASDMPEIVAVGVNCCAPADVEDA 224
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
VR ++ IVYPN G
Sbjct: 225 VRVAREVTGK-PVIVYPNSG 243
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 138/312 (44%), Gaps = 32/312 (10%)
Query: 261 PNKGVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
P+ V + DG +++ H + D LWS+ L P A V H F R A
Sbjct: 6 PHDTVLIADGGLATELEARGHDLSD----DLWSARLLVDAPAAIVAVHCAFFRAGASIAT 61
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--T 376
+ + Y + D E + R E L+R V + +
Sbjct: 62 T-----------ASYQASF-DGFAERGI---SRTEAERLMRRSVALARDARDEVGGDGWV 106
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
AAS+GPYG L G EY G Y +T + L WHRP +E LV A D LALET+P EA
Sbjct: 107 AASVGPYGAALAHGEEYVGRY--GLTVSQLANWHRPRLEVLVAAEPDVLALETVPDVDEA 164
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
ALV L+ E G AWLS++ T T G+ ++ A + ++ +I A+GVNC P+
Sbjct: 165 EALVTLVHEL-GVPAWLSYTIT-GTTTRAGQPLAEAF--AVASDMPEIVAVGVNCCAPAD 220
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556
V VR ++ IVYPN G WD W+ E +S G I+GG
Sbjct: 221 VEDAVRVAREVTGK-PVIVYPNSGESWDGERRTWIG-EGRWSADLAARW-AAAGARIVGG 277
Query: 557 CCEVTSYEIQQM 568
CC V +I +
Sbjct: 278 CCRVGPDDIAAL 289
>gi|357410607|ref|YP_004922343.1| homocysteine S-methyltransferase [Streptomyces flavogriseus ATCC
33331]
gi|320007976|gb|ADW02826.1| homocysteine S-methyltransferase [Streptomyces flavogriseus ATCC
33331]
Length = 311
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 146/311 (46%), Gaps = 34/311 (10%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIE---TAAS 319
+G LLDG ++Q+ D LWS+ L+ EP HR + R + TA+
Sbjct: 21 EGTVLLDGGLSNQLEAQGCDLSDA--LWSAGLLSDEPRQIEAAHRAYARAGAQVLITASY 78
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAAS 379
+ R G + A+L+A +VE RAG D S AAS
Sbjct: 79 QATFEGFARRG-------IGRARAAELMA---GSVELARRAGADT------GRESWVAAS 122
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
+GPYG +L DGSEY G Y MT +L+ +HRP VE L AG D LALET+P EA AL
Sbjct: 123 VGPYGAMLADGSEYRGRY--GMTVRELVRFHRPRVETLAAAGPDVLALETVPDADEAEAL 180
Query: 440 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
++ +++ WLS+S D T G+ ++ A L A DQ+ A+GVNC P+
Sbjct: 181 LRAVQDLD-VPVWLSYSVAGD-RTRAGQPLAEAFG--LAAGIDQVVAVGVNCCDPADADR 236
Query: 500 LVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWL--DTEDEYSILHYVPQWLEEGVNIIGGC 557
V + + +VYPN G WD+ W T + + H W G ++GGC
Sbjct: 237 AVE-VAAAATGKPVVVYPNSGEEWDADGRDWTGRSTFEPGRVRH----WRNAGARLVGGC 291
Query: 558 CEVTSYEIQQM 568
C V I+ +
Sbjct: 292 CRVGPSNIEAL 302
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 127/256 (49%), Gaps = 24/256 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG ++Q+ D LWS+ L+ EP HR + RAGA ++ ++ YQA
Sbjct: 25 LLDGGLSNQLEAQGCDLSDA--LWSAGLLSDEPRQIEAAHRAYARAGAQVLITASYQATF 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ + G A +L+ SV+L A + + AAS+GPYG
Sbjct: 83 EGFARRGIGRARAAELMAGSVELARRAGADTGRESWV---------------AASVGPYG 127
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
+L DGSEY G Y MT +L+ +HRP VE L AG D LALET+P EA AL++ ++
Sbjct: 128 AMLADGSEYRGRY--GMTVRELVRFHRPRVETLAAAGPDVLALETVPDADEAEALLRAVQ 185
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+ WLS+S D T G+ ++ A L A DQ+ A+GVNC P+ V +
Sbjct: 186 DLD-VPVWLSYSVAGD-RTRAGQPLAEAFG--LAAGIDQVVAVGVNCCDPADADRAVE-V 240
Query: 249 KQSHPTVQTIVYPNKG 264
+ +VYPN G
Sbjct: 241 AAAATGKPVVVYPNSG 256
>gi|422848746|ref|ZP_16895422.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK115]
gi|325689767|gb|EGD31771.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK115]
Length = 315
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 142/264 (53%), Gaps = 20/264 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ +LDG+ +++ DV G LWS+ YL +P+ + H ++RAG+DII +S YQ
Sbjct: 12 EIIILDGALGTELESLGY-DVSGK-LWSAQYLLDQPQIIQDMHESYVRAGSDIITTSSYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAAS 123
A++ + G + ++ DLL ++V L A + +P+ + L+ G S
Sbjct: 70 ASIPAFIEAGLTSEKGYDLLKETVFLAQKAIENVWTGLSPEEQKQRPCPLVAG------S 123
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPY L DGSEY+G+Y ++E + +HRP ++AL+ AG D LA+ETIP EA A+
Sbjct: 124 VGPYAAYLADGSEYTGNY--QLSEEEYRDFHRPRIQALLEAGSDLLAIETIPNGAEAAAI 181
Query: 184 VKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++LL EFP + +LSF + + S G I L Q+ A+G NC P ++
Sbjct: 182 LRLLTEEFPQAETYLSFVAQSENAISDGTKIEE--LGNLAQESPQVLAVGFNCTAPHLIA 239
Query: 243 TLVRCIKQ--SHPTVQTIVYPNKG 264
L+ + Q + P + YPN G
Sbjct: 240 PLLDALGQVCNKP---FLTYPNSG 260
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 150/318 (47%), Gaps = 35/318 (11%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ +LDG+ +++ DV G LWS+ YL +P+ + H ++R G
Sbjct: 13 IIILDGALGTELESLGY-DVSGK-LWSAQYLLDQPQIIQDMHESYVRA-----------G 59
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWH-----RPNVEALVRAGVDYLALIKPSISSQ---- 375
+ + S Y + + EA L + + V +A + + P Q
Sbjct: 60 SDIITTSSYQAS-IPAFIEAGLTSEKGYDLLKETVFLAQKAIENVWTGLSPEEQKQRPCP 118
Query: 376 -TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 434
A S+GPY L DGSEY+G+Y ++E + +HRP ++AL+ AG D LA+ETIP
Sbjct: 119 LVAGSVGPYAAYLADGSEYTGNY--QLSEEEYRDFHRPRIQALLEAGSDLLAIETIPNGA 176
Query: 435 EALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
EA A+++LL EFP + +LSF + + S G I L Q+ A+G NC
Sbjct: 177 EAAAILRLLTEEFPQAETYLSFVAQSENAISDGTKIEE--LGNLAQESPQVLAVGFNCTA 234
Query: 494 PSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEG 550
P ++ L+ + Q + P + YPN G ++ + W D E E S+L W +G
Sbjct: 235 PHLIAPLLDALGQVCNKP---FLTYPNSGETYNGLTKTWHDDPEQERSLLENSKLWQNQG 291
Query: 551 VNIIGGCCEVTSYEIQQM 568
V + GGCC +I Q+
Sbjct: 292 VRLFGGCCRTRPEDIAQL 309
>gi|416999946|ref|ZP_11940331.1| putative homocysteine S-methyltransferase [Veillonella parvula
ACS-068-V-Sch12]
gi|333976382|gb|EGL77250.1| putative homocysteine S-methyltransferase [Veillonella parvula
ACS-068-V-Sch12]
Length = 341
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 143/277 (51%), Gaps = 30/277 (10%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R+ D+ H LWS+ L +PE + H ++ AGADIIQSS YQA V
Sbjct: 22 VLDGALGTELERYGC-DIQ-HKLWSAKVLMDQPEIIKKIHISYLAAGADIIQSSGYQATV 79
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK-----------------ENQTPDINLNKTF 111
LGY +EA++L+ SV+L A+++ +TP+ +
Sbjct: 80 AGFKGLGYGTEEAIELVKLSVRLAVQARNEFLEAKASGALTLHGIKLGEETPEGVRYFSE 139
Query: 112 NLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 171
L + AAS+GPYG L DGSEY G Y D TE L +H P + D L+
Sbjct: 140 GALPKPL-VAASVGPYGAFLADGSEYRG-YPDVQTEY-LEIFHIPRLALFCEEHPDILSF 196
Query: 172 ETIPAEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 228
ETIP+ EA+A+ + + + G W++FSCKD H S GE I +P I
Sbjct: 197 ETIPSYAEAIAIARAMSDPFTSKGIPGWIAFSCKDGHHVSSGETIIKCAQMIDKVHP--I 254
Query: 229 QAIGVNCVRPSHVSTLVRCIKQSHPTVQTI-VYPNKG 264
IG+NC +P +V +L++ I+ T + I VYPN G
Sbjct: 255 TGIGINCSKPEYVESLIKDIRTV--TDKPIAVYPNLG 289
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 152/329 (46%), Gaps = 40/329 (12%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
+ KG +LDG+ +++ R+ D+ H LWS+ L +PE + H ++ +
Sbjct: 14 IIKEKGALVLDGALGTELERYGC-DIQ-HKLWSAKVLMDQPEIIKKIHISYLAAGADIIQ 71
Query: 319 SIGPYGTV-----LRDGSEYSGHYV-----------DSMTEADL---IAWHRPNVEALVR 359
S G TV L G+E + V + EA + H +
Sbjct: 72 SSGYQATVAGFKGLGYGTEEAIELVKLSVRLAVQARNEFLEAKASGALTLHGIKLGEETP 131
Query: 360 AGVDYL---ALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA 416
GV Y AL KP + AAS+GPYG L DGSEY G Y D TE L +H P +
Sbjct: 132 EGVRYFSEGALPKPLV----AASVGPYGAFLADGSEYRG-YPDVQTEY-LEIFHIPRLAL 185
Query: 417 LVRAGVDYLALETIPAEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSAV 473
D L+ ETIP+ EA+A+ + + + G W++FSCKD H S GE I
Sbjct: 186 FCEEHPDILSFETIPSYAEAIAIARAMSDPFTSKGIPGWIAFSCKDGHHVSSGETIIKCA 245
Query: 474 TSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTI-VYPNKGGVWDSVHMKWLD 532
+P I IG+NC +P +V +L++ I+ T + I VYPN G +DS W
Sbjct: 246 QMIDKVHP--ITGIGINCSKPEYVESLIKDIRTV--TDKPIAVYPNLGESYDSKTKTWYG 301
Query: 533 TEDEYSILHYVPQWLEEGVNIIGGCCEVT 561
D S + YV W + G IIGGCC T
Sbjct: 302 --DAASFVDYVEVWRKAGAEIIGGCCRTT 328
>gi|242058861|ref|XP_002458576.1| hypothetical protein SORBIDRAFT_03g036040 [Sorghum bicolor]
gi|241930551|gb|EES03696.1| hypothetical protein SORBIDRAFT_03g036040 [Sorghum bicolor]
Length = 353
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 138/265 (52%), Gaps = 19/265 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG +++ H D LWS+ L + P + H D++ AGAD+I S+ YQA +
Sbjct: 28 VVDGGLGTELEAHGADLHDA--LWSAKCLASAPHLIRKVHLDYLEAGADVIISASYQATI 85
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH---IETAASIG 125
+ G+S E+ +LL +SV + A+ D++ +++ + AASIG
Sbjct: 86 EGFQSRGFSRDESEELLRRSVHVAQEARRVFVAEGDVDSSRSRRERERERPPVLVAASIG 145
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
YG DGSEYSG Y S+T+ L +HR ++ L AG D +A ETIP + EA A +
Sbjct: 146 SYGAYRADGSEYSGDYGKSVTKEALKDFHRRRLQVLAGAGPDLIAFETIPNKLEAQAYAE 205
Query: 186 LLREFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVNCVRPSHV 241
LL E + AW SF+ KD H + G+ I ++ SC ++ A+GVNC P +
Sbjct: 206 LLEENGIRIPAWFSFTSKDGVHAASGDPITECAAVADSC-----QRVAAVGVNCTSPRLI 260
Query: 242 STLVRCIKQ--SHPTVQTIVYPNKG 264
L+ IK+ S P V VYPN G
Sbjct: 261 HGLILSIKKVTSKPIV---VYPNSG 282
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 157/349 (44%), Gaps = 27/349 (7%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
I + ++ V G ++DG +++ H D LWS+ L + P + H
Sbjct: 9 IVDAAGALRGFVREAGGCAVVDGGLGTELEAHGADLHDA--LWSAKCLASAPHLIRKVHL 66
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWH--RPNVEALVRAG-VDY 364
D++ + S T+ +G + G D E + H + V G VD
Sbjct: 67 DYLEAGADVIISASYQATI--EGFQSRGFSRDESEELLRRSVHVAQEARRVFVAEGDVDS 124
Query: 365 LALIKPSISSQ----TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 420
+ + AASIG YG DGSEYSG Y S+T+ L +HR ++ L A
Sbjct: 125 SRSRRERERERPPVLVAASIGSYGAYRADGSEYSGDYGKSVTKEALKDFHRRRLQVLAGA 184
Query: 421 GVDYLALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSC 476
G D +A ETIP + EA A +LL E + AW SF+ KD H + G+ I ++ SC
Sbjct: 185 GPDLIAFETIPNKLEAQAYAELLEENGIRIPAWFSFTSKDGVHAASGDPITECAAVADSC 244
Query: 477 LLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTE 534
++ A+GVNC P + L+ IK+ S P V VYPN G + + +W+D++
Sbjct: 245 -----QRVAAVGVNCTSPRLIHGLILSIKKVTSKPIV---VYPNSGETYIADTNEWVDSD 296
Query: 535 DEYS--ILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEFNTKKND 581
+ V +W G +IGGCC + ++ + + E + + D
Sbjct: 297 GATGTDFVSSVGEWRRAGAALIGGCCRTSPATVRAIARALREADADEYD 345
>gi|256592584|gb|ACV03422.1| selenocysteine methyltransferase [Astragalus ceramicus]
Length = 337
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 139/272 (51%), Gaps = 26/272 (9%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ ++ G +++ RH D PLWS+ L + P + H D++ GADII ++ YQ
Sbjct: 15 RTAVIAGGLATELERHGADLND--PLWSAKCLLSSPHLIRQVHLDYLENGADIIITASYQ 72
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKD----KENQTPDINLNKTFNLLTGHIETA 121
A + G+S++E LL +SV++ A+D + ++ N + + L I A
Sbjct: 73 ATIQGFKAKGFSDEEGEALLRRSVEIAREARDLYYQRCAESSSDNGDDSRILKQRPILIA 132
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
S+G YG L DGSEYSG+Y D++ L +HR V+ L +GVD LA E +P + EA
Sbjct: 133 GSVGSYGAYLADGSEYSGNYGDAIKLETLKDFHRRRVQILADSGVDLLAFEAVPNKPEAQ 192
Query: 182 ALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVN 234
A LL E P AW +F+ KD T+ G+ I S SC D++ A+G+N
Sbjct: 193 AYADLLEEENIITP---AWFAFNSKDGTNVVSGDSIEECGSIAESC-----DKVVAVGIN 244
Query: 235 CVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKG 264
C P + L+ K+ + P V +YPN G
Sbjct: 245 CTPPRFIHDLILLPKKVTAKPIV---IYPNSG 273
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 146/322 (45%), Gaps = 36/322 (11%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIE---------TA 317
++ G +++ RH D PLWS+ L + P + H D++ + T
Sbjct: 18 VIAGGLATELERHGADLND--PLWSAKCLLSSPHLIRQVHLDYLENGADIIITASYQATI 75
Query: 318 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA 377
G +G V+ EA + + R E+ G D L + I A
Sbjct: 76 QGFKAKGFSDEEGEALLRRSVEIAREARDLYYQR-CAESSSDNGDDSRILKQRPI--LIA 132
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
S+G YG L DGSEYSG+Y D++ L +HR V+ L +GVD LA E +P + EA
Sbjct: 133 GSVGSYGAYLADGSEYSGNYGDAIKLETLKDFHRRRVQILADSGVDLLAFEAVPNKPEAQ 192
Query: 438 ALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVN 490
A LL E P AW +F+ KD T+ G+ I S SC D++ A+G+N
Sbjct: 193 AYADLLEEENIITP---AWFAFNSKDGTNVVSGDSIEECGSIAESC-----DKVVAVGIN 244
Query: 491 CVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTED--EYSILHYVPQW 546
C P + L+ K+ + P V +YPN G +D + +W + + YV +W
Sbjct: 245 CTPPRFIHDLILLPKKVTAKPIV---IYPNSGETYDGIRKEWGQNSGVTDEDFVSYVDKW 301
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
E G +++GGCC T I+ +
Sbjct: 302 CESGASLVGGCCRTTPDTIRGI 323
>gi|357157405|ref|XP_003577787.1| PREDICTED: homocysteine S-methyltransferase 3-like [Brachypodium
distachyon]
Length = 340
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 144/285 (50%), Gaps = 27/285 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +++ H D PLWS+ + P + H D+I AGA+II ++ YQA +
Sbjct: 32 VLDGGLATELEAHGADLND--PLWSAKCILASPHLIRKVHLDYIEAGANIIITASYQATI 89
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKE-NQTPDINLNKTFNLLTGHIETAASIGPY 127
G+S+Q+ DLL KSV++ A++ + PD + +L AASIG Y
Sbjct: 90 QGFESKGFSKQQGEDLLTKSVKVAQEAREMFLKEHPDQSTPMQHPILV-----AASIGSY 144
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEYSG Y ++ T L +HR ++ L AG D +A ETIP + EA A V+LL
Sbjct: 145 GAYLADGSEYSGDYGEAGTLEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQAYVELL 204
Query: 188 REFP-GQKAWLSFSCKDDTHTSHGE-LISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
E +W SF+ KD + G+ LI A + A ++ A+G+NC P + L+
Sbjct: 205 DECNISIPSWFSFNSKDGVNVVSGDSLIECATIANACA---KVGAVGINCTPPRFIHGLI 261
Query: 246 RCIKQSHPTVQTIVYPNKGVK-------------LLDGSFTSQVS 277
I++ ++YPN G + + DG F S VS
Sbjct: 262 LSIRKVTDK-PILIYPNSGERYDAEKKEWVESTGVCDGDFVSYVS 305
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 153/319 (47%), Gaps = 20/319 (6%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G +LDG +++ H D PLWS+ + P + H D+I +
Sbjct: 29 GRLVLDGGLATELEAHGADLND--PLWSAKCILASPHLIRKVHLDYIEAGANIIITASYQ 86
Query: 324 GTVLRDGSEYSGHYV----DSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAAS 379
T+ G E G D +T++ +A + E ++ D ++ I AAS
Sbjct: 87 ATI--QGFESKGFSKQQGEDLLTKSVKVA--QEAREMFLKEHPDQSTPMQHPI--LVAAS 140
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
IG YG L DGSEYSG Y ++ T L +HR ++ L AG D +A ETIP + EA A
Sbjct: 141 IGSYGAYLADGSEYSGDYGEAGTLEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQAY 200
Query: 440 VKLLREFP-GQKAWLSFSCKDDTHTSHGE-LISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
V+LL E +W SF+ KD + G+ LI A + A ++ A+G+NC P +
Sbjct: 201 VELLDECNISIPSWFSFNSKDGVNVVSGDSLIECATIANACA---KVGAVGINCTPPRFI 257
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTED--EYSILHYVPQWLEEGVNIIG 555
L+ I++ ++YPN G +D+ +W+++ + + YV +W ++G +IG
Sbjct: 258 HGLILSIRKVTDK-PILIYPNSGERYDAEKKEWVESTGVCDGDFVSYVSEWCKDGAALIG 316
Query: 556 GCCEVTSYEIQQMRIMIDE 574
GCC T I+ + +++
Sbjct: 317 GCCRTTPNTIRAINRSLNQ 335
>gi|312865237|ref|ZP_07725465.1| homocysteine S-methyltransferase [Streptococcus downei F0415]
gi|311099348|gb|EFQ57564.1| homocysteine S-methyltransferase [Streptococcus downei F0415]
Length = 315
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 140/250 (56%), Gaps = 15/250 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL +P+A + H ++RAG+DI+ ++ YQA + L G +E +A +
Sbjct: 30 DVSGK-LWSAKYLLEDPKAIQDIHETYLRAGSDIVTTASYQATLPGLESYGLTEAQAKKI 88
Query: 85 LHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV 142
+ +V + SA+D+ + + ++ + L++G +GPY L DGSEY+G Y
Sbjct: 89 IASTVDIAKSARDQVWSSLSEIEKESRPYPLISG------DVGPYAAYLADGSEYTGDY- 141
Query: 143 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE-FPGQKAWLSFSC 201
++T+ +L +HRP + L GVD LALET+P EA ALV+LL E FP +A++SF+
Sbjct: 142 GAITKQELKDFHRPRLAILKEQGVDLLALETMPNFLEAQALVELLSEDFPQVEAYISFTS 201
Query: 202 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 261
+D S G +S L+ QI A+G+NC P + ++Q + + YP
Sbjct: 202 QDGQSISDGTALSEVAK--LVEASSQILAVGLNCSSPKVYPDFLHQLRQ-YTAKPLVTYP 258
Query: 262 NKGVKLLDGS 271
N G ++ DG+
Sbjct: 259 NSG-EVYDGA 267
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 140/295 (47%), Gaps = 27/295 (9%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS-------IGPYGTVLRDGSEY 333
DV G LWS+ YL +P+A + H ++R I T AS + YG +
Sbjct: 30 DVSGK-LWSAKYLLEDPKAIQDIHETYLRAGSDIVTTASYQATLPGLESYGLTEAQAKKI 88
Query: 334 SGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEY 393
VD A W ++ + + Y P IS +GPY L DGSEY
Sbjct: 89 IASTVDIAKSARDQVWS--SLSEIEKESRPY-----PLIS----GDVGPYAAYLADGSEY 137
Query: 394 SGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE-FPGQKAW 452
+G Y ++T+ +L +HRP + L GVD LALET+P EA ALV+LL E FP +A+
Sbjct: 138 TGDY-GAITKQELKDFHRPRLAILKEQGVDLLALETMPNFLEAQALVELLSEDFPQVEAY 196
Query: 453 LSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQ 512
+SF+ +D S G +S L+ QI A+G+NC P + ++Q +
Sbjct: 197 ISFTSQDGQSISDGTALSEVAK--LVEASSQILAVGLNCSSPKVYPDFLHQLRQ-YTAKP 253
Query: 513 TIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQ 566
+ YPN G V+D W D + +S+L W + G ++GGCC +IQ
Sbjct: 254 LVTYPNSGEVYDGATQTWTKDPDHSHSLLENTLTWQKLGAKVVGGCCRTRPSDIQ 308
>gi|452988121|gb|EME87876.1| hypothetical protein MYCFIDRAFT_128460 [Pseudocercospora fijiensis
CIRAD86]
Length = 328
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 143/260 (55%), Gaps = 16/260 (6%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V ++DG+ +++ D++ HPLWS+ L P + + H D+ +AGA+I ++ YQA
Sbjct: 16 VLIVDGALATELETRG-HDLN-HPLWSAKLLKENPASVQDVHLDYFKAGANIAITASYQA 73
Query: 67 NVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
++ LT G E EA L+ +SV+ +A+D + +PD + KT + A S+G
Sbjct: 74 GLEGLTTHFGIEEPEARLLIKRSVEAAKAARDAFSTSPDGS-GKT-------LLVAGSVG 125
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY+G Y ++ E +HR + L+ AGVD LA+ET+P E AL++
Sbjct: 126 PYGAFLADGSEYTGDYKKTVDE--FKRFHRSRIAVLIEAGVDLLAVETMPNLSEIKALLE 183
Query: 186 LLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
LL+ EFP AWL+ S KD H G S V + + + + G+NCV+P +
Sbjct: 184 LLQTEFPQAIAWLACSMKDAAHLCDGTSWQS-VLDLVNEHRSPLVSFGINCVQPHETADA 242
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
+ I++ + + I YPN G
Sbjct: 243 LDHIRR-YTDLPLICYPNSG 261
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 153/314 (48%), Gaps = 31/314 (9%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
++GV ++DG+ +++ D++ HPLWS+ L P + + H D+ + A+I
Sbjct: 13 SEGVLIVDGALATELETRG-HDLN-HPLWSAKLLKENPASVQDVHLDYFKA----GANIA 66
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT---AA 378
+ + H+ EA L+ + +VEA +A D + P S +T A
Sbjct: 67 ITASYQAGLEGLTTHFGIEEPEARLLI--KRSVEA-AKAARDAFS-TSPDGSGKTLLVAG 122
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG L DGSEY+G Y ++ E +HR + L+ AGVD LA+ET+P E A
Sbjct: 123 SVGPYGAFLADGSEYTGDYKKTVDE--FKRFHRSRIAVLIEAGVDLLAVETMPNLSEIKA 180
Query: 439 LVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
L++LL+ EFP AWL+ S KD H G S V + + + + G+NCV+P
Sbjct: 181 LLELLQTEFPQAIAWLACSMKDAAHLCDGTSWQS-VLDLVNEHRSPLVSFGINCVQPHET 239
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW--------LD-----TEDEYSILHYVP 544
+ + I++ + + I YPN G +W+S W LD +E +
Sbjct: 240 ADALDHIRR-YTDLPLICYPNSGEIWESATHTWHGSQQRTLLDDHSSKSEAASQLAAEFD 298
Query: 545 QWLEEGVNIIGGCC 558
W + G ++GGCC
Sbjct: 299 TWTKAGARLVGGCC 312
>gi|148274014|ref|YP_001223575.1| homocysteine methyltransferase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831944|emb|CAN02915.1| putative homocysteine S-methyltransferase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 301
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 142/319 (44%), Gaps = 50/319 (15%)
Query: 267 LLDGSFTS--QVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS----I 320
+LDG + + H + D PLWS+ L EP+A H +F R + A + +
Sbjct: 13 VLDGGLGTLLEARGHDLSD----PLWSARVLADEPDAVRAAHAEFFRAGADVAITASYQV 68
Query: 321 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ----- 375
G + + AD EAL+RA V A + ++ +
Sbjct: 69 G-----------FEAFAARGLGTAD--------TEALLRASVRLAAEARDEVAREDAAGA 109
Query: 376 -----TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI 430
AAS+GPYG L DGSEY+G +T +L WH P L AG D LA ETI
Sbjct: 110 GRDRWIAASVGPYGATLGDGSEYAGS--SGLTRDELRRWHAPRFAVLADAGADLLACETI 167
Query: 431 PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490
P+ E ALV L R G AWL+F+ + S GE ++ L D++ A+G+N
Sbjct: 168 PSLDEGRALVDLARG-SGASAWLAFTVEGGRLRS-GEPMAEGF--ALADEADEVVAVGIN 223
Query: 491 CVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEG 550
C P V + +S +VYPN G WD+V W L V W+ G
Sbjct: 224 CAHPEEVPAAI-AAARSVTDRPVVVYPNSGERWDAVARAWGGD----PALPAVDAWIRAG 278
Query: 551 VNIIGGCCEVTSYEIQQMR 569
+++GGCC+V EI +MR
Sbjct: 279 ASLVGGCCQVGPDEIARMR 297
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 123/260 (47%), Gaps = 20/260 (7%)
Query: 9 LLDGSFTS--QVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG + + H + D PLWS+ L EP+A H +F RAGAD+ ++ YQ
Sbjct: 13 VLDGGLGTLLEARGHDLSD----PLWSARVLADEPDAVRAAHAEFFRAGADVAITASYQV 68
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ G + LL SV+L A+D+ + + + AAS+GP
Sbjct: 69 GFEAFAARGLGTADTEALLRASVRLAAEARDEVAREDAAGAGRDRWI-------AASVGP 121
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY+G +T +L WH P L AG D LA ETIP+ E ALV L
Sbjct: 122 YGATLGDGSEYAGS--SGLTRDELRRWHAPRFAVLADAGADLLACETIPSLDEGRALVDL 179
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
R G AWL+F+ + S GE ++ L D++ A+G+NC P V +
Sbjct: 180 ARG-SGASAWLAFTVEGGRLRS-GEPMAEGF--ALADEADEVVAVGINCAHPEEVPAAI- 234
Query: 247 CIKQSHPTVQTIVYPNKGVK 266
+S +VYPN G +
Sbjct: 235 AAARSVTDRPVVVYPNSGER 254
>gi|260101552|ref|ZP_05751789.1| homocysteine S-methyltransferase [Lactobacillus helveticus DSM
20075]
gi|260084630|gb|EEW68750.1| homocysteine S-methyltransferase [Lactobacillus helveticus DSM
20075]
Length = 337
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 27/269 (10%)
Query: 1 MSKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQ 60
+S+ K +LDG+ + ++ R +K + LW++ L E + + H D+ AGA+++
Sbjct: 35 ISRAKKGIVLDGAMSDKLERQGVKT--NNKLWTATALINELDKVYQAHWDYFTAGAELVI 92
Query: 61 SSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG-HIE 119
+ YQANV T+ GYSEQEA + +V++ A+D Q TG H
Sbjct: 93 TDTYQANVQAFTQAGYSEQEAEKFIRDAVKVAKKARDDYEQK------------TGKHNY 140
Query: 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 179
A ++G YG L DG+EY G Y ++E + +A+H P + ++ D +ALET P E
Sbjct: 141 VAGTVGSYGAYLADGNEYRGDY--ELSELEYLAFHLPRLRQILAEKPDLIALETQPKLDE 198
Query: 180 ALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 235
LA++ L+E +P ++SF+ KD TH S G + AV++ + +Q+ AIG+NC
Sbjct: 199 PLAVLNWLKENASDYP---VYVSFTLKDATHISDGTTLEQAVSA--VDKFEQVFAIGINC 253
Query: 236 VRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+ P V+ + I + + +VYPN G
Sbjct: 254 ISPDLVAPASKEIGK-YTFKSLVVYPNLG 281
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 154/321 (47%), Gaps = 36/321 (11%)
Query: 258 IVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETA 317
I KG+ +LDG+ + ++ R +K + LW++ L E + + H D+ E
Sbjct: 35 ISRAKKGI-VLDGAMSDKLERQGVKT--NNKLWTATALINELDKVYQAHWDYFTAGAEL- 90
Query: 318 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT- 376
V+ D + + V + T+A + E +R V + +T
Sbjct: 91 --------VITDTYQAN---VQAFTQA---GYSEQEAEKFIRDAVKVAKKARDDYEQKTG 136
Query: 377 -----AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
A ++G YG L DG+EY G Y ++E + +A+H P + ++ D +ALET P
Sbjct: 137 KHNYVAGTVGSYGAYLADGNEYRGDY--ELSELEYLAFHLPRLRQILAEKPDLIALETQP 194
Query: 432 AEKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
E LA++ L+E +P ++SF+ KD TH S G + AV++ + +Q+ AI
Sbjct: 195 KLDEPLAVLNWLKENASDYP---VYVSFTLKDATHISDGTTLEQAVSA--VDKFEQVFAI 249
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWL 547
G+NC+ P V+ + I + + +VYPN G +D +W + ++++ +W
Sbjct: 250 GINCISPDLVAPASKEIGK-YTFKSLVVYPNLGASYDPKIKQWREFKEKFDFNRLTKKWY 308
Query: 548 EEGVNIIGGCCEVTSYEIQQM 568
+EG +IGGCC EI+Q+
Sbjct: 309 QEGARLIGGCCTTGPTEIKQI 329
>gi|300917137|ref|ZP_07133826.1| homocysteine S-methyltransferase, partial [Escherichia coli MS
115-1]
gi|300415614|gb|EFJ98924.1| homocysteine S-methyltransferase [Escherichia coli MS 115-1]
Length = 291
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 127/258 (49%), Gaps = 16/258 (6%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ D LWS+ L PE + H D+ RAGA ++ YQA
Sbjct: 16 ILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIRKVHLDYYRAGAQCAITASYQA 73
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
G E ++ L+ KSV+L A++ N G + A S+GP
Sbjct: 74 TPAGFAARGLDEAQSKALIGKSVELARKAREAYLAE---------NPQAGTLLVAGSVGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y S+ A+HRP VEAL+ AG D LA ET+P E AL +L
Sbjct: 125 YGAYLADGSEYRGDYHCSVEA--FQAFHRPRVEALLDAGADLLACETLPNFSEIEALAEL 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L +P +AW SF+ +D H S G + V LA Q+ A+G+NC+ + + ++
Sbjct: 183 LTAYPRARAWFSFTLRDSEHLSDGTPLRDVVA--FLAGYPQVVALGINCIALENTTAALQ 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
+ + +VYPN G
Sbjct: 241 HL-HGLTVLPLVVYPNSG 257
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 137/290 (47%), Gaps = 15/290 (5%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG+ +++ D LWS+ L PE + H D+ R + A +
Sbjct: 16 ILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIRKVHLDYYRAGAQCAITASYQA 73
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
T +G + EA A +VE +A YLA + + A S+GPYG
Sbjct: 74 TP-------AGFAARGLDEAQSKALIGKSVELARKAREAYLAENPQAGTLLVAGSVGPYG 126
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
L DGSEY G Y S+ A+HRP VEAL+ AG D LA ET+P E AL +LL
Sbjct: 127 AYLADGSEYRGDYHCSVEA--FQAFHRPRVEALLDAGADLLACETLPNFSEIEALAELLT 184
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 504
+P +AW SF+ +D H S G + V LA Q+ A+G+NC+ + + ++ +
Sbjct: 185 AYPRARAWFSFTLRDSEHLSDGTPLRDVVA--FLAGYPQVVALGINCIALENTTAALQHL 242
Query: 505 KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQWLEEGVNI 553
+ +VYPN G +D+V W + + L Y+PQW G +
Sbjct: 243 -HGLTVLPLVVYPNSGEHYDAVSKTWHHHGEHCAQLADYLPQWQGAGGRV 291
>gi|242084136|ref|XP_002442493.1| hypothetical protein SORBIDRAFT_08g020830 [Sorghum bicolor]
gi|241943186|gb|EES16331.1| hypothetical protein SORBIDRAFT_08g020830 [Sorghum bicolor]
Length = 331
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 145/281 (51%), Gaps = 17/281 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +++ + D PLWS+ L + P + H D++ AGA+I+ ++ YQA +
Sbjct: 25 VLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANILITASYQATI 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAASIG 125
G+S++++ +LL KSV++ A++ KE+ I + I AASIG
Sbjct: 83 QGFESKGFSKEQSENLLTKSVEIALEAREMFLKEHLEKSIPIQHP-------ILVAASIG 135
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
YG L DGSEYSG Y ++ T+ L +HR ++ L AG D +A ETIP + EA A V+
Sbjct: 136 SYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQAYVE 195
Query: 186 LLREFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
LL E AWLSF+ KD H G+ + T + ++ A+G+NC P + L
Sbjct: 196 LLEECNINIPAWLSFNSKDGVHIVSGDSVIECTT--IADKCAKVGAVGINCTPPRFIHGL 253
Query: 245 VRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD 285
+ I++ ++YPN G + DG V + D D
Sbjct: 254 ILSIRKVTDK-PILIYPNSGER-YDGEKKEWVESTGVSDGD 292
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 157/322 (48%), Gaps = 21/322 (6%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G +LDG +++ + D PLWS+ L + P + H D++ +
Sbjct: 22 GRLVLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANILITASYQ 79
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL-IKPSISSQ----TAA 378
T+ G E G + +E L +VE + A +L ++ SI Q AA
Sbjct: 80 ATI--QGFESKG-FSKEQSENLLT----KSVEIALEAREMFLKEHLEKSIPIQHPILVAA 132
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
SIG YG L DGSEYSG Y ++ T+ L +HR ++ L AG D +A ETIP + EA A
Sbjct: 133 SIGSYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQA 192
Query: 439 LVKLLREFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
V+LL E AWLSF+ KD H G+ + T + ++ A+G+NC P +
Sbjct: 193 YVELLEECNINIPAWLSFNSKDGVHIVSGDSVIECTT--IADKCAKVGAVGINCTPPRFI 250
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE--DEYSILHYVPQWLEEGVNIIG 555
L+ I++ ++YPN G +D +W+++ + + YV +W ++G +IG
Sbjct: 251 HGLILSIRKVTDK-PILIYPNSGERYDGEKKEWVESTGVSDGDFVSYVNEWCKDGAALIG 309
Query: 556 GCCEVTSYEIQQMRIMIDE-FN 576
GCC T I+ ++ +++ FN
Sbjct: 310 GCCRTTPNTIRAIQRTLNQGFN 331
>gi|383825373|ref|ZP_09980523.1| homocysteine methyltransferase [Mycobacterium xenopi RIVM700367]
gi|383335103|gb|EID13535.1| homocysteine methyltransferase [Mycobacterium xenopi RIVM700367]
Length = 297
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 143/306 (46%), Gaps = 34/306 (11%)
Query: 265 VKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
V + DG +++ H + D PLWS+ L PE H + R
Sbjct: 10 VLIGDGGLATELEARGHDLSD----PLWSARLLIDAPEEITAVHAAYFRA---------- 55
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ---TAAS 379
G ++ + Y + D + R + L+R V+ A+ + + + AAS
Sbjct: 56 -GAMIATTASYQASF-DGFAARGI---GRDDTVRLLRRSVELAAIARDRVGANCRWVAAS 110
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
+GPYG L DGSEY G Y ++ A L AWHRP +E L AG D LALET+P EA AL
Sbjct: 111 VGPYGAALADGSEYRGRY--GLSVAALEAWHRPRLEVLAEAGADVLALETVPDIDEAEAL 168
Query: 440 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
V ++R AWLS++ D T T + ++ A +I A+GVNC P V
Sbjct: 169 VNVVRRL-AVPAWLSYTI-DGTRTRAEQPLAEAFAVAAEVP--EIVAVGVNCCAPDDVLH 224
Query: 500 LVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
V +Q+ V IVYPN G WDS W+ + +S P+W+ G I+GGCC
Sbjct: 225 AVAAARQTGKPV--IVYPNSGERWDSARRAWVG-QSRFSP-ELAPKWVSAGARIVGGCCR 280
Query: 560 VTSYEI 565
V +I
Sbjct: 281 VHPADI 286
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 130/262 (49%), Gaps = 28/262 (10%)
Query: 7 VKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
V + DG +++ H + D PLWS+ L PE H + RAGA I ++ Y
Sbjct: 10 VLIGDGGLATELEARGHDLSD----PLWSARLLIDAPEEITAVHAAYFRAGAMIATTASY 65
Query: 65 QANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
QA+ D G + + LL +SV+L A+D+ + N + AAS+
Sbjct: 66 QASFDGFAARGIGRDDTVRLLRRSVELAAIARDR------VGANCRW--------VAASV 111
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSEY G Y ++ A L AWHRP +E L AG D LALET+P EA ALV
Sbjct: 112 GPYGAALADGSEYRGRY--GLSVAALEAWHRPRLEVLAEAGADVLALETVPDIDEAEALV 169
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
++R AWLS++ D T T + ++ A +I A+GVNC P V
Sbjct: 170 NVVRRL-AVPAWLSYTI-DGTRTRAEQPLAEAFAVAAEVP--EIVAVGVNCCAPDDVLHA 225
Query: 245 VRCIKQSHPTVQTIVYPNKGVK 266
V +Q+ V IVYPN G +
Sbjct: 226 VAAARQTGKPV--IVYPNSGER 245
>gi|227545232|ref|ZP_03975281.1| Homocysteine S-methyltransferase [Lactobacillus reuteri CF48-3A]
gi|338202429|ref|YP_004648574.1| homocysteine S-methyltransferase [Lactobacillus reuteri SD2112]
gi|227184797|gb|EEI64868.1| Homocysteine S-methyltransferase [Lactobacillus reuteri CF48-3A]
gi|336447669|gb|AEI56284.1| homocysteine S-methyltransferase [Lactobacillus reuteri SD2112]
Length = 310
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 153/313 (48%), Gaps = 19/313 (6%)
Query: 2 SKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQS 61
+++ K L+DG+ ++ + + + + LW++ L +P + H+++ +AGA + +
Sbjct: 6 AELTKPLLIDGAMSTALEQ--LGADTNNSLWTASVLANQPALVKKVHQEYFKAGARLAIT 63
Query: 62 SCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETA 121
YQANV K GYS+QEA L+ ++V L A+D+ Q I +N + G
Sbjct: 64 DTYQANVPAFIKNGYSKQEAHSLIQRAVALAKEARDEYQQETGI-----YNYVAG----- 113
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
++GPYG L +GSEYSG Y S TE +HRP + ++ GVD +A+ET P E L
Sbjct: 114 -ALGPYGAYLANGSEYSGDYHLSTTEYQ--QFHRPRLTDILTVGVDVIAIETQPRLDEVL 170
Query: 182 ALVKLLREF-PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 240
A + L++E P ++SFS KD TH G + AV + +A + A+GVNC+
Sbjct: 171 AELDLVKELAPETLCYVSFSLKDSTHLPDGTPL--AVAARTVAKYPNVFAVGVNCIPLEE 228
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE 300
V+ + I Q+ I YPN + T VD P W + LT
Sbjct: 229 VTAAIETIHQATDK-PVIAYPNSSATYDPTTKTWSYPHGRRGLVDYLPQWLAAGLTIIGG 287
Query: 301 ACVETHRDFIRGH 313
C T +D H
Sbjct: 288 CCTTTPQDIAALH 300
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 145/306 (47%), Gaps = 23/306 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
L+DG+ ++ + + + + LW++ L +P + H+++ + A + V
Sbjct: 13 LIDGAMSTALEQ--LGADTNNSLWTASVLANQPALVKKVHQEYFKAGARLAITDTYQANV 70
Query: 327 ---LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPY 383
+++G YS S+ + + AL + D + I + A ++GPY
Sbjct: 71 PAFIKNG--YSKQEAHSLIQRAV---------ALAKEARDEYQQ-ETGIYNYVAGALGPY 118
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L +GSEYSG Y S TE +HRP + ++ GVD +A+ET P E LA + L+
Sbjct: 119 GAYLANGSEYSGDYHLSTTEYQ--QFHRPRLTDILTVGVDVIAIETQPRLDEVLAELDLV 176
Query: 444 REF-PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
+E P ++SFS KD TH G + AV + +A + A+GVNC+ V+ +
Sbjct: 177 KELAPETLCYVSFSLKDSTHLPDGTPL--AVAARTVAKYPNVFAVGVNCIPLEEVTAAIE 234
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTS 562
I Q+ I YPN +D W ++ Y+PQWL G+ IIGGCC T
Sbjct: 235 TIHQATDK-PVIAYPNSSATYDPTTKTWSYPHGRRGLVDYLPQWLAAGLTIIGGCCTTTP 293
Query: 563 YEIQQM 568
+I +
Sbjct: 294 QDIAAL 299
>gi|256592588|gb|ACV03424.1| selenocysteine methyltransferase [Astragalus leptocarpus]
Length = 337
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 138/272 (50%), Gaps = 26/272 (9%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ ++ G +++ RH D PLWS+ L + P + H D++ GADII ++ YQ
Sbjct: 15 RTAVIAGGLATELERHGADLND--PLWSAKCLLSSPHLIRQVHLDYLENGADIIITASYQ 72
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKD----KENQTPDINLNKTFNLLTGHIETA 121
A + G+S +E LL +SV + A+D + ++ N + + L I A
Sbjct: 73 ATIQGFKAKGFSGEEGEALLRRSVGIAREARDLYYQRCAESSSDNGDDSRILKQRPILIA 132
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
S+G YG L DGSEYSG+Y D++ L +HR V+ L +GVD LA E +P + EA
Sbjct: 133 GSVGSYGAYLADGSEYSGNYGDAIKLETLKDFHRRRVQILADSGVDLLAFEAVPNKLEAQ 192
Query: 182 ALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVN 234
A LL E P AW +F+ KD T+ G+ I S SC D++ A+G+N
Sbjct: 193 AYADLLEEENIITP---AWFAFNSKDGTNVVSGDSIEECGSIAESC-----DKVVAVGIN 244
Query: 235 CVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKG 264
C P + L+ +K+ + P V +YPN G
Sbjct: 245 CTPPRFIHDLILLLKKVTAKPIV---IYPNSG 273
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 146/322 (45%), Gaps = 36/322 (11%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIE---------TA 317
++ G +++ RH D PLWS+ L + P + H D++ + T
Sbjct: 18 VIAGGLATELERHGADLND--PLWSAKCLLSSPHLIRQVHLDYLENGADIIITASYQATI 75
Query: 318 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA 377
G +G V EA + + R E+ G D L + I A
Sbjct: 76 QGFKAKGFSGEEGEALLRRSVGIAREARDLYYQRC-AESSSDNGDDSRILKQRPI--LIA 132
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
S+G YG L DGSEYSG+Y D++ L +HR V+ L +GVD LA E +P + EA
Sbjct: 133 GSVGSYGAYLADGSEYSGNYGDAIKLETLKDFHRRRVQILADSGVDLLAFEAVPNKLEAQ 192
Query: 438 ALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVN 490
A LL E P AW +F+ KD T+ G+ I S SC D++ A+G+N
Sbjct: 193 AYADLLEEENIITP---AWFAFNSKDGTNVVSGDSIEECGSIAESC-----DKVVAVGIN 244
Query: 491 CVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTED--EYSILHYVPQW 546
C P + L+ +K+ + P V +YPN G +D + +W + + YV +W
Sbjct: 245 CTPPRFIHDLILLLKKVTAKPIV---IYPNSGETYDGIRKEWGQNSGVTDEDFVSYVDKW 301
Query: 547 LEEGVNIIGGCCEVTSYEIQQM 568
E G +++GGCC T I+ +
Sbjct: 302 CESGASLVGGCCRTTPDTIRGI 323
>gi|282849176|ref|ZP_06258561.1| homocysteine S-methyltransferase [Veillonella parvula ATCC 17745]
gi|282580880|gb|EFB86278.1| homocysteine S-methyltransferase [Veillonella parvula ATCC 17745]
Length = 341
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 143/277 (51%), Gaps = 30/277 (10%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R+ D+ H LWS+ L +P+ + H ++ AGADIIQSS YQA V
Sbjct: 22 VLDGALGTELERYGC-DIQ-HKLWSAKVLMDQPDIIKKIHISYLAAGADIIQSSGYQATV 79
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK-----------------ENQTPDINLNKTF 111
LGY +EA++L+ SV+L A+++ +TP+ +
Sbjct: 80 AGFKGLGYGTEEAIELVKLSVRLAVQARNEFLEAKASGALTLDGIKLGEETPEGVRYFSE 139
Query: 112 NLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 171
L + AAS+GPYG L DGSEY G Y D TE L +H P + D L+
Sbjct: 140 GALPKPL-VAASVGPYGAFLADGSEYRG-YPDVQTEY-LEIFHIPRLALFCEEHPDILSF 196
Query: 172 ETIPAEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 228
ETIP+ EA+A+ + + + G W++FSCKD H S GE I +P I
Sbjct: 197 ETIPSYAEAIAIARAMSDPFTSKGIPGWIAFSCKDGHHVSSGETIIKCAQMIDKVHP--I 254
Query: 229 QAIGVNCVRPSHVSTLVRCIKQSHPTVQTI-VYPNKG 264
IG+NC +P +V +L++ I+ T + I VYPN G
Sbjct: 255 TGIGINCSKPEYVESLIKDIRTV--TDKPIAVYPNLG 289
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 152/330 (46%), Gaps = 42/330 (12%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
+ KG +LDG+ +++ R+ D+ H LWS+ L +P+ + H ++ +
Sbjct: 14 IIKEKGALVLDGALGTELERYGC-DIQ-HKLWSAKVLMDQPDIIKKIHISYLAAGADIIQ 71
Query: 319 SIGPYGTV-----LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA------------- 360
S G TV L G+E + V + A + +EA
Sbjct: 72 SSGYQATVAGFKGLGYGTEEAIELVKLSVRLAVQARNE-FLEAKASGALTLDGIKLGEET 130
Query: 361 --GVDYL---ALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVE 415
GV Y AL KP + AAS+GPYG L DGSEY G Y D TE L +H P +
Sbjct: 131 PEGVRYFSEGALPKPLV----AASVGPYGAFLADGSEYRG-YPDVQTEY-LEIFHIPRLA 184
Query: 416 ALVRAGVDYLALETIPAEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSA 472
D L+ ETIP+ EA+A+ + + + G W++FSCKD H S GE I
Sbjct: 185 LFCEEHPDILSFETIPSYAEAIAIARAMSDPFTSKGIPGWIAFSCKDGHHVSSGETIIKC 244
Query: 473 VTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTI-VYPNKGGVWDSVHMKWL 531
+P I IG+NC +P +V +L++ I+ T + I VYPN G +DS W
Sbjct: 245 AQMIDKVHP--ITGIGINCSKPEYVESLIKDIRTV--TDKPIAVYPNLGESYDSKTKTWY 300
Query: 532 DTEDEYSILHYVPQWLEEGVNIIGGCCEVT 561
D S + YV W + G IIGGCC T
Sbjct: 301 G--DAASFVDYVEVWRKAGAEIIGGCCRTT 328
>gi|162464417|ref|NP_001105014.1| homocysteine S-methyltransferase 4 [Zea mays]
gi|50400642|sp|Q9FUM7.1|HMT4_MAIZE RecName: Full=Homocysteine S-methyltransferase 4; AltName:
Full=S-methylmethionine:homocysteine methyltransferase
4; Short=SMM:Hcy S-methyltransferase 4; AltName:
Full=ZmHMT-4
gi|10732791|gb|AAG22540.1|AF297047_1 homocysteine S-methyltransferase-4 [Zea mays]
Length = 342
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 134/262 (51%), Gaps = 20/262 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG +++ H D LWS+ L + P + H D++ AGAD+I S+ YQA +
Sbjct: 26 VVDGGLGTELEAHGADLHDA--LWSAKCLASAPHLIRKVHLDYLEAGADVIISASYQATI 83
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G+S E+ +LL +SV + A+ D + + AAS+G YG
Sbjct: 84 EGFQSRGFSRDESEELLRRSVHVAQEARRVFAAEGDRSSRRGRPPAL----VAASVGSYG 139
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
DGSEYSG Y SMT+ DL +HR ++ L AG D +A ETIP + EA +LL
Sbjct: 140 AYRADGSEYSGDYGKSMTKEDLKNFHRRRLQVLAGAGPDLIAFETIPNKLEAQVYAELLE 199
Query: 189 EFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
E + AW SF+ KD + + G+ I ++ SC ++ A+GVNC P + L
Sbjct: 200 ENGIRIPAWFSFTSKDGVNAASGDPINECAAVADSC-----PRVDAVGVNCTAPRFIHGL 254
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ IK+ S P V VYPN G
Sbjct: 255 ILSIKKVTSKPIV---VYPNSG 273
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 150/330 (45%), Gaps = 21/330 (6%)
Query: 254 TVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH 313
++ V G ++DG +++ H D LWS+ L + P + H D++
Sbjct: 13 ALRGFVREAGGCAVVDGGLGTELEAHGADLHDA--LWSAKCLASAPHLIRKVHLDYLEAG 70
Query: 314 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSIS 373
+ S T+ +G + G D E + H V A + +
Sbjct: 71 ADVIISASYQATI--EGFQSRGFSRDESEELLRRSVHVAQEARRVFAAEGDRSSRRGRPP 128
Query: 374 SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
+ AAS+G YG DGSEYSG Y SMT+ DL +HR ++ L AG D +A ETIP +
Sbjct: 129 ALVAASVGSYGAYRADGSEYSGDYGKSMTKEDLKNFHRRRLQVLAGAGPDLIAFETIPNK 188
Query: 434 KEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGV 489
EA +LL E + AW SF+ KD + + G+ I ++ SC ++ A+GV
Sbjct: 189 LEAQVYAELLEENGIRIPAWFSFTSKDGVNAASGDPINECAAVADSC-----PRVDAVGV 243
Query: 490 NCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYS---ILHYVP 544
NC P + L+ IK+ S P V VYPN G + + +W+D++ + V
Sbjct: 244 NCTAPRFIHGLILSIKKVTSKPIV---VYPNSGETYVAETNEWVDSDGATGTDDFVSRVG 300
Query: 545 QWLEEGVNIIGGCCEVTSYEIQQMRIMIDE 574
+W G +IGGCC + ++ + + E
Sbjct: 301 EWRRAGAALIGGCCRTSPATVRAIARAVRE 330
>gi|429109162|ref|ZP_19170932.1| Homocysteine S-methyltransferase [Cronobacter malonaticus 507]
gi|426310319|emb|CCJ97045.1| Homocysteine S-methyltransferase [Cronobacter malonaticus 507]
Length = 311
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 143/296 (48%), Gaps = 15/296 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ D LWS+ L +PE H D+ R + A + T
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+G + EA A +VE +A DY + A S+GPYG
Sbjct: 76 -------AGFAARGLDEAQSRALIARSVELARQARDDYYHEQPDAGPLLVAGSVGPYGAY 128
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y +++ A+ +HRP VEAL+ AG D LA ET+P+ EALAL LL +
Sbjct: 129 LADGSEYRGDY--TLSAAEFADFHRPRVEALLEAGADLLACETLPSLPEALALAALLESY 186
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
P +AW +F+ +D H S G + + LA QI A+G+NCV + + +
Sbjct: 187 PQARAWFTFTLRDSDHISDGTPLGDVAAA--LAPYPQIVALGINCVALEKTTAALGRLHD 244
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEGVNIIGGCCEVT 561
+ + +VYPN G +D+V W D ++ HY+ +W G +IGGCC T
Sbjct: 245 AT-RLPLVVYPNSGEQYDAVSKTWRHDGHACQTLAHYLNEWRAAGAALIGGCCRTT 299
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 140/280 (50%), Gaps = 26/280 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ D LWS+ L +PE H D+ RAGA ++ YQA
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKE-NQTPDINLNKTFNLLTGHIETAASIGPY 127
G E ++ L+ +SV+L A+D ++ PD G + A S+GPY
Sbjct: 76 AGFAARGLDEAQSRALIARSVELARQARDDYYHEQPD----------AGPLLVAGSVGPY 125
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEY G Y +++ A+ +HRP VEAL+ AG D LA ET+P+ EALAL LL
Sbjct: 126 GAYLADGSEYRGDY--TLSAAEFADFHRPRVEALLEAGADLLACETLPSLPEALALAALL 183
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
+P +AW +F+ +D H S G + + LA QI A+G+NCV + +
Sbjct: 184 ESYPQARAWFTFTLRDSDHISDGTPLGDVAAA--LAPYPQIVALGINCVALEKTTAALGR 241
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGH 287
+ + + +VYPN G + S+ RH DGH
Sbjct: 242 LHDAT-RLPLVVYPNSGEQY---DAVSKTWRH-----DGH 272
>gi|414880278|tpg|DAA57409.1| TPA: homocysteine S-methyltransferase 4 [Zea mays]
Length = 342
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 134/262 (51%), Gaps = 20/262 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG +++ H D LWS+ L + P + H D++ AGAD+I S+ YQA +
Sbjct: 26 VVDGGLGTELEAHGADLHDA--LWSAKCLASAPHLIRKVHLDYLEAGADVIISASYQATI 83
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G+S E+ +LL +SV + A+ D + + AAS+G YG
Sbjct: 84 EGFQSRGFSRDESEELLRRSVHVAQEARRVFAAEGDRSSRRGRPPAL----VAASVGSYG 139
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
DGSEYSG Y SMT+ DL +HR ++ L AG D +A ETIP + EA +LL
Sbjct: 140 AYRADGSEYSGDYGKSMTKEDLKNFHRRRLQVLAGAGPDLIAFETIPNKLEAQVYAELLE 199
Query: 189 EFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
E + AW SF+ KD + + G+ I ++ SC ++ A+GVNC P + L
Sbjct: 200 ENGIRIPAWFSFTSKDGVNAASGDPINECAAVADSC-----PRVAAVGVNCTAPRFIHGL 254
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ IK+ S P V VYPN G
Sbjct: 255 ILSIKKVTSKPIV---VYPNSG 273
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 150/330 (45%), Gaps = 21/330 (6%)
Query: 254 TVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH 313
++ V G ++DG +++ H D LWS+ L + P + H D++
Sbjct: 13 ALRGFVREAGGCAVVDGGLGTELEAHGADLHDA--LWSAKCLASAPHLIRKVHLDYLEAG 70
Query: 314 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSIS 373
+ S T+ +G + G D E + H V A + +
Sbjct: 71 ADVIISASYQATI--EGFQSRGFSRDESEELLRRSVHVAQEARRVFAAEGDRSSRRGRPP 128
Query: 374 SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
+ AAS+G YG DGSEYSG Y SMT+ DL +HR ++ L AG D +A ETIP +
Sbjct: 129 ALVAASVGSYGAYRADGSEYSGDYGKSMTKEDLKNFHRRRLQVLAGAGPDLIAFETIPNK 188
Query: 434 KEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGV 489
EA +LL E + AW SF+ KD + + G+ I ++ SC ++ A+GV
Sbjct: 189 LEAQVYAELLEENGIRIPAWFSFTSKDGVNAASGDPINECAAVADSC-----PRVAAVGV 243
Query: 490 NCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYS---ILHYVP 544
NC P + L+ IK+ S P V VYPN G + + +W+D++ + V
Sbjct: 244 NCTAPRFIHGLILSIKKVTSKPIV---VYPNSGESYVAETNEWVDSDGATGTDDFVSRVG 300
Query: 545 QWLEEGVNIIGGCCEVTSYEIQQMRIMIDE 574
+W G +IGGCC + ++ + + E
Sbjct: 301 EWRRAGAALIGGCCRTSPATVRAIARAVRE 330
>gi|418472576|ref|ZP_13042304.1| homocysteine methyltransferase [Streptomyces coelicoflavus ZG0656]
gi|371546798|gb|EHN75230.1| homocysteine methyltransferase [Streptomyces coelicoflavus ZG0656]
Length = 309
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 131/260 (50%), Gaps = 24/260 (9%)
Query: 9 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG ++Q+ + H + D LWS+ L +PEA H + AGAD++ +S YQA
Sbjct: 15 VLDGGLSNQLEAAGHDLGDA----LWSARLLADDPEAITRAHLAYFEAGADVVITSSYQA 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G Q A +LL SV+ A + P + + AAS GP
Sbjct: 71 TFEGFARRGIGGQRAAELLALSVESAREAARRARVGPAGGAGR-------RLWVAASAGP 123
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L DGSEY G Y + +L +HRP +E L A D LALET+P EA+AL++
Sbjct: 124 YGAMLADGSEYRGRY--GLDVGELERFHRPRLEVLAAARPDVLALETVPDTVEAVALLRA 181
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R G AWLS++ D T G+ + A L A+ +++ A+GVNC P VS VR
Sbjct: 182 VRGL-GVPAWLSYTVDGD-RTRAGQPLEEAF--ALAADAEEVVAVGVNCCAPGDVSGAVR 237
Query: 247 CIKQ--SHPTVQTIVYPNKG 264
+ P V YPN G
Sbjct: 238 TAARVTGKPVV---AYPNSG 254
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 144/313 (46%), Gaps = 32/313 (10%)
Query: 264 GVKLLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
G +LDG ++Q+ + H + D LWS+ L +PEA H + + +
Sbjct: 12 GPLVLDGGLSNQLEAAGHDLGDA----LWSARLLADDPEAITRAHLAYFEAGADVVITSS 67
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ----TA 377
T ++ + A+L+A +VE+ A + P+ + A
Sbjct: 68 YQATF----EGFARRGIGGQRAAELLAL---SVESARE--AARRARVGPAGGAGRRLWVA 118
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
AS GPYG +L DGSEY G Y + +L +HRP +E L A D LALET+P EA+
Sbjct: 119 ASAGPYGAMLADGSEYRGRY--GLDVGELERFHRPRLEVLAAARPDVLALETVPDTVEAV 176
Query: 438 ALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
AL++ +R G AWLS++ D T G+ + A L A+ +++ A+GVNC P V
Sbjct: 177 ALLRAVRGL-GVPAWLSYTVDGD-RTRAGQPLEEAF--ALAADAEEVVAVGVNCCAPGDV 232
Query: 498 STLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
S VR + P V YPN G VWD+ W V +W G ++G
Sbjct: 233 SGAVRTAARVTGKPVV---AYPNSGEVWDARARAWRGR--SLFAPRLVREWRAAGARLVG 287
Query: 556 GCCEVTSYEIQQM 568
GCC V I+ +
Sbjct: 288 GCCRVGPDAIRSI 300
>gi|409385377|ref|ZP_11238022.1| Homocysteine S-methyltransferase [Lactococcus raffinolactis 4877]
gi|399207218|emb|CCK18937.1| Homocysteine S-methyltransferase [Lactococcus raffinolactis 4877]
Length = 305
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 138/262 (52%), Gaps = 29/262 (11%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDGS + + ++ H LW+++ L +PEA + H+ + AGA++ ++ YQA
Sbjct: 12 VVILDGSMSRLLEEQGLEI--NHRLWTALALVEQPEAIYQVHKQYFDAGANVAITATYQA 69
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD--KENQTPDINLNKTFNLLTGHIETAASI 124
V + +GYSE++A+D + SV L AK K +QT + A S+
Sbjct: 70 TVKSFADVGYSEEQAIDFIKHSVTLAQKAKQDSKGDQTKWL---------------AGSV 114
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSEY+G Y ++ +D+ +H ++ L+ +GVD LA+ETIP E ++
Sbjct: 115 GPYGAYLSDGSEYTGAY--QLSSSDMKTFHESRIKTLIASGVDVLAIETIPRLDELRVIL 172
Query: 185 KLLR--EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++ FP W+S S KD H ++G+ +S L+ + A G+NCV P V+
Sbjct: 173 DIVAAVNFP---VWVSVSLKDTVHLANGDSLSD--FQQLVEQDQNVIAYGINCVSPQLVA 227
Query: 243 TLVRCIKQSHPTVQTIVYPNKG 264
++ + + T + YPN G
Sbjct: 228 PVIETLSVA-ATKPLVAYPNSG 248
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 148/311 (47%), Gaps = 32/311 (10%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V +LDGS + + ++ H LW+++ L +PEA + H+ + A +
Sbjct: 12 VVILDGSMSRLLEEQGLEI--NHRLWTALALVEQPEAIYQVHKQYFDAGANVAITATYQA 69
Query: 325 TVLRDGSEYSGHYVD-SMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPY 383
TV + D +E I + + +V +A D K + A S+GPY
Sbjct: 70 TV--------KSFADVGYSEEQAIDFIKHSVTLAQKAKQDS----KGDQTKWLAGSVGPY 117
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L DGSEY+G Y ++ +D+ +H ++ L+ +GVD LA+ETIP E ++ ++
Sbjct: 118 GAYLSDGSEYTGAY--QLSSSDMKTFHESRIKTLIASGVDVLAIETIPRLDELRVILDIV 175
Query: 444 R--EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
FP W+S S KD H ++G+ +S L+ + A G+NCV P V+ ++
Sbjct: 176 AAVNFP---VWVSVSLKDTVHLANGDSLSD--FQQLVEQDQNVIAYGINCVSPQLVAPVI 230
Query: 502 RCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQ----WLEEGVNIIGGC 557
+ + T + YPN G ++D+V W +E S+ W ++G +IGGC
Sbjct: 231 ETLSVA-ATKPLVAYPNSGAIFDAVTKTW---SEEISVEQVFSADARCWHQKGAKLIGGC 286
Query: 558 CEVTSYEIQQM 568
C T +I ++
Sbjct: 287 CCSTEQDIARI 297
>gi|255581651|ref|XP_002531629.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
[Ricinus communis]
gi|223528747|gb|EEF30757.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
[Ricinus communis]
Length = 327
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 136/265 (51%), Gaps = 15/265 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG F +Q+ H D PLWS++ L +PE H +++ AGADI+ +S YQA +
Sbjct: 22 VIDGGFATQLETHGAAIND--PLWSALCLIKDPELIKRVHLEYLEAGADILVTSSYQATL 79
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G + +E LL KSV+L A+DK N +N AASIG YG
Sbjct: 80 PGFMSKGLTIEEGELLLKKSVKLAIEARDKFWDAVKRNPLHRYN----RALVAASIGSYG 135
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEYSG+Y + L +HR ++ L AG D LA ETIP + EA A V+LL
Sbjct: 136 AYLADGSEYSGYYGPDVNLEKLKDFHRHRLQVLAEAGPDLLAFETIPNKLEAEACVELLE 195
Query: 189 EFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCL--LANPDQIQAIGVNCVRPSHVSTLV 245
E + +W+ FS D + GE + CL + +++ A G+NC P + +L+
Sbjct: 196 EENIKIPSWICFSSVDGENAPSGE----SFQECLDVINKSNKVVAAGINCAPPHFIESLI 251
Query: 246 RCIKQSHPTVQTIVYPNKGVKLLDG 270
C + +VYPN G ++ DG
Sbjct: 252 -CKFKKLTQKFVVVYPNSG-EIWDG 274
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 153/343 (44%), Gaps = 36/343 (10%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+++ ++ ++ G ++DG F +Q+ H D PLWS++ L +PE H
Sbjct: 3 VEKRRSLLEDLIEKAGGCAVIDGGFATQLETHGAAIND--PLWSALCLIKDPELIKRVHL 60
Query: 308 DFIRGHIE---------TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV 358
+++ + T G + +G V EA W L
Sbjct: 61 EYLEAGADILVTSSYQATLPGFMSKGLTIEEGELLLKKSVKLAIEARDKFWDAVKRNPLH 120
Query: 359 RAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV 418
R + AASIG YG L DGSEYSG+Y + L +HR ++ L
Sbjct: 121 RYN-----------RALVAASIGSYGAYLADGSEYSGYYGPDVNLEKLKDFHRHRLQVLA 169
Query: 419 RAGVDYLALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCL 477
AG D LA ETIP + EA A V+LL E + +W+ FS D + GE + CL
Sbjct: 170 EAGPDLLAFETIPNKLEAEACVELLEEENIKIPSWICFSSVDGENAPSGE----SFQECL 225
Query: 478 --LANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDT-- 533
+ +++ A G+NC P + +L+ C + +VYPN G +WD +WL +
Sbjct: 226 DVINKSNKVVAAGINCAPPHFIESLI-CKFKKLTQKFVVVYPNSGEIWDGRAKRWLPSAC 284
Query: 534 --EDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDE 574
+D++ + +W + G N+IGGCC T I+ + ++ E
Sbjct: 285 FNDDKFEF--FATRWHDLGANLIGGCCRTTPSTIRAISKVLKE 325
>gi|294792995|ref|ZP_06758141.1| homocysteine S-methyltransferase [Veillonella sp. 6_1_27]
gi|294455940|gb|EFG24304.1| homocysteine S-methyltransferase [Veillonella sp. 6_1_27]
Length = 337
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 143/277 (51%), Gaps = 30/277 (10%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R+ D+ H LWS+ L +P+ + H ++ AGADIIQSS YQA V
Sbjct: 18 VLDGALGTELERYGC-DIQ-HKLWSAKVLMDQPDIIKKIHISYLAAGADIIQSSGYQATV 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK-----------------ENQTPDINLNKTF 111
LGY +EA++L+ SV+L A+++ +TP+ +
Sbjct: 76 AGFKGLGYGTEEAIELVKLSVRLAVQARNEFLEAKASGALTLHGIKLGEETPEGVRYFSE 135
Query: 112 NLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 171
L + AAS+GPYG L DGSEY G Y D TE L +H P + D L+
Sbjct: 136 GALPKPL-VAASVGPYGAFLADGSEYRG-YPDVQTEY-LEIFHIPRLALFCEEHPDILSF 192
Query: 172 ETIPAEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 228
ETIP+ EA+A+ + + + G W++FSCKD H S GE I +P I
Sbjct: 193 ETIPSYAEAIAIARAMSDPFTSKGIPGWIAFSCKDGHHVSSGETIIKCAQMIDKVHP--I 250
Query: 229 QAIGVNCVRPSHVSTLVRCIKQSHPTVQTI-VYPNKG 264
IG+NC +P +V +L++ I+ T + I VYPN G
Sbjct: 251 TGIGINCSKPEYVESLIKDIRTV--TDKPIAVYPNLG 285
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 152/329 (46%), Gaps = 40/329 (12%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
+ KG +LDG+ +++ R+ D+ H LWS+ L +P+ + H ++ +
Sbjct: 10 IIKEKGALVLDGALGTELERYGC-DIQ-HKLWSAKVLMDQPDIIKKIHISYLAAGADIIQ 67
Query: 319 SIGPYGTV-----LRDGSEYSGHYV-----------DSMTEADL---IAWHRPNVEALVR 359
S G TV L G+E + V + EA + H +
Sbjct: 68 SSGYQATVAGFKGLGYGTEEAIELVKLSVRLAVQARNEFLEAKASGALTLHGIKLGEETP 127
Query: 360 AGVDYL---ALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA 416
GV Y AL KP + AAS+GPYG L DGSEY G Y D TE L +H P +
Sbjct: 128 EGVRYFSEGALPKPLV----AASVGPYGAFLADGSEYRG-YPDVQTEY-LEIFHIPRLAL 181
Query: 417 LVRAGVDYLALETIPAEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSAV 473
D L+ ETIP+ EA+A+ + + + G W++FSCKD H S GE I
Sbjct: 182 FCEEHPDILSFETIPSYAEAIAIARAMSDPFTSKGIPGWIAFSCKDGHHVSSGETIIKCA 241
Query: 474 TSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTI-VYPNKGGVWDSVHMKWLD 532
+P I IG+NC +P +V +L++ I+ T + I VYPN G +DS W
Sbjct: 242 QMIDKVHP--ITGIGINCSKPEYVESLIKDIRTV--TDKPIAVYPNLGESYDSKTKTWYG 297
Query: 533 TEDEYSILHYVPQWLEEGVNIIGGCCEVT 561
D S + YV W + G IIGGCC T
Sbjct: 298 --DAASFVDYVEVWRKAGAEIIGGCCRTT 324
>gi|115489490|ref|NP_001067232.1| Os12g0607000 [Oryza sativa Japonica Group]
gi|108862937|gb|ABA99257.2| Homocysteine S-methyltransferase 3, putative, expressed [Oryza
sativa Japonica Group]
gi|113649739|dbj|BAF30251.1| Os12g0607000 [Oryza sativa Japonica Group]
gi|125580011|gb|EAZ21157.1| hypothetical protein OsJ_36805 [Oryza sativa Japonica Group]
gi|385717680|gb|AFI71275.1| homocysteine S-methyltransferase 3 [Oryza sativa Japonica Group]
Length = 342
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 138/259 (53%), Gaps = 16/259 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG +++ + D PLWS+ L + P + H D++ AGA+II ++ YQA +
Sbjct: 31 VMDGGLATELEANGADLND--PLWSAKCLLSSPHLVRKVHLDYLEAGANIIITASYQATI 88
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH-IETAASIGPY 127
G+S++++ DLL KSV++ A+D + L + + H I AASIG Y
Sbjct: 89 QGFESKGFSKEQSEDLLAKSVEIAREARD-------MFLKEHSDRPIQHPILVAASIGSY 141
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEYSG Y ++ T L +H+ +E L AG D +A ETIP + EA A V+LL
Sbjct: 142 GAYLADGSEYSGDYGEAGTLEFLKDFHKRRLEVLAEAGPDLIAFETIPNKLEAQAYVELL 201
Query: 188 REFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIGVNCVRPSHVSTLV 245
E AW SF+ KD H G+ S + +AN ++ A+G+NC P + L+
Sbjct: 202 DECNISIPAWFSFNSKDGVHIVSGD---SLIECATIANGCSKVGAVGINCTPPRFIHGLI 258
Query: 246 RCIKQSHPTVQTIVYPNKG 264
I++ ++YPN G
Sbjct: 259 LSIRKVTDK-PILIYPNSG 276
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 151/318 (47%), Gaps = 22/318 (6%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
V G ++DG +++ + D PLWS+ L + P + H D++
Sbjct: 23 VEAGGGRLVMDGGLATELEANGADLND--PLWSAKCLLSSPHLVRKVHLDYLEAGANIII 80
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--- 375
+ T+ G E G + +E DL+A +VE + R D Q
Sbjct: 81 TASYQATI--QGFESKG-FSKEQSE-DLLA---KSVE-IAREARDMFLKEHSDRPIQHPI 132
Query: 376 -TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 434
AASIG YG L DGSEYSG Y ++ T L +H+ +E L AG D +A ETIP +
Sbjct: 133 LVAASIGSYGAYLADGSEYSGDYGEAGTLEFLKDFHKRRLEVLAEAGPDLIAFETIPNKL 192
Query: 435 EALALVKLLREFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIGVNCV 492
EA A V+LL E AW SF+ KD H G+ S + +AN ++ A+G+NC
Sbjct: 193 EAQAYVELLDECNISIPAWFSFNSKDGVHIVSGD---SLIECATIANGCSKVGAVGINCT 249
Query: 493 RPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE--DEYSILHYVPQWLEEG 550
P + L+ I++ ++YPN G +D+ +W+++ + + YV +W ++G
Sbjct: 250 PPRFIHGLILSIRKVTDK-PILIYPNSGERYDAEKKEWVESTGVSDGDFVSYVNEWCKDG 308
Query: 551 VNIIGGCCEVTSYEIQQM 568
+IGGCC T I+ +
Sbjct: 309 AVLIGGCCRTTPNTIKAI 326
>gi|125537333|gb|EAY83821.1| hypothetical protein OsI_39039 [Oryza sativa Indica Group]
Length = 342
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 138/259 (53%), Gaps = 16/259 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG +++ + D PLWS+ L + P + H D++ AGA+II ++ YQA +
Sbjct: 31 VMDGGLATELEANGADLND--PLWSAKCLLSSPHLVRKVHLDYLEAGANIIITASYQATI 88
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH-IETAASIGPY 127
G+S++++ DLL KSV++ A+D + L + + H I AASIG Y
Sbjct: 89 QGFESKGFSKEQSEDLLAKSVEIAREARD-------MFLKEHSDRPIQHPILVAASIGSY 141
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEYSG Y ++ T L +H+ +E L AG D +A ETIP + EA A V+LL
Sbjct: 142 GAYLADGSEYSGDYGEAGTLEFLKDFHKRRLEVLAEAGPDLIAFETIPNKLEAQAYVELL 201
Query: 188 REFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIGVNCVRPSHVSTLV 245
E AW SF+ KD H G+ S + +AN ++ A+G+NC P + L+
Sbjct: 202 DECNISIPAWFSFNSKDGVHIVSGD---SLIECATIANGCSKVGAVGINCTPPRFIHGLI 258
Query: 246 RCIKQSHPTVQTIVYPNKG 264
I++ ++YPN G
Sbjct: 259 LSIRKVTDK-PMLIYPNSG 276
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 151/318 (47%), Gaps = 22/318 (6%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
V G ++DG +++ + D PLWS+ L + P + H D++
Sbjct: 23 VEAGGGRLVMDGGLATELEANGADLND--PLWSAKCLLSSPHLVRKVHLDYLEAGANIII 80
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--- 375
+ T+ G E G + +E DL+A +VE + R D Q
Sbjct: 81 TASYQATI--QGFESKG-FSKEQSE-DLLA---KSVE-IAREARDMFLKEHSDRPIQHPI 132
Query: 376 -TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 434
AASIG YG L DGSEYSG Y ++ T L +H+ +E L AG D +A ETIP +
Sbjct: 133 LVAASIGSYGAYLADGSEYSGDYGEAGTLEFLKDFHKRRLEVLAEAGPDLIAFETIPNKL 192
Query: 435 EALALVKLLREFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIGVNCV 492
EA A V+LL E AW SF+ KD H G+ S + +AN ++ A+G+NC
Sbjct: 193 EAQAYVELLDECNISIPAWFSFNSKDGVHIVSGD---SLIECATIANGCSKVGAVGINCT 249
Query: 493 RPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE--DEYSILHYVPQWLEEG 550
P + L+ I++ ++YPN G +D+ +W+++ + + YV +W ++G
Sbjct: 250 PPRFIHGLILSIRKVTDK-PMLIYPNSGERYDAEKKEWVESTGVSDGDFVSYVNEWCKDG 308
Query: 551 VNIIGGCCEVTSYEIQQM 568
+IGGCC T I+ +
Sbjct: 309 AVLIGGCCRTTPNTIKAI 326
>gi|388491598|gb|AFK33865.1| unknown [Lotus japonicus]
Length = 328
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 136/278 (48%), Gaps = 15/278 (5%)
Query: 11 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDN 70
DG F +Q+ +H D PLWS+V L +P + H +++ AGA+I+ +S YQA +
Sbjct: 25 DGGFATQLEKHGASFTD--PLWSAVCLIKDPHLIKKVHLEYLEAGANILVTSSYQATLPG 82
Query: 71 LTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
G S +E LL +SV+L A+D N + + AASIG YG
Sbjct: 83 FLARGLSIEEGEMLLKRSVKLAVEARDSFWNFSKRNPSNKYR----QALVAASIGSYGAY 138
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 190
L DGSEY G Y +T L +HR ++ LV G D LA ETIP + EA ALV+LL E
Sbjct: 139 LADGSEYRGLYGPDVTLEKLKDFHRRRLQVLVETGPDLLAFETIPNKIEAQALVELLEEE 198
Query: 191 PGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLA--NPDQIQAIGVNCVRPSHVSTLVRC 247
Q +W+ F+ D + E + CL A D++ A+G+NC P + L+
Sbjct: 199 NVQIPSWICFTSVDGENAPSRE----SFKDCLEAINKSDKVGAVGINCAPPHFMENLICK 254
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD 285
KQ IVYPN G ++ DG + D D
Sbjct: 255 FKQLTKKA-IIVYPNSG-EVWDGRAKKWLPSKCFHDED 290
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/317 (34%), Positives = 152/317 (47%), Gaps = 32/317 (10%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASI--- 320
G + DG F +Q+ +H D PLWS+V L +P + H +++ E A+I
Sbjct: 20 GCAVTDGGFATQLEKHGASFTD--PLWSAVCLIKDPHLIKKVHLEYL----EAGANILVT 73
Query: 321 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ----- 375
Y L G G S+ E +++ + +V+ V A + K + S++
Sbjct: 74 SSYQATL-PGFLARGL---SIEEGEMLL--KRSVKLAVEARDSFWNFSKRNPSNKYRQAL 127
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
AASIG YG L DGSEY G Y +T L +HR ++ LV G D LA ETIP + E
Sbjct: 128 VAASIGSYGAYLADGSEYRGLYGPDVTLEKLKDFHRRRLQVLVETGPDLLAFETIPNKIE 187
Query: 436 ALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLA--NPDQIQAIGVNCV 492
A ALV+LL E Q +W+ F+ D + E + CL A D++ A+G+NC
Sbjct: 188 AQALVELLEEENVQIPSWICFTSVDGENAPSRE----SFKDCLEAINKSDKVGAVGINCA 243
Query: 493 RPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE---DEYSILHYVPQWLEE 549
P + L+ KQ IVYPN G VWD KWL ++ DE H +W +
Sbjct: 244 PPHFMENLICKFKQLTKKA-IIVYPNSGEVWDGRAKKWLPSKCFHDEDFGFH-ATRWRDL 301
Query: 550 GVNIIGGCCEVTSYEIQ 566
G IIGGCC T IQ
Sbjct: 302 GAKIIGGCCRTTPSTIQ 318
>gi|224285542|gb|ACN40491.1| unknown [Picea sitchensis]
Length = 348
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 143/292 (48%), Gaps = 15/292 (5%)
Query: 1 MSKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQ 60
+ ++ ++DG +Q+ H D PLWS L P + H++++ AGA+II
Sbjct: 16 LQQVGGFGVIDGGLATQLESHGADLND--PLWSGRCLIESPHLIQKVHQEYLEAGAEIII 73
Query: 61 SSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLL----TG 116
++ YQA + G S E LL +SV++ A+D+ + +LN + +
Sbjct: 74 TASYQATIQGFESRGLSITEGEALLRRSVEIACEARDQFWKKCAESLNGSVDDAQIPKVR 133
Query: 117 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA 176
I AAS+G YG L DGSEYSG Y MT L +HR V+ L +G D LA ETIP
Sbjct: 134 PILVAASVGSYGAYLADGSEYSGDYGPGMTVHTLKDFHRGRVQVLADSGADLLAFETIPN 193
Query: 177 EKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSC--LLANPDQIQAIGV 233
+ EA A ++LL E Q AW SF+ KD + G+ + T C L + + A+G+
Sbjct: 194 KLEAQAYIELLEENDIQIPAWFSFNSKDGVNVVSGD----SFTECAALADSCTNVVAVGI 249
Query: 234 NCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD 285
NC P + L+ I Q +VYPN G + D V+ + DVD
Sbjct: 250 NCTPPRFIHGLILSI-QKVTAKPILVYPNSG-ETYDADRKQWVASTGVSDVD 299
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 148/323 (45%), Gaps = 32/323 (9%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G ++DG +Q+ H D PLWS L P + H++++ E +
Sbjct: 21 GFGVIDGGLATQLESHGADLND--PLWSGRCLIESPHLIQKVHQEYLEAGAEIIITASYQ 78
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT------- 376
T+ G E G S+TE + A R +VE A + S++
Sbjct: 79 ATI--QGFESRGL---SITEGE--ALLRRSVEIACEARDQFWKKCAESLNGSVDDAQIPK 131
Query: 377 ------AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI 430
AAS+G YG L DGSEYSG Y MT L +HR V+ L +G D LA ETI
Sbjct: 132 VRPILVAASVGSYGAYLADGSEYSGDYGPGMTVHTLKDFHRGRVQVLADSGADLLAFETI 191
Query: 431 PAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSC--LLANPDQIQAI 487
P + EA A ++LL E Q AW SF+ KD + G+ + T C L + + A+
Sbjct: 192 PNKLEAQAYIELLEENDIQIPAWFSFNSKDGVNVVSGD----SFTECAALADSCTNVVAV 247
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE--DEYSILHYVPQ 545
G+NC P + L+ I Q +VYPN G +D+ +W+ + + + YV +
Sbjct: 248 GINCTPPRFIHGLILSI-QKVTAKPILVYPNSGETYDADRKQWVASTGVSDVDFVSYVQK 306
Query: 546 WLEEGVNIIGGCCEVTSYEIQQM 568
W E G ++IGGCC T I+ +
Sbjct: 307 WQEIGASLIGGCCRTTPNTIKAI 329
>gi|422876517|ref|ZP_16922987.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1056]
gi|332361325|gb|EGJ39129.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1056]
Length = 315
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 143/264 (54%), Gaps = 20/264 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ +LDG+ +++ +V G LWS+ YL +P+ H ++RAG+DII +S YQ
Sbjct: 12 EIIILDGALGTELESLGY-NVSGK-LWSAQYLLDQPQIIQNVHESYVRAGSDIITTSSYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAAS 123
A++ + G + ++A +LL ++V L A + +P+ + + L+ G S
Sbjct: 70 ASIPAFIEAGLTPEKAYNLLKETVFLAQKAIENIWIGLSPEEQKQRPYPLVAG------S 123
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPY L DGSEY+G Y ++E + +HRP ++AL+ AG D LA+ETIP E A+
Sbjct: 124 VGPYAAYLADGSEYTGDY--QLSEEEYRDFHRPRIQALLEAGSDLLAIETIPNGAETAAI 181
Query: 184 VKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++LL EFP +A+LSF + + S G I L Q+ A+G NC P ++
Sbjct: 182 LRLLVEEFPQAEAYLSFVAQSENAISDGTKIEE--LGNLAQESPQVLAVGFNCTAPHLIA 239
Query: 243 TLVRCIKQ--SHPTVQTIVYPNKG 264
+L+ + Q + P + YPN G
Sbjct: 240 SLLGRLGQVCNKP---LLTYPNSG 260
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 152/318 (47%), Gaps = 35/318 (11%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ +LDG+ +++ +V G LWS+ YL +P+ H ++R G
Sbjct: 13 IIILDGALGTELESLGY-NVSGK-LWSAQYLLDQPQIIQNVHESYVRA-----------G 59
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA----LVRAGVDYLAL-IKPSISSQ---- 375
+ + S Y + + EA L N+ L + ++ + + + P Q
Sbjct: 60 SDIITTSSYQAS-IPAFIEAGLTPEKAYNLLKETVFLAQKAIENIWIGLSPEEQKQRPYP 118
Query: 376 -TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 434
A S+GPY L DGSEY+G Y ++E + +HRP ++AL+ AG D LA+ETIP
Sbjct: 119 LVAGSVGPYAAYLADGSEYTGDY--QLSEEEYRDFHRPRIQALLEAGSDLLAIETIPNGA 176
Query: 435 EALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
E A+++LL EFP +A+LSF + + S G I L Q+ A+G NC
Sbjct: 177 ETAAILRLLVEEFPQAEAYLSFVAQSENAISDGTKIEE--LGNLAQESPQVLAVGFNCTA 234
Query: 494 PSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEG 550
P +++L+ + Q + P + YPN G ++ + W D E E S+L W E+G
Sbjct: 235 PHLIASLLGRLGQVCNKP---LLTYPNSGETYNGLTKTWHDDPEQERSLLENSKLWQEQG 291
Query: 551 VNIIGGCCEVTSYEIQQM 568
V + GGCC +I Q+
Sbjct: 292 VRLFGGCCRTRPEDIAQL 309
>gi|425735249|ref|ZP_18853564.1| homocysteine methyltransferase [Brevibacterium casei S18]
gi|425480177|gb|EKU47346.1| homocysteine methyltransferase [Brevibacterium casei S18]
Length = 318
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 161/351 (45%), Gaps = 59/351 (16%)
Query: 236 VRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVY 294
+RP + L ++ P V DG T+ SR + D H LWS+
Sbjct: 1 MRPRLTAVLETAVRSRRPLVT------------DGGLGTALESRGIVLD---HDLWSAGL 45
Query: 295 LTTEPEACVETHRDFIRG--HIETAAS--IGPYGTVLRDGSEYSGHYVDSMTEADLIAWH 350
L +P+ E H F R I T AS IGP R G +G +T+
Sbjct: 46 LRDDPDTLAEVHAAFARAGADIVTTASYQIGP-----RAGLTDTG-----LTD------- 88
Query: 351 RPNVEALVRAGVDYLALIKPSISSQTAA------SIGPYGTVLRDGSEYSGHYVDSMTEA 404
A+ R D + L + + S TAA S+GP+G VL DGSEY+G Y ++T+A
Sbjct: 89 ----TAVRRLCADSVTLAREAASRGTAAPVLIAGSVGPFGAVLGDGSEYTGDY--ALTDA 142
Query: 405 DLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTS 464
+ A+HRP +EAL AG D +ALET P E L L+ E AWLS + D T
Sbjct: 143 EFAAFHRPRIEALAEAGADVIALETQPNLPEIRVLADLV-EGTRVPAWLSVTLADGGPTG 201
Query: 465 HGELIS----SAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 520
L +A+ A+P ++A+GVNCVRP+ VS + + + I YPN G
Sbjct: 202 VPRLPDGTPLTALAEVAAAHP-TVRAVGVNCVRPAQVSPALEALAAVS-DLPLIAYPNSG 259
Query: 521 GVWDSVHMKWLD-TEDEYSILHYVP--QWLEEGVNIIGGCCEVTSYEIQQM 568
+D+ M W D T + L P W+ G I+GGCC T +I ++
Sbjct: 260 ETYDAESMTWQDPTAEAGERLGAWPVADWIARGARIVGGCCRTTPADIAEL 310
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 126/260 (48%), Gaps = 28/260 (10%)
Query: 11 DGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVD 69
DG T+ SR + D H LWS+ L +P+ E H F RAGADI+ ++ YQ
Sbjct: 22 DGGLGTALESRGIVLD---HDLWSAGLLRDDPDTLAEVHAAFARAGADIVTTASYQIGPR 78
Query: 70 -NLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
LT G ++ L SV L A + P + A S+GP+G
Sbjct: 79 AGLTDTGLTDTAVRRLCADSVTLAREAASRGTAAP--------------VLIAGSVGPFG 124
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
VL DGSEY+G Y ++T+A+ A+HRP +EAL AG D +ALET P E L L+
Sbjct: 125 AVLGDGSEYTGDY--ALTDAEFAAFHRPRIEALAEAGADVIALETQPNLPEIRVLADLV- 181
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELIS----SAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
E AWLS + D T L +A+ A+P ++A+GVNCVRP+ VS
Sbjct: 182 EGTRVPAWLSVTLADGGPTGVPRLPDGTPLTALAEVAAAHP-TVRAVGVNCVRPAQVSPA 240
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
+ + + I YPN G
Sbjct: 241 LEALAAVS-DLPLIAYPNSG 259
>gi|162464283|ref|NP_001105013.1| homocysteine S-methyltransferase 3 [Zea mays]
gi|50400643|sp|Q9FUM8.1|HMT3_MAIZE RecName: Full=Homocysteine S-methyltransferase 3; AltName:
Full=S-methylmethionine:homocysteine methyltransferase
3; Short=SMM:Hcy S-methyltransferase 3; AltName:
Full=ZmHMT-3
gi|10732789|gb|AAG22539.1|AF297046_1 homocysteine S-methyltransferase-3 [Zea mays]
gi|219886333|gb|ACL53541.1| unknown [Zea mays]
gi|224034199|gb|ACN36175.1| unknown [Zea mays]
gi|414877961|tpg|DAA55092.1| TPA: homocysteine S-methyltransferase 3 [Zea mays]
Length = 338
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 146/285 (51%), Gaps = 25/285 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +++ + D PLWS+ L + P + H D++ AGA+II ++ YQA +
Sbjct: 25 VLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATI 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK------ENQTPDINLNKTFNLLTGHIETAA 122
G+S++++ +LL KSVQ+ A++ E TP + I AA
Sbjct: 83 QGFESKGFSKEQSENLLTKSVQIALEAREMFLKEHLEKSTP----------IQHPILVAA 132
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
++G YG L DGSEYSG Y ++ T+ L +HR ++ L AG D +A ETIP + EA A
Sbjct: 133 ALGSYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQA 192
Query: 183 LVKLLREFP-GQKAWLSFSCKDDTHTSHGE-LISSAVTSCLLANPDQIQAIGVNCVRPSH 240
V+LL E +WLSF+ KD H G+ LI A + A ++ A+G+NC P
Sbjct: 193 YVELLEECNINIPSWLSFNSKDGVHVVSGDSLIECATIADKCA---KVGAVGINCTPPRF 249
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD 285
+ L+ I++ ++YPN G + DG V + D D
Sbjct: 250 IHGLILSIRKVTDK-PILIYPNSGER-YDGEKKEWVESTGVSDGD 292
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 155/319 (48%), Gaps = 20/319 (6%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G +LDG +++ + D PLWS+ L + P + H D++ +
Sbjct: 22 GRLVLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQ 79
Query: 324 GTVLRDGSEYSGHYVDS----MTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAAS 379
T+ G E G + +T++ IA E ++ ++ I+ I AA+
Sbjct: 80 ATI--QGFESKGFSKEQSENLLTKSVQIALEAR--EMFLKEHLEKSTPIQHPI--LVAAA 133
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
+G YG L DGSEYSG Y ++ T+ L +HR ++ L AG D +A ETIP + EA A
Sbjct: 134 LGSYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQAY 193
Query: 440 VKLLREFP-GQKAWLSFSCKDDTHTSHGE-LISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
V+LL E +WLSF+ KD H G+ LI A + A ++ A+G+NC P +
Sbjct: 194 VELLEECNINIPSWLSFNSKDGVHVVSGDSLIECATIADKCA---KVGAVGINCTPPRFI 250
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE--DEYSILHYVPQWLEEGVNIIG 555
L+ I++ ++YPN G +D +W+++ + + YV +W ++G +IG
Sbjct: 251 HGLILSIRKVTDK-PILIYPNSGERYDGEKKEWVESTGVSDGDFVSYVNEWCKDGAALIG 309
Query: 556 GCCEVTSYEIQQMRIMIDE 574
GCC T I+ + +++
Sbjct: 310 GCCRTTPNTIRAIHRTLNQ 328
>gi|386843290|ref|YP_006248348.1| homocysteine methyltransferase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374103591|gb|AEY92475.1| homocysteine methyltransferase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451796581|gb|AGF66630.1| homocysteine methyltransferase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 309
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 130/258 (50%), Gaps = 23/258 (8%)
Query: 9 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG ++Q+ + H + D LWS+ L PEA E H + AGA + +S YQA
Sbjct: 21 VLDGGMSNQLESAGHDLSD----ELWSARLLAERPEAVTEAHLAYYLAGASVAITSSYQA 76
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ K G EA LL SV+L A+D + + + + AAS+GP
Sbjct: 77 TFEGFGKRGIGRDEAARLLGLSVEL---ARDAARKAQGAGVPRPLWV-------AASVGP 126
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L DGSEY G Y M+ +L +HRP +E L A D LALET+P EA AL++
Sbjct: 127 YGAMLADGSEYRGRY--GMSVDELERFHRPRMEVLAAAAPDVLALETVPDADEAAALLRA 184
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R G AWLS++ + T G+ + A L A+ D++ A+GVNC P V V
Sbjct: 185 VRGL-GMPAWLSYTV-EGLRTRAGQPLEEAFG--LAADADEVIAVGVNCCAPEDVRGAVE 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
I +VYPN G
Sbjct: 241 -IAARVTGKPVVVYPNSG 257
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 117/356 (32%), Gaps = 127/356 (35%)
Query: 264 GVKLLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETH--------------- 306
G +LDG ++Q+ + H + D LWS+ L PEA E H
Sbjct: 18 GTVVLDGGMSNQLESAGHDLSD----ELWSARLLAERPEAVTEAHLAYYLAGASVAITSS 73
Query: 307 -----------------------------RDFIRGH--------IETAASIGPYGTVLRD 329
RD R + AAS+GPYG +L D
Sbjct: 74 YQATFEGFGKRGIGRDEAARLLGLSVELARDAARKAQGAGVPRPLWVAASVGPYGAMLAD 133
Query: 330 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRD 389
GSEY G Y M+ +L +HRP +E L A D LAL + + AA +LR
Sbjct: 134 GSEYRGRY--GMSVDELERFHRPRMEVLAAAAPDVLALETVPDADEAAA-------LLR- 183
Query: 390 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQ 449
++ + AW VE LR GQ
Sbjct: 184 ----------AVRGLGMPAWLSYTVEG--------------------------LRTRAGQ 207
Query: 450 KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHP 509
+F D E+I+ V C P+ ++ V R +
Sbjct: 208 PLEEAFGLAADAD----EVIAVGVNCC---APEDVR---------GAVEIAARVTGKP-- 249
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
+VYPN G WD+ W + V W E G +IGGCC V I
Sbjct: 250 ---VVVYPNSGEAWDARARAWRGRTTFGA--EQVKAWREAGARLIGGCCRVGPQAI 300
>gi|6094303|sp|P56707.1|SMTA_ASTBI RecName: Full=Selenocysteine methyltransferase; Short=SECYS-MT;
Short=SECYS-methyltransferase
gi|4006848|emb|CAA10368.1| selenocysteine methyltransferase [Astragalus bisulcatus]
Length = 338
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 139/272 (51%), Gaps = 26/272 (9%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ ++ G +++ RH D PLWS+ L + P + H D++ GADII ++ YQ
Sbjct: 15 RAAVIAGGLGTELQRHGADLND--PLWSAKCLLSCPHLIRQVHLDYLENGADIIITASYQ 72
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKD----KENQTPDINLNKTFNLLTGHIETA 121
A + G+S++E LL +SV++ A+D + ++ N + + L I A
Sbjct: 73 ATIQGFKAKGFSDEEGEALLRRSVEIAREARDLYYQRCAESSSDNGDDSRILKQRPILIA 132
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
S+G YG L DGSE+SG+Y D++ L +HR V+ L +GVD LA E +P + EA
Sbjct: 133 GSVGSYGAYLADGSEFSGNYGDAIKSETLKDFHRRKVQILADSGVDLLAFEAVPNKLEAQ 192
Query: 182 ALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVN 234
A LL E P AW +F+ KD + G+ I S SC D++ A+G+N
Sbjct: 193 AYADLLEEENIITP---AWFAFTSKDGNNVVSGDSIEECGSIAESC-----DKVVAVGIN 244
Query: 235 CVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKG 264
C P + L+ +K+ + P V +YPN G
Sbjct: 245 CTPPRFIHDLILLLKKVTAKPIV---IYPNSG 273
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 152/338 (44%), Gaps = 36/338 (10%)
Query: 251 SHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFI 310
S P + ++ ++ G +++ RH D PLWS+ L + P + H D++
Sbjct: 2 SSPLITDFLHQAGRAAVIAGGLGTELQRHGADLND--PLWSAKCLLSCPHLIRQVHLDYL 59
Query: 311 RGHIE---------TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG 361
+ T G +G V+ EA + + R E+ G
Sbjct: 60 ENGADIIITASYQATIQGFKAKGFSDEEGEALLRRSVEIAREARDLYYQR-CAESSSDNG 118
Query: 362 VDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG 421
D L + I A S+G YG L DGSE+SG+Y D++ L +HR V+ L +G
Sbjct: 119 DDSRILKQRPI--LIAGSVGSYGAYLADGSEFSGNYGDAIKSETLKDFHRRKVQILADSG 176
Query: 422 VDYLALETIPAEKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELI---SSAVT 474
VD LA E +P + EA A LL E P AW +F+ KD + G+ I S
Sbjct: 177 VDLLAFEAVPNKLEAQAYADLLEEENIITP---AWFAFTSKDGNNVVSGDSIEECGSIAE 233
Query: 475 SCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLD 532
SC D++ A+G+NC P + L+ +K+ + P V +YPN G +D++ +W
Sbjct: 234 SC-----DKVVAVGINCTPPRFIHDLILLLKKVTAKPIV---IYPNSGETYDAIRKEWGQ 285
Query: 533 TED--EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+ + YV +W E G +++GGCC T I+ +
Sbjct: 286 NSGVTDEDFVSYVDKWCESGASLVGGCCRTTPDTIRGI 323
>gi|195636122|gb|ACG37529.1| homocysteine S-methyltransferase 3 [Zea mays]
Length = 355
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 146/285 (51%), Gaps = 25/285 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +++ + D PLWS+ L + P + H D++ AGA+II ++ YQA +
Sbjct: 25 VLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATI 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK------ENQTPDINLNKTFNLLTGHIETAA 122
G+S++++ +LL KSVQ+ A++ E TP + I AA
Sbjct: 83 QGFESKGFSKEQSENLLTKSVQIALEAREMFLKEHLEKSTP----------IQHPILVAA 132
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
++G YG L DGSEYSG Y ++ T+ L +HR ++ L AG D +A ETIP + EA A
Sbjct: 133 ALGSYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQA 192
Query: 183 LVKLLREFP-GQKAWLSFSCKDDTHTSHGE-LISSAVTSCLLANPDQIQAIGVNCVRPSH 240
V+LL E +WLSF+ KD H G+ LI A + A ++ A+G+NC P
Sbjct: 193 YVELLEECNINIPSWLSFNSKDGVHVVSGDSLIECATIADKCA---KVGAVGINCTPPRF 249
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD 285
+ L+ I++ ++YPN G + DG V + D D
Sbjct: 250 IHGLILSIRKVTDK-PILIYPNSGER-YDGEKKEWVESTGVSDGD 292
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 155/319 (48%), Gaps = 20/319 (6%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G +LDG +++ + D PLWS+ L + P + H D++ +
Sbjct: 22 GRLVLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQ 79
Query: 324 GTVLRDGSEYSGHYVDS----MTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAAS 379
T+ G E G + +T++ IA E ++ ++ I+ I AA+
Sbjct: 80 ATI--QGFESKGFSKEQSENLLTKSVQIALEAR--EMFLKEHLEKSTPIQHPI--LVAAA 133
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
+G YG L DGSEYSG Y ++ T+ L +HR ++ L AG D +A ETIP + EA A
Sbjct: 134 LGSYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQAY 193
Query: 440 VKLLREFP-GQKAWLSFSCKDDTHTSHGE-LISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
V+LL E +WLSF+ KD H G+ LI A + A ++ A+G+NC P +
Sbjct: 194 VELLEECNINIPSWLSFNSKDGVHVVSGDSLIECATIADKCA---KVGAVGINCTPPRFI 250
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE--DEYSILHYVPQWLEEGVNIIG 555
L+ I++ ++YPN G +D +W+++ + + YV +W ++G +IG
Sbjct: 251 HGLILSIRKVTDK-PILIYPNSGERYDGEKKEWVESTGVSDGDFVSYVNEWCKDGAALIG 309
Query: 556 GCCEVTSYEIQQMRIMIDE 574
GCC T I+ + +++
Sbjct: 310 GCCRTTPNTIRAIHRTLNQ 328
>gi|400290207|ref|ZP_10792234.1| homocysteine methyltransferase [Streptococcus ratti FA-1 = DSM
20564]
gi|399920998|gb|EJN93815.1| homocysteine methyltransferase [Streptococcus ratti FA-1 = DSM
20564]
Length = 318
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 142/250 (56%), Gaps = 17/250 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL +P+ H ++R+G+DI+ +S YQA++ L G S++EA
Sbjct: 30 DVSGK-LWSAKYLLEDPDLIQSIHETYLRSGSDIVTTSSYQASLQGLCDYGLSQEEAEKT 88
Query: 85 LHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV 142
+ +V L A++K + + + + L++G +GPY L DGSEY+G Y
Sbjct: 89 IALTVDLAKKAREKVWQGLSEKEKHGRPYPLISG------DVGPYAAYLADGSEYTGDY- 141
Query: 143 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSC 201
S+ + L +HRP + L+ G D LALETIP+ EA AL +LL+ EFP +A++SF+
Sbjct: 142 GSIDKEGLKDFHRPRIAVLLEKGSDLLALETIPSFLEAKALTELLQEEFPAAEAYMSFTA 201
Query: 202 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIV-Y 260
++ + S G I V + L A P QI A+G+NC P + L++ K S T + +V Y
Sbjct: 202 QNSSSISDGTAIEE-VAALLDAAP-QILALGINCSSPLVYTDLLK--KMSTVTDKPLVTY 257
Query: 261 PNKGVKLLDG 270
PN G ++ DG
Sbjct: 258 PNSG-EVYDG 266
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 146/298 (48%), Gaps = 29/298 (9%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS-------IGPYGTVLRDGSEY 333
DV G LWS+ YL +P+ H ++R I T +S + YG + +
Sbjct: 30 DVSGK-LWSAKYLLEDPDLIQSIHETYLRSGSDIVTTSSYQASLQGLCDYGLSQEEAEKT 88
Query: 334 SGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEY 393
VD +A W + + G Y P IS +GPY L DGSEY
Sbjct: 89 IALTVDLAKKAREKVWQ--GLSEKEKHGRPY-----PLIS----GDVGPYAAYLADGSEY 137
Query: 394 SGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAW 452
+G Y S+ + L +HRP + L+ G D LALETIP+ EA AL +LL+ EFP +A+
Sbjct: 138 TGDY-GSIDKEGLKDFHRPRIAVLLEKGSDLLALETIPSFLEAKALTELLQEEFPAAEAY 196
Query: 453 LSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQ 512
+SF+ ++ + S G I V + L A P QI A+G+NC P + L++ K S T +
Sbjct: 197 MSFTAQNSSSISDGTAIEE-VAALLDAAP-QILALGINCSSPLVYTDLLK--KMSTVTDK 252
Query: 513 TIV-YPNKGGVWDSVHMKWLDTEDE-YSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+V YPN G V+D H W T D +++L W G I+GGCC +I+ +
Sbjct: 253 PLVTYPNSGEVYDGQHQTWTQTADRSHTLLENTVSWQNLGAKIVGGCCRTRPSDIESL 310
>gi|356572212|ref|XP_003554264.1| PREDICTED: selenocysteine methyltransferase-like [Glycine max]
Length = 333
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 138/270 (51%), Gaps = 27/270 (10%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG +++ RH D PLWS+ L + P + H D++ GADII ++ YQA +
Sbjct: 17 VIDGGLATELERHGADLND--PLWSAKCLFSFPHLIRQVHLDYLENGADIIITASYQATI 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKD----------KENQTPDINLNKTFNLLTGHI 118
GYS++E+ LL SV++ A++ + D + K +L
Sbjct: 75 QGFKAKGYSDEESEALLRSSVEIAREAREVYYKNCAGCRSGDGDDDGRILKQRPILV--- 131
Query: 119 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 178
AAS+G YG L DGSEYSG Y D++T L +HR V+ L +G D LA ET+P +
Sbjct: 132 --AASVGSYGAYLADGSEYSGDYGDAITVETLKDFHRRRVQILADSGADLLAFETVPNKL 189
Query: 179 EALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVN 234
EA A +LL E + AW SF+ KD + G+ + S SC +++ A+G+N
Sbjct: 190 EAEAYAQLLEEEDIKIPAWFSFNSKDGVNVVSGDSLMECGSIAESC-----NKVVAVGIN 244
Query: 235 CVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
C P + L+ +K+ T ++YPN G
Sbjct: 245 CTPPRFIHGLIVLLKKV-TTKPIVIYPNSG 273
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 159/327 (48%), Gaps = 39/327 (11%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G ++DG +++ RH D PLWS+ L + P + H D++ + +
Sbjct: 14 GTAVIDGGLATELERHGADLND--PLWSAKCLFSFPHLIRQVHLDYLENGADIIITASYQ 71
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVE-------------ALVRAG-VDYLALIK 369
T+ G + G Y D +EA L R +VE A R+G D I
Sbjct: 72 ATI--QGFKAKG-YSDEESEALL----RSSVEIAREAREVYYKNCAGCRSGDGDDDGRIL 124
Query: 370 PSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 429
AAS+G YG L DGSEYSG Y D++T L +HR V+ L +G D LA ET
Sbjct: 125 KQRPILVAASVGSYGAYLADGSEYSGDYGDAITVETLKDFHRRRVQILADSGADLLAFET 184
Query: 430 IPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQ 485
+P + EA A +LL E + AW SF+ KD + G+ + S SC +++
Sbjct: 185 VPNKLEAEAYAQLLEEEDIKIPAWFSFNSKDGVNVVSGDSLMECGSIAESC-----NKVV 239
Query: 486 AIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLD----TEDEYSILH 541
A+G+NC P + L+ +K+ T ++YPN G +D+ +W+ T++++ +
Sbjct: 240 AVGINCTPPRFIHGLIVLLKKV-TTKPIVIYPNSGETYDADLKEWVQNTGVTDEDF--IS 296
Query: 542 YVPQWLEEGVNIIGGCCEVTSYEIQQM 568
YV +W E G +++GGCC T I+++
Sbjct: 297 YVNKWCELGASLVGGCCRTTPDTIRKI 323
>gi|29828653|ref|NP_823287.1| homocysteine methyltransferase [Streptomyces avermitilis MA-4680]
gi|29605757|dbj|BAC69822.1| putative homocysteine S-methyltransferase [Streptomyces avermitilis
MA-4680]
Length = 313
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/260 (37%), Positives = 133/260 (51%), Gaps = 27/260 (10%)
Query: 9 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG ++Q+ + H + D LWS+ L PEA E H + AGAD+ +S YQA
Sbjct: 17 VLDGGLSNQLESAGHDLSD----ELWSARLLAERPEAITEAHLAYFEAGADVAITSSYQA 72
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ K G E+ A +LL SV L A + + +T + AAS+GP
Sbjct: 73 TFEGFAKRGIPEERAAELLGLSVGLAREAAVR----------ARADGVTRPLWVAASVGP 122
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L DGSEY G Y +T A+L A+HRP +E L AG D LALET+P EA AL++
Sbjct: 123 YGAMLADGSEYRGRY--GLTVAELEAFHRPRLEVLAAAGPDVLALETVPDADEAEALLRA 180
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R G AWLS+S D T G+ + A A+ ++ A+GVNC P V V
Sbjct: 181 VRGL-GVPAWLSYSVSGD-RTRAGQSLEEAFAPAAEAD--EVIAVGVNCCAPEDVDGAVE 236
Query: 247 CIKQ--SHPTVQTIVYPNKG 264
+ P V VYPN G
Sbjct: 237 TAARVTGKPVV---VYPNSG 253
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 142/317 (44%), Gaps = 37/317 (11%)
Query: 267 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+LDG ++Q+ + H + D LWS+ L PEA E H + + A +
Sbjct: 17 VLDGGLSNQLESAGHDLSD----ELWSARLLAERPEAITEAHLAYFEAGADVAITSSYQA 72
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT-----AAS 379
T ++ + A+L+ + G+ A ++ T AAS
Sbjct: 73 TF----EGFAKRGIPEERAAELLG---------LSVGLAREAAVRARADGVTRPLWVAAS 119
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
+GPYG +L DGSEY G Y +T A+L A+HRP +E L AG D LALET+P EA AL
Sbjct: 120 VGPYGAMLADGSEYRGRY--GLTVAELEAFHRPRLEVLAAAGPDVLALETVPDADEAEAL 177
Query: 440 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
++ +R G AWLS+S D T G+ + A A+ ++ A+GVNC P V
Sbjct: 178 LRAVRGL-GVPAWLSYSVSGD-RTRAGQSLEEAFAPAAEAD--EVIAVGVNCCAPEDVDG 233
Query: 500 LVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
V + P V VYPN G WD+ W + V W G +IGGC
Sbjct: 234 AVETAARVTGKPVV---VYPNSGETWDAGARAW--SGRSTFTAEQVTGWRRAGARLIGGC 288
Query: 558 CEVTSYEIQQMRIMIDE 574
C V I + + E
Sbjct: 289 CRVGPAAITSIAGTLGE 305
>gi|348026632|ref|YP_004766437.1| homocysteine S-methyltransferase [Megasphaera elsdenii DSM 20460]
gi|341822686|emb|CCC73610.1| homocysteine S-methyltransferase [Megasphaera elsdenii DSM 20460]
Length = 316
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 135/258 (52%), Gaps = 13/258 (5%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ +LDGS + + + D++ + LW++ L PE E H + RAGAD + YQA
Sbjct: 14 ILVLDGSMGTALE-NLGADLN-NKLWTARVLADRPELVKEVHIQYFRAGADAGITCSYQA 71
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
++ L + GYS ++A L+ ++VQ+ A+ + +++ L AS GP
Sbjct: 72 SLPGLMETGYSREQAEALITRAVQVFLDARQEWWDAEGKQAGRSWPLCL------ASAGP 125
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY GHY ++ L +HR E L +AG D L ET P+ EA ++
Sbjct: 126 YGAYLADGSEYKGHY--GVSADTLRDFHRRRAELLWQAGADVLLFETEPSLMEAEVEAQI 183
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
E G W+SFSC D H G+L++ L N +QAIGVNC +P ++++L+
Sbjct: 184 AEEL-GAPYWISFSCCDGRHNCEGQLLADCARQ-LARNYPHLQAIGVNCTKPEYIASLIG 241
Query: 247 CIKQSHPTVQTIVYPNKG 264
+K + + IVYPN G
Sbjct: 242 ELKGA-SDLPIIVYPNSG 258
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 140/321 (43%), Gaps = 33/321 (10%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
+ +G+ +LDGS + + + D++ + LW++ L PE E H + R +
Sbjct: 8 ILDREGILVLDGSMGTALE-NLGADLN-NKLWTARVLADRPELVKEVHIQYFRAGADAGI 65
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKP----SISS 374
+ Y S+ + R EAL+ V + +
Sbjct: 66 TC---------------SYQASLPGLMETGYSREQAEALITRAVQVFLDARQEWWDAEGK 110
Query: 375 QTA-------ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
Q AS GPYG L DGSEY GHY ++ L +HR E L +AG D L
Sbjct: 111 QAGRSWPLCLASAGPYGAYLADGSEYKGHY--GVSADTLRDFHRRRAELLWQAGADVLLF 168
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET P+ EA ++ E G W+SFSC D H G+L++ L N +QAI
Sbjct: 169 ETEPSLMEAEVEAQIAEEL-GAPYWISFSCCDGRHNCEGQLLADCARQ-LARNYPHLQAI 226
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWL 547
GVNC +P ++++L+ +K + + IVYPN G +D W + Y ++
Sbjct: 227 GVNCTKPEYIASLIGELKGA-SDLPIIVYPNSGEEYDPQTKTWHGVGTDRRFGDYALDYM 285
Query: 548 EEGVNIIGGCCEVTSYEIQQM 568
+ G +GGCC + I+Q+
Sbjct: 286 KAGAVAVGGCCTTVADHIRQV 306
>gi|297191400|ref|ZP_06908798.1| homocysteine methyltransferase [Streptomyces pristinaespiralis ATCC
25486]
gi|197722332|gb|EDY66240.1| homocysteine methyltransferase [Streptomyces pristinaespiralis ATCC
25486]
Length = 300
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 132/263 (50%), Gaps = 30/263 (11%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ +LDG ++Q+ D+ G LWS+ L +PE H ++RAGA ++ +S YQA
Sbjct: 15 IVVLDGGLSNQLQAQGC-DLSGG-LWSARLLADDPEQIRAAHTAYVRAGAQVLITSSYQA 72
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH-IETAASIG 125
+ + G +A LL +SV L SA D GH + AAS+G
Sbjct: 73 TFEGFARRGTGRAQAAGLLGRSVGLARSAADA----------------AGHEVWVAASVG 116
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG +L DGSEY G Y + E L +HRP +EAL AG D LALET+P EA AL++
Sbjct: 117 PYGAMLADGSEYRGRYGLGVRE--LERFHRPRIEALAAAGPDVLALETVPDTDEAQALLE 174
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
E G WLS++ + T G+ ++ A L A D++ A+GVNC P + V
Sbjct: 175 AA-EGCGVPLWLSYTVAEG-RTRAGQPLAEAFA--LAAGRDEVIAVGVNCCDPREATAAV 230
Query: 246 RCIKQ--SHPTVQTIVYPNKGVK 266
+ P V VYPN G +
Sbjct: 231 ALATEITGKPAV---VYPNSGER 250
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 142/320 (44%), Gaps = 42/320 (13%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
+G+ +LDG ++Q+ D+ G LWS+ L +PE H ++R +
Sbjct: 12 EEGIVVLDGGLSNQLQAQGC-DLSGG-LWSARLLADDPEQIRAAHTAYVRAGAQV----- 64
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGV--DYLALIKPSISSQ---- 375
+ S +A + R AG+ + L + + +
Sbjct: 65 ---------------LITSSYQATFEGFARRGTGRAQAAGLLGRSVGLARSAADAAGHEV 109
Query: 376 -TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 434
AAS+GPYG +L DGSEY G Y + E L +HRP +EAL AG D LALET+P
Sbjct: 110 WVAASVGPYGAMLADGSEYRGRYGLGVRE--LERFHRPRIEALAAAGPDVLALETVPDTD 167
Query: 435 EALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
EA AL++ E G WLS++ + T G+ ++ A L A D++ A+GVNC P
Sbjct: 168 EAQALLEAA-EGCGVPLWLSYTVAEG-RTRAGQPLAEAFA--LAAGRDEVIAVGVNCCDP 223
Query: 495 SHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552
+ V + P V VYPN G WD+ W + V +W G
Sbjct: 224 REATAAVALATEITGKPAV---VYPNSGERWDAASSSWQGGSGYDPV--RVREWRAAGAR 278
Query: 553 IIGGCCEVTSYEIQQMRIMI 572
+ GGCC V EI ++ ++
Sbjct: 279 LAGGCCRVGPREIAELARLL 298
>gi|290562601|gb|ADD38696.1| Homocysteine S-methyltransferase 4 [Lepeophtheirus salmonis]
Length = 392
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 165/349 (47%), Gaps = 53/349 (15%)
Query: 252 HPTVQTIVYPNKGVKLLDGSFTSQVSRH-TIKDVDGHPLWSSVYLTTEPEACVETHRDFI 310
+P ++ +LDG F++Q H + + G W+S + PEA VETH+DF+
Sbjct: 6 YPIFPRVLGKRDEFFVLDGGFSTQCVSHVSAESFTGRAHWTSELIDENPEAVVETHKDFL 65
Query: 311 RGHIETAASIGPYGTV-LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-AGVDYLALI 368
+G+V L + Y H +L A+ R AG+
Sbjct: 66 -----------SHGSVDLISTNTYQAHCGTIEKAVELADQAIFETHAIPRKAGI------ 108
Query: 369 KPSISSQTAASIGPYGTVLRDGSEYSGHYVDS--MTEADLIAWHRPNVEALVRAGVDYLA 426
S+GPY L GSEY+G S ++E +L WH+ + ++ GVD +A
Sbjct: 109 --------VGSLGPYAAFLASGSEYNGDKSTSYPLSEEELKTWHKERIRHMMIGGVDVIA 160
Query: 427 LETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP----D 482
ETIP+ KEA+ ++ L+ K W+SF CKD ++G+ AV S L+ +P
Sbjct: 161 FETIPSIKEAILILDLIDNTLNAKCWISFQCKDSKSLAYGDSYKEAVRS-LMCHPAYAKR 219
Query: 483 QIQAIGVNCVRPSHVSTLVRCI-----KQSHP------TVQTIVYPNKGGVWDSVHMKWL 531
++ +IG+NC P ++S L++ K + P + +VYPN+ GV+ ++
Sbjct: 220 KLLSIGINCTSPKYISPLLKLAEEVNNKSNFPDMYGYWRIPYVVYPNR-GVYCKKKTCYI 278
Query: 532 DTEDEY------SILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDE 574
+ +D+ +IL + +W+ G IIGGCC V + IQ+++ I E
Sbjct: 279 EDKDDILGGGDNAILKRIHEWMSLGARIIGGCCGVNAQLIQKIKDQISE 327
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 137/276 (49%), Gaps = 46/276 (16%)
Query: 9 LLDGSFTSQVSRH-TIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGA-DIIQSSCYQA 66
+LDG F++Q H + + G W+S + PEA VETH+DF+ G+ D+I ++ YQA
Sbjct: 21 VLDGGFSTQCVSHVSAESFTGRAHWTSELIDENPEAVVETHKDFLSHGSVDLISTNTYQA 80
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + K+V+L + A + + P S+GP
Sbjct: 81 HCGTI--------------EKAVELADQAIFETHAIPR------------KAGIVGSLGP 114
Query: 127 YGTVLRDGSEYSGHYVDS--MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
Y L GSEY+G S ++E +L WH+ + ++ GVD +A ETIP+ KEA+ ++
Sbjct: 115 YAAFLASGSEYNGDKSTSYPLSEEELKTWHKERIRHMMIGGVDVIAFETIPSIKEAILIL 174
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP----DQIQAIGVNCVRPSH 240
L+ K W+SF CKD ++G+ AV S L+ +P ++ +IG+NC P +
Sbjct: 175 DLIDNTLNAKCWISFQCKDSKSLAYGDSYKEAVRS-LMCHPAYAKRKLLSIGINCTSPKY 233
Query: 241 VSTLVRCI-----KQSHP------TVQTIVYPNKGV 265
+S L++ K + P + +VYPN+GV
Sbjct: 234 ISPLLKLAEEVNNKSNFPDMYGYWRIPYVVYPNRGV 269
>gi|42572773|ref|NP_974482.1| homocysteine S-methyltransferase 2 [Arabidopsis thaliana]
gi|332646934|gb|AEE80455.1| homocysteine S-methyltransferase 2 [Arabidopsis thaliana]
Length = 293
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 126/241 (52%), Gaps = 20/241 (8%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQ 90
L S +Y E + H D++ AGADII S+ YQA + G+S +E+ LL KSV+
Sbjct: 6 LLSCLYFLME-----QVHLDYLEAGADIISSASYQATIQGFEAKGFSREESESLLKKSVE 60
Query: 91 LMNSAKDKENQTPDINLNKTFNLLTGH-IETAASIGPYGTVLRDGSEYSGHYVDSMTEAD 149
+ A++ + + +L I AAS+G YG L DGSEYSG Y DS+T
Sbjct: 61 IATEARNSYYDKCGTSSSMDDKILKKRPILVAASVGSYGAYLADGSEYSGIYGDSITLEK 120
Query: 150 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE----FPGQKAWLSFSCKDDT 205
L +HR ++ L +G D +A ETIP + EA A LL E PG W SF+ KD
Sbjct: 121 LKDFHRRRLQVLAESGADLIAFETIPNKIEAQAFADLLEEGDVKIPG---WFSFNSKDGV 177
Query: 206 HTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNK 263
+ G+ I ++ + N +++ A+G+NC P + LV I++ S P +VYPN
Sbjct: 178 NVVSGDSIKECIS--IAENCEKVVAVGINCTPPRFIEGLVLEIEKVTSKP---ILVYPNS 232
Query: 264 G 264
G
Sbjct: 233 G 233
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 112/201 (55%), Gaps = 18/201 (8%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
AAS+G YG L DGSEYSG Y DS+T L +HR ++ L +G D +A ETIP + EA
Sbjct: 92 AASVGSYGAYLADGSEYSGIYGDSITLEKLKDFHRRRLQVLAESGADLIAFETIPNKIEA 151
Query: 437 LALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 492
A LL E PG W SF+ KD + G+ I ++ + N +++ A+G+NC
Sbjct: 152 QAFADLLEEGDVKIPG---WFSFNSKDGVNVVSGDSIKECIS--IAENCEKVVAVGINCT 206
Query: 493 RPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTE---DEYSILHYVPQWL 547
P + LV I++ S P +VYPN G +D+ +W++ DE + YV +W+
Sbjct: 207 PPRFIEGLVLEIEKVTSKP---ILVYPNSGESYDADRKEWVENTGVGDE-DFVSYVEKWM 262
Query: 548 EEGVNIIGGCCEVTSYEIQQM 568
+ GV+++GGCC T I+ +
Sbjct: 263 DAGVSLLGGCCRTTPTTIRAI 283
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 314 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL--IKPS 371
I AAS+G YG L DGSEYSG Y DS+T L +HR ++ L +G D +A I
Sbjct: 89 ILVAASVGSYGAYLADGSEYSGIYGDSITLEKLKDFHRRRLQVLAESGADLIAFETIPNK 148
Query: 372 ISSQTAASIGPYGTV 386
I +Q A + G V
Sbjct: 149 IEAQAFADLLEEGDV 163
>gi|414877962|tpg|DAA55093.1| TPA: hypothetical protein ZEAMMB73_526479 [Zea mays]
Length = 295
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 140/267 (52%), Gaps = 30/267 (11%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +++ + D PLWS+ L + P + H D++ AGA+II ++ YQA +
Sbjct: 25 VLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATI 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK------ENQTPDINLNKTFNLLTGHIETAA 122
G+S++++ +LL KSVQ+ A++ E TP + I AA
Sbjct: 83 QGFESKGFSKEQSENLLTKSVQIALEAREMFLKEHLEKSTP----------IQHPILVAA 132
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
++G YG L DGSEYSG Y ++ T+ L +HR ++ L AG D +A ETIP + EA A
Sbjct: 133 ALGSYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQA 192
Query: 183 LVKLLRE----FPGQKAWLSFSCKDDTHTSHGE-LISSAVTSCLLANPDQIQAIGVNCVR 237
V+LL E P +WLSF+ KD H G+ LI A + A ++ A+G+NC
Sbjct: 193 YVELLEECNINIP---SWLSFNSKDGVHVVSGDSLIECATIADKCA---KVGAVGINCTP 246
Query: 238 PSHVSTLVRCIKQSHPTVQTIVYPNKG 264
P + L+ I++ ++YPN G
Sbjct: 247 PRFIHGLILSIRKVTDK-PILIYPNSG 272
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 132/277 (47%), Gaps = 24/277 (8%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G +LDG +++ + D PLWS+ L + P + H D++ +
Sbjct: 22 GRLVLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQ 79
Query: 324 GTVLRDGSEYSGHYVDS----MTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAAS 379
T+ G E G + +T++ IA E ++ ++ I+ I AA+
Sbjct: 80 ATI--QGFESKGFSKEQSENLLTKSVQIALEAR--EMFLKEHLEKSTPIQHPI--LVAAA 133
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
+G YG L DGSEYSG Y ++ T+ L +HR ++ L AG D +A ETIP + EA A
Sbjct: 134 LGSYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQAY 193
Query: 440 VKLLRE----FPGQKAWLSFSCKDDTHTSHGE-LISSAVTSCLLANPDQIQAIGVNCVRP 494
V+LL E P +WLSF+ KD H G+ LI A + A ++ A+G+NC P
Sbjct: 194 VELLEECNINIP---SWLSFNSKDGVHVVSGDSLIECATIADKCA---KVGAVGINCTPP 247
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWL 531
+ L+ I++ ++YPN G +D +W+
Sbjct: 248 RFIHGLILSIRKVTDK-PILIYPNSGERYDGEKKEWV 283
>gi|227810129|ref|ZP_03989042.1| homocysteine methyltransferase [Acidaminococcus sp. D21]
gi|352684792|ref|YP_004896777.1| homocysteine methyltransferase [Acidaminococcus intestini RyC-MR95]
gi|226904709|gb|EEH90627.1| homocysteine methyltransferase [Acidaminococcus sp. D21]
gi|350279447|gb|AEQ22637.1| homocysteine methyltransferase [Acidaminococcus intestini RyC-MR95]
Length = 320
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 151/288 (52%), Gaps = 18/288 (6%)
Query: 1 MSKICKVK---LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGAD 57
++KI + K ++DGS + + H +++ + LW++ L +PE + H D+ AGAD
Sbjct: 5 LAKILEKKQICVIDGSMGTALE-HLGANLN-NSLWTARVLLDQPELVKKVHLDYFHAGAD 62
Query: 58 IIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH 117
+ YQA + L G SE+EA DL+ +SV++ A+++ + ++ + +
Sbjct: 63 AGITCSYQATIPGLMANGLSEKEAEDLIVRSVKVFQEARNEWWEKEGKAADRAYPMCL-- 120
Query: 118 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 177
A IGPYG L DGSEY GHY + +A L +H+ E L AG D L ET P+
Sbjct: 121 ----AGIGPYGAYLADGSEYKGHY--GIPDAALHDFHQRRAELLWEAGADVLLFETQPSL 174
Query: 178 KEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 237
EA + + E G W+SFSCKD H + G+LI + P +++A+GVNC +
Sbjct: 175 GEA-KIEAAIAERLGADYWISFSCKDGLHINEGDLIRDCAAAFRSGYP-RLRALGVNCTK 232
Query: 238 PSHVSTLVRCIKQSHPTVQTIVYPNKGVKL--LDGSFTSQVSRHTIKD 283
P ++ +L++ + + + +VYPN G + ++ + H+ KD
Sbjct: 233 PEYLESLIKELGK-ETDLPIVVYPNSGETYDPVTKTWNGKGDGHSFKD 279
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 150/322 (46%), Gaps = 21/322 (6%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
+ K + ++DGS + + H +++ + LW++ L +PE + H D+ +
Sbjct: 8 ILEKKQICVIDGSMGTALE-HLGANLN-NSLWTARVLLDQPELVKKVHLDYFHAGADAGI 65
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA- 377
+ T+ G + ++E + +V+ A ++ K ++ A
Sbjct: 66 TCSYQATI-------PGLMANGLSEKEAEDLIVRSVKVFQEARNEWWE--KEGKAADRAY 116
Query: 378 ----ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
A IGPYG L DGSEY GHY + +A L +H+ E L AG D L ET P+
Sbjct: 117 PMCLAGIGPYGAYLADGSEYKGHY--GIPDAALHDFHQRRAELLWEAGADVLLFETQPSL 174
Query: 434 KEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
EA + + E G W+SFSCKD H + G+LI + P +++A+GVNC +
Sbjct: 175 GEA-KIEAAIAERLGADYWISFSCKDGLHINEGDLIRDCAAAFRSGYP-RLRALGVNCTK 232
Query: 494 PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNI 553
P ++ +L++ + + + +VYPN G +D V W D +S Y ++E G
Sbjct: 233 PEYLESLIKELGK-ETDLPIVVYPNSGETYDPVTKTWNGKGDGHSFKDYARTYMEAGARA 291
Query: 554 IGGCCEVTSYEIQQMRIMIDEF 575
+GGCC S I + +EF
Sbjct: 292 VGGCCTTVSEHIVAVAKAREEF 313
>gi|375095873|ref|ZP_09742138.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Saccharomonospora marina
XMU15]
gi|374656606|gb|EHR51439.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Saccharomonospora marina
XMU15]
Length = 315
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 128/259 (49%), Gaps = 28/259 (10%)
Query: 9 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG +++ H + D LWS+ L PE V HR F RAGA++ ++ YQA
Sbjct: 29 VLDGGVATELEARGHDLSDA----LWSARLLADAPEEVVSAHRAFFRAGANVATTASYQA 84
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK-ENQTPDINLNKTFNLLTGHIETAASIG 125
+ G +A LL +SV+L A+D+ + P AAS+G
Sbjct: 85 SFTGFAARGIGPGQAAALLRRSVELAKRARDQVSDDVPRW--------------VAASVG 130
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG VL DGSEY G Y ++ L A+HRP ++ L A D LALET+P +EA AL+
Sbjct: 131 PYGAVLADGSEYRGRY--GVSRQKLAAFHRPRLDVLAEAEPDLLALETVPDVEEAEALLD 188
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
L E G AWLS++ D T G+ + A + + PD I A+GVNC P V+ V
Sbjct: 189 AL-ESVGMPAWLSYTV-DGGRTRAGQPLEEAF-AVVAGRPD-IVAVGVNCCAPEEVADAV 244
Query: 246 RCIKQSHPTVQTIVYPNKG 264
I + YPN G
Sbjct: 245 -AIAGETTGKPVLAYPNSG 262
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 137/308 (44%), Gaps = 34/308 (11%)
Query: 267 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+LDG +++ H + D LWS+ L PE V HR F R A
Sbjct: 29 VLDGGVATELEARGHDLSDA----LWSARLLADAPEEVVSAHRAFFRAGANVA------- 77
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
T + ++G + A R +VE RA + + AAS+GPYG
Sbjct: 78 TTASYQASFTGFAARGIGPGQAAALLRRSVELAKRA----RDQVSDDVPRWVAASVGPYG 133
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
VL DGSEY G Y ++ L A+HRP ++ L A D LALET+P +EA AL+ L
Sbjct: 134 AVLADGSEYRGRY--GVSRQKLAAFHRPRLDVLAEAEPDLLALETVPDVEEAEALLDAL- 190
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 504
E G AWLS++ D T G+ + A + + PD I A+GVNC P V+ V I
Sbjct: 191 ESVGMPAWLSYTV-DGGRTRAGQPLEEAF-AVVAGRPD-IVAVGVNCCAPEEVADAV-AI 246
Query: 505 KQSHPTVQTIVYPNKGGVWDSVHMKWLDTE----DEYSILHYVPQWLEEGVNIIGGCCEV 560
+ YPN G WD +W T DE + W GV +GGCC V
Sbjct: 247 AGETTGKPVLAYPNSGQGWDPEVGRWTGTSRFRADEAA------SWYARGVTAVGGCCRV 300
Query: 561 TSYEIQQM 568
+I +
Sbjct: 301 PPADIAAL 308
>gi|414877960|tpg|DAA55091.1| TPA: hypothetical protein ZEAMMB73_526479 [Zea mays]
Length = 302
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 139/264 (52%), Gaps = 24/264 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +++ + D PLWS+ L + P + H D++ AGA+II ++ YQA +
Sbjct: 25 VLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATI 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK------ENQTPDINLNKTFNLLTGHIETAA 122
G+S++++ +LL KSVQ+ A++ E TP + I AA
Sbjct: 83 QGFESKGFSKEQSENLLTKSVQIALEAREMFLKEHLEKSTP----------IQHPILVAA 132
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
++G YG L DGSEYSG Y ++ T+ L +HR ++ L AG D +A ETIP + EA A
Sbjct: 133 ALGSYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQA 192
Query: 183 LVKLLREFP-GQKAWLSFSCKDDTHTSHGE-LISSAVTSCLLANPDQIQAIGVNCVRPSH 240
V+LL E +WLSF+ KD H G+ LI A + A ++ A+G+NC P
Sbjct: 193 YVELLEECNINIPSWLSFNSKDGVHVVSGDSLIECATIADKCA---KVGAVGINCTPPRF 249
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKG 264
+ L+ I++ ++YPN G
Sbjct: 250 IHGLILSIRKVTDK-PILIYPNSG 272
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 18/274 (6%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G +LDG +++ + D PLWS+ L + P + H D++ +
Sbjct: 22 GRLVLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQ 79
Query: 324 GTVLRDGSEYSGHYVDS----MTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAAS 379
T+ G E G + +T++ IA E ++ ++ I+ I AA+
Sbjct: 80 ATI--QGFESKGFSKEQSENLLTKSVQIALEAR--EMFLKEHLEKSTPIQHPI--LVAAA 133
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
+G YG L DGSEYSG Y ++ T+ L +HR ++ L AG D +A ETIP + EA A
Sbjct: 134 LGSYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQAY 193
Query: 440 VKLLREFP-GQKAWLSFSCKDDTHTSHGE-LISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
V+LL E +WLSF+ KD H G+ LI A + A ++ A+G+NC P +
Sbjct: 194 VELLEECNINIPSWLSFNSKDGVHVVSGDSLIECATIADKCA---KVGAVGINCTPPRFI 250
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWL 531
L+ I++ ++YPN G +D +W+
Sbjct: 251 HGLILSIRKVTDK-PILIYPNSGERYDGEKKEWV 283
>gi|333919400|ref|YP_004492981.1| homocysteine methyltransferase [Amycolicicoccus subflavus DQS3-9A1]
gi|333481621|gb|AEF40181.1| homocysteine methyltransferase [Amycolicicoccus subflavus DQS3-9A1]
Length = 297
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 127/281 (45%), Gaps = 26/281 (9%)
Query: 289 LWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA 348
LWS+ L P+ HR F + A + Y S
Sbjct: 34 LWSARLLLDTPDEIAAVHRAFFAAGADIA---------------ITASYQASFRGFANCG 78
Query: 349 WHRPNVEALVRAGVDYLALIKPSISSQ-TAASIGPYGTVLRDGSEYSGHYVDSMTEADLI 407
R E L+R V A ++ AASIGPYG DGSEY G Y S+ E L
Sbjct: 79 IGRRGTERLLRRSVRIAADVRDEFGRGFVAASIGPYGAAAADGSEYKGRYGLSVRE--LR 136
Query: 408 AWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGE 467
AWHRP E L G D LA+ETIP EA AL L+ EF AWLS++ T G+
Sbjct: 137 AWHRPRFEILADTGADVLAVETIPDLDEAEALASLISEFR-VPAWLSYTIA-GARTRAGQ 194
Query: 468 LISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVH 527
+S A + + D I A+GVNC P+ V + + S V IVYPN G WD+
Sbjct: 195 PVSDAFE--VASEIDSIVAVGVNCCAPADVIPTIDTAQHSGKPV--IVYPNSGEGWDAEA 250
Query: 528 MKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+W + E+S+ QW G IIGGCC V + +I Q+
Sbjct: 251 GRWTG-KSEFSV-KLARQWAAAGAQIIGGCCRVGAGDIAQV 289
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 113/234 (48%), Gaps = 24/234 (10%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQ 90
LWS+ L P+ HR F AGADI ++ YQA+ G + LL +SV+
Sbjct: 34 LWSARLLLDTPDEIAAVHRAFFAAGADIAITASYQASFRGFANCGIGRRGTERLLRRSVR 93
Query: 91 LMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADL 150
+ +D+ + F AASIGPYG DGSEY G Y S+ E L
Sbjct: 94 IAADVRDE--------FGRGF--------VAASIGPYGAAAADGSEYKGRYGLSVRE--L 135
Query: 151 IAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG 210
AWHRP E L G D LA+ETIP EA AL L+ EF AWLS++ T G
Sbjct: 136 RAWHRPRFEILADTGADVLAVETIPDLDEAEALASLISEFR-VPAWLSYTIA-GARTRAG 193
Query: 211 ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+ +S A + + D I A+GVNC P+ V + + S V IVYPN G
Sbjct: 194 QPVSDAFE--VASEIDSIVAVGVNCCAPADVIPTIDTAQHSGKPV--IVYPNSG 243
>gi|55820663|ref|YP_139105.1| homocysteine methyltransferase [Streptococcus thermophilus LMG
18311]
gi|55736648|gb|AAV60290.1| homocysteine S-methyltransferase (S-methylmethionine)
[Streptococcus thermophilus LMG 18311]
Length = 322
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 138/249 (55%), Gaps = 16/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
D+ G LWS+ YL + E E H ++ AGAD+I +S YQA + L + G +E+ A +
Sbjct: 36 DISGK-LWSAKYLLEKSEVIQELHETYVAAGADLITTSSYQATLPGLVEAGLTEKAAEQI 94
Query: 85 LHKSVQLMNSAKDKENQTPD--INLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV 142
+ +V+L +A+DK D + + L++G +GPY L +GSEYSG Y
Sbjct: 95 IALTVRLAKAARDKVWGALDETEKAKRPYPLISG------DVGPYAAYLANGSEYSGDY- 147
Query: 143 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-REFPGQKAWLSFSC 201
+T +L +HRP ++ L+ GVD LALETIP E AL++LL EFP +A++SF+
Sbjct: 148 GQITIKELKDFHRPRIQILLDQGVDLLALETIPNRLETQALIELLAEEFPEAEAYMSFTV 207
Query: 202 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 261
+ S G S A + L++ +QI A+G+NC P + + +K + + I YP
Sbjct: 208 QIPDAISDG--TSLAEMAKLVSQSNQILAVGINCSSPLLYNQALAFLKNAGKAL--ITYP 263
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 264 NSG-EVYDG 271
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 145/308 (47%), Gaps = 34/308 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMT 342
D+ G LWS+ YL + E E H ++ G L S Y + +
Sbjct: 36 DISGK-LWSAKYLLEKSEVIQELHETYVAA-----------GADLITTSSYQAT-LPGLV 82
Query: 343 EADLIAWHRPNVEAL----VRAGVDYL--ALIKPSISSQ----TAASIGPYGTVLRDGSE 392
EA L + AL +A D + AL + + + + +GPY L +GSE
Sbjct: 83 EAGLTEKAAEQIIALTVRLAKAARDKVWGALDETEKAKRPYPLISGDVGPYAAYLANGSE 142
Query: 393 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-REFPGQKA 451
YSG Y +T +L +HRP ++ L+ GVD LALETIP E AL++LL EFP +A
Sbjct: 143 YSGDY-GQITIKELKDFHRPRIQILLDQGVDLLALETIPNRLETQALIELLAEEFPEAEA 201
Query: 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTV 511
++SF+ + S G S A + L++ +QI A+G+NC P + + +K + +
Sbjct: 202 YMSFTVQIPDAISDG--TSLAEMAKLVSQSNQILAVGINCSSPLLYNQALAFLKNAGKAL 259
Query: 512 QTIVYPNKGGVWDSVHMKWLDTE-DEYSILHYVPQW-LEEGVNIIGGCCEVTSYEIQQMR 569
I YPN G V+D W + D +++ + W GV I+GGCC +I +
Sbjct: 260 --ITYPNSGEVYDGDSQTWKPKDKDALTLVEHSKYWHAHFGVKILGGCCRTRPNDI---K 314
Query: 570 IMIDEFNT 577
+ EF T
Sbjct: 315 ALYQEFRT 322
>gi|254821426|ref|ZP_05226427.1| homocysteine methyltransferase [Mycobacterium intracellulare ATCC
13950]
Length = 308
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 127/260 (48%), Gaps = 28/260 (10%)
Query: 9 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
LLDG +++ H + D LWS+ L P V H + RAGA I ++ YQA
Sbjct: 15 LLDGGLATELEARGHDLSDR----LWSARLLADAPREIVAVHAAYFRAGATIATTASYQA 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G +E LL +SV+L +A+D+ + AAS+GP
Sbjct: 71 SFEGFAARGLDRRETDLLLRRSVELAKAARDEAGAA--------------GLLVAASVGP 116
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y ++ L WHRP +E L AG D LA ET+P EA ALV +
Sbjct: 117 YGAALADGSEYRGRY--GLSVGALARWHRPRLETLADAGADVLACETVPDVDEAEALVDV 174
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R G AWLS++ D T G+ ++ A + A D+I A+GVNC P V +
Sbjct: 175 VRSV-GMPAWLSYTI-DGARTRAGQPLTEAFA--VAAGVDEIVAVGVNCCAPDDVLPAIA 230
Query: 247 CIKQSHPTVQTIVYPNKGVK 266
+ V IVYPN G +
Sbjct: 231 SASEIGKPV--IVYPNSGER 248
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 142/307 (46%), Gaps = 30/307 (9%)
Query: 264 GVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
G LLDG +++ H + D LWS+ L P V H + R A+I
Sbjct: 12 GTVLLDGGLATELEARGHDLSDR----LWSARLLADAPREIVAVHAAYFR----AGATIA 63
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
+ ++ +D E DL+ R +VE L +A D + AAS+G
Sbjct: 64 TTASYQASFEGFAARGLDRR-ETDLL--LRRSVE-LAKAARDEAG----AAGLLVAASVG 115
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG L DGSEY G Y ++ L WHRP +E L AG D LA ET+P EA ALV
Sbjct: 116 PYGAALADGSEYRGRY--GLSVGALARWHRPRLETLADAGADVLACETVPDVDEAEALVD 173
Query: 442 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
++R G AWLS++ D T G+ ++ A + A D+I A+GVNC P V +
Sbjct: 174 VVRSV-GMPAWLSYTI-DGARTRAGQPLTEAFA--VAAGVDEIVAVGVNCCAPDDVLPAI 229
Query: 502 RCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVT 561
+ V IVYPN G WD W+ + L QW+ G I+GGCC V
Sbjct: 230 ASASEIGKPV--IVYPNSGERWDG--RAWVGPRTFATGL--AAQWVSAGARIVGGCCRVG 283
Query: 562 SYEIQQM 568
+I ++
Sbjct: 284 PVDIAEL 290
>gi|225719574|gb|ACO15633.1| Homocysteine S-methyltransferase 1 [Caligus clemensi]
Length = 391
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 157/347 (45%), Gaps = 48/347 (13%)
Query: 252 HPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKD-VDGHPLWSSVYLTTEPEACVETHRDFI 310
+P ++ + +LDG F++Q+ +H KD +G P W+S T PEA +H D++
Sbjct: 6 YPVYPRVLGSRNEIFILDGGFSTQIQQHAGKDSFEGRPQWTSELNTENPEAVKRSHMDYL 65
Query: 311 RGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKP 370
S Y + S V+ EA L A H P +AG+
Sbjct: 66 SNCSGDLISSNTY----QAASSSIEKAVELCDEAILEASHVPR-----KAGI-------- 108
Query: 371 SISSQTAASIGPYGTVLRDGSEYS---GHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
S+GPY GSEY+ G + + +L W++ + L+ AGVD +A
Sbjct: 109 ------VGSLGPYAAFQPSGSEYNSSDGMSYPPLADEELKEWYKDRIRHLMIAGVDVIAF 162
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQA- 486
ET+P KEAL + ++ K W+SF C+D H ++GE AV LL +P ++
Sbjct: 163 ETMPCIKEALVALDIIDNVINAKCWISFQCRDGKHLAYGESFKDAVER-LLNHPAFVKRK 221
Query: 487 ---IGVNCVRPSHVSTLVRCI-----------KQSHPTVQTIVYPNKGGVWDSVHMKWLD 532
IG+NC P ++S+L++ K + + +VYPN+G LD
Sbjct: 222 LLYIGINCTSPKYISSLLKLAERVNKKMNFPDKYGYWRIPYVVYPNRGVYCKEKCCYVLD 281
Query: 533 TED-----EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDE 574
+D + IL +W+ G +IGGCC V + I+++R + E
Sbjct: 282 KDDPLGGGDEGILKRCHEWMLLGTRVIGGCCGVDANLIKEIRNQVSE 328
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 133/280 (47%), Gaps = 47/280 (16%)
Query: 6 KVKLLDGSFTSQVSRHTIKD-VDGHPLWSSVYLTTEPEACVETHRDFI-RAGADIIQSSC 63
++ +LDG F++Q+ +H KD +G P W+S T PEA +H D++ D+I S+
Sbjct: 18 EIFILDGGFSTQIQQHAGKDSFEGRPQWTSELNTENPEAVKRSHMDYLSNCSGDLISSNT 77
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
YQA A + K+V+L + A + + P S
Sbjct: 78 YQA--------------ASSSIEKAVELCDEAILEASHVPR------------KAGIVGS 111
Query: 124 IGPYGTVLRDGSEYS---GHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 180
+GPY GSEY+ G + + +L W++ + L+ AGVD +A ET+P KEA
Sbjct: 112 LGPYAAFQPSGSEYNSSDGMSYPPLADEELKEWYKDRIRHLMIAGVDVIAFETMPCIKEA 171
Query: 181 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQA----IGVNCV 236
L + ++ K W+SF C+D H ++GE AV LL +P ++ IG+NC
Sbjct: 172 LVALDIIDNVINAKCWISFQCRDGKHLAYGESFKDAVER-LLNHPAFVKRKLLYIGINCT 230
Query: 237 RPSHVSTLVRCI-----------KQSHPTVQTIVYPNKGV 265
P ++S+L++ K + + +VYPN+GV
Sbjct: 231 SPKYISSLLKLAERVNKKMNFPDKYGYWRIPYVVYPNRGV 270
>gi|116627472|ref|YP_820091.1| homocysteine methyltransferase [Streptococcus thermophilus LMD-9]
gi|386086277|ref|YP_006002151.1| Homocysteine S-methyltransferase (S-methylmethionine)
[Streptococcus thermophilus ND03]
gi|386344276|ref|YP_006040440.1| homocysteine S-methyltransferase (S-methylmethionine)
[Streptococcus thermophilus JIM 8232]
gi|387909369|ref|YP_006339675.1| homocysteine methyltransferase [Streptococcus thermophilus
MN-ZLW-002]
gi|116100749|gb|ABJ65895.1| Homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Streptococcus
thermophilus LMD-9]
gi|312277990|gb|ADQ62647.1| Homocysteine S-methyltransferase (S-methylmethionine)
[Streptococcus thermophilus ND03]
gi|339277737|emb|CCC19485.1| homocysteine S-methyltransferase (S-methylmethionine)
[Streptococcus thermophilus JIM 8232]
gi|387574304|gb|AFJ83010.1| homocysteine methyltransferase [Streptococcus thermophilus
MN-ZLW-002]
Length = 316
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 138/249 (55%), Gaps = 16/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
D+ G LWS+ YL + E E H ++ AGAD+I +S YQA + L + G +E+ A +
Sbjct: 30 DISGK-LWSAKYLLEKSEVIQELHETYVAAGADLITTSSYQATLPGLVEAGLTEKAAEQI 88
Query: 85 LHKSVQLMNSAKDKENQTPD--INLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV 142
+ +V+L +A+DK D + + L++G +GPY L +GSEYSG Y
Sbjct: 89 IALTVRLAKAARDKVWGALDETEKAKRPYPLISG------DVGPYAAYLANGSEYSGDY- 141
Query: 143 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-REFPGQKAWLSFSC 201
+T +L +HRP ++ L+ GVD LALETIP E AL++LL EFP +A++SF+
Sbjct: 142 GQITIKELKDFHRPRIQILLDQGVDLLALETIPNRLETQALIELLAEEFPEAEAYMSFTV 201
Query: 202 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 261
+ S G S A + L++ +QI A+G+NC P + + +K + + I YP
Sbjct: 202 QIPDAISDG--TSLAEMAKLVSQSNQILAVGINCSSPLLYNQALAFLKNAGKAL--ITYP 257
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 258 NSG-EVYDG 265
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 154/329 (46%), Gaps = 35/329 (10%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
N + +L G+ +++ D+ G LWS+ YL + E E H ++
Sbjct: 10 NNSLLILHGALGTEMEALGY-DISGK-LWSAKYLLEKSEVIQELHETYVAA--------- 58
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL----VRAGVDYL--ALIKPSISSQ 375
G L S Y + + EA L + AL +A D + AL + + +
Sbjct: 59 --GADLITTSSYQAT-LPGLVEAGLTEKAAEQIIALTVRLAKAARDKVWGALDETEKAKR 115
Query: 376 ----TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
+ +GPY L +GSEYSG Y +T +L +HRP ++ L+ GVD LALETIP
Sbjct: 116 PYPLISGDVGPYAAYLANGSEYSGDY-GQITIKELKDFHRPRIQILLDQGVDLLALETIP 174
Query: 432 AEKEALALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490
E AL++LL EFP +A++SF+ + S G S A + L++ +QI A+G+N
Sbjct: 175 NRLETQALIELLAEEFPEAEAYMSFTVQIPDAISDG--TSLAEMAKLVSQSNQILAVGIN 232
Query: 491 CVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQW-LE 548
C P + + +K + + I YPN G V+D W +D +++ + W
Sbjct: 233 CSSPLLYNQALAFLKNAGKAL--ITYPNSGEVYDGDSQTWKPKDKDALTLVEHSKYWHAH 290
Query: 549 EGVNIIGGCCEVTSYEIQQMRIMIDEFNT 577
GV I+GGCC +I + + EF T
Sbjct: 291 FGVKILGGCCRTRPNDI---KALYQEFRT 316
>gi|161507552|ref|YP_001577506.1| homocysteine methyltransferase [Lactobacillus helveticus DPC 4571]
gi|160348541|gb|ABX27215.1| Homocysteine S-methyltransferase [Lactobacillus helveticus DPC
4571]
Length = 331
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 143/269 (53%), Gaps = 27/269 (10%)
Query: 1 MSKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQ 60
+S+ K +LDG+ + ++ R +K + LW++ L E + + H D+ AGA+++
Sbjct: 35 ISRAKKGIVLDGAMSDELERQGVKT--NNKLWTATALINELDKIYQAHWDYFTAGAELVI 92
Query: 61 SSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG-HIE 119
+ YQANV T+ GYSEQEA + +V++ A+D Q TG H
Sbjct: 93 TDTYQANVQAFTQAGYSEQEAEKFIRDAVKVAKKARDDYEQK------------TGKHNY 140
Query: 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 179
A ++G Y L DG+EY G Y ++E + +A+H P + ++ D +ALET P E
Sbjct: 141 VAGTVGSYSAYLADGNEYRGDY--ELSELEYLAFHLPRLRQILAEKPDLIALETQPKLDE 198
Query: 180 ALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 235
LA++ L+E +P ++SF+ KD TH S G + AV++ + +Q+ AIG+NC
Sbjct: 199 PLAVLNWLKENASDYP---VYVSFTLKDATHISDGTTLEQAVSA--VDKFEQVFAIGINC 253
Query: 236 VRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+ P V+ ++ I + + ++YPN G
Sbjct: 254 ISPDLVAPALKEIGK-YTFKPLVLYPNLG 281
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 154/319 (48%), Gaps = 36/319 (11%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
KG+ +LDG+ + ++ R +K + LW++ L E + + H D+ E
Sbjct: 39 KKGI-VLDGAMSDELERQGVKT--NNKLWTATALINELDKIYQAHWDYFTAGAEL----- 90
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT----- 376
V+ D + + V + T+A + E +R V + +T
Sbjct: 91 ----VITDTYQAN---VQAFTQA---GYSEQEAEKFIRDAVKVAKKARDDYEQKTGKHNY 140
Query: 377 -AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
A ++G Y L DG+EY G Y ++E + +A+H P + ++ D +ALET P E
Sbjct: 141 VAGTVGSYSAYLADGNEYRGDY--ELSELEYLAFHLPRLRQILAEKPDLIALETQPKLDE 198
Query: 436 ALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 491
LA++ L+E +P ++SF+ KD TH S G + AV++ + +Q+ AIG+NC
Sbjct: 199 PLAVLNWLKENASDYP---VYVSFTLKDATHISDGTTLEQAVSA--VDKFEQVFAIGINC 253
Query: 492 VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGV 551
+ P V+ ++ I + + ++YPN G +D +W + ++++ +W +EG
Sbjct: 254 ISPDLVAPALKEIGK-YTFKPLVLYPNLGASYDPKIKQWREFKEKFDFNKLTKKWYQEGA 312
Query: 552 NIIGGCCEVTSYEIQQMRI 570
+IGGCC EI+QM +
Sbjct: 313 RLIGGCCTTGPTEIKQMLV 331
>gi|452847522|gb|EME49454.1| hypothetical protein DOTSEDRAFT_68274 [Dothistroma septosporum
NZE10]
Length = 339
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 141/263 (53%), Gaps = 24/263 (9%)
Query: 9 LLDGSFTSQ--VSRHTIKDVDGHPLWSSVYLTTEP---EACVETHRDFIRAGADIIQSSC 63
+LDG+ ++ V H + HPLWS + + +P E+ H D+ RAGA+I ++
Sbjct: 18 ILDGALATELEVRGHDLN----HPLWS-MKVIQDPAGIESIKNIHLDYFRAGANIAITAS 72
Query: 64 YQANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAA 122
YQA+ L + SE EA + ++V+L +A+D Q + + ++ LL A
Sbjct: 73 YQASTQGLREHFQLSEAEAQKAVARTVELAQNARDIAYQ--EGAMPRSHPLLV-----AG 125
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
S+GPYG L DGSEY G YV S+ E +HRP ++AL AGVD A ET+P E A
Sbjct: 126 SVGPYGAYLSDGSEYRGDYVRSIQE--FRDFHRPRMQALCDAGVDLFAFETMPNMTEIKA 183
Query: 183 LVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 241
L+ LL +FP AWLS + +D H S G + V L+ +QI A G+NCV +
Sbjct: 184 LLDLLETDFPQAVAWLSCTTRDADHLSDGTTWN--VLLDLVNRHEQIVAFGINCVPMTSS 241
Query: 242 STLVRCIKQSHPTVQTIVYPNKG 264
+ +R I Q H T+ + YPN G
Sbjct: 242 TNTLRSISQ-HTTLPLVCYPNSG 263
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 147/328 (44%), Gaps = 37/328 (11%)
Query: 262 NKGVKLLDGSFTSQ--VSRHTIKDVDGHPLWSSVYLTTEP---EACVETHRDFIRG--HI 314
++G +LDG+ ++ V H + HPLWS + + +P E+ H D+ R +I
Sbjct: 13 SRGTVILDGALATELEVRGHDLN----HPLWS-MKVIQDPAGIESIKNIHLDYFRAGANI 67
Query: 315 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISS 374
AS LR+ H+ S EA + R + S
Sbjct: 68 AITASYQASTQGLRE------HFQLSEAEAQKAVARTVELAQNARDIAYQEGAMPRSHPL 121
Query: 375 QTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 434
A S+GPYG L DGSEY G YV S+ E +HRP ++AL AGVD A ET+P
Sbjct: 122 LVAGSVGPYGAYLSDGSEYRGDYVRSIQE--FRDFHRPRMQALCDAGVDLFAFETMPNMT 179
Query: 435 EALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
E AL+ LL +FP AWLS + +D H S G + V L+ +QI A G+NCV
Sbjct: 180 EIKALLDLLETDFPQAVAWLSCTTRDADHLSDGTTWN--VLLDLVNRHEQIVAFGINCVP 237
Query: 494 PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSI-------------L 540
+ + +R I Q H T+ + YPN G WD+ W + ++
Sbjct: 238 MTSSTNTLRSISQ-HTTLPLVCYPNSGEEWDASTKTWRGQRPDEALATSELSSSARSSLA 296
Query: 541 HYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
W+E G ++IGGCC I+ +
Sbjct: 297 DSARDWIENGASLIGGCCRTGPAFIKAL 324
>gi|455642523|gb|EMF21675.1| homocysteine methyltransferase [Streptomyces gancidicus BKS 13-15]
Length = 304
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 130/262 (49%), Gaps = 29/262 (11%)
Query: 9 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG ++Q++ H + D LWS+ L EPEA H + AGAD+ ++ YQA
Sbjct: 17 VLDGGMSNQLAAAGHDLSDA----LWSARLLADEPEAVTAAHLAYFEAGADVAITASYQA 72
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G + A +LL SV+ +A + P + AAS+GP
Sbjct: 73 TFEGFARRGTGRERAAELLALSVECARTAALR---APGPRRPRWV---------AASVGP 120
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L DGSEY G Y ++ A+L +HRP +E L A D LALETIP EA AL++
Sbjct: 121 YGAMLADGSEYRGRY--GLSVAELERFHRPRMEVLASASPDVLALETIPDTDEAEALLRA 178
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
LR G AWLS+S D T G+ + A L A D++ A+GVNC P V
Sbjct: 179 LRGL-GVPAWLSYSAADG-RTRAGQTLEDAF--ALAARADEVIAVGVNCCTPEDADHAVA 234
Query: 247 CIKQ--SHPTVQTIVYPNKGVK 266
+ P V VYPN G +
Sbjct: 235 VAARVTGKPVV---VYPNSGER 253
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 139/309 (44%), Gaps = 29/309 (9%)
Query: 264 GVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
G +LDG ++Q++ H + D LWS+ L EPEA H + + A +
Sbjct: 14 GTVVLDGGMSNQLAAAGHDLSDA----LWSARLLADEPEAVTAAHLAYFEAGADVAITAS 69
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
T +G G + E ++ AL G P AAS+G
Sbjct: 70 YQATF--EGFARRGTGRERAAELLALSVECARTAALRAPG--------PRRPRWVAASVG 119
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG +L DGSEY G Y ++ A+L +HRP +E L A D LALETIP EA AL++
Sbjct: 120 PYGAMLADGSEYRGRY--GLSVAELERFHRPRMEVLASASPDVLALETIPDTDEAEALLR 177
Query: 442 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
LR G AWLS+S D T G+ + A L A D++ A+GVNC P V
Sbjct: 178 ALRGL-GVPAWLSYSAADG-RTRAGQTLEDAF--ALAARADEVIAVGVNCCTPEDADHAV 233
Query: 502 RCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
+ P V VYPN G WD+ W E +S V W + G ++GGCC
Sbjct: 234 AVAARVTGKPVV---VYPNSGERWDARARAWTG-EATFSA-SRVTGWRDAGARLVGGCCR 288
Query: 560 VTSYEIQQM 568
V I +
Sbjct: 289 VGPEAIASV 297
>gi|162464074|ref|NP_001105012.1| homocysteine S-methyltransferase 2 [Zea mays]
gi|50400644|sp|Q9FUM9.1|HMT2_MAIZE RecName: Full=Homocysteine S-methyltransferase 2; AltName:
Full=S-methylmethionine:homocysteine methyltransferase
2; Short=SMM:Hcy S-methyltransferase 2; AltName:
Full=ZmHMT-2
gi|10732787|gb|AAG22538.1| homocysteine S-methyltransferase-2 [Zea mays]
gi|195645364|gb|ACG42150.1| homocysteine S-methyltransferase 3 [Zea mays]
gi|223948689|gb|ACN28428.1| unknown [Zea mays]
gi|414868888|tpg|DAA47445.1| TPA: homocysteine S-methyltransferase 2 [Zea mays]
Length = 339
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 143/284 (50%), Gaps = 23/284 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +++ + D PLWS+ L + P + H D++ AGA+II ++ YQA +
Sbjct: 25 VLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATI 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK------ENQTPDINLNKTFNLLTGHIETAA 122
G+S++++ +LL KSV++ A++ E TP + + AA
Sbjct: 83 QGFESKGFSKEQSENLLTKSVEIALEAREMFLKEHLEKSTP----------IQHPVLVAA 132
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
S+G YG L DGSEYSG Y ++ T+ L +HR ++ L AG D +A ETIP + EA A
Sbjct: 133 SLGSYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAEA 192
Query: 183 LVKLLREFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 241
V+LL E AW SF+ KD H G+ + T + ++ A+G+NC P +
Sbjct: 193 YVELLEECNINIPAWFSFNSKDGVHIVSGDSLIECTT--IADKCAKVGAVGINCTPPRFI 250
Query: 242 STLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD 285
L+ I++ ++YPN G + DG V + D D
Sbjct: 251 HGLILSIRKVTDK-PILIYPNSGER-YDGEKKEWVESTGVSDGD 292
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 154/324 (47%), Gaps = 20/324 (6%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G +LDG +++ + D PLWS+ L + P + H D++ +
Sbjct: 22 GRLVLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQ 79
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL-IKPSISSQ----TAA 378
T+ G E G + +E L +VE + A +L ++ S Q AA
Sbjct: 80 ATI--QGFESKG-FSKEQSENLLTK----SVEIALEAREMFLKEHLEKSTPIQHPVLVAA 132
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+G YG L DGSEYSG Y ++ T+ L +HR ++ L AG D +A ETIP + EA A
Sbjct: 133 SLGSYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAEA 192
Query: 439 LVKLLREFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
V+LL E AW SF+ KD H G+ + T + ++ A+G+NC P +
Sbjct: 193 YVELLEECNINIPAWFSFNSKDGVHIVSGDSLIECTT--IADKCAKVGAVGINCTPPRFI 250
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE--DEYSILHYVPQWLEEGVNIIG 555
L+ I++ ++YPN G +D +W+++ + + YV +W ++G +IG
Sbjct: 251 HGLILSIRKVTDK-PILIYPNSGERYDGEKKEWVESTGVSDGDFVSYVNEWCKDGAVLIG 309
Query: 556 GCCEVTSYEIQQMRIMIDEFNTKK 579
GCC T I+ + +++ K+
Sbjct: 310 GCCRTTPNTIRAIHRTLNKSPNKQ 333
>gi|385676920|ref|ZP_10050848.1| homocysteine methyltransferase [Amycolatopsis sp. ATCC 39116]
Length = 292
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 131/256 (51%), Gaps = 26/256 (10%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +++ D+ G LWS+ L +P A V HR F RAGA + ++ YQA++
Sbjct: 4 VLDGGLATELEARG-HDLSGE-LWSARLLADDPAAIVAAHRAFFRAGATVATTASYQASL 61
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+LG EA+ LL SV+L A+ +TG AASIGPYG
Sbjct: 62 AGFAELGLDRDEAVRLLQLSVELAREAR-----------------VTGDELVAASIGPYG 104
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY GHY ++ A+L +HRP E L AG D LA ET+P EA A++ L
Sbjct: 105 ATLADGSEYRGHY--GLSVAELATFHRPRAEILAAAGPDLLACETVPDVDEAEAML-LAI 161
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E AWLS++ + ++ T G+ ++ A + DQI A+GVNC P V+
Sbjct: 162 EGLDVPAWLSYTVEGES-TRAGQPLTEAFA--VARGNDQIVAVGVNCCDPRDVAAAAEIA 218
Query: 249 KQSHPTVQTIVYPNKG 264
+++ I YPN G
Sbjct: 219 REASGK-PVIAYPNSG 233
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 139/306 (45%), Gaps = 26/306 (8%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG +++ D+ G LWS+ L +P A V HR F R A +
Sbjct: 4 VLDGGLATELEARG-HDLSGE-LWSARLLADDPAAIVAAHRAFFRAGATVATT------- 54
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
Y S+ + R L++ V+ + + AASIGPYG
Sbjct: 55 --------ASYQASLAGFAELGLDRDEAVRLLQLSVELAREARVTGDELVAASIGPYGAT 106
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY GHY ++ A+L +HRP E L AG D LA ET+P EA A++ L E
Sbjct: 107 LADGSEYRGHY--GLSVAELATFHRPRAEILAAAGPDLLACETVPDVDEAEAML-LAIEG 163
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
AWLS++ + ++ T G+ ++ A + DQI A+GVNC P V+ ++
Sbjct: 164 LDVPAWLSYTVEGES-TRAGQPLTEAFA--VARGNDQIVAVGVNCCDPRDVAAAAEIARE 220
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQ 566
+ I YPN G WD+ W T D V WL GV +GGCC V+ +I
Sbjct: 221 ASGK-PVIAYPNSGETWDARARGW--TGDPRFSPDLVRDWLAAGVAYVGGCCRVSPDDIA 277
Query: 567 QMRIMI 572
+ +
Sbjct: 278 ALAAAV 283
>gi|456388069|gb|EMF53559.1| transferase [Streptomyces bottropensis ATCC 25435]
Length = 317
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 138/281 (49%), Gaps = 32/281 (11%)
Query: 7 VKLLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
V +LDG ++Q+ + H + D LWS+ L PEA E H + AGAD+ ++ Y
Sbjct: 28 VLVLDGGMSNQLESAGHDLSD----ELWSARLLAERPEALTEAHLAYFEAGADVAITASY 83
Query: 65 QANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
QA + K G A +L+ SV+ D + +G + AAS+
Sbjct: 84 QATFEGFAKRGIDGGRAAELMALSVE----------SAVDAAVEAKTRGRSGPLLVAASV 133
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG +L DGSEY G Y ++ A+L +HRP +EAL A D LALETIP EA AL+
Sbjct: 134 GPYGAMLADGSEYRGRY--GLSPAELERFHRPRLEALAAARPDVLALETIPDTDEAEALL 191
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV--- 241
+ +R G AWLS++ D T G+ + A L A+ +++ A+GVNC V
Sbjct: 192 RAVRGL-GVPAWLSYTVAGD-RTRAGQPLEEAF--ALAADSEEVVAVGVNCCASDDVDGA 247
Query: 242 -STLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTI 281
T VR + +VYPN G + D S + R T
Sbjct: 248 IETAVRVTGK-----PVVVYPNSG-ETWDASARAWTGRSTF 282
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 147/310 (47%), Gaps = 31/310 (10%)
Query: 265 VKLLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
V +LDG ++Q+ + H + D LWS+ L PEA E H + + A +
Sbjct: 28 VLVLDGGMSNQLESAGHDLSD----ELWSARLLAERPEALTEAHLAYFEAGADVAITASY 83
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
T ++ +D A+L+A +VE+ V A V+ + S AAS+GP
Sbjct: 84 QATF----EGFAKRGIDGGRAAELMAL---SVESAVDAAVEAKTRGR-SGPLLVAASVGP 135
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG +L DGSEY G Y ++ A+L +HRP +EAL A D LALETIP EA AL++
Sbjct: 136 YGAMLADGSEYRGRY--GLSPAELERFHRPRLEALAAARPDVLALETIPDTDEAEALLRA 193
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV----S 498
+R G AWLS++ D T G+ + A L A+ +++ A+GVNC V
Sbjct: 194 VRGL-GVPAWLSYTVAGD-RTRAGQPLEEAF--ALAADSEEVVAVGVNCCASDDVDGAIE 249
Query: 499 TLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
T VR + +VYPN G WD+ W T V W G +IGGCC
Sbjct: 250 TAVRVTGK-----PVVVYPNSGETWDASARAW--TGRSTFTTEQVKGWRAAGARLIGGCC 302
Query: 559 EVTSYEIQQM 568
V I +
Sbjct: 303 RVGPEAIAAI 312
>gi|450044570|ref|ZP_21837938.1| homocysteine methyltransferase [Streptococcus mutans N34]
gi|450105817|ref|ZP_21860125.1| homocysteine methyltransferase [Streptococcus mutans SF14]
gi|449201537|gb|EMC02528.1| homocysteine methyltransferase [Streptococcus mutans N34]
gi|449223986|gb|EMC23643.1| homocysteine methyltransferase [Streptococcus mutans SF14]
Length = 316
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 136/249 (54%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P H ++R+G+DI+ +S YQA+ L G S++EA +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCNYGLSQEEAEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV G D LALETIP EA ALV+LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ I P V YP
Sbjct: 204 GTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 137/300 (45%), Gaps = 33/300 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS-------IGPYGTVLRDGSEY 333
DV G LWS+ YL P H ++R I T +S + YG + +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCNYGLSQEEAEKM 88
Query: 334 SGHYVDSMTEADLIAWHR-PNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSE 392
V A W E VR P IS +GPY L DGSE
Sbjct: 89 IALTVSLAKNAREKVWQELSEKEKQVRP--------YPLIS----GDVGPYAAYLADGSE 136
Query: 393 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKA 451
Y+G+Y + + L +HR ++ LV G D LALETIP EA ALV+LL+ EFP +A
Sbjct: 137 YTGNY-GQLDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEA 195
Query: 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHP 509
++SF+ ++ T S G I L+ QI A+G+NC PS S+L++ I P
Sbjct: 196 YMSFTAQNGTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKP 253
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
V YPN G V+D H W + D +++L W G ++GGCC +I+ +
Sbjct: 254 LV---TYPNSGEVYDGQHQMWTQSADISHTLLENTKIWHTFGAKVVGGCCRTRPNDIESL 310
>gi|257057675|ref|YP_003135507.1| homocysteine methyltransferase [Saccharomonospora viridis DSM
43017]
gi|256587547|gb|ACU98680.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Saccharomonospora
viridis DSM 43017]
Length = 295
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 123/237 (51%), Gaps = 19/237 (8%)
Query: 28 GHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHK 87
G LWS+ L P+ V HR F AGA I ++ YQA+ + G A LL +
Sbjct: 28 GDALWSARLLLDAPDEIVAVHRAFYEAGAVIATTASYQASFSGFAERGIDRDTATTLLRR 87
Query: 88 SVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTE 147
SV+L A+D + PD + + F AAS+GPYG L DGSEY G Y ++
Sbjct: 88 SVELARRARD---EAPD-DGRRRF--------VAASVGPYGAALADGSEYRGRY--GLSV 133
Query: 148 ADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHT 207
A L WHRP +E L D LALET+P EA ALV+ + G AWL+++ D T
Sbjct: 134 ARLRRWHRPRLEVLAETSPDILALETVPDIDEAEALVEAVAGL-GVPAWLTYTV-DGERT 191
Query: 208 SHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
G+ ++ A + ++PD I A+GVNC P VST + + + T +VYPN G
Sbjct: 192 RAGQPLTEAF-AVAQSSPD-IVAVGVNCCTPDDVSTAL-ALAREVTTKPLVVYPNSG 245
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 138/289 (47%), Gaps = 31/289 (10%)
Query: 286 GHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD 345
G LWS+ L P+ V HR F E A I + S ++ +D T
Sbjct: 28 GDALWSARLLLDAPDEIVAVHRAFY----EAGAVIATTASYQASFSGFAERGIDRDTATT 83
Query: 346 LIAWHRPNVEALVRAGVDYLALIKPSISSQ--TAASIGPYGTVLRDGSEYSGHYVDSMTE 403
L+ R +VE RA + P + AAS+GPYG L DGSEY G Y ++
Sbjct: 84 LL---RRSVELARRARDE-----APDDGRRRFVAASVGPYGAALADGSEYRGRY--GLSV 133
Query: 404 ADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHT 463
A L WHRP +E L D LALET+P EA ALV+ + G AWL+++ D T
Sbjct: 134 ARLRRWHRPRLEVLAETSPDILALETVPDIDEAEALVEAVAGL-GVPAWLTYTV-DGERT 191
Query: 464 SHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVW 523
G+ ++ A + ++PD I A+GVNC P VST + + + T +VYPN G W
Sbjct: 192 RAGQPLTEAF-AVAQSSPD-IVAVGVNCCTPDDVSTAL-ALAREVTTKPLVVYPNSGENW 248
Query: 524 DSVHMKWLDTEDEYSILHYVPQ----WLEEGVNIIGGCCEVTSYEIQQM 568
D V W + Y P+ W EG +++GGCC V +I ++
Sbjct: 249 DPVRRTW------WGPSRYSPELARRWTAEGAHVVGGCCRVGPADIARV 291
>gi|449898074|ref|ZP_21790402.1| homocysteine methyltransferase [Streptococcus mutans R221]
gi|449936823|ref|ZP_21804199.1| homocysteine methyltransferase [Streptococcus mutans 2ST1]
gi|450154198|ref|ZP_21877615.1| homocysteine methyltransferase [Streptococcus mutans 21]
gi|449165148|gb|EMB68171.1| homocysteine methyltransferase [Streptococcus mutans 2ST1]
gi|449238044|gb|EMC36831.1| homocysteine methyltransferase [Streptococcus mutans 21]
gi|449260370|gb|EMC57872.1| homocysteine methyltransferase [Streptococcus mutans R221]
Length = 316
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 136/249 (54%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P H ++R+G+DI+ +S YQA+ L G S++EA +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV G D LALETIP EA ALV+LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ I P V YP
Sbjct: 204 GTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 137/300 (45%), Gaps = 33/300 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS-------IGPYGTVLRDGSEY 333
DV G LWS+ YL P H ++R I T +S + YG + +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 334 SGHYVDSMTEADLIAWHR-PNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSE 392
V A W E VR P IS +GPY L DGSE
Sbjct: 89 IALTVSLAKNAREKVWQELSEKEKQVRP--------YPLIS----GDVGPYAAYLADGSE 136
Query: 393 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKA 451
Y+G+Y + + L +HR ++ LV G D LALETIP EA ALV+LL+ EFP +A
Sbjct: 137 YTGNY-GQLDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEA 195
Query: 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHP 509
++SF+ ++ T S G I L+ QI A+G+NC PS S+L++ I P
Sbjct: 196 YMSFTAQNGTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKP 253
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
V YPN G V+D H W + D +++L W G ++GGCC +I+ +
Sbjct: 254 LV---TYPNSGEVYDGQHQMWTQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPNDIESL 310
>gi|291558743|emb|CBL37543.1| homocysteine S-methyltransferase [butyrate-producing bacterium
SSC/2]
Length = 318
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 137/259 (52%), Gaps = 13/259 (5%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K+ ++DGS ++ + + LW++ L +PE + H+++ +AGAD + YQ
Sbjct: 13 KIMVIDGSMSTPLENRGVSL--NSKLWTAKILAEQPELIKQVHKNYFKAGADCGITCSYQ 70
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
A++ L + GY+ +EA +L+ +V++ A+D+ + + + L G + G
Sbjct: 71 ASIPGLMENGYTLEEAENLIRSAVKIFCEARDEWWEEEGREARRAWPLCLG------AAG 124
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY G+Y +T+ L +H+ VE L AG D + ET+P+ KEA +
Sbjct: 125 PYGAYLADGSEYRGNY--GITDEQLKEFHKRRVELLHEAGADIILFETVPSLKEAKVEAE 182
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
+ E+ G W+SFSC + G I+ T+ P ++ IGVNC +P +++ L+
Sbjct: 183 IAEEY-GYDYWISFSCLSENIICEGTPIAECATTFAKGYP-HLKMIGVNCTKPEYITGLI 240
Query: 246 RCIKQSHPTVQTIVYPNKG 264
IK+ + + VYPN G
Sbjct: 241 HKIKE-NCDIPIGVYPNSG 258
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 148/324 (45%), Gaps = 30/324 (9%)
Query: 254 TVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH 313
+++ I+ NK + ++DGS ++ + + LW++ L +PE + H+++ +
Sbjct: 4 SIENIIKENK-IMVIDGSMSTPLENRGVSL--NSKLWTAKILAEQPELIKQVHKNYFKAG 60
Query: 314 IETA------ASIGPY---GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY 364
+ ASI G L + V EA W EA RA
Sbjct: 61 ADCGITCSYQASIPGLMENGYTLEEAENLIRSAVKIFCEARDEWWEEEGREAR-RAWPLC 119
Query: 365 LALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY 424
L + GPYG L DGSEY G+Y +T+ L +H+ VE L AG D
Sbjct: 120 LG------------AAGPYGAYLADGSEYRGNY--GITDEQLKEFHKRRVELLHEAGADI 165
Query: 425 LALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 484
+ ET+P+ KEA ++ E+ G W+SFSC + G I+ T+ P +
Sbjct: 166 ILFETVPSLKEAKVEAEIAEEY-GYDYWISFSCLSENIICEGTPIAECATTFAKGYP-HL 223
Query: 485 QAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVP 544
+ IGVNC +P +++ L+ IK+ + + VYPN G +D+V W + S Y
Sbjct: 224 KMIGVNCTKPEYITGLIHKIKE-NCDIPIGVYPNSGEEYDAVKKVWFGKQSALSFEQYAY 282
Query: 545 QWLEEGVNIIGGCCEVTSYEIQQM 568
+++ G + +GGCC + ++++
Sbjct: 283 NYMKSGASAVGGCCTTVAKHVEEV 306
>gi|24379395|ref|NP_721350.1| homocysteine methyltransferase [Streptococcus mutans UA159]
gi|449865405|ref|ZP_21778963.1| homocysteine methyltransferase [Streptococcus mutans U2B]
gi|449869812|ref|ZP_21780306.1| homocysteine methyltransferase [Streptococcus mutans 8ID3]
gi|449884067|ref|ZP_21785483.1| homocysteine methyltransferase [Streptococcus mutans SA38]
gi|449914915|ref|ZP_21795915.1| homocysteine methyltransferase [Streptococcus mutans 15JP3]
gi|449924722|ref|ZP_21799842.1| homocysteine methyltransferase [Streptococcus mutans 4SM1]
gi|449950729|ref|ZP_21808382.1| homocysteine methyltransferase [Streptococcus mutans 11SSST2]
gi|449971294|ref|ZP_21814335.1| homocysteine methyltransferase [Streptococcus mutans 2VS1]
gi|450035196|ref|ZP_21834885.1| homocysteine methyltransferase [Streptococcus mutans M21]
gi|450040664|ref|ZP_21836947.1| homocysteine methyltransferase [Streptococcus mutans T4]
gi|450050888|ref|ZP_21840513.1| homocysteine methyltransferase [Streptococcus mutans NFSM1]
gi|450059611|ref|ZP_21843494.1| homocysteine methyltransferase [Streptococcus mutans NLML4]
gi|450077437|ref|ZP_21850437.1| homocysteine methyltransferase [Streptococcus mutans N3209]
gi|24377325|gb|AAN58656.1|AE014935_8 putative methyltransferase [Streptococcus mutans UA159]
gi|449157303|gb|EMB60747.1| homocysteine methyltransferase [Streptococcus mutans 15JP3]
gi|449157709|gb|EMB61145.1| homocysteine methyltransferase [Streptococcus mutans 8ID3]
gi|449162357|gb|EMB65498.1| homocysteine methyltransferase [Streptococcus mutans 4SM1]
gi|449167044|gb|EMB69952.1| homocysteine methyltransferase [Streptococcus mutans 11SSST2]
gi|449172289|gb|EMB74920.1| homocysteine methyltransferase [Streptococcus mutans 2VS1]
gi|449195835|gb|EMB97143.1| homocysteine methyltransferase [Streptococcus mutans M21]
gi|449198648|gb|EMB99753.1| homocysteine methyltransferase [Streptococcus mutans T4]
gi|449202305|gb|EMC03234.1| homocysteine methyltransferase [Streptococcus mutans NFSM1]
gi|449202928|gb|EMC03815.1| homocysteine methyltransferase [Streptococcus mutans NLML4]
gi|449211242|gb|EMC11656.1| homocysteine methyltransferase [Streptococcus mutans N3209]
gi|449249354|gb|EMC47489.1| homocysteine methyltransferase [Streptococcus mutans SA38]
gi|449264256|gb|EMC61602.1| homocysteine methyltransferase [Streptococcus mutans U2B]
Length = 316
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 136/249 (54%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P H ++R+G+DI+ +S YQA+ L G S++EA +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV G D LALETIP EA ALV+LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ I P V YP
Sbjct: 204 GTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 137/300 (45%), Gaps = 33/300 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS-------IGPYGTVLRDGSEY 333
DV G LWS+ YL P H ++R I T +S + YG + +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 334 SGHYVDSMTEADLIAWHR-PNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSE 392
V A W E VR P IS +GPY L DGSE
Sbjct: 89 IALTVSLAKNAREKVWQELSEKEKQVRP--------YPLIS----GDVGPYAAYLADGSE 136
Query: 393 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKA 451
Y+G+Y + + L +HR ++ LV G D LALETIP EA ALV+LL+ EFP +A
Sbjct: 137 YTGNY-GQLDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEA 195
Query: 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHP 509
++SF+ ++ T S G I L+ QI A+G+NC PS S+L++ I P
Sbjct: 196 YMSFTAQNGTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKP 253
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
V YPN G V+D H W + D +++L W G ++GGCC +I+ +
Sbjct: 254 LV---TYPNSGEVYDGQHQMWTQSADISHTLLENTKIWHTFGAKVVGGCCRTRPNDIESL 310
>gi|386382408|ref|ZP_10068021.1| homocysteine methyltransferase [Streptomyces tsukubaensis
NRRL18488]
gi|385670166|gb|EIF93296.1| homocysteine methyltransferase [Streptomyces tsukubaensis
NRRL18488]
Length = 312
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 133/257 (51%), Gaps = 26/257 (10%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG S++ D+ G LWS+ LT +P HR ++RAGA ++ ++ YQA+
Sbjct: 17 VLDGGLASRLEEQG-SDLSGE-LWSARLLTEDPGRIEAAHRAYVRAGARVLITASYQASY 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ + G + EA L +SV+L +A + +T D + AAS+GPYG
Sbjct: 75 EAFARRGMTRTEAGRLFARSVRLARAAAE---ETAD------------EVWVAASVGPYG 119
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
VL DGSEY G Y +T +L +HRP VEAL A D LALET+P EA AL++
Sbjct: 120 AVLADGSEYRGRY--GLTVRELERFHRPRVEALAAADPDVLALETVPDTDEAEALLRAA- 176
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV-RC 247
E G WLS++ T T G+ + +A L+ DQ+ A GVNC P + V R
Sbjct: 177 EGCGVPVWLSYTVS-GTRTRAGQSLDTAFG--LVRGLDQVIAAGVNCCEPPDTTAAVTRA 233
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + V + YPN G
Sbjct: 234 ARLTGKPV--VAYPNSG 248
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 145/317 (45%), Gaps = 35/317 (11%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
++ + P + + +G +LDG S++ D+ G LWS+ LT +P HR
Sbjct: 1 MRPARPLAEALA---EGPLVLDGGLASRLEEQG-SDLSGE-LWSARLLTEDPGRIEAAHR 55
Query: 308 DFIRGHIE---TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY 364
++R TA+ Y R G MT + +V L RA +
Sbjct: 56 AYVRAGARVLITASYQASYEAFARRG----------MTRTEAGRLFARSVR-LARAAAEE 104
Query: 365 LALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY 424
A AAS+GPYG VL DGSEY G Y +T +L +HRP VEAL A D
Sbjct: 105 TA-----DEVWVAASVGPYGAVLADGSEYRGRY--GLTVRELERFHRPRVEALAAADPDV 157
Query: 425 LALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 484
LALET+P EA AL++ E G WLS++ T T G+ + +A L+ DQ+
Sbjct: 158 LALETVPDTDEAEALLRAA-EGCGVPVWLSYTVS-GTRTRAGQSLDTAFG--LVRGLDQV 213
Query: 485 QAIGVNCVRPSHVSTLV-RCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYV 543
A GVNC P + V R + + V + YPN G WD+ W YS H V
Sbjct: 214 IAAGVNCCEPPDTTAAVTRAARLTGKPV--VAYPNSGEAWDARRRAWTGPVT-YSA-HRV 269
Query: 544 PQWLEEGVNIIGGCCEV 560
WL G ++GGCC +
Sbjct: 270 ADWLGAGARLVGGCCRI 286
>gi|345009879|ref|YP_004812233.1| homocysteine S-methyltransferase [Streptomyces violaceusniger Tu
4113]
gi|344036228|gb|AEM81953.1| homocysteine S-methyltransferase [Streptomyces violaceusniger Tu
4113]
Length = 329
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 132/268 (49%), Gaps = 21/268 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG ++Q+ D LWS+ L +P H + RAGA ++ +S YQA
Sbjct: 18 VLDGGLSNQLEAQGCDLSD--ELWSARLLADDPGQIEAAHTAYARAGARVLITSSYQATY 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNS-----------AKDKENQTPDINLNKTFNLLTGH 117
+ G ++A LL +SV+L + A+D+ + ++ +
Sbjct: 76 EGFAHRGVGHEQATALLRRSVELARTGAERAATERATARDQAAGDRAVGGDRAADDRAAE 135
Query: 118 -IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA 176
+ AAS+GPYG +L DGSEY G Y ++ A+L+ +HRP +EAL AG D LALET+P
Sbjct: 136 PVWVAASVGPYGAMLADGSEYRGRY--GLSVAELVRFHRPRIEALAAAGPDVLALETVPD 193
Query: 177 EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 236
EA AL+ + E G WLS+S +T T G+ + A L A DQ+ A+GVNC
Sbjct: 194 ADEAAALLSAV-EGCGVPVWLSYSIAGET-TRAGQPLREAFA--LAAGVDQVIAVGVNCC 249
Query: 237 RPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
P V I +VYPN G
Sbjct: 250 EPGDADRAVE-IAADITGKPVVVYPNSG 276
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 142/335 (42%), Gaps = 45/335 (13%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
+G +LDG ++Q+ D LWS+ L +P H + R +
Sbjct: 13 ERGPLVLDGGLSNQLEAQGCDLSD--ELWSARLLADDPGQIEAAHTAYARAGARVLITSS 70
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA---- 377
T Y G + A R +VE L R G + A + + Q A
Sbjct: 71 YQAT-------YEGFAHRGVGHEQATALLRRSVE-LARTGAERAATERATARDQAAGDRA 122
Query: 378 ------------------ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR 419
AS+GPYG +L DGSEY G Y ++ A+L+ +HRP +EAL
Sbjct: 123 VGGDRAADDRAAEPVWVAASVGPYGAMLADGSEYRGRY--GLSVAELVRFHRPRIEALAA 180
Query: 420 AGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 479
AG D LALET+P EA AL+ + E G WLS+S +T T G+ + A L A
Sbjct: 181 AGPDVLALETVPDADEAAALLSAV-EGCGVPVWLSYSIAGET-TRAGQPLREAFA--LAA 236
Query: 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLD--TEDEY 537
DQ+ A+GVNC P V I +VYPN G WD+ W T D
Sbjct: 237 GVDQVIAVGVNCCEPGDADRAVE-IAADITGKPVVVYPNSGEEWDATARSWRGRATFDP- 294
Query: 538 SILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMI 572
V W + G +IGGCC V I ++ ++
Sbjct: 295 ---GRVKAWRDAGARLIGGCCRVGPERIAELAAVV 326
>gi|449886598|ref|ZP_21786302.1| homocysteine methyltransferase [Streptococcus mutans SA41]
gi|449254050|gb|EMC51977.1| homocysteine methyltransferase [Streptococcus mutans SA41]
Length = 316
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 136/249 (54%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P H ++R+G+DI+ +S YQA+ L G S++EA +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV G D LALETIP EA ALV+LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ I P V YP
Sbjct: 204 GTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKRIADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 137/300 (45%), Gaps = 33/300 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS-------IGPYGTVLRDGSEY 333
DV G LWS+ YL P H ++R I T +S + YG + +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 334 SGHYVDSMTEADLIAWHR-PNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSE 392
V A W E VR P IS +GPY L DGSE
Sbjct: 89 IALTVSLAKNAREKVWQELSEKEKQVRP--------YPLIS----GDVGPYAAYLADGSE 136
Query: 393 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKA 451
Y+G+Y + + L +HR ++ LV G D LALETIP EA ALV+LL+ EFP +A
Sbjct: 137 YTGNY-GQLDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEA 195
Query: 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHP 509
++SF+ ++ T S G I L+ QI A+G+NC PS S+L++ I P
Sbjct: 196 YMSFTAQNGTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKRIADITDKP 253
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
V YPN G V+D H W + D +++L W G ++GGCC +I+ +
Sbjct: 254 LV---TYPNSGEVYDGQHQMWTQSADISHTLLENTKIWHTFGAKVVGGCCRTRPNDIESL 310
>gi|167765702|ref|ZP_02437755.1| hypothetical protein CLOSS21_00190 [Clostridium sp. SS2/1]
gi|167712610|gb|EDS23189.1| homocysteine S-methyltransferase [Clostridium sp. SS2/1]
Length = 319
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 137/259 (52%), Gaps = 13/259 (5%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K+ ++DGS ++ + + LW++ L +PE + H+++ +AGAD + YQ
Sbjct: 14 KIMVIDGSMSTPLENRGVSL--NSKLWTAKILAEQPELIKQVHKNYFKAGADCGITCSYQ 71
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
A++ L + GY+ +EA +L+ +V++ A+D+ + + + L G + G
Sbjct: 72 ASIPGLMENGYTLEEAENLIRSAVKIFCEARDEWWEEEGREARRAWPLCLG------AAG 125
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY G+Y +T+ L +H+ VE L AG D + ET+P+ KEA +
Sbjct: 126 PYGAYLADGSEYRGNY--GITDEQLKEFHKRRVELLHEAGADIILFETVPSLKEAKVEAE 183
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
+ E+ G W+SFSC + G I+ T+ P ++ IGVNC +P +++ L+
Sbjct: 184 IAEEY-GYDYWISFSCLSENIICEGTPIAECATTFAKGYP-HLKMIGVNCTKPEYITGLI 241
Query: 246 RCIKQSHPTVQTIVYPNKG 264
IK+ + + VYPN G
Sbjct: 242 HKIKE-NCDIPIGVYPNSG 259
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 148/324 (45%), Gaps = 30/324 (9%)
Query: 254 TVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH 313
+++ I+ NK + ++DGS ++ + + LW++ L +PE + H+++ +
Sbjct: 5 SIENIIKENK-IMVIDGSMSTPLENRGVSL--NSKLWTAKILAEQPELIKQVHKNYFKAG 61
Query: 314 IETA------ASIGPY---GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY 364
+ ASI G L + V EA W EA RA
Sbjct: 62 ADCGITCSYQASIPGLMENGYTLEEAENLIRSAVKIFCEARDEWWEEEGREAR-RAWPLC 120
Query: 365 LALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY 424
L + GPYG L DGSEY G+Y +T+ L +H+ VE L AG D
Sbjct: 121 LG------------AAGPYGAYLADGSEYRGNY--GITDEQLKEFHKRRVELLHEAGADI 166
Query: 425 LALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 484
+ ET+P+ KEA ++ E+ G W+SFSC + G I+ T+ P +
Sbjct: 167 ILFETVPSLKEAKVEAEIAEEY-GYDYWISFSCLSENIICEGTPIAECATTFAKGYP-HL 224
Query: 485 QAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVP 544
+ IGVNC +P +++ L+ IK+ + + VYPN G +D+V W + S Y
Sbjct: 225 KMIGVNCTKPEYITGLIHKIKE-NCDIPIGVYPNSGEEYDAVKKVWFGKQSALSFEQYAY 283
Query: 545 QWLEEGVNIIGGCCEVTSYEIQQM 568
+++ G + +GGCC + ++++
Sbjct: 284 NYMKSGASAVGGCCTTVAKHVEEV 307
>gi|168001020|ref|XP_001753213.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695499|gb|EDQ81842.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 341
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 133/258 (51%), Gaps = 19/258 (7%)
Query: 11 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDN 70
DG F +Q+ RH D PLWS++ L T P H+++++AGA +I ++ YQA +
Sbjct: 35 DGGFATQLERHGADIND--PLWSALCLITMPHLIRTVHKEYLQAGASVISTASYQATIQG 92
Query: 71 LTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAASIGPY 127
G S +EA DLL SV++ +D KE Q + L AAS+G Y
Sbjct: 93 FQSRGLSTKEAEDLLQTSVRIAQEERDSFWKEYQN-KVRAGTAHAGLYQRALAAASVGSY 151
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G +G Y SMT L +HR + L AG D +ALETIP + E ALV+LL
Sbjct: 152 G---------AGDYGPSMTVDKLKDFHRRRLMVLADAGPDLIALETIPCKLETQALVELL 202
Query: 188 REFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
E + AW+SF+ KD T+ G+ +S V L Q++A+G+NC P + L++
Sbjct: 203 AEENLRVPAWISFNSKDGTNVVSGDSLSDCVA--LADKCTQVRAVGINCTPPRFILDLIQ 260
Query: 247 CIKQSHPTVQTIVYPNKG 264
+++ + +VYPN G
Sbjct: 261 AVRKVTNKL-IVVYPNSG 277
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 160/333 (48%), Gaps = 31/333 (9%)
Query: 254 TVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH 313
T+ ++ G + DG F +Q+ RH D PLWS++ L T P H+++++
Sbjct: 20 TITELLKQAGGCVVTDGGFATQLERHGADIND--PLWSALCLITMPHLIRTVHKEYLQAG 77
Query: 314 ---IETA---ASIGPY---GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY 364
I TA A+I + G ++ + V E W + VRAG +
Sbjct: 78 ASVISTASYQATIQGFQSRGLSTKEAEDLLQTSVRIAQEERDSFW--KEYQNKVRAGTAH 135
Query: 365 LALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY 424
L + +++ AAS+G YG +G Y SMT L +HR + L AG D
Sbjct: 136 AGLYQRALA---AASVGSYG---------AGDYGPSMTVDKLKDFHRRRLMVLADAGPDL 183
Query: 425 LALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQ 483
+ALETIP + E ALV+LL E + AW+SF+ KD T+ G+ +S V L Q
Sbjct: 184 IALETIPCKLETQALVELLAEENLRVPAWISFNSKDGTNVVSGDSLSDCVA--LADKCTQ 241
Query: 484 IQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE--DEYSILH 541
++A+G+NC P + L++ +++ + +VYPN G +D +W+++ + +
Sbjct: 242 VRAVGINCTPPRFILDLIQAVRKVTNKL-IVVYPNSGEYYDPEIKQWVESTGVSDTDFVS 300
Query: 542 YVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDE 574
YV +W G +IGGCC T I+ + + E
Sbjct: 301 YVHEWRNAGAQLIGGCCRTTPNTIEAISKALRE 333
>gi|134100425|ref|YP_001106086.1| homocysteine methyltransferase [Saccharopolyspora erythraea NRRL
2338]
gi|291007321|ref|ZP_06565294.1| homocysteine methyltransferase [Saccharopolyspora erythraea NRRL
2338]
gi|133913048|emb|CAM03161.1| homocysteine S-methyltransferase [Saccharopolyspora erythraea NRRL
2338]
Length = 297
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 143/308 (46%), Gaps = 34/308 (11%)
Query: 267 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH--IETAASIGP 322
+LDG +++ H + D LWS+ L PE V H F R I T AS
Sbjct: 13 VLDGGLATELEARGHDLSD----ELWSARLLHDAPEEIVAAHEAFFRAGAVIATTASYQ- 67
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
+ + G + D A R +VE L R + L +P AAS+GP
Sbjct: 68 --------ASFPGFGARGIGRGDAAALMRRSVE-LARQAAERL---EPDRPRWVAASVGP 115
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY G Y +T +DL+ +HRP +E L AG D LALET+P EA+ALV+
Sbjct: 116 YGATLADGSEYRGRY--GLTVSDLVGFHRPRLEVLAGAGPDVLALETVPDLDEAIALVEA 173
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
+ G AWLS++ D T G+ ++ A + + + I A+GVNC P+ V+ +
Sbjct: 174 VDGI-GVPAWLSYTVA-DGRTRAGQPLAEAFE--VARDHEDIVAVGVNCCSPAEVAPALA 229
Query: 503 CIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEV 560
+Q P V YPN G WD+ W T W EG +IGGCC V
Sbjct: 230 IARQVTGKPVV---AYPNSGEDWDAHCRTW--TGASRFPGTAASAWAHEGAAVIGGCCRV 284
Query: 561 TSYEIQQM 568
+I +
Sbjct: 285 RPDDIADL 292
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 130/261 (49%), Gaps = 32/261 (12%)
Query: 9 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG +++ H + D LWS+ L PE V H F RAGA I ++ YQA
Sbjct: 13 VLDGGLATELEARGHDLSD----ELWSARLLHDAPEEIVAAHEAFFRAGAVIATTASYQA 68
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK-ENQTPDINLNKTFNLLTGHIETAASIG 125
+ G +A L+ +SV+L A ++ E P AAS+G
Sbjct: 69 SFPGFGARGIGRGDAAALMRRSVELARQAAERLEPDRPRW--------------VAASVG 114
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L DGSEY G Y +T +DL+ +HRP +E L AG D LALET+P EA+ALV+
Sbjct: 115 PYGATLADGSEYRGRY--GLTVSDLVGFHRPRLEVLAGAGPDVLALETVPDLDEAIALVE 172
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
+ G AWLS++ D T G+ ++ A + + + I A+GVNC P+ V+ +
Sbjct: 173 AVDGI-GVPAWLSYTVA-DGRTRAGQPLAEAFE--VARDHEDIVAVGVNCCSPAEVAPAL 228
Query: 246 RCIKQ--SHPTVQTIVYPNKG 264
+Q P V YPN G
Sbjct: 229 AIARQVTGKPVV---AYPNSG 246
>gi|450182408|ref|ZP_21888311.1| homocysteine methyltransferase [Streptococcus mutans 24]
gi|449244781|gb|EMC43142.1| homocysteine methyltransferase [Streptococcus mutans 24]
Length = 316
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 136/249 (54%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P H ++R+G+DI+ +S YQA+ L G S++EA +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV G D LALETIP EA ALV+LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ I P V YP
Sbjct: 204 GTTISDGTAIEEVAE--LIDKSSQILALGINCSSPSVYSSLLKKIADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 137/300 (45%), Gaps = 33/300 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS-------IGPYGTVLRDGSEY 333
DV G LWS+ YL P H ++R I T +S + YG + +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 334 SGHYVDSMTEADLIAWHR-PNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSE 392
V A W E VR P IS +GPY L DGSE
Sbjct: 89 IALTVSLAKNAREKVWQELSEKEKQVRP--------YPLIS----GDVGPYAAYLADGSE 136
Query: 393 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKA 451
Y+G+Y + + L +HR ++ LV G D LALETIP EA ALV+LL+ EFP +A
Sbjct: 137 YTGNY-GQLDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEA 195
Query: 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHP 509
++SF+ ++ T S G I L+ QI A+G+NC PS S+L++ I P
Sbjct: 196 YMSFTAQNGTTISDGTAIEEVAE--LIDKSSQILALGINCSSPSVYSSLLKKIADITDKP 253
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
V YPN G V+D H W + D +++L W G ++GGCC +I+ +
Sbjct: 254 LV---TYPNSGEVYDGQHQMWTQSADISHTLLENTKIWHTFGAKVVGGCCRTRPNDIESL 310
>gi|228946121|ref|ZP_04108456.1| Homocysteine S-methyltransferase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228813534|gb|EEM59820.1| Homocysteine S-methyltransferase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 236
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 109/192 (56%), Gaps = 7/192 (3%)
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
AS+G YG L DGSEY G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA
Sbjct: 34 ASVGLYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEAR 91
Query: 438 ALVKLLREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
L LLREFP AWLSFS K++ S G +L+ A +QI AIG+NC +
Sbjct: 92 VLDTLLREFPETYAWLSFSLKNEKEISQGIKLVECARA---FEKSEQIVAIGINCAPVTV 148
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556
V+ ++ ++++ IVYPN G ++S W D E S+ +W + G +IGG
Sbjct: 149 VTGAIQELRENTKK-PIIVYPNSGETYNSETKTWHDHEQCNSLDIQSEEWYQAGARLIGG 207
Query: 557 CCEVTSYEIQQM 568
CC T Y I+++
Sbjct: 208 CCRTTPYHIEEI 219
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 103/187 (55%), Gaps = 20/187 (10%)
Query: 82 LDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYS 138
++L+ K+V L A+D KEN N+ L+ AS+G YG L DGSEY
Sbjct: 1 MELIGKTVLLARRARDDFWKEN----TQTNRPKRLVV------ASVGLYGAYLADGSEYV 50
Query: 139 GHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLS 198
G+Y +T+ L +HR + AL+ AG D LA ETIP+ +EA L LLREFP AWLS
Sbjct: 51 GNY--GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDTLLREFPETYAWLS 108
Query: 199 FSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQT 257
FS K++ S G +L+ A +QI AIG+NC + V+ ++ ++++
Sbjct: 109 FSLKNEKEISQGIKLVECARA---FEKSEQIVAIGINCAPVTVVTGAIQELRENTKK-PI 164
Query: 258 IVYPNKG 264
IVYPN G
Sbjct: 165 IVYPNSG 171
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 318 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
AS+G YG L DGSEY G+Y +T+ L +HR + AL+ AG D LA
Sbjct: 34 ASVGLYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLAF 81
>gi|55822554|ref|YP_140995.1| homocysteine methyltransferase [Streptococcus thermophilus
CNRZ1066]
gi|55738539|gb|AAV62180.1| homocysteine S-methyltransferase (S-methylmethionine)
[Streptococcus thermophilus CNRZ1066]
Length = 322
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 138/249 (55%), Gaps = 16/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
D+ G LWS+ YL + E E H ++ AGAD+I +S YQA + L + G +E+ A +
Sbjct: 36 DISGK-LWSAKYLLEKSEVIQELHETYVAAGADLITTSSYQAILPGLVEAGLTEKAAEQI 94
Query: 85 LHKSVQLMNSAKDKENQTPD--INLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV 142
+ +V+L +A+DK D + + L++G +GPY L +GSEYSG Y
Sbjct: 95 IVLTVRLAKAARDKVWGALDETEKAKRPYPLISG------DVGPYAAYLANGSEYSGDY- 147
Query: 143 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-REFPGQKAWLSFSC 201
+T +L +HRP ++ L+ GVD LALETIP E AL++LL EFP +A++SF+
Sbjct: 148 GQITIKELKDFHRPRIQILLDQGVDLLALETIPNRLETQALIELLAEEFPEAEAYMSFTV 207
Query: 202 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 261
+ S G S A + L++ +QI A+G+NC P + + +K + + I YP
Sbjct: 208 QIPDAISDG--TSLAEMAKLVSQSNQILAVGINCSSPLLYNQALAFLKNAGKAL--ITYP 263
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 264 NSG-EIYDG 271
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
+ +GPY L +GSEYSG Y +T +L +HRP ++ L+ GVD LALETIP E
Sbjct: 127 SGDVGPYAAYLANGSEYSGDY-GQITIKELKDFHRPRIQILLDQGVDLLALETIPNRLET 185
Query: 437 LALVKLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
AL++LL EFP +A++SF+ + S G S A + L++ +QI A+G+NC P
Sbjct: 186 QALIELLAEEFPEAEAYMSFTVQIPDAISDG--TSLAEMAKLVSQSNQILAVGINCSSPL 243
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQW-LEEGVNI 553
+ + +K + + I YPN G ++D W +D +++ + W GV I
Sbjct: 244 LYNQALAFLKNAGKAL--ITYPNSGEIYDGDSQTWKPKDKDALTLVEHSKYWHAHFGVKI 301
Query: 554 IGGCCEVTSYEIQQMRIMIDEFNT 577
+GGCC +I+ + EF T
Sbjct: 302 LGGCCRTRPNDIKS---LYQEFRT 322
>gi|313893891|ref|ZP_07827457.1| putative homocysteine S-methyltransferase [Veillonella sp. oral
taxon 158 str. F0412]
gi|313441455|gb|EFR59881.1| putative homocysteine S-methyltransferase [Veillonella sp. oral
taxon 158 str. F0412]
Length = 341
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 139/277 (50%), Gaps = 30/277 (10%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R+ H LWS+ L +P+ + H ++ GADIIQSS YQA V
Sbjct: 22 VLDGALGTELERYGCNI--QHKLWSAKVLMEQPDVIKKIHITYLAVGADIIQSSGYQATV 79
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTP--------DINLNK-TFNLLTGHIE 119
LGY +EA++L+ SV+L A+++ + I L + T N + E
Sbjct: 80 AGFKGLGYGTEEAIELVKLSVRLAVQARNEFLEAKASGALMLRGITLGEETSNGVKYFSE 139
Query: 120 -------TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE 172
AAS+GPYG L DGSEY G Y D TE L +H P + D L+ E
Sbjct: 140 GALPKPLVAASVGPYGAFLADGSEYRG-YPDVQTEY-LEVFHIPRLALFAEENPDILSFE 197
Query: 173 TIPAEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ 229
TIP+ E +A+ + + + G AW++F+CKD+ H + GE I P +
Sbjct: 198 TIPSYDETIAIARAMSDPFTSRGIPAWIAFACKDEHHVASGETIIKCAEMIDKVRP--VT 255
Query: 230 AIGVNCVRPSHVSTLVRCIK--QSHPTVQTIVYPNKG 264
IG+NC +P +V +L++ I+ P VYPN G
Sbjct: 256 GIGINCTKPEYVESLIKDIRTVTDKPIA---VYPNLG 289
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 151/330 (45%), Gaps = 42/330 (12%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
+ +KG +LDG+ +++ R+ H LWS+ L +P+ + H ++ +
Sbjct: 14 IIKDKGALVLDGALGTELERYGCNI--QHKLWSAKVLMEQPDVIKKIHITYLAVGADIIQ 71
Query: 319 SIGPYGTV-----LRDGSEYSGHYVDSMTEADLIAWH-----RPNVEALVRA-------- 360
S G TV L G+E + V + A + + + ++R
Sbjct: 72 SSGYQATVAGFKGLGYGTEEAIELVKLSVRLAVQARNEFLEAKASGALMLRGITLGEETS 131
Query: 361 -GVDYL---ALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA 416
GV Y AL KP + AAS+GPYG L DGSEY G Y D TE L +H P +
Sbjct: 132 NGVKYFSEGALPKPLV----AASVGPYGAFLADGSEYRG-YPDVQTEY-LEVFHIPRLAL 185
Query: 417 LVRAGVDYLALETIPAEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSAV 473
D L+ ETIP+ E +A+ + + + G AW++F+CKD+ H + GE I
Sbjct: 186 FAEENPDILSFETIPSYDETIAIARAMSDPFTSRGIPAWIAFACKDEHHVASGETIIKCA 245
Query: 474 TSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK--QSHPTVQTIVYPNKGGVWDSVHMKWL 531
P + IG+NC +P +V +L++ I+ P VYPN G +DS W
Sbjct: 246 EMIDKVRP--VTGIGINCTKPEYVESLIKDIRTVTDKPIA---VYPNLGESYDSKTKTWY 300
Query: 532 DTEDEYSILHYVPQWLEEGVNIIGGCCEVT 561
D S + YV W + G IIGGCC T
Sbjct: 301 G--DPASFVDYVDVWRKAGAEIIGGCCRTT 328
>gi|379746514|ref|YP_005337335.1| homocysteine methyltransferase [Mycobacterium intracellulare ATCC
13950]
gi|378798878|gb|AFC43014.1| homocysteine methyltransferase [Mycobacterium intracellulare ATCC
13950]
Length = 314
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 126/260 (48%), Gaps = 28/260 (10%)
Query: 9 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG +++ H + D LWS+ L P V H + RAGA I ++ YQA
Sbjct: 15 VLDGGLATELEARGHDLSD----RLWSARLLADAPREIVAVHAAYFRAGATIATTASYQA 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G +E LL +SV+L +A+D+ + AAS+GP
Sbjct: 71 SFEGFAARGLDRRETDLLLRRSVELAKAARDEAGAA--------------GLLVAASVGP 116
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y ++ L WHRP +E L AG D LA ET+P EA ALV +
Sbjct: 117 YGAALADGSEYRGRY--GLSVGALARWHRPRLETLADAGADVLACETVPDVDEAEALVDV 174
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R G AWLS++ D T G+ ++ A + A D+I A+GVNC P V L
Sbjct: 175 VRSV-GMPAWLSYTI-DGARTRAGQPLTEAFA--VAAGVDEIVAVGVNCCAPDDV--LPA 228
Query: 247 CIKQSHPTVQTIVYPNKGVK 266
S IVYPN G +
Sbjct: 229 IASASEIGKPVIVYPNSGER 248
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 141/307 (45%), Gaps = 30/307 (9%)
Query: 264 GVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
G +LDG +++ H + D LWS+ L P V H + R A+I
Sbjct: 12 GTVVLDGGLATELEARGHDLSD----RLWSARLLADAPREIVAVHAAYFR----AGATIA 63
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
+ ++ +D E DL+ R +VE L +A D + AAS+G
Sbjct: 64 TTASYQASFEGFAARGLDRR-ETDLL--LRRSVE-LAKAARDEAG----AAGLLVAASVG 115
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG L DGSEY G Y ++ L WHRP +E L AG D LA ET+P EA ALV
Sbjct: 116 PYGAALADGSEYRGRY--GLSVGALARWHRPRLETLADAGADVLACETVPDVDEAEALVD 173
Query: 442 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
++R G AWLS++ D T G+ ++ A + A D+I A+GVNC P V L
Sbjct: 174 VVRSV-GMPAWLSYTI-DGARTRAGQPLTEAFA--VAAGVDEIVAVGVNCCAPDDV--LP 227
Query: 502 RCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVT 561
S IVYPN G WD W+ + L QW+ G I+GGCC V
Sbjct: 228 AIASASEIGKPVIVYPNSGERWDG--RAWVGPRTFATGL--AAQWVSAGARIVGGCCRVG 283
Query: 562 SYEIQQM 568
+I ++
Sbjct: 284 PVDIAEL 290
>gi|256592582|gb|ACV03421.1| selenocysteine methyltransferase [Astragalus pectinatus]
Length = 338
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 138/269 (51%), Gaps = 26/269 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++ G +++ RH D PLWS+ L + P + H D++ GADII ++ YQA +
Sbjct: 18 IIAGGLGTELERHGADLND--PLWSAKCLYSSPHLIHQVHLDYLENGADIILTASYQATI 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKD----KENQTPDINLNKTFNLLTGHIETAASI 124
G+S++E LL +SV++ A+D + ++ N + + L I A SI
Sbjct: 76 QGFKAKGFSDEEGEALLRRSVEIAREARDLYYQRCAESSSDNGDDSRILKPRPILIAGSI 135
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
G YG L DGSE+SG+Y D++ L +HR V+ L +GVD LA +P + EA A
Sbjct: 136 GSYGAYLADGSEFSGNYGDAIKLETLKDFHRRRVQILADSGVDLLAFGAVPNKLEAQAYA 195
Query: 185 KLLRE----FPGQKAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVNCVR 237
LL E P AW +F+ KD T+ G+ I S SC D++ A+G++C
Sbjct: 196 DLLEEENIITP---AWFAFNSKDGTNVVSGDSIEECGSIAESC-----DKVVAVGISCTP 247
Query: 238 PSHVSTLVRCIKQ--SHPTVQTIVYPNKG 264
P + L+ +K+ + P V +YPN G
Sbjct: 248 PRFIHDLIHLLKKVTAKPVV---IYPNSG 273
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 143/326 (43%), Gaps = 44/326 (13%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
++ G +++ RH D PLWS+ L + P + H D++ + + T+
Sbjct: 18 IIAGGLGTELERHGADLND--PLWSAKCLYSSPHLIHQVHLDYLENGADIILTASYQATI 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ----------- 375
G ++ + A R +VE A Y S S
Sbjct: 76 -------QGFKAKGFSDEEGEALLRRSVEIAREARDLYYQRCAESSSDNGDDSRILKPRP 128
Query: 376 --TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
A SIG YG L DGSE+SG+Y D++ L +HR V+ L +GVD LA +P +
Sbjct: 129 ILIAGSIGSYGAYLADGSEFSGNYGDAIKLETLKDFHRRRVQILADSGVDLLAFGAVPNK 188
Query: 434 KEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQA 486
EA A LL E P AW +F+ KD T+ G+ I S SC D++ A
Sbjct: 189 LEAQAYADLLEEENIITP---AWFAFNSKDGTNVVSGDSIEECGSIAESC-----DKVVA 240
Query: 487 IGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTED--EYSILHY 542
+G++C P + L+ +K+ + P V +YPN G +D + +W + + Y
Sbjct: 241 VGISCTPPRFIHDLIHLLKKVTAKPVV---IYPNSGETYDGIRKEWGQNSGVTDGDFVSY 297
Query: 543 VPQWLEEGVNIIGGCCEVTSYEIQQM 568
V +W E G +I+GGCC I+ +
Sbjct: 298 VDKWCESGASIVGGCCRTAPDTIRGI 323
>gi|379753791|ref|YP_005342463.1| homocysteine methyltransferase [Mycobacterium intracellulare
MOTT-02]
gi|378804007|gb|AFC48142.1| homocysteine methyltransferase [Mycobacterium intracellulare
MOTT-02]
Length = 308
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 127/260 (48%), Gaps = 28/260 (10%)
Query: 9 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG +++ H + D LWS+ L P V H + RAGA I ++ YQA
Sbjct: 15 VLDGGLATELEARGHDLSDR----LWSARLLADAPREIVAVHAAYFRAGATIATTASYQA 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G +E LL +SV+L +A+D+ + AAS+GP
Sbjct: 71 SFEGFAARGLDRRETDLLLRRSVELAKAARDEAGAA--------------GLLVAASVGP 116
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y ++ L WHRP +E L AG D LA ET+P EA ALV +
Sbjct: 117 YGAALADGSEYRGRY--GLSVGALARWHRPRLETLADAGADVLACETVPDVDEAEALVDV 174
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R G AWLS++ D T G+ ++ A + A D+I A+GVNC P V +
Sbjct: 175 VRSV-GMPAWLSYTI-DGARTRAGQPLTEAFA--VAAGVDEIVAVGVNCCAPDDVLPAIA 230
Query: 247 CIKQSHPTVQTIVYPNKGVK 266
+ V IVYPN G +
Sbjct: 231 SASEIGKPV--IVYPNSGER 248
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 142/307 (46%), Gaps = 30/307 (9%)
Query: 264 GVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
G +LDG +++ H + D LWS+ L P V H + R A+I
Sbjct: 12 GTVVLDGGLATELEARGHDLSDR----LWSARLLADAPREIVAVHAAYFR----AGATIA 63
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
+ ++ +D E DL+ R +VE L +A D + AAS+G
Sbjct: 64 TTASYQASFEGFAARGLDRR-ETDLL--LRRSVE-LAKAARDEAG----AAGLLVAASVG 115
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG L DGSEY G Y ++ L WHRP +E L AG D LA ET+P EA ALV
Sbjct: 116 PYGAALADGSEYRGRY--GLSVGALARWHRPRLETLADAGADVLACETVPDVDEAEALVD 173
Query: 442 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
++R G AWLS++ D T G+ ++ A + A D+I A+GVNC P V +
Sbjct: 174 VVRSV-GMPAWLSYTI-DGARTRAGQPLTEAFA--VAAGVDEIVAVGVNCCAPDDVLPAI 229
Query: 502 RCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVT 561
+ V IVYPN G WD W+ + L QW+ G I+GGCC V
Sbjct: 230 ASASEIGKPV--IVYPNSGERWDG--RAWVGPRTFATGL--AAQWVSAGARIVGGCCRVG 283
Query: 562 SYEIQQM 568
+I ++
Sbjct: 284 PVDIAEL 290
>gi|449875690|ref|ZP_21782362.1| homocysteine methyltransferase [Streptococcus mutans S1B]
gi|449892495|ref|ZP_21788499.1| homocysteine methyltransferase [Streptococcus mutans SF12]
gi|449975504|ref|ZP_21815818.1| homocysteine methyltransferase [Streptococcus mutans 11VS1]
gi|449984428|ref|ZP_21819055.1| homocysteine methyltransferase [Streptococcus mutans NFSM2]
gi|449989539|ref|ZP_21821119.1| homocysteine methyltransferase [Streptococcus mutans NVAB]
gi|450011043|ref|ZP_21828969.1| homocysteine methyltransferase [Streptococcus mutans A19]
gi|450023363|ref|ZP_21830560.1| homocysteine methyltransferase [Streptococcus mutans U138]
gi|450080961|ref|ZP_21851406.1| homocysteine methyltransferase [Streptococcus mutans N66]
gi|450121402|ref|ZP_21866301.1| homocysteine methyltransferase [Streptococcus mutans ST6]
gi|449176821|gb|EMB79148.1| homocysteine methyltransferase [Streptococcus mutans 11VS1]
gi|449180227|gb|EMB82395.1| homocysteine methyltransferase [Streptococcus mutans NFSM2]
gi|449182501|gb|EMB84525.1| homocysteine methyltransferase [Streptococcus mutans NVAB]
gi|449189826|gb|EMB91454.1| homocysteine methyltransferase [Streptococcus mutans A19]
gi|449193459|gb|EMB94841.1| homocysteine methyltransferase [Streptococcus mutans U138]
gi|449215722|gb|EMC15901.1| homocysteine methyltransferase [Streptococcus mutans N66]
gi|449229267|gb|EMC28591.1| homocysteine methyltransferase [Streptococcus mutans ST6]
gi|449253653|gb|EMC51599.1| homocysteine methyltransferase [Streptococcus mutans S1B]
gi|449256116|gb|EMC53950.1| homocysteine methyltransferase [Streptococcus mutans SF12]
Length = 316
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 136/249 (54%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P H ++R+G+DI+ +S YQA+ L G S++EA +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV G D LALETIP EA ALV+LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ + P V YP
Sbjct: 204 GTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKVADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 137/300 (45%), Gaps = 33/300 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS-------IGPYGTVLRDGSEY 333
DV G LWS+ YL P H ++R I T +S + YG + +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 334 SGHYVDSMTEADLIAWHR-PNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSE 392
V A W E VR P IS +GPY L DGSE
Sbjct: 89 IALTVSLAKNAREKVWQELSEKEKQVRP--------YPLIS----GDVGPYAAYLADGSE 136
Query: 393 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKA 451
Y+G+Y + + L +HR ++ LV G D LALETIP EA ALV+LL+ EFP +A
Sbjct: 137 YTGNY-GQLDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEA 195
Query: 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHP 509
++SF+ ++ T S G I L+ QI A+G+NC PS S+L++ + P
Sbjct: 196 YMSFTAQNGTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKVADITDKP 253
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
V YPN G V+D H W + D +++L W G ++GGCC +I+ +
Sbjct: 254 LV---TYPNSGEVYDGQHQMWTQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPNDIESL 310
>gi|450158619|ref|ZP_21878935.1| homocysteine methyltransferase [Streptococcus mutans 66-2A]
gi|449242117|gb|EMC40720.1| homocysteine methyltransferase [Streptococcus mutans 66-2A]
Length = 316
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 136/249 (54%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P H ++R+G+DI+ +S YQA+ L G S++EA +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV G D LALETIP EA ALV+LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ + P V YP
Sbjct: 204 GTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKVADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 137/300 (45%), Gaps = 33/300 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS-------IGPYGTVLRDGSEY 333
DV G LWS+ YL P H ++R I T +S + YG + +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 334 SGHYVDSMTEADLIAWHR-PNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSE 392
V A W E VR P IS +GPY L DGSE
Sbjct: 89 IALTVSLAKNAREKVWQELSEKEKQVRP--------YPLIS----GDVGPYAAYLADGSE 136
Query: 393 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKA 451
Y+G+Y + + L +HR ++ LV G D LALETIP EA ALV+LL+ EFP +A
Sbjct: 137 YTGNY-GQLDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEA 195
Query: 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHP 509
++SF+ ++ T S G I L+ QI A+G+NC PS S+L++ + P
Sbjct: 196 YMSFTAQNGTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKVADITDKP 253
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
V YPN G V+D H W + D +++L W G ++GGCC +I+ +
Sbjct: 254 LV---TYPNSGEVYDGQHQMWTQSADISHTLLENTKIWHTFGAKVVGGCCRTRPNDIESL 310
>gi|308180236|ref|YP_003924364.1| homocysteine methyltransferase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|308045727|gb|ADN98270.1| homocysteine methyltransferase [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 309
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 146/308 (47%), Gaps = 26/308 (8%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
N+G + DG+ +++ + + LWS+ + P+A H+ ++
Sbjct: 9 NRGPVVSDGAMATELEKRGV--ATNSALWSATAMLDHPDAIQAVHQSYLDA--------- 57
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPS---ISSQTAA 378
G + + Y + V + +A + A L++ V + + + A
Sbjct: 58 --GAKIMTTNTYQAN-VPAFEQAGIAA---AQARQLIQQAVTIAHTARDASHVTDAVIAG 111
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
SIGPYG L DGSEY+G Y +T + +HR + ++ AGVD LALET+P E A
Sbjct: 112 SIGPYGAYLADGSEYTGAY--QLTPSAYQDFHRERLALIMAAGVDVLALETMPRLDEVQA 169
Query: 439 LVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
LV+L+ +P Q W+SFS KD G S A T+ +A + A+GVNC ++
Sbjct: 170 LVQLITTTWPQQPYWVSFSIKDPQTLCDGT--SLAATAKWVAAQPNVVAVGVNCTTLENI 227
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
+ + +K + V IVYPN G +D V W +T + +VPQWL G IIGGC
Sbjct: 228 APALATLKAAV-AVPLIVYPNSGDQYDPVTKTWQETHLSHQFASFVPQWLAAGARIIGGC 286
Query: 558 CEVTSYEI 565
C T +I
Sbjct: 287 CRTTPKDI 294
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 132/255 (51%), Gaps = 22/255 (8%)
Query: 11 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDN 70
DG+ +++ + + LWS+ + P+A H+ ++ AGA I+ ++ YQANV
Sbjct: 16 DGAMATELEKRGV--ATNSALWSATAMLDHPDAIQAVHQSYLDAGAKIMTTNTYQANVPA 73
Query: 71 LTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
+ G + +A L+ ++V + ++A+D + T + A SIGPYG
Sbjct: 74 FEQAGIAAAQARQLIQQAVTIAHTARDASHVTDAV--------------IAGSIGPYGAY 119
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-RE 189
L DGSEY+G Y +T + +HR + ++ AGVD LALET+P E ALV+L+
Sbjct: 120 LADGSEYTGAY--QLTPSAYQDFHRERLALIMAAGVDVLALETMPRLDEVQALVQLITTT 177
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 249
+P Q W+SFS KD G S A T+ +A + A+GVNC +++ + +K
Sbjct: 178 WPQQPYWVSFSIKDPQTLCDGT--SLAATAKWVAAQPNVVAVGVNCTTLENIAPALATLK 235
Query: 250 QSHPTVQTIVYPNKG 264
+ V IVYPN G
Sbjct: 236 AAV-AVPLIVYPNSG 249
>gi|348171479|ref|ZP_08878373.1| homocysteine methyltransferase [Saccharopolyspora spinosa NRRL
18395]
Length = 299
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 131/260 (50%), Gaps = 31/260 (11%)
Query: 9 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG +++ H + D LWS+ L PE V H F RAGA+I ++ YQA
Sbjct: 12 ILDGGLATELEAQGHDLSDA----LWSARLLADAPEEIVAAHAAFFRAGAEIATTASYQA 67
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + + G EA L+ +SV+L A + E H AASIGP
Sbjct: 68 SFEGFAERGIERAEAAKLMRRSVELARLAGEVEPGR--------------HRWVAASIGP 113
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L DGSEY G Y +T+ +L +HRP +E L + D ALET+P EA ALV
Sbjct: 114 YGAMLADGSEYRGRY--GLTKRELHDFHRPRLEVLAESRPDIFALETVPDIDEAEALVDA 171
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+ + AWLSF+ + T G+ ++ A + A+ D I A+GVNC P V T
Sbjct: 172 VADL-DVPAWLSFTISGE-QTRAGQPLAEAF--AVAADSDAIIAVGVNCSAPDDVLT--- 224
Query: 247 CIKQSHPTVQT--IVYPNKG 264
I+ + TV+ +VYPN G
Sbjct: 225 AIEIASATVEKPIVVYPNSG 244
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 139/303 (45%), Gaps = 31/303 (10%)
Query: 267 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+LDG +++ H + D LWS+ L PE V H F R E A
Sbjct: 12 ILDGGLATELEAQGHDLSDA----LWSARLLADAPEEIVAAHAAFFRAGAEIA------- 60
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
T + + G + A+ R +VE AG ++P AASIGPYG
Sbjct: 61 TTASYQASFEGFAERGIERAEAAKLMRRSVELARLAGE-----VEPGRHRWVAASIGPYG 115
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
+L DGSEY G Y +T+ +L +HRP +E L + D ALET+P EA ALV +
Sbjct: 116 AMLADGSEYRGRY--GLTKRELHDFHRPRLEVLAESRPDIFALETVPDIDEAEALVDAVA 173
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 504
+ AWLSF+ + T G+ ++ A + A+ D I A+GVNC P V T I
Sbjct: 174 DL-DVPAWLSFTISGE-QTRAGQPLAEAF--AVAADSDAIIAVGVNCSAPDDVLT---AI 226
Query: 505 KQSHPTVQT--IVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTS 562
+ + TV+ +VYPN G WD+ W T W G ++IGGCC V
Sbjct: 227 EIASATVEKPIVVYPNSGEGWDAQRRAW--TGRARLSAEQARSWRAAGAHVIGGCCRVRP 284
Query: 563 YEI 565
+I
Sbjct: 285 EDI 287
>gi|291454931|ref|ZP_06594321.1| homocysteine methyltransferase [Streptomyces albus J1074]
gi|291357880|gb|EFE84782.1| homocysteine methyltransferase [Streptomyces albus J1074]
Length = 306
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 130/260 (50%), Gaps = 20/260 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ ++DG + Q++ D LWS+ L PE V HR + AGA++ ++ YQ
Sbjct: 14 RAVVVDGGLSEQLAARGNDLSD--ALWSARLLADAPEEVVAAHRAYYAAGAEVAITASYQ 71
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
A + + G A LL SV L A D+ + + TG + AAS G
Sbjct: 72 ATFEGFARRGVGRVAAARLLGDSVGLARRAADEAREADGV---------TGPLWVAASAG 122
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG +L DGSEY G Y ++ A+L +HRP +E L AG D LALET+P EA AL++
Sbjct: 123 PYGAMLADGSEYRGRY--GLSVAELERFHRPRLEVLAAAGPDVLALETVPDADEARALLR 180
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
+R G AWLS+S T G+ ++ A A ++ A+GVNC P V V
Sbjct: 181 AVRGL-GVPAWLSYSVAGG-RTRAGDRLADAFALAADA--PEVVAVGVNCCDPREVEPAV 236
Query: 246 RCIKQSHPTVQTIV-YPNKG 264
R +H T + +V YPN G
Sbjct: 237 RL--AAHVTGKPVVAYPNSG 254
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 142/305 (46%), Gaps = 24/305 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
++DG + Q++ D LWS+ L PE V HR + E A + T
Sbjct: 17 VVDGGLSEQLAARGNDLSD--ALWSARLLADAPEEVVAAHRAYYAAGAEVAITASYQATF 74
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--TAASIGPYG 384
++ V + A L+ + L R D A ++ AAS GPYG
Sbjct: 75 ----EGFARRGVGRVAAARLLG----DSVGLARRAADE-AREADGVTGPLWVAASAGPYG 125
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
+L DGSEY G Y ++ A+L +HRP +E L AG D LALET+P EA AL++ +R
Sbjct: 126 AMLADGSEYRGRY--GLSVAELERFHRPRLEVLAAAGPDVLALETVPDADEARALLRAVR 183
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 504
G AWLS+S T G+ ++ A A ++ A+GVNC P V VR
Sbjct: 184 GL-GVPAWLSYSVAGG-RTRAGDRLADAFALAADA--PEVVAVGVNCCDPREVEPAVRL- 238
Query: 505 KQSHPTVQTIV-YPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
+H T + +V YPN G WD+ W + L +W+ G ++GGCC V +
Sbjct: 239 -AAHVTGKPVVAYPNSGERWDAAARAWRGPAQPLAGL--AGEWVAAGARLVGGCCRVGAQ 295
Query: 564 EIQQM 568
++++
Sbjct: 296 AVREV 300
>gi|408829838|ref|ZP_11214728.1| homocysteine methyltransferase [Streptomyces somaliensis DSM 40738]
Length = 309
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 129/260 (49%), Gaps = 27/260 (10%)
Query: 9 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG ++Q+ + H + D LWS+ L +PEA V H + AGAD++ ++ YQA
Sbjct: 20 VLDGGLSNQLESAGHDLGD----DLWSARLLAEDPEALVAAHLAYYEAGADVVTTAGYQA 75
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G A +LL SV+ + + ++ + TAAS GP
Sbjct: 76 TFEGFARRGVGRARAAELLALSVE----------SVREAAVRARAAGVSRPLWTAASAGP 125
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L DGSEY G Y + A L A+HRP +EAL AG D LALET+P EA AL++
Sbjct: 126 YGAMLADGSEYRGRY--GLGTAALEAFHRPRLEALAAAGPDVLALETVPDADEARALLRA 183
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R G AWLS++ + G L + L A D+I A+GVNC P V V
Sbjct: 184 VRGL-GVPAWLSYTVAGGRTRAGGTLEEA---FGLAAEADEIVAVGVNCCAPEEVLPAVE 239
Query: 247 CIKQ--SHPTVQTIVYPNKG 264
+ P V YPN G
Sbjct: 240 TAARVSGKPVV---AYPNSG 256
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 142/312 (45%), Gaps = 28/312 (8%)
Query: 253 PTVQTIVYPNKGVKLLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFI 310
P + P+ + +LDG ++Q+ + H + D LWS+ L +PEA V H +
Sbjct: 7 PLTDVLASPSAAL-VLDGGLSNQLESAGHDLGD----DLWSARLLAEDPEALVAAHLAYY 61
Query: 311 RGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKP 370
+ + G T ++ V A+L+A +VE++ A
Sbjct: 62 EAGADVVTTAGYQATF----EGFARRGVGRARAAELLAL---SVESVREA-AVRARAAGV 113
Query: 371 SISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI 430
S TAAS GPYG +L DGSEY G Y + A L A+HRP +EAL AG D LALET+
Sbjct: 114 SRPLWTAASAGPYGAMLADGSEYRGRY--GLGTAALEAFHRPRLEALAAAGPDVLALETV 171
Query: 431 PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490
P EA AL++ +R G AWLS++ + G L + L A D+I A+GVN
Sbjct: 172 PDADEARALLRAVRGL-GVPAWLSYTVAGGRTRAGGTLEEA---FGLAAEADEIVAVGVN 227
Query: 491 CVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLE 548
C P V V + P V YPN G WD V W + +W
Sbjct: 228 CCAPEEVLPAVETAARVSGKPVV---AYPNSGETWDPVAGGWRGRSTFRA--DRAEEWRR 282
Query: 549 EGVNIIGGCCEV 560
G +IGGCC V
Sbjct: 283 AGARLIGGCCRV 294
>gi|420145926|ref|ZP_14653372.1| Homocysteine methyltransferase [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398402412|gb|EJN55757.1| Homocysteine methyltransferase [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 311
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 144/303 (47%), Gaps = 15/303 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ + + D + LWS+ L T+P A H + + A + T
Sbjct: 18 ILDGAMATELEKRGV-DTNSE-LWSARALLTDPNAVYAVHYSYFAAGADVAIT----NTY 71
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+ + + + LIA V+ +A DYL + A S+GPYG
Sbjct: 72 QANVPAFEKIGLTAAASKALIA---KAVQVAQQARTDYLVASDNARDLYVAGSVGPYGAY 128
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE- 445
L DGSEY+G Y + +H P + LV +GVD LA+ET P E A+V LL+E
Sbjct: 129 LADGSEYTGAY--QLDRKAYQVFHYPRIAQLVASGVDVLAIETQPNFAEIQAVVALLQEE 186
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 505
FP Q AW+S S KD G ++ VT L Q+ A+GVNC ++V+ +++ +
Sbjct: 187 FPQQAAWVSLSIKDAQTLCDGTPLAEVVT--YLNQQPQVVALGVNCTALTNVTAVLQTL- 243
Query: 506 QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
Q +VYPN G +D W ++ VP+W G +IGGCC T +I
Sbjct: 244 QPLTDKPLLVYPNSGEEYDPSDKTWHMQKNTPQFSELVPKWQATGAQLIGGCCRTTPGDI 303
Query: 566 QQM 568
+Q+
Sbjct: 304 KQI 306
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 143/285 (50%), Gaps = 17/285 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + + D + LWS+ L T+P A H + AGAD+ ++ YQANV
Sbjct: 18 ILDGAMATELEKRGV-DTNSE-LWSARALLTDPNAVYAVHYSYFAAGADVAITNTYQANV 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
K+G + + L+ K+VQ+ A+ D N + A S+GPYG
Sbjct: 76 PAFEKIGLTAAASKALIAKAVQVAQQARTDYLVASD-NARDLY--------VAGSVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY+G Y + +H P + LV +GVD LA+ET P E A+V LL+
Sbjct: 127 AYLADGSEYTGAY--QLDRKAYQVFHYPRIAQLVASGVDVLAIETQPNFAEIQAVVALLQ 184
Query: 189 -EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP Q AW+S S KD G ++ VT L Q+ A+GVNC ++V+ +++
Sbjct: 185 EEFPQQAAWVSLSIKDAQTLCDGTPLAEVVT--YLNQQPQVVALGVNCTALTNVTAVLQT 242
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSS 292
+ Q +VYPN G + T + ++T + + P W +
Sbjct: 243 L-QPLTDKPLLVYPNSGEEYDPSDKTWHMQKNTPQFSELVPKWQA 286
>gi|170783269|ref|YP_001711603.1| homocysteine methyltransferase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157839|emb|CAQ03045.1| homocysteine s-methyltransferase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 301
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 128/265 (48%), Gaps = 30/265 (11%)
Query: 9 LLDGSFTS--QVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG + + H + D PLWS+ L EP+A H ++ RAGAD+ ++ YQ
Sbjct: 13 VLDGGLGTLLEARGHDLSD----PLWSARVLADEPDAVRAAHAEYFRAGADVAITASYQV 68
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASI 124
+ G S E +LL SV+L A+D+ ++ P ++ AAS+
Sbjct: 69 GFEAFAARGLSAAETEELLRASVRLAAEARDEVAQDDAPGAGRDRWI---------AASV 119
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSEY+ +T A+L WH P L +G D LA ET+P+ E ALV
Sbjct: 120 GPYGATLGDGSEYAAS--SGLTRAELRRWHAPRFAVLADSGADLLACETVPSLDEGRALV 177
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN-PDQIQAIGVNCVRPSHVST 243
L R G AWL+F+ + S GE ++ LAN D+I A+G+NC P V
Sbjct: 178 DLARGS-GASAWLAFTVQGGRLRS-GEPMAEGFR---LANGADEIVAVGINCAHPEEVPA 232
Query: 244 LVRCIK--QSHPTVQTIVYPNKGVK 266
+ + P VYPN G +
Sbjct: 233 AIAAARGVTDRPVA---VYPNSGER 254
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 146/324 (45%), Gaps = 49/324 (15%)
Query: 261 PNKGVKLLDGSFTS--QVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
PN+ + +LDG + + H + D PLWS+ L EP+A H ++ R + A
Sbjct: 8 PNRPL-VLDGGLGTLLEARGHDLSD----PLWSARVLADEPDAVRAAHAEYFRAGADVAI 62
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--- 375
+ + Y + ++ L A E L+RA V A + ++
Sbjct: 63 T-----------ASYQVGF-EAFAARGLSA---AETEELLRASVRLAAEARDEVAQDDAP 107
Query: 376 -------TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE 428
AAS+GPYG L DGSEY+ +T A+L WH P L +G D LA E
Sbjct: 108 GAGRDRWIAASVGPYGATLGDGSEYAAS--SGLTRAELRRWHAPRFAVLADSGADLLACE 165
Query: 429 TIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN-PDQIQAI 487
T+P+ E ALV L R G AWL+F+ + S GE ++ LAN D+I A+
Sbjct: 166 TVPSLDEGRALVDLARGS-GASAWLAFTVQGGRLRS-GEPMAEGFR---LANGADEIVAV 220
Query: 488 GVNCVRPSHVSTLVRCIK--QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQ 545
G+NC P V + + P VYPN G WD+V W L V
Sbjct: 221 GINCAHPEEVPAAIAAARGVTDRPVA---VYPNSGERWDAVARAWGGD----PALPSVDA 273
Query: 546 WLEEGVNIIGGCCEVTSYEIQQMR 569
W+ G +I+GGCC V EI++MR
Sbjct: 274 WIAAGASIVGGCCRVGPDEIRRMR 297
>gi|345002614|ref|YP_004805468.1| homocysteine S-methyltransferase [Streptomyces sp. SirexAA-E]
gi|344318240|gb|AEN12928.1| homocysteine S-methyltransferase [Streptomyces sp. SirexAA-E]
Length = 308
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 126/256 (49%), Gaps = 24/256 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG ++Q+ D LWS+ L P+ H ++RAGA ++ ++ YQA
Sbjct: 22 VLDGGLSNQLRAQGCDLSD--ALWSARLLADAPQQIEAAHAAYVRAGAQVLITASYQATF 79
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
D + G + A +L+ SV+L A + + + AAS+GPYG
Sbjct: 80 DGFERRGIGREGAAELMAGSVELARRAAGRSGR---------------EVWVAASVGPYG 124
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
+L DGSEY G Y +T +L +HRP +EAL A D LALET+P EA A++ +R
Sbjct: 125 AMLADGSEYRGRY--GLTVRELERFHRPRIEALAEAAPDALALETVPDTDEAEAMLGAVR 182
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
G WLS++ + T G+ ++ A L A DQ+ A+GVNC P+ V +
Sbjct: 183 GC-GLPVWLSYTVAGE-RTRAGQPLADAFA--LAAGEDQVVAVGVNCCDPADADRAVE-V 237
Query: 249 KQSHPTVQTIVYPNKG 264
+ +VYPN G
Sbjct: 238 AAAVTGKPVVVYPNSG 253
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 137/302 (45%), Gaps = 24/302 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG ++Q+ D LWS+ L P+ H ++R + + T
Sbjct: 22 VLDGGLSNQLRAQGCDLSD--ALWSARLLADAPQQIEAAHAAYVRAGAQVLITASYQATF 79
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
DG E G + A+L+A +VE RA + AAS+GPYG +
Sbjct: 80 --DGFERRG--IGREGAAELMA---GSVELARRAAG------RSGREVWVAASVGPYGAM 126
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y +T +L +HRP +EAL A D LALET+P EA A++ +R
Sbjct: 127 LADGSEYRGRY--GLTVRELERFHRPRIEALAEAAPDALALETVPDTDEAEAMLGAVRGC 184
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
G WLS++ + T G+ ++ A L A DQ+ A+GVNC P+ V +
Sbjct: 185 -GLPVWLSYTVAGE-RTRAGQPLADAFA--LAAGEDQVVAVGVNCCDPADADRAVE-VAA 239
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQ 566
+ +VYPN G +WD+ W + + W G ++GGCC V I
Sbjct: 240 AVTGKPVVVYPNSGEIWDAAARGWAG-QGTFDAAR-AGGWRRAGARLVGGCCRVGPSGIS 297
Query: 567 QM 568
+
Sbjct: 298 GL 299
>gi|380032189|ref|YP_004889180.1| homocysteine S-methyltransferase (cobalamin-dependent)
[Lactobacillus plantarum WCFS1]
gi|342241432|emb|CCC78666.1| homocysteine S-methyltransferase (cobalamin-dependent)
[Lactobacillus plantarum WCFS1]
Length = 309
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 149/321 (46%), Gaps = 52/321 (16%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
N+G + DG+ +++ + + LWS+ + P+A H+ ++ + A I
Sbjct: 9 NRGPVVSDGAMATELEKRGV--ATNSALWSATAMLDHPDAIQAVHQSYL----DAGAKIM 62
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA---LIKPSIS----- 373
T ++ NV A +AG+ + LI+ +++
Sbjct: 63 TTNT------------------------YQANVPAFEQAGIAAVQARQLIQQAVTIAHTA 98
Query: 374 --------SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL 425
+ A SIGPYG L DGSEY+G Y +T + +HR + ++ AGVD L
Sbjct: 99 RDASHVTDAVIAGSIGPYGAYLADGSEYTGAY--QLTPSAYQDFHRERLALIMAAGVDVL 156
Query: 426 ALETIPAEKEALALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 484
ALET+P E ALV+L+ +P Q W+SFS KD G S AV + +A +
Sbjct: 157 ALETMPRLDEVQALVQLITTTWPQQPYWVSFSIKDPQTLCDGT--SLAVAAKWVAAQPNV 214
Query: 485 QAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVP 544
A+GVNC +++ + +K + V IVYPN G +D V W +T + +VP
Sbjct: 215 VAVGVNCTTLENIAPALTTLKAAV-AVPLIVYPNSGDQYDPVTKTWQETHLSHQFASFVP 273
Query: 545 QWLEEGVNIIGGCCEVTSYEI 565
QWL G IIGGCC T +I
Sbjct: 274 QWLAAGARIIGGCCRTTPKDI 294
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 132/255 (51%), Gaps = 22/255 (8%)
Query: 11 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDN 70
DG+ +++ + + LWS+ + P+A H+ ++ AGA I+ ++ YQANV
Sbjct: 16 DGAMATELEKRGV--ATNSALWSATAMLDHPDAIQAVHQSYLDAGAKIMTTNTYQANVPA 73
Query: 71 LTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
+ G + +A L+ ++V + ++A+D + T + A SIGPYG
Sbjct: 74 FEQAGIAAVQARQLIQQAVTIAHTARDASHVTDAV--------------IAGSIGPYGAY 119
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-RE 189
L DGSEY+G Y +T + +HR + ++ AGVD LALET+P E ALV+L+
Sbjct: 120 LADGSEYTGAY--QLTPSAYQDFHRERLALIMAAGVDVLALETMPRLDEVQALVQLITTT 177
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 249
+P Q W+SFS KD G S AV + +A + A+GVNC +++ + +K
Sbjct: 178 WPQQPYWVSFSIKDPQTLCDGT--SLAVAAKWVAAQPNVVAVGVNCTTLENIAPALTTLK 235
Query: 250 QSHPTVQTIVYPNKG 264
+ V IVYPN G
Sbjct: 236 AAV-AVPLIVYPNSG 249
>gi|396482943|ref|XP_003841585.1| similar to homocysteine S-methyltransferase [Leptosphaeria maculans
JN3]
gi|312218160|emb|CBX98106.1| similar to homocysteine S-methyltransferase [Leptosphaeria maculans
JN3]
Length = 333
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 156/326 (47%), Gaps = 25/326 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ + + D+ G LWS+ L P + H D+ R + A + Y
Sbjct: 17 ILDGALATYLETLG-ADISGA-LWSADILLKNPSLIKQAHLDYYRAGAQIAIT-ASYQAS 73
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT---------A 377
L ++ G ++ E ++ R +V +A +Y+A + +T A
Sbjct: 74 LPGLVQHLGP--GTVGEDEVKEVVRTSVRLAQQARDEYVAERTREGAGETSTPPPQLWVA 131
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
S+GPYG L +GSEY G Y + + A+HR + ALV AG D LALETIP+++E +
Sbjct: 132 GSVGPYGAFLANGSEYRGDY--ELPIPAMQAFHRGRIAALVSAGADILALETIPSKQETI 189
Query: 438 ALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
AL+ LLR EFP KAW +F+ + G ++ V L + Q+ A+G NCV
Sbjct: 190 ALLDLLRHEFPTTKAWFTFTLAGPDAIADGTPLAELVP--LFRHEAQVLALGFNCVPDGV 247
Query: 497 VSTLVRCIK-----QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQWLEEG 550
V+ +K Q V T++YPN G +W++ +W + E +L +W G
Sbjct: 248 GLAAVKVLKTVLLEQGMARVGTVMYPNSGELWNARAREWEGSRTEGGLLGEKTREWYAAG 307
Query: 551 VNIIGGCCEVTSYEIQQMRIMIDEFN 576
+IGGCC T +I MR ++ F
Sbjct: 308 ARLIGGCCRTTPGDIGVMREALEGFR 333
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 136/277 (49%), Gaps = 38/277 (13%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ + + D+ G LWS+ L P + H D+ RAGA I ++ YQA++
Sbjct: 17 ILDGALATYLETLG-ADISGA-LWSADILLKNPSLIKQAHLDYYRAGAQIAITASYQASL 74
Query: 69 DNLTK-LG---YSEQEALDLLHKSVQLMNSAKDK-----------ENQTPDINLNKTFNL 113
L + LG E E +++ SV+L A+D+ E TP L
Sbjct: 75 PGLVQHLGPGTVGEDEVKEVVRTSVRLAQQARDEYVAERTREGAGETSTPPPQL------ 128
Query: 114 LTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 173
A S+GPYG L +GSEY G Y + + A+HR + ALV AG D LALET
Sbjct: 129 -----WVAGSVGPYGAFLANGSEYRGDY--ELPIPAMQAFHRGRIAALVSAGADILALET 181
Query: 174 IPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIG 232
IP+++E +AL+ LLR EFP KAW +F+ + G ++ V L + Q+ A+G
Sbjct: 182 IPSKQETIALLDLLRHEFPTTKAWFTFTLAGPDAIADGTPLAELVP--LFRHEAQVLALG 239
Query: 233 VNCVRPSHVSTLVRCIK-----QSHPTVQTIVYPNKG 264
NCV V+ +K Q V T++YPN G
Sbjct: 240 FNCVPDGVGLAAVKVLKTVLLEQGMARVGTVMYPNSG 276
>gi|387786255|ref|YP_006251351.1| homocysteine methyltransferase [Streptococcus mutans LJ23]
gi|379132656|dbj|BAL69408.1| homocysteine methyltransferase [Streptococcus mutans LJ23]
Length = 316
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 136/249 (54%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P H ++R+G+DI+ +S YQA+ L G S++EA +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV G D LALETIP EA ALV+LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ I P V YP
Sbjct: 204 GTTISDGTAIEEVAE--LIDKALQILALGINCSSPSVYSSLLKKIADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 137/300 (45%), Gaps = 33/300 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS-------IGPYGTVLRDGSEY 333
DV G LWS+ YL P H ++R I T +S + YG + +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 334 SGHYVDSMTEADLIAWHR-PNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSE 392
V A W E VR P IS +GPY L DGSE
Sbjct: 89 IALTVSLAKNAREKVWQELSEKEKQVRP--------YPLIS----GDVGPYAAYLADGSE 136
Query: 393 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKA 451
Y+G+Y + + L +HR ++ LV G D LALETIP EA ALV+LL+ EFP +A
Sbjct: 137 YTGNY-GQLDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEA 195
Query: 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHP 509
++SF+ ++ T S G I L+ QI A+G+NC PS S+L++ I P
Sbjct: 196 YMSFTAQNGTTISDGTAIEEVAE--LIDKALQILALGINCSSPSVYSSLLKKIADITDKP 253
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
V YPN G V+D H W + D +++L W G ++GGCC +I+ +
Sbjct: 254 LV---TYPNSGEVYDGQHQMWTQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPNDIESL 310
>gi|350272611|ref|YP_004883919.1| homocysteine S-methyltransferase [Oscillibacter valericigenes
Sjm18-20]
gi|348597453|dbj|BAL01414.1| homocysteine S-methyltransferase [Oscillibacter valericigenes
Sjm18-20]
Length = 319
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 137/256 (53%), Gaps = 15/256 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R + D LWS+ L PE HRD+ +GAD S+ YQA +
Sbjct: 15 ILDGAMATELERKGLDLNDS--LWSARVLAEHPEVIQAVHRDYFVSGADCSTSASYQATI 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
GY+ +EA +L+ +S+ L+ A+D+ + KT L + AA++GPYG
Sbjct: 73 PGFMASGYTRREAEELIARSMTLLLKARDEWWEE-----EKTSGRL--YPLAAAAVGPYG 125
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L +GSEY+G+Y S TE + A+H P ++ L +G + ALET+P EALA +L
Sbjct: 126 AYLANGSEYTGNY--SCTEKEYRAFHMPRLQILKDSGAEIFALETMPRLDEALACAGMLE 183
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E W+SF+ + S G + + + L P ++A+GVNC P+ V ++R
Sbjct: 184 ELDCDY-WVSFTFRSPRQISDGTSVEE-IAATLKGFP-HLKAVGVNCTPPAFVEGVIRNF 240
Query: 249 KQSHPTVQTIVYPNKG 264
+ + ++ VYPN+G
Sbjct: 241 R-ALTSLPICVYPNRG 255
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 155/312 (49%), Gaps = 17/312 (5%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
++ K + +LDG+ +++ R + D LWS+ L PE HRD+ + +
Sbjct: 7 IWKQKDLVILDGAMATELERKGLDLNDS--LWSARVLAEHPEVIQAVHRDYFVSGADCST 64
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPS--ISSQT 376
S T+ G SG+ E LIA ++ L++A ++ K S +
Sbjct: 65 SASYQATI--PGFMASGYTRREAEE--LIA---RSMTLLLKARDEWWEEEKTSGRLYPLA 117
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
AA++GPYG L +GSEY+G+Y S TE + A+H P ++ L +G + ALET+P EA
Sbjct: 118 AAAVGPYGAYLANGSEYTGNY--SCTEKEYRAFHMPRLQILKDSGAEIFALETMPRLDEA 175
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
LA +L E W+SF+ + S G + + + L P ++A+GVNC P+
Sbjct: 176 LACAGMLEELDCDY-WVSFTFRSPRQISDGTSVEE-IAATLKGFP-HLKAVGVNCTPPAF 232
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556
V ++R + + ++ VYPN+G ++D+V W + D + + +W G +IGG
Sbjct: 233 VEGVIRNFR-ALTSLPICVYPNRGEIYDAVTKTWNGSADGKTYGDWAQEWYRAGARVIGG 291
Query: 557 CCEVTSYEIQQM 568
CC +I+ +
Sbjct: 292 CCRTRPEDIRAI 303
>gi|239791618|dbj|BAH72253.1| ACYPI009247 [Acyrthosiphon pisum]
Length = 199
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 109/191 (57%), Gaps = 15/191 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKD-VDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
K+ LLDGSF S + + D V HPLW S + EA V+ HRD+IRAGA+ + ++ Y
Sbjct: 10 KMYLLDGSFISGILPYVEYDSVMKHPLWGSNLIFNNEEAVVKAHRDYIRAGAEFLTTNTY 69
Query: 65 QANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
QA+++ K L + ++ L+ KSV + A +E+ I + S
Sbjct: 70 QASIEGFQKYLNLNYDQSFQLIKKSVTICRRAIMEESSGRTIRI-------------MGS 116
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY+G+Y+ + DL WH+P ++ALV AGVD + ETIP+ EA L
Sbjct: 117 VGPYGASLCDGSEYNGNYIGKIDSKDLYDWHKPRIQALVEAGVDVVLFETIPSIIEANIL 176
Query: 184 VKLLREFPGQK 194
+ +L E+P +K
Sbjct: 177 LNILAEYPIKK 187
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 63/153 (41%), Gaps = 51/153 (33%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKD-VDGHPLWSSVYLTTEPEACVETHRDFIRGH------- 313
N + LLDGSF S + + D V HPLW S + EA V+ HRD+IR
Sbjct: 8 NMKMYLLDGSFISGILPYVEYDSVMKHPLWGSNLIFNNEEAVVKAHRDYIRAGAEFLTTN 67
Query: 314 -------------------------------------------IETAASIGPYGTVLRDG 330
I S+GPYG L DG
Sbjct: 68 TYQASIEGFQKYLNLNYDQSFQLIKKSVTICRRAIMEESSGRTIRIMGSVGPYGASLCDG 127
Query: 331 SEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 363
SEY+G+Y+ + DL WH+P ++ALV AGVD
Sbjct: 128 SEYNGNYIGKIDSKDLYDWHKPRIQALVEAGVD 160
>gi|258654689|ref|YP_003203845.1| homocysteine methyltransferase [Nakamurella multipartita DSM 44233]
gi|258557914|gb|ACV80856.1| homocysteine S-methyltransferase [Nakamurella multipartita DSM
44233]
Length = 320
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 124/260 (47%), Gaps = 24/260 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGH----PLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
+LDG + + H GH LWS+ L P A HR++ RAGA + ++ Y
Sbjct: 17 VLDGGLATLLEAH------GHDLTSALWSAQLLVQNPGAITAAHREYFRAGAQVAITASY 70
Query: 65 QANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
QA++ L +G EA L +SV L +A +N+ +G A S+
Sbjct: 71 QASLPGLAAIGLGRVEAEQALRRSVDLARTAAAD-------GVNEATAPGSGPRWVATSV 123
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSEY G Y +T L WHRP +E L AG D LA+ETIP E AL+
Sbjct: 124 GPYGAALADGSEYRGDY--GLTVRQLRDWHRPRLEILADAGGDVLAIETIPCAAEVEALL 181
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
++ AWLS +C+D T GE + + A DQ+ A+GVNCV S +
Sbjct: 182 TEIQALD-APAWLSLTCQDG-RTRAGERVDEVF--AMAAGVDQVIAVGVNCVE-SAEAAD 236
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
+ + +VYPN G
Sbjct: 237 LVAAAAENSGKPAVVYPNSG 256
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 131/316 (41%), Gaps = 44/316 (13%)
Query: 267 LLDGSFTSQVSRHTIKDVDGH----PLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
+LDG + + H GH LWS+ L P A HR++ R + A
Sbjct: 17 VLDGGLATLLEAH------GHDLTSALWSAQLLVQNPGAITAAHREYFRAGAQVA----- 65
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL----------ALIKPSI 372
+ Y S+ I R E +R VD A S
Sbjct: 66 ----------ITASYQASLPGLAAIGLGRVEAEQALRRSVDLARTAAADGVNEATAPGSG 115
Query: 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA 432
A S+GPYG L DGSEY G Y +T L WHRP +E L AG D LA+ETIP
Sbjct: 116 PRWVATSVGPYGAALADGSEYRGDY--GLTVRQLRDWHRPRLEILADAGGDVLAIETIPC 173
Query: 433 EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 492
E AL+ ++ AWLS +C+D T GE + + A DQ+ A+GVNCV
Sbjct: 174 AAEVEALLTEIQALD-APAWLSLTCQDG-RTRAGERVDEVF--AMAAGVDQVIAVGVNCV 229
Query: 493 RPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552
S + + + +VYPN G WD+ W + H W+ G
Sbjct: 230 E-SAEAADLVAAAAENSGKPAVVYPNSGEDWDAQARAWAG-RATFGPEHAA-VWVASGAR 286
Query: 553 IIGGCCEVTSYEIQQM 568
++GGCC V I+++
Sbjct: 287 LVGGCCRVGPQAIRRL 302
>gi|222150580|ref|YP_002559733.1| homocysteine methyltransferase [Macrococcus caseolyticus JCSC5402]
gi|222119702|dbj|BAH17037.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 295
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 144/285 (50%), Gaps = 28/285 (9%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ +LDG F + V + DV H LWSS + + PEA + H+ F+ +GA+II ++ YQA
Sbjct: 11 IVILDGGFGTTVEQFGY-DVK-HELWSSNLIQSNPEAVYKVHKAFVDSGAEIILTNTYQA 68
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+V + +G + A L +V+L A N+T A S+GP
Sbjct: 69 SVQSFLNIGIDKATACTYLATAVELATRAAS----------NRTI--------IAGSLGP 110
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L +GSEY+G Y + TEAD I +H+ ++ L+ AGV A ETIP +E A+ L
Sbjct: 111 YGAMLGNGSEYTGDYEE--TEADYIQYHKERLDILIEAGVSVFAFETIPNIEEIKAVRTL 168
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV- 245
L ++P +AW+S + KD H S G + + + ++ + + A GVNC + + V
Sbjct: 169 LLDYPHIEAWISVTLKDHDHLSDGTPLEAVIE--VVNEIENVLAFGVNCTSVNVIDAAVD 226
Query: 246 RCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLW 290
+ I S + I+YPN G + D + + V+ P W
Sbjct: 227 KLITLSDKPL--ILYPNSG-RQYDAVHKVWIDQEDASLVEAAPRW 268
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 146/349 (41%), Gaps = 114/349 (32%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIE--------- 315
+ +LDG F + V + DV H LWSS + + PEA + H+ F+ E
Sbjct: 11 IVILDGGFGTTVEQFGY-DVK-HELWSSNLIQSNPEAVYKVHKAFVDSGAEIILTNTYQA 68
Query: 316 -----------------------------------TAASIGPYGTVLRDGSEYSGHYVDS 340
A S+GPYG +L +GSEY+G Y +
Sbjct: 69 SVQSFLNIGIDKATACTYLATAVELATRAASNRTIIAGSLGPYGAMLGNGSEYTGDYEE- 127
Query: 341 MTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDS 400
TEAD I +H+ ++ L+ AGV S+ + T+
Sbjct: 128 -TEADYIQYHKERLDILIEAGV----------------SVFAFETI-------------- 156
Query: 401 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDD 460
PN+E E A+ LL ++P +AW+S + KD
Sbjct: 157 -----------PNIE-------------------EIKAVRTLLLDYPHIEAWISVTLKDH 186
Query: 461 THTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV-RCIKQSHPTVQTIVYPNK 519
H S G + + + ++ + + A GVNC + + V + I S + I+YPN
Sbjct: 187 DHLSDGTPLEAVIE--VVNEIENVLAFGVNCTSVNVIDAAVDKLITLSDKPL--ILYPNS 242
Query: 520 GGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
G +D+VH W+D ED S++ P+W E+GV IIGGCC+V EI+++
Sbjct: 243 GRQYDAVHKVWIDQEDA-SLVEAAPRWKEKGVKIIGGCCQVGPGEIKEL 290
>gi|449958284|ref|ZP_21809682.1| homocysteine methyltransferase [Streptococcus mutans 4VF1]
gi|450137207|ref|ZP_21871499.1| homocysteine methyltransferase [Streptococcus mutans NLML1]
gi|449170091|gb|EMB72824.1| homocysteine methyltransferase [Streptococcus mutans 4VF1]
gi|449235651|gb|EMC34600.1| homocysteine methyltransferase [Streptococcus mutans NLML1]
Length = 316
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 136/249 (54%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P H ++R+G+DI+ +S YQA+ L G S++EA +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV G + LALETIP EA ALV+LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSNLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ I P V YP
Sbjct: 204 GTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 137/300 (45%), Gaps = 33/300 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS-------IGPYGTVLRDGSEY 333
DV G LWS+ YL P H ++R I T +S + YG + +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 334 SGHYVDSMTEADLIAWHR-PNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSE 392
V A W E VR P IS +GPY L DGSE
Sbjct: 89 IALTVSLAKNAREKVWQELSEKEKQVRP--------YPLIS----GDVGPYAAYLADGSE 136
Query: 393 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKA 451
Y+G+Y + + L +HR ++ LV G + LALETIP EA ALV+LL+ EFP +A
Sbjct: 137 YTGNY-GQLDKEVLKDFHRSRIKILVDEGSNLLALETIPNFLEAQALVELLQEEFPSVEA 195
Query: 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHP 509
++SF+ ++ T S G I L+ QI A+G+NC PS S+L++ I P
Sbjct: 196 YMSFTAQNGTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKP 253
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
V YPN G V+D H W + D +++L W G ++GGCC +I+ +
Sbjct: 254 LV---TYPNSGEVYDGQHQMWTQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPNDIESL 310
>gi|333394374|ref|ZP_08476193.1| homocysteine methyltransferase [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
gi|336393079|ref|ZP_08574478.1| homocysteine methyltransferase [Lactobacillus coryniformis subsp.
torquens KCTC 3535]
Length = 305
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 143/303 (47%), Gaps = 15/303 (4%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ + + D + LWS+ L T+P A H + + A + T
Sbjct: 12 ILDGAMATELEKRGV-DTNSE-LWSARALLTDPNAVYAVHYSYFAAGADVAIT----NTY 65
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+ + + + LIA V+ +A DYL + A S+GPYG
Sbjct: 66 QANVPAFEKIGLTAAASKALIA---KAVQVAQQARTDYLVASDNARDLYVAGSVGPYGAY 122
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE- 445
L DGSEY+G Y + +H P + LV +GVD LA+ET P E A+V LL+E
Sbjct: 123 LADGSEYTGAY--QLDRKAYQVFHYPRIAQLVASGVDVLAIETQPNFAEIQAVVALLQEE 180
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 505
FP Q AW+S S KD G ++ VT L Q+ A+GVNC ++V+ ++ +
Sbjct: 181 FPQQTAWVSLSIKDAQTLCDGTPLAEVVT--YLNQQPQVVALGVNCTALTNVTAALQTL- 237
Query: 506 QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
Q +VYPN G +D W ++ VP+W G +IGGCC T +I
Sbjct: 238 QPLTDKPLLVYPNSGEEYDPSDKTWHMQKNTPQFSELVPKWQATGAQLIGGCCRTTPGDI 297
Query: 566 QQM 568
+Q+
Sbjct: 298 EQI 300
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 142/285 (49%), Gaps = 17/285 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + + D + LWS+ L T+P A H + AGAD+ ++ YQANV
Sbjct: 12 ILDGAMATELEKRGV-DTNSE-LWSARALLTDPNAVYAVHYSYFAAGADVAITNTYQANV 69
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
K+G + + L+ K+VQ+ A+ D N + A S+GPYG
Sbjct: 70 PAFEKIGLTAAASKALIAKAVQVAQQARTDYLVASD-NARDLY--------VAGSVGPYG 120
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY+G Y + +H P + LV +GVD LA+ET P E A+V LL+
Sbjct: 121 AYLADGSEYTGAY--QLDRKAYQVFHYPRIAQLVASGVDVLAIETQPNFAEIQAVVALLQ 178
Query: 189 -EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP Q AW+S S KD G ++ VT L Q+ A+GVNC ++V+ ++
Sbjct: 179 EEFPQQTAWVSLSIKDAQTLCDGTPLAEVVT--YLNQQPQVVALGVNCTALTNVTAALQT 236
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSS 292
+ Q +VYPN G + T + ++T + + P W +
Sbjct: 237 L-QPLTDKPLLVYPNSGEEYDPSDKTWHMQKNTPQFSELVPKWQA 280
>gi|77556462|gb|ABA99258.1| Homocysteine S-methyltransferase 3, putative, expressed [Oryza
sativa Japonica Group]
gi|215737069|dbj|BAG95998.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 304
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 132/248 (53%), Gaps = 21/248 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG +++ + D PLWS+ L + P + H D++ AGA+II ++ YQA +
Sbjct: 31 VMDGGLATELEANGADLND--PLWSAKCLLSSPHLVRKVHLDYLEAGANIIITASYQATI 88
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGH-IETAASI 124
G+S++++ DLL KSV++ A+D KE+ I H I AASI
Sbjct: 89 QGFESKGFSKEQSEDLLAKSVEIAREARDMFLKEHSDRPIQ----------HPILVAASI 138
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
G YG L DGSEYSG Y ++ T L +H+ +E L AG D +A ETIP + EA A V
Sbjct: 139 GSYGAYLADGSEYSGDYGEAGTLEFLKDFHKRRLEVLAEAGPDLIAFETIPNKLEAQAYV 198
Query: 185 KLLREFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIGVNCVRPSHVS 242
+LL E AW SF+ KD H G+ S + +AN ++ A+G+NC P +
Sbjct: 199 ELLDECNISIPAWFSFNSKDGVHIVSGD---SLIECATIANGCSKVGAVGINCTPPRFIH 255
Query: 243 TLVRCIKQ 250
L+ I++
Sbjct: 256 GLILSIRK 263
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 118/254 (46%), Gaps = 19/254 (7%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
V G ++DG +++ + D PLWS+ L + P + H D++
Sbjct: 23 VEAGGGRLVMDGGLATELEANGADLND--PLWSAKCLLSSPHLVRKVHLDYLEAGANIII 80
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--- 375
+ T+ G E G + +E DL+A +VE + R D Q
Sbjct: 81 TASYQATI--QGFESKG-FSKEQSE-DLLA---KSVE-IAREARDMFLKEHSDRPIQHPI 132
Query: 376 -TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 434
AASIG YG L DGSEYSG Y ++ T L +H+ +E L AG D +A ETIP +
Sbjct: 133 LVAASIGSYGAYLADGSEYSGDYGEAGTLEFLKDFHKRRLEVLAEAGPDLIAFETIPNKL 192
Query: 435 EALALVKLLREFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIGVNCV 492
EA A V+LL E AW SF+ KD H G+ S + +AN ++ A+G+NC
Sbjct: 193 EAQAYVELLDECNISIPAWFSFNSKDGVHIVSGD---SLIECATIANGCSKVGAVGINCT 249
Query: 493 RPSHVSTLVRCIKQ 506
P + L+ I++
Sbjct: 250 PPRFIHGLILSIRK 263
>gi|392948446|ref|ZP_10314056.1| homocysteine S-methyltransferase (cobalamin-dependent)
[Lactobacillus pentosus KCA1]
gi|392436428|gb|EIW14342.1| homocysteine S-methyltransferase (cobalamin-dependent)
[Lactobacillus pentosus KCA1]
Length = 304
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 151/321 (47%), Gaps = 52/321 (16%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
KG + DG+ +++ + + LWS+ + P A H+
Sbjct: 9 TKGPVVSDGAMATELEKRGVAT--NSALWSATAMLDHPAAIQSVHQS------------- 53
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGV---DYLALIKPSI------ 372
Y+D+ + ++ NV A +AG+ LI+ ++
Sbjct: 54 ---------------YLDAGAQIMTTNTYQANVPAFEQAGIPAEQARQLIQKAVTVAHDA 98
Query: 373 ---SSQTAA----SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL 425
SS TAA S+GPYG L DGSEY+G+Y ++ A A+H+ +E ++ AGVD L
Sbjct: 99 RDASSTTAAVIAGSVGPYGAYLADGSEYTGNY--QLSPAAYQAFHQERLELIIDAGVDVL 156
Query: 426 ALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 484
ALET+P E ALV L+ +P Q W+SFS +D G +++A + A P+ +
Sbjct: 157 ALETMPRLDEVQALVDLVTTRWPKQPYWVSFSIRDPQTLCDGTPLATAA-QWVAAQPNVV 215
Query: 485 QAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVP 544
A+GVNC ++ + ++ + T+ IVYPN G +D V W T+ + +VP
Sbjct: 216 -AVGVNCTALENIEPALATLRAAV-TIPLIVYPNSGDQYDPVTKTWQPTDLSHQFASFVP 273
Query: 545 QWLEEGVNIIGGCCEVTSYEI 565
+WL G IIGGCC T +I
Sbjct: 274 KWLAAGAQIIGGCCRTTPVDI 294
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 134/255 (52%), Gaps = 22/255 (8%)
Query: 11 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDN 70
DG+ +++ + + LWS+ + P A H+ ++ AGA I+ ++ YQANV
Sbjct: 16 DGAMATELEKRGVAT--NSALWSATAMLDHPAAIQSVHQSYLDAGAQIMTTNTYQANVPA 73
Query: 71 LTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
+ G ++A L+ K+V + + A+D + T + A S+GPYG
Sbjct: 74 FEQAGIPAEQARQLIQKAVTVAHDARDASSTTAAV--------------IAGSVGPYGAY 119
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-RE 189
L DGSEY+G+Y ++ A A+H+ +E ++ AGVD LALET+P E ALV L+
Sbjct: 120 LADGSEYTGNY--QLSPAAYQAFHQERLELIIDAGVDVLALETMPRLDEVQALVDLVTTR 177
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 249
+P Q W+SFS +D G +++A + A P+ + A+GVNC ++ + ++
Sbjct: 178 WPKQPYWVSFSIRDPQTLCDGTPLATAA-QWVAAQPN-VVAVGVNCTALENIEPALATLR 235
Query: 250 QSHPTVQTIVYPNKG 264
+ T+ IVYPN G
Sbjct: 236 AAV-TIPLIVYPNSG 249
>gi|448820840|ref|YP_007414002.1| Homocysteine S-methyltransferase (Cobalamin-dependent)
[Lactobacillus plantarum ZJ316]
gi|448274337|gb|AGE38856.1| Homocysteine S-methyltransferase (Cobalamin-dependent)
[Lactobacillus plantarum ZJ316]
Length = 309
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 146/308 (47%), Gaps = 26/308 (8%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
N+G + DG+ +++ + + LWS+ + P+A H+ ++
Sbjct: 9 NRGPVVSDGAMATELEKRGV--ATNSALWSATAMLDHPDAIQAVHQSYLDA--------- 57
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPS---ISSQTAA 378
G + + Y + V + +A + A L++ V + + ++ A
Sbjct: 58 --GAKIMTTNTYQAN-VPAFEQAGIAA---AQARQLIQQAVTIAHTARDASHVTNAVIAG 111
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
SIGPYG L DGSEY+G Y +T + +HR + ++ AGVD LALET+P E A
Sbjct: 112 SIGPYGAYLADGSEYTGAY--QLTLSAYQDFHRERLALIMAAGVDVLALETMPRLDEVQA 169
Query: 439 LVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
LV+L+ +P Q W+SFS KD G S AV + +A + A+GVNC ++
Sbjct: 170 LVQLITTTWPQQPYWVSFSIKDPQTLCDGT--SLAVAAKWVAAQPNVVAVGVNCTTLENI 227
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
+ + +K + V IVYPN G +D V W T + +VPQWL G IIGGC
Sbjct: 228 APALTTLKAAV-AVPLIVYPNSGDQYDPVTKTWQATHLSHQFASFVPQWLAAGARIIGGC 286
Query: 558 CEVTSYEI 565
C T +I
Sbjct: 287 CRTTPKDI 294
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 132/255 (51%), Gaps = 22/255 (8%)
Query: 11 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDN 70
DG+ +++ + + LWS+ + P+A H+ ++ AGA I+ ++ YQANV
Sbjct: 16 DGAMATELEKRGV--ATNSALWSATAMLDHPDAIQAVHQSYLDAGAKIMTTNTYQANVPA 73
Query: 71 LTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
+ G + +A L+ ++V + ++A+D + T + A SIGPYG
Sbjct: 74 FEQAGIAAAQARQLIQQAVTIAHTARDASHVTNAV--------------IAGSIGPYGAY 119
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-RE 189
L DGSEY+G Y +T + +HR + ++ AGVD LALET+P E ALV+L+
Sbjct: 120 LADGSEYTGAY--QLTLSAYQDFHRERLALIMAAGVDVLALETMPRLDEVQALVQLITTT 177
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 249
+P Q W+SFS KD G S AV + +A + A+GVNC +++ + +K
Sbjct: 178 WPQQPYWVSFSIKDPQTLCDGT--SLAVAAKWVAAQPNVVAVGVNCTTLENIAPALTTLK 235
Query: 250 QSHPTVQTIVYPNKG 264
+ V IVYPN G
Sbjct: 236 AAV-AVPLIVYPNSG 249
>gi|339637099|emb|CCC15976.1| homocysteine methyltransferase [Lactobacillus pentosus IG1]
Length = 304
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 108/190 (56%), Gaps = 6/190 (3%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A SIGPYG L DGSEY+G Y ++ A A+H+ +E ++ AGVD LALET+P E
Sbjct: 110 AGSIGPYGAYLADGSEYTGDY--QLSPAAYQAFHQERLELMIDAGVDVLALETMPRLDEV 167
Query: 437 LALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
ALV L+ +P Q W+SFS +D G +++A + A P+ + A+GVNC
Sbjct: 168 QALVDLVTTRWPDQPYWVSFSIRDPQRLCDGTSLATAA-QWVAAQPNVV-AVGVNCTALE 225
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
++ ++ ++ + T+ IVYPN G +D V W T+ + +VP+WL G IIG
Sbjct: 226 NIEPALKTLRAAV-TMPLIVYPNSGDQYDPVTKTWQPTDLSHQFASFVPKWLAAGAQIIG 284
Query: 556 GCCEVTSYEI 565
GCC T +I
Sbjct: 285 GCCRTTPADI 294
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 133/255 (52%), Gaps = 22/255 (8%)
Query: 11 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDN 70
DG+ +++ + + LWS+ + P A H+ ++ AGA I+ ++ YQANV
Sbjct: 16 DGAMATELEKRGV--ATNSALWSATAMLDHPAAIQAVHQSYLDAGAQIMTTNTYQANVPA 73
Query: 71 LTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
+ G ++A L+ K+V + + A+D T + A SIGPYG
Sbjct: 74 FEQAGIPAEQARQLIQKAVTVAHDARDASAATGAV--------------IAGSIGPYGAY 119
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-RE 189
L DGSEY+G Y ++ A A+H+ +E ++ AGVD LALET+P E ALV L+
Sbjct: 120 LADGSEYTGDY--QLSPAAYQAFHQERLELMIDAGVDVLALETMPRLDEVQALVDLVTTR 177
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 249
+P Q W+SFS +D G +++A + A P+ + A+GVNC ++ ++ ++
Sbjct: 178 WPDQPYWVSFSIRDPQRLCDGTSLATAA-QWVAAQPN-VVAVGVNCTALENIEPALKTLR 235
Query: 250 QSHPTVQTIVYPNKG 264
+ T+ IVYPN G
Sbjct: 236 AAV-TMPLIVYPNSG 249
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 317 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
A SIGPYG L DGSEY+G Y ++ A A+H+ +E ++ AGVD LAL
Sbjct: 110 AGSIGPYGAYLADGSEYTGDY--QLSPAAYQAFHQERLELMIDAGVDVLAL 158
>gi|334882852|emb|CCB83938.1| homocysteine S-methyltransferase [Lactobacillus pentosus MP-10]
Length = 304
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 108/190 (56%), Gaps = 6/190 (3%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A SIGPYG L DGSEY+G Y ++ A A+H+ +E ++ AGVD LALET+P E
Sbjct: 110 AGSIGPYGAYLADGSEYTGDY--QLSPAAYQAFHQERLELMIDAGVDVLALETMPRLDEV 167
Query: 437 LALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
ALV L+ ++P Q W+SFS +D G +++A + A P+ + A+GVNC
Sbjct: 168 QALVDLVTTQWPKQPYWVSFSIRDPQRLCDGTSLATAA-QWVAAQPNVV-AVGVNCTALE 225
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
++ + ++ + T+ IVYPN G +D V W T+ + +VP+WL G IIG
Sbjct: 226 NIEPALATLRAAV-TIPLIVYPNSGDQYDPVTKTWQPTDLSHQFASFVPKWLAAGAQIIG 284
Query: 556 GCCEVTSYEI 565
GCC T +I
Sbjct: 285 GCCRTTPADI 294
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 133/255 (52%), Gaps = 22/255 (8%)
Query: 11 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDN 70
DG+ +++ + ++ LWS+ + P A H+ ++ AGA I+ ++ YQ NV
Sbjct: 16 DGAMATELEKRGVET--NSALWSATAMLDHPAAIQAVHQSYLDAGAQIMTTNTYQTNVPA 73
Query: 71 LTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
+ G ++A L+ K+V + + A+D T + A SIGPYG
Sbjct: 74 FEQAGIPAEQARQLIQKAVTVAHDARDASAATGAV--------------IAGSIGPYGAY 119
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-RE 189
L DGSEY+G Y ++ A A+H+ +E ++ AGVD LALET+P E ALV L+ +
Sbjct: 120 LADGSEYTGDY--QLSPAAYQAFHQERLELMIDAGVDVLALETMPRLDEVQALVDLVTTQ 177
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 249
+P Q W+SFS +D G +++A + A P+ + A+GVNC ++ + ++
Sbjct: 178 WPKQPYWVSFSIRDPQRLCDGTSLATAA-QWVAAQPN-VVAVGVNCTALENIEPALATLR 235
Query: 250 QSHPTVQTIVYPNKG 264
+ T+ IVYPN G
Sbjct: 236 AAV-TIPLIVYPNSG 249
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 317 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
A SIGPYG L DGSEY+G Y ++ A A+H+ +E ++ AGVD LAL
Sbjct: 110 AGSIGPYGAYLADGSEYTGDY--QLSPAAYQAFHQERLELMIDAGVDVLAL 158
>gi|449919499|ref|ZP_21797991.1| homocysteine methyltransferase [Streptococcus mutans 1SM1]
gi|449159410|gb|EMB62752.1| homocysteine methyltransferase [Streptococcus mutans 1SM1]
Length = 316
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 135/249 (54%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P H ++R+G+DI+ +S YQA+ L G S++E +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEETEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV G D LALETIP EA ALV+LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ I P V YP
Sbjct: 204 GTTISDGTGIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 137/300 (45%), Gaps = 33/300 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS-------IGPYGTVLRDGSEY 333
DV G LWS+ YL P H ++R I T +S + YG + +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEETEKM 88
Query: 334 SGHYVDSMTEADLIAWHR-PNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSE 392
V A W E VR P IS +GPY L DGSE
Sbjct: 89 IALTVSLAKNAREKVWQELSEKEKQVRP--------YPLIS----GDVGPYAAYLADGSE 136
Query: 393 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKA 451
Y+G+Y + + L +HR ++ LV G D LALETIP EA ALV+LL+ EFP +A
Sbjct: 137 YTGNY-GQLDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEA 195
Query: 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHP 509
++SF+ ++ T S G I L+ QI A+G+NC PS S+L++ I P
Sbjct: 196 YMSFTAQNGTTISDGTGIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKP 253
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
V YPN G V+D H W + D +++L W G ++GGCC +I+ +
Sbjct: 254 LV---TYPNSGEVYDGQHQMWTQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPNDIESL 310
>gi|429200514|ref|ZP_19192200.1| homocysteine S-methyltransferase [Streptomyces ipomoeae 91-03]
gi|428663781|gb|EKX63118.1| homocysteine S-methyltransferase [Streptomyces ipomoeae 91-03]
Length = 309
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/275 (36%), Positives = 137/275 (49%), Gaps = 24/275 (8%)
Query: 9 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG ++Q+ + H + D LWS+ L +PEA E H + AGAD+ +S YQA
Sbjct: 22 VLDGGMSNQLESAGHDLSD----ELWSARLLAEQPEAITEAHLAYYLAGADVAITSSYQA 77
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ K G ++A +LL SV+L A D Q + + + AAS+GP
Sbjct: 78 TFEGFAKRGIEREKAAELLALSVEL---ALDATEQAWAKGVTRPLYV-------AASVGP 127
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L DGSEY G Y ++ A+L A+HRP +E L G D LALETIP EA AL++
Sbjct: 128 YGAMLADGSEYRGRY--GLSVAELEAFHRPRLEVLAAVGPDALALETIPDTDEAEALLRA 185
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R G WLS+S D T G+ L A +++ A+GVNC P V V
Sbjct: 186 VRGL-GVPVWLSYSIAAD-RTRAGQ--PLEEAFALAAEAEEVIAVGVNCCSPEDVDGAVE 241
Query: 247 CIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTI 281
I +VYPN G + D S + R T
Sbjct: 242 -IAARVTGKPPVVYPNSG-EAWDASARAWTGRSTF 274
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 143/311 (45%), Gaps = 27/311 (8%)
Query: 267 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+LDG ++Q+ + H + D LWS+ L +PEA E H + + A +
Sbjct: 22 VLDGGMSNQLESAGHDLSD----ELWSARLLAEQPEAITEAHLAYYLAGADVAITSSYQA 77
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA--LIKPSISSQTAASIGP 382
T ++ ++ A+L+A +VE + A A + +P AAS+GP
Sbjct: 78 TF----EGFAKRGIEREKAAELLAL---SVELALDATEQAWAKGVTRPLY---VAASVGP 127
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG +L DGSEY G Y ++ A+L A+HRP +E L G D LALETIP EA AL++
Sbjct: 128 YGAMLADGSEYRGRY--GLSVAELEAFHRPRLEVLAAVGPDALALETIPDTDEAEALLRA 185
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
+R G WLS+S D T G+ L A +++ A+GVNC P V V
Sbjct: 186 VRGL-GVPVWLSYSIAAD-RTRAGQ--PLEEAFALAAEAEEVIAVGVNCCSPEDVDGAVE 241
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTS 562
I +VYPN G WD+ W T V W G +IGGCC V
Sbjct: 242 -IAARVTGKPPVVYPNSGEAWDASARAW--TGRSTFTAEQVEGWRAAGARLIGGCCRVGP 298
Query: 563 YEIQQMRIMID 573
I + ++
Sbjct: 299 EAISAIATTLN 309
>gi|354614908|ref|ZP_09032733.1| Homocysteine S-methyltransferase [Saccharomonospora paurometabolica
YIM 90007]
gi|353220737|gb|EHB85150.1| Homocysteine S-methyltransferase [Saccharomonospora paurometabolica
YIM 90007]
Length = 310
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 128/262 (48%), Gaps = 30/262 (11%)
Query: 7 VKLLDGSFTS--QVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
V +LDG S + H + D LWS+ L PE V HR F RAGA + ++ Y
Sbjct: 20 VTVLDGGLASALEARGHELTDA----LWSARLLLDAPEEIVAAHRAFYRAGARVATTASY 75
Query: 65 QANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
QA+ D L G E+ +L +SV L + A+ ++ + AAS+
Sbjct: 76 QASFDRLAAYGLDRHESARVLRRSVDLAHEARATAAAASELWV-------------AASV 122
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSE+ G Y + L WHRP +E L AG D LALET+P EA ALV
Sbjct: 123 GPYGAALADGSEFHGRY--GVGVPALRRWHRPRIEVLAEAGPDVLALETVPDVDEAEALV 180
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
+ + E G AWL+F+ D T G+ ++ A A ++ A+GVNC P+ V
Sbjct: 181 RAV-EGVGLPAWLTFNV-DGGRTRAGQPMAEAFAVAADAP--EVVAVGVNCCAPAEVPDA 236
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
V C ++ P V YPN G
Sbjct: 237 VACAREVTGKPVV---AYPNSG 255
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 140/312 (44%), Gaps = 38/312 (12%)
Query: 265 VKLLDGSFTS--QVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
V +LDG S + H + D LWS+ L PE V HR F R A +
Sbjct: 20 VTVLDGGLASALEARGHELTDA----LWSARLLLDAPEEIVAAHRAFYRAGARVATT--- 72
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT----AA 378
+ Y + D + L R ++R VD + + ++ + AA
Sbjct: 73 --------ASYQASF-DRLAAYGL---DRHESARVLRRSVDLAHEARATAAAASELWVAA 120
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG L DGSE+ G Y + L WHRP +E L AG D LALET+P EA A
Sbjct: 121 SVGPYGAALADGSEFHGRY--GVGVPALRRWHRPRIEVLAEAGPDVLALETVPDVDEAEA 178
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
LV+ + E G AWL+F+ D T G+ ++ A A ++ A+GVNC P+ V
Sbjct: 179 LVRAV-EGVGLPAWLTFNV-DGGRTRAGQPMAEAFAVAADAP--EVVAVGVNCCAPAEVP 234
Query: 499 TLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556
V C ++ P V YPN G WD+ W T P WL G ++GG
Sbjct: 235 DAVACAREVTGKPVV---AYPNSGEGWDAHRRDW--TGPTRYRATDAPTWLAAGATLLGG 289
Query: 557 CCEVTSYEIQQM 568
CC V +I ++
Sbjct: 290 CCRVLPTDIARL 301
>gi|357402230|ref|YP_004914155.1| Homocysteine S-methyltransferase 4 [Streptomyces cattleya NRRL 8057
= DSM 46488]
gi|386358303|ref|YP_006056549.1| homocysteine methyltransferase [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337768639|emb|CCB77352.1| Homocysteine S-methyltransferase 4 [Streptomyces cattleya NRRL 8057
= DSM 46488]
gi|365808811|gb|AEW97027.1| homocysteine methyltransferase [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 302
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 127/260 (48%), Gaps = 29/260 (11%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG ++Q++ D LWS+ L PE H ++RAGA ++ +S YQA
Sbjct: 16 VLDGGLSNQLADQGCDLSDA--LWSARLLADAPEQIEAAHAAYLRAGARVLITSSYQATY 73
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ + G + A +LL +SV+L A + + AAS+GPYG
Sbjct: 74 EGFARRGLERRAAGELLRRSVRLARRAAGGRD----------------DVWVAASVGPYG 117
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
+L DGSEY G Y ++ A+L +HRP +E L A D LALET+P EA AL++ +
Sbjct: 118 AMLADGSEYRGRY--GLSVAELTRFHRPRIETLAEAAPDVLALETVPDADEAEALLRAV- 174
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E G WLS++ D T G+ ++ A L A Q+ A+GVNC V
Sbjct: 175 EGTGVPVWLSYTVAGD-RTRAGQPLADAFA--LAAGVPQVIAVGVNCCSAEDAGPAVALA 231
Query: 249 KQ--SHPTVQTIVYPNKGVK 266
+Q P V VYPN G +
Sbjct: 232 RQVTGKPVV---VYPNSGER 248
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 137/316 (43%), Gaps = 47/316 (14%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIE---TAASI 320
G +LDG ++Q++ D LWS+ L PE H ++R T++
Sbjct: 13 GPVVLDGGLSNQLADQGCDLSDA--LWSARLLADAPEQIEAAHAAYLRAGARVLITSSYQ 70
Query: 321 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ----T 376
Y R G E R E L R+ + L + + +
Sbjct: 71 ATYEGFARRGLE-----------------RRAAGELLRRS----VRLARRAAGGRDDVWV 109
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
AAS+GPYG +L DGSEY G Y ++ A+L +HRP +E L A D LALET+P EA
Sbjct: 110 AASVGPYGAMLADGSEYRGRY--GLSVAELTRFHRPRIETLAEAAPDVLALETVPDADEA 167
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
AL++ + E G WLS++ D T G+ ++ A L A Q+ A+GVNC
Sbjct: 168 EALLRAV-EGTGVPVWLSYTVAGD-RTRAGQPLADAFA--LAAGVPQVIAVGVNCCSAED 223
Query: 497 VSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLD--TEDEYSILHYVPQWLEEGVN 552
V +Q P V VYPN G WD+ W T D V W G
Sbjct: 224 AGPAVALARQVTGKPVV---VYPNSGERWDAEARAWRGGATFDP----SRVEGWTAAGAR 276
Query: 553 IIGGCCEVTSYEIQQM 568
+IGGCC V I ++
Sbjct: 277 LIGGCCRVGPRRIAEL 292
>gi|423336298|ref|ZP_17314046.1| homocysteine S-methyltransferase [Lactobacillus reuteri ATCC 53608]
gi|337729498|emb|CCC04628.1| homocysteine S-methyltransferase [Lactobacillus reuteri ATCC 53608]
Length = 310
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 156/314 (49%), Gaps = 21/314 (6%)
Query: 2 SKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQS 61
+++ K L+DG+ ++ + + + + LW++ L +P + H+++ +AGA + +
Sbjct: 6 AELTKPLLIDGAMSTALEQ--LGADTNNSLWTASVLANQPALVKKVHQEYFKAGARLAIT 63
Query: 62 SCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETA 121
YQANV K GYS+QEA L+ ++V L A+D+ Q I +N + G
Sbjct: 64 DTYQANVPAFIKNGYSKQEAHSLIQRAVALAKEARDEYQQETGI-----YNYVAG----- 113
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
++GPYG L +GSEY+G Y ++ + +HRP + ++ GVD +A+ET P E L
Sbjct: 114 -ALGPYGAYLANGSEYTGDY--HLSTVEYQQFHRPRLTDILTVGVDVIAIETQPRLDEVL 170
Query: 182 ALVKLLREF-PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 240
A + L++E P ++SFS KD T G + AV + +A + A+GVNC+
Sbjct: 171 AELDLVKELAPDTLCYVSFSLKDSTRLPDGTPL--AVAARTVAKYPNVFAVGVNCIPLEE 228
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKD-VDGHPLWSSVYLTTEP 299
V+ + + Q+ I YPN + D + + H + VD P W + LT
Sbjct: 229 VTAAIETVHQATDK-PVIAYPNSSA-IYDPTTKTWSYPHGGRGLVDYLPQWLAAGLTIVG 286
Query: 300 EACVETHRDFIRGH 313
C T +D H
Sbjct: 287 GCCTTTPQDIAALH 300
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 144/306 (47%), Gaps = 23/306 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
L+DG+ ++ + + + + LW++ L +P + H+++ + A + V
Sbjct: 13 LIDGAMSTALEQ--LGADTNNSLWTASVLANQPALVKKVHQEYFKAGARLAITDTYQANV 70
Query: 327 ---LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPY 383
+++G YS S+ + + AL + D + I + A ++GPY
Sbjct: 71 PAFIKNG--YSKQEAHSLIQRAV---------ALAKEARDEYQQ-ETGIYNYVAGALGPY 118
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L +GSEY+G Y S E +HRP + ++ GVD +A+ET P E LA + L+
Sbjct: 119 GAYLANGSEYTGDYHLSTVEYQ--QFHRPRLTDILTVGVDVIAIETQPRLDEVLAELDLV 176
Query: 444 REF-PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
+E P ++SFS KD T G + AV + +A + A+GVNC+ V+ +
Sbjct: 177 KELAPDTLCYVSFSLKDSTRLPDGTPL--AVAARTVAKYPNVFAVGVNCIPLEEVTAAIE 234
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTS 562
+ Q+ I YPN ++D W ++ Y+PQWL G+ I+GGCC T
Sbjct: 235 TVHQATDK-PVIAYPNSSAIYDPTTKTWSYPHGGRGLVDYLPQWLAAGLTIVGGCCTTTP 293
Query: 563 YEIQQM 568
+I +
Sbjct: 294 QDIAAL 299
>gi|397649632|ref|YP_006490159.1| homocysteine methyltransferase [Streptococcus mutans GS-5]
gi|449908173|ref|ZP_21793549.1| homocysteine methyltransferase [Streptococcus mutans OMZ175]
gi|449980042|ref|ZP_21816963.1| homocysteine methyltransferase [Streptococcus mutans 5SM3]
gi|450115795|ref|ZP_21864107.1| homocysteine methyltransferase [Streptococcus mutans ST1]
gi|450126600|ref|ZP_21868282.1| homocysteine methyltransferase [Streptococcus mutans U2A]
gi|392603201|gb|AFM81365.1| homocysteine methyltransferase [Streptococcus mutans GS-5]
gi|449177449|gb|EMB79750.1| homocysteine methyltransferase [Streptococcus mutans 5SM3]
gi|449227609|gb|EMC27021.1| homocysteine methyltransferase [Streptococcus mutans ST1]
gi|449231386|gb|EMC30575.1| homocysteine methyltransferase [Streptococcus mutans U2A]
gi|449263140|gb|EMC60573.1| homocysteine methyltransferase [Streptococcus mutans OMZ175]
Length = 316
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 135/249 (54%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P H ++R+G+DI+ +S YQA+ L G S++EA +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV D LALETIP EA ALV+LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ I P V YP
Sbjct: 204 GTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 136/300 (45%), Gaps = 33/300 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS-------IGPYGTVLRDGSEY 333
DV G LWS+ YL P H ++R I T +S + YG + +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 334 SGHYVDSMTEADLIAWHR-PNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSE 392
V A W E VR P IS +GPY L DGSE
Sbjct: 89 IALTVSLAKNAREKVWQELSEKEKQVRP--------YPLIS----GDVGPYAAYLADGSE 136
Query: 393 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKA 451
Y+G+Y + + L +HR ++ LV D LALETIP EA ALV+LL+ EFP +A
Sbjct: 137 YTGNY-GQLDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSVEA 195
Query: 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHP 509
++SF+ ++ T S G I L+ QI A+G+NC PS S+L++ I P
Sbjct: 196 YMSFTAQNGTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKP 253
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
V YPN G V+D H W + D +++L W G ++GGCC +I+ +
Sbjct: 254 LV---TYPNSGEVYDGQHQMWTQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPNDIESL 310
>gi|167860603|gb|ACA05081.1| homocysteine methyltransferase [Flammeovirga yaeyamensis]
Length = 242
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 134/246 (54%), Gaps = 21/246 (8%)
Query: 40 EPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKE 99
+ E H +++++GA+II SS YQA++ + G+S + A+DLL K+ ++ SAK+
Sbjct: 2 QEEVIKNAHLNYLKSGAEIIISSSYQASIKGFMEKGFSHEVAIDLLKKTTEIAQSAKE-- 59
Query: 100 NQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVE 159
+ +I+ + F A SIGPY L DGSEY G Y +++ E L ++H +
Sbjct: 60 -EYREISKREVF--------IAGSIGPYAAYLADGSEYKG-YDEAVDENTLRSFHNERLR 109
Query: 160 ALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTS 219
+ +D LA+ETIP+ +EA L L+ E G KAW SFSCK++ + G I V+
Sbjct: 110 IIDATDIDVLAVETIPSLEEAKVLNDLI-EKCGHKAWFSFSCKNEKQLNDGTDIIDIVS- 167
Query: 220 CLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGV------KLLDGSFT 273
LL + + + A+G+NC P ++ L+ I + + ++YPN G+ K L G+
Sbjct: 168 -LLKHNNNVMALGINCTHPKYILGLISEILNAGWKKKIVIYPNAGMVYNPDTKTLAGNLI 226
Query: 274 SQVSRH 279
S+ H
Sbjct: 227 SRRFPH 232
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 85/148 (57%), Gaps = 4/148 (2%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A SIGPY L DGSEY G Y +++ E L ++H + + +D LA+ETIP+ +EA
Sbjct: 72 AGSIGPYAAYLADGSEYKG-YDEAVDENTLRSFHNERLRIIDATDIDVLAVETIPSLEEA 130
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
L L+ E G KAW SFSCK++ + G I V+ LL + + + A+G+NC P +
Sbjct: 131 KVLNDLI-EKCGHKAWFSFSCKNEKQLNDGTDIIDIVS--LLKHNNNVMALGINCTHPKY 187
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWD 524
+ L+ I + + ++YPN G V++
Sbjct: 188 ILGLISEILNAGWKKKIVIYPNAGMVYN 215
>gi|449904146|ref|ZP_21792525.1| homocysteine methyltransferase [Streptococcus mutans M230]
gi|449963846|ref|ZP_21811017.1| homocysteine methyltransferase [Streptococcus mutans 15VF2]
gi|449173129|gb|EMB75721.1| homocysteine methyltransferase [Streptococcus mutans 15VF2]
gi|449259828|gb|EMC57345.1| homocysteine methyltransferase [Streptococcus mutans M230]
Length = 316
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 135/249 (54%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P H ++R+G+DI+ +S YQA+ L G S++EA +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV D LALETIP EA ALV+LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ I P V YP
Sbjct: 204 GTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 136/300 (45%), Gaps = 33/300 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS-------IGPYGTVLRDGSEY 333
DV G LWS+ YL P H ++R I T +S + YG + +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 334 SGHYVDSMTEADLIAWHR-PNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSE 392
V A W E VR P IS +GPY L DGSE
Sbjct: 89 IALTVSLAKNAREKVWQELSEKEKQVRP--------YPLIS----GDVGPYAAYLADGSE 136
Query: 393 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKA 451
Y+G+Y + + L +HR ++ LV D LALETIP EA ALV+LL+ EFP +A
Sbjct: 137 YTGNY-GQLDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSVEA 195
Query: 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHP 509
++SF+ ++ T S G I L+ QI A+G+NC PS S+L++ I P
Sbjct: 196 YMSFTAQNGTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKP 253
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
V YPN G V+D H W + D +++L W G ++GGCC +I+ +
Sbjct: 254 LV---TYPNSGEVYDGQHQMWTQSADISHTLLENTKIWHTFGAKVVGGCCRTRPNDIESL 310
>gi|357637374|ref|ZP_09135249.1| homocysteine S-methyltransferase [Streptococcus macacae NCTC 11558]
gi|357585828|gb|EHJ53031.1| homocysteine S-methyltransferase [Streptococcus macacae NCTC 11558]
Length = 323
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 134/251 (53%), Gaps = 19/251 (7%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL +P+ + H +++AG+DII SS YQA+V L G +EAL++
Sbjct: 30 DVSGK-LWSAKYLLKDPQLIQDIHETYLKAGSDIITSSSYQASVLGLCDYGLDYEEALNV 88
Query: 85 LHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV 142
+ +VQL A++ T + + L++G +GPY L DGSEYSG+Y
Sbjct: 89 IALTVQLAKKARENVWSTLTEKEKKARPYPLISG------DVGPYAAYLADGSEYSGNY- 141
Query: 143 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSC 201
S+++ L +HRP + LV D LALETIP E AL +LL+ EFP +A++SF+
Sbjct: 142 GSISKETLKDFHRPRLAVLVDEECDLLALETIPNYLEVQALSELLQEEFPAVEAYISFTA 201
Query: 202 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIV 259
+ S G I L+ QI A+G+NC P +L++ I P V
Sbjct: 202 QTKDSISDGTAIEKVAQ--LVDRSPQILALGINCSSPLIYKSLLQKIAAITEKPLV---T 256
Query: 260 YPNKGVKLLDG 270
YPN G ++ DG
Sbjct: 257 YPNSG-EIYDG 266
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 137/294 (46%), Gaps = 21/294 (7%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMT 342
DV G LWS+ YL +P+ + H +++ + S +VL +Y Y +++
Sbjct: 30 DVSGK-LWSAKYLLKDPQLIQDIHETYLKAGSDIITSSSYQASVL-GLCDYGLDYEEALN 87
Query: 343 ----EADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYV 398
L R NV + + + A P IS +GPY L DGSEYSG+Y
Sbjct: 88 VIALTVQLAKKARENVWSTLTEK-EKKARPYPLIS----GDVGPYAAYLADGSEYSGNY- 141
Query: 399 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSC 457
S+++ L +HRP + LV D LALETIP E AL +LL+ EFP +A++SF+
Sbjct: 142 GSISKETLKDFHRPRLAVLVDEECDLLALETIPNYLEVQALSELLQEEFPAVEAYISFTA 201
Query: 458 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIV 515
+ S G I L+ QI A+G+NC P +L++ I P V
Sbjct: 202 QTKDSISDGTAIEKVAQ--LVDRSPQILALGINCSSPLIYKSLLQKIAAITEKPLV---T 256
Query: 516 YPNKGGVWDSVHMKWLD-TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
YPN G ++D H W S+L W + G I+GGCC +I+ +
Sbjct: 257 YPNSGEIYDGKHQNWTKAAASSGSLLENTLTWYKLGAKILGGCCRTRPADIKNL 310
>gi|450098183|ref|ZP_21857865.1| homocysteine methyltransferase [Streptococcus mutans SF1]
gi|450169546|ref|ZP_21883043.1| homocysteine methyltransferase [Streptococcus mutans SM4]
gi|449221751|gb|EMC21508.1| homocysteine methyltransferase [Streptococcus mutans SF1]
gi|449247075|gb|EMC45364.1| homocysteine methyltransferase [Streptococcus mutans SM4]
Length = 316
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 135/249 (54%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ Y P H ++R+G+DI+ +S YQA+ L G S++EA +
Sbjct: 30 DVSGK-LWSAKYPLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV G D LALETIP EA ALV+LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ I P V YP
Sbjct: 204 GTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 106/196 (54%), Gaps = 10/196 (5%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
+ +GPY L DGSEY+G+Y + + L +HR ++ LV G D LALETIP EA
Sbjct: 121 SGDVGPYAAYLADGSEYTGNY-GQLDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEA 179
Query: 437 LALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
ALV+LL+ EFP +A++SF+ ++ T S G I L+ QI A+G+NC PS
Sbjct: 180 QALVELLQEEFPSVEAYMSFTAQNGTTISDGTAIEEVAE--LIDKASQILALGINCSSPS 237
Query: 496 HVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVN 552
S+L++ I P V YPN G V+D H W + D +++L W G
Sbjct: 238 VYSSLLKKIADITDKPLV---TYPNSGEVYDGQHQMWTQSADLSHTLLENTKIWHTFGAK 294
Query: 553 IIGGCCEVTSYEIQQM 568
++GGCC +I+ +
Sbjct: 295 VVGGCCRTRPNDIESL 310
>gi|450164165|ref|ZP_21881166.1| homocysteine methyltransferase [Streptococcus mutans B]
gi|449242245|gb|EMC40843.1| homocysteine methyltransferase [Streptococcus mutans B]
Length = 316
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 135/249 (54%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL H ++R+G+DI+ +S YQA+ L G S++EA +
Sbjct: 30 DVSGK-LWSAKYLLENSSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV G D LALETIP EA ALV+LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ I P V YP
Sbjct: 204 GTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 106/196 (54%), Gaps = 10/196 (5%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
+ +GPY L DGSEY+G+Y + + L +HR ++ LV G D LALETIP EA
Sbjct: 121 SGDVGPYAAYLADGSEYTGNY-GQLDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEA 179
Query: 437 LALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
ALV+LL+ EFP +A++SF+ ++ T S G I L+ QI A+G+NC PS
Sbjct: 180 QALVELLQEEFPSVEAYMSFTAQNGTTISDGTAIEEVAE--LIDKASQILALGINCSSPS 237
Query: 496 HVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVN 552
S+L++ I P V YPN G V+D H W + D +++L W G
Sbjct: 238 VYSSLLKKIADITDKPLV---TYPNSGEVYDGQHQMWTQSADISHTLLENTKIWHTFGAK 294
Query: 553 IIGGCCEVTSYEIQQM 568
++GGCC +I+ +
Sbjct: 295 VVGGCCRTRPNDIESL 310
>gi|290580603|ref|YP_003484995.1| methyltransferase [Streptococcus mutans NN2025]
gi|450029484|ref|ZP_21832688.1| homocysteine methyltransferase [Streptococcus mutans G123]
gi|450067271|ref|ZP_21846525.1| homocysteine methyltransferase [Streptococcus mutans NLML9]
gi|450093754|ref|ZP_21856740.1| homocysteine methyltransferase [Streptococcus mutans W6]
gi|450148668|ref|ZP_21875726.1| homocysteine methyltransferase [Streptococcus mutans 14D]
gi|254997502|dbj|BAH88103.1| putative methyltransferase [Streptococcus mutans NN2025]
gi|449194410|gb|EMB95766.1| homocysteine methyltransferase [Streptococcus mutans G123]
gi|449208207|gb|EMC08824.1| homocysteine methyltransferase [Streptococcus mutans NLML9]
gi|449217020|gb|EMC17098.1| homocysteine methyltransferase [Streptococcus mutans W6]
gi|449235461|gb|EMC34418.1| homocysteine methyltransferase [Streptococcus mutans 14D]
Length = 316
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 135/249 (54%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P H ++R+G+DI+ +S YQA+ L G S++EA +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV D LALETIP EA ALV+LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSIEAYMSFTAQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ I P V YP
Sbjct: 204 GTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 136/300 (45%), Gaps = 33/300 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS-------IGPYGTVLRDGSEY 333
DV G LWS+ YL P H ++R I T +S + YG + +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 334 SGHYVDSMTEADLIAWHR-PNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSE 392
V A W E VR P IS +GPY L DGSE
Sbjct: 89 IALTVSLAKNAREKVWQELSEKEKQVRP--------YPLIS----GDVGPYAAYLADGSE 136
Query: 393 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKA 451
Y+G+Y + + L +HR ++ LV D LALETIP EA ALV+LL+ EFP +A
Sbjct: 137 YTGNY-GQLDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSIEA 195
Query: 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHP 509
++SF+ ++ T S G I L+ QI A+G+NC PS S+L++ I P
Sbjct: 196 YMSFTAQNGTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKP 253
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
V YPN G V+D H W + D +++L W G ++GGCC +I+ +
Sbjct: 254 LV---TYPNSGEVYDGQHQMWTQSADISHTLLENTKIWHTFGAKVVGGCCRTRPNDIESL 310
>gi|450110805|ref|ZP_21862355.1| homocysteine methyltransferase [Streptococcus mutans SM6]
gi|449224579|gb|EMC24211.1| homocysteine methyltransferase [Streptococcus mutans SM6]
Length = 316
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 135/249 (54%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P H ++R+G+DI+ +S YQA+ L G S++EA +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV D LALETIP EA ALV+LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ I P V YP
Sbjct: 204 GTTISDGTAIEEVAE--LIDKSSQILALGINCSSPSVYSSLLKKIADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 136/300 (45%), Gaps = 33/300 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS-------IGPYGTVLRDGSEY 333
DV G LWS+ YL P H ++R I T +S + YG + +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 334 SGHYVDSMTEADLIAWHR-PNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSE 392
V A W E VR P IS +GPY L DGSE
Sbjct: 89 IALTVSLAKNAREKVWQELSEKEKQVRP--------YPLIS----GDVGPYAAYLADGSE 136
Query: 393 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKA 451
Y+G+Y + + L +HR ++ LV D LALETIP EA ALV+LL+ EFP +A
Sbjct: 137 YTGNY-GQLDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSVEA 195
Query: 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHP 509
++SF+ ++ T S G I L+ QI A+G+NC PS S+L++ I P
Sbjct: 196 YMSFTAQNGTTISDGTAIEEVAE--LIDKSSQILALGINCSSPSVYSSLLKKIADITDKP 253
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
V YPN G V+D H W + D +++L W G ++GGCC +I+ +
Sbjct: 254 LV---TYPNSGEVYDGQHQMWTQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPNDIESL 310
>gi|357388505|ref|YP_004903344.1| putative homocysteine S-methyltransferase [Kitasatospora setae
KM-6054]
gi|311894980|dbj|BAJ27388.1| putative homocysteine S-methyltransferase [Kitasatospora setae
KM-6054]
Length = 312
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 138/302 (45%), Gaps = 18/302 (5%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G LLDG +++++ DG LWS+ L EP + HR + + A +
Sbjct: 20 GPVLLDGGLSNRLAEQGCDLSDG--LWSARLLLDEPGQLLAAHRAYFAAGAQVATTASYQ 77
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPY 383
+ R G ++ VD+ L+A +VE A + A + AAS+GPY
Sbjct: 78 AS--RAG--FAARGVDAAKTDRLLAL---SVEVARLAAEEVSAELGDGRPRWVAASVGPY 130
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G VL DGSEY GHY ++ A+L +HRP +EAL AG D LA+ET+P EA L +
Sbjct: 131 GAVLADGSEYRGHY--GLSAAELAEFHRPRLEALAAAGPDVLAVETVPDLLEAAVLADCV 188
Query: 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
R G W SF D T GE +S L+A + A+GVNC P V V
Sbjct: 189 RGL-GVPVWFSFGAADGL-TRGGEPLSEVFA--LVAEVPETIAVGVNCCAPREVDAAV-A 243
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
+ + + YPN G WD+ W T + W+ G ++GGCC V +
Sbjct: 244 LAAEVTGLPAVAYPNSGEGWDAAARDW--TGEAAFDPALAADWVAAGARLVGGCCRVGTD 301
Query: 564 EI 565
I
Sbjct: 302 GI 303
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 122/257 (47%), Gaps = 20/257 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG +++++ DG LWS+ L EP + HR + AGA + ++ YQA+
Sbjct: 23 LLDGGLSNRLAEQGCDLSDG--LWSARLLLDEPGQLLAAHRAYFAAGAQVATTASYQASR 80
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIE-TAASIGPY 127
G + LL SV++ A ++ + L G AAS+GPY
Sbjct: 81 AGFAARGVDAAKTDRLLALSVEVARLAAEEVSA----------ELGDGRPRWVAASVGPY 130
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G VL DGSEY GHY ++ A+L +HRP +EAL AG D LA+ET+P EA L +
Sbjct: 131 GAVLADGSEYRGHY--GLSAAELAEFHRPRLEALAAAGPDVLAVETVPDLLEAAVLADCV 188
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
R G W SF D T GE +S L+A + A+GVNC P V V
Sbjct: 189 RGL-GVPVWFSFGAADGL-TRGGEPLSEVFA--LVAEVPETIAVGVNCCAPREVDAAV-A 243
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + + YPN G
Sbjct: 244 LAAEVTGLPAVAYPNSG 260
>gi|450070434|ref|ZP_21847568.1| homocysteine methyltransferase [Streptococcus mutans M2A]
gi|449213920|gb|EMC14243.1| homocysteine methyltransferase [Streptococcus mutans M2A]
Length = 316
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 135/249 (54%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P H ++R+G+DI+ +S YQA+ L G S++EA +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV D LALETIP EA ALV+LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTVQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ I P V YP
Sbjct: 204 GTTISDGTAIEEVAE--LIDKSSQILALGINCSSPSVYSSLLKKIADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 136/300 (45%), Gaps = 33/300 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS-------IGPYGTVLRDGSEY 333
DV G LWS+ YL P H ++R I T +S + YG + +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 334 SGHYVDSMTEADLIAWHR-PNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSE 392
V A W E VR P IS +GPY L DGSE
Sbjct: 89 IALTVSLAKNAREKVWQELSEKEKQVRP--------YPLIS----GDVGPYAAYLADGSE 136
Query: 393 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKA 451
Y+G+Y + + L +HR ++ LV D LALETIP EA ALV+LL+ EFP +A
Sbjct: 137 YTGNY-GQLDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSVEA 195
Query: 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHP 509
++SF+ ++ T S G I L+ QI A+G+NC PS S+L++ I P
Sbjct: 196 YMSFTVQNGTTISDGTAIEEVAE--LIDKSSQILALGINCSSPSVYSSLLKKIADITDKP 253
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
V YPN G V+D H W + D +++L W G ++GGCC +I+ +
Sbjct: 254 LV---TYPNSGEVYDGQHQMWTQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPNDIESL 310
>gi|450145620|ref|ZP_21874652.1| homocysteine methyltransferase [Streptococcus mutans 1ID3]
gi|449149128|gb|EMB52943.1| homocysteine methyltransferase [Streptococcus mutans 1ID3]
Length = 316
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 135/249 (54%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P H ++R+G+DI+ +S YQA+ L G S++EA +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQMIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV D LALETIP EA ALV+LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ I P V YP
Sbjct: 204 GTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 136/300 (45%), Gaps = 33/300 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS-------IGPYGTVLRDGSEY 333
DV G LWS+ YL P H ++R I T +S + YG + +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQMIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 334 SGHYVDSMTEADLIAWHR-PNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSE 392
V A W E VR P IS +GPY L DGSE
Sbjct: 89 IALTVSLAKNAREKVWQELSEKEKQVRP--------YPLIS----GDVGPYAAYLADGSE 136
Query: 393 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKA 451
Y+G+Y + + L +HR ++ LV D LALETIP EA ALV+LL+ EFP +A
Sbjct: 137 YTGNY-GQLDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSVEA 195
Query: 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHP 509
++SF+ ++ T S G I L+ QI A+G+NC PS S+L++ I P
Sbjct: 196 YMSFTAQNGTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKP 253
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
V YPN G V+D H W + D +++L W G ++GGCC +I+ +
Sbjct: 254 LV---TYPNSGEVYDGQHQMWTQSADISHTLLENTKIWHTFGAKVVGGCCRTRPNDIESL 310
>gi|326501794|dbj|BAK06389.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 360
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 140/269 (52%), Gaps = 23/269 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG+ +++ H D LWS+ L + P + H D++ AGA+II ++ YQA +
Sbjct: 23 VVDGALGTELEAHGADLQD--ELWSARCLVSAPHLIRKVHLDYLEAGANIITTASYQATL 80
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK----DKENQTPDINLNKTFNLLTGH---IETA 121
G S ++ LL +SVQ+ A+ + ++ P ++ + +G + A
Sbjct: 81 QGFQSRGVSREQGEALLRRSVQIAQEARAIFVEGRSKGPYAARDEKDAVASGARRPVLVA 140
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
AS+G YG L DGSEY+G Y S+T+ L +HR ++ L AG D +A ETIP + EA
Sbjct: 141 ASVGSYGAYLADGSEYTGDYGRSVTKEALKNFHRRRLQVLADAGPDLIAFETIPNKLEAQ 200
Query: 182 ALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVNCVR 237
A +LL E + AW SF+ KD + G+ I ++ SC ++ A+G+NC
Sbjct: 201 AYAELLEENDIRIPAWFSFTSKDGASAASGDPITECAAVADSC-----RRVAAVGINCTV 255
Query: 238 PSHVSTLVRCIKQ--SHPTVQTIVYPNKG 264
P ++ L+ I + S P V VYPN G
Sbjct: 256 PRLINGLILSISKVTSKPIV---VYPNTG 281
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 111/220 (50%), Gaps = 23/220 (10%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
AAS+G YG L DGSEY+G Y S+T+ L +HR ++ L AG D +A ETIP + EA
Sbjct: 140 AASVGSYGAYLADGSEYTGDYGRSVTKEALKNFHRRRLQVLADAGPDLIAFETIPNKLEA 199
Query: 437 LALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVNCV 492
A +LL E + AW SF+ KD + G+ I ++ SC ++ A+G+NC
Sbjct: 200 QAYAELLEENDIRIPAWFSFTSKDGASAASGDPITECAAVADSC-----RRVAAVGINCT 254
Query: 493 RPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYS---------ILH 541
P ++ L+ I + S P V VYPN G + + +W+D+ + +
Sbjct: 255 VPRLINGLILSISKVTSKPIV---VYPNTGETYVAETKEWVDSAGAGAGGGGAPGTDFVS 311
Query: 542 YVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEFNTKKND 581
V +W + G +++GGCC ++ + + E + D
Sbjct: 312 CVGKWRQAGASLVGGCCRTAPATVRAISRALREADAADTD 351
>gi|449941189|ref|ZP_21805419.1| homocysteine methyltransferase [Streptococcus mutans 11A1]
gi|449152233|gb|EMB55944.1| homocysteine methyltransferase [Streptococcus mutans 11A1]
Length = 316
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 135/249 (54%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P H ++R+G+DI+ +S YQA+ L G S++EA +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV D LALETIP EA AL++LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALIELLQEEFPSVEAYMSFTAQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ I P V YP
Sbjct: 204 GTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 139/306 (45%), Gaps = 33/306 (10%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS-------IGPYGTVLRDGSEY 333
DV G LWS+ YL P H ++R I T +S + YG + +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 334 SGHYVDSMTEADLIAWHR-PNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSE 392
V A W E VR P IS +GPY L DGSE
Sbjct: 89 IALTVSLAKNAREKVWQELSEKEKQVRP--------YPLIS----GDVGPYAAYLADGSE 136
Query: 393 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKA 451
Y+G+Y + + L +HR ++ LV D LALETIP EA AL++LL+ EFP +A
Sbjct: 137 YTGNY-GQLDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALIELLQEEFPSVEA 195
Query: 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHP 509
++SF+ ++ T S G I L+ QI A+G+NC PS S+L++ I P
Sbjct: 196 YMSFTAQNGTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKP 253
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
V YPN G V+D H W + D +++L W G ++GGCC +I+ +
Sbjct: 254 LV---TYPNSGEVYDGQHQMWTQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPNDIESL 310
Query: 569 RIMIDE 574
I + E
Sbjct: 311 SIGLRE 316
>gi|449931108|ref|ZP_21802177.1| homocysteine methyltransferase [Streptococcus mutans 3SN1]
gi|449163161|gb|EMB66274.1| homocysteine methyltransferase [Streptococcus mutans 3SN1]
Length = 316
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 135/249 (54%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P H ++R+G+DI+ +S YQA+ L G S++EA +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV D LALETIP EA AL++LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALIELLQEEFPSVEAYMSFTAQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ I P V YP
Sbjct: 204 GTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 136/300 (45%), Gaps = 33/300 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS-------IGPYGTVLRDGSEY 333
DV G LWS+ YL P H ++R I T +S + YG + +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 334 SGHYVDSMTEADLIAWHR-PNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSE 392
V A W E VR P IS +GPY L DGSE
Sbjct: 89 IALTVSLAKNAREKVWQELSEKEKQVRP--------YPLIS----GDVGPYAAYLADGSE 136
Query: 393 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKA 451
Y+G+Y + + L +HR ++ LV D LALETIP EA AL++LL+ EFP +A
Sbjct: 137 YTGNY-GQLDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALIELLQEEFPSVEA 195
Query: 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHP 509
++SF+ ++ T S G I L+ QI A+G+NC PS S+L++ I P
Sbjct: 196 YMSFTAQNGTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKP 253
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
V YPN G V+D H W + D +++L W G ++GGCC +I+ +
Sbjct: 254 LV---TYPNSGEVYDGQHQMWTQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPNDIESL 310
>gi|326505178|dbj|BAK02976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 137/261 (52%), Gaps = 19/261 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +++ H D PLWS+ + + P + H D+I AGA+II ++ YQA +
Sbjct: 36 VLDGGLATELEAHGADLND--PLWSAKCILSSPHLIRKVHLDYIEAGANIIITASYQATI 93
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAASIG 125
G+S+++ +LL KSV++ + A++ KE+ L I AASIG
Sbjct: 94 QGFEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTALRP--------ILVAASIG 145
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
YG L DGSEYSG Y ++ T L +HR ++ L A D +A ETIP + EA A V+
Sbjct: 146 SYGAYLADGSEYSGDYGEAGTLEFLKDFHRRRLQVLAEARPDLIAFETIPNKLEAQAYVE 205
Query: 186 LLREFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIGVNCVRPSHVST 243
LL E +W SF+ KD + G+ S + +AN ++ A+G+NC P + +
Sbjct: 206 LLDECNINIPSWFSFNSKDGVNVVSGD---SLIECANIANACAKVGAVGINCTPPRFIHS 262
Query: 244 LVRCIKQSHPTVQTIVYPNKG 264
L+ I++ ++YPN G
Sbjct: 263 LILSIRKVTDK-PILIYPNSG 282
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 159/329 (48%), Gaps = 21/329 (6%)
Query: 255 VQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHI 314
V+ V G +LDG +++ H D PLWS+ + + P + H D+I
Sbjct: 24 VRRWVEAGGGRLVLDGGLATELEAHGADLND--PLWSAKCILSSPHLIRKVHLDYIEAGA 81
Query: 315 ETAASIGPYGTVLRDGSEYSGHYVDS----MTEADLIAWHRPNVEALVRAGVDYLALIKP 370
+ T+ G E G + +T++ IA H E ++ D ++P
Sbjct: 82 NIIITASYQATI--QGFEAKGFSKEQGENLLTKSVEIA-HEAR-EMFLKEHPDQSTALRP 137
Query: 371 SISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI 430
+ AASIG YG L DGSEYSG Y ++ T L +HR ++ L A D +A ETI
Sbjct: 138 IL---VAASIGSYGAYLADGSEYSGDYGEAGTLEFLKDFHRRRLQVLAEARPDLIAFETI 194
Query: 431 PAEKEALALVKLLREFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIG 488
P + EA A V+LL E +W SF+ KD + G+ S + +AN ++ A+G
Sbjct: 195 PNKLEAQAYVELLDECNINIPSWFSFNSKDGVNVVSGD---SLIECANIANACAKVGAVG 251
Query: 489 VNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE--DEYSILHYVPQW 546
+NC P + +L+ I++ ++YPN G +D+ +W+++ + + YV +W
Sbjct: 252 INCTPPRFIHSLILSIRKVTDK-PILIYPNSGERYDAEKKEWVESTGVSDGDFVSYVGEW 310
Query: 547 LEEGVNIIGGCCEVTSYEIQQMRIMIDEF 575
++G +IGGCC T I+ + ++++
Sbjct: 311 CKDGAALIGGCCRTTPNTIRAISRSLNQY 339
>gi|383647984|ref|ZP_09958390.1| homocysteine methyltransferase [Streptomyces chartreusis NRRL
12338]
Length = 303
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 129/260 (49%), Gaps = 30/260 (11%)
Query: 9 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG ++Q+ + H + D LWS+ L PEA E H + RAGAD+ ++ YQA
Sbjct: 17 VLDGGMSNQLESAGHDLSD----ELWSARLLAQRPEAITEAHLAYFRAGADVAITASYQA 72
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ K G A +L+ SV+L A + + P + AAS GP
Sbjct: 73 TFEGFAKRGIDHDRAAELMALSVELAREAA-RLARVPR------------PLWVAASAGP 119
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L DGSEY G Y +T +L +HRP +E L A D LALET+P EA AL++
Sbjct: 120 YGAMLADGSEYRGRY--GLTVDELERFHRPRLEVLAAARPDVLALETVPDADEAAALLRA 177
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R G AWL++S T G+ + A L A+ D++ A+GVNC P V T
Sbjct: 178 VRGL-GVPAWLTYSVAGG-RTRAGQPLEEAF--ALAADADEVIAVGVNCCAPEDVDTAAA 233
Query: 247 CIKQ--SHPTVQTIVYPNKG 264
+ P V VYPN G
Sbjct: 234 TAARVTGKPVV---VYPNSG 250
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 141/301 (46%), Gaps = 30/301 (9%)
Query: 264 GVKLLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
G +LDG ++Q+ + H + D LWS+ L PEA E H + R + A +
Sbjct: 14 GTVVLDGGMSNQLESAGHDLSD----ELWSARLLAQRPEAITEAHLAYFRAGADVAITAS 69
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
T ++ +D A+L+A +VE L R + +P AAS G
Sbjct: 70 YQATF----EGFAKRGIDHDRAAELMAL---SVE-LAREAARLARVPRPL---WVAASAG 118
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG +L DGSEY G Y +T +L +HRP +E L A D LALET+P EA AL++
Sbjct: 119 PYGAMLADGSEYRGRY--GLTVDELERFHRPRLEVLAAARPDVLALETVPDADEAAALLR 176
Query: 442 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
+R G AWL++S T G+ + A L A+ D++ A+GVNC P V T
Sbjct: 177 AVRGL-GVPAWLTYSVAGG-RTRAGQPLEEAF--ALAADADEVIAVGVNCCAPEDVDTAA 232
Query: 502 RCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
+ P V VYPN G W++ W T V W + G +IGGCC
Sbjct: 233 ATAARVTGKPVV---VYPNSGETWNADARAW--TGRSTFTAGQVKGWQQSGARLIGGCCR 287
Query: 560 V 560
V
Sbjct: 288 V 288
>gi|441149468|ref|ZP_20965231.1| homocysteine methyltransferase [Streptomyces rimosus subsp. rimosus
ATCC 10970]
gi|440619490|gb|ELQ82536.1| homocysteine methyltransferase [Streptomyces rimosus subsp. rimosus
ATCC 10970]
Length = 307
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 129/258 (50%), Gaps = 23/258 (8%)
Query: 9 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG ++Q+ + H + D LWS+ L P A V HR + AGA + ++ YQA
Sbjct: 19 VLDGGLSNQLESAGHDLSDA----LWSARLLAEAPAAVVAAHRTYYEAGAQVAITASYQA 74
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ G EA +LL +SV+L + T G + AAS GP
Sbjct: 75 TFEGFAARGIGAAEAAELLRRSVELAR----------EAARQATAAGAAGPLYVAASAGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L DGSEY G Y ++ A+L +HRP +E L AG D LALET+P EA AL++
Sbjct: 125 YGAMLADGSEYRGRY--GLSVAELERFHRPRLEVLAAAGPDVLALETVPDADEARALLRA 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R G AWLSFS + HT G+ + A L ++ ++ A+GVNC P V
Sbjct: 183 VRGL-GVPAWLSFSAAGE-HTRAGQPLEDAFA--LASDVPEVVAVGVNCCTPEDADQAVA 238
Query: 247 CIKQSHPTVQTIVYPNKG 264
++ +VYPN G
Sbjct: 239 LAARASGK-PVVVYPNSG 255
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 138/299 (46%), Gaps = 23/299 (7%)
Query: 264 GVKLLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
G +LDG ++Q+ + H + D LWS+ L P A V HR + + A +
Sbjct: 16 GPLVLDGGLSNQLESAGHDLSDA----LWSARLLAEAPAAVVAAHRTYYEAGAQVAITAS 71
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
T + G + A+ R +VE L R + AAS G
Sbjct: 72 YQAT-------FEGFAARGIGAAEAAELLRRSVE-LAREAARQATAAGAAGPLYVAASAG 123
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG +L DGSEY G Y ++ A+L +HRP +E L AG D LALET+P EA AL++
Sbjct: 124 PYGAMLADGSEYRGRY--GLSVAELERFHRPRLEVLAAAGPDVLALETVPDADEARALLR 181
Query: 442 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
+R G AWLSFS + HT G+ + A L ++ ++ A+GVNC P V
Sbjct: 182 AVRGL-GVPAWLSFSAAGE-HTRAGQPLEDAFA--LASDVPEVVAVGVNCCTPEDADQAV 237
Query: 502 RCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEV 560
++ +VYPN G WD+ W T +S V W G ++GGCC V
Sbjct: 238 ALAARASGK-PVVVYPNSGENWDAQARAWCGTP-AFSA-DRVASWTAAGARLVGGCCRV 293
>gi|365828095|ref|ZP_09369926.1| hypothetical protein HMPREF0975_01709 [Actinomyces sp. oral taxon
849 str. F0330]
gi|365264277|gb|EHM94087.1| hypothetical protein HMPREF0975_01709 [Actinomyces sp. oral taxon
849 str. F0330]
Length = 325
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 151/314 (48%), Gaps = 24/314 (7%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGH-PLWSSVYLTTEPEACVETHRDFIRGH---IETA 317
++G +LDG+ +++ + VD H PLWS++ LTT PEA + H D+++ I T
Sbjct: 23 SRGPVVLDGAMGTELDS---RGVDTHDPLWSALALTTAPEAVRQVHTDYLKAGARVITTN 79
Query: 318 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA 377
+LR +GH E + A R EA R ++ P A
Sbjct: 80 TYQATLPALLR-----AGHDAHRAREV-IAAGARLAGEAARRFEAEH-----PEAQLLIA 128
Query: 378 ASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
+GPYG L DGSEY+G Y V ++ H P +E L G+D ALET+P EA
Sbjct: 129 GGLGPYGAYLADGSEYTGVYDVGALDAPVFRDVHLPRIEMLAGEGIDLFALETLPRLDEA 188
Query: 437 LALVKLLREFPGQ-KAWLSFSCK-DDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
ALV + + + + W+SF + D H + G ++ A A+ + + A+GVNCV P
Sbjct: 189 QALVGAVEDLAAESECWVSFQVRPDGAHLADGTPLAEAAAWA--ADQETVVAVGVNCVAP 246
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554
V+ + ++++ T + YPN G ++D W E+ + P W GV +I
Sbjct: 247 DVVARALPVLREAT-TKPLVAYPNSGDLYDPATKTWKAGEEGDGLAALAPSWGASGVRLI 305
Query: 555 GGCCEVTSYEIQQM 568
GGCC +I+++
Sbjct: 306 GGCCRTRPAQIREL 319
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 138/261 (52%), Gaps = 22/261 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGH-PLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQAN 67
+LDG+ +++ + VD H PLWS++ LTT PEA + H D+++AGA +I ++ YQA
Sbjct: 28 VLDGAMGTELDS---RGVDTHDPLWSALALTTAPEAVRQVHTDYLKAGARVITTNTYQAT 84
Query: 68 VDNLTKLGYSEQEALDLLHKSVQLMNSAKDK-ENQTPDINLNKTFNLLTGHIETAASIGP 126
+ L + G+ A +++ +L A + E + P+ L L+ G +GP
Sbjct: 85 LPALLRAGHDAHRAREVIAAGARLAGEAARRFEAEHPEAQL-----LIAG------GLGP 133
Query: 127 YGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
YG L DGSEY+G Y V ++ H P +E L G+D ALET+P EA ALV
Sbjct: 134 YGAYLADGSEYTGVYDVGALDAPVFRDVHLPRIEMLAGEGIDLFALETLPRLDEAQALVG 193
Query: 186 LLREFPGQ-KAWLSFSCK-DDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
+ + + + W+SF + D H + G ++ A A+ + + A+GVNCV P V+
Sbjct: 194 AVEDLAAESECWVSFQVRPDGAHLADGTPLAEAAAWA--ADQETVVAVGVNCVAPDVVAR 251
Query: 244 LVRCIKQSHPTVQTIVYPNKG 264
+ ++++ T + YPN G
Sbjct: 252 ALPVLREAT-TKPLVAYPNSG 271
>gi|450063441|ref|ZP_21844907.1| homocysteine methyltransferase [Streptococcus mutans NLML5]
gi|450086507|ref|ZP_21853702.1| homocysteine methyltransferase [Streptococcus mutans NV1996]
gi|450176007|ref|ZP_21885528.1| homocysteine methyltransferase [Streptococcus mutans SM1]
gi|449204738|gb|EMC05524.1| homocysteine methyltransferase [Streptococcus mutans NLML5]
gi|449219465|gb|EMC19432.1| homocysteine methyltransferase [Streptococcus mutans NV1996]
gi|449245921|gb|EMC44242.1| homocysteine methyltransferase [Streptococcus mutans SM1]
Length = 316
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 135/249 (54%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P H ++R+G+DI+ +S YQA+ L G S++EA +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV D LALETIP EA ALV+LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ + P V YP
Sbjct: 204 GTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKVADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 136/300 (45%), Gaps = 33/300 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS-------IGPYGTVLRDGSEY 333
DV G LWS+ YL P H ++R I T +S + YG + +
Sbjct: 30 DVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 334 SGHYVDSMTEADLIAWHR-PNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSE 392
V A W E VR P IS +GPY L DGSE
Sbjct: 89 IALTVSLAKNAREKVWQELSEKEKQVRP--------YPLIS----GDVGPYAAYLADGSE 136
Query: 393 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKA 451
Y+G+Y + + L +HR ++ LV D LALETIP EA ALV+LL+ EFP +A
Sbjct: 137 YTGNY-GQLDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSVEA 195
Query: 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHP 509
++SF+ ++ T S G I L+ QI A+G+NC PS S+L++ + P
Sbjct: 196 YMSFTAQNGTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKVADITDKP 253
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
V YPN G V+D H W + D +++L W G ++GGCC +I+ +
Sbjct: 254 LV---TYPNSGEVYDGQHQMWTQSADISHTLLENTKIWHTFGAKVVGGCCRTRPNDIESL 310
>gi|383829820|ref|ZP_09984909.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Saccharomonospora
xinjiangensis XJ-54]
gi|383462473|gb|EID54563.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Saccharomonospora
xinjiangensis XJ-54]
Length = 330
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 130/257 (50%), Gaps = 28/257 (10%)
Query: 11 DGSFTSQV-SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVD 69
DG +++ +RH + D LWS+ L PE V HR F AGA I ++ YQA+
Sbjct: 49 DGGLATELETRHDLGDA----LWSARLLLDAPEEIVAAHRAFFDAGAVIATTASYQASYS 104
Query: 70 NLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGT 129
G + A LLH+SV+L A+D ++ + + AAS+GPYG
Sbjct: 105 GFAARGIDRKAATALLHRSVELARQARD------EVAGDGVRRWV------AASVGPYGA 152
Query: 130 VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-- 187
L DGSEY G Y S+T L WH P +EALV A D LA+ET+P EA ALV L
Sbjct: 153 ALADGSEYRGDYGLSVTA--LRDWHLPRIEALVEAEPDLLAVETVPDVVEAEALVAALGG 210
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
+ P AWL+++ + D T G+ ++ A + A ++ A+GVNC P V+ + C
Sbjct: 211 ADVP---AWLTYNVEGD-RTRAGQPLTEAFA--VAAEAPEVVAVGVNCCAPDDVAGALAC 264
Query: 248 IKQSHPTVQTIVYPNKG 264
+Q + YPN G
Sbjct: 265 ARQVTDK-PLVAYPNSG 280
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 146/303 (48%), Gaps = 28/303 (9%)
Query: 269 DGSFTSQV-SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVL 327
DG +++ +RH + D LWS+ L PE V HR F + A I +
Sbjct: 49 DGGLATELETRHDLGDA----LWSARLLLDAPEEIVAAHRAFF----DAGAVIATTASYQ 100
Query: 328 RDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVL 387
S ++ +D L+ HR +VE L R D +A + AAS+GPYG L
Sbjct: 101 ASYSGFAARGIDRKAATALL--HR-SVE-LARQARDEVA--GDGVRRWVAASVGPYGAAL 154
Query: 388 RDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL--RE 445
DGSEY G Y S+T L WH P +EALV A D LA+ET+P EA ALV L +
Sbjct: 155 ADGSEYRGDYGLSVTA--LRDWHLPRIEALVEAEPDLLAVETVPDVVEAEALVAALGGAD 212
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 505
P AWL+++ + D T G+ ++ A + A ++ A+GVNC P V+ + C +
Sbjct: 213 VP---AWLTYNVEGD-RTRAGQPLTEAFA--VAAEAPEVVAVGVNCCAPDDVAGALACAR 266
Query: 506 QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
Q + YPN G WD W +S H + +W+ EG ++GGCC V +I
Sbjct: 267 QVTDK-PLVAYPNSGEGWDHDLRSWTGPA-TFSPEH-LREWIAEGAQVVGGCCRVGPADI 323
Query: 566 QQM 568
+
Sbjct: 324 AAL 326
>gi|333990089|ref|YP_004522703.1| homocysteine methyltransferase [Mycobacterium sp. JDM601]
gi|333486057|gb|AEF35449.1| homocysteine methyltransferase [Mycobacterium sp. JDM601]
Length = 312
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 118/232 (50%), Gaps = 12/232 (5%)
Query: 351 RPNVEALVRAGVDYLALIKPSISS-QTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAW 409
R E L+R VD L + AAS+GPYG DGSEY G Y S++E L AW
Sbjct: 86 RRTAERLLRRSVDLARLAGGGARGHRVAASVGPYGAARADGSEYVGRYGLSVSE--LTAW 143
Query: 410 HRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELI 469
HRP +E L AG D LALET+P EA AL++L+ E G AWLS++ + T T G+ +
Sbjct: 144 HRPRLEVLADAGADVLALETVPDVDEAEALMRLVSE-AGVPAWLSYTI-EGTSTRAGQPL 201
Query: 470 SSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMK 529
+ A + A QI A+GVNC P V + I + IVYPN G WD +
Sbjct: 202 TDAFA--VAAGVPQIVAVGVNCCAPDDVLPAIE-IAREITGKPVIVYPNSGESWDG--HR 256
Query: 530 WLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEFNTKKND 581
W+ + + + QW+ G I+GGCC V +I + T++ +
Sbjct: 257 WVGPKTFSA--RFAAQWVAAGARIVGGCCRVGPADIAAAAAALRRTCTQREN 306
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 126/261 (48%), Gaps = 27/261 (10%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGH---PLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
V + DG +++ D+ G PLWS+ L P+ H F AGA I ++
Sbjct: 13 VIVADGGLATELEARGF-DLSGDLSDPLWSARLLLDAPDDVAAVHAAFFAAGAAIATTAS 71
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
YQA+ D G + A LL +SV L A GH AAS
Sbjct: 72 YQASFDGFAARGIDRRTAERLLRRSVDLARLAGGGAR---------------GH-RVAAS 115
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG DGSEY G Y S++E L AWHRP +E L AG D LALET+P EA AL
Sbjct: 116 VGPYGAARADGSEYVGRYGLSVSE--LTAWHRPRLEVLADAGADVLALETVPDVDEAEAL 173
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
++L+ E G AWLS++ + T T G+ ++ A + A QI A+GVNC P V
Sbjct: 174 MRLVSE-AGVPAWLSYTI-EGTSTRAGQPLTDAFA--VAAGVPQIVAVGVNCCAPDDVLP 229
Query: 244 LVRCIKQSHPTVQTIVYPNKG 264
+ I + IVYPN G
Sbjct: 230 AIE-IAREITGKPVIVYPNSG 249
>gi|334185631|ref|NP_001189977.1| homocysteine S-methyltransferase 1 [Arabidopsis thaliana]
gi|332643567|gb|AEE77088.1| homocysteine S-methyltransferase 1 [Arabidopsis thaliana]
Length = 306
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 125/257 (48%), Gaps = 30/257 (11%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG F +Q+ H D PLWS+V L PE H +++ AGADI+ +S YQA +
Sbjct: 22 VVDGGFATQLEIHGAAIND--PLWSAVSLIKNPELIKRVHMEYLEAGADIVVTSSYQATI 79
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G S +E+ LL KSV+L A+D+ + ++N AASIG YG
Sbjct: 80 PGFLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVSGHSYN----RALVAASIGSYG 135
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEYSGHY ++++ L +HR ++ LV AG D LA ETIP + EA A V+LL
Sbjct: 136 AYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLE 195
Query: 189 EFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
E Q AW+ F+ D GE C+ P + S +
Sbjct: 196 EEKVQIPAWICFTSVDGEKAPSGESFE-------------------ECLEPLNKSNNIYA 236
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + +VYPN G
Sbjct: 237 LTKK----AIVVYPNSG 249
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 147/332 (44%), Gaps = 46/332 (13%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+++ ++ ++ G ++DG F +Q+ H D PLWS+V L PE H
Sbjct: 3 LEKKSALLEDLIKKCGGCAVVDGGFATQLEIHGAAIND--PLWSAVSLIKNPELIKRVHM 60
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
+++ + + T+ G ++ + + + +VE V A +
Sbjct: 61 EYLEAGADIVVTSSYQATI-------PGFLSRGLSIEESESLLQKSVELAVEARDRFWEK 113
Query: 368 IKPSISSQT------AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG 421
+ +S + AASIG YG L DGSEYSGHY ++++ L +HR ++ LV AG
Sbjct: 114 VS-KVSGHSYNRALVAASIGSYGAYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAG 172
Query: 422 VDYLALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLAN 480
D LA ETIP + EA A V+LL E Q AW+ F+ D GE
Sbjct: 173 PDLLAFETIPNKLEAQACVELLEEEKVQIPAWICFTSVDGEKAPSGESFE---------- 222
Query: 481 PDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE----DE 536
C+ P + S + + + +VYPN G VWD +WL ++ DE
Sbjct: 223 ---------ECLEPLNKSNNIYALTKK----AIVVYPNSGEVWDGKAKQWLPSQCFGDDE 269
Query: 537 YSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+ + + +W + G +IGGCC T I +
Sbjct: 270 FEM--FATKWRDLGAKLIGGCCRTTPSTINAI 299
>gi|398411258|ref|XP_003856971.1| hypothetical protein MYCGRDRAFT_107675 [Zymoseptoria tritici
IPO323]
gi|339476856|gb|EGP91947.1| hypothetical protein MYCGRDRAFT_107675 [Zymoseptoria tritici
IPO323]
Length = 437
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 179/388 (46%), Gaps = 41/388 (10%)
Query: 196 WLSFSCKD-DTHTSH-GELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHP 253
WL+FS + D T H G L VT +L + N V P +STL+ ++
Sbjct: 4 WLTFSTRQFDCTTDHKGRL--GIVTLLIL-----LHVHANNIVLPVLLSTLIAKAERKML 56
Query: 254 TVQTI--VYPNKGVKLLDGSFTSQ--VSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDF 309
+ + V +G +LDG+ ++ V H + HPLWS+ L +P + E H D+
Sbjct: 57 SQKEFESVLEARGTLILDGALATELEVRGHDLN----HPLWSAKILKDDPASIEEVHVDY 112
Query: 310 IRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA-GVDYLALI 368
+ A + L + H+ +MTE + A + +V A Y + I
Sbjct: 113 YLAGADVAITASYQAATL----GLTEHF--NMTEDESKALIKRSVSVAQSARSKAYASGI 166
Query: 369 KPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE 428
S A S+GPYG L +GSEY G Y + TE + +HRP ++AL+ AG D LA+E
Sbjct: 167 DSSRRLLVAGSVGPYGAYLSNGSEYRGDY--ARTEKEFQDFHRPRIQALINAGADLLAIE 224
Query: 429 TIPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
TIP+ E ++ LLR +FP AWLS + T + V + + DQI
Sbjct: 225 TIPSISEIQTILALLRSDFPDAIAWLSCTAH-SAETLCDQTPWEDVLRLVEDHRDQIIGF 283
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW--------LDTE----D 535
G+NCV + ++ + Q ++ + YPN G VWD+V W L +E +
Sbjct: 284 GINCVPMAMADATLKYLSQ-LTSIPLVCYPNSGEVWDAVTKTWHGERPDEALTSEQSSAN 342
Query: 536 EYSILHYVPQWLEEGVNIIGGCCEVTSY 563
+ ++ QW + G +IGGCC ++
Sbjct: 343 DKALALEFDQWSKNGARMIGGCCRTQTW 370
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 135/260 (51%), Gaps = 20/260 (7%)
Query: 9 LLDGSFTSQ--VSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG+ ++ V H + HPLWS+ L +P + E H D+ AGAD+ ++ YQA
Sbjct: 72 ILDGALATELEVRGHDLN----HPLWSAKILKDDPASIEEVHVDYYLAGADVAITASYQA 127
Query: 67 NVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
LT+ +E E+ L+ +SV + SA+ K + ++ + LL A S+G
Sbjct: 128 ATLGLTEHFNMTEDESKALIKRSVSVAQSARSKAYAS---GIDSSRRLLV-----AGSVG 179
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L +GSEY G Y + TE + +HRP ++AL+ AG D LA+ETIP+ E ++
Sbjct: 180 PYGAYLSNGSEYRGDY--ARTEKEFQDFHRPRIQALINAGADLLAIETIPSISEIQTILA 237
Query: 186 LLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
LLR +FP AWLS + T + V + + DQI G+NCV +
Sbjct: 238 LLRSDFPDAIAWLSCTAH-SAETLCDQTPWEDVLRLVEDHRDQIIGFGINCVPMAMADAT 296
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
++ + Q ++ + YPN G
Sbjct: 297 LKYLSQ-LTSIPLVCYPNSG 315
>gi|440796259|gb|ELR17368.1| homocysteine smethyltransferase 1, putative [Acanthamoeba
castellanii str. Neff]
Length = 293
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 130/264 (49%), Gaps = 34/264 (12%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACV--ETHRDFIRAGADIIQSSCYQA 66
++DG +Q+ R D++ + LWS+ L A + HR ++ AGAD++ +S YQA
Sbjct: 20 VVDGGLATQLERLG-ADLN-NSLWSARLLLDSGGAAMIKAVHRAYLDAGADVLITSSYQA 77
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+++ + G E + A+ + D + + L+ AASIGP
Sbjct: 78 SIEGFRQRGLGED-------------DEARAEFWADEDRRRGREWPLV------AASIGP 118
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV---RAGVDYLALETIPAEKEALAL 183
YG L DGSEY G Y M++ + I +H P + L+ D A ET+P KE AL
Sbjct: 119 YGATLHDGSEYRGDYGARMSQEEFIDFHLPRIRLLLADPALAPDLFACETVPCLKEGRAL 178
Query: 184 VKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
VKL FP Q+ WLSF+C+D H S G S AV L + + A+GVNC P +
Sbjct: 179 VKLFETHFPDQRLWLSFTCRDQEHLSDGHKFSEAVVE--LQQSEVVAAVGVNCTSPQFIG 236
Query: 243 TLVRCIKQS--HPTVQTIVYPNKG 264
L+ ++ S P V VYPN G
Sbjct: 237 GLLESVRGSVRKPLV---VYPNSG 257
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 86/160 (53%), Gaps = 11/160 (6%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV---RAGVDYLALETIPAE 433
AASIGPYG L DGSEY G Y M++ + I +H P + L+ D A ET+P
Sbjct: 113 AASIGPYGATLHDGSEYRGDYGARMSQEEFIDFHLPRIRLLLADPALAPDLFACETVPCL 172
Query: 434 KEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 492
KE ALVKL FP Q+ WLSF+C+D H S G S AV L + + A+GVNC
Sbjct: 173 KEGRALVKLFETHFPDQRLWLSFTCRDQEHLSDGHKFSEAVVE--LQQSEVVAAVGVNCT 230
Query: 493 RPSHVSTLVRCIKQS--HPTVQTIVYPNKGGVWDSVHMKW 530
P + L+ ++ S P V VYPN G WD+ +W
Sbjct: 231 SPQFIGGLLESVRGSVRKPLV---VYPNSGEGWDAAAQQW 267
>gi|295835182|ref|ZP_06822115.1| homocysteine S-methyltransferase [Streptomyces sp. SPB74]
gi|197697892|gb|EDY44825.1| homocysteine S-methyltransferase [Streptomyces sp. SPB74]
Length = 304
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 144/304 (47%), Gaps = 33/304 (10%)
Query: 267 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+LDG ++++ + H + D LWS+ L P A HR + E A +
Sbjct: 24 VLDGGLSNELEAAGHGLADA----LWSARLLRDGPAALTAAHRAYASAGAEVATTASYQA 79
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
+ ++ H +D+ +L+A +A + S S AAS+GPYG
Sbjct: 80 SF----EGFARHRIDAARTRELLALS--------------VAAARASGSRWVAASVGPYG 121
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
+L DGSEY G Y + A+L +H P VEAL+ AG D LALET+P +EA AL+ ++R
Sbjct: 122 AMLADGSEYRGRY--GVGRAELERFHGPRVEALLAAGPDVLALETVPDTEEARALLAVVR 179
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 504
G WLS+S D T G+ + +A L A ++I A+GVNC P V+ VR
Sbjct: 180 GC-GVPVWLSYSVADGA-TRAGQPLDAAFG--LAAEAEEIVAVGVNCCAPGEVADAVRRA 235
Query: 505 KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYE 564
+ + YPN G WD+ W D + +W G +IGGCC V E
Sbjct: 236 VAAGGK-PGVAYPNSGERWDAHARGW--RSDPSFVPGLAARWYAAGARLIGGCCRVGPGE 292
Query: 565 IQQM 568
I+ +
Sbjct: 293 IRGV 296
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 134/264 (50%), Gaps = 33/264 (12%)
Query: 5 CKVKLLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSS 62
+ +LDG ++++ + H + D LWS+ L P A HR + AGA++ ++
Sbjct: 20 ARAVVLDGGLSNELEAAGHGLADA----LWSARLLRDGPAALTAAHRAYASAGAEVATTA 75
Query: 63 CYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAA 122
YQA+ + + H+ +++A+ +E + L+ +G AA
Sbjct: 76 SYQASFEGFAR------------HR----IDAARTREL----LALSVAAARASGSRWVAA 115
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
S+GPYG +L DGSEY G Y + A+L +H P VEAL+ AG D LALET+P +EA A
Sbjct: 116 SVGPYGAMLADGSEYRGRY--GVGRAELERFHGPRVEALLAAGPDVLALETVPDTEEARA 173
Query: 183 LVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
L+ ++R G WLS+S D T G+ + +A L A ++I A+GVNC P V+
Sbjct: 174 LLAVVRGC-GVPVWLSYSVADGA-TRAGQPLDAAFG--LAAEAEEIVAVGVNCCAPGEVA 229
Query: 243 TLVRCIKQSHPTVQTIVYPNKGVK 266
VR + + YPN G +
Sbjct: 230 DAVRRAVAAGGK-PGVAYPNSGER 252
>gi|260905380|ref|ZP_05913702.1| homocysteine methyltransferase [Brevibacterium linens BL2]
Length = 308
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 134/286 (46%), Gaps = 26/286 (9%)
Query: 287 HPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADL 346
H LWS+ L P+ E H DFIR + + T L G S+ +
Sbjct: 38 HELWSAALLRDSPDTLAEVHADFIRAGAQIVTTASYQATPL-------GFERASIPAEEG 90
Query: 347 IAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADL 406
+ +VE AG + A S+GPYG L +G+EY+G Y +++ +
Sbjct: 91 LRLIARSVEIAAGAG-----------DALVAGSVGPYGAALGNGAEYTGDY--HLSDEEF 137
Query: 407 IAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG 466
A+HRP +EALV AG D LA+ET P+ E L L E+ G AWLS + D + G
Sbjct: 138 AAFHRPRIEALVNAGADLLAIETQPSLSEITVLAGLADEY-GIPAWLSVTLADQGDLADG 196
Query: 467 ELISSAVTSCLL----ANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGV 522
++ L A+ I+A+GVNCVRPS V+ + + + + I YPN G
Sbjct: 197 SHMADRTPLSDLAEAVADSRMIRAVGVNCVRPSLVAPALAALASAT-DLPLIAYPNSGET 255
Query: 523 WDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+D+ M+W + + + W+ GV IIGGCC T +I +
Sbjct: 256 YDAATMEWREDSAFDTSPSTLAPWVSAGVRIIGGCCRTTPADIAGL 301
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 119/240 (49%), Gaps = 28/240 (11%)
Query: 29 HPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKS 88
H LWS+ L P+ E H DFIRAGA I+ ++ YQA + +E L L+ +S
Sbjct: 38 HELWSAALLRDSPDTLAEVHADFIRAGAQIVTTASYQATPLGFERASIPAEEGLRLIARS 97
Query: 89 VQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEA 148
V++ A D A S+GPYG L +G+EY+G Y +++
Sbjct: 98 VEIAAGAGDA--------------------LVAGSVGPYGAALGNGAEYTGDY--HLSDE 135
Query: 149 DLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTS 208
+ A+HRP +EALV AG D LA+ET P+ E L L E+ G AWLS + D +
Sbjct: 136 EFAAFHRPRIEALVNAGADLLAIETQPSLSEITVLAGLADEY-GIPAWLSVTLADQGDLA 194
Query: 209 HGELISSAVTSCLL----ANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
G ++ L A+ I+A+GVNCVRPS V+ + + + + I YPN G
Sbjct: 195 DGSHMADRTPLSDLAEAVADSRMIRAVGVNCVRPSLVAPALAALASAT-DLPLIAYPNSG 253
>gi|421876552|ref|ZP_16308108.1| Homocysteine S-methyltransferase [Leuconostoc citreum LBAE C10]
gi|372557629|emb|CCF24228.1| Homocysteine S-methyltransferase [Leuconostoc citreum LBAE C10]
Length = 304
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 156/310 (50%), Gaps = 26/310 (8%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
+G +LDG S++ + I + LWS+ L P + H+ + + A
Sbjct: 10 QGPVILDGGLGSEIDKQHIAVANN--LWSASALIQAPNLVRDIHQSYFNAGAQIA----- 62
Query: 323 YGTVLRDGSEYSGHYVDS-MTEADLIAWHRPNVE-ALVRAGVDYLALIKPSISSQT-AAS 379
++ + +VDS ++E + A+ ++ AL R G L K SS A S
Sbjct: 63 ---IVDTYQAHPQTFVDSGLSENE--AYELIDLAVALARDG-----LKKSEKSSGIIAGS 112
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
+GPYG L +G+EY+G Y S+ + +HR ++ LV VD LALET+P KEA A+
Sbjct: 113 VGPYGAYLANGAEYTGDYDLSIQAYQV--FHRQRIKRLVHNNVDILALETMPNFKEAQAI 170
Query: 440 VKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
LL+ EFP +A+LSF+ + H G ++ AV +QI+AIG+NC P ++
Sbjct: 171 ALLLQNEFPEVEAYLSFATEAGDHLWDGTRLAHAV--AYFNQFEQIKAIGINCTAPDNIL 228
Query: 499 TLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
+ IK + + IVYPN G V++ +W+ + + VP W G +IIGGCC
Sbjct: 229 PAITRIK-PNTDKKVIVYPNAGEVYNPETKRWVTNNEPINWRRLVPLWQHAGADIIGGCC 287
Query: 559 EVTSYEIQQM 568
+ +I+++
Sbjct: 288 RTSPEDIREI 297
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 127/257 (49%), Gaps = 22/257 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG S++ + I + LWS+ L P + H+ + AGA I YQA+
Sbjct: 14 ILDGGLGSEIDKQHIAVANN--LWSASALIQAPNLVRDIHQSYFNAGAQIAIVDTYQAHP 71
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G SE EA +L+ +V L K ++ I A S+GPYG
Sbjct: 72 QTFVDSGLSENEAYELIDLAVALARDGLKKSEKSSGI--------------IAGSVGPYG 117
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L +G+EY+G Y S+ + +HR ++ LV VD LALET+P KEA A+ LL+
Sbjct: 118 AYLANGAEYTGDYDLSIQAYQV--FHRQRIKRLVHNNVDILALETMPNFKEAQAIALLLQ 175
Query: 189 -EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP +A+LSF+ + H G ++ AV +QI+AIG+NC P ++ +
Sbjct: 176 NEFPEVEAYLSFATEAGDHLWDGTRLAHAV--AYFNQFEQIKAIGINCTAPDNILPAITR 233
Query: 248 IKQSHPTVQTIVYPNKG 264
IK + + IVYPN G
Sbjct: 234 IK-PNTDKKVIVYPNAG 249
>gi|357131066|ref|XP_003567164.1| PREDICTED: homocysteine S-methyltransferase 4-like [Brachypodium
distachyon]
Length = 359
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 137/267 (51%), Gaps = 22/267 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ H D LWS+ L + P + H D++ AGA+II ++ YQA +
Sbjct: 26 VLDGALGTELEAHGADLQD--ELWSASCLVSAPHIIRKVHLDYLEAGANIITTASYQATL 83
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK----DKENQTPDINLNKTFNLLTGHIETAASI 124
G S +++ LL +SV++ A+ + ++ P + + AAS+
Sbjct: 84 QGFQSRGLSSEQSETLLRRSVEIAQEARAIFVEGRSKGPYAGRENDGSRERRPVLVAASV 143
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
G YG L DGSEY+G Y S+T+ L +HR ++ L AG D +A ETIP + EA A
Sbjct: 144 GSYGAYLADGSEYTGDYGRSVTKEALKNFHRRRLQVLADAGPDLIAFETIPNKLEAQAYS 203
Query: 185 KLLRE----FPGQKAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVNCVR 237
+LL E P AW SF+ KD + + G+ I ++ SC ++ ++G+NC
Sbjct: 204 ELLEENDIRIP---AWFSFTSKDGANAASGDPITECAAVADSC-----RRVASVGINCTA 255
Query: 238 PSHVSTLVRCIKQSHPTVQTIVYPNKG 264
P + L+ I++ + +VYPN G
Sbjct: 256 PGLIHGLILSIRKV-TSKAIVVYPNSG 281
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 104/195 (53%), Gaps = 19/195 (9%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
AAS+G YG L DGSEY+G Y S+T+ L +HR ++ L AG D +A ETIP + EA
Sbjct: 140 AASVGSYGAYLADGSEYTGDYGRSVTKEALKNFHRRRLQVLADAGPDLIAFETIPNKLEA 199
Query: 437 LALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGV 489
A +LL E P AW SF+ KD + + G+ I ++ SC ++ ++G+
Sbjct: 200 QAYSELLEENDIRIP---AWFSFTSKDGANAASGDPITECAAVADSC-----RRVASVGI 251
Query: 490 NCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHY---VPQW 546
NC P + L+ I++ + +VYPN G + + +W+D+ + V +W
Sbjct: 252 NCTAPGLIHGLILSIRKV-TSKAIVVYPNSGETYVAETKEWVDSAGASGTTDFASCVGKW 310
Query: 547 LEEGVNIIGGCCEVT 561
E G +++GGCC +
Sbjct: 311 REAGASVVGGCCRTS 325
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 37/69 (53%)
Query: 299 PEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV 358
P A E R + AAS+G YG L DGSEY+G Y S+T+ L +HR ++ L
Sbjct: 122 PYAGRENDGSRERRPVLVAASVGSYGAYLADGSEYTGDYGRSVTKEALKNFHRRRLQVLA 181
Query: 359 RAGVDYLAL 367
AG D +A
Sbjct: 182 DAGPDLIAF 190
>gi|320534635|ref|ZP_08035080.1| homocysteine S-methyltransferase [Actinomyces sp. oral taxon 171
str. F0337]
gi|320133155|gb|EFW25658.1| homocysteine S-methyltransferase [Actinomyces sp. oral taxon 171
str. F0337]
Length = 325
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 143/312 (45%), Gaps = 22/312 (7%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAAS 319
+G +LDG+ +++ + + LWS+ LTT P+ E H D++ I T
Sbjct: 24 RGPVVLDGAMGTELDARGVDTRNA--LWSARALTTAPDLVREVHSDYLDAGARVITTNTY 81
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAAS 379
++R G + +G A L EA R G ++ P S A
Sbjct: 82 QATLPALIRSGEDAAGARRVIAVGARLAK------EAARRFGEEH-----PEESVLVAGG 130
Query: 380 IGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
IGPYG L DGSEY+G Y +D + H P +E LV G+ ALETIP EA A
Sbjct: 131 IGPYGAYLADGSEYTGAYDIDIPEDPGFQEVHLPRIEVLVGEGIHLFALETIPRLDEAQA 190
Query: 439 LVKLLREF-PGQKAWLSFSCKDD-THTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
LV +++ P + W+SF + D + G ++ A + A + + A+G+NCV P
Sbjct: 191 LVAMVKGLAPRAECWVSFQVRSDGARLADGAPLAEA--AAWGAQEEMVVAVGINCVAPGV 248
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556
V+ + ++ + YPN G ++D W T D I P W++ GV ++GG
Sbjct: 249 VARALPVLRAATGK-PLAAYPNAGDLYDPATKTWQSTGDRAGIPALAPSWIDAGVRLVGG 307
Query: 557 CCEVTSYEIQQM 568
CC +I ++
Sbjct: 308 CCRTRPAQISEL 319
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 125/260 (48%), Gaps = 20/260 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + + LWS+ LTT P+ E H D++ AGA +I ++ YQA +
Sbjct: 28 VLDGAMGTELDARGVDTRNA--LWSARALTTAPDLVREVHSDYLDAGARVITTNTYQATL 85
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQT-PDINLNKTFNLLTGHIETAASIGPY 127
L + G A ++ +L A + + P+ + + A IGPY
Sbjct: 86 PALIRSGEDAAGARRVIAVGARLAKEAARRFGEEHPEES-----------VLVAGGIGPY 134
Query: 128 GTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
G L DGSEY+G Y +D + H P +E LV G+ ALETIP EA ALV +
Sbjct: 135 GAYLADGSEYTGAYDIDIPEDPGFQEVHLPRIEVLVGEGIHLFALETIPRLDEAQALVAM 194
Query: 187 LREF-PGQKAWLSFSCKDD-THTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
++ P + W+SF + D + G ++ A + A + + A+G+NCV P V+
Sbjct: 195 VKGLAPRAECWVSFQVRSDGARLADGAPLAEA--AAWGAQEEMVVAVGINCVAPGVVARA 252
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
+ ++ + YPN G
Sbjct: 253 LPVLRAATGK-PLAAYPNAG 271
>gi|148544269|ref|YP_001271639.1| homocysteine methyltransferase [Lactobacillus reuteri DSM 20016]
gi|184153648|ref|YP_001841989.1| homocysteine methyltransferase [Lactobacillus reuteri JCM 1112]
gi|227364985|ref|ZP_03849026.1| homocysteine methyltransferase [Lactobacillus reuteri MM2-3]
gi|325681702|ref|ZP_08161222.1| homocysteine S-methyltransferase [Lactobacillus reuteri MM4-1A]
gi|148531303|gb|ABQ83302.1| homocysteine S-methyltransferase [Lactobacillus reuteri DSM 20016]
gi|183224992|dbj|BAG25509.1| homocysteine S-methyltransferase [Lactobacillus reuteri JCM 1112]
gi|227069996|gb|EEI08378.1| homocysteine methyltransferase [Lactobacillus reuteri MM2-3]
gi|324979014|gb|EGC15961.1| homocysteine S-methyltransferase [Lactobacillus reuteri MM4-1A]
Length = 310
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 149/313 (47%), Gaps = 19/313 (6%)
Query: 2 SKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQS 61
+++ K L+DG+ ++ + + + + LW++ L +P + H+++ +AG + +
Sbjct: 6 AELTKPLLIDGAMSTALEQ--LGADTNNSLWTASVLANQPALVKKVHQEYFKAGDRLAIT 63
Query: 62 SCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETA 121
YQANV K GYS+QEA L+ ++V L A+D+ Q I +N + G
Sbjct: 64 DTYQANVPAFIKNGYSKQEAHSLIQRAVVLAKEARDEYQQETGI-----YNYVAG----- 113
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
++GPYG L +GSEYSG Y S E +HRP + ++ GVD +A+ET P E L
Sbjct: 114 -ALGPYGAYLANGSEYSGAYHLSTIEYQ--QFHRPRLTDILTVGVDVIAIETQPRLDEVL 170
Query: 182 ALVKLLREF-PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 240
A + L++E P ++SFS KD TH G + AV + +A + A+GVNC+
Sbjct: 171 AELDLVKELAPDTLCYVSFSLKDSTHLPDGTPL--AVAARTVAKYTNVFAVGVNCIPLEE 228
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE 300
V+ + + Q I YPN + T VD P W + L
Sbjct: 229 VTAAIETVHQVTEK-PVIAYPNSSATYDPTTKTWSYPHGRRGLVDYLPQWIAAGLIIVGG 287
Query: 301 ACVETHRDFIRGH 313
C T +D H
Sbjct: 288 CCTTTPQDIAALH 300
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 23/306 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
L+DG+ ++ + + + + LW++ L +P + H+++ + A + V
Sbjct: 13 LIDGAMSTALEQ--LGADTNNSLWTASVLANQPALVKKVHQEYFKAGDRLAITDTYQANV 70
Query: 327 ---LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPY 383
+++G YS S+ + ++ E G I + A ++GPY
Sbjct: 71 PAFIKNG--YSKQEAHSLIQRAVVLAKEARDEYQQETG----------IYNYVAGALGPY 118
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L +GSEYSG Y S E +HRP + ++ GVD +A+ET P E LA + L+
Sbjct: 119 GAYLANGSEYSGAYHLSTIEYQ--QFHRPRLTDILTVGVDVIAIETQPRLDEVLAELDLV 176
Query: 444 REF-PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
+E P ++SFS KD TH G + AV + +A + A+GVNC+ V+ +
Sbjct: 177 KELAPDTLCYVSFSLKDSTHLPDGTPL--AVAARTVAKYTNVFAVGVNCIPLEEVTAAIE 234
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTS 562
+ Q I YPN +D W ++ Y+PQW+ G+ I+GGCC T
Sbjct: 235 TVHQVTEK-PVIAYPNSSATYDPTTKTWSYPHGRRGLVDYLPQWIAAGLIIVGGCCTTTP 293
Query: 563 YEIQQM 568
+I +
Sbjct: 294 QDIAAL 299
>gi|300769244|ref|ZP_07079132.1| homocysteine methyltransferase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|300493273|gb|EFK28453.1| homocysteine methyltransferase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
Length = 309
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 145/308 (47%), Gaps = 26/308 (8%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
N+G + DG+ +++ + + LWS+ + P+A H+ ++
Sbjct: 9 NRGPVVSDGAMATELEKRGV--ATNSALWSATAMLDHPDAIQAVHQSYLDA--------- 57
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPS---ISSQTAA 378
G + + Y + V + +A + A L++ V + + + A
Sbjct: 58 --GAKIMTTNTYQAN-VPAFEQAGIAA---AQARQLIQQAVTIAHTARDASHVTDAVIAG 111
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
SIGPYG L DGSEY+G Y +T + +HR + ++ AGVD LALET+P E A
Sbjct: 112 SIGPYGAYLADGSEYTGAY--QLTPSAYQDFHRERLALIMAAGVDVLALETMPRLDEVQA 169
Query: 439 LVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
LV+L+ + Q W+SFS KD G S AV + +A + A+GVNC ++
Sbjct: 170 LVQLITTTWTQQPYWVSFSIKDPQTLCDGT--SLAVAAKWVAAQPNVVAVGVNCTTLENI 227
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
+ + +K + V IVYPN G +D V W +T + +VPQWL G IIGGC
Sbjct: 228 APALTTLKAAV-AVPLIVYPNSGDQYDPVTKTWQETHLSHQFASFVPQWLAAGARIIGGC 286
Query: 558 CEVTSYEI 565
C T +I
Sbjct: 287 CRTTPKDI 294
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 131/255 (51%), Gaps = 22/255 (8%)
Query: 11 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDN 70
DG+ +++ + + LWS+ + P+A H+ ++ AGA I+ ++ YQANV
Sbjct: 16 DGAMATELEKRGV--ATNSALWSATAMLDHPDAIQAVHQSYLDAGAKIMTTNTYQANVPA 73
Query: 71 LTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
+ G + +A L+ ++V + ++A+D + T + A SIGPYG
Sbjct: 74 FEQAGIAAAQARQLIQQAVTIAHTARDASHVTDAV--------------IAGSIGPYGAY 119
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-RE 189
L DGSEY+G Y +T + +HR + ++ AGVD LALET+P E ALV+L+
Sbjct: 120 LADGSEYTGAY--QLTPSAYQDFHRERLALIMAAGVDVLALETMPRLDEVQALVQLITTT 177
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 249
+ Q W+SFS KD G S AV + +A + A+GVNC +++ + +K
Sbjct: 178 WTQQPYWVSFSIKDPQTLCDGT--SLAVAAKWVAAQPNVVAVGVNCTTLENIAPALTTLK 235
Query: 250 QSHPTVQTIVYPNKG 264
+ V IVYPN G
Sbjct: 236 AAV-AVPLIVYPNSG 249
>gi|414597060|ref|ZP_11446631.1| Homocysteine methyltransferase [Leuconostoc citreum LBAE E16]
gi|390482174|emb|CCF28692.1| Homocysteine methyltransferase [Leuconostoc citreum LBAE E16]
Length = 303
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 155/314 (49%), Gaps = 34/314 (10%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
+G +LDG S++ + I + LWS+ L P + H+ + + A
Sbjct: 10 QGPVILDGGLGSEIDKQHIAVANN--LWSASALIQAPNLVRDIHQSYFNAGAQIAIV--- 64
Query: 323 YGTVLRDGSEYSGH---YVDS-MTEADLIAWHRPNVE-ALVRAGVDYLALIKPSISSQ-- 375
Y H +VDS ++E + A+ ++ AL R G +K S S
Sbjct: 65 --------DTYQAHPQTFVDSGLSENE--AYELIDLAVALARDG------LKKSEKSLGI 108
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
A S+GPYG L +G+EY+G Y S+ A+HR ++ LV VD LALET+P KE
Sbjct: 109 IAGSVGPYGAYLANGAEYTGDYDLSIQAYQ--AFHRQRIKRLVHNNVDILALETMPNFKE 166
Query: 436 ALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
A A+ LL+ EFP +A+LSF+ + H G ++ AV +QI+AIG+NC P
Sbjct: 167 AQAIALLLQNEFPEVEAYLSFATEVGDHLWDGTRLAHAV--AYFNQFEQIKAIGINCTAP 224
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554
++ + IK + + IVYPN G V++ +W+ + + VP W G +II
Sbjct: 225 DNILPAIMRIK-PNTDKKVIVYPNAGEVYNPETKRWVTNNEPINWRRLVPLWQHAGADII 283
Query: 555 GGCCEVTSYEIQQM 568
GGCC + +I+++
Sbjct: 284 GGCCRTSPEDIREI 297
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 127/257 (49%), Gaps = 22/257 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG S++ + I + LWS+ L P + H+ + AGA I YQA+
Sbjct: 14 ILDGGLGSEIDKQHIAVANN--LWSASALIQAPNLVRDIHQSYFNAGAQIAIVDTYQAHP 71
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G SE EA +L+ +V L K ++ I A S+GPYG
Sbjct: 72 QTFVDSGLSENEAYELIDLAVALARDGLKKSEKSLGI--------------IAGSVGPYG 117
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L +G+EY+G Y S+ A+HR ++ LV VD LALET+P KEA A+ LL+
Sbjct: 118 AYLANGAEYTGDYDLSIQAYQ--AFHRQRIKRLVHNNVDILALETMPNFKEAQAIALLLQ 175
Query: 189 -EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP +A+LSF+ + H G ++ AV +QI+AIG+NC P ++ +
Sbjct: 176 NEFPEVEAYLSFATEVGDHLWDGTRLAHAV--AYFNQFEQIKAIGINCTAPDNILPAIMR 233
Query: 248 IKQSHPTVQTIVYPNKG 264
IK + + IVYPN G
Sbjct: 234 IK-PNTDKKVIVYPNAG 249
>gi|421738973|ref|ZP_16177307.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Streptomyces sp. SM8]
gi|406692624|gb|EKC96311.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Streptomyces sp. SM8]
Length = 444
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 127/260 (48%), Gaps = 22/260 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG + Q++ D LWS+ L P V HR + AGA++ ++ YQA
Sbjct: 2 VVDGGLSEQLAARGNDLSDA--LWSARLLADAPGEVVAAHRAYYAAGAEVAITASYQATF 59
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ + G A LL SV L A D+ + + +TG + AAS GPYG
Sbjct: 60 EGFARRGVGRVAAARLLGDSVGLARRAADEAREA---------DGMTGPLWVAASAGPYG 110
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
+L DGSEY G Y ++ A+L +HRP +E L AG D LALET+P EA AL++ +R
Sbjct: 111 AMLADGSEYRGRY--GLSVAELERFHRPRLEVLAAAGPDVLALETVPDADEARALLRAVR 168
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
G AWLS+S T G+ ++ A A ++ A+GVNC P V VR
Sbjct: 169 GL-GVPAWLSYSVAGG-RTRAGDRLADAFALAADAP--EVVAVGVNCCDPREVEPAVRLA 224
Query: 249 KQ--SHPTVQTIVYPNKGVK 266
+ P V YPN G +
Sbjct: 225 ARVTGKPVV---AYPNSGER 241
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 119/270 (44%), Gaps = 28/270 (10%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
++DG + Q++ D LWS+ L P V HR + E A + T
Sbjct: 2 VVDGGLSEQLAARGNDLSDA--LWSARLLADAPGEVVAAHRAYYAAGAEVAITASYQATF 59
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL----ALIKPSISSQTAASIGP 382
++ V + A L+ + L R D + P AAS GP
Sbjct: 60 ----EGFARRGVGRVAAARLLG----DSVGLARRAADEAREADGMTGPL---WVAASAGP 108
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG +L DGSEY G Y ++ A+L +HRP +E L AG D LALET+P EA AL++
Sbjct: 109 YGAMLADGSEYRGRY--GLSVAELERFHRPRLEVLAAAGPDVLALETVPDADEARALLRA 166
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
+R G AWLS+S T G+ ++ A A ++ A+GVNC P V VR
Sbjct: 167 VRGL-GVPAWLSYSVAGG-RTRAGDRLADAFALAADAP--EVVAVGVNCCDPREVEPAVR 222
Query: 503 CIKQ--SHPTVQTIVYPNKGGVWDSVHMKW 530
+ P V YPN G WD+ W
Sbjct: 223 LAARVTGKPVV---AYPNSGERWDAAARAW 249
>gi|224102091|ref|XP_002312542.1| homocysteine s-methyltransferase [Populus trichocarpa]
gi|222852362|gb|EEE89909.1| homocysteine s-methyltransferase [Populus trichocarpa]
Length = 339
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 145/274 (52%), Gaps = 20/274 (7%)
Query: 1 MSKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQ 60
+ K ++DG F +++ RH D PLWS+ L + P + H D++ AGA+II
Sbjct: 17 LQKCGGYAVVDGGFATELERHGADLND--PLWSAKCLISSPHLVRKVHLDYLHAGANIIT 74
Query: 61 SSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAK----DKENQTPDINLNKTFNLLTG 116
++ YQA + G SE+EA LL +SV++ A+ DK ++ ++ N+
Sbjct: 75 TASYQATIQGFVAKGLSEEEAELLLRRSVEIACEAREIYYDKCTTKGSLDYIESGNISRR 134
Query: 117 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA 176
+ AASIG YG L DGSEYSG Y D+++ L +HR ++ L ++G D +A ETIP
Sbjct: 135 PVLVAASIGSYGAYLADGSEYSGKYGDAVSLRTLKDFHRRRLQILAKSGADLIAFETIPN 194
Query: 177 EKEALALVKLLREFP-GQKAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIG 232
+ EA A +LL E AW SF+ KD + G+ I +S SC ++ A+G
Sbjct: 195 KLEAKAYAELLEEEEINIPAWFSFNSKDGINVVSGDSILECASIADSC-----KRVVAVG 249
Query: 233 VNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKG 264
+NC P + LV I++ S P V +YPN G
Sbjct: 250 INCTPPRFIHGLVLSIQKATSKPIV---IYPNSG 280
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 163/334 (48%), Gaps = 39/334 (11%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETA--- 317
G ++DG F +++ RH D PLWS+ L + P + H D++ I TA
Sbjct: 22 GYAVVDGGFATELERHGADLND--PLWSAKCLISSPHLVRKVHLDYLHAGANIITTASYQ 79
Query: 318 ASIGPY---GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISS 374
A+I + G + V+ EA I + + + +DY+ +IS
Sbjct: 80 ATIQGFVAKGLSEEEAELLLRRSVEIACEAREIYYDK----CTTKGSLDYIE--SGNISR 133
Query: 375 Q---TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
+ AASIG YG L DGSEYSG Y D+++ L +HR ++ L ++G D +A ETIP
Sbjct: 134 RPVLVAASIGSYGAYLADGSEYSGKYGDAVSLRTLKDFHRRRLQILAKSGADLIAFETIP 193
Query: 432 AEKEALALVKLLREFP-GQKAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAI 487
+ EA A +LL E AW SF+ KD + G+ I +S SC ++ A+
Sbjct: 194 NKLEAKAYAELLEEEEINIPAWFSFNSKDGINVVSGDSILECASIADSC-----KRVVAV 248
Query: 488 GVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTE----DEYSILH 541
G+NC P + LV I++ S P V +YPN G +++ +W+ + DE +
Sbjct: 249 GINCTPPRFIHGLVLSIQKATSKPIV---IYPNSGETYNAELKQWVKSSGVVVDE-DFVS 304
Query: 542 YVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEF 575
Y+ +W E G ++ GGCC T I+ + ++ ++
Sbjct: 305 YIGKWREAGASLFGGCCRTTPNTIRAISRVLSKY 338
>gi|374985977|ref|YP_004961472.1| homocysteine methyltransferase [Streptomyces bingchenggensis BCW-1]
gi|297156629|gb|ADI06341.1| homocysteine methyltransferase [Streptomyces bingchenggensis BCW-1]
Length = 308
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 130/256 (50%), Gaps = 20/256 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG ++Q+ D LWS+ L +P E H + RAGA ++ +S YQA
Sbjct: 18 VLDGGLSNQLEAQGCDLSD--ELWSARLLADDPRQIEEAHAAYARAGARVLITSSYQATY 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ + G E+EA LL +SV+L A + T D + AAS+GPYG
Sbjct: 76 EGFARRGVLEKEATALLERSVELARRAAEGAGGTVDR-----------PVWVAASVGPYG 124
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
+L DGSEY G Y ++ +L +HRP +EAL AG D LALET+P EA AL++ +
Sbjct: 125 AMLADGSEYRGRY--GLSVGELERFHRPRIEALAAAGPDVLALETVPDADEAEALLRAV- 181
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E G WLS+S + HT G+ + A L A DQ+ A+GVNC P V +
Sbjct: 182 EGCGIPVWLSYSIAGE-HTRAGQPLREAFA--LAAGNDQVLAVGVNCCEPGDADRAVE-V 237
Query: 249 KQSHPTVQTIVYPNKG 264
+ +VYPN G
Sbjct: 238 AATTTGKPVVVYPNSG 253
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 142/316 (44%), Gaps = 25/316 (7%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
+G +LDG ++Q+ D LWS+ L +P E H + R +
Sbjct: 13 ERGPLVLDGGLSNQLEAQGCDLSD--ELWSARLLADDPRQIEEAHAAYARAGARVLITSS 70
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
T Y G + E + A +VE RA + + AAS+G
Sbjct: 71 YQAT-------YEGFARRGVLEKEATALLERSVELARRAAEGAGGTVDRPV--WVAASVG 121
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG +L DGSEY G Y ++ +L +HRP +EAL AG D LALET+P EA AL++
Sbjct: 122 PYGAMLADGSEYRGRY--GLSVGELERFHRPRIEALAAAGPDVLALETVPDADEAEALLR 179
Query: 442 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
+ E G WLS+S + HT G+ + A L A DQ+ A+GVNC P V
Sbjct: 180 AV-EGCGIPVWLSYSIAGE-HTRAGQPLREAFA--LAAGNDQVLAVGVNCCEPGDADRAV 235
Query: 502 RCIKQSHPTVQTIVYPNKGGVWDSVHMKWLD--TEDEYSILHYVPQWLEEGVNIIGGCCE 559
+ + +VYPN G WD+ W T D V W + G +IGGCC
Sbjct: 236 E-VAATTTGKPVVVYPNSGEEWDAKARGWRGRATFDP----ARVKAWRDAGARLIGGCCR 290
Query: 560 VTSYEIQQM-RIMIDE 574
V I ++ +M DE
Sbjct: 291 VGPDRIAELAAVMADE 306
>gi|421878240|ref|ZP_16309722.1| Homocysteine methyltransferase [Leuconostoc citreum LBAE C11]
gi|390447854|emb|CCF25842.1| Homocysteine methyltransferase [Leuconostoc citreum LBAE C11]
Length = 304
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 156/310 (50%), Gaps = 26/310 (8%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
+G +LDG S++ + I + LWS+ L P + H+ + + A
Sbjct: 10 QGPVILDGGLGSEIDKQHIAVANN--LWSASALIQAPNLVRDIHQSYFNAGAQIA----- 62
Query: 323 YGTVLRDGSEYSGHYVDS-MTEADLIAWHRPNVE-ALVRAGVDYLALIKPSISSQT-AAS 379
++ + +VDS ++E + A+ ++ AL R G L K SS A S
Sbjct: 63 ---IVDTYQAHPQTFVDSGLSENE--AYELIDLAVALARDG-----LKKSEKSSGIIAGS 112
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
+GPYG L +G+EY+G Y S+ A+HR ++ LV VD LALET+P KEA A+
Sbjct: 113 VGPYGAYLANGAEYTGDYDLSIQAYQ--AFHRQRIKRLVHNNVDILALETMPNFKEAQAI 170
Query: 440 VKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
LL+ EFP +A+LSF+ + + G ++ AV +QI+AIG+NC P ++
Sbjct: 171 ALLLQNEFPEVEAYLSFATEAGDYLWDGTRLAHAV--AYFNQFEQIKAIGINCTAPDNIL 228
Query: 499 TLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
+ IK + + IVYPN G V++ +W+ + + VP W G +IIGGCC
Sbjct: 229 PAITRIK-PNTDKKVIVYPNAGEVYNPETKRWVTNNEPINWRRLVPLWQHAGADIIGGCC 287
Query: 559 EVTSYEIQQM 568
+ +I+++
Sbjct: 288 RTSPEDIREI 297
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 127/257 (49%), Gaps = 22/257 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG S++ + I + LWS+ L P + H+ + AGA I YQA+
Sbjct: 14 ILDGGLGSEIDKQHIAVANN--LWSASALIQAPNLVRDIHQSYFNAGAQIAIVDTYQAHP 71
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G SE EA +L+ +V L K ++ I A S+GPYG
Sbjct: 72 QTFVDSGLSENEAYELIDLAVALARDGLKKSEKSSGI--------------IAGSVGPYG 117
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L +G+EY+G Y S+ A+HR ++ LV VD LALET+P KEA A+ LL+
Sbjct: 118 AYLANGAEYTGDYDLSIQAYQ--AFHRQRIKRLVHNNVDILALETMPNFKEAQAIALLLQ 175
Query: 189 -EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP +A+LSF+ + + G ++ AV +QI+AIG+NC P ++ +
Sbjct: 176 NEFPEVEAYLSFATEAGDYLWDGTRLAHAV--AYFNQFEQIKAIGINCTAPDNILPAITR 233
Query: 248 IKQSHPTVQTIVYPNKG 264
IK + + IVYPN G
Sbjct: 234 IK-PNTDKKVIVYPNAG 249
>gi|194466317|ref|ZP_03072304.1| homocysteine S-methyltransferase [Lactobacillus reuteri 100-23]
gi|194453353|gb|EDX42250.1| homocysteine S-methyltransferase [Lactobacillus reuteri 100-23]
Length = 310
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 155/319 (48%), Gaps = 27/319 (8%)
Query: 2 SKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQS 61
+++ K L+DG+ ++ + + + + LW++ L +P + H+++ +AGA + +
Sbjct: 6 AELTKPLLIDGAMSTALEQ--LGADTNNSLWTASVLANQPALVKKVHQEYFKAGARLAIT 63
Query: 62 SCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETA 121
YQANV + GYS+QEA L+ ++V L A+D+ Q I +N + G
Sbjct: 64 DTYQANVPAFIRNGYSKQEAHSLIQRAVALAKEARDEYQQETGI-----YNYVAG----- 113
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
++GPYG L +GSEY+G Y S E +HRP + ++ GVD +A+ET P E L
Sbjct: 114 -ALGPYGAYLANGSEYTGDYHLSAIEYQ--QFHRPRLTDILTVGVDVIAIETQPRLDEVL 170
Query: 182 ALVKLLREF-PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 240
A + L++E P ++SFS KD TH G + AV + +A + A+GVNC+
Sbjct: 171 AELDLVKELAPYILCYVSFSLKDSTHLPDGTPL--AVAARTVAKYPNVFAVGVNCIPLEE 228
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYL----- 295
V+ + + Q I YPN + T VD P W + L
Sbjct: 229 VTAAIETVHQVTDK-PVIAYPNSSATYDPTTKTWSYPHGRRGLVDYLPQWLAAGLTIIGG 287
Query: 296 --TTEPEACVETHRDFIRG 312
TT P+ H ++++G
Sbjct: 288 CCTTTPQGIAALH-EYLKG 305
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 142/306 (46%), Gaps = 23/306 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
L+DG+ ++ + + + + LW++ L +P + H+++ + A + V
Sbjct: 13 LIDGAMSTALEQ--LGADTNNSLWTASVLANQPALVKKVHQEYFKAGARLAITDTYQANV 70
Query: 327 ---LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPY 383
+R+G YS S+ + + AL + D + I + A ++GPY
Sbjct: 71 PAFIRNG--YSKQEAHSLIQRAV---------ALAKEARDEYQQ-ETGIYNYVAGALGPY 118
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L +GSEY+G Y S E +HRP + ++ GVD +A+ET P E LA + L+
Sbjct: 119 GAYLANGSEYTGDYHLSAIEYQ--QFHRPRLTDILTVGVDVIAIETQPRLDEVLAELDLV 176
Query: 444 REF-PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
+E P ++SFS KD TH G + AV + +A + A+GVNC+ V+ +
Sbjct: 177 KELAPYILCYVSFSLKDSTHLPDGTPL--AVAARTVAKYPNVFAVGVNCIPLEEVTAAIE 234
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTS 562
+ Q I YPN +D W ++ Y+PQWL G+ IIGGCC T
Sbjct: 235 TVHQVTDK-PVIAYPNSSATYDPTTKTWSYPHGRRGLVDYLPQWLAAGLTIIGGCCTTTP 293
Query: 563 YEIQQM 568
I +
Sbjct: 294 QGIAAL 299
>gi|413956526|gb|AFW89175.1| hypothetical protein ZEAMMB73_991702 [Zea mays]
Length = 281
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 116/227 (51%), Gaps = 9/227 (3%)
Query: 45 VETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPD 104
V H ++ AGAD+I SS YQA + G S EA DLL SV+L N A+D+ ++
Sbjct: 8 VPVHMQYLEAGADVIISSSYQATIPGFIARGMSVAEAEDLLRTSVKLANEARDEFWKSTL 67
Query: 105 INLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 164
+N AASIG YG L DGSEYSG Y +T L +HR ++ L A
Sbjct: 68 RKSKPIYN----RALVAASIGSYGAYLADGSEYSGSYGADITAEKLKDFHRRRLQVLASA 123
Query: 165 GVDYLALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLA 223
G D +A E IP + EA ALV+LL E Q +W+ FS D + GE + + +L
Sbjct: 124 GPDLIAFEAIPNQMEAQALVELLEEEKVQIPSWICFSSVDGKNLCSGESFADCLK--ILN 181
Query: 224 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDG 270
+++ +GVNC P + ++ C + VYPN G ++ DG
Sbjct: 182 ASEKVAVVGVNCTPPQFIEGII-CEFRKQTKKAIAVYPNSG-EVWDG 226
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 98/194 (50%), Gaps = 6/194 (3%)
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
AASIG YG L DGSEYSG Y +T L +HR ++ L AG D +A E IP + E
Sbjct: 79 VAASIGSYGAYLADGSEYSGSYGADITAEKLKDFHRRRLQVLASAGPDLIAFEAIPNQME 138
Query: 436 ALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
A ALV+LL E Q +W+ FS D + GE + + +L +++ +GVNC P
Sbjct: 139 AQALVELLEEEKVQIPSWICFSSVDGKNLCSGESFADCLK--ILNASEKVAVVGVNCTPP 196
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE--DEYSILHYVPQWLEEGVN 552
+ ++ C + VYPN G VWD +WL E S +W E G +
Sbjct: 197 QFIEGII-CEFRKQTKKAIAVYPNSGEVWDGRAKRWLPVECLGHKSFDALAKRWQEAGAS 255
Query: 553 IIGGCCEVTSYEIQ 566
+IGGCC T I+
Sbjct: 256 LIGGCCRTTPSTIR 269
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 316 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
AASIG YG L DGSEYSG Y +T L +HR ++ L AG D +A
Sbjct: 79 VAASIGSYGAYLADGSEYSGSYGADITAEKLKDFHRRRLQVLASAGPDLIAF 130
>gi|345854380|ref|ZP_08807214.1| homocysteine methyltransferase [Streptomyces zinciresistens K42]
gi|345634165|gb|EGX55838.1| homocysteine methyltransferase [Streptomyces zinciresistens K42]
Length = 304
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 127/260 (48%), Gaps = 27/260 (10%)
Query: 9 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG ++Q+ + H + D LWS+ L PEA H + AGAD+ ++ YQA
Sbjct: 17 VLDGGMSNQLEAAGHDLSDA----LWSARLLAESPEAITRAHLAYFEAGADVAITASYQA 72
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G + A +LL SV E+ +T + + AAS GP
Sbjct: 73 TFEGFARRGIGRERAAELLALSV---------ESAREAARRARTGGIARA-LWVAASAGP 122
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L DGSEY G Y ++ A+L +HRP +E L AG D LALET+P EA AL++
Sbjct: 123 YGAMLADGSEYRGRY--GLSVAELERFHRPRLEVLAAAGPDALALETVPDSDEAEALLRA 180
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R G WLS+S T G+ + A L A+ D++ A+GVNC P V V
Sbjct: 181 VRGL-GVPVWLSYSVAGG-RTRAGQPLEEAF--ALAADADEVIAVGVNCCAPRDVEGAVA 236
Query: 247 CIKQ--SHPTVQTIVYPNKG 264
+ P V YPN G
Sbjct: 237 TAARVTGRPVV---AYPNSG 253
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 139/311 (44%), Gaps = 31/311 (9%)
Query: 264 GVKLLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
G +LDG ++Q+ + H + D LWS+ L PEA H + + A +
Sbjct: 14 GTVVLDGGMSNQLEAAGHDLSDA----LWSARLLAESPEAITRAHLAYFEAGADVAITAS 69
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--TAAS 379
T ++ + A+L+A +VE+ I+ AAS
Sbjct: 70 YQATF----EGFARRGIGRERAAELLAL---SVESAR---EAARRARTGGIARALWVAAS 119
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
GPYG +L DGSEY G Y ++ A+L +HRP +E L AG D LALET+P EA AL
Sbjct: 120 AGPYGAMLADGSEYRGRY--GLSVAELERFHRPRLEVLAAAGPDALALETVPDSDEAEAL 177
Query: 440 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
++ +R G WLS+S T G+ + A L A+ D++ A+GVNC P V
Sbjct: 178 LRAVRGL-GVPVWLSYSVAGG-RTRAGQPLEEAF--ALAADADEVIAVGVNCCAPRDVEG 233
Query: 500 LVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
V + P V YPN G WD+ W +S V W G +IGGC
Sbjct: 234 AVATAARVTGRPVV---AYPNSGESWDAEARTW-HGRPAFSP-DQVRTWRAAGARLIGGC 288
Query: 558 CEVTSYEIQQM 568
C V I+ +
Sbjct: 289 CRVPPRTIEAV 299
>gi|170016909|ref|YP_001727828.1| homocysteine methyltransferase [Leuconostoc citreum KM20]
gi|169803766|gb|ACA82384.1| Homocysteine S-methyltransferase [Leuconostoc citreum KM20]
Length = 303
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 155/314 (49%), Gaps = 34/314 (10%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
+G +LDG S++ + I + LWS+ L P + H+ + + A
Sbjct: 10 QGPVILDGGLGSEIDKQHIAVANN--LWSASALIQAPNLVRDIHQSYFNAGAQIAIV--- 64
Query: 323 YGTVLRDGSEYSGH---YVDS-MTEADLIAWHRPNVE-ALVRAGVDYLALIKPSISSQ-- 375
Y H +VDS ++E + A+ ++ AL R G +K S S
Sbjct: 65 --------DTYQAHPQTFVDSGLSENE--AYELIDLAVALARDG------LKKSEKSLGI 108
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
A S+GPYG L +G+EY+G Y S+ A+HR ++ LV VD LALET+P KE
Sbjct: 109 IAGSVGPYGAYLANGAEYTGDYDLSIQAYQ--AFHRQRIKRLVHNNVDILALETMPNFKE 166
Query: 436 ALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
A A+ LL+ EFP +A+LSF+ + H G ++ AV +QI+AIG+NC P
Sbjct: 167 AQAIALLLQNEFPEVEAYLSFATEVGDHLWDGTRLAHAV--AYFNQFEQIKAIGINCTAP 224
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554
++ + IK + + I+YPN G V++ +W+ + + VP W G +II
Sbjct: 225 DNILPAIMRIK-PNTDKKVILYPNAGEVYNPETKRWVTNNEPINWRRLVPLWQHAGADII 283
Query: 555 GGCCEVTSYEIQQM 568
GGCC + +I+++
Sbjct: 284 GGCCRTSPEDIREI 297
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 127/257 (49%), Gaps = 22/257 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG S++ + I + LWS+ L P + H+ + AGA I YQA+
Sbjct: 14 ILDGGLGSEIDKQHIAVANN--LWSASALIQAPNLVRDIHQSYFNAGAQIAIVDTYQAHP 71
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G SE EA +L+ +V L K ++ I A S+GPYG
Sbjct: 72 QTFVDSGLSENEAYELIDLAVALARDGLKKSEKSLGI--------------IAGSVGPYG 117
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L +G+EY+G Y S+ A+HR ++ LV VD LALET+P KEA A+ LL+
Sbjct: 118 AYLANGAEYTGDYDLSIQAYQ--AFHRQRIKRLVHNNVDILALETMPNFKEAQAIALLLQ 175
Query: 189 -EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
EFP +A+LSF+ + H G ++ AV +QI+AIG+NC P ++ +
Sbjct: 176 NEFPEVEAYLSFATEVGDHLWDGTRLAHAV--AYFNQFEQIKAIGINCTAPDNILPAIMR 233
Query: 248 IKQSHPTVQTIVYPNKG 264
IK + + I+YPN G
Sbjct: 234 IK-PNTDKKVILYPNAG 249
>gi|403251605|ref|ZP_10917937.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [actinobacterium SCGC
AAA027-L06]
gi|402915056|gb|EJX36047.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [actinobacterium SCGC
AAA027-L06]
Length = 282
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 138/285 (48%), Gaps = 30/285 (10%)
Query: 289 LWSSVYLTTEPEACVETHRDFIRGH---IETAASIGPYGTVLRDGSEYSGHYVDSMTEAD 345
LW+ L + P + H DFI I T+A + + G + D T+
Sbjct: 24 LWTGELLLSNPGEITKAHLDFIVAGAQIIITSAYQLSFAGCQKRG------WSDDQTQRA 77
Query: 346 LIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEAD 405
LIA + +A+ +G + + AAS+GPYG L DGSEY G+Y +++
Sbjct: 78 LIASTQLAKDAVASSGKNV----------RVAASVGPYGAHLADGSEYKGNY--GVSKTV 125
Query: 406 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSH 465
+ +H+ +E L+ D LALET+P E L++LL++ W+++SCK+ T+
Sbjct: 126 IKDFHQRRLEVLLSTNPDLLALETMPDTFEVEVLLELLKDCT-TPFWVTYSCKEGNQTNA 184
Query: 466 GELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDS 525
G+ S AV+ LA P A+G+NC +P + L+ K P V VYPN G +WD+
Sbjct: 185 GQSFSDAVS---LAQP--ALAVGINCTKPELIEGLLNSAKSDKPFV---VYPNSGRIWDA 236
Query: 526 VHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRI 570
+W + + +W G IGGCC + + EI ++ +
Sbjct: 237 EKKQWFGSASTGFDQALIKRWQSSGAEYIGGCCGIGAKEIAELNL 281
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 117/234 (50%), Gaps = 26/234 (11%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQ 90
LW+ L + P + H DFI AGA II +S YQ + K G+S+ + L S Q
Sbjct: 24 LWTGELLLSNPGEITKAHLDFIVAGAQIIITSAYQLSFAGCQKRGWSDDQTQRALIASTQ 83
Query: 91 LMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADL 150
L A + ++ AAS+GPYG L DGSEY G+Y +++ +
Sbjct: 84 LAKDAVASSGK---------------NVRVAASVGPYGAHLADGSEYKGNY--GVSKTVI 126
Query: 151 IAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG 210
+H+ +E L+ D LALET+P E L++LL++ W+++SCK+ T+ G
Sbjct: 127 KDFHQRRLEVLLSTNPDLLALETMPDTFEVEVLLELLKDCT-TPFWVTYSCKEGNQTNAG 185
Query: 211 ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+ S AV+ LA P A+G+NC +P + L+ K P V VYPN G
Sbjct: 186 QSFSDAVS---LAQP--ALAVGINCTKPELIEGLLNSAKSDKPFV---VYPNSG 231
>gi|449999645|ref|ZP_21824614.1| homocysteine methyltransferase [Streptococcus mutans N29]
gi|449186776|gb|EMB88592.1| homocysteine methyltransferase [Streptococcus mutans N29]
Length = 316
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 135/249 (54%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ +L P H ++R+G+DI+ +S YQA+ L G S++EA +
Sbjct: 30 DVSGK-LWSAKHLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV D LALETIP EA ALV+LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ + P V YP
Sbjct: 204 GTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKVADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 105/196 (53%), Gaps = 10/196 (5%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
+ +GPY L DGSEY+G+Y + + L +HR ++ LV D LALETIP EA
Sbjct: 121 SGDVGPYAAYLADGSEYTGNY-GQLDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEA 179
Query: 437 LALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
ALV+LL+ EFP +A++SF+ ++ T S G I L+ QI A+G+NC PS
Sbjct: 180 QALVELLQEEFPSVEAYMSFTAQNGTTISDGTAIEEVAE--LIDKASQILALGINCSSPS 237
Query: 496 HVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVN 552
S+L++ + P V YPN G V+D H W + D +++L W G
Sbjct: 238 VYSSLLKKVADITDKPLV---TYPNSGEVYDGQHQMWTQSADISHTLLENTKIWHTFGAK 294
Query: 553 IIGGCCEVTSYEIQQM 568
++GGCC +I+ +
Sbjct: 295 VVGGCCRTRPNDIESL 310
>gi|388496180|gb|AFK36156.1| unknown [Medicago truncatula]
Length = 238
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 125/227 (55%), Gaps = 9/227 (3%)
Query: 1 MSKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQ 60
++K ++DG F +++ RH I D PLWS+ L T P H D++ +GA+II
Sbjct: 6 LNKCGGYGIIDGGFATELERHGIDLND--PLWSAKCLFTSPHLVRRVHLDYLDSGANIIL 63
Query: 61 SSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKD--KENQTPD-INLNKTFNLLTGH 117
+S YQA + G+S++E LL +SV+L A+D + T D + + +
Sbjct: 64 TSSYQATIQGFEAKGFSKEEGQALLRRSVELAREARDIYYDRCTKDSFDFIRDERYRSRP 123
Query: 118 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 177
I AAS+G YG L DGSEY+G D++T L +HR V+ LV AG D +A ETIP +
Sbjct: 124 ILIAASVGSYGAYLADGSEYTGDNGDAITVHTLKDFHRERVKILVDAGADLIAFETIPNK 183
Query: 178 KEALALVKLLREFPGQK-AWLSFSCKDDTHTSHGELI---SSAVTSC 220
+A A +LL E + AW SFSCKD+ + + G+ I +S SC
Sbjct: 184 LDAQAYAELLEEEGIEIPAWFSFSCKDENNVASGDSILECASIADSC 230
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 108/228 (47%), Gaps = 23/228 (10%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFI---------RGHI 314
G ++DG F +++ RH I D PLWS+ L T P H D++ +
Sbjct: 11 GYGIIDGGFATELERHGIDLND--PLWSAKCLFTSPHLVRRVHLDYLDSGANIILTSSYQ 68
Query: 315 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA--LVRAGVDYLALIKPSI 372
T G +G V+ EA I + R ++ +R D +P +
Sbjct: 69 ATIQGFEAKGFSKEEGQALLRRSVELAREARDIYYDRCTKDSFDFIR---DERYRSRPIL 125
Query: 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA 432
AAS+G YG L DGSEY+G D++T L +HR V+ LV AG D +A ETIP
Sbjct: 126 ---IAASVGSYGAYLADGSEYTGDNGDAITVHTLKDFHRERVKILVDAGADLIAFETIPN 182
Query: 433 EKEALALVKLLREFPGQK-AWLSFSCKDDTHTSHGELI---SSAVTSC 476
+ +A A +LL E + AW SFSCKD+ + + G+ I +S SC
Sbjct: 183 KLDAQAYAELLEEEGIEIPAWFSFSCKDENNVASGDSILECASIADSC 230
>gi|450005787|ref|ZP_21826858.1| homocysteine methyltransferase [Streptococcus mutans NMT4863]
gi|449188243|gb|EMB89966.1| homocysteine methyltransferase [Streptococcus mutans NMT4863]
Length = 316
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 134/249 (53%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P H ++R+G+DI+ +S YQA+ L G S++EA +
Sbjct: 30 DVLGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV D LALETIP E ALV+LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLETQALVELLQEEFPSVEAYMSFTAQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ I P V YP
Sbjct: 204 GTTISDGTAIEEVAE--LIDKSSQILALGINCSSPSVYSSLLKKIADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 135/300 (45%), Gaps = 33/300 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAAS-------IGPYGTVLRDGSEY 333
DV G LWS+ YL P H ++R I T +S + YG + +
Sbjct: 30 DVLGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEAEKM 88
Query: 334 SGHYVDSMTEADLIAWHR-PNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSE 392
V A W E VR P IS +GPY L DGSE
Sbjct: 89 IALTVSLAKNAREKVWQELSEKEKQVRP--------YPLIS----GDVGPYAAYLADGSE 136
Query: 393 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKA 451
Y+G+Y + + L +HR ++ LV D LALETIP E ALV+LL+ EFP +A
Sbjct: 137 YTGNY-GQLDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLETQALVELLQEEFPSVEA 195
Query: 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHP 509
++SF+ ++ T S G I L+ QI A+G+NC PS S+L++ I P
Sbjct: 196 YMSFTAQNGTTISDGTAIEEVAE--LIDKSSQILALGINCSSPSVYSSLLKKIADITDKP 253
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
V YPN G V+D H W + D +++L W G ++GGCC +I+ +
Sbjct: 254 LV---TYPNSGEVYDGQHQMWTQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPNDIESL 310
>gi|410867432|ref|YP_006982043.1| homocysteine methyltransferase [Propionibacterium acidipropionici
ATCC 4875]
gi|410824073|gb|AFV90688.1| homocysteine methyltransferase [Propionibacterium acidipropionici
ATCC 4875]
Length = 315
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 142/329 (43%), Gaps = 30/329 (9%)
Query: 252 HPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIR 311
+P +GV +LDG + + D+ G LWS+ L PE + HRDF
Sbjct: 2 NPPTDLFAAAEEGVVVLDGGLGTLLEARG-NDITGQ-LWSAQILRDRPEEVLAAHRDFFA 59
Query: 312 G--HIETAASIGPYGTVLRDGSEYSG---HYVDSMTEADLIAWHRPNVEALVRAGVDYLA 366
+ T AS V R G G D + + R EA RAG D
Sbjct: 60 AGARVATTASY----QVTRQGLAAIGGRPEEADELLRRSVEVARRAVDEAAARAGGD--- 112
Query: 367 LIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 426
+ AASIGPYG G+EY G Y +T ++L AWHRP +E L D L
Sbjct: 113 ----GVDRWVAASIGPYGAGPGRGTEYDGDY--GLTVSELAAWHRPRIEVLASTHADVLL 166
Query: 427 LETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQA 486
ETIP+ E AL + L + A LS + D EL S VT +LA I+A
Sbjct: 167 AETIPSILEVEALAQELSD-AALPAMLSLTVADGRMRDGTEL--SEVTR-VLAGVRNIRA 222
Query: 487 IGVNC--VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYV 543
+GVNC + + L+ P I YPN G W+ V W E E + L V
Sbjct: 223 VGVNCCGAEDALAAVLILAEGTDRP---LIAYPNSGERWNHVARTWEPREKGELTPLGAV 279
Query: 544 PQWLEEGVNIIGGCCEVTSYEIQQMRIMI 572
P L GV +GGCC VT EI+ M +I
Sbjct: 280 PDLLGAGVRFLGGCCRVTPREIEAMTGLI 308
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 121/262 (46%), Gaps = 21/262 (8%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG + + D+ G LWS+ L PE + HRDF AGA + ++ YQ
Sbjct: 15 VVVLDGGLGTLLEARG-NDITGQ-LWSAQILRDRPEEVLAAHRDFFAAGARVATTASYQV 72
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
L +G +EA +LL +SV++ A D+ + + AASIGP
Sbjct: 73 TRQGLAAIGGRPEEADELLRRSVEVARRAVDEAAARAGGDGVDRW--------VAASIGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG G+EY G Y +T ++L AWHRP +E L D L ETIP+ E AL +
Sbjct: 125 YGAGPGRGTEYDGDY--GLTVSELAAWHRPRIEVLASTHADVLLAETIPSILEVEALAQE 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC--VRPSHVSTL 244
L + A LS + D EL S VT +LA I+A+GVNC + + L
Sbjct: 183 LSD-AALPAMLSLTVADGRMRDGTEL--SEVTR-VLAGVRNIRAVGVNCCGAEDALAAVL 238
Query: 245 VRCIKQSHPTVQTIVYPNKGVK 266
+ P I YPN G +
Sbjct: 239 ILAEGTDRP---LIAYPNSGER 257
>gi|339258478|ref|XP_003369425.1| putative homocysteine S-methyltransferase [Trichinella spiralis]
gi|316966348|gb|EFV50941.1| putative homocysteine S-methyltransferase [Trichinella spiralis]
Length = 324
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 123/222 (55%), Gaps = 13/222 (5%)
Query: 44 CVETHRDFIRAGADIIQSSCYQANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQT 102
C+ + F++ GADI+Q++ YQA + L LG S +E+ +++ + L + + +
Sbjct: 54 CILFYSSFLKVGADIVQTNTYQACISRLQDVLGISIRESYEIVEYAASLARRSIEHFIED 113
Query: 103 PDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV 162
N+N+ + A S+GPY L DGSEYSG Y+ +++ ++ A+
Sbjct: 114 NGRNINEYY--------VAGSVGPYAVSLCDGSEYSGRYIQDTAVSEIRKYYHDQFCAMT 165
Query: 163 RAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLL 222
A VD+LALET+P+ EA +++L E+ W+SFSCKD+ T++G+L S V +
Sbjct: 166 MARVDFLALETMPSLTEAKIALEVLSEYNHPPCWVSFSCKDEYRTNYGDLFSDVVYE--I 223
Query: 223 ANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+ + A+G+NC +P +S L++ + + + +VYPN G
Sbjct: 224 SRCPGVTAVGINCTKPDFISGLLK--QARNVLMPFVVYPNSG 263
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 110/195 (56%), Gaps = 9/195 (4%)
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
A S+GPY L DGSEYSG Y+ +++ ++ A+ A VD+LALET+P+ E
Sbjct: 123 VAGSVGPYAVSLCDGSEYSGRYIQDTAVSEIRKYYHDQFCAMTMARVDFLALETMPSLTE 182
Query: 436 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
A +++L E+ W+SFSCKD+ T++G+L S V ++ + A+G+NC +P
Sbjct: 183 AKIALEVLSEYNHPPCWVSFSCKDEYRTNYGDLFSDVVYE--ISRCPGVTAVGINCTKPD 240
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYS--ILHYVPQWLEEGVNI 553
+S L++ + + + +VYPN G W W++ YS I V +W+E G I
Sbjct: 241 FISGLLK--QARNVLMPFVVYPNSGR-WTRA-TGWVEP-PYYSKPIGERVQEWIELGARI 295
Query: 554 IGGCCEVTSYEIQQM 568
IGGCC V+ ++ ++
Sbjct: 296 IGGCCGVSPMQLAEV 310
>gi|418274810|ref|ZP_12890308.1| homocysteine S-methyltransferase (cobalamin-dependent)
[Lactobacillus plantarum subsp. plantarum NC8]
gi|376010376|gb|EHS83702.1| homocysteine S-methyltransferase (cobalamin-dependent)
[Lactobacillus plantarum subsp. plantarum NC8]
Length = 309
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 148/308 (48%), Gaps = 26/308 (8%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
N+G + DG+ +++ + + LWS+ + P+A H+ ++
Sbjct: 9 NRGPVVSDGAMATELEKRGV--ATNSALWSATAMLDHPDAIQAVHQSYLDA--------- 57
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPS---ISSQTAA 378
G + + Y + V + +A + A L++ V + + + A
Sbjct: 58 --GAKIMTTNTYQAN-VPAFEQAGIAA---AQARQLIQQAVTIAHTARDASHVTDAVIAG 111
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
SIGPYG L DGSEY+G Y +T + +HR + ++ AGVD LALET+P E A
Sbjct: 112 SIGPYGAYLADGSEYTGAY--QLTPSAYQDFHRERLALIMAAGVDVLALETMPRLDEVQA 169
Query: 439 LVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
LV+L+ +P Q W+SFS KD G +++A + A P+ + A+GVNC ++
Sbjct: 170 LVQLITTTWPQQPYWVSFSIKDPQTLCDGTSLAAAAKW-VAAQPNVV-AVGVNCTTLENI 227
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
+ + +K + V IVYPN G +D V W +T + +VPQWL G IIGGC
Sbjct: 228 APALTTLKAAV-AVPLIVYPNSGDQYDPVTKTWQETHLSHQFASFVPQWLAAGARIIGGC 286
Query: 558 CEVTSYEI 565
C T +I
Sbjct: 287 CRTTPKDI 294
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 134/255 (52%), Gaps = 22/255 (8%)
Query: 11 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDN 70
DG+ +++ + + LWS+ + P+A H+ ++ AGA I+ ++ YQANV
Sbjct: 16 DGAMATELEKRGV--ATNSALWSATAMLDHPDAIQAVHQSYLDAGAKIMTTNTYQANVPA 73
Query: 71 LTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
+ G + +A L+ ++V + ++A+D + T + A SIGPYG
Sbjct: 74 FEQAGIAAAQARQLIQQAVTIAHTARDASHVTDAV--------------IAGSIGPYGAY 119
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-RE 189
L DGSEY+G Y +T + +HR + ++ AGVD LALET+P E ALV+L+
Sbjct: 120 LADGSEYTGAY--QLTPSAYQDFHRERLALIMAAGVDVLALETMPRLDEVQALVQLITTT 177
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 249
+P Q W+SFS KD G +++A + A P+ + A+GVNC +++ + +K
Sbjct: 178 WPQQPYWVSFSIKDPQTLCDGTSLAAAAKW-VAAQPN-VVAVGVNCTTLENIAPALTTLK 235
Query: 250 QSHPTVQTIVYPNKG 264
+ V IVYPN G
Sbjct: 236 AAV-AVPLIVYPNSG 249
>gi|408789963|ref|ZP_11201597.1| Homocysteine S-methyltransferase [Lactobacillus florum 2F]
gi|408520702|gb|EKK20736.1| Homocysteine S-methyltransferase [Lactobacillus florum 2F]
Length = 305
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 130/257 (50%), Gaps = 23/257 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + + D LWS+ L + E + H + +AGAD+ + YQANV
Sbjct: 15 VLDGAMGTELEKLGVATND--ELWSANALIDQQEKIYQVHASYFQAGADLAITDTYQANV 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
K G Q+ALDLL V L +A+D+ T + A IGPYG
Sbjct: 73 AAFAKRGIGHQQALDLLATGVHLAQAARDRYRPTGLV---------------AGCIGPYG 117
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY+G+Y ++TE + +HR + L+ AG D L+++T+P +E A+V +L
Sbjct: 118 AYLADGSEYTGNYTKTVTEYE--QFHREKILTLIDAGADLLSVDTMPNFQEIQAVVGILA 175
Query: 189 EFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
W+S S ++ S G ++ V L + IG+NC + +++ LV+
Sbjct: 176 TLDQPIPYWISLSVRNQRQLSDGTDLNRVV--AWLRQQPSVGGIGINCTKMENITPLVKL 233
Query: 248 IKQSHPTVQTIVYPNKG 264
I+ + + IVYPN G
Sbjct: 234 IR-AQTKLPIIVYPNPG 249
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 146/307 (47%), Gaps = 21/307 (6%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ + + D LWS+ L + E + H + + + A + T
Sbjct: 15 VLDGAMGTELEKLGVATND--ELWSANALIDQQEKIYQVHASYFQAGADLAIT----DTY 68
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+ + ++ + DL+A L +A D +P+ A IGPYG
Sbjct: 69 QANVAAFAKRGIGHQQALDLLA----TGVHLAQAARDRY---RPT--GLVAGCIGPYGAY 119
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY+G+Y ++TE + +HR + L+ AG D L+++T+P +E A+V +L
Sbjct: 120 LADGSEYTGNYTKTVTEYE--QFHREKILTLIDAGADLLSVDTMPNFQEIQAVVGILATL 177
Query: 447 PGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 505
W+S S ++ S G ++ V L + IG+NC + +++ LV+ I+
Sbjct: 178 DQPIPYWISLSVRNQRQLSDGTDLNRVV--AWLRQQPSVGGIGINCTKMENITPLVKLIR 235
Query: 506 QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
+ + IVYPN G ++D + W S VP WL G NIIGGCC T +I
Sbjct: 236 -AQTKLPIIVYPNPGDLYDPLTKTWTTVPHVDSFTKEVPHWLAAGANIIGGCCRTTPADI 294
Query: 566 QQMRIMI 572
Q+ +I
Sbjct: 295 AQISRLI 301
>gi|422878927|ref|ZP_16925393.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1059]
gi|422928773|ref|ZP_16961715.1| homocysteine S-methyltransferase [Streptococcus sanguinis ATCC
29667]
gi|422931747|ref|ZP_16964678.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK340]
gi|332366629|gb|EGJ44372.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1059]
gi|339616041|gb|EGQ20699.1| homocysteine S-methyltransferase [Streptococcus sanguinis ATCC
29667]
gi|339619479|gb|EGQ24058.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK340]
Length = 315
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 140/264 (53%), Gaps = 20/264 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ +LDG+ +++ DV G LWS+ YL +P+ + H ++RAG DII +S YQ
Sbjct: 12 EIIILDGALGTELESLGY-DVSGK-LWSAQYLLDQPQIIQDVHESYVRAGIDIITTSSYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAAS 123
A++ + G + ++A DLL ++V L A + +P+ + L+ G S
Sbjct: 70 ASIPAFIEAGLTPEKACDLLKETVFLAQKAIENVWTGLSPEEQKQRPCPLVAG------S 123
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP-AEKEALA 182
+GPY L DGSEY+G+Y ++E + +HRP ++AL+ AG D LA+ETIP + A
Sbjct: 124 VGPYAAYLADGSEYTGNY--QLSEEEYRDFHRPRIQALLEAGSDLLAIETIPNGAEAAAL 181
Query: 183 LVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
L L EFP +A+LSF + +T S G I L Q+ A+G NC P ++
Sbjct: 182 LRLLAEEFPQAEAYLSFVAQSETAISDGTKIEE--LGNLAQKSPQVLAVGFNCTAPHLIA 239
Query: 243 TLVRCIKQ--SHPTVQTIVYPNKG 264
L+ + Q + P + YPN G
Sbjct: 240 PLLDGLGQVCNKP---FLTYPNSG 260
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 148/318 (46%), Gaps = 35/318 (11%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ +LDG+ +++ DV G LWS+ YL +P+ + H ++R I+ +
Sbjct: 13 IIILDGALGTELESLGY-DVSGK-LWSAQYLLDQPQIIQDVHESYVRAGIDIITT----- 65
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWH-----RPNVEALVRAGVDYLALIKPSISSQ---- 375
S Y + + EA L + V +A + + P Q
Sbjct: 66 ------SSYQAS-IPAFIEAGLTPEKACDLLKETVFLAQKAIENVWTGLSPEEQKQRPCP 118
Query: 376 -TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP-AE 433
A S+GPY L DGSEY+G+Y ++E + +HRP ++AL+ AG D LA+ETIP
Sbjct: 119 LVAGSVGPYAAYLADGSEYTGNY--QLSEEEYRDFHRPRIQALLEAGSDLLAIETIPNGA 176
Query: 434 KEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
+ A L L EFP +A+LSF + +T S G I L Q+ A+G NC
Sbjct: 177 EAAALLRLLAEEFPQAEAYLSFVAQSETAISDGTKIEE--LGNLAQKSPQVLAVGFNCTA 234
Query: 494 PSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDT-EDEYSILHYVPQWLEEG 550
P ++ L+ + Q + P + YPN G ++ + W D E E S+L W E+G
Sbjct: 235 PHLIAPLLDGLGQVCNKP---FLTYPNSGETYNGLTKTWHDNPEQERSLLENSKLWKEQG 291
Query: 551 VNIIGGCCEVTSYEIQQM 568
V + GGCC +I Q+
Sbjct: 292 VRLFGGCCRTRPEDIAQL 309
>gi|254556265|ref|YP_003062682.1| homocysteine methyltransferase [Lactobacillus plantarum JDM1]
gi|254045192|gb|ACT61985.1| homocysteine methyltransferase [Lactobacillus plantarum JDM1]
Length = 309
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 147/308 (47%), Gaps = 26/308 (8%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
N+G + DG+ +++ + + LWS+ + P+A H+ ++
Sbjct: 9 NRGPVVSDGAMATELEKRGV--ATNSALWSATAMLDHPDAIQAVHQSYLDA--------- 57
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPS---ISSQTAA 378
G + + Y + V + +A + A L++ V + + + A
Sbjct: 58 --GAKIMTTNTYQAN-VPAFEQAGIAA---AQARQLIQQAVTIAHTARDASHVTDAVIAG 111
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
SIGPYG L DGSEY+G Y +T + +HR + ++ AGVD LALET+P E A
Sbjct: 112 SIGPYGAYLADGSEYTGAY--QLTPSAYQDFHRERLALIMAAGVDVLALETMPRLDEVQA 169
Query: 439 LVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
LV+L+ +P Q W+SFS KD G +++A + A P+ + A+GVNC ++
Sbjct: 170 LVQLITTTWPQQPYWVSFSIKDPQTLCDGTSLAAAAKW-VAAQPNVV-AVGVNCTTLENI 227
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
+ + +K + V IVYPN G +D V W T + +VPQWL G IIGGC
Sbjct: 228 APALTTLKAAV-AVPLIVYPNSGDQYDPVTKTWQATHLSHQFASFVPQWLAAGARIIGGC 286
Query: 558 CEVTSYEI 565
C T +I
Sbjct: 287 CRTTPKDI 294
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 134/255 (52%), Gaps = 22/255 (8%)
Query: 11 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDN 70
DG+ +++ + + LWS+ + P+A H+ ++ AGA I+ ++ YQANV
Sbjct: 16 DGAMATELEKRGV--ATNSALWSATAMLDHPDAIQAVHQSYLDAGAKIMTTNTYQANVPA 73
Query: 71 LTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
+ G + +A L+ ++V + ++A+D + T + A SIGPYG
Sbjct: 74 FEQAGIAAAQARQLIQQAVTIAHTARDASHVTDAV--------------IAGSIGPYGAY 119
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL-RE 189
L DGSEY+G Y +T + +HR + ++ AGVD LALET+P E ALV+L+
Sbjct: 120 LADGSEYTGAY--QLTPSAYQDFHRERLALIMAAGVDVLALETMPRLDEVQALVQLITTT 177
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 249
+P Q W+SFS KD G +++A + A P+ + A+GVNC +++ + +K
Sbjct: 178 WPQQPYWVSFSIKDPQTLCDGTSLAAAAKW-VAAQPN-VVAVGVNCTTLENIAPALTTLK 235
Query: 250 QSHPTVQTIVYPNKG 264
+ V IVYPN G
Sbjct: 236 AAV-AVPLIVYPNSG 249
>gi|420153920|ref|ZP_14660852.1| homocysteine S-methyltransferase [Actinomyces massiliensis F0489]
gi|394756330|gb|EJF39431.1| homocysteine S-methyltransferase [Actinomyces massiliensis F0489]
Length = 325
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 145/322 (45%), Gaps = 34/322 (10%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAAS 319
+G +LDG+ +++ + + PLWS++ LT PEA H D++ I T +
Sbjct: 23 RGPVVLDGAMGTELDARGVGTAN--PLWSALALTEAPEAVTAVHTDYLFAGARVICTNSY 80
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL---IKPSISSQT 376
++R G +TEAD R + R +D L P
Sbjct: 81 QATAPALMRTG----------LTEAD----SRAVIATSARLALDARDLHVKAHPQEPVLV 126
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S+GPYG L DG+EY+G Y + D A H P +E L G+ A+ET P EA
Sbjct: 127 AGSLGPYGAYLADGAEYTGAY--TTDAPDFEAVHLPRLETLSEEGIRLFAIETQPRLDEA 184
Query: 437 LALV-KLLREFPGQKAWLSFSC-KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
LV +L R PG + W+SF D H + G ++ A + D + A+G+NCV P
Sbjct: 185 RWLVERLQRAVPGAECWVSFQVGSDGEHLADGTPLAEA--AAWADTEDAVIAVGLNCVAP 242
Query: 495 SHVSTLVRCIKQS-HPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHY---VPQWLEEG 550
S VS + + + H + + YPN GG +D W Y P+WL+ G
Sbjct: 243 SVVSLALPVLSAATHKPL--VAYPNAGGTYDPDSRTWRPAGGPERFTRYTASAPEWLDAG 300
Query: 551 VNIIGGCCEVTSYEIQQMRIMI 572
V +IGGCC T + + ++
Sbjct: 301 VRLIGGCCRTTPVDTAVLHDLV 322
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 129/263 (49%), Gaps = 29/263 (11%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + + PLWS++ LT PEA H D++ AGA +I ++ YQA
Sbjct: 27 VLDGAMGTELDARGVGTAN--PLWSALALTEAPEAVTAVHTDYLFAGARVICTNSYQATA 84
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKD----KENQTPDINLNKTFNLLTGHIETAASI 124
L + G +E ++ ++ S +L A+D Q P + A S+
Sbjct: 85 PALMRTGLTEADSRAVIATSARLALDARDLHVKAHPQEP--------------VLVAGSL 130
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DG+EY+G Y + D A H P +E L G+ A+ET P EA LV
Sbjct: 131 GPYGAYLADGAEYTGAY--TTDAPDFEAVHLPRLETLSEEGIRLFAIETQPRLDEARWLV 188
Query: 185 -KLLREFPGQKAWLSFSC-KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
+L R PG + W+SF D H + G ++ A + D + A+G+NCV PS VS
Sbjct: 189 ERLQRAVPGAECWVSFQVGSDGEHLADGTPLAEA--AAWADTEDAVIAVGLNCVAPSVVS 246
Query: 243 TLVRCIKQS-HPTVQTIVYPNKG 264
+ + + H + + YPN G
Sbjct: 247 LALPVLSAATHKPL--VAYPNAG 267
>gi|347534176|ref|YP_004840846.1| Homocysteine S-methyltransferase [Lactobacillus sanfranciscensis
TMW 1.1304]
gi|345504232|gb|AEN98914.1| Homocysteine S-methyltransferase [Lactobacillus sanfranciscensis
TMW 1.1304]
Length = 320
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 134/258 (51%), Gaps = 25/258 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + +K D LWS+ L ++ + H D+ +AGADI + YQAN+
Sbjct: 32 VLDGAMGTELEKLGVKTND--LLWSANALINNQKSIYQVHADYFKAGADIAITDTYQANI 89
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
K+G + +ALDL+ K V+L A+D N + A +GPYG
Sbjct: 90 AAFAKVGINHDQALDLIKKGVELAKQARDDFNPAGLV---------------AGCVGPYG 134
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L +G+EY+G Y ++ A+ +H+ ++ L+ AG D ++++T+P E ++VK++
Sbjct: 135 AYLANGAEYTGTY--DLSFAEYQKFHQEKIKTLINAGSDLISVDTMPNFAEIKSVVKIIN 192
Query: 189 EFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
+ P + W+S S KD+ S G + + L I IGVNC + +++ +V
Sbjct: 193 DLPNKIPYWISLSVKDENTLSDGTPLRDVI--IWLGKQSGISGIGVNCTKIENITPIVSL 250
Query: 248 IKQSHPT-VQTIVYPNKG 264
+ H T + +VYPN G
Sbjct: 251 M--HHLTDLPIVVYPNPG 266
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 151/308 (49%), Gaps = 23/308 (7%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ + +K D LWS+ L ++ + H D+ + A I T
Sbjct: 32 VLDGAMGTELEKLGVKTND--LLWSANALINNQKSIYQVHADYFKA----GADIAITDTY 85
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+ + ++ ++ DLI + VE +A D+ + + A +GPYG
Sbjct: 86 QANIAAFAKVGINHDQALDLI---KKGVELAKQARDDF------NPAGLVAGCVGPYGAY 136
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L +G+EY+G Y ++ A+ +H+ ++ L+ AG D ++++T+P E ++VK++ +
Sbjct: 137 LANGAEYTGTY--DLSFAEYQKFHQEKIKTLINAGSDLISVDTMPNFAEIKSVVKIINDL 194
Query: 447 PGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 505
P + W+S S KD+ S G + + L I IGVNC + +++ +V +
Sbjct: 195 PNKIPYWISLSVKDENTLSDGTPLRDVI--IWLGKQSGISGIGVNCTKIENITPIVSLM- 251
Query: 506 QSHPT-VQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYE 564
H T + +VYPN G ++D W + VP+WL EG NIIGGCC +
Sbjct: 252 -HHLTDLPIVVYPNPGDIYDPQTKTWTSVPHTDTFEQEVPRWLAEGANIIGGCCRTIPQD 310
Query: 565 IQQMRIMI 572
I+Q+ +I
Sbjct: 311 IEQITEII 318
>gi|408528410|emb|CCK26584.1| Homocysteine S-methyltransferase ybgG [Streptomyces davawensis JCM
4913]
Length = 302
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 129/260 (49%), Gaps = 30/260 (11%)
Query: 9 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG ++Q+ + H + D LWS+ L PEA E H + AGAD+ ++ YQA
Sbjct: 17 VLDGGMSNQLESAGHDLGD----ELWSARLLAERPEAITEAHLAYFEAGADVAITASYQA 72
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ G +A +LL SV+L A + + + AAS+GP
Sbjct: 73 TFEGFAGRGIGRDQAAELLALSVELAREAARRAKADRPLWV-------------AASVGP 119
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L DGSEY G Y + E L +HRP +E L +A D LALET+P EA AL++
Sbjct: 120 YGAMLADGSEYRGRYGLGVDE--LERFHRPRLEVLAQAAPDVLALETVPDADEARALLRA 177
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R G AWLS+S D T G+ + A A+ +I A+GVNC P V+ +R
Sbjct: 178 VRGL-GVPAWLSYSVSGD-RTRAGQPLQDAFALAADAD--EIIAVGVNCCAPEDVAGAIR 233
Query: 247 CIKQ--SHPTVQTIVYPNKG 264
+ P V VYPN G
Sbjct: 234 TAARITGKPVV---VYPNSG 250
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 141/301 (46%), Gaps = 30/301 (9%)
Query: 264 GVKLLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
G +LDG ++Q+ + H + D LWS+ L PEA E H + + A +
Sbjct: 14 GPVVLDGGMSNQLESAGHDLGD----ELWSARLLAERPEAITEAHLAYFEAGADVAITAS 69
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
T ++G + A+L+A +VE L R +P AAS+G
Sbjct: 70 YQATF----EGFAGRGIGRDQAAELLAL---SVE-LAREAARRAKADRPL---WVAASVG 118
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG +L DGSEY G Y + E L +HRP +E L +A D LALET+P EA AL++
Sbjct: 119 PYGAMLADGSEYRGRYGLGVDE--LERFHRPRLEVLAQAAPDVLALETVPDADEARALLR 176
Query: 442 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
+R G AWLS+S D T G+ + A A+ +I A+GVNC P V+ +
Sbjct: 177 AVRGL-GVPAWLSYSVSGD-RTRAGQPLQDAFALAADAD--EIIAVGVNCCAPEDVAGAI 232
Query: 502 RCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
R + P V VYPN G WD+ W D V W + G +IGGCC
Sbjct: 233 RTAARITGKPVV---VYPNSGESWDADSRTW--HGDSRFTPARVRAWHDSGARLIGGCCR 287
Query: 560 V 560
V
Sbjct: 288 V 288
>gi|301097559|ref|XP_002897874.1| homocysteine S-methyltransferase, putative [Phytophthora infestans
T30-4]
gi|262106622|gb|EEY64674.1| homocysteine S-methyltransferase, putative [Phytophthora infestans
T30-4]
Length = 332
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 107/208 (51%), Gaps = 16/208 (7%)
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-AGVDYLA 426
IKP + ASIG YG L DGSEY G Y T+ +L+AWH+ A ++L
Sbjct: 126 IKPLV----GASIGCYGAALADGSEYRGDY--GKTKNELVAWHKHRFAFFTSYAPANFLI 179
Query: 427 LETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL--LANPDQI 484
ETIP E A V LL EFP A ++ +C + + GE I+ + L L NP Q+
Sbjct: 180 CETIPCLVEVEAFVDLLNEFPTAHAIVAVACHNGKELNSGEPIAR-IPEILAKLNNPSQL 238
Query: 485 QAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWL---DTEDEYSILH 541
AIG+NC P +V +L+ + P VYPN G WD V+ KWL +T S
Sbjct: 239 LAIGINCTPPQYVESLLLELDCPWPKA---VYPNSGEGWDGVNKKWLPADNTGGPSSWEE 295
Query: 542 YVPQWLEEGVNIIGGCCEVTSYEIQQMR 569
Y+P+W + G GGCC + +I+ +R
Sbjct: 296 YLPKWYDAGARFFGGCCRTSPDDIRAIR 323
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 131/267 (49%), Gaps = 21/267 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTE----PEACVETHRDFIRAGADIIQS 61
+V +LDG F +++ + D+ LWS L + + V H ++ AGAD+ +
Sbjct: 18 RVVVLDGGFATELEKDPRVDLSASSLWSGSLLLDQNQHLQDVVVNAHTNYFLAGADVATT 77
Query: 62 SCYQANVDNLTKLGYSEQEALD-LLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIET 120
YQA+VD + G + E ++ L KS+ L A+D ++ +K L G
Sbjct: 78 VSYQASVDGFKREGVTALEDVEKLFAKSIDLGAQARDAAWN--ELQQSKRIKPLVG---- 131
Query: 121 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-AGVDYLALETIPAEKE 179
ASIG YG L DGSEY G Y T+ +L+AWH+ A ++L ETIP E
Sbjct: 132 -ASIGCYGAALADGSEYRGDY--GKTKNELVAWHKHRFAFFTSYAPANFLICETIPCLVE 188
Query: 180 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL--LANPDQIQAIGVNCVR 237
A V LL EFP A ++ +C + + GE I+ + L L NP Q+ AIG+NC
Sbjct: 189 VEAFVDLLNEFPTAHAIVAVACHNGKELNSGEPIAR-IPEILAKLNNPSQLLAIGINCTP 247
Query: 238 PSHVSTLVRCIKQSHPTVQTIVYPNKG 264
P +V +L+ + P VYPN G
Sbjct: 248 PQYVESLLLELDCPWPKA---VYPNSG 271
>gi|450133178|ref|ZP_21870487.1| homocysteine methyltransferase [Streptococcus mutans NLML8]
gi|449151750|gb|EMB55475.1| homocysteine methyltransferase [Streptococcus mutans NLML8]
Length = 316
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 133/249 (53%), Gaps = 15/249 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL H ++R+G+DI+ +S YQA+ L G S++E +
Sbjct: 30 DVSGK-LWSAKYLLENSSIIQMIHETYLRSGSDIVTTSSYQASYQGLCDYGLSQEEVEKM 88
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
+ +V L +A++K Q L++ + + + +GPY L DGSEY+G+Y
Sbjct: 89 IALTVSLAKNAREKVWQ----ELSEKEKQVRPYPLISGDVGPYAAYLADGSEYTGNY-GQ 143
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKD 203
+ + L +HR ++ LV D LALETIP EA ALV+LL+ EFP +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 204 DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYP 261
T S G I L+ QI A+G+NC PS S+L++ I P V YP
Sbjct: 204 GTTISDGTAIEEVAE--LIDKASQILALGINCSSPSVYSSLLKKIADITDKPLV---TYP 258
Query: 262 NKGVKLLDG 270
N G ++ DG
Sbjct: 259 NSG-EVYDG 266
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 105/196 (53%), Gaps = 10/196 (5%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
+ +GPY L DGSEY+G+Y + + L +HR ++ LV D LALETIP EA
Sbjct: 121 SGDVGPYAAYLADGSEYTGNY-GQLDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEA 179
Query: 437 LALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
ALV+LL+ EFP +A++SF+ ++ T S G I L+ QI A+G+NC PS
Sbjct: 180 QALVELLQEEFPSVEAYMSFTAQNGTTISDGTAIEEVAE--LIDKASQILALGINCSSPS 237
Query: 496 HVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVN 552
S+L++ I P V YPN G V+D H W + D +++L W G
Sbjct: 238 VYSSLLKKIADITDKPLV---TYPNSGEVYDGQHQMWTQSADLSHTLLENTKIWHTFGAK 294
Query: 553 IIGGCCEVTSYEIQQM 568
++GGCC +I+ +
Sbjct: 295 VVGGCCRTRPNDIESL 310
>gi|377555946|ref|ZP_09785670.1| Homocysteine S-methyltransferase [Lactobacillus gastricus PS3]
gi|376168818|gb|EHS87544.1| Homocysteine S-methyltransferase [Lactobacillus gastricus PS3]
Length = 307
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 121/237 (51%), Gaps = 17/237 (7%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQ 90
LW++ L P+ H+ + AGA I + YQ NV K GY EQ A L+ S Q
Sbjct: 33 LWTAAALINHPDLVKRVHQAYFEAGARITITDSYQTNVAAFEKHGYGEQAARRLIRLSAQ 92
Query: 91 LMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADL 150
L +A+D+ + ++ NL+ G SIGPYG L DGSEY G Y ++ AD
Sbjct: 93 LAQTARDEYEKATGVH-----NLVAG------SIGPYGAYLADGSEYRGDY--ELSLADY 139
Query: 151 IAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFP-GQKAWLSFSCKDDTHTSH 209
+H P +E L+ AGVD LA+ET P E A++ L + W+SFS +D S
Sbjct: 140 QDFHAPRLEELLAAGVDCLAIETQPKLAEVTAILAWLHDHQISVPVWVSFSLQDPQTISE 199
Query: 210 GELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGVK 266
G ++ AV + + + + A+GVNC+ + + V I + +V IVYPN G +
Sbjct: 200 GTALTQAVEA--IQDDLNVLAVGVNCMPVTMATPAVETIAKV-ASVPIIVYPNSGAQ 253
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 104/197 (52%), Gaps = 6/197 (3%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A SIGPYG L DGSEY G Y ++ AD +H P +E L+ AGVD LA+ET P E
Sbjct: 112 AGSIGPYGAYLADGSEYRGDY--ELSLADYQDFHAPRLEELLAAGVDCLAIETQPKLAEV 169
Query: 437 LALVKLLREFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
A++ L + W+SFS +D S G ++ AV + + + + A+GVNC+ +
Sbjct: 170 TAILAWLHDHQISVPVWVSFSLQDPQTISEGTALTQAVEA--IQDDLNVLAVGVNCMPVT 227
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
+ V I + +V IVYPN G +D + W T + S W++ G IIG
Sbjct: 228 MATPAVETIAKV-ASVPIIVYPNSGAQYDPITKTWQTTTGQTSFAQAAVDWVQAGAGIIG 286
Query: 556 GCCEVTSYEIQQMRIMI 572
GCC +IQ++++ I
Sbjct: 287 GCCTTMPKDIQEIKLAI 303
>gi|408681500|ref|YP_006881327.1| Homocysteine S-methyltransferase [Streptomyces venezuelae ATCC
10712]
gi|328885829|emb|CCA59068.1| Homocysteine S-methyltransferase [Streptomyces venezuelae ATCC
10712]
Length = 307
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 127/260 (48%), Gaps = 28/260 (10%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG ++Q+ D LWS+ L PE H ++RAGA ++ +S YQA V
Sbjct: 17 VLDGGLSNQLEAQGCDLSDA--LWSARLLADGPEQIEAAHAAYVRAGARVLITSSYQATV 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ + G A LL +SV+L +A + + AAS+GPYG
Sbjct: 75 EGFARRGVGRAAAERLLARSVELARAAARGVRE---------------EVWVAASVGPYG 119
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
+L DGSEY G Y S+ E L A+HRP +E L A D LALET+P +EA AL++
Sbjct: 120 AMLADGSEYRGRYGLSVRE--LEAFHRPRIEVLAAAEPDVLALETVPDAEEAEALLRAA- 176
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E G WLS++ + T G+ ++ A + A DQ+ A+GVNC P+ V
Sbjct: 177 EGCGVPVWLSYTV-EGGRTRAGQDLAEAFA--VAAGNDQVVAVGVNCCDPAEAGAAVALA 233
Query: 249 KQ--SHPTVQTIVYPNKGVK 266
P V VYPN G +
Sbjct: 234 AAVTGRPGV---VYPNSGER 250
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 133/313 (42%), Gaps = 36/313 (11%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
G +LDG ++Q+ D LWS+ L PE H ++R +
Sbjct: 12 GDGALVLDGGLSNQLEAQGCDLSDA--LWSARLLADGPEQIEAAHAAYVRAGARVLITSS 69
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
TV ++ V L+A A R ++ + AAS+G
Sbjct: 70 YQATV----EGFARRGVGRAAAERLLARSVELARAAARG-------VREEV--WVAASVG 116
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG +L DGSEY G Y S+ E L A+HRP +E L A D LALET+P +EA AL++
Sbjct: 117 PYGAMLADGSEYRGRYGLSVRE--LEAFHRPRIEVLAAAEPDVLALETVPDAEEAEALLR 174
Query: 442 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
E G WLS++ + T G+ ++ A + A DQ+ A+GVNC P+ V
Sbjct: 175 AA-EGCGVPVWLSYTV-EGGRTRAGQDLAEAFA--VAAGNDQVVAVGVNCCDPAEAGAAV 230
Query: 502 RCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQ----WLEEGVNIIG 555
P V VYPN G WD+ W + + P W G ++G
Sbjct: 231 ALAAAVTGRPGV---VYPNSGERWDARARGW------RGAVAFDPALATGWAASGARLVG 281
Query: 556 GCCEVTSYEIQQM 568
GCC V I +
Sbjct: 282 GCCRVGPETIAAL 294
>gi|428182136|gb|EKX50998.1| hypothetical protein GUITHDRAFT_66436 [Guillardia theta CCMP2712]
Length = 327
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 129/265 (48%), Gaps = 16/265 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +Q+ R + D+ GH LWS+ L P +TH F AGAD++ S+ YQ V
Sbjct: 20 VLDGGQATQMEREGV-DLSGH-LWSARLLCDNPAMIKKTHVAFFLAGADVVVSASYQGTV 77
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G SE+E LL S+QL+ A+++ E D + G AS+G
Sbjct: 78 EGFKRAGMSEEEGKRLLRFSIQLIKEARNEAWEQMVKDGSSAGRIKPFAG-----ASVGC 132
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
Y L DGSEY+G +T +L +H ++ D A ETIP E A++ +
Sbjct: 133 YAASLADGSEYTGSSY-GITPEELRGFHLERLKLFAEEAPDVFAFETIPNMMEVEAIIDV 191
Query: 187 LRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
L + AW+S CKDD S E + + + + ++GVNCV P HV
Sbjct: 192 LNDPQILATNIPAWISVCCKDDETLSSDESVEE-FAKFVASRTRLLVSVGVNCVHPRHVE 250
Query: 243 TLVRCIKQSHPTVQTIVYPNKGVKL 267
++ ++ ++ + +VYPNKG K
Sbjct: 251 KILSTMR-AYCDLPLVVYPNKGEKF 274
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 140/318 (44%), Gaps = 30/318 (9%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG +Q+ R + D+ GH LWS+ L P +TH F + S GTV
Sbjct: 20 VLDGGQATQMEREGV-DLSGH-LWSARLLCDNPAMIKKTHVAFFLAGADVVVSASYQGTV 77
Query: 327 ---LRDG-SEYSGHY-----VDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA 377
R G SE G + + EA AW E +V+ G IKP
Sbjct: 78 EGFKRAGMSEEEGKRLLRFSIQLIKEARNEAW-----EQMVKDG-SSAGRIKPF----AG 127
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
AS+G Y L DGSEY+G +T +L +H ++ D A ETIP E
Sbjct: 128 ASVGCYAASLADGSEYTGSSY-GITPEELRGFHLERLKLFAEEAPDVFAFETIPNMMEVE 186
Query: 438 ALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
A++ +L + AW+S CKDD S E + + + + ++GVNCV
Sbjct: 187 AIIDVLNDPQILATNIPAWISVCCKDDETLSSDESVEE-FAKFVASRTRLLVSVGVNCVH 245
Query: 494 PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWL--DTEDEYSILHYVPQWLEEGV 551
P HV ++ ++ ++ + +VYPNKG +D+ +W+ D+ W G
Sbjct: 246 PRHVEKILSTMR-AYCDLPLVVYPNKGEKFDTARREWVPGTAMDDEDFCKLSDSWRANGA 304
Query: 552 NIIGGCCEVTSYEIQQMR 569
+IGGCC + I+ +R
Sbjct: 305 TMIGGCCRTSVDTIRLLR 322
>gi|58337299|ref|YP_193884.1| homocysteine methyltransferase [Lactobacillus acidophilus NCFM]
gi|227903885|ref|ZP_04021690.1| homocysteine methyltransferase [Lactobacillus acidophilus ATCC
4796]
gi|58254616|gb|AAV42853.1| homocysteine S-methyltransferase [Lactobacillus acidophilus NCFM]
gi|227868276|gb|EEJ75697.1| homocysteine methyltransferase [Lactobacillus acidophilus ATCC
4796]
Length = 310
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 150/305 (49%), Gaps = 21/305 (6%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ ++ + + + + LW++V L + + + H ++ + + A + T
Sbjct: 13 ILDGAMSTALEKQGVNT--NNDLWTAVALENDLDKVYKVHMNYFK----SGAQMTITNTY 66
Query: 327 LRDGSEYSGH-YVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGT 385
+ + H Y D T+ LI V+ +A DY + + AAS+GPYG
Sbjct: 67 QANVQAFKKHGYSDEHTKK-LIT---DAVQIAKKARDDYQT--QTGKHNWVAASVGPYGA 120
Query: 386 VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE 445
L DG E+ G Y S+T + +A+H P ++ L+ D LA+ET P E +A++ L+E
Sbjct: 121 YLSDGDEFRGDY--SLTPKEYLAFHLPRLKILLENKPDCLAIETQPKLDEVIAILDWLKE 178
Query: 446 FPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 504
+ Q +++F+ D T S G + + L +Q+ A+G NC +P +T + +
Sbjct: 179 YANQIPVYVTFTLHDTTKISDGTPLKKVMQK--LNEYEQVFAVGANCFKPFLATTAIDRM 236
Query: 505 KQ-SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
+ + T+ IVYPN GGV+D W+ + +W + G +IIGGCC +
Sbjct: 237 RMFTQKTI--IVYPNLGGVYDEFERNWIPFNADLDFTKLSKEWYKHGAHIIGGCCSTGTK 294
Query: 564 EIQQM 568
+IQQ+
Sbjct: 295 QIQQI 299
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 135/259 (52%), Gaps = 23/259 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ ++ + + + + LW++V L + + + H ++ ++GA + ++ YQANV
Sbjct: 13 ILDGAMSTALEKQGVNT--NNDLWTAVALENDLDKVYKVHMNYFKSGAQMTITNTYQANV 70
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG-HIETAASIGPY 127
K GYS++ L+ +VQ+ A+D + TG H AAS+GPY
Sbjct: 71 QAFKKHGYSDEHTKKLITDAVQIAKKARDD------------YQTQTGKHNWVAASVGPY 118
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DG E+ G Y S+T + +A+H P ++ L+ D LA+ET P E +A++ L
Sbjct: 119 GAYLSDGDEFRGDY--SLTPKEYLAFHLPRLKILLENKPDCLAIETQPKLDEVIAILDWL 176
Query: 188 REFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+E+ Q +++F+ D T S G + + L +Q+ A+G NC +P +T +
Sbjct: 177 KEYANQIPVYVTFTLHDTTKISDGTPLKKVMQK--LNEYEQVFAVGANCFKPFLATTAID 234
Query: 247 CIKQ-SHPTVQTIVYPNKG 264
++ + T+ IVYPN G
Sbjct: 235 RMRMFTQKTI--IVYPNLG 251
>gi|385817595|ref|YP_005853985.1| homocysteine methyltransferase [Lactobacillus amylovorus GRL1118]
gi|327183533|gb|AEA31980.1| homocysteine methyltransferase [Lactobacillus amylovorus GRL1118]
Length = 306
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 151/310 (48%), Gaps = 17/310 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ + ++ + ++ + LW++ L + H+D+ R E + V
Sbjct: 12 VLDGAMSDELEKQGVET--DNKLWTATALVDQLNKVYNAHQDYFRAGAELVITDTYQANV 69
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
E SG+ S EA+ + R V+ +A DY + + A +IG YG
Sbjct: 70 --QAFEESGY---SKKEAE--KFIRDAVKVAKKARDDYQK--ETGKYNYVAGTIGSYGAY 120
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-E 445
L DG+EY G Y +++E + + +H P ++ +++ D +ALET P E +A++ L
Sbjct: 121 LADGNEYRGDY--NLSEKEYLDFHLPRLKLVLKERPDLIALETQPKITEPVAVLNWLETN 178
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 505
+P ++SF+ KD H S G I A ++ Q+ AIG+NCV P V ++
Sbjct: 179 YPDMPIYVSFTLKDSKHVSDGTSIEHATQE--ISKYKQVFAIGINCVSPKLVDQALKEFA 236
Query: 506 QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
+ + + +VYPN G +D KW ++++ +W E+G ++IGGC EI
Sbjct: 237 K-YTSKPLVVYPNLGATYDPKIKKWRSFKEKFDFAELTQKWYEDGAHLIGGCRTTGPKEI 295
Query: 566 QQMRIMIDEF 575
+++R ID+
Sbjct: 296 KEIRQSIDKL 305
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 134/258 (51%), Gaps = 21/258 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ + ++ + ++ + LW++ L + H+D+ RAGA+++ + YQANV
Sbjct: 12 VLDGAMSDELEKQGVET--DNKLWTATALVDQLNKVYNAHQDYFRAGAELVITDTYQANV 69
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK-ENQTPDINLNKTFNLLTGHIETAASIGPY 127
+ GYS++EA + +V++ A+D + +T N A +IG Y
Sbjct: 70 QAFEESGYSKKEAEKFIRDAVKVAKKARDDYQKETGKYNY------------VAGTIGSY 117
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DG+EY G Y +++E + + +H P ++ +++ D +ALET P E +A++ L
Sbjct: 118 GAYLADGNEYRGDY--NLSEKEYLDFHLPRLKLVLKERPDLIALETQPKITEPVAVLNWL 175
Query: 188 R-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+P ++SF+ KD H S G I A ++ Q+ AIG+NCV P V ++
Sbjct: 176 ETNYPDMPIYVSFTLKDSKHVSDGTSIEHATQE--ISKYKQVFAIGINCVSPKLVDQALK 233
Query: 247 CIKQSHPTVQTIVYPNKG 264
+ + + +VYPN G
Sbjct: 234 EFAK-YTSKPLVVYPNLG 250
>gi|386587103|ref|YP_006083505.1| homocysteine S-methyltransferase [Streptococcus suis D12]
gi|353739249|gb|AER20257.1| homocysteine S-methyltransferase [Streptococcus suis D12]
Length = 315
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 143/250 (57%), Gaps = 15/250 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P+ + H+D+IRAGAD++ +S YQA + L ++G S+ EA +L
Sbjct: 30 DVSGK-LWSAKYLLENPQYIKDIHKDYIRAGADLVTTSTYQATFEGLAEVGLSQAEAEEL 88
Query: 85 LHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV 142
+ +V L A+D+ + + +T+ L++G +GPY L +G+EY+G Y
Sbjct: 89 IRLTVDLAKEARDEVWAELSEAEKVQRTYPLISG------DVGPYAAYLANGAEYTGDY- 141
Query: 143 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE-FPGQKAWLSFSC 201
+++ ++L +HR +E L+ + LALETIP EA ALV+LL E FP +A++SF+
Sbjct: 142 GNISLSELKDFHRRRIELLLEQEAELLALETIPNVLEAQALVELLAEDFPEAEAYISFTS 201
Query: 202 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 261
+D S G I + L+ + +QI A+G+NC PS + +++ + YP
Sbjct: 202 QDGQSISDGTSIEK--IAELVNSSEQILAVGLNCTAPSLYPAFLSQLREKTDK-PFVTYP 258
Query: 262 NKGVKLLDGS 271
N G ++ DG+
Sbjct: 259 NSG-EVYDGA 267
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 144/301 (47%), Gaps = 35/301 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMT 342
DV G LWS+ YL P+ + H+D+IR G L S Y + + +
Sbjct: 30 DVSGK-LWSAKYLLENPQYIKDIHKDYIRA-----------GADLVTTSTYQATF-EGLA 76
Query: 343 EADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-------------TAASIGPYGTVLRD 389
E L + E L+R VD + + ++ + +GPY L +
Sbjct: 77 EVGL---SQAEAEELIRLTVDLAKEARDEVWAELSEAEKVQRTYPLISGDVGPYAAYLAN 133
Query: 390 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE-FPG 448
G+EY+G Y +++ ++L +HR +E L+ + LALETIP EA ALV+LL E FP
Sbjct: 134 GAEYTGDY-GNISLSELKDFHRRRIELLLEQEAELLALETIPNVLEAQALVELLAEDFPE 192
Query: 449 QKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSH 508
+A++SF+ +D S G I + L+ + +QI A+G+NC PS + +++
Sbjct: 193 AEAYISFTSQDGQSISDGTSIEK--IAELVNSSEQILAVGLNCTAPSLYPAFLSQLREKT 250
Query: 509 PTVQTIVYPNKGGVWDSVHMKWLD-TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQ 567
+ YPN G V+D W + +D +S+L +W E G ++GGCC +I
Sbjct: 251 DK-PFVTYPNSGEVYDGATQTWKEKADDSHSLLDNTLEWHELGAKVVGGCCRTRPADIAD 309
Query: 568 M 568
+
Sbjct: 310 L 310
>gi|325068415|ref|ZP_08127088.1| homocysteine methyltransferase [Actinomyces oris K20]
Length = 308
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 144/313 (46%), Gaps = 22/313 (7%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAA 318
++G +LDG+ +++ + + LWS+ LTT P+ E H D++ I T
Sbjct: 6 DRGPVVLDGAMGTELDACGVDTRNA--LWSARALTTAPDVVREVHSDYLDAGARVITTNT 63
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAA 378
++R G + +G + A R EA + G ++ P A
Sbjct: 64 YQATLPALVRSGEDAAG------ARRVIAAGARLAKEAARQFGKEH-----PEEPVLVAG 112
Query: 379 SIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
+GPYG L DGSEY+G Y +D + + H P +E LV G+D ALET+P EA
Sbjct: 113 GLGPYGAYLADGSEYTGAYGIDILEDPGFQEVHLPRIEVLVGEGIDLFALETLPRLDEAR 172
Query: 438 ALVKLLREF-PGQKAWLSFSCKDDTHT-SHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
AL ++ P + W+SF + D T + G ++ A + A+GVNCV P
Sbjct: 173 ALASMVTGLAPQAQCWVSFQVRPDGATLADGTPLAEAAAWAEQEE--IVVAVGVNCVAPG 230
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
V+ + ++ + + YPN G ++D W T + I P W++ GV ++G
Sbjct: 231 VVARALPVLRAAT-RKPLVAYPNAGDLYDPATKTWQSTGEGAGIPELAPSWIDAGVRLVG 289
Query: 556 GCCEVTSYEIQQM 568
GCC +I+Q+
Sbjct: 290 GCCRTRPAQIRQL 302
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 124/260 (47%), Gaps = 20/260 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + + LWS+ LTT P+ E H D++ AGA +I ++ YQA +
Sbjct: 11 VLDGAMGTELDACGVDTRNA--LWSARALTTAPDVVREVHSDYLDAGARVITTNTYQATL 68
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMN-SAKDKENQTPDINLNKTFNLLTGHIETAASIGPY 127
L + G A ++ +L +A+ + P+ + A +GPY
Sbjct: 69 PALVRSGEDAAGARRVIAAGARLAKEAARQFGKEHPE-----------EPVLVAGGLGPY 117
Query: 128 GTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
G L DGSEY+G Y +D + + H P +E LV G+D ALET+P EA AL +
Sbjct: 118 GAYLADGSEYTGAYGIDILEDPGFQEVHLPRIEVLVGEGIDLFALETLPRLDEARALASM 177
Query: 187 LREF-PGQKAWLSFSCKDDTHT-SHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
+ P + W+SF + D T + G ++ A + A+GVNCV P V+
Sbjct: 178 VTGLAPQAQCWVSFQVRPDGATLADGTPLAEAAAWAEQEE--IVVAVGVNCVAPGVVARA 235
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
+ ++ + + YPN G
Sbjct: 236 LPVLRAAT-RKPLVAYPNAG 254
>gi|302555024|ref|ZP_07307366.1| homocysteine methyltransferase [Streptomyces viridochromogenes DSM
40736]
gi|302472642|gb|EFL35735.1| homocysteine methyltransferase [Streptomyces viridochromogenes DSM
40736]
Length = 303
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 138/262 (52%), Gaps = 34/262 (12%)
Query: 9 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG ++Q+ + H + D LWS+ L +PEA E H + RAGAD+ ++ YQA
Sbjct: 17 VLDGGMSNQLESAGHDLSD----ELWSARLLAEQPEAVTEAHLAYFRAGADVAITASYQA 72
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ K G + A +L+ SV+ SA++ Q ++ + AAS+GP
Sbjct: 73 TFEGFGKRGINPGRAAELMALSVE---SAREAAGQAG----------VSRPLWVAASVGP 119
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L DGSEY G Y +T +L +HRP +EAL A D LALET+P +EA AL++
Sbjct: 120 YGAMLADGSEYRGRY--GLTVDELERFHRPRMEALAAARPDVLALETVPDAEEAAALLRA 177
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV----S 242
+R G AWL++S + T G+ + A L A+ D++ A+GVNC P V +
Sbjct: 178 VRGL-GVPAWLTYSIAGGS-TRAGQPLEEAF--ALAADVDEVIAVGVNCCAPEDVDGAAA 233
Query: 243 TLVRCIKQSHPTVQTIVYPNKG 264
T R + ++YPN G
Sbjct: 234 TAARVTGKP-----VVIYPNSG 250
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 146/304 (48%), Gaps = 36/304 (11%)
Query: 264 GVKLLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
G +LDG ++Q+ + H + D LWS+ L +PEA E H + R + A +
Sbjct: 14 GTVVLDGGMSNQLESAGHDLSD----ELWSARLLAEQPEAVTEAHLAYFRAGADVAITAS 69
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNV-EALVRAGVDYLALIKPSISSQTAASI 380
T + ++ A+L+A + EA +AGV + AAS+
Sbjct: 70 YQATF----EGFGKRGINPGRAAELMALSVESAREAAGQAGVSRPLWV--------AASV 117
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GPYG +L DGSEY G Y +T +L +HRP +EAL A D LALET+P +EA AL+
Sbjct: 118 GPYGAMLADGSEYRGRY--GLTVDELERFHRPRMEALAAARPDVLALETVPDAEEAAALL 175
Query: 441 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV--- 497
+ +R G AWL++S + T G+ + A L A+ D++ A+GVNC P V
Sbjct: 176 RAVRGL-GVPAWLTYSIAGGS-TRAGQPLEEAF--ALAADVDEVIAVGVNCCAPEDVDGA 231
Query: 498 -STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556
+T R + ++YPN G W++ W T V W + G +IGG
Sbjct: 232 AATAARVTGKP-----VVIYPNSGETWNAEARAW--TGRSTFTPDQVKGWQQAGARLIGG 284
Query: 557 CCEV 560
CC V
Sbjct: 285 CCRV 288
>gi|253754499|ref|YP_003027640.1| homocysteine methyltransferase [Streptococcus suis P1/7]
gi|386578829|ref|YP_006075235.1| homocysteine methyltransferase [Streptococcus suis GZ1]
gi|386580898|ref|YP_006077303.1| homocysteine S-methyltransferase [Streptococcus suis JS14]
gi|386582981|ref|YP_006079385.1| homocysteine S-methyltransferase [Streptococcus suis SS12]
gi|386589102|ref|YP_006085503.1| homocysteine S-methyltransferase [Streptococcus suis A7]
gi|403062437|ref|YP_006650653.1| homocysteine methyltransferase [Streptococcus suis S735]
gi|251820745|emb|CAR47507.1| homocysteine S-methyltransferase [Streptococcus suis P1/7]
gi|292559292|gb|ADE32293.1| homocysteine methyltransferase [Streptococcus suis GZ1]
gi|319759090|gb|ADV71032.1| homocysteine S-methyltransferase [Streptococcus suis JS14]
gi|353735127|gb|AER16137.1| homocysteine S-methyltransferase [Streptococcus suis SS12]
gi|354986263|gb|AER45161.1| homocysteine S-methyltransferase [Streptococcus suis A7]
gi|402809763|gb|AFR01255.1| homocysteine methyltransferase [Streptococcus suis S735]
Length = 315
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 143/250 (57%), Gaps = 15/250 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P+ + H+D+IRAGAD++ +S YQA + L ++G S+ EA +L
Sbjct: 30 DVSGK-LWSAKYLLENPQYIKDIHKDYIRAGADLVTTSTYQATFEGLAEVGLSQAEAEEL 88
Query: 85 LHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV 142
+ +V L A+D+ + + +T+ L++G +GPY L +G+EY+G Y
Sbjct: 89 IRLTVDLAKEARDEVWAELSEAEKVQRTYPLISG------DVGPYAAYLANGAEYTGDY- 141
Query: 143 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE-FPGQKAWLSFSC 201
+++ ++L +HR +E L+ + LALETIP EA ALV+LL E FP +A++SF+
Sbjct: 142 GNISLSELKDFHRRRIELLLEQEAELLALETIPNVLEAQALVELLAEDFPEAEAYISFTS 201
Query: 202 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 261
+D S G I + L+ + +QI A+G+NC PS + +++ + YP
Sbjct: 202 QDGQSISDGTSIEK--IAELVNSSEQILAVGLNCTAPSLYPAFLSQLREKTDK-PFVTYP 258
Query: 262 NKGVKLLDGS 271
N G ++ DG+
Sbjct: 259 NSG-EVYDGA 267
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 144/301 (47%), Gaps = 35/301 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMT 342
DV G LWS+ YL P+ + H+D+IR G L S Y + + +
Sbjct: 30 DVSGK-LWSAKYLLENPQYIKDIHKDYIRA-----------GADLVTTSTYQATF-EGLA 76
Query: 343 EADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-------------TAASIGPYGTVLRD 389
E L + E L+R VD + + ++ + +GPY L +
Sbjct: 77 EVGL---SQAEAEELIRLTVDLAKEARDEVWAELSEAEKVQRTYPLISGDVGPYAAYLAN 133
Query: 390 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE-FPG 448
G+EY+G Y +++ ++L +HR +E L+ + LALETIP EA ALV+LL E FP
Sbjct: 134 GAEYTGDY-GNISLSELKDFHRRRIELLLEQEAELLALETIPNVLEAQALVELLAEDFPE 192
Query: 449 QKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSH 508
+A++SF+ +D S G I + L+ + +QI A+G+NC PS + +++
Sbjct: 193 AEAYISFTSQDGQSISDGTSIEK--IAELVNSSEQILAVGLNCTAPSLYPAFLSQLREKT 250
Query: 509 PTVQTIVYPNKGGVWDSVHMKWLD-TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQ 567
+ YPN G V+D W + +D +S+L +W E G ++GGCC +I
Sbjct: 251 DK-PFVTYPNSGEVYDGATQTWKEKADDSHSLLDNTLEWHELGAKVVGGCCRTRPADIAD 309
Query: 568 M 568
+
Sbjct: 310 L 310
>gi|302541970|ref|ZP_07294312.1| homocysteine S-methyltransferase [Streptomyces hygroscopicus ATCC
53653]
gi|302459588|gb|EFL22681.1| homocysteine S-methyltransferase [Streptomyces himastatinicus ATCC
53653]
Length = 306
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 127/256 (49%), Gaps = 21/256 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG ++Q+ D LWS+ L +P H ++RAGA ++ +S YQA
Sbjct: 19 VLDGGLSNQLEAQGCDLSD--ELWSARLLADDPGQIEAAHAAYVRAGARVLITSSYQATY 76
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G + ++A LL +SV+L A + AAS+GPYG
Sbjct: 77 EGFAHRGVAREDATALLGRSVELARGAARGAAAP------------AAPVWVAASVGPYG 124
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
+L DGSEY G Y ++ A+L +HRP +EALV AG D LALET+P EA A+++ +
Sbjct: 125 AMLADGSEYRGRY--GLSVAELERFHRPRIEALVAAGPDVLALETVPDADEAAAMLRAV- 181
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E G WLS+S + T G+ + A + A +Q+ A+G+NC P V
Sbjct: 182 EGSGVPVWLSYSIAGEA-TRAGQPLREAFA--VAAGNEQVIAVGINCCEPGDADRAVEIA 238
Query: 249 KQSHPTVQTIVYPNKG 264
++ +VYPN G
Sbjct: 239 AETTGK-PVVVYPNSG 253
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 100/192 (52%), Gaps = 13/192 (6%)
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG +L DGSEY G Y ++ A+L +HRP +EALV AG D LALET+P EA A
Sbjct: 119 SVGPYGAMLADGSEYRGRY--GLSVAELERFHRPRIEALVAAGPDVLALETVPDADEAAA 176
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
+++ + E G WLS+S + T G+ + A + A +Q+ A+G+NC P
Sbjct: 177 MLRAV-EGSGVPVWLSYSIAGEA-TRAGQPLREAFA--VAAGNEQVIAVGINCCEPGDAD 232
Query: 499 TLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW--LDTEDEYSILHYVPQWLEEGVNIIGG 556
V ++ +VYPN G WD+ W T D V W + G +IGG
Sbjct: 233 RAVEIAAETTGK-PVVVYPNSGEEWDATARSWRGRSTFDP----ARVKGWRDAGARLIGG 287
Query: 557 CCEVTSYEIQQM 568
CC V I ++
Sbjct: 288 CCRVGPDRIAEL 299
>gi|343522122|ref|ZP_08759088.1| homocysteine S-methyltransferase [Actinomyces sp. oral taxon 175
str. F0384]
gi|343401531|gb|EGV14037.1| homocysteine S-methyltransferase [Actinomyces sp. oral taxon 175
str. F0384]
Length = 308
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 141/313 (45%), Gaps = 22/313 (7%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAA 318
++G +LDG+ +++ I + LWS+ LTT P+ E H D++ I T
Sbjct: 6 DRGPVVLDGAMGTELDARGIDTRNA--LWSARALTTAPDVVREVHSDYLDAGARVITTNT 63
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAA 378
++ G + +G + A R L + + P A
Sbjct: 64 YQATLPALIHSGEDAAG------ARRVIAAGAR-----LAKGAARQFSKEHPEEPVLVAG 112
Query: 379 SIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
+GPYG L DGSEY+G Y +D + + H P +E +V G+D ALET+P EA
Sbjct: 113 GLGPYGAYLADGSEYTGTYGIDILEDPGFQEVHLPRIEVMVGEGLDLFALETLPRLDEAR 172
Query: 438 ALVKLLREF-PGQKAWLSFSCKDDTHT-SHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
AL ++ + P + W+SF + D T + G ++ A + A+G+NCV P
Sbjct: 173 ALASMVTDLAPQAQCWVSFQVRPDGSTLADGTPLAEAAAWAEQEE--IVVAVGINCVAPG 230
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
V+ + ++ + + YPN G ++D W T D I P W+ EGV ++G
Sbjct: 231 VVARALPVLRAATGK-PLVAYPNVGDLYDPATKTWQSTGDGAGIPELAPSWIAEGVRLVG 289
Query: 556 GCCEVTSYEIQQM 568
GCC +I+Q+
Sbjct: 290 GCCRTRPAQIRQL 302
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 124/260 (47%), Gaps = 20/260 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ I + LWS+ LTT P+ E H D++ AGA +I ++ YQA +
Sbjct: 11 VLDGAMGTELDARGIDTRNA--LWSARALTTAPDVVREVHSDYLDAGARVITTNTYQATL 68
Query: 69 DNLTKLGYSEQEALDLLHKSVQLM-NSAKDKENQTPDINLNKTFNLLTGHIETAASIGPY 127
L G A ++ +L +A+ + P+ + A +GPY
Sbjct: 69 PALIHSGEDAAGARRVIAAGARLAKGAARQFSKEHPE-----------EPVLVAGGLGPY 117
Query: 128 GTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
G L DGSEY+G Y +D + + H P +E +V G+D ALET+P EA AL +
Sbjct: 118 GAYLADGSEYTGTYGIDILEDPGFQEVHLPRIEVMVGEGLDLFALETLPRLDEARALASM 177
Query: 187 LREF-PGQKAWLSFSCKDDTHT-SHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
+ + P + W+SF + D T + G ++ A + A+G+NCV P V+
Sbjct: 178 VTDLAPQAQCWVSFQVRPDGSTLADGTPLAEAAAWAEQEE--IVVAVGINCVAPGVVARA 235
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
+ ++ + + YPN G
Sbjct: 236 LPVLRAAT-GKPLVAYPNVG 254
>gi|384567924|ref|ZP_10015028.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Saccharomonospora glauca
K62]
gi|384523778|gb|EIF00974.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Saccharomonospora glauca
K62]
Length = 294
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 128/260 (49%), Gaps = 29/260 (11%)
Query: 11 DGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
DG +++ H + D LWS+ L P+ V HR F AGA + ++ YQA+
Sbjct: 12 DGGLATELEARGHDLSDA----LWSARLLLDAPDEIVAAHRAFYEAGAVVATTASYQASF 67
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G E LLH+SV L A ++ + + + F AAS+GPYG
Sbjct: 68 PGFAERGLDRAETTRLLHRSVALARRAGEEFSG----DGRRRF--------VAASVGPYG 115
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y +T A L WH P +EAL A D LA+ET+P EA ALV L
Sbjct: 116 AALADGSEYRGDY--GLTVAQLRDWHLPRLEALAEAEPDLLAVETVPDVVEAEALVGALA 173
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
G AWL+++ + D T G+ ++ A+ PD + A+GVNC P+ V+ + C
Sbjct: 174 GL-GVPAWLTYTVEGD-RTRAGQPLAEALAV-AAEAPD-VVAVGVNCCAPTDVADAIACA 229
Query: 249 KQ--SHPTVQTIVYPNKGVK 266
+ P V VYPN G K
Sbjct: 230 RAVTDKPVV---VYPNSGEK 246
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 145/311 (46%), Gaps = 29/311 (9%)
Query: 262 NKGVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
+ G + DG +++ H + D LWS+ L P+ V HR F E A
Sbjct: 5 DGGPVVSDGGLATELEARGHDLSDA----LWSARLLLDAPDEIVAAHRAFY----EAGAV 56
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAAS 379
+ + ++ +D L+ HR +V RAG ++ + AAS
Sbjct: 57 VATTASYQASFPGFAERGLDRAETTRLL--HR-SVALARRAGEEFSGDGRRRF---VAAS 110
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
+GPYG L DGSEY G Y +T A L WH P +EAL A D LA+ET+P EA AL
Sbjct: 111 VGPYGAALADGSEYRGDY--GLTVAQLRDWHLPRLEALAEAEPDLLAVETVPDVVEAEAL 168
Query: 440 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
V L G AWL+++ + D T G+ ++ A+ PD + A+GVNC P+ V+
Sbjct: 169 VGALAGL-GVPAWLTYTVEGD-RTRAGQPLAEALAV-AAEAPD-VVAVGVNCCAPTDVAD 224
Query: 500 LVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557
+ C + P V VYPN G WD+ W S L QW+ G +IGGC
Sbjct: 225 AIACARAVTDKPVV---VYPNSGEKWDARRRAWTGPSRYSSELAR--QWVAAGARVIGGC 279
Query: 558 CEVTSYEIQQM 568
C V+ +I ++
Sbjct: 280 CRVSPADIAEV 290
>gi|146319678|ref|YP_001199390.1| homocysteine methyltransferase [Streptococcus suis 05ZYH33]
gi|146321872|ref|YP_001201583.1| homocysteine methyltransferase [Streptococcus suis 98HAH33]
gi|253752673|ref|YP_003025814.1| homocysteine methyltransferase [Streptococcus suis SC84]
gi|145690484|gb|ABP90990.1| putative methyltransferase [Streptococcus suis 05ZYH33]
gi|145692678|gb|ABP93183.1| putative methyltransferase [Streptococcus suis 98HAH33]
gi|251816962|emb|CAZ52611.1| homocysteine S-methyltransferase [Streptococcus suis SC84]
Length = 315
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 143/250 (57%), Gaps = 15/250 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P+ + H+D+IRAGAD++ +S YQA + L ++G S+ EA +L
Sbjct: 30 DVSGK-LWSAKYLLENPQYIKDIHKDYIRAGADLVTTSTYQATFEGLAEVGLSQAEAEEL 88
Query: 85 LHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV 142
+ +V L A+D+ + + +T+ L++G +GPY L +G+EY+G Y
Sbjct: 89 IRWTVDLAKEARDEVWAELSEAEKVQRTYPLISG------DVGPYAAYLANGAEYTGDY- 141
Query: 143 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE-FPGQKAWLSFSC 201
+++ ++L +HR +E L+ + LALETIP EA ALV+LL E FP +A++SF+
Sbjct: 142 GNISLSELKDFHRRRIELLLEQEAELLALETIPNVLEAQALVELLAEDFPEAEAYISFTS 201
Query: 202 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 261
+D S G I + L+ + +QI A+G+NC PS + +++ + YP
Sbjct: 202 QDGQSISDGTSIEK--IAELVNSSEQILAVGLNCTAPSLYPAFLSQLREKTDK-PFVTYP 258
Query: 262 NKGVKLLDGS 271
N G ++ DG+
Sbjct: 259 NSG-EVYDGA 267
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 144/301 (47%), Gaps = 35/301 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMT 342
DV G LWS+ YL P+ + H+D+IR G L S Y + + +
Sbjct: 30 DVSGK-LWSAKYLLENPQYIKDIHKDYIRA-----------GADLVTTSTYQATF-EGLA 76
Query: 343 EADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-------------TAASIGPYGTVLRD 389
E L + E L+R VD + + ++ + +GPY L +
Sbjct: 77 EVGL---SQAEAEELIRWTVDLAKEARDEVWAELSEAEKVQRTYPLISGDVGPYAAYLAN 133
Query: 390 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE-FPG 448
G+EY+G Y +++ ++L +HR +E L+ + LALETIP EA ALV+LL E FP
Sbjct: 134 GAEYTGDY-GNISLSELKDFHRRRIELLLEQEAELLALETIPNVLEAQALVELLAEDFPE 192
Query: 449 QKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSH 508
+A++SF+ +D S G I + L+ + +QI A+G+NC PS + +++
Sbjct: 193 AEAYISFTSQDGQSISDGTSIEK--IAELVNSSEQILAVGLNCTAPSLYPAFLSQLREKT 250
Query: 509 PTVQTIVYPNKGGVWDSVHMKWLD-TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQ 567
+ YPN G V+D W + +D +S+L +W E G ++GGCC +I
Sbjct: 251 DK-PFVTYPNSGEVYDGATQTWKEKADDSHSLLDNTLEWHELGAKVVGGCCRTRPADIAD 309
Query: 568 M 568
+
Sbjct: 310 L 310
>gi|84494560|ref|ZP_00993679.1| homocysteine methyltransferase [Janibacter sp. HTCC2649]
gi|84384053|gb|EAP99933.1| homocysteine methyltransferase [Janibacter sp. HTCC2649]
Length = 305
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 149/312 (47%), Gaps = 36/312 (11%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
+ G +LDG F++ + D+ G LWS+ L P V HR F+ E S
Sbjct: 19 HTGPVVLDGGFSTALEARG-HDLSGR-LWSARLLRQAPSEVVAAHRTFVDAGAEIVISAS 76
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
+ ++G+ +TE + A ++E L R G D AL+ AAS+G
Sbjct: 77 YQ-------ASHAGYVAAGLTEEECDADLDASIE-LARQGADGRALV--------AASVG 120
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG L DGSEY+G+ +++ A L +H +E L+ AG D +A+ETIP EA +V+
Sbjct: 121 PYGAHLADGSEYTGY--PAVSRATLREFHSRRLERLIAAGPDLVAVETIPEVAEAEVVVE 178
Query: 442 LLREF-PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 500
LL E P W+SFS + G + A+ A A+GVNC P H+ L
Sbjct: 179 LLTEIAPDLPYWVSFSATGGGRLTGGAPFAEAIGVVRGAA----IAVGVNCTAPRHIDEL 234
Query: 501 VRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVP----QWLEEGVNIIGG 556
++ P V ++YPN G +D W TED + H+ P +W + G IGG
Sbjct: 235 ---LEAGGPNVPYVIYPNAGATYDPGSKTW--TEDGSA--HFAPTTVQRWNDLGARFIGG 287
Query: 557 CCEVTSYEIQQM 568
CC + + I+++
Sbjct: 288 CCGIGADGIREI 299
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 127/266 (47%), Gaps = 30/266 (11%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG F++ + D+ G LWS+ L P V HR F+ AGA+I+ S+ YQA+
Sbjct: 24 VLDGGFSTALEARG-HDLSGR-LWSARLLRQAPSEVVAAHRTFVDAGAEIVISASYQASH 81
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G +E+E L S++L D G AAS+GPYG
Sbjct: 82 AGYVAAGLTEEECDADLDASIELARQGAD------------------GRALVAASVGPYG 123
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY+G+ +++ A L +H +E L+ AG D +A+ETIP EA +V+LL
Sbjct: 124 AHLADGSEYTGY--PAVSRATLREFHSRRLERLIAAGPDLVAVETIPEVAEAEVVVELLT 181
Query: 189 EF-PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
E P W+SFS + G + A+ A A+GVNC P H+ L
Sbjct: 182 EIAPDLPYWVSFSATGGGRLTGGAPFAEAIGVVRGAA----IAVGVNCTAPRHIDEL--- 234
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFT 273
++ P V ++YPN G GS T
Sbjct: 235 LEAGGPNVPYVIYPNAGATYDPGSKT 260
>gi|365926087|ref|ZP_09448850.1| homocysteine methyltransferase [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|420265034|ref|ZP_14767624.1| homocysteine methyltransferase [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|394429067|gb|EJF01533.1| homocysteine methyltransferase [Lactobacillus mali KCTC 3596 = DSM
20444]
Length = 307
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 138/307 (44%), Gaps = 27/307 (8%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ + + + LWS+ L P+ H+++ + + A + T
Sbjct: 16 VLDGAMATELEKAGVDT--ANELWSATALLDAPQKITAVHQEYFKAGADIAITNTYQAT- 72
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT----AASIGP 382
++ AD AL++ V + S A SIGP
Sbjct: 73 -------KQAFMKQGISAD-------ESSALIKQAVFCAQEAREKASGNKKLLLAGSIGP 118
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L +GSEY+G Y S+ +H P ++AL AG D A+ET P E A+ +L
Sbjct: 119 YGAFLANGSEYTGDYHLSIKA--FQDFHYPRMQALFEAGADLFAIETQPNFVELEAITEL 176
Query: 443 L-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
L R+F AW++ S KD+ G + V L + I AIGVNC +++ +
Sbjct: 177 LERKFSKMTAWVALSIKDNKKLCDGTPLKKVVK--YLDQFESISAIGVNCTAMENITPAL 234
Query: 502 RCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVT 561
I S T IVYPN G ++D + KW + VP W++ G IIGGCC T
Sbjct: 235 NEI-HSLTTKPLIVYPNNGDIYDPISKKWQVNDKAQKFSDLVPTWVKSGAKIIGGCCRTT 293
Query: 562 SYEIQQM 568
+I+++
Sbjct: 294 PDDIREI 300
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 135/286 (47%), Gaps = 21/286 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K+ +LDG+ +++ + + + LWS+ L P+ H+++ +AGADI ++ YQ
Sbjct: 13 KLLVLDGAMATELEKAGVDT--ANELWSATALLDAPQKITAVHQEYFKAGADIAITNTYQ 70
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
A K G S E+ L+ ++V A++K + + L A SIG
Sbjct: 71 ATKQAFMKQGISADESSALIKQAVFCAQEAREKASGNKKLLL-------------AGSIG 117
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG L +GSEY+G Y S+ +H P ++AL AG D A+ET P E A+ +
Sbjct: 118 PYGAFLANGSEYTGDYHLSIKA--FQDFHYPRMQALFEAGADLFAIETQPNFVELEAITE 175
Query: 186 LL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
LL R+F AW++ S KD+ G + V L + I AIGVNC +++
Sbjct: 176 LLERKFSKMTAWVALSIKDNKKLCDGTPLKKVVK--YLDQFESISAIGVNCTAMENITPA 233
Query: 245 VRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLW 290
+ I S T IVYPN G S QV+ K D P W
Sbjct: 234 LNEI-HSLTTKPLIVYPNNGDIYDPISKKWQVNDKAQKFSDLVPTW 278
>gi|302557562|ref|ZP_07309904.1| homocysteine S-methyltransferase [Streptomyces griseoflavus Tu4000]
gi|302475180|gb|EFL38273.1| homocysteine S-methyltransferase [Streptomyces griseoflavus Tu4000]
Length = 312
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 127/261 (48%), Gaps = 26/261 (9%)
Query: 6 KVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+V +LDG ++Q++ H + D LWS+ L +PEA H + AGAD+ ++
Sbjct: 23 RVLVLDGGMSNQLAAAGHDLSD----ELWSARLLAEDPEAVTAAHLAYFEAGADVAITAS 78
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
YQA + + G +EA LL SV+ + ++ + AAS
Sbjct: 79 YQATFEGFARRGIGREEAGRLLALSVECART-------------AARRARVSRPLWVAAS 125
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG +L DGSEY G Y + A+L +HRP +E L AG D LALETIP EA AL
Sbjct: 126 VGPYGAMLADGSEYRGRY--GLNVAELERFHRPRMEVLAAAGPDVLALETIPDADEAEAL 183
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
++ LR G AWLS+S D T G+ L A D++ A+GVNC P
Sbjct: 184 LRALRGL-GVPAWLSYSVSGD-RTRAGQ--PLEEALALAARADEVIAVGVNCCTPDDADH 239
Query: 244 LVRCIKQSHPTVQTIVYPNKG 264
+ + +VYPN G
Sbjct: 240 AI-ALAARVTGKPVVVYPNSG 259
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 130/298 (43%), Gaps = 26/298 (8%)
Query: 265 VKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
V +LDG ++Q++ H + D LWS+ L +PEA H + + A +
Sbjct: 24 VLVLDGGMSNQLAAAGHDLSD----ELWSARLLAEDPEAVTAAHLAYFEAGADVAITASY 79
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
T ++ + L+A V + S AAS+GP
Sbjct: 80 QATF----EGFARRGIGREEAGRLLALS-------VECARTAARRARVSRPLWVAASVGP 128
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG +L DGSEY G Y + A+L +HRP +E L AG D LALETIP EA AL++
Sbjct: 129 YGAMLADGSEYRGRY--GLNVAELERFHRPRMEVLAAAGPDVLALETIPDADEAEALLRA 186
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
LR G AWLS+S D T G+ L A D++ A+GVNC P +
Sbjct: 187 LRGL-GVPAWLSYSVSGD-RTRAGQ--PLEEALALAARADEVIAVGVNCCTPDDADHAI- 241
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEV 560
+ +VYPN G WD+ W T V W E G +IGGCC V
Sbjct: 242 ALAARVTGKPVVVYPNSGETWDAGARAW--TGRATFSAGQVKGWRESGARLIGGCCRV 297
>gi|118466904|ref|YP_880942.1| homocysteine methyltransferase [Mycobacterium avium 104]
gi|118168191|gb|ABK69088.1| homocysteine S-methyltransferase [Mycobacterium avium 104]
Length = 291
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 128/258 (49%), Gaps = 29/258 (11%)
Query: 9 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
LLDG +++ H + D PLWS+ L P+ H + RAGA I ++ YQA
Sbjct: 2 LLDGGLATELEARGHDLSD----PLWSARLLADAPQEIGAVHAAYFRAGAMIATTASYQA 57
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G S + LL +SV+L +A+D+ + G++ AAS+GP
Sbjct: 58 SFEGFAARGISRSDTAGLLRRSVELAKAARDEAG-------------VAGYV--AASVGP 102
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y S+ + L WHRP +E L A D LA ETIP EA ALV L
Sbjct: 103 YGAALADGSEYRGRYGLSVRQ--LEDWHRPRLEVLADADADVLAAETIPDVDEAEALVNL 160
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R G AWLS++ D HT G+ ++ A A +I A GVNC P V +
Sbjct: 161 VRSL-GVPAWLSYTI-DGAHTRAGQPLADAFAVAAGA--PEIVAFGVNCCAPDDVLPAIG 216
Query: 247 CIKQSHPTVQTIVYPNKG 264
+ V IVYPN G
Sbjct: 217 PARAVGKPV--IVYPNSG 232
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 138/305 (45%), Gaps = 31/305 (10%)
Query: 267 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
LLDG +++ H + D PLWS+ L P+ H + R A
Sbjct: 2 LLDGGLATELEARGHDLSD----PLWSARLLADAPQEIGAVHAAYFRAGAMIA------- 50
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
T + + G ++ +D R +VE L +A D + ++ AAS+GPYG
Sbjct: 51 TTASYQASFEGFAARGISRSDTAGLLRRSVE-LAKAARD-----EAGVAGYVAASVGPYG 104
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
L DGSEY G Y S+ + L WHRP +E L A D LA ETIP EA ALV L+R
Sbjct: 105 AALADGSEYRGRYGLSVRQ--LEDWHRPRLEVLADADADVLAAETIPDVDEAEALVNLVR 162
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 504
G AWLS++ D HT G+ ++ A A +I A GVNC P V +
Sbjct: 163 SL-GVPAWLSYTI-DGAHTRAGQPLADAFAVAAGA--PEIVAFGVNCCAPDDVLPAIGPA 218
Query: 505 KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYE 564
+ V IVYPN G WD W + L QW+ G I+GGCC V +
Sbjct: 219 RAVGKPV--IVYPNSGEHWDG--RAWTGRSKFSAEL--ASQWISAGARIVGGCCRVRPTD 272
Query: 565 IQQMR 569
I +R
Sbjct: 273 IAAVR 277
>gi|377575362|ref|ZP_09804356.1| homocysteine S-methyltransferase [Mobilicoccus pelagius NBRC
104925]
gi|377535939|dbj|GAB49521.1| homocysteine S-methyltransferase [Mobilicoccus pelagius NBRC
104925]
Length = 319
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 143/310 (46%), Gaps = 27/310 (8%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAASIGP 322
V + DG +Q+ +D LWS+ L +PEA VE H F+R I T AS
Sbjct: 20 VWVADGGLATQLEAMGHDLID--ALWSARLLHDDPEAIVEAHLHFLRAGARIVTTASY-- 75
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
+G +G D T+ + R +V+ L R VD + + AAS+GP
Sbjct: 76 --QATDEGFAAAGMDADETTQ-----FLRRSVD-LAREAVDR-HVADGGTRALVAASVGP 126
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR----AGVDYLALETIPAEKEALA 438
YG +L DGSEY G Y +T ADL +H V+ L G D LALETIP E +A
Sbjct: 127 YGAMLADGSEYRGRY--GLTVADLREFHARRVDVLAGEVADGGADLLALETIPDVDEVVA 184
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
L LL G W+S + + T G+ ++ AV + ++ AIG NC P V
Sbjct: 185 LTDLL-GAAGVPGWVSCTVEAG-RTRAGQPLADAVAAAADTG--EVVAIGANCCAPRDVE 240
Query: 499 TLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
++ + + +VYPN G WD+ W T + + L P W+E G I+GGCC
Sbjct: 241 AVLDAVATAGRGRPAVVYPNSGEGWDARARTWTGTGTDLAAL--APGWVEAGARIVGGCC 298
Query: 559 EVTSYEIQQM 568
V I +
Sbjct: 299 RVGPDRIAAL 308
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 125/263 (47%), Gaps = 23/263 (8%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V + DG +Q+ +D LWS+ L +PEA VE H F+RAGA I+ ++ YQ
Sbjct: 19 EVWVADGGLATQLEAMGHDLID--ALWSARLLHDDPEAIVEAHLHFLRAGARIVTTASYQ 76
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
A + G E L +SV L A D+ + T L+ AAS+G
Sbjct: 77 ATDEGFAAAGMDADETTQFLRRSVDLAREAVDRH-----VADGGTRALV------AASVG 125
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR----AGVDYLALETIPAEKEAL 181
PYG +L DGSEY G Y +T ADL +H V+ L G D LALETIP E +
Sbjct: 126 PYGAMLADGSEYRGRY--GLTVADLREFHARRVDVLAGEVADGGADLLALETIPDVDEVV 183
Query: 182 ALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 241
AL LL G W+S + + T G+ ++ AV + ++ AIG NC P V
Sbjct: 184 ALTDLL-GAAGVPGWVSCTVEAG-RTRAGQPLADAVAAAADTG--EVVAIGANCCAPRDV 239
Query: 242 STLVRCIKQSHPTVQTIVYPNKG 264
++ + + +VYPN G
Sbjct: 240 EAVLDAVATAGRGRPAVVYPNSG 262
>gi|302523430|ref|ZP_07275772.1| homocysteine methyltransferase [Streptomyces sp. SPB78]
gi|302432325|gb|EFL04141.1| homocysteine methyltransferase [Streptomyces sp. SPB78]
Length = 304
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 145/306 (47%), Gaps = 37/306 (12%)
Query: 267 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+LDG ++++ + H + D LWS+ L EP A E HR + E A +
Sbjct: 24 VLDGGLSNELEAAGHGLADA----LWSARLLRDEPAALTEAHRAYA----EAGAEVATTA 75
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
+ ++ H +D+ +L+A +V A AG S AAS+GPYG
Sbjct: 76 SYQASFEGFARHGIDAARTRELLAL---SVTAARAAG-----------SRWVAASVGPYG 121
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
+L DGSEY G Y + A L +H P VEAL+ AG D LALET+P +EA AL+ ++R
Sbjct: 122 AMLADGSEYRGRY--GVGRAALERFHGPRVEALLAAGPDVLALETVPDAEEARALLAVVR 179
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR-- 502
G WLS+S D T G+ + +A L A +++ A+GVNC P V+ VR
Sbjct: 180 GC-GVPVWLSYSVADG-RTWAGQPLDAAFG--LAAEAEEVVAVGVNCCEPLEVADAVRRA 235
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTS 562
P V YPN G WD+ W D + +W G ++GGCC V
Sbjct: 236 VAVSGKPGV---AYPNSGERWDAHARGW--RSDPSFVPELAARWYAAGARLVGGCCRVGP 290
Query: 563 YEIQQM 568
I+ +
Sbjct: 291 DGIRGV 296
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 130/265 (49%), Gaps = 37/265 (13%)
Query: 6 KVKLLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+ +LDG ++++ + H + D LWS+ L EP A E HR + AGA++ ++
Sbjct: 21 RAVVLDGGLSNELEAAGHGLADA----LWSARLLRDEPAALTEAHRAYAEAGAEVATTAS 76
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
YQA+ + + G +LL SV +A G AAS
Sbjct: 77 YQASFEGFARHGIDAARTRELLALSVTAARAA--------------------GSRWVAAS 116
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG +L DGSEY G Y + A L +H P VEAL+ AG D LALET+P +EA AL
Sbjct: 117 VGPYGAMLADGSEYRGRY--GVGRAALERFHGPRVEALLAAGPDVLALETVPDAEEARAL 174
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
+ ++R G WLS+S D T G+ + +A L A +++ A+GVNC P V+
Sbjct: 175 LAVVRGC-GVPVWLSYSVADG-RTWAGQPLDAAFG--LAAEAEEVVAVGVNCCEPLEVAD 230
Query: 244 LVR--CIKQSHPTVQTIVYPNKGVK 266
VR P V YPN G +
Sbjct: 231 AVRRAVAVSGKPGV---AYPNSGER 252
>gi|422854197|ref|ZP_16900861.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK160]
gi|325696433|gb|EGD38323.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK160]
Length = 315
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 138/264 (52%), Gaps = 20/264 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ +LDG+ +++ DV G LWS+ YL +P+ + H ++RAG+DII +S YQ
Sbjct: 12 EIIILDGALGTELESLGY-DVSGK-LWSAQYLLDQPQIIQDMHESYVRAGSDIITTSSYQ 69
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAAS 123
A++ + G + ++ DLL ++V L A + +P+ + L+ G S
Sbjct: 70 ASIPAFIEAGLTSEKGYDLLKETVFLAQKAIENVWTGLSPEEQKQRPCPLVAG------S 123
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP-AEKEALA 182
+GPY L DGSEY+G+Y ++E + +HRP ++AL+ AG D LA+ETIP + A
Sbjct: 124 VGPYAAYLADGSEYTGNY--QLSEEEYRDFHRPRIQALLEAGSDLLAIETIPNGAEAAAL 181
Query: 183 LVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
L L EFP +A+LSF + + S G I L Q A+G NC P ++
Sbjct: 182 LRLLAEEFPQAEAYLSFVAQSENAISDGTKIEE--LGNLAQESPQALAVGFNCTAPHLIA 239
Query: 243 TLVRCIKQ--SHPTVQTIVYPNKG 264
L+ + Q + P + YPN G
Sbjct: 240 PLLDRLGQVCNKP---FLTYPNSG 260
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 147/318 (46%), Gaps = 35/318 (11%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ +LDG+ +++ DV G LWS+ YL +P+ + H ++R G
Sbjct: 13 IIILDGALGTELESLGY-DVSGK-LWSAQYLLDQPQIIQDMHESYVRA-----------G 59
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWH-----RPNVEALVRAGVDYLALIKPSISSQ---- 375
+ + S Y + + EA L + + V +A + + P Q
Sbjct: 60 SDIITTSSYQAS-IPAFIEAGLTSEKGYDLLKETVFLAQKAIENVWTGLSPEEQKQRPCP 118
Query: 376 -TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP-AE 433
A S+GPY L DGSEY+G+Y ++E + +HRP ++AL+ AG D LA+ETIP
Sbjct: 119 LVAGSVGPYAAYLADGSEYTGNY--QLSEEEYRDFHRPRIQALLEAGSDLLAIETIPNGA 176
Query: 434 KEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
+ A L L EFP +A+LSF + + S G I L Q A+G NC
Sbjct: 177 EAAALLRLLAEEFPQAEAYLSFVAQSENAISDGTKIEE--LGNLAQESPQALAVGFNCTA 234
Query: 494 PSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEG 550
P ++ L+ + Q + P + YPN G ++ + W D E E S+L W E+G
Sbjct: 235 PHLIAPLLDRLGQVCNKP---FLTYPNSGETYNGLTKTWHDDPEQERSLLENSKLWQEQG 291
Query: 551 VNIIGGCCEVTSYEIQQM 568
V + GGCC +I Q+
Sbjct: 292 VRLFGGCCRTRPEDIAQL 309
>gi|256843183|ref|ZP_05548671.1| homocysteine methyltransferase [Lactobacillus crispatus 125-2-CHN]
gi|293380962|ref|ZP_06626994.1| homocysteine S-methyltransferase [Lactobacillus crispatus 214-1]
gi|423318721|ref|ZP_17296598.1| hypothetical protein HMPREF9250_01063 [Lactobacillus crispatus
FB049-03]
gi|256614603|gb|EEU19804.1| homocysteine methyltransferase [Lactobacillus crispatus 125-2-CHN]
gi|290922459|gb|EFD99429.1| homocysteine S-methyltransferase [Lactobacillus crispatus 214-1]
gi|405593369|gb|EKB66819.1| hypothetical protein HMPREF9250_01063 [Lactobacillus crispatus
FB049-03]
Length = 329
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 138/314 (43%), Gaps = 17/314 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ ++ + + I + LW+++ L + H ++ + + A + T
Sbjct: 13 ILDGAMSTALEKLGIDT--NNELWTAIALEHNLAQIYQVHMNYFKAGAQMAIT----DTY 66
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+ + H LI N + + D A I + AAS+GPYG
Sbjct: 67 QANIPAFEKHGFTQDQATKLIT----NAVQIAKKARDDFAKT-TGIHNYVAASVGPYGAY 121
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE- 445
L G E+ G Y S+T + + +H P ++ L+ D LALET P E +A++ L+E
Sbjct: 122 LAQGDEFRGDY--SLTTEEYLNFHLPRLKILLANKPDCLALETQPKLDEVVAILDWLKEN 179
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 505
P ++SF+ D T S G + V L DQ+ AIG NC +P + ++ I
Sbjct: 180 APEFPVYVSFTLHDTTKISDGTPLKRVVQK--LNEYDQVFAIGANCFKPFLATAVIDKI- 236
Query: 506 QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
Q ++YPN GGV++ W+ ++ +W E G IIGGCC T EI
Sbjct: 237 HDFTDKQIVIYPNLGGVYNEFERNWIPFNAKFDFKKLSQEWYEHGARIIGGCCSTTEKEI 296
Query: 566 QQMRIMIDEFNTKK 579
Q+ N K
Sbjct: 297 GQISAFFKTINNTK 310
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 127/257 (49%), Gaps = 19/257 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ ++ + + I + LW+++ L + H ++ +AGA + + YQAN+
Sbjct: 13 ILDGAMSTALEKLGIDT--NNELWTAIALEHNLAQIYQVHMNYFKAGAQMAITDTYQANI 70
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
K G+++ +A L+ +VQ+ A+D +T I H AAS+GPYG
Sbjct: 71 PAFEKHGFTQDQATKLITNAVQIAKKARDDFAKTTGI-----------HNYVAASVGPYG 119
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L G E+ G Y S+T + + +H P ++ L+ D LALET P E +A++ L+
Sbjct: 120 AYLAQGDEFRGDY--SLTTEEYLNFHLPRLKILLANKPDCLALETQPKLDEVVAILDWLK 177
Query: 189 E-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
E P ++SF+ D T S G + V L DQ+ AIG NC +P + ++
Sbjct: 178 ENAPEFPVYVSFTLHDTTKISDGTPLKRVVQK--LNEYDQVFAIGANCFKPFLATAVIDK 235
Query: 248 IKQSHPTVQTIVYPNKG 264
I Q ++YPN G
Sbjct: 236 I-HDFTDKQIVIYPNLG 251
>gi|227878574|ref|ZP_03996499.1| homocysteine methyltransferase [Lactobacillus crispatus JV-V01]
gi|256850218|ref|ZP_05555647.1| homocysteine methyltransferase [Lactobacillus crispatus MV-1A-US]
gi|262046390|ref|ZP_06019352.1| homocysteine methyltransferase [Lactobacillus crispatus MV-3A-US]
gi|295692940|ref|YP_003601550.1| homocysteine s-methyltransferase [Lactobacillus crispatus ST1]
gi|312977407|ref|ZP_07789155.1| homocysteine S-methyltransferase [Lactobacillus crispatus CTV-05]
gi|423321643|ref|ZP_17299514.1| hypothetical protein HMPREF9249_01514 [Lactobacillus crispatus
FB077-07]
gi|227861831|gb|EEJ69425.1| homocysteine methyltransferase [Lactobacillus crispatus JV-V01]
gi|256712855|gb|EEU27847.1| homocysteine methyltransferase [Lactobacillus crispatus MV-1A-US]
gi|260573261|gb|EEX29819.1| homocysteine methyltransferase [Lactobacillus crispatus MV-3A-US]
gi|295031046|emb|CBL50525.1| Homocysteine S-methyltransferase [Lactobacillus crispatus ST1]
gi|310895838|gb|EFQ44904.1| homocysteine S-methyltransferase [Lactobacillus crispatus CTV-05]
gi|405593312|gb|EKB66763.1| hypothetical protein HMPREF9249_01514 [Lactobacillus crispatus
FB077-07]
Length = 329
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 138/314 (43%), Gaps = 17/314 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ ++ + + I + LW+++ L + H ++ + + A + T
Sbjct: 13 ILDGAMSTALEKLGIDT--NNELWTAIALEHNLAQIYQVHMNYFKAGAQMAIT----DTY 66
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
+ + H LI N + + D A I + AAS+GPYG
Sbjct: 67 QANIPAFEKHGFTQDQATKLIT----NAVQIAKKARDDFAKT-TGIHNYVAASVGPYGAY 121
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE- 445
L G E+ G Y S+T + + +H P ++ L+ D LALET P E +A++ L+E
Sbjct: 122 LAQGDEFRGDY--SLTTEEYLNFHLPRLKILLANKPDCLALETQPKLDEVVAILDWLKEN 179
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 505
P ++SF+ D T S G + V L DQ+ AIG NC +P + ++ I
Sbjct: 180 APEIPVYVSFTLHDTTKISDGTPLKRVVQK--LNEYDQVFAIGANCFKPFLATAVIDKI- 236
Query: 506 QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
Q ++YPN GGV++ W+ ++ +W E G IIGGCC T EI
Sbjct: 237 HDFTDKQIVIYPNLGGVYNEFERNWIPFNAKFDFKKLSQEWYEHGARIIGGCCSTTEKEI 296
Query: 566 QQMRIMIDEFNTKK 579
Q+ N K
Sbjct: 297 GQISAFFKTINNAK 310
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 127/257 (49%), Gaps = 19/257 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ ++ + + I + LW+++ L + H ++ +AGA + + YQAN+
Sbjct: 13 ILDGAMSTALEKLGIDT--NNELWTAIALEHNLAQIYQVHMNYFKAGAQMAITDTYQANI 70
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
K G+++ +A L+ +VQ+ A+D +T I H AAS+GPYG
Sbjct: 71 PAFEKHGFTQDQATKLITNAVQIAKKARDDFAKTTGI-----------HNYVAASVGPYG 119
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L G E+ G Y S+T + + +H P ++ L+ D LALET P E +A++ L+
Sbjct: 120 AYLAQGDEFRGDY--SLTTEEYLNFHLPRLKILLANKPDCLALETQPKLDEVVAILDWLK 177
Query: 189 E-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
E P ++SF+ D T S G + V L DQ+ AIG NC +P + ++
Sbjct: 178 ENAPEIPVYVSFTLHDTTKISDGTPLKRVVQK--LNEYDQVFAIGANCFKPFLATAVIDK 235
Query: 248 IKQSHPTVQTIVYPNKG 264
I Q ++YPN G
Sbjct: 236 I-HDFTDKQIVIYPNLG 251
>gi|357605017|gb|EHJ64431.1| putative translin-associated factor X interacting protein 1 isoform
4 [Danaus plexippus]
Length = 695
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 86/167 (51%), Gaps = 14/167 (8%)
Query: 409 WHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGEL 468
WHRP +EAL+ AGVD LALET+P KEA L +++ + AW++FSCKDD GE
Sbjct: 4 WHRPRIEALIDAGVDILALETMPCGKEAEMLASMIKNYAQIPAWITFSCKDDRSLVDGED 63
Query: 469 ISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQS-HPTVQTIVYPNKGGV----- 522
+ C NP+Q+ IGVNC P V L + I + P + + YPN G
Sbjct: 64 FQTVAQRCWEINPEQLIGIGVNCCSPKVVGNLFKDISKGIEPPLSLVTYPNSGEKYTEEG 123
Query: 523 WDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMR 569
W LDT YV WL+ V +GGCC + +I Q+R
Sbjct: 124 WGERDCDSLDT--------YVHDWLDLNVKFVGGCCRTYAEDIAQIR 162
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 153 WHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGEL 212
WHRP +EAL+ AGVD LALET+P KEA L +++ + AW++FSCKDD GE
Sbjct: 4 WHRPRIEALIDAGVDILALETMPCGKEAEMLASMIKNYAQIPAWITFSCKDDRSLVDGED 63
Query: 213 ISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQS-HPTVQTIVYPNKGVK 266
+ C NP+Q+ IGVNC P V L + I + P + + YPN G K
Sbjct: 64 FQTVAQRCWEINPEQLIGIGVNCCSPKVVGNLFKDISKGIEPPLSLVTYPNSGEK 118
>gi|289768223|ref|ZP_06527601.1| homocysteine methyltransferase [Streptomyces lividans TK24]
gi|289698422|gb|EFD65851.1| homocysteine methyltransferase [Streptomyces lividans TK24]
Length = 304
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 122/260 (46%), Gaps = 27/260 (10%)
Query: 9 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG ++Q+ + H + D LWS+ L +PEA H + AGA++ +S YQA
Sbjct: 15 VLDGGLSNQLEAAGHDLGDA----LWSARLLAEDPEAITRAHLAYFEAGAEVAITSSYQA 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G + A +LL SV + + AAS GP
Sbjct: 71 TFEGFARRGIGRERAAELLALSVA----------SAREAARRARTARPERALWVAASAGP 120
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L DGSEY G Y + L +HRP +E L A D LALET+P EA AL++
Sbjct: 121 YGAMLADGSEYRGRY--GLGRGALERFHRPRLEVLAAARPDVLALETVPDTDEAAALLRA 178
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R AWLS++ D T G+ + A L A+ D++ A+GVNC P VS V
Sbjct: 179 VRGLD-VPAWLSYTVAGD-RTRAGQPLDEAF--ALAADADEVIAVGVNCCAPEDVSGAVE 234
Query: 247 CIKQ--SHPTVQTIVYPNKG 264
+ P V YPN G
Sbjct: 235 TAARVTGKPVV---AYPNSG 251
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 134/301 (44%), Gaps = 27/301 (8%)
Query: 264 GVKLLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
G +LDG ++Q+ + H + D LWS+ L +PEA H + E A +
Sbjct: 12 GPLVLDGGLSNQLEAAGHDLGDA----LWSARLLAEDPEAITRAHLAYFEAGAEVAITSS 67
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
T ++ + A+L+A + +P + AAS G
Sbjct: 68 YQATF----EGFARRGIGRERAAELLALSVASAREAA----RRARTARPERALWVAASAG 119
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG +L DGSEY G Y + L +HRP +E L A D LALET+P EA AL++
Sbjct: 120 PYGAMLADGSEYRGRY--GLGRGALERFHRPRLEVLAAARPDVLALETVPDTDEAAALLR 177
Query: 442 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
+R AWLS++ D T G+ + A L A+ D++ A+GVNC P VS V
Sbjct: 178 AVRGLD-VPAWLSYTVAGD-RTRAGQPLDEAF--ALAADADEVIAVGVNCCAPEDVSGAV 233
Query: 502 RCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
+ P V YPN G WD+ W Y+ V W E G ++GGCC
Sbjct: 234 ETAARVTGKPVV---AYPNSGETWDARSRGW-RGRSSYTA-ERVRDWWERGARLVGGCCR 288
Query: 560 V 560
V
Sbjct: 289 V 289
>gi|227893550|ref|ZP_04011355.1| Homocysteine S-methyltransferase [Lactobacillus ultunensis DSM
16047]
gi|227864648|gb|EEJ72069.1| Homocysteine S-methyltransferase [Lactobacillus ultunensis DSM
16047]
Length = 322
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 131/258 (50%), Gaps = 21/258 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ + ++ + ++ + LW++ L + H+D+ RAGA+++ + YQANV
Sbjct: 28 VLDGAMSDELEKQGVET--DNKLWTATALVDQLNKVYNAHQDYFRAGAELVITDTYQANV 85
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG-HIETAASIGPY 127
+ GYSE+EA + +V++ A+D + TG H A +IG Y
Sbjct: 86 QAFEEAGYSEKEAEKFIKNAVKIAKKARD------------DYQKETGKHNYVAGTIGSY 133
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK-L 186
G L DG+EY G Y +++E + + +H P ++ ++ D +ALET P E +A++ L
Sbjct: 134 GAFLADGNEYRGEY--NLSEKEYLDFHLPRLKLVLEEKPDLIALETQPKITEPVAVLNWL 191
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+ ++SF+ KD H S G I A ++ Q+ AIG+NCV P V ++
Sbjct: 192 QKNHSNIPVYVSFTLKDTKHISDGTSIEQATQE--VSKYKQVFAIGINCVSPKLVDQALK 249
Query: 247 CIKQSHPTVQTIVYPNKG 264
+ + +VYPN G
Sbjct: 250 EFAK-YTAKPLVVYPNLG 266
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 145/316 (45%), Gaps = 29/316 (9%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ + ++ + ++ + LW++ L + H+D+ R E V
Sbjct: 28 VLDGAMSDELEKQGVET--DNKLWTATALVDQLNKVYNAHQDYFRAGAEL---------V 76
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT------AASI 380
+ D + + V + EA + E ++ V + +T A +I
Sbjct: 77 ITDTYQAN---VQAFEEA---GYSEKEAEKFIKNAVKIAKKARDDYQKETGKHNYVAGTI 130
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
G YG L DG+EY G Y +++E + + +H P ++ ++ D +ALET P E +A++
Sbjct: 131 GSYGAFLADGNEYRGEY--NLSEKEYLDFHLPRLKLVLEEKPDLIALETQPKITEPVAVL 188
Query: 441 KLL-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
L + ++SF+ KD H S G I A ++ Q+ AIG+NCV P V
Sbjct: 189 NWLQKNHSNIPVYVSFTLKDTKHISDGTSIEQATQE--VSKYKQVFAIGINCVSPKLVDQ 246
Query: 500 LVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
++ + + +VYPN G +D KW ++++ +W E+G +IGGCC
Sbjct: 247 ALKEFAK-YTAKPLVVYPNLGATYDPKIKKWRSFKEKFDFAELTQKWYEDGARLIGGCCT 305
Query: 560 VTSYEIQQMRIMIDEF 575
EI+++R ID+
Sbjct: 306 TGPKEIKEIRQSIDKL 321
>gi|225432746|ref|XP_002283054.1| PREDICTED: homocysteine S-methyltransferase 3 isoform 2 [Vitis
vinifera]
Length = 303
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 131/277 (47%), Gaps = 36/277 (12%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG +++ RH D PLWS+ L P+ H D++ AGA II ++ YQA +
Sbjct: 24 VIDGGLATELERHGADLND--PLWSATCLIHSPDLIRRVHLDYLEAGASIIITASYQATI 81
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G S +EA LL +SV++ A+D ++ K L I AAS+G YG
Sbjct: 82 QGFEAKGLSREEAEVLLRRSVEIACEARDIYHE----RCAKGTCLEQRPILVAASVGSYG 137
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEYSGHY ++T L +HR V+ L +G D +A ETIP + EA K+
Sbjct: 138 AYLADGSEYSGHYGAAVTLETLKDFHRRRVQVLAESGADLIAFETIPNKLEA----KVSG 193
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+ + A ++ SCK Q+ A+G+NC P + L+ I
Sbjct: 194 DSLIECASIADSCK------------------------QVVAVGINCTPPRFIHGLILLI 229
Query: 249 KQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD 285
Q T ++YPN G + DG V ++D D
Sbjct: 230 -QKVTTKPVVIYPNSG-ETYDGVRKEWVKSSGVQDGD 264
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 152/334 (45%), Gaps = 52/334 (15%)
Query: 253 PTVQT-IVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIR 311
PT + + G ++DG +++ RH D PLWS+ L P+ H D++
Sbjct: 9 PTFMADFIRQSGGYAVIDGGLATELERHGADLND--PLWSATCLIHSPDLIRRVHLDYL- 65
Query: 312 GHIETAASI---GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA-GVDYLAL 367
E ASI Y ++ G E G S EA+++ R +VE A + +
Sbjct: 66 ---EAGASIIITASYQATIQ-GFEAKGL---SREEAEVLL--RRSVEIACEARDIYHERC 116
Query: 368 IKPSISSQ----TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 423
K + Q AAS+G YG L DGSEYSGHY ++T L +HR V+ L +G D
Sbjct: 117 AKGTCLEQRPILVAASVGSYGAYLADGSEYSGHYGAAVTLETLKDFHRRRVQVLAESGAD 176
Query: 424 YLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQ 483
+A ETIP + EA K+ + + A ++ SCK Q
Sbjct: 177 LIAFETIPNKLEA----KVSGDSLIECASIADSCK------------------------Q 208
Query: 484 IQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE--DEYSILH 541
+ A+G+NC P + L+ I Q T ++YPN G +D V +W+ + + +
Sbjct: 209 VVAVGINCTPPRFIHGLILLI-QKVTTKPVVIYPNSGETYDGVRKEWVKSSGVQDGDFVS 267
Query: 542 YVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEF 575
YV +W E G ++ GGCC + + I+ + + + +
Sbjct: 268 YVSKWREAGASLFGGCCRTSPHTIRAISMTLSSY 301
>gi|291436474|ref|ZP_06575864.1| homocysteine methyltransferase [Streptomyces ghanaensis ATCC 14672]
gi|291339369|gb|EFE66325.1| homocysteine methyltransferase [Streptomyces ghanaensis ATCC 14672]
Length = 304
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 125/258 (48%), Gaps = 26/258 (10%)
Query: 9 LLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG ++Q++ H + D LWS+ L +PEA H + AGAD+ ++ YQA
Sbjct: 18 VLDGGMSNQLASAGHDLSD----ELWSARLLAEDPEAVTAAHLAYFEAGADVAITASYQA 73
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G A +LL SV+ A + + + AAS+GP
Sbjct: 74 TFEGFARRGIGRGRAAELLALSVECAREAARRARAARPLWV-------------AASVGP 120
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L DGSEY G Y ++ A+L +HRP E L A D LALETIP EA AL+++
Sbjct: 121 YGAMLADGSEYRGRY--GLSVAELERFHRPRTEVLAAARPDVLALETIPDTDEAEALLRV 178
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
LR G AWLS+S D T G+ + A A+ ++ A+GVNC P V
Sbjct: 179 LRGL-GTPAWLSYSAAGD-RTRAGQPLEDAFALAADAD--EVIAVGVNCCTPEDADRAV- 233
Query: 247 CIKQSHPTVQTIVYPNKG 264
+ +VYPN G
Sbjct: 234 ALAARVTGKPVVVYPNSG 251
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 136/307 (44%), Gaps = 26/307 (8%)
Query: 264 GVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
G +LDG ++Q++ H + D LWS+ L +PEA H + + A +
Sbjct: 15 GTVVLDGGMSNQLASAGHDLSD----ELWSARLLAEDPEAVTAAHLAYFEAGADVAITAS 70
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
T ++ + A+L+A V + + + AAS+G
Sbjct: 71 YQATF----EGFARRGIGRGRAAELLALS-------VECAREAARRARAARPLWVAASVG 119
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG +L DGSEY G Y ++ A+L +HRP E L A D LALETIP EA AL++
Sbjct: 120 PYGAMLADGSEYRGRY--GLSVAELERFHRPRTEVLAAARPDVLALETIPDTDEAEALLR 177
Query: 442 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
+LR G AWLS+S D T G+ + A A+ ++ A+GVNC P V
Sbjct: 178 VLRGL-GTPAWLSYSAAGD-RTRAGQPLEDAFALAADAD--EVIAVGVNCCTPEDADRAV 233
Query: 502 RCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVT 561
+ +VYPN G WD+ W T V W E G ++GGCC V
Sbjct: 234 -ALAARVTGKPVVVYPNSGETWDTGARAW--TGRPTFTAGRVAGWRESGARLVGGCCRVG 290
Query: 562 SYEIQQM 568
I +
Sbjct: 291 PETISAI 297
>gi|326773711|ref|ZP_08232994.1| homocysteine S-methyltransferase [Actinomyces viscosus C505]
gi|326636941|gb|EGE37844.1| homocysteine S-methyltransferase [Actinomyces viscosus C505]
Length = 325
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 140/314 (44%), Gaps = 26/314 (8%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAAS 319
+G +LDG+ +++ + + LWS+ LT P+ E H D++ I T
Sbjct: 24 RGPVVLDGAMGTELDARGVDTRNA--LWSARALTMAPDVVREVHSDYLDAGARVITTNTY 81
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAAS 379
++R G + +G + A R L + + P A
Sbjct: 82 QATLPALVRSGEDAAG------ARRVIAAGAR-----LAKEAARQFSKEHPEEPVLVAGG 130
Query: 380 IGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
+GPYG L DGSEY+G Y +D + + H P +E L G+D ALET+P EA A
Sbjct: 131 LGPYGAYLADGSEYTGAYGIDILEDPGFQEVHLPRIEVLAGEGIDLFALETLPRLDEARA 190
Query: 439 LVKLLREF-PGQKAWLSFSCKDDTHT-SHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
L +++ P + W+SF + D T + G ++ A + A+G+NCV P
Sbjct: 191 LASMVKGLAPQAECWVSFQVRPDGATLADGTPLAEAAAWAAQEE--IVVAVGINCVAPGV 248
Query: 497 VSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554
V+ + ++ + P V YPN G ++D W T D I P W++ GV ++
Sbjct: 249 VARALPVLRAVTNKPLV---AYPNAGDLYDPATKTWQSTGDGAGIPELAPSWIDAGVRLV 305
Query: 555 GGCCEVTSYEIQQM 568
GGCC +I+Q+
Sbjct: 306 GGCCRTRPAQIRQL 319
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 124/262 (47%), Gaps = 24/262 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + + LWS+ LT P+ E H D++ AGA +I ++ YQA +
Sbjct: 28 VLDGAMGTELDARGVDTRNA--LWSARALTMAPDVVREVHSDYLDAGARVITTNTYQATL 85
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMN-SAKDKENQTPDINLNKTFNLLTGHIETAASIGPY 127
L + G A ++ +L +A+ + P+ + A +GPY
Sbjct: 86 PALVRSGEDAAGARRVIAAGARLAKEAARQFSKEHPE-----------EPVLVAGGLGPY 134
Query: 128 GTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
G L DGSEY+G Y +D + + H P +E L G+D ALET+P EA AL +
Sbjct: 135 GAYLADGSEYTGAYGIDILEDPGFQEVHLPRIEVLAGEGIDLFALETLPRLDEARALASM 194
Query: 187 LREF-PGQKAWLSFSCKDDTHT-SHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
++ P + W+SF + D T + G ++ A + A+G+NCV P V+
Sbjct: 195 VKGLAPQAECWVSFQVRPDGATLADGTPLAEAAAWAAQEE--IVVAVGINCVAPGVVARA 252
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ ++ + P V YPN G
Sbjct: 253 LPVLRAVTNKPLV---AYPNAG 271
>gi|32141288|ref|NP_733689.1| homocysteine methyltransferase [Streptomyces coelicolor A3(2)]
gi|24413901|emb|CAD55372.1| putative transferase [Streptomyces coelicolor A3(2)]
Length = 304
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 122/260 (46%), Gaps = 27/260 (10%)
Query: 9 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG ++Q+ + H + D LWS+ L +PEA H + AGA++ +S YQA
Sbjct: 15 VLDGGLSNQLEAAGHDLGDA----LWSARLLAEDPEAITRAHLAYFEAGAEVAITSSYQA 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G + A +LL SV + + AAS GP
Sbjct: 71 TFEGFARRGIGRERAAELLALSVA----------SAREAARRARTARPERALWVAASAGP 120
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L DGSEY G Y + L +HRP +E L A D LALET+P EA AL++
Sbjct: 121 YGAMLADGSEYRGRY--GLGRGALERFHRPRLEVLAAARPDVLALETVPDTDEAAALLRA 178
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R AWLS++ D T G+ + A L A+ D++ A+GVNC P VS V
Sbjct: 179 VRGLD-VPAWLSYTVAGD-RTRAGQPLDEAF--ALAADVDEVIAVGVNCCAPEDVSGAVE 234
Query: 247 CIKQ--SHPTVQTIVYPNKG 264
+ P V YPN G
Sbjct: 235 TAARVTGKPVV---AYPNSG 251
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 134/301 (44%), Gaps = 27/301 (8%)
Query: 264 GVKLLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
G +LDG ++Q+ + H + D LWS+ L +PEA H + E A +
Sbjct: 12 GPLVLDGGLSNQLEAAGHDLGDA----LWSARLLAEDPEAITRAHLAYFEAGAEVAITSS 67
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
T ++ + A+L+A + +P + AAS G
Sbjct: 68 YQATF----EGFARRGIGRERAAELLALSVASAREAA----RRARTARPERALWVAASAG 119
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG +L DGSEY G Y + L +HRP +E L A D LALET+P EA AL++
Sbjct: 120 PYGAMLADGSEYRGRY--GLGRGALERFHRPRLEVLAAARPDVLALETVPDTDEAAALLR 177
Query: 442 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
+R AWLS++ D T G+ + A L A+ D++ A+GVNC P VS V
Sbjct: 178 AVRGLD-VPAWLSYTVAGD-RTRAGQPLDEAF--ALAADVDEVIAVGVNCCAPEDVSGAV 233
Query: 502 RCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
+ P V YPN G WD+ W Y+ V W E G ++GGCC
Sbjct: 234 ETAARVTGKPVV---AYPNSGETWDAKSRGW-RGRSSYTA-ERVRDWRERGARLVGGCCR 288
Query: 560 V 560
V
Sbjct: 289 V 289
>gi|336054181|ref|YP_004562468.1| homocysteine methyltransferase [Lactobacillus kefiranofaciens ZW3]
gi|333957558|gb|AEG40366.1| Homocysteine methyltransferase [Lactobacillus kefiranofaciens ZW3]
Length = 330
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 149/319 (46%), Gaps = 18/319 (5%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
N+G+ ++DG+ ++ + I + LW+++ L + + + H + + A +
Sbjct: 9 NRGL-IIDGAMSTALEHEEIDT--NNDLWTAIALEKDLDKIYQVHLKYFKA----GAQLA 61
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
T + + H A +IA V+ +A DY ++ I + A S+G
Sbjct: 62 ITDTYQANVQAFVKHGFTKKQAATMIA---NAVKVAKKARDDYE--VQTGIHNFVAGSVG 116
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
YG L DG E+ G Y S+T+ + +H P + ++ D LA+ET P E +A++
Sbjct: 117 SYGAYLADGDEFRGDY--SLTDRQYLDFHLPRLRVILANQPDCLAIETQPKLDEPVAILN 174
Query: 442 LLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 500
L+E P ++SF+ D T S G + A+ L + DQ+ A+GVNC +P +
Sbjct: 175 WLKENTPTIPVYVSFTLHDTTKISDGTPLKKAMQK--LNDYDQVFAVGVNCFKPFLATAA 232
Query: 501 VRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEV 560
+ +++ Q +VYPN GGV++ W+ ++ +W E G +IGGCC
Sbjct: 233 IDKMRE-FTDKQIVVYPNLGGVYNEFERNWIPFNAKFDFKKLSQEWYEHGARMIGGCCST 291
Query: 561 TSYEIQQMRIMIDEFNTKK 579
EI Q+ +++K
Sbjct: 292 GVKEISQIAAFFKTIHSQK 310
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 131/258 (50%), Gaps = 21/258 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG+ ++ + I + LW+++ L + + + H + +AGA + + YQANV
Sbjct: 13 IIDGAMSTALEHEEIDT--NNDLWTAIALEKDLDKIYQVHLKYFKAGAQLAITDTYQANV 70
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG-HIETAASIGPY 127
K G+++++A ++ +V++ A+D + + TG H A S+G Y
Sbjct: 71 QAFVKHGFTKKQAATMIANAVKVAKKARDD------------YEVQTGIHNFVAGSVGSY 118
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DG E+ G Y S+T+ + +H P + ++ D LA+ET P E +A++ L
Sbjct: 119 GAYLADGDEFRGDY--SLTDRQYLDFHLPRLRVILANQPDCLAIETQPKLDEPVAILNWL 176
Query: 188 RE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+E P ++SF+ D T S G + A+ L + DQ+ A+GVNC +P + +
Sbjct: 177 KENTPTIPVYVSFTLHDTTKISDGTPLKKAMQK--LNDYDQVFAVGVNCFKPFLATAAID 234
Query: 247 CIKQSHPTVQTIVYPNKG 264
+++ Q +VYPN G
Sbjct: 235 KMRE-FTDKQIVVYPNLG 251
>gi|315038240|ref|YP_004031808.1| homocysteine methyltransferase [Lactobacillus amylovorus GRL 1112]
gi|312276373|gb|ADQ59013.1| homocysteine methyltransferase [Lactobacillus amylovorus GRL 1112]
Length = 331
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 149/320 (46%), Gaps = 18/320 (5%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
+KG+ +LDG+ ++ + + I LW++V L + + + H ++ + + A +
Sbjct: 9 SKGL-VLDGAMSTALEKQGIDT--NTDLWTAVALDKDLDKVYKVHMNYFQAGAQMAITDT 65
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
V E G+ D E +IA V+ +A D+ K I + AAS+G
Sbjct: 66 YQANV--QAFEKHGYSEDKAKE--MIA---DAVKIAKKARDDFEK--KTGIHNYVAASVG 116
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG L G E+ G Y +T+ + +H P ++ L++ D LA+ET P E + L+
Sbjct: 117 PYGAYLAKGDEFRGDY--DLTKKQYLDFHLPRLQVLLQNKPDCLAIETQPKLDEVVVLLD 174
Query: 442 LLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 500
L+E P ++SF+ D T S G + + + DQ+ A+G NC +P +T
Sbjct: 175 WLKENAPEMPVYVSFTLHDTTKISDGTPLKKVMEK--INEYDQVFAVGANCFKPFLATTA 232
Query: 501 VRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEV 560
+ +++ IVYPN GGV++ W+ ++ +W E G IIGGCC
Sbjct: 233 IDKMRE-FTKKNIIVYPNLGGVYNEFERNWIPFNAKFDFGKLSKEWYEHGACIIGGCCST 291
Query: 561 TSYEIQQMRIMIDEFNTKKN 580
EI Q+ N +K+
Sbjct: 292 GVKEISQIAAFYKILNNQKS 311
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 129/258 (50%), Gaps = 21/258 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ ++ + + I LW++V L + + + H ++ +AGA + + YQANV
Sbjct: 13 VLDGAMSTALEKQGIDT--NTDLWTAVALDKDLDKVYKVHMNYFQAGAQMAITDTYQANV 70
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG-HIETAASIGPY 127
K GYSE +A +++ +V++ A+D F TG H AAS+GPY
Sbjct: 71 QAFEKHGYSEDKAKEMIADAVKIAKKARD------------DFEKKTGIHNYVAASVGPY 118
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L G E+ G Y +T+ + +H P ++ L++ D LA+ET P E + L+ L
Sbjct: 119 GAYLAKGDEFRGDY--DLTKKQYLDFHLPRLQVLLQNKPDCLAIETQPKLDEVVVLLDWL 176
Query: 188 RE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+E P ++SF+ D T S G + + + DQ+ A+G NC +P +T +
Sbjct: 177 KENAPEMPVYVSFTLHDTTKISDGTPLKKVMEK--INEYDQVFAVGANCFKPFLATTAID 234
Query: 247 CIKQSHPTVQTIVYPNKG 264
+++ IVYPN G
Sbjct: 235 KMRE-FTKKNIIVYPNLG 251
>gi|253756432|ref|YP_003029572.1| homocysteine methyltransferase [Streptococcus suis BM407]
gi|251818896|emb|CAZ56739.1| homocysteine S-methyltransferase [Streptococcus suis BM407]
Length = 315
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 141/250 (56%), Gaps = 15/250 (6%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV G LWS+ YL P+ + H+D+IRAGAD++ +S YQA + L ++G S+ EA +L
Sbjct: 30 DVSGK-LWSAKYLLENPQYIKDIHKDYIRAGADLVTTSTYQATFEGLAEVGLSQAEAEEL 88
Query: 85 LHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV 142
+ +V L A+D+ + + +T+ L++G +GPY L +G+EY+G Y
Sbjct: 89 IRLTVDLAKEARDEVWAELSEAEKVQRTYPLISG------DVGPYAAYLANGAEYTGDY- 141
Query: 143 DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE-FPGQKAWLSFSC 201
+++ ++L +H +E L+ + LALETIP EA ALV+LL E FP +A++SF+
Sbjct: 142 GNISLSELKDFHCRRIELLLEQEAELLALETIPNVLEAQALVELLAEDFPEAEAYISFTS 201
Query: 202 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 261
+D S G I L+ + +QI A+G+NC PS + +++ + YP
Sbjct: 202 QDGQSISDGTSIEKIAE--LVNSSEQILAVGLNCTAPSLYPAFLSQLREKTDK-PFVTYP 258
Query: 262 NKGVKLLDGS 271
N G ++ DG+
Sbjct: 259 NSG-EVYDGA 267
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 142/301 (47%), Gaps = 35/301 (11%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMT 342
DV G LWS+ YL P+ + H+D+IR G L S Y + + +
Sbjct: 30 DVSGK-LWSAKYLLENPQYIKDIHKDYIRA-----------GADLVTTSTYQATF-EGLA 76
Query: 343 EADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-------------TAASIGPYGTVLRD 389
E L + E L+R VD + + ++ + +GPY L +
Sbjct: 77 EVGL---SQAEAEELIRLTVDLAKEARDEVWAELSEAEKVQRTYPLISGDVGPYAAYLAN 133
Query: 390 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE-FPG 448
G+EY+G Y +++ ++L +H +E L+ + LALETIP EA ALV+LL E FP
Sbjct: 134 GAEYTGDY-GNISLSELKDFHCRRIELLLEQEAELLALETIPNVLEAQALVELLAEDFPE 192
Query: 449 QKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSH 508
+A++SF+ +D S G I L+ + +QI A+G+NC PS + +++
Sbjct: 193 AEAYISFTSQDGQSISDGTSIEKIAE--LVNSSEQILAVGLNCTAPSLYPAFLSQLREKT 250
Query: 509 PTVQTIVYPNKGGVWDSVHMKWLD-TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQ 567
+ YPN G V+D W + +D +S+L +W E G ++GGCC +I
Sbjct: 251 DK-PFVTYPNSGEVYDGATQTWKEKADDSHSLLDNTLEWHELGAKVVGGCCRTRPADIAD 309
Query: 568 M 568
+
Sbjct: 310 L 310
>gi|115482070|ref|NP_001064628.1| Os10g0422200 [Oryza sativa Japonica Group]
gi|31432147|gb|AAP53817.1| Homocysteine S-methyltransferase 2, putative, expressed [Oryza
sativa Japonica Group]
gi|113639237|dbj|BAF26542.1| Os10g0422200 [Oryza sativa Japonica Group]
gi|125531969|gb|EAY78534.1| hypothetical protein OsI_33628 [Oryza sativa Indica Group]
gi|125574831|gb|EAZ16115.1| hypothetical protein OsJ_31561 [Oryza sativa Japonica Group]
gi|215686685|dbj|BAG88938.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215716981|dbj|BAG95344.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737310|dbj|BAG96239.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 335
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 135/272 (49%), Gaps = 33/272 (12%)
Query: 9 LLDGSFTSQVSRHT--IKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
++DG +++ + +KD LWS+ L T P+ + H D++ AGA ++ + YQA
Sbjct: 24 VIDGGLATELEANGADLKDA----LWSARCLFTCPDLIRKVHLDYLEAGASVLITGSYQA 79
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAK--------DKENQTPDINLNKTFNLLTGHI 118
+ G+S++E+ L +SV+L A+ + ++ D+ + +L
Sbjct: 80 TIQGFLSKGFSQEESESFLRRSVELACEARAIYLEKCSNGSDEAKDVTKYRKRPILI--- 136
Query: 119 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 178
AAS+G YG L DGSEYSG Y + T L +H ++ L AG D + ETIP +
Sbjct: 137 --AASVGSYGAYLADGSEYSGDYGNEGTLEFLKNFHLRRLQVLAEAGPDVIVFETIPNKI 194
Query: 179 EALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVN 234
E A V+LL E + AW F+ KD + G+ + +S SC ++ A+G+N
Sbjct: 195 ETQAYVELLEECKLRIPAWFGFTSKDGVNVVSGDSLIECASIADSC-----KEVAAVGIN 249
Query: 235 CVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKG 264
C P + LV I++ S P ++YPN G
Sbjct: 250 CTPPRFIHELVLSIRKVTSKP---ILIYPNSG 278
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 149/325 (45%), Gaps = 51/325 (15%)
Query: 264 GVKLLDGSFTSQVSRHT--IKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASI- 320
G ++DG +++ + +KD LWS+ L T P+ + H D++ E AS+
Sbjct: 21 GAAVIDGGLATELEANGADLKDA----LWSARCLFTCPDLIRKVHLDYL----EAGASVL 72
Query: 321 --GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--- 375
G Y ++ G ++ + ++ R +VE A YL K S S
Sbjct: 73 ITGSYQATIQ------GFLSKGFSQEESESFLRRSVELACEARAIYLE--KCSNGSDEAK 124
Query: 376 -----------TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY 424
AAS+G YG L DGSEYSG Y + T L +H ++ L AG D
Sbjct: 125 DVTKYRKRPILIAASVGSYGAYLADGSEYSGDYGNEGTLEFLKNFHLRRLQVLAEAGPDV 184
Query: 425 LALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLAN 480
+ ETIP + E A V+LL E + AW F+ KD + G+ + +S SC
Sbjct: 185 IVFETIPNKIETQAYVELLEECKLRIPAWFGFTSKDGVNVVSGDSLIECASIADSC---- 240
Query: 481 PDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTE--DE 536
++ A+G+NC P + LV I++ S P ++YPN G +D + +W++
Sbjct: 241 -KEVAAVGINCTPPRFIHELVLSIRKVTSKP---ILIYPNSGESYDPIRKEWVECSGISN 296
Query: 537 YSILHYVPQWLEEGVNIIGGCCEVT 561
+ YV +W E G ++IGGCC +
Sbjct: 297 EDFVSYVKKWHEAGASLIGGCCRTS 321
>gi|290956464|ref|YP_003487646.1| transferase [Streptomyces scabiei 87.22]
gi|260645990|emb|CBG69081.1| putative transferase [Streptomyces scabiei 87.22]
Length = 317
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 121/255 (47%), Gaps = 26/255 (10%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQ 90
LWS+ L P+A E H + AGA++ ++ YQA D K G A +L+ S+
Sbjct: 50 LWSARLLAESPKAITEAHLAYFEAGANVAITASYQATFDGFAKRGIDGDRAAELMALSIG 109
Query: 91 LMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADL 150
L A + + + AAS+GPYG +L DGSEY G Y + A+L
Sbjct: 110 LAADAAAEAGTRGEAR----------PLLVAASVGPYGAMLADGSEYRGRY--GLGVAEL 157
Query: 151 IAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG 210
+HRP +E L A D LALETIP EA AL++ +R AWLS++ D T G
Sbjct: 158 ERFHRPRLEVLAAARPDVLALETIPDTDEAEALLRAVRGLD-VPAWLSYTVAGD-RTRAG 215
Query: 211 ELISSAVTSCLLANPDQIQAIGVNCVRPSHV----STLVRCIKQSHPTVQTIVYPNKGVK 266
+ + A L A+ ++I A+GVNC V T VR + +VYPN G +
Sbjct: 216 QPLEEAF--ALAADAEEIVAVGVNCCASEDVDGAIETAVRVTGK-----PVVVYPNSG-E 267
Query: 267 LLDGSFTSQVSRHTI 281
D + S R T
Sbjct: 268 TWDAAARSWTGRSTF 282
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 126/276 (45%), Gaps = 25/276 (9%)
Query: 289 LWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA 348
LWS+ L P+A E H + A + T DG ++ +D A+L+A
Sbjct: 50 LWSARLLAESPKAITEAHLAYFEAGANVAITASYQATF--DG--FAKRGIDGDRAAELMA 105
Query: 349 WHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA 408
+ A A +P + AAS+GPYG +L DGSEY G Y + A+L
Sbjct: 106 LS-IGLAADAAAEAGTRGEARPLL---VAASVGPYGAMLADGSEYRGRY--GLGVAELER 159
Query: 409 WHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGEL 468
+HRP +E L A D LALETIP EA AL++ +R AWLS++ D T G+
Sbjct: 160 FHRPRLEVLAAARPDVLALETIPDTDEAEALLRAVRGLD-VPAWLSYTVAGD-RTRAGQP 217
Query: 469 ISSAVTSCLLANPDQIQAIGVNCVRPSHV----STLVRCIKQSHPTVQTIVYPNKGGVWD 524
+ A L A+ ++I A+GVNC V T VR + +VYPN G WD
Sbjct: 218 LEEAF--ALAADAEEIVAVGVNCCASEDVDGAIETAVRVTGK-----PVVVYPNSGETWD 270
Query: 525 SVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEV 560
+ W T V W G +IGGCC V
Sbjct: 271 AAARSW--TGRSTFTTEQVLGWRAAGARLIGGCCRV 304
>gi|340360415|ref|ZP_08682885.1| homocysteine S-methyltransferase [Actinomyces sp. oral taxon 448
str. F0400]
gi|339883616|gb|EGQ73459.1| homocysteine S-methyltransferase [Actinomyces sp. oral taxon 448
str. F0400]
Length = 325
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 136/311 (43%), Gaps = 23/311 (7%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASI 320
G +LDG+ +++ + G LWS++ LT PEA H D++ I T +
Sbjct: 23 GPVVLDGAMGTELGARGVDTTSG--LWSALALTEAPEAIAAVHADYLTAGARVICTNSYQ 80
Query: 321 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASI 380
+LR G + A + A R L D ++P + A SI
Sbjct: 81 AVVPALLRAGR------TEDEARAVIAASAR-----LALGARDRYTAVQPREAVLVAGSI 129
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GPYG L DGSEY+G Y M D H P +E L G+ A+ET P EA L
Sbjct: 130 GPYGAWLADGSEYTGAY--GMRAPDFARVHLPRLEVLAAEGLRLFAIETQPRLDEARWLT 187
Query: 441 KLLRE-FPGQKAWLSFSCK-DDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
+ + E P + W+SF + D H + G ++ A A + A+G+NCV P V
Sbjct: 188 ERIGERLPDAECWVSFQVRPDGAHLADGTPLARAAAWAQRAR--NVVAVGLNCVAPPVVD 245
Query: 499 TLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
+ ++ + + YPN G V+D V W T + WL+ GV +IGGCC
Sbjct: 246 RALPVLRAAA-DKPLVAYPNSGDVYDPVTRTWRATVGRGRLTASTSAWLDAGVRLIGGCC 304
Query: 559 EVTSYEIQQMR 569
T + ++R
Sbjct: 305 RTTPADTAELR 315
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 122/258 (47%), Gaps = 19/258 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + G LWS++ LT PEA H D++ AGA +I ++ YQA V
Sbjct: 26 VLDGAMGTELGARGVDTTSG--LWSALALTEAPEAIAAVHADYLTAGARVICTNSYQAVV 83
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
L + G +E EA ++ S +L A+D+ + A SIGPYG
Sbjct: 84 PALLRAGRTEDEARAVIAASARLALGARDRYTAVQPRE----------AVLVAGSIGPYG 133
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY+G Y M D H P +E L G+ A+ET P EA L + +
Sbjct: 134 AWLADGSEYTGAY--GMRAPDFARVHLPRLEVLAAEGLRLFAIETQPRLDEARWLTERIG 191
Query: 189 E-FPGQKAWLSFSCK-DDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
E P + W+SF + D H + G ++ A A + A+G+NCV P V +
Sbjct: 192 ERLPDAECWVSFQVRPDGAHLADGTPLARAAAWAQRAR--NVVAVGLNCVAPPVVDRALP 249
Query: 247 CIKQSHPTVQTIVYPNKG 264
++ + + YPN G
Sbjct: 250 VLRAAA-DKPLVAYPNSG 266
>gi|227893522|ref|ZP_04011327.1| homocysteine methyltransferase [Lactobacillus ultunensis DSM 16047]
gi|227864692|gb|EEJ72113.1| homocysteine methyltransferase [Lactobacillus ultunensis DSM 16047]
Length = 328
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 150/320 (46%), Gaps = 23/320 (7%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
NKG+ +LDG+ ++ + + I + LW+++ L + + + H D+ + A +
Sbjct: 9 NKGL-ILDGAMSTALEKQGIDT--NNDLWTAIALEKDLD---KVHMDYFKA----GAQMT 58
Query: 322 PYGTVLRDGSEYSGH-YVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASI 380
T + + H Y + E D+IA VE +A DY K I + AAS+
Sbjct: 59 ITDTYQANVQAFKKHGYTEEQAE-DMIA---KAVEIAKQARDDYEK--KTGIHNFVAASV 112
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
G YG L G E+ G Y +T + +H P ++ L++ D LA+ET P +E +A++
Sbjct: 113 GSYGAYLARGDEFRGDY--KLTSKQYLNFHLPRLKVLLKNKPDCLAIETQPKLEEVVAIL 170
Query: 441 KLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
L+ P ++SF+ D T S G + A+ L +Q+ A+G NC +P +
Sbjct: 171 DWLKANSPQIPVYVSFTLHDTTKISDGTPLKQAMQK--LNEYNQVFAVGANCFKPFLATA 228
Query: 500 LVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
+ +K+ I+YPN GGV+D W+ ++ +W E G IIGGCC
Sbjct: 229 AIDKMKEFTKKA-IIIYPNLGGVYDEFQRNWIPFNAKFDFRKLSQEWYEHGARIIGGCCS 287
Query: 560 VTSYEIQQMRIMIDEFNTKK 579
E+ Q+ +++K
Sbjct: 288 TGIKEVGQIATFYKTISSQK 307
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 130/257 (50%), Gaps = 22/257 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ ++ + + I + LW+++ L + + + H D+ +AGA + + YQANV
Sbjct: 13 ILDGAMSTALEKQGIDT--NNDLWTAIALEKDLD---KVHMDYFKAGAQMTITDTYQANV 67
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
K GY+E++A D++ K+V++ A+D + I H AAS+G YG
Sbjct: 68 QAFKKHGYTEEQAEDMIAKAVEIAKQARDDYEKKTGI-----------HNFVAASVGSYG 116
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L G E+ G Y +T + +H P ++ L++ D LA+ET P +E +A++ L+
Sbjct: 117 AYLARGDEFRGDY--KLTSKQYLNFHLPRLKVLLKNKPDCLAIETQPKLEEVVAILDWLK 174
Query: 189 -EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
P ++SF+ D T S G + A+ L +Q+ A+G NC +P + +
Sbjct: 175 ANSPQIPVYVSFTLHDTTKISDGTPLKQAMQK--LNEYNQVFAVGANCFKPFLATAAIDK 232
Query: 248 IKQSHPTVQTIVYPNKG 264
+K+ I+YPN G
Sbjct: 233 MKEFTKKA-IIIYPNLG 248
>gi|329940276|ref|ZP_08289558.1| homocysteine methyltransferase [Streptomyces griseoaurantiacus
M045]
gi|329301102|gb|EGG44998.1| homocysteine methyltransferase [Streptomyces griseoaurantiacus
M045]
Length = 308
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 127/260 (48%), Gaps = 27/260 (10%)
Query: 9 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG ++Q+ + H + D LWS+ L PEA VE H + AGA++ ++ YQA
Sbjct: 19 VLDGGLSNQLEAAGHDLGDA----LWSARLLAEAPEAVVEAHLAYFEAGANVAITASYQA 74
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G + +LL SV+ A + + + TAAS GP
Sbjct: 75 TFEGFARYGLTRARTAELLAYSVESAREAARRARERGVAR----------PLWTAASAGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L DGSEY G Y S+ E L +HRP +EAL A D LALET+P +EA AL++
Sbjct: 125 YGAMLADGSEYRGRYGLSVDE--LADFHRPRLEALAAARPDVLALETVPDTEEARALLRA 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R G AWLS++ + T G+ + A A +I A+GVNC P V V
Sbjct: 183 VRGL-GVPAWLSYTVA-GSRTRAGQPLEEAFALAAEAE--EIVAVGVNCCAPKDVEPAVA 238
Query: 247 CIKQ--SHPTVQTIVYPNKG 264
Q P V YPN G
Sbjct: 239 LAAQVTGKPVV---AYPNSG 255
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 139/301 (46%), Gaps = 27/301 (8%)
Query: 264 GVKLLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
G +LDG ++Q+ + H + D LWS+ L PEA VE H + E A++
Sbjct: 16 GTLVLDGGLSNQLEAAGHDLGDA----LWSARLLAEAPEAVVEAHLAYF----EAGANVA 67
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
+ ++ + + A+L+A+ +VE+ A + TAAS G
Sbjct: 68 ITASYQATFEGFARYGLTRARTAELLAY---SVESAREAARRARERGV-ARPLWTAASAG 123
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG +L DGSEY G Y S+ E L +HRP +EAL A D LALET+P +EA AL++
Sbjct: 124 PYGAMLADGSEYRGRYGLSVDE--LADFHRPRLEALAAARPDVLALETVPDTEEARALLR 181
Query: 442 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
+R G AWLS++ + T G+ + A A +I A+GVNC P V V
Sbjct: 182 AVRGL-GVPAWLSYTVA-GSRTRAGQPLEEAFALAAEAE--EIVAVGVNCCAPKDVEPAV 237
Query: 502 RCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
Q P V YPN G W + W T V W G +IGGCC
Sbjct: 238 ALAAQVTGKPVV---AYPNSGETWHADTAGW--TGPVTFTPEAVRNWRRAGARLIGGCCR 292
Query: 560 V 560
V
Sbjct: 293 V 293
>gi|359477546|ref|XP_003631993.1| PREDICTED: homocysteine S-methyltransferase 3 [Vitis vinifera]
Length = 310
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 133/282 (47%), Gaps = 39/282 (13%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG +++ RH D PLWS+ L P+ H D++ AGA II ++ YQA +
Sbjct: 24 VIDGGLATELERHGADLND--PLWSATCLIHSPDLIRRVHLDYLEAGASIIITASYQATI 81
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G S +EA LL +SV++ A+D ++ K L I AAS+G YG
Sbjct: 82 QGFEAKGLSREEAEVLLRRSVEIACEARDIYHE----RCAKGTCLEQRPILVAASVGSYG 137
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEYSGHY ++T L +HR V+ L +G D +A ETIP + EA A +LL
Sbjct: 138 AYLADGSEYSGHYGAAVTLETLKDFHRRRVQVLAESGADLIAFETIPNKLEAKAYAELLD 197
Query: 189 E----FPGQKAWLSFSCKDDTHTSHGE-LISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
E P AW SF+ D + G+ LI A +I +C + V+T
Sbjct: 198 EENIKIP---AWFSFTSLDGINVVSGDSLIECA-------------SIADSCKQVVAVTT 241
Query: 244 LVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD 285
P V +YPN G + DG V ++D D
Sbjct: 242 --------KPVV---IYPNSG-ETYDGVRKEWVKSSGVQDGD 271
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 154/339 (45%), Gaps = 55/339 (16%)
Query: 253 PTVQT-IVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIR 311
PT + + G ++DG +++ RH D PLWS+ L P+ H D++
Sbjct: 9 PTFMADFIRQSGGYAVIDGGLATELERHGADLND--PLWSATCLIHSPDLIRRVHLDYL- 65
Query: 312 GHIETAASI---GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA-GVDYLAL 367
E ASI Y ++ G E G S EA+++ R +VE A + +
Sbjct: 66 ---EAGASIIITASYQATIQ-GFEAKGL---SREEAEVLL--RRSVEIACEARDIYHERC 116
Query: 368 IKPSISSQ----TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 423
K + Q AAS+G YG L DGSEYSGHY ++T L +HR V+ L +G D
Sbjct: 117 AKGTCLEQRPILVAASVGSYGAYLADGSEYSGHYGAAVTLETLKDFHRRRVQVLAESGAD 176
Query: 424 YLALETIPAEKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGE-LISSAVTSCLL 478
+A ETIP + EA A +LL E P AW SF+ D + G+ LI A
Sbjct: 177 LIAFETIPNKLEAKAYAELLDEENIKIP---AWFSFTSLDGINVVSGDSLIECA------ 227
Query: 479 ANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE--DE 536
+I +C + V+T P V +YPN G +D V +W+ + +
Sbjct: 228 -------SIADSCKQVVAVTT--------KPVV---IYPNSGETYDGVRKEWVKSSGVQD 269
Query: 537 YSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEF 575
+ YV +W E G ++ GGCC + + I+ + + + +
Sbjct: 270 GDFVSYVSKWREAGASLFGGCCRTSPHTIRAISMTLSSY 308
>gi|398780766|ref|ZP_10545053.1| homocysteine methyltransferase [Streptomyces auratus AGR0001]
gi|396997905|gb|EJJ08845.1| homocysteine methyltransferase [Streptomyces auratus AGR0001]
Length = 306
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 9 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG ++Q+ + H + D LWS+ L EP A V H+ + AGA + ++ YQA
Sbjct: 18 VLDGGLSNQLEAAGHDLSDA----LWSARLLAEEPAAVVRAHQAYYEAGAQVAITASYQA 73
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G + A +LL +SV+L A + + G + AAS GP
Sbjct: 74 TFEGFARRGIGAERAAELLRRSVELAREAAGRARAG----------GVAGPLYVAASAGP 123
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG +L DGSEY G Y ++ A L +HRP +E L A D LALET+P +EA AL++
Sbjct: 124 YGAMLADGSEYRGRY--GLSVAALERFHRPRLEVLAAARPDVLALETVPDAEEARALLRA 181
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+R G A+LS+S T G+ ++ A A+ ++ A+GVNC P VR
Sbjct: 182 VRGL-GVPAYLSYSVAGGC-TRAGQPLAEAFAVAADAD--EVIAVGVNCCAPDDADRAVR 237
Query: 247 CIKQ--SHPTVQTIVYPNKG 264
+ P V VYPN G
Sbjct: 238 LAARITGKPVV---VYPNSG 254
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 147/325 (45%), Gaps = 30/325 (9%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVET 305
+ S P + + G +LDG ++Q+ + H + D LWS+ L EP A V
Sbjct: 2 VSTSPPLTEALA---AGPVVLDGGLSNQLEAAGHDLSDA----LWSARLLAEEPAAVVRA 54
Query: 306 HRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL 365
H+ + + A + T ++ + + A+L+ R +VE L R
Sbjct: 55 HQAYYEAGAQVAITASYQATF----EGFARRGIGAERAAELL---RRSVE-LAREAAGRA 106
Query: 366 ALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL 425
+ AAS GPYG +L DGSEY G Y ++ A L +HRP +E L A D L
Sbjct: 107 RAGGVAGPLYVAASAGPYGAMLADGSEYRGRY--GLSVAALERFHRPRLEVLAAARPDVL 164
Query: 426 ALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ 485
ALET+P +EA AL++ +R G A+LS+S T G+ ++ A A+ ++
Sbjct: 165 ALETVPDAEEARALLRAVRGL-GVPAYLSYSVAGGC-TRAGQPLAEAFAVAADAD--EVI 220
Query: 486 AIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYV 543
A+GVNC P VR + P V VYPN G WD+ W + + V
Sbjct: 221 AVGVNCCAPDDADRAVRLAARITGKPVV---VYPNSGESWDAAARAWCGSPAFDA--DRV 275
Query: 544 PQWLEEGVNIIGGCCEVTSYEIQQM 568
W +G +IGGCC V I +
Sbjct: 276 AGWAADGARLIGGCCRVGPEAIAAV 300
>gi|291448422|ref|ZP_06587812.1| homocysteine methyltransferase [Streptomyces roseosporus NRRL
15998]
gi|291351369|gb|EFE78273.1| homocysteine methyltransferase [Streptomyces roseosporus NRRL
15998]
Length = 323
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 124/257 (48%), Gaps = 21/257 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG ++Q+ D LWS+ L PE H ++RAGA ++ ++ YQA
Sbjct: 17 LLDGGLSNQLEAQGCDLSDA--LWSARLLADAPEQIEAAHLAYLRAGARVLITASYQATF 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQT-PDINLNKTFNLLTGHIETAASIGPY 127
+ + G L +SV+L SA D + P KT+ AAS+GPY
Sbjct: 75 EGFGRYGLDRSGTEALFARSVELARSAADAARRAGPG---RKTW--------VAASVGPY 123
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G +L DGSEY G Y ++ +L +HRP V AL AG D LALET+P EA ALV++
Sbjct: 124 GAMLADGSEYRGRY--GLSVGELERFHRPRVAALAAAGPDVLALETVPDLDEAEALVRVA 181
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
E G WLS+S T G+ + A + A + + A+GVNC P V
Sbjct: 182 EET-GLPYWLSYSVAGG-RTRAGQPLEEAF--AVAAGRESVLAVGVNCCDPDEAQAAVE- 236
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + +VYPN G
Sbjct: 237 LAVAVTGRPAVVYPNSG 253
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 143/316 (45%), Gaps = 25/316 (7%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIE---TAA 318
+ G LLDG ++Q+ D LWS+ L PE H ++R TA+
Sbjct: 12 DAGPVLLDGGLSNQLEAQGCDLSDA--LWSARLLADAPEQIEAAHLAYLRAGARVLITAS 69
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAA 378
+ R G + SG TEA L A +VE L R+ D P + AA
Sbjct: 70 YQATFEGFGRYGLDRSG------TEA-LFA---RSVE-LARSAADAARRAGPGRKTWVAA 118
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG +L DGSEY G Y ++ +L +HRP V AL AG D LALET+P EA A
Sbjct: 119 SVGPYGAMLADGSEYRGRY--GLSVGELERFHRPRVAALAAAGPDVLALETVPDLDEAEA 176
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
LV++ E G WLS+S T G+ + A + A + + A+GVNC P
Sbjct: 177 LVRVAEET-GLPYWLSYSVAGG-RTRAGQPLEEAF--AVAAGRESVLAVGVNCCDPDEAQ 232
Query: 499 TLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
V + + +VYPN G WD+ W T V W G ++GGCC
Sbjct: 233 AAVE-LAVAVTGRPAVVYPNSGEGWDAGARGW--TGRSTFDPDRVRAWTRAGARLVGGCC 289
Query: 559 EVTSYEIQQMRIMIDE 574
V I ++ +++
Sbjct: 290 RVGPDLIAELAGQLEK 305
>gi|239991425|ref|ZP_04712089.1| homocysteine methyltransferase [Streptomyces roseosporus NRRL
11379]
Length = 325
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 124/257 (48%), Gaps = 21/257 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG ++Q+ D LWS+ L PE H ++RAGA ++ ++ YQA
Sbjct: 19 LLDGGLSNQLEAQGCDLSDA--LWSARLLADAPEQIEAAHLAYLRAGARVLITASYQATF 76
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQT-PDINLNKTFNLLTGHIETAASIGPY 127
+ + G L +SV+L SA D + P KT+ AAS+GPY
Sbjct: 77 EGFGRYGLDRSGTEALFARSVELARSAADAARRAGPG---RKTW--------VAASVGPY 125
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G +L DGSEY G Y ++ +L +HRP V AL AG D LALET+P EA ALV++
Sbjct: 126 GAMLADGSEYRGRY--GLSVGELERFHRPRVAALAAAGPDVLALETVPDLDEAEALVRVA 183
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
E G WLS+S T G+ + A + A + + A+GVNC P V
Sbjct: 184 EET-GLPYWLSYSVAGG-RTRAGQPLEEAF--AVAAGRESVLAVGVNCCDPDEAQAAVE- 238
Query: 248 IKQSHPTVQTIVYPNKG 264
+ + +VYPN G
Sbjct: 239 LAVAVTGRPAVVYPNSG 255
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 143/316 (45%), Gaps = 25/316 (7%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIE---TAA 318
+ G LLDG ++Q+ D LWS+ L PE H ++R TA+
Sbjct: 14 DAGPVLLDGGLSNQLEAQGCDLSDA--LWSARLLADAPEQIEAAHLAYLRAGARVLITAS 71
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAA 378
+ R G + SG TEA L A +VE L R+ D P + AA
Sbjct: 72 YQATFEGFGRYGLDRSG------TEA-LFA---RSVE-LARSAADAARRAGPGRKTWVAA 120
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG +L DGSEY G Y ++ +L +HRP V AL AG D LALET+P EA A
Sbjct: 121 SVGPYGAMLADGSEYRGRY--GLSVGELERFHRPRVAALAAAGPDVLALETVPDLDEAEA 178
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
LV++ E G WLS+S T G+ + A + A + + A+GVNC P
Sbjct: 179 LVRVAEET-GLPYWLSYSVAGG-RTRAGQPLEEAF--AVAAGRESVLAVGVNCCDPDEAQ 234
Query: 499 TLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCC 558
V + + +VYPN G WD+ W T V W G ++GGCC
Sbjct: 235 AAVE-LAVAVTGRPAVVYPNSGEGWDAGARGW--TGRSTFDPDRVRAWTRAGARLVGGCC 291
Query: 559 EVTSYEIQQMRIMIDE 574
V I ++ +++
Sbjct: 292 RVGPDLIAELAGQLEK 307
>gi|313123041|ref|YP_004033300.1| homocysteine/selenocysteine methylase
(s-methylmethionine-dependent) [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312279604|gb|ADQ60323.1| Homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 310
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 121/238 (50%), Gaps = 20/238 (8%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQ 90
LW++ L P+ H+++ +AGA + + YQA++ K G SE A L+ +S
Sbjct: 34 LWTAKALADNPDLVYRVHQEYFKAGARVTITDSYQASLSAFMKHGLSEDAARGLIRESAA 93
Query: 91 LMNSAKDKENQTPDINLNKTFNLLTG-HIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD 149
+ A+D F TG H A S+GPYG L DGSEY G Y +++ +
Sbjct: 94 VAIKARDD------------FEKATGTHNFVAGSVGPYGAYLADGSEYRGDY--ALSHEE 139
Query: 150 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTS 208
+ +H P +E LV GVD LA+ET P E A++ L+ ++P ++SFS KD S
Sbjct: 140 YVDFHAPRIEELVAGGVDCLAVETQPKLSEVRAILDYLKAKYPDLPVYVSFSLKDPATIS 199
Query: 209 HGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGVK 266
G ++ AV ++ Q+ A G NC + + +V+ ++ S + +VYPN G +
Sbjct: 200 EGLPLTEAVEE--VSAYAQVFAAGANCFKLAWTVDVVKNLRASK--LPIVVYPNSGAE 253
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 102/202 (50%), Gaps = 7/202 (3%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S+GPYG L DGSEY G Y +++ + + +H P +E LV GVD LA+ET P E
Sbjct: 113 AGSVGPYGAYLADGSEYRGDY--ALSHEEYVDFHAPRIEELVAGGVDCLAVETQPKLSEV 170
Query: 437 LALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
A++ L+ ++P ++SFS KD S G ++ AV ++ Q+ A G NC + +
Sbjct: 171 RAILDYLKAKYPDLPVYVSFSLKDPATISEGLPLTEAVEE--VSAYAQVFAAGANCFKLA 228
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
+V+ ++ S + +VYPN G +D KW+ + WL G ++G
Sbjct: 229 WTVDVVKNLRASK--LPIVVYPNSGAEYDPSVKKWVYPPEAADFGQAGADWLAAGAKLVG 286
Query: 556 GCCEVTSYEIQQMRIMIDEFNT 577
GCC +I + + + T
Sbjct: 287 GCCTTMPEDIAGLAAAVKKVYT 308
>gi|385817572|ref|YP_005853962.1| homocysteine methyltransferase [Lactobacillus amylovorus GRL1118]
gi|327183510|gb|AEA31957.1| homocysteine methyltransferase [Lactobacillus amylovorus GRL1118]
Length = 331
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 149/320 (46%), Gaps = 18/320 (5%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
+KG+ +LDG+ ++ + + I LW++V L + + + H ++ + + A +
Sbjct: 9 SKGL-VLDGAMSTALEKQGIDT--NTDLWTAVALDKDLDKVYKVHMNYFQAGAQMAITDT 65
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
V E G+ D E +IA V+ +A D+ K I + AAS+G
Sbjct: 66 YQANV--QAFEKHGYSEDKAKE--MIA---DAVKIAKKARDDFEK--KTGIHNYVAASVG 116
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
YG L +G E+ G Y +T+ + +H P ++ L++ D LA+ET P E + L+
Sbjct: 117 SYGAYLAEGDEFRGDY--DLTKKQYLDFHLPRLQVLLQNKPDCLAIETQPKLDEVVVLLD 174
Query: 442 LLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 500
L+E P ++SF+ D T S G + + + DQ+ A+G NC +P +T
Sbjct: 175 WLKENAPEMPVYVSFTLHDTTKISDGTPLKKVMEK--INEYDQVFAVGANCFKPFLATTA 232
Query: 501 VRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEV 560
+ +++ IVYPN GG+++ W+ ++ +W E G IIGGCC
Sbjct: 233 IDKMRE-FTKKNIIVYPNLGGIYNEFERNWIPFNAKFDFGKLSKEWYEHGACIIGGCCST 291
Query: 561 TSYEIQQMRIMIDEFNTKKN 580
EI Q+ N +K+
Sbjct: 292 GVKEISQIAAFYKILNNQKS 311
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 129/258 (50%), Gaps = 21/258 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ ++ + + I LW++V L + + + H ++ +AGA + + YQANV
Sbjct: 13 VLDGAMSTALEKQGIDT--NTDLWTAVALDKDLDKVYKVHMNYFQAGAQMAITDTYQANV 70
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG-HIETAASIGPY 127
K GYSE +A +++ +V++ A+D F TG H AAS+G Y
Sbjct: 71 QAFEKHGYSEDKAKEMIADAVKIAKKARD------------DFEKKTGIHNYVAASVGSY 118
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L +G E+ G Y +T+ + +H P ++ L++ D LA+ET P E + L+ L
Sbjct: 119 GAYLAEGDEFRGDY--DLTKKQYLDFHLPRLQVLLQNKPDCLAIETQPKLDEVVVLLDWL 176
Query: 188 RE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+E P ++SF+ D T S G + + + DQ+ A+G NC +P +T +
Sbjct: 177 KENAPEMPVYVSFTLHDTTKISDGTPLKKVMEK--INEYDQVFAVGANCFKPFLATTAID 234
Query: 247 CIKQSHPTVQTIVYPNKG 264
+++ IVYPN G
Sbjct: 235 KMRE-FTKKNIIVYPNLG 251
>gi|385815065|ref|YP_005851456.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|325125102|gb|ADY84432.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 305
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 121/238 (50%), Gaps = 20/238 (8%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQ 90
LW++ L P+ H+++ +AGA + + YQA++ K G SE A L+ +S
Sbjct: 34 LWTAKALADNPDLVYRVHQEYFKAGARVTITDSYQASLPAFMKHGLSEDAARALIRESAA 93
Query: 91 LMNSAKDKENQTPDINLNKTFNLLTG-HIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD 149
+ A+D F TG H A S+GPYG L DGSEY G Y +++ +
Sbjct: 94 VAIKARDD------------FEKATGIHNFVAGSVGPYGAYLADGSEYRGDY--ALSHEE 139
Query: 150 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTS 208
+ +H P +E LV GVD LA+ET P E A++ L+ ++P ++SFS KD S
Sbjct: 140 YVDFHAPRIEELVAGGVDCLAVETQPKLSEVRAILDYLKAKYPDLPVYVSFSLKDPATIS 199
Query: 209 HGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGVK 266
G ++ AV ++ Q+ A G NC + + +V+ ++ S + +VYPN G +
Sbjct: 200 EGLPLTEAVEE--VSAYAQVFAAGANCFKLAWTVDVVKNLRASK--LPIVVYPNSGAE 253
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 88/161 (54%), Gaps = 7/161 (4%)
Query: 372 ISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
I + A S+GPYG L DGSEY G Y +++ + + +H P +E LV GVD LA+ET P
Sbjct: 108 IHNFVAGSVGPYGAYLADGSEYRGDY--ALSHEEYVDFHAPRIEELVAGGVDCLAVETQP 165
Query: 432 AEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490
E A++ L+ ++P ++SFS KD S G ++ AV ++ Q+ A G N
Sbjct: 166 KLSEVRAILDYLKAKYPDLPVYVSFSLKDPATISEGLPLTEAVEE--VSAYAQVFAAGAN 223
Query: 491 CVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWL 531
C + + +V+ ++ S + +VYPN G +D KW+
Sbjct: 224 CFKLAWTVDVVKNLRASK--LPIVVYPNSGAEYDPSVKKWV 262
>gi|116513465|ref|YP_812371.1| homocysteine methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|418029312|ref|ZP_12667856.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1632]
gi|116092780|gb|ABJ57933.1| homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|354690160|gb|EHE90113.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1632]
Length = 310
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 121/238 (50%), Gaps = 20/238 (8%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQ 90
LW++ L P+ H+++ +AGA + + YQA++ K G SE A L+ +S
Sbjct: 34 LWTAKALADNPDLVYRVHQEYFKAGARVTITDSYQASLPAFMKHGLSEDAARALIRESAA 93
Query: 91 LMNSAKDKENQTPDINLNKTFNLLTG-HIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD 149
+ A+D F TG H A S+GPYG L DGSEY G Y +++ +
Sbjct: 94 VAIKARDD------------FEKATGIHNFVAGSVGPYGAYLADGSEYRGDY--ALSHEE 139
Query: 150 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTS 208
+ +H P +E LV GVD LA+ET P E A++ L+ ++P ++SFS KD S
Sbjct: 140 YVDFHAPRIEELVAGGVDCLAVETQPKLSEVRAILDYLKAKYPDLPVYVSFSLKDPATIS 199
Query: 209 HGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGVK 266
G ++ AV ++ Q+ A G NC + + +V+ ++ S + +VYPN G +
Sbjct: 200 EGLPLTEAVEE--VSAYAQVFAAGANCFKLAWTVDVVKNLRASK--LPIVVYPNSGAE 253
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 7/207 (3%)
Query: 372 ISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
I + A S+GPYG L DGSEY G Y +++ + + +H P +E LV GVD LA+ET P
Sbjct: 108 IHNFVAGSVGPYGAYLADGSEYRGDY--ALSHEEYVDFHAPRIEELVAGGVDCLAVETQP 165
Query: 432 AEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490
E A++ L+ ++P ++SFS KD S G ++ AV ++ Q+ A G N
Sbjct: 166 KLSEVRAILDYLKAKYPDLPVYVSFSLKDPATISEGLPLTEAVEE--VSAYAQVFAAGAN 223
Query: 491 CVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEG 550
C + + +V+ ++ S + +VYPN G +D KW+ + WL G
Sbjct: 224 CFKLAWTVDVVKNLRASK--LPIVVYPNSGAEYDPSVKKWVYPPEAADFGQAGAAWLAAG 281
Query: 551 VNIIGGCCEVTSYEIQQMRIMIDEFNT 577
++GGCC +I + + + T
Sbjct: 282 AKLVGGCCTTMPEDIAGLAAAVKKVYT 308
>gi|56207592|emb|CAI21299.1| novel protein containing a homocysteine S-methyltransferase domain
[Danio rerio]
Length = 140
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 82/130 (63%), Gaps = 9/130 (6%)
Query: 74 LGYSEQEALDLLHKSVQLMN-SAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLR 132
LG +EA ++ +VQL + + +Q+P + + A S+GPYG+ L
Sbjct: 7 LGVQPEEAQHMMMSAVQLAKETVSEFISQSPMSDRREPL--------VAGSVGPYGSFLH 58
Query: 133 DGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPG 192
DGSEY+G Y D MT +L WHRP ++ LV+AG D +A+ETIP KEA ALVK+L+EFP
Sbjct: 59 DGSEYTGAYEDKMTVEELKDWHRPQIQCLVKAGADLVAMETIPGLKEAEALVKVLKEFPE 118
Query: 193 QKAWLSFSCK 202
KAWLSFSCK
Sbjct: 119 TKAWLSFSCK 128
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 63/82 (76%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S+GPYG+ L DGSEY+G Y D MT +L WHRP ++ LV+AG D +A+ETIP KEA
Sbjct: 47 AGSVGPYGSFLHDGSEYTGAYEDKMTVEELKDWHRPQIQCLVKAGADLVAMETIPGLKEA 106
Query: 437 LALVKLLREFPGQKAWLSFSCK 458
ALVK+L+EFP KAWLSFSCK
Sbjct: 107 EALVKVLKEFPETKAWLSFSCK 128
>gi|326333481|ref|ZP_08199723.1| homocysteine S-methyltransferase [Nocardioidaceae bacterium
Broad-1]
gi|325948726|gb|EGD40824.1| homocysteine S-methyltransferase [Nocardioidaceae bacterium
Broad-1]
Length = 287
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 130/268 (48%), Gaps = 26/268 (9%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG ++ + DV G LW++ L P HR + AGAD+ ++ YQA
Sbjct: 2 VTILDGGLSNALEARG-HDVSGA-LWTARLLDESPAEIAAVHRAYYAAGADVATTASYQA 59
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+V + G +E A +LL +SV++ A++ + P G + AAS+GP
Sbjct: 60 SVPGFVEAGMTETYATELLRRSVRI---AREVAAEGP------------GRL-VAASVGP 103
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y ++ A L +H P + L D +A+ETIP +EA LV L
Sbjct: 104 YGAYLADGSEYRGRY--GVSAATLRDFHAPRLALLETEDPDLIAVETIPDIEEAEVLVDL 161
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L + G W S+SC T T G+ A L A + A+GVNC P+ V V+
Sbjct: 162 LDDI-GLPVWFSYSCA-GTRTRAGQ--PLADALALAAGIRSVVAVGVNCCDPADVPAAVQ 217
Query: 247 CIKQSHPTVQTIVYPNKGVKLLDGSFTS 274
+ +VYPN G DG++T
Sbjct: 218 LATATGE--PAVVYPNTGETYADGAWTG 243
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 127/305 (41%), Gaps = 36/305 (11%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V +LDG ++ + DV G LW++ L P HR + + A +
Sbjct: 2 VTILDGGLSNALEARG-HDVSGA-LWTARLLDESPAEIAAVHRAYYAAGADVATTASYQA 59
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
+V G MTE R +V + R +A P AAS+GPYG
Sbjct: 60 SV-------PGFVEAGMTETYATELLRRSVR-IARE----VAAEGPG--RLVAASVGPYG 105
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
L DGSEY G Y ++ A L +H P + L D +A+ETIP +EA LV LL
Sbjct: 106 AYLADGSEYRGRY--GVSAATLRDFHAPRLALLETEDPDLIAVETIPDIEEAEVLVDLLD 163
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 504
+ G W S+SC T T G+ A L A + A+GVNC P+ V V+
Sbjct: 164 DI-GLPVWFSYSCA-GTRTRAGQ--PLADALALAAGIRSVVAVGVNCCDPADVPAAVQLA 219
Query: 505 KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVP----QWLEEGVNIIGGCCEV 560
+ +VYPN G + W T H+ P W+ G +GGCC V
Sbjct: 220 TATGE--PAVVYPNTGETY--ADGAWTGTP------HFRPGEALSWVSSGAAYVGGCCRV 269
Query: 561 TSYEI 565
EI
Sbjct: 270 GPAEI 274
>gi|422845023|ref|ZP_16891733.1| homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
gi|325684805|gb|EGD26957.1| homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 319
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 121/238 (50%), Gaps = 20/238 (8%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQ 90
LW++ L P+ H+++ +AGA + + YQA++ K G SE A L+ +S
Sbjct: 43 LWTAKALADNPDLVYRVHQEYFKAGARVTITDSYQASLSAFMKHGLSEDAARGLIRESAA 102
Query: 91 LMNSAKDKENQTPDINLNKTFNLLTG-HIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD 149
+ A+D F TG H A S+GPYG L DGSEY G Y +++ +
Sbjct: 103 VAIKARDD------------FEKATGIHNFVAGSVGPYGAYLADGSEYRGDY--ALSHEE 148
Query: 150 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTS 208
+ +H P +E LV GVD LA+ET P E A++ L+ ++P ++SFS KD S
Sbjct: 149 YVDFHAPRIEELVAGGVDCLAVETQPKLSEVRAILDHLKAKYPDLPVYVSFSLKDPATIS 208
Query: 209 HGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGVK 266
G ++ AV ++ Q+ A G NC + + +V+ ++ S + +VYPN G +
Sbjct: 209 EGLPLTEAVEE--VSAYAQVFAAGANCFKLAWTVDVVKNLRASK--LPIVVYPNSGAE 262
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 144/317 (45%), Gaps = 18/317 (5%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
+G LDGS ++ + +D + LW++ L P+ H+++ + +
Sbjct: 18 TQGPVTLDGSMSTPLEAWG-EDTNSD-LWTAKALADNPDLVYRVHQEYFKAGARVTITDS 75
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
++ S + H + LI R + ++A D+ I + A S+G
Sbjct: 76 YQASL----SAFMKHGLSEDAARGLI---RESAAVAIKARDDFEKAT--GIHNFVAGSVG 126
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
PYG L DGSEY G Y +++ + + +H P +E LV GVD LA+ET P E A++
Sbjct: 127 PYGAYLADGSEYRGDY--ALSHEEYVDFHAPRIEELVAGGVDCLAVETQPKLSEVRAILD 184
Query: 442 LLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 500
L+ ++P ++SFS KD S G ++ AV ++ Q+ A G NC + + +
Sbjct: 185 HLKAKYPDLPVYVSFSLKDPATISEGLPLTEAVEE--VSAYAQVFAAGANCFKLAWTVDV 242
Query: 501 VRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEV 560
V+ ++ S + +VYPN G +D KW+ + WL G ++GGCC
Sbjct: 243 VKNLRASK--LPIVVYPNSGAEYDPSVKKWVYPPEAADFGQAGADWLAAGAKLVGGCCTT 300
Query: 561 TSYEIQQMRIMIDEFNT 577
+I + + + T
Sbjct: 301 MPEDIAGLAAAVKKVYT 317
>gi|104773472|ref|YP_618452.1| homocysteine methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103422553|emb|CAI97150.1| homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
Length = 310
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 121/238 (50%), Gaps = 20/238 (8%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQ 90
LW++ L P+ H+++ +AGA + + YQA++ K G SE A L+ +S
Sbjct: 34 LWTAKALADNPDLVYRVHQEYFKAGARVTITDSYQASLPAFMKHGLSEDAARALIRESAA 93
Query: 91 LMNSAKDKENQTPDINLNKTFNLLTG-HIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD 149
+ A+D F TG H A S+GPYG L DGSEY G Y +++ +
Sbjct: 94 VAIKARDD------------FEKETGIHNFVAGSVGPYGAYLADGSEYRGDY--ALSHEE 139
Query: 150 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTS 208
+ +H P +E LV GVD LA+ET P E A++ L+ ++P ++SFS KD S
Sbjct: 140 YVDFHAPRIEELVAGGVDCLAVETQPKLSEVRAILDYLKAKYPDLPVYVSFSLKDPATIS 199
Query: 209 HGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGVK 266
G ++ AV ++ Q+ A G NC + + +V+ ++ S + +VYPN G +
Sbjct: 200 EGLPLTEAVEE--VSAYAQVFAAGANCFKLAWTVDVVKNLRASK--LPIVVYPNSGAE 253
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 7/207 (3%)
Query: 372 ISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
I + A S+GPYG L DGSEY G Y +++ + + +H P +E LV GVD LA+ET P
Sbjct: 108 IHNFVAGSVGPYGAYLADGSEYRGDY--ALSHEEYVDFHAPRIEELVAGGVDCLAVETQP 165
Query: 432 AEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490
E A++ L+ ++P ++SFS KD S G ++ AV ++ Q+ A G N
Sbjct: 166 KLSEVRAILDYLKAKYPDLPVYVSFSLKDPATISEGLPLTEAVEE--VSAYAQVFAAGAN 223
Query: 491 CVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEG 550
C + + +V+ ++ S + +VYPN G +D KW+ + WL G
Sbjct: 224 CFKLAWTVDVVKNLRASK--LPIVVYPNSGAEYDPSVKKWVYPPEAADFGQAGAAWLAAG 281
Query: 551 VNIIGGCCEVTSYEIQQMRIMIDEFNT 577
++GGCC +I + + + T
Sbjct: 282 AKLVGGCCTTMPEDIAGLAAAVKKVYT 308
>gi|418034956|ref|ZP_12673422.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1519]
gi|354691622|gb|EHE91541.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1519]
Length = 310
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 121/238 (50%), Gaps = 20/238 (8%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQ 90
LW++ L P+ H+++ +AGA + + YQA++ K G SE A L+ +S
Sbjct: 34 LWTAKALADNPDLVYRVHQEYFKAGARVTITDSYQASLPAFMKHGLSEDAARALIRESAA 93
Query: 91 LMNSAKDKENQTPDINLNKTFNLLTG-HIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD 149
+ A+D F TG H A S+GPYG L DGSEY G Y +++ +
Sbjct: 94 VAIKARDD------------FEKETGIHNFAAGSVGPYGAYLADGSEYRGDY--ALSHEE 139
Query: 150 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTS 208
+ +H P +E LV GVD LA+ET P E A++ L+ ++P ++SFS KD S
Sbjct: 140 YVDFHAPRIEELVAGGVDCLAVETQPKLSEVRAILDYLKAKYPDLPVYVSFSLKDPATIS 199
Query: 209 HGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGVK 266
G ++ AV ++ Q+ A G NC + + +V+ ++ S + +VYPN G +
Sbjct: 200 EGLPLTEAVEE--VSAYAQVFAAGANCFKLAWTVDVVKNLRASK--LPIVVYPNSGAE 253
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 7/207 (3%)
Query: 372 ISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
I + A S+GPYG L DGSEY G Y +++ + + +H P +E LV GVD LA+ET P
Sbjct: 108 IHNFAAGSVGPYGAYLADGSEYRGDY--ALSHEEYVDFHAPRIEELVAGGVDCLAVETQP 165
Query: 432 AEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490
E A++ L+ ++P ++SFS KD S G ++ AV ++ Q+ A G N
Sbjct: 166 KLSEVRAILDYLKAKYPDLPVYVSFSLKDPATISEGLPLTEAVEE--VSAYAQVFAAGAN 223
Query: 491 CVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEG 550
C + + +V+ ++ S + +VYPN G +D KW+ + WL G
Sbjct: 224 CFKLAWTVDVVKNLRASK--LPIVVYPNSGAEYDPSVKKWVYPPEAADFGQAGAAWLAAG 281
Query: 551 VNIIGGCCEVTSYEIQQMRIMIDEFNT 577
++GGCC +I + + + T
Sbjct: 282 AKLVGGCCTTMPEDIAGLAAAVKKVYT 308
>gi|403714913|ref|ZP_10940768.1| homocysteine S-methyltransferase [Kineosphaera limosa NBRC 100340]
gi|403211117|dbj|GAB95451.1| homocysteine S-methyltransferase [Kineosphaera limosa NBRC 100340]
Length = 310
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 135/302 (44%), Gaps = 21/302 (6%)
Query: 269 DGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
DG +++ H + D LWS+ L TEPEA H DF A + +
Sbjct: 20 DGGLATRLEARGHDLSDT----LWSARLLLTEPEAVRAAHADFFAAGAAVAITASYQVSE 75
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
L G +G V+ + +A R A A PS+ AAS+GPYG
Sbjct: 76 L--GFAAAGRPVEEVA----VALRRSVTLAREAAQATGAGAGGPSVRF-VAASVGPYGAA 128
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y ++ A L AWHRP ++ L AG D LALETIP+ EA AL+ + +
Sbjct: 129 LADGSEYRGDY--GLSVAQLRAWHRPRLQVLADAGADVLALETIPSLAEAEALLAEVAQL 186
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
G AWLS + D T GE + A + A+G NC P ++ +
Sbjct: 187 -GVPAWLSMTA-DGERTRLGEPLREAYAMAADVA--NVVAVGANCYAPEQTGQVLAAVAA 242
Query: 507 SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQ 566
P + +VYPN G WD+ +W + +W+ G ++GGCC V+ I
Sbjct: 243 GAPELPPVVYPNSGERWDASARRWTGAPTIGAAAAR--EWVAGGARLVGGCCRVSPRLIA 300
Query: 567 QM 568
M
Sbjct: 301 DM 302
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 121/258 (46%), Gaps = 21/258 (8%)
Query: 11 DGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
DG +++ H + D LWS+ L TEPEA H DF AGA + ++ YQ +
Sbjct: 20 DGGLATRLEARGHDLSDT----LWSARLLLTEPEAVRAAHADFFAAGAAVAITASYQVSE 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G +E L +SV L A++ T + + AAS+GPYG
Sbjct: 76 LGFAAAGRPVEEVAVALRRSVTL---AREAAQATGAGAGGPSVRFV------AASVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y ++ A L AWHRP ++ L AG D LALETIP+ EA AL+ +
Sbjct: 127 AALADGSEYRGDY--GLSVAQLRAWHRPRLQVLADAGADVLALETIPSLAEAEALLAEVA 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+ G AWLS + D T GE + A + A+G NC P ++ +
Sbjct: 185 QL-GVPAWLSMTA-DGERTRLGEPLREAYAMAADVA--NVVAVGANCYAPEQTGQVLAAV 240
Query: 249 KQSHPTVQTIVYPNKGVK 266
P + +VYPN G +
Sbjct: 241 AAGAPELPPVVYPNSGER 258
>gi|300812709|ref|ZP_07093117.1| putative Homocysteine S-methyltransferase [Lactobacillus
delbrueckii subsp. bulgaricus PB2003/044-T3-4]
gi|300496297|gb|EFK31411.1| putative Homocysteine S-methyltransferase [Lactobacillus
delbrueckii subsp. bulgaricus PB2003/044-T3-4]
Length = 310
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 121/238 (50%), Gaps = 20/238 (8%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQ 90
LW++ L P+ H+++ +AGA + + YQA++ K G SE A L+ +S
Sbjct: 34 LWTAKALADNPDLVYRVHQEYFKAGARVTITDSYQASLPAFMKHGLSEDAARALIRESAA 93
Query: 91 LMNSAKDKENQTPDINLNKTFNLLTG-HIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD 149
+ A+D F TG H A S+GPYG L DGSEY G Y +++ +
Sbjct: 94 VAIKARDD------------FEKATGIHNFVAGSVGPYGAYLADGSEYRGDY--ALSHEE 139
Query: 150 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTS 208
+ +H P ++ LV GVD LA+ET P E A++ L+ ++P ++SFS KD S
Sbjct: 140 YVDFHAPRIKELVAGGVDCLAVETQPKLSEVRAILDYLKAKYPDLPVYVSFSLKDPASIS 199
Query: 209 HGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGVK 266
G ++ AV ++ Q+ A G NC + + +V+ ++ S + +VYPN G +
Sbjct: 200 EGLPLTEAVEE--VSAYAQVFAAGANCFKLAWTVDVVKNLRASK--LPIVVYPNSGAE 253
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 102/202 (50%), Gaps = 7/202 (3%)
Query: 372 ISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
I + A S+GPYG L DGSEY G Y +++ + + +H P ++ LV GVD LA+ET P
Sbjct: 108 IHNFVAGSVGPYGAYLADGSEYRGDY--ALSHEEYVDFHAPRIKELVAGGVDCLAVETQP 165
Query: 432 AEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490
E A++ L+ ++P ++SFS KD S G ++ AV ++ Q+ A G N
Sbjct: 166 KLSEVRAILDYLKAKYPDLPVYVSFSLKDPASISEGLPLTEAVEE--VSAYAQVFAAGAN 223
Query: 491 CVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEG 550
C + + +V+ ++ S + +VYPN G +D KW+ + WL G
Sbjct: 224 CFKLAWTVDVVKNLRASK--LPIVVYPNSGAEYDPSVKKWVYPPEAADFGQAGAAWLAAG 281
Query: 551 VNIIGGCCEVTSYEIQQMRIMI 572
++GGCC +I + +
Sbjct: 282 AKLVGGCCTTMPEDIAGLAAAV 303
>gi|318058173|ref|ZP_07976896.1| homocysteine methyltransferase [Streptomyces sp. SA3_actG]
gi|318078928|ref|ZP_07986260.1| homocysteine methyltransferase [Streptomyces sp. SA3_actF]
Length = 304
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 141/306 (46%), Gaps = 37/306 (12%)
Query: 267 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+LDG ++++ + H + D LWS+ L EP A HR + E A +
Sbjct: 24 VLDGGLSNELEAAGHGLADA----LWSARLLRDEPAALTGAHRAYA----EAGAEVATTA 75
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
+ ++ H +D+ +L+A +V A AG S AAS+GPYG
Sbjct: 76 SYQASFEGFARHGIDAARTRELLAL---SVTAARAAG-----------SRWVAASVGPYG 121
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
+L DGSEY G Y + A L +H P V+AL+ AG D LALET+P +EA AL+ ++R
Sbjct: 122 AMLADGSEYRGRY--GVGRAALERFHGPRVDALLAAGPDVLALETVPDAEEARALLAVVR 179
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP--SHVSTLVR 502
G WLS+S D T G+ + +A L A +++ A+GVNC P +
Sbjct: 180 GC-GVPVWLSYSVADG-RTRAGQPLDAAFG--LAAEAEEVVAVGVNCCEPLEVADAVRRA 235
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTS 562
P V YPN G WD+ W D + QW G ++GGCC V
Sbjct: 236 VAASGKPGV---AYPNSGERWDAHARGW--RSDPSFVPELAAQWYAAGARLVGGCCRVGP 290
Query: 563 YEIQQM 568
I+ +
Sbjct: 291 DGIRGV 296
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 126/265 (47%), Gaps = 37/265 (13%)
Query: 6 KVKLLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+ +LDG ++++ + H + D LWS+ L EP A HR + AGA++ ++
Sbjct: 21 RAVVLDGGLSNELEAAGHGLADA----LWSARLLRDEPAALTGAHRAYAEAGAEVATTAS 76
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
YQA+ + + G +LL SV +A G AAS
Sbjct: 77 YQASFEGFARHGIDAARTRELLALSVTAARAA--------------------GSRWVAAS 116
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG +L DGSEY G Y + A L +H P V+AL+ AG D LALET+P +EA AL
Sbjct: 117 VGPYGAMLADGSEYRGRY--GVGRAALERFHGPRVDALLAAGPDVLALETVPDAEEARAL 174
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP--SHV 241
+ ++R G WLS+S D T G+ + +A L A +++ A+GVNC P
Sbjct: 175 LAVVRGC-GVPVWLSYSVADG-RTRAGQPLDAAFG--LAAEAEEVVAVGVNCCEPLEVAD 230
Query: 242 STLVRCIKQSHPTVQTIVYPNKGVK 266
+ P V YPN G +
Sbjct: 231 AVRRAVAASGKPGV---AYPNSGER 252
>gi|325956688|ref|YP_004292100.1| homocysteine methyltransferase [Lactobacillus acidophilus 30SC]
gi|325333253|gb|ADZ07161.1| homocysteine methyltransferase [Lactobacillus acidophilus 30SC]
Length = 331
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 129/258 (50%), Gaps = 21/258 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ ++ + + I LW++V L + + + H ++ +AGA + + YQANV
Sbjct: 13 VLDGAMSTALEKQGIDT--NTDLWTAVALDKDLDKVYKVHMNYFQAGAQMAITDTYQANV 70
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG-HIETAASIGPY 127
K GYSE +A +++ +V++ A+D F TG H AAS+G Y
Sbjct: 71 QAFEKHGYSEDKAKEMIADAVKIAKKARD------------DFEKKTGIHNYVAASVGSY 118
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L +G E+ G Y +T+ + +H P ++ L++ D LA+ET P E + L+ L
Sbjct: 119 GAYLAEGDEFRGDY--DLTKKQYLDFHLPRLQVLLQNKPDCLAIETQPKLDEVVVLLDWL 176
Query: 188 RE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+E P ++SF+ D T S G + + + DQ+ A+G NC +P +T +
Sbjct: 177 KENAPEMPVYVSFTLHDTTKISDGTPLKKVMEK--INEYDQVFAVGANCFKPFLATTAID 234
Query: 247 CIKQSHPTVQTIVYPNKG 264
+++ IVYPN G
Sbjct: 235 KMRE-FTKKNIIVYPNLG 251
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 148/320 (46%), Gaps = 18/320 (5%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
+KG+ +LDG+ ++ + + I LW++V L + + + H ++ + + A +
Sbjct: 9 SKGL-VLDGAMSTALEKQGIDT--NTDLWTAVALDKDLDKVYKVHMNYFQAGAQMAITDT 65
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
V E G+ D E +IA V+ +A D+ K I + AAS+G
Sbjct: 66 YQANV--QAFEKHGYSEDKAKE--MIA---DAVKIAKKARDDFEK--KTGIHNYVAASVG 116
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
YG L +G E+ G Y +T+ + +H P ++ L++ D LA+ET P E + L+
Sbjct: 117 SYGAYLAEGDEFRGDY--DLTKKQYLDFHLPRLQVLLQNKPDCLAIETQPKLDEVVVLLD 174
Query: 442 LLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 500
L+E P ++SF+ D T S G + + + DQ+ A+G NC +P +T
Sbjct: 175 WLKENAPEMPVYVSFTLHDTTKISDGTPLKKVMEK--INEYDQVFAVGANCFKPFLATTA 232
Query: 501 VRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEV 560
+ +++ IVYPN GG+++ W+ ++ + E G IIGGCC
Sbjct: 233 IDKMRE-FTKKNIIVYPNLGGIYNEFERNWIPFNAKFDFGKLSKECYEHGACIIGGCCST 291
Query: 561 TSYEIQQMRIMIDEFNTKKN 580
EI Q+ N +K+
Sbjct: 292 GVKEISQIAAFYKILNNQKS 311
>gi|241641504|ref|XP_002410979.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
[Ixodes scapularis]
gi|215503657|gb|EEC13151.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
[Ixodes scapularis]
Length = 185
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 105/183 (57%), Gaps = 11/183 (6%)
Query: 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA 432
+S A S+G YG DGSEY+G Y D+M+ +L WHR V+ LVR G D LA ETIPA
Sbjct: 4 TSAFAGSVGSYGAYPYDGSEYTGSYADTMSVKELCDWHRFRVQHLVRLGCDLLAFETIPA 63
Query: 433 EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIGVNC 491
+EALAL++LLRE PG K WLSF C+D+ T+ GE + A+ + L + QI AI VNC
Sbjct: 64 LQEALALLQLLREHPGTKGWLSFGCQDEKLTAKGECLQKAIQAVLGKDSGSQICAIRVNC 123
Query: 492 VRPSHVSTLVR-CIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQWLEE 549
RP V L++ K+ P + + Y D+ W L +D + +YV +W
Sbjct: 124 CRPDMVGLLLKDARKEGQPPL--VAYA------DAEVASWTLVPKDSDQLGNYVAEWYRA 175
Query: 550 GVN 552
GV
Sbjct: 176 GVR 178
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 83/127 (65%), Gaps = 1/127 (0%)
Query: 121 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 180
A S+G YG DGSEY+G Y D+M+ +L WHR V+ LVR G D LA ETIPA +EA
Sbjct: 8 AGSVGSYGAYPYDGSEYTGSYADTMSVKELCDWHRFRVQHLVRLGCDLLAFETIPALQEA 67
Query: 181 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIGVNCVRPS 239
LAL++LLRE PG K WLSF C+D+ T+ GE + A+ + L + QI AI VNC RP
Sbjct: 68 LALLQLLREHPGTKGWLSFGCQDEKLTAKGECLQKAIQAVLGKDSGSQICAIRVNCCRPD 127
Query: 240 HVSTLVR 246
V L++
Sbjct: 128 MVGLLLK 134
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%)
Query: 317 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
A S+G YG DGSEY+G Y D+M+ +L WHR V+ LVR G D LA
Sbjct: 8 AGSVGSYGAYPYDGSEYTGSYADTMSVKELCDWHRFRVQHLVRLGCDLLAF 58
>gi|389818800|ref|ZP_10208975.1| homocysteine methyltransferase [Planococcus antarcticus DSM 14505]
gi|388463710|gb|EIM06057.1| homocysteine methyltransferase [Planococcus antarcticus DSM 14505]
Length = 265
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 120/256 (46%), Gaps = 59/256 (23%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG+ +++ + D LWS+ L PE + H D+ +AGAD ++ YQA +
Sbjct: 15 IVDGAMATELENYGCNLND--RLWSAKILMGNPELIKKVHVDYFQAGADCAITASYQATI 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ + G +E+EA+ L+ KSVQ+ + A+D+ D N+ L+ AAS+GPYG
Sbjct: 73 EGYKERGLTEEEAIGLIQKSVQIASEARDEFWTELDNQSNRPKPLV------AASVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G Y S++E +LIA+H+ + LV AG D LA ETIP EA
Sbjct: 127 AFLSDGSEYRGDY--SLSEDELIAFHKERIRVLVDAGADILACETIPCLAEA-------- 176
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+AIG+NC P + +L+ +
Sbjct: 177 ----------------------------------------KAIGINCSAPHIIESLMTEV 196
Query: 249 KQSHPTVQTIVYPNKG 264
K S IVYPN G
Sbjct: 197 K-SQTAKPIIVYPNSG 211
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 128/313 (40%), Gaps = 74/313 (23%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
+PN ++DG+ +++ + D LWS+ L PE + H D+ + + A +
Sbjct: 11 FPNV---IVDGAMATELENYGCNLND--RLWSAKILMGNPELIKKVHVDYFQAGADCAIT 65
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALI-------KPSI 372
T+ G+ +TE + I + +V+ A ++ + KP +
Sbjct: 66 ASYQATI-------EGYKERGLTEEEAIGLIQKSVQIASEARDEFWTELDNQSNRPKPLV 118
Query: 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA 432
AAS+GPYG L DGSEY G Y S++E +LIA+H+ + LV AG D LA ETIP
Sbjct: 119 ----AASVGPYGAFLSDGSEYRGDY--SLSEDELIAFHKERIRVLVDAGADILACETIPC 172
Query: 433 EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 492
EA +AIG+NC
Sbjct: 173 LAEA------------------------------------------------KAIGINCS 184
Query: 493 RPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552
P + +L+ +K S IVYPN G +D W + E +W E G
Sbjct: 185 APHIIESLMTEVK-SQTAKPIIVYPNSGEEYDPTSKTWGEGSSENQFTPSTQRWYEAGAQ 243
Query: 553 IIGGCCEVTSYEI 565
IIGGCC T +I
Sbjct: 244 IIGGCCRTTPEDI 256
>gi|418577024|ref|ZP_13141156.1| homocysteine methyltransferase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379324689|gb|EHY91835.1| homocysteine methyltransferase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 301
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 140/289 (48%), Gaps = 27/289 (9%)
Query: 289 LWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA 348
LWSS L P + H+ F G + S Y Y T +D I
Sbjct: 34 LWSSEVLKNNPTQIKQAHQAFTD-----------VGADILLTSTYQASY---QTFSD-IG 78
Query: 349 WHRPNVEALVRAGVDYLALIKPSISSQT-AASIGPYGTVLRDGSEYSGHYVDSMTEADLI 407
++ L V+ +++ + +Q S+GPYG L DGSEY+G Y +++ D
Sbjct: 79 MKATEIDQLYNTAVN--QIMEATTDTQVIVGSLGPYGAYLSDGSEYTGAY--DLSKEDYF 134
Query: 408 AWHRPNVEALVRAGVDYLALETIPAEKEALALVK-LLREFPGQKAWLSFSCKDDTHTSHG 466
+H+ +EALV+ G++ ET+P +E A+V+ ++ + Q WLS + +D S
Sbjct: 135 QFHKTRIEALVKRGINDFVFETVPNFEEIKAIVEYIVPHYTNQTFWLSVTVNEDGDLSDD 194
Query: 467 ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTV-QTI-VYPNKGGVWD 524
+ + + ++I G+NC S V+ + + I + V QTI +YPN G ++
Sbjct: 195 TEFEK-LCAYIKQYAERIPVFGINC---SSVAGINKAISKGLKNVPQTIALYPNGGAQYN 250
Query: 525 SVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMID 573
+V +W ++ I+ +P WL++GV IIGGCC+ T I+ ++ I+
Sbjct: 251 AVEKEWESVGNQGLIVEQIPDWLDQGVKIIGGCCQTTPENIKSIKEAIE 299
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 117/240 (48%), Gaps = 29/240 (12%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSV- 89
LWSS L P + H+ F GADI+ +S YQA+ + +G E L + +V
Sbjct: 34 LWSSEVLKNNPTQIKQAHQAFTDVGADILLTSTYQASYQTFSDIGMKATEIDQLYNTAVN 93
Query: 90 QLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD 149
Q+M + D + ++ G S+GPYG L DGSEY+G Y +++ D
Sbjct: 94 QIMEATTDTQ-------------VIVG------SLGPYGAYLSDGSEYTGAY--DLSKED 132
Query: 150 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK-LLREFPGQKAWLSFSCKDDTHTS 208
+H+ +EALV+ G++ ET+P +E A+V+ ++ + Q WLS + +D S
Sbjct: 133 YFQFHKTRIEALVKRGINDFVFETVPNFEEIKAIVEYIVPHYTNQTFWLSVTVNEDGDLS 192
Query: 209 HGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTV-QTI-VYPNKGVK 266
+ + + ++I G+NC S V+ + + I + V QTI +YPN G +
Sbjct: 193 DDTEFEK-LCAYIKQYAERIPVFGINC---SSVAGINKAISKGLKNVPQTIALYPNGGAQ 248
>gi|302537497|ref|ZP_07289839.1| predicted protein [Streptomyces sp. C]
gi|302446392|gb|EFL18208.1| predicted protein [Streptomyces sp. C]
Length = 288
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 138/303 (45%), Gaps = 38/303 (12%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
LLDG ++Q++ D+ G +W+ L P H ++R E V
Sbjct: 18 LLDGGLSNQLADQGC-DLSGG-MWTGRVLAERPGEVQAAHTAYVRAGAE----------V 65
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
L S GH D + + +A A + AAS+GPYG +
Sbjct: 66 LITASYQVGHEPDLLERSVRVA---------------GAAARAAAREVWVAASVGPYGAL 110
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DGSEY G Y +TEA+L+A+HRP + AL+ AG D LALET+P EA AL+++L
Sbjct: 111 LADGSEYRGRY--GLTEAELVAFHRPRIGALLAAGPDLLALETVPDVLEARALLRVL-AG 167
Query: 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 506
G +AWL+++ T G+ ++ A A ++ A+GVNC P+ V L
Sbjct: 168 TGARAWLTYTVAGG-RTRAGQPLAEAFALAAAAP--EVIAVGVNCCDPAEV--LPALAAA 222
Query: 507 SHPTVQTIV-YPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
+ T + +V YPN G VWD+ W V W G ++GGCC + I
Sbjct: 223 ASVTAKPLVAYPNDGSVWDAATGSW--NAPAAPAPWPVEAWRAAGARLVGGCCRIGPDRI 280
Query: 566 QQM 568
+
Sbjct: 281 AAL 283
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 132/260 (50%), Gaps = 38/260 (14%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ LLDG ++Q++ D+ G +W+ L P H ++RAGA+++ ++ YQ
Sbjct: 15 RAVLLDGGLSNQLADQGC-DLSGG-MWTGRVLAERPGEVQAAHTAYVRAGAEVLITASYQ 72
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
+ DLL +SV++ +A + + AAS+G
Sbjct: 73 VGHEP------------DLLERSVRVAGAAARAAAREVWV---------------AASVG 105
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
PYG +L DGSEY G Y +TEA+L+A+HRP + AL+ AG D LALET+P EA AL++
Sbjct: 106 PYGALLADGSEYRGRY--GLTEAELVAFHRPRIGALLAAGPDLLALETVPDVLEARALLR 163
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
+L G +AWL+++ T G+ ++ A A ++ A+GVNC P+ V L
Sbjct: 164 VL-AGTGARAWLTYTVAGG-RTRAGQPLAEAFALAAAAP--EVIAVGVNCCDPAEV--LP 217
Query: 246 RCIKQSHPTVQTIV-YPNKG 264
+ T + +V YPN G
Sbjct: 218 ALAAAASVTAKPLVAYPNDG 237
>gi|73663481|ref|YP_302262.1| homocysteine methyltransferase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495996|dbj|BAE19317.1| putative homocysteine S-methyltransferase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 301
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 140/289 (48%), Gaps = 27/289 (9%)
Query: 289 LWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA 348
LWSS L P + H+ F G + S Y Y T +D I
Sbjct: 34 LWSSEVLKNNPTQIKQAHQAFTD-----------VGADILLTSTYQASY---QTFSD-IG 78
Query: 349 WHRPNVEALVRAGVDYLALIKPSISSQT-AASIGPYGTVLRDGSEYSGHYVDSMTEADLI 407
++ L V+ +++ + +Q S+GPYG L DGSEY+G Y +++ D
Sbjct: 79 MKATEIDQLYNTAVN--QIMEATTDTQVIVGSLGPYGAYLSDGSEYTGAY--DLSKEDYF 134
Query: 408 AWHRPNVEALVRAGVDYLALETIPAEKEALALVK-LLREFPGQKAWLSFSCKDDTHTSHG 466
+H+ +EALV+ G++ ET+P +E A+V+ ++ + Q WLS + +D S
Sbjct: 135 QFHKTRIEALVKRGINDFVFETVPNFEEIKAIVEYIVPHYTNQTFWLSVTVNEDGDLSDD 194
Query: 467 ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTV-QTI-VYPNKGGVWD 524
+ + + ++I G+NC S V+ + + I + V QTI +YPN G ++
Sbjct: 195 TEFEK-LCAYIKQYAERIPVFGINC---SSVAGINKAISKGLKNVPQTIALYPNGGAQYN 250
Query: 525 SVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMID 573
+V +W ++ I+ +P WL++GV IIGGCC+ T I+ ++ I+
Sbjct: 251 AVEKEWESVGNQGLIVEQIPGWLDQGVKIIGGCCQTTPENIKSIKEAIE 299
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 117/240 (48%), Gaps = 29/240 (12%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSV- 89
LWSS L P + H+ F GADI+ +S YQA+ + +G E L + +V
Sbjct: 34 LWSSEVLKNNPTQIKQAHQAFTDVGADILLTSTYQASYQTFSDIGMKATEIDQLYNTAVN 93
Query: 90 QLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD 149
Q+M + D + ++ G S+GPYG L DGSEY+G Y +++ D
Sbjct: 94 QIMEATTDTQ-------------VIVG------SLGPYGAYLSDGSEYTGAY--DLSKED 132
Query: 150 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK-LLREFPGQKAWLSFSCKDDTHTS 208
+H+ +EALV+ G++ ET+P +E A+V+ ++ + Q WLS + +D S
Sbjct: 133 YFQFHKTRIEALVKRGINDFVFETVPNFEEIKAIVEYIVPHYTNQTFWLSVTVNEDGDLS 192
Query: 209 HGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTV-QTI-VYPNKGVK 266
+ + + ++I G+NC S V+ + + I + V QTI +YPN G +
Sbjct: 193 DDTEFEK-LCAYIKQYAERIPVFGINC---SSVAGINKAISKGLKNVPQTIALYPNGGAQ 248
>gi|359148099|ref|ZP_09181330.1| homocysteine methyltransferase, partial [Streptomyces sp. S4]
Length = 202
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 101/195 (51%), Gaps = 13/195 (6%)
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
AAS GPYG +L DGSEY G Y ++ A+L +HRP +E L AG D LALET+P E
Sbjct: 13 VAASAGPYGAMLADGSEYRGRY--GLSVAELERFHRPRLEVLAAAGPDVLALETVPDADE 70
Query: 436 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
A AL++ +R G AWLS+S T G+ ++ A A ++ A+GVNC P
Sbjct: 71 ARALLRAVRGL-GVPAWLSYSVAGG-RTRAGDRLADAFALAADA--PEVVAVGVNCCDPR 126
Query: 496 HVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNI 553
V VR + P V YPN G WD+ W + L +W+ G +
Sbjct: 127 EVEPAVRLAARVTGKPVV---AYPNSGERWDAAARAWRGPAQPLAGLAG--EWVAAGARL 181
Query: 554 IGGCCEVTSYEIQQM 568
+GGCC V + ++++
Sbjct: 182 VGGCCRVGAQTVREV 196
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 82/153 (53%), Gaps = 11/153 (7%)
Query: 114 LTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 173
+ G + AAS GPYG +L DGSEY G Y ++ A+L +HRP +E L AG D LALET
Sbjct: 7 VAGPLWVAASAGPYGAMLADGSEYRGRY--GLSVAELERFHRPRLEVLAAAGPDVLALET 64
Query: 174 IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGV 233
+P EA AL++ +R G AWLS+S T G+ ++ A A ++ A+GV
Sbjct: 65 VPDADEARALLRAVRGL-GVPAWLSYSVAGG-RTRAGDRLADAFALAADA--PEVVAVGV 120
Query: 234 NCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKG 264
NC P V VR + P V YPN G
Sbjct: 121 NCCDPREVEPAVRLAARVTGKPVV---AYPNSG 150
>gi|401421000|ref|XP_003874989.1| putative homocysteine S-methyltransferase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491225|emb|CBZ26491.1| putative homocysteine S-methyltransferase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 320
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 141/314 (44%), Gaps = 24/314 (7%)
Query: 261 PNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASI 320
PN V +LDG +++ +D PLWS L P+ + +++R +
Sbjct: 8 PNH-VVVLDGGLATELETRGCDLLD--PLWSGKALLESPQQIQDVALEYLRAGARCIIT- 63
Query: 321 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASI 380
Y + E+ G +TE +A +V +L + A S+
Sbjct: 64 ASYQITPQSLMEHRG-----LTEDAAVAAIEESVRIAQTVRERHLKEKPQAAPVFVAGSV 118
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GPYG L DGSEY G YV S E +HR + AL+RAG D LA+ET P+ E A+V
Sbjct: 119 GPYGAYLSDGSEYRGDYVRSAEE--FKEFHRLRIAALLRAGADVLAIETQPSAAEVRAIV 176
Query: 441 KLLR-EFPGQKAWLSFSCKDDTHTSHGELISS----AVTSCLLANPDQIQAIGVNCVRPS 495
LL+ E P +AW+SF+ + S E IS A L Q+ A+GVNC+
Sbjct: 177 ALLQEEHPHCRAWVSFTT---SRISPVEAISDGTKWADIISFLEKAPQVVAVGVNCISMG 233
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW----LDTEDEYSILHYVPQWLEEGV 551
S ++ + + T+ +VY N G +D+V W + S+ + P+W G
Sbjct: 234 EASAVLAHL-HTLTTMPLVVYTNSGESYDTVTRTWHPIAMSDGTTMSLAAFAPEWASHGA 292
Query: 552 NIIGGCCEVTSYEI 565
+IGGCC +I
Sbjct: 293 RLIGGCCRTGPSDI 306
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 131/265 (49%), Gaps = 25/265 (9%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG +++ +D PLWS L P+ + +++RAGA I ++ YQ
Sbjct: 11 VVVLDGGLATELETRGCDLLD--PLWSGKALLESPQQIQDVALEYLRAGARCIITASYQI 68
Query: 67 NVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKE-NQTPDINLNKTFNLLTGHIETAASI 124
+L + G +E A+ + +SV++ + +++ + P + A S+
Sbjct: 69 TPQSLMEHRGLTEDAAVAAIEESVRIAQTVRERHLKEKPQ----------AAPVFVAGSV 118
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSEY G YV S E +HR + AL+RAG D LA+ET P+ E A+V
Sbjct: 119 GPYGAYLSDGSEYRGDYVRSAEE--FKEFHRLRIAALLRAGADVLAIETQPSAAEVRAIV 176
Query: 185 KLLR-EFPGQKAWLSFSCKDDTHTSHGELISS----AVTSCLLANPDQIQAIGVNCVRPS 239
LL+ E P +AW+SF+ + S E IS A L Q+ A+GVNC+
Sbjct: 177 ALLQEEHPHCRAWVSFTT---SRISPVEAISDGTKWADIISFLEKAPQVVAVGVNCISMG 233
Query: 240 HVSTLVRCIKQSHPTVQTIVYPNKG 264
S ++ + + T+ +VY N G
Sbjct: 234 EASAVLAHL-HTLTTMPLVVYTNSG 257
>gi|329947449|ref|ZP_08294653.1| homocysteine S-methyltransferase [Actinomyces sp. oral taxon 170
str. F0386]
gi|328525199|gb|EGF52250.1| homocysteine S-methyltransferase [Actinomyces sp. oral taxon 170
str. F0386]
Length = 293
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 133/295 (45%), Gaps = 23/295 (7%)
Query: 282 KDVDGH-PLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDS 340
+ VD H LWS++ LT PEA H D++ + Y L G +GH D+
Sbjct: 8 RGVDTHNALWSALALTAAPEAVYAVHTDYLDAGARVI-TTNTYQATL-PGLRQAGH--DT 63
Query: 341 MTEADLIAWHRPNVEALVRAGVDYLALIK---PSISSQTAASIGPYGTVLRDGSEYSGHY 397
+ D+IA A R D + P A +GPYG L DGSEY+G Y
Sbjct: 64 VGARDVIA-------AGARLANDAARCFEREHPEEPVLVAGGLGPYGAYLADGSEYTGAY 116
Query: 398 -VDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF-PGQKAWLSF 455
VD ++ H P +E LV GVD ALET+P EA ALV +++ P + W+SF
Sbjct: 117 DVDVSEDSGFQEVHLPRIEVLVGEGVDLFALETLPRLNEAQALVTMVKGLSPQAECWVSF 176
Query: 456 SCK-DDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTI 514
+ D + G + A + A+GVNCV P V + +++ T + +
Sbjct: 177 QVRPDGVRLADGTPLVEAAAWAAGEE--AVVAVGVNCVAPDVVGRALPVLREV--TAKPL 232
Query: 515 V-YPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
V Y N G +D W ++ P W+ GV +IGGCC +I+++
Sbjct: 233 VAYSNSGDNYDPGTKTWKAGDEGGGFTALAPSWIAAGVRLIGGCCRTRPAQIREI 287
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 123/247 (49%), Gaps = 21/247 (8%)
Query: 24 KDVDGH-PLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEAL 82
+ VD H LWS++ LT PEA H D++ AGA +I ++ YQA + L + G+ A
Sbjct: 8 RGVDTHNALWSALALTAAPEAVYAVHTDYLDAGARVITTNTYQATLPGLRQAGHDTVGAR 67
Query: 83 DLLHKSVQLMN-SAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHY 141
D++ +L N +A+ E + P+ + A +GPYG L DGSEY+G Y
Sbjct: 68 DVIAAGARLANDAARCFEREHPEEP-----------VLVAGGLGPYGAYLADGSEYTGAY 116
Query: 142 -VDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF-PGQKAWLSF 199
VD ++ H P +E LV GVD ALET+P EA ALV +++ P + W+SF
Sbjct: 117 DVDVSEDSGFQEVHLPRIEVLVGEGVDLFALETLPRLNEAQALVTMVKGLSPQAECWVSF 176
Query: 200 SCK-DDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTI 258
+ D + G + A + A+GVNCV P V + +++ T + +
Sbjct: 177 QVRPDGVRLADGTPLVEAAAWAAGEE--AVVAVGVNCVAPDVVGRALPVLREV--TAKPL 232
Query: 259 V-YPNKG 264
V Y N G
Sbjct: 233 VAYSNSG 239
>gi|398025214|ref|XP_003865768.1| homocysteine S-methyltransferase, putative [Leishmania donovani]
gi|322504005|emb|CBZ39092.1| homocysteine S-methyltransferase, putative [Leishmania donovani]
Length = 379
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 131/266 (49%), Gaps = 25/266 (9%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V +LDG +++ +D PLWS L P+ + ++RAGA I ++ YQ
Sbjct: 69 QVVMLDGGLATELETRGCDLLD--PLWSGKVLLESPQRIRDVALAYLRAGARCIITASYQ 126
Query: 66 ANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKE-NQTPDINLNKTFNLLTGHIETAAS 123
+L + G +E A+ + +SV++ S +++ + P + A S
Sbjct: 127 ITPQSLMEHRGLTEDAAVAAIEESVRIAQSVRERHLKEKPQ----------AAPVFVAGS 176
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GPYG L DGSEY G YV S E +HR + AL+RAG D LA+ET P+ E A+
Sbjct: 177 VGPYGAYLADGSEYRGDYVRSAEE--FKEFHRLRIAALLRAGADVLAIETQPSAAEVRAI 234
Query: 184 VKLLR-EFPGQKAWLSFSCKDDTHTSHGELISS----AVTSCLLANPDQIQAIGVNCVRP 238
V LL+ E P +AW+SF+ + S E IS A L Q+ A+GVNC+ P
Sbjct: 235 VALLQEEHPNCRAWVSFT---TSRISPVEAISDGTKWADIISFLEKAPQVVAVGVNCI-P 290
Query: 239 SHVSTLVRCIKQSHPTVQTIVYPNKG 264
++ V + T+ +VY N G
Sbjct: 291 MAEASAVLAHLHTLTTMPLVVYTNSG 316
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 141/322 (43%), Gaps = 24/322 (7%)
Query: 261 PNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASI 320
PN+ V +LDG +++ +D PLWS L P+ + ++R +
Sbjct: 67 PNQ-VVMLDGGLATELETRGCDLLD--PLWSGKVLLESPQRIRDVALAYLRAGARCIIT- 122
Query: 321 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASI 380
Y + E+ G +TE +A +V +L + A S+
Sbjct: 123 ASYQITPQSLMEHRG-----LTEDAAVAAIEESVRIAQSVRERHLKEKPQAAPVFVAGSV 177
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GPYG L DGSEY G YV S E +HR + AL+RAG D LA+ET P+ E A+V
Sbjct: 178 GPYGAYLADGSEYRGDYVRSAEE--FKEFHRLRIAALLRAGADVLAIETQPSAAEVRAIV 235
Query: 441 KLLR-EFPGQKAWLSFSCKDDTHTSHGELISS----AVTSCLLANPDQIQAIGVNCVRPS 495
LL+ E P +AW+SF+ + S E IS A L Q+ A+GVNC+ P
Sbjct: 236 ALLQEEHPNCRAWVSFT---TSRISPVEAISDGTKWADIISFLEKAPQVVAVGVNCI-PM 291
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW----LDTEDEYSILHYVPQWLEEGV 551
++ V + T+ +VY N G +D+V W + S+ +W G
Sbjct: 292 AEASAVLAHLHTLTTMPLVVYTNSGESYDTVTRTWHPIPMRDGTTLSLAALAREWASHGA 351
Query: 552 NIIGGCCEVTSYEIQQMRIMID 573
++GGCC +I +D
Sbjct: 352 RLVGGCCRTGPSDIAGAAAALD 373
>gi|389864903|ref|YP_006367144.1| Homocysteine S-methyltransferase 4 [Modestobacter marinus]
gi|388487107|emb|CCH88664.1| Homocysteine S-methyltransferase 4 [Modestobacter marinus]
Length = 297
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 98/198 (49%), Gaps = 16/198 (8%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
AAS+GPYG L DGSEY+G YV + ADL A+HRP ++ L AG D LA ET+PA E
Sbjct: 105 AASVGPYGAYLADGSEYTGGYVSDLGVADLRAFHRPRLQVLAEAGADVLACETLPAAAEV 164
Query: 437 LALVKLLREFPGQK--AWLSFSCKDD----THTSHGELISSAVTSCLLANPDQIQAIGVN 490
A LL E G AWLS + D T GE ++ + + + D + A+GVN
Sbjct: 165 EA---LLGELAGLDVPAWLSLTAVVDDAGVPRTRRGERLAD--VAAMARDVDAVIAVGVN 219
Query: 491 CVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEG 550
C P V V + + YPN G WD+ +W + V WL G
Sbjct: 220 CTDPGAVPAAVAVATTASGK-PGVAYPNSGERWDATARRWTGQPG----VGDVSGWLAAG 274
Query: 551 VNIIGGCCEVTSYEIQQM 568
++GGCC V +++ +
Sbjct: 275 ARLVGGCCRVRPDDVRAI 292
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 132/286 (46%), Gaps = 38/286 (13%)
Query: 9 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG ++++ + H + LWS+ L +P A V H F AGA + ++ YQA
Sbjct: 14 VLDGGLSTELEAAGHDVTSA----LWSARLLRDDPGAVVAAHAAFAAAGARVATTASYQA 69
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+G E EA L+ +SVQL PD G + AAS+GP
Sbjct: 70 TFPGFAAVGIDETEAATLMTRSVQL------AREGAPD-----------GWV--AASVGP 110
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY+G YV + ADL A+HRP ++ L AG D LA ET+PA E A L
Sbjct: 111 YGAYLADGSEYTGGYVSDLGVADLRAFHRPRLQVLAEAGADVLACETLPAAAEVEA---L 167
Query: 187 LREFPGQK--AWLSFSCKDD----THTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 240
L E G AWLS + D T GE ++ + + + D + A+GVNC P
Sbjct: 168 LGELAGLDVPAWLSLTAVVDDAGVPRTRRGERLAD--VAAMARDVDAVIAVGVNCTDPGA 225
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDG 286
V V + + YPN G + D + + + DV G
Sbjct: 226 VPAAVAVATTASGK-PGVAYPNSGER-WDATARRWTGQPGVGDVSG 269
>gi|156337320|ref|XP_001619859.1| hypothetical protein NEMVEDRAFT_v1g223749 [Nematostella vectensis]
gi|156203827|gb|EDO27759.1| predicted protein [Nematostella vectensis]
Length = 156
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 89/176 (50%), Gaps = 43/176 (24%)
Query: 403 EADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTH 462
+ +L+ WHRP ++ALV G+D LA ETIPA+KE ALV+LL+EFPG KAWLS+SCKD +H
Sbjct: 20 KKNLMDWHRPQIQALVETGLDLLAFETIPAQKEGEALVQLLKEFPGTKAWLSYSCKDGSH 79
Query: 463 TSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGV 522
TSH E SA+ + +A+ +Q
Sbjct: 80 TSHNEDFVSAIMAA-VADSEQ--------------------------------------- 99
Query: 523 WDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEFNTK 578
V W DT + ++ Y+ +W++ G IGGCC + +I + R I +K
Sbjct: 100 ---VRYGWQDTGNVPPVVSYLDEWIDSGAQWIGGCCRTSLTDISETRAAIARRTSK 152
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
Query: 147 EADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTH 206
+ +L+ WHRP ++ALV G+D LA ETIPA+KE ALV+LL+EFPG KAWLS+SCKD +H
Sbjct: 20 KKNLMDWHRPQIQALVETGLDLLAFETIPAQKEGEALVQLLKEFPGTKAWLSYSCKDGSH 79
Query: 207 TSHGELISSAVTSCLLANPDQIQ 229
TSH E SA+ + +A+ +Q++
Sbjct: 80 TSHNEDFVSAIMAA-VADSEQVR 101
>gi|340794250|ref|YP_004759713.1| 5-methyltetrahydrofolate--homocysteine methyltransferase
[Corynebacterium variabile DSM 44702]
gi|340534160|gb|AEK36640.1| 5-methyltetrahydrofolate-homocysteinemethyltransferase
[Corynebacterium variabile DSM 44702]
Length = 325
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 142/319 (44%), Gaps = 32/319 (10%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG +++ D+ G LWS+ L P + H DF E A + TV
Sbjct: 16 ILDGGLGTRLEDRG-NDITGA-LWSAQILKDNPTEVRDAHADFFAAGAEVATACSYEVTV 73
Query: 327 LRDGSEYSG-HYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGT 385
DG +G D++ E++L+ R VE V A AAS+GPYG
Sbjct: 74 --DGLVATGMSRADAVVESELL--LRRAVE--VAREAASTAAETAGAPRWVAASVGPYGA 127
Query: 386 VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE 445
+G+EY G Y +T +L WHR + L AG D L ET+P+ +E AL RE
Sbjct: 128 GPGEGTEYDGAY--GLTVDELADWHRDRIRILASAGADVLIAETVPSVREIEALA---RE 182
Query: 446 FPGQK--AWLSFSC--------KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
F + A LS + D S G +S + ++A + +GVNCV
Sbjct: 183 FTAARVDALLSVTVLPRTPGTLADGVTLSDGTELSE--VARIVAETPAFRTVGVNCVSAD 240
Query: 496 HVSTLVR----CIKQSHPTVQTIVYPNKGGVWDSVHMKWL--DTEDEYSILHYVPQWLEE 549
VR + + + VYPN G +WD V+ WL E S++ VP +L+
Sbjct: 241 AALAAVRELGAGLAAAGRPLPLSVYPNSGELWDHVNRCWLPRTAEGTTSLIDAVPDFLDA 300
Query: 550 GVNIIGGCCEVTSYEIQQM 568
GV +IGGCC VT EI +
Sbjct: 301 GVRLIGGCCRVTPREITAI 319
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 121/277 (43%), Gaps = 38/277 (13%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ +LDG +++ D+ G LWS+ L P + H DF AGA++ + Y+
Sbjct: 13 RAVILDGGLGTRLEDRG-NDITGA-LWSAQILKDNPTEVRDAHADFFAAGAEVATACSYE 70
Query: 66 ANVDNLTKLGYSEQEALD----LLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETA 121
VD L G S +A+ LL ++V++ A++ + + + A
Sbjct: 71 VTVDGLVATGMSRADAVVESELLLRRAVEV---AREAASTAAETAGAPRW--------VA 119
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
AS+GPYG +G+EY G Y +T +L WHR + L AG D L ET+P+ +E
Sbjct: 120 ASVGPYGAGPGEGTEYDGAY--GLTVDELADWHRDRIRILASAGADVLIAETVPSVREIE 177
Query: 182 ALVKLLREFPGQK--AWLSFSC--------KDDTHTSHGELISSAVTSCLLANPDQIQAI 231
AL REF + A LS + D S G +S + ++A + +
Sbjct: 178 ALA---REFTAARVDALLSVTVLPRTPGTLADGVTLSDGTELSE--VARIVAETPAFRTV 232
Query: 232 GVNCVRPSHVSTLVR----CIKQSHPTVQTIVYPNKG 264
GVNCV VR + + + VYPN G
Sbjct: 233 GVNCVSADAALAAVRELGAGLAAAGRPLPLSVYPNSG 269
>gi|157877843|ref|XP_001687219.1| putative homocysteine S-methyltransferase [Leishmania major strain
Friedlin]
gi|68130294|emb|CAJ09606.1| putative homocysteine S-methyltransferase [Leishmania major strain
Friedlin]
Length = 339
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 128/265 (48%), Gaps = 25/265 (9%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG +++ D PLWS L P+ ++RAGA I ++ YQ
Sbjct: 30 VVMLDGGLATELETRGCDLRD--PLWSGKVLLESPQQLQNVALAYLRAGARCIITASYQI 87
Query: 67 NVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKE-NQTPDINLNKTFNLLTGHIETAASI 124
+L + +E A+ + +SV++ SA+++ + P I A S+
Sbjct: 88 TPQSLMEHRRLTEDAAVAAIEESVRIAQSARERHLREKPQ----------AAPIFVAGSV 137
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSEY G YV S E +HR + AL+RAG D LA+ET P+ E A+V
Sbjct: 138 GPYGAYLADGSEYRGDYVRSAEE--FKEFHRLRIAALLRAGADVLAIETQPSAAEVRAIV 195
Query: 185 KLLR-EFPGQKAWLSFSCKDDTHTSHGELISS----AVTSCLLANPDQIQAIGVNCVRPS 239
LL+ E P +AW+SF+ + S E IS A L QI A+GVNC+ P
Sbjct: 196 ALLQEEHPNCRAWVSFT---TSRISPVEAISDGTKWADIISFLEKAPQIVAVGVNCI-PM 251
Query: 240 HVSTLVRCIKQSHPTVQTIVYPNKG 264
++ V + T+ +VY N G
Sbjct: 252 AEASAVLAHLHTLTTMPLVVYTNSG 276
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 99/198 (50%), Gaps = 15/198 (7%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S+GPYG L DGSEY G YV S E +HR + AL+RAG D LA+ET P+ E
Sbjct: 134 AGSVGPYGAYLADGSEYRGDYVRSAEE--FKEFHRLRIAALLRAGADVLAIETQPSAAEV 191
Query: 437 LALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISS----AVTSCLLANPDQIQAIGVNC 491
A+V LL+ E P +AW+SF+ + S E IS A L QI A+GVNC
Sbjct: 192 RAIVALLQEEHPNCRAWVSFT---TSRISPVEAISDGTKWADIISFLEKAPQIVAVGVNC 248
Query: 492 VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW----LDTEDEYSILHYVPQWL 547
+ P ++ V + T+ +VY N G +D+V W + S+ +W
Sbjct: 249 I-PMAEASAVLAHLHTLTTMPLVVYTNSGESYDAVTRTWHPISMSDGTTLSLGALAREWA 307
Query: 548 EEGVNIIGGCCEVTSYEI 565
G ++GGCC +I
Sbjct: 308 SHGARLVGGCCRTGPSDI 325
>gi|388502578|gb|AFK39355.1| unknown [Medicago truncatula]
Length = 218
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 105/192 (54%), Gaps = 18/192 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACV--ETHRDFIRAGADIIQSSCYQA 66
++DG +++ RH D PLWS+ L + P++ + + H D++ GADII ++ YQA
Sbjct: 18 IIDGGLATELERHGADLND--PLWSAKCLISIPQSHLIRQVHLDYLENGADIITTASYQA 75
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD---------KENQTPDINLNKTFNLLTGH 117
+ + G+S +E+ ++L +SV++ A+D + D + K +L
Sbjct: 76 TIQGFKEKGFSNEESENMLRRSVEIACEARDLYYERCAACSSGKNADDRILKQRPILI-- 133
Query: 118 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 177
AAS+G YG L DGSEYSG+Y D++T L +HR V+ L A D LA ETIP +
Sbjct: 134 ---AASVGSYGAYLADGSEYSGNYGDAITLKTLKDFHRRRVQVLADASADLLAFETIPNK 190
Query: 178 KEALALVKLLRE 189
EA A +LL E
Sbjct: 191 IEAHAFAELLEE 202
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 24/210 (11%)
Query: 251 SHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACV--ETHRD 308
S + ++ G ++DG +++ RH D PLWS+ L + P++ + + H D
Sbjct: 2 SSSLISDFLHRAGGTAIIDGGLATELERHGADLND--PLWSAKCLISIPQSHLIRQVHLD 59
Query: 309 FIRGHIETAASI---GPYGTVLRDGSE--YSGHYVDSM--------TEADLIAWHRPNVE 355
++ E A I Y ++ E +S ++M EA + + R
Sbjct: 60 YL----ENGADIITTASYQATIQGFKEKGFSNEESENMLRRSVEIACEARDLYYERCAAC 115
Query: 356 ALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVE 415
+ + D + +P + AAS+G YG L DGSEYSG+Y D++T L +HR V+
Sbjct: 116 SSGKNADDRILKQRPIL---IAASVGSYGAYLADGSEYSGNYGDAITLKTLKDFHRRRVQ 172
Query: 416 ALVRAGVDYLALETIPAEKEALALVKLLRE 445
L A D LA ETIP + EA A +LL E
Sbjct: 173 VLADASADLLAFETIPNKIEAHAFAELLEE 202
>gi|375103105|ref|ZP_09749368.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Saccharomonospora cyanea
NA-134]
gi|374663837|gb|EHR63715.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Saccharomonospora cyanea
NA-134]
Length = 343
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 125/266 (46%), Gaps = 24/266 (9%)
Query: 4 ICKVKLLDGS-FTSQVSRHTIKDVDGH----PLWSSVYLTTEPEACVETHRDFIRAGADI 58
+ V+L DG S T + GH LWS+ L P V HR F AGA +
Sbjct: 41 VVAVELFDGGPVVSDGGLATELEARGHDLTDALWSARLLLDAPGEIVAAHRAFYEAGAVV 100
Query: 59 IQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHI 118
++ YQA+ + G E LLH+SV L A D+ + + + F
Sbjct: 101 ATTASYQASFPGFAERGLDRGEVATLLHRSVALARQAGDEVSG----DGRRRF------- 149
Query: 119 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 178
AAS+GPYG L DGSEY G Y +T A L WH P +E L A D LA+ETIP
Sbjct: 150 -VAASVGPYGAALADGSEYRGDY--GLTVAQLRDWHLPRLETLAEAEPDLLAVETIPDVV 206
Query: 179 EALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 238
EA ALV L AWL+++ D T G+ ++ A A+ ++ A+GVNC P
Sbjct: 207 EAEALVGALAGL-DVPAWLAYTVDGD-RTRAGQPLAEAFAVAAAAD--EVVAVGVNCCAP 262
Query: 239 SHVSTLVRCIKQSHPTVQTIVYPNKG 264
+ V+ + C + +VYPN G
Sbjct: 263 ADVTPAIACARAVTDK-PVVVYPNSG 287
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 144/323 (44%), Gaps = 25/323 (7%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVET 305
++ PTV + + G + DG +++ H + D LWS+ L P V
Sbjct: 34 VRAGAPTVVAVELFDGGPVVSDGGLATELEARGHDLTDA----LWSARLLLDAPGEIVAA 89
Query: 306 HRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL 365
HR F E A + + ++ +D A L+ HR AL R D +
Sbjct: 90 HRAFY----EAGAVVATTASYQASFPGFAERGLDRGEVATLL--HRSV--ALARQAGDEV 141
Query: 366 ALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL 425
+ AAS+GPYG L DGSEY G Y +T A L WH P +E L A D L
Sbjct: 142 S--GDGRRRFVAASVGPYGAALADGSEYRGDY--GLTVAQLRDWHLPRLETLAEAEPDLL 197
Query: 426 ALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ 485
A+ETIP EA ALV L AWL+++ D T G+ ++ A A+ ++
Sbjct: 198 AVETIPDVVEAEALVGALAGL-DVPAWLAYTVDGD-RTRAGQPLAEAFAVAAAAD--EVV 253
Query: 486 AIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQ 545
A+GVNC P+ V+ + C + +VYPN G WD+ W YS Q
Sbjct: 254 AVGVNCCAPADVTPAIACARAVTDK-PVVVYPNSGESWDARQRTWTGPS-RYSP-ELARQ 310
Query: 546 WLEEGVNIIGGCCEVTSYEIQQM 568
W+ EG ++GGCC V +I +
Sbjct: 311 WVAEGARVVGGCCRVRPSDIADI 333
>gi|147846114|emb|CAN82018.1| hypothetical protein VITISV_003417 [Vitis vinifera]
Length = 347
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 139/302 (46%), Gaps = 49/302 (16%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE------------------------ 42
V ++DG +++ RH D PLWS+ L + P
Sbjct: 22 VAVIDGGLATELERHGADLND--PLWSAKCLLSSPHLIRTGSRFVNLGWYSLRLLGVKNQ 79
Query: 43 --ACVE---THRDFIRAGADIIQSSCYQAN-----VDNLTKLGYSEQEALD-----LLHK 87
A E H D++ AGADII ++ YQ N V+ L G + +L+ L K
Sbjct: 80 NVAVWEFKMVHLDYLEAGADIIITASYQVNSAYIYVNRLLFRGLKLEASLEEKVKPCLGK 139
Query: 88 SVQLMNSAK----DKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVD 143
SV++ A+ D+ + + L I AAS+G YG L DGSEYSG Y D
Sbjct: 140 SVEIACEARKMYYDRCIEFACDDXEDGRILKHRPILVAASVGSYGAYLADGSEYSGIYGD 199
Query: 144 SMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQ-KAWLSFSCK 202
+T L +HR V+ L AG D +A ET+P + EA A +LL E + AW SF+ K
Sbjct: 200 EITVETLKDFHRRRVQILADAGADLIAFETVPNKLEAQAYAELLEEENIKIPAWFSFNSK 259
Query: 203 DDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPN 262
D H G+ + V+ + + ++ ++G+NC P + L+ IK+ T ++YPN
Sbjct: 260 DGVHVVSGDSLLECVS--IAESCKKVVSVGINCTPPRFIHGLILSIKKV-TTKPILIYPN 316
Query: 263 KG 264
G
Sbjct: 317 SG 318
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 86/157 (54%), Gaps = 4/157 (2%)
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
AAS+G YG L DGSEYSG Y D +T L +HR V+ L AG D +A ET+P + E
Sbjct: 176 VAASVGSYGAYLADGSEYSGIYGDEITVETLKDFHRRRVQILADAGADLIAFETVPNKLE 235
Query: 436 ALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
A A +LL E + AW SF+ KD H G+ + V+ + + ++ ++G+NC P
Sbjct: 236 AQAYAELLEEENIKIPAWFSFNSKDGVHVVSGDSLLECVS--IAESCKKVVSVGINCTPP 293
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWL 531
+ L+ IK+ T ++YPN G +D +W+
Sbjct: 294 RFIHGLILSIKKV-TTKPILIYPNSGESYDPEQKEWV 329
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 301 ACVETHRDFIRGH--IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV 358
AC + I H I AAS+G YG L DGSEYSG Y D +T L +HR V+ L
Sbjct: 159 ACDDXEDGRILKHRPILVAASVGSYGAYLADGSEYSGIYGDEITVETLKDFHRRRVQILA 218
Query: 359 RAGVDYLAL 367
AG D +A
Sbjct: 219 DAGADLIAF 227
>gi|254573984|ref|XP_002494101.1| S-adenosylmethionine-homocysteine methyltransferase [Komagataella
pastoris GS115]
gi|238033900|emb|CAY71922.1| S-adenosylmethionine-homocysteine methyltransferase [Komagataella
pastoris GS115]
Length = 321
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 144/320 (45%), Gaps = 27/320 (8%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
K ++LDG+ +++ + I D+ LWS L PE + H +I+ E
Sbjct: 14 KRCRVLDGALGTELEKLGI-DIKSR-LWSGKALFYSPETITQIHSSYIQAGAEL------ 65
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
+L + S + + D + R V+ D + + ++ SIG
Sbjct: 66 ---ILTCTYQLSDQGLKDLGIDDPDVYDRA-----VKLAKDAVDQNEGENKAKIVGSIGS 117
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV-RAGVDYLALETIPAEKEALALVK 441
YG L G EY+G Y ++++++L +HR +++L+ VD + ETIP EA LV
Sbjct: 118 YGAYLSGGEEYTGEY-GAISKSELEEFHRVRLQSLLTNPDVDLIGFETIPNILEAETLVV 176
Query: 442 LLREFP-----GQKAWLSFSCKDDTHTS---HGELISSAVTSCLLANPDQIQAIGVNCVR 493
L + ++SF+C+++++ S G I + ++ AIG NC
Sbjct: 177 LFNALATSLNVDKGYYMSFNCREESNQSVIADGTSIPEVSDRLSKLDVSRMYAIGTNCCS 236
Query: 494 PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNI 553
S + V + H + IVYPN G +D KWL E + I V WL+ V I
Sbjct: 237 ISTANGAVELFSK-HTNLPLIVYPNSGERYDKTEKKWLPGECDQKITDIVVNWLQLNVKI 295
Query: 554 IGGCCEVTSYEIQQMRIMID 573
IGGCC + I+Q+R ++D
Sbjct: 296 IGGCCRTNPHFIRQLRDIVD 315
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 29/268 (10%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ ++LDG+ +++ + I D+ LWS L PE + H +I+AGA++I + YQ
Sbjct: 15 RCRVLDGALGTELEKLGI-DIKSR-LWSGKALFYSPETITQIHSSYIQAGAELILTCTYQ 72
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
+ L LG + + D ++V+L AKD +Q N K SIG
Sbjct: 73 LSDQGLKDLGIDDPDVYD---RAVKL---AKDAVDQNEGENKAK----------IVGSIG 116
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV-RAGVDYLALETIPAEKEALALV 184
YG L G EY+G Y ++++++L +HR +++L+ VD + ETIP EA LV
Sbjct: 117 SYGAYLSGGEEYTGEY-GAISKSELEEFHRVRLQSLLTNPDVDLIGFETIPNILEAETLV 175
Query: 185 KLLREFP-----GQKAWLSFSCKDDTHTS---HGELISSAVTSCLLANPDQIQAIGVNCV 236
L + ++SF+C+++++ S G I + ++ AIG NC
Sbjct: 176 VLFNALATSLNVDKGYYMSFNCREESNQSVIADGTSIPEVSDRLSKLDVSRMYAIGTNCC 235
Query: 237 RPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
S + V + H + IVYPN G
Sbjct: 236 SISTANGAVELFSK-HTNLPLIVYPNSG 262
>gi|402586382|gb|EJW80320.1| hypothetical protein WUBG_08773 [Wuchereria bancrofti]
Length = 208
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 101/188 (53%), Gaps = 15/188 (7%)
Query: 26 VDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL-TKLGYSEQEALDL 84
+ + LWS L P+ ++ H+ FI AG+DII ++ YQA ++ + + G ++ A
Sbjct: 2 LQNNSLWSCAALFDNPDLILQVHKRFIEAGSDIILTNSYQACINTMMSSRGMTKNAAESS 61
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
L K V L A ++ + + ++ S+GPYG + DGSEY+G+YVD
Sbjct: 62 LKKLVSLAEQAINECS-------------VREKVKIVGSVGPYGVIFNDGSEYNGYYVDE 108
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFP-GQKAWLSFSCKD 203
+ + L+ +H L++AG+ +A ET+P+ KEALA++K W+SFSCK+
Sbjct: 109 IEQQVLVDYHMQQTIPLLQAGLKVIAYETVPSYKEALAILKAADAIGYSYNFWISFSCKN 168
Query: 204 DTHTSHGE 211
T+H E
Sbjct: 169 GKQTNHNE 176
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 17/188 (9%)
Query: 284 VDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIGPYGTVLRDGSEYSGHYVDS 340
+ + LWS L P+ ++ H+ FI I T + T++ S
Sbjct: 2 LQNNSLWSCAALFDNPDLILQVHKRFIEAGSDIILTNSYQACINTMMSSRGMTKNAAESS 61
Query: 341 MTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDS 400
+ + +A N E VR V + S+GPYG + DGSEY+G+YVD
Sbjct: 62 LKKLVSLAEQAIN-ECSVREKV------------KIVGSVGPYGVIFNDGSEYNGYYVDE 108
Query: 401 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFP-GQKAWLSFSCKD 459
+ + L+ +H L++AG+ +A ET+P+ KEALA++K W+SFSCK+
Sbjct: 109 IEQQVLVDYHMQQTIPLLQAGLKVIAYETVPSYKEALAILKAADAIGYSYNFWISFSCKN 168
Query: 460 DTHTSHGE 467
T+H E
Sbjct: 169 GKQTNHNE 176
>gi|298714389|emb|CBJ27446.1| Homocysteine S-methyltransferase [Ectocarpus siliculosus]
Length = 436
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 138/335 (41%), Gaps = 82/335 (24%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +++ D+ G LWS+ L P TH + RAGAD+ S+ YQA+
Sbjct: 17 VLDGGLATELEAQG-ADLTGD-LWSAALLADNPSIIRNTHLAYFRAGADVATSASYQASF 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKD------------------------------- 97
+ + G + A +LL SV+L A+D
Sbjct: 75 EGFLRKGIGPERAEELLLLSVRLAVEARDQFWAEYQEERPASRPAPTKPQTLRQPSQPTA 134
Query: 98 ---------KENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEA 148
K++Q P + + AAS+G YG VL DGSEY G YVD+
Sbjct: 135 TAIEEEENAKQHQQPVRGSDGRRHRRRLRPLVAASLGCYGAVLADGSEYRGDYVDTPA-G 193
Query: 149 DLIAWHRPNVEALVRA-GVDYLALETIPAEKEALALVKLLREF-PGQKAWLSFSCKDDTH 206
L +H +E L RA GVD + ET+P E A++ LL++F P A +S SCKDD H
Sbjct: 194 SLKEFHARRLEILARADGVDMVVFETVPCLAEVRAILSLLQDFRPRVSAVISVSCKDDQH 253
Query: 207 TSHGELISS----------------------AVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
GE + A T+ P + A+GVNC PSH +
Sbjct: 254 LRSGERLHDFADLIWRHAEEQDAAEGPPAVVATTTTTTTRPACVAAVGVNCTSPSHAAGT 313
Query: 245 VR--------------CIKQSHPT-VQTIVYPNKG 264
+R +++ P+ V + YPN G
Sbjct: 314 LRALAAARARPDARHGAPRETPPSRVALVAYPNSG 348
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 106/244 (43%), Gaps = 52/244 (21%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA-GVDYLALETIPAEKE 435
AAS+G YG VL DGSEY G YVD+ L +H +E L RA GVD + ET+P E
Sbjct: 167 AASLGCYGAVLADGSEYRGDYVDTPA-GSLKEFHARRLEILARADGVDMVVFETVPCLAE 225
Query: 436 ALALVKLLREF-PGQKAWLSFSCKDDTHTSHGELISS----------------------A 472
A++ LL++F P A +S SCKDD H GE + A
Sbjct: 226 VRAILSLLQDFRPRVSAVISVSCKDDQHLRSGERLHDFADLIWRHAEEQDAAEGPPAVVA 285
Query: 473 VTSCLLANPDQIQAIGVNCVRPSHVSTLVR--------------CIKQSHPT-VQTIVYP 517
T+ P + A+GVNC PSH + +R +++ P+ V + YP
Sbjct: 286 TTTTTTTRPACVAAVGVNCTSPSHAAGTLRALAAARARPDARHGAPRETPPSRVALVAYP 345
Query: 518 NKGGVWDSVHMKWLDT---EDEYSILHYVP---------QWLEEGVNIIGGCCEVTSYEI 565
N G WD+ W++ D + +W G ++GGCC +
Sbjct: 346 NSGEEWDASVRDWVEGTGLRDREAGGGGGAEEFGRMARDEWFAAGATVVGGCCRTRPAHV 405
Query: 566 QQMR 569
++R
Sbjct: 406 AEIR 409
>gi|328354079|emb|CCA40476.1| homocysteine methyltransferase (EC:2.1.1.10) [Komagataella pastoris
CBS 7435]
Length = 315
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 144/320 (45%), Gaps = 27/320 (8%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
K ++LDG+ +++ + I D+ LWS L PE + H +I+ E
Sbjct: 8 KRCRVLDGALGTELEKLGI-DIKSR-LWSGKALFYSPETITQIHSSYIQAGAEL------ 59
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
+L + S + + D + R V+ D + + ++ SIG
Sbjct: 60 ---ILTCTYQLSDQGLKDLGIDDPDVYDRA-----VKLAKDAVDQNEGENKAKIVGSIGS 111
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV-RAGVDYLALETIPAEKEALALVK 441
YG L G EY+G Y ++++++L +HR +++L+ VD + ETIP EA LV
Sbjct: 112 YGAYLSGGEEYTGEY-GAISKSELEEFHRVRLQSLLTNPDVDLIGFETIPNILEAETLVV 170
Query: 442 LLREFP-----GQKAWLSFSCKDDTHTS---HGELISSAVTSCLLANPDQIQAIGVNCVR 493
L + ++SF+C+++++ S G I + ++ AIG NC
Sbjct: 171 LFNALATSLNVDKGYYMSFNCREESNQSVIADGTSIPEVSDRLSKLDVSRMYAIGTNCCS 230
Query: 494 PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNI 553
S + V + H + IVYPN G +D KWL E + I V WL+ V I
Sbjct: 231 ISTANGAVELFSK-HTNLPLIVYPNSGERYDKTEKKWLPGECDQKITDIVVNWLQLNVKI 289
Query: 554 IGGCCEVTSYEIQQMRIMID 573
IGGCC + I+Q+R ++D
Sbjct: 290 IGGCCRTNPHFIRQLRDIVD 309
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 29/268 (10%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ ++LDG+ +++ + I D+ LWS L PE + H +I+AGA++I + YQ
Sbjct: 9 RCRVLDGALGTELEKLGI-DIKSR-LWSGKALFYSPETITQIHSSYIQAGAELILTCTYQ 66
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
+ L LG + + D ++V+L AKD +Q N K SIG
Sbjct: 67 LSDQGLKDLGIDDPDVYD---RAVKL---AKDAVDQNEGENKAK----------IVGSIG 110
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV-RAGVDYLALETIPAEKEALALV 184
YG L G EY+G Y ++++++L +HR +++L+ VD + ETIP EA LV
Sbjct: 111 SYGAYLSGGEEYTGEY-GAISKSELEEFHRVRLQSLLTNPDVDLIGFETIPNILEAETLV 169
Query: 185 KLLREFP-----GQKAWLSFSCKDDTHTS---HGELISSAVTSCLLANPDQIQAIGVNCV 236
L + ++SF+C+++++ S G I + ++ AIG NC
Sbjct: 170 VLFNALATSLNVDKGYYMSFNCREESNQSVIADGTSIPEVSDRLSKLDVSRMYAIGTNCC 229
Query: 237 RPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
S + V + H + IVYPN G
Sbjct: 230 SISTANGAVELFSK-HTNLPLIVYPNSG 256
>gi|380302732|ref|ZP_09852425.1| homocysteine methyltransferase [Brachybacterium squillarum M-6-3]
Length = 308
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 121/258 (46%), Gaps = 29/258 (11%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG + ++ + DV G LWS+ L + PE HRDF+ AGA ++ + YQ +
Sbjct: 19 VLDGGLGTHLADCGL-DVTG-ALWSAEVLRSRPEEVRAAHRDFLDAGAQVLTTCSYQVSA 76
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
D L +G EA DLL SV+L D+ + G ASIGPYG
Sbjct: 77 DGLAAVGADPTEAEDLLRTSVRLARETADE---------------VEGPRWVVASIGPYG 121
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
G+EY G Y +T A+L AWHR + L G D L ET+P+ +E ALV
Sbjct: 122 AGPGRGTEYDGDY--GLTVAELRAWHRDRIAVLDDTGADLLLAETVPSIREVEALVD--- 176
Query: 189 EFPGQK--AWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
E G++ A LS + + T G +S A +LA + A+GVNC T
Sbjct: 177 ELDGRRTPAALSLTVR-GTVLGDGTPVSEAAR--ILAG-SSLVAVGVNCCTVPDALT-AH 231
Query: 247 CIKQSHPTVQTIVYPNKG 264
I + H + + YPN G
Sbjct: 232 AILREHSDLPLMAYPNSG 249
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 96/243 (39%), Gaps = 48/243 (19%)
Query: 275 QVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYS 334
QVS + V P + L T ET D + G ASIGPYG G+EY
Sbjct: 73 QVSADGLAAVGADPTEAEDLLRTSVRLARETA-DEVEGPRWVVASIGPYGAGPGRGTEYD 131
Query: 335 GHYVDSMTEADLIAWHRPNVEALVRAGVD-YLALIKPSI-------------SSQTAASI 380
G Y +T A+L AWHR + L G D LA PSI + A S+
Sbjct: 132 GDY--GLTVAELRAWHRDRIAVLDDTGADLLLAETVPSIREVEALVDELDGRRTPAALSL 189
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GTVL DG+ S A ++A +LV GV+ T+P A A++
Sbjct: 190 TVRGTVLGDGTPVS-------EAARILAG-----SSLVAVGVNCC---TVPDALTAHAIL 234
Query: 441 KLLREFP-------GQ------KAWLSFSCKDDTHTSHGELISSAV---TSCLLANPDQI 484
+ + P G+ +AW S + D S L+ + V C P+QI
Sbjct: 235 REHSDLPLMAYPNSGESWDHEARAWREGSAEQDLVASAPGLLGAGVRLLGGCCRVGPEQI 294
Query: 485 QAI 487
+
Sbjct: 295 SRL 297
>gi|238878738|gb|EEQ42376.1| hypothetical protein CAWG_00585 [Candida albicans WO-1]
Length = 311
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 22/239 (9%)
Query: 28 GHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTK-LGYSEQEALDLLH 86
G PLWS L T PE + H D+I AGAD+I +S YQ + +L K +GY +A+ L +
Sbjct: 37 GSPLWSGQVLITNPELVEQVHLDYINAGADMIITSTYQTSYASLHKYIGYDMDQAIALWN 96
Query: 87 KSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMT 146
++ + +A K + I A SIGPY T+L +GSEY+G Y +T
Sbjct: 97 SALNVAKNAVKKSGRDDVI--------------IAGSIGPYATLLANGSEYNGDY-QGVT 141
Query: 147 EADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTH 206
+ +LI +H P E + VD + +ETIP+ +E ++ L +++ ++ ++S + + +
Sbjct: 142 DEELIEYHTPLFEFYENSDVDIICIETIPSFQELKVIIGLAKKYTSKEFFISINPQTGSA 201
Query: 207 TSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
S G LI A + +P + A+G+NC +V + + +YPN G
Sbjct: 202 LSDGTSLIEVAQLFAEINDP-RFVAVGINCTSYENVDQISTYLTD----FPLFIYPNLG 255
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 143/295 (48%), Gaps = 26/295 (8%)
Query: 286 GHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD 345
G PLWS L T PE + H D+I + + Y T +Y G+ +D
Sbjct: 37 GSPLWSGQVLITNPELVEQVHLDYINAGADMIIT-STYQTSYASLHKYIGYDMDQA---- 91
Query: 346 LIAWHRP-NV--EALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMT 402
+ W+ NV A+ ++G D + + A SIGPY T+L +GSEY+G Y +T
Sbjct: 92 IALWNSALNVAKNAVKKSGRDDVII---------AGSIGPYATLLANGSEYNGDY-QGVT 141
Query: 403 EADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTH 462
+ +LI +H P E + VD + +ETIP+ +E ++ L +++ ++ ++S + + +
Sbjct: 142 DEELIEYHTPLFEFYENSDVDIICIETIPSFQELKVIIGLAKKYTSKEFFISINPQTGSA 201
Query: 463 TSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGG 521
S G LI A + +P + A+G+NC +V + + +YPN G
Sbjct: 202 LSDGTSLIEVAQLFAEINDP-RFVAVGINCTSYENVDQISTYLTD----FPLFIYPNLGF 256
Query: 522 VWDSVHMKWLDTE-DEYSILHYVPQWLE-EGVNIIGGCCEVTSYEIQQMRIMIDE 574
V+D+ K++ E + V +WL V IGGCC T EI+Q+ +I++
Sbjct: 257 VYDTTVHKFVSKALQESTWSKSVAKWLAFPNVKAIGGCCSTTPAEIKQVAQLINQ 311
>gi|149247440|ref|XP_001528132.1| hypothetical protein LELG_00652 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448086|gb|EDK42474.1| hypothetical protein LELG_00652 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 326
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 121/240 (50%), Gaps = 8/240 (3%)
Query: 30 PLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTK-LGYSEQEALDLLHKS 88
PLWS L PE + H +I AG+++I +S YQ + D+L K S+++ L++ +S
Sbjct: 36 PLWSGQVLLDAPELIQKVHEMYIGAGSEVIFTSTYQLSYDSLRKHTTLSDEQILEVWQRS 95
Query: 89 VQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEA 148
+ L+ +A ++T K G + A SIGPY L +GSEY+G Y ++T+
Sbjct: 96 IDLVRAAALSIDETARYTKEKESRGEPGKVHIAGSIGPYAAYLANGSEYTGDY-GNVTDE 154
Query: 149 DLIAWHRPNVEALVR-AGVDYLALETIPAEKEALALVKLLREFPGQKAWL-SFSCKDDTH 206
L A+H P +E VD +A ETIP +E A+ KL++ +K L S +C++ +
Sbjct: 155 QLEAFHTPMLEFFTENEAVDLIAFETIPNFQELKAVTKLVKRLNCKKPVLFSITCQNLDN 214
Query: 207 TSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGVK 266
+ G + P + + +G+NCV TLV+ I + VYPN G +
Sbjct: 215 LTDGTPLLEVKKYLDFCLPKEQKILGINCVE----YTLVQGIMSHFAGFKFYVYPNLGFE 270
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 136/312 (43%), Gaps = 46/312 (14%)
Query: 288 PLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMT----- 342
PLWS L PE + H +I E + S Y Y DS+
Sbjct: 36 PLWSGQVLLDAPELIQKVHEMYIGAGSEVIFT-----------STYQLSY-DSLRKHTTL 83
Query: 343 --EADLIAWHRPNVEALVRAG---VDYLALIKPSISSQ-------TAASIGPYGTVLRDG 390
E L W R LVRA +D A S+ A SIGPY L +G
Sbjct: 84 SDEQILEVWQRSI--DLVRAAALSIDETARYTKEKESRGEPGKVHIAGSIGPYAAYLANG 141
Query: 391 SEYSGHYVDSMTEADLIAWHRPNVEALVR-AGVDYLALETIPAEKEALALVKLLREFPGQ 449
SEY+G Y ++T+ L A+H P +E VD +A ETIP +E A+ KL++ +
Sbjct: 142 SEYTGDY-GNVTDEQLEAFHTPMLEFFTENEAVDLIAFETIPNFQELKAVTKLVKRLNCK 200
Query: 450 KAWL-SFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSH 508
K L S +C++ + + G + P + + +G+NCV TLV+ I
Sbjct: 201 KPVLFSITCQNLDNLTDGTPLLEVKKYLDFCLPKEQKILGINCVE----YTLVQGIMSHF 256
Query: 509 PTVQTIVYPNKGGVWDSVHMKWL----DTEDEYSILHYVPQWL-EEGVNIIGGCCEVTSY 563
+ VYPN G +D +++ +ED++ + +V +E V IGGCC
Sbjct: 257 AGFKFYVYPNLGFEYDLEKHQFVIKEGRSEDDWRL--FVENLASKEAVIGIGGCCNTGVK 314
Query: 564 EIQQM-RIMIDE 574
EI+Q+ ++M E
Sbjct: 315 EIEQISQVMYKE 326
>gi|404416481|ref|ZP_10998301.1| homocysteine methyltransferase [Staphylococcus arlettae CVD059]
gi|403491138|gb|EJY96663.1| homocysteine methyltransferase [Staphylococcus arlettae CVD059]
Length = 301
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 131/286 (45%), Gaps = 30/286 (10%)
Query: 289 LWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA 348
LWSS L +P + H DF + G + S Y Y I
Sbjct: 34 LWSSEILKNDPAKIQQAHADFTQA-----------GADILLTSTYQASYA----TFSAIG 78
Query: 349 WHRPNVEALVRAGVDYLALIKPSISSQ--TAASIGPYGTVLRDGSEYSGHYVDSMTEADL 406
++AL+ D + +K + + Q S+GPYG L DGSEY+G Y +++ +D
Sbjct: 79 LSDDAIDALI---ADAVYQVKQATTEQQVIVGSLGPYGAYLSDGSEYTGTY--NISRSDY 133
Query: 407 IAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKA--WLSFSCKDDTHTS 464
+ +HR +++L+ GV ETIP+ E A+V + QK WLS + D + S
Sbjct: 134 VDFHRQRIDSLIAQGVHDFVFETIPSFAEIQAIVTAIIPLYNQKQTFWLSVTVDDAGNLS 193
Query: 465 HGELISSAVTSCLLANPDQIQAI-GVNCVRPSHVSTLVRCIKQSHPTVQTI-VYPNKGGV 522
G + L + D I I G+NC + ++ + S P QTI +YPN G
Sbjct: 194 DGTAFETLRD--YLQDYDPILPIFGINCSTVTGINNTIARGLLSLP--QTIALYPNGGAH 249
Query: 523 WDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+D+ W +E +IL V W ++ V IIGGCC+ T I+++
Sbjct: 250 YDAESKTWSSDSNEQAILDCVTSWAQQNVGIIGGCCQTTPQTIERI 295
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 115/238 (48%), Gaps = 28/238 (11%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQ 90
LWSS L +P + H DF +AGADI+ +S YQA+ + +G S+ L+ +V
Sbjct: 34 LWSSEILKNDPAKIQQAHADFTQAGADILLTSTYQASYATFSAIGLSDDAIDALIADAVY 93
Query: 91 LMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADL 150
+ A ++ ++ G S+GPYG L DGSEY+G Y +++ +D
Sbjct: 94 QVKQATTEQ------------QVIVG------SLGPYGAYLSDGSEYTGTY--NISRSDY 133
Query: 151 IAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKA--WLSFSCKDDTHTS 208
+ +HR +++L+ GV ETIP+ E A+V + QK WLS + D + S
Sbjct: 134 VDFHRQRIDSLIAQGVHDFVFETIPSFAEIQAIVTAIIPLYNQKQTFWLSVTVDDAGNLS 193
Query: 209 HGELISSAVTSCLLANPDQIQAI-GVNCVRPSHVSTLVRCIKQSHPTVQTI-VYPNKG 264
G + L + D I I G+NC + ++ + S P QTI +YPN G
Sbjct: 194 DGTAFETLRD--YLQDYDPILPIFGINCSTVTGINNTIARGLLSLP--QTIALYPNGG 247
>gi|254390558|ref|ZP_05005773.1| homocysteine methyltransferase [Streptomyces clavuligerus ATCC
27064]
gi|294815640|ref|ZP_06774283.1| Homocysteine methyltransferase [Streptomyces clavuligerus ATCC
27064]
gi|326443989|ref|ZP_08218723.1| homocysteine methyltransferase [Streptomyces clavuligerus ATCC
27064]
gi|197704260|gb|EDY50072.1| homocysteine methyltransferase [Streptomyces clavuligerus ATCC
27064]
gi|294328239|gb|EFG09882.1| Homocysteine methyltransferase [Streptomyces clavuligerus ATCC
27064]
Length = 306
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 125/256 (48%), Gaps = 24/256 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG ++Q++ D PLW++ L PE H + AGA ++ S+ YQA+
Sbjct: 17 VLDGGLSNQLAAQGCDLSD--PLWTARLLKDGPEQLAAAHTAYADAGAQVLISASYQASH 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ + G E+ LL +SV+L +A D + AAS+GPYG
Sbjct: 75 EGFRRAGLGGAESSALLARSVELARAAADAAPA---------------EVWVAASVGPYG 119
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
VL DGSEY G Y +T +L +HRP +EAL AG D LALET+P EA AL+
Sbjct: 120 AVLADGSEYRGRY--GLTVRELERFHRPRIEALAAAGPDVLALETVPDTDEAKALLAAAA 177
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+ G WLS++ D T G+ ++ A L A +Q+ A GVNC P + V
Sbjct: 178 DC-GVPVWLSYTADGD-RTRAGQPLADAFA--LAAEHEQVIATGVNCCAPRDAAPAVA-R 232
Query: 249 KQSHPTVQTIVYPNKG 264
S +VYPN G
Sbjct: 233 AASVTGRPVVVYPNSG 248
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 96/192 (50%), Gaps = 9/192 (4%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
AAS+GPYG VL DGSEY G Y +T +L +HRP +EAL AG D LALET+P EA
Sbjct: 112 AASVGPYGAVLADGSEYRGRY--GLTVRELERFHRPRIEALAAAGPDVLALETVPDTDEA 169
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
AL+ + G WLS++ D T G+ ++ A L A +Q+ A GVNC P
Sbjct: 170 KALLAAAADC-GVPVWLSYTADGD-RTRAGQPLADAFA--LAAEHEQVIATGVNCCAPRD 225
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556
+ V S +VYPN G WD W Y P W+ G +IGG
Sbjct: 226 AAPAVA-RAASVTGRPVVVYPNSGEDWDPAAHTWRGPV-RYDPAQ-APAWVTAGARLIGG 282
Query: 557 CCEVTSYEIQQM 568
CC V I ++
Sbjct: 283 CCRVGPATIAEL 294
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 313 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
+ AAS+GPYG VL DGSEY G Y +T +L +HRP +EAL AG D LAL
Sbjct: 108 EVWVAASVGPYGAVLADGSEYRGRY--GLTVRELERFHRPRIEALAAAGPDVLAL 160
>gi|325187970|emb|CCA22513.1| unnamed protein product [Albugo laibachii Nc14]
Length = 354
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 134/276 (48%), Gaps = 31/276 (11%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTE----PEACVETHRDFIRAGADIIQS 61
V +LDG ++++ + + LWS+ L + +A V H ++ R+GA+I +
Sbjct: 26 NVLILDGGLSTEIENYDGIRLSEGCLWSARLLLPQNAHLQQAIVHAHSNYFRSGAEIATT 85
Query: 62 SCYQANVDNLTK-----LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG 116
S YQ ++D L + +G ++ L +L+KS++L + A+D + + D N NK
Sbjct: 86 SSYQVSLDGLLREFKGDIGTAQPLLLPMLNKSIELASIARDTQYRIQD-NSNKPM----- 139
Query: 117 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL-VRAGVDYLALETIP 175
AASIG +G L DGSEY G Y ++ L++WH AL + D L ETIP
Sbjct: 140 ---IAASIGCFGAALADGSEYRGQY--TLNVDQLVSWHLDRFRALALHPQTDILIFETIP 194
Query: 176 AEKEALALVKLLREFPGQ------KAWLSFSCKDDTHTSHGELISSAVTSCL-LANPDQI 228
E A+V+LL K ++ +C++++ + GE I + + + +
Sbjct: 195 CIIEVEAIVRLLNSHSEMIQKRQLKVIIAVACRNESQLNSGEPIFKLTETIQSIRCQENL 254
Query: 229 QAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
IG+NC P V +L++ S IVYPN G
Sbjct: 255 IGIGINCTNPKFVESLLKSFSCS---CDKIVYPNSG 287
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 142/326 (43%), Gaps = 30/326 (9%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTE----PEACVETHRDFIRGHIETAASI 320
V +LDG ++++ + + LWS+ L + +A V H ++ R E A +
Sbjct: 27 VLILDGGLSTEIENYDGIRLSEGCLWSARLLLPQNAHLQQAIVHAHSNYFRSGAEIATT- 85
Query: 321 GPYGTVLRDG--SEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAA 378
Y L DG E+ G + L+ ++E A + S AA
Sbjct: 86 SSYQVSL-DGLLREFKGDI--GTAQPLLLPMLNKSIELASIARDTQYRIQDNSNKPMIAA 142
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL-VRAGVDYLALETIPAEKEAL 437
SIG +G L DGSEY G Y ++ L++WH AL + D L ETIP E
Sbjct: 143 SIGCFGAALADGSEYRGQY--TLNVDQLVSWHLDRFRALALHPQTDILIFETIPCIIEVE 200
Query: 438 ALVKLLREFPGQ------KAWLSFSCKDDTHTSHGELISSAVTSCL-LANPDQIQAIGVN 490
A+V+LL K ++ +C++++ + GE I + + + + IG+N
Sbjct: 201 AIVRLLNSHSEMIQKRQLKVIIAVACRNESQLNSGEPIFKLTETIQSIRCQENLIGIGIN 260
Query: 491 CVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWL---DTEDEYSILH----YV 543
C P V +L++ S IVYPN G W++ +W T+ + L Y+
Sbjct: 261 CTNPKFVESLLKSFSCS---CDKIVYPNSGEEWNANAKQWERPNGTQSATACLTDWETYL 317
Query: 544 PQWLEEGVNIIGGCCEVTSYEIQQMR 569
P+W + G I GGCC + +I +R
Sbjct: 318 PRWYDAGARIFGGCCRTSPKDIAAIR 343
>gi|254386251|ref|ZP_05001561.1| homocysteine methyltransferase [Streptomyces sp. Mg1]
gi|194345106|gb|EDX26072.1| homocysteine methyltransferase [Streptomyces sp. Mg1]
Length = 291
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 98/196 (50%), Gaps = 17/196 (8%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
AAS+GPYG VL DGSEY G Y + E L A+HRP AL+ AG D LALETIP EA
Sbjct: 103 AASVGPYGAVLADGSEYRGRYGLGVRE--LAAFHRPRALALLAAGPDVLALETIPDTVEA 160
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
AL+ +L E G AWLS++ T G+ ++ A + Q+ A+GVNC P
Sbjct: 161 EALLGILAET-GAPAWLSYTVAGG-RTRAGQPLAEAFALAAAS--PQVIAVGVNCCDPED 216
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVP----QWLEEGVN 552
V + + + YPN G VW++ W ++ H P W E G
Sbjct: 217 VLPALEAAAGVT-GMPLLAYPNDGSVWEAATRTW------HAPGHPAPWPAEAWQEAGAR 269
Query: 553 IIGGCCEVTSYEIQQM 568
+IGGCC + I +
Sbjct: 270 LIGGCCRIGPAGIAAL 285
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 122/260 (46%), Gaps = 36/260 (13%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ LLDG ++Q++ D+ G LW+ L P H + AGA+++ ++ YQ
Sbjct: 15 RTVLLDGGLSNQLADQGC-DLSGD-LWTGRVLAERPGQVARAHAAYAGAGAEVLITASYQ 72
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH-IETAASI 124
LG + +L +SV+L A + GH + AAS+
Sbjct: 73 --------LGSAAPA--ELFARSVRLAAGAAET----------------AGHEVWVAASV 106
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG VL DGSEY G Y + E L A+HRP AL+ AG D LALETIP EA AL+
Sbjct: 107 GPYGAVLADGSEYRGRYGLGVRE--LAAFHRPRALALLAAGPDVLALETIPDTVEAEALL 164
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
+L E G AWLS++ T G+ ++ A + Q+ A+GVNC P V
Sbjct: 165 GILAET-GAPAWLSYTVAGG-RTRAGQPLAEAFALAAAS--PQVIAVGVNCCDPEDVLPA 220
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
+ + + YPN G
Sbjct: 221 LEAAAGVT-GMPLLAYPNDG 239
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 312 GH-IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
GH + AAS+GPYG VL DGSEY G Y + E L A+HRP AL+ AG D LAL
Sbjct: 97 GHEVWVAASVGPYGAVLADGSEYRGRYGLGVRE--LAAFHRPRALALLAAGPDVLAL 151
>gi|357588573|ref|ZP_09127239.1| homocysteine methyltransferase [Corynebacterium nuruki S6-4]
Length = 334
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 143/323 (44%), Gaps = 36/323 (11%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG +++ D+ G LWS+ L P+ H DF E A + TV
Sbjct: 20 ILDGGLGTRLEDRG-NDITGA-LWSAQILKDNPDEVRAAHADFFAAGAEVATACSYEVTV 77
Query: 327 LRDGSEYSG-HYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGT 385
DG +G D+++E++L+ +V A AAS+GPYG
Sbjct: 78 --DGLVATGMSRSDAVSESELLLRRAVSVAREAA----SAAAEAAGAPRWVAASVGPYGA 131
Query: 386 VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE 445
+G+EY G Y +T +L WHR + L +G D L ET+P+ +E AL RE
Sbjct: 132 GPGEGTEYDGAY--GLTVDELADWHRDRIGILADSGADVLLAETVPSVREIEALA---RE 186
Query: 446 F--PGQKAWLSFSC--------KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP- 494
F G A LS + D S G +S + ++A + +GVNCV
Sbjct: 187 FTAAGVDALLSVTVLPRTPGTLADGVTLSDGTELSE--VARIVAETPAFRTVGVNCVSAD 244
Query: 495 ---SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDE------YSILHYVPQ 545
+ V L + ++ + VYPN G +WD V+ WL E S+L VP
Sbjct: 245 AALAGVRALGEGLAEAGRPLPLSVYPNSGELWDHVNRCWLPRTAESAGGATTSLLDAVPD 304
Query: 546 WLEEGVNIIGGCCEVTSYEIQQM 568
+L+ GV +IGGCC VT EI +
Sbjct: 305 FLDAGVRLIGGCCRVTPREITAI 327
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 117/274 (42%), Gaps = 38/274 (13%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +++ D+ G LWS+ L P+ H DF AGA++ + Y+ V
Sbjct: 20 ILDGGLGTRLEDRG-NDITGA-LWSAQILKDNPDEVRAAHADFFAAGAEVATACSYEVTV 77
Query: 69 DNLTKLGYSEQEALD----LLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
D L G S +A+ LL ++V + A + AAS+
Sbjct: 78 DGLVATGMSRSDAVSESELLLRRAVSVAREAASAAAEA-----------AGAPRWVAASV 126
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG +G+EY G Y +T +L WHR + L +G D L ET+P+ +E AL
Sbjct: 127 GPYGAGPGEGTEYDGAY--GLTVDELADWHRDRIGILADSGADVLLAETVPSVREIEALA 184
Query: 185 KLLREF--PGQKAWLSFSC--------KDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 234
REF G A LS + D S G +S + ++A + +GVN
Sbjct: 185 ---REFTAAGVDALLSVTVLPRTPGTLADGVTLSDGTELSE--VARIVAETPAFRTVGVN 239
Query: 235 CVRP----SHVSTLVRCIKQSHPTVQTIVYPNKG 264
CV + V L + ++ + VYPN G
Sbjct: 240 CVSADAALAGVRALGEGLAEAGRPLPLSVYPNSG 273
>gi|428169266|gb|EKX38202.1| hypothetical protein GUITHDRAFT_115747 [Guillardia theta CCMP2712]
Length = 261
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 122/260 (46%), Gaps = 28/260 (10%)
Query: 330 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD------YLALIKPS-ISSQTAASIGP 382
G++ SGH + D A + A AG D Y A + + AAS+G
Sbjct: 5 GADLSGHLWSARLLRDDPALIKRTHAAFYMAGSDLATSASYQATVAGGRMKPFAAASVGC 64
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
YG L DGSEY+G Y + + ++ A+H ++ LV+ D LA ETIP E A++ +
Sbjct: 65 YGASLADGSEYTGIY--DIGKEEVKAFHLERLKLLVKEEPDVLAFETIPNLMEVEAILDV 122
Query: 443 LR-------EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP--DQIQAIGVNCVR 493
L E P AW+S C+ D S GE + V +P Q+ A+GVNC+
Sbjct: 123 LNHQDVSSSEIP---AWISVCCRSDECLSSGEPVDDFVRLVAARSPATRQLVAVGVNCLH 179
Query: 494 PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWL----DTEDEYSILHYVPQWLEE 549
P +V ++ +K + +VY NKG WD+ +W+ +DEY W
Sbjct: 180 PRYVEKILERMKVGS-KLALVVYANKGEEWDAEEKRWMPGTATEDDEYC--RMAEMWRSM 236
Query: 550 GVNIIGGCCEVTSYEIQQMR 569
G N+IGGCC + I+ +R
Sbjct: 237 GANMIGGCCRTSVDTIRMLR 256
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 107/249 (42%), Gaps = 59/249 (23%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
D+ GH LWS+ L +P TH F AG+D+ S+ YQA V
Sbjct: 7 DLSGH-LWSARLLRDDPALIKRTHAAFYMAGSDLATSASYQATVAG-------------- 51
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDS 144
K F AAS+G YG L DGSEY+G Y
Sbjct: 52 ---------------------GRMKPF--------AAASVGCYGASLADGSEYTGIY--D 80
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR-------EFPGQKAWL 197
+ + ++ A+H ++ LV+ D LA ETIP E A++ +L E P AW+
Sbjct: 81 IGKEEVKAFHLERLKLLVKEEPDVLAFETIPNLMEVEAILDVLNHQDVSSSEIP---AWI 137
Query: 198 SFSCKDDTHTSHGELISSAVTSCLLANP--DQIQAIGVNCVRPSHVSTLVRCIKQSHPTV 255
S C+ D S GE + V +P Q+ A+GVNC+ P +V ++ +K +
Sbjct: 138 SVCCRSDECLSSGEPVDDFVRLVAARSPATRQLVAVGVNCLHPRYVEKILERMKVGS-KL 196
Query: 256 QTIVYPNKG 264
+VY NKG
Sbjct: 197 ALVVYANKG 205
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 22/104 (21%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFI-------------------RGHIETAASIGPY 323
D+ GH LWS+ L +P TH F R AAS+G Y
Sbjct: 7 DLSGH-LWSARLLRDDPALIKRTHAAFYMAGSDLATSASYQATVAGGRMKPFAAASVGCY 65
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
G L DGSEY+G Y + + ++ A+H ++ LV+ D LA
Sbjct: 66 GASLADGSEYTGIY--DIGKEEVKAFHLERLKLLVKEEPDVLAF 107
>gi|338995681|ref|ZP_08635393.1| homocysteine methyltransferase, partial [Halomonas sp. TD01]
gi|338766423|gb|EGP21343.1| homocysteine methyltransferase [Halomonas sp. TD01]
Length = 182
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 95/171 (55%), Gaps = 9/171 (5%)
Query: 404 ADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHT 463
A L+A+HR E L+ AG D LA ET+P+ EALA+ LL E PG +AW++FS KD H
Sbjct: 1 AGLVAFHRERFELLLAAGADLLAAETLPSLDEALAITDLLAEHPGAQAWITFSAKDGKHI 60
Query: 464 SHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVW 523
S G I + LAN + AIGVNC H+ +L++ I++ + +VYPN G V+
Sbjct: 61 SDGTPIEECAAA--LANCPGVAAIGVNCTALPHIESLIQAIRR-QCDLPVLVYPNSGEVY 117
Query: 524 DSVHMKWLDTEDEY------SILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
D+V W ++ ++ V QWL G + IGGCC +IQ +
Sbjct: 118 DAVTKTWHPATCDHTASGPSALAQGVEQWLAAGASAIGGCCRTAPADIQAL 168
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Query: 148 ADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHT 207
A L+A+HR E L+ AG D LA ET+P+ EALA+ LL E PG +AW++FS KD H
Sbjct: 1 AGLVAFHRERFELLLAAGADLLAAETLPSLDEALAITDLLAEHPGAQAWITFSAKDGKHI 60
Query: 208 SHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
S G I + LAN + AIGVNC H+ +L++ I++ + +VYPN G
Sbjct: 61 SDGTPIEECAAA--LANCPGVAAIGVNCTALPHIESLIQAIRR-QCDLPVLVYPNSG 114
>gi|221487139|gb|EEE25385.1| homocysteine S-methyltransferase-1, putative [Toxoplasma gondii
GT1]
Length = 434
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 54/308 (17%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG + + R + G PLW+S + + P+ H DF AGAD+ ++ YQA
Sbjct: 10 ILLLDGGLGTHL-RALGAEFHGDPLWASKAVLSAPDLVRRAHFDFFDAGADVAITATYQA 68
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAK---------------DKENQTPDINL---- 107
++ ++G S A D + ++ L A+ ++EN+ P+++
Sbjct: 69 SLTGFAQIGLSPSTAHDAVALAINLAAEARRLAEEGDVSARSFGEERENEGPEVDALRNA 128
Query: 108 --NKTFNLLTGHIETAA------------SIGPYGTVLRDGSEYSGHYVDSMTEADLIAW 153
+ T ++ G+ A S G YG L G+EY G+Y ++E +
Sbjct: 129 ATSDTDSVQQGNARDADRRYRRRNRKILVSNGSYGASLGGGAEYRGNY--GVSEKTFHDY 186
Query: 154 HRPNVEALVRAG--VDYLALETIPAEKEALALVKLLREFPG--QKAWLSFSCKDDTHTSH 209
HR ++A + VD + ET+P EA A+V LLREFP K WL+F+CK T +
Sbjct: 187 HRWRLQAALEQEHLVDGVVFETLPEHAEAKAIVSLLREFPSLRGKTWLAFTCKSPTELAG 246
Query: 210 GELISSAVTSCLLAN-PDQ-IQAIGVNCV----------RPSHVSTLVRCIKQSHP--TV 255
GE S V L + DQ I IGVNC P +L ++++ ++
Sbjct: 247 GEDFRSVVADVLKQDGADQYISGIGVNCAPISTTVPLLCSPPLRDSLAASLEKTRDPWSL 306
Query: 256 QTIVYPNK 263
Q + YPN
Sbjct: 307 QVVCYPNN 314
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 130/333 (39%), Gaps = 62/333 (18%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETA------- 317
+ LLDG + + R + G PLW+S + + P+ H DF + A
Sbjct: 10 ILLLDGGLGTHL-RALGAEFHGDPLWASKAVLSAPDLVRRAHFDFFDAGADVAITATYQA 68
Query: 318 -----ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHR---------------PNVEAL 357
A IG + D + ++ EA +A P V+AL
Sbjct: 69 SLTGFAQIGLSPSTAHDAVALA---INLAAEARRLAEEGDVSARSFGEERENEGPEVDAL 125
Query: 358 VRAGVDYLALIKPS-----------ISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADL 406
A ++ + + S G YG L G+EY G+Y ++E
Sbjct: 126 RNAATSDTDSVQQGNARDADRRYRRRNRKILVSNGSYGASLGGGAEYRGNY--GVSEKTF 183
Query: 407 IAWHRPNVEALVRAG--VDYLALETIPAEKEALALVKLLREFPG--QKAWLSFSCKDDTH 462
+HR ++A + VD + ET+P EA A+V LLREFP K WL+F+CK T
Sbjct: 184 HDYHRWRLQAALEQEHLVDGVVFETLPEHAEAKAIVSLLREFPSLRGKTWLAFTCKSPTE 243
Query: 463 TSHGELISSAVTSCLLAN-PDQ-IQAIGVNCV----------RPSHVSTLVRCIKQSHP- 509
+ GE S V L + DQ I IGVNC P +L ++++
Sbjct: 244 LAGGEDFRSVVADVLKQDGADQYISGIGVNCAPISTTVPLLCSPPLRDSLAASLEKTRDP 303
Query: 510 -TVQTIVYPNKGGVWDSVHMKWLDTEDEYSILH 541
++Q + YPN ++ D E + H
Sbjct: 304 WSLQVVCYPNNEAARNTKDCSSKDFESQEESCH 336
>gi|237831423|ref|XP_002365009.1| homocysteine S-methyltransferase-1 [Toxoplasma gondii ME49]
gi|211962673|gb|EEA97868.1| homocysteine S-methyltransferase-1 [Toxoplasma gondii ME49]
gi|221506825|gb|EEE32442.1| homocysteine S-methyltransferase-1, putative [Toxoplasma gondii
VEG]
Length = 434
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 54/308 (17%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG + + R + G PLW+S + + P+ H DF AGAD+ ++ YQA
Sbjct: 10 ILLLDGGLGTHL-RALGAEFHGDPLWASKAVLSAPDLVRRAHFDFFDAGADVAITATYQA 68
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAK---------------DKENQTPDINL---- 107
++ ++G S A D + ++ L A+ ++EN+ P+++
Sbjct: 69 SLTGFAQIGLSPSTAHDAVALAINLAAEARRLAEEGDVSARSFGEERENEGPEVDALRNA 128
Query: 108 --NKTFNLLTGHIETAA------------SIGPYGTVLRDGSEYSGHYVDSMTEADLIAW 153
+ T ++ G+ A S G YG L G+EY G+Y ++E +
Sbjct: 129 ATSDTDSVQQGNARDADRRYRRRNRKILVSNGSYGASLGGGAEYRGNY--GVSEKTFHDY 186
Query: 154 HRPNVEALVRAG--VDYLALETIPAEKEALALVKLLREFPG--QKAWLSFSCKDDTHTSH 209
HR ++A + VD + ET+P EA A+V LLREFP K WL+F+CK T +
Sbjct: 187 HRWRLQAALEQEHLVDGVVFETLPEHAEAKAIVSLLREFPSLRGKTWLAFTCKSPTELAG 246
Query: 210 GELISSAVTSCLLAN-PDQ-IQAIGVNCV----------RPSHVSTLVRCIKQSHP--TV 255
GE S V L + DQ I IGVNC P +L ++++ ++
Sbjct: 247 GEDFRSVVADVLKQDGADQYISGIGVNCAPISTTVPLLCSPPLRDSLAASLEKTRDPWSL 306
Query: 256 QTIVYPNK 263
Q + YPN
Sbjct: 307 QVVCYPNN 314
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 130/333 (39%), Gaps = 62/333 (18%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETA------- 317
+ LLDG + + R + G PLW+S + + P+ H DF + A
Sbjct: 10 ILLLDGGLGTHL-RALGAEFHGDPLWASKAVLSAPDLVRRAHFDFFDAGADVAITATYQA 68
Query: 318 -----ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHR---------------PNVEAL 357
A IG + D + ++ EA +A P V+AL
Sbjct: 69 SLTGFAQIGLSPSTAHDAVALA---INLAAEARRLAEEGDVSARSFGEERENEGPEVDAL 125
Query: 358 VRAGVDYLALIKPS-----------ISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADL 406
A ++ + + S G YG L G+EY G+Y ++E
Sbjct: 126 RNAATSDTDSVQQGNARDADRRYRRRNRKILVSNGSYGASLGGGAEYRGNY--GVSEKTF 183
Query: 407 IAWHRPNVEALVRAG--VDYLALETIPAEKEALALVKLLREFPG--QKAWLSFSCKDDTH 462
+HR ++A + VD + ET+P EA A+V LLREFP K WL+F+CK T
Sbjct: 184 HDYHRWRLQAALEQEHLVDGVVFETLPEHAEAKAIVSLLREFPSLRGKTWLAFTCKSPTE 243
Query: 463 TSHGELISSAVTSCLLAN-PDQ-IQAIGVNCV----------RPSHVSTLVRCIKQSHP- 509
+ GE S V L + DQ I IGVNC P +L ++++
Sbjct: 244 LAGGEDFRSVVADVLKQDGADQYISGIGVNCAPISTTVPLLCSPPLRDSLAASLEKTRDP 303
Query: 510 -TVQTIVYPNKGGVWDSVHMKWLDTEDEYSILH 541
++Q + YPN ++ D E + H
Sbjct: 304 WSLQVVCYPNNEAARNTKDCSSKDFESQEESCH 336
>gi|294632091|ref|ZP_06710651.1| homocysteine S-methyltransferase [Streptomyces sp. e14]
gi|292835424|gb|EFF93773.1| homocysteine S-methyltransferase [Streptomyces sp. e14]
Length = 309
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 131/315 (41%), Gaps = 27/315 (8%)
Query: 264 GVKLLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
G +LDG ++Q+ + H + D LWS+ L PEA E H + + +
Sbjct: 16 GTLVLDGGLSNQLETAGHDLGDA----LWSARLLAERPEAVTEAHLAYFTAGADVVITAS 71
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA--AS 379
Y G + AW P G Y + +
Sbjct: 72 -YQATFEGFRPARGSAGSGRPRSSRPAWTSP--------GTRYGGHAPRASHGRCGWPRR 122
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
GPYG +L DGSEY G Y +T +L +HRP +E L A D LALET+P EA AL
Sbjct: 123 PGPYGAMLADGSEYRGRY--GLTAGELERFHRPRLEVLAAARPDVLALETVPDADEARAL 180
Query: 440 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
++ +R G AWLS++ T G+ + A A D++ A+GVNC P
Sbjct: 181 LRAVRGL-GVPAWLSYTVA-GPRTRAGQPLEEAFAPAAAA--DEVIAVGVNCCDPEDADA 236
Query: 500 LVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
V + +VYPN G WD+ W ++ V +W G +IGGCC
Sbjct: 237 AVATAARVT-GKPVVVYPNSGEAWDAGARAWSGRPSFHA--DRVTRWRAFGARLIGGCCR 293
Query: 560 VTSYEIQQM-RIMID 573
V I ++ R + D
Sbjct: 294 VGPETITEIARTLSD 308
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 115/266 (43%), Gaps = 38/266 (14%)
Query: 9 LLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG ++Q+ + H + D LWS+ L PEA E H + AGAD++ ++ YQA
Sbjct: 19 VLDGGLSNQLETAGHDLGDA----LWSARLLAERPEAVTEAHLAYFTAGADVVITASYQA 74
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAA---- 122
+ SA ++ GH A+
Sbjct: 75 TFEGFRPA-----------------RGSAGSGRPRSSRPAWTSPGTRYGGHAPRASHGRC 117
Query: 123 ----SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 178
GPYG +L DGSEY G Y +T +L +HRP +E L A D LALET+P
Sbjct: 118 GWPRRPGPYGAMLADGSEYRGRY--GLTAGELERFHRPRLEVLAAARPDVLALETVPDAD 175
Query: 179 EALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 238
EA AL++ +R G AWLS++ T G+ + A A D++ A+GVNC P
Sbjct: 176 EARALLRAVRGL-GVPAWLSYTVA-GPRTRAGQPLEEAFAPAAAA--DEVIAVGVNCCDP 231
Query: 239 SHVSTLVRCIKQSHPTVQTIVYPNKG 264
V + +VYPN G
Sbjct: 232 EDADAAVATAARVT-GKPVVVYPNSG 256
>gi|378823329|ref|ZP_09845984.1| homocysteine S-methyltransferase [Sutterella parvirubra YIT 11816]
gi|378597858|gb|EHY31091.1| homocysteine S-methyltransferase [Sutterella parvirubra YIT 11816]
Length = 318
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 111/236 (47%), Gaps = 22/236 (9%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQ 90
LW++ L EPE H + RAGAD+ + YQA L K G + A D++ KSV
Sbjct: 48 LWTAKVLVNEPEIVERVHEAYARAGADVAITCSYQATEAGLAKKGLDSEAAFDVIAKSVT 107
Query: 91 LMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADL 150
L + + I A S+GPYG L DGSEY G Y +T+A+
Sbjct: 108 LAREGCRRGGREDAI--------------VAGSVGPYGAYLADGSEYRGDY--RLTDAEF 151
Query: 151 IAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCK--DDTHTS 208
A+H ++AL AG D ALET P E ALV++ G W++ + K D T
Sbjct: 152 EAFHALRMDALKAAGCDLYALETQPQFAEIRALVRMTAAR-GMTCWVTMTHKAGDPTRLP 210
Query: 209 HGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
G +S + L D ++A+G+NCV + + + + + + I+YPN G
Sbjct: 211 DGTPLSE--VAAWLDGEDCVEALGLNCVPKATAAQALDALTGAT-SKPVILYPNSG 263
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 141/318 (44%), Gaps = 27/318 (8%)
Query: 257 TIVYPNKGVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHI 314
T + K ++DG+ ++ + +KD LW++ L EPE H + R
Sbjct: 18 TALLAKKESLIIDGAMSTALEALGADLKD----DLWTAKVLVNEPEIVERVHEAYARAGA 73
Query: 315 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISS 374
+ A + T + + +DS D+IA R G A++
Sbjct: 74 DVAITCSYQATE----AGLAKKGLDSEAAFDVIAKSVTLAREGCRRGGREDAIV------ 123
Query: 375 QTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 434
A S+GPYG L DGSEY G Y +T+A+ A+H ++AL AG D ALET P
Sbjct: 124 --AGSVGPYGAYLADGSEYRGDY--RLTDAEFEAFHALRMDALKAAGCDLYALETQPQFA 179
Query: 435 EALALVKLLREFPGQKAWLSFSCK--DDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 492
E ALV++ G W++ + K D T G +S + L D ++A+G+NCV
Sbjct: 180 EIRALVRMTAAR-GMTCWVTMTHKAGDPTRLPDGTPLSE--VAAWLDGEDCVEALGLNCV 236
Query: 493 RPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGV 551
+ + + + + + I+YPN G +D+ W + + V +W +GV
Sbjct: 237 PKATAAQALDALTGAT-SKPVILYPNSGETYDAATKTWSKADPHAHDWDADVVRWKGQGV 295
Query: 552 NIIGGCCEVTSYEIQQMR 569
+GGCC +++ MR
Sbjct: 296 RCLGGCCRTLPEDVRVMR 313
>gi|356504951|ref|XP_003521256.1| PREDICTED: LOW QUALITY PROTEIN: selenocysteine
methyltransferase-like [Glycine max]
Length = 327
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 127/267 (47%), Gaps = 27/267 (10%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG +++ RH D PLWS+ L + P + H D++ GADII ++ YQA +
Sbjct: 17 VIDGGLATELERH--GDDLNDPLWSAKCLFSSPHLIRQVHLDYLENGADIIITASYQATI 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQT----------PDINLNKTFNLLTGHI 118
GYS++E+ LL +S ++ A++ ++ D + K +L
Sbjct: 75 QGFKAKGYSDEESEALLKRSAEIAFEAREVYDKNCAGCCSGDGEDDGRILKQRPIL---- 130
Query: 119 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 178
AA +G YG L DGS YSG Y D++T R V+ L + D LA ET+ +
Sbjct: 131 -VAALVGSYGAYLADGSGYSGDYGDAIT-----VEIRRRVQILADSSADLLAFETVSNKL 184
Query: 179 EALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 237
EA A +LL E + AW SF+ S L+ + + +++ A+G+ C
Sbjct: 185 EAEAFAQLLEEEDIKIPAWFSFNSXGVNVVSGDSLMECG---SIAESGNKVVAVGIYCTP 241
Query: 238 PSHVSTLVRCIKQSHPTVQTIVYPNKG 264
P + L+ +K+ T ++YPN G
Sbjct: 242 PRFIHGLIVLLKRV-TTKPIVIYPNSG 267
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 149/331 (45%), Gaps = 35/331 (10%)
Query: 255 VQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHI 314
+ ++ G ++DG +++ RH D PLWS+ L + P + H D++
Sbjct: 5 ITDLLRETGGSAVIDGGLATELERH--GDDLNDPLWSAKCLFSSPHLIRQVHLDYLENGA 62
Query: 315 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADL-----IAWHRPNVEALVRAGV------- 362
+ + T+ G + G Y D +EA L IA+ V AG
Sbjct: 63 DIIITASYQATI--QGFKAKG-YSDEESEALLKRSAEIAFEAREVYDKNCAGCCSGDGED 119
Query: 363 DYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGV 422
D L + I AA +G YG L DGS YSG Y D++T R V+ L +
Sbjct: 120 DGRILKQRPI--LVAALVGSYGAYLADGSGYSGDYGDAIT-----VEIRRRVQILADSSA 172
Query: 423 DYLALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANP 481
D LA ET+ + EA A +LL E + AW SF+ S L+ + +
Sbjct: 173 DLLAFETVSNKLEAEAFAQLLEEEDIKIPAWFSFNSXGVNVVSGDSLMECG---SIAESG 229
Query: 482 DQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLD----TEDEY 537
+++ A+G+ C P + L+ +K+ T ++YPN G +D+ +W+ T++++
Sbjct: 230 NKVVAVGIYCTPPRFIHGLIVLLKRV-TTKPIVIYPNSGETYDADLKEWVQNTGVTDEDF 288
Query: 538 SILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+ YV +W E G + +GGCC T I+++
Sbjct: 289 --ISYVNKWXELGASCVGGCCRTTPDTIRKI 317
>gi|154346672|ref|XP_001569273.1| putative homocysteine S-methyltransferase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066615|emb|CAM44414.1| putative homocysteine S-methyltransferase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 320
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 101/198 (51%), Gaps = 15/198 (7%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S+GPYG L DGSEY G YV S E +HR + AL+RAGVD LA+ET + E
Sbjct: 115 AGSVGPYGAYLADGSEYRGDYVRSAEE--FKEFHRARIAALLRAGVDVLAIETQASAAEV 172
Query: 437 LALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSC----LLANPDQIQAIGVNC 491
A+V LL+ E P +AW+SF+ + TS + IS T L Q+ A+GVNC
Sbjct: 173 HAIVALLQEEHPNCRAWVSFT---TSRTSPVKAISDDTTWAEIIPFLEMSPQVVAVGVNC 229
Query: 492 VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW----LDTEDEYSILHYVPQWL 547
+ + S ++ + + T+ +VY N G ++ W + S+ P+W
Sbjct: 230 IPMAEASAVLAHL-HTLTTMPLVVYTNSGESYNPATKTWHPIAMADGTTLSLAALAPEWA 288
Query: 548 EEGVNIIGGCCEVTSYEI 565
+G IIGGCC +I
Sbjct: 289 SQGARIIGGCCRTRPSDI 306
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 133/267 (49%), Gaps = 29/267 (10%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG +++ +D PLWS L P+ + +++AGA + ++ YQ
Sbjct: 11 VVMLDGGLGTELEARGCNLLD--PLWSGEVLLKSPQKIQDVELAYLQAGARCLITASYQI 68
Query: 67 NVDNLTK-LGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGHIETAA 122
+L + +E+ A+ ++ +SV++ ++ KEN + + A
Sbjct: 69 TPKSLMEHRLLTEEAAVAVIEESVRIAQVVRERYVKENPQAE------------PVFVAG 116
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
S+GPYG L DGSEY G YV S E +HR + AL+RAGVD LA+ET + E A
Sbjct: 117 SVGPYGAYLADGSEYRGDYVRSAEE--FKEFHRARIAALLRAGVDVLAIETQASAAEVHA 174
Query: 183 LVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSC----LLANPDQIQAIGVNCVR 237
+V LL+ E P +AW+SF+ + TS + IS T L Q+ A+GVNC+
Sbjct: 175 IVALLQEEHPNCRAWVSFT---TSRTSPVKAISDDTTWAEIIPFLEMSPQVVAVGVNCIP 231
Query: 238 PSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+ S ++ + + T+ +VY N G
Sbjct: 232 MAEASAVLAHL-HTLTTMPLVVYTNSG 257
>gi|241949431|ref|XP_002417438.1| S-methylmethionine:homocysteine methyltransferase, putative;
homocysteine S-methyltransferase, putative [Candida
dubliniensis CD36]
gi|223640776|emb|CAX45091.1| S-methylmethionine:homocysteine methyltransferase, putative
[Candida dubliniensis CD36]
Length = 311
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 116/236 (49%), Gaps = 20/236 (8%)
Query: 30 PLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTK-LGYSEQEALDLLHKS 88
PLWS L PE + H D+I AGAD+I +S YQ + +L K +GY +A+ L + +
Sbjct: 39 PLWSGQVLIKNPELVEQVHLDYINAGADMIITSTYQTSYASLHKYIGYDMDQAVTLWNSA 98
Query: 89 VQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEA 148
+ + SA K + I A SIGPY T+L +GSEY+G Y +++
Sbjct: 99 LDVAKSAVKKSGRDDVI--------------IAGSIGPYATLLANGSEYNGDY-QGVSDQ 143
Query: 149 DLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTS 208
+LI +H P E + VD + +ETIP+ +E ++ L +++ ++ ++S + + + S
Sbjct: 144 ELIEYHTPLFEFYNNSDVDIICIETIPSFQELKVIIGLTKKYTSKEFFISINPQTGSALS 203
Query: 209 HGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
G ++ N + A+G+NC +V + + +YPN G
Sbjct: 204 DGTSLTEVAQLFAEINDPRFVAVGINCTSYENVDQISTYLTN----FPIFIYPNLG 255
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 136/292 (46%), Gaps = 24/292 (8%)
Query: 288 PLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLI 347
PLWS L PE + H D+I + + Y T +Y G+ +D +
Sbjct: 39 PLWSGQVLIKNPELVEQVHLDYINAGADMIIT-STYQTSYASLHKYIGYDMDQA----VT 93
Query: 348 AWHRP---NVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEA 404
W+ A+ ++G D + + A SIGPY T+L +GSEY+G Y +++
Sbjct: 94 LWNSALDVAKSAVKKSGRDDVII---------AGSIGPYATLLANGSEYNGDY-QGVSDQ 143
Query: 405 DLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTS 464
+LI +H P E + VD + +ETIP+ +E ++ L +++ ++ ++S + + + S
Sbjct: 144 ELIEYHTPLFEFYNNSDVDIICIETIPSFQELKVIIGLTKKYTSKEFFISINPQTGSALS 203
Query: 465 HGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWD 524
G ++ N + A+G+NC +V + + +YPN G V+D
Sbjct: 204 DGTSLTEVAQLFAEINDPRFVAVGINCTSYENVDQISTYLTN----FPIFIYPNLGFVYD 259
Query: 525 SVHMKWLDTE-DEYSILHYVPQWLE-EGVNIIGGCCEVTSYEIQQMRIMIDE 574
+ K++ E + + + +WL V IGGCC T EIQQ+ +I +
Sbjct: 260 TTVHKFVSKMLQESAWANSIAKWLNLPNVKAIGGCCSTTPAEIQQVAQLIKQ 311
>gi|385815026|ref|YP_005851417.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|325125063|gb|ADY84393.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 187
Score = 106 bits (265), Expect = 3e-20, Method: Composition-based stats.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 18/198 (9%)
Query: 15 TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKL 74
+ ++ R +K + LW++ L E + + H D+ AGA+++ + YQANV T++
Sbjct: 2 SDELERQGVKT--NNKLWTATALINELDKVYQAHWDYFTAGAELVITDTYQANVQVFTQV 59
Query: 75 GYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG-HIETAASIGPYGTVLRD 133
GYSEQEA + +V++ A+D Q TG H A ++G YG L D
Sbjct: 60 GYSEQEAEKFIRDAVKVAKKARDDYEQK------------TGKHNYVAGTVGSYGAYLAD 107
Query: 134 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQ 193
G+EY G Y ++E + +A+H P + ++ D +ALET P E LA++ L+E
Sbjct: 108 GNEYRGDY--ELSELEYLAFHLPRLRQILAEKPDLIALETQPKLDEPLAVLNWLKENASD 165
Query: 194 -KAWLSFSCKDDTHTSHG 210
++SF+ KD TH S G
Sbjct: 166 YPVYVSFTLKDATHISDG 183
Score = 63.2 bits (152), Expect = 4e-07, Method: Composition-based stats.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 18/197 (9%)
Query: 273 TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSE 332
+ ++ R +K + LW++ L E + + H D+ E V+ D +
Sbjct: 2 SDELERQGVKT--NNKLWTATALINELDKVYQAHWDYFTAGAEL---------VITDTYQ 50
Query: 333 YSGHYVDSM--TEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDG 390
+ + +E + + R V+ +A DY K + A ++G YG L DG
Sbjct: 51 ANVQVFTQVGYSEQEAEKFIRDAVKVAKKARDDYEQ--KTGKHNYVAGTVGSYGAYLADG 108
Query: 391 SEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQ- 449
+EY G Y ++E + +A+H P + ++ D +ALET P E LA++ L+E
Sbjct: 109 NEYRGDY--ELSELEYLAFHLPRLRQILAEKPDLIALETQPKLDEPLAVLNWLKENASDY 166
Query: 450 KAWLSFSCKDDTHTSHG 466
++SF+ KD TH S G
Sbjct: 167 PVYVSFTLKDATHISDG 183
>gi|68488439|ref|XP_711903.1| hypothetical protein CaO19.8016 [Candida albicans SC5314]
gi|68488498|ref|XP_711874.1| hypothetical protein CaO19.386 [Candida albicans SC5314]
gi|46433218|gb|EAK92666.1| hypothetical protein CaO19.386 [Candida albicans SC5314]
gi|46433248|gb|EAK92695.1| hypothetical protein CaO19.8016 [Candida albicans SC5314]
Length = 311
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 119/239 (49%), Gaps = 22/239 (9%)
Query: 28 GHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTK-LGYSEQEALDLLH 86
G PLWS L PE + H D+I GAD+I +S YQ + +L K +GY +A+ L +
Sbjct: 37 GSPLWSGQVLIKNPELVEQVHLDYINVGADMIITSTYQTSYASLHKYIGYDMDQAIALWN 96
Query: 87 KSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMT 146
++ + +A K + I A SIGPY T+L +GSEY+G Y +T
Sbjct: 97 SALNVAKNAVKKSGRDDVI--------------IAGSIGPYATLLANGSEYNGDY-QGVT 141
Query: 147 EADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTH 206
+ +LI +H P E + VD + +ETIP+ +E ++ L +++ ++ ++S + + +
Sbjct: 142 DEELIEYHTPLFEFYENSDVDIICIETIPSFQELKVIIGLAKKYTSKEFFISINPQTGSA 201
Query: 207 TSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
S G LI A + +P + A+G+NC +V + + +YPN G
Sbjct: 202 LSDGTSLIEVAQLFAEINDP-RFVAVGINCTSYENVDQISTYLTD----FPLFIYPNLG 255
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 142/295 (48%), Gaps = 26/295 (8%)
Query: 286 GHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD 345
G PLWS L PE + H D+I + + Y T +Y G+ +D
Sbjct: 37 GSPLWSGQVLIKNPELVEQVHLDYINVGADMIIT-STYQTSYASLHKYIGYDMDQA---- 91
Query: 346 LIAWHRP-NV--EALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMT 402
+ W+ NV A+ ++G D + + A SIGPY T+L +GSEY+G Y +T
Sbjct: 92 IALWNSALNVAKNAVKKSGRDDVII---------AGSIGPYATLLANGSEYNGDY-QGVT 141
Query: 403 EADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTH 462
+ +LI +H P E + VD + +ETIP+ +E ++ L +++ ++ ++S + + +
Sbjct: 142 DEELIEYHTPLFEFYENSDVDIICIETIPSFQELKVIIGLAKKYTSKEFFISINPQTGSA 201
Query: 463 TSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGG 521
S G LI A + +P + A+G+NC +V + + +YPN G
Sbjct: 202 LSDGTSLIEVAQLFAEINDP-RFVAVGINCTSYENVDQISTYLTD----FPLFIYPNLGF 256
Query: 522 VWDSVHMKWLD-TEDEYSILHYVPQWLE-EGVNIIGGCCEVTSYEIQQMRIMIDE 574
V+D+ K++ E + V +WL V IGGCC T EI+Q+ +I++
Sbjct: 257 VYDTTVHKFVSKVLQESTWSKSVAKWLAFPNVKAIGGCCSTTPAEIKQVAQLINQ 311
>gi|452090882|gb|AGF95111.1| homocysteine S-methyltransferase, partial [Prunus persica]
Length = 200
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 26/209 (12%)
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE- 445
L DGSEYSG+Y D++T L +H V L +G D +A ET P +A A +LL E
Sbjct: 2 LADGSEYSGNYGDAVTVETLKDFHTERVPILANSGADLIAFETTPNNIKAKAYAELLEEE 61
Query: 446 ---FPGQKAWLSFSCKDDTHTSHGELIS---SAVTSCLLANPDQIQAIGVNCVRPSHVST 499
P AW SF+ KD + G+ IS S SC Q+ A+G+NC P +
Sbjct: 62 GIDIP---AWFSFTSKDGINVVSGDSISECTSIADSC-----KQVVAVGINCTPPRFIHG 113
Query: 500 LVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWL----DTEDEYSILHYVPQWLEEGVNI 553
LV I++ S P V +YPN G +D + +W+ + ++E++ + + +W E G ++
Sbjct: 114 LVSLIRKVTSKPIV---IYPNSGETYDGLTKQWVQSSGEVDEEFADI-VIGKWREAGASL 169
Query: 554 IGGCCEVTSYEIQQM-RIMIDEFNTKKND 581
GGCC T I+ + R++ ++ ++ N+
Sbjct: 170 FGGCCRTTPNTIRAISRVLSNQKSSAINE 198
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 73/143 (51%), Gaps = 20/143 (13%)
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE- 189
L DGSEYSG+Y D++T L +H V L +G D +A ET P +A A +LL E
Sbjct: 2 LADGSEYSGNYGDAVTVETLKDFHTERVPILANSGADLIAFETTPNNIKAKAYAELLEEE 61
Query: 190 ---FPGQKAWLSFSCKDDTHTSHGELIS---SAVTSCLLANPDQIQAIGVNCVRPSHVST 243
P AW SF+ KD + G+ IS S SC Q+ A+G+NC P +
Sbjct: 62 GIDIP---AWFSFTSKDGINVVSGDSISECTSIADSC-----KQVVAVGINCTPPRFIHG 113
Query: 244 LVRCIKQ--SHPTVQTIVYPNKG 264
LV I++ S P V +YPN G
Sbjct: 114 LVSLIRKVTSKPIV---IYPNSG 133
>gi|403047452|ref|ZP_10902920.1| homocysteine methyltransferase [Staphylococcus sp. OJ82]
gi|402762986|gb|EJX17080.1| homocysteine methyltransferase [Staphylococcus sp. OJ82]
Length = 300
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 289 LWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA 348
LWSS L +P + H+DF + + S Y Y + T+ I
Sbjct: 34 LWSSEVLRHQPIKIKQAHQDFTNAGADIILT-----------STYQASY-QTFTD---IG 78
Query: 349 WHRPNVEALVRAGVDYLALIKPSISSQTA-ASIGPYGTVLRDGSEYSGHYVDSMTEADLI 407
++ L V+ ++ + ++Q S+GPYG L DGSEY+G+YV ++
Sbjct: 79 MQNEEIDDLFTIAVE--QVMDATNNNQVVVGSLGPYGAYLSDGSEYTGNYV--ISREAYF 134
Query: 408 AWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPG----QKAWLSFSCKDDTHT 463
+H + AL+ G++ ET+P +E A+++ + P Q W+S + D +
Sbjct: 135 KFHEQRINALISRGINDFVFETVPNFEEIQAIIENI--IPSYTEEQTFWISVTVDDTGNL 192
Query: 464 SHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTV-QTI-VYPNKGG 521
S G + + I G+NC S V + R + + ++ QTI +YPN G
Sbjct: 193 SDGTEFEKLI-DYIKQKGTIIPIFGINC---SSVKGINRSLDKGLASLSQTIALYPNGGS 248
Query: 522 VWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMR 569
+++ KW + + I+ VP+WL EGV IIGGCC+ T +I++++
Sbjct: 249 HYNADSKKWENDANSDEIIEQVPKWLMEGVQIIGGCCQTTPEDIKKIK 296
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 113/241 (46%), Gaps = 34/241 (14%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSV- 89
LWSS L +P + H+DF AGADII +S YQA+ T +G +E DL +V
Sbjct: 34 LWSSEVLRHQPIKIKQAHQDFTNAGADIILTSTYQASYQTFTDIGMQNEEIDDLFTIAVE 93
Query: 90 QLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD 149
Q+M++ + NQ S+GPYG L DGSEY+G+YV ++
Sbjct: 94 QVMDATNN--NQV-----------------VVGSLGPYGAYLSDGSEYTGNYV--ISREA 132
Query: 150 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPG----QKAWLSFSCKDDT 205
+H + AL+ G++ ET+P +E A+++ + P Q W+S + D
Sbjct: 133 YFKFHEQRINALISRGINDFVFETVPNFEEIQAIIENI--IPSYTEEQTFWISVTVDDTG 190
Query: 206 HTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTV-QTI-VYPNK 263
+ S G + + I G+NC S V + R + + ++ QTI +YPN
Sbjct: 191 NLSDGTEFEKLI-DYIKQKGTIIPIFGINC---SSVKGINRSLDKGLASLSQTIALYPNG 246
Query: 264 G 264
G
Sbjct: 247 G 247
>gi|418029360|ref|ZP_12667904.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1632]
gi|354690208|gb|EHE90161.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1632]
Length = 187
Score = 105 bits (262), Expect = 7e-20, Method: Composition-based stats.
Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 18/198 (9%)
Query: 15 TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKL 74
+ ++ R +K + LW++ L E + + H D+ AGA+++ + YQANV T+
Sbjct: 2 SDELERQGVKT--NNKLWTATALINELDKVYQAHWDYFTAGAELVITDTYQANVQVFTQA 59
Query: 75 GYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG-HIETAASIGPYGTVLRD 133
GYSEQEA + +V++ A+D Q TG H A ++G YG L D
Sbjct: 60 GYSEQEAEKFIRDAVKVAKKARDDYEQK------------TGKHNYVAGTVGSYGAYLAD 107
Query: 134 GSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQ 193
G+EY G Y ++E + +A+H P + ++ D +ALET P E LA++ L+E
Sbjct: 108 GNEYRGDY--ELSELEYLAFHLPRLRQILAEKPDLIALETQPKLDEPLAVLNWLKENASD 165
Query: 194 -KAWLSFSCKDDTHTSHG 210
++SF+ KD TH S G
Sbjct: 166 YPIYVSFTLKDATHISDG 183
Score = 62.8 bits (151), Expect = 5e-07, Method: Composition-based stats.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 26/201 (12%)
Query: 273 TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSE 332
+ ++ R +K + LW++ L E + + H D+ E V+ D +
Sbjct: 2 SDELERQGVKT--NNKLWTATALINELDKVYQAHWDYFTAGAEL---------VITDTYQ 50
Query: 333 YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT------AASIGPYGTV 386
+ V T+A + E +R V + +T A ++G YG
Sbjct: 51 AN---VQVFTQA---GYSEQEAEKFIRDAVKVAKKARDDYEQKTGKHNYVAGTVGSYGAY 104
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446
L DG+EY G Y ++E + +A+H P + ++ D +ALET P E LA++ L+E
Sbjct: 105 LADGNEYRGDY--ELSELEYLAFHLPRLRQILAEKPDLIALETQPKLDEPLAVLNWLKEN 162
Query: 447 PGQ-KAWLSFSCKDDTHTSHG 466
++SF+ KD TH S G
Sbjct: 163 ASDYPIYVSFTLKDATHISDG 183
>gi|448099028|ref|XP_004199050.1| Piso0_002454 [Millerozyma farinosa CBS 7064]
gi|359380472|emb|CCE82713.1| Piso0_002454 [Millerozyma farinosa CBS 7064]
Length = 334
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 131/273 (47%), Gaps = 33/273 (12%)
Query: 30 PLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLG--YSEQEALDLLHK 87
PLWS+ L EP+ E H ++ +G++II + YQA++ L K G +S+++AL L K
Sbjct: 40 PLWSTRVLINEPKLVEEVHYRYLMSGSNIITTCTYQASLCGLLKYGDHFSKEDALGLWQK 99
Query: 88 SVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTE 147
SV + SA + + + A SIGPYG L DGSEYSG+Y D +
Sbjct: 100 SVDVGKSAARRYYKECS---------RAQRVLIAGSIGPYGAYLADGSEYSGNYGD-FSN 149
Query: 148 ADLIAWHRPNVEALV-RAGVDYLALETIPAEKEALALVKLLREF-----PGQKAWLSFSC 201
L +H ++ L+ VD + +ET+P+ +E L KL + +K + SF
Sbjct: 150 KQLEQFHFDLMKFLILNKDVDLIGVETLPSLREFKVLFKLFLKLSNKYNSNKKIYFSFDF 209
Query: 202 KDDTHTSHGELISSAV--------TSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHP 253
K++ G + + S LAN I AIG NC+ V++++ K +
Sbjct: 210 KNEHVLCDGSSMENVFFFINKHLAKSQSLAN--NILAIGCNCIDYKLVTSILEQFKYLNT 267
Query: 254 -TVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD 285
V TIVYPN G G T + H KD+D
Sbjct: 268 FEVPTIVYPNFGFTYNKG--TDRYKAH--KDLD 296
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 133/305 (43%), Gaps = 29/305 (9%)
Query: 288 PLWSSVYLTTEPEACVETHRDFIRGH---IETAASIGPYGTVLRDGSEYSGHYVDSMTEA 344
PLWS+ L EP+ E H ++ I T +L+ Y D ++
Sbjct: 40 PLWSTRVLINEPKLVEEVHYRYLMSGSNIITTCTYQASLCGLLK--------YGDHFSKE 91
Query: 345 DLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEA 404
D + + +V+ A Y + A SIGPYG L DGSEYSG+Y D +
Sbjct: 92 DALGLWQKSVDVGKSAARRYYKECSRAQRVLIAGSIGPYGAYLADGSEYSGNYGD-FSNK 150
Query: 405 DLIAWHRPNVEALV-RAGVDYLALETIPAEKEALALVKLLREF-----PGQKAWLSFSCK 458
L +H ++ L+ VD + +ET+P+ +E L KL + +K + SF K
Sbjct: 151 QLEQFHFDLMKFLILNKDVDLIGVETLPSLREFKVLFKLFLKLSNKYNSNKKIYFSFDFK 210
Query: 459 DDTHTSHGELISSAV--------TSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHP- 509
++ G + + S LAN I AIG NC+ V++++ K +
Sbjct: 211 NEHVLCDGSSMENVFFFINKHLAKSQSLAN--NILAIGCNCIDYKLVTSILEQFKYLNTF 268
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMR 569
V TIVYPN G ++ ++ +D +WL+ V +IGGCC EI+ +
Sbjct: 269 EVPTIVYPNFGFTYNKGTDRYKAHKDLDKWKRLANEWLDYNVKLIGGCCSTGPQEIKIIS 328
Query: 570 IMIDE 574
++ E
Sbjct: 329 DLLKE 333
>gi|284991488|ref|YP_003410042.1| homocysteine S-methyltransferase [Geodermatophilus obscurus DSM
43160]
gi|284064733|gb|ADB75671.1| homocysteine S-methyltransferase [Geodermatophilus obscurus DSM
43160]
Length = 314
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 102/228 (44%), Gaps = 22/228 (9%)
Query: 353 NVEALVRAGVDYLALIKPSISS-----------QTAASIGPYGTVLRDGSEYSGHYVDSM 401
+VE L AG+D + + S A S+GPYG L DGSEY+G Y D +
Sbjct: 72 SVEGLAAAGLDATEARRLVVRSVHLAERGAPDAWIAGSVGPYGAALADGSEYTGAYADEI 131
Query: 402 TEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDT 461
L WHRP +E L AG D LA ET+PA EA AL++ + G WLS + D+
Sbjct: 132 GVDRLRQWHRPRMEWLAEAGADVLACETVPAAAEAEALLEEA-DMLGMPVWLSLTTVLDS 190
Query: 462 ----HTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYP 517
T GE + + + D + A+GVNC P V L +VYP
Sbjct: 191 DGVVRTRRGE--PAGEVFAMARDLDAVVAVGVNCTDPDGV--LAAVTAAGVAGRPVVVYP 246
Query: 518 NKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
N G WD+ +W T H W+ G ++GGCC V I
Sbjct: 247 NSGERWDAAGRRWTGTAGLSP--HNALTWVHAGARLVGGCCRVGPRSI 292
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 120/266 (45%), Gaps = 38/266 (14%)
Query: 9 LLDGSFTSQVSRHTIKDVDGH----PLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
+LDG +Q+ + GH LWSS L PEA V H F AGA + ++ Y
Sbjct: 16 VLDGGLATQL------EAQGHDLSSELWSSRLLHDAPEAVVAAHAAFAAAGAQVATTASY 69
Query: 65 QANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
Q +V+ L G EA L+ +SV L E PD + A S+
Sbjct: 70 QVSVEGLAAAGLDATEARRLVVRSVHL------AERGAPDAWI-------------AGSV 110
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GPYG L DGSEY+G Y D + L WHRP +E L AG D LA ET+PA EA AL+
Sbjct: 111 GPYGAALADGSEYTGAYADEIGVDRLRQWHRPRMEWLAEAGADVLACETVPAAAEAEALL 170
Query: 185 KLLREFPGQKAWLSFSCKDDT----HTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 240
+ + G WLS + D+ T GE + + + D + A+GVNC P
Sbjct: 171 EEA-DMLGMPVWLSLTTVLDSDGVVRTRRGE--PAGEVFAMARDLDAVVAVGVNCTDPDG 227
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKGVK 266
V L +VYPN G +
Sbjct: 228 V--LAAVTAAGVAGRPVVVYPNSGER 251
>gi|115440233|ref|NP_001044396.1| Os01g0772900 [Oryza sativa Japonica Group]
gi|53793355|dbj|BAD52936.1| putative homocysteine S-methyltransferase 4 [Oryza sativa Japonica
Group]
gi|56785223|dbj|BAD82075.1| putative homocysteine S-methyltransferase 4 [Oryza sativa Japonica
Group]
gi|113533927|dbj|BAF06310.1| Os01g0772900 [Oryza sativa Japonica Group]
gi|125572190|gb|EAZ13705.1| hypothetical protein OsJ_03627 [Oryza sativa Japonica Group]
gi|215706957|dbj|BAG93417.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740889|dbj|BAG97045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189133|gb|EEC71560.1| hypothetical protein OsI_03916 [Oryza sativa Indica Group]
Length = 328
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 123/262 (46%), Gaps = 42/262 (16%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG +++ H D LWS+ L + P + H D++ AGA+II S+ YQA +
Sbjct: 26 VVDGGLATELEAHGADLHD--ELWSASCLVSAPHLIRKVHLDYLDAGANIITSASYQATI 83
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK----DKENQTPDINLNKTFNLLTGHIETAASI 124
G S + + LL +SV + A+ + ++ P N + + AASI
Sbjct: 84 QGFQARGLSRERSEALLRRSVHIAQEARAIFAEGWSKGPYANHRSSPRR---PVLVAASI 140
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
G YG L DGSEY+G Y S+T+ L ++HR ++ L AG D +A ETIP + EA A
Sbjct: 141 GSYGAYLADGSEYTGDYGISVTKETLKSFHRRRLQVLADAGPDLIAFETIPNKLEAQASG 200
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
+ E A ++ +C ++ A+GVNC P V L
Sbjct: 201 DPITEC----AAVADACA------------------------RVGAVGVNCTAPRLVHGL 232
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ I++ S P V VYPN G
Sbjct: 233 ILSIRKVTSKPVV---VYPNSG 251
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 146/347 (42%), Gaps = 77/347 (22%)
Query: 254 TVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFI--R 311
++ V G ++DG +++ H D LWS+ L + P + H D++
Sbjct: 13 ALRRFVREAGGCAVVDGGLATELEAHGADLHD--ELWSASCLVSAPHLIRKVHLDYLDAG 70
Query: 312 GHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPS 371
+I T+AS Y ++ R EAL+R V ++A +
Sbjct: 71 ANIITSAS-----------------YQATIQGFQARGLSRERSEALLRRSV-HIAQEARA 112
Query: 372 ISSQ-------------------TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRP 412
I ++ AASIG YG L DGSEY+G Y S+T+ L ++HR
Sbjct: 113 IFAEGWSKGPYANHRSSPRRPVLVAASIGSYGAYLADGSEYTGDYGISVTKETLKSFHRR 172
Query: 413 NVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSA 472
++ L AG D +A ETIP + EA A + E A ++ +C
Sbjct: 173 RLQVLADAGPDLIAFETIPNKLEAQASGDPITEC----AAVADACA-------------- 214
Query: 473 VTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKW 530
++ A+GVNC P V L+ I++ S P V VYPN G + + +W
Sbjct: 215 ----------RVGAVGVNCTAPRLVHGLILSIRKVTSKPVV---VYPNSGETYVAETKEW 261
Query: 531 LDTE---DEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDE 574
+++E E + V +W + G ++GGCC + ++ + + E
Sbjct: 262 VESEGGASETDFVSCVGKWRQAGAALVGGCCRTSPATVRAISWALRE 308
>gi|326776008|ref|ZP_08235273.1| Homocysteine S-methyltransferase [Streptomyces griseus XylebKG-1]
gi|326656341|gb|EGE41187.1| Homocysteine S-methyltransferase [Streptomyces griseus XylebKG-1]
Length = 305
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 120/258 (46%), Gaps = 23/258 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG ++Q+ D LWS+ L PE H ++RAGA ++ ++ YQA
Sbjct: 17 LLDGGLSNQLEAQGCDLSD--ALWSARLLADAPEQIEAAHLAYLRAGARVLITASYQATF 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ + G LL +SV+L A D + AAS+GPYG
Sbjct: 75 EGFGRYGLDRAATGALLARSVELARGAADAARRADPGR----------EAWVAASVGPYG 124
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
+L DGSEY G Y S+ E L +HRP V AL AG D LALET+P EA ALV++
Sbjct: 125 AMLADGSEYRGRYGLSVRE--LERFHRPRVAALAAAGPDALALETVPDLDEAEALVRVAE 182
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR-- 246
E G WLS+S D T G+ + A + A D + A+GVNC P V
Sbjct: 183 E-TGLPYWLSYSVADG-RTRAGQPLQEAFA--VAAGRDSVLAVGVNCCDPQEAQGAVEQA 238
Query: 247 CIKQSHPTVQTIVYPNKG 264
P V VYPN G
Sbjct: 239 VAVTGRPAV---VYPNSG 253
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 137/311 (44%), Gaps = 26/311 (8%)
Query: 254 TVQTIVYP-NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRG 312
TV+T+ + G LLDG ++Q+ D LWS+ L PE H ++R
Sbjct: 3 TVRTLAEALDAGPVLLDGGLSNQLEAQGCDLSD--ALWSARLLADAPEQIEAAHLAYLRA 60
Query: 313 HIETAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYLALIKPS 371
+ T E G Y +D L+A +VE L R D P
Sbjct: 61 GARVLITASYQATF-----EGFGRYGLDRAATGALLA---RSVE-LARGAADAARRADPG 111
Query: 372 ISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
+ AAS+GPYG +L DGSEY G Y S+ E L +HRP V AL AG D LALET+P
Sbjct: 112 REAWVAASVGPYGAMLADGSEYRGRYGLSVRE--LERFHRPRVAALAAAGPDALALETVP 169
Query: 432 AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 491
EA ALV++ E G WLS+S D T G+ + A + A D + A+GVNC
Sbjct: 170 DLDEAEALVRVAEE-TGLPYWLSYSVADG-RTRAGQPLQEAFA--VAAGRDSVLAVGVNC 225
Query: 492 VRPSHVSTLVR--CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEE 549
P V P V VYPN G WD+ W T V W
Sbjct: 226 CDPQEAQGAVEQAVAVTGRPAV---VYPNSGEGWDAGARGW--TGHGTFDPGRVRAWTRA 280
Query: 550 GVNIIGGCCEV 560
G ++GGCC V
Sbjct: 281 GAGLVGGCCRV 291
>gi|401407288|ref|XP_003883093.1| GJ17676, related [Neospora caninum Liverpool]
gi|325117509|emb|CBZ53061.1| GJ17676, related [Neospora caninum Liverpool]
Length = 431
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 134/309 (43%), Gaps = 55/309 (17%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V LLDG + + R + +G PLW+S + P+ H DF AGAD+ ++ YQA
Sbjct: 10 VVLLDGGLGTHL-RALGAEFNGDPLWASKAVLVAPDLVRRAHYDFYHAGADVAITATYQA 68
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAK----------------DKENQTPDINLNKT 110
++ K+G S A + + ++ L A+ ++EN+ P+ +
Sbjct: 69 SLTGFAKIGLSPSNAHEAVALAINLAAEARQLDEDGDAPACSSAGDERENEGPEARTPEA 128
Query: 111 FNLL-TGHIETA-----------------ASIGPYGTVLRDGSEYSGHYVDSMTEADLIA 152
+ G + S G YG+ L G+EY G+Y ++E
Sbjct: 129 PSTAGKGGFQEVHARDADRPRRRRNRKIFVSNGSYGSALGGGAEYRGNY--GVSEEVFHD 186
Query: 153 WHRPNVEALVRAG--VDYLALETIPAEKEALALVKLLREFPG--QKAWLSFSCKDDTHTS 208
+HR ++A + VD + ET+P EA A+V LLREFP K W+SF+CK T +
Sbjct: 187 YHRWRLQAALELEHLVDGVVFETLPESAEAKAIVSLLREFPSLRGKTWISFTCKSPTQLA 246
Query: 209 HGELISSAVTSCL-LANPD-QIQAIGVNCV-----------RPSHVSTLVRCIKQSHP-T 254
+GE SAV L L D I IGVNC+ P S V K P
Sbjct: 247 NGEDFRSAVADVLKLDGRDCYISGIGVNCLPVSTTVPLLCSPPLRDSLAVSLEKSRDPWN 306
Query: 255 VQTIVYPNK 263
+ + YPN
Sbjct: 307 LHVVCYPNN 315
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 113/275 (41%), Gaps = 77/275 (28%)
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG--VDYLALETIPAEKEA 436
S G YG+ L G+EY G+Y ++E +HR ++A + VD + ET+P EA
Sbjct: 159 SNGSYGSALGGGAEYRGNY--GVSEEVFHDYHRWRLQAALELEHLVDGVVFETLPESAEA 216
Query: 437 LALVKLLREFPG--QKAWLSFSCKDDTHTSHGELISSAVTSCL-LANPD-QIQAIGVNCV 492
A+V LLREFP K W+SF+CK T ++GE SAV L L D I IGVNC+
Sbjct: 217 KAIVSLLREFPSLRGKTWISFTCKSPTQLANGEDFRSAVADVLKLDGRDCYISGIGVNCL 276
Query: 493 -----------RPSHVSTLVRCIKQSHP-TVQTIVYPNKGGVWDS--------------- 525
P S V K P + + YPN G ++
Sbjct: 277 PVSTTVPLLCSPPLRDSLAVSLEKSRDPWNLHVVCYPNNEGARNAAATSAKPESPEVCQE 336
Query: 526 -VH--------------------MKWL-----------------DTEDEYSILH----YV 543
VH M +L + ++S+ H V
Sbjct: 337 LVHGAAPRECDLVDRTTASAPTKMTYLAESAPDGQCGHATLPANPSSRDFSLKHPLASQV 396
Query: 544 PQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEFNTK 578
WL+ GV+ +GGCC + +++++ +++ +
Sbjct: 397 SAWLKGGVSAVGGCCGTSPEDVKEIGAVLENLRVR 431
>gi|182435369|ref|YP_001823088.1| homocysteine methyltransferase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178463885|dbj|BAG18405.1| putative homocysteine S-methyltransferase [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 307
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 124/259 (47%), Gaps = 25/259 (9%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG ++Q+ D LWS+ L PE H ++RAGA ++ ++ YQA
Sbjct: 19 LLDGGLSNQLEAQGCDLSD--ALWSARLLADAPEQIEAAHLAYLRAGARVLITASYQATF 76
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQT-PDINLNKTFNLLTGHIETAASIGPY 127
+ + G LL +SV+L A + + P +T+ AAS+GPY
Sbjct: 77 EGFGRYGLDRAATGALLARSVELARRAAEAARRADPG---RETW--------VAASVGPY 125
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G +L DGSEY G Y S+ E L +HRP V AL AG D LALET+P EA ALV++
Sbjct: 126 GAMLADGSEYRGRYGLSVRE--LERFHRPRVAALAAAGPDALALETVPDLDEAEALVRVA 183
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR- 246
E G WLS+S D T G+ + A + A D + A+GVNC P V
Sbjct: 184 EE-TGLPYWLSYSVADG-RTRAGQPLQEAFA--VAAGRDSVLAVGVNCCDPQEARGAVEQ 239
Query: 247 -CIKQSHPTVQTIVYPNKG 264
P V VYPN G
Sbjct: 240 AVAVTGRPAV---VYPNSG 255
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 137/311 (44%), Gaps = 26/311 (8%)
Query: 254 TVQTIVYP-NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRG 312
TV+T+ + G LLDG ++Q+ D LWS+ L PE H ++R
Sbjct: 5 TVRTLAEALDAGPVLLDGGLSNQLEAQGCDLSD--ALWSARLLADAPEQIEAAHLAYLRA 62
Query: 313 HIETAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYLALIKPS 371
+ T E G Y +D L+A +VE L R + P
Sbjct: 63 GARVLITASYQATF-----EGFGRYGLDRAATGALLA---RSVE-LARRAAEAARRADPG 113
Query: 372 ISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
+ AAS+GPYG +L DGSEY G Y S+ E L +HRP V AL AG D LALET+P
Sbjct: 114 RETWVAASVGPYGAMLADGSEYRGRYGLSVRE--LERFHRPRVAALAAAGPDALALETVP 171
Query: 432 AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 491
EA ALV++ E G WLS+S D T G+ + A + A D + A+GVNC
Sbjct: 172 DLDEAEALVRVAEE-TGLPYWLSYSVADG-RTRAGQPLQEAFA--VAAGRDSVLAVGVNC 227
Query: 492 VRPSHVSTLVR--CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEE 549
P V P V VYPN G WD+ W T V W
Sbjct: 228 CDPQEARGAVEQAVAVTGRPAV---VYPNSGEGWDAGARGW--TGHGTFDPGQVRAWTRA 282
Query: 550 GVNIIGGCCEV 560
G ++GGCC V
Sbjct: 283 GARLVGGCCRV 293
>gi|149920658|ref|ZP_01909123.1| homocysteine methyltransferase [Plesiocystis pacifica SIR-1]
gi|149818445|gb|EDM77894.1| homocysteine methyltransferase [Plesiocystis pacifica SIR-1]
Length = 325
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 127/280 (45%), Gaps = 40/280 (14%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG + + D+D PLWS+ L +PEA HR + AGADI+ ++ YQA++
Sbjct: 22 VLDGGLATSLEACGC-DLD-DPLWSARLLLDDPEALRTVHRRWRDAGADILATASYQASL 79
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
L G SE A LL +SV L +A D+ N + AAS+G YG
Sbjct: 80 PGLRAKGLSEARAKALLRESVTLTRAAADEANAPRPL--------------IAASVGSYG 125
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP---AEKEALALVK 185
L DGSEY G Y ++ L +HRP + L AG D +A ET P L+
Sbjct: 126 AYLADGSEYRGGY--GLSVEALADFHRPRLLELAAAGPDLIAFETFPDAVELAALAELLT 183
Query: 186 LLREFPGQ---KAWLSFSCKD-----DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 237
L G +AW+S S + G ++ A+ L + ++ A+GVNCV
Sbjct: 184 ELLTELGDTLPRAWISASLSPPGPDRSVRLADGTPLTKALAP--LTDHPKVAALGVNCVG 241
Query: 238 PSHVS----TLVRCIKQSHPTVQTIVYPNKGVKLLDGSFT 273
P V+ L C + + YPN G + +D ++
Sbjct: 242 PREVAPALEVLAACTDR-----PLVAYPNSGERWIDRGWS 276
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 132/318 (41%), Gaps = 41/318 (12%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG + + D+D PLWS+ L +PEA HR + + A+ ++
Sbjct: 22 VLDGGLATSLEACGC-DLD-DPLWSARLLLDDPEALRTVHRRWRDAGADILATASYQASL 79
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
G ++EA A R +V L RA D +P I AAS+G YG
Sbjct: 80 -------PGLRAKGLSEARAKALLRESVT-LTRAAADEANAPRPLI----AASVGSYGAY 127
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP---AEKEALALVKLL 443
L DGSEY G Y ++ L +HRP + L AG D +A ET P L+ L
Sbjct: 128 LADGSEYRGGY--GLSVEALADFHRPRLLELAAAGPDLIAFETFPDAVELAALAELLTEL 185
Query: 444 REFPGQ---KAWLSFSCKD-----DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
G +AW+S S + G ++ A+ L + ++ A+GVNCV P
Sbjct: 186 LTELGDTLPRAWISASLSPPGPDRSVRLADGTPLTKALAP--LTDHPKVAALGVNCVGPR 243
Query: 496 HVS----TLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQ-WLEEG 550
V+ L C + + YPN G W + W E + + + W E G
Sbjct: 244 EVAPALEVLAACTDR-----PLVAYPNSGERW--IDRGWSGAALEPNKFAALAERWFELG 296
Query: 551 VNIIGGCCEVTSYEIQQM 568
+IGGCC IQ +
Sbjct: 297 ARLIGGCCRTNYAHIQAL 314
>gi|326432000|gb|EGD77570.1| homocysteine methyltransferase [Salpingoeca sp. ATCC 50818]
Length = 460
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 90/164 (54%), Gaps = 17/164 (10%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIA-WHRPNVEALVRAGVDYLALETIPAEKE 435
AASIGPYG L DGSEY G Y +A+ +A +H L RA D LA ETIP E
Sbjct: 209 AASIGPYGAFLADGSEYRGGY-----DAERLAQFHHEKALILWRARPDVLAFETIPQASE 263
Query: 436 ALALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQ----IQAIGVN 490
ALA+V +++E P WLSF C D + G+ +++AV S + A +Q + IGVN
Sbjct: 264 ALAIVGMMQETLPEAPYWLSFQCCDAHRLASGDDVTAAVASLVTAFDEQRAGSLIGIGVN 323
Query: 491 CVRPSHVSTLV----RCIKQSHPTVQTIVYPNKGGVWDSVHMKW 530
C+ P+ + LV RC+ + + + YPNKG WD+ W
Sbjct: 324 CISPAIAAPLVTAIARCVGRRR--LHVLCYPNKGEAWDADTRTW 365
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 86/154 (55%), Gaps = 17/154 (11%)
Query: 121 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIA-WHRPNVEALVRAGVDYLALETIPAEKE 179
AASIGPYG L DGSEY G Y +A+ +A +H L RA D LA ETIP E
Sbjct: 209 AASIGPYGAFLADGSEYRGGY-----DAERLAQFHHEKALILWRARPDVLAFETIPQASE 263
Query: 180 ALALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQ----IQAIGVN 234
ALA+V +++E P WLSF C D + G+ +++AV S + A +Q + IGVN
Sbjct: 264 ALAIVGMMQETLPEAPYWLSFQCCDAHRLASGDDVTAAVASLVTAFDEQRAGSLIGIGVN 323
Query: 235 CVRPSHVSTLV----RCIKQSHPTVQTIVYPNKG 264
C+ P+ + LV RC+ + + + YPNKG
Sbjct: 324 CISPAIAAPLVTAIARCVGRRR--LHVLCYPNKG 355
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 33 SSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTK-LGYSEQEALDLLHKSVQL 91
S V+ T A ++ HR F+ AGADI+ + YQ V + +G SE+EA + SV L
Sbjct: 68 SHVFSDTNHRAVIDAHRAFLEAGADILTTVSYQGTVAGFKRDMGLSEEEASHAIALSVTL 127
Query: 92 MNSA 95
+A
Sbjct: 128 ARTA 131
>gi|345562713|gb|EGX45749.1| hypothetical protein AOL_s00140g65 [Arthrobotrys oligospora ATCC
24927]
Length = 342
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 153/350 (43%), Gaps = 58/350 (16%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ +LDG+ + + T + PLWSS+ L P + H +I+AGA I+++ YQ
Sbjct: 5 IIILDGALGTLLCDTTSPEASASPLWSSIDLLHNPSRLADVHAQYIKAGAGCIETATYQL 64
Query: 67 NVDNLTKLGYSEQEAL-DLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
+ L + G S+++ + + H ++QL A T + N N + A S+G
Sbjct: 65 CRETLLRSGVSDEDQMRKICHAAMQLAVDATKDLKPTGNNNNNAS---------VALSLG 115
Query: 126 PYGTVLRDGSEYSGHY-----VDSMTEAD-LIAWHRPNVEALVRAG------VDYLALET 173
P+G L EYSG Y DS D L WHR ++A +A +D LA ET
Sbjct: 116 PFGMCLHPSQEYSGAYPPPYNTDSADAVDALEKWHRDRLQAFQKASNDAFEEIDILAFET 175
Query: 174 IPAEK--EALALVKLL--REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP--DQ 227
+P ++ E +A+ +++ EF G+KAW+S T E+I P
Sbjct: 176 VPYKRVDEIIAIRRVIDSEEFRGRKAWISMVY---TEVPKEEVIGRITRKVFEDIPFGST 232
Query: 228 IQAIGVNCVRPSHVSTLVRCIKQS-------HPTVQTIVYPNKGVKLLDGSFTSQVSRHT 280
+ IG+NC + +V +VR ++ V ++YP DG T V+ T
Sbjct: 233 QRGIGINCTKLENVREIVRVYSKTIIDIGIRKEDVFLVLYP-------DGGLTYDVNTKT 285
Query: 281 IKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDG 330
D +G A VE ++ +E A + G +G+++ G
Sbjct: 286 WSDENGM-------------AEVEKWCRLLQKIVEEAVNDGCWGSIIIGG 322
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 151/346 (43%), Gaps = 58/346 (16%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIR---GHIETAASIG 321
+ +LDG+ + + T + PLWSS+ L P + H +I+ G IETA
Sbjct: 5 IIILDGALGTLLCDTTSPEASASPLWSSIDLLHNPSRLADVHAQYIKAGAGCIETATYQL 64
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASI- 380
T+LR G +++ D + R A ++ VD +KP+ ++ AS+
Sbjct: 65 CRETLLRSG----------VSDEDQM---RKICHAAMQLAVDATKDLKPTGNNNNNASVA 111
Query: 381 ---GPYGTVLRDGSEYSGHY-----VDSMTEAD-LIAWHRPNVEALVRAG------VDYL 425
GP+G L EYSG Y DS D L WHR ++A +A +D L
Sbjct: 112 LSLGPFGMCLHPSQEYSGAYPPPYNTDSADAVDALEKWHRDRLQAFQKASNDAFEEIDIL 171
Query: 426 ALETIPAEK--EALALVKLL--REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP 481
A ET+P ++ E +A+ +++ EF G+KAW+S T E+I P
Sbjct: 172 AFETVPYKRVDEIIAIRRVIDSEEFRGRKAWISMVY---TEVPKEEVIGRITRKVFEDIP 228
Query: 482 --DQIQAIGVNCVRPSHVSTLVRCIKQS-------HPTVQTIVYPNKGGVWDSVHMKWLD 532
+ IG+NC + +V +VR ++ V ++YP+ G +D W D
Sbjct: 229 FGSTQRGIGINCTKLENVREIVRVYSKTIIDIGIRKEDVFLVLYPDGGLTYDVNTKTWSD 288
Query: 533 TEDEYSILHY---VPQWLEEGVN-------IIGGCCEVTSYEIQQM 568
+ + + + +EE VN IIGGCC+ T I ++
Sbjct: 289 ENGMAEVEKWCRLLQKIVEEAVNDGCWGSIIIGGCCKTTPEHISEL 334
>gi|384499212|gb|EIE89703.1| hypothetical protein RO3G_14414 [Rhizopus delemar RA 99-880]
Length = 291
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 131/263 (49%), Gaps = 46/263 (17%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG F +++ + KD+ +GA++ + YQA++
Sbjct: 8 VLDGGFATELEKQFKKDL---------------------------SGANVATTCSYQASI 40
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK-ENQTPDINLNKTFNLLTGHIETAASIGPY 127
+ + GY+ + ++L++KS+ L A+D+ + P+ +K L+ A SIG Y
Sbjct: 41 EGFLQAGYTREHGVELMNKSISLACEARDEFRKEHPE---DKEERLV------ALSIGCY 91
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV-RAGVDYLALETIPAEKEALALVKL 186
G +L +GSEY+G Y ++T L+ +H+ +E + GVD++ ETIP+ EA A+VK+
Sbjct: 92 GAILANGSEYTGDY-GNITIDRLVQFHKDRLEIFLGNKGVDFVLFETIPSVLEAEAIVKI 150
Query: 187 LREFPG-QKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
++E ++F C+ D + G + ++ L D + A+GVNC +P H+ LV
Sbjct: 151 MKEMNDLPPVGVAFQCRSDHQIADGTDLLYVLS--LFDKLDCVFAVGVNCTKPQHIERLV 208
Query: 246 RCI----KQSHPTVQTIVYPNKG 264
I K+ ++YP+ G
Sbjct: 209 SRIVEVNKEKEDKKALLLYPDGG 231
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV-RAGVDYLALETIPAEK 434
A SIG YG +L +GSEY+G Y ++T L+ +H+ +E + GVD++ ETIP+
Sbjct: 84 VALSIGCYGAILANGSEYTGDY-GNITIDRLVQFHKDRLEIFLGNKGVDFVLFETIPSVL 142
Query: 435 EALALVKLLREFPG-QKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
EA A+VK+++E ++F C+ D + G + ++ L D + A+GVNC +
Sbjct: 143 EAEAIVKIMKEMNDLPPVGVAFQCRSDHQIADGTDLLYVLS--LFDKLDCVFAVGVNCTK 200
Query: 494 PSHVSTLVRCI----KQSHPTVQTIVYPNKGGVWDSVHMKWLDT----EDEYSILHYVPQ 545
P H+ LV I K+ ++YP+ G VWD+V W + +D++ L
Sbjct: 201 PQHIERLVSRIVEVNKEKEDKKALLLYPDGGEVWDAVARSWDSSCKLAKDKFGFLLSKCV 260
Query: 546 WLEEGVNIIGGCCEVTSYEIQQMR 569
+ ++GGCC I+ ++
Sbjct: 261 QDYDSRVLVGGCCGTGPDHIKSLK 284
>gi|448102884|ref|XP_004199901.1| Piso0_002454 [Millerozyma farinosa CBS 7064]
gi|359381323|emb|CCE81782.1| Piso0_002454 [Millerozyma farinosa CBS 7064]
Length = 334
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 124/251 (49%), Gaps = 25/251 (9%)
Query: 30 PLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLG--YSEQEALDLLHK 87
PLWS+ L +P+ E H ++ +G++II + YQA+++ L K G +S+++AL L K
Sbjct: 40 PLWSTRVLINDPKLVEEVHYRYLMSGSNIITTCTYQASLNGLLKYGDQFSKEDALGLWQK 99
Query: 88 SVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTE 147
SV + SA + + T + A SIGPYG L DGSEY+G+Y D E
Sbjct: 100 SVDVAKSAARRYYKEHS---------QTQKVLIAGSIGPYGAYLADGSEYTGNYGDFSNE 150
Query: 148 ADLIAWHRPNVEALV-RAGVDYLALETIPAEKEALALVKLLREF-----PGQKAWLSFSC 201
L +H ++ L+ VD + +ET+P+ +E L KL + +K + SF+
Sbjct: 151 -HLEKFHFDLMKFLILNKDVDLIGVETVPSLREFKVLFKLFLKLSEKYNSTKKIYFSFNF 209
Query: 202 KDDTHTSHG---ELISSAVTSCLLANP---DQIQAIGVNCVRPSHVSTLVRCIKQSHP-T 254
K++ G E + + L P + AIG NCV V++++ K +
Sbjct: 210 KNEHELCDGSSMEKVFFFLNKHLAKTPVLAKSVLAIGCNCVDYKLVTSILDQFKYLNTFE 269
Query: 255 VQTIVYPNKGV 265
+ IVYPN G
Sbjct: 270 IPAIVYPNFGF 280
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 129/295 (43%), Gaps = 25/295 (8%)
Query: 288 PLWSSVYLTTEPEACVETHRDFIRGH---IETAASIGPYGTVLRDGSEYSGHYVDSMTEA 344
PLWS+ L +P+ E H ++ I T +L+ G ++S E
Sbjct: 40 PLWSTRVLINDPKLVEEVHYRYLMSGSNIITTCTYQASLNGLLKYGDQFS-------KED 92
Query: 345 DLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEA 404
L W + +V+ A Y + A SIGPYG L DGSEY+G+Y D E
Sbjct: 93 ALGLWQK-SVDVAKSAARRYYKEHSQTQKVLIAGSIGPYGAYLADGSEYTGNYGDFSNE- 150
Query: 405 DLIAWHRPNVEALV-RAGVDYLALETIPAEKEALALVKLLREF-----PGQKAWLSFSCK 458
L +H ++ L+ VD + +ET+P+ +E L KL + +K + SF+ K
Sbjct: 151 HLEKFHFDLMKFLILNKDVDLIGVETVPSLREFKVLFKLFLKLSEKYNSTKKIYFSFNFK 210
Query: 459 DDTHTSHG---ELISSAVTSCLLANP---DQIQAIGVNCVRPSHVSTLVRCIKQSHP-TV 511
++ G E + + L P + AIG NCV V++++ K + +
Sbjct: 211 NEHELCDGSSMEKVFFFLNKHLAKTPVLAKSVLAIGCNCVDYKLVTSILDQFKYLNTFEI 270
Query: 512 QTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQ 566
IVYPN G ++ + +D + +WL+ V IIGGCC EI+
Sbjct: 271 PAIVYPNFGFAYNKDTGNYEAHKDLDNWKRLANEWLDYNVKIIGGCCSTGPQEIK 325
>gi|344230262|gb|EGV62147.1| Homocysteine S-methyltransferase [Candida tenuis ATCC 10573]
Length = 296
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 123/257 (47%), Gaps = 28/257 (10%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ ++ + T + G PLW+ + P+ + H +I+AG DI+ ++ YQ +
Sbjct: 3 VLDGALGIELDKLT--PIRGTPLWAGHAVEESPDIVRQVHSRYIQAGCDIVSTATYQMSY 60
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
L + + + +V ++ A+D + I A +IGPYG
Sbjct: 61 QALRQTDHDDAGTTAAWKAAVDVVVQARDGAG-------------VDRKILIAGTIGPYG 107
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEALALVKLL 187
+ DGSEY+G+Y DS T L A HRP VE L + G VD +A ET+P+ E A+V L
Sbjct: 108 CFVNDGSEYTGNYTDSPTAEWLAAHHRPLVEFLEKNGDVDVIAFETVPSAVELEAIVALD 167
Query: 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
+ P W+S S +L++ A + L + A+GVNCV S VS +
Sbjct: 168 VQKP---YWVSLCVN-----SSMDLVACA--AVLRRCNSSLVAVGVNCVEYSKVSGYLEA 217
Query: 248 IKQSHPTVQTIVYPNKG 264
+ S V I YPN G
Sbjct: 218 L--SAVGVPLIAYPNYG 232
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 144/307 (46%), Gaps = 33/307 (10%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIGPY 323
+LDG+ ++ + T + G PLW+ + P+ + H +I+ + TA Y
Sbjct: 3 VLDGALGIELDKLT--PIRGTPLWAGHAVEESPDIVRQVHSRYIQAGCDIVSTATYQMSY 60
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPY 383
+ + + +G D++ V+A AGVD LI A +IGPY
Sbjct: 61 QALRQTDHDDAGTTAAWKAAVDVV------VQARDGAGVDRKILI--------AGTIGPY 106
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEALALVKL 442
G + DGSEY+G+Y DS T L A HRP VE L + G VD +A ET+P+ E A+V L
Sbjct: 107 GCFVNDGSEYTGNYTDSPTAEWLAAHHRPLVEFLEKNGDVDVIAFETVPSAVELEAIVAL 166
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
+ P W+S S +L++ A + L + A+GVNCV S VS +
Sbjct: 167 DVQKP---YWVSLCVN-----SSMDLVACA--AVLRRCNSSLVAVGVNCVEYSKVSGYLE 216
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTS 562
+ S V I YPN G ++ S + D D + V +W++ + IGGCC +
Sbjct: 217 AL--SAVGVPLIAYPNYGYIY-SQEDGYADLSDLGAWETAVAEWMKFDMWAIGGCCGTGA 273
Query: 563 YEIQQMR 569
E+ +R
Sbjct: 274 EEVSVVR 280
>gi|268571807|ref|XP_002648813.1| Hypothetical protein CBG15622 [Caenorhabditis briggsae]
Length = 293
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 12/204 (5%)
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG---VDYLALETIPAEK 434
S+G T D SEYSG Y+D + +A+ A++ + + G + L ETIP+
Sbjct: 98 GSVGTLATFYHDLSEYSGKYMD-LPDAETTAFNYFHKILTIFQGKTKIRNLIFETIPSAL 156
Query: 435 EALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
EA + +L +FP KA SF+ K++ H HGE I + + L QI IG+NC P
Sbjct: 157 EATVALDVLEQFPEMKAIFSFTFKENAHLRHGEHIETILVK--LKKSKQIFGIGINCTDP 214
Query: 495 SHVSTLVRCIKQ-SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNI 553
+V ++++ +K P + VYPN G DS + + V W++ G
Sbjct: 215 ENVLSVLKSVKNLGFPEI--FVYPNMG---DSRFLSGKTENFDLFDKELVENWVKNGTTA 269
Query: 554 IGGCCEVTSYEIQQMRIMIDEFNT 577
IGGCC VT +++ ++ ++D N+
Sbjct: 270 IGGCCGVTENQMRILKKLVDNLNS 293
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 123/270 (45%), Gaps = 44/270 (16%)
Query: 7 VKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
V+L+DGS + Q+ + + ++ P WS ++ + +R F+ G+ II ++ Y
Sbjct: 2 VRLMDGSMSVQLKQFGYDCNALENKPHWS-FPANSDMHLMEQVYRSFLDLGSKIITTNTY 60
Query: 65 QANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG------HI 118
G + LD K++EN KT NLL I
Sbjct: 61 H--------FGSTLDRKLD------------KNEEN------FEKTCNLLVNLAKEYEGI 94
Query: 119 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG---VDYLALETIP 175
S+G T D SEYSG Y+D + +A+ A++ + + G + L ETIP
Sbjct: 95 RIFGSVGTLATFYHDLSEYSGKYMD-LPDAETTAFNYFHKILTIFQGKTKIRNLIFETIP 153
Query: 176 AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 235
+ EA + +L +FP KA SF+ K++ H HGE I + + L QI IG+NC
Sbjct: 154 SALEATVALDVLEQFPEMKAIFSFTFKENAHLRHGEHIETILVK--LKKSKQIFGIGINC 211
Query: 236 VRPSHVSTLVRCIKQ-SHPTVQTIVYPNKG 264
P +V ++++ +K P + VYPN G
Sbjct: 212 TDPENVLSVLKSVKNLGFPEI--FVYPNMG 239
>gi|392970833|ref|ZP_10336234.1| putative homocysteine methyltransferase [Staphylococcus equorum
subsp. equorum Mu2]
gi|392511183|emb|CCI59478.1| putative homocysteine methyltransferase [Staphylococcus equorum
subsp. equorum Mu2]
Length = 300
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 134/288 (46%), Gaps = 32/288 (11%)
Query: 289 LWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA 348
LWSS L +P + H+DF + + S Y Y + T+ I
Sbjct: 34 LWSSEVLRHQPIKIKQAHQDFTNAGADIILT-----------STYQASY-QTFTD---IG 78
Query: 349 WHRPNVEALVRAGVDYLALIKPSISSQTA-ASIGPYGTVLRDGSEYSGHYVDSMTEADLI 407
++ L V+ ++ + ++Q S+GPYG L DGSEY+G+YV ++
Sbjct: 79 MQNEEIDDLFTIAVE--QVMDATNNNQVVVGSLGPYGAYLSDGSEYTGNYV--ISREAYF 134
Query: 408 AWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPG----QKAWLSFSCKDDTHT 463
+ + AL+ G++ ET+P +E A+++ + P Q W+S + D +
Sbjct: 135 KFQEQRINALISRGINDFVFETVPNFEEIQAIIENI--IPSYTEEQTFWISVTVDDTGNL 192
Query: 464 SHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTV-QTI-VYPNKGG 521
S G + + I G+NC S V + R + + ++ QTI +YPN G
Sbjct: 193 SDGTEFEKLI-DYIKQKGTIIPIFGINC---SSVKGINRSLDKGLASLSQTIALYPNGGS 248
Query: 522 VWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMR 569
+++ KW + + I+ VP+WL EGV IIGGCC+ T +I++++
Sbjct: 249 HYNADSKKWENDANSDEIIEQVPKWLMEGVQIIGGCCQTTPEDIKKIK 296
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 112/241 (46%), Gaps = 34/241 (14%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSV- 89
LWSS L +P + H+DF AGADII +S YQA+ T +G +E DL +V
Sbjct: 34 LWSSEVLRHQPIKIKQAHQDFTNAGADIILTSTYQASYQTFTDIGMQNEEIDDLFTIAVE 93
Query: 90 QLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD 149
Q+M++ + NQ S+GPYG L DGSEY+G+YV ++
Sbjct: 94 QVMDATNN--NQV-----------------VVGSLGPYGAYLSDGSEYTGNYV--ISREA 132
Query: 150 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPG----QKAWLSFSCKDDT 205
+ + AL+ G++ ET+P +E A+++ + P Q W+S + D
Sbjct: 133 YFKFQEQRINALISRGINDFVFETVPNFEEIQAIIENI--IPSYTEEQTFWISVTVDDTG 190
Query: 206 HTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTV-QTI-VYPNK 263
+ S G + + I G+NC S V + R + + ++ QTI +YPN
Sbjct: 191 NLSDGTEFEKLI-DYIKQKGTIIPIFGINC---SSVKGINRSLDKGLASLSQTIALYPNG 246
Query: 264 G 264
G
Sbjct: 247 G 247
>gi|341898874|gb|EGT54809.1| hypothetical protein CAEBREN_31638 [Caenorhabditis brenneri]
Length = 340
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 143/329 (43%), Gaps = 42/329 (12%)
Query: 263 KGVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVE-THRDFIR-GHIETAA 318
K +LLDGS + Q+ + + D++ P W+ + ++ +E +R F+ G
Sbjct: 2 KKYRLLDGSMSEQLKQFGYNCNDINNKPHWT--FPANSDQSLMEKVYRSFLDIGVNNITT 59
Query: 319 SIGPYGTVLRD---GSE-----YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKP 370
+ +G++L G E Y ++ D+ + +A +V
Sbjct: 60 NTYHFGSILDKNLSGQEEKCKLYEKYFEDTCSLLCNLAQQYDDV---------------- 103
Query: 371 SISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV--RAGVDYLALE 428
Q S+G + T D SEY+G Y+D+ + + + L R + L E
Sbjct: 104 ----QVWGSVGTFATKFHDCSEYNGKYMDNAGAEESAYEYYKTILTLFQERTTIRNLIFE 159
Query: 429 TIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIG 488
TIP++ E +K+L+EF KA +SF+ ++ HGE ++ L +QI +G
Sbjct: 160 TIPSQLEGEVALKVLKEFKEMKAVISFTFMENACLRHGEHVADIAKK--LKESEQIIGMG 217
Query: 489 VNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQWL 547
+NC P +V ++ IK + VYPN G + V K D D Y H + W+
Sbjct: 218 INCTDPKNVLPVLEAIKNCEFS-DIFVYPNLGDAFFMVAEKGDFDDSDNYD--HRLRSWI 274
Query: 548 EEGVNIIGGCCEVTSYEIQQMRIMIDEFN 576
E G +GGCC + IQ +R +D N
Sbjct: 275 EHGATALGGCCGIDLDMIQDLRSCVDILN 303
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 121/264 (45%), Gaps = 23/264 (8%)
Query: 6 KVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVE-THRDFIRAGADIIQSS 62
K +LLDGS + Q+ + + D++ P W+ + ++ +E +R F+ G + I ++
Sbjct: 3 KYRLLDGSMSEQLKQFGYNCNDINNKPHWT--FPANSDQSLMEKVYRSFLDIGVNNITTN 60
Query: 63 CYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAA 122
Y L K ++E L K + + + NL + ++ ++
Sbjct: 61 TYHFG-SILDKNLSGQEEKCKLYEKYFE--------DTCSLLCNLAQQYD----DVQVWG 107
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV--RAGVDYLALETIPAEKEA 180
S+G + T D SEY+G Y+D+ + + + L R + L ETIP++ E
Sbjct: 108 SVGTFATKFHDCSEYNGKYMDNAGAEESAYEYYKTILTLFQERTTIRNLIFETIPSQLEG 167
Query: 181 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 240
+K+L+EF KA +SF+ ++ HGE ++ L +QI +G+NC P +
Sbjct: 168 EVALKVLKEFKEMKAVISFTFMENACLRHGEHVADIAKK--LKESEQIIGMGINCTDPKN 225
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKG 264
V ++ IK + VYPN G
Sbjct: 226 VLPVLEAIKNCEFS-DIFVYPNLG 248
>gi|308489760|ref|XP_003107073.1| hypothetical protein CRE_17193 [Caenorhabditis remanei]
gi|308252961|gb|EFO96913.1| hypothetical protein CRE_17193 [Caenorhabditis remanei]
Length = 302
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 99/204 (48%), Gaps = 8/204 (3%)
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV--RAGVDYLALETIPAEKE 435
S+G T+ D SEY+G Y+D+ + + + L + V L ETIP E
Sbjct: 105 GSVGTLATLYHDMSEYNGKYMDNEDAENTARNYYQTILTLFQTKTKVRNLVFETIPLAVE 164
Query: 436 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
L ++ L+ FP +A +SF+ K++ HGE I + L QI +G+NC P
Sbjct: 165 GLMALEALKRFPEMRAVMSFTFKENACLRHGEEIDTLAGE--LRKCSQIVGMGINCTDPE 222
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
+V ++ IK+ H + VYPN G DS + E + + V W+E G IG
Sbjct: 223 NVLPALKVIKK-HNFPEVFVYPNMG---DSKFLNEGSDESDVFNIDMVTGWVENGATAIG 278
Query: 556 GCCEVTSYEIQQMRIMIDEFNTKK 579
GCC VT +++ ++ ++D N K
Sbjct: 279 GCCGVTEAQMKILKKIVDNLNNAK 302
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 112/263 (42%), Gaps = 23/263 (8%)
Query: 7 VKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACV-ETHRDFIRAGADIIQSSC 63
V+LLDGS ++Q+ + + P W+ + E+ V ++ F+ G I ++
Sbjct: 2 VRLLDGSMSAQLKHFGYDCNSAENIPHWT--FPANSDESLVANAYKSFLDLGVTDITTNT 59
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
Y L K + K ++ S+ K + D + S
Sbjct: 60 YHFG-STLDKRIPENDSKKKIYEKYFKIACSSLVKLTEMKD------------GVRVWGS 106
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV--RAGVDYLALETIPAEKEAL 181
+G T+ D SEY+G Y+D+ + + + L + V L ETIP E L
Sbjct: 107 VGTLATLYHDMSEYNGKYMDNEDAENTARNYYQTILTLFQTKTKVRNLVFETIPLAVEGL 166
Query: 182 ALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 241
++ L+ FP +A +SF+ K++ HGE I + L QI +G+NC P +V
Sbjct: 167 MALEALKRFPEMRAVMSFTFKENACLRHGEEIDTLAGE--LRKCSQIVGMGINCTDPENV 224
Query: 242 STLVRCIKQSHPTVQTIVYPNKG 264
++ IK+ H + VYPN G
Sbjct: 225 LPALKVIKK-HNFPEVFVYPNMG 246
>gi|260951339|ref|XP_002619966.1| hypothetical protein CLUG_01125 [Clavispora lusitaniae ATCC 42720]
gi|238847538|gb|EEQ37002.1| hypothetical protein CLUG_01125 [Clavispora lusitaniae ATCC 42720]
Length = 329
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 122/281 (43%), Gaps = 32/281 (11%)
Query: 7 VKLLDGSFTSQVSRHTIKD----VDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSS 62
V + DG+ +Q+ D V G PLWS+ L PE H+ ++ AGAD+I ++
Sbjct: 11 VLVQDGALGTQLEALIPLDDPHSVKGSPLWSTNALLYSPELISSIHKQYVEAGADMIITA 70
Query: 63 CYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAA 122
YQA+ L+K E +DL AK ++ + L T I
Sbjct: 71 TYQASPQTLSKY-----ENMDLAQ--------AKKVWTKSVECALEATRTHPEKKIFIGG 117
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEAL 181
SIGPYG L +G+EYSG Y D ++ L+ +HR V VD +A ET+P E
Sbjct: 118 SIGPYGAYLANGAEYSGDYGD-ISSDQLMDYHRDIVRFYAETKEVDVIAFETVPNFAEVQ 176
Query: 182 ALVKLLREFPG----QKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ----AIGV 233
A+ L+ + ++ ++S SCKD H G + + L QI IG
Sbjct: 177 AIFSLIEQMFNANLHKEFYVSLSCKDADHLVDGTPLEQVIRYILSKKSSQISDNLVGIGC 236
Query: 234 NCVRPSHVSTLVR-----CIKQSHPTVQTIVYPNKGVKLLD 269
NCV VS + C + +VYPN G + D
Sbjct: 237 NCVPFEIVSDFIETVNRVCQNNGSEQLSLLVYPNLGFEPTD 277
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 143/335 (42%), Gaps = 34/335 (10%)
Query: 263 KGVKLLDGSFTSQVSRHTIKD----VDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
K V + DG+ +Q+ D V G PLWS+ L PE H+ ++ E A
Sbjct: 9 KSVLVQDGALGTQLEALIPLDDPHSVKGSPLWSTNALLYSPELISSIHKQYV----EAGA 64
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAA 378
+ T S + + +A + W + +VE + A + P
Sbjct: 65 DMIITATYQASPQTLSKYENMDLAQAKKV-WTK-SVECALEATRTH-----PEKKIFIGG 117
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEAL 437
SIGPYG L +G+EYSG Y D ++ L+ +HR V VD +A ET+P E
Sbjct: 118 SIGPYGAYLANGAEYSGDYGD-ISSDQLMDYHRDIVRFYAETKEVDVIAFETVPNFAEVQ 176
Query: 438 ALVKLLREFPG----QKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ----AIGV 489
A+ L+ + ++ ++S SCKD H G + + L QI IG
Sbjct: 177 AIFSLIEQMFNANLHKEFYVSLSCKDADHLVDGTPLEQVIRYILSKKSSQISDNLVGIGC 236
Query: 490 NCVRPSHVSTLVR-----CIKQSHPTVQTIVYPNKG-GVWDSVHMKWLDTEDEYSILHYV 543
NCV VS + C + +VYPN G D+ + + + ++++ V
Sbjct: 237 NCVPFEIVSDFIETVNRVCQNNGSEQLSLLVYPNLGFEPTDTANYAFRSSTEKWA--SSV 294
Query: 544 PQW-LEEGVNIIGGCCEVTSYEIQQMRIMIDEFNT 577
+W L V +IGGCC EI Q++ ++++ +
Sbjct: 295 AKWALYSNVRVIGGCCSTGPAEIAQIKDVVEKIKS 329
>gi|411003103|ref|ZP_11379432.1| homocysteine methyltransferase [Streptomyces globisporus C-1027]
Length = 319
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 122/256 (47%), Gaps = 19/256 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG ++Q+ D LWS+ L PE H ++RAGA ++ ++ YQA
Sbjct: 19 LLDGGLSNQLESQGCDLTDA--LWSARLLADAPEQIEAAHLAYLRAGARVLITASYQATF 76
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ + G LL +SV+L A D + +T+ AAS+GPYG
Sbjct: 77 EGFGRYGLDRSRTEALLARSVELARGAADAARRA--GPGRETW--------VAASVGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
+L DGSEY G Y ++ +L +HRP V AL A D LALET+P EA ALV++
Sbjct: 127 AMLADGSEYRGRY--GLSVGELERFHRPRVAALAAARPDALALETVPDLDEAEALVRVAE 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E G WLS+S T G+ + A + A + + A+GVNC P V +
Sbjct: 185 ET-GLPYWLSYSVAGG-RTRAGQPLEEAF--AVAAGREAVVAVGVNCCDPDETQEAVE-L 239
Query: 249 KQSHPTVQTIVYPNKG 264
+ +VYPN G
Sbjct: 240 AVAVTGRPAVVYPNSG 255
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 137/311 (44%), Gaps = 27/311 (8%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
+ G LLDG ++Q+ D LWS+ L PE H ++R +
Sbjct: 14 DAGPVLLDGGLSNQLESQGCDLTDA--LWSARLLADAPEQIEAAHLAYLRAGARVLITAS 71
Query: 322 PYGTVLRDGSEYSGHYV--DSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAAS 379
T E G Y S TEA L +VE L R D P + AAS
Sbjct: 72 YQATF-----EGFGRYGLDRSRTEALLAR----SVE-LARGAADAARRAGPGRETWVAAS 121
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
+GPYG +L DGSEY G Y ++ +L +HRP V AL A D LALET+P EA AL
Sbjct: 122 VGPYGAMLADGSEYRGRY--GLSVGELERFHRPRVAALAAARPDALALETVPDLDEAEAL 179
Query: 440 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
V++ E G WLS+S T G+ + A + A + + A+GVNC P
Sbjct: 180 VRVAEET-GLPYWLSYSVAGG-RTRAGQPLEEAF--AVAAGREAVVAVGVNCCDPDETQE 235
Query: 500 LVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW--LDTEDEYSILHYVPQWLEEGVNIIGGC 557
V + + +VYPN G WD+ +W + T D V W G ++GGC
Sbjct: 236 AVE-LAVAVTGRPAVVYPNSGEGWDAGAREWTGVGTFDP----GRVRAWTRAGARLVGGC 290
Query: 558 CEVTSYEIQQM 568
C V I ++
Sbjct: 291 CRVGPDLIAEL 301
>gi|365863599|ref|ZP_09403309.1| homocysteine methyltransferase [Streptomyces sp. W007]
gi|364006959|gb|EHM27989.1| homocysteine methyltransferase [Streptomyces sp. W007]
Length = 309
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 122/258 (47%), Gaps = 23/258 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG ++Q+ D LWS+ L PE H ++RAGA ++ ++ YQA
Sbjct: 17 LLDGGLSNQLEAQGCDLSDA--LWSARLLADAPEQIEAAHLAYLRAGARVLITASYQATF 74
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ + G LL +SV+L A + + +T+ AAS+GPYG
Sbjct: 75 EGFGRYGLDRAGTEALLARSVELARGAAEAARRA--GPGRETW--------VAASVGPYG 124
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
+L DGSEY G Y S+ E L +HRP V AL AG D LALET+P EA ALV++
Sbjct: 125 AMLADGSEYRGRYGLSVRE--LEHFHRPRVAALAAAGPDALALETVPDLDEAEALVRVAE 182
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR-- 246
E G WLS+S T G+ + A + A D + A+GVNC P V
Sbjct: 183 ET-GVPYWLSYSVAGG-RTRAGQPLEEAFA--VAAGRDSVLAVGVNCCDPEEAQGAVEQA 238
Query: 247 CIKQSHPTVQTIVYPNKG 264
P V VYPN G
Sbjct: 239 VAVTGRPAV---VYPNSG 253
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 137/312 (43%), Gaps = 29/312 (9%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIE---TAA 318
+ G LLDG ++Q+ D LWS+ L PE H ++R TA+
Sbjct: 12 DAGPVLLDGGLSNQLEAQGCDLSDA--LWSARLLADAPEQIEAAHLAYLRAGARVLITAS 69
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAA 378
+ R G + +G TEA L +VE L R + P + AA
Sbjct: 70 YQATFEGFGRYGLDRAG------TEALLAR----SVE-LARGAAEAARRAGPGRETWVAA 118
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+GPYG +L DGSEY G Y S+ E L +HRP V AL AG D LALET+P EA A
Sbjct: 119 SVGPYGAMLADGSEYRGRYGLSVRE--LEHFHRPRVAALAAAGPDALALETVPDLDEAEA 176
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
LV++ E G WLS+S T G+ + A + A D + A+GVNC P
Sbjct: 177 LVRVAEET-GVPYWLSYSVAGG-RTRAGQPLEEAFA--VAAGRDSVLAVGVNCCDPEEAQ 232
Query: 499 TLVR--CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556
V P V VYPN G WD+ W T V W G ++GG
Sbjct: 233 GAVEQAVAVTGRPAV---VYPNSGEGWDAAARGW--TGRGTFDPGRVRAWTRAGARLVGG 287
Query: 557 CCEVTSYEIQQM 568
CC V I ++
Sbjct: 288 CCRVGPDLITEL 299
>gi|319942566|ref|ZP_08016875.1| homocysteine S-methyltransferase [Sutterella wadsworthensis
3_1_45B]
gi|319803862|gb|EFW00784.1| homocysteine S-methyltransferase [Sutterella wadsworthensis
3_1_45B]
Length = 318
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 146/326 (44%), Gaps = 23/326 (7%)
Query: 251 SHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFI 310
HP I +G ++DG+ ++ + + D LWS+ L P+ + H D+
Sbjct: 5 KHPIADLIA--RRGGLVIDGAMSTPLEAAGLNLND--TLWSAKALLECPDLVRKVHYDYY 60
Query: 311 RGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKP 370
+ T + ++ ++ + LI R + E LVR + + L P
Sbjct: 61 AAGANAVEACSYQAT----EAAFARKGIEKAEASRLI---RLSGE-LVREAKNDVLLEHP 112
Query: 371 SISSQ---TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
TA SIGPYG L DGSEY+G Y +T + A+H+ ++ L+ +G+D LA+
Sbjct: 113 EWDPADLLTAGSIGPYGAYLADGSEYTGAY--DLTREEYYAFHQLRLDELLNSGMDILAI 170
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET P E AL+ ++ + W++ + KD +L + CL A+P ++A
Sbjct: 171 ETQPRFDEIEALLAMIADR-DITCWVTVTLKDGDMPDGTKL--EVLAKCLDADP-HVEAF 226
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQW 546
G NCV+ V ++ + ++ +VYPN G +D W E HYVP W
Sbjct: 227 GFNCVKREWVEPGLKRL-SAYTDKPLVVYPNSGETYDPTTKTWHAQGVHEPDWNHYVPLW 285
Query: 547 LEEGVNIIGGCCEVTSYEIQQMRIMI 572
G IGGCC +I Q+ ++
Sbjct: 286 EHTGARCIGGCCRTLPKDIVQIADLL 311
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 128/256 (50%), Gaps = 16/256 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG+ ++ + + D LWS+ L P+ + H D+ AGA+ +++ YQA
Sbjct: 19 VIDGAMSTPLEAAGLNLND--TLWSAKALLECPDLVRKVHYDYYAAGANAVEACSYQATE 76
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G + EA L+ S +L+ AK+ D+ L + TA SIGPYG
Sbjct: 77 AAFARKGIEKAEASRLIRLSGELVREAKN------DVLLEHP-EWDPADLLTAGSIGPYG 129
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY+G Y +T + A+H+ ++ L+ +G+D LA+ET P E AL+ ++
Sbjct: 130 AYLADGSEYTGAY--DLTREEYYAFHQLRLDELLNSGMDILAIETQPRFDEIEALLAMIA 187
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
+ W++ + KD +L + CL A+P ++A G NCV+ V ++ +
Sbjct: 188 DR-DITCWVTVTLKDGDMPDGTKL--EVLAKCLDADP-HVEAFGFNCVKREWVEPGLKRL 243
Query: 249 KQSHPTVQTIVYPNKG 264
++ +VYPN G
Sbjct: 244 -SAYTDKPLVVYPNSG 258
>gi|320583897|gb|EFW98110.1| S-adenosylmethionine-homocysteine methyltransferase [Ogataea
parapolymorpha DL-1]
Length = 301
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 153/319 (47%), Gaps = 35/319 (10%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
LLDG+ +++ + + DV G LWS + + H D++R + A+I T
Sbjct: 3 LLDGALGTELEKRGV-DVSG-GLWSGRAVLDSADTVKAIHLDYMR----SGANIVLTATY 56
Query: 327 -LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGT 385
L D + H D A + V +A +Y + + A SIGPYG
Sbjct: 57 QLCDANIEQNH-------QDPHAVYTRAVGLCAQARREY----EDGAGVKIAGSIGPYGA 105
Query: 386 VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEALALVKLLR 444
L DGSEY+G+Y S+T+A L A+H L ++ VD LA ETIP+ +E L +L R
Sbjct: 106 YLADGSEYTGNY-GSVTDAQLRAFHEGRFRFLAQSSDVDVLAFETIPSFQEIRVLAELAR 164
Query: 445 EFPGQKAW-LSFSCKDDTHTSHGELISSAVTSCLLANPDQ-IQAIGVNC----VRPSHVS 498
+K W LS S ++ L + V S L ++ D+ I A+GVNC V V
Sbjct: 165 --TQEKPWYLSLSVRETALVDGTPL--AQVVSWLDSHYDRNIVAVGVNCCGVRVALPVVE 220
Query: 499 TLVRCIKQSH--PTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLE-EGVNIIG 555
L R + S + ++YPN G V+D KW + + + V Q L+ + V I+G
Sbjct: 221 ELDRRLSDSQNLRNARIVLYPNSGEVYDGTTKKW--SGEPSHFVEAVKQCLQYKRVGIVG 278
Query: 556 GCCEVTSYEIQQMRIMIDE 574
GCC +I+Q+R +IDE
Sbjct: 279 GCCRTGPADIRQLRTLIDE 297
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 135/272 (49%), Gaps = 33/272 (12%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ + + DV G LWS + + H D++R+GA+I+ ++ YQ
Sbjct: 3 LLDGALGTELEKRGV-DVSG-GLWSGRAVLDSADTVKAIHLDYMRSGANIVLTATYQLCD 60
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
N+ + + Q+ + ++V L A+ + + + A SIGPYG
Sbjct: 61 ANIEQ---NHQDPHAVYTRAVGLCAQARREYEDGAGVKI-------------AGSIGPYG 104
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEALALVKLL 187
L DGSEY+G+Y S+T+A L A+H L ++ VD LA ETIP+ +E L +L
Sbjct: 105 AYLADGSEYTGNY-GSVTDAQLRAFHEGRFRFLAQSSDVDVLAFETIPSFQEIRVLAELA 163
Query: 188 REFPGQKAW-LSFSCKDDTHTSHGELISSAVTSCLLANPDQ-IQAIGVNC----VRPSHV 241
R +K W LS S ++ L + V S L ++ D+ I A+GVNC V V
Sbjct: 164 R--TQEKPWYLSLSVRETALVDGTPL--AQVVSWLDSHYDRNIVAVGVNCCGVRVALPVV 219
Query: 242 STLVRCIKQSH--PTVQTIVYPNKGVKLLDGS 271
L R + S + ++YPN G ++ DG+
Sbjct: 220 EELDRRLSDSQNLRNARIVLYPNSG-EVYDGT 250
>gi|414868889|tpg|DAA47446.1| TPA: hypothetical protein ZEAMMB73_192064 [Zea mays]
Length = 249
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 29/198 (14%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +++ + D PLWS+ L + P + H D++ AGA+II ++ YQA +
Sbjct: 25 VLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATI 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK------ENQTPDINLNKTFNLLTGHIETAA 122
G+S++++ +LL KSV++ A++ E TP + + AA
Sbjct: 83 QGFESKGFSKEQSENLLTKSVEIALEAREMFLKEHLEKSTP----------IQHPVLVAA 132
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA-- 180
S+G YG L DGSEYSG Y ++ T+ L +HR ++ L AG D +A ETIP + EA
Sbjct: 133 SLGSYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAEV 192
Query: 181 ---------LALVKLLRE 189
LA + +LR+
Sbjct: 193 YYFAIRVFCLAFLSILRK 210
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G +LDG +++ + D PLWS+ L + P + H D++ +
Sbjct: 22 GRLVLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQ 79
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT------- 376
T+ G E G + +E L +VE + A +L K + T
Sbjct: 80 ATI--QGFESKG-FSKEQSENLLT----KSVEIALEAREMFL---KEHLEKSTPIQHPVL 129
Query: 377 -AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
AAS+G YG L DGSEYSG Y ++ T+ L +HR ++ L AG D +A ETIP + E
Sbjct: 130 VAASLGSYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLE 189
Query: 436 A-----------LALVKLLRE 445
A LA + +LR+
Sbjct: 190 AEVYYFAIRVFCLAFLSILRK 210
>gi|255727863|ref|XP_002548857.1| hypothetical protein CTRG_03154 [Candida tropicalis MYA-3404]
gi|240133173|gb|EER32729.1| hypothetical protein CTRG_03154 [Candida tropicalis MYA-3404]
Length = 312
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 114/236 (48%), Gaps = 21/236 (8%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKL-GYSEQEALDLLHKSV 89
LWS L PE + H D+I AGADII +S YQ + +L K GY +++++L + ++
Sbjct: 40 LWSGQALINNPELVEQVHLDYINAGADIIITSTYQTSYASLNKYAGYDMKKSVELWNSAL 99
Query: 90 QLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD 149
+A ++ ++ I A SIGPY TVL +GSEYSG Y T D
Sbjct: 100 GAAKNAVNRSGRSDVI--------------IAGSIGPYATVLANGSEYSGDY-QGATYDD 144
Query: 150 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSH 209
L+ +H P E + VD + +ETIP E ++ +++++ ++ +++ + + S
Sbjct: 145 LVEYHTPLFEFYDNSDVDVICIETIPNFTELKVVIDMMKKYTKKEYFIAVNPQTANALSD 204
Query: 210 GELISS-AVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
G + A + + + +G+NC LV I + ++YPN G
Sbjct: 205 GTTLDKVAEVFKTIEDTSRFLGVGINCTNYD----LVNDILKYFTDFPVLIYPNMG 256
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 127/283 (44%), Gaps = 25/283 (8%)
Query: 289 LWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA 348
LWS L PE + H D+I + + Y T ++Y+G+ + E
Sbjct: 40 LWSGQALINNPELVEQVHLDYINAGADIIIT-STYQTSYASLNKYAGYDMKKSVEL---- 94
Query: 349 WHRP---NVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEAD 405
W+ A+ R+G + + A SIGPY TVL +GSEYSG Y T D
Sbjct: 95 WNSALGAAKNAVNRSGRSDVII---------AGSIGPYATVLANGSEYSGDY-QGATYDD 144
Query: 406 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSH 465
L+ +H P E + VD + +ETIP E ++ +++++ ++ +++ + + S
Sbjct: 145 LVEYHTPLFEFYDNSDVDVICIETIPNFTELKVVIDMMKKYTKKEYFIAVNPQTANALSD 204
Query: 466 GELISS-AVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWD 524
G + A + + + +G+NC LV I + ++YPN G V+D
Sbjct: 205 GTTLDKVAEVFKTIEDTSRFLGVGINCTNYD----LVNDILKYFTDFPVLIYPNMGFVYD 260
Query: 525 SVHMKWL-DTEDEYSILHYVPQWLE-EGVNIIGGCCEVTSYEI 565
+ K++ + E S + V +WL + V +GGCC EI
Sbjct: 261 TETHKFVPEANHELSWENAVKKWLNSDNVRAVGGCCSTGPSEI 303
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFI-RGHIETAA 318
Y N G ++ S T Q S ++ G+ + SV L + + R + A
Sbjct: 60 YINAGADIIITS-TYQTSYASLNKYAGYDMKKSVELWNSALGAAKNAVNRSGRSDVIIAG 118
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
SIGPY TVL +GSEYSG Y T DL+ +H P E + VD + +
Sbjct: 119 SIGPYATVLANGSEYSGDY-QGATYDDLVEYHTPLFEFYDNSDVDVICI 166
>gi|392925312|ref|NP_508223.2| Protein T13G4.4 [Caenorhabditis elegans]
gi|373219366|emb|CCD67540.1| Protein T13G4.4 [Caenorhabditis elegans]
Length = 304
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 145/325 (44%), Gaps = 34/325 (10%)
Query: 265 VKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS-IG 321
V+LLDGS +SQ+ R + + P WS + E ++ F+ ++ S
Sbjct: 2 VRLLDGSMSSQLLRFGYDCNQQENKPHWS-FPANADMELMENVYKSFLDLEVKVITSNTY 60
Query: 322 PYGTVLR----DGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA 377
+G+ L + +E Y E L H L S +
Sbjct: 61 HFGSTLDKTIPENAEKRELYEKYFEETCLKLCH----------------LTTGSSDVEAW 104
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV---RAGVDYLALETIPAEK 434
S+G T+ D SEY+G Y+D +EA A+ + + R+ + L ETIP+
Sbjct: 105 GSVGTLATMYHDLSEYTGAYMDQ-SEAKKTAYDYFKIILTLFHNRSSIRKLIFETIPSAD 163
Query: 435 EALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
E + +L+EFP +A +SF+ K+ HGE I+S + Q+ IG+NC P
Sbjct: 164 EGSVALDVLQEFPEFEAVISFTFKEHGCLRHGEKITSVAQQ--MKQSPQVLGIGINCTDP 221
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554
++V + + Q + VYPNKG DS ++ E V W+E+GV I
Sbjct: 222 NNVLPALNEL-QPFAFSEVFVYPNKG---DSKFLEEGIDESNVFTKTLVTSWIEKGVTAI 277
Query: 555 GGCCEVTSYEIQQMRIMIDEFNTKK 579
GGCC VT+ +I+ ++ ++ + NT +
Sbjct: 278 GGCCGVTNDQIKVLKPLLGKINTNQ 302
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 116/265 (43%), Gaps = 27/265 (10%)
Query: 7 VKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
V+LLDGS +SQ+ R + + P WS + E ++ F+ +I S+ Y
Sbjct: 2 VRLLDGSMSSQLLRFGYDCNQQENKPHWS-FPANADMELMENVYKSFLDLEVKVITSNTY 60
Query: 65 QANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH--IETAA 122
L K E +L K + K +L TG +E
Sbjct: 61 HFG-STLDKTIPENAEKRELYEKYFEE--------------TCLKLCHLTTGSSDVEAWG 105
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV---RAGVDYLALETIPAEKE 179
S+G T+ D SEY+G Y+D +EA A+ + + R+ + L ETIP+ E
Sbjct: 106 SVGTLATMYHDLSEYTGAYMDQ-SEAKKTAYDYFKIILTLFHNRSSIRKLIFETIPSADE 164
Query: 180 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 239
+ +L+EFP +A +SF+ K+ HGE I+S + Q+ IG+NC P+
Sbjct: 165 GSVALDVLQEFPEFEAVISFTFKEHGCLRHGEKITSVAQQ--MKQSPQVLGIGINCTDPN 222
Query: 240 HVSTLVRCIKQSHPTVQTIVYPNKG 264
+V + + Q + VYPNKG
Sbjct: 223 NVLPALNEL-QPFAFSEVFVYPNKG 246
>gi|379735840|ref|YP_005329346.1| Homocysteine S-methyltransferase [Blastococcus saxobsidens DD2]
gi|378783647|emb|CCG03315.1| Homocysteine S-methyltransferase [Blastococcus saxobsidens DD2]
Length = 302
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 100/205 (48%), Gaps = 21/205 (10%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S+GPYG +L DGSEY+G YV M A L A+HRP +E L +AG D LA ET+PA EA
Sbjct: 109 AGSVGPYGAMLADGSEYTGGYVAEMDVAALCAFHRPRMELLAQAGADVLACETVPAAAEA 168
Query: 437 LALVKLLREFPGQKAWLSFSCKDD----THTSHGELISSAVTSCLLANPDQIQAIGVNCV 492
AL+ +E G WLS + D T GEL + ++ A+GVNC
Sbjct: 169 EALLLAAQEL-GVPVWLSLTTVVDAAGVARTRRGELAADVFAMAADVA--EVVAVGVNCT 225
Query: 493 RPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-----LDTEDEYSILHYVPQWL 547
P V V S V + YPN G WD+ +W + +D + W
Sbjct: 226 APDAVRPAVLAAGTSGKPV--VAYPNSGETWDAGARRWAGPPGVAADDAVA-------WT 276
Query: 548 EEGVNIIGGCCEVTSYEIQQMRIMI 572
G ++GGCC V +I + +MI
Sbjct: 277 TAGARLVGGCCRVRPADIAAITMMI 301
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 123/260 (47%), Gaps = 30/260 (11%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG ++++ DV LWS+ L +P A V H F AGA + ++ YQA V
Sbjct: 18 VLDGGLSTELESRG-HDVS-SALWSARLLRDDPAAIVSAHAAFAAAGAQVATTASYQATV 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ +G A L+ SV L A+D + TG + A S+GPYG
Sbjct: 76 EGFAAVGVDADVARRLIASSVAL---ARDGQG--------------TGWV--AGSVGPYG 116
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
+L DGSEY+G YV M A L A+HRP +E L +AG D LA ET+PA EA AL+ +
Sbjct: 117 AMLADGSEYTGGYVAEMDVAALCAFHRPRMELLAQAGADVLACETVPAAAEAEALLLAAQ 176
Query: 189 EFPGQKAWLSFSCKDD----THTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
E G WLS + D T GEL + ++ A+GVNC P V
Sbjct: 177 EL-GVPVWLSLTTVVDAAGVARTRRGELAADVFAMAADVA--EVVAVGVNCTAPDAVRPA 233
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
V S V + YPN G
Sbjct: 234 VLAAGTSGKPV--VAYPNSG 251
>gi|150864416|ref|XP_001383215.2| AdoMet-homocysteine methyltransferase [Scheffersomyces stipitis CBS
6054]
gi|149385672|gb|ABN65186.2| AdoMet-homocysteine methyltransferase [Scheffersomyces stipitis CBS
6054]
Length = 337
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 159/337 (47%), Gaps = 36/337 (10%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVD----GHPLWSSVYLTTEPEACVETHRDFIRGHIETA 317
+K +LDG+ +++ KD HPLWS + L EP H +++ A
Sbjct: 9 SKNRLVLDGAMGTELEACIPKDSKIQPRKHPLWSGLVLLNEPNLIKNVHYNYLEQADVDA 68
Query: 318 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA 377
Y E++ + + + + +++ + A + Y + K S S +
Sbjct: 69 LISSTYQISYPSLKEHT-----DLDDEQIRGIWKKSIDVVEDAILQYRS--KNSNSKKKI 121
Query: 378 ---ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAE 433
SIGPY T L DGSEY+G Y ++ +++D+ ++H+P +E + VD + ETIP+
Sbjct: 122 YIIGSIGPYATYLADGSEYTGDYKNA-SDSDIESYHQPLLEYFLGDDRVDTIGFETIPSF 180
Query: 434 KEALALVKLLREFPGQKA-----WLSFSCKDDTHT--SHGELISSAVTSCLLANP---DQ 483
+E ++KLL ++ ++SF+ + T T + E++ S + S L P
Sbjct: 181 QEVKVVLKLLSHLFAEQEKRKYYYISFNFDEATITDGTPTEVVISYIDSFLDKYPFLRKY 240
Query: 484 IQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYV 543
+ +G+NC+ + ++V I S + Q ++P V+ + +K++ ED+Y +
Sbjct: 241 MVGLGLNCIDYHKIGSIVAKINDSQTSAQKPLFP--LIVYPNFTIKYVPEEDDYRAYKDI 298
Query: 544 PQWLE--------EGVNIIGGCCEVTSYEIQQMRIMI 572
+W E V +IGGCC + EI+++R +I
Sbjct: 299 EKWKELVSEWVTIPNVRMIGGCCSTSPKEIKEVRRII 335
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 139/280 (49%), Gaps = 31/280 (11%)
Query: 9 LLDGSFTSQVSRHTIKDVD----GHPLWSSVYLTTEPEACVETHRDFI-RAGADIIQSSC 63
+LDG+ +++ KD HPLWS + L EP H +++ +A D + SS
Sbjct: 14 VLDGAMGTELEACIPKDSKIQPRKHPLWSGLVLLNEPNLIKNVHYNYLEQADVDALISST 73
Query: 64 YQANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAA 122
YQ + +L + +++ + KS+ ++ A + ++ + N K ++
Sbjct: 74 YQISYPSLKEHTDLDDEQIRGIWKKSIDVVEDAI-LQYRSKNSNSKKKIYII-------G 125
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEAL 181
SIGPY T L DGSEY+G Y ++ +++D+ ++H+P +E + VD + ETIP+ +E
Sbjct: 126 SIGPYATYLADGSEYTGDYKNA-SDSDIESYHQPLLEYFLGDDRVDTIGFETIPSFQEVK 184
Query: 182 ALVKLLREFPGQKA-----WLSFSCKDDTHT--SHGELISSAVTSCLLANP---DQIQAI 231
++KLL ++ ++SF+ + T T + E++ S + S L P + +
Sbjct: 185 VVLKLLSHLFAEQEKRKYYYISFNFDEATITDGTPTEVVISYIDSFLDKYPFLRKYMVGL 244
Query: 232 GVNCVRPSHVSTLVRCIKQSHPTVQT-----IVYPNKGVK 266
G+NC+ + ++V I S + Q IVYPN +K
Sbjct: 245 GLNCIDYHKIGSIVAKINDSQTSAQKPLFPLIVYPNFTIK 284
>gi|375152036|gb|AFA36476.1| homocysteine S-methyltransferase-3, partial [Lolium perenne]
Length = 191
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 12/188 (6%)
Query: 394 SGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFP-GQKAW 452
SG Y ++ T L +HR ++ L A D +A ETIP + EA A V+LL E +W
Sbjct: 1 SGDYGEAGTLEFLKDFHRRRLQVLAEARPDLIAFETIPNKLEAQAYVELLEECNISIPSW 60
Query: 453 LSFSCKDDTHTSHGE-LISSA--VTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHP 509
SF+ KD H G+ LI A SC ++ AIG+NC P + +L+ I++
Sbjct: 61 FSFNSKDGVHVVSGDSLIECAKVANSCA-----KVGAIGINCTPPRFIHSLILTIRKVTD 115
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTE--DEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQ 567
++YPN G +D+ +W+++ + + YV +W ++G +IGGCC T I+
Sbjct: 116 K-PILIYPNSGERYDAEKKEWVESTGVSDGDFVSYVSEWCKDGAALIGGCCRTTPNTIRA 174
Query: 568 MRIMIDEF 575
+ +++F
Sbjct: 175 ITRTLNQF 182
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 23/157 (14%)
Query: 138 SGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFP-GQKAW 196
SG Y ++ T L +HR ++ L A D +A ETIP + EA A V+LL E +W
Sbjct: 1 SGDYGEAGTLEFLKDFHRRRLQVLAEARPDLIAFETIPNKLEAQAYVELLEECNISIPSW 60
Query: 197 LSFSCKDDTHTSHGE-LISSA--VTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHP 253
SF+ KD H G+ LI A SC ++ AIG+NC P + +L+ I++
Sbjct: 61 FSFNSKDGVHVVSGDSLIECAKVANSCA-----KVGAIGINCTPPRFIHSLILTIRKVTD 115
Query: 254 TVQTIVYPNKGVK-------------LLDGSFTSQVS 277
++YPN G + + DG F S VS
Sbjct: 116 K-PILIYPNSGERYDAEKKEWVESTGVSDGDFVSYVS 151
>gi|290983000|ref|XP_002674217.1| homocysteine S-methyltransferase [Naegleria gruberi]
gi|284087806|gb|EFC41473.1| homocysteine S-methyltransferase [Naegleria gruberi]
Length = 342
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 141/332 (42%), Gaps = 59/332 (17%)
Query: 289 LWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA 348
LW + YL P+A + H D++ + + Y + ++G + +V SM E + I
Sbjct: 12 LWGANYLLENPKAIAKVHSDYVHEGLCDICTSSSY-QISQEG--LAADHV-SMKEEERIE 67
Query: 349 ----WHRPNV----------EALVRAGVDYLALIKPSISSQTAASIGPYGTVL-RDGSEY 393
R +V E LV A V + SIS+ + +G L D
Sbjct: 68 LASRMFRDSVQIARKVVREKEKLVAASV---SCFGASISNLLGEAKEYFGDYLDEDADSN 124
Query: 394 SGHYV----------------DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
SGHYV S E + +H P V L+ A D++ LET+P KE
Sbjct: 125 SGHYVHKFVKQLSEKLGETLEKSGMEQVIYDFHYPRVRELILAEPDFILLETMPVLKEVE 184
Query: 438 ALVK-----LLREF--PGQKAWLSFSCKDDTHTSHGELISSAV--TSCLLANPD--QIQA 486
L +L+E G K +SF CKD HT HGE I V + NP +I A
Sbjct: 185 ILCDRVIPDILKELNKKGIKVMISFYCKDGLHTGHGESIEKCVEYVNQDRFNPSLFEIFA 244
Query: 487 IGVNCVRPSHVSTLVRCI-KQSHPTVQTIVYPNKGGVWDSVHMKW------LDTEDEYSI 539
+G NC+ PS V L+ I + I+YPN G ++D++ W LD +
Sbjct: 245 VGANCISPSIVPILIENIHTHLRKDISIILYPNSGEIYDNLTKSWSIPQGGLDWLYDRDF 304
Query: 540 LHYVPQWLE---EGVNIIGGCCEVTSYEIQQM 568
+ ++ +W E E +IGGCC I+++
Sbjct: 305 IPFIKKWSENHPERKLVIGGCCRTNPRNIKKL 336
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 115/272 (42%), Gaps = 42/272 (15%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAG-ADIIQSSCYQANVDNLTK--LGYSEQEALDL--- 84
LW + YL P+A + H D++ G DI SS YQ + + L + E+E ++L
Sbjct: 12 LWGANYLLENPKAIAKVHSDYVHEGLCDICTSSSYQISQEGLAADHVSMKEEERIELASR 71
Query: 85 -LHKSVQLMNSA---KDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGH 140
SVQ+ K+K + + L G E G Y + D SGH
Sbjct: 72 MFRDSVQIARKVVREKEKLVAASVSCFGASISNLLG--EAKEYFGDY--LDEDADSNSGH 127
Query: 141 YV----------------DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
YV S E + +H P V L+ A D++ LET+P KE L
Sbjct: 128 YVHKFVKQLSEKLGETLEKSGMEQVIYDFHYPRVRELILAEPDFILLETMPVLKEVEILC 187
Query: 185 K-----LLREF--PGQKAWLSFSCKDDTHTSHGELISSAV--TSCLLANPD--QIQAIGV 233
+L+E G K +SF CKD HT HGE I V + NP +I A+G
Sbjct: 188 DRVIPDILKELNKKGIKVMISFYCKDGLHTGHGESIEKCVEYVNQDRFNPSLFEIFAVGA 247
Query: 234 NCVRPSHVSTLVRCI-KQSHPTVQTIVYPNKG 264
NC+ PS V L+ I + I+YPN G
Sbjct: 248 NCISPSIVPILIENIHTHLRKDISIILYPNSG 279
>gi|323358681|ref|YP_004225077.1| homocysteine/selenocysteine methylase [Microbacterium testaceum
StLB037]
gi|323275052|dbj|BAJ75197.1| homocysteine/selenocysteine methylase [Microbacterium testaceum
StLB037]
Length = 285
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 124/299 (41%), Gaps = 37/299 (12%)
Query: 261 PNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASI 320
P + V +LDG + + DV LWS+ L +P+ H FI E +
Sbjct: 9 PARAV-VLDGGLGTLLEARG-NDVSSS-LWSARILRDDPDEVRAAHAAFIDAGAEVVIT- 64
Query: 321 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASI 380
S Y + + +AD V+ L+R V L + + AAS+
Sbjct: 65 ----------SSYQVGFGVGIPDAD--------VDTLLRRSV---TLAREAGDVAVAASV 103
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
GP G + DGSEY+G Y +T L HR + L AG D LA+ETIPAE E AL
Sbjct: 104 GPMGALRADGSEYTGEY--GLTLEQLRDRHRRRLRVLADAGADLLAIETIPAELEVEAL- 160
Query: 441 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 500
L E G A S S S G L + T+ A+ + A+GVNC P V
Sbjct: 161 SLELEGLGIPALFSLSADSTGFASAGSLDRALRTA---ASAPGVIAVGVNCCAPETVLPA 217
Query: 501 VRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
+ P + + YPN G WD+ W + P W+ G ++GGCC
Sbjct: 218 L----AGAPGIPLVAYPNTGERWDATTRTWRGA--TAPLADAAPDWVAAGARLVGGCCR 270
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 112/260 (43%), Gaps = 36/260 (13%)
Query: 5 CKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
+ +LDG + + DV LWS+ L +P+ H FI AGA+++ +S Y
Sbjct: 10 ARAVVLDGGLGTLLEARG-NDVSSS-LWSARILRDDPDEVRAAHAAFIDAGAEVVITSSY 67
Query: 65 QANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
Q +G + + LL +SV L A D + AAS+
Sbjct: 68 QVGF----GVGIPDADVDTLLRRSVTLAREAGD--------------------VAVAASV 103
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GP G + DGSEY+G Y +T L HR + L AG D LA+ETIPAE E AL
Sbjct: 104 GPMGALRADGSEYTGEY--GLTLEQLRDRHRRRLRVLADAGADLLAIETIPAELEVEAL- 160
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
L E G A S S S G L + T+ A+ + A+GVNC P V
Sbjct: 161 SLELEGLGIPALFSLSADSTGFASAGSLDRALRTA---ASAPGVIAVGVNCCAPETVLPA 217
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
+ P + + YPN G
Sbjct: 218 L----AGAPGIPLVAYPNTG 233
>gi|393217074|gb|EJD02563.1| Homocysteine S-methyltransferase [Fomitiporia mediterranea MF3/22]
Length = 378
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 129/315 (40%), Gaps = 72/315 (22%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ LLDG F + + KD+ PLWS+ + EP+ ++ H +F+ AG+DII ++ YQ
Sbjct: 8 EILLLDGGFGTTLEDVFQKDIS-SPLWSASLVEKEPDVIIKAHSEFLNAGSDIILTATYQ 66
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
+ + GYS +A++L+ K+VQL A+D Q + S+G
Sbjct: 67 CSFKTFDRAGYSRPDAINLMRKTVQLATQARDLHQQRK-------------QAKVVLSLG 113
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL------------------------ 161
P+G L E+ G Y A + PN A
Sbjct: 114 PFGAALTTAQEFDGIYPPPYGPRAFSA-NGPNTNAFHTAVSEEAAILSLRNFHYDRLRVF 172
Query: 162 -------VRAGVDYLALETIPAEKEA----LALVKL---LREFPGQKA---WLSFSCKDD 204
V +D +A ETIP +E LA+ +L LRE+ GQ+ W+S
Sbjct: 173 AMKKDDEVWNLIDGIAFETIPLAREVKAIRLAMARLNARLREW-GQEEKPWWISTVWPSG 231
Query: 205 TH---TSHGELISSAVTSCLLANPDQI------QAIGVNCVRPSH----VSTLVRCIKQS 251
H + G+ +S + L PD +G+NC VS L R I +
Sbjct: 232 VHPQESGSGDRLSGKDVAEALLLPDSTGDLPVPSGVGINCTHIKDLDEVVSKLRRAIDEI 291
Query: 252 HPTVQT--IVYPNKG 264
P + ++YPN G
Sbjct: 292 KPNRKPSLVLYPNGG 306
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 139/381 (36%), Gaps = 97/381 (25%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG F + + KD+ PLWS+ + EP+ ++ H +F
Sbjct: 9 ILLLDGGFGTTLEDVFQKDIS-SPLWSASLVEKEPDVIIKAHSEF--------------- 52
Query: 325 TVLRDGSE--YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA----LIKPSISSQTAA 378
L GS+ + Y S D + RP+ L+R V L + ++
Sbjct: 53 --LNAGSDIILTATYQCSFKTFDRAGYSRPDAINLMRKTVQLATQARDLHQQRKQAKVVL 110
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL--------------------- 417
S+GP+G L E+ G Y A + PN A
Sbjct: 111 SLGPFGAALTTAQEFDGIYPPPYGPRAFSA-NGPNTNAFHTAVSEEAAILSLRNFHYDRL 169
Query: 418 ----------VRAGVDYLALETIPAEKEA----LALVKL---LREFPGQKA---WLSFSC 457
V +D +A ETIP +E LA+ +L LRE+ GQ+ W+S
Sbjct: 170 RVFAMKKDDEVWNLIDGIAFETIPLAREVKAIRLAMARLNARLREW-GQEEKPWWISTVW 228
Query: 458 KDDTH---TSHGELISSAVTSCLLANPDQI------QAIGVNCVRPSH----VSTLVRCI 504
H + G+ +S + L PD +G+NC VS L R I
Sbjct: 229 PSGVHPQESGSGDRLSGKDVAEALLLPDSTGDLPVPSGVGINCTHIKDLDEVVSKLRRAI 288
Query: 505 KQSHPTVQT--IVYPNKGGVWDSVHMKWLDTE-DEYSILHYVPQWLEE------------ 549
+ P + ++YPN GGV+D V W E +E + W +
Sbjct: 289 DEIKPNRKPSLVLYPNGGGVYDIVKRTWTKPEGEEVDTEEFHISWAQRLVSIAKREQETG 348
Query: 550 --GVNIIGGCCEVTSYEIQQM 568
G +IGGCC+ T I +
Sbjct: 349 SWGGTVIGGCCKTTPAHINLL 369
>gi|406605911|emb|CCH42688.1| Homocysteine S-methyltransferase 2 [Wickerhamomyces ciferrii]
Length = 301
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 107/195 (54%), Gaps = 10/195 (5%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKE 435
SIGPYG L +G+EY+G Y D + ++L+ +H+ +E L + VD + LET+P E
Sbjct: 105 VGSIGPYGASLANGAEYTGDYGD-IKSSNLVEFHKERLEMLCKDNRVDLIGLETMPNINE 163
Query: 436 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
L++L++ + + +LS S DT + G + S + + NP ++ AIGVNC+
Sbjct: 164 IKILIELMQGYD-KDYYLSLSINGDT-LADGTKVES-LKELVDGNP-KLLAIGVNCLPLK 219
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLE--EGVNI 553
T + ++ + IVYPN G V+D+V+ KW + + + Q L+ + V I
Sbjct: 220 ESLTWLNELQILGKDL--IVYPNSGEVYDAVNKKWNNHPNGTLTWNEYVQELQKLKNVKI 277
Query: 554 IGGCCEVTSYEIQQM 568
IGGCC T +I+Q+
Sbjct: 278 IGGCCRTTPNDIKQI 292
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 129/262 (49%), Gaps = 39/262 (14%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA-- 66
+LDG+ + + ++ H LWS+ + T P H+ +I GA +IQ+S YQ+
Sbjct: 14 VLDGALGTLLP----EEAQSHSLWSTHTVITSPSIIQNIHQQYIENGAQLIQTSTYQSSD 69
Query: 67 --NVDNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAAS 123
++ + Y + +L KS+ L + A+ D+++ + S
Sbjct: 70 HPSLQTEFNIDYEQ-----VLLKSIDLADQARGDRKD-----------------VWIVGS 107
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEALA 182
IGPYG L +G+EY+G Y D + ++L+ +H+ +E L + VD + LET+P E
Sbjct: 108 IGPYGASLANGAEYTGDYGD-IKSSNLVEFHKERLEMLCKDNRVDLIGLETMPNINEIKI 166
Query: 183 LVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
L++L++ + + +LS S DT + G + S + + NP ++ AIGVNC+
Sbjct: 167 LIELMQGYD-KDYYLSLSINGDT-LADGTKVES-LKELVDGNP-KLLAIGVNCLPLKESL 222
Query: 243 TLVRCIKQSHPTVQTIVYPNKG 264
T + ++ + IVYPN G
Sbjct: 223 TWLNELQILGKDL--IVYPNSG 242
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 311 RGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLAL 367
R + SIGPYG L +G+EY+G Y D + ++L+ +H+ +E L + VD + L
Sbjct: 99 RKDVWIVGSIGPYGASLANGAEYTGDYGD-IKSSNLVEFHKERLEMLCKDNRVDLIGL 155
>gi|156837038|ref|XP_001642555.1| hypothetical protein Kpol_1068p7 [Vanderwaltozyma polyspora DSM
70294]
gi|156113098|gb|EDO14697.1| hypothetical protein Kpol_1068p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 323
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 5/198 (2%)
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEA 436
SIGP+G R G+EY+G+Y DS + + + + +P +E +D + ET+P + E
Sbjct: 124 GSIGPFGA--RLGAEYTGNYGDSPSNINYLEYFKPQLEEFNNNDDIDIIGFETVPNKYEL 181
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-LANPDQIQAIGVNCVRPS 495
A++ + + ++S S D+ G T +N D + G NC+
Sbjct: 182 EAILSWDKSVISKPYYVSLSLLDNGGLRDGTSFEEIATIFKKYSNNDNLILTGANCISFK 241
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQWLEEGVNII 554
+ S + + Q+ PT+ IVYPN G ++D + KW +D + + + V I+
Sbjct: 242 YASENISKLHQAIPTLPLIVYPNSGEIYDPLTKKWTIDQTFGLTWEDLIKELRTSNVRIV 301
Query: 555 GGCCEVTSYEIQQMRIMI 572
GGCC T +I +++ MI
Sbjct: 302 GGCCRTTPDDINKIKDMI 319
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 28/240 (11%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALD----LLH 86
W S T++ +RD+I +G+ I+ + YQ + ++ ++E + ++ L+
Sbjct: 49 FWDSETKTSDRNIIEGIYRDYITSGSRILSTITYQTSFALIST--HTEVKTIEGYKQLIR 106
Query: 87 KSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMT 146
SA ++N L G SIGP+G R G+EY+G+Y DS +
Sbjct: 107 NITSFCRSAIGEDN------------YLIG------SIGPFGA--RLGAEYTGNYGDSPS 146
Query: 147 EADLIAWHRPNVEALVRAG-VDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDT 205
+ + + +P +E +D + ET+P + E A++ + + ++S S D+
Sbjct: 147 NINYLEYFKPQLEEFNNNDDIDIIGFETVPNKYELEAILSWDKSVISKPYYVSLSLLDNG 206
Query: 206 HTSHGELISSAVTSCL-LANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
G T +N D + G NC+ + S + + Q+ PT+ IVYPN G
Sbjct: 207 GLRDGTSFEEIATIFKKYSNNDNLILTGANCISFKYASENISKLHQAIPTLPLIVYPNSG 266
>gi|50405455|ref|XP_456363.1| DEHA2A00616p [Debaryomyces hansenii CBS767]
gi|49652027|emb|CAG84308.1| DEHA2A00616p [Debaryomyces hansenii CBS767]
Length = 351
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 137/292 (46%), Gaps = 26/292 (8%)
Query: 10 LDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVD 69
L+ F+ + + I ++ HPLWS++ L PE E H D++ +GA+II +S YQA+
Sbjct: 24 LETKFSKLLQQDNI-NIQTHPLWSALVLLKNPELIQEVHYDYMCSGANIITTSTYQASKR 82
Query: 70 NLTKLG---YSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG-HIETAASIG 125
L + ++ E + K+++L A D +Q + N+ K N LT I SIG
Sbjct: 83 GLLEYAPGIENDDEVNAVYDKAIEL---AVDARSQYLE-NMGKGMNTLTNKEIFICGSIG 138
Query: 126 PYGTVLRDGSEYSGHYVDSMTE-ADLIAWHRPNVEALV-RAGVDYLALETIPAEKEALAL 183
P+G L +G+EY+G Y +TE +L +H + D + ETIP E +
Sbjct: 139 PFGAYLANGAEYTGKYGSHITEPQELKKFHYDITSQFISNPKCDIIGFETIPNYSEFQQI 198
Query: 184 VKLLREF---PGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLANPDQIQA----IGVN 234
V L+ E + ++S + KD G I+ V L+N +++++ +G N
Sbjct: 199 VHLMEELLQKTNKPFYISLNFKDPKTICDGTPITQVVDYLNERLSNNEKLRSAFIGLGCN 258
Query: 235 CVRPSHVSTLVRCIKQSHPTVQT---IVYPNKGVK--LLDGSFTSQVSRHTI 281
CV P ++T + V I YPN G+ L G ++ + S +
Sbjct: 259 CV-PLEIATNILLNMSDLNNVHRFPLIAYPNAGLNYDLSKGEYSIKSSEKQV 309
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 149/339 (43%), Gaps = 46/339 (13%)
Query: 268 LDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFI--RGHIETAASIGPYGT 325
L+ F+ + + I ++ HPLWS++ L PE E H D++ +I T ++ Y
Sbjct: 24 LETKFSKLLQQDNI-NIQTHPLWSALVLLKNPELIQEVHYDYMCSGANIITTST---YQA 79
Query: 326 VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT------AAS 379
R EY+ +++ E + A + +E V A YL + +++ T S
Sbjct: 80 SKRGLLEYAPG-IENDDEVN--AVYDKAIELAVDARSQYLENMGKGMNTLTNKEIFICGS 136
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTE-ADLIAWHRPNVEALV-RAGVDYLALETIPAEKEAL 437
IGP+G L +G+EY+G Y +TE +L +H + D + ETIP E
Sbjct: 137 IGPFGAYLANGAEYTGKYGSHITEPQELKKFHYDITSQFISNPKCDIIGFETIPNYSEFQ 196
Query: 438 ALVKLLREF---PGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLANPDQIQA----IG 488
+V L+ E + ++S + KD G I+ V L+N +++++ +G
Sbjct: 197 QIVHLMEELLQKTNKPFYISLNFKDPKTICDGTPITQVVDYLNERLSNNEKLRSAFIGLG 256
Query: 489 VNCVRPSHVSTLVRCIKQSHPTVQT---IVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQ 545
NCV P ++T + V I YPN G +D ++ EYSI Q
Sbjct: 257 CNCV-PLEIATNILLNMSDLNNVHRFPLIAYPNAGLNYDL-------SKGEYSIKSSEKQ 308
Query: 546 --------WLEE-GVNIIGGCCEVTSYEIQQMRIMIDEF 575
WLE+ V ++G CC EI +R + D+F
Sbjct: 309 VWEDSCREWLEKLNVRLVGACCGSGPDEILTIREVTDKF 347
>gi|242213892|ref|XP_002472772.1| predicted protein [Postia placenta Mad-698-R]
gi|220728175|gb|EED82075.1| predicted protein [Postia placenta Mad-698-R]
Length = 380
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 140/326 (42%), Gaps = 73/326 (22%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG F + + +D+ PLWS+ + PE + H F+RAGAD+I +S YQ
Sbjct: 1 VLILDGGFGTTLEDVFHQDIS-TPLWSARPIEDNPELIIAAHLAFLRAGADVILTSTYQC 59
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD--KENQTPD---INLNKTFNLLTGHIETA 121
+ GY+ ++ + +L K+V L A+ KE PD L+ T ++ I+ A
Sbjct: 60 AFQTFERSGYTREDGVRILRKAVLLATEARRQYKEEGAPDDTSTGLSGTAHVR--DIKIA 117
Query: 122 ASIGPYGTVLRDGSEYSGHY---------------VDSMTEAD------------LIAWH 154
S+GP+G L E+ G Y ++ ++D L A+H
Sbjct: 118 LSLGPFGATLSPAQEFDGFYPPPYGPKGLSQEGGNYNAFPDSDDGKAQEEKAVAALTAFH 177
Query: 155 RPNVEALVR-----AGVDYLALETIPAEKEALAL---VKLLREFPGQKA----WLSF--- 199
+ ALV A +D++A ET+P +E A+ ++LL + G A W+S
Sbjct: 178 LERLRALVEDVETWAAIDFVAFETVPLVREIRAIRHAMELLVQENGASAAKPWWISTVYP 237
Query: 200 SCKDDTHTSHGE-------LISSAVTSCLLANPDQIQ--AIGVNCVRPSHVSTLVRCI-- 248
+ S GE ++ + + L P +GVNC P + L++ +
Sbjct: 238 GGRFPQERSPGEGRLTVRIVVEAIMGEGRLGAPQSPAPWGLGVNCTEPQFIGGLLKEMTN 297
Query: 249 ----------KQSHPTVQTIVYPNKG 264
+ P + +VYPN+G
Sbjct: 298 IMEGLGNTAGRSQSPWL--VVYPNRG 321
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 143/391 (36%), Gaps = 100/391 (25%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIG 321
V +LDG F + + +D+ PLWS+ + PE + H F+R I T+
Sbjct: 1 VLILDGGFGTTLEDVFHQDIS-TPLWSARPIEDNPELIIAAHLAFLRAGADVILTSTYQC 59
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISS------- 374
+ T R G T D + R V A Y P +S
Sbjct: 60 AFQTFERSG----------YTREDGVRILRKAVLLATEARRQYKEEGAPDDTSTGLSGTA 109
Query: 375 -----QTAASIGPYGTVLRDGSEYSGHY---------------VDSMTEAD--------- 405
+ A S+GP+G L E+ G Y ++ ++D
Sbjct: 110 HVRDIKIALSLGPFGATLSPAQEFDGFYPPPYGPKGLSQEGGNYNAFPDSDDGKAQEEKA 169
Query: 406 ---LIAWHRPNVEALVR-----AGVDYLALETIPAEKEALAL---VKLLREFPGQKA--- 451
L A+H + ALV A +D++A ET+P +E A+ ++LL + G A
Sbjct: 170 VAALTAFHLERLRALVEDVETWAAIDFVAFETVPLVREIRAIRHAMELLVQENGASAAKP 229
Query: 452 -WLSF---SCKDDTHTSHGE-------LISSAVTSCLLANPDQIQ--AIGVNCVRPSHVS 498
W+S + S GE ++ + + L P +GVNC P +
Sbjct: 230 WWISTVYPGGRFPQERSPGEGRLTVRIVVEAIMGEGRLGAPQSPAPWGLGVNCTEPQFIG 289
Query: 499 TLVRCI------------KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQW 546
L++ + + P + +VYPN+G V+D+ W + V W
Sbjct: 290 GLLKEMTNIMEGLGNTAGRSQSPWL--VVYPNRGDVYDAASQTWSKGAESIRQNWAVHVW 347
Query: 547 LE----EGVN-----IIGGCCEVTSYEIQQM 568
+ G +IGGCC+ EI ++
Sbjct: 348 ADVQRVAGSKAWSGCLIGGCCKTGPQEIAEL 378
>gi|169846893|ref|XP_001830160.1| homocysteine S-methyltransferase [Coprinopsis cinerea okayama7#130]
gi|116508743|gb|EAU91638.1| homocysteine S-methyltransferase [Coprinopsis cinerea okayama7#130]
Length = 355
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 132/308 (42%), Gaps = 74/308 (24%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K+ +LDG + + +V PLWS+ + + P + ++THR+FI AGA II+++ YQ
Sbjct: 5 KIAILDGGLGTHLENIIGDEVSKGPLWSTQAVISHPLSVLKTHRNFINAGATIIETATYQ 64
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
A++ L K G E EA +L+ K+V L A + + + S+G
Sbjct: 65 ASLPGLIKSGLQEYEARELMWKAVSLAKEAAADSDASIAL-----------------SLG 107
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHR--PNVEAL---------------------- 161
P+G LR E+ G Y A+H PN +A
Sbjct: 108 PFGATLRPTQEFEGFYPPPYGPK---AYHPEGPNTQAFDSNEAEARAIGALAQFHLDRLL 164
Query: 162 -------VRAGVDYLALETIPAEKEALAL---VKLLRE--FPGQKA-----WLSFSCKDD 204
V + YLA ET+ +E +A+ V LLR F ++ W+SF D
Sbjct: 165 VFSQNSAVWDSIQYLAFETLLLPREVIAIRKAVGLLRTHLFKEHRSFDKSWWISFVVPSD 224
Query: 205 -THTSHGELISSAVTSCLLANPDQIQAIGVNC-----VRPSHVSTLVRCIKQSHPTVQ-- 256
T+ S L+SSA L D AIG+NC + P + L R + + P Q
Sbjct: 225 ATNPSVLPLVSSA----LCEGHDLPSAIGINCTSFGTLLPRTLE-LCRLVPRFRPLSQLG 279
Query: 257 TIVYPNKG 264
++YPN G
Sbjct: 280 LVLYPNGG 287
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 147/381 (38%), Gaps = 93/381 (24%)
Query: 261 PNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETA 317
P + +LDG + + +V PLWS+ + + P + ++THR+FI IETA
Sbjct: 2 PKPKIAILDGGLGTHLENIIGDEVSKGPLWSTQAVISHPLSVLKTHRNFINAGATIIETA 61
Query: 318 ASIGPYGTVLRDG-SEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT 376
+++ G EY EA + W V +
Sbjct: 62 TYQASLPGLIKSGLQEY---------EARELMWK----------AVSLAKEAAADSDASI 102
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHR--PNVEAL----------------- 417
A S+GP+G LR E+ G Y A+H PN +A
Sbjct: 103 ALSLGPFGATLRPTQEFEGFYPPPYGPK---AYHPEGPNTQAFDSNEAEARAIGALAQFH 159
Query: 418 ------------VRAGVDYLALETIPAEKEALAL---VKLLRE--FPGQKA-----WLSF 455
V + YLA ET+ +E +A+ V LLR F ++ W+SF
Sbjct: 160 LDRLLVFSQNSAVWDSIQYLAFETLLLPREVIAIRKAVGLLRTHLFKEHRSFDKSWWISF 219
Query: 456 SCKDD-THTSHGELISSAVTSCLLANPDQIQAIGVNC-----VRPSHVSTLVRCIKQSHP 509
D T+ S L+SSA L D AIG+NC + P + L R + + P
Sbjct: 220 VVPSDATNPSVLPLVSSA----LCEGHDLPSAIGINCTSFGTLLPRTLE-LCRLVPRFRP 274
Query: 510 TVQT--IVYPNKGGVWDSVHMKWL----DTEDEYSI------LHYVPQWLEEGVN--IIG 555
Q ++YPN GG +D+ + +WL D + ++ + + + EG I G
Sbjct: 275 LSQLGLVLYPN-GGTYDTTNQRWLPDPVDADRQWGLALRDVLTGVLSETGAEGWRELIAG 333
Query: 556 GCCEVTSYEIQQMRIMIDEFN 576
GCC I Q ++ EF
Sbjct: 334 GCCRTGPSHISQFAELLREFQ 354
>gi|219127265|ref|XP_002183859.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404582|gb|EEC44528.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 418
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 41/240 (17%)
Query: 371 SISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI 430
S+ AS G YG +L +G+EY+G+Y +T DL+ +HR V V+ D +A+ET+
Sbjct: 174 SVPRYVVASSGCYGAILANGAEYTGNY-GPVTVDDLVHFHRRKVRRAVQLHPDGIAIETV 232
Query: 431 PAEKEALALVKLLREFPGQ--------KAWLSFSCKDDTHTSHGELISSAVTSCLLANPD 482
P+ E ALV+L + G W+S SC+++ + G + +A+
Sbjct: 233 PSLLECHALVQLFQPTNGAAPMLLNKTACWISLSCRNERELNDGTPLVAALNVLSQIPCT 292
Query: 483 QIQAIGVNCVRPSHVSTLVRCIKQSHPTVQT--------IVYPNKGGVWDSVHMKW---- 530
+ A G+NC +H+ LVR + Q H + ++YPN G +WD+V W
Sbjct: 293 AVSAWGLNCCSVTHLPALVRILTQ-HVAQEASGKHRRGLVLYPNSGELWDAVTGTWHTGT 351
Query: 531 ----------------LDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDE 574
EDE+ + P + +IGGCC + I +R+++D+
Sbjct: 352 GCTAPAAMASEIVAVLRTVEDEWR--RHRPTDPTPSI-LIGGCCRTSPATIAALRVLVDD 408
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 41/254 (16%)
Query: 46 ETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSA---------- 95
+ H D++RAGA+++ + YQ + + Y + + K ++M+ A
Sbjct: 90 QGHDDWLRAGANVLSTVTYQCHY----QAAYWPKGKMATNDKDSRVMDDAVVNTLWNDGV 145
Query: 96 KDKENQTPDI--NLNKTFNLLTGHIETA-------ASIGPYGTVLRDGSEYSGHYVDSMT 146
+ + D N + L +ET+ AS G YG +L +G+EY+G+Y +T
Sbjct: 146 EIAQQAVKDYCHNQQRPHTLRQPELETSSVPRYVVASSGCYGAILANGAEYTGNY-GPVT 204
Query: 147 EADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQ--------KAWLS 198
DL+ +HR V V+ D +A+ET+P+ E ALV+L + G W+S
Sbjct: 205 VDDLVHFHRRKVRRAVQLHPDGIAIETVPSLLECHALVQLFQPTNGAAPMLLNKTACWIS 264
Query: 199 FSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQT- 257
SC+++ + G + +A+ + A G+NC +H+ LVR + Q H +
Sbjct: 265 LSCRNERELNDGTPLVAALNVLSQIPCTAVSAWGLNCCSVTHLPALVRILTQ-HVAQEAS 323
Query: 258 -------IVYPNKG 264
++YPN G
Sbjct: 324 GKHRRGLVLYPNSG 337
>gi|409080570|gb|EKM80930.1| hypothetical protein AGABI1DRAFT_56118 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 390
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 136/322 (42%), Gaps = 74/322 (22%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG + + + + PLWS+ L+ +PEA V H +++AGA II++S YQ
Sbjct: 16 VIILDGGLGTTLESISKTQIANTPLWSAEALSKDPEAIVAAHLAYLQAGAQIIETSTYQC 75
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH--IETAASI 124
++D + GY+ A L+H+++ L A+ N L I S+
Sbjct: 76 SLDTFQRAGYNIDTAKQLMHRAISLAQKARSIFNTQ-----RSAMQQLIAQPPIRICLSL 130
Query: 125 GPYGTVLRDGSEYSG------------------HYVDSMTEAD-----LIAWHRPNVEAL 161
GP+G L E+ G +Y D +E + L A+H +
Sbjct: 131 GPFGASLSPTQEFEGFYPPPYGPRGYSTESMNSNYFDEDSEEEKAIQALAAFHFERLMMF 190
Query: 162 VR-----AGVDYLALETIPAEKEALALVKLLREFP--------GQKAWLSF-----SCKD 203
+ +D +A ET+P +EA+A+ + + +F G+ W+SF C
Sbjct: 191 AEDKGTWSCIDMIAFETVPLAREAIAIRRTMAKFEDENRDNGMGKAWWISFVLPEGRCPQ 250
Query: 204 DTHT-----SHGELISSAVTSCLLAN--------PDQIQAIGVNCVRPSHVSTLV----- 245
T T + EL+ ++++ LL PD G+NC ++ +V
Sbjct: 251 MTDTDGERLTASELVWASLSPNLLGGREDEDVGVPD---GFGINCTSVEYLPRIVDEMGL 307
Query: 246 RCIK---QSHPTVQTIVYPNKG 264
C+K + P + ++YPN G
Sbjct: 308 ACMKIEREERPFL--VLYPNGG 327
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 158/386 (40%), Gaps = 93/386 (24%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAAS 319
K V +LDG + + + + PLWS+ L+ +PEA V H +++ IET+
Sbjct: 14 KSVIILDGGLGTTLESISKTQIANTPLWSAEALSKDPEAIVAAHLAYLQAGAQIIETST- 72
Query: 320 IGPYGTVLRDGSEYSGHYVDS----MTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ 375
Y L D + +G+ +D+ M A +A ++ R+ + L + +P I +
Sbjct: 73 ---YQCSL-DTFQRAGYNIDTAKQLMHRAISLAQKARSIFNTQRSAMQQL-IAQPPI--R 125
Query: 376 TAASIGPYGTVLRDGSEYSG------------------HYVDSMTEAD-----LIAWHRP 412
S+GP+G L E+ G +Y D +E + L A+H
Sbjct: 126 ICLSLGPFGASLSPTQEFEGFYPPPYGPRGYSTESMNSNYFDEDSEEEKAIQALAAFHFE 185
Query: 413 NVEALVR-----AGVDYLALETIPAEKEALALVKLLREFP--------GQKAWLSF---- 455
+ + +D +A ET+P +EA+A+ + + +F G+ W+SF
Sbjct: 186 RLMMFAEDKGTWSCIDMIAFETVPLAREAIAIRRTMAKFEDENRDNGMGKAWWISFVLPE 245
Query: 456 -SCKDDTHT-----SHGELISSAVTSCLLAN--------PDQIQAIGVNCVRPSHVSTLV 501
C T T + EL+ ++++ LL PD G+NC ++ +V
Sbjct: 246 GRCPQMTDTDGERLTASELVWASLSPNLLGGREDEDVGVPD---GFGINCTSVEYLPRIV 302
Query: 502 -----RCIK---QSHPTVQTIVYPNKGGVWDSVHMKWL--DTEDEYSILHYVPQWLEEGV 551
C+K + P + ++YPN G +D V W D E + +E V
Sbjct: 303 DEMGLACMKIEREERPFL--VLYPNGGDEYDRVRGVWKTGDREKRGEWATRLAGVVERVV 360
Query: 552 N---------IIGGCCEVTSYEIQQM 568
++GGCC ++ +I ++
Sbjct: 361 GCRGCIWGGVVVGGCCRCSAEQIAEL 386
>gi|426197486|gb|EKV47413.1| hypothetical protein AGABI2DRAFT_185360 [Agaricus bisporus var.
bisporus H97]
Length = 388
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 139/321 (43%), Gaps = 72/321 (22%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG + + + + PLWS+ L+ +PEA V H +++AGA II++S YQ
Sbjct: 16 VIILDGGLGTTLESISKTQIANTPLWSAEALSKDPEAIVAAHLAYLQAGAQIIETSTYQC 75
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKD-KENQTPDINLNKTFNLLTGHIETAASIG 125
++D + GY+ A L+H+++ L A+ + Q I + I S+G
Sbjct: 76 SLDTFQRAGYNIDTAKQLMHRAISLAQKARSIFDTQRAAIQQSTA----QPPIRICLSLG 131
Query: 126 PYGTVLRDGSEYSG------------------HYVDSMTEAD-----LIAWHRPNVEALV 162
P+G L E+ G +Y D +E + L A+H +
Sbjct: 132 PFGASLSPTQEFEGFYPPPYEPRGYSTESMNSNYFDEDSEEEKAIQALAAFHFERLMMFA 191
Query: 163 R-----AGVDYLALETIPAEKEALALVKLLREFP--------GQKAWLSF-----SCKDD 204
+ +D +A ET+P +EA+A+ + + +F G+ W+SF C
Sbjct: 192 EDKGTWSCIDMIAFETVPLAREAIAIRRTMAKFEDENRDNGMGKAWWISFVLPEGRCPQM 251
Query: 205 THT-----SHGELISSAVTSCLLAN--------PDQIQAIGVNCVRPSHVSTLV-----R 246
T T + EL+ ++++ LL PD +G+NC ++ +V
Sbjct: 252 TDTDGERLTASELVWASLSPNLLGGREDEDIGVPD---GLGINCTSVEYLPRIVDEMGLA 308
Query: 247 CIK---QSHPTVQTIVYPNKG 264
C+K + P + ++YPN G
Sbjct: 309 CMKIEREERPFL--VLYPNGG 327
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 161/384 (41%), Gaps = 91/384 (23%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAAS 319
K V +LDG + + + + PLWS+ L+ +PEA V H +++ IET+
Sbjct: 14 KSVIILDGGLGTTLESISKTQIANTPLWSAEALSKDPEAIVAAHLAYLQAGAQIIETST- 72
Query: 320 IGPYGTVLRDGSEYSGHYVDS----MTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ 375
Y L D + +G+ +D+ M A +A ++ RA + + +P I +
Sbjct: 73 ---YQCSL-DTFQRAGYNIDTAKQLMHRAISLAQKARSIFDTQRAAIQQ-STAQPPI--R 125
Query: 376 TAASIGPYGTVLRDGSEYSG------------------HYVDSMTEAD-----LIAWHRP 412
S+GP+G L E+ G +Y D +E + L A+H
Sbjct: 126 ICLSLGPFGASLSPTQEFEGFYPPPYEPRGYSTESMNSNYFDEDSEEEKAIQALAAFHFE 185
Query: 413 NVEALVR-----AGVDYLALETIPAEKEALALVKLLREFP--------GQKAWLSF---- 455
+ + +D +A ET+P +EA+A+ + + +F G+ W+SF
Sbjct: 186 RLMMFAEDKGTWSCIDMIAFETVPLAREAIAIRRTMAKFEDENRDNGMGKAWWISFVLPE 245
Query: 456 -SCKDDTHT-----SHGELISSAVTSCLLAN--------PDQIQAIGVNCVRPSHVSTLV 501
C T T + EL+ ++++ LL PD +G+NC ++ +V
Sbjct: 246 GRCPQMTDTDGERLTASELVWASLSPNLLGGREDEDIGVPD---GLGINCTSVEYLPRIV 302
Query: 502 -----RCIK---QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY---------SILHYVP 544
C+K + P + ++YPN G +D VH W + E ++ V
Sbjct: 303 DEMGLACMKIEREERPFL--VLYPNGGDEYDRVHGVWKTGDREKRGEWATRLAGVVERVC 360
Query: 545 QWLEEGVNIIGGCCEVTSYEIQQM 568
+ G ++GGCC+ ++ +I ++
Sbjct: 361 RGCIWGGVVVGGCCQCSAEQIAEL 384
>gi|290971201|ref|XP_002668413.1| predicted protein [Naegleria gruberi]
gi|284081808|gb|EFC35669.1| predicted protein [Naegleria gruberi]
Length = 661
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 131/297 (44%), Gaps = 44/297 (14%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAG-ADIIQSSCY 64
K+ +LDG ++ ++ + +++G LW + YL P+A + H D++ G DI SS Y
Sbjct: 332 KILILDGGISTYMTELGL-ELNG-SLWGANYLLENPKAIAKVHSDYVHEGLCDICTSSSY 389
Query: 65 QANVDNLTK--LGYSEQEALDL----LHKSVQLMNSA---KDKENQTPDINLNKTFNLLT 115
Q + + L + E+E ++L SVQ+ K+K + + L
Sbjct: 390 QISQEGLAADHVSMKEEERIELASRMFRDSVQIARKVVREKEKLVAASVSCFGASISNLL 449
Query: 116 GHIETAASIGPYGTVLRDGSEYSGHYV----------------DSMTEADLIAWHRPNVE 159
G E G Y + +D SGHYV S E + +H P V
Sbjct: 450 G--EAKEYFGDY--LDKDVDSNSGHYVHKFVKQLSEKLGETLEKSGMEQVIYDFHYPRVR 505
Query: 160 ALVRAGVDYLALETIPAEKEALALVK-----LLREF--PGQKAWLSFSCKDDTHTSHGEL 212
L+ A D++ LET+P KE L +L+E G K +SF CKD HT HGE
Sbjct: 506 ELILAEPDFILLETMPVLKEVEILCDRVIPDILKELNKKGIKVMISFYCKDGLHTGHGES 565
Query: 213 ISSAV--TSCLLANPD--QIQAIGVNCVRPSHVSTLVRCI-KQSHPTVQTIVYPNKG 264
I V + NP +I A+G NC+ PS V L+ I + I+YPN G
Sbjct: 566 IEKCVEYVNQDRFNPSLFEIFAVGANCISPSIVPILIENIHTHLRKDISIILYPNSG 622
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 157/360 (43%), Gaps = 62/360 (17%)
Query: 238 PSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTT 297
P+ ++TL+ K S +V ++ + +LDG ++ ++ + +++G LW + YL
Sbjct: 310 PNSMNTLIELDKLS----VILVLVDRKILILDGGISTYMTELGL-ELNG-SLWGANYLLE 363
Query: 298 EPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA----WHRPN 353
P+A + H D++ + + Y + ++G + +V SM E + I R +
Sbjct: 364 NPKAIAKVHSDYVHEGLCDICTSSSY-QISQEG--LAADHV-SMKEEERIELASRMFRDS 419
Query: 354 V----------EALVRAGVDYLALIKPSISSQTAASIGPYGTVL-RDGSEYSGHYV---- 398
V E LV A V SIS+ + +G L +D SGHYV
Sbjct: 420 VQIARKVVREKEKLVAASVSCFG---ASISNLLGEAKEYFGDYLDKDVDSNSGHYVHKFV 476
Query: 399 ------------DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK----- 441
S E + +H P V L+ A D++ LET+P KE L
Sbjct: 477 KQLSEKLGETLEKSGMEQVIYDFHYPRVRELILAEPDFILLETMPVLKEVEILCDRVIPD 536
Query: 442 LLREF--PGQKAWLSFSCKDDTHTSHGELISSAV--TSCLLANPD--QIQAIGVNCVRPS 495
+L+E G K +SF CKD HT HGE I V + NP +I A+G NC+ PS
Sbjct: 537 ILKELNKKGIKVMISFYCKDGLHTGHGESIEKCVEYVNQDRFNPSLFEIFAVGANCISPS 596
Query: 496 HVSTLVRCI-KQSHPTVQTIVYPNKGGVWDSVHMKW------LDTEDEYSILHYVPQWLE 548
V L+ I + I+YPN G ++D++ W LD + + ++ +W E
Sbjct: 597 IVPILIENIHTHLRKDISIILYPNSGEIYDNLTKSWSIPQGGLDWLYDRDFIPFIKKWSE 656
>gi|313236014|emb|CBY11341.1| unnamed protein product [Oikopleura dioica]
Length = 148
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 84/162 (51%), Gaps = 21/162 (12%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+VK++DG +++ R ++DVD H LWS++ P++ V+ H++FI AGAD+I S+ YQ
Sbjct: 4 QVKVIDGGMGTELVRCGVQDVDKHKLWSALANVDFPDSVVQAHKNFIDAGADVIISNTYQ 63
Query: 66 ANVDNL-TKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
+N L ++L S +EA +LL K+V L A E A SI
Sbjct: 64 SNQPLLMSELQISREEADNLLLKTVDLARKAAGSETI------------------VAGSI 105
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGV 166
GP+ SEY Y+ M+ +L WH P E L + G+
Sbjct: 106 GPFPDC--PASEYDPQYLKRMSFEELYNWHLPRFELLAKKGL 145
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
VK++DG +++ R ++DVD H LWS++ P++ V+ H++FI + S
Sbjct: 5 VKVIDGGMGTELVRCGVQDVDKHKLWSALANVDFPDSVVQAHKNFIDAGADVIIS----- 59
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT--AASIGP 382
+ Y + M+E + R + L+ VD L + + S+T A SIGP
Sbjct: 60 ------NTYQSNQPLLMSELQI---SREEADNLLLKTVD---LARKAAGSETIVAGSIGP 107
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGV 422
+ SEY Y+ M+ +L WH P E L + G+
Sbjct: 108 FPDC--PASEYDPQYLKRMSFEELYNWHLPRFELLAKKGL 145
>gi|388582815|gb|EIM23118.1| Homocysteine S-methyltransferase [Wallemia sebi CBS 633.66]
Length = 341
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 134/286 (46%), Gaps = 43/286 (15%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++++LDG +Q+ + + D+ G LWS+ L P+ + HRD++ AGADII++ YQ
Sbjct: 3 ELEILDGGGATQLETYNL-DLTGS-LWSASALNDNPDLVEQMHRDYLEAGADIIETCTYQ 60
Query: 66 ANVDNLTKLGYSEQEAL-DLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
+++ G+ +EA + K VQ+ N+A + N+ + + A ++
Sbjct: 61 VSLE-----GFKTKEATSSAVQKGVQIANNAINTHNEVDH----------SSQKQLAYAL 105
Query: 125 GPYGTVLRDGSEYSGHY-VD------SMTEADLIAWHRPNVEAL-VRAGVDYLALETIPA 176
GP+ DG+EY+G Y VD S+ +L +H ++ L +A VD L ET+P
Sbjct: 106 GPFAVATADGAEYTGEYSVDYSLSQGSLYSENLKQFHLGRLKVLNTQAKVDILLFETVPL 165
Query: 177 EKEALALVKLLREFPGQ-----KAWLSFSCKDDTHTSHGEL------ISSAVTSCLLANP 225
E A+ + E+ ++S D + L I + + N
Sbjct: 166 LSEVRAIRAAVEEYRAYVKSSVPLYISLVFPDGSLPGSKILSEGPSGIKDIIETIFGGNS 225
Query: 226 DQIQAIGVNCVRPSHVSTLVRCI------KQSHPTVQTIVYPNKGV 265
++ AIG+NC +P ++ LV I + + + ++YP+ G+
Sbjct: 226 AEVDAIGINCTKPHYLRRLVSDIVDHLSSYELNRKPKLMIYPDGGL 271
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 144/359 (40%), Gaps = 84/359 (23%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETA---A 318
+++LDG +Q+ + + D+ G LWS+ L P+ + HRD++ IET
Sbjct: 4 LEILDGGGATQLETYNL-DLTGS-LWSASALNDNPDLVEQMHRDYLEAGADIIETCTYQV 61
Query: 319 SIGPYGT------VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSI 372
S+ + T ++ G + + + +++ E D S
Sbjct: 62 SLEGFKTKEATSSAVQKGVQIANNAINTHNEVD------------------------HSS 97
Query: 373 SSQTAASIGPYGTVLRDGSEYSGHY-VD------SMTEADLIAWHRPNVEAL-VRAGVDY 424
Q A ++GP+ DG+EY+G Y VD S+ +L +H ++ L +A VD
Sbjct: 98 QKQLAYALGPFAVATADGAEYTGEYSVDYSLSQGSLYSENLKQFHLGRLKVLNTQAKVDI 157
Query: 425 LALETIPAEKEALALVKLLREFPGQ-----KAWLSFSCKDDTHTSHGEL------ISSAV 473
L ET+P E A+ + E+ ++S D + L I +
Sbjct: 158 LLFETVPLLSEVRAIRAAVEEYRAYVKSSVPLYISLVFPDGSLPGSKILSEGPSGIKDII 217
Query: 474 TSCLLANPDQIQAIGVNCVRPSHVSTLVRCI------KQSHPTVQTIVYPNKGGVWDSVH 527
+ N ++ AIG+NC +P ++ LV I + + + ++YP+ G VWD
Sbjct: 218 ETIFGGNSAEVDAIGINCTKPHYLRRLVSDIVDHLSSYELNRKPKLMIYPDGGLVWDGKE 277
Query: 528 MKWLDTEDEYSILHYVPQWLE-----------------EGVNIIGGCCEVTSYEIQQMR 569
W E + H W E GV I+GG C+ EI+Q+R
Sbjct: 278 RVWRQPEHSH---HADSSWAETVADAASIVANDAFSPFSGV-IVGGYCKSGPKEIKQLR 332
>gi|378729086|gb|EHY55545.1| homocysteine S-methyltransferase [Exophiala dermatitidis
NIH/UT8656]
Length = 333
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 122/283 (43%), Gaps = 40/283 (14%)
Query: 7 VKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ LLDG T+ H ++ PLWSS L P RDF AGADII ++ YQ
Sbjct: 10 ILLLDGGLGTTLEDEHGVRFSVKTPLWSSHLLVENPSLLRVVQRDFANAGADIILTATYQ 69
Query: 66 ANVDNL------TKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIE 119
A+ + +G + +A + +V + A FN +G +
Sbjct: 70 ASFEGFRNTKTQNDVGIAADDAKKYMLSAVSIARDA---------------FNGRSGLV- 113
Query: 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL-----VRAGVDYLALETI 174
A S+G YG + +EYSG Y M E DL +H + V A +D +A ET+
Sbjct: 114 -ALSLGAYGATMVPSTEYSGEY-GPMNEDDLFKFHMDRISIFTCDKPVWADIDLVAFETL 171
Query: 175 PAEKEALALVKLLREFPGQKAWLS--FSCKDDTHTSHGELISSAVTSCLLANPDQIQAIG 232
P E K++R + W+S F DD E+ + +L + AIG
Sbjct: 172 PRLDEVRVARKVMRTITDKDYWISCVFPNNDDRLPDGTEV--EDLVRTMLHGERRPFAIG 229
Query: 233 VNCVRPSHVSTLVRCIKQSHPTV-----QTIVYPN-KGVKLLD 269
+NC + V L+R +++ ++ + ++YP+ G K+ D
Sbjct: 230 LNCTKVHKVPGLIRRFEEAAQSLSIKLPRLVIYPDGAGTKVYD 272
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 140/341 (41%), Gaps = 47/341 (13%)
Query: 262 NKGVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETA 317
+ + LLDG T+ H ++ PLWSS L P RDF I TA
Sbjct: 7 GRNILLLDGGLGTTLEDEHGVRFSVKTPLWSSHLLVENPSLLRVVQRDFANAGADIILTA 66
Query: 318 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA 377
+ +G + D AD + + ++ R + S A
Sbjct: 67 TYQASF-----EGFRNTKTQNDVGIAADDAKKYMLSAVSIARDAFN-------GRSGLVA 114
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL-----VRAGVDYLALETIPA 432
S+G YG + +EYSG Y M E DL +H + V A +D +A ET+P
Sbjct: 115 LSLGAYGATMVPSTEYSGEY-GPMNEDDLFKFHMDRISIFTCDKPVWADIDLVAFETLPR 173
Query: 433 EKEALALVKLLREFPGQKAWLS--FSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490
E K++R + W+S F DD E+ + +L + AIG+N
Sbjct: 174 LDEVRVARKVMRTITDKDYWISCVFPNNDDRLPDGTEV--EDLVRTMLHGERRPFAIGLN 231
Query: 491 CVRPSHVSTLVRCIKQSHPTV-----QTIVYPNKGG--VWDSVHMKWLDTEDE------- 536
C + V L+R +++ ++ + ++YP+ G V+D+ +W+ + +
Sbjct: 232 CTKVHKVPGLIRRFEEAAQSLSIKLPRLVIYPDGAGTKVYDTQLQQWVGEDQDAKAWDQQ 291
Query: 537 -YSILHYVP---QWLEEGVNIIGGCCEVTSYEIQQMRIMID 573
+ I+ V W EGV I+GGCC+ T IQ++ +D
Sbjct: 292 IFEIVSDVQTRGAW--EGV-IVGGCCKTTPEHIQKLGKRLD 329
>gi|146423214|ref|XP_001487538.1| hypothetical protein PGUG_00915 [Meyerozyma guilliermondii ATCC
6260]
Length = 313
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 136/324 (41%), Gaps = 39/324 (12%)
Query: 267 LLDGSFTSQVSRHTIKD---VDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
+LDG Q+ K V PLWS L P+ + H+ F+ + +
Sbjct: 8 VLDGGLGIQLETLAEKRNFAVKNDPLWSGRALIEAPDLIEDVHKSFLEAGCDIVTT---- 63
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD--YLALIKPSISSQTAASIG 381
S + + + + +E L VD + A ++ +IG
Sbjct: 64 ----------STYQISRASLKKYTDFTDAQIEELWAKSVDVCWQACKFHESKARVCGAIG 113
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-AGVDYLALETIPAEKEALALV 440
PYG L + +EY+G Y +T L +H P L VD LA ETIP KE +V
Sbjct: 114 PYGGFLANYAEYTGEY-GLITNHKLEQYHLPLATFLNNNPKVDILAFETIPNYKELKVIV 172
Query: 441 KLLREF----PGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANP---DQIQAIGVN 490
L+ + P + +LS + ++ + S G E I + L N ++ AIG N
Sbjct: 173 NLVCKMSATGPLKPFYLSMNFRNSSQMSDGTPIEKIMGYLNGKLNKNRTLRKRLIAIGCN 232
Query: 491 CVRPSHVSTLVRCIKQ-SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEE 549
C + +++ I+ ++ + TIVYPN V DT+ + L V +WL+
Sbjct: 233 CTELKDATHVLKNIETYNYHNIPTIVYPN-------VFADHNDTKIDQKWLQLVDEWLKI 285
Query: 550 GVNIIGGCCEVTSYEIQQMRIMID 573
G +IIGGCC +I Q+R +D
Sbjct: 286 GASIIGGCCGTGPKQIAQIRFKVD 309
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)
Query: 9 LLDGSFTSQVSRHTIKD---VDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+LDG Q+ K V PLWS L P+ + H+ F+ AG DI+ +S YQ
Sbjct: 8 VLDGGLGIQLETLAEKRNFAVKNDPLWSGRALIEAPDLIEDVHKSFLEAGCDIVTTSTYQ 67
Query: 66 ANVDNLTKL-GYSEQEALDLLHKSVQLM-NSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
+ +L K +++ + +L KSV + + K E++ +
Sbjct: 68 ISRASLKKYTDFTDAQIEELWAKSVDVCWQACKFHESKA----------------RVCGA 111
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL-VRAGVDYLALETIPAEKEALA 182
IGPYG L + +EY+G Y +T L +H P L VD LA ETIP KE
Sbjct: 112 IGPYGGFLANYAEYTGEY-GLITNHKLEQYHLPLATFLNNNPKVDILAFETIPNYKELKV 170
Query: 183 LVKLLREF----PGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLAN---PDQIQAIG 232
+V L+ + P + +LS + ++ + S G E I + L N ++ AIG
Sbjct: 171 IVNLVCKMSATGPLKPFYLSMNFRNSSQMSDGTPIEKIMGYLNGKLNKNRTLRKRLIAIG 230
Query: 233 VNCVRPSHVSTLVRCIKQ-SHPTVQTIVYPN 262
NC + +++ I+ ++ + TIVYPN
Sbjct: 231 CNCTELKDATHVLKNIETYNYHNIPTIVYPN 261
>gi|50556936|ref|XP_505876.1| YALI0F25641p [Yarrowia lipolytica]
gi|49651746|emb|CAG78687.1| YALI0F25641p [Yarrowia lipolytica CLIB122]
Length = 348
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 120/257 (46%), Gaps = 28/257 (10%)
Query: 24 KDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQ--EA 81
+ +D HP W H+D++ AGADI+ S+ YQA+++ K G ++ EA
Sbjct: 60 RALDEHPEWLESS-QDNSNLLYRIHKDYVVAGADIVTSASYQASLEGTIKAGAVQRWPEA 118
Query: 82 LDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHY 141
L +L KS QL+ A + + L AAS+GP+G L G EY+G Y
Sbjct: 119 LWMLRKSEQLVRKAVTEAKVKRKVLL-------------AASVGPFGAWLGGGQEYNGDY 165
Query: 142 VDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE-FPGQ--KAWLS 198
T+ D+ H + A++ D L +ETIP+ E LV +L P LS
Sbjct: 166 T-GYTKDDIRRHHEFKIRAVLGGSPDMLLIETIPSIIEVEVLVDVLNTILPPSPIPVCLS 224
Query: 199 FSCK----DDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPT 254
S K D + G +S+ L A+ +GVNC + V+ L I Q H +
Sbjct: 225 LSVKSADYDRVALADGSELSNIAE--LAASCPSFTHLGVNCCAET-VAKLSLDILQQHTS 281
Query: 255 VQTIVYPNKGVKLLDGS 271
+Q IVYPN G ++ DG+
Sbjct: 282 LQLIVYPNSG-EVYDGA 297
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 102/234 (43%), Gaps = 14/234 (5%)
Query: 349 WHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA 408
W E LVR V + + + AAS+GP+G L G EY+G Y T+ D+
Sbjct: 120 WMLRKSEQLVRKAVTEAKVKRKVL---LAASVGPFGAWLGGGQEYNGDYT-GYTKDDIRR 175
Query: 409 WHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF--PGQ-KAWLSFSCK----DDT 461
H + A++ D L +ETIP+ E LV +L P LS S K D
Sbjct: 176 HHEFKIRAVLGGSPDMLLIETIPSIIEVEVLVDVLNTILPPSPIPVCLSLSVKSADYDRV 235
Query: 462 HTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGG 521
+ G +S+ L A+ +GVNC + V+ L I Q H ++Q IVYPN G
Sbjct: 236 ALADGSELSNIAE--LAASCPSFTHLGVNCCAET-VAKLSLDILQQHTSLQLIVYPNSGE 292
Query: 522 VWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEF 575
V+D W D + + V+I+GGCC I +R +D F
Sbjct: 293 VYDGATKTWSGNCDSSFLEAATLSDWQTSVSILGGCCRTGPPHIAFLRHKVDGF 346
>gi|392569691|gb|EIW62864.1| Homocysteine S-methyltransferase [Trametes versicolor FP-101664
SS1]
Length = 370
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 134/312 (42%), Gaps = 59/312 (18%)
Query: 2 SKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQS 61
+K +V +LDG + + +D+ H LWS+ + +PE + H F+RAGAD+I +
Sbjct: 7 AKRTQVLILDGGLGTTLEDVFHQDIS-HALWSAKPIDEDPEVIISAHLAFLRAGADVILT 65
Query: 62 SCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH-IET 120
S YQ + GY+ +A ++ KSVQL A+ + + L T ++
Sbjct: 66 SSYQCAYTTFERAGYTRDDARRIMLKSVQLAQEARRRFREE---------TLATPRDVKI 116
Query: 121 AASIGPYGTVLRDGSEYSGHY----------VDSMTEA----------------DLIAWH 154
A S+GPYG +L E+ G Y T A +L A+H
Sbjct: 117 ALSLGPYGAMLYPAQEFDGFYPPPYGPVLSPSQKKTNAFEDTPEGTAQEQAAIDELAAFH 176
Query: 155 RPNVEALV-RAG----VDYLALETIPAEKEALALVKLLREFPGQKA---WLSFSCKD--- 203
+ AG VD++A ET+P +E A+ K + F G++ W+S
Sbjct: 177 YERLCTFADDAGTWDVVDFVAFETVPLRREIYAIRKAVACFGGERMKPWWISTDYPGGRF 236
Query: 204 -DTHTSHGELISSAVTSCLLANPDQIQA--IGVNCVRPSHVSTLV---RCIKQSH----- 252
+T + L ++ S L + ++ A G+NC + L+ R + + H
Sbjct: 237 PETKANGEHLTATDAASAALLDGEETAAWGFGINCTGLEFLPALLEEARAVAKKHLEKHG 296
Query: 253 PTVQTIVYPNKG 264
+ ++YPN+G
Sbjct: 297 KRLWLVLYPNRG 308
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 149/378 (39%), Gaps = 77/378 (20%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ +S+P +T V +LDG + + +D+ H LWS+ + +PE + H
Sbjct: 1 MSESNPAKRTQVL------ILDGGLGTTLEDVFHQDIS-HALWSAKPIDEDPEVIISAHL 53
Query: 308 DFIRGH---IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY 364
F+R I T++ Y T R G Y ++ + EA R +
Sbjct: 54 AFLRAGADVILTSSYQCAYTTFERAG------YTRDDARRIMLKSVQLAQEARRRFREET 107
Query: 365 LALIKPSISSQTAASIGPYGTVLRDGSEYSGHY----------VDSMTEA---------- 404
LA + + A S+GPYG +L E+ G Y T A
Sbjct: 108 LATPR---DVKIALSLGPYGAMLYPAQEFDGFYPPPYGPVLSPSQKKTNAFEDTPEGTAQ 164
Query: 405 ------DLIAWHRPNVEALV-RAG----VDYLALETIPAEKEALALVKLLREFPGQKA-- 451
+L A+H + AG VD++A ET+P +E A+ K + F G++
Sbjct: 165 EQAAIDELAAFHYERLCTFADDAGTWDVVDFVAFETVPLRREIYAIRKAVACFGGERMKP 224
Query: 452 -WLSFSCKD----DTHTSHGELISSAVTSCLLANPDQIQA--IGVNCVRPSHVSTLV--- 501
W+S +T + L ++ S L + ++ A G+NC + L+
Sbjct: 225 WWISTDYPGGRFPETKANGEHLTATDAASAALLDGEETAAWGFGINCTGLEFLPALLEEA 284
Query: 502 RCIKQSH-----PTVQTIVYPNKGGVWDSVHMKWLDTEDEYS---------ILHYVPQWL 547
R + + H + ++YPN+G V+D V W ++ + +L +
Sbjct: 285 RAVAKKHLEKHGKRLWLVLYPNRGDVYDPVTQSWRESSGQGQKWAVGFGTVVLDAIAHGD 344
Query: 548 EEGVNIIGGCCEVTSYEI 565
EGV I GGCC+ EI
Sbjct: 345 WEGV-IAGGCCKTGPDEI 361
>gi|227832445|ref|YP_002834152.1| homocysteine methyltransferase [Corynebacterium aurimucosum ATCC
700975]
gi|227453461|gb|ACP32214.1| homocysteine S-methyltransferase [Corynebacterium aurimucosum ATCC
700975]
Length = 292
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 128/315 (40%), Gaps = 41/315 (13%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
LLDG + + D+ G PLWS+ L P H DF + A +
Sbjct: 9 LLDGGLGTHLEAQG-HDISG-PLWSARVLRENPTLLESAHADFFAAGAQVATT------- 59
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL-ALIKPSISSQTA-------A 378
+ Y + D + E + EAL+R V ++ ++ TA A
Sbjct: 60 ----ASYQVTF-DVLGE---------DAEALLRRSVAVAREAVRVAVDKHTAHGDLLVAA 105
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
SIGPYG G++Y G Y + +L WH + L D+L ETIP EA A
Sbjct: 106 SIGPYGAGPGKGTDYDGAY--DLRRGELQRWHARRIAVLADTDADFLLAETIPNVDEAAA 163
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
L++LL+ P A ++I A S ++ A+GVNCV PS
Sbjct: 164 LLELLKAQPKPFALSITGAIAADQAKLSQVIELANQS------SRLGALGVNCVSPSQAR 217
Query: 499 TLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDT-EDEYSILHYVPQWLEEGVNIIGGC 557
+V ++ + PN G VWD W D S+ Q GV+++GGC
Sbjct: 218 AVVATLRAGTDK-PLLACPNSGEVWDCTAHDWQPAPADAMSLPEAALQLRAAGVSVLGGC 276
Query: 558 CEVTSYEIQQMRIMI 572
C V EI+Q+R I
Sbjct: 277 CRVGPAEIRQLRRAI 291
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 107/256 (41%), Gaps = 26/256 (10%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG + + D+ G PLWS+ L P H DF AGA + ++ YQ
Sbjct: 9 LLDGGLGTHLEAQG-HDISG-PLWSARVLRENPTLLESAHADFFAAGAQVATTASYQVTF 66
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
D L ++A LL +SV + A + + + G + AASIGPYG
Sbjct: 67 DVLG------EDAEALLRRSVAVAREA---------VRVAVDKHTAHGDLLVAASIGPYG 111
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
G++Y G Y + +L WH + L D+L ETIP EA AL++LL+
Sbjct: 112 AGPGKGTDYDGAY--DLRRGELQRWHARRIAVLADTDADFLLAETIPNVDEAAALLELLK 169
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
P A ++I A S ++ A+GVNCV PS +V +
Sbjct: 170 AQPKPFALSITGAIAADQAKLSQVIELANQS------SRLGALGVNCVSPSQARAVVATL 223
Query: 249 KQSHPTVQTIVYPNKG 264
+ + PN G
Sbjct: 224 RAGTDK-PLLACPNSG 238
>gi|190345013|gb|EDK36817.2| hypothetical protein PGUG_00915 [Meyerozyma guilliermondii ATCC
6260]
Length = 313
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 135/324 (41%), Gaps = 39/324 (12%)
Query: 267 LLDGSFTSQVSRHTIKD---VDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
+LDG Q+ K V PLWS L P+ + H+ F+ + +
Sbjct: 8 VLDGGLGIQLETLAEKRNFAVKNDPLWSGRALIEAPDLIEDVHKSFLEAGCDIVTT---- 63
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD--YLALIKPSISSQTAASIG 381
S + + + + +E L VD + A ++ +IG
Sbjct: 64 ----------STYQISRASLKKYTDFTDAQIEELWAKSVDVCWQACKFHESKARVCGAIG 113
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-AGVDYLALETIPAEKEALALV 440
PYG L + +EY+G Y +T L +H P L VD LA ETIP KE +V
Sbjct: 114 PYGGFLANYAEYTGEY-GLITNHKLEQYHLPLATFLNNNPKVDILAFETIPNYKELKVIV 172
Query: 441 KLLREF----PGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANP---DQIQAIGVN 490
L+ + P + +LS + ++ + S G E I + L N ++ AIG N
Sbjct: 173 NLVCKMSATGPLKPFYLSMNFRNSSQMSDGTPIEKIMGYLNGKLNKNRTLRKRLIAIGCN 232
Query: 491 CVRPSHVSTLVRCIKQ-SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEE 549
C + +++ I+ ++ + TIVYPN V DT+ + V +WL+
Sbjct: 233 CTELKDATHVLKNIETYNYHNIPTIVYPN-------VFADHNDTKIDQKWSQSVDEWLKI 285
Query: 550 GVNIIGGCCEVTSYEIQQMRIMID 573
G +IIGGCC +I Q+R +D
Sbjct: 286 GASIIGGCCGTGPKQIAQIRFKVD 309
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)
Query: 9 LLDGSFTSQVSRHTIKD---VDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+LDG Q+ K V PLWS L P+ + H+ F+ AG DI+ +S YQ
Sbjct: 8 VLDGGLGIQLETLAEKRNFAVKNDPLWSGRALIEAPDLIEDVHKSFLEAGCDIVTTSTYQ 67
Query: 66 ANVDNLTKL-GYSEQEALDLLHKSVQLM-NSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
+ +L K +++ + +L KSV + + K E++ +
Sbjct: 68 ISRASLKKYTDFTDAQIEELWAKSVDVCWQACKFHESKA----------------RVCGA 111
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL-VRAGVDYLALETIPAEKEALA 182
IGPYG L + +EY+G Y +T L +H P L VD LA ETIP KE
Sbjct: 112 IGPYGGFLANYAEYTGEY-GLITNHKLEQYHLPLATFLNNNPKVDILAFETIPNYKELKV 170
Query: 183 LVKLLREF----PGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLAN---PDQIQAIG 232
+V L+ + P + +LS + ++ + S G E I + L N ++ AIG
Sbjct: 171 IVNLVCKMSATGPLKPFYLSMNFRNSSQMSDGTPIEKIMGYLNGKLNKNRTLRKRLIAIG 230
Query: 233 VNCVRPSHVSTLVRCIKQ-SHPTVQTIVYPN 262
NC + +++ I+ ++ + TIVYPN
Sbjct: 231 CNCTELKDATHVLKNIETYNYHNIPTIVYPN 261
>gi|307193332|gb|EFN76194.1| Homocysteine S-methyltransferase [Harpegnathos saltator]
Length = 342
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 122/266 (45%), Gaps = 21/266 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
KV +LDG+ Q+SR+ + + + L + +A + H DF+RAGA II+++ Y+
Sbjct: 3 KVIVLDGALDKQLSRNMPHISETDEVLAMRALMYDQDAVYKAHLDFLRAGAQIIRTNTYR 62
Query: 66 ANVDNLTK-----LGYSEQE----ALDLLHKSV-QLMNSAKDKENQTPDINLNKTFNLLT 115
+ + +Q A+ L K+V + N D N + L+
Sbjct: 63 TTISLFPSAFGLPICICDQTRVITAVALAKKAVRKYFEEIGGDSNNIEDYNQRRP--LIA 120
Query: 116 GHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 175
G + + P+ V G + + L+++H ++ LVR+GVD LA E+I
Sbjct: 121 GCCD-GYNFLPFYDV--------GKITKELPISQLLSFHEERIDILVRSGVDILAFESIS 171
Query: 176 AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 235
E +A+ + LR++P + W++F CK + L+ +A+ C P Q+ A+GV C
Sbjct: 172 CLIEVIAISQALRKYPTIRVWITFLCKMNGDLLDDNLLITAIMLCKETLPGQLMAVGVEC 231
Query: 236 VRPSHVSTLVRCIKQSHPTVQTIVYP 261
+ +R + ++ + V+P
Sbjct: 232 QYIASSLEPIRTLMRNINNFKDWVFP 257
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 92/191 (48%), Gaps = 5/191 (2%)
Query: 395 GHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLS 454
G + + L+++H ++ LVR+GVD LA E+I E +A+ + LR++P + W++
Sbjct: 135 GKITKELPISQLLSFHEERIDILVRSGVDILAFESISCLIEVIAISQALRKYPTIRVWIT 194
Query: 455 FSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTI 514
F CK + L+ +A+ C P Q+ A+GV C + +R + ++ +
Sbjct: 195 FLCKMNGDLLDDNLLITAIMLCKETLPGQLMAVGVECQYIASSLEPIRTLMRNINNFKDW 254
Query: 515 VYPNKGGVWDSVHMKWL----DTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRI 570
V+P + D H+ + D + V QWL+ GV +GG + +I+++
Sbjct: 255 VFPFLFYI-DKNHLSTMTVPVDAAGPSRPVQPVAQWLDIGVRYVGGGFGTNAEDIKEICR 313
Query: 571 MIDEFNTKKND 581
+D + + +
Sbjct: 314 EVDYYRISRGE 324
>gi|324520873|gb|ADY47731.1| Homocysteine S-methyltransferase 3 [Ascaris suum]
Length = 122
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 68/121 (56%), Gaps = 4/121 (3%)
Query: 425 LALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQ 483
LA ETIPAEKE +A++K L P K W+SFSC+D T T+H E + V+ + +
Sbjct: 2 LAFETIPAEKEGIAILKALDLLPANVKCWISFSCRDGTQTNHCESFAKVVSE--VTKHPK 59
Query: 484 IQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHY 542
+ A+G+NC P ++S+L+R K S +VYPN G ++ W D + SI Y
Sbjct: 60 VIAVGINCTPPKYISSLLRSAKSSCNGKPFVVYPNSGETYNVETKSWSDDKSTMRSIASY 119
Query: 543 V 543
V
Sbjct: 120 V 120
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 169 LALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQ 227
LA ETIPAEKE +A++K L P K W+SFSC+D T T+H E + V+ + +
Sbjct: 2 LAFETIPAEKEGIAILKALDLLPANVKCWISFSCRDGTQTNHCESFAKVVSE--VTKHPK 59
Query: 228 IQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+ A+G+NC P ++S+L+R K S +VYPN G
Sbjct: 60 VIAVGINCTPPKYISSLLRSAKSSCNGKPFVVYPNSG 96
>gi|429762214|ref|ZP_19294614.1| hypothetical protein HMPREF0369_01139 [Anaerostipes hadrus DSM
3319]
gi|429182028|gb|EKY23153.1| hypothetical protein HMPREF0369_01139 [Anaerostipes hadrus DSM
3319]
Length = 199
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 77/150 (51%), Gaps = 3/150 (2%)
Query: 419 RAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLL 478
+AG D + ET+P+ KEA ++ E+ G W+SFSC + G I+ T+
Sbjct: 41 KAGADIILFETVPSLKEAKVEAEIAEEY-GYDYWISFSCLSENIICEGTPIAECATTFAK 99
Query: 479 ANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYS 538
P ++ IGVNC +P +++ L+ IK++ + VYPN G +D+V W + S
Sbjct: 100 GYP-HLKMIGVNCTKPEYITGLIHKIKEN-CDIPIGVYPNSGEEYDAVKKVWFGKQSALS 157
Query: 539 ILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
Y +++ G + +GGCC ++++
Sbjct: 158 FEQYAYNYMKSGASAVGGCCTTVEKHVEEV 187
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 163 RAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLL 222
+AG D + ET+P+ KEA ++ E+ G W+SFSC + G I+ T+
Sbjct: 41 KAGADIILFETVPSLKEAKVEAEIAEEY-GYDYWISFSCLSENIICEGTPIAECATTFAK 99
Query: 223 ANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
P ++ IGVNC +P +++ L+ IK++ + VYPN G
Sbjct: 100 GYP-HLKMIGVNCTKPEYITGLIHKIKEN-CDIPIGVYPNSG 139
>gi|154308390|ref|XP_001553531.1| hypothetical protein BC1G_08255 [Botryotinia fuckeliana B05.10]
Length = 369
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 122/304 (40%), Gaps = 43/304 (14%)
Query: 1 MSKICKVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTE----PEACVETHRDFIRAG 55
MS CK+ LLDG T+ H ++ + PLWSS L P+ + T + F+ AG
Sbjct: 1 MSPGCKIHLLDGGLGTTLGDSHQVQFTEKEPLWSSQLLIPTHPHGPKTLLATQKSFVDAG 60
Query: 56 ADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKE------NQTPDINLNK 109
ADI+ ++ YQ + + GY+ H S + DKE DI +
Sbjct: 61 ADILLTATYQTSYEGFGGSGYAVHS-----HSSSNSGKADGDKEEVNGIMRSAVDIASDA 115
Query: 110 TFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD-LIAWHRPNVEALVR----- 163
+ + A S+G YG ++ G EY+G Y D ++ L +WH + R
Sbjct: 116 FSTKKDSNGKIALSLGAYGAIMTPGQEYTGKYDDDHKSSEQLSSWHHERISVFSRDPKCW 175
Query: 164 AGVDYLALETIPAEKEALALVKLLREFPGQKA--------WLSFSCKDDTHTSHGELISS 215
VDY+A ETIP +E + K + E W++ + + G
Sbjct: 176 ERVDYVAFETIPLLEEIEGVRKSMGEVENSNGGTAGSKPFWITCVFPGEGNCLPGGSSVQ 235
Query: 216 AVTSCLLANPDQIQ---AIGVNCVRPSHVSTLVRCIKQSHPTV----------QTIVYPN 262
+ +L N IG+NC + V +L+ +Q + +VYP+
Sbjct: 236 QIMQAMLGNKGGSPVPFGIGLNCTKVGKVESLILEFEQEVKALIEKGDVSEWPSLVVYPD 295
Query: 263 KGVK 266
+K
Sbjct: 296 GTIK 299
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 148/370 (40%), Gaps = 55/370 (14%)
Query: 261 PNKGVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTE----PEACVETHRDFIRGHIE 315
P + LLDG T+ H ++ + PLWSS L P+ + T + F+ +
Sbjct: 3 PGCKIHLLDGGLGTTLGDSHQVQFTEKEPLWSSQLLIPTHPHGPKTLLATQKSFVDAGAD 62
Query: 316 ---TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA---LIK 369
TA Y G H + +AD + V ++R+ VD + K
Sbjct: 63 ILLTATYQTSYEGFGGSGYAVHSHSSSNSGKAD---GDKEEVNGIMRSAVDIASDAFSTK 119
Query: 370 PSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEAD-LIAWHRPNVEALVR-----AGVD 423
+ + A S+G YG ++ G EY+G Y D ++ L +WH + R VD
Sbjct: 120 KDSNGKIALSLGAYGAIMTPGQEYTGKYDDDHKSSEQLSSWHHERISVFSRDPKCWERVD 179
Query: 424 YLALETIPAEKEALALVKLLREFPGQKA--------WLSFSCKDDTHTSHGELISSAVTS 475
Y+A ETIP +E + K + E W++ + + G +
Sbjct: 180 YVAFETIPLLEEIEGVRKSMGEVENSNGGTAGSKPFWITCVFPGEGNCLPGGSSVQQIMQ 239
Query: 476 CLLANPDQIQ---AIGVNCVRPSHVSTLVRCIKQSHPTV----------QTIVYPN---K 519
+L N IG+NC + V +L+ +Q + +VYP+ K
Sbjct: 240 AMLGNKGGSPVPFGIGLNCTKVGKVESLILEFEQEVKALIEKGDVSEWPSLVVYPDGTIK 299
Query: 520 GGVWDSVHMKW--------LDTEDEYSILHYVPQWLEEGV---NIIGGCCEVTSYEIQQM 568
G V+++ W D + + ++L V + + G+ I+GGCC+ T EI ++
Sbjct: 300 GEVYNTSTKVWEIREPPGKEDLQWDEAVLEIVRRARDRGLWEDIIVGGCCKTTPREIGKL 359
Query: 569 RIMIDEFNTK 578
R ID + +
Sbjct: 360 RERIDRLDKE 369
>gi|358396515|gb|EHK45896.1| hypothetical protein TRIATDRAFT_292149 [Trichoderma atroviride IMI
206040]
Length = 342
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 109/264 (41%), Gaps = 43/264 (16%)
Query: 6 KVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
K+K+LDG TS H I PLWSS L ++P ++ +DF D+I ++ Y
Sbjct: 3 KIKILDGGLGTSLEQNHNIIFSSDTPLWSSHLLISDPSTLLQCQKDFGDVPVDVILTATY 62
Query: 65 QANVDNLTKL-------GYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH 117
Q ++ G + L +V++ AK
Sbjct: 63 QVSLHGFANTKTADFPNGIDASQVPQFLETAVKIAEDAKQPA------------------ 104
Query: 118 IETAASIGPYGTVLRDGSEYSGHYVDSMTEAD-LIAWHRPNVEAL-----VRAGVDYLAL 171
A S+GPYG + EYSG Y + D L+AWHR +E V+ V Y+AL
Sbjct: 105 CAIALSVGPYGACMVPSQEYSGRYDAAHDSGDALLAWHRERLEVFGLIKDVKQRVQYIAL 164
Query: 172 ETIPAEKEALALVKLLREFPGQKAWLSF--SC---KDDTHTSHGELISSAVTSCLLANPD 226
ET+P E +++ + L PG L F SC +D G + + L +P
Sbjct: 165 ETVPRLDEVISMRRALSAVPGLFPDLPFWISCLFPNEDESIPDGSSPEDVIRAML--DPS 222
Query: 227 QIQA----IGVNCVRPSHVSTLVR 246
A +G+NC + + +L+R
Sbjct: 223 LAAAVPWGVGINCTKVWKLDSLLR 246
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 58/161 (36%), Gaps = 58/161 (36%)
Query: 265 VKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDF-------------- 309
+K+LDG TS H I PLWSS L ++P ++ +DF
Sbjct: 4 IKILDGGLGTSLEQNHNIIFSSDTPLWSSHLLISDPSTLLQCQKDFGDVPVDVILTATYQ 63
Query: 310 ----------------------IRGHIETAA---------------SIGPYGTVLRDGSE 332
+ +ETA S+GPYG + E
Sbjct: 64 VSLHGFANTKTADFPNGIDASQVPQFLETAVKIAEDAKQPACAIALSVGPYGACMVPSQE 123
Query: 333 YSGHYVDSMTEAD-LIAWHRPNVEAL-----VRAGVDYLAL 367
YSG Y + D L+AWHR +E V+ V Y+AL
Sbjct: 124 YSGRYDAAHDSGDALLAWHRERLEVFGLIKDVKQRVQYIAL 164
>gi|347826545|emb|CCD42242.1| hypothetical protein [Botryotinia fuckeliana]
Length = 369
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 122/304 (40%), Gaps = 43/304 (14%)
Query: 1 MSKICKVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTE----PEACVETHRDFIRAG 55
MS CK+ LLDG T+ H ++ + PLWSS L P+ + T + F+ AG
Sbjct: 1 MSPGCKIHLLDGGLGTTLGDSHQVQFTEKEPLWSSQLLIPTHPHGPKTLLATQKSFVDAG 60
Query: 56 ADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKE------NQTPDINLNK 109
ADI+ ++ YQ + + GY+ H S + DKE DI +
Sbjct: 61 ADILLTATYQTSYEGFGGSGYAVHS-----HSSSNSGKADGDKEEVNGIMRSAVDIASDA 115
Query: 110 TFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD-LIAWHRPNVEALVR----- 163
+ + A S+G YG ++ G EY+G Y D ++ L +WH + R
Sbjct: 116 FSTKKDSNGKIALSLGAYGAIMTPGQEYTGKYDDDHKSSEQLSSWHHERISVFSRDPKCW 175
Query: 164 AGVDYLALETIPAEKEALALVKLLREFPGQKA--------WLSFSCKDDTHTSHGELISS 215
VDY+A ETIP +E + K + E W++ + + G
Sbjct: 176 ERVDYVAFETIPLLEEIEGVRKSMGEVENSNGGTAGSKPFWITCVFPGEGNCLPGGSSVQ 235
Query: 216 AVTSCLLANPDQIQ---AIGVNCVRPSHVSTLVRCIKQSHPTV----------QTIVYPN 262
+ +L N IG+NC + V +L+ +Q + +VYP+
Sbjct: 236 QIMQAMLGNKGGSPVPFGIGLNCTKVGKVESLILEFEQEVKALIEKGDVSEWPSLVVYPD 295
Query: 263 KGVK 266
+K
Sbjct: 296 GTIK 299
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 148/370 (40%), Gaps = 55/370 (14%)
Query: 261 PNKGVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTE----PEACVETHRDFIRGHIE 315
P + LLDG T+ H ++ + PLWSS L P+ + T + F+ +
Sbjct: 3 PGCKIHLLDGGLGTTLGDSHQVQFTEKEPLWSSQLLIPTHPHGPKTLLATQKSFVDAGAD 62
Query: 316 ---TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA---LIK 369
TA Y G H + +AD + V ++R+ VD + K
Sbjct: 63 ILLTATYQTSYEGFGGSGYAVHSHSSSNSGKAD---GDKEEVNGIMRSAVDIASDAFSTK 119
Query: 370 PSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEAD-LIAWHRPNVEALVR-----AGVD 423
+ + A S+G YG ++ G EY+G Y D ++ L +WH + R VD
Sbjct: 120 KDSNGKIALSLGAYGAIMTPGQEYTGKYDDDHKSSEQLSSWHHERISVFSRDPKCWERVD 179
Query: 424 YLALETIPAEKEALALVKLLREFPGQKA--------WLSFSCKDDTHTSHGELISSAVTS 475
Y+A ETIP +E + K + E W++ + + G +
Sbjct: 180 YVAFETIPLLEEIEGVRKSMGEVENSNGGTAGSKPFWITCVFPGEGNCLPGGSSVQQIMQ 239
Query: 476 CLLANPDQIQ---AIGVNCVRPSHVSTLVRCIKQSHPTV----------QTIVYPN---K 519
+L N IG+NC + V +L+ +Q + +VYP+ K
Sbjct: 240 AMLGNKGGSPVPFGIGLNCTKVGKVESLILEFEQEVKALIEKGDVSEWPSLVVYPDGTIK 299
Query: 520 GGVWDSVHMKW--------LDTEDEYSILHYVPQWLEEGV---NIIGGCCEVTSYEIQQM 568
G V+++ W D + + ++L V + + G+ I+GGCC+ T EI ++
Sbjct: 300 GEVYNTSTKVWEIREPPGKEDLQWDEAVLEIVRRARDRGLWKDIIVGGCCKTTPREIGKL 359
Query: 569 RIMIDEFNTK 578
R ID + +
Sbjct: 360 RERIDRLDKE 369
>gi|156057753|ref|XP_001594800.1| hypothetical protein SS1G_04608 [Sclerotinia sclerotiorum 1980]
gi|154702393|gb|EDO02132.1| hypothetical protein SS1G_04608 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 369
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 114/281 (40%), Gaps = 49/281 (17%)
Query: 1 MSKICKVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTE----PEACVETHRDFIRAG 55
MS CK+ LLDG T+ H ++ + PLWSS L P + T + F+ AG
Sbjct: 1 MSSECKIHLLDGGLGTTLGDSHQVQFTEKEPLWSSQLLIPTHPHGPNTLLATQKSFVDAG 60
Query: 56 ADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKE------NQTPDINLNK 109
ADI+ ++ YQA+ + + GY+ H S DKE DI N
Sbjct: 61 ADILLTATYQASYEGFGRSGYAVHS-----HSSSGFEKEDGDKEEVNEIMRSAVDIASNA 115
Query: 110 TFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD-LIAWHRPNVEALVR----- 163
+ + A S+G YG ++ G EY+G Y D ++ L +WH + R
Sbjct: 116 FSVKKDSNGKIALSLGAYGAIMTPGQEYTGKYDDQHKSSEHLSSWHHERISVFSRDPKSW 175
Query: 164 AGVDYLALETIPAEKEALALVKLLRE-------------------FPGQKAWLSFSCKDD 204
VDY+A ETIP +E + K + E FPG+ L
Sbjct: 176 DRVDYVAFETIPLLEEIEGVRKSMGEIERSNGGKTGSKPFWVTCVFPGEGNGLP------ 229
Query: 205 THTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
S + I A+ S +P +G+NC + V L+
Sbjct: 230 -DGSSVQQIVQAMLSKKEGSPVPF-GVGLNCTKVGKVEALI 268
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 147/371 (39%), Gaps = 71/371 (19%)
Query: 265 VKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTE----PEACVETHRDFIRGHIE---T 316
+ LLDG T+ H ++ + PLWSS L P + T + F+ + T
Sbjct: 7 IHLLDGGLGTTLGDSHQVQFTEKEPLWSSQLLIPTHPHGPNTLLATQKSFVDAGADILLT 66
Query: 317 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA---LIKPSIS 373
A Y R G H + D + V ++R+ VD + +K +
Sbjct: 67 ATYQASYEGFGRSGYAVHSHSSSGFEKED---GDKEEVNEIMRSAVDIASNAFSVKKDSN 123
Query: 374 SQTAASIGPYGTVLRDGSEYSGHYVDSMTEAD-LIAWHRPNVEALVR-----AGVDYLAL 427
+ A S+G YG ++ G EY+G Y D ++ L +WH + R VDY+A
Sbjct: 124 GKIALSLGAYGAIMTPGQEYTGKYDDQHKSSEHLSSWHHERISVFSRDPKSWDRVDYVAF 183
Query: 428 ETIPAEKEALALVKLLRE-------------------FPGQKAWLSFSCKDDTHTSHGEL 468
ETIP +E + K + E FPG+ L S +
Sbjct: 184 ETIPLLEEIEGVRKSMGEIERSNGGKTGSKPFWVTCVFPGEGNGLP-------DGSSVQQ 236
Query: 469 ISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTV----------QTIVYPN 518
I A+ S +P +G+NC + V L+ ++ ++ +VYP+
Sbjct: 237 IVQAMLSKKEGSPVPF-GVGLNCTKVGKVEALILDFEREVRSLIEKGDVSEWPSLVVYPD 295
Query: 519 ---KGGVWDSVHMKW--------LDTEDEYSILHYVPQWLEEGV---NIIGGCCEVTSYE 564
KG V+++ W D + + ++L V + + G+ I+GGCC+ T E
Sbjct: 296 GTIKGEVYNTSTKVWEIREPPGKEDLQWDEAVLEIVRRTRDRGLWKEIIVGGCCKTTPRE 355
Query: 565 IQQMRIMIDEF 575
I ++R ID
Sbjct: 356 IGKLRERIDRL 366
>gi|390363866|ref|XP_001180979.2| PREDICTED: homocysteine S-methyltransferase ybgG-like
[Strongylocentrotus purpuratus]
Length = 259
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 97/205 (47%), Gaps = 35/205 (17%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMT-EAD-----LIAWHRPNVEALVRAGVDYLALETI 430
A S+GPYG L D SEY G+YVD+MT E D + N AL +A + +L
Sbjct: 78 AGSVGPYGACLLDFSEYHGNYVDNMTMETDKDPLWTSTYLLKNHNALRKAHLSFLE---- 133
Query: 431 PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490
G L+ + +D +H HGE + AV+ ++ Q+ +G N
Sbjct: 134 ----------------HGADVILTGTYQDKSHIGHGESFAEAVSK--VSACSQVVGVGTN 175
Query: 491 CVRPSHVSTLVRCIKQSHPTVQTIVYPNKGG---VWDSVHMKWLDTEDEYSILHYVPQWL 547
C+ +V+ L++ S +VYPN G + DSV K DE+ L +P W+
Sbjct: 176 CIAAENVTALLQSASTSRNGKPFVVYPNAPGEQWIDDSVCGK--TAADEFDDL--IPAWI 231
Query: 548 EEGVNIIGGCCEVTSYEIQQMRIMI 572
E GV IGGCC ++ +I+ + ++
Sbjct: 232 EAGVKYIGGCCGTSALDIKHIANLL 256
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 31/177 (17%)
Query: 121 AASIGPYGTVLRDGSEYSGHYVDSMT-EAD-----LIAWHRPNVEALVRAGVDYLALETI 174
A S+GPYG L D SEY G+YVD+MT E D + N AL +A + +L
Sbjct: 78 AGSVGPYGACLLDFSEYHGNYVDNMTMETDKDPLWTSTYLLKNHNALRKAHLSFLE---- 133
Query: 175 PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 234
G L+ + +D +H HGE + AV+ ++ Q+ +G N
Sbjct: 134 ----------------HGADVILTGTYQDKSHIGHGESFAEAVSK--VSACSQVVGVGTN 175
Query: 235 CVRPSHVSTLVRCIKQSHPTVQTIVYPNK-GVKLLDGSFTSQVSRHTIKDVDGHPLW 290
C+ +V+ L++ S +VYPN G + +D S + + D+ P W
Sbjct: 176 CIAAENVTALLQSASTSRNGKPFVVYPNAPGEQWIDDSVCGKTAADEFDDL--IPAW 230
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 20/26 (76%)
Query: 317 AASIGPYGTVLRDGSEYSGHYVDSMT 342
A S+GPYG L D SEY G+YVD+MT
Sbjct: 78 AGSVGPYGACLLDFSEYHGNYVDNMT 103
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
G++ ++ T KD PLW+S YL A + H F+ GAD+I + YQ
Sbjct: 96 GNYVDNMTMETDKD----PLWTSTYLLKNHNALRKAHLSFLEHGADVILTGTYQ 145
>gi|358381330|gb|EHK19006.1| hypothetical protein TRIVIDRAFT_44209 [Trichoderma virens Gv29-8]
Length = 348
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 108/261 (41%), Gaps = 39/261 (14%)
Query: 7 VKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
V LDG TS ++I PLWSS L ++P + +DF D+I ++ YQ
Sbjct: 10 VSFLDGGLGTSLEQNYSIAFGPDTPLWSSHLLISDPSTLLRCQKDFGDVPVDMILTATYQ 69
Query: 66 ANVDNLTKL-------GYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHI 118
++ G + ++ L +V + AK +
Sbjct: 70 VSLHGFAGTKTAEFSDGIAPEQVPRFLETAVHIAEQAKQPSSA----------------- 112
Query: 119 ETAASIGPYGTVLRDGSEYSGHYVDSMTEAD-LIAWHRPNVEAL-----VRAGVDYLALE 172
A SIGPYG + EYSG Y + D L AWHR +E VR V Y+ALE
Sbjct: 113 -VALSIGPYGACMIPSQEYSGKYDAAYDSGDALFAWHRERMEVFASIKDVRQRVRYIALE 171
Query: 173 TIPAEKEALALVKLLREFPGQKAWLSF--SC---KDDTHTSHGELISSAVTSCLLAN--P 225
T+P E +A+ + + PG + + F SC +D G + + + L + P
Sbjct: 172 TVPRLDEVIAMRRAMSAVPGLSSGVPFWISCLFPNEDEKIPDGSSPEAVIRAMLDPSIAP 231
Query: 226 DQIQAIGVNCVRPSHVSTLVR 246
+G+NC + + +L+R
Sbjct: 232 AVPWGVGINCTKVWKLESLLR 252
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 142/346 (41%), Gaps = 53/346 (15%)
Query: 265 VKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
V LDG TS ++I PLWSS L ++P + +DF G + P
Sbjct: 10 VSFLDGGLGTSLEQNYSIAFGPDTPLWSSHLLISDPSTLLRCQKDF--GDV-------PV 60
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRP-NVEALVRAGVDYLALIKPSISSQTAASIGP 382
+L + S H A+ P V + V ++A SS A SIGP
Sbjct: 61 DMILTATYQVSLHGFAGTKTAEFSDGIAPEQVPRFLETAV-HIAEQAKQPSSAVALSIGP 119
Query: 383 YGTVLRDGSEYSGHYVDSMTEAD-LIAWHRPNVEAL-----VRAGVDYLALETIPAEKEA 436
YG + EYSG Y + D L AWHR +E VR V Y+ALET+P E
Sbjct: 120 YGACMIPSQEYSGKYDAAYDSGDALFAWHRERMEVFASIKDVRQRVRYIALETVPRLDEV 179
Query: 437 LALVKLLREFPGQKAWLSF--SC---KDDTHTSHGELISSAVTSCLLAN--PDQIQAIGV 489
+A+ + + PG + + F SC +D G + + + L + P +G+
Sbjct: 180 IAMRRAMSAVPGLSSGVPFWISCLFPNEDEKIPDGSSPEAVIRAMLDPSIAPAVPWGVGI 239
Query: 490 NCVRPSHVSTLVR------------CIKQSHPTVQTIVYPN--KGGVWDSVHMKW---LD 532
NC + + +L+R + + P + ++YP+ G V+++ W
Sbjct: 240 NCTKVWKLESLLRRYEAGVSQLLQEGLVEKWPAL--VLYPDGTNGEVYNTTTKTWELPQG 297
Query: 533 TEDEYSI-----LHYVPQWLEEGVN----IIGGCCEVTSYEIQQMR 569
TE + I L V + E I+GGCC +IQ++R
Sbjct: 298 TEQKDRIPWETQLAEVIRAAEARGKWSHIIVGGCCRARPSDIQKLR 343
>gi|410084361|ref|XP_003959757.1| hypothetical protein KAFR_0L00150 [Kazachstania africana CBS 2517]
gi|372466350|emb|CCF60622.1| hypothetical protein KAFR_0L00150 [Kazachstania africana CBS 2517]
Length = 326
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 7/196 (3%)
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEA 436
SIG YG ++ G EYSG Y DS D ++ +P ++ + +D + ETI E
Sbjct: 124 GSIGSYGALV--GGEYSGDYGDSPETVDFYSYFKPQLDNFLNNDEIDIVGFETIANFTEL 181
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIGVNCVR 493
+L+ + + ++S S D+ + G LI+ + S A + +GVNCV
Sbjct: 182 KSLLSWDEKKVSKPFYISLSVHDNGNLRDGTPMHLITDYIKSLATAINPNLTFLGVNCVN 241
Query: 494 PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWL-DTEDEYSILHYVPQWLEEGVN 552
+ + ++ I PT+ V+PN G V++ W + E S V +++ GV
Sbjct: 242 YNKATEIIDSIHNGLPTMPLSVFPNSGEVFNVEKGIWTANPEAAASWEAVVKRFISSGVR 301
Query: 553 IIGGCCEVTSYEIQQM 568
I+GGCC ++I+Q+
Sbjct: 302 IVGGCCRTRPHDIEQI 317
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 22/219 (10%)
Query: 50 DFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNK 109
DF+ AGA+I+ ++ YQ + ++ E+ +L KS++ N DK +
Sbjct: 68 DFVNAGAEILMTTTYQTSFKAVS-------ESTEL--KSLREYNELLDKI-------VGF 111
Query: 110 TFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDY 168
T + + SIG YG ++ G EYSG Y DS D ++ +P ++ + +D
Sbjct: 112 TRACIGDNRYLIGSIGSYGALV--GGEYSGDYGDSPETVDFYSYFKPQLDNFLNNDEIDI 169
Query: 169 LALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANP 225
+ ETI E +L+ + + ++S S D+ + G LI+ + S A
Sbjct: 170 VGFETIANFTELKSLLSWDEKKVSKPFYISLSVHDNGNLRDGTPMHLITDYIKSLATAIN 229
Query: 226 DQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+ +GVNCV + + ++ I PT+ V+PN G
Sbjct: 230 PNLTFLGVNCVNYNKATEIIDSIHNGLPTMPLSVFPNSG 268
>gi|389741687|gb|EIM82875.1| Homocysteine S-methyltransferase [Stereum hirsutum FP-91666 SS1]
Length = 395
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 121/324 (37%), Gaps = 78/324 (24%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG + + KD+ PLWS+ ++ EPE VE H F+RAGA II +S YQ
Sbjct: 17 VLDGGLGTTLEDVFHKDIS-TPLWSARHIDKEPEVLVEAHLAFLRAGARIILTSTYQCTY 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ GYS E L K+V L + A+ + + D + G ++ A S+GPYG
Sbjct: 76 ETFAAAGYSRAEGERLTRKAVHLASEARKRFVEESDGAVK------IGDVKVALSMGPYG 129
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG----------------------- 165
G EY G Y A PN A A
Sbjct: 130 VTCSPGQEYGGFYPPPFGPQAYSA-SGPNTNAFAAADQTKRSMSIDALTDFHLQRLRIHS 188
Query: 166 --------VDYLALETIPAEKEALALVKLLR-----------EFPGQKAWLSFSCKDDT- 205
+D +A ETIP +E A+ +R F + W+S D
Sbjct: 189 NDLDSWKEIDLVAFETIPLAREIKAIRGAMRLLQIELEPRPAGFEWKPWWISTVWPDGRF 248
Query: 206 --HTSHGEL---ISSAVTSCLLANPD-----------QIQAIGVNCVRPSHVSTLVRCI- 248
+ G+ + V + L P Q IG+NC +H+ ++ +
Sbjct: 249 PHESGPGKRRLSVKEVVFTLLHEEPKMASQSIDHYEVQPDGIGINCTSMAHLQDVLTGME 308
Query: 249 --------KQSHPTVQTIVYPNKG 264
K+ P + ++YPN G
Sbjct: 309 EVVGDLWRKKQGPWL--VLYPNGG 330
>gi|170112416|ref|XP_001887410.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164637736|gb|EDR02019.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 418
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 124/295 (42%), Gaps = 67/295 (22%)
Query: 30 PLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSV 89
PLWS+ T+PE + H F+ AG+ +I +S YQ + + GY E +A+ L++KSV
Sbjct: 66 PLWSATLTETDPETVIAAHLAFLEAGSLVIMTSTYQRAFETFERAGYGEADAVTLMNKSV 125
Query: 90 QLMNSAKDKE-NQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHY------- 141
+L + AK + Q P I +I+ A ++GP+G L E+SG+Y
Sbjct: 126 ELASEAKSRFLAQNPSITAT--------YIKIALALGPFGATLTTAQEFSGYYPPPYGPQ 177
Query: 142 --------------------VDSMTEADLIAWHRPNVEALVRAG----VDYLALETIPAE 177
+++ L ++H + VD + ET+P
Sbjct: 178 EFTPDLDGTNTNAFSAEESEAEAVAVDSLASFHLRRLRVFCNHPSWDLVDVIVFETVPLV 237
Query: 178 KEALAL---VKLLREFPGQKAWLSFSCKDDTHTSH----GE-LISSAVTSCLL-----AN 224
+E A+ V +L EF + W++ D GE L+++ V LL AN
Sbjct: 238 REIAAIRRAVGMLPEFAMKSWWVATVWLDGVFLQESVPGGERLLAADVVDALLRDASPAN 297
Query: 225 PDQIQAIGVNCVRPSHVSTLVRCIKQSHPTV-------------QTIVYPNKGVK 266
P IGVNC + + +++ + + + + +VY N GVK
Sbjct: 298 PVP-TGIGVNCTQIEYYPEIIQAHRIAFNALLLSQVGDSKFARPRLVVYSNGGVK 351
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 136/358 (37%), Gaps = 89/358 (24%)
Query: 288 PLWSSVYLTTEPEACVETHRDFIRGH---IETAASIGPYGTVLRDGSEYSGHYVDSMTEA 344
PLWS+ T+PE + H F+ I T+ + T R G EA
Sbjct: 66 PLWSATLTETDPETVIAAHLAFLEAGSLVIMTSTYQRAFETFERAG----------YGEA 115
Query: 345 DLIAWHRPNVEALVRAGVDYLALIKPSISS---QTAASIGPYGTVLRDGSEYSGHY---- 397
D + +VE A +LA PSI++ + A ++GP+G L E+SG+Y
Sbjct: 116 DAVTLMNKSVELASEAKSRFLAQ-NPSITATYIKIALALGPFGATLTTAQEFSGYYPPPY 174
Query: 398 -----------------------VDSMTEADLIAWHRPNVEALVRAG----VDYLALETI 430
+++ L ++H + VD + ET+
Sbjct: 175 GPQEFTPDLDGTNTNAFSAEESEAEAVAVDSLASFHLRRLRVFCNHPSWDLVDVIVFETV 234
Query: 431 PAEKEALAL---VKLLREFPGQKAWLSFSCKDDTHTSH----GE-LISSAVTSCLL---- 478
P +E A+ V +L EF + W++ D GE L+++ V LL
Sbjct: 235 PLVREIAAIRRAVGMLPEFAMKSWWVATVWLDGVFLQESVPGGERLLAADVVDALLRDAS 294
Query: 479 -ANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTV-------------QTIVYPNKGGVWD 524
ANP IGVNC + + +++ + + + + +VY N G +D
Sbjct: 295 PANPVP-TGIGVNCTQIEYYPEIIQAHRIAFNALLLSQVGDSKFARPRLVVYSNGGVKYD 353
Query: 525 SVHMKWLDTEDEYSILHYVPQWLEEGVN--------------IIGGCCEVTSYEIQQM 568
+ WLD+ + QW++E V+ ++GGCC+ +I +
Sbjct: 354 PIAHVWLDSGVAHRGGTGKAQWVKELVSLAKEEGKFGSWAGIVVGGCCKTAPDDIHAL 411
>gi|403419403|emb|CCM06103.1| predicted protein [Fibroporia radiculosa]
Length = 400
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 137/342 (40%), Gaps = 79/342 (23%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG + + +D+ PLWS+ + +PE + H F+ AGA +I ++ YQ
Sbjct: 22 VMVLDGGLGTTLEDTFQRDIS-TPLWSAKPIEDDPEVVIAAHLAFLHAGAQVILTATYQC 80
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK---ENQTPDINLNKTFNLLTGHIETAAS 123
+ GY++++A+ ++ ++VQL A+ + E D N I+ A S
Sbjct: 81 AFGTFKRAGYTQEDAVRIMRRAVQLAAEARRRFISEQNGSDQRENLK------DIKIALS 134
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAW------------HRPNVEALVRA------- 164
+GP+G L E+ G Y + +A R + V A
Sbjct: 135 LGPFGGTLSPTQEFDGCYPPPYGPKEFVAGGANQNAFDDSEEGRAKEQVAVDALNSFHLE 194
Query: 165 -------------GVDYLALETIPAEKEALALVKLLREFPGQ--------KAWLSFSC-- 201
+DYLA ET+P ++EA+A+ K ++ G+ K W +
Sbjct: 195 RLRMFSEDPETWTAIDYLAFETVPLKREAVAIRKAMQALNGELGRDGKNTKPWWITTVWP 254
Query: 202 -----KDDTHTSH----GELISSAVTS------CLLANPDQIQAIGVNCVRPSHVSTLVR 246
++ H GE++ + V S L P IG+NC P + L+
Sbjct: 255 EGKLPEERRHGGEKVQIGEIVEATVQSTGEQQGVYLGVP---WGIGINCTDPQFLDQLLT 311
Query: 247 ----CIKQSHP-----TVQTIVYPNKGVKLLDGSFTSQVSRH 279
+++ H + + YPN+GV G+ T +R
Sbjct: 312 ELTDAVEKIHGRDNGCAIWLVAYPNRGVVYDIGTRTWTQTRE 353
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 145/387 (37%), Gaps = 97/387 (25%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIG 321
V +LDG + + +D+ PLWS+ + +PE + H F+ I TA
Sbjct: 22 VMVLDGGLGTTLEDTFQRDIS-TPLWSAKPIEDDPEVVIAAHLAFLHAGAQVILTATYQC 80
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT----- 376
+GT R G T+ D + R V+ A +++ S +
Sbjct: 81 AFGTFKRAG----------YTQEDAVRIMRRAVQLAAEARRRFISEQNGSDQRENLKDIK 130
Query: 377 -AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWH------------RPNVEALVRA--- 420
A S+GP+G L E+ G Y + +A R + V A
Sbjct: 131 IALSLGPFGGTLSPTQEFDGCYPPPYGPKEFVAGGANQNAFDDSEEGRAKEQVAVDALNS 190
Query: 421 -----------------GVDYLALETIPAEKEALALVKLLREFPGQ--------KAWLSF 455
+DYLA ET+P ++EA+A+ K ++ G+ K W
Sbjct: 191 FHLERLRMFSEDPETWTAIDYLAFETVPLKREAVAIRKAMQALNGELGRDGKNTKPWWIT 250
Query: 456 SC-------KDDTHTSH----GELISSAVTS------CLLANPDQIQAIGVNCVRPSHVS 498
+ ++ H GE++ + V S L P IG+NC P +
Sbjct: 251 TVWPEGKLPEERRHGGEKVQIGEIVEATVQSTGEQQGVYLGVP---WGIGINCTDPQFLD 307
Query: 499 TLVR----CIKQSHP-----TVQTIVYPNKGGVWDSVHMKWLDTED---EYSI--LHYVP 544
L+ +++ H + + YPN+G V+D W T + E++I
Sbjct: 308 QLLTELTDAVEKIHGRDNGCAIWLVAYPNRGVVYDIGTRTWTQTREDGNEWAIRLADVTA 367
Query: 545 QWLEEGV---NIIGGCCEVTSYEIQQM 568
+ ++ G+ ++GGCC+ EI ++
Sbjct: 368 RQMQRGIWKGLLVGGCCKTGPEEIVKL 394
>gi|307193333|gb|EFN76195.1| Homocysteine S-methyltransferase [Harpegnathos saltator]
Length = 339
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 112/240 (46%), Gaps = 18/240 (7%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGH---PLWSSVYLTTEPEACVETHRDFIRAGADIIQSS 62
++K +DG F +Q+ + K + PL + T A H DF+ AGA II+++
Sbjct: 7 EIKTIDGDFVAQLCCNLKKQANFEAVDPLVDIRIIQTNRYAIYRVHLDFLHAGATIIRTN 66
Query: 63 CYQANVDNLTKLG------YSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG 116
+ + L+K+ Y + A+ L K+V + Q+P+I ++ + G
Sbjct: 67 TARISEAALSKINSNKSVRYFIKNAVLLARKAVCKYYKETRGDMQSPEI-YDRNRPQIAG 125
Query: 117 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA 176
+ + R G + Y + ++ +++ HR + L++AGVD LA+E I
Sbjct: 126 YCTNFLK-----SCFRKGLPFD--YWNEVSREEMLKLHRLRIRELLKAGVDMLAIEDIHN 178
Query: 177 EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA-NPDQIQAIGVNC 235
E +V++LR + K W+SF+C +D G L+ A+ C + + QI AIG C
Sbjct: 179 MVELKIIVEVLRRYKSAKVWISFTCLNDVELFDGSLLLDAIKHCRRSLHSGQIIAIGAKC 238
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 101/245 (41%), Gaps = 28/245 (11%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGH---PLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
K +K +DG F +Q+ + K + PL + T A H DF+
Sbjct: 6 KEIKTIDGDFVAQLCCNLKKQANFEAVDPLVDIRIIQTNRYAIYRVHLDFLHAG------ 59
Query: 320 IGPYGTVLR-DGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGV-DYLA-----LIKPSI 372
T++R + + S + + + + N L R V Y + P I
Sbjct: 60 ----ATIIRTNTARISEAALSKINSNKSVRYFIKNAVLLARKAVCKYYKETRGDMQSPEI 115
Query: 373 SSQTAASIGPYGT-----VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ I Y T R G + Y + ++ +++ HR + L++AGVD LA+
Sbjct: 116 YDRNRPQIAGYCTNFLKSCFRKGLPFD--YWNEVSREEMLKLHRLRIRELLKAGVDMLAI 173
Query: 428 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA-NPDQIQA 486
E I E +V++LR + K W+SF+C +D G L+ A+ C + + QI A
Sbjct: 174 EDIHNMVELKIIVEVLRRYKSAKVWISFTCLNDVELFDGSLLLDAIKHCRRSLHSGQIIA 233
Query: 487 IGVNC 491
IG C
Sbjct: 234 IGAKC 238
>gi|385305570|gb|EIF49534.1| homocysteine s-methyltransferase [Dekkera bruxellensis AWRI1499]
Length = 254
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 116/245 (47%), Gaps = 29/245 (11%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG+ +++ +H + D LWS + + +EP E D++ G+++I+++ YQ
Sbjct: 12 LLDGATGTELEKHGVSLND--KLWSGIAVISEPXKLEEVXLDYLNCGSELIETATYQLTK 69
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
L K + + K++ + +SA+ K F SIGP+G
Sbjct: 70 KGLIK---HDLDPHSTYQKAIDIADSARQKH-----------FEKTGKKAMIVGSIGPFG 115
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEALALVKLL 187
L DG+E++GHY + E ++ A+H ++ L + VD + ETIP+ +E ++++++
Sbjct: 116 AYLADGAEFTGHYPEIXNE-EMKAFHSDRLDYLYNSPLVDLIGFETIPSFEEVKSILEMM 174
Query: 188 RE---------FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC--V 236
+ P + +L+ SC + + G L+ + + + A+G NC +
Sbjct: 175 KTKLDEAKKAGKPYKPYYLALSCSPEMVLADGSLLHKVLEYINGHLEENLVAVGANCCGL 234
Query: 237 RPSHV 241
R S V
Sbjct: 235 RTSKV 239
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 115/259 (44%), Gaps = 39/259 (15%)
Query: 257 TIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH--- 313
T +P LLDG+ +++ +H + D LWS + + +EP E D++
Sbjct: 2 TFKFPKNKPLLLDGATGTELEKHGVSLND--KLWSGIAVISEPXKLEEVXLDYLNCGSEL 59
Query: 314 IETAA-SIGPYGTVLRDGSEYSGHY--VDSMTEADLIAWHRPNVEALVRAGVDYLALIKP 370
IETA + G + D +S + +D A + + +A++
Sbjct: 60 IETATYQLTKKGLIKHDLDPHSTYQKAIDIADSARQKHFEKTGKKAMI------------ 107
Query: 371 SISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALET 429
SIGP+G L DG+E++GHY + E ++ A+H ++ L + VD + ET
Sbjct: 108 ------VGSIGPFGAYLADGAEFTGHYPEIXNE-EMKAFHSDRLDYLYNSPLVDLIGFET 160
Query: 430 IPAEKEALALVKLLRE---------FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN 480
IP+ +E +++++++ P + +L+ SC + + G L+ +
Sbjct: 161 IPSFEEVKSILEMMKTKLDEAKKAGKPYKPYYLALSCSPEMVLADGSLLHKVLEYINGHL 220
Query: 481 PDQIQAIGVNC--VRPSHV 497
+ + A+G NC +R S V
Sbjct: 221 EENLVAVGANCCGLRTSKV 239
>gi|121719378|ref|XP_001276388.1| homocysteine S-methyltransferase, putative [Aspergillus clavatus
NRRL 1]
gi|119404586|gb|EAW14962.1| homocysteine S-methyltransferase, putative [Aspergillus clavatus
NRRL 1]
Length = 342
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 110/272 (40%), Gaps = 56/272 (20%)
Query: 4 ICKVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSS 62
+ +++LDG TS +H + PLW+S L ++P + R+FI A D++ ++
Sbjct: 1 MASIEILDGGLGTSLQDQHGVTFDSSTPLWASHLLVSDPTTLLACQRNFINADTDVLLTA 60
Query: 63 CYQANVDNLTK-------LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLT 115
YQ +++ + G L ++ + AK N T I L
Sbjct: 61 TYQVSIEGFERTKTVDYPTGIPRNAIAKYLRTAIDIAEQAKG--NSTAKIAL-------- 110
Query: 116 GHIETAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAG------VDY 168
S+GPYG + G EYSG Y + TE L WH + A V Y
Sbjct: 111 -------SLGPYGACMIPGQEYSGKYDAEHDTEEKLFQWHLERLRLFQEADERLSERVQY 163
Query: 169 LALETIPAEKEALALVKLLRE------------FPGQKAWLSFSCKDDTHTSHGELISSA 216
+A ET+P E A+ + + FPG++A L G +
Sbjct: 164 VAFETLPRLDEIRAVKRAIHAAGLNVPFWVACVFPGEQAAL----------PDGSSVEEV 213
Query: 217 VTSCLLANPDQI--QAIGVNCVRPSHVSTLVR 246
VT+ L PDQ IG+NC + ++ L+R
Sbjct: 214 VTAALAEMPDQSVPWGIGINCTKIHKLNGLMR 245
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 147/352 (41%), Gaps = 68/352 (19%)
Query: 265 VKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
+++LDG TS +H + PLW+S L ++P + R+FI + +T +
Sbjct: 4 IEILDGGLGTSLQDQHGVTFDSSTPLWASHLLVSDPTTLLACQRNFI--NADTDVLLTAT 61
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPY 383
V +G E + VD T R + +R +D K + +++ A S+GPY
Sbjct: 62 YQVSIEGFERT-KTVDYPT-----GIPRNAIAKYLRTAIDIAEQAKGNSTAKIALSLGPY 115
Query: 384 GTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAG------VDYLALETIPAEKEA 436
G + G EYSG Y + TE L WH + A V Y+A ET+P E
Sbjct: 116 GACMIPGQEYSGKYDAEHDTEEKLFQWHLERLRLFQEADERLSERVQYVAFETLPRLDEI 175
Query: 437 LALVKLLRE------------FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 484
A+ + + FPG++A L G + VT+ L PDQ
Sbjct: 176 RAVKRAIHAAGLNVPFWVACVFPGEQAAL----------PDGSSVEEVVTAALAEMPDQS 225
Query: 485 --QAIGVNCVRPSHVSTLVRCIKQSHP---------TVQTIV-YPN--KGGVWDSVHMKW 530
IG+NC + ++ L+R + TV T+V YP+ G V+++ W
Sbjct: 226 VPWGIGINCTKIHKLNGLMRNFGEKIASAMAAGRVSTVPTLVLYPDGTNGEVYNTTTQTW 285
Query: 531 LDTEDEYSILHYVPQWLEE--------GVN------IIGGCCEVTSYEIQQM 568
E Y+ P W ++ G N ++GGCC+ + +I+++
Sbjct: 286 EKPEG-YTNDDARP-WEKQLGQIVNDAGANGPFTSFLVGGCCKASHNDIRKL 335
>gi|365987512|ref|XP_003670587.1| hypothetical protein NDAI_0F00250 [Naumovozyma dairenensis CBS 421]
gi|343769358|emb|CCD25344.1| hypothetical protein NDAI_0F00250 [Naumovozyma dairenensis CBS 421]
Length = 329
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 143/336 (42%), Gaps = 40/336 (11%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP----------EACVETHRDFIRG 312
K + +LDG +++ I +P+WS++ + E + DF+
Sbjct: 15 KKILILDGGQGTELENRGINV--ANPVWSTIPFVNDSFWSGQSSKDREIVKQMFNDFLEA 72
Query: 313 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSI 372
E + Y T + SE + + ++ E D + N YL
Sbjct: 73 GAEILMTTT-YQTSFKSVSENTN--IKTLKEYDELLTRIVNFSRDCIGENKYLI------ 123
Query: 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIP 431
IGP+G + SE++G+Y + D + +P + V+ +D + ETIP
Sbjct: 124 -----GCIGPWGAHI--CSEFTGNYGEHPELIDYYEYFKPQLVNFVQNDDLDIIGFETIP 176
Query: 432 AEKEALALVKLLREFPGQKAWLSFSC------KDDTHTSHGELISSAVTSCLLANPDQIQ 485
E ++ + + ++ S +D T S I ++++ L NP+ +
Sbjct: 177 NVYELKTILSWGTDILPKPFYIGLSVHENGVLRDGTTMSQVADIINSLSDKL--NPNLV- 233
Query: 486 AIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDE--YSILHYV 543
+G+NCV +H ++ I + P + IVYPN G V+D+V WL DE S V
Sbjct: 234 LLGINCVSLAHSPDILDSIHSNLPDLPLIVYPNSGEVYDTVKKIWLPPNDETYMSWDEVV 293
Query: 544 PQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEFNTKK 579
++L+ G IIGGCC T +I+Q+ + +++ K
Sbjct: 294 ERYLKAGARIIGGCCRTTPNDIKQISDAVHKYSNTK 329
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 120/276 (43%), Gaps = 40/276 (14%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP----------EACVETHRDFIRAG 55
K+ +LDG +++ I +P+WS++ + E + DF+ AG
Sbjct: 16 KILILDGGQGTELENRGINV--ANPVWSTIPFVNDSFWSGQSSKDREIVKQMFNDFLEAG 73
Query: 56 ADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLT 115
A+I+ ++ YQ + ++ SE + L + +L+ +N + + +
Sbjct: 74 AEILMTTTYQTSFKSV-----SENTNIKTLKEYDELLTRI-----------VNFSRDCIG 117
Query: 116 GHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETI 174
+ IGP+G + SE++G+Y + D + +P + V+ +D + ETI
Sbjct: 118 ENKYLIGCIGPWGAHI--CSEFTGNYGEHPELIDYYEYFKPQLVNFVQNDDLDIIGFETI 175
Query: 175 PAEKEALALVKLLREFPGQKAWLSFSC------KDDTHTSHGELISSAVTSCLLANPDQI 228
P E ++ + + ++ S +D T S I ++++ L NP+ +
Sbjct: 176 PNVYELKTILSWGTDILPKPFYIGLSVHENGVLRDGTTMSQVADIINSLSDKL--NPNLV 233
Query: 229 QAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+G+NCV +H ++ I + P + IVYPN G
Sbjct: 234 -LLGINCVSLAHSPDILDSIHSNLPDLPLIVYPNSG 268
>gi|317497248|ref|ZP_07955572.1| homocysteine methyltransferase [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895493|gb|EFV17651.1| homocysteine methyltransferase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 199
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 3/157 (1%)
Query: 419 RAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLL 478
+AG D + ET+P+ KEA ++ E+ G W+SFSC + G I+ +
Sbjct: 41 KAGADIILFETVPSLKEAKVEAEIAEEY-GYDYWISFSCLSENIICEGTPIAECAKTFAK 99
Query: 479 ANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYS 538
P ++ IGVNC +P ++ L+ IK++ + VYPN G +D+V W + S
Sbjct: 100 GYP-HLKMIGVNCTKPEYIVGLIHKIKEN-CDIPIGVYPNSGEEYDAVKKVWFGKQSALS 157
Query: 539 ILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEF 575
Y +++ G + +GGCC + ++ + +F
Sbjct: 158 FDQYAYNYMKAGASAVGGCCTTVAKHVEDVVRAKKQF 194
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Query: 163 RAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLL 222
+AG D + ET+P+ KEA ++ E+ G W+SFSC + G I+ +
Sbjct: 41 KAGADIILFETVPSLKEAKVEAEIAEEY-GYDYWISFSCLSENIICEGTPIAECAKTFAK 99
Query: 223 ANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
P ++ IGVNC +P ++ L+ IK++ + VYPN G
Sbjct: 100 GYP-HLKMIGVNCTKPEYIVGLIHKIKEN-CDIPIGVYPNSG 139
>gi|227505425|ref|ZP_03935474.1| homocysteine methyltransferase [Corynebacterium striatum ATCC 6940]
gi|227197968|gb|EEI78016.1| homocysteine methyltransferase [Corynebacterium striatum ATCC 6940]
Length = 295
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 124/316 (39%), Gaps = 61/316 (19%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRG--HIETAASIGPYG 324
+ DG + + D+ G LWS+ L P H DF R + T AS
Sbjct: 19 IFDGGLGTHLESRG-NDISGQ-LWSAQILRENPAEIQAAHEDFYRAGAQVATTASYQVTF 76
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
L D +E + E +A + + LV AAS+GPYG
Sbjct: 77 DALGDEAE---ELLRRSVEVARVAANNARPDGLV------------------AASVGPYG 115
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
+G++Y G Y + +L WH+ +E L D+L ETIP EA AL++
Sbjct: 116 AGPGEGTDYDGAY--GLGCEELKHWHQRRIEVLAATDADFLLAETIPNVDEAAALLE--- 170
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ-------------AIGVNC 491
+ G+ + +VT L A+P ++ A+GVNC
Sbjct: 171 ----------------LLDATGKPYALSVTGVLAADPAKVAQVIEFAKQARNLGALGVNC 214
Query: 492 VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQWLEEG 550
+V+ +++ + + YPN G WD +W D E ++ PQ G
Sbjct: 215 CDAETAKGVVKRMREG-IDLPVLAYPNSGETWDHAARQWRRDEEHSLGLVEAAPQLRALG 273
Query: 551 VNIIGGCCEVTSYEIQ 566
V ++GGCC T +I+
Sbjct: 274 VTLLGGCCRTTPEQIR 289
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 113/269 (42%), Gaps = 58/269 (21%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+ DG + + D+ G LWS+ L P H DF RAGA + ++ YQ
Sbjct: 19 IFDGGLGTHLESRG-NDISGQ-LWSAQILRENPAEIQAAHEDFYRAGAQVATTASYQVTF 76
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
D L EA +LL +SV++ A + N PD G + AAS+GPYG
Sbjct: 77 DALGD------EAEELLRRSVEVARVAAN--NARPD-----------GLV--AASVGPYG 115
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
+G++Y G Y + +L WH+ +E L D+L ETIP EA AL++
Sbjct: 116 AGPGEGTDYDGAY--GLGCEELKHWHQRRIEVLAATDADFLLAETIPNVDEAAALLE--- 170
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ-------------AIGVNC 235
+ G+ + +VT L A+P ++ A+GVNC
Sbjct: 171 ----------------LLDATGKPYALSVTGVLAADPAKVAQVIEFAKQARNLGALGVNC 214
Query: 236 VRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+V+ +++ + + YPN G
Sbjct: 215 CDAETAKGVVKRMREG-IDLPVLAYPNSG 242
>gi|336275783|ref|XP_003352645.1| hypothetical protein SMAC_01479 [Sordaria macrospora k-hell]
gi|380094535|emb|CCC07915.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 357
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 122/293 (41%), Gaps = 58/293 (19%)
Query: 7 VKLLDGSF-TSQVSRHTIKDVDGHPLWSS-VYLTTEPEACVETHRDFIRAGADIIQSSCY 64
V++LDG T+ H I PLWSS + ++ E + ++ H F +AGA+II ++ Y
Sbjct: 7 VQILDGGLGTTLEDLHGITFSFETPLWSSHLLVSGEEDKLLDCHEAFQKAGANIISTATY 66
Query: 65 QANVDNLTKLGYSEQEALD---------LLHKSVQLMNSAKDKENQTPDINLNKTFNLLT 115
Q +++ + A D L+++V L +A KE +
Sbjct: 67 QTSINGFAATKAPKSGAPDGIGKEGIPHFLNRAVVLAANAAGKEGK-------------- 112
Query: 116 GHIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD-LIAWHRPNVEALVRAG---VDYLAL 171
A ++GPYG + +EYSG Y +A L WH+ ++ V+Y+A
Sbjct: 113 ----VALALGPYGATMIPSTEYSGKYDPGHQDARALEEWHKKRLDLFKDVNTNQVNYIAF 168
Query: 172 ETIPAEKEALALVKLLR------EFPGQKAWL-SFSCKDDTHTSHGELISSAVTSCL--- 221
ET+P E +A+ LL G+ W+ S DD G + V + L
Sbjct: 169 ETVPRLDEIVAIRNLLSTDKIPTSLRGRPVWISSLYPNDDEKLPDGSTVEEVVRAALTRR 228
Query: 222 --LANPDQIQAIGVNCVRPSHVSTLVR--------CIKQSHPT--VQTIVYPN 262
L P IG+NC + + +LVR CI P ++YP+
Sbjct: 229 EGLETP---WGIGINCTKVEKLDSLVRRYEAALQSCIDNGEPMDWPSLVLYPD 278
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 139/346 (40%), Gaps = 51/346 (14%)
Query: 265 VKLLDGSF-TSQVSRHTIKDVDGHPLWSS-VYLTTEPEACVETHRDFIRGHIETAASIGP 322
V++LDG T+ H I PLWSS + ++ E + ++ H F + A+I
Sbjct: 7 VQILDGGLGTTLEDLHGITFSFETPLWSSHLLVSGEEDKLLDCHEAFQK----AGANIIS 62
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
T + ++ D I + + + V LA + A ++GP
Sbjct: 63 TATYQTSINGFAATKAPKSGAPDGIG--KEGIPHFLNRAV-VLAANAAGKEGKVALALGP 119
Query: 383 YGTVLRDGSEYSGHYVDSMTEAD-LIAWHRPNVEALVRAG---VDYLALETIPAEKEALA 438
YG + +EYSG Y +A L WH+ ++ V+Y+A ET+P E +A
Sbjct: 120 YGATMIPSTEYSGKYDPGHQDARALEEWHKKRLDLFKDVNTNQVNYIAFETVPRLDEIVA 179
Query: 439 LVKLLR------EFPGQKAWL-SFSCKDDTHTSHGELISSAVTSCL-----LANPDQIQA 486
+ LL G+ W+ S DD G + V + L L P
Sbjct: 180 IRNLLSTDKIPTSLRGRPVWISSLYPNDDEKLPDGSTVEEVVRAALTRREGLETP---WG 236
Query: 487 IGVNCVRPSHVSTLVR--------CIKQSHPT--VQTIVYPN--KGGVWDSVHMKW---- 530
IG+NC + + +LVR CI P ++YP+ G V+++++ W
Sbjct: 237 IGINCTKVEKLDSLVRRYEAALQSCIDNGEPMDWPSLVLYPDGTNGEVYNTINKTWELPP 296
Query: 531 ----LDTEDEYSILHYVPQWLEEG---VNIIGGCCEVTSYEIQQMR 569
+ E + + V + G I+GGCC+ + I++++
Sbjct: 297 GQKQPEAPWEVILTNVVGAARQRGKWKSIIVGGCCKTSPELIRKLQ 342
>gi|410081184|ref|XP_003958172.1| hypothetical protein KAFR_0F04420 [Kazachstania africana CBS 2517]
gi|372464759|emb|CCF59037.1| hypothetical protein KAFR_0F04420 [Kazachstania africana CBS 2517]
Length = 326
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 13/204 (6%)
Query: 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIP 431
S SIG Y L +EY+G + D+ D + +P ++ R+ +D + ETIP
Sbjct: 119 SKYLVGSIGTYAAYL--SAEYTGDFGDAADTIDYHGYFKPQLDNFNRSTEIDIIGFETIP 176
Query: 432 AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAV------TSCLLANPDQIQ 485
E A++ L ++ + ++S S G + V S L NP+ I
Sbjct: 177 NIHELRAILSLNKKDLSKPFYISLSTNSKAQLRDGTSLKGVVDVIKSFESTL--NPNLI- 233
Query: 486 AIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHY-VP 544
+G+NC+ + + + P IVYPN G +D V WL ED Y V
Sbjct: 234 LLGINCIGLNSSHLTMEYLNNHLPQFPLIVYPNSGEKYDPVRKIWLADEDPAFTWEYIVH 293
Query: 545 QWLEEGVNIIGGCCEVTSYEIQQM 568
++L+ G I+GGCC T +I+ +
Sbjct: 294 RYLDAGARIVGGCCRTTPSDIRSI 317
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 115/278 (41%), Gaps = 40/278 (14%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP----------EACVETHRDFIRAG 55
K+ +LDG +++ + I P+WS++ E + + + DFI AG
Sbjct: 16 KILVLDGGQGTELEKRGINI--SSPVWSTLPFINESFWSNSSSNDRKIIKDMYSDFISAG 73
Query: 56 ADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLT 115
AD++ ++ YQ + ++ SE + L +L+N + I +K
Sbjct: 74 ADVLSTTTYQTSFASI-----SENTNIQTLKDYHELLNRITKFTREC--IGDSKYL---- 122
Query: 116 GHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETI 174
SIG Y L +EY+G + D+ D + +P ++ R+ +D + ETI
Sbjct: 123 -----VGSIGTYAAYL--SAEYTGDFGDAADTIDYHGYFKPQLDNFNRSTEIDIIGFETI 175
Query: 175 PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAV------TSCLLANPDQI 228
P E A++ L ++ + ++S S G + V S L NP+ I
Sbjct: 176 PNIHELRAILSLNKKDLSKPFYISLSTNSKAQLRDGTSLKGVVDVIKSFESTL--NPNLI 233
Query: 229 QAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGVK 266
+G+NC+ + + + P IVYPN G K
Sbjct: 234 -LLGINCIGLNSSHLTMEYLNNHLPQFPLIVYPNSGEK 270
>gi|262183691|ref|ZP_06043112.1| homocysteine methyltransferase [Corynebacterium aurimucosum ATCC
700975]
Length = 225
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
AASIGPYG G++Y G Y + +L WH + L D+L ETIP EA
Sbjct: 37 AASIGPYGAGPGKGTDYDGAY--DLRRGELQRWHARRIAVLADTDADFLLAETIPNVDEA 94
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
AL++LL+ P A ++I A S ++ A+GVNCV PS
Sbjct: 95 AALLELLKAQPKPFALSITGAIAADQAKLSQVIELANQS------SRLGALGVNCVSPSQ 148
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDT-EDEYSILHYVPQWLEEGVNIIG 555
+V ++ + PN G VWD W D S+ Q GV+++G
Sbjct: 149 ARAVVATLRAGTDK-PLLACPNSGEVWDCTAHDWQPAPADAMSLPEAALQLRAAGVSVLG 207
Query: 556 GCCEVTSYEIQQMRIMI 572
GCC V EI+Q+R I
Sbjct: 208 GCCRVGPAEIRQLRRAI 224
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 116 GHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 175
G + AASIGPYG G++Y G Y + +L WH + L D+L ETIP
Sbjct: 32 GDLLVAASIGPYGAGPGKGTDYDGAY--DLRRGELQRWHARRIAVLADTDADFLLAETIP 89
Query: 176 AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 235
EA AL++LL+ P A ++I A S ++ A+GVNC
Sbjct: 90 NVDEAAALLELLKAQPKPFALSITGAIAADQAKLSQVIELANQS------SRLGALGVNC 143
Query: 236 VRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
V PS +V ++ + PN G
Sbjct: 144 VSPSQARAVVATLRAGTDK-PLLACPNSG 171
>gi|302679980|ref|XP_003029672.1| hypothetical protein SCHCODRAFT_58848 [Schizophyllum commune H4-8]
gi|300103362|gb|EFI94769.1| hypothetical protein SCHCODRAFT_58848, partial [Schizophyllum
commune H4-8]
Length = 370
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 123/301 (40%), Gaps = 72/301 (23%)
Query: 25 DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84
DV LWS+ + +P+ ++ H F+RAGAD++ ++ YQ + + GYS+ +A
Sbjct: 11 DVSHTALWSAKPILEQPQVIIDAHLAFLRAGADLLSTATYQCSYRTFERAGYSDADARTA 70
Query: 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHY--- 141
+ ++V+L + A+ K + L+ I+ S+GP+G L EY G Y
Sbjct: 71 MTRAVRLADEARRKYCEESGKALSD--------IKLVLSLGPFGATLSPAQEYDGCYPPP 122
Query: 142 -----------------------------VDSMTEADLIAWHRPNVEALVRAGVDYLALE 172
V ++ + L H + V +D +A E
Sbjct: 123 FGPQAYCTSGENINAFPAGPEGDEAESRAVQALVDFHLERLHVFAADEEVWHAIDIIAFE 182
Query: 173 TIPAEKE----ALALVKLLREFP-GQKA-WLSFSCKDDTHTSH-----------GELISS 215
TIP +E +A+ KL+ G+KA WLS D G+++ S
Sbjct: 183 TIPLLREITAVRVAMAKLVAGVADGRKAWWLSVLFPDGKFPEKRRGEPSVSREVGDIVRS 242
Query: 216 AVTSCL-----LANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTV-------QTIVYPNK 263
A +A PD +GVNC SH S LV ++ + P+ ++YPN
Sbjct: 243 AFAGRTSVGDEMAVPD---GVGVNCTDVSHYSGLVEALEDALPSYIGDSVRPWLVLYPNG 299
Query: 264 G 264
G
Sbjct: 300 G 300
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 131/362 (36%), Gaps = 92/362 (25%)
Query: 283 DVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIGPYGTVLRDGSEYSGHYVD 339
DV LWS+ + +P+ ++ H F+R + TA Y T R G Y D
Sbjct: 11 DVSHTALWSAKPILEQPQVIIDAHLAFLRAGADLLSTATYQCSYRTFERAG------YSD 64
Query: 340 SMTEADLIAWHRPNVEALVRAGVDYLALIKPSISS-QTAASIGPYGTVLRDGSEYSGHY- 397
+ + R EA + Y ++S + S+GP+G L EY G Y
Sbjct: 65 ADARTAMTRAVRLADEARRK----YCEESGKALSDIKLVLSLGPFGATLSPAQEYDGCYP 120
Query: 398 -------------------------------VDSMTEADLIAWHRPNVEALVRAGVDYLA 426
V ++ + L H + V +D +A
Sbjct: 121 PPFGPQAYCTSGENINAFPAGPEGDEAESRAVQALVDFHLERLHVFAADEEVWHAIDIIA 180
Query: 427 LETIPAEKE----ALALVKLLREFP-GQKAW-LSFSCKDDTHTSH-----------GELI 469
ETIP +E +A+ KL+ G+KAW LS D G+++
Sbjct: 181 FETIPLLREITAVRVAMAKLVAGVADGRKAWWLSVLFPDGKFPEKRRGEPSVSREVGDIV 240
Query: 470 SSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTV-------QTIVYP 517
SA +A PD +GVNC SH S LV ++ + P+ ++YP
Sbjct: 241 RSAFAGRTSVGDEMAVPD---GVGVNCTDVSHYSGLVEALEDALPSYIGDSVRPWLVLYP 297
Query: 518 NKGGVWDSVHMKWLDTE-----------DEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQ 566
N G V+D V W + D + H W G ++GGCC +I+
Sbjct: 298 NGGDVYDPVSRTWKEGSGKEETWADKLVDLATRAHKATVW---GGVVLGGCCRCGPDKIR 354
Query: 567 QM 568
+
Sbjct: 355 ML 356
>gi|50306329|ref|XP_453138.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642272|emb|CAH00234.1| KLLA0D01551p [Kluyveromyces lactis]
Length = 331
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 92/193 (47%), Gaps = 11/193 (5%)
Query: 391 SEYSGHYVDSMTEADLIAWHRPNVEALVRA-GVDYLALETIPAEKEALALVKLLREFPGQ 449
SE++G Y + D + RP + V++ +D + ETIP E A++ +
Sbjct: 134 SEFTGDYGPHPDQIDYFEYFRPQLGNFVQSKDIDIIGFETIPNIHELRAILSWDETVLSK 193
Query: 450 KAWLSFSC------KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
++ S +D T + S++ L +N + IG+NC + ++
Sbjct: 194 PFYIGLSVHEYGVLRDGTSMQQIADLISSLGDKLNSN---LMFIGINCCAFNQSHMILES 250
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQWLEEGVNIIGGCCEVTS 562
+ S P + IVYPN G ++D+V WL E++ V ++E G IIGGCC T
Sbjct: 251 LHNSCPNMPLIVYPNSGEIYDTVKKIWLKNENQLCTWDDVVKSYIENGARIIGGCCRTTV 310
Query: 563 YEIQQMRIMIDEF 575
+I+++R+ ++++
Sbjct: 311 DDIKEVRLAVNKY 323
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 133/333 (39%), Gaps = 66/333 (19%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRD----------FIRAGA 56
V ++DG +++ I +P+WS+V E + +D FI AGA
Sbjct: 16 VLVMDGGQGTELENRGINV--ANPVWSTVPFINESFWSSDASKDRIIVKQMFEDFIEAGA 73
Query: 57 DIIQSSCYQANVDNLTKLG--YSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLL 114
DI+ + YQ + ++++ + +E LL + V S ++ L
Sbjct: 74 DILMTITYQTSFKSVSENTPIRTLEEYNGLLDRIVSFSRSCIGEDR------------YL 121
Query: 115 TGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA-GVDYLALET 173
G IG +G + SE++G Y + D + RP + V++ +D + ET
Sbjct: 122 IG------CIGAWGAHV--CSEFTGDYGPHPDQIDYFEYFRPQLGNFVQSKDIDIIGFET 173
Query: 174 IPAEKEALALVKLLREFPGQKAWLSFSC------KDDTHTSHGELISSAVTSCLLANPDQ 227
IP E A++ + ++ S +D T + S++ L +N
Sbjct: 174 IPNIHELRAILSWDETVLSKPFYIGLSVHEYGVLRDGTSMQQIADLISSLGDKLNSN--- 230
Query: 228 IQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGH 287
+ IG+NC + ++ + S P + IVYPN G ++ D T+K
Sbjct: 231 LMFIGINCCAFNQSHMILESLHNSCPNMPLIVYPNSG-EIYD----------TVK----- 274
Query: 288 PLWSSVYLTTEPEACVETHRDFIRGHIETAASI 320
++L E + C T D ++ +IE A I
Sbjct: 275 ----KIWLKNENQLC--TWDDVVKSYIENGARI 301
>gi|336372079|gb|EGO00419.1| hypothetical protein SERLA73DRAFT_181000 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384829|gb|EGO25977.1| hypothetical protein SERLADRAFT_466856 [Serpula lacrymans var.
lacrymans S7.9]
Length = 398
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 126/323 (39%), Gaps = 72/323 (22%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V +LDG + + +D+ PLWS+ + E ++ H F+ AGA I +S YQ
Sbjct: 12 VNVLDGGLGTTLEDIFHEDIAHTPLWSAKSIDENSETLIQVHLSFLGAGARTILTSTYQC 71
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ GYS ++A ++ KSV++ AK + ++ N+L G I A S+GP
Sbjct: 72 AFTTFERAGYSREDATRIMRKSVEVAREAKRR-------FCDQNRNVLPGDIRIALSLGP 124
Query: 127 YGTVLRDGSEYSGHYV-------------DSMTEADLIAWHRPNVEALVRA--------- 164
+G L E+ G Y + D +A +++AL
Sbjct: 125 FGATLYPAQEFDGFYPPPYGPKAFSSSGQNENVFGDDVAQRESSIDALAHFHSERLQVFT 184
Query: 165 -------GVDYLALETIPAEKEALALVKLLREFPGQKA--------WLSFSCKD----DT 205
VD +A ET+P +E A+ + + G A W+S +
Sbjct: 185 SDRECWDAVDCIAFETVPLAREVKAIRRAMGMLGGAVADNGEWKPWWISTVFPGGHYPER 244
Query: 206 HTSHGELIS-SAVTSCLLA--NPDQI-----------QAIGVNCVR----PSHVSTLVRC 247
T GE +S S V + +L N +I IG+NC P +S R
Sbjct: 245 KTPGGEYLSASEVLNAVLGEENDGRIGEVVRQPLTLPSGIGINCTGIEFLPDLLSDFERA 304
Query: 248 IKQSHPTVQ------TIVYPNKG 264
+ + + ++YPN G
Sbjct: 305 LNNAEEKARLGGRPWLVLYPNGG 327
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 79/398 (19%), Positives = 135/398 (33%), Gaps = 106/398 (26%)
Query: 259 VYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAA 318
+Y ++ V +LDG + + +D+ PLWS+ + E ++ H F+ T
Sbjct: 6 LYSDQSVNVLDGGLGTTLEDIFHEDIAHTPLWSAKSIDENSETLIQVHLSFLGAGARTI- 64
Query: 319 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT-- 376
+ Y + T + + R + ++R V+ K Q
Sbjct: 65 --------------LTSTYQCAFTTFERAGYSREDATRIMRKSVEVAREAKRRFCDQNRN 110
Query: 377 --------AASIGPYGTVLRDGSEYSGHYV-------------DSMTEADLIAWHRPNVE 415
A S+GP+G L E+ G Y + D +A +++
Sbjct: 111 VLPGDIRIALSLGPFGATLYPAQEFDGFYPPPYGPKAFSSSGQNENVFGDDVAQRESSID 170
Query: 416 ALVRA----------------GVDYLALETIPAEKEALALVKLLREFPGQKA-------- 451
AL VD +A ET+P +E A+ + + G A
Sbjct: 171 ALAHFHSERLQVFTSDRECWDAVDCIAFETVPLAREVKAIRRAMGMLGGAVADNGEWKPW 230
Query: 452 WLSFSCKD----DTHTSHGELIS-SAVTSCLLA--NPDQI-----------QAIGVNCVR 493
W+S + T GE +S S V + +L N +I IG+NC
Sbjct: 231 WISTVFPGGHYPERKTPGGEYLSASEVLNAVLGEENDGRIGEVVRQPLTLPSGIGINCTG 290
Query: 494 ----PSHVSTLVRCIKQSHPTVQT------IVYPNKGGVWDSVHMKWLDTEDEYSILHYV 543
P +S R + + + ++YPN G V+D V W + + +
Sbjct: 291 IEFLPDLLSDFERALNNAEEKARLGGRPWLVLYPNGGDVYDPVSRTWRGSNETQKGRVWG 350
Query: 544 PQ-------------WLEEGVNIIGGCCEVTSYEIQQM 568
Q W G ++GGCC EI+ +
Sbjct: 351 EQLGQIVDSARGNGTW---GGILVGGCCRTGPAEIRAL 385
>gi|343428478|emb|CBQ72008.1| related to homocysteine S-methyltransferase [Sporisorium reilianum
SRZ2]
Length = 445
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE---------ACVETHRDFIRAGA 56
++ +LDG + + D+ PLWS+ L + + + H +++AGA
Sbjct: 18 RIGILDGGLATYLEDGLNFDLSKGPLWSARLLDEKEDDVSGGKGQKGIFDAHLHYLQAGA 77
Query: 57 DIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG 116
II ++ YQA++++ + Y + A L+ K+V L A N T N T N G
Sbjct: 78 GIIGTATYQASLESFARANYDQASASHLMSKAVDLACQALHSHNNTS--NAASTSN---G 132
Query: 117 HIETAASIGPYGTVLRDGSEYSGHY-------VDSMTEA-----DLIAWHRPNVEALVRA 164
+ S+GPYG +L +G+EY+G Y D E ++ A+H+ +EA V
Sbjct: 133 RPLISLSLGPYGAMLSNGAEYTGDYRRTFLPEFDPQREQQPSLDEMAAFHQRRIEAFVAQ 192
Query: 165 G----VDYLALETIPAEKEALAL 183
V LA+ET+P EALA
Sbjct: 193 PSWQHVGVLAVETVPRADEALAF 215
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 43/227 (18%)
Query: 244 LVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE--- 300
++ I QS +++++ P + + +LDG + + D+ PLWS+ L + +
Sbjct: 1 MLALIDQS--ALESLLGPGR-IGILDGGLATYLEDGLNFDLSKGPLWSARLLDEKEDDVS 57
Query: 301 ------ACVETHRDFIR---GHIETA---ASIGPYGTVLRDGSEYSGHYVDSMTEADLIA 348
+ H +++ G I TA AS+ + D + S H + + A
Sbjct: 58 GGKGQKGIFDAHLHYLQAGAGIIGTATYQASLESFARANYDQASAS-HLMSKAVDLACQA 116
Query: 349 WHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHY-------VDSM 401
H N + + + LI + S+GPYG +L +G+EY+G Y D
Sbjct: 117 LHSHNNTSNAASTSNGRPLI--------SLSLGPYGAMLSNGAEYTGDYRRTFLPEFDPQ 168
Query: 402 TEA-----DLIAWHRPNVEALVRAG----VDYLALETIPAEKEALAL 439
E ++ A+H+ +EA V V LA+ET+P EALA
Sbjct: 169 REQQPSLDEMAAFHQRRIEAFVAQPSWQHVGVLAVETVPRADEALAF 215
>gi|171695692|ref|XP_001912770.1| hypothetical protein [Podospora anserina S mat+]
gi|170948088|emb|CAP60252.1| unnamed protein product [Podospora anserina S mat+]
Length = 371
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 112/278 (40%), Gaps = 51/278 (18%)
Query: 7 VKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+K LDG T+ + H +K + PLWSS L T+ + + F +AGAD+I ++ YQ
Sbjct: 18 IKFLDGGLGTTLETIHGVKFSESTPLWSSHLLLTDLQTLADCQMSFAKAGADVITTATYQ 77
Query: 66 ANVDNLTKL-------GYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHI 118
A+++ G L +V + A K + G +
Sbjct: 78 ASINGFKNTKTENWPNGVPLPNIGHFLKDAVSIARRAAGK---------------VGGRV 122
Query: 119 ETAASIGPYGTVLRDGSEYSGHYVDSMTEAD----LIAWHRPNVEALVRA-----GVDYL 169
A S+GPYG + +EY+GHY D D L WH V+ V Y+
Sbjct: 123 --ALSLGPYGATMIPSTEYTGHY-DIEPSQDIVDKLFHWHSERYNLYVQVPNLLFDVSYI 179
Query: 170 ALETIPAEKEALALVKLL------------REFPGQ-KAWLS-FSCKDDTHTSHGELISS 215
A ETIP E LA+ + L REF W+S DD G +
Sbjct: 180 AFETIPRLDEILAIRRFLNADISGGVKLGPREFYHDIPVWISVLFPSDDDKMPDGTSVED 239
Query: 216 AVTSCLLA--NPDQIQAIGVNCVRPSHVSTLVRCIKQS 251
AV + + Q +G+NC + S + LVR ++
Sbjct: 240 AVAAMISKEFGSKTPQFVGINCTQVSKLEGLVRQFTKA 277
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 140/365 (38%), Gaps = 62/365 (16%)
Query: 263 KGVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
+ +K LDG T+ + H +K + PLWSS L T+ + + F + + +
Sbjct: 16 RTIKFLDGGLGTTLETIHGVKFSESTPLWSSHLLLTDLQTLADCQMSFAKAGADVITTAT 75
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
++ + ++ TE PN+ ++ V + + A S+G
Sbjct: 76 YQASI--------NGFKNTKTENWPNGVPLPNIGHFLKDAVSIARRAAGKVGGRVALSLG 127
Query: 382 PYGTVLRDGSEYSGHYVDSMTEAD----LIAWHRPNVEALVRA-----GVDYLALETIPA 432
PYG + +EY+GHY D D L WH V+ V Y+A ETIP
Sbjct: 128 PYGATMIPSTEYTGHY-DIEPSQDIVDKLFHWHSERYNLYVQVPNLLFDVSYIAFETIPR 186
Query: 433 EKEALALVKLL------------REFPGQ-KAWLS-FSCKDDTHTSHGELISSAVTSCLL 478
E LA+ + L REF W+S DD G + AV + +
Sbjct: 187 LDEILAIRRFLNADISGGVKLGPREFYHDIPVWISVLFPSDDDKMPDGTSVEDAVAAMIS 246
Query: 479 A--NPDQIQAIGVNCVRPSHVSTLVRCI-KQSHPTVQT---------IVYPNK---GGVW 523
Q +G+NC + S + LVR K V T ++YP+ G +
Sbjct: 247 KEFGSKTPQFVGINCTQVSKLEGLVRQFTKAVEKLVATGAVEKWPGLVLYPDGTKVGERY 306
Query: 524 DSVHMKW-------LDTEDEYSILHYVPQWLEEGVN-------IIGGCCEVTSYEIQQMR 569
++ +W T ++ S + ++E + +IGGCC T IQ++
Sbjct: 307 NTATKEWEISGEGSKKTPEDVSWERQLAMVVKEAYDTGGWSSFLIGGCCRTTPENIQRLT 366
Query: 570 IMIDE 574
I E
Sbjct: 367 WAIRE 371
>gi|319430413|ref|NP_985957.2| AFR410Wp [Ashbya gossypii ATCC 10895]
gi|308912578|gb|AAS53781.2| AFR410Wp [Ashbya gossypii ATCC 10895]
gi|374109187|gb|AEY98093.1| FAFR410Wp [Ashbya gossypii FDAG1]
Length = 326
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 135/334 (40%), Gaps = 40/334 (11%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
+ + V ++DG ++ R + DV PLWS+ A ++T R R A S
Sbjct: 10 FLERNVLVMDGGMGVELERRGM-DVK-SPLWSTAPFLRGDRAALDTIRGLYR-EFRAAGS 66
Query: 320 IG----PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD--YLALIKPSIS 373
G Y +YSG R + E + VD Y + P+
Sbjct: 67 RGISTLTYQASFHSMVKYSGS-----------VSSRADYEKFLEQVVDFTYRECVDPA-R 114
Query: 374 SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-AGVDYLALETIPA 432
S+GPY L +G+EY+G Y + + P V +D +A ET+P
Sbjct: 115 DYIIGSVGPYAAFLCNGAEYTGDY--GFETINFFNYFEPQVSKFATDPRIDAIAFETVPN 172
Query: 433 EKEALALVK-----LLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQI 484
E +A+++ LL+ P ++S S KD+ G ++ + + P +
Sbjct: 173 VVELMAMLQPEFHALLKNKP---FYISISAKDEHVLRDGTPLAVVGQLIRERMDDLPPNL 229
Query: 485 QAIGVNCVRPSHVSTLVRCIK---QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL- 540
G+NCV + + ++ + Q P +YPN V+D W ++D S+
Sbjct: 230 LCFGLNCVDLTRSAAMLAELNMQLQDCPIKFQAIYPNGTSVFDESLSAWRPSKDAESLTW 289
Query: 541 -HYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMID 573
V +L + +IGGCC T +++Q+ +D
Sbjct: 290 AEAVKLYLNQDCRMIGGCCGTTPQDMRQIAEALD 323
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 120/288 (41%), Gaps = 43/288 (14%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVET----HRDFIRAGADIIQS 61
V ++DG ++ R + DV PLWS+ A ++T +R+F AG+ I +
Sbjct: 14 NVLVMDGGMGVELERRGM-DVK-SPLWSTAPFLRGDRAALDTIRGLYREFRAAGSRGIST 71
Query: 62 SCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKEN---QTPDINLNKTFNLLTGHI 118
YQA+ ++ K S ++S D E Q D + + +I
Sbjct: 72 LTYQASFHSMVKYSGS--------------VSSRADYEKFLEQVVDFTYRECVDPARDYI 117
Query: 119 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-AGVDYLALETIPAE 177
S+GPY L +G+EY+G Y + + P V +D +A ET+P
Sbjct: 118 --IGSVGPYAAFLCNGAEYTGDY--GFETINFFNYFEPQVSKFATDPRIDAIAFETVPNV 173
Query: 178 KEALALVK-----LLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQ 229
E +A+++ LL+ P ++S S KD+ G ++ + + P +
Sbjct: 174 VELMAMLQPEFHALLKNKP---FYISISAKDEHVLRDGTPLAVVGQLIRERMDDLPPNLL 230
Query: 230 AIGVNCVRPSHVSTLVRCIK---QSHPTVQTIVYPNKGVKLLDGSFTS 274
G+NCV + + ++ + Q P +YPN G + D S ++
Sbjct: 231 CFGLNCVDLTRSAAMLAELNMQLQDCPIKFQAIYPN-GTSVFDESLSA 277
>gi|322695297|gb|EFY87108.1| hypothetical protein MAC_06897 [Metarhizium acridum CQMa 102]
Length = 343
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 152/347 (43%), Gaps = 51/347 (14%)
Query: 263 KGVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
K + LLDG TS ++ +K PLWSS L ++P ++ DF ++ +
Sbjct: 2 KRILLLDGGLGTSLEQKYNLKFNSSKPLWSSDLLVSDPNTLLKCQSDFGAIPVDILLTAT 61
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
++ S + D ++ D+ + VE A ++ + A S+G
Sbjct: 62 YQVSIEGFAGTKSPRFPDGISSLDIPQFLETAVEVAENATREHHGTV--------ALSLG 113
Query: 382 PYGTVLRDGSEYSGHYVDS-MTEADLIAWHRPNVEALVR-----AGVDYLALETIPAEKE 435
PYG + EYSG Y D+ ++ L WHR ++ R + + Y+++ETIP E
Sbjct: 114 PYGACMIPSQEYSGKYDDAHNSQEALYDWHRERMQLFSRVQGLASRIGYISMETIPRADE 173
Query: 436 ALALVKLLREFP---GQKAWLS-FSCKDDTHTSHGELISSAVTSCLLANPDQIQA----I 487
++ + L + P G W+S D+ GE +A+ + + +P ++ +
Sbjct: 174 IASMRRALDQVPELAGVPFWMSCLYPGDNQRLPSGESPEAALRA--MFDPRVAKSVPWGV 231
Query: 488 GVNCVRPSHVSTLVRCIKQ-SHPTVQ---------TIVYPN--KGGVWDSVHMKWLDTED 535
G+NC + ++ L++ + H VQ ++YP+ G +++V +W + D
Sbjct: 232 GINCAKVWKLTPLLKQYESVVHALVQDGTLPEWPALVLYPDGTNGEAYNTVTQEW-EVAD 290
Query: 536 EYSILHYVP--QWLEEGVN-----------IIGGCCEVTSYEIQQMR 569
+ + VP + L E V ++GGCC +S +I ++R
Sbjct: 291 DAEDVTRVPWEEQLAEAVRGTEARGKWKQIVVGGCCMASSQDIARLR 337
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 119/276 (43%), Gaps = 44/276 (15%)
Query: 6 KVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
++ LLDG TS ++ +K PLWSS L ++P ++ DF DI+ ++ Y
Sbjct: 3 RILLLDGGLGTSLEQKYNLKFNSSKPLWSSDLLVSDPNTLLKCQSDFGAIPVDILLTATY 62
Query: 65 QANVDNLTKL-------GYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH 117
Q +++ G S + L +V++ +A + H
Sbjct: 63 QVSIEGFAGTKSPRFPDGISSLDIPQFLETAVEVAENATREH-----------------H 105
Query: 118 IETAASIGPYGTVLRDGSEYSGHYVDS-MTEADLIAWHRPNVEALVR-----AGVDYLAL 171
A S+GPYG + EYSG Y D+ ++ L WHR ++ R + + Y+++
Sbjct: 106 GTVALSLGPYGACMIPSQEYSGKYDDAHNSQEALYDWHRERMQLFSRVQGLASRIGYISM 165
Query: 172 ETIPAEKEALALVKLLREFP---GQKAWLS-FSCKDDTHTSHGELISSAVTSCLLANPDQ 227
ETIP E ++ + L + P G W+S D+ GE +A+ + + +P
Sbjct: 166 ETIPRADEIASMRRALDQVPELAGVPFWMSCLYPGDNQRLPSGESPEAALRA--MFDPRV 223
Query: 228 IQA----IGVNCVRPSHVSTLVRCIKQSHPTVQTIV 259
++ +G+NC + V L +KQ V +V
Sbjct: 224 AKSVPWGVGINCAK---VWKLTPLLKQYESVVHALV 256
>gi|302915064|ref|XP_003051343.1| hypothetical protein NECHADRAFT_40637 [Nectria haematococca mpVI
77-13-4]
gi|256732281|gb|EEU45630.1| hypothetical protein NECHADRAFT_40637 [Nectria haematococca mpVI
77-13-4]
Length = 342
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 148/351 (42%), Gaps = 57/351 (16%)
Query: 261 PNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASI 320
P+K + L G TS S++++ PLWSS L ++P DF G +
Sbjct: 2 PSKTLILDGGLGTSLESKYSVSFSRSTPLWSSHLLISDPATLESCQSDF--GAV------ 53
Query: 321 GPYGTVLRDGSEYSGH-YVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAAS 379
P +L + S + D+ TE R V + V+ +A +Q A S
Sbjct: 54 -PVDVLLTATYQVSAKGFADTRTEEFPDGIGRDTVPRFLDDAVN-IAQRAVGDKAQVALS 111
Query: 380 IGPYGTVLRDGSEYSGHYVDSM-TEADLIAWHRPNVEAL-----VRAGVDYLALETIPAE 433
GPYG L EYSG Y D+ +E+ L WHR + V V ++ALETIP
Sbjct: 112 YGPYGACLIPSQEYSGKYDDAHDSESTLEEWHRERLGLFAEVPDVGKRVSHVALETIPRV 171
Query: 434 KEALALVKLLREFPGQKA---WLS-FSCKDDTHTSHGELISSAVTSCL-----LANPDQI 484
E +A+ K L P W S S D G I +AV + L + P
Sbjct: 172 DEIIAMRKALAATPALSDLPYWTSCLSPGSDLTLPDGNSIEAAVEAMLDSSVSVKTP--- 228
Query: 485 QAIGVNCVRPSHV--------STLVRCIKQSH----PTVQTIVYPN--KGGVWDSVHMKW 530
IG+NC + + ST+ R I+Q P + ++YP+ G V+++ KW
Sbjct: 229 WGIGINCTKVDKLDRLLQIFESTVARLIEQGRLDDWPAL--VLYPDGTNGEVYNTTTQKW 286
Query: 531 L---DTEDEY---------SILHYVPQWLEEGVNIIGGCCEVTSYEIQQMR 569
D +D+ S++ + V ++GGCC+ S +I+++R
Sbjct: 287 ELLDDAKDQVRSSWESQVESVVRATESRGKWPVILVGGCCKARSEDIKRLR 337
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 117/285 (41%), Gaps = 44/285 (15%)
Query: 6 KVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
K +LDG TS S++++ PLWSS L ++P DF D++ ++ Y
Sbjct: 4 KTLILDGGLGTSLESKYSVSFSRSTPLWSSHLLISDPATLESCQSDFGAVPVDVLLTATY 63
Query: 65 QANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
Q + G+++ + +D + D +N + + A S
Sbjct: 64 QVSAK-----GFADTRTEEFPD------GIGRDTVPRFLDDAVNIAQRAVGDKAQVALSY 112
Query: 125 GPYGTVLRDGSEYSGHYVDSM-TEADLIAWHRPNVEAL-----VRAGVDYLALETIPAEK 178
GPYG L EYSG Y D+ +E+ L WHR + V V ++ALETIP
Sbjct: 113 GPYGACLIPSQEYSGKYDDAHDSESTLEEWHRERLGLFAEVPDVGKRVSHVALETIPRVD 172
Query: 179 EALALVKLLREFPGQKA---WLS-FSCKDDTHTSHGELISSAVTSCL-----LANPDQIQ 229
E +A+ K L P W S S D G I +AV + L + P
Sbjct: 173 EIIAMRKALAATPALSDLPYWTSCLSPGSDLTLPDGNSIEAAVEAMLDSSVSVKTP---W 229
Query: 230 AIGVNCVRPSHV--------STLVRCIKQSH----PTVQTIVYPN 262
IG+NC + + ST+ R I+Q P + ++YP+
Sbjct: 230 GIGINCTKVDKLDRLLQIFESTVARLIEQGRLDDWPAL--VLYPD 272
>gi|307193331|gb|EFN76193.1| Homocysteine S-methyltransferase 2 [Harpegnathos saltator]
Length = 343
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 121/264 (45%), Gaps = 12/264 (4%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +Q+ + + + + + E +ET+ DF+RAGA II+++ Y+ +
Sbjct: 6 VLDGDSEAQLYQRLKPSKELEKIIALYAVEYHKEEVIETYLDFLRAGAQIIRTNTYRLSD 65
Query: 69 DNLTKLGYSE--QEALDLLHKSVQLMNSAKDK--ENQTPDINLNKTFNLLTGHIETAASI 124
+ K E Q +L+ KSV+L +A K E + D ++ F+ I A
Sbjct: 66 YTIEKYFKPESSQFYTELMEKSVKLARAAVTKYLEEKRKDPKYSELFD--RCEILVAGCC 123
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPN-VEALVRAGVDYLALETIPAEKEALAL 183
G V +Y D+ A LI +H + V LV+ GVD L E+IP+ E +
Sbjct: 124 GS-SVVSECVDKYELTLKDTQIAAQLIYFHHNDRVIELVKYGVDILTFESIPSLVETDII 182
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
+ +++ + W++F C+ D G + + C A QI AIG C P + +
Sbjct: 183 ISIMKRHHPIRGWITFLCRADGKLLDGNTLETVAMRCYDALGHQIIAIGAECPVPDVMKS 242
Query: 244 LVR---CIKQSHPT-VQTIVYPNK 263
+V +K SH V ++Y +K
Sbjct: 243 IVLDIGILKLSHEVQVPFVLYIDK 266
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 13/185 (7%)
Query: 399 DSMTEADLIAWHRPN-VEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSC 457
D+ A LI +H + V LV+ GVD L E+IP+ E ++ +++ + W++F C
Sbjct: 141 DTQIAAQLIYFHHNDRVIELVKYGVDILTFESIPSLVETDIIISIMKRHHPIRGWITFLC 200
Query: 458 KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR---CIKQSHPT-VQT 513
+ D G + + C A QI AIG C P + ++V +K SH V
Sbjct: 201 RADGKLLDGNTLETVAMRCYDALGHQIIAIGAECPVPDVMKSIVLDIGILKLSHEVQVPF 260
Query: 514 IVYPNKGGVWDSVHMKWLDTEDEYSILH--YVPQWLEEGVNIIGGCCEVTSYEIQQMRIM 571
++Y D VH+ + ++ + L YV +WL+ G+ IGG ++ +R
Sbjct: 261 VLY------IDKVHLPITENKEASNSLMSDYVDEWLDHGIRYIGGGINTRPEDVALIRKQ 314
Query: 572 IDEFN 576
+D++
Sbjct: 315 VDDYR 319
>gi|159125886|gb|EDP51002.1| homocysteine S-methyltransferase, putative [Aspergillus fumigatus
A1163]
Length = 343
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 116/269 (43%), Gaps = 49/269 (18%)
Query: 4 ICKVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSS 62
+ +++LDG TS +H + PLWSS L ++P + R+FI AG D++ ++
Sbjct: 1 MTSIQILDGGLGTSLQDQHGVTFDSSTPLWSSHLLVSDPTTLLACQRNFITAGCDVLLTA 60
Query: 63 CYQANVDNLTKLG---YSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIE 119
YQ +++ + + + + K ++ + ++ +P +
Sbjct: 61 TYQVSIEGFARTKTPEFPDGIPRPAIGKYLRTALAVAEQARVSPS------------AAK 108
Query: 120 TAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAG------VDYLALE 172
A S+GPYG + G EYSG Y + +E L WH + + A V Y+A E
Sbjct: 109 IALSLGPYGACMIPGQEYSGKYDAEHDSEETLFQWHLERLRLFLEADEKLAERVQYVAFE 168
Query: 173 TIPAEKEALALVKLLRE------------FPGQKAWLSFSCKDDTHTSHGELISSAVTSC 220
T+P E A+ + +R FPG++A L +S G+++ +A
Sbjct: 169 TLPRLDEIRAVRRAIRTAGLNVPFWVACVFPGEEATLP------DGSSIGQIVQAA---- 218
Query: 221 LLANPDQIQ---AIGVNCVRPSHVSTLVR 246
LA D +G+NC + + LVR
Sbjct: 219 -LAEMDGAAVPWGVGINCTKIYKLDGLVR 246
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 141/353 (39%), Gaps = 69/353 (19%)
Query: 265 VKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
+++LDG TS +H + PLWSS L ++P + R+FI + +
Sbjct: 4 IQILDGGLGTSLQDQHGVTFDSSTPLWSSHLLVSDPTTLLACQRNFITAGCDVLLTATYQ 63
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG--VDYLALIKPSISSQTAASIG 381
++ + + D + RP + +R V A + PS +++ A S+G
Sbjct: 64 VSIEGFARTKTPEFPDGIP--------RPAIGKYLRTALAVAEQARVSPS-AAKIALSLG 114
Query: 382 PYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAG------VDYLALETIPAEK 434
PYG + G EYSG Y + +E L WH + + A V Y+A ET+P
Sbjct: 115 PYGACMIPGQEYSGKYDAEHDSEETLFQWHLERLRLFLEADEKLAERVQYVAFETLPRLD 174
Query: 435 EALALVKLLRE------------FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPD 482
E A+ + +R FPG++A L +S G+++ +A LA D
Sbjct: 175 EIRAVRRAIRTAGLNVPFWVACVFPGEEATLP------DGSSIGQIVQAA-----LAEMD 223
Query: 483 QIQ---AIGVNCVRPSHVSTLVRCI----------KQSHPTVQTIVYPN--KGGVWDSVH 527
+G+NC + + LVR Q ++YP+ G V+++
Sbjct: 224 GAAVPWGVGINCTKIYKLDGLVREFGEEVASAVGQGQVGAVPSLVLYPDGTNGEVYNTTT 283
Query: 528 MKWLDTED---------EYSILHYVPQWLEEG---VNIIGGCCEVTSYEIQQM 568
W E E + V G ++GGCC+ + +I+++
Sbjct: 284 QTWEKQEGYTSDARGPWEVQLAQIVTNARATGPFTSFLVGGCCKASHRDIRKL 336
>gi|70985372|ref|XP_748192.1| homocysteine S-methyltransferase [Aspergillus fumigatus Af293]
gi|66845820|gb|EAL86154.1| homocysteine S-methyltransferase, putative [Aspergillus fumigatus
Af293]
Length = 343
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 116/269 (43%), Gaps = 49/269 (18%)
Query: 4 ICKVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSS 62
+ +++LDG TS +H + PLWSS L ++P + R+FI AG D++ ++
Sbjct: 1 MTSIQILDGGLGTSLQDQHGVTFDSSTPLWSSHLLVSDPTTLLACQRNFITAGCDVLLTA 60
Query: 63 CYQANVDNLTKLG---YSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIE 119
YQ +++ + + + + K ++ + ++ +P +
Sbjct: 61 TYQVSIEGFARTKTPEFPDGIPRPAIGKYLRTALAVAEQARVSPSA------------AK 108
Query: 120 TAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAG------VDYLALE 172
A S+GPYG + G EYSG Y + +E L WH + + A V Y+A E
Sbjct: 109 IALSLGPYGACMIPGQEYSGKYDAEHDSEETLFQWHLERLRLFLEADEKLAERVQYVAFE 168
Query: 173 TIPAEKEALALVKLLRE------------FPGQKAWLSFSCKDDTHTSHGELISSAVTSC 220
T+P E A+ + +R FPG++A L +S G+++ +A
Sbjct: 169 TLPRLDEIRAVRRAIRTAGLNVPFWVACVFPGEEATLP------DGSSIGQIVQAA---- 218
Query: 221 LLANPDQIQ---AIGVNCVRPSHVSTLVR 246
LA D +G+NC + + LVR
Sbjct: 219 -LAEMDGAAVPWGVGINCTKIHKLDGLVR 246
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 141/353 (39%), Gaps = 69/353 (19%)
Query: 265 VKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
+++LDG TS +H + PLWSS L ++P + R+FI + +
Sbjct: 4 IQILDGGLGTSLQDQHGVTFDSSTPLWSSHLLVSDPTTLLACQRNFITAGCDVLLTATYQ 63
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG--VDYLALIKPSISSQTAASIG 381
++ + + D + RP + +R V A + PS +++ A S+G
Sbjct: 64 VSIEGFARTKTPEFPDGIP--------RPAIGKYLRTALAVAEQARVSPS-AAKIALSLG 114
Query: 382 PYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAG------VDYLALETIPAEK 434
PYG + G EYSG Y + +E L WH + + A V Y+A ET+P
Sbjct: 115 PYGACMIPGQEYSGKYDAEHDSEETLFQWHLERLRLFLEADEKLAERVQYVAFETLPRLD 174
Query: 435 EALALVKLLRE------------FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPD 482
E A+ + +R FPG++A L +S G+++ +A LA D
Sbjct: 175 EIRAVRRAIRTAGLNVPFWVACVFPGEEATLP------DGSSIGQIVQAA-----LAEMD 223
Query: 483 QIQ---AIGVNCVRPSHVSTLVRCI----------KQSHPTVQTIVYPN--KGGVWDSVH 527
+G+NC + + LVR Q ++YP+ G V+++
Sbjct: 224 GAAVPWGVGINCTKIHKLDGLVREFGEEVASAVGQGQVGAVPSLVLYPDGTNGEVYNTTT 283
Query: 528 MKWLDTED---------EYSILHYVPQWLEEG---VNIIGGCCEVTSYEIQQM 568
W E E + V G ++GGCC+ + +I+++
Sbjct: 284 QTWEKQEGYTSDARGPWEVQLAQIVTNARATGPFTSFLVGGCCKASHRDIRKL 336
>gi|321263029|ref|XP_003196233.1| homocysteine S-methyltransferase [Cryptococcus gattii WM276]
gi|317462708|gb|ADV24446.1| homocysteine S-methyltransferase, putative [Cryptococcus gattii
WM276]
Length = 382
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 124/296 (41%), Gaps = 72/296 (24%)
Query: 30 PLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTK-LGYSEQEALDLLHKS 88
PLW S L T P+ + + +++AGAD+++++ YQ NL L S +EA +L
Sbjct: 26 PLWGSEALRTNPDVIRKVYEGYVQAGADLVETATYQLTPQNLCDHLHCSREEAERILCSG 85
Query: 89 VQLMN------SAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSG--- 139
V+L+ S++++E++ D N + +L S GPYG+ L+ G EY G
Sbjct: 86 VKLVASSIASCSSRNQEHKDKDKGNNGSKVVL--------SFGPYGSTLQPGQEYGGIYP 137
Query: 140 --------------HYVDSMTEA-DLIAWHRPNV-------EALVRAGVDYLALETIPAE 177
Y D EA +A+H + EA R V ++A ETIP
Sbjct: 138 PPYGPSTSTNAFPPDYNDKEEEAIQALAYHHLDKLEAINHDEAAWRE-VGWIAFETIPVL 196
Query: 178 KEALALVKLL----REFPG-------------QKAWLSFSCKDDTHT------SHGELIS 214
E + + + R+ P +K W++ H SH +
Sbjct: 197 HEVRGIRRAMGIMRRKLPALYTGGDNGSLWWDKKFWITSPFPMGQHPQLLPDGSHASI-- 254
Query: 215 SAVTSCLLANPDQI-QAIGVNCVRPSHVSTLVRCIKQSHP-----TVQTIVYPNKG 264
V L + PD I IG+NC PS++ +L P V+ ++YP+ G
Sbjct: 255 PQVIDALFSGPDPIPNGIGINCANPSYLRSLTSLFTSHLPFEFFGKVEMVIYPDGG 310
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 140/372 (37%), Gaps = 104/372 (27%)
Query: 288 PLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLI 347
PLW S L T P+ R G+++ A D E + + + D +
Sbjct: 26 PLWGSEALRTNPDVI----RKVYEGYVQAGA----------DLVETATYQLTPQNLCDHL 71
Query: 348 AWHRPNVEALVRAGVDYLALIKPSISSQTAA---------------SIGPYGTVLRDGSE 392
R E ++ +GV +A S SS+ S GPYG+ L+ G E
Sbjct: 72 HCSREEAERILCSGVKLVASSIASCSSRNQEHKDKDKGNNGSKVVLSFGPYGSTLQPGQE 131
Query: 393 YSG-----------------HYVDSMTEA-DLIAWHRPNV-------EALVRAGVDYLAL 427
Y G Y D EA +A+H + EA R V ++A
Sbjct: 132 YGGIYPPPYGPSTSTNAFPPDYNDKEEEAIQALAYHHLDKLEAINHDEAAWRE-VGWIAF 190
Query: 428 ETIPAEKEALALVKLL----REFPG-------------QKAWLSFSCKDDTHT------S 464
ETIP E + + + R+ P +K W++ H S
Sbjct: 191 ETIPVLHEVRGIRRAMGIMRRKLPALYTGGDNGSLWWDKKFWITSPFPMGQHPQLLPDGS 250
Query: 465 HGELISSAVTSCLLANPDQI-QAIGVNCVRPSHVSTLVRCIKQSHP-----TVQTIVYPN 518
H + V L + PD I IG+NC PS++ +L P V+ ++YP+
Sbjct: 251 HASI--PQVIDALFSGPDPIPNGIGINCANPSYLRSLTSLFTSHLPFEFFGKVEMVIYPD 308
Query: 519 KGGVWDSVHMKWL-------DTEDEYSILHYVPQWLE----------EGVNIIGGCCEVT 561
G V+D+ W+ ++E ++ + + + +GV ++GGCC+ +
Sbjct: 309 GGQVYDTTTRTWVLAPQSPENSEKWAEVVGGMAKEIRGAERDEKRVWKGV-VVGGCCKSS 367
Query: 562 SYEIQQMRIMID 573
EI+ +R +D
Sbjct: 368 FDEIRALRRFVD 379
>gi|255949320|ref|XP_002565427.1| Pc22g15090 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592444|emb|CAP98797.1| Pc22g15090 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 345
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 113/264 (42%), Gaps = 41/264 (15%)
Query: 4 ICKVKLLDGSF-TSQVSRHTIK-DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQS 61
+ +++LDG TS + IK D PLW+S L ++P RDF AG DI+ +
Sbjct: 1 MATIQILDGGLGTSLGDLYNIKFDSKTTPLWASHLLVSDPATLQACQRDFGVAGVDILLT 60
Query: 62 SCYQANVDNLTKL-------GYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLL 114
+ YQ + + + G L K+V + AK +E+ +
Sbjct: 61 ATYQVSAEGFARTKTAQFPDGILRSAVGPFLQKAVDIAEQAKVRESAS------------ 108
Query: 115 TGHIETAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAG------VD 167
A S+GPYG + G EYSG Y + +E L WH + A V
Sbjct: 109 -----VALSLGPYGACMIPGQEYSGAYDAEHDSEESLYLWHLDRLRMFAEADGELVSRVR 163
Query: 168 YLALETIPAEKEALALVKLLREFPGQ-KAWLS--FSCKDDT---HTSHGELISSAVTSCL 221
Y+A ET+P E A+ + +R + W++ F DD +S E++ +AV S
Sbjct: 164 YVAFETLPRLDEVRAVRRAIRASAFRVPFWIACVFPRDDDLLPDGSSVEEVVRAAVAS-- 221
Query: 222 LANPDQIQAIGVNCVRPSHVSTLV 245
+ D +G+NC + ++ LV
Sbjct: 222 MEGGDVPWGVGINCTKMHKLAGLV 245
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 141/345 (40%), Gaps = 51/345 (14%)
Query: 265 VKLLDGSF-TSQVSRHTIK-DVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
+++LDG TS + IK D PLW+S L ++P RDF ++ +
Sbjct: 4 IQILDGGLGTSLGDLYNIKFDSKTTPLWASHLLVSDPATLQACQRDFGVAGVDILLTATY 63
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
+ + + D + R V ++ VD K S+ A S+GP
Sbjct: 64 QVSAEGFARTKTAQFPDGIL--------RSAVGPFLQKAVDIAEQAKVRESASVALSLGP 115
Query: 383 YGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAG------VDYLALETIPAEKE 435
YG + G EYSG Y + +E L WH + A V Y+A ET+P E
Sbjct: 116 YGACMIPGQEYSGAYDAEHDSEESLYLWHLDRLRMFAEADGELVSRVRYVAFETLPRLDE 175
Query: 436 ALALVKLLREFPGQ-KAWLS--FSCKDDT---HTSHGELISSAVTSCLLANPDQIQAIGV 489
A+ + +R + W++ F DD +S E++ +AV S + D +G+
Sbjct: 176 VRAVRRAIRASAFRVPFWIACVFPRDDDLLPDGSSVEEVVRAAVAS--MEGGDVPWGVGI 233
Query: 490 NCVRPSHVSTLVRCIKQSHPTV----------QTIVYPN--KGGVWDSVHMKWLDTE--- 534
NC + ++ LV ++ V ++YP+ G V+++ W +
Sbjct: 234 NCTKMHKLAGLVDLFGRAVAEVVAEGQVSAPPSLVLYPDGTNGEVYNTTTQVWEKRDGLG 293
Query: 535 DEYSILHYVPQWLEEGVN-----------IIGGCCEVTSYEIQQM 568
D S + L + VN ++GGCC+ + ++I+++
Sbjct: 294 DNLSANRPWEEQLAQVVNEAYRKGHFTSFLVGGCCKASHHDIKKL 338
>gi|307193330|gb|EFN76192.1| Homocysteine S-methyltransferase [Harpegnathos saltator]
Length = 346
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 112/233 (48%), Gaps = 10/233 (4%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ +LDG F +Q+ R + + + +T+EP + ++TH DF+RAGA +I+++ ++
Sbjct: 3 QLLVLDGDFEAQLLRRSKHANEVGKSFMLQVITSEPYSVLQTHMDFLRAGAQLIRTNTHR 62
Query: 66 ANVDNL-TKLGYSEQEALDLLHKSVQLMNSAKDK-----ENQTPDINLNKTFNLLTGHIE 119
+ ++ T + E ++ +V L A K +Q + + +N + I
Sbjct: 63 ISTGSIGTHMNLDSTEVKPMVDMAVNLAKKAIMKYLHEVHDQKTSV---EQYNFSSRPI- 118
Query: 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 179
A G Y L D + +S++ L +H+ ++ L+ A VD L E+IP +E
Sbjct: 119 LAGCCGSYNATLFDNVFDTWKLTESLSLNYLSWFHQQRMQVLLNANVDLLTFESIPTLRE 178
Query: 180 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIG 232
A++ +L+ P +A ++F C ++ G + C + +QI AIG
Sbjct: 179 VDAIITVLKLHPTARALITFLCTENGKLLDGSNFADVAVHCYNSLTNQIFAIG 231
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 142/327 (43%), Gaps = 33/327 (10%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRG---------HIETA 317
+LDG F +Q+ R + + + +T+EP + ++TH DF+R H +
Sbjct: 6 VLDGDFEAQLLRRSKHANEVGKSFMLQVITSEPYSVLQTHMDFLRAGAQLIRTNTHRIST 65
Query: 318 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-- 375
SIG + + D +E V M + + + ++ L ++ + + SS+
Sbjct: 66 GSIGTHMNL--DSTE-----VKPMVDMAVNLAKKAIMKYLHEVHDQKTSVEQYNFSSRPI 118
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
A G Y L D + +S++ L +H+ ++ L+ A VD L E+IP +E
Sbjct: 119 LAGCCGSYNATLFDNVFDTWKLTESLSLNYLSWFHQQRMQVLLNANVDLLTFESIPTLRE 178
Query: 436 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGV---NCV 492
A++ +L+ P +A ++F C ++ G + C + +QI AIG N +
Sbjct: 179 VDAIITVLKLHPTARALITFLCTENGKLLDGSNFADVAVHCYNSLTNQIFAIGTEANNAI 238
Query: 493 RPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL---HYVPQWLEE 549
+ + + ++Y ++ +H W ED++S+ +YV WL+
Sbjct: 239 ADWTLQVMKNINYNREDKIPFVLYVSQS----QLHTMW--GEDKFSLSQQHNYVQDWLDA 292
Query: 550 GVNIIGGCCEVTSYEIQQMRIMIDEFN 576
G+ IGG + Q +R++ E N
Sbjct: 293 GICCIGGGSNTVA---QDIRMICKEVN 316
>gi|366993342|ref|XP_003676436.1| hypothetical protein NCAS_0D04940 [Naumovozyma castellii CBS 4309]
gi|342302302|emb|CCC70075.1| hypothetical protein NCAS_0D04940 [Naumovozyma castellii CBS 4309]
Length = 327
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV-RAGVDYLALETIPAEKEALA 438
IGP+G + +E++G Y D + +P ++ +D + ET+P E A
Sbjct: 126 IGPWGAHV--CAEFNGDYGAHPENIDYYQYFKPQLDNFFANENLDLIGFETVPNVNELKA 183
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIGVNCVRPS 495
++ + + ++ S ++ G E I + S + +G+NCV +
Sbjct: 184 ILSWDEKILSKPFYIGLSVHENGVLRDGTTMEEIGNIFKSLGNKVNPNLLLLGINCVSFN 243
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL--HYVPQWLEEGVNI 553
H +++ I ++ P + I YPN G V+D+V WL E S+ V +++E G I
Sbjct: 244 HSPSILEDIHKNLPDMPLIAYPNSGEVYDTVKKIWLPQNSENSLTWEQVVKRYIEAGARI 303
Query: 554 IGGCCEVTSYEIQQMRIMIDEF 575
IGGCC T +I ++ + +F
Sbjct: 304 IGGCCRTTPKDILEISKAVKKF 325
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 114/273 (41%), Gaps = 34/273 (12%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP----------EACVETHRDFIRAG 55
KV +LDG +++ I +P+WS++ +E + E DF+ AG
Sbjct: 16 KVLVLDGGQGTELENRGINV--ANPVWSTIPFVSESFWSDKSSNDRQIVKEMFEDFLAAG 73
Query: 56 ADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLT 115
A+I+ ++ YQ + ++ SE + L + +L+N ++ + + +
Sbjct: 74 AEILMTTTYQTSFKSV-----SENTDIKTLQEYNELLNRI-----------VSFSRDCIG 117
Query: 116 GHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV-RAGVDYLALETI 174
IGP+G + +E++G Y D + +P ++ +D + ET+
Sbjct: 118 EQKYLIGCIGPWGAHV--CAEFNGDYGAHPENIDYYQYFKPQLDNFFANENLDLIGFETV 175
Query: 175 PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAI 231
P E A++ + + ++ S ++ G E I + S + +
Sbjct: 176 PNVNELKAILSWDEKILSKPFYIGLSVHENGVLRDGTTMEEIGNIFKSLGNKVNPNLLLL 235
Query: 232 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
G+NCV +H +++ I ++ P + I YPN G
Sbjct: 236 GINCVSFNHSPSILEDIHKNLPDMPLIAYPNSG 268
>gi|58260266|ref|XP_567543.1| homocysteine S-methyltransferase [Cryptococcus neoformans var.
neoformans JEC21]
gi|134116290|ref|XP_773099.1| hypothetical protein CNBJ0940 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255720|gb|EAL18452.1| hypothetical protein CNBJ0940 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229593|gb|AAW46026.1| homocysteine S-methyltransferase, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 381
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 123/298 (41%), Gaps = 76/298 (25%)
Query: 30 PLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTK-LGYSEQEALDLLHKS 88
PLW S L T P+ + H +++ GAD+++++ YQ NL L +EA +L
Sbjct: 26 PLWGSEALRTNPDVIRKVHEGYVQGGADLVETATYQLTPQNLCDHLHCPREEAECILCSG 85
Query: 89 VQLMN------SAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHY- 141
V+L+ S++++E+ T NK+ +L S GPYG+ L+ G EY G Y
Sbjct: 86 VKLVASCIASCSSRNEEHNTKSKGGNKSKVVL--------SFGPYGSTLQPGQEYGGIYP 137
Query: 142 -------------VDSMTEAD-----LIAWHRPNVEALVRAG-----VDYLALETIPAEK 178
DS E + L H +EA+ G V+++A ETIP
Sbjct: 138 PPFGPSTSTNAFPPDSNDEEEAAIQALAYHHLDKLEAISHDGAAWREVEWIAFETIPVLH 197
Query: 179 EALALVKLLREFPG-----------------QKAWLSFS---------CKDDTHTSHGEL 212
E + + + G +K W++ D +H S ++
Sbjct: 198 EVRGIRRAMAILRGKLSALYADGDNIDLWWEKKFWITSPFPMGQHPQLLPDGSHASIPQV 257
Query: 213 ISSAVTSCLLANPDQI-QAIGVNCVRPSHVSTLVRCIKQSHP-----TVQTIVYPNKG 264
I S L + PD I IG+NC PS++ L P V+ ++YP+ G
Sbjct: 258 IHS-----LFSGPDPIPNGIGINCTNPSYLHFLSSSFTSHLPFEFFGKVEMVIYPDGG 310
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 116/315 (36%), Gaps = 90/315 (28%)
Query: 288 PLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLI 347
PLW S L T P+ + H +++G G L + + Y + D +
Sbjct: 26 PLWGSEALRTNPDVIRKVHEGYVQG-----------GADLVETATYQ---LTPQNLCDHL 71
Query: 348 AWHRPNVEALVRAGVDYLALIKPSISSQT---------------AASIGPYGTVLRDGSE 392
R E ++ +GV +A S SS+ S GPYG+ L+ G E
Sbjct: 72 HCPREEAECILCSGVKLVASCIASCSSRNEEHNTKSKGGNKSKVVLSFGPYGSTLQPGQE 131
Query: 393 YSGHY--------------VDSMTEAD-----LIAWHRPNVEALVRAG-----VDYLALE 428
Y G Y DS E + L H +EA+ G V+++A E
Sbjct: 132 YGGIYPPPFGPSTSTNAFPPDSNDEEEAAIQALAYHHLDKLEAISHDGAAWREVEWIAFE 191
Query: 429 TIPAEKEALALVKLLREFPG-----------------QKAWLSFS---------CKDDTH 462
TIP E + + + G +K W++ D +H
Sbjct: 192 TIPVLHEVRGIRRAMAILRGKLSALYADGDNIDLWWEKKFWITSPFPMGQHPQLLPDGSH 251
Query: 463 TSHGELISSAVTSCLLANPDQI-QAIGVNCVRPSHVSTLVRCIKQSHP-----TVQTIVY 516
S ++I S L + PD I IG+NC PS++ L P V+ ++Y
Sbjct: 252 ASIPQVIHS-----LFSGPDPIPNGIGINCTNPSYLHFLSSSFTSHLPFEFFGKVEMVIY 306
Query: 517 PNKGGVWDSVHMKWL 531
P+ G ++D+ W+
Sbjct: 307 PDGGQMYDTTTRAWV 321
>gi|422294116|gb|EKU21416.1| homocysteine S-methyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 155
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 32/157 (20%)
Query: 397 YVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKA----- 451
Y S L+ WHRP + L D LA ETIP + E +A+++LLRE Q+
Sbjct: 1 YASSCPLLQLMDWHRPRLAILGETDADLLAFETIPCQAEVVAILQLLREGREQEGSAPTS 60
Query: 452 -----WLSFSCKDDTHTSHGELISSAVTSCLLANPD-----QIQAIGVNCVRPSHVSTLV 501
W++ +C+D TH + GE + S V L+ D Q+ +GVNC P HV +
Sbjct: 61 RRTPCWITLACQDATHLNSGESLVSCVQ--LVKALDTGSRPQVVGLGVNCCAPQHVEGAL 118
Query: 502 RCIKQSHPTVQT---------------IVYPNKGGVW 523
+++ T+ I YPN G VW
Sbjct: 119 TVLREGLLTISAAKEVISAAKGSERILIAYPNSGEVW 155
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 69/154 (44%), Gaps = 32/154 (20%)
Query: 141 YVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKA----- 195
Y S L+ WHRP + L D LA ETIP + E +A+++LLRE Q+
Sbjct: 1 YASSCPLLQLMDWHRPRLAILGETDADLLAFETIPCQAEVVAILQLLREGREQEGSAPTS 60
Query: 196 -----WLSFSCKDDTHTSHGELISSAVTSCLLANPD-----QIQAIGVNCVRPSHVSTLV 245
W++ +C+D TH + GE + S V L+ D Q+ +GVNC P HV +
Sbjct: 61 RRTPCWITLACQDATHLNSGESLVSCVQ--LVKALDTGSRPQVVGLGVNCCAPQHVEGAL 118
Query: 246 RCIKQSHPTVQT---------------IVYPNKG 264
+++ T+ I YPN G
Sbjct: 119 TVLREGLLTISAAKEVISAAKGSERILIAYPNSG 152
>gi|443923441|gb|ELU42685.1| 40S ribosomal protein S0 [Rhizoctonia solani AG-1 IA]
Length = 607
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 126/296 (42%), Gaps = 69/296 (23%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LD + + K++ HPLWS+ + T P+A VE H F+RAG+ +I ++
Sbjct: 20 IAFLDAGLGTTLEDVLHKNI-SHPLWSAHLIDTNPDAIVEAHLAFLRAGSSVILTAT--- 75
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
GY+ +A + HK++ L A+ +I +N T + T + A S+GP
Sbjct: 76 -------AGYTHDQASAITHKAIALAVRAR-------EIYMNIT-SPDTLKPQVALSLGP 120
Query: 127 YGTVLRDGSEYSGHYV--------------------DSMTEADLIAWHRPNVEALVRA-- 164
+G L +E+SG Y + E L+ +H + L
Sbjct: 121 FGATLSPAAEFSGIYPPPYGPPQPVTFFTGEQALEDEQKAENALLKFHLERISMLASTKE 180
Query: 165 ---GVDYLALETIPAEKEALALVKLLREFPGQKA-------WLSFSCKDDT---HTSHGE 211
+D +A ET+P +EA A+ + + F W+SF+ D TS G+
Sbjct: 181 TWDAIDIIAFETVPLLREARAIRRAMTAFASANPSLRIPPWWISFNFPDGVLPEQTSQGK 240
Query: 212 LISS--AVTSCL-------LANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTI 258
++ AV++C A PD A G+NC + V L C+ + +QT+
Sbjct: 241 NYTAGDAVSACFAQHQADSTAIPD---AFGINC---TQVRYLHECVSLASDALQTV 290
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 155/396 (39%), Gaps = 108/396 (27%)
Query: 251 SHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFI 310
S T T + + + LD + + K++ HPLWS+ + T P+A VE H F+
Sbjct: 6 SKTTRLTSRFAREDIAFLDAGLGTTLEDVLHKNI-SHPLWSAHLIDTNPDAIVEAHLAFL 64
Query: 311 RGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKP 370
R +S+ +L + Y+ ++T H+ + VRA Y+ + P
Sbjct: 65 RA----GSSV-----ILTATAGYTHDQASAIT-------HK-AIALAVRAREIYMNITSP 107
Query: 371 -SISSQTAASIGPYGTVLRDGSEYSGHYV--------------------DSMTEADLIAW 409
++ Q A S+GP+G L +E+SG Y + E L+ +
Sbjct: 108 DTLKPQVALSLGPFGATLSPAAEFSGIYPPPYGPPQPVTFFTGEQALEDEQKAENALLKF 167
Query: 410 HRPNVEALVRA-----GVDYLALETIPAEKEALALVKLLREFPGQKA-------WLSFSC 457
H + L +D +A ET+P +EA A+ + + F W+SF+
Sbjct: 168 HLERISMLASTKETWDAIDIIAFETVPLLREARAIRRAMTAFASANPSLRIPPWWISFNF 227
Query: 458 KDDT---HTSHGELISS--AVTSCL-------LANPDQIQAIGVNC--VRPSH-----VS 498
D TS G+ ++ AV++C A PD A G+NC VR H S
Sbjct: 228 PDGVLPEQTSQGKNYTAGDAVSACFAQHQADSTAIPD---AFGINCTQVRYLHECVSLAS 284
Query: 499 TLVRCIKQ-----SHPTV------------QTIVYPNKGGVWDSVHMKWLDTEDEYS--- 538
++ +KQ S P+V +VYPN G ++D M WL E S
Sbjct: 285 DALQTVKQNPYSKSRPSVLDPRNLPSKSGPTLVVYPNGGRIYDPNTMTWLPAASESSETK 344
Query: 539 ---------------ILHYVPQWLEEGVNIIGGCCE 559
+ VP+ +IGGCC+
Sbjct: 345 GLSESDAWAIGLVDVLQGAVPEDSGWSGLLIGGCCK 380
>gi|402079758|gb|EJT75023.1| homocysteine S-methyltransferase [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 345
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 105/260 (40%), Gaps = 29/260 (11%)
Query: 4 ICKVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSS 62
+ +K+LDG TS ++ +K PLWSS L ++P + RDF AGAD++ ++
Sbjct: 1 MATIKILDGGLGTSLEDKYGVKFDHSRPLWSSDLLVSDPSTLLSCQRDFATAGADVVLTA 60
Query: 63 CYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAA 122
YQ +++ E + + + +A D A
Sbjct: 61 TYQVSLEGFAGTPTLEFPSGIPSGAVPRFLETAVD------------VAERAAAGAALAL 108
Query: 123 SIGPYGTVLRDGSEYSGHYVDSM-TEADLIAWHRPNVEA-----LVRAG---VDYLALET 173
S GPYG + G EYSG Y + EA L AWH + LV + Y+A ET
Sbjct: 109 SCGPYGACMVPGQEYSGRYDGAHDGEAALAAWHLERLRLYDESFLVSPSGPRLQYVAFET 168
Query: 174 IPAEKEALALVKLLRE-----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL--LANPD 226
+P E A+ K FPG+ DD G + AV + L L
Sbjct: 169 LPRLDEIRAVRKAFAAVDGGVFPGRFWIACVFPGDDEKLPDGSTVEQAVEAMLGPLDGGS 228
Query: 227 QIQAIGVNCVRPSHVSTLVR 246
+ IG+NC + + LV+
Sbjct: 229 KPWGIGINCTKLHKIQGLVK 248
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 133/350 (38%), Gaps = 57/350 (16%)
Query: 265 VKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
+K+LDG TS ++ +K PLWSS L ++P + RDF + + Y
Sbjct: 4 IKILDGGLGTSLEDKYGVKFDHSRPLWSSDLLVSDPSTLLSCQRDFATAGADVVLT-ATY 62
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPY 383
L + + T V + VD + + A S GPY
Sbjct: 63 QVSLE-------GFAGTPTLEFPSGIPSGAVPRFLETAVDVAERA--AAGAALALSCGPY 113
Query: 384 GTVLRDGSEYSGHYVDSM-TEADLIAWHRPNVEA-----LVRAG---VDYLALETIPAEK 434
G + G EYSG Y + EA L AWH + LV + Y+A ET+P
Sbjct: 114 GACMVPGQEYSGRYDGAHDGEAALAAWHLERLRLYDESFLVSPSGPRLQYVAFETLPRLD 173
Query: 435 EALALVKLLRE-----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL--LANPDQIQAI 487
E A+ K FPG+ DD G + AV + L L + I
Sbjct: 174 EIRAVRKAFAAVDGGVFPGRFWIACVFPGDDEKLPDGSTVEQAVEAMLGPLDGGSKPWGI 233
Query: 488 GVNCVRPSHVSTLV------------RCIKQSHPTVQTIVYPN--KGGVWDSVHMKW--- 530
G+NC + + LV R + + P + ++YP+ G V+++ W
Sbjct: 234 GINCTKLHKIQGLVKRFEDAVTGLVQRGVVKEAPAL--VLYPDGTNGEVYNTTTKIWEAP 291
Query: 531 --LDTED------EYSILHYVPQWLEEGV---NIIGGCCEVTSYEIQQMR 569
+ ++ E S+ V + E V ++GGCC+ I+ +R
Sbjct: 292 AGFENDEVPKVPWEDSLAEIVQRSKERAVFTSFLVGGCCKANHENIKALR 341
>gi|46134149|ref|XP_389390.1| hypothetical protein FG09214.1 [Gibberella zeae PH-1]
Length = 341
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 150/350 (42%), Gaps = 55/350 (15%)
Query: 261 PNKGVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
P+K + +LDG TS S++++ PLWSS L + DF G +
Sbjct: 2 PSK-ILILDGGLGTSLESKYSVTFSRSTPLWSSHLLVADQPTLQSCQSDF--GAV----- 53
Query: 320 IGPYGTVLRDGSEYSGH-YVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--T 376
P +L + S H + D+ TE R NV + D +++ + ++ +
Sbjct: 54 --PVDVLLTATYQVSLHGFADTRTEEFPNGISRENVPRFLD---DSVSIAERAVGDKGCV 108
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTE-ADLIAWHRPNVEAL-----VRAGVDYLALETI 430
A SIGPYG + G EYSG Y D DL +WHR + ++ + Y+ALETI
Sbjct: 109 ALSIGPYGACMIPGQEYSGKYDDKHDSLQDLESWHRERLGVFSEVNDIQKRLGYVALETI 168
Query: 431 PAEKEALALVKLLREFPGQKA---WLS-FSCKDDTHTSHGELISSAVTSCL--LANPDQI 484
P E +A+ K L P W + S + D G I +AV + L + +
Sbjct: 169 PRLDEIIAMRKALAATPALSKLPYWTALLSPEKDLRLPDGNSIEAAVEAMLDPEVSANIP 228
Query: 485 QAIGVNCVRPSHVSTLVRCIKQSHPTV----------QTIVYPN--KGGVWDSVHMKW-- 530
IG+NC + + +L++ + + + ++YP+ G V+++ KW
Sbjct: 229 WGIGINCTKVDKLDSLLQIFESTVSNMVEKGKIAEWPALVLYPDGTNGEVYNTTTQKWEM 288
Query: 531 LDTEDEYSILHYVPQWLEEGVN-----------IIGGCCEVTSYEIQQMR 569
D + + Q LE+ V ++GGCC S +I+++R
Sbjct: 289 PDGAENQRRTSWEGQ-LEDVVKATEGRGKWPAILVGGCCRAGSEDIKKLR 337
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 111/278 (39%), Gaps = 41/278 (14%)
Query: 6 KVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
K+ +LDG TS S++++ PLWSS L + DF D++ ++ Y
Sbjct: 4 KILILDGGLGTSLESKYSVTFSRSTPLWSSHLLVADQPTLQSCQSDFGAVPVDVLLTATY 63
Query: 65 QANVDNLTKL-------GYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH 117
Q ++ G S + L SV + A +
Sbjct: 64 QVSLHGFADTRTEEFPNGISRENVPRFLDDSVSIAERAVGDKGCV--------------- 108
Query: 118 IETAASIGPYGTVLRDGSEYSGHYVDSMTE-ADLIAWHRPNVEAL-----VRAGVDYLAL 171
A SIGPYG + G EYSG Y D DL +WHR + ++ + Y+AL
Sbjct: 109 ---ALSIGPYGACMIPGQEYSGKYDDKHDSLQDLESWHRERLGVFSEVNDIQKRLGYVAL 165
Query: 172 ETIPAEKEALALVKLLREFPGQKA---WLS-FSCKDDTHTSHGELISSAVTSCL--LANP 225
ETIP E +A+ K L P W + S + D G I +AV + L +
Sbjct: 166 ETIPRLDEIIAMRKALAATPALSKLPYWTALLSPEKDLRLPDGNSIEAAVEAMLDPEVSA 225
Query: 226 DQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNK 263
+ IG+NC + + +L++ + TV +V K
Sbjct: 226 NIPWGIGINCTKVDKLDSLLQIFES---TVSNMVEKGK 260
>gi|342869606|gb|EGU73226.1| hypothetical protein FOXB_16251 [Fusarium oxysporum Fo5176]
Length = 342
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 154/349 (44%), Gaps = 60/349 (17%)
Query: 265 VKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
+ +LDG TS S+++I PLWSS L ++ DF G + P
Sbjct: 5 ILILDGGLGTSLESKYSITFSRSTPLWSSHLLVSDQSTLQSCQSDF--GAV-------PV 55
Query: 324 GTVLRDGSEYSGH-YVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--TAASI 380
+L + S H + D+ T+ R V + D +++ + ++ + A SI
Sbjct: 56 DVLLTATYQVSLHGFADTRTDDFPEGIPRETVPRFLD---DAVSIAQRAVGDKGCVALSI 112
Query: 381 GPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEAL-----VRAGVDYLALETIP--- 431
GPYG + G EYSG Y + + ADL AWHR + ++ V Y+ALETIP
Sbjct: 113 GPYGACMIPGQEYSGKYDAEHDSLADLEAWHRERLGVFAEVSDIQKRVGYVALETIPRVD 172
Query: 432 ---AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ--- 485
A ++ALA L + P A L S + D G I +AV + L +P+
Sbjct: 173 EIIAMRKALAATPTLSDLPYWTACL--SPEKDLKMPDGNSIEAAVEAML--DPEVSTKLP 228
Query: 486 -AIGVNCVRPSHVSTLVRCIKQSHPTV----------QTIVYPN--KGGVWDSVHMKW-- 530
IG+NC + + L++ +++ + ++YP+ G V+++ KW
Sbjct: 229 WGIGINCTKVDKLDQLLQIFERTVAGMVEKGKITEWPALVLYPDGTNGEVYNTTTQKWEM 288
Query: 531 ---LDTEDEYSILHY---VPQWLEEGVN----IIGGCCEVTSYEIQQMR 569
++T S H V + E+ N ++GGCC S +I+++R
Sbjct: 289 PDGVETHRRSSWEHQLETVVKATEDRGNWPAILVGGCCRAGSEDIKKLR 337
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 112/270 (41%), Gaps = 46/270 (17%)
Query: 6 KVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
K+ +LDG TS S+++I PLWSS L ++ DF D++ ++ Y
Sbjct: 4 KILILDGGLGTSLESKYSITFSRSTPLWSSHLLVSDQSTLQSCQSDFGAVPVDVLLTATY 63
Query: 65 QANVDNLTKL-------GYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH 117
Q ++ G + L +V + A +
Sbjct: 64 QVSLHGFADTRTDDFPEGIPRETVPRFLDDAVSIAQRAVGDKGCV--------------- 108
Query: 118 IETAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEAL-----VRAGVDYLAL 171
A SIGPYG + G EYSG Y + + ADL AWHR + ++ V Y+AL
Sbjct: 109 ---ALSIGPYGACMIPGQEYSGKYDAEHDSLADLEAWHRERLGVFAEVSDIQKRVGYVAL 165
Query: 172 ETIP------AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP 225
ETIP A ++ALA L + P A L S + D G I +AV + L +P
Sbjct: 166 ETIPRVDEIIAMRKALAATPTLSDLPYWTACL--SPEKDLKMPDGNSIEAAVEAML--DP 221
Query: 226 DQIQ----AIGVNCVRPSHVSTLVRCIKQS 251
+ IG+NC + + L++ +++
Sbjct: 222 EVSTKLPWGIGINCTKVDKLDQLLQIFERT 251
>gi|302420871|ref|XP_003008266.1| homocysteine S-methyltransferase [Verticillium albo-atrum VaMs.102]
gi|261353917|gb|EEY16345.1| homocysteine S-methyltransferase [Verticillium albo-atrum VaMs.102]
Length = 355
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 112/263 (42%), Gaps = 42/263 (15%)
Query: 6 KVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
KV +LDG TS ++ ++ PLWSS L ++ + + +DF DII ++ Y
Sbjct: 8 KVLILDGGLGTSLGDKYGVRFDKSTPLWSSHMLVSDQDTLLACQKDFGDVPVDIILTATY 67
Query: 65 QANVDNLTKL-------GYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH 117
Q ++ G + ++ + +SA KEN
Sbjct: 68 QFSIHGFANTRTAQFPDGIDRTKIASYARDAIAIAHSAG-KENGG--------------- 111
Query: 118 IETAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAG-----VDYLAL 171
+ A S+GPYG + G EY+G Y ++ T DL AWH AG V Y+A+
Sbjct: 112 -QVALSVGPYGACMIPGQEYTGKYDLEHDTPEDLAAWHLERFRIFEEAGGFSSPVSYIAV 170
Query: 172 ETIPAEKEALALVKLLREFPGQKAWLSF--SC---KDDTHTSHGELISSAVTSCLLANP- 225
ET+P E +A K L + + A F +C ++ G ISSAV + L NP
Sbjct: 171 ETMPRLDEIVAARKALDDLGAKAANTPFWIACVFPGEEMALPDGASISSAVDAML--NPA 228
Query: 226 ---DQIQAIGVNCVRPSHVSTLV 245
Q IG+NC + + L+
Sbjct: 229 VARSQPWGIGINCTKIWKLKELI 251
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 142/346 (41%), Gaps = 53/346 (15%)
Query: 265 VKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
V +LDG TS ++ ++ PLWSS L ++ + + +DF G + P
Sbjct: 9 VLILDGGLGTSLGDKYGVRFDKSTPLWSSHMLVSDQDTLLACQKDF--GDV-------PV 59
Query: 324 GTVLRDGSEYSGH-YVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
+L ++S H + ++ T R + + R + Q A S+GP
Sbjct: 60 DIILTATYQFSIHGFANTRTAQFPDGIDRTKIASYARDAIAIAHSAGKENGGQVALSVGP 119
Query: 383 YGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAG-----VDYLALETIPAEKEA 436
YG + G EY+G Y ++ T DL AWH AG V Y+A+ET+P E
Sbjct: 120 YGACMIPGQEYTGKYDLEHDTPEDLAAWHLERFRIFEEAGGFSSPVSYIAVETMPRLDEI 179
Query: 437 LALVKLLREFPGQKAWLSF--SC---KDDTHTSHGELISSAVTSCLLANP----DQIQAI 487
+A K L + + A F +C ++ G ISSAV + L NP Q I
Sbjct: 180 VAARKALDDLGAKAANTPFWIACVFPGEEMALPDGASISSAVDAML--NPAVARSQPWGI 237
Query: 488 GVNCVRPSHVSTLVRCIKQS----------HPTVQTIVYPN--KGGVWDSVHMKW-LDTE 534
G+NC + + L+ + + + ++YP+ G V+++ W L
Sbjct: 238 GINCTKIWKLKELIAHFEAAVADQVQAGHVNEAPALVLYPDGTDGEVYNTTTQTWELPAG 297
Query: 535 DEYSILHYVPQWLEEGVN-----------IIGGCCEVTSYEIQQMR 569
+ + Q L E V ++GGCC+ + + ++R
Sbjct: 298 GKVQGAPWEEQ-LAEIVRDANTRGKWKQIVVGGCCKASHAHLARLR 342
>gi|145251449|ref|XP_001397238.1| homocysteine S-methyltransferase [Aspergillus niger CBS 513.88]
gi|134082772|emb|CAK48546.1| unnamed protein product [Aspergillus niger]
gi|350636548|gb|EHA24908.1| hypothetical protein ASPNIDRAFT_210376 [Aspergillus niger ATCC
1015]
Length = 353
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 146/355 (41%), Gaps = 63/355 (17%)
Query: 265 VKLLDGSFTSQVSRH--TIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
+ +LDG + + H PLWSS + ++P + RDF T A++
Sbjct: 6 ILILDGGLGTSLQDHYNITFSSSTTPLWSSHLMISDPSTLLSCQRDFT-----TTAAVDV 60
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
T S + + T + R ++ +R +D + S+ A S+GP
Sbjct: 61 LLTATYQVSPEG--FQRTKTPSHPTGIPRESIAGYLRTALDVAGQAVQNTSASVALSLGP 118
Query: 383 YGTVLRDGSEYSGHY-VDSMTEADLIAWHRP-----NVEAL--VRAG--VDYLALETIPA 432
YG + G EYSG Y + TE L WH N EA+ +R G V Y+A+ET+P
Sbjct: 119 YGACMIPGQEYSGKYDGEHDTEEKLWRWHTDRLGLFNDEAMEGMRLGERVKYIAMETVPR 178
Query: 433 EKEALALVKLL---REFPGQKAWLS--FSCKDDTHTSHGELISSAVTSCLL-----ANPD 482
E A+ + + R G W++ F +D G + V + LL A P
Sbjct: 179 IDEVRAVRRAVGSSRFCEGIPFWVACVFPIEDKDTLPDGSTVDEVVEAALLPIEGGATP- 237
Query: 483 QIQAIGVNCVRPSHVSTLVRCIK------------QSHPTVQTIVYPN--KGGVWDSVHM 528
IG+NC + + LV+ Q P + ++YP+ +G V+++
Sbjct: 238 --WGIGINCTKLHKLPRLVKLFGDAVERLLRDGRIQERPAL--VLYPDGTQGEVYNTATQ 293
Query: 529 KWLDTEDEYSILHYVPQW---LEEGVN-----------IIGGCCEVTSYEIQQMR 569
W +D+ P W L + VN ++GGCC+ + +I+++R
Sbjct: 294 TWEKVQDKSGAADSRP-WEVQLAQVVNDASATGQFSSILVGGCCKASFNDIKRLR 347
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 105/263 (39%), Gaps = 36/263 (13%)
Query: 7 VKLLDGSFTSQVSRH--TIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGA-DIIQSSC 63
+ +LDG + + H PLWSS + ++P + RDF A D++ ++
Sbjct: 6 ILILDGGLGTSLQDHYNITFSSSTTPLWSSHLMISDPSTLLSCQRDFTTTAAVDVLLTAT 65
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
YQ + + + + +A D Q + A S
Sbjct: 66 YQVSPEGFQRTKTPSHPTGIPRESIAGYLRTALDVAGQA----------VQNTSASVALS 115
Query: 124 IGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRP-----NVEAL--VRAG--VDYLALET 173
+GPYG + G EYSG Y + TE L WH N EA+ +R G V Y+A+ET
Sbjct: 116 LGPYGACMIPGQEYSGKYDGEHDTEEKLWRWHTDRLGLFNDEAMEGMRLGERVKYIAMET 175
Query: 174 IPAEKEALALVKLL---REFPGQKAWLS--FSCKDDTHTSHGELISSAVTSCLL-----A 223
+P E A+ + + R G W++ F +D G + V + LL A
Sbjct: 176 VPRIDEVRAVRRAVGSSRFCEGIPFWVACVFPIEDKDTLPDGSTVDEVVEAALLPIEGGA 235
Query: 224 NPDQIQAIGVNCVRPSHVSTLVR 246
P IG+NC + + LV+
Sbjct: 236 TP---WGIGINCTKLHKLPRLVK 255
>gi|336463783|gb|EGO52023.1| hypothetical protein NEUTE1DRAFT_89911 [Neurospora tetrasperma FGSC
2508]
Length = 361
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 124/294 (42%), Gaps = 44/294 (14%)
Query: 1 MSKICKVKLLDGSF-TSQVSRHTIKDVDGHPLWSS-VYLTTEPEACVETHRDFIRAGADI 58
M+ V++LDG T+ H I PLWSS + ++ E + + H F +AGA+I
Sbjct: 1 MATPIPVQILDGGMGTTLEDMHDITFSFETPLWSSHLLVSGEEDKLSDCHEAFKQAGANI 60
Query: 59 IQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHI 118
I ++ YQ +++ + LD+ + + DKE + P L++ L
Sbjct: 61 ISTATYQISINGFAATKAPKSGTLDVEREGI-------DKE-EIPRF-LSRAVVLAANAA 111
Query: 119 ET----AASIGPYGTVLRDGSEYSGHYVDSMTEAD-LIAWHRPNVEALVRAG---VDYLA 170
T A S+GPYG + +EYSG Y + L WH+ + V+Y+A
Sbjct: 112 GTEGKVALSLGPYGATMIPSTEYSGRYDPEHQDVQALEKWHKERLNLFKDVDPNHVNYIA 171
Query: 171 LETIPAEKEALALVKLLR------EFPGQKAWLSFSC-KDDTHTSHGELISSAVTSCL-- 221
ET+P E +A+ LL G+ W+S DD G + AV + L
Sbjct: 172 FETVPRLDEIVAIRNLLSVDNIPTSLRGRPVWISTPYPNDDGKLPDGSTVEEAVKAVLTH 231
Query: 222 ---LANPDQIQAIGVNCVRPSHVSTLVR--------CIKQSHPTV--QTIVYPN 262
L P IG+NC + + +LV+ CIK ++YP+
Sbjct: 232 REGLETP---WGIGINCTKVEKLDSLVKRYEDAIQTCIKNGERMAWPSLVLYPD 282
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 44/258 (17%)
Query: 357 LVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEAD-LIAWHRPNVE 415
L RA V LA + A S+GPYG + +EYSG Y + L WH+ +
Sbjct: 100 LSRAVV--LAANAAGTEGKVALSLGPYGATMIPSTEYSGRYDPEHQDVQALEKWHKERLN 157
Query: 416 ALVRAG---VDYLALETIPAEKEALALVKLLR------EFPGQKAWLSFSC-KDDTHTSH 465
V+Y+A ET+P E +A+ LL G+ W+S DD
Sbjct: 158 LFKDVDPNHVNYIAFETVPRLDEIVAIRNLLSVDNIPTSLRGRPVWISTPYPNDDGKLPD 217
Query: 466 GELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTLVR--------CIKQSHPTV- 511
G + AV + L L P IG+NC + + +LV+ CIK
Sbjct: 218 GSTVEEAVKAVLTHREGLETP---WGIGINCTKVEKLDSLVKRYEDAIQTCIKNGERMAW 274
Query: 512 -QTIVYPN--KGGVWDSVHMKW------LDTEDEY-SILHYVPQWLEEGVN----IIGGC 557
++YP+ KG V+++ W TE + ++L V + + N ++GGC
Sbjct: 275 PSLVLYPDGTKGEVYNTATKTWELSPGHKQTETPWETVLAGVVEAARQRGNWKSIVVGGC 334
Query: 558 CEVTSYEIQQMRIMIDEF 575
C+ + I+++R + ++
Sbjct: 335 CKASPEHIRRLRRTLQDY 352
>gi|390601844|gb|EIN11237.1| Homocysteine S-methyltransferase, partial [Punctularia
strigosozonata HHB-11173 SS5]
Length = 378
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 22 TIKDVDG----HPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYS 77
T++D G HPLWS+ L +P+ + H F+RAGA +I +S YQ + D + GY
Sbjct: 3 TLEDAFGQDIAHPLWSAKLLADDPDPIIAAHLGFLRAGARVILTSSYQCSFDTFARAGYP 62
Query: 78 EQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEY 137
++A L+ +SV L +SA + L++ +L I A S+GPYG EY
Sbjct: 63 PEQARSLMLQSVSLASSAA-------HLFLSERPDLSRSDITIALSLGPYGAACVPTQEY 115
Query: 138 SGHY 141
G Y
Sbjct: 116 DGCY 119
>gi|213409525|ref|XP_002175533.1| homocysteine methyltransferase [Schizosaccharomyces japonicus
yFS275]
gi|212003580|gb|EEB09240.1| homocysteine methyltransferase [Schizosaccharomyces japonicus
yFS275]
Length = 314
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 144/326 (44%), Gaps = 45/326 (13%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG TS + + D+ LW+S L P+ E H +F+ GP +
Sbjct: 3 VLDGGSTSILPKLP-NDILKSKLWTSEALVRFPDQVREQHTEFL----------GPCNVI 51
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ----TAASIGP 382
S Y+ +S+ + A ++ + G++ L L S+Q A S+G
Sbjct: 52 ----STYTYQLDESIYDE---AEENAPLDVVYSRGME-LPLQAKQQSAQANRFVAISLGS 103
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR------AGVDYLALETIPAEKEA 436
Y + EY+ Y D L +H+ +E + R A +D+LA E++P EA
Sbjct: 104 YAATVPGAMEYNMVY-DEEDFDKLYNFHKRRLERMQRSNPKAFASIDFLAFESLPHVVEA 162
Query: 437 LALVKLLREFPG--QKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
A++KL+ + G ++ W++F+C + I +V L + GVNC
Sbjct: 163 SAVLKLIDDMKGYGKRCWITFTCPSVEAIDRVDGILESVMKGPLT---YLWGTGVNCCHI 219
Query: 495 SHVSTLVRCIKQ---SHPTVQTIVYPNKGGVWDS-----VHMKWLDTEDEYSILHYVPQW 546
S + + +++ HPT+ ++YP+ G+W++ + E ++ YV
Sbjct: 220 SLLPQIANVLEKHISPHPTLHAVLYPDGRGLWNAHPYSPNGIAPTPREWAQAVAPYV--R 277
Query: 547 LEEGVNIIGGCCEVTSYEIQQMRIMI 572
L +G ++GGCCE T +Q +R +I
Sbjct: 278 LNDGKLLLGGCCETTVEHLQILRDLI 303
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 116/266 (43%), Gaps = 34/266 (12%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG TS + + D+ LW+S L P+ E H +F+ ++I + YQ +
Sbjct: 3 VLDGGSTSILPKLP-NDILKSKLWTSEALVRFPDQVREQHTEFL-GPCNVISTYTYQ--L 58
Query: 69 DNLTKLGYSEQEALDLLH-KSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPY 127
D E LD+++ + ++L AK + Q A S+G Y
Sbjct: 59 DESIYDEAEENAPLDVVYSRGMELPLQAKQQSAQANRF--------------VAISLGSY 104
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR------AGVDYLALETIPAEKEAL 181
+ EY+ Y D L +H+ +E + R A +D+LA E++P EA
Sbjct: 105 AATVPGAMEYNMVY-DEEDFDKLYNFHKRRLERMQRSNPKAFASIDFLAFESLPHVVEAS 163
Query: 182 ALVKLLREFP--GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 239
A++KL+ + G++ W++F+C + I +V L + GVNC S
Sbjct: 164 AVLKLIDDMKGYGKRCWITFTCPSVEAIDRVDGILESVMKGPLT---YLWGTGVNCCHIS 220
Query: 240 HVSTLVRCIKQ---SHPTVQTIVYPN 262
+ + +++ HPT+ ++YP+
Sbjct: 221 LLPQIANVLEKHISPHPTLHAVLYPD 246
>gi|255712221|ref|XP_002552393.1| KLTH0C03850p [Lachancea thermotolerans]
gi|238933772|emb|CAR21955.1| KLTH0C03850p [Lachancea thermotolerans CBS 6340]
Length = 329
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 15/205 (7%)
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL-VRAGVDYLALETIPAEKEALA 438
IGP+G + SE++G Y + D + + +P ++ V +D + ETIP E A
Sbjct: 128 IGPWGA--HNCSEFTGDYGSEPEKIDYLQYFKPQLDNFTVNDDLDLIGFETIPNIHELRA 185
Query: 439 LVKLLREFPGQKAWLSFSCKD-----DTHTSH--GELISSAVTSCLLANPDQIQAIGVNC 491
++ + ++ S + D T H ELI S NP+ + +G+NC
Sbjct: 186 ILSWDTTILPKPFYIGLSVHEHGVLRDGTTMHEVAELIKSLGDKI---NPNFV-LLGINC 241
Query: 492 VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDE-YSILHYVPQWLEEG 550
V +H ++R + Q P + I YPN G V+D+V W D + V +++ G
Sbjct: 242 VSYNHSPEILRSLHQEIPELPLIAYPNSGEVYDTVKKIWNPKGDHTLTWDQVVKSYIDSG 301
Query: 551 VNIIGGCCEVTSYEIQQMRIMIDEF 575
IIGGCC + +I + ++++
Sbjct: 302 ARIIGGCCRTSPKDIAAINAAVNKY 326
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 121/279 (43%), Gaps = 44/279 (15%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP------------EACVETHRDFIR 53
+V +LDG +++ IK +P+WS++ ++ + E + DF++
Sbjct: 16 EVLVLDGGQGTELENRGIKV--ANPVWSTIPFISDSFWTANDSSSKDRQIVKEMYEDFLK 73
Query: 54 AGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNL 113
AGA ++ + YQA+ ++ SE ++ L + L++ ++ + +
Sbjct: 74 AGARVLMTVTYQASFKSV-----SENTSITTLEEYDALLSRI-----------VSFSRSC 117
Query: 114 LTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL-VRAGVDYLALE 172
+ IGP+G + SE++G Y + D + + +P ++ V +D + E
Sbjct: 118 IGDDKWLVGCIGPWGA--HNCSEFTGDYGSEPEKIDYLQYFKPQLDNFTVNDDLDLIGFE 175
Query: 173 TIPAEKEALALVKLLREFPGQKAWLSFSCKD-----DTHTSH--GELISSAVTSCLLANP 225
TIP E A++ + ++ S + D T H ELI S NP
Sbjct: 176 TIPNIHELRAILSWDTTILPKPFYIGLSVHEHGVLRDGTTMHEVAELIKSLGDKI---NP 232
Query: 226 DQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+ + +G+NCV +H ++R + Q P + I YPN G
Sbjct: 233 NFV-LLGINCVSYNHSPEILRSLHQEIPELPLIAYPNSG 270
>gi|443899418|dbj|GAC76749.1| homocysteine S-methyltransferase [Pseudozyma antarctica T-34]
Length = 503
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 35/203 (17%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE---------ACVETHRDFIRAGA 56
++ +LDG + + D+ PLWS+ L + + + H +++AGA
Sbjct: 82 RIGVLDGGLATYLEDGLNFDLSKGPLWSARLLDEKEDDVSNGKGQKGIFDAHLHYLQAGA 141
Query: 57 DIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG 116
II +S YQA++++ + Y ++ A ++ K+V L A + N + N L++
Sbjct: 142 GIIGTSTYQASLESFERAQYDQESASRIMSKAVDLACEAVNTYNSSS----NAVRPLIS- 196
Query: 117 HIETAASIGPYGTVLRDGSEYSGHYVDS-MTEAD-----------LIAWHRPNVEALVR- 163
S+GPYG +L +G+EY+G Y + + E+D + A+H+ +EA V
Sbjct: 197 -----LSLGPYGAMLSNGAEYTGDYRRTFLAESDPQREQQPSIEEMAAFHQRRIEAFVVQ 251
Query: 164 ---AGVDYLALETIPAEKEALAL 183
V LA+ET+P EALA
Sbjct: 252 PSWKDVGVLAVETVPRADEALAF 274
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 20/88 (22%)
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDS-MTEAD-----------LIAWHRPNVE 415
++P IS S+GPYG +L +G+EY+G Y + + E+D + A+H+ +E
Sbjct: 191 VRPLIS----LSLGPYGAMLSNGAEYTGDYRRTFLAESDPQREQQPSIEEMAAFHQRRIE 246
Query: 416 ALVR----AGVDYLALETIPAEKEALAL 439
A V V LA+ET+P EALA
Sbjct: 247 AFVVQPSWKDVGVLAVETVPRADEALAF 274
>gi|400293061|ref|ZP_10794946.1| homocysteine S-methyltransferase family protein [Actinomyces
naeslundii str. Howell 279]
gi|399901767|gb|EJN84637.1| homocysteine S-methyltransferase family protein [Actinomyces
naeslundii str. Howell 279]
Length = 156
Score = 74.7 bits (182), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 5/150 (3%)
Query: 421 GVDYLALETIPAEKEALALVKLLREF-PGQKAWLSFSCKDD-THTSHGELISSAVTSCLL 478
GVD ALET+P EA AL+ +++ P + W+SF + D T + G ++ A
Sbjct: 4 GVDLFALETLPRLDEAQALLAMVKVLAPQAECWISFQVRSDGTRLADGTPLAEAAAW--A 61
Query: 479 ANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYS 538
A + A+G+NCV P V + ++ + + YPN G ++D V W +E
Sbjct: 62 AQEGMVVAVGINCVAPDVVGRALPVLRTATDK-PLVAYPNAGELYDPVTESWRSAGEEGG 120
Query: 539 ILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
++ W+ G ++GGCC +I+++
Sbjct: 121 LVELASSWIAAGARLVGGCCRTRPAQIREL 150
Score = 46.2 bits (108), Expect = 0.054, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 165 GVDYLALETIPAEKEALALVKLLREF-PGQKAWLSFSCKDD-THTSHGELISSAVTSCLL 222
GVD ALET+P EA AL+ +++ P + W+SF + D T + G ++ A
Sbjct: 4 GVDLFALETLPRLDEAQALLAMVKVLAPQAECWISFQVRSDGTRLADGTPLAEAAAW--A 61
Query: 223 ANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
A + A+G+NCV P V + ++ + + YPN G
Sbjct: 62 AQEGMVVAVGINCVAPDVVGRALPVLRTATDK-PLVAYPNAG 102
>gi|367003831|ref|XP_003686649.1| hypothetical protein TPHA_0G03760 [Tetrapisispora phaffii CBS 4417]
gi|357524950|emb|CCE64215.1| hypothetical protein TPHA_0G03760 [Tetrapisispora phaffii CBS 4417]
Length = 331
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 90/190 (47%), Gaps = 7/190 (3%)
Query: 391 SEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEALALVKLLREFPGQ 449
+E+ G Y + D + +P ++ +D + ET+P E A++ + +
Sbjct: 135 AEFHGDYGEHPENIDFYEYFKPQLDNFFNNNKLDLIGFETVPNIHELKAILSWDEKILSK 194
Query: 450 KAWLSFSCKDD----THTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 505
++ S ++ TS E+ + NP+ + +G+NCV +H + +++ I
Sbjct: 195 PFYIGLSVHENGLLRDGTSMQEVANLIKGFGEKLNPN-LTLLGINCVSYNHSNDIIKSIH 253
Query: 506 QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDE-YSILHYVPQWLEEGVNIIGGCCEVTSYE 564
+ P + I YPN G ++D+ WL ++ ++ V ++E GV IIGGCC T +
Sbjct: 254 KELPNLPLIAYPNSGEIYDTTKKIWLPNKNPIFTWDDIVKGYIEAGVRIIGGCCRTTPND 313
Query: 565 IQQMRIMIDE 574
I+ + I + E
Sbjct: 314 IKAVTIAVKE 323
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 113/274 (41%), Gaps = 36/274 (13%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP----------EACVETHRDFIRAG 55
KV ++DG +++ IK + P+WS++ +E + E DFI AG
Sbjct: 16 KVLVMDGGQGTELENRGIKVAN--PVWSTIPFISESFWSDQSSEDRKIVKEMFNDFINAG 73
Query: 56 ADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLT 115
A+I+ ++ YQ + ++ SE + +L+N D + +
Sbjct: 74 AEILMTTTYQTSFKSV-----SENTPIKNTKHYNELLNRIIDFSR-----------DCIG 117
Query: 116 GHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETI 174
IG +G + +E+ G Y + D + +P ++ +D + ET+
Sbjct: 118 EERYLIGCIGSWGAHI--CAEFHGDYGEHPENIDFYEYFKPQLDNFFNNNKLDLIGFETV 175
Query: 175 PAEKEALALVKLLREFPGQKAWLSFSCKDD----THTSHGELISSAVTSCLLANPDQIQA 230
P E A++ + + ++ S ++ TS E+ + NP+ +
Sbjct: 176 PNIHELKAILSWDEKILSKPFYIGLSVHENGLLRDGTSMQEVANLIKGFGEKLNPN-LTL 234
Query: 231 IGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+G+NCV +H + +++ I + P + I YPN G
Sbjct: 235 LGINCVSYNHSNDIIKSIHKELPNLPLIAYPNSG 268
>gi|255720274|ref|XP_002556417.1| KLTH0H12716p [Lachancea thermotolerans]
gi|238942383|emb|CAR30555.1| KLTH0H12716p [Lachancea thermotolerans CBS 6340]
Length = 348
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 117/264 (44%), Gaps = 51/264 (19%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYL----TTEPEACVETHRDFIRAGADIIQSS 62
+ LLDG +++ + + HPLWS++ T EA E +RDF AG++ + +
Sbjct: 13 ILLLDGGQGTELEKKGVSI--SHPLWSTLPFIIKNKTHLEAIKEMYRDFAEAGSNALMTI 70
Query: 63 CYQANVDNLTK----LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHI 118
YQA+ ++ K L SE++ L + D+E TPD L
Sbjct: 71 TYQASFSSMKKYSEGLVNSEEDYAAFLDYVIGFT----DRECITPDKYL----------- 115
Query: 119 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL-VRAGVDYLALETIPAE 177
S+GPY +L +G+EYSG+Y + + D I ++ P V+ + +D + +ETIP
Sbjct: 116 --VGSVGPYAGLLSNGAEYSGYYGEG--KIDFIDYYSPQVKHFALSPRIDLIGIETIPNI 171
Query: 178 KEALALVKLLREFPGQKAWLSFS-------------CKDDTHTSHGELISSAVTSCLLAN 224
E AL L EF + LSFS C D TS E+ + S L
Sbjct: 172 DEFKAL--LSPEF----SRLSFSKPYYISVTTDNNGCLRDG-TSLNEICRAIKQSASLL- 223
Query: 225 PDQIQAIGVNCVRPSHVSTLVRCI 248
PD +NCV H +++ +
Sbjct: 224 PDNFVFFAINCVEFLHCVEILQSL 247
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 143/346 (41%), Gaps = 60/346 (17%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYL----TTEPEACVETHRDFIRGHIETAASI 320
+ LLDG +++ + + HPLWS++ T EA E +RDF +I
Sbjct: 13 ILLLDGGQGTELEKKGVSI--SHPLWSTLPFIIKNKTHLEAIKEMYRDFAEAGSNALMTI 70
Query: 321 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASI 380
Y +YS V+S E D A+ ++ ++ G I P S+
Sbjct: 71 -TYQASFSSMKKYSEGLVNS--EEDYAAF----LDYVI--GFTDRECITPD--KYLVGSV 119
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL-VRAGVDYLALETIPAEKEALAL 439
GPY +L +G+EYSG+Y + + D I ++ P V+ + +D + +ETIP E AL
Sbjct: 120 GPYAGLLSNGAEYSGYYGEG--KIDFIDYYSPQVKHFALSPRIDLIGIETIPNIDEFKAL 177
Query: 440 VKLLREFPGQKAWLSFS-------------CKDDTHTSHGELISSAVTSCLLANPDQIQA 486
L EF + LSFS C D TS E+ + S L PD
Sbjct: 178 --LSPEF----SRLSFSKPYYISVTTDNNGCLRDG-TSLNEICRAIKQSASLL-PDNFVF 229
Query: 487 IGVNCVRPSH----VSTLVRCIKQSHPTVQTIV---YPNKGGVWDSVHMKWLDT-----E 534
+NCV H + +L C++ + YPN G ++ W E
Sbjct: 230 FAINCVEFLHCVEILQSLNDCLEMQGVDRRFRFRGAYPNSGEIYHGGTHSWSSNPYAGPE 289
Query: 535 DEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEFNTKKN 580
D + L L + ++GGCC S EI+QM + TKKN
Sbjct: 290 DTWENL--TLGLLSQECLMLGGCCRTGSEEIRQMAL-----TTKKN 328
>gi|71006536|ref|XP_757934.1| hypothetical protein UM01787.1 [Ustilago maydis 521]
gi|46097252|gb|EAK82485.1| hypothetical protein UM01787.1 [Ustilago maydis 521]
Length = 448
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 31/206 (15%)
Query: 5 CKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE---------ACVETHRDFIRAG 55
++ +LDG + + D+ PLWS+ L + + + H +++AG
Sbjct: 17 ARIGILDGGLATYLEDGLDFDLSKGPLWSARLLDEKEDDVSDGKGQKGIFDAHLHYLQAG 76
Query: 56 ADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNK--TFNL 113
A II ++ YQA++++ + Y + A L+ K+V L A N I+ NK +
Sbjct: 77 AGIIGTATYQASLESFARANYDQVSASHLMSKAVDLACDALHAHN----ISNNKVGVASA 132
Query: 114 LTGHIETAASIGPYGTVLRDGSEYSGHYVDS-MTEAD-----------LIAWHRPNVEAL 161
+ + S+GPYG +L +G+EY+G Y + + E+D ++A+H+ +EA
Sbjct: 133 ASARPLLSLSLGPYGAMLSNGAEYTGDYRRTFLAESDPLREQQPSLEEMMAFHQRRIEAF 192
Query: 162 VRAG----VDYLALETIPAEKEALAL 183
+ V LA+ET+P EALA
Sbjct: 193 IAQPSWEHVGVLAVETVPRADEALAF 218
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 90/441 (20%), Positives = 157/441 (35%), Gaps = 133/441 (30%)
Query: 254 TVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE---------ACVE 304
+++++ P + + +LDG + + D+ PLWS+ L + + +
Sbjct: 9 ALESLLSPAR-IGILDGGLATYLEDGLDFDLSKGPLWSARLLDEKEDDVSDGKGQKGIFD 67
Query: 305 THRDFIR---GHIETA---ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV 358
H +++ G I TA AS+ + D S H + + A H N+
Sbjct: 68 AHLHYLQAGAGIIGTATYQASLESFARANYDQVSAS-HLMSKAVDLACDALHAHNISN-N 125
Query: 359 RAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDS-MTEAD-----------L 406
+ GV A +P +S S+GPYG +L +G+EY+G Y + + E+D +
Sbjct: 126 KVGVASAASARPLLS----LSLGPYGAMLSNGAEYTGDYRRTFLAESDPLREQQPSLEEM 181
Query: 407 IAWHRPNVEALVRAG----VDYLALETIPAEKEALALVKLL-----------REFPGQKA 451
+A+H+ +EA + V LA+ET+P EALA L R +
Sbjct: 182 MAFHQRRIEAFIAQPSWEHVGVLAVETVPRADEALAFRMALENVARSLEQQGRPLERKPV 241
Query: 452 WLSFSCKDDTHTSHGELISSA-----------------------------------VTSC 476
++S + DD + S+ VT
Sbjct: 242 YISMAFPDDRRLPWPPVKKSSAAGQEGDVDMDEDNDEDEVEDEEAIQEEMNWLVQIVTDT 301
Query: 477 LLANPDQ---IQAIGVNCVRPSHVSTLVRCIKQSHPTVQ--------------------- 512
+ D I IG+NC +P + LV + S T+
Sbjct: 302 QVQGQDSLWPISGIGINCTKPYLLPKLVERMSASLVTLNLPASEGGMDLESRRGALGLPK 361
Query: 513 --TIVYPNKGGVWDSVHMKWLDTEDEYSILH---YVPQWLEEGVNI-------------- 553
+YP+ G V+D+V WL + + H W + +
Sbjct: 362 PLLFLYPDGGLVYDAVRKIWLTPSNAGDLGHGDNSAASWASNLMKLAKSITAGSDAKLPD 421
Query: 554 ------IGGCCEVTSYEIQQM 568
+GGCC+ + EI+ +
Sbjct: 422 VWRGVFVGGCCKSGTDEIRAL 442
>gi|395332845|gb|EJF65223.1| Homocysteine S-methyltransferase [Dichomitus squalens LYAD-421 SS1]
Length = 384
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 18 VSRHTIKDVD----GHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTK 73
V T++DV G+PLWS+ + +PEA + H F+RAG D+I +S YQA
Sbjct: 6 VQGTTLEDVFRQKLGYPLWSATPVDKDPEAIISAHLAFLRAGVDVITTSTYQAAYRTYEI 65
Query: 74 LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRD 133
GYS ++A L+ ++V+L AK + Q N T + ++ A S+GPYG L
Sbjct: 66 AGYSREDAKRLMLEAVKLAIEAKRRYLQEIGQN-GGTDAEPSRRVKIALSLGPYGGTLSP 124
Query: 134 GSEYSGHY 141
E++G Y
Sbjct: 125 AQEFNGFY 132
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 135/378 (35%), Gaps = 91/378 (24%)
Query: 276 VSRHTIKDVD----GHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGS 331
V T++DV G+PLWS+ + +PEA + H F+R ++ + Y R
Sbjct: 6 VQGTTLEDVFRQKLGYPLWSATPVDKDPEAIISAHLAFLRAGVDVITT-STYQAAYRT-Y 63
Query: 332 EYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALI--------KPSISSQTAASIGPY 383
E +G+ + L A V+ + A YL I +PS + A S+GPY
Sbjct: 64 EIAGYSREDAKRLMLEA-----VKLAIEAKRRYLQEIGQNGGTDAEPSRRVKIALSLGPY 118
Query: 384 GTVLRDGSEYSGHYVD-------------------------SMTEADLIAWHRPNVEAL- 417
G L E++G Y SM L +H +E
Sbjct: 119 GGTLSPAQEFNGFYPPPFGPASSGAFESNVFSDTEEGLKQLSMAIEALEEFHYERLEVFA 178
Query: 418 ----VRAGVDYLALETIPAEKEALALVKLLREFPGQKA------------------WLSF 455
V +D++A ET+P +E + + + + K W+S
Sbjct: 179 ENREVWDEIDFVAFETVPLRREITGIRRAVAKLQKTKGLEQVARSGASEVNTMKRWWIST 238
Query: 456 SCKD----DTHTSHGELISSAVTSCLLANPDQIQAI----GVNCVRPSHVSTLV------ 501
D + G+ + V L D+ ++ G+NC P + L+
Sbjct: 239 VYPDGRYPEMKPGGGQATVAEVAEAALLGEDERLSVPWGFGINCTSPEFLPPLLQEARDV 298
Query: 502 --RCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYS--ILHYVPQWLEE------GV 551
R + ++YPN G V++ WL + S H ++ G
Sbjct: 299 ARRSWELHGVKPWLVLYPNGGDVYNPETHSWLGQREGVSGWATHLCAAVMDNARDGVWGG 358
Query: 552 NIIGGCCEVTSYEIQQMR 569
+GGCC+ EI ++R
Sbjct: 359 IAVGGCCKTGPDEISELR 376
>gi|402224461|gb|EJU04524.1| Homocysteine S-methyltransferase [Dacryopinax sp. DJM-731 SS1]
Length = 388
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 121/312 (38%), Gaps = 70/312 (22%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG + + + V HPLWS L PE V+TH F+ AGAD+I+++ YQ+ +
Sbjct: 10 ILDGGLGTTIEELD-EQVTHHPLWSGKLLHDNPELLVDTHLRFLEAGADVIETATYQSCL 68
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ GY ++EA + ++ L A + Q+ + A S+GPYG
Sbjct: 69 PTFVRAGYEQEEAQASILSAITLAEEAIRRFEQSSGTHRRPL---------VALSLGPYG 119
Query: 129 TVLRDGSEYSGHYV------------------------DSMTEADLIAWHRPNVEALVRA 164
+ EY G Y + + E L WH + +
Sbjct: 120 AQITQ--EYGGIYPPPYGPSIGANILPAPETSFASPEEEVLAELALTQWHFDRLLLFATS 177
Query: 165 -----GVDYLALETIPAEKEALALVKLL---------REFPGQKAWLSFSCKD----DTH 206
+ Y+A ETIP +E A+ + + R K W+SF + +
Sbjct: 178 PSHWNSISYIAFETIPLLREGRAIRRAMTRLRPMAEARGLIWPKWWISFVFPEGKFPEVK 237
Query: 207 TSHGELISSAVTSCLLANPDQIQ------AIGVNCVRPSHVSTLV--------RCIKQSH 252
TS ++ + + + D+ + IG NC + + ++ R K
Sbjct: 238 TSGEPILPQDIANAMFDAEDERRNILIPDGIGANCTKLQFLKPIIIGYGEGLHRSSKGRP 297
Query: 253 PTVQTIVYPNKG 264
P + ++YP+ G
Sbjct: 298 P--ELVLYPDGG 307
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 136/389 (34%), Gaps = 104/389 (26%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIGPY 323
+LDG + + + V HPLWS L PE V+TH F+ IETA
Sbjct: 10 ILDGGLGTTIEELD-EQVTHHPLWSGKLLHDNPELLVDTHLRFLEAGADVIETATYQSCL 68
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPY 383
T +R G Y +A +++ EA+ R +P + A S+GPY
Sbjct: 69 PTFVRAG------YEQEEAQASILSAITLAEEAIRRFEQSSGTHRRPLV----ALSLGPY 118
Query: 384 GTVLRDGSEYSGHYV------------------------DSMTEADLIAWHRPNVEALVR 419
G + EY G Y + + E L WH +
Sbjct: 119 GAQITQ--EYGGIYPPPYGPSIGANILPAPETSFASPEEEVLAELALTQWHFDRLLLFAT 176
Query: 420 A-----GVDYLALETIPAEKEALALVKLL---------REFPGQKAWLSFSCKD----DT 461
+ + Y+A ETIP +E A+ + + R K W+SF + +
Sbjct: 177 SPSHWNSISYIAFETIPLLREGRAIRRAMTRLRPMAEARGLIWPKWWISFVFPEGKFPEV 236
Query: 462 HTSHGELISSAVTSCLLANPDQIQ------AIGVNCVRPSHVSTLV--------RCIKQS 507
TS ++ + + + D+ + IG NC + + ++ R K
Sbjct: 237 KTSGEPILPQDIANAMFDAEDERRNILIPDGIGANCTKLQFLKPIIIGYGEGLHRSSKGR 296
Query: 508 HPTVQTIVYPNKG-------GVWDSVHMKWLDTEDEY------------------SILHY 542
P + ++YP+ G G W + H+ TE + + Y
Sbjct: 297 PP--ELVLYPDGGYHYDTNEGAWQAPHLNRDGTERRADGVLEPWARSVARIGAWGAQMTY 354
Query: 543 V--PQWLEEGVNIIGGCCEVTSYEIQQMR 569
P W I+GGCC+ +I ++
Sbjct: 355 AGRPMW---SALIVGGCCKTLPLDIAALK 380
>gi|401837865|gb|EJT41719.1| MHT1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 325
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 121/272 (44%), Gaps = 33/272 (12%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP---------EACVETHRDFIRAGA 56
+V +LDG +++ I G P+WS+ T++ E E +RDF+ AGA
Sbjct: 16 RVLVLDGGQGTELENRGINI--GGPVWSATPFTSDSFWEQSSHDREVVEEMYRDFMNAGA 73
Query: 57 DIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG 116
+++ + YQAN ++++ + S+Q +++ N D ++ T +
Sbjct: 74 NVLMTITYQANFKSISE------------NTSIQTLSAY----NGFLDRIVSFTRRFIGE 117
Query: 117 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL-VRAGVDYLALETIP 175
SIGP+ + SEY+G+Y + D + +P +++ +D + ET+P
Sbjct: 118 ERYLVGSIGPWAAHV--SSEYTGNYGPHPEDIDYYNFFKPQLDSFNENKDIDLIGFETVP 175
Query: 176 AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIG 232
E A++ + + ++ S D+ G E +S+ + + +G
Sbjct: 176 NFHELKAILSWGEDIISKPFYVGLSVHDNGLLRDGTTMEEVSAHIKGLGSRINKHLLLMG 235
Query: 233 VNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
VNC+ + + ++R + +S P +VYPN G
Sbjct: 236 VNCISFNRSTLILRTLHESLPDTPLLVYPNSG 267
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 138/332 (41%), Gaps = 37/332 (11%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP---------EACVETHRDFI 310
YP + V +LDG +++ I G P+WS+ T++ E E +RDF+
Sbjct: 13 YPTR-VLVLDGGQGTELENRGINI--GGPVWSATPFTSDSFWEQSSHDREVVEEMYRDFM 69
Query: 311 RGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKP 370
+I Y + SE T ++ + ++ +V ++ +
Sbjct: 70 NAGANVLMTI-TYQANFKSISE--------NTSIQTLSAYNGFLDRIVSFTRRFIGEER- 119
Query: 371 SISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL-VRAGVDYLALET 429
SIGP+ + SEY+G+Y + D + +P +++ +D + ET
Sbjct: 120 ----YLVGSIGPWAAHV--SSEYTGNYGPHPEDIDYYNFFKPQLDSFNENKDIDLIGFET 173
Query: 430 IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQA 486
+P E A++ + + ++ S D+ G E +S+ + +
Sbjct: 174 VPNFHELKAILSWGEDIISKPFYVGLSVHDNGLLRDGTTMEEVSAHIKGLGSRINKHLLL 233
Query: 487 IGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW---LDTEDEYSILHYV 543
+GVNC+ + + ++R + +S P +VYPN G V+D W D + + I V
Sbjct: 234 MGVNCISFNRSTLILRTLHESLPDTPLLVYPNSGEVYDVKEKTWHWPTDKPESWDIT--V 291
Query: 544 PQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEF 575
+++ G IIGGCC + +I ++ + +
Sbjct: 292 KTFIDSGARIIGGCCRTSPKDIAEIATAVRRY 323
>gi|392865651|gb|EAS31457.2| hypothetical protein CIMG_11788 [Coccidioides immitis RS]
Length = 377
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 29/271 (10%)
Query: 1 MSK-ICKVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGAD 57
MSK I + LLDG+ + + + PLWSS L + P E HR ++ AGAD
Sbjct: 1 MSKHIPNILLLDGAMGTVLEEPPYGFTFSAQTPLWSSHLLLSHPTTLSEIHRSYVDAGAD 60
Query: 58 IIQSSCYQANVDNLTKLGY--------SEQEALDLLHKSVQLMNSAKDKENQTPDINLNK 109
I+ ++ YQA+ + + +Q+ D H + + M++ + + P
Sbjct: 61 IVLTATYQASFEGFARTAIVPANVPADHKQDERD-GHATYRPMDATRYMRSAIP--LAYS 117
Query: 110 TFNLLTGHIETAASIGPYG-TVLRDGSEYSGHYVDSMTE-ADLIAWHRPNVEALVR---- 163
+FN + A S+GPYG T+ +EY+G Y + M+ A L AWH ++ +
Sbjct: 118 SFNFSSKPPRVALSLGPYGATMCPVSAEYTGIYPEEMSNTAALEAWHANRLKVYMEDPET 177
Query: 164 -AGVDYLALETIPAEKEALA-------LVKLLREFPGQKAWLS-FSCKDDTHTSHGELIS 214
+++L ET+ E LA L+++ +K W++ ++D +
Sbjct: 178 WRKIEFLGFETVRRWDEVLAIRGAMGKLLQIAESGQSRKWWITGVFPQEDIDEEDVRRWT 237
Query: 215 SAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
SA N + IGVNC R +V +V
Sbjct: 238 SAAFGSTSENGLRPWGIGVNCTRLENVERIV 268
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 144/346 (41%), Gaps = 67/346 (19%)
Query: 288 PLWSSVYLTTEPEACVETHRDFIRGHIE-------TAASIGPYGTVLRDGSEYSGHYVDS 340
PLWSS L + P E HR ++ + A+ G T + + + H D
Sbjct: 33 PLWSSHLLLSHPTTLSEIHRSYVDAGADIVLTATYQASFEGFARTAIVPANVPADHKQD- 91
Query: 341 MTEADLIAWHRP-NVEALVRAGVD--YLALIKPSISSQTAASIGPYG-TVLRDGSEYSGH 396
E D A +RP + +R+ + Y + S + A S+GPYG T+ +EY+G
Sbjct: 92 --ERDGHATYRPMDATRYMRSAIPLAYSSFNFSSKPPRVALSLGPYGATMCPVSAEYTGI 149
Query: 397 YVDSMTE-ADLIAWHRPNVEALVR-----AGVDYLALETIPAEKEALA-------LVKLL 443
Y + M+ A L AWH ++ + +++L ET+ E LA L+++
Sbjct: 150 YPEEMSNTAALEAWHANRLKVYMEDPETWRKIEFLGFETVRRWDEVLAIRGAMGKLLQIA 209
Query: 444 REFPGQKAWLS-FSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
+K W++ ++D +SA N + IGVNC R +V +V
Sbjct: 210 ESGQSRKWWITGVFPQEDIDEEDVRRWTSAAFGSTSENGLRPWGIGVNCTRLENVERIVD 269
Query: 503 CIK---------------------QSHPTVQTIVYPN--KGGVWDSVHMKWLDTEDE--- 536
++ S P + ++YP+ +G ++DS W+ ++E
Sbjct: 270 IMEDELGREKLTNNGERASVGSSWSSRPWL--VLYPDGTQGEIYDSTLKTWVKKDEEEIT 327
Query: 537 -------YSILHYVPQWLEEGVN--IIGGCCEVTSYEIQQMRIMID 573
+ I++++ W N ++GGCC ++I+ +R ID
Sbjct: 328 ESWPERCWRIVNHI--WNRNAWNGILVGGCCRTRVHDIRALRDRID 371
>gi|393234786|gb|EJD42346.1| Homocysteine S-methyltransferase, partial [Auricularia delicata
TFB-10046 SS5]
Length = 411
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 32/192 (16%)
Query: 24 KDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALD 83
D DG LW++ + P+ VE HR F+ AGA II++S YQ + G+ Q+
Sbjct: 6 NDADGSALWAAACVQNAPDKVVEVHRRFLTAGARIIETSTYQVARATGVRAGFDGQQTEQ 65
Query: 84 LLHKSVQLMNSA---------------KDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
++ +V+L + A +D +P ++ + +E A S+GPYG
Sbjct: 66 IMCSAVKLADEARKAFYESGEALSTDPRDSRGASPSGAVSSA----SAQVEVALSLGPYG 121
Query: 129 TVLRDGSEYSGHYVDSM--------TEADLIAWHRPNVEALVR-----AGVDYLALETIP 175
L E+SG Y E L +WH + R A ++ LA ETIP
Sbjct: 122 ATLVPSCEFSGVYPPPFGPPAEEAAAEDALASWHLQRLRVYARHDDVWAKINILAFETIP 181
Query: 176 AEKEALALVKLL 187
+E A+ + +
Sbjct: 182 LLREIRAVRRAM 193
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 77/189 (40%), Gaps = 28/189 (14%)
Query: 282 KDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETAASIGPYGTVLR---DGSEYSG 335
D DG LW++ + P+ VE HR F+ IET+ T +R DG +
Sbjct: 6 NDADGSALWAAACVQNAPDKVVEVHRRFLTAGARIIETSTYQVARATGVRAGFDGQQTEQ 65
Query: 336 HYVDSMTEADLI--AWHRPNVEAL------VRAGVDYLALIKPSISSQTAASIGPYGTVL 387
++ AD A++ + EAL R A+ S + A S+GPYG L
Sbjct: 66 IMCSAVKLADEARKAFYE-SGEALSTDPRDSRGASPSGAVSSASAQVEVALSLGPYGATL 124
Query: 388 RDGSEYSGHYVDSM--------TEADLIAWHRPNVEALVR-----AGVDYLALETIPAEK 434
E+SG Y E L +WH + R A ++ LA ETIP +
Sbjct: 125 VPSCEFSGVYPPPFGPPAEEAAAEDALASWHLQRLRVYARHDDVWAKINILAFETIPLLR 184
Query: 435 EALALVKLL 443
E A+ + +
Sbjct: 185 EIRAVRRAM 193
>gi|408392959|gb|EKJ72235.1| hypothetical protein FPSE_07584 [Fusarium pseudograminearum CS3096]
Length = 341
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 151/352 (42%), Gaps = 59/352 (16%)
Query: 261 PNKGVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
P+K + +LDG TS S++++ PLWSS L + DF G +
Sbjct: 2 PSK-ILILDGGLGTSLESKYSVTFSRSTPLWSSHLLVADQPTLQSCQSDF--GAV----- 53
Query: 320 IGPYGTVLRDGSEYSGH-YVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--T 376
P +L + S H + D+ TE R NV + D + + + ++ +
Sbjct: 54 --PVDVLLTATYQVSLHGFADTRTEEFPEGISRENVPRFLD---DSVRIAERAVGDKGCV 108
Query: 377 AASIGPYGTVLRDGSEYSGHYV---DSMTEADLIAWHRPNVEAL-----VRAGVDYLALE 428
A SIGPYG + G EYSG Y DS+ DL +WHR + ++ + Y+ALE
Sbjct: 109 ALSIGPYGACMIPGQEYSGKYDEKHDSLQ--DLESWHRERLGVFSEVNDIQKRLGYVALE 166
Query: 429 TIPAEKEALALVKLLREFPGQKA---WLS-FSCKDDTHTSHGELISSAVTSCL--LANPD 482
TIP E +A+ K L P W + S + D G I SAV + L + +
Sbjct: 167 TIPRLDEIIAMRKALAATPALSKLPYWTALLSPEKDLRLPDGNSIESAVEAMLDPEVSAN 226
Query: 483 QIQAIGVNCVRPSHVSTLVRCIKQSHPTV----------QTIVYPN--KGGVWDSVHMKW 530
IG+NC + + +L++ + + + ++YP+ G V+++ KW
Sbjct: 227 IPWGIGINCTKVDKLDSLLQIFESTVSNMVEKGKITEWPALVLYPDGTNGEVYNTTTQKW 286
Query: 531 --LDTEDEYSILHYVPQWLEEGVN-----------IIGGCCEVTSYEIQQMR 569
D + + Q LE+ V ++GGCC S +I+++R
Sbjct: 287 EMPDGAENQRRSSWEGQ-LEDVVKATEGRGKWPAILVGGCCRAGSEDIKKLR 337
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 114/280 (40%), Gaps = 45/280 (16%)
Query: 6 KVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
K+ +LDG TS S++++ PLWSS L + DF D++ ++ Y
Sbjct: 4 KILILDGGLGTSLESKYSVTFSRSTPLWSSHLLVADQPTLQSCQSDFGAVPVDVLLTATY 63
Query: 65 QANVDNLTKL-------GYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH 117
Q ++ G S + L SV++ A +
Sbjct: 64 QVSLHGFADTRTEEFPEGISRENVPRFLDDSVRIAERAVGDKGCV--------------- 108
Query: 118 IETAASIGPYGTVLRDGSEYSGHYV---DSMTEADLIAWHRPNVEAL-----VRAGVDYL 169
A SIGPYG + G EYSG Y DS+ DL +WHR + ++ + Y+
Sbjct: 109 ---ALSIGPYGACMIPGQEYSGKYDEKHDSLQ--DLESWHRERLGVFSEVNDIQKRLGYV 163
Query: 170 ALETIPAEKEALALVKLLREFPGQKA---WLS-FSCKDDTHTSHGELISSAVTSCL--LA 223
ALETIP E +A+ K L P W + S + D G I SAV + L
Sbjct: 164 ALETIPRLDEIIAMRKALAATPALSKLPYWTALLSPEKDLRLPDGNSIESAVEAMLDPEV 223
Query: 224 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNK 263
+ + IG+NC + + +L++ + TV +V K
Sbjct: 224 SANIPWGIGINCTKVDKLDSLLQIFES---TVSNMVEKGK 260
>gi|385810397|ref|YP_005846793.1| methionine synthase I methyltransferase subunit [Ignavibacterium
album JCM 16511]
gi|383802445|gb|AFH49525.1| Methionine synthase I methyltransferase subunit [Ignavibacterium
album JCM 16511]
Length = 297
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 18/203 (8%)
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 437
S+GP G L G S ++S T +AL+ GVD + LET EA
Sbjct: 104 GSVGPTGKFLMTGDISSEELIESFT---------LQTKALLDGGVDAILLETFYDIDEAE 154
Query: 438 ALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPD-QIQAIGVNCVRPSH 496
+K +++FP SF+ ++ + ++ S L A + IGVNC S
Sbjct: 155 CAIKAVKDFPDVPLICSFTYDRNSSGEYRTMMGSTPKDVLQAMITLGVDVIGVNC--GSG 212
Query: 497 VSTLVRCIKQ----SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552
++++ +K+ SH + +V PN G+ +++ + +E +I++ V +L G+N
Sbjct: 213 YNSMIDLVKELRGFSH-NIPLLVQPN-AGLPETIESNIVYSETSEAIINSVKSFLSIGIN 270
Query: 553 IIGGCCEVTSYEIQQMRIMIDEF 575
IIGGCC T I+ +R +DEF
Sbjct: 271 IIGGCCGTTPEHIKIIRKTVDEF 293
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 113/265 (42%), Gaps = 41/265 (15%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K+ + DG++ +++ + ++ + LW+ T E ++ + +I AG+DII ++ +
Sbjct: 12 KILVSDGAWGTELFKLGLRSGECPELWNE----TNREVILKIAKSYISAGSDIISTNSFG 67
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
+ L+ +L +K+ +L A + + G S+G
Sbjct: 68 GSSIKLSHY--------NLDNKTYELNKIAAEISREA------------AGDKLVMGSVG 107
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
P G L G S ++S T +AL+ GVD + LET EA +K
Sbjct: 108 PTGKFLMTGDISSEELIESFT---------LQTKALLDGGVDAILLETFYDIDEAECAIK 158
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPD-QIQAIGVNCVRPSHVSTL 244
+++FP SF+ ++ + ++ S L A + IGVNC S +++
Sbjct: 159 AVKDFPDVPLICSFTYDRNSSGEYRTMMGSTPKDVLQAMITLGVDVIGVNC--GSGYNSM 216
Query: 245 VRCIKQ----SHPTVQTIVYPNKGV 265
+ +K+ SH + +V PN G+
Sbjct: 217 IDLVKELRGFSH-NIPLLVQPNAGL 240
>gi|387219573|gb|AFJ69495.1| homocysteine S-methyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 145
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 32/145 (22%)
Query: 409 WHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKA----------WLSFSCK 458
WHRP + L D LA ETIP + E +A+++LLRE Q+ W++ +C+
Sbjct: 3 WHRPRLAILGETDADLLAFETIPCQAEVVAILQLLREGREQEGSAPTSRRTPCWITLACQ 62
Query: 459 DDTHTSHGELISSAVTSCLLANPD-----QIQAIGVNCVRPSHVSTLVRCIKQSHPTVQT 513
D TH + GE + S V L+ D Q+ +GVNC P HV + +++ T+
Sbjct: 63 DATHLNSGESLVSCVQ--LVKALDTGSRPQVVGLGVNCCAPQHVEGALTVLREGLLTISA 120
Query: 514 ---------------IVYPNKGGVW 523
I YPN G VW
Sbjct: 121 AKEVISAAKGSERILIAYPNSGEVW 145
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 65/142 (45%), Gaps = 32/142 (22%)
Query: 153 WHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKA----------WLSFSCK 202
WHRP + L D LA ETIP + E +A+++LLRE Q+ W++ +C+
Sbjct: 3 WHRPRLAILGETDADLLAFETIPCQAEVVAILQLLREGREQEGSAPTSRRTPCWITLACQ 62
Query: 203 DDTHTSHGELISSAVTSCLLANPD-----QIQAIGVNCVRPSHVSTLVRCIKQSHPTVQT 257
D TH + GE + S V L+ D Q+ +GVNC P HV + +++ T+
Sbjct: 63 DATHLNSGESLVSCVQ--LVKALDTGSRPQVVGLGVNCCAPQHVEGALTVLREGLLTISA 120
Query: 258 ---------------IVYPNKG 264
I YPN G
Sbjct: 121 AKEVISAAKGSERILIAYPNSG 142
>gi|108862938|gb|ABA99259.2| Homocysteine S-methyltransferase 3, putative, expressed [Oryza
sativa Japonica Group]
Length = 156
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 16/133 (12%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG +++ + D PLWS+ L + P + H D++ AGA+II ++ YQA +
Sbjct: 31 VMDGGLATELEANGADLND--PLWSAKCLLSSPHLVRKVHLDYLEAGANIIITASYQATI 88
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKD---KENQTPDINLNKTFNLLTGH-IETAASI 124
G+S++++ DLL KSV++ A+D KE+ I H I AASI
Sbjct: 89 QGFESKGFSKEQSEDLLAKSVEIAREARDMFLKEHSDRPIQ----------HPILVAASI 138
Query: 125 GPYGTVLRDGSEY 137
G YG L DGSEY
Sbjct: 139 GSYGAYLADGSEY 151
>gi|391873422|gb|EIT82465.1| homocysteine S-methyltransferase [Aspergillus oryzae 3.042]
Length = 376
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 113/287 (39%), Gaps = 56/287 (19%)
Query: 1 MSKICKVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADI 58
M++ + LLDG + + H I PLWS+ L + P E H+ F GADI
Sbjct: 2 MTRQLPILLLDGGLGTTLGDPPHNITFTAETPLWSAHLLISSPSTLEEVHKAFATVGADI 61
Query: 59 IQSSCYQANVDN--LTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG 116
I ++ YQ + + LT Y+ +A + ++ L A +T
Sbjct: 62 ILTATYQTSFEGFTLTDPRYTADDAAHFMRSAIPLARRAGSSSGRT-------------- 107
Query: 117 HIETAASIGPYGTVLRD-GSEYSGHYVDSM-TEADLIAWHRPNVEALVRA-----GVDYL 169
++ A S+GPYG + G+EY+G Y + M +EA L WH + V +Y+
Sbjct: 108 -VKVALSLGPYGATMSPVGAEYTGLYPEEMNSEAKLREWHARRLCVFVDETGSWDNFEYI 166
Query: 170 ALETIPAEKEALALVKLLREF------------------PGQKAWLSFSCKDDTHTSHGE 211
A ET+ E A+ + + G+K W D +
Sbjct: 167 AFETVRRADEVKAIRGAMSDVLADMYQGQGPDSEKNQLAMGKKPWWICGVFPDEEVDEED 226
Query: 212 L---ISSAV------TSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 249
+ + +AV T L P IGVNC R +V +V ++
Sbjct: 227 VRAWVRAAVGTQEGETGVYLPRP---WGIGVNCTRIGNVGRIVSIMQ 270
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 139/379 (36%), Gaps = 86/379 (22%)
Query: 265 VKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDF--IRGHIETAASI 320
+ LLDG + + H I PLWS+ L + P E H+ F + I A+
Sbjct: 8 ILLLDGGLGTTLGDPPHNITFTAETPLWSAHLLISSPSTLEEVHKAFATVGADIILTAT- 66
Query: 321 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASI 380
Y T + Y T D + R + RAG +K A S+
Sbjct: 67 --YQTSFEGFTLTDPRY----TADDAAHFMRSAIPLARRAGSSSGRTVK------VALSL 114
Query: 381 GPYGTVLRD-GSEYSGHYVDSM-TEADLIAWHRPNVEALVRA-----GVDYLALETIPAE 433
GPYG + G+EY+G Y + M +EA L WH + V +Y+A ET+
Sbjct: 115 GPYGATMSPVGAEYTGLYPEEMNSEAKLREWHARRLCVFVDETGSWDNFEYIAFETVRRA 174
Query: 434 KEALALVKLLREF------------------PGQKAWLSFSCKDDTHTSHGEL---ISSA 472
E A+ + + G+K W D ++ + +A
Sbjct: 175 DEVKAIRGAMSDVLADMYQGQGPDSEKNQLAMGKKPWWICGVFPDEEVDEEDVRAWVRAA 234
Query: 473 V------TSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQ-------------- 512
V T L P IGVNC R +V +V ++ ++
Sbjct: 235 VGTQEGETGVYLPRP---WGIGVNCTRIGNVGRIVSIMQDELRNLEDLRTKGYVDEWNSV 291
Query: 513 -----TIVYPN--KGGVWDSVHMKWLDTEDE----------YSILHYVPQWLEEGVNIIG 555
++YP+ G +D V W+ TE + ++ +P+ EG+ ++G
Sbjct: 292 TGKPWLVLYPDGTNGEKYDPVTKTWVATETGKETRPWHEIYWDVVQGLPEGAWEGI-VMG 350
Query: 556 GCCEVTSYEIQQMRIMIDE 574
GCC +I +R IDE
Sbjct: 351 GCCRAGPEQIATLRRRIDE 369
>gi|238506367|ref|XP_002384385.1| homocysteine S-methyltransferase, putative [Aspergillus flavus
NRRL3357]
gi|220689098|gb|EED45449.1| homocysteine S-methyltransferase, putative [Aspergillus flavus
NRRL3357]
Length = 376
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 113/287 (39%), Gaps = 56/287 (19%)
Query: 1 MSKICKVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADI 58
M++ + LLDG + + H I PLWS+ L + P E H+ F GADI
Sbjct: 2 MTRQLPILLLDGGLGTTLGDPPHNITFTAETPLWSAHLLISSPSTLEEVHKAFATVGADI 61
Query: 59 IQSSCYQANVDN--LTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG 116
I ++ YQ + + LT Y+ +A + ++ L A +T
Sbjct: 62 ILTATYQTSFEGFTLTDPRYTADDAAHFMRSAIPLARRAGSSSGRT-------------- 107
Query: 117 HIETAASIGPYGTVLRD-GSEYSGHYVDSM-TEADLIAWHRPNVEALVRA-----GVDYL 169
++ A S+GPYG + G+EY+G Y + M +EA L WH + V +Y+
Sbjct: 108 -VKVALSLGPYGATMSPVGAEYTGLYPEEMNSEAKLREWHARRLCVFVDETGSWDNFEYI 166
Query: 170 ALETIPAEKEALALVKLLREF------------------PGQKAWLSFSCKDDTHTSHGE 211
A ET+ E A+ + + G+K W D +
Sbjct: 167 AFETVRRADEVKAIRGAMSDVLADMYQGQGPDSEKNQLAMGKKPWWICGVFPDEEVDEED 226
Query: 212 L---ISSAV------TSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 249
+ + +AV T L P IGVNC R +V +V ++
Sbjct: 227 VRAWVRAAVGTQEEETGVYLPRP---WGIGVNCTRIGNVGRIVSIMQ 270
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 139/379 (36%), Gaps = 86/379 (22%)
Query: 265 VKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDF--IRGHIETAASI 320
+ LLDG + + H I PLWS+ L + P E H+ F + I A+
Sbjct: 8 ILLLDGGLGTTLGDPPHNITFTAETPLWSAHLLISSPSTLEEVHKAFATVGADIILTAT- 66
Query: 321 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASI 380
Y T + Y T D + R + RAG +K A S+
Sbjct: 67 --YQTSFEGFTLTDPRY----TADDAAHFMRSAIPLARRAGSSSGRTVK------VALSL 114
Query: 381 GPYGTVLRD-GSEYSGHYVDSM-TEADLIAWHRPNVEALVRA-----GVDYLALETIPAE 433
GPYG + G+EY+G Y + M +EA L WH + V +Y+A ET+
Sbjct: 115 GPYGATMSPVGAEYTGLYPEEMNSEAKLREWHARRLCVFVDETGSWDNFEYIAFETVRRA 174
Query: 434 KEALALVKLLREF------------------PGQKAWLSFSCKDDTHTSHGEL---ISSA 472
E A+ + + G+K W D ++ + +A
Sbjct: 175 DEVKAIRGAMSDVLADMYQGQGPDSEKNQLAMGKKPWWICGVFPDEEVDEEDVRAWVRAA 234
Query: 473 V------TSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQT------------- 513
V T L P IGVNC R +V +V ++ ++
Sbjct: 235 VGTQEEETGVYLPRP---WGIGVNCTRIGNVGRIVSIMQDELRNLEDLRTKGYVDEWNSV 291
Query: 514 ------IVYPN--KGGVWDSVHMKWLDTEDE----------YSILHYVPQWLEEGVNIIG 555
++YP+ G +D V W+ TE + ++ +P+ EGV ++G
Sbjct: 292 TGKPWLVLYPDGTNGEKYDPVTKTWVATETGKETRPWHEIYWDVVQGLPEGAWEGV-VMG 350
Query: 556 GCCEVTSYEIQQMRIMIDE 574
GCC +I +R IDE
Sbjct: 351 GCCRAGPEQIATLRRRIDE 369
>gi|425773813|gb|EKV12139.1| Homocysteine S-methyltransferase, putative [Penicillium digitatum
Pd1]
gi|425776077|gb|EKV14312.1| Homocysteine S-methyltransferase, putative [Penicillium digitatum
PHI26]
Length = 341
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 111/264 (42%), Gaps = 41/264 (15%)
Query: 4 ICKVKLLDGSF-TSQVSRHTIK-DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQS 61
+ +++LDG TS + IK D PLW+S L ++PE RDF AG D++ +
Sbjct: 1 MATIQILDGGLGTSLGDLYNIKFDSRTTPLWASHLLVSDPETLQACQRDFGVAGVDVLLT 60
Query: 62 SCYQANVDNLTKL-------GYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLL 114
+ YQ + + ++ G L K+V + AK +E+ +
Sbjct: 61 ATYQVSAEGFSRTKTPQFPDGIPRSAVGPFLQKAVDIAEQAKVRESAS------------ 108
Query: 115 TGHIETAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAG------VD 167
A S+GPYG + G EYSG Y + +E L WH + A V
Sbjct: 109 -----VALSLGPYGACMIPGQEYSGAYDAEHDSEESLYLWHLDRLRMFADADGELVSRVR 163
Query: 168 YLALETIPAEKEALALVKLLREFPGQ-KAWLS--FSCKDDT---HTSHGELISSAVTSCL 221
Y+A ET+P E A+ + +R+ W++ F DD +S E++ +AV
Sbjct: 164 YVAFETLPRLDEVRAVRRAIRDSAFDVPFWIACVFPRDDDLLPDGSSVEEVVQAAVAP-- 221
Query: 222 LANPDQIQAIGVNCVRPSHVSTLV 245
+ IG NC + + LV
Sbjct: 222 MEGGAVPWGIGANCTKMHKLGGLV 245
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 136/342 (39%), Gaps = 49/342 (14%)
Query: 265 VKLLDGSF-TSQVSRHTIK-DVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
+++LDG TS + IK D PLW+S L ++PE RDF ++ +
Sbjct: 4 IQILDGGLGTSLGDLYNIKFDSRTTPLWASHLLVSDPETLQACQRDFGVAGVDVLLTATY 63
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
+ + + D + R V ++ VD K S+ A S+GP
Sbjct: 64 QVSAEGFSRTKTPQFPDGIP--------RSAVGPFLQKAVDIAEQAKVRESASVALSLGP 115
Query: 383 YGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAG------VDYLALETIPAEKE 435
YG + G EYSG Y + +E L WH + A V Y+A ET+P E
Sbjct: 116 YGACMIPGQEYSGAYDAEHDSEESLYLWHLDRLRMFADADGELVSRVRYVAFETLPRLDE 175
Query: 436 ALALVKLLREFPGQ-KAWLS--FSCKDDT---HTSHGELISSAVTSCLLANPDQIQAIGV 489
A+ + +R+ W++ F DD +S E++ +AV + IG
Sbjct: 176 VRAVRRAIRDSAFDVPFWIACVFPRDDDLLPDGSSVEEVVQAAVAP--MEGGAVPWGIGA 233
Query: 490 NCVRPSHVSTLVRCI----------KQSHPTVQTIVYPN--KGGVWDSVHMKWLDTEDEY 537
NC + + LV Q ++YP+ G V+++ W + D
Sbjct: 234 NCTKMHKLGGLVDLFGHAVAGGVAKGQIFAVPSLVLYPDGTNGEVYNTTTQIW-EKNDAL 292
Query: 538 SILHYVPQWLEEGVNI-----------IGGCCEVTSYEIQQM 568
S + L + VN+ +GGCC+ + ++I+++
Sbjct: 293 SDNRPWEEQLAQVVNVAYEKGYFDSFLVGGCCKASYHDIKKL 334
>gi|407916327|gb|EKG09701.1| Homocysteine S-methyltransferase [Macrophomina phaseolina MS6]
Length = 367
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 118/276 (42%), Gaps = 40/276 (14%)
Query: 4 ICKVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSS 62
+ +K+LDG TS ++ +K PLWSS +L + + + +DF+ AGAD++ ++
Sbjct: 1 MATIKVLDGGLGTSLEDKYGVKFNHSQPLWSSHFLISSHDTLLACQKDFVEAGADVLLTA 60
Query: 63 CYQANVDNLTKL-------GYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLT 115
YQ +V+ + G + L +V++ A
Sbjct: 61 TYQLSVEGFARTRTQDFPDGIPKGSITPYLAGAVEIAEKASAH----------------- 103
Query: 116 GHIETAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEAL-----VRAGVDYL 169
G + A S+GPYG + G EYSG Y + +E L WH + ++ V Y+
Sbjct: 104 GKAKVALSLGPYGASMIPGQEYSGKYDAEHDSEEGLYQWHLERLRLFLAVERLQDRVRYV 163
Query: 170 ALETIPAEKEALALVK------LLREFPGQKAWLSFSCKDDT-HTSHGELISSAVTSCL- 221
A ET+P E A+ + + + G + W+S +T G I V + +
Sbjct: 164 AFETLPRLDEVRAVRRAIRAAGVATDGAGPRFWISCVFPGETDDLPDGSTIDQVVEAMIG 223
Query: 222 -LANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQ 256
+++ + IG+NC + + L+R + + +Q
Sbjct: 224 YMSDGARPWGIGINCTKIHKLPRLIRKFEDAVRKIQ 259
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 122/294 (41%), Gaps = 36/294 (12%)
Query: 265 VKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
+K+LDG TS ++ +K PLWSS +L + + + +DF+ + +
Sbjct: 4 IKVLDGGLGTSLEDKYGVKFNHSQPLWSSHFLISSHDTLLACQKDFVEAGADVLLTATYQ 63
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPY 383
+V + + D + + + + VE +A A + A S+GPY
Sbjct: 64 LSVEGFARTRTQDFPDGIPKGSITPYLAGAVEIAEKASAHGKA--------KVALSLGPY 115
Query: 384 GTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEAL-----VRAGVDYLALETIPAEKEAL 437
G + G EYSG Y + +E L WH + ++ V Y+A ET+P E
Sbjct: 116 GASMIPGQEYSGKYDAEHDSEEGLYQWHLERLRLFLAVERLQDRVRYVAFETLPRLDEVR 175
Query: 438 ALVK------LLREFPGQKAWLSFSCKDDT-HTSHGELISSAVTSCL--LANPDQIQAIG 488
A+ + + + G + W+S +T G I V + + +++ + IG
Sbjct: 176 AVRRAIRAAGVATDGAGPRFWISCVFPGETDDLPDGSTIDQVVEAMIGYMSDGARPWGIG 235
Query: 489 VNCVRPSHVSTLVRCIKQSHPTVQT----------IVYPN--KGGVWDSVHMKW 530
+NC + + L+R + + +Q ++YP+ G V+++ +W
Sbjct: 236 INCTKIHKLPRLIRKFEDAVRKIQVAAPGQETPWLVLYPDGTNGEVYNTTTKQW 289
>gi|350295854|gb|EGZ76831.1| Homocysteine S-methyltransferase [Neurospora tetrasperma FGSC 2509]
Length = 361
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 123/294 (41%), Gaps = 44/294 (14%)
Query: 1 MSKICKVKLLDGSF-TSQVSRHTIKDVDGHPLWSS-VYLTTEPEACVETHRDFIRAGADI 58
M+ V +LDG T+ H I PLWSS + ++ E + + H F +AGA+I
Sbjct: 1 MATPIPVHILDGGMGTTLEDMHDITFSFETPLWSSHLLVSGEEDKLSDCHEAFKQAGANI 60
Query: 59 IQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHI 118
I ++ YQ +++ + LD+ + + DKE + P L++ L
Sbjct: 61 ISTATYQISINGFAATKSPKSGTLDVEREGI-------DKE-EIPRF-LSRAVVLAANAA 111
Query: 119 ET----AASIGPYGTVLRDGSEYSGHYVDSMTEAD-LIAWHRPNVEALVRAG---VDYLA 170
T A S+GPYG + +EYSG Y + L WH+ ++ V+Y+A
Sbjct: 112 GTEGKVALSLGPYGATMIPSTEYSGRYDPEHQDVQALEKWHKERLDLFKDVDPKQVNYIA 171
Query: 171 LETIPAEKEALALVKLLR------EFPGQKAWLSFSC-KDDTHTSHGELISSAVTSCL-- 221
ET+P E +A+ LL G+ W+S DD G + V + L
Sbjct: 172 FETVPRLDEIVAIRNLLSADHIPTSLRGRPVWISSPYPNDDGKLPDGSTVEEVVKAVLTH 231
Query: 222 ---LANPDQIQAIGVNCVRPSHVSTLVR--------CIKQSHPTV--QTIVYPN 262
L P IG+NC + + +LV+ CIK ++YP+
Sbjct: 232 REGLETP---WGIGINCTKVEKLDSLVKKYEDAIQTCIKNGEQMAWPSLVLYPD 282
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 105/259 (40%), Gaps = 44/259 (16%)
Query: 357 LVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEAD-LIAWHRPNVE 415
L RA V LA + A S+GPYG + +EYSG Y + L WH+ ++
Sbjct: 100 LSRAVV--LAANAAGTEGKVALSLGPYGATMIPSTEYSGRYDPEHQDVQALEKWHKERLD 157
Query: 416 ALVRAG---VDYLALETIPAEKEALALVKLLR------EFPGQKAWLSFSC-KDDTHTSH 465
V+Y+A ET+P E +A+ LL G+ W+S DD
Sbjct: 158 LFKDVDPKQVNYIAFETVPRLDEIVAIRNLLSADHIPTSLRGRPVWISSPYPNDDGKLPD 217
Query: 466 GELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTLVR--------CIKQSHPTV- 511
G + V + L L P IG+NC + + +LV+ CIK
Sbjct: 218 GSTVEEVVKAVLTHREGLETP---WGIGINCTKVEKLDSLVKKYEDAIQTCIKNGEQMAW 274
Query: 512 -QTIVYPN--KGGVWDSVHMKW--------LDTEDEYSILHYVPQWLEEGV---NIIGGC 557
++YP+ G V+++ W + E + + V + G ++GGC
Sbjct: 275 PSLVLYPDGTNGEVYNTATKTWELSPGHKQSEAPWETVLANVVEAARQRGTWKSIVVGGC 334
Query: 558 CEVTSYEIQQMRIMIDEFN 576
C+ + I+++R + ++
Sbjct: 335 CKASPEHIRRLRRTLQDYG 353
>gi|303319811|ref|XP_003069905.1| Homocysteine S-methyltransferase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240109591|gb|EER27760.1| Homocysteine S-methyltransferase family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 363
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 104/238 (43%), Gaps = 24/238 (10%)
Query: 30 PLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGY-------SEQEAL 82
PLWSS L + P E HR ++ AGADI+ ++ YQA+ + + ++
Sbjct: 19 PLWSSHLLLSHPTTLSEIHRSYVDAGADIVLTATYQASFEGFARTAIVPANVPADHKQDE 78
Query: 83 DLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG-TVLRDGSEYSGHY 141
H + + M++ + + P +FN + A S+GPYG T+ +EY+G Y
Sbjct: 79 RHGHATYRPMDATRYMRSAIP--LAYSSFNFSSKPPRVALSLGPYGATMCPVSAEYTGIY 136
Query: 142 VDSMTE-ADLIAWHRPNVEALVR-----AGVDYLALETIPAEKEALA-------LVKLLR 188
+ M+ A L AWH +E + +++L ET+ E LA L+++
Sbjct: 137 PEEMSNTAALEAWHAKRLEVYMEDPETWRKIEFLGFETVRRWDEVLAIRGAMGKLLQIAE 196
Query: 189 EFPGQKAWLS-FSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
+K W+S ++D +SA N IGVNC R ++ +V
Sbjct: 197 SGQSRKWWISGVFPQEDIDEEDVRRWTSAAFGSTSENGLHPWGIGVNCTRLENIERIV 254
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 139/349 (39%), Gaps = 73/349 (20%)
Query: 288 PLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLI 347
PLWSS L + P E HR + ++ A I T + + G ++ A++
Sbjct: 19 PLWSSHLLLSHPTTLSEIHRSY----VDAGADIVLTATYQ---ASFEGFARTAIVPANVP 71
Query: 348 AWH-----------RP-NVEALVRAGVD--YLALIKPSISSQTAASIGPYG-TVLRDGSE 392
A H RP + +R+ + Y + S + A S+GPYG T+ +E
Sbjct: 72 ADHKQDERHGHATYRPMDATRYMRSAIPLAYSSFNFSSKPPRVALSLGPYGATMCPVSAE 131
Query: 393 YSGHYVDSMTE-ADLIAWHRPNVEALVR-----AGVDYLALETIPAEKEALA-------L 439
Y+G Y + M+ A L AWH +E + +++L ET+ E LA L
Sbjct: 132 YTGIYPEEMSNTAALEAWHAKRLEVYMEDPETWRKIEFLGFETVRRWDEVLAIRGAMGKL 191
Query: 440 VKLLREFPGQKAWLS-FSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
+++ +K W+S ++D +SA N IGVNC R ++
Sbjct: 192 LQIAESGQSRKWWISGVFPQEDIDEEDVRRWTSAAFGSTSENGLHPWGIGVNCTRLENIE 251
Query: 499 TLVRCIK---------------------QSHPTVQTIVYPN--KGGVWDSVHMKWLDTED 535
+V ++ S P + ++YP+ +G ++D W+ +D
Sbjct: 252 RIVDIMEDELGREKLTDNGERASVGSSWSSRPWL--VLYPDGTQGEIYDPTLKTWVK-KD 308
Query: 536 EYSILHYVPQ---------WLEEGVN--IIGGCCEVTSYEIQQMRIMID 573
E I P+ W N ++GGCC ++I+ +R ID
Sbjct: 309 EEEITESWPERCWRIVNHTWNRNAWNGILVGGCCRTRVHDIRALRERID 357
>gi|358375623|dbj|GAA92203.1| homocysteine S-methyltransferase [Aspergillus kawachii IFO 4308]
Length = 354
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 147/356 (41%), Gaps = 64/356 (17%)
Query: 265 VKLLDGSFTSQVSRH--TIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
+ +LDG + + H D PLWSS + ++P+ + RDF T A++
Sbjct: 6 ILILDGGLGTSLQDHYNITFSSDTTPLWSSHLMISDPKTLLSCQRDFT-----TTAAVDV 60
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
T S + + I R ++ +R +D S+ A S+GP
Sbjct: 61 LLTATYQVSPEGFQRTKTPSHPSGIP--RASIAGYLRTALDVAEQAVQDTSASVALSLGP 118
Query: 383 YGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNV-----EAL----VRAGVDYLALETIPA 432
YG + G EYSG Y + E L WH + EA+ +R V Y+A+ET+P
Sbjct: 119 YGACMIPGQEYSGKYDGEHDDEEKLWRWHTDRLGLFDDEAMEGKGLRERVKYIAMETVPR 178
Query: 433 EKEALALVKLL---REF-PGQKAWLS--FSCKDDTHTSHGELISSAVTSCLL-----ANP 481
E A+ + + + F G W++ F +D G + V + LL A P
Sbjct: 179 IDEVRAVRRAVWSSKGFCEGVPFWVACVFPVEDKDTLPDGSTVDEVVEAMLLPIEGGATP 238
Query: 482 DQIQAIGVNCVRPSHVSTLV--------RCIK----QSHPTVQTIVYPN--KGGVWDSVH 527
IG+NC + + LV R ++ Q P + ++YP+ +G V+++
Sbjct: 239 ---WGIGINCTKLHKLPKLVGLFGDAVGRLLREGRIQERPAL--VLYPDGTQGEVYNTAT 293
Query: 528 MKWLDTEDEYSILHYVPQW---LEEGVN-----------IIGGCCEVTSYEIQQMR 569
W +D+ P W L + VN ++GGCC+ + +I+++R
Sbjct: 294 QTWEKVQDKSGTADSRP-WEVQLSQVVNDAAATGRFSSILVGGCCKASFNDIKRLR 348
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 113/278 (40%), Gaps = 67/278 (24%)
Query: 7 VKLLDGSFTSQVSRH--TIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGA-DIIQSSC 63
+ +LDG + + H D PLWSS + ++P+ + RDF A D++ ++
Sbjct: 6 ILILDGGLGTSLQDHYNITFSSDTTPLWSSHLMISDPKTLLSCQRDFTTTAAVDVLLTAT 65
Query: 64 YQANVDNLTKL---------------GYSEQEALDLLHKSVQLMNSAKDKENQTPDINLN 108
YQ + + + GY + ALD+ ++VQ +++
Sbjct: 66 YQVSPEGFQRTKTPSHPSGIPRASIAGYL-RTALDVAEQAVQDTSAS------------- 111
Query: 109 KTFNLLTGHIETAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNV-----EAL- 161
A S+GPYG + G EYSG Y + E L WH + EA+
Sbjct: 112 -----------VALSLGPYGACMIPGQEYSGKYDGEHDDEEKLWRWHTDRLGLFDDEAME 160
Query: 162 ---VRAGVDYLALETIPAEKEALALVKLL---REF-PGQKAWLS--FSCKDDTHTSHGEL 212
+R V Y+A+ET+P E A+ + + + F G W++ F +D G
Sbjct: 161 GKGLRERVKYIAMETVPRIDEVRAVRRAVWSSKGFCEGVPFWVACVFPVEDKDTLPDGST 220
Query: 213 ISSAVTSCLL-----ANPDQIQAIGVNCVRPSHVSTLV 245
+ V + LL A P IG+NC + + LV
Sbjct: 221 VDEVVEAMLLPIEGGATP---WGIGINCTKLHKLPKLV 255
>gi|320034205|gb|EFW16150.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 278
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 24/242 (9%)
Query: 30 PLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGY-------SEQEAL 82
PLWSS L + P E HR ++ AGADI+ ++ YQA+ + + ++
Sbjct: 19 PLWSSHLLLSHPTTLSEIHRSYVDAGADIVLTATYQASFEGFARTAIVPANVPADHKQDE 78
Query: 83 DLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG-TVLRDGSEYSGHY 141
H + + M++ + + P +FN + A S+GPYG T+ +EY+G Y
Sbjct: 79 RHGHATYRPMDATRYMRSAIP--LAYSSFNFSSKPPRVALSLGPYGATMCPVSAEYTGIY 136
Query: 142 VDSMTE-ADLIAWHRPNVEALVR-----AGVDYLALETIPAEKEALA-------LVKLLR 188
+ M+ A L AWH +E + +++L ET+ E LA L+++
Sbjct: 137 PEEMSNTAALEAWHAKRLEVYMEDPETWRKIEFLGFETVRRWDEVLAIRGAMGKLLQIAE 196
Query: 189 EFPGQKAWLS-FSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
+K W+S ++D +SA N IGVNC R ++ +V
Sbjct: 197 SGQSRKWWISGVFPQEDIDEEDVRRWTSAAFGSTSENGLHPWGIGVNCTRLENIERIVDI 256
Query: 248 IK 249
++
Sbjct: 257 ME 258
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 102/247 (41%), Gaps = 36/247 (14%)
Query: 288 PLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLI 347
PLWSS L + P E HR + ++ A I T + + G ++ A++
Sbjct: 19 PLWSSHLLLSHPTTLSEIHRSY----VDAGADIVLTATYQ---ASFEGFARTAIVPANVP 71
Query: 348 AWH-----------RP-NVEALVRAGVD--YLALIKPSISSQTAASIGPYG-TVLRDGSE 392
A H RP + +R+ + Y + S + A S+GPYG T+ +E
Sbjct: 72 ADHKQDERHGHATYRPMDATRYMRSAIPLAYSSFNFSSKPPRVALSLGPYGATMCPVSAE 131
Query: 393 YSGHYVDSMTE-ADLIAWHRPNVEALVR-----AGVDYLALETIPAEKEALA-------L 439
Y+G Y + M+ A L AWH +E + +++L ET+ E LA L
Sbjct: 132 YTGIYPEEMSNTAALEAWHAKRLEVYMEDPETWRKIEFLGFETVRRWDEVLAIRGAMGKL 191
Query: 440 VKLLREFPGQKAWLS-FSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
+++ +K W+S ++D +SA N IGVNC R ++
Sbjct: 192 LQIAESGQSRKWWISGVFPQEDIDEEDVRRWTSAAFGSTSENGLHPWGIGVNCTRLENIE 251
Query: 499 TLVRCIK 505
+V ++
Sbjct: 252 RIVDIME 258
>gi|388853048|emb|CCF53222.1| related to homocysteine S-methyltransferase [Ustilago hordei]
Length = 442
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 32/203 (15%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE---------ACVETHRDFIRAGA 56
++ +LDG + + D+ PLWS+ L + + + H +++AGA
Sbjct: 18 RIGILDGGLATYLEDGLNFDLSKGPLWSARLLDEKEDDVSDGKGQKGIFDAHLHYLQAGA 77
Query: 57 DIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG 116
II ++ YQA+ ++ + Y E A L+ K+V L A N N+N + +
Sbjct: 78 GIIGTATYQASQESFARANYDEASASHLISKAVDLACHALHTYN-----NVNSAAS--SS 130
Query: 117 HIETAASIGPYGTVLRDGSEYSGHYVDS-MTEAD-----------LIAWHRPNVEALVR- 163
+ S+GPYG +L +G+EY+G Y + + E+D + A+H+ +EA V
Sbjct: 131 RPVISLSLGPYGGMLSNGAEYTGDYRRTFLPESDPRREQQPSLEEMAAFHQRRIEAFVAQ 190
Query: 164 ---AGVDYLALETIPAEKEALAL 183
V LA+ET+P EALA
Sbjct: 191 PSWKDVGVLAVETVPRADEALAF 213
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 26/198 (13%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVET--HRDFIRGHIE-TAASIG 321
+ +LDG + + D+ PLWS+ L + + + + H+ A G
Sbjct: 19 IGILDGGLATYLEDGLNFDLSKGPLWSARLLDEKEDDVSDGKGQKGIFDAHLHYLQAGAG 78
Query: 322 PYGTVLRDGSE--YSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--TA 377
GT S+ ++ D + + LI+ V+ A Y + + SS+ +
Sbjct: 79 IIGTATYQASQESFARANYDEASASHLIS---KAVDLACHALHTYNNVNSAASSSRPVIS 135
Query: 378 ASIGPYGTVLRDGSEYSGHYVDS-MTEAD-----------LIAWHRPNVEALVR----AG 421
S+GPYG +L +G+EY+G Y + + E+D + A+H+ +EA V
Sbjct: 136 LSLGPYGGMLSNGAEYTGDYRRTFLPESDPRREQQPSLEEMAAFHQRRIEAFVAQPSWKD 195
Query: 422 VDYLALETIPAEKEALAL 439
V LA+ET+P EALA
Sbjct: 196 VGVLAVETVPRADEALAF 213
>gi|407843935|gb|EKG01706.1| cytidine triphosphate synthase, putative [Trypanosoma cruzi]
Length = 410
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 133/335 (39%), Gaps = 72/335 (21%)
Query: 3 KICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSS 62
++ V + DG+ + + + +WSS L +E + HR +I AG D++ +
Sbjct: 5 QVTGVLIKDGAMGTLLESWDVDYAKAGSMWSSSVLLSEMDLVKRAHRAYIDAGCDVLLTC 64
Query: 63 CYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIET-- 120
YQ + + S+ +L+ ++VQ K+ Q + TG I+
Sbjct: 65 TYQMHEEGCAA---SKMTMCELVDRAVQAARHTMPKQKQKGLTEESTAKERRTGGIDVFR 121
Query: 121 -----------------AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA-LV 162
A S+GPYG+ L G EY G Y S+ EA + A+H +EA L
Sbjct: 122 YALSSIKDNGQERVVLLAGSLGPYGSSLPGGQEYLGEY--SIHEAVINAFHARRLEAFLC 179
Query: 163 RAG------VDYLALETIPAEKEALALV------KLLREFPGQKAWLSFSCKD------- 203
G VD+L LET P EAL ++ ++LR P ++++ K+
Sbjct: 180 NVGEKHGLKVDFLLLETFPLLDEALGILSFVNQHEILRTAPFCFSFIAAPVKNPLPENAD 239
Query: 204 ------------------DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
D +T G L S +C A + +G NC P VS +
Sbjct: 240 DDALDNWWNAAASSIRLPDGNTFEGAL-SELRGNCGTA----LVGMGCNCSGPLEVSLVA 294
Query: 246 RCI-----KQSHPTVQTIVYPNKGVKLLDGSFTSQ 275
+ + + + ++YPN G K DG + Q
Sbjct: 295 TALLHKKRQDTEGPLVLLLYPNSGEKFTDGQWKKQ 329
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 81/209 (38%), Gaps = 31/209 (14%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIET------- 316
GV + DG+ + + + +WSS L +E + HR +I +
Sbjct: 8 GVLIKDGAMGTLLESWDVDYAKAGSMWSSSVLLSEMDLVKRAHRAYIDAGCDVLLTCTYQ 67
Query: 317 ------AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKP 370
AAS ++ + + H + + L + G+D
Sbjct: 68 MHEEGCAASKMTMCELVDRAVQAARHTMPKQKQKGLT--EESTAKERRTGGIDVFRYALS 125
Query: 371 SISSQ-------TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA-LVRAG- 421
SI A S+GPYG+ L G EY G Y S+ EA + A+H +EA L G
Sbjct: 126 SIKDNGQERVVLLAGSLGPYGSSLPGGQEYLGEY--SIHEAVINAFHARRLEAFLCNVGE 183
Query: 422 -----VDYLALETIPAEKEALALVKLLRE 445
VD+L LET P EAL ++ + +
Sbjct: 184 KHGLKVDFLLLETFPLLDEALGILSFVNQ 212
>gi|444316058|ref|XP_004178686.1| hypothetical protein TBLA_0B03260 [Tetrapisispora blattae CBS 6284]
gi|387511726|emb|CCH59167.1| hypothetical protein TBLA_0B03260 [Tetrapisispora blattae CBS 6284]
Length = 326
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 9/197 (4%)
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL-ALETIPAEKEA 436
SIGPY + + +EY+G Y D + + +P ++ L A+ET+P + E
Sbjct: 124 GSIGPYASHV--SAEYTGDYGLHPENVDYLNYFKPQLDNFNDNDDIDLIAMETVPNKYEL 181
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIGVNCVR 493
AL+ + ++S S DD + G + IS+ + + NP+ + +GVNCV
Sbjct: 182 KALLSWDGTTIKKPFYISLSVGDDGNLRDGTSMDTISTMFQNREVKNPN-LMMVGVNCVS 240
Query: 494 PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY--SILHYVPQWLEEGV 551
+++ ++ + P + + YPN G V+D + W D S V + GV
Sbjct: 241 YDKTLMIIKKLQIAVPDLPLVCYPNSGEVYDQITQSWKTNNDIKLDSWETLVKDLVANGV 300
Query: 552 NIIGGCCEVTSYEIQQM 568
++GGCC T +I ++
Sbjct: 301 RMVGGCCRTTPDDIHKI 317
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL-ALETIPAEKEA 180
SIGPY + + +EY+G Y D + + +P ++ L A+ET+P + E
Sbjct: 124 GSIGPYASHV--SAEYTGDYGLHPENVDYLNYFKPQLDNFNDNDDIDLIAMETVPNKYEL 181
Query: 181 LALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIGVNCVR 237
AL+ + ++S S DD + G + IS+ + + NP+ + +GVNCV
Sbjct: 182 KALLSWDGTTIKKPFYISLSVGDDGNLRDGTSMDTISTMFQNREVKNPN-LMMVGVNCVS 240
Query: 238 PSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+++ ++ + P + + YPN G
Sbjct: 241 YDKTLMIIKKLQIAVPDLPLVCYPNSG 267
>gi|401841639|gb|EJT43998.1| SAM4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 325
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 136/322 (42%), Gaps = 21/322 (6%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVET--HRDFIRGHIETAASI 320
K V +LDG +++ IK +P+WS++ ++ E+ +R ++G +
Sbjct: 15 KKVLVLDGGQGTELENRGIKV--ANPVWSTIPFISDSFWSDESSANRKIVKGMFNDFLNA 72
Query: 321 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASI 380
G ++ + S V T ++ + + +V D + K I I
Sbjct: 73 GAE-ILMTTTYQTSYKSVSENTPIKTLSEYNNLLTRIVDFSRDCIGENKYLI-----GCI 126
Query: 381 GPYGT-VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEALA 438
GP+G + R E++G Y D + +P ++ + +D + ETIP E A
Sbjct: 127 GPWGAHICR---EFTGDYGPDPESIDFYEYFKPQLDNFNKNDKLDLIGFETIPNVHELRA 183
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQA----IGVNCVRP 494
++ + ++ S + G + V + D+I +G+NCV
Sbjct: 184 ILSWDESILSKPFYIGLSVHEHGVLRDGTTMEE-VAKVIKGLGDKINPNFSLLGINCVSF 242
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNI 553
+ ++ + Q+ P + + YPN G V+D+ WL D+ S V Q+++ G I
Sbjct: 243 NQSPDILESLHQALPDMALLAYPNSGEVYDTEKKIWLPNSDKLNSWDTVVKQYIDSGARI 302
Query: 554 IGGCCEVTSYEIQQMRIMIDEF 575
IGGCC + +IQ++ + ++
Sbjct: 303 IGGCCRTSPNDIQEISTAVKKY 324
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 110/275 (40%), Gaps = 38/275 (13%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVET----------HRDFIRAG 55
KV +LDG +++ IK +P+WS++ ++ E+ DF+ AG
Sbjct: 16 KVLVLDGGQGTELENRGIKV--ANPVWSTIPFISDSFWSDESSANRKIVKGMFNDFLNAG 73
Query: 56 ADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLT 115
A+I+ ++ YQ + ++ SE + L + L+ D I NK
Sbjct: 74 AEILMTTTYQTSYKSV-----SENTPIKTLSEYNNLLTRIVDFSRDC--IGENKYL---- 122
Query: 116 GHIETAASIGPYGT-VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALET 173
IGP+G + R E++G Y D + +P ++ + +D + ET
Sbjct: 123 -----IGCIGPWGAHICR---EFTGDYGPDPESIDFYEYFKPQLDNFNKNDKLDLIGFET 174
Query: 174 IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQA--- 230
IP E A++ + ++ S + G + V + D+I
Sbjct: 175 IPNVHELRAILSWDESILSKPFYIGLSVHEHGVLRDGTTMEE-VAKVIKGLGDKINPNFS 233
Query: 231 -IGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+G+NCV + ++ + Q+ P + + YPN G
Sbjct: 234 LLGINCVSFNQSPDILESLHQALPDMALLAYPNSG 268
>gi|346977953|gb|EGY21405.1| homocysteine S-methyltransferase [Verticillium dahliae VdLs.17]
Length = 355
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 144/349 (41%), Gaps = 51/349 (14%)
Query: 261 PNKGVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
P+ V +LDG TS ++ ++ PLWSS L ++ + + +DF ++ +
Sbjct: 5 PSNEVLILDGGLGTSLGDKYGVRFDKSTPLWSSHMLVSDQDTLLACQKDFGDVPVDIILT 64
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAAS 379
++ + + H+ D + + ++ R + AG + Q A S
Sbjct: 65 ATYQFSIHGFANTRTAHFPDGIDRTKIASYARDAIAIAHSAG--------KANGGQVALS 116
Query: 380 IGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAG-----VDYLALETIPAE 433
+GPYG + G EY+G Y + T DL AWH AG V Y+A+ET+P
Sbjct: 117 VGPYGACMIPGQEYTGKYDPEHDTPEDLAAWHLERFRIFEEAGGFSSPVSYVAVETMPRL 176
Query: 434 KEALALVKLLREFPGQKAWLSF--SC---KDDTHTSHGELISSAVTSCLLANP----DQI 484
E +A K L + + A F +C ++ G ISSAV + L NP Q
Sbjct: 177 DEIVAARKALDDLGAKAANTPFWIACVFPGEEMALPDGASISSAVDAML--NPAVARSQP 234
Query: 485 QAIGVNCVRPSHVSTLVRCIKQS----------HPTVQTIVYPN--KGGVWDSVHMKW-L 531
IG+NC + + L+ + + + ++YP+ G V+++ W L
Sbjct: 235 WGIGINCTKVWKLKELIARFEAAVADQVQAGHVNEAPALVLYPDGTDGEVYNTTTQTWEL 294
Query: 532 DTEDEYSILHYVPQWLEEGVN-----------IIGGCCEVTSYEIQQMR 569
+ + Q L E V ++GGCC+ + + ++R
Sbjct: 295 PAGGKVQGAPWEEQ-LAEIVRDANTRGKWKQIVVGGCCKASHAHLARLR 342
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 114/257 (44%), Gaps = 30/257 (11%)
Query: 6 KVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
+V +LDG TS ++ ++ PLWSS L ++ + + +DF DII ++ Y
Sbjct: 8 EVLILDGGLGTSLGDKYGVRFDKSTPLWSSHMLVSDQDTLLACQKDFGDVPVDIILTATY 67
Query: 65 QANVDNLTKLGYSE-QEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
Q ++ + + +D ++ + A+D I + + G + A S
Sbjct: 68 QFSIHGFANTRTAHFPDGID----RTKIASYARDA------IAIAHSAGKANGG-QVALS 116
Query: 124 IGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAG-----VDYLALETIPAE 177
+GPYG + G EY+G Y + T DL AWH AG V Y+A+ET+P
Sbjct: 117 VGPYGACMIPGQEYTGKYDPEHDTPEDLAAWHLERFRIFEEAGGFSSPVSYVAVETMPRL 176
Query: 178 KEALALVKLLREFPGQKAWLSF--SC---KDDTHTSHGELISSAVTSCLLANP----DQI 228
E +A K L + + A F +C ++ G ISSAV + L NP Q
Sbjct: 177 DEIVAARKALDDLGAKAANTPFWIACVFPGEEMALPDGASISSAVDAML--NPAVARSQP 234
Query: 229 QAIGVNCVRPSHVSTLV 245
IG+NC + + L+
Sbjct: 235 WGIGINCTKVWKLKELI 251
>gi|429861672|gb|ELA36347.1| homocysteine s-methyltransferase [Colletotrichum gloeosporioides
Nara gc5]
Length = 355
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 147/352 (41%), Gaps = 54/352 (15%)
Query: 265 VKLLDGSF-TSQVSRHTIK-DVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
V +LDG TS ++ +K + PLWS+ L + + +DF GH+ P
Sbjct: 11 VLILDGGLGTSLEDKYGLKFNSATTPLWSTHLLVDGQDTLLACQKDF--GHV-------P 61
Query: 323 YGTVLRDGSEYSGH-YVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
+L + S H + ++ T R + ++ V + ++TA SIG
Sbjct: 62 VDIILTATYQLSIHGFANTRTPEHPNGIDRATIGNFIKDAVRIAHDAGRANGAKTALSIG 121
Query: 382 PYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAG-----VDYLALETIP---- 431
PYG + G EYSG Y D + L WH ++ AG V Y+A+ETIP
Sbjct: 122 PYGACMIPGQEYSGAYDEDHDSLEKLRDWHFERLQLFNNAGAFASPVSYVAIETIPRADE 181
Query: 432 --AEKEALALVKLLREFPGQKAWL-SFSCKDDTHTSHGELISSAVTSCLLANPD----QI 484
A ++AL +L W+ S DD G I AV + L +P+ +
Sbjct: 182 IKAIRQALDKTGVLATGSALPFWIASLFPGDDERLPDGSSIKEAVAAML--SPEIAACRP 239
Query: 485 QAIGVNCVRPSHVSTLVRCIKQSHPTVQT----------IVYPN--KGGVWDSVHMKW-- 530
IG+NC + + +LV+ + + + T I+YP+ G V+++ KW
Sbjct: 240 WGIGINCTKVWKLESLVKSYESAVQELITDGIVAEAPALILYPDGTNGEVYNTTTQKWEL 299
Query: 531 ------LDTEDEYSILHYVPQWLEEGV---NIIGGCCEVTSYEIQQMRIMID 573
T E + V G+ ++GGCC+ + +I ++R ++
Sbjct: 300 PEGSNHPKTSWEAQLTEVVANAQSRGIWKQIVVGGCCKASHADIARLRATVE 351
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 108/261 (41%), Gaps = 33/261 (12%)
Query: 6 KVKLLDGSF-TSQVSRHTIK-DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+V +LDG TS ++ +K + PLWS+ L + + +DF DII ++
Sbjct: 10 RVLILDGGLGTSLEDKYGLKFNSATTPLWSTHLLVDGQDTLLACQKDFGHVPVDIILTAT 69
Query: 64 YQANVDNLTKLGYSEQ-EALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAA 122
YQ ++ E +D + N KD D +TA
Sbjct: 70 YQLSIHGFANTRTPEHPNGID----RATIGNFIKDAVRIAHDAGR-------ANGAKTAL 118
Query: 123 SIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAG-----VDYLALETIP- 175
SIGPYG + G EYSG Y D + L WH ++ AG V Y+A+ETIP
Sbjct: 119 SIGPYGACMIPGQEYSGAYDEDHDSLEKLRDWHFERLQLFNNAGAFASPVSYVAIETIPR 178
Query: 176 -----AEKEALALVKLLREFPGQKAWL-SFSCKDDTHTSHGELISSAVTSCLLANPD--- 226
A ++AL +L W+ S DD G I AV + L +P+
Sbjct: 179 ADEIKAIRQALDKTGVLATGSALPFWIASLFPGDDERLPDGSSIKEAVAAML--SPEIAA 236
Query: 227 -QIQAIGVNCVRPSHVSTLVR 246
+ IG+NC + + +LV+
Sbjct: 237 CRPWGIGINCTKVWKLESLVK 257
>gi|342179836|emb|CCC89310.1| putative homocysteine S-methyltransferase [Trypanosoma congolense
IL3000]
Length = 432
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 124/327 (37%), Gaps = 66/327 (20%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + P+WS+ + TEP A H ++ AGADI+ +S YQ N
Sbjct: 27 VLDGAMGTEIEERRPDLLPLGPMWSASVVHTEPSAVQSVHEAYVNAGADILLTSTYQINT 86
Query: 69 DNLTKLGYSEQEALD----LLHKSV-----QLMNSAKDKENQTPDIN---LNKTFNLLTG 116
LG + + +D LL S+ AK K P + + F L
Sbjct: 87 KGCATLGVAIPDLVDAAVRLLRNSITPERTSATEQAKAKAKLDPSVKRRGASAVFAPLLY 146
Query: 117 HIE---------TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV----- 162
I S+ PYG++ G EY G Y ++ E + ++ V A +
Sbjct: 147 GIRDDPSKCPVLIGGSMSPYGSLAGYGQEYHGKY--TVDETIIDEFYNQRVRAFIDYTSD 204
Query: 163 --RAGVDYLALETIPAEKEALALVKLLR----------------------EFPGQKA--- 195
R VD+L LET P KEA+ + L + P A
Sbjct: 205 TPRPKVDFLMLETFPLLKEAVGVFSWLSHQRDGVLDTAPVCISFVSVLDGDRPSADADDA 264
Query: 196 ----WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ- 250
W + S + H G + + + Q+ +G NC P VS + + +
Sbjct: 265 AVEEWWN-SAESSIHLPDGNTYLQVLDTLMELRSPQLAGLGANCCSPLEVSVVASLLLKK 323
Query: 251 -----SHPTVQTIVYPNKGVKLLDGSF 272
P++ ++Y N G + +G +
Sbjct: 324 KKKHVEDPSLVLLLYSNSGEEFTEGEW 350
>gi|119499249|ref|XP_001266382.1| homocysteine S-methyltransferase, putative [Neosartorya fischeri
NRRL 181]
gi|119414546|gb|EAW24485.1| homocysteine S-methyltransferase, putative [Neosartorya fischeri
NRRL 181]
Length = 343
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 115/269 (42%), Gaps = 49/269 (18%)
Query: 4 ICKVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSS 62
+ +++LDG TS +H + PLW+S L ++P + RDFI AG+DI+ ++
Sbjct: 1 MASIQILDGGLGTSLQDQHGVTFDSSTPLWASHLLVSDPTTLLACQRDFITAGSDILLTA 60
Query: 63 CYQANVDNLTKLG---YSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIE 119
YQ +++ + + + + K ++ + ++ P +
Sbjct: 61 TYQVSIEGFARTKTPEFPDGIPRPAIGKYLRTALAVAEQARVCPSAA------------K 108
Query: 120 TAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAG------VDYLALE 172
A S+GPYG + G EYSG Y + +E L WH + + A V Y+A E
Sbjct: 109 IALSLGPYGACMIPGQEYSGKYDAEHDSEETLFQWHLERLRLFLEADEKLAERVQYVAFE 168
Query: 173 TIPAEKEALALVKLLRE------------FPGQKAWLSFSCKDDTHTSHGELISSAVTSC 220
T+P E A+ + +R FPG+ A L +S G+++ +A
Sbjct: 169 TLPRLDEIRAVRRAIRAAGLDVPFWVACVFPGEGATLP------DGSSIGQIVQAA---- 218
Query: 221 LLANPDQIQ---AIGVNCVRPSHVSTLVR 246
LA D +G+NC + + LVR
Sbjct: 219 -LAEMDGAAVPWGLGINCTKIYKLDGLVR 246
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 141/353 (39%), Gaps = 69/353 (19%)
Query: 265 VKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
+++LDG TS +H + PLW+S L ++P + RDFI + +
Sbjct: 4 IQILDGGLGTSLQDQHGVTFDSSTPLWASHLLVSDPTTLLACQRDFITAGSDILLTATYQ 63
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG--VDYLALIKPSISSQTAASIG 381
++ + + D + RP + +R V A + PS +++ A S+G
Sbjct: 64 VSIEGFARTKTPEFPDGIP--------RPAIGKYLRTALAVAEQARVCPS-AAKIALSLG 114
Query: 382 PYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAG------VDYLALETIPAEK 434
PYG + G EYSG Y + +E L WH + + A V Y+A ET+P
Sbjct: 115 PYGACMIPGQEYSGKYDAEHDSEETLFQWHLERLRLFLEADEKLAERVQYVAFETLPRLD 174
Query: 435 EALALVKLLRE------------FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPD 482
E A+ + +R FPG+ A L +S G+++ +A LA D
Sbjct: 175 EIRAVRRAIRAAGLDVPFWVACVFPGEGATLP------DGSSIGQIVQAA-----LAEMD 223
Query: 483 QIQ---AIGVNCVRPSHVSTLVRCI----------KQSHPTVQTIVYPN--KGGVWDSVH 527
+G+NC + + LVR Q ++YP+ G V+++
Sbjct: 224 GAAVPWGLGINCTKIYKLDGLVREFGEEVASAVGKGQVGAVPSLVLYPDGTNGEVYNTTT 283
Query: 528 MKWLDTED---------EYSILHYVPQWLEEG---VNIIGGCCEVTSYEIQQM 568
W E E + H V G ++GGCC+ + +I+++
Sbjct: 284 QTWEKRERYTSDERGPWEAQLAHVVTNARATGPFTSFLVGGCCKASHNDIRKL 336
>gi|169785373|ref|XP_001827147.1| homocysteine S-methyltransferase [Aspergillus oryzae RIB40]
gi|83775895|dbj|BAE66014.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 376
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 112/286 (39%), Gaps = 56/286 (19%)
Query: 2 SKICKVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADII 59
++ + LLDG + + H I PLWS+ L + P E H+ F GADII
Sbjct: 3 TRQLPILLLDGGLGTTLGDPPHNITFTAETPLWSAHLLISSPSTLEEVHKAFATVGADII 62
Query: 60 QSSCYQANVDN--LTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH 117
++ YQ + + LT Y+ +A + ++ L A +T
Sbjct: 63 LTATYQTSFEGFTLTDPRYTADDAAHFMRSAIPLARRAGSSSGRT--------------- 107
Query: 118 IETAASIGPYGTVLRD-GSEYSGHYVDSM-TEADLIAWHRPNVEALVRA-----GVDYLA 170
++ A S+GPYG + G+EY+G Y + M +EA L WH + V +Y+A
Sbjct: 108 VKVALSLGPYGATMSPVGAEYTGLYPEEMNSEAKLREWHARRLCVFVDETGSWDNFEYIA 167
Query: 171 LETIPAEKEALALVKLLREF------------------PGQKAWLSFSCKDDTHTSHGEL 212
ET+ E A+ + + G+K W D ++
Sbjct: 168 FETVRRADEVKAIRGAMSDVLADMYQGQGPDSEKNQLAMGKKPWWICGVFPDEEVDEEDV 227
Query: 213 ---ISSAV------TSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 249
+ +AV T L P IGVNC R +V +V ++
Sbjct: 228 RAWVRAAVGTQEGETGVYLPRP---WGIGVNCTRIGNVGRIVSIMQ 270
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 139/379 (36%), Gaps = 86/379 (22%)
Query: 265 VKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDF--IRGHIETAASI 320
+ LLDG + + H I PLWS+ L + P E H+ F + I A+
Sbjct: 8 ILLLDGGLGTTLGDPPHNITFTAETPLWSAHLLISSPSTLEEVHKAFATVGADIILTAT- 66
Query: 321 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASI 380
Y T + Y T D + R + RAG +K A S+
Sbjct: 67 --YQTSFEGFTLTDPRY----TADDAAHFMRSAIPLARRAGSSSGRTVK------VALSL 114
Query: 381 GPYGTVLRD-GSEYSGHYVDSM-TEADLIAWHRPNVEALVRA-----GVDYLALETIPAE 433
GPYG + G+EY+G Y + M +EA L WH + V +Y+A ET+
Sbjct: 115 GPYGATMSPVGAEYTGLYPEEMNSEAKLREWHARRLCVFVDETGSWDNFEYIAFETVRRA 174
Query: 434 KEALALVKLLREF------------------PGQKAWLSFSCKDDTHTSHGEL---ISSA 472
E A+ + + G+K W D ++ + +A
Sbjct: 175 DEVKAIRGAMSDVLADMYQGQGPDSEKNQLAMGKKPWWICGVFPDEEVDEEDVRAWVRAA 234
Query: 473 V------TSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQT------------- 513
V T L P IGVNC R +V +V ++ ++
Sbjct: 235 VGTQEGETGVYLPRP---WGIGVNCTRIGNVGRIVSIMQDELRNLEDLRTKGYVDEWNSV 291
Query: 514 ------IVYPN--KGGVWDSVHMKWLDTEDE----------YSILHYVPQWLEEGVNIIG 555
++YP+ G +D V W+ TE + ++ +P+ EG+ ++G
Sbjct: 292 TGKPWLVLYPDGTNGEKYDPVTKTWVATETGKETRPWHEIYWDVVQGLPEGAWEGI-VMG 350
Query: 556 GCCEVTSYEIQQMRIMIDE 574
GCC +I +R IDE
Sbjct: 351 GCCRAGPEQIATLRRRIDE 369
>gi|228912429|ref|ZP_04076112.1| Homocysteine S-methyltransferase [Bacillus thuringiensis IBL 200]
gi|228847210|gb|EEM92181.1| Homocysteine S-methyltransferase [Bacillus thuringiensis IBL 200]
Length = 140
Score = 71.6 bits (174), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 443 LREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
+REFP AWLSFS K++ S G +L+ A + +QI AIG+NC + V+ +
Sbjct: 1 MREFPETYAWLSFSLKNEKEISEGMKLVECAR---VFEKSEQIVAIGINC---APVTVVT 54
Query: 502 RCIKQSHPTVQT--IVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
I++ ++ IVYPN G ++ W E ++ +W + G +IGGCC
Sbjct: 55 GAIQELRANIKKPIIVYPNSGETYNPETKTWHGHEQCNTLDIQSEEWYQAGARLIGGCCR 114
Query: 560 VTSYEIQQM 568
T Y I+++
Sbjct: 115 TTPYHIEEI 123
Score = 47.4 bits (111), Expect = 0.023, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 9/81 (11%)
Query: 187 LREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
+REFP AWLSFS K++ S G +L+ A + +QI AIG+NC + V+ +
Sbjct: 1 MREFPETYAWLSFSLKNEKEISEGMKLVECAR---VFEKSEQIVAIGINC---APVTVVT 54
Query: 246 RCIKQSHPTVQT--IVYPNKG 264
I++ ++ IVYPN G
Sbjct: 55 GAIQELRANIKKPIIVYPNSG 75
>gi|392297559|gb|EIW08658.1| Mht1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 324
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 142/341 (41%), Gaps = 40/341 (11%)
Query: 253 PTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP---------EACV 303
P + IV V +LDG +++ I P+WS+ T+E +
Sbjct: 5 PIKELIVEHPGKVLILDGGQGTELENRGINI--NSPVWSAAPFTSESFWEPSSQERKVVE 62
Query: 304 ETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHY--VDSMTEADLIAWHRPNVEALVRAG 361
E +RDF+ +I Y ++ + T +A ++ ++ +V
Sbjct: 63 EMYRDFMIAGANILMTI-----------TYQANFQSISENTSIKTLAAYKRFLDKIVSFT 111
Query: 362 VDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-A 420
+++ + I SIGP+ + EY+G Y D + +P +E +
Sbjct: 112 REFIGEKRYLI-----GSIGPWAAHV--SCEYTGDYGPHPENIDYYGFFKPQLENFNQNR 164
Query: 421 GVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCL 477
+D + ETIP E A++ + + ++ S D++ G E IS +
Sbjct: 165 DIDLIGFETIPNFHELKAILSWDEDIISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLG 224
Query: 478 LANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW---LDTE 534
+ +GVNCV + + +++ + + P + +VYPN G +++ W +
Sbjct: 225 NKINKNLLLMGVNCVSFNQSALILKMLHEHLPGMPLLVYPNSGEIYNPKEKTWHRPTNKL 284
Query: 535 DEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEF 575
D++ + V ++++ G IIGGCC + +I ++ +D++
Sbjct: 285 DDWETM--VKKFVDNGARIIGGCCRTSPKDIAEIASAVDKY 323
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 115/272 (42%), Gaps = 33/272 (12%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP---------EACVETHRDFIRAGA 56
KV +LDG +++ I P+WS+ T+E + E +RDF+ AGA
Sbjct: 16 KVLILDGGQGTELENRGINI--NSPVWSAAPFTSESFWEPSSQERKVVEEMYRDFMIAGA 73
Query: 57 DIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG 116
+I+ + YQAN ++ SE ++ L + ++ ++ + F +
Sbjct: 74 NILMTITYQANFQSI-----SENTSIKTLAAYKRFLDKI---------VSFTREF--IGE 117
Query: 117 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-AGVDYLALETIP 175
SIGP+ + EY+G Y D + +P +E + +D + ETIP
Sbjct: 118 KRYLIGSIGPWAAHV--SCEYTGDYGPHPENIDYYGFFKPQLENFNQNRDIDLIGFETIP 175
Query: 176 AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIG 232
E A++ + + ++ S D++ G E IS + + +G
Sbjct: 176 NFHELKAILSWDEDIISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLGNKINKNLLLMG 235
Query: 233 VNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
VNCV + + +++ + + P + +VYPN G
Sbjct: 236 VNCVSFNQSALILKMLHEHLPGMPLLVYPNSG 267
>gi|367004469|ref|XP_003686967.1| hypothetical protein TPHA_0I00260 [Tetrapisispora phaffii CBS 4417]
gi|357525270|emb|CCE64533.1| hypothetical protein TPHA_0I00260 [Tetrapisispora phaffii CBS 4417]
Length = 323
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 6/198 (3%)
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-AGVDYLALETIPAEKEALA 438
IG Y + G+EY G+Y + D + + +P ++ +D + ETIP + E A
Sbjct: 126 IGAYAASI--GAEYDGNYGLFAGKIDYLKYFKPQLDEFNNDMNIDIIGFETIPNKHELEA 183
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHGELISSA--VTSCLLANPDQIQAIGVNCVRPSH 496
++ + + +++ S D G + + + +G NC+ ++
Sbjct: 184 ILSWDEDIINRPFFIALSLSDKNGLRDGTSFEEMGRLFAKYKGRNKNLVYVGGNCISYAY 243
Query: 497 VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTED-EYSILHYVPQWLEEGVNIIG 555
+R + P + I YPN G ++D +W T + S V ++ + GV IIG
Sbjct: 244 SIDNIRKLHDIVPHLNLIAYPNSGEIYDQKSKQWSSTSAIKISWEEVVNEYADAGVKIIG 303
Query: 556 GCCEVTSYEIQQMRIMID 573
GCC T +I+Q++ +D
Sbjct: 304 GCCRTTPDDIKQIKKAVD 321
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 105/275 (38%), Gaps = 38/275 (13%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYL-----------TTEPEACVETHRDFIRA 54
++ +LDG +++ + PLWS++ TE + E DF A
Sbjct: 15 EILVLDGGQGTELENRGVNI--NSPLWSTISFVNDKFWDENIENTERKCIREMFNDFKDA 72
Query: 55 GADIIQSSCYQANVDNLTKLG--YSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFN 112
GA++ + YQ + ++++ S QE +LL K + +
Sbjct: 73 GANVFSTLTYQTSFSSVSENTDIKSLQEYHELLRKITGFCRRCISDD------------D 120
Query: 113 LLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-AGVDYLAL 171
L G IG Y + G+EY G+Y + D + + +P ++ +D +
Sbjct: 121 YLLG------CIGAYAASI--GAEYDGNYGLFAGKIDYLKYFKPQLDEFNNDMNIDIIGF 172
Query: 172 ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSA--VTSCLLANPDQIQ 229
ETIP + E A++ + + +++ S D G + + +
Sbjct: 173 ETIPNKHELEAILSWDEDIINRPFFIALSLSDKNGLRDGTSFEEMGRLFAKYKGRNKNLV 232
Query: 230 AIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+G NC+ ++ +R + P + I YPN G
Sbjct: 233 YVGGNCISYAYSIDNIRKLHDIVPHLNLIAYPNSG 267
>gi|399156475|ref|ZP_10756542.1| homocysteine S-methyltransferase [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 304
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 30/238 (12%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LL+G ++ + ++ + HPLWS + +P+ + HRDFI +GA +I + Y A
Sbjct: 4 IALLEGGLGQEIQKRSM--TNAHPLWSVKVMFDQPDIVTKVHRDFIMSGARVICLNTYTA 61
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+T+ G+ +Q L+ HK+ + KE+ D G ++ A + P
Sbjct: 62 TQTRMTRHGFGDQ--LETAHKTAINLARQSLKESSVKD-----------GSVQVAGILPP 108
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
V +E S Y +S+ E +R V AL + GVD +ET+ EA A +
Sbjct: 109 L--VASYVAEVSKDYNNSLDE------YRQLV-ALQKDGVDLFLIETMSNIDEARAALTA 159
Query: 187 LREFPGQKAWLSFSCKDD--THTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242
++E + A++S + DD GE + A+ NP+ I +NC P ++
Sbjct: 160 VKE-ANKPAFVSLTIADDLSNKLRSGEDLRVAIDVLSNENPNGIM---LNCSSPEAIT 213
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 126/306 (41%), Gaps = 39/306 (12%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LL+G ++ + ++ + HPLWS + +P+ + HRDFI
Sbjct: 4 IALLEGGLGQEIQKRSM--TNAHPLWSVKVMFDQPDIVTKVHRDFIMSGARVICLNTYTA 61
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALIKPSISSQTAASIGPY 383
T R G +++ + + + E+ V+ G V ++ P ++S A
Sbjct: 62 TQTRMTRHGFGDQLETAHKTAINLARQSLKESSVKDGSVQVAGILPPLVASYVA------ 115
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
E S Y +S+ E +R V AL + GVD +ET+ EA A + +
Sbjct: 116 --------EVSKDYNNSLDE------YRQLV-ALQKDGVDLFLIETMSNIDEARAALTAV 160
Query: 444 REFPGQKAWLSFSCKDD--THTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 501
+E + A++S + DD GE + A+ NP+ I +NC P ++ +
Sbjct: 161 KE-ANKPAFVSLTIADDLSNKLRSGEDLRVAIDVLSNENPNGIM---LNCSSPEAITKAM 216
Query: 502 RCIKQSH-------PTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554
+ + + TI + G D + + + Y+ + QW+E G II
Sbjct: 217 SIMTELNIPFGGLGNGFTTISPLSPGSTVDKLSARKDLSPKVYA--EFACQWVEAGATII 274
Query: 555 GGCCEV 560
GGCCE+
Sbjct: 275 GGCCEI 280
>gi|365758864|gb|EHN00688.1| Sam4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 325
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 90/203 (44%), Gaps = 11/203 (5%)
Query: 380 IGPYGT-VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEAL 437
IGP+G + R E++G Y D + +P ++ + +D + ETIP E
Sbjct: 126 IGPWGAHICR---EFTGDYGPDPESIDFYKYFKPQLDNFNKNDKLDLIGFETIPNVHELR 182
Query: 438 ALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQA----IGVNCVR 493
A++ + ++ S + G + V + D+I +G+NCV
Sbjct: 183 AILSWDESILSKPFYIGLSVHEHGVLRDGTTVEE-VAKVIKGLGDKINPNFSLLGINCVS 241
Query: 494 PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVN 552
+ ++ + Q+ P + + YPN G V+D+ WL D+ S V Q++ G
Sbjct: 242 FNQSPDILESLHQALPNMALLAYPNSGEVYDTEKKIWLPNSDKLNSWDTVVKQYIGSGAR 301
Query: 553 IIGGCCEVTSYEIQQMRIMIDEF 575
IIGGCC + +IQ++ + ++
Sbjct: 302 IIGGCCRTSPNDIQEISTAVKKY 324
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 110/275 (40%), Gaps = 38/275 (13%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP----------EACVETHRDFIRAG 55
KV +LDG +++ IK +P+WS++ ++ + E DF+ AG
Sbjct: 16 KVLVLDGGQGTELENRGIKV--ANPVWSTIPFISDSFWSDESSANRKIVKEMFNDFLNAG 73
Query: 56 ADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLT 115
A+I+ ++ YQ + ++ SE + L + L+ D I NK
Sbjct: 74 AEILMTTTYQTSYKSV-----SENTPIKTLSEYNNLLTRIVDFSRDC--IGENKYL---- 122
Query: 116 GHIETAASIGPYGT-VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALET 173
IGP+G + R E++G Y D + +P ++ + +D + ET
Sbjct: 123 -----IGCIGPWGAHICR---EFTGDYGPDPESIDFYKYFKPQLDNFNKNDKLDLIGFET 174
Query: 174 IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQA--- 230
IP E A++ + ++ S + G + V + D+I
Sbjct: 175 IPNVHELRAILSWDESILSKPFYIGLSVHEHGVLRDGTTVEE-VAKVIKGLGDKINPNFS 233
Query: 231 -IGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+G+NCV + ++ + Q+ P + + YPN G
Sbjct: 234 LLGINCVSFNQSPDILESLHQALPNMALLAYPNSG 268
>gi|392295944|gb|EIW07047.1| Sam4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 325
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 9/202 (4%)
Query: 380 IGPYGT-VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEAL 437
IGP+G + R E++G Y D + +P +E + +D + ETIP E
Sbjct: 126 IGPWGAHICR---EFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFETIPNIHELK 182
Query: 438 ALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIGVNCVRP 494
A++ + ++ S + G E I+ + +G+NCV
Sbjct: 183 AILSWDESILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINPNFSFLGINCVSF 242
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNI 553
+ ++ + Q+ P + + YPN G V+D+ WL D+ S V Q++ G I
Sbjct: 243 NQSPDILESLHQALPNMALLAYPNSGEVYDTEKKIWLPNSDKLNSWDTVVKQYISSGARI 302
Query: 554 IGGCCEVTSYEIQQMRIMIDEF 575
IGGCC + +IQ++ + ++
Sbjct: 303 IGGCCRTSPKDIQEISAAVKKY 324
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 107/274 (39%), Gaps = 36/274 (13%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP----------EACVETHRDFIRAG 55
KV +LDG +++ I +P+WS++ +E + E DF+ AG
Sbjct: 16 KVLVLDGGQGTELENRGINV--ANPVWSTIPFISESFWSDESSANRKIVKEMFNDFLNAG 73
Query: 56 ADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLT 115
A+I+ ++ YQ + ++ SE + L + L+N D N +
Sbjct: 74 AEILMTTTYQTSYKSV-----SENTPIRTLSEYNNLLNRIVDFSR-----------NCIG 117
Query: 116 GHIETAASIGPYGT-VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALET 173
IGP+G + R E++G Y D + +P +E + +D + ET
Sbjct: 118 EDKYLIGCIGPWGAHICR---EFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFET 174
Query: 174 IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQA 230
IP E A++ + ++ S + G E I+ +
Sbjct: 175 IPNIHELKAILSWDESILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINPNFSF 234
Query: 231 IGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+G+NCV + ++ + Q+ P + + YPN G
Sbjct: 235 LGINCVSFNQSPDILESLHQALPNMALLAYPNSG 268
>gi|6324982|ref|NP_015050.1| Sam4p [Saccharomyces cerevisiae S288c]
gi|74583784|sp|Q08985.1|SAM4_YEAST RecName: Full=Homocysteine S-methyltransferase 2; AltName:
Full=S-adenosylmethionine metabolism protein 4; AltName:
Full=S-methylmethionine:homocysteine methyltransferase
2; Short=SMM:Hcy S-methyltransferase 2
gi|1370563|emb|CAA98009.1| unnamed protein product [Saccharomyces cerevisiae]
gi|190407693|gb|EDV10958.1| AdoMet-homocysteine methyltransferase [Saccharomyces cerevisiae
RM11-1a]
gi|190408547|gb|EDV11812.1| homocysteine S-methyltransferase 2 [Saccharomyces cerevisiae
RM11-1a]
gi|256270978|gb|EEU06101.1| Sam4p [Saccharomyces cerevisiae JAY291]
gi|259149884|emb|CAY86687.1| Sam4p [Saccharomyces cerevisiae EC1118]
gi|285815271|tpg|DAA11163.1| TPA: Sam4p [Saccharomyces cerevisiae S288c]
gi|323331098|gb|EGA72516.1| Sam4p [Saccharomyces cerevisiae AWRI796]
Length = 325
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 9/202 (4%)
Query: 380 IGPYGT-VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEAL 437
IGP+G + R E++G Y D + +P +E + +D + ETIP E
Sbjct: 126 IGPWGAHICR---EFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFETIPNIHELK 182
Query: 438 ALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIGVNCVRP 494
A++ + ++ S + G E I+ + +G+NCV
Sbjct: 183 AILSWDESILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINPNFSFLGINCVSF 242
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNI 553
+ ++ + Q+ P + + YPN G V+D+ WL D+ S V Q++ G I
Sbjct: 243 NQSPDILESLHQALPNMALLAYPNSGEVYDTEKKIWLPNSDKLNSWDTVVKQYISSGARI 302
Query: 554 IGGCCEVTSYEIQQMRIMIDEF 575
IGGCC + +IQ++ + ++
Sbjct: 303 IGGCCRTSPKDIQEISAAVKKY 324
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 108/274 (39%), Gaps = 36/274 (13%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP----------EACVETHRDFIRAG 55
KV +LDG +++ IK +P+WS++ +E + E DF+ AG
Sbjct: 16 KVLVLDGGQGTELENRGIKV--ANPVWSTIPFISESFWSDESSANRKIVKEMFNDFLNAG 73
Query: 56 ADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLT 115
A+I+ ++ YQ + ++ SE + L + L+N D N +
Sbjct: 74 AEILMTTTYQTSYKSV-----SENTPIRTLSEYNNLLNRIVDFSR-----------NCIG 117
Query: 116 GHIETAASIGPYGT-VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALET 173
IGP+G + R E++G Y D + +P +E + +D + ET
Sbjct: 118 EDKYLIGCIGPWGAHICR---EFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFET 174
Query: 174 IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQA 230
IP E A++ + ++ S + G E I+ +
Sbjct: 175 IPNIHELKAILSWDESILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINPNFSF 234
Query: 231 IGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+G+NCV + ++ + Q+ P + + YPN G
Sbjct: 235 LGINCVSFNQSPDILESLHQALPNMALLAYPNSG 268
>gi|151942983|gb|EDN61326.1| AdoMet-homocysteine methyltransferase [Saccharomyces cerevisiae
YJM789]
gi|207340789|gb|EDZ69030.1| YPL273Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323346059|gb|EGA80349.1| Sam4p [Saccharomyces cerevisiae Lalvin QA23]
gi|323350066|gb|EGA84233.1| Sam4p [Saccharomyces cerevisiae VL3]
Length = 261
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 9/202 (4%)
Query: 380 IGPYGT-VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEAL 437
IGP+G + R E++G Y D + +P +E + +D + ETIP E
Sbjct: 62 IGPWGAHICR---EFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFETIPNIHELK 118
Query: 438 ALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIGVNCVRP 494
A++ + ++ S + G E I+ + +G+NCV
Sbjct: 119 AILSWDESILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINPNFSFLGINCVSF 178
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNI 553
+ ++ + Q+ P + + YPN G V+D+ WL D+ S V Q++ G I
Sbjct: 179 NQSPDILESLHQALPNMALLAYPNSGEVYDTEKKIWLPNSDKLNSWDTVVKQYISSGARI 238
Query: 554 IGGCCEVTSYEIQQMRIMIDEF 575
IGGCC + +IQ++ + ++
Sbjct: 239 IGGCCRTSPKDIQEISAAVKKY 260
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 86/221 (38%), Gaps = 24/221 (10%)
Query: 49 RDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLN 108
DF+ AGA+I+ ++ YQ + ++ SE + L + L+N D
Sbjct: 3 NDFLNAGAEILMTTTYQTSYKSV-----SENTPIRTLSEYNNLLNRIVDFSR-------- 49
Query: 109 KTFNLLTGHIETAASIGPYGT-VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-V 166
N + IGP+G + R E++G Y D + +P +E + +
Sbjct: 50 ---NCIGEDKYLIGCIGPWGAHICR---EFTGDYGAEPENIDFYQYFKPQLENFNKNDKL 103
Query: 167 DYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLA 223
D + ETIP E A++ + ++ S + G E I+ +
Sbjct: 104 DLIGFETIPNIHELKAILSWDESILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDK 163
Query: 224 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+G+NCV + ++ + Q+ P + + YPN G
Sbjct: 164 INPNFSFLGINCVSFNQSPDILESLHQALPNMALLAYPNSG 204
>gi|326391635|ref|ZP_08213163.1| homocysteine S-methyltransferase [Thermoanaerobacter ethanolicus JW
200]
gi|325992336|gb|EGD50800.1| homocysteine S-methyltransferase [Thermoanaerobacter ethanolicus JW
200]
Length = 807
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 38/268 (14%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V + DG+ +Q+ +K + P + ++ T PE + HR +I AGAD+I+++ +
Sbjct: 11 RVIVFDGAMGTQLQERGLKSGE-CPEYMNI---THPEVVFDIHRSYIEAGADVIETNTFG 66
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
AN L K G E E +++ ++V++ AK+ P A SIG
Sbjct: 67 ANRIKLAKYGL-ENEVFNIVTQAVKI---AKEASKDKP----------------VALSIG 106
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
P G +L Y D MT + + V A RAG D + +ET+ EA A +
Sbjct: 107 PIGELLT-------PYGD-MTFDEAYDVFKEVVIAAERAGADIVLIETMSDMLEAKAAIL 158
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVSTL 244
+E K + + ++D T G S +T + + AIGVNC P + ++
Sbjct: 159 AAKENSNMKVICTMTFQEDGRTLMG---SDPITVVVSLQGLGLDAIGVNCSTGPDKMVSV 215
Query: 245 VRCIKQSHPTVQTIVYPNKGVKLL-DGS 271
V + Q + I PN G+ ++ DG
Sbjct: 216 VEKMSQVS-RIPIIAQPNAGMPVIRDGK 242
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 18/206 (8%)
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
A SIGP G +L Y D MT + + V A RAG D + +ET+ E
Sbjct: 101 VALSIGPIGELLT-------PYGD-MTFDEAYDVFKEVVIAAERAGADIVLIETMSDMLE 152
Query: 436 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRP 494
A A + +E K + + ++D T G S +T + + AIGVNC P
Sbjct: 153 AKAAILAAKENSNMKVICTMTFQEDGRTLMG---SDPITVVVSLQGLGLDAIGVNCSTGP 209
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGG--VWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552
+ ++V + Q + I PN G + D + L E+ S + P +E+G +
Sbjct: 210 DKMVSVVEKMSQVS-RIPIIAQPNAGMPVIRDGKTVYDLKPEEFAS---FFPLLVEKGAS 265
Query: 553 IIGGCCEVTSYEIQQMRIMIDEFNTK 578
I+GGCC T + I+ ++ + + K
Sbjct: 266 IVGGCCGTTPHYIKLVKKAVKDLKPK 291
>gi|151942529|gb|EDN60875.1| AdoMet-homocysteine methyltransferase [Saccharomyces cerevisiae
YJM789]
gi|349581549|dbj|GAA26706.1| K7_Sam4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 325
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 9/202 (4%)
Query: 380 IGPYGT-VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEAL 437
IGP+G + R E++G Y D + +P +E + +D + ETIP E
Sbjct: 126 IGPWGAHICR---EFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFETIPNIHELK 182
Query: 438 ALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIGVNCVRP 494
A++ + ++ S + G E I+ + +G+NCV
Sbjct: 183 AILSWDESVLSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINPNFSFLGINCVSF 242
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNI 553
+ ++ + Q+ P + + YPN G V+D+ WL D+ S V Q++ G I
Sbjct: 243 NQSPDILESLHQALPNMALLAYPNSGEVYDTEKKIWLPNSDKLNSWDTVVKQYISSGARI 302
Query: 554 IGGCCEVTSYEIQQMRIMIDEF 575
IGGCC + +IQ++ + ++
Sbjct: 303 IGGCCRTSPKDIQEISAAVKKY 324
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 108/274 (39%), Gaps = 36/274 (13%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP----------EACVETHRDFIRAG 55
KV +LDG +++ IK +P+WS++ +E + E DF+ AG
Sbjct: 16 KVLVLDGGQGTELENRGIKV--ANPVWSTIPFISESFWSDESSANRKIVKEMFNDFLHAG 73
Query: 56 ADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLT 115
A+I+ ++ YQ + ++ SE + L + L+N D N +
Sbjct: 74 AEILMTTTYQTSYKSV-----SENTPIRTLSEYNNLLNRIVDFSR-----------NCIG 117
Query: 116 GHIETAASIGPYGT-VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALET 173
IGP+G + R E++G Y D + +P +E + +D + ET
Sbjct: 118 EDKYLIGCIGPWGAHICR---EFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFET 174
Query: 174 IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQA 230
IP E A++ + ++ S + G E I+ +
Sbjct: 175 IPNIHELKAILSWDESVLSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINPNFSF 234
Query: 231 IGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+G+NCV + ++ + Q+ P + + YPN G
Sbjct: 235 LGINCVSFNQSPDILESLHQALPNMALLAYPNSG 268
>gi|323307617|gb|EGA60884.1| Sam4p [Saccharomyces cerevisiae FostersO]
Length = 261
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 7/201 (3%)
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEALA 438
IGP+G + E++G Y D + +P +E + +D + ETIP E A
Sbjct: 62 IGPWGAHI--CCEFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFETIPNIHELKA 119
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIGVNCVRPS 495
++ + ++ S + G E I+ + +G+NCV +
Sbjct: 120 ILSWDESILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINHNFSFLGINCVSFN 179
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNII 554
++ + Q+ P + + YPN G V+D+ WL D+ S V Q++ G II
Sbjct: 180 QSPDILESLHQALPNMALLAYPNSGEVYDTEKKIWLPNSDKLNSWDTVVKQYISSGARII 239
Query: 555 GGCCEVTSYEIQQMRIMIDEF 575
GGCC + +IQ++ + ++
Sbjct: 240 GGCCRTSPKDIQEISAAVKKY 260
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 85/220 (38%), Gaps = 22/220 (10%)
Query: 49 RDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLN 108
DF+ AGA+I+ ++ YQ + ++ SE + L + L+N D
Sbjct: 3 NDFLNAGAEILMTTTYQTSYKSV-----SENTPIRTLSEYNNLLNRIVDFSR-------- 49
Query: 109 KTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VD 167
N + IGP+G + E++G Y D + +P +E + +D
Sbjct: 50 ---NCIGEDKYLIGCIGPWGAHI--CCEFTGDYGAEPENIDFYQYFKPQLENFNKNDKLD 104
Query: 168 YLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLAN 224
+ ETIP E A++ + ++ S + G E I+ +
Sbjct: 105 LIGFETIPNIHELKAILSWDESILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKI 164
Query: 225 PDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+G+NCV + ++ + Q+ P + + YPN G
Sbjct: 165 NHNFSFLGINCVSFNQSPDILESLHQALPNMALLAYPNSG 204
>gi|406864213|gb|EKD17259.1| homocysteine S-methyltransferase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 443
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 7 VKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVE-THRDFIRAGADIIQSSCY 64
+ LLDG TS V H D PLWSS L ++P A + TH F RAG+D++ S+ Y
Sbjct: 19 ILLLDGGLGTSLVDEHGCVFNDSTPLWSSHLLISDPTAALRATHAAFARAGSDVLLSATY 78
Query: 65 QANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
QA+ + + +D + + QLM SA D D L G + A S+
Sbjct: 79 QASFAGFART----RAGIDAV-AAAQLMRSAVDVAR---DAFLGSPAG---GGGKVALSL 127
Query: 125 GPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALV 162
G YG + EYSG Y + M+ A L +WH + A V
Sbjct: 128 GAYGATMVPSQEYSGRYDEERMSVAGLESWHWERMRAFV 166
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 146/403 (36%), Gaps = 101/403 (25%)
Query: 265 VKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVE-THRDFIRGHIETAASIGP 322
+ LLDG TS V H D PLWSS L ++P A + TH F R + S
Sbjct: 19 ILLLDGGLGTSLVDEHGCVFNDSTPLWSSHLLISDPTAALRATHAAFARAGSDVLLSATY 78
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
+ +G +D++ A L+ + V D + A S+G
Sbjct: 79 QASFAGFARTRAG--IDAVAAAQLM-------RSAVDVARDAFLGSPAGGGGKVALSLGA 129
Query: 383 YGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALV----RAG---------------- 421
YG + EYSG Y + M+ A L +WH + A V R G
Sbjct: 130 YGATMVPSQEYSGRYDEERMSVAGLESWHWERMRAFVPGRERVGSFEGGGGGGGGGGGGE 189
Query: 422 ---------------------------------VDYLALETIPAEKEALALVKLLREFPG 448
V ++A ET+P E A+ +++ G
Sbjct: 190 GPEDEDGDEDGDEDGDGDGDGDEEEEKVRVWKEVGFVAFETLPLRLEIEAVRRVMGRVRG 249
Query: 449 QKAWLSFSC---KDDTHTSHGELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTL 500
+C + G + V S L +A P +G+NC + V +L
Sbjct: 250 GARDFWIACVFPGEGNRLPDGTCVRDVVRSMLGKGEGMAVP---MGVGLNCTKVGKVESL 306
Query: 501 VRCIKQSHPTV---------QTIVYPN--KGGVWDSVHMKWLDTE----------DEYSI 539
V + + +VYP+ G V+D+ +W+ DE ++
Sbjct: 307 VLEFESEVREMVAEGEAEWPSLVVYPDGTNGEVYDTTTKEWVKAAAAGSQSMMSWDE-TM 365
Query: 540 LHYVPQWLEEGV---NIIGGCCEVTSYEIQQMRIMIDEFNTKK 579
V + E G+ ++GGCC+ T +I ++R+ ID+ ++ +
Sbjct: 366 WGIVKRATERGLWKSILVGGCCKTTPEDIGKLRMRIDQSSSDR 408
>gi|367015047|ref|XP_003682023.1| hypothetical protein TDEL_0E05690 [Torulaspora delbrueckii]
gi|359749684|emb|CCE92812.1| hypothetical protein TDEL_0E05690 [Torulaspora delbrueckii]
Length = 328
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 7/204 (3%)
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV-RAGVDYLALETIPAEKEA 436
S+GP+G + E++G+Y D + +P ++ + +D + ET+P E
Sbjct: 123 GSVGPWGAHV--CCEFTGNYGLHPESIDYYEYFKPQLDNFNGQDEIDLIGFETVPNFHEL 180
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIGVNCVR 493
A++ + ++ S ++ G E I + +GVNCV
Sbjct: 181 KAILSWDETKIAKPFYIGLSVHNNGVLRDGTTMEEIGEYIKGLGEKISSNFLLLGVNCVS 240
Query: 494 PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVN 552
+ S +V+ I ++ P + + YPN G V+D+ W D +D+ S V +++ G
Sbjct: 241 FNDSSDMVKSIHKALPDMPLLAYPNSGEVYDTEKKIWFDNKDKLDSWDSVVRSYIDNGAR 300
Query: 553 IIGGCCEVTSYEIQQMRIMIDEFN 576
IIGGCC + +I ++ + ++N
Sbjct: 301 IIGGCCRTSPRDIAEVSAAVKKYN 324
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 112/275 (40%), Gaps = 38/275 (13%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP---------EACVET-HRDFIRAG 55
++ +LDG +++ I+ +P+WS++ +E VE+ DF ++G
Sbjct: 15 EILVLDGGQGTELENRGIEV--ANPVWSTIPFLSESFWTDSSSKERKIVESVFDDFKKSG 72
Query: 56 ADIIQSSCYQANVDNLTKLGYSEQ--EALDLLHKSVQLMNSAKDKENQTPDINLNKTFNL 113
++I+ + YQ + ++ + + E LL + V+ S E
Sbjct: 73 SNILMTITYQTSFTSIVENTQFKTLAEYNTLLDRIVKFSRSCIGDER------------Y 120
Query: 114 LTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV-RAGVDYLALE 172
L G S+GP+G + E++G+Y D + +P ++ + +D + E
Sbjct: 121 LIG------SVGPWGAHV--CCEFTGNYGLHPESIDYYEYFKPQLDNFNGQDEIDLIGFE 172
Query: 173 TIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQ 229
T+P E A++ + ++ S ++ G E I +
Sbjct: 173 TVPNFHELKAILSWDETKIAKPFYIGLSVHNNGVLRDGTTMEEIGEYIKGLGEKISSNFL 232
Query: 230 AIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+GVNCV + S +V+ I ++ P + + YPN G
Sbjct: 233 LLGVNCVSFNDSSDMVKSIHKALPDMPLLAYPNSG 267
>gi|392940219|ref|ZP_10305863.1| LOW QUALITY PROTEIN: Homocysteine S-methyltransferase/B12 binding
domain/Pterin binding enzyme [Thermoanaerobacter
siderophilus SR4]
gi|392291969|gb|EIW00413.1| LOW QUALITY PROTEIN: Homocysteine S-methyltransferase/B12 binding
domain/Pterin binding enzyme [Thermoanaerobacter
siderophilus SR4]
Length = 807
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 120/268 (44%), Gaps = 38/268 (14%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V + DG+ +Q+ +K + P + ++ T PE + HR +I AGAD+I+++ +
Sbjct: 11 RVIVFDGAMGTQLQERGLKSGE-CPEYMNI---THPEVVFDIHRSYIEAGADVIETNTFG 66
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
AN L K G E E +++ ++V++ AK+ P A SIG
Sbjct: 67 ANRIKLAKYGL-ENEVFNIVTQAVKI---AKEASKDKP----------------VALSIG 106
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
P G +L Y D MT + + + A RAG D + +ET+ EA A +
Sbjct: 107 PIGELLT-------PYGD-MTFDEAYDVFKEVIIAAERAGADIVLIETMSDMLEAKAAIL 158
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVSTL 244
+E K + + ++D T G S +T + + AIGVNC P + ++
Sbjct: 159 AAKENSNMKVICTMTFQEDGRTLMG---SDPITVVVSLQGLGLDAIGVNCSTGPDKMVSV 215
Query: 245 VRCIKQSHPTVQTIVYPNKGVKLL-DGS 271
V + Q + I PN G+ ++ DG
Sbjct: 216 VEKMSQVS-RIPIIAQPNAGMPVIRDGK 242
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 18/206 (8%)
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
A SIGP G +L Y D MT + + + A RAG D + +ET+ E
Sbjct: 101 VALSIGPIGELLT-------PYGD-MTFDEAYDVFKEVIIAAERAGADIVLIETMSDMLE 152
Query: 436 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRP 494
A A + +E K + + ++D T G S +T + + AIGVNC P
Sbjct: 153 AKAAILAAKENSNMKVICTMTFQEDGRTLMG---SDPITVVVSLQGLGLDAIGVNCSTGP 209
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGG--VWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552
+ ++V + Q + I PN G + D + L E+ S + P +E+G +
Sbjct: 210 DKMVSVVEKMSQVS-RIPIIAQPNAGMPVIRDGKTVYDLKPEEFAS---FFPLLVEKGAS 265
Query: 553 IIGGCCEVTSYEIQQMRIMIDEFNTK 578
I+GGCC T + I+ ++ + + K
Sbjct: 266 IVGGCCGTTPHYIKLVKKAVKDLKPK 291
>gi|167039856|ref|YP_001662841.1| homocysteine S-methyltransferase [Thermoanaerobacter sp. X514]
gi|300915381|ref|ZP_07132695.1| homocysteine S-methyltransferase [Thermoanaerobacter sp. X561]
gi|307724819|ref|YP_003904570.1| homocysteine S-methyltransferase [Thermoanaerobacter sp. X513]
gi|166854096|gb|ABY92505.1| homocysteine S-methyltransferase [Thermoanaerobacter sp. X514]
gi|300888657|gb|EFK83805.1| homocysteine S-methyltransferase [Thermoanaerobacter sp. X561]
gi|307581880|gb|ADN55279.1| homocysteine S-methyltransferase [Thermoanaerobacter sp. X513]
Length = 807
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 38/268 (14%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V + DG+ +Q+ +K + P + ++ T PE + HR +I AGAD+I+++ +
Sbjct: 11 RVIVFDGAMGTQLQERGLKTGE-CPEYMNI---THPEVVFDIHRSYIEAGADVIETNTFG 66
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
AN L K G E E +++ ++V++ AK+ P A SIG
Sbjct: 67 ANRIKLAKYGL-ENEVFNIVTQAVKI---AKEASKDKP----------------VALSIG 106
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
P G +L Y D MT + + V A RAG D + +ET+ EA A +
Sbjct: 107 PIGELLT-------PYGD-MTFDEAYDVFKEVVIAAERAGADIVLIETMSDMLEAKAAIL 158
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVSTL 244
+E K + + ++D T G S +T + + AIGVNC P + ++
Sbjct: 159 AAKENSNMKVICTMTFQEDGRTLMG---SDPITVVVSLQGLGLDAIGVNCSTGPDKMVSV 215
Query: 245 VRCIKQSHPTVQTIVYPNKGVKLL-DGS 271
V + Q + I PN G+ ++ DG
Sbjct: 216 VEKMSQVS-RIPIIAQPNAGMPVIRDGK 242
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 18/206 (8%)
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
A SIGP G +L Y D MT + + V A RAG D + +ET+ E
Sbjct: 101 VALSIGPIGELLT-------PYGD-MTFDEAYDVFKEVVIAAERAGADIVLIETMSDMLE 152
Query: 436 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRP 494
A A + +E K + + ++D T G S +T + + AIGVNC P
Sbjct: 153 AKAAILAAKENSNMKVICTMTFQEDGRTLMG---SDPITVVVSLQGLGLDAIGVNCSTGP 209
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGG--VWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552
+ ++V + Q + I PN G + D + L E+ S + P +E+G +
Sbjct: 210 DKMVSVVEKMSQVS-RIPIIAQPNAGMPVIRDGKTVYDLKPEEFAS---FFPSLVEKGAS 265
Query: 553 IIGGCCEVTSYEIQQMRIMIDEFNTK 578
I+GGCC T + I+ ++ + + K
Sbjct: 266 IVGGCCGTTPHYIKLVKKAVKDLKPK 291
>gi|71650841|ref|XP_814110.1| homocysteine S-methyltransferase [Trypanosoma cruzi strain CL
Brener]
gi|70879055|gb|EAN92259.1| homocysteine S-methyltransferase, putative [Trypanosoma cruzi]
Length = 410
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 142/348 (40%), Gaps = 80/348 (22%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V + DG+ + + + +WSS L +E + HR +I AG D++ + YQ
Sbjct: 9 VLIKDGAMGTLLESWDVDYAKAGSMWSSSVLLSEMDLVKRAHRAYIDAGCDVLLTCTYQM 68
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQ-------------LMNSAKDKENQTPDINLNKTF-- 111
+ + S+ +L+ ++VQ L + KE +T I++ +
Sbjct: 69 HEEGCAA---SKVTMCELVDRAVQAARHTMPQRKQKGLTEESTAKERRTGGIDVFRYALS 125
Query: 112 ----NLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA-LVRAG- 165
N + A S+GPYG+ L G EY G Y S+ EA + A+H +EA L G
Sbjct: 126 SIKDNGQERVVLLAGSLGPYGSSLPGGQEYLGEY--SIHEAVINAFHARRLEAFLCNVGE 183
Query: 166 -----VDYLALETIPAEKEALALV------KLLREFPGQKAWLSFSCKD----------- 203
VD+L LET P EAL ++ ++LR P ++++ K+
Sbjct: 184 KHAFKVDFLLLETFPRLDEALGILSFVNQHEILRTAPFCFSFIAVPVKNPLPENADDDAL 243
Query: 204 --------------DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI- 248
D +T G L S +C A + +G NC P VS + +
Sbjct: 244 DNWWNAAASSIRLPDGNTFEGAL-SELRGNCGTA----LVGMGCNCSGPLEVSLVATALL 298
Query: 249 ----KQSHPTVQTIVYPNKGVKLLDGSF--------TSQVSRHTIKDV 284
+ + + ++YPN G K DG + TS R +++D+
Sbjct: 299 HKKRQDTEGPLVLLLYPNSGEKFTDGQWKKPLQQIQTSAAERLSMRDL 346
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 118/320 (36%), Gaps = 72/320 (22%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIET------- 316
GV + DG+ + + + +WSS L +E + HR +I +
Sbjct: 8 GVLIKDGAMGTLLESWDVDYAKAGSMWSSSVLLSEMDLVKRAHRAYIDAGCDVLLTCTYQ 67
Query: 317 ------AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKP 370
AAS ++ + + H + + L + G+D
Sbjct: 68 MHEEGCAASKVTMCELVDRAVQAARHTMPQRKQKGLT--EESTAKERRTGGIDVFRYALS 125
Query: 371 SISSQ-------TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA-LVRAG- 421
SI A S+GPYG+ L G EY G Y S+ EA + A+H +EA L G
Sbjct: 126 SIKDNGQERVVLLAGSLGPYGSSLPGGQEYLGEY--SIHEAVINAFHARRLEAFLCNVGE 183
Query: 422 -----VDYLALETIPAEKEALALV------KLLREFPGQKAWLSFSCKD----------- 459
VD+L LET P EAL ++ ++LR P ++++ K+
Sbjct: 184 KHAFKVDFLLLETFPRLDEALGILSFVNQHEILRTAPFCFSFIAVPVKNPLPENADDDAL 243
Query: 460 --------------DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI- 504
D +T G L S +C A + +G NC P VS + +
Sbjct: 244 DNWWNAAASSIRLPDGNTFEGAL-SELRGNCGTA----LVGMGCNCSGPLEVSLVATALL 298
Query: 505 ----KQSHPTVQTIVYPNKG 520
+ + + ++YPN G
Sbjct: 299 HKKRQDTEGPLVLLLYPNSG 318
>gi|345018089|ref|YP_004820442.1| homocysteine S-methyltransferase [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033432|gb|AEM79158.1| homocysteine S-methyltransferase [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 807
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 121/269 (44%), Gaps = 40/269 (14%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V + DG+ +Q+ +K + P + ++ T PE + HR +I AGAD+I+++ +
Sbjct: 11 RVIVFDGAMGTQLQERGLKTGE-CPEYMNI---THPEVVFDIHRSYIEAGADVIETNTFG 66
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMN-SAKDKENQTPDINLNKTFNLLTGHIETAASI 124
AN L K G E E +++ ++V++ +A+DK A SI
Sbjct: 67 ANRIKLAKYGL-ENEVFNIVTQAVKIAKRAARDK--------------------PVALSI 105
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GP G +L Y D MT + + V A RAG D + +ET+ EA A +
Sbjct: 106 GPTGELLT-------PYGD-MTFDEAYDVFKEVVIAAERAGADIVLIETMSDMLEAKAAI 157
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVST 243
+E K + + ++D T G S +T + + AIGVNC P + +
Sbjct: 158 LAAKENSNMKVICTMTFQEDGRTLMG---SDPITVVVSLQGLGLDAIGVNCSTGPDKMVS 214
Query: 244 LVRCIKQSHPTVQTIVYPNKGVKLL-DGS 271
+V I Q + I PN G+ ++ DG
Sbjct: 215 VVEKISQVA-RIPIIAQPNAGMPVIRDGK 242
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 133/319 (41%), Gaps = 44/319 (13%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V + DG+ +Q+ +K + P + ++ T PE + HR +I + + +G
Sbjct: 12 VIVFDGAMGTQLQERGLKTGE-CPEYMNI---THPEVVFDIHRSYIEAGADVIET-NTFG 66
Query: 325 TVLRDGSEYS--GHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
++Y + +T+A IA RA D KP A SIGP
Sbjct: 67 ANRIKLAKYGLENEVFNIVTQAVKIAK---------RAARD-----KP-----VALSIGP 107
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
G +L Y D MT + + V A RAG D + +ET+ EA A +
Sbjct: 108 TGELLT-------PYGD-MTFDEAYDVFKEVVIAAERAGADIVLIETMSDMLEAKAAILA 159
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVSTLV 501
+E K + + ++D T G S +T + + AIGVNC P + ++V
Sbjct: 160 AKENSNMKVICTMTFQEDGRTLMG---SDPITVVVSLQGLGLDAIGVNCSTGPDKMVSVV 216
Query: 502 RCIKQSHPTVQTIVYPNKGG--VWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
I Q + I PN G + D + L E+ S + P +E+G +I+GGCC
Sbjct: 217 EKISQVA-RIPIIAQPNAGMPVIRDGKTVYDLKPEEFAS---FFPLLVEKGASIVGGCCG 272
Query: 560 VTSYEIQQMRIMIDEFNTK 578
T + I+ ++ + + K
Sbjct: 273 TTPHYIKLVKKAVKDLKPK 291
>gi|283778961|ref|YP_003369716.1| homocysteine S-methyltransferase [Pirellula staleyi DSM 6068]
gi|283437414|gb|ADB15856.1| homocysteine S-methyltransferase [Pirellula staleyi DSM 6068]
Length = 293
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 131/310 (42%), Gaps = 46/310 (14%)
Query: 269 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACV--ETHRDFIRGHIETAASIGPYGTV 326
DG+ ++++R + G P+WS+ LTT+ V + H D+++
Sbjct: 16 DGATGTELNRRGLDT--GLPMWSANALTTDTGLNVLRQIHLDYLQAG------------- 60
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
D +T A+ HR + + V A + L + + + + A G V
Sbjct: 61 -----------ADILT-ANTFRTHRRALASKVHAARE-LTMRAVATAQEAIAEFGQAAQV 107
Query: 387 LRDGSEYSGHYVDSMTEADLI--AWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
S Y + D + A H ++ LV AGVD L +ET+ + +EA+ KL
Sbjct: 108 AGSVSPLEDCYRPDLVPPDDMCRAEHSERIQHLVDAGVDLLLIETMSSIREAVIAAKLA- 166
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH--VSTLVR 502
G +SF C + GE ++ A L P ++A+GVNC P+H LV
Sbjct: 167 TITGLPTLVSFVCDGEGRILSGEPVAVAAELLL---PLGVKALGVNC-GPAHTLAKPLVE 222
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY--SILHYVPQWLEEGVNIIGGCCEV 560
+ P I Y N G + W++T+ E S LH+ W + I+GGCC
Sbjct: 223 LRRICGPDFPLIAYGNIG--YADEAQGWINTDAESPESYLHHAETWPAQ---ILGGCCGT 277
Query: 561 TSYEIQQMRI 570
T I+++R+
Sbjct: 278 TPAHIRRLRV 287
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 113/258 (43%), Gaps = 37/258 (14%)
Query: 11 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACV--ETHRDFIRAGADIIQSSCYQANV 68
DG+ ++++R + G P+WS+ LTT+ V + H D+++AGADI+ ++ ++ +
Sbjct: 16 DGATGTELNRRGLDT--GLPMWSANALTTDTGLNVLRQIHLDYLQAGADILTANTFRTHR 73
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
L ++ +E L ++V A + Q + A S+ P
Sbjct: 74 RALASKVHAARE---LTMRAVATAQEAIAEFGQAAQV---------------AGSVSP-- 113
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L D D M A+ H ++ LV AGVD L +ET+ + +EA+ KL
Sbjct: 114 --LEDCYRPDLVPPDDMCRAE----HSERIQHLVDAGVDLLLIETMSSIREAVIAAKLA- 166
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH--VSTLVR 246
G +SF C + GE ++ A L P ++A+GVNC P+H LV
Sbjct: 167 TITGLPTLVSFVCDGEGRILSGEPVAVAAELLL---PLGVKALGVNC-GPAHTLAKPLVE 222
Query: 247 CIKQSHPTVQTIVYPNKG 264
+ P I Y N G
Sbjct: 223 LRRICGPDFPLIAYGNIG 240
>gi|167037117|ref|YP_001664695.1| homocysteine S-methyltransferase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320115535|ref|YP_004185694.1| homocysteine S-methyltransferase [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166855951|gb|ABY94359.1| homocysteine S-methyltransferase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319928626|gb|ADV79311.1| homocysteine S-methyltransferase [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 807
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 38/268 (14%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V + DG+ +Q+ +K + P + ++ T PE + HR +I AGAD+I+++ +
Sbjct: 11 RVIVFDGAMGTQLQERGLKTGE-CPEYMNI---THPEVVFDIHRSYIEAGADVIETNTFG 66
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
AN L K G E E +++ ++V++ AK+ P A SIG
Sbjct: 67 ANRIKLAKYGL-ENEVFNIVTQAVKI---AKEASKDKP----------------VALSIG 106
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
P G +L Y D MT + + V A RAG D + +ET+ EA A +
Sbjct: 107 PIGELLT-------PYGD-MTFDEAYDVFKEVVIAAERAGADIVLIETMSDMLEAKAAIL 158
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVSTL 244
+E K + + ++D T G S +T + + AIGVNC P + ++
Sbjct: 159 AAKENSNMKVICTMTFQEDGRTLMG---SDPITVVVSLQGLGLDAIGVNCSTGPDKMVSV 215
Query: 245 VRCIKQSHPTVQTIVYPNKGVKLL-DGS 271
V + Q + I PN G+ ++ DG
Sbjct: 216 VEKMSQVS-RIPIIAQPNAGMPVIRDGK 242
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 18/206 (8%)
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
A SIGP G +L Y D MT + + V A RAG D + +ET+ E
Sbjct: 101 VALSIGPIGELLT-------PYGD-MTFDEAYDVFKEVVIAAERAGADIVLIETMSDMLE 152
Query: 436 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRP 494
A A + +E K + + ++D T G S +T + + AIGVNC P
Sbjct: 153 AKAAILAAKENSNMKVICTMTFQEDGRTLMG---SDPITVVVSLQGLGLDAIGVNCSTGP 209
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGG--VWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552
+ ++V + Q + I PN G + D + L E+ S + P +E+G +
Sbjct: 210 DKMVSVVEKMSQVS-RIPIIAQPNAGMPVIRDGKTVYDLKPEEFAS---FFPLLVEKGAS 265
Query: 553 IIGGCCEVTSYEIQQMRIMIDEFNTK 578
I+GGCC T + I+ ++ + + K
Sbjct: 266 IVGGCCGTTPHYIKLVKKAVKDLKPK 291
>gi|385332496|ref|YP_005886447.1| homocysteine S-methyltransferase family protein [Marinobacter
adhaerens HP15]
gi|311695646|gb|ADP98519.1| homocysteine S-methyltransferase family protein [Marinobacter
adhaerens HP15]
Length = 301
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 128/328 (39%), Gaps = 52/328 (15%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
K V LLDG ++ R + LWS + +P+ E H DFIR T
Sbjct: 2 KSVALLDGGLGQEIYRRAMNVT--SLLWSVAVMREQPDVVTEVHADFIRAGARTLTLNTY 59
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
T R E G + ++ + R AL A VD + P + S
Sbjct: 60 AATPTRLAREGLGDEIGTIHQRAFEVLER--AIALTGADVDIAGCLPPLVGSYR------ 111
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
S+ + D +E D++ +++G D +ET+ EA A
Sbjct: 112 --------SQPDRTFEDLKSEFDILVK--------LQSGADVFLIETMTNSLEAKAACAA 155
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
E G+ ++F + D GE ++ AV + + P AI +NC P +S
Sbjct: 156 ASE-SGKPFGVAFRLEADGKLRSGETLAEAVEAVRASGP---TAIMLNCCDPEVIS---- 207
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVH----------MKWLDTEDEYSILHY---VPQWLEE 549
Q+ P + + YP GG ++ + L+ + S Y V QWL++
Sbjct: 208 ---QAMPELAGL-YPCTGGYANAFKTVEPMAGGALVDELEARQDVSPGVYGLQVKQWLDD 263
Query: 550 GVNIIGGCCEVTSYEIQQMR-IMIDEFN 576
G ++GGCCE+T I + ++ E+N
Sbjct: 264 GAGVVGGCCEITPEHISHLADVLTGEYN 291
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 103/264 (39%), Gaps = 52/264 (19%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V LLDG ++ R + LWS + +P+ E H DFIRAGA + + Y A
Sbjct: 4 VALLDGGLGQEIYRRAMNVT--SLLWSVAVMREQPDVVTEVHADFIRAGARTLTLNTYAA 61
Query: 67 NVDNLTKLGYSE------QEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIET 120
L + G + Q A ++L +++ L + D P +
Sbjct: 62 TPTRLAREGLGDEIGTIHQRAFEVLERAIALTGADVDIAGCLPPL--------------- 106
Query: 121 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 180
+G Y S+ + D +E D++ +++G D +ET+ EA
Sbjct: 107 ---VGSY------RSQPDRTFEDLKSEFDILVK--------LQSGADVFLIETMTNSLEA 149
Query: 181 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 240
A E G+ ++F + D GE ++ AV + + P AI +NC P
Sbjct: 150 KAACAAASE-SGKPFGVAFRLEADGKLRSGETLAEAVEAVRASGP---TAIMLNCCDPEV 205
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKG 264
+S Q+ P + + YP G
Sbjct: 206 IS-------QAMPELAGL-YPCTG 221
>gi|343470395|emb|CCD16888.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 432
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 123/327 (37%), Gaps = 66/327 (20%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ + P+WS+ + EP A H ++ AGADI+ +S YQ N
Sbjct: 27 VLDGAMGTEIEERRPDLLPLGPMWSASVVHKEPSAVQSVHEAYVNAGADILLTSTYQINT 86
Query: 69 DNLTKLGYSEQEALD----LLHKSV-----QLMNSAKDKENQTPDIN---LNKTFNLLTG 116
LG + + +D LL S+ AK K P + + F L
Sbjct: 87 KGCATLGVAIPDLVDAAVRLLRNSITPERTSATEQAKAKAKLDPSVKRRGASAVFAPLLY 146
Query: 117 HIE---------TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV----- 162
I S+ PYG++ G EY G Y ++ E + ++ V A +
Sbjct: 147 GIRDDPSKCPVLIGGSMSPYGSLAGYGQEYHGKY--TVDETIIDEFYNQRVRAFIDYTSD 204
Query: 163 --RAGVDYLALETIPAEKEALALVKLLR----------------------EFPGQKA--- 195
R VD+L LET P KEA+ + L + P A
Sbjct: 205 TPRPKVDFLMLETFPLLKEAVGVFSWLSHQRDGVLDTAPVCISFVSVLDGDRPSADADDA 264
Query: 196 ----WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ- 250
W + S + H G + + + Q+ +G NC P VS + + +
Sbjct: 265 AVEEWWN-SAESSIHLPDGNTYLQVLDTLMELRSPQLAGLGANCCSPLEVSVVASLLLKK 323
Query: 251 -----SHPTVQTIVYPNKGVKLLDGSF 272
P++ ++Y N G + +G +
Sbjct: 324 KKKHVEDPSLVLLLYSNSGEEFTEGEW 350
>gi|297545008|ref|YP_003677310.1| homocysteine S-methyltransferase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842783|gb|ADH61299.1| homocysteine S-methyltransferase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 807
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 38/268 (14%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V + DG+ +Q+ +K + P + ++ T PE + HR +I AGAD+I+++ +
Sbjct: 11 RVIVFDGAMGTQLQERGLKSGE-CPEYMNI---THPEVVFDIHRSYIEAGADVIETNTFG 66
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
AN L K G E E +++ ++V++ AK+ P A SIG
Sbjct: 67 ANRIKLAKYGL-ENEVFNIVTQAVKI---AKEASKDKP----------------VALSIG 106
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
P G +L Y D MT + + V A RAG D + +ET+ EA A +
Sbjct: 107 PIGELLT-------PYGD-MTFDEAYDVFKEVVIAAERAGADIVLIETMSDMLEAKAAIL 158
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVSTL 244
+E K + + ++D T G S +T + + AIGVNC P + +
Sbjct: 159 AAKENSNMKVICTMTFQEDGRTLMG---SDPITVVVSLQGLGLDAIGVNCSTGPDKMINV 215
Query: 245 VRCIKQSHPTVQTIVYPNKGVKLL-DGS 271
V + Q + I PN G+ ++ DG
Sbjct: 216 VEKMSQVS-RIPIIAQPNAGMPVIRDGK 242
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 18/206 (8%)
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
A SIGP G +L Y D MT + + V A RAG D + +ET+ E
Sbjct: 101 VALSIGPIGELLT-------PYGD-MTFDEAYDVFKEVVIAAERAGADIVLIETMSDMLE 152
Query: 436 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRP 494
A A + +E K + + ++D T G S +T + + AIGVNC P
Sbjct: 153 AKAAILAAKENSNMKVICTMTFQEDGRTLMG---SDPITVVVSLQGLGLDAIGVNCSTGP 209
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGG--VWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552
+ +V + Q + I PN G + D + L E+ S + P +E+G +
Sbjct: 210 DKMINVVEKMSQVS-RIPIIAQPNAGMPVIRDGKTVYDLKPEEFAS---FFPSLVEKGAS 265
Query: 553 IIGGCCEVTSYEIQQMRIMIDEFNTK 578
I+GGCC T + I+ ++ + + K
Sbjct: 266 IVGGCCGTTPHYIKLVKEAVKDLKPK 291
>gi|365758151|gb|EHN00009.1| Sam4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 325
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 90/203 (44%), Gaps = 11/203 (5%)
Query: 380 IGPYGT-VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEAL 437
IGP+G + R E++G Y D + +P ++ + +D + ETIP E
Sbjct: 126 IGPWGAHICR---EFTGDYGPDPESIDFYKYFKPQLDNFNKNDKLDLIGFETIPNVHELR 182
Query: 438 ALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQA----IGVNCVR 493
A++ + ++ S + G + V + D+I +G+NCV
Sbjct: 183 AILSWDESILSKPFYIGLSVHEHGVLRDGTTMEE-VAKVIKGLGDKINPNFSLLGINCVS 241
Query: 494 PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVN 552
+ ++ + Q+ P + + YPN G V+D+ WL D+ S V Q++ G
Sbjct: 242 FNQSPDILESLHQALPDMALLAYPNSGEVYDTEKKIWLPNSDKLNSWDTVVKQYIGSGAR 301
Query: 553 IIGGCCEVTSYEIQQMRIMIDEF 575
IIGGCC + +IQ++ + ++
Sbjct: 302 IIGGCCRTSPNDIQEISTAVKKY 324
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 110/275 (40%), Gaps = 38/275 (13%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP----------EACVETHRDFIRAG 55
KV +LDG +++ IK +P+WS++ ++ + E DF+ AG
Sbjct: 16 KVLVLDGGQGTELENRGIKV--ANPVWSTIPFISDSFWSDESSANRKIVKEMFNDFLNAG 73
Query: 56 ADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLT 115
A+I+ ++ YQ + ++ SE + L + L+ D I NK
Sbjct: 74 AEILMTTTYQTSYKSV-----SENTPIKTLSEYNNLLTRIVDFSRDC--IGENKYL---- 122
Query: 116 GHIETAASIGPYGT-VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALET 173
IGP+G + R E++G Y D + +P ++ + +D + ET
Sbjct: 123 -----IGCIGPWGAHICR---EFTGDYGPDPESIDFYKYFKPQLDNFNKNDKLDLIGFET 174
Query: 174 IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQA--- 230
IP E A++ + ++ S + G + V + D+I
Sbjct: 175 IPNVHELRAILSWDESILSKPFYIGLSVHEHGVLRDGTTMEE-VAKVIKGLGDKINPNFS 233
Query: 231 -IGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+G+NCV + ++ + Q+ P + + YPN G
Sbjct: 234 LLGINCVSFNQSPDILESLHQALPDMALLAYPNSG 268
>gi|85115871|ref|XP_964955.1| hypothetical protein NCU00799 [Neurospora crassa OR74A]
gi|28926753|gb|EAA35719.1| predicted protein [Neurospora crassa OR74A]
Length = 361
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 118/303 (38%), Gaps = 62/303 (20%)
Query: 1 MSKICKVKLLDGSF-TSQVSRHTIKDVDGHPLWSS-VYLTTEPEACVETHRDFIRAGADI 58
M+ V++LDG T+ H I PLWSS + ++ E + + H F +AGA+I
Sbjct: 1 MATPIPVQILDGGMGTTLEDMHDITFSFETPLWSSHLLVSGEEDKLSDCHEAFKQAGANI 60
Query: 59 IQSSCYQANVDNLTKLGYSEQEALD-------------LLHKSVQLMNSAKDKENQTPDI 105
I ++ YQ +++ +D L ++V L +A E +
Sbjct: 61 ISTATYQISINGFAATKAPRSGTVDEEREGIEKEEIPRFLSRAVVLAANAAGTEGKV--- 117
Query: 106 NLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA-WHRPNVEALVRA 164
A S+GPYG + +EYSG Y + WH+ ++
Sbjct: 118 ---------------ALSLGPYGATMIPSTEYSGRYDPEHQHVQALGKWHKERLDLFKDV 162
Query: 165 G---VDYLALETIPAEKEALALVKLLR------EFPGQKAWLSFSC-KDDTHTSHGELIS 214
V+Y+A ET+P E +A+ LL G+ W+S DD G +
Sbjct: 163 DPNQVNYIAFETVPRLDEIVAIRNLLSADNIPTSLRGRPVWISSPYPNDDGKLPDGSTVE 222
Query: 215 SAVTSCL-----LANPDQIQAIGVNCVRPSHVSTLVR--------CIKQSHPTV--QTIV 259
V + L L P IG+NC + + +LV+ CIK ++
Sbjct: 223 EVVKAVLTHREGLETP---WGIGINCTKVEKLDSLVKRYEDAIQTCIKNGEQMAWPSLVL 279
Query: 260 YPN 262
YP+
Sbjct: 280 YPD 282
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 109/259 (42%), Gaps = 44/259 (16%)
Query: 357 LVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA-WHRPNVE 415
L RA V LA + A S+GPYG + +EYSG Y + WH+ ++
Sbjct: 100 LSRAVV--LAANAAGTEGKVALSLGPYGATMIPSTEYSGRYDPEHQHVQALGKWHKERLD 157
Query: 416 ALVRAG---VDYLALETIPAEKEALALVKLLR------EFPGQKAWLSFSC-KDDTHTSH 465
V+Y+A ET+P E +A+ LL G+ W+S DD
Sbjct: 158 LFKDVDPNQVNYIAFETVPRLDEIVAIRNLLSADNIPTSLRGRPVWISSPYPNDDGKLPD 217
Query: 466 GELISSAVTSCL-----LANPDQIQAIGVNCVRPSHVSTLVR--------CIKQSHPTV- 511
G + V + L L P IG+NC + + +LV+ CIK
Sbjct: 218 GSTVEEVVKAVLTHREGLETP---WGIGINCTKVEKLDSLVKRYEDAIQTCIKNGEQMAW 274
Query: 512 -QTIVYPN--KGGVWDSVHMKW------LDTEDEY-SILHYVPQWLEEGVN----IIGGC 557
++YP+ KG V+++ W +TE + ++L V + + N ++GGC
Sbjct: 275 PSLVLYPDGTKGEVYNTATKTWELSPGHKETEAPWETVLASVVEAARQRGNWKSIVVGGC 334
Query: 558 CEVTSYEIQQMRIMIDEFN 576
C+ + I+++R + ++
Sbjct: 335 CKASPEHIRRLRRTLQDYG 353
>gi|365764241|gb|EHN05765.1| Mht1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 324
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 141/341 (41%), Gaps = 40/341 (11%)
Query: 253 PTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP---------EACV 303
P + IV V +LDG +++ I P+WS+ T+E +
Sbjct: 5 PIKELIVEHPGKVLILDGGQGTELENRGINI--NSPVWSAAPFTSESFWEPSSRERKVVE 62
Query: 304 ETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHY--VDSMTEADLIAWHRPNVEALVRAG 361
E +RDF+ +I Y ++ + T +A ++ ++ +V
Sbjct: 63 EMYRDFMIAGANILMTI-----------TYQANFQSISENTSIKTLAAYKRFLDKIVSFT 111
Query: 362 VDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-A 420
+++ + I SIGP+ + EY+G Y D + +P +E +
Sbjct: 112 REFIGEERYLI-----GSIGPWAAHV--SCEYTGDYGPHPENIDYYGFFKPQLENFNQNR 164
Query: 421 GVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCL 477
+D + ETIP E A++ + + ++ S D++ G E IS +
Sbjct: 165 DIDLIGFETIPNFHELKAILSWDEDIISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLG 224
Query: 478 LANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW---LDTE 534
+ +GVNCV + + +++ + + P + +VYPN G +++ W +
Sbjct: 225 NKINKNLLLMGVNCVSFNQSALILKMLHEHLPGMPLLVYPNSGEIYNPKEKTWHRPTNKL 284
Query: 535 DEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEF 575
D++ V ++++ G IIGGCC + +I ++ +D++
Sbjct: 285 DDWETX--VKKFVDNGARIIGGCCRTSPKDIAEIASAVDKY 323
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 115/272 (42%), Gaps = 33/272 (12%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP---------EACVETHRDFIRAGA 56
KV +LDG +++ I P+WS+ T+E + E +RDF+ AGA
Sbjct: 16 KVLILDGGQGTELENRGINI--NSPVWSAAPFTSESFWEPSSRERKVVEEMYRDFMIAGA 73
Query: 57 DIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG 116
+I+ + YQAN ++ SE ++ L + ++ ++ + F +
Sbjct: 74 NILMTITYQANFQSI-----SENTSIKTLAAYKRFLDKI---------VSFTREF--IGE 117
Query: 117 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-AGVDYLALETIP 175
SIGP+ + EY+G Y D + +P +E + +D + ETIP
Sbjct: 118 ERYLIGSIGPWAAHV--SCEYTGDYGPHPENIDYYGFFKPQLENFNQNRDIDLIGFETIP 175
Query: 176 AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIG 232
E A++ + + ++ S D++ G E IS + + +G
Sbjct: 176 NFHELKAILSWDEDIISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLGNKINKNLLLMG 235
Query: 233 VNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
VNCV + + +++ + + P + +VYPN G
Sbjct: 236 VNCVSFNQSALILKMLHEHLPGMPLLVYPNSG 267
>gi|403214620|emb|CCK69121.1| hypothetical protein KNAG_0B06970 [Kazachstania naganishii CBS
8797]
Length = 332
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 7/191 (3%)
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV-RAGVDYLALETIPAEKEALA 438
IGP+G + +E++G Y + E D +++ +P ++ +D + ETIP E A
Sbjct: 126 IGPWGAHV--CAEFNGDYGPNPAEIDYLSYFKPQLDNFFHNDNLDLIGFETIPNIHELRA 183
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHGEL---ISSAVTSCLLANPDQIQAIGVNCVRPS 495
++ + ++ S ++ G ++ + S + +G+NCV S
Sbjct: 184 ILSWDETILSKPFYIGLSVHNNGLLRDGSTMKDVADLIKSFGGKLNKNLTLLGINCVSFS 243
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQWLEEGVNII 554
++ I + P + I YPN G V+D+V WL D V ++++ G I+
Sbjct: 244 DSPDILESIHKELPDMPLIAYPNSGEVYDTVKKIWLPNRDMVMTWEEVVDRYIKAGARIV 303
Query: 555 GGCCEVTSYEI 565
GGCC + +I
Sbjct: 304 GGCCRTSPKDI 314
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 114/275 (41%), Gaps = 38/275 (13%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRD----------FIRAG 55
KV +LDG +++ I +P+WS+V ++ +D F+ AG
Sbjct: 16 KVLVLDGGQGTELENRGINV--ANPVWSTVPFIDSSFWSNKSSKDRVIVKGMFDAFLDAG 73
Query: 56 ADIIQSSCYQANVDNLTKLGYSE--QEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNL 113
A+I+ ++ YQ + ++++ + +E LL + VQ ++ PD L
Sbjct: 74 AEILMTTTYQTSFKSVSENTPIQNLEEYSSLLDRIVQF-----SRDCIGPDKYL------ 122
Query: 114 LTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV-RAGVDYLALE 172
IGP+G + +E++G Y + E D +++ +P ++ +D + E
Sbjct: 123 -------IGCIGPWGAHV--CAEFNGDYGPNPAEIDYLSYFKPQLDNFFHNDNLDLIGFE 173
Query: 173 TIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGEL---ISSAVTSCLLANPDQIQ 229
TIP E A++ + ++ S ++ G ++ + S +
Sbjct: 174 TIPNIHELRAILSWDETILSKPFYIGLSVHNNGLLRDGSTMKDVADLIKSFGGKLNKNLT 233
Query: 230 AIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+G+NCV S ++ I + P + I YPN G
Sbjct: 234 LLGINCVSFSDSPDILESIHKELPDMPLIAYPNSG 268
>gi|405122623|gb|AFR97389.1| homocysteine S-methyltransferase [Cryptococcus neoformans var.
grubii H99]
Length = 381
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 119/292 (40%), Gaps = 66/292 (22%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTK-LGYSEQEALDLLHKSV 89
LW S L T P+ + H +++AGAD+++++ YQ NL L +EA +L V
Sbjct: 27 LWGSEALRTNPDVIRKVHEGYVQAGADLVETATYQLTPQNLCDHLHCPREEAERILCSGV 86
Query: 90 QL----MNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYV--- 142
+L + S N+ I + + + S GPYG+ L+ G EY G Y
Sbjct: 87 KLAASCITSCSSHNNEHNRIGRG------SNNSKIVLSFGPYGSTLQPGQEYDGIYPPPF 140
Query: 143 ---------------DSMTEADLIAWHR-PNVEALVR-----AGVDYLALETIPAEKE-- 179
D +A+H +EA+ R V+++A ETIP E
Sbjct: 141 GPSTSTNAFPPDSNDDEEAAIQALAYHHLDKLEAISRDEAAWRKVEWIAFETIPVLHEVR 200
Query: 180 ----ALALV--KLLREFPG---------QKAWLSFSCKDDTHT------SHGELISSAVT 218
A+A++ KL + G +K W++ H SH + V
Sbjct: 201 GIRRAMAILRRKLSALYSGGDNMNLWWEKKFWITSPFPMGQHPQLLPDGSHASV--PQVI 258
Query: 219 SCLLANPDQI-QAIGVNCVRPSHVSTLVRCIKQSHP-----TVQTIVYPNKG 264
L + PD I IG+NC PS++ +L P V+ ++YP+ G
Sbjct: 259 HALFSGPDPIPNGIGINCTNPSYLHSLTSSFASHLPFEFFGKVEMVMYPDGG 310
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 139/373 (37%), Gaps = 108/373 (28%)
Query: 289 LWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA 348
LW S L T P+ + H G+++ A D E + + + D +
Sbjct: 27 LWGSEALRTNPDVIRKVHE----GYVQAGA----------DLVETATYQLTPQNLCDHLH 72
Query: 349 WHRPNVEALVRAGVDYLA---------------LIKPSISSQTAASIGPYGTVLRDGSEY 393
R E ++ +GV A + + S +S+ S GPYG+ L+ G EY
Sbjct: 73 CPREEAERILCSGVKLAASCITSCSSHNNEHNRIGRGSNNSKIVLSFGPYGSTLQPGQEY 132
Query: 394 SGHYV------------------DSMTEADLIAWHR-PNVEALVR-----AGVDYLALET 429
G Y D +A+H +EA+ R V+++A ET
Sbjct: 133 DGIYPPPFGPSTSTNAFPPDSNDDEEAAIQALAYHHLDKLEAISRDEAAWRKVEWIAFET 192
Query: 430 IPAEKE------ALALV--KLLREFPG---------QKAWLSFSCKDDTHT------SHG 466
IP E A+A++ KL + G +K W++ H SH
Sbjct: 193 IPVLHEVRGIRRAMAILRRKLSALYSGGDNMNLWWEKKFWITSPFPMGQHPQLLPDGSHA 252
Query: 467 ELISSAVTSCLLANPDQI-QAIGVNCVRPSHVSTLVRCIKQSHP-----TVQTIVYPNKG 520
+ V L + PD I IG+NC PS++ +L P V+ ++YP+ G
Sbjct: 253 SV--PQVIHALFSGPDPIPNGIGINCTNPSYLHSLTSSFASHLPFEFFGKVEMVMYPDGG 310
Query: 521 GVWDSVHMKWLDTEDEYSILHYVPQWLE--------------------EGVNIIGGCCEV 560
V+D+ W+ T +W E +GV I GGCC+
Sbjct: 311 QVYDTTTRAWVITPQS---PENAEKWAEVVGDVAKKARGAEREGRGIWKGV-IAGGCCKS 366
Query: 561 TSYEIQQMRIMID 573
+ EI+ +R +D
Sbjct: 367 SFDEIRALRRFVD 379
>gi|349579670|dbj|GAA24831.1| K7_Mht1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 324
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 141/341 (41%), Gaps = 40/341 (11%)
Query: 253 PTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP---------EACV 303
P + IV V +LDG +++ I P+WS+ T+E +
Sbjct: 5 PIKELIVEHPGKVLILDGGQGTELENRGINI--NSPVWSAAPFTSESFWEPSSQERKVVE 62
Query: 304 ETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHY--VDSMTEADLIAWHRPNVEALVRAG 361
E +RDF+ +I Y ++ + T +A ++ ++ +V
Sbjct: 63 EMYRDFMIAGANILMTI-----------TYQANFQSISENTSIKTLAAYKRFLDKIVSFT 111
Query: 362 VDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-A 420
+++ + I SIGP+ + EY+G Y D + +P +E +
Sbjct: 112 REFIGEERYLI-----GSIGPWAAHV--SCEYTGDYGPHPENIDYYGFFKPQLENFNQNR 164
Query: 421 GVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCL 477
+D + ETIP E A++ + + ++ S D++ G E IS +
Sbjct: 165 DIDLIGFETIPNFHELKAILSWDEDIISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLG 224
Query: 478 LANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW---LDTE 534
+ +GVNCV + + +++ + + P + +VYPN G +++ W +
Sbjct: 225 NKINKNLLLMGVNCVSFNQSALILKMLHEHLPGMPLLVYPNSGEIYNPKEKTWHRQTNKL 284
Query: 535 DEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEF 575
D++ V ++++ G IIGGCC + +I ++ +D++
Sbjct: 285 DDWETT--VKKFVDNGARIIGGCCRTSPKDIAEIASAVDKY 323
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 115/272 (42%), Gaps = 33/272 (12%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP---------EACVETHRDFIRAGA 56
KV +LDG +++ I P+WS+ T+E + E +RDF+ AGA
Sbjct: 16 KVLILDGGQGTELENRGINI--NSPVWSAAPFTSESFWEPSSQERKVVEEMYRDFMIAGA 73
Query: 57 DIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG 116
+I+ + YQAN ++ SE ++ L + ++ ++ + F +
Sbjct: 74 NILMTITYQANFQSI-----SENTSIKTLAAYKRFLDKI---------VSFTREF--IGE 117
Query: 117 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-AGVDYLALETIP 175
SIGP+ + EY+G Y D + +P +E + +D + ETIP
Sbjct: 118 ERYLIGSIGPWAAHV--SCEYTGDYGPHPENIDYYGFFKPQLENFNQNRDIDLIGFETIP 175
Query: 176 AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIG 232
E A++ + + ++ S D++ G E IS + + +G
Sbjct: 176 NFHELKAILSWDEDIISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLGNKINKNLLLMG 235
Query: 233 VNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
VNCV + + +++ + + P + +VYPN G
Sbjct: 236 VNCVSFNQSALILKMLHEHLPGMPLLVYPNSG 267
>gi|340516537|gb|EGR46785.1| S-methylmethionine-dependent Homocysteine/selenocysteine
methylase-like protein [Trichoderma reesei QM6a]
Length = 354
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 101/234 (43%), Gaps = 28/234 (11%)
Query: 37 LTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEA--------LDLLHKS 88
L ++PE + + F D++ ++ YQ ++D + ++ A LL K+
Sbjct: 33 LVSDPETLLLCQKSFAEIPVDVLLTATYQVSIDGFARTKTAQHPAGIADVSHIPPLLEKA 92
Query: 89 VQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHY-VDSMTE 147
+Q+ + A N + A S+GPYG + EYSG Y ++
Sbjct: 93 IQIAHEAAAAAAAATTTNGPPPPHPCA----VALSLGPYGACMIPSQEYSGAYDAQHDSQ 148
Query: 148 ADLIAWHRPNVEAL-----VRAGVDYLALETIPAEKEALALVKLLREFP----GQKAWLS 198
L WHR +E +R + Y+ALETIP E +AL + + P G W+S
Sbjct: 149 EALYLWHRQRMELFARVPDIRHSITYMALETIPRLDEIVALRRAVAAVPALSSGIPFWMS 208
Query: 199 --FSCKDDTHTSHG---ELISSAVTSCLLANPDQIQ-AIGVNCVRPSHVSTLVR 246
F ++D T G E I A+ LA + A+G+NC + + +L+R
Sbjct: 209 CLFPNEEDETTPDGSSPEAIIRAMLDPALAETAAVPWAVGINCTKVWKLDSLLR 262
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 109/242 (45%), Gaps = 43/242 (17%)
Query: 370 PSISSQTAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEAL-----VRAGVD 423
P A S+GPYG + EYSG Y ++ L WHR +E +R +
Sbjct: 114 PPHPCAVALSLGPYGACMIPSQEYSGAYDAQHDSQEALYLWHRQRMELFARVPDIRHSIT 173
Query: 424 YLALETIPAEKEALALVKLLREFP----GQKAWLS--FSCKDDTHTSHG---ELISSAVT 474
Y+ALETIP E +AL + + P G W+S F ++D T G E I A+
Sbjct: 174 YMALETIPRLDEIVALRRAVAAVPALSSGIPFWMSCLFPNEEDETTPDGSSPEAIIRAML 233
Query: 475 SCLLANPDQIQ-AIGVNCVRPSHVSTLVRCIKQS------HPTVQT----IVYPN--KGG 521
LA + A+G+NC + + +L+R + + T++ ++YP+ G
Sbjct: 234 DPALAETAAVPWAVGINCTKVWKLDSLLRRYEAAIRDLLHEGTIKKWPALVLYPDGTNGE 293
Query: 522 VWDSVHMKW---LDTEDEYSILHYVPQWLEEGVN-----------IIGGCCEVTSYEIQQ 567
V+++ +W +E ++ + + Q L++ V I+GGCC +I++
Sbjct: 294 VYNTTTQQWEIPQGSEQQHDRVPWEAQ-LKQVVRATEARGDWPEIIVGGCCRALPSDIKR 352
Query: 568 MR 569
+R
Sbjct: 353 LR 354
>gi|401841116|gb|EJT43639.1| hypothetical protein SKUD_132402 [Saccharomyces kudriavzevii IFO
1802]
Length = 261
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 9/202 (4%)
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEALA 438
IGP+G + E++G Y D + +P ++ ++ +D + ETIP E A
Sbjct: 62 IGPWGAHI--CCEFTGDYGPDPQSIDFYKYFKPQLDNFNKSDKLDLIGFETIPNVHELRA 119
Query: 439 LVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQA----IGVNCVRP 494
++ + ++ S + G + V + D+I +G+NCV
Sbjct: 120 ILSWDESILSKPFYIGLSVHEHGVLRDGTTMEE-VAKVIKGLGDKINPNFSLLGINCVSF 178
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNI 553
+ ++ + Q P + + YPN G V+D+ WL D+ S V Q++ G I
Sbjct: 179 NQSPDILESLHQVLPNMALLAYPNSGEVYDTEKKIWLPNSDKLNSWDAVVKQYIGSGARI 238
Query: 554 IGGCCEVTSYEIQQMRIMIDEF 575
IGGCC + +IQ++ + ++
Sbjct: 239 IGGCCRTSPNDIQEISTAVKKY 260
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 92/232 (39%), Gaps = 46/232 (19%)
Query: 49 RDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLN 108
DF+ AGA+I+ ++ YQ + +KSV EN TP L+
Sbjct: 3 NDFLNAGAEILMTTTYQTS------------------YKSVS--------EN-TPIKTLS 35
Query: 109 KTFNLLTGHIETA-----------ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPN 157
+ NLLT ++ + IGP+G + E++G Y D + +P
Sbjct: 36 EYNNLLTRIVDFSRVCIGEDKYLIGCIGPWGAHI--CCEFTGDYGPDPQSIDFYKYFKPQ 93
Query: 158 VEALVRAG-VDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSA 216
++ ++ +D + ETIP E A++ + ++ S + G +
Sbjct: 94 LDNFNKSDKLDLIGFETIPNVHELRAILSWDESILSKPFYIGLSVHEHGVLRDGTTMEE- 152
Query: 217 VTSCLLANPDQIQA----IGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
V + D+I +G+NCV + ++ + Q P + + YPN G
Sbjct: 153 VAKVIKGLGDKINPNFSLLGINCVSFNQSPDILESLHQVLPNMALLAYPNSG 204
>gi|6322966|ref|NP_013038.1| Mht1p [Saccharomyces cerevisiae S288c]
gi|74583856|sp|Q12525.1|MHT1_YEAST RecName: Full=Homocysteine S-methyltransferase 1; AltName:
Full=S-methylmethionine:homocysteine methyltransferase
1; Short=SMM:Hcy S-methyltransferase 1
gi|642322|emb|CAA87995.1| ORF L0552 [Saccharomyces cerevisiae]
gi|1360274|emb|CAA97515.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45270278|gb|AAS56520.1| YLL062C [Saccharomyces cerevisiae]
gi|190405993|gb|EDV09260.1| S-Methylmethionine Homocysteine methylTransferase [Saccharomyces
cerevisiae RM11-1a]
gi|207343298|gb|EDZ70799.1| YLL062Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272706|gb|EEU07680.1| Mht1p [Saccharomyces cerevisiae JAY291]
gi|259147932|emb|CAY81181.1| Mht1p [Saccharomyces cerevisiae EC1118]
gi|285813367|tpg|DAA09263.1| TPA: Mht1p [Saccharomyces cerevisiae S288c]
gi|323303914|gb|EGA57694.1| Mht1p [Saccharomyces cerevisiae FostersB]
gi|323308161|gb|EGA61411.1| Mht1p [Saccharomyces cerevisiae FostersO]
gi|323332578|gb|EGA73985.1| Mht1p [Saccharomyces cerevisiae AWRI796]
gi|323347572|gb|EGA81839.1| Mht1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 324
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 141/341 (41%), Gaps = 40/341 (11%)
Query: 253 PTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP---------EACV 303
P + IV V +LDG +++ I P+WS+ T+E +
Sbjct: 5 PIKELIVEHPGKVLILDGGQGTELENRGINI--NSPVWSAAPFTSESFWEPSSQERKVVE 62
Query: 304 ETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHY--VDSMTEADLIAWHRPNVEALVRAG 361
E +RDF+ +I Y ++ + T +A ++ ++ +V
Sbjct: 63 EMYRDFMIAGANILMTI-----------TYQANFQSISENTSIKTLAAYKRFLDKIVSFT 111
Query: 362 VDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-A 420
+++ + I SIGP+ + EY+G Y D + +P +E +
Sbjct: 112 REFIGEERYLI-----GSIGPWAAHV--SCEYTGDYGPHPENIDYYGFFKPQLENFNQNR 164
Query: 421 GVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCL 477
+D + ETIP E A++ + + ++ S D++ G E IS +
Sbjct: 165 DIDLIGFETIPNFHELKAILSWDEDIISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLG 224
Query: 478 LANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW---LDTE 534
+ +GVNCV + + +++ + + P + +VYPN G +++ W +
Sbjct: 225 NKINKNLLLMGVNCVSFNQSALILKMLHEHLPGMPLLVYPNSGEIYNPKEKTWHRPTNKL 284
Query: 535 DEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEF 575
D++ V ++++ G IIGGCC + +I ++ +D++
Sbjct: 285 DDWETT--VKKFVDNGARIIGGCCRTSPKDIAEIASAVDKY 323
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 115/272 (42%), Gaps = 33/272 (12%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP---------EACVETHRDFIRAGA 56
KV +LDG +++ I P+WS+ T+E + E +RDF+ AGA
Sbjct: 16 KVLILDGGQGTELENRGINI--NSPVWSAAPFTSESFWEPSSQERKVVEEMYRDFMIAGA 73
Query: 57 DIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG 116
+I+ + YQAN ++ SE ++ L + ++ ++ + F +
Sbjct: 74 NILMTITYQANFQSI-----SENTSIKTLAAYKRFLDKI---------VSFTREF--IGE 117
Query: 117 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-AGVDYLALETIP 175
SIGP+ + EY+G Y D + +P +E + +D + ETIP
Sbjct: 118 ERYLIGSIGPWAAHV--SCEYTGDYGPHPENIDYYGFFKPQLENFNQNRDIDLIGFETIP 175
Query: 176 AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIG 232
E A++ + + ++ S D++ G E IS + + +G
Sbjct: 176 NFHELKAILSWDEDIISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLGNKINKNLLLMG 235
Query: 233 VNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
VNCV + + +++ + + P + +VYPN G
Sbjct: 236 VNCVSFNQSALILKMLHEHLPGMPLLVYPNSG 267
>gi|151941112|gb|EDN59490.1| S-Methylmethionine Homocysteine methylTransferase [Saccharomyces
cerevisiae YJM789]
gi|323354004|gb|EGA85856.1| Mht1p [Saccharomyces cerevisiae VL3]
Length = 324
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 141/336 (41%), Gaps = 41/336 (12%)
Query: 258 IVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP---------EACVETHRD 308
I +P K V +LDG +++ I P+WS+ T+E + E +RD
Sbjct: 11 IEHPGK-VLILDGGQGTELENRGINI--NSPVWSAAPFTSESFWEPSSQERKVVEEMYRD 67
Query: 309 FIRGHIETAASIGPYGTVLRDGSEYSGHY--VDSMTEADLIAWHRPNVEALVRAGVDYLA 366
F+ +I Y ++ + T +A ++ ++ +V +++
Sbjct: 68 FMIAGANILMTI-----------TYQANFQSISENTSIKTLAAYKRFLDKIVSFTREFIG 116
Query: 367 LIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-AGVDYL 425
+ I SIGP+ + EY+G Y D + +P +E + +D +
Sbjct: 117 EERYLI-----GSIGPWAAHV--SCEYTGDYGPHPENIDYYGFFKPQLENFNQNRDIDLI 169
Query: 426 ALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPD 482
ETIP E A++ + + ++ S D++ G E IS +
Sbjct: 170 GFETIPNFHELKAILSWDEDIISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLGNKINK 229
Query: 483 QIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW---LDTEDEYSI 539
+ +GVNCV + + +++ + + P + +VYPN G +++ W + D++
Sbjct: 230 NLLLMGVNCVSFNQSALILKMLHEHLPGMPLLVYPNSGEIYNPKEKTWHRPTNKLDDWET 289
Query: 540 LHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEF 575
V ++++ G IIGGCC + +I ++ +D++
Sbjct: 290 T--VKKFVDNGARIIGGCCRTSPKDIAEIASAVDKY 323
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 115/272 (42%), Gaps = 33/272 (12%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP---------EACVETHRDFIRAGA 56
KV +LDG +++ I P+WS+ T+E + E +RDF+ AGA
Sbjct: 16 KVLILDGGQGTELENRGINI--NSPVWSAAPFTSESFWEPSSQERKVVEEMYRDFMIAGA 73
Query: 57 DIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG 116
+I+ + YQAN ++ SE ++ L + ++ ++ + F +
Sbjct: 74 NILMTITYQANFQSI-----SENTSIKTLAAYKRFLDKI---------VSFTREF--IGE 117
Query: 117 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-AGVDYLALETIP 175
SIGP+ + EY+G Y D + +P +E + +D + ETIP
Sbjct: 118 ERYLIGSIGPWAAHV--SCEYTGDYGPHPENIDYYGFFKPQLENFNQNRDIDLIGFETIP 175
Query: 176 AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIG 232
E A++ + + ++ S D++ G E IS + + +G
Sbjct: 176 NFHELKAILSWDEDIISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLGNKINKNLLLMG 235
Query: 233 VNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
VNCV + + +++ + + P + +VYPN G
Sbjct: 236 VNCVSFNQSALILKMLHEHLPGMPLLVYPNSG 267
>gi|256752403|ref|ZP_05493263.1| homocysteine S-methyltransferase [Thermoanaerobacter ethanolicus
CCSD1]
gi|256748738|gb|EEU61782.1| homocysteine S-methyltransferase [Thermoanaerobacter ethanolicus
CCSD1]
Length = 807
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 120/269 (44%), Gaps = 40/269 (14%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V + DG+ +Q+ +K + P + ++ T PE + HR +I AGAD+I+++ +
Sbjct: 11 RVIVFDGAMGTQLQDRGLKTGE-CPEYMNI---THPEVVFDIHRSYIEAGADVIETNTFG 66
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSA-KDKENQTPDINLNKTFNLLTGHIETAASI 124
AN L K G E E +++ ++V++ A KDK A SI
Sbjct: 67 ANRIKLAKYGL-ENEVFNIVTQAVKIAKKASKDK--------------------PVALSI 105
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GP G +L Y D MT + + V A RAG D + +ET+ EA A +
Sbjct: 106 GPIGELLT-------PYGD-MTFDEAYDVFKEVVIAAERAGADIVLIETMSDMLEAKAAI 157
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVST 243
+E K + + ++D T G S +T + + AIGVNC P + +
Sbjct: 158 LAAKENSSMKVICTMTFQEDGRTLMG---SDPITVVVSLQGLGLDAIGVNCSTGPDKMVS 214
Query: 244 LVRCIKQSHPTVQTIVYPNKGVKLL-DGS 271
+V + Q + I PN G+ ++ DG
Sbjct: 215 VVEKMSQVS-RIPIIAQPNAGMPVIRDGK 242
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 18/204 (8%)
Query: 369 KPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE 428
K S A SIGP G +L Y D MT + + V A RAG D + +E
Sbjct: 94 KASKDKPVALSIGPIGELLT-------PYGD-MTFDEAYDVFKEVVIAAERAGADIVLIE 145
Query: 429 TIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIG 488
T+ EA A + +E K + + ++D T G S +T + + AIG
Sbjct: 146 TMSDMLEAKAAILAAKENSSMKVICTMTFQEDGRTLMG---SDPITVVVSLQGLGLDAIG 202
Query: 489 VNC-VRPSHVSTLVRCIKQSHPTVQTIVYPNKGG--VWDSVHMKWLDTEDEYSILHYVPQ 545
VNC P + ++V + Q + I PN G + D + L E+ S + P
Sbjct: 203 VNCSTGPDKMVSVVEKMSQVS-RIPIIAQPNAGMPVIRDGKTVYDLKPEEFAS---FFPS 258
Query: 546 WLEEGVNIIGGCCEVTSYEIQQMR 569
+E+G +I+GGCC T + I+ ++
Sbjct: 259 LVEKGASIVGGCCGTTPHYIRLVK 282
>gi|358054030|dbj|GAA99829.1| hypothetical protein E5Q_06532 [Mixia osmundae IAM 14324]
Length = 352
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 120/302 (39%), Gaps = 71/302 (23%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP--EACVETHRDFIRAGADIIQSSCYQA 66
LLDG ++ + D HPLWSS L+ + + H+ F AG+DIIQ++ YQ
Sbjct: 17 LLDGGMSTTLEDELGASTD-HPLWSSHLLSDAKGRQQIQKVHQMFHDAGSDIIQTNTYQM 75
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ G S A +L+ ++ L S K G A S+GP
Sbjct: 76 DESLCEANGLS---ATELVSNAIALARSVK-------------------GSPLVALSLGP 113
Query: 127 YGTVLRDGSEYSGHY---------------VDSMT-----------EADLIAWHRPNVEA 160
YG + GSEYSGHY VD + E L +H +
Sbjct: 114 YGALTSPGSEYSGHYTGPYGPFESSLPDSRVDPSSTLPPASDAECYEDALTDFHTKRLRT 173
Query: 161 -LVRAGVDYLALETIPAEKEALALVKLLR----EFPGQKAWLSFS-----CKDDTHTS-- 208
L D LA ET+P E A+ + +R E P W+SF C TH +
Sbjct: 174 FLASEKPDLLAFETVPLLTEVRAIRRAVRLCQTELP---YWISFVLPDGICPQSTHPTID 230
Query: 209 HGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST----LVRCIKQSHPTVQTIV-YPNK 263
A+T L AIG+NC PS +++ + R + ++ +V YP+
Sbjct: 231 AKRCTLEALTLAALQGEQPPVAIGINCTHPSLIASNVIRMARTVSSHKLSIPWLVLYPDG 290
Query: 264 GV 265
G+
Sbjct: 291 GL 292
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 113/285 (39%), Gaps = 62/285 (21%)
Query: 310 IRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIK 369
++G A S+GPYG + GSEYSGHY + P +L + VD + +
Sbjct: 101 VKGSPLVALSLGPYGALTSPGSEYSGHYTGP---------YGPFESSLPDSRVDPSSTLP 151
Query: 370 PSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA-LVRAGVDYLALE 428
P+ ++ Y D++T+ +H + L D LA E
Sbjct: 152 PASDAEC--------------------YEDALTD-----FHTKRLRTFLASEKPDLLAFE 186
Query: 429 TIPAEKEALALVKLLR----EFPGQKAWLSFS-----CKDDTHTS--HGELISSAVTSCL 477
T+P E A+ + +R E P W+SF C TH + A+T
Sbjct: 187 TVPLLTEVRAIRRAVRLCQTELP---YWISFVLPDGICPQSTHPTIDAKRCTLEALTLAA 243
Query: 478 LANPDQIQAIGVNCVRPSHVST----LVRCIKQSHPTVQTIV-YPNKGGVWDSVHMKWLD 532
L AIG+NC PS +++ + R + ++ +V YP+ G +D+V W
Sbjct: 244 LQGEQPPVAIGINCTHPSLIASNVIRMARTVSSHKLSIPWLVLYPDGGLTYDTVTKSWHA 303
Query: 533 TEDEYSILHYVPQWLEEGVN--------IIGGCCEVTSYEIQQMR 569
E + S + L+ I+GGCC+ T I +R
Sbjct: 304 REAQQSDRSWADALLDAASTGDRAFAGYILGGCCKSTPSYIAALR 348
>gi|363752483|ref|XP_003646458.1| hypothetical protein Ecym_4612 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890093|gb|AET39641.1| hypothetical protein Ecym_4612 [Eremothecium cymbalariae
DBVPG#7215]
Length = 326
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 15/195 (7%)
Query: 391 SEYSGHYVDSMTEADLIAWHRPNVEAL-VRAGVDYLALETIPAEKEALALVKLLREFPGQ 449
+E+SG Y + + + RP + ++ +D + ETIP E A++ +
Sbjct: 135 AEFSGDYGEHPERIPYLDYFRPQLNNFNLQEDIDVIGFETIPNIHELTAILSWDESIIKK 194
Query: 450 KAWLSFSC------KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
++ S +D T S + ++ L NP+ + A+G+NC + ++
Sbjct: 195 PFYIGMSVHEHGTLRDGTTMSQVAQLFRSLGKKL--NPNFL-ALGINCCSFRYSHMILES 251
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHY---VPQWLEEGVNIIGGCCEV 560
+ + P + I YPN G ++D+V WL E+ I+ + V +L+ G IIGGCC
Sbjct: 252 LHEELPYIPLIAYPNSGELYDTVKKIWLKNEN--CIVTWDEIVKSYLQSGARIIGGCCRT 309
Query: 561 TSYEIQQMRIMIDEF 575
T +I+Q+ + ++
Sbjct: 310 TPNDIRQIVTAVKKY 324
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 66/336 (19%), Positives = 138/336 (41%), Gaps = 70/336 (20%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRD----------FIRAG 55
++ ++DG +++ I + P+WS++ + + RD +I AG
Sbjct: 16 QILIMDGGQGTELENRGINVAN--PVWSTIPFINDSFWSDRSSRDRQIVAGMFEEYIAAG 73
Query: 56 ADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTF---- 111
A+++ + YQ++ ++ SE + L + QL++ + ++T
Sbjct: 74 ANLLMTITYQSSFKSV-----SENTDIKTLEEYNQLLDRI---------VAFSRTCIGAD 119
Query: 112 NLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL-VRAGVDYLA 170
N L G IG +G + +E+SG Y + + + RP + ++ +D +
Sbjct: 120 NYLVG------CIGSWGAHI--CAEFSGDYGEHPERIPYLDYFRPQLNNFNLQEDIDVIG 171
Query: 171 LETIPAEKEALALVKLLREFPGQKAWLSFSC------KDDTHTSHGELISSAVTSCLLAN 224
ETIP E A++ + ++ S +D T S + ++ L N
Sbjct: 172 FETIPNIHELTAILSWDESIIKKPFYIGMSVHEHGTLRDGTTMSQVAQLFRSLGKKL--N 229
Query: 225 PDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDV 284
P+ + A+G+NC + ++ + + P + I YPN G +L D T+K +
Sbjct: 230 PNFL-ALGINCCSFRYSHMILESLHEELPYIPLIAYPNSG-ELYD----------TVKKI 277
Query: 285 DGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASI 320
W + E C+ T + ++ ++++ A I
Sbjct: 278 -----W------LKNENCIVTWDEIVKSYLQSGARI 302
>gi|359408022|ref|ZP_09200494.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356676779|gb|EHI49128.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 302
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 101/243 (41%), Gaps = 36/243 (14%)
Query: 4 ICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+ + LDG ++ HPLWS + EPE HRDFI AGA +I ++
Sbjct: 1 MADLSFLDGGLGQEIQNRA--SAQPHPLWSVKVMYDEPELVSAVHRDFITAGARVITANT 58
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
Y A+ L + G Q A D+ + ++ L + DK PD+ L L G
Sbjct: 59 YTASPPRLRRDGDLRQIA-DIHNTALALARAEMDKAGD-PDLQLAGCLPPLVGSYV---- 112
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+E S + DS+T+ +R + AL VD +ETI EA A
Sbjct: 113 -----------AEVSMDFGDSLTD------YR-QLVALQSGKVDLFLIETISNIAEAKAA 154
Query: 184 VKLLRE--FPGQKAWLSFSCKDD--THTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 239
+ ++E PG ++ + DD GE +S A+ L PD + VNC P
Sbjct: 155 LTAVKEADMPG---FVGLTICDDHSNRLRSGEALSDALDQLLPLGPDGLM---VNCSLPE 208
Query: 240 HVS 242
VS
Sbjct: 209 AVS 211
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 123/319 (38%), Gaps = 51/319 (15%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LDG ++ HPLWS + EPE HRDFI G
Sbjct: 4 LSFLDGGLGQEIQNRA--SAQPHPLWSVKVMYDEPELVSAVHRDFITA-----------G 50
Query: 325 TVLRDGSEYSGHYVDSMTEADL--IAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
+ + Y+ + DL IA AL RA +D P + Q A + P
Sbjct: 51 ARVITANTYTASPPRLRRDGDLRQIADIHNTALALARAEMDKAG--DPDL--QLAGCLPP 106
Query: 383 Y-GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
G+ + +E S + DS+T+ +R + AL VD +ETI EA A +
Sbjct: 107 LVGSYV---AEVSMDFGDSLTD------YR-QLVALQSGKVDLFLIETISNIAEAKAALT 156
Query: 442 LLRE--FPGQKAWLSFSCKDD--THTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
++E PG ++ + DD GE +S A+ L PD + VNC P V
Sbjct: 157 AVKEADMPG---FVGLTICDDHSNRLRSGEALSDALDQLLPLGPDGLM---VNCSLPEAV 210
Query: 498 STLVRCIKQSHPT--------VQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEE 549
S + + P +I GG S+ + + Y+ + W+E
Sbjct: 211 SKAMSVLA-GLPIPFGGYANGFTSIDALKPGGTVASLSARTDLGPEAYA--DFACSWVEA 267
Query: 550 GVNIIGGCCEVTSYEIQQM 568
G IIGGCCEV I +
Sbjct: 268 GATIIGGCCEVGPAHIAHL 286
>gi|358449357|ref|ZP_09159843.1| homocysteine S-methyltransferase [Marinobacter manganoxydans
MnI7-9]
gi|357226379|gb|EHJ04858.1| homocysteine S-methyltransferase [Marinobacter manganoxydans
MnI7-9]
Length = 301
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 128/328 (39%), Gaps = 52/328 (15%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
K V LLDG ++ R + LWS + +P+ + H DFIR T
Sbjct: 2 KSVALLDGGLGQEIYRRAMNVT--SLLWSVAVMREQPDVVTDVHADFIRAGARTLTLNTY 59
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
T R E G + ++ + R AL A VD + P + S
Sbjct: 60 AATPTRLAREGLGDEIGAIHQRAFEVLER--AIALTGADVDIAGCLPPLVGSYR------ 111
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
S+ + D +E D++ +++G D +ET+ EA A
Sbjct: 112 --------SQPDRTFEDLKSEFDILVK--------LQSGADVFLIETMTNSLEAKAACAA 155
Query: 443 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
E G+ ++F + D GE ++ AV + + P AI +NC P +S
Sbjct: 156 ANE-SGKPFGVAFRLEADGKLRSGETLAEAVEAVRASGP---TAIMLNCCDPEVIS---- 207
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVH----------MKWLDTEDEYSILHY---VPQWLEE 549
Q+ P + + YP GG ++ + L+ + S Y V QWL++
Sbjct: 208 ---QAMPELAGL-YPCTGGYANAFKTVEPMAGGALVDELEARQDVSPGVYGLQVKQWLDD 263
Query: 550 GVNIIGGCCEVTSYEIQQMR-IMIDEFN 576
G ++GGCCE+T I + ++ E+N
Sbjct: 264 GAGVVGGCCEITPEHISHLADVLTGEYN 291
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 103/264 (39%), Gaps = 52/264 (19%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V LLDG ++ R + LWS + +P+ + H DFIRAGA + + Y A
Sbjct: 4 VALLDGGLGQEIYRRAMNVT--SLLWSVAVMREQPDVVTDVHADFIRAGARTLTLNTYAA 61
Query: 67 NVDNLTKLGYSE------QEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIET 120
L + G + Q A ++L +++ L + D P +
Sbjct: 62 TPTRLAREGLGDEIGAIHQRAFEVLERAIALTGADVDIAGCLPPL--------------- 106
Query: 121 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 180
+G Y S+ + D +E D++ +++G D +ET+ EA
Sbjct: 107 ---VGSY------RSQPDRTFEDLKSEFDILVK--------LQSGADVFLIETMTNSLEA 149
Query: 181 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 240
A E G+ ++F + D GE ++ AV + + P AI +NC P
Sbjct: 150 KAACAAANE-SGKPFGVAFRLEADGKLRSGETLAEAVEAVRASGP---TAIMLNCCDPEV 205
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKG 264
+S Q+ P + + YP G
Sbjct: 206 IS-------QAMPELAGL-YPCTG 221
>gi|354565463|ref|ZP_08984638.1| methionine synthase [Fischerella sp. JSC-11]
gi|353549422|gb|EHC18864.1| methionine synthase [Fischerella sp. JSC-11]
Length = 1179
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 140/343 (40%), Gaps = 44/343 (12%)
Query: 251 SHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD-GHPLWSSV--YLT-TEPEACVETH 306
+HP ++ + P + V + DG+ + + R + D G P + YL T+PEA + H
Sbjct: 2 THPFLERLHSPERPVIVFDGAMGTNLQRQNLVAEDFGGPEYEGCNEYLVHTKPEAVAKVH 61
Query: 307 RDFIRGH---IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 363
RDF+ IET + G VL + Y + T A L R +
Sbjct: 62 RDFLAAGADVIETD-TFGGTSIVLAEYGLADKAYYLNKTAAQLAK----------RVAAE 110
Query: 364 YLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 423
+ KP A S+GP + G ++D T D A EAL GVD
Sbjct: 111 FSTPEKPRF---VAGSMGPTTKLPTLG------HIDFDTMKDAFAQQ---AEALWDGGVD 158
Query: 424 YLALET---IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-LA 479
+ET + K AL ++ + G + L S +T + L+ + + + L +
Sbjct: 159 LFIVETCQDVLQIKAALNGIEEVFAKKGDRRPLMVSVTMETMGTM--LVGTEINAVLTIL 216
Query: 480 NPDQIQAIGVNCVR-PSHVSTLVRCIKQSHPTVQTIVYPNKG---GVWDSVHMKWLDTED 535
P I +G+NC P + ++ + + P V + + PN G V H + E
Sbjct: 217 EPYPIDILGLNCATGPDLMKPHIKYLSEHSPFVVSCI-PNAGLPENVGGKAHYRLTPMEL 275
Query: 536 EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEFNTK 578
S++H+V GV +IGGCC IQQ+ + E K
Sbjct: 276 RMSLMHFVEDL---GVQVIGGCCGTRPEHIQQLAEIAKELKPK 315
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 115/268 (42%), Gaps = 34/268 (12%)
Query: 7 VKLLDGSFTSQVSRHTIKDVD-GHPLWSSV--YLT-TEPEACVETHRDFIRAGADIIQSS 62
V + DG+ + + R + D G P + YL T+PEA + HRDF+ AGAD+I++
Sbjct: 16 VIVFDGAMGTNLQRQNLVAEDFGGPEYEGCNEYLVHTKPEAVAKVHRDFLAAGADVIETD 75
Query: 63 CYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAA 122
+ L + G +++ L+K+ + E TP+ F A
Sbjct: 76 TFGGTSIVLAEYGLADKAY--YLNKTAAQLAKRVAAEFSTPE---KPRF--------VAG 122
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET---IPAEKE 179
S+GP + G ++D T D A EAL GVD +ET + K
Sbjct: 123 SMGPTTKLPTLG------HIDFDTMKDAFAQQ---AEALWDGGVDLFIVETCQDVLQIKA 173
Query: 180 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-LANPDQIQAIGVNCVR- 237
AL ++ + G + L S +T + L+ + + + L + P I +G+NC
Sbjct: 174 ALNGIEEVFAKKGDRRPLMVSVTMETMGTM--LVGTEINAVLTILEPYPIDILGLNCATG 231
Query: 238 PSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
P + ++ + + P V + + PN G+
Sbjct: 232 PDLMKPHIKYLSEHSPFVVSCI-PNAGL 258
>gi|67525841|ref|XP_660982.1| hypothetical protein AN3378.2 [Aspergillus nidulans FGSC A4]
gi|40744166|gb|EAA63346.1| hypothetical protein AN3378.2 [Aspergillus nidulans FGSC A4]
gi|259485636|tpe|CBF82826.1| TPA: homocysteine S-methyltransferase (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 355
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 110/267 (41%), Gaps = 38/267 (14%)
Query: 6 KVKLLDGSFTSQVSRH--TIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
K+ LLDG + + + I PLWSS L + P HR F AGADI+ ++
Sbjct: 2 KILLLDGGLGTTLESYPFNITFTSETPLWSSHLLISSPSTLQSAHRAFYDAGADILLTAT 61
Query: 64 YQANVDNLTKLGYSE--QEALDLLHKSVQLMNSA-KDKENQTPDINLNKTFNLLTGHIET 120
YQ++++ + S +A D + ++ L+ A Q P
Sbjct: 62 YQSSIEGFARTDASHTINDAGDYMRSAIPLVRGAIPSSARQRPQ------------QCRV 109
Query: 121 AASIGPYGTVLRD-GSEYSGHYVDSMTEAD-LIAWHRPNVEALVR-----AGVDYLALET 173
A S+GPYG + +EY+G Y M D L WH + V VD++A ET
Sbjct: 110 ALSLGPYGATMSPVAAEYTGAYPPEMDGEDALRQWHAGRLNVFVDDRESWDQVDFVAFET 169
Query: 174 IPAEKEALALVKLLREF-------PGQKAWL---SFSCKDDTHTSHGELISSAV-TSCLL 222
+ E A+ +++ +K W F ++ T + + +AV L
Sbjct: 170 LIRADEVCAVRGAMKDVCVGPEIHRRRKPWWICGVFPAEEVDRTQVRQWVDAAVGQRPGL 229
Query: 223 ANPDQIQAIGVNCVRPSHVSTLVRCIK 249
P IG+NC R +V+ +V ++
Sbjct: 230 PRP---WGIGLNCTRIENVAKIVAIMR 253
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 137/360 (38%), Gaps = 62/360 (17%)
Query: 265 VKLLDGSFTSQVSRH--TIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
+ LLDG + + + I PLWSS L + P HR F + +
Sbjct: 3 ILLLDGGLGTTLESYPFNITFTSETPLWSSHLLISSPSTLQSAHRAFYDAGADILLTATY 62
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
++ + H ++ + + + LVR + A +P + A S+GP
Sbjct: 63 QSSIEGFARTDASHTINDAGD------YMRSAIPLVRGAIPSSARQRPQ-QCRVALSLGP 115
Query: 383 YGTVLRD-GSEYSGHYVDSMTEAD-LIAWHRPNVEALVR-----AGVDYLALETIPAEKE 435
YG + +EY+G Y M D L WH + V VD++A ET+ E
Sbjct: 116 YGATMSPVAAEYTGAYPPEMDGEDALRQWHAGRLNVFVDDRESWDQVDFVAFETLIRADE 175
Query: 436 ALALVKLLREF-------PGQKAWL---SFSCKDDTHTSHGELISSAV-TSCLLANPDQI 484
A+ +++ +K W F ++ T + + +AV L P
Sbjct: 176 VCAVRGAMKDVCVGPEIHRRRKPWWICGVFPAEEVDRTQVRQWVDAAVGQRPGLPRP--- 232
Query: 485 QAIGVNCVRPSHVSTLVRCIKQSHPTVQT--------------------IVYPN--KGGV 522
IG+NC R +V+ +V ++ + + ++YP+ KG
Sbjct: 233 WGIGLNCTRIENVAKIVAIMRDELHCLLSRGKEDGFVDEWDAASGKPWLVLYPDGTKGEK 292
Query: 523 WDSVHMKWLDTE-------DE--YSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMID 573
+D V W+ E DE + ++ + EG+ I+GGCC +I +R ID
Sbjct: 293 YDPVTKTWVARETVVRCPWDESLWDVVQGQSEGDWEGI-IVGGCCRAGPADIAALRRRID 351
>gi|374620011|ref|ZP_09692545.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [gamma proteobacterium
HIMB55]
gi|374303238|gb|EHQ57422.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [gamma proteobacterium
HIMB55]
Length = 311
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 133/327 (40%), Gaps = 54/327 (16%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG ++ + + HPLWS+ + EP + HRDF + A +
Sbjct: 11 ITLLDGGLGQELIKRS--SAPPHPLWSTKVMLDEPHLVSDIHRDFC----DAGARV---- 60
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
+ + S H + + + ++G+ + P T AS+ P
Sbjct: 61 -ICLNTYAVSRHRLKTFAPEHSVKEMLDAAATTAKSGISASSATNPV---STVASLPPLN 116
Query: 385 -----TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
TV D Y ++L+A + +VE + LET+ EA A
Sbjct: 117 ASYDHTVAPDFDNAYEQY------SELVALQKDSVEGFL--------LETMSNIAEATAG 162
Query: 440 VKLLREFPGQKAWLSFSCKDD--THTSHGELISSAVTSCLLANPDQIQAIGVNCVRP--- 494
K +R+ G + F+ D GEL++ A+ + +PD AI +NC P
Sbjct: 163 AKAIRD-AGVIGAVGFTLSDSDPQKLRSGELLADAIAAVKPYSPD---AIMLNCSTPEVV 218
Query: 495 -----SHVSTLVRC--IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWL 547
+ +++ +RC +V+ +V G D + + D+Y L +V WL
Sbjct: 219 TEGLKTALASGIRCGAYANGFTSVEALV---PGSTVDRLASRKDLGPDDY--LAFVKTWL 273
Query: 548 EEGVNIIGGCCEVTSYEIQQMRIMIDE 574
E GV IIGGCCE+ I+ +R +DE
Sbjct: 274 EMGVEIIGGCCEIGPDHIRAIRSYLDE 300
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 99/246 (40%), Gaps = 45/246 (18%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K+ LLDG ++ + + HPLWS+ + EP + HRDF AGA +I + Y
Sbjct: 10 KITLLDGGLGQELIKRS--SAPPHPLWSTKVMLDEPHLVSDIHRDFCDAGARVICLNTYA 67
Query: 66 ANVDNLTKLG--YSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
+ L +S +E LD + + SA N + T AS
Sbjct: 68 VSRHRLKTFAPEHSVKEMLDAAATTAKSGISASSATNP----------------VSTVAS 111
Query: 124 IGPYG-----TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 178
+ P TV D Y ++L+A + +VE + LET+
Sbjct: 112 LPPLNASYDHTVAPDFDNAYEQY------SELVALQKDSVEGFL--------LETMSNIA 157
Query: 179 EALALVKLLREFPGQKAWLSFSCKDD--THTSHGELISSAVTSCLLANPDQIQAIGVNCV 236
EA A K +R+ G + F+ D GEL++ A+ + +PD AI +NC
Sbjct: 158 EATAGAKAIRD-AGVIGAVGFTLSDSDPQKLRSGELLADAIAAVKPYSPD---AIMLNCS 213
Query: 237 RPSHVS 242
P V+
Sbjct: 214 TPEVVT 219
>gi|109899125|ref|YP_662380.1| homocysteine S-methyltransferase [Pseudoalteromonas atlantica T6c]
gi|109701406|gb|ABG41326.1| homocysteine S-methyltransferase [Pseudoalteromonas atlantica T6c]
Length = 304
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 133/309 (43%), Gaps = 47/309 (15%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIR--GHIETAASIGP 322
+ +LDG ++ R + +DV P+WS+ + EPE + HR+FI + T +
Sbjct: 12 ITILDGGMGQELLRRSSRDVT--PMWSADIMLNEPELVRDLHREFINSGARVITLNTYTA 69
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
L+ +++ + H +A +RA + +AL + A S+ P
Sbjct: 70 TPQRLKRENQFE----------QFVHLH----DAAMRAAQEAIALTQRD-DVMIAGSLPP 114
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 442
S H S++ D + +R V AL G D ET+ + EA A
Sbjct: 115 LVA--------SYHPEVSLSFEDSLVSYRQLV-ALQSLGSDIFICETMSSICEAQAACTA 165
Query: 443 LREFPGQKAWLSFSCKDDT--HTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 500
+E G+ W++F+ D GEL+ A+ + +PD AI +NC P +S
Sbjct: 166 AKE-SGKPVWVAFTVSDTEPDQLRSGELLKDALDALKALSPD---AIMLNCSLPEAISAC 221
Query: 501 VRCIKQSHPTVQT---------IVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGV 551
++QS+ + +YP G + + M+ + ++Y+ + W++ G
Sbjct: 222 WSLMQQSNAKIGAYANGFVSIDALYP--GDTVEELEMRKDMSPEQYAA--HAMHWVQNGA 277
Query: 552 NIIGGCCEV 560
+IIGGCCE+
Sbjct: 278 SIIGGCCEI 286
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 32/251 (12%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ +LDG ++ R + +DV P+WS+ + EPE + HR+FI +GA +I + Y A
Sbjct: 12 ITILDGGMGQELLRRSSRDVT--PMWSADIMLNEPELVRDLHREFINSGARVITLNTYTA 69
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
L + EQ +H M +A++ I L + +++ A S+ P
Sbjct: 70 TPQRLKRENQFEQ----FVHLHDAAMRAAQEA------IALTQRDDVM-----IAGSLPP 114
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
S H S++ D + +R V AL G D ET+ + EA A
Sbjct: 115 LVA--------SYHPEVSLSFEDSLVSYRQLV-ALQSLGSDIFICETMSSICEAQAACTA 165
Query: 187 LREFPGQKAWLSFSCKDDT--HTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
+E G+ W++F+ D GEL+ A+ + +PD AI +NC P +S
Sbjct: 166 AKE-SGKPVWVAFTVSDTEPDQLRSGELLKDALDALKALSPD---AIMLNCSLPEAISAC 221
Query: 245 VRCIKQSHPTV 255
++QS+ +
Sbjct: 222 WSLMQQSNAKI 232
>gi|71401930|ref|XP_803936.1| homocysteine S-methyltransferase [Trypanosoma cruzi strain CL
Brener]
gi|70866628|gb|EAN82085.1| homocysteine S-methyltransferase, putative [Trypanosoma cruzi]
Length = 410
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 140/352 (39%), Gaps = 80/352 (22%)
Query: 3 KICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSS 62
++ V + DG+ + + + +WSS L +E + HR +I AG D++ +
Sbjct: 5 RVNGVLIKDGAMGTLLESWDVDYAKAGSMWSSSVLLSEMDLVKRAHRAYIDAGCDVLLTC 64
Query: 63 CYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIET-- 120
YQ + + S+ +L+ ++VQ K+ Q + TG I+
Sbjct: 65 TYQMHEEGCAA---SKVTMCELVDRAVQAARHTMPKQKQKGLTEESTAKERRTGGIDVFR 121
Query: 121 -----------------AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA-LV 162
A S+GPYG+ L G EY G Y S+ EA + ++H +EA L
Sbjct: 122 YALSSIKDNGQERVVLLAGSLGPYGSFLPGGQEYLGEY--SIHEAVINSFHARRLEAFLC 179
Query: 163 RAG------VDYLALETIPAEKEALALV------KLLREFPGQKAWLSFSCKD------- 203
G VD+ LET P EAL ++ ++LR P ++++ K+
Sbjct: 180 NVGEKHAFKVDFFLLETFPRLDEALGILSFVNQHEILRTAPFCFSFIAAPVKNPLPENAD 239
Query: 204 ------------------DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
D +T G L S +C A + +G NC P VS +
Sbjct: 240 DDALDNWWNAAASSIRLPDGNTFEGAL-SELRGNCGTA----LVGMGCNCSGPLEVSLVA 294
Query: 246 RCI--KQSHPT---VQTIVYPNKGVKLLDGSF--------TSQVSRHTIKDV 284
+ K+ T + ++YPN G K DG + TS + +++D+
Sbjct: 295 TALLHKKRQGTEGPLVLLLYPNSGEKFTDGQWKKPPQQIQTSAAKKLSMRDL 346
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 80/209 (38%), Gaps = 31/209 (14%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIET------- 316
GV + DG+ + + + +WSS L +E + HR +I +
Sbjct: 8 GVLIKDGAMGTLLESWDVDYAKAGSMWSSSVLLSEMDLVKRAHRAYIDAGCDVLLTCTYQ 67
Query: 317 ------AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKP 370
AAS ++ + + H + + L + G+D
Sbjct: 68 MHEEGCAASKVTMCELVDRAVQAARHTMPKQKQKGLT--EESTAKERRTGGIDVFRYALS 125
Query: 371 SISSQ-------TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA-LVRAG- 421
SI A S+GPYG+ L G EY G Y S+ EA + ++H +EA L G
Sbjct: 126 SIKDNGQERVVLLAGSLGPYGSFLPGGQEYLGEY--SIHEAVINSFHARRLEAFLCNVGE 183
Query: 422 -----VDYLALETIPAEKEALALVKLLRE 445
VD+ LET P EAL ++ + +
Sbjct: 184 KHAFKVDFFLLETFPRLDEALGILSFVNQ 212
>gi|320587427|gb|EFW99907.1| homocysteine s-methyltransferase [Grosmannia clavigera kw1407]
Length = 380
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 121/293 (41%), Gaps = 42/293 (14%)
Query: 5 CKVKLLDGSF-TSQVSRHTIK-DVDGHPLWSSVYLTTEPEACVET-----HRDFIRAGAD 57
C +++LDG TS R+ ++ PLWSS L T P++ ET DF RAGAD
Sbjct: 4 CPIRILDGGLGTSLQDRYGVEFSSAATPLWSSHLLATGPQSEPETLLQRCQADFCRAGAD 63
Query: 58 IIQSSCYQANVDNLTKLGYSEQEALDLLHKS--VQLMNSAKDKENQTPDINLNKTFNLLT 115
+++++ YQ + L + ++ + Q + A ++
Sbjct: 64 VLETATYQISTAGLARTRVLPDHPDGIVEPADVYQFLERAVAVAEAAGNVETEAKTTKHE 123
Query: 116 GHIETAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVD------- 167
A S+GPYG + +EYSG Y D L WH + L GV+
Sbjct: 124 TAPSIALSLGPYGACMIPSTEYSGAYDFDGRNTTALRRWHADRLR-LFDVGVNRLADRVR 182
Query: 168 YLALETIPAEKEALALVKLLR---------EFPGQKAWLSF--SCKDDTHTSH------- 209
YLA ET+P E +A+ +L P + A L + SC ++H
Sbjct: 183 YLAFETVPRLDEIVAVRQLYNVSGNHGDTDTIPSRLAALPYWISCVFPGDSAHEPPATLP 242
Query: 210 -GELISSAVTSCLLANPDQ--IQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIV 259
G + AV + L ++ IG+NC + + L + I++ V+++V
Sbjct: 243 DGSTVEQAVEAMLTSSSSTHLPWGIGINCTK---IGRLPQLIERYEAAVESLV 292
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 151/389 (38%), Gaps = 90/389 (23%)
Query: 262 NKGVKLLDGSF-TSQVSRHTIK-DVDGHPLWSSVYLTTEPEACVET-----HRDFIRGH- 313
N +++LDG TS R+ ++ PLWSS L T P++ ET DF R
Sbjct: 3 NCPIRILDGGLGTSLQDRYGVEFSSAATPLWSSHLLATGPQSEPETLLQRCQADFCRAGA 62
Query: 314 --IETAASIGPYGTVLR--------DGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 363
+ETA + R DG + A +A NVE +
Sbjct: 63 DVLETATYQISTAGLARTRVLPDHPDGIVEPADVYQFLERAVAVAEAAGNVETEAKTTKH 122
Query: 364 YLALIKPSISSQTAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGV 422
A PSI A S+GPYG + +EYSG Y D L WH + L GV
Sbjct: 123 ETA---PSI----ALSLGPYGACMIPSTEYSGAYDFDGRNTTALRRWHADRLR-LFDVGV 174
Query: 423 D-------YLALETIPAEKEALALVKLLR---------EFPGQKAWLSF--SCKDDTHTS 464
+ YLA ET+P E +A+ +L P + A L + SC ++
Sbjct: 175 NRLADRVRYLAFETVPRLDEIVAVRQLYNVSGNHGDTDTIPSRLAALPYWISCVFPGDSA 234
Query: 465 H--------GELISSAVTSCLLANPDQ--IQAIGVNCVRPSHVSTLVRCIKQSHPTVQTI 514
H G + AV + L ++ IG+NC + + L + I++ V+++
Sbjct: 235 HEPPATLPDGSTVEQAVEAMLTSSSSTHLPWGIGINCTK---IGRLPQLIERYEAAVESL 291
Query: 515 V-------------YPN--KGGVWDSVHMKW------------LDTEDEYSILHYVP--Q 545
V YP+ G V+++ +W + + +L +
Sbjct: 292 VATGRLSDWPALVLYPDGTNGEVYNTTTQRWEMPAGVSAPKDPWEAQLSQMVLDAASRGK 351
Query: 546 WLEEGVNIIGGCCEVTSYEIQQMRIMIDE 574
W E ++GGCC+ T +I+ ++ + E
Sbjct: 352 WRE---ILVGGCCKATDRDIKALKASLRE 377
>gi|440469328|gb|ELQ38443.1| homocysteine S-methyltransferase [Magnaporthe oryzae Y34]
gi|440482124|gb|ELQ62642.1| homocysteine S-methyltransferase [Magnaporthe oryzae P131]
Length = 353
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 114/288 (39%), Gaps = 46/288 (15%)
Query: 7 VKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+K+LDG T+ R + PLWSS L ++ E R+F AGAD++ ++ YQ
Sbjct: 4 IKILDGGLGTTLEDRFGVVFTHAKPLWSSDLLVSDQETLQACQREFAAAGADVLLTATYQ 63
Query: 66 ANVDNLTKLGYSE---------------QEALDLLHKSVQLMNSAKDKENQTPDINLNKT 110
+V+ + E + A+++ K+ +A P N+T
Sbjct: 64 VSVEAFARTKTPEHPDGIAPSSAMLPYLRGAVEIAEKAAAAAAAAAAAAAAAPR---NET 120
Query: 111 FNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA-WHRPNVEALVRAGVD-- 167
E A + GPYG + G EY+G Y + + D ++ WH + AG D
Sbjct: 121 SAPSPQPAELALACGPYGAAMTPGQEYTGAYDAAHSTPDALSRWHLDRLALYAAAGEDVP 180
Query: 168 ----YLALETIPAEKEALAL---VKLLRE------FPGQKAWLSFSCKDDTHTSHGELIS 214
Y+A ET+P E A+ + LR+ FP + +D + G +
Sbjct: 181 GRCAYVAFETVPNLAEVWAVRDAITRLRQDASCSRFPSRFWICCVFPHEDERLADGSSVD 240
Query: 215 SAVTSCLLANPDQIQ-----------AIGVNCVRPSHVSTLVRCIKQS 251
V + L A IG+NC + + L++ ++S
Sbjct: 241 QVVEAMLAARGGGENGGAKESLALPWGIGINCTKIYKLEGLIKSFERS 288
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 127/337 (37%), Gaps = 57/337 (16%)
Query: 265 VKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
+K+LDG T+ R + PLWSS L ++ E R+F + +
Sbjct: 4 IKILDGGLGTTLEDRFGVVFTHAKPLWSSDLLVSDQETLQACQREFAAAGADVLLTATYQ 63
Query: 324 GTVLRDGSEYSGHYVDSMTEAD-LIAWHRPNVEALVRAGVDYLALI------------KP 370
+V + + D + + ++ + R VE +A A P
Sbjct: 64 VSVEAFARTKTPEHPDGIAPSSAMLPYLRGAVEIAEKAAAAAAAAAAAAAAAPRNETSAP 123
Query: 371 SIS-SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA-WHRPNVEALVRAGVD----- 423
S ++ A + GPYG + G EY+G Y + + D ++ WH + AG D
Sbjct: 124 SPQPAELALACGPYGAAMTPGQEYTGAYDAAHSTPDALSRWHLDRLALYAAAGEDVPGRC 183
Query: 424 -YLALETIPAEKEALAL---VKLLRE------FPGQKAWLSFSCKDDTHTSHGELISSAV 473
Y+A ET+P E A+ + LR+ FP + +D + G + V
Sbjct: 184 AYVAFETVPNLAEVWAVRDAITRLRQDASCSRFPSRFWICCVFPHEDERLADGSSVDQVV 243
Query: 474 TSCLLANPDQIQ-----------AIGVNCVRPSHVSTLVRCIKQSHPTVQT--------- 513
+ L A IG+NC + + L++ ++S ++
Sbjct: 244 EAMLAARGGGENGGAKESLALPWGIGINCTKIYKLEGLIKSFERSISGLKAKGVITNVPA 303
Query: 514 -IVYPN--KGGVWDSVHMKWLDTEDEYSILHYVPQWL 547
++YP+ G V+++ KW E + P+W+
Sbjct: 304 LVLYPDGTNGEVYNTTTQKW---EAPQVVQGAGPKWV 337
>gi|407645797|ref|YP_006809556.1| homocysteine S-methyltransferase [Nocardia brasiliensis ATCC
700358]
gi|407308681|gb|AFU02582.1| homocysteine S-methyltransferase [Nocardia brasiliensis ATCC
700358]
Length = 304
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 117/259 (45%), Gaps = 33/259 (12%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACV--ETHRDFIRAGADIIQSSCY 64
V LLDG +++ R + P W++ + T+ V H ++ AGA +I ++ +
Sbjct: 10 VVLLDGGSATELQRAGLSVRP--PWWTARAMLTDANRTVLQSVHEAYLAAGAQVITANTF 67
Query: 65 QANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
+AN+ L++ + ++H +V + +A+ K + P+ + A SI
Sbjct: 68 RANLRALSRTKLDDAGRAWMVHAAVGVAGAAR-KHARVPEARI-------------AGSI 113
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA-LAL 183
GP Y V S + +L A H V L RAGVD +ET+ +EA +AL
Sbjct: 114 GPVEDC------YRPDLVPS--DEELRAEHGWLVRELSRAGVDLFLIETMNTIREARIAL 165
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
++L G +AW+SF C DD GE ++ AV + D +A+ +NC P
Sbjct: 166 AQVL--AAGGRAWVSFVCADDATLLSGEPLTGAVHAV---QRDGAEAVLINCTSPHGTEV 220
Query: 244 LVRCIKQSHPTVQTIVYPN 262
+R + + + YPN
Sbjct: 221 ALRVLCRGRAGLIG-AYPN 238
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 402 TEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA-LALVKLLREFPGQKAWLSFSCKDD 460
++ +L A H V L RAGVD +ET+ +EA +AL ++L G +AW+SF C DD
Sbjct: 127 SDEELRAEHGWLVRELSRAGVDLFLIETMNTIREARIALAQVL--AAGGRAWVSFVCADD 184
Query: 461 THTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPN-- 518
GE ++ AV + D +A+ +NC P +R + + + YPN
Sbjct: 185 ATLLSGEPLTGAVHAV---QRDGAEAVLINCTSPHGTEVALRVLCRGRAGLIG-AYPNIE 240
Query: 519 -KGGVWDSVHMKWLD----TEDEYSILHYVPQWLEE-GVNIIGGCC 558
+ G+ H+ + +EY+ L V +W E G++I+GGCC
Sbjct: 241 DRTGLPPYEHVDRAVPAALSPEEYAEL--VARWCTEYGLDIVGGCC 284
>gi|389643936|ref|XP_003719600.1| homocysteine S-methyltransferase [Magnaporthe oryzae 70-15]
gi|351639369|gb|EHA47233.1| homocysteine S-methyltransferase [Magnaporthe oryzae 70-15]
Length = 380
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 114/288 (39%), Gaps = 46/288 (15%)
Query: 7 VKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+K+LDG T+ R + PLWSS L ++ E R+F AGAD++ ++ YQ
Sbjct: 4 IKILDGGLGTTLEDRFGVVFTHAKPLWSSDLLVSDQETLQACQREFAAAGADVLLTATYQ 63
Query: 66 ANVDNLTKLGYSE---------------QEALDLLHKSVQLMNSAKDKENQTPDINLNKT 110
+V+ + E + A+++ K+ +A P N+T
Sbjct: 64 VSVEAFARTKTPEHPDGIAPSSAMLPYLRGAVEIAEKAAAAAAAAAAAAAAAPR---NET 120
Query: 111 FNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA-WHRPNVEALVRAGVD-- 167
E A + GPYG + G EY+G Y + + D ++ WH + AG D
Sbjct: 121 SAPSPQPAELALACGPYGAAMTPGQEYTGAYDAAHSTPDALSRWHLDRLALYAAAGEDVP 180
Query: 168 ----YLALETIPAEKEALAL---VKLLRE------FPGQKAWLSFSCKDDTHTSHGELIS 214
Y+A ET+P E A+ + LR+ FP + +D + G +
Sbjct: 181 GRCAYVAFETVPNLAEVWAVRDAITRLRQDASCSRFPSRFWICCVFPHEDERLADGSSVD 240
Query: 215 SAVTSCLLANPDQIQ-----------AIGVNCVRPSHVSTLVRCIKQS 251
V + L A IG+NC + + L++ ++S
Sbjct: 241 QVVEAMLAARGGGENGGAKESLALPWGIGINCTKIYKLEGLIKSFERS 288
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 140/377 (37%), Gaps = 67/377 (17%)
Query: 265 VKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
+K+LDG T+ R + PLWSS L ++ E R+F + +
Sbjct: 4 IKILDGGLGTTLEDRFGVVFTHAKPLWSSDLLVSDQETLQACQREFAAAGADVLLTATYQ 63
Query: 324 GTVLRDGSEYSGHYVDSMTEAD-LIAWHRPNVEALVRAGVDYLALI------------KP 370
+V + + D + + ++ + R VE +A A P
Sbjct: 64 VSVEAFARTKTPEHPDGIAPSSAMLPYLRGAVEIAEKAAAAAAAAAAAAAAAPRNETSAP 123
Query: 371 SIS-SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIA-WHRPNVEALVRAGVD----- 423
S ++ A + GPYG + G EY+G Y + + D ++ WH + AG D
Sbjct: 124 SPQPAELALACGPYGAAMTPGQEYTGAYDAAHSTPDALSRWHLDRLALYAAAGEDVPGRC 183
Query: 424 -YLALETIPAEKEALAL---VKLLRE------FPGQKAWLSFSCKDDTHTSHGELISSAV 473
Y+A ET+P E A+ + LR+ FP + +D + G + V
Sbjct: 184 AYVAFETVPNLAEVWAVRDAITRLRQDASCSRFPSRFWICCVFPHEDERLADGSSVDQVV 243
Query: 474 TSCLLANPDQIQ-----------AIGVNCVRPSHVSTLVRCIKQSHPTVQT--------- 513
+ L A IG+NC + + L++ ++S ++
Sbjct: 244 EAMLAARGGGENGGAKESLALPWGIGINCTKIYKLEGLIKSFERSISGLKAKGVITNVPA 303
Query: 514 -IVYPN--KGGVWDSVHMKW----------LDTEDEYSILHYVPQWLEEGV---NIIGGC 557
++YP+ G V+++ KW T + + V GV ++GGC
Sbjct: 304 LVLYPDGTNGEVYNTTTQKWEAPQVVQGAGPKTPWDAQLTQIVNDTKSRGVFTSFLVGGC 363
Query: 558 CEVTSYEIQQMRIMIDE 574
C+ I+ +R + E
Sbjct: 364 CKANPQNIKDLRNRLKE 380
>gi|322712417|gb|EFZ03990.1| hypothetical protein MAA_01064 [Metarhizium anisopliae ARSEF 23]
Length = 343
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 106/261 (40%), Gaps = 37/261 (14%)
Query: 6 KVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
++ +LDG TS + K PLWSS L ++P ++ DF DI+ ++ Y
Sbjct: 3 RILILDGGLGTSLEQNYNTKFNPSTPLWSSDLLVSDPTTLLQCQSDFAAVPVDILLTATY 62
Query: 65 QANVDNLTKL-------GYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH 117
Q ++ G S + + +V + +A H
Sbjct: 63 QVSIAGFAGTKTPKFPHGISPLDIPPFMETAVAVAENATRAH-----------------H 105
Query: 118 IETAASIGPYGTVLRDGSEYSGHYVDSM-TEADLIAWHRPNVEALVR-----AGVDYLAL 171
A S+GPYG + EYSG Y D+ ++ L WHR ++ R + + Y+++
Sbjct: 106 GSVALSLGPYGACMIPSQEYSGEYDDAHDSQEALREWHRERMQLFGRVRGLASRIGYISM 165
Query: 172 ETIPAEKEALALVKLLREFP---GQKAWLS-FSCKDDTHTSHGELISSAVTSCLLANPDQ 227
ETIP E A+ L + P G W+S D GE +A+ + + +
Sbjct: 166 ETIPRADEIAAMRAALDQVPELAGVPFWMSCLYPGDGPCLPSGEAPETALRAMFDSRVAK 225
Query: 228 --IQAIGVNCVRPSHVSTLVR 246
+G+NC + ++ L++
Sbjct: 226 SVPWGVGINCTKVWKLTALLK 246
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 139/349 (39%), Gaps = 55/349 (15%)
Query: 263 KGVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
K + +LDG TS + K PLWSS L ++P ++ DF ++ +
Sbjct: 2 KRILILDGGLGTSLEQNYNTKFNPSTPLWSSDLLVSDPTTLLQCQSDFAAVPVDILLTAT 61
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
++ + + ++ D+ P +E V + S+ A S+G
Sbjct: 62 YQVSIAGFAGTKTPKFPHGISPLDI----PPFMETAVAVAENATRAHHGSV----ALSLG 113
Query: 382 PYGTVLRDGSEYSGHYVDSM-TEADLIAWHRPNVEALVR-----AGVDYLALETIPAEKE 435
PYG + EYSG Y D+ ++ L WHR ++ R + + Y+++ETIP E
Sbjct: 114 PYGACMIPSQEYSGEYDDAHDSQEALREWHRERMQLFGRVRGLASRIGYISMETIPRADE 173
Query: 436 ALALVKLLREFP---GQKAWLS-FSCKDDTHTSHGELISSAVTSCLLANPDQ--IQAIGV 489
A+ L + P G W+S D GE +A+ + + + +G+
Sbjct: 174 IAAMRAALDQVPELAGVPFWMSCLYPGDGPCLPSGEAPETALRAMFDSRVAKSVPWGVGI 233
Query: 490 NCVRPSHVSTLVRCIKQSHPTVQTIV-------------YPN--KGGVWDSVHMKWLDTE 534
NC + V L +KQ + +V YP+ G V+++V W +
Sbjct: 234 NCTK---VWKLTALLKQYESVMDMLVRDGTLLEWPALVLYPDGTNGEVYNTVTQVW-EVP 289
Query: 535 DEYSILHYVPQWLE---------EGVN-----IIGGCCEVTSYEIQQMR 569
+ + VP W E EG ++GGCC + +I ++R
Sbjct: 290 GDVGDVSRVP-WEEQLAEVVRGTEGRGKWRQIVVGGCCMASWQDIARLR 337
>gi|119183406|ref|XP_001242744.1| hypothetical protein CIMG_06640 [Coccidioides immitis RS]
Length = 1785
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 122/275 (44%), Gaps = 29/275 (10%)
Query: 1 MSK-ICKVKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGAD 57
MSK I + LLDG+ + + + PLWSS L + P E HR ++ AGAD
Sbjct: 1 MSKHIPNILLLDGAMGTVLEEPPYGFTFSAQTPLWSSHLLLSHPTTLSEIHRSYVDAGAD 60
Query: 58 IIQSSCYQANVDNLTKLGY--------SEQEALDLLHKSVQLMNSAKDKENQTPDINLNK 109
I+ ++ YQA+ + + +Q+ D H + + M++ + + P
Sbjct: 61 IVLTATYQASFEGFARTAIVPANVPADHKQDERD-GHATYRPMDATRYMRSAIP--LAYS 117
Query: 110 TFNLLTGHIETAASIGPYG-TVLRDGSEYSGHYVDSMTE-ADLIAWHRPNVEALVR---- 163
+FN + A S+GPYG T+ +EY+G Y + M+ A L AWH ++ +
Sbjct: 118 SFNFSSKPPRVALSLGPYGATMCPVSAEYTGIYPEEMSNTAALEAWHANRLKVYMEDPET 177
Query: 164 -AGVDYLALETIPAEKEALA-------LVKLLREFPGQKAWLS-FSCKDDTHTSHGELIS 214
+++L ET+ E LA L+++ +K W++ ++D +
Sbjct: 178 WRKIEFLGFETVRRWDEVLAIRGAMGKLLQIAESGQSRKWWITGVFPQEDIDEEDVRRWT 237
Query: 215 SAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 249
SA N + IGVNC R +V +V ++
Sbjct: 238 SAAFGSTSENGLRPWGIGVNCTRLENVERIVDIME 272
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 28/243 (11%)
Query: 288 PLWSSVYLTTEPEACVETHRDFIRGHIE-------TAASIGPYGTVLRDGSEYSGHYVDS 340
PLWSS L + P E HR ++ + A+ G T + + + H D
Sbjct: 33 PLWSSHLLLSHPTTLSEIHRSYVDAGADIVLTATYQASFEGFARTAIVPANVPADHKQD- 91
Query: 341 MTEADLIAWHRP-NVEALVRAGVD--YLALIKPSISSQTAASIGPYG-TVLRDGSEYSGH 396
E D A +RP + +R+ + Y + S + A S+GPYG T+ +EY+G
Sbjct: 92 --ERDGHATYRPMDATRYMRSAIPLAYSSFNFSSKPPRVALSLGPYGATMCPVSAEYTGI 149
Query: 397 YVDSMTE-ADLIAWHRPNVEALVR-----AGVDYLALETIPAEKEALA-------LVKLL 443
Y + M+ A L AWH ++ + +++L ET+ E LA L+++
Sbjct: 150 YPEEMSNTAALEAWHANRLKVYMEDPETWRKIEFLGFETVRRWDEVLAIRGAMGKLLQIA 209
Query: 444 REFPGQKAWLS-FSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
+K W++ ++D +SA N + IGVNC R +V +V
Sbjct: 210 ESGQSRKWWITGVFPQEDIDEEDVRRWTSAAFGSTSENGLRPWGIGVNCTRLENVERIVD 269
Query: 503 CIK 505
++
Sbjct: 270 IME 272
>gi|410075748|ref|XP_003955456.1| hypothetical protein KAFR_0B00210 [Kazachstania africana CBS 2517]
gi|372462039|emb|CCF56321.1| hypothetical protein KAFR_0B00210 [Kazachstania africana CBS 2517]
Length = 326
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 19/200 (9%)
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-AGVDYLALETIPAEKEALA 438
IGP+G + +E++G Y D A+ +P ++ + +D + ET+P E A
Sbjct: 126 IGPWGAHV--CAEFNGDYGGHPENIDYYAYFKPQLDNFFQNKDLDLIGFETVPNFHELKA 183
Query: 439 LVKLLREFPGQKAWLSFSCKDD-------THTSHGELISSAVTSCLLANPDQIQAIGVNC 491
++ + ++ S ++ T G I S + NP+ + +G+NC
Sbjct: 184 ILSWDDTILSKPFYIGLSVHENGVLRDGTTMNEIGYYIKSLGSKI---NPNFL-LLGINC 239
Query: 492 VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHY---VPQWLE 548
V S ++ I + P + I YPN G ++D+V WL + YS + + V ++++
Sbjct: 240 VSFSDSPDILESIHKELPDMPLIAYPNSGEIYDTVKKIWL--PNHYSDITWNDVVNRYIK 297
Query: 549 EGVNIIGGCCEVTSYEIQQM 568
G IIGGCC +I+Q+
Sbjct: 298 AGARIIGGCCRTMPDDIEQV 317
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 114/279 (40%), Gaps = 46/279 (16%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP----------EACVETHRDFIRAG 55
KV +LDG +++ I + P+WS++ +E E +DF+ AG
Sbjct: 16 KVLVLDGGQGTELENRGIHVAN--PVWSTIPFISESFWSNASSKDREIVKGMFQDFLDAG 73
Query: 56 ADIIQSSCYQANVDNLTKLG--YSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNL 113
ADI+ + YQ + ++T+ + +E +LL + V S E
Sbjct: 74 ADILMTITYQTSFKSVTENTPIKTLKEYNELLERIVSFSRSCIGDEK------------Y 121
Query: 114 LTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-AGVDYLALE 172
L G IGP+G + +E++G Y D A+ +P ++ + +D + E
Sbjct: 122 LIG------CIGPWGAHV--CAEFNGDYGGHPENIDYYAYFKPQLDNFFQNKDLDLIGFE 173
Query: 173 TIPAEKEALALVKLLREFPGQKAWLSFSCKDD-------THTSHGELISSAVTSCLLANP 225
T+P E A++ + ++ S ++ T G I S + NP
Sbjct: 174 TVPNFHELKAILSWDDTILSKPFYIGLSVHENGVLRDGTTMNEIGYYIKSLGSKI---NP 230
Query: 226 DQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+ + +G+NCV S ++ I + P + I YPN G
Sbjct: 231 NFL-LLGINCVSFSDSPDILESIHKELPDMPLIAYPNSG 268
>gi|242776848|ref|XP_002478914.1| homocysteine S-methyltransferase, putative [Talaromyces stipitatus
ATCC 10500]
gi|218722533|gb|EED21951.1| homocysteine S-methyltransferase, putative [Talaromyces stipitatus
ATCC 10500]
Length = 369
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 111/263 (42%), Gaps = 33/263 (12%)
Query: 6 KVKLLDGSF--TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
++ LLDG T + S ++ PLWSS L P H F AGADII ++
Sbjct: 23 QILLLDGGLGTTLEASPFNVQFTPEKPLWSSHLLIDSPSTLQAAHHAFCDAGADIILTAT 82
Query: 64 YQANVDNLTKLG--YSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETA 121
YQ + + T+ Y+ ++A + ++ L+ SA + T D +K ++ A
Sbjct: 83 YQTSTEGFTRTNSSYTARDAAQYMRSAIPLVRSAV---SSTAD---DKKRSV-------A 129
Query: 122 ASIGPYGTVLRD-GSEYSGHYVDSMT-EADLIAWHRPNVEALVRA------GVDYLALET 173
S+GPYG + +EY+G Y M E L WH ++ + VDY+A ET
Sbjct: 130 LSLGPYGATMSPVSAEYTGIYPPEMDGENALREWHTQRLKIFTESEDESWDQVDYIAFET 189
Query: 174 IPAEKEALALVKLL-----REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPD-- 226
+ E A+ + R+ +K W E I V + + +P
Sbjct: 190 LRRADEVCAVRGAVCDVVGRDSTSKKPWWICGVFPGEQVDEEE-IRQWVRAAVGNHPGLP 248
Query: 227 QIQAIGVNCVRPSHVSTLVRCIK 249
+ IG+NC R V +V ++
Sbjct: 249 RPWGIGLNCTRIDRVEAIVSIMR 271
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 132/354 (37%), Gaps = 58/354 (16%)
Query: 265 VKLLDGSF--TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
+ LLDG T + S ++ PLWSS L P H F + +
Sbjct: 24 ILLLDGGLGTTLEASPFNVQFTPEKPLWSSHLLIDSPSTLQAAHHAFCDAGADIILT-AT 82
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
Y T + + Y T D + R + LVR+ V A K A S+GP
Sbjct: 83 YQTSTEGFTRTNSSY----TARDAAQYMRSAI-PLVRSAVSSTADDK---KRSVALSLGP 134
Query: 383 YGTVLRD-GSEYSGHYVDSMT-EADLIAWHRPNVEALVRA------GVDYLALETIPAEK 434
YG + +EY+G Y M E L WH ++ + VDY+A ET+
Sbjct: 135 YGATMSPVSAEYTGIYPPEMDGENALREWHTQRLKIFTESEDESWDQVDYIAFETLRRAD 194
Query: 435 EALALVKLL-----REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPD--QIQAI 487
E A+ + R+ +K W E I V + + +P + I
Sbjct: 195 EVCAVRGAVCDVVGRDSTSKKPWWICGVFPGEQVDEEE-IRQWVRAAVGNHPGLPRPWGI 253
Query: 488 GVNCVRPSHVSTLVRCIKQ----------------SHPTVQTIVYPN--KGGVWDSVHMK 529
G+NC R V +V ++ S P + ++YP+ KG +D V
Sbjct: 254 GLNCTRIDRVEAIVSIMRDEVRRLLDQAQIDEWASSKPWL--VLYPDGTKGEKYDPVTKT 311
Query: 530 WLDT----------EDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMID 573
W+ + E + I+ + + E G ++GGCC +I +R ID
Sbjct: 312 WVQSVTDTVKRPWDEIFWDIIQHQSK-AEWGGIVVGGCCRAGPADIAALRRRID 364
>gi|403161817|ref|XP_003322130.2| hypothetical protein PGTG_03667 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171939|gb|EFP77711.2| hypothetical protein PGTG_03667 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 370
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 124/308 (40%), Gaps = 71/308 (23%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDG----HPLWSSVYLTTEPEACVETHRDFIRAGADIIQS 61
K+ L+DG S T++D G LWSS L PE H + +AGA II +
Sbjct: 13 KIVLMDGG-----SGTTLEDEFGCRLKSQLWSSELLLNRPEILSSLHHAWEQAGAQIIST 67
Query: 62 SCYQANVDNLTKL------GYSEQE------ALDLLHKSVQLMNSAKDKENQTPDINLNK 109
+ YQA ++ L G +E++ +L LL +SV L A+D
Sbjct: 68 ASYQATLEGFRSLLSQSSRGETEEKDVGSDVSLQLLRRSVAL---ARD------------ 112
Query: 110 TFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSM-TEADLIAWHRPNVEALVR----- 163
+L + A S+GPYG L G EYSG Y +E L+ +H +
Sbjct: 113 --SLSGSNARVALSLGPYGATLTPGQEYSGCYPAPYDSEEKLVNFHFDRLMDYAEDYSTW 170
Query: 164 AGVDYLALETIPAEKEALALVKLLREF------------------PGQKAW-LSFSCKDD 204
VD + ET+P EA A+ + ++F K W +SF
Sbjct: 171 EKVDIVLFETVPNLTEARAIRRAWKKFERTLHALIRRSATGANPDSSSKPWVISFVFPTS 230
Query: 205 T-HTSHGELISSAVTSCLLANPD----QIQAIGVNCVRPSHVSTLVRCIKQS---HPTVQ 256
T GE S + + L+ + D + +GVNC + ++ ++ + S H
Sbjct: 231 TGQFPTGENPSQVLQAALITDADAELAEPSGVGVNCTKLGNLQPILEAWRTSAVDHSKTW 290
Query: 257 TIVYPNKG 264
+YP+ G
Sbjct: 291 LWLYPDGG 298
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 155/382 (40%), Gaps = 81/382 (21%)
Query: 259 VYPNKG----VKLLDGSFTSQVSRHTIKDVDG----HPLWSSVYLTTEPEACVETHRDFI 310
++PN + L+DG S T++D G LWSS L PE H +
Sbjct: 4 LFPNHAGHPKIVLMDGG-----SGTTLEDEFGCRLKSQLWSSELLLNRPEILSSLHHAWE 58
Query: 311 RGH---IETA---ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY 364
+ I TA A++ + ++L S D ++ L L+R V
Sbjct: 59 QAGAQIISTASYQATLEGFRSLLSQSSRGETEEKDVGSDVSL---------QLLRRSV-- 107
Query: 365 LALIKPSIS---SQTAASIGPYGTVLRDGSEYSGHYVDSM-TEADLIAWHRPNVEALVR- 419
AL + S+S ++ A S+GPYG L G EYSG Y +E L+ +H +
Sbjct: 108 -ALARDSLSGSNARVALSLGPYGATLTPGQEYSGCYPAPYDSEEKLVNFHFDRLMDYAED 166
Query: 420 ----AGVDYLALETIPAEKEALALVKLLREF------------------PGQKAW-LSFS 456
VD + ET+P EA A+ + ++F K W +SF
Sbjct: 167 YSTWEKVDIVLFETVPNLTEARAIRRAWKKFERTLHALIRRSATGANPDSSSKPWVISFV 226
Query: 457 CKDDT-HTSHGELISSAVTSCLLANPD----QIQAIGVNCVRPSHVSTLVRCIKQS---H 508
T GE S + + L+ + D + +GVNC + ++ ++ + S H
Sbjct: 227 FPTSTGQFPTGENPSQVLQAALITDADAELAEPSGVGVNCTKLGNLQPILEAWRTSAVDH 286
Query: 509 PTVQTIVYPNKGGVWDSVHMKWLD---TEDEYS------ILHYVPQWLEEGVNIIGGCCE 559
+YP+ G +DSV+ W T E++ ++ W G+ ++GGCC+
Sbjct: 287 SKTWLWLYPDGGPTYDSVNRSWTGSPITHQEWANQLFTIASNFSASW--AGI-VLGGCCK 343
Query: 560 VTSYEIQQMRIMIDEFNTKKND 581
+ I+ + ++ +T +N+
Sbjct: 344 AGTPHIRALHQLLS--STARNE 363
>gi|344300595|gb|EGW30916.1| hypothetical protein SPAPADRAFT_62824 [Spathaspora passalidarum
NRRL Y-27907]
Length = 274
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 114/263 (43%), Gaps = 35/263 (13%)
Query: 5 CKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
K ++DG+ +Q+ K PLWS + +PE + HR++I +GADII ++ Y
Sbjct: 10 SKRLVMDGALGTQLEPFIPKT----PLWSGFAVLAKPEILAQVHREYIISGADIIATATY 65
Query: 65 QANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
Q + + L + ++ + + ++ + A D + + S
Sbjct: 66 QLSQNLLRQHTDLTDGQIEGIWESAINIALEAIDNRD-----------------VLVMGS 108
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV-RAGVDYLALETIPAEKEALA 182
IGPY L G+EYS + +D E L A+H P + A VD + LET+ +E +
Sbjct: 109 IGPYSASLGSGAEYSNN-IDVSNEF-LQAYHIPLFQYFSDNAKVDLIGLETVSTLQEFV- 165
Query: 183 LVKLLREFPGQKA-WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 241
+ EF K ++S D + G +S V+ + + +G+NC + +
Sbjct: 166 ---VFHEFNHTKPYYISIISNDGDNLPDGTSLSELVSYIDSHSDEWFIGLGINCTEYTLI 222
Query: 242 STLVRCIKQSHPTVQTIVYPNKG 264
S +V I + I+ PN G
Sbjct: 223 SKMVERIH-----LPVILNPNLG 240
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 120/286 (41%), Gaps = 36/286 (12%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFI--RGHIETAASIGPYG 324
++DG+ +Q+ K PLWS + +PE + HR++I I A+
Sbjct: 14 VMDGALGTQLEPFIPKT----PLWSGFAVLAKPEILAQVHREYIISGADIIATATYQLSQ 69
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
+LR ++ + ++ + E+ + N+ D L + SIGPY
Sbjct: 70 NLLRQHTDLTDGQIEGIWESAI------NIALEAIDNRDVLVM----------GSIGPYS 113
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV-RAGVDYLALETIPAEKEALALVKLL 443
L G+EYS + +D E L A+H P + A VD + LET+ +E + +
Sbjct: 114 ASLGSGAEYSNN-IDVSNEF-LQAYHIPLFQYFSDNAKVDLIGLETVSTLQEFV----VF 167
Query: 444 REFPGQKA-WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
EF K ++S D + G +S V+ + + +G+NC + +S +V
Sbjct: 168 HEFNHTKPYYISIISNDGDNLPDGTSLSELVSYIDSHSDEWFIGLGINCTEYTLISKMVE 227
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLE 548
I + I+ PN G + + + + + D Y + V WL+
Sbjct: 228 RIH-----LPVILNPNLGYIVEGDNARPKEKND-YEWIRGVTNWLQ 267
>gi|289578787|ref|YP_003477414.1| homocysteine S-methyltransferase [Thermoanaerobacter italicus Ab9]
gi|289528500|gb|ADD02852.1| homocysteine S-methyltransferase [Thermoanaerobacter italicus Ab9]
Length = 807
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 118/269 (43%), Gaps = 40/269 (14%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V + DG+ +Q+ +K + P + ++ T PE + HR +I AGAD+++++ +
Sbjct: 11 RVIIFDGAMGTQLQERGLKTGE-CPEYMNI---THPEVVFDIHRAYIEAGADVVETNTFG 66
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNS-AKDKENQTPDINLNKTFNLLTGHIETAASI 124
AN L K G E E +++ ++V++ AKDK A SI
Sbjct: 67 ANRIKLAKYGL-ENEVFNIVTQAVKIAKEVAKDK--------------------PVALSI 105
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
GP G +L + Y D E + V A +AG D + +ET+ EA A +
Sbjct: 106 GPTGELL---TPYGDMTFDEAYEV-----FKEVVVAGEKAGADIVLIETMSDILEAKAAI 157
Query: 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVST 243
+E K + + ++D T G S +T + + AIGVNC P +
Sbjct: 158 LAAKENSNMKVICTMTFQEDGRTLMG---SDPITVIVSLQGLGLDAIGVNCSTGPDKMIN 214
Query: 244 LVRCIKQSHPTVQTIVYPNKGVKLL-DGS 271
+V + Q + I PN G+ ++ DG
Sbjct: 215 VVEKMSQVS-RIPIIAQPNAGMPVIRDGK 242
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 132/322 (40%), Gaps = 44/322 (13%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIG 321
+K V + DG+ +Q+ +K + P + ++ T PE + HR +I + +
Sbjct: 9 SKRVIIFDGAMGTQLQERGLKTGE-CPEYMNI---THPEVVFDIHRAYIEAGADVVET-N 63
Query: 322 PYGTVLRDGSEYS--GHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAAS 379
+G ++Y + +T+A IA +A KP A S
Sbjct: 64 TFGANRIKLAKYGLENEVFNIVTQAVKIAKE--------------VAKDKP-----VALS 104
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
IGP G +L + Y D E + V A +AG D + +ET+ EA A
Sbjct: 105 IGPTGELL---TPYGDMTFDEAYEV-----FKEVVVAGEKAGADIVLIETMSDILEAKAA 156
Query: 440 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVS 498
+ +E K + + ++D T G S +T + + AIGVNC P +
Sbjct: 157 ILAAKENSNMKVICTMTFQEDGRTLMG---SDPITVIVSLQGLGLDAIGVNCSTGPDKMI 213
Query: 499 TLVRCIKQSHPTVQTIVYPNKGG--VWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556
+V + Q + I PN G + D + L E+ S + P +E+G +I+GG
Sbjct: 214 NVVEKMSQVS-RIPIIAQPNAGMPVIRDGKTVYDLKPEEFAS---FFPSLVEKGASIVGG 269
Query: 557 CCEVTSYEIQQMRIMIDEFNTK 578
CC T + I+ ++ + + K
Sbjct: 270 CCGTTPHYIKLVKEAVKDLKPK 291
>gi|400597816|gb|EJP65540.1| homocysteine S-methyltransferase [Beauveria bassiana ARSEF 2860]
Length = 361
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 111/281 (39%), Gaps = 59/281 (20%)
Query: 5 CKVKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
C V +LDG TS +++ K PLWSS L ++P DF R D++ ++
Sbjct: 3 CPVLILDGGLGTSLEQKYSCKFDHRTPLWSSDLLVSDPALLERCQADFGRVPVDVLLTAT 62
Query: 64 YQANVDNLTKL-----------GYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFN 112
YQ +V + G + ++V++ + A +
Sbjct: 63 YQVSVAGFARTRTRTSSPAHPDGIPRARIPHYIREAVRIAHRAATE-------------- 108
Query: 113 LLTGHIETAASIGPYGTVLRDGSEYSGHYVDS-MTEADLIAWHRPNVEALVRAGVD---- 167
G I A S+GPYG + EYSG Y D+ +E L AWHR + AL A V+
Sbjct: 109 ---GRI--ALSVGPYGACMTPSQEYSGAYDDAHSSEEALYAWHRDRL-ALFAAAVEGCDE 162
Query: 168 ------YLALETIPAEKEALALVKLLRE--------------FPGQKAWLS-FSCKDDTH 206
++ALET+P E +A+ + L W+S DD
Sbjct: 163 AARRIGFVALETVPRVDEIVAMRRALAAAAAAAAAAATSSGPLAAVPCWVSCLFPGDDEC 222
Query: 207 TSHGELISSAVTSCLLANP-DQIQAIGVNCVRPSHVSTLVR 246
G + +AV + L P +G+NC + + L+R
Sbjct: 223 LPDGSSVEAAVRAMLDPTPAPPAWGVGINCTKVHKLDALLR 263
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 144/365 (39%), Gaps = 72/365 (19%)
Query: 265 VKLLDGSF-TSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS---- 319
V +LDG TS +++ K PLWSS L ++P DF R ++ +
Sbjct: 5 VLILDGGLGTSLEQKYSCKFDHRTPLWSSDLLVSDPALLERCQADFGRVPVDVLLTATYQ 64
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAAS 379
+ G S + D + A + + R V RA + + A S
Sbjct: 65 VSVAGFARTRTRTSSPAHPDGIPRARIPHYIREAVRIAHRAATE----------GRIALS 114
Query: 380 IGPYGTVLRDGSEYSGHYVDS-MTEADLIAWHRPNVEALVRAGVD----------YLALE 428
+GPYG + EYSG Y D+ +E L AWHR + AL A V+ ++ALE
Sbjct: 115 VGPYGACMTPSQEYSGAYDDAHSSEEALYAWHRDRL-ALFAAAVEGCDEAARRIGFVALE 173
Query: 429 TIPAEKEALALVKLLRE--------------FPGQKAWLS-FSCKDDTHTSHGELISSAV 473
T+P E +A+ + L W+S DD G + +AV
Sbjct: 174 TVPRVDEIVAMRRALAAAAAAAAAAATSSGPLAAVPCWVSCLFPGDDECLPDGSSVEAAV 233
Query: 474 TSCLLANP-DQIQAIGVNCVRPSHVSTLVR-------CIKQSHPTVQT------IVYPN- 518
+ L P +G+NC + + L+R +++ + T ++YP+
Sbjct: 234 RAMLDPTPAPPAWGVGINCTKVHKLDALLRKYEAAVEKLRREEEGMATEAWPALVLYPDG 293
Query: 519 -KGGVWDSVHMKWLDTEDEYSILHYVP--QWLEEGVN-----------IIGGCCEVTSYE 564
G V+++V W ++++E P + L E V ++GGCC + +
Sbjct: 294 TNGEVYNTVTQTW-ESKEEAGAAERGPWAKQLAEVVRATRRRGRWRQIVVGGCCMAGAED 352
Query: 565 IQQMR 569
I +R
Sbjct: 353 IAALR 357
>gi|108758587|ref|YP_634291.1| homocysteine S-methyltransferase domain-containing protein
[Myxococcus xanthus DK 1622]
gi|108462467|gb|ABF87652.1| homocysteine S-methyltransferase domain protein [Myxococcus xanthus
DK 1622]
Length = 326
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 46/288 (15%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP-EACVETHRDF----IRAG-ADIIQSS 62
L +GS ++ RH +D H +S+ L E EA +RD+ +R G ++ +
Sbjct: 21 LTEGSVVERLRRHPAGLLDPHVANASLLLEPEGREALAAIYRDYRDIGLRHGLPTLLLTP 80
Query: 63 CYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAA 122
++AN + L + G + + D+ ++V+L+ +D+ G ET
Sbjct: 81 TWRANAERLARAGLAGR---DVFTEAVRLLAGLRDE----------------LGERETRV 121
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA--EKEA 180
+G G V G Y +++ + A+H P+VEAL RAGVD+L + +PA E E
Sbjct: 122 FVG--GLVGCRGDAY--QPAEALPRREAAAFHAPHVEALSRAGVDFLVAQALPALSEAEG 177
Query: 181 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPD-QIQAIGVNCVRPS 239
LAL + R G LSF + G ++ AV + A PD + A VNCV PS
Sbjct: 178 LALA-MART--GAPFLLSFVLRPTGTLLDGTPLAEAVAR-IDALPDARPTAYMVNCVHPS 233
Query: 240 HVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGH 287
+ + + Q P+ G +++ + SR + +++DG
Sbjct: 234 --------VFREGLSHQLAASPSLGARVV--GLQANTSRLSPEELDGR 271
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 130/338 (38%), Gaps = 60/338 (17%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP-EACVETHRDFIRGHIETAASI 320
N L +GS ++ RH +D H +S+ L E EA +RD+
Sbjct: 16 NAPRMLTEGSVVERLRRHPAGLLDPHVANASLLLEPEGREALAAIYRDY----------- 64
Query: 321 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG----------VDYLALIKP 370
RD G +T W R N E L RAG V LA ++
Sbjct: 65 -------RDIGLRHGLPTLLLTPT----W-RANAERLARAGLAGRDVFTEAVRLLAGLRD 112
Query: 371 SISS-QTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 429
+ +T +G G V G Y +++ + A+H P+VEAL RAGVD+L +
Sbjct: 113 ELGERETRVFVG--GLVGCRGDAY--QPAEALPRREAAAFHAPHVEALSRAGVDFLVAQA 168
Query: 430 IPA--EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPD-QIQA 486
+PA E E LAL + R G LSF + G ++ AV + A PD + A
Sbjct: 169 LPALSEAEGLALA-MART--GAPFLLSFVLRPTGTLLDGTPLAEAVAR-IDALPDARPTA 224
Query: 487 IGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQ- 545
VNCV PS + + P++ V G+ + + D + L P
Sbjct: 225 YMVNCVHPSVFREGLSHQLAASPSLGARVV----GLQANTSRLSPEELDGRAELDCAPPD 280
Query: 546 ---------WLEEGVNIIGGCCEVTSYEIQQMRIMIDE 574
E G ++GGCC I + ++ E
Sbjct: 281 AFAREMARVHAELGTRVLGGCCGTDERHIAALAGILTE 318
>gi|374106024|gb|AEY94934.1| FABL125Wp [Ashbya gossypii FDAG1]
Length = 336
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 5/194 (2%)
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL-VRAGVDYLALETIPAEKEA 436
SIG +G + +E++G Y D +A+ +P ++ + +D + ETIP E
Sbjct: 124 GSIGAWGAHV--CAEFTGDYGPRPDHIDYLAYFKPQLDNFNAQPALDLIGFETIPNAHEL 181
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP--DQIQAIGVNCVRP 494
A++ + +++ S D G ++ A P +G+NC
Sbjct: 182 RAILSWDESVIAKPFYVALSVHDAGTLRDGTPMADVAAIVAAAAPLNPNFLGLGINCSSL 241
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554
S ++ + P + +YPN G ++D V W + V ++ G II
Sbjct: 242 SRTPAILAELHALLPALPMTIYPNSGEIYDPVKKVWNASPHVVDWGAVVASYIRSGARII 301
Query: 555 GGCCEVTSYEIQQM 568
GGCC T +I+Q+
Sbjct: 302 GGCCRTTPNDIRQI 315
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 37/274 (13%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYL----------TTEPEACVETHRDFIRAG 55
+V ++DG +++ I V P+WS+ + E RDF+ AG
Sbjct: 16 RVLVMDGGQGTELENRGI--VVASPVWSAAPFLDAAAWQQPDSRERAIVASVLRDFVAAG 73
Query: 56 ADIIQSSCYQANVDNLT-KLGYSE-QEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNL 113
A++I + YQA+ ++T G + Q+ LL + V +E D L
Sbjct: 74 AEVIMTITYQASFTSVTTNTGITTLQDYNALLDRIVGFC-----RETVGDDKYL------ 122
Query: 114 LTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL-VRAGVDYLALE 172
SIG +G + +E++G Y D +A+ +P ++ + +D + E
Sbjct: 123 -------VGSIGAWGAHV--CAEFTGDYGPRPDHIDYLAYFKPQLDNFNAQPALDLIGFE 173
Query: 173 TIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP--DQIQA 230
TIP E A++ + +++ S D G ++ A P
Sbjct: 174 TIPNAHELRAILSWDESVIAKPFYVALSVHDAGTLRDGTPMADVAAIVAAAAPLNPNFLG 233
Query: 231 IGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+G+NC S ++ + P + +YPN G
Sbjct: 234 LGINCSSLSRTPAILAELHALLPALPMTIYPNSG 267
>gi|407404935|gb|EKF30189.1| cytidine triphosphate synthase, putative, partial [Trypanosoma
cruzi marinkellei]
Length = 439
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 128/342 (37%), Gaps = 64/342 (18%)
Query: 3 KICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSS 62
++ V + DG+ + + + +WSS L +E + HR +I AG D++ +
Sbjct: 34 QVTGVLIKDGATGTLLESWDVDYAKAGSMWSSSVLLSEMDLVKRAHRAYIDAGCDVLLTC 93
Query: 63 CYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIET-- 120
YQ + + S+ +L+ ++VQ+ + Q + TG I+
Sbjct: 94 TYQMHEEGCAA---SKVTMCELVDRAVQVARHTMPPQKQKGTTEESTAKERRTGGIDVFR 150
Query: 121 -----------------AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA-LV 162
A S+GPYG +L G EY G Y S+ E + A+H +EA L
Sbjct: 151 SALSSIKENGRERVVLLAGSLGPYGALLPGGQEYLGEY--SIHETVINAFHARRLEAFLC 208
Query: 163 RAG------VDYLALETIPAEKEALALV------KLLREFPGQKAWLSFSCKD------- 203
+ G VD+ LET P EAL ++ ++LR P ++++ K+
Sbjct: 209 QVGEKHTFKVDFFLLETFPRLDEALGILSFVNQHEILRTAPFCFSFIAAPVKNPLPENAD 268
Query: 204 -------------DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 250
G A++ + +G NC P VS + + Q
Sbjct: 269 DDALDDWWNAAASSIRLPDGNTFEEALSELRKNCGTALVGVGCNCSGPLEVSLVATALLQ 328
Query: 251 SH------PTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDG 286
P V ++YPN G DG + + +G
Sbjct: 329 KRRQDTEGPLV-LLLYPNSGETFTDGQWRKSPQQKQTSTAEG 369
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 100/269 (37%), Gaps = 74/269 (27%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA-LVRAG------VDYLALET 429
A S+GPYG +L G EY G Y S+ E + A+H +EA L + G VD+ LET
Sbjct: 168 AGSLGPYGALLPGGQEYLGEY--SIHETVINAFHARRLEAFLCQVGEKHTFKVDFFLLET 225
Query: 430 IPAEKEALALV------KLLREFPGQKAWLSFSCKD--------------------DTHT 463
P EAL ++ ++LR P ++++ K+
Sbjct: 226 FPRLDEALGILSFVNQHEILRTAPFCFSFIAAPVKNPLPENADDDALDDWWNAAASSIRL 285
Query: 464 SHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSH------PTVQTIVYP 517
G A++ + +G NC P VS + + Q P V ++YP
Sbjct: 286 PDGNTFEEALSELRKNCGTALVGVGCNCSGPLEVSLVATALLQKRRQDTEGPLV-LLLYP 344
Query: 518 NKG-----GVW-DSVHMKWLDTEDEYSI-----------------LHYVPQWLEEG---- 550
N G G W S K T + SI + ++ Q L++
Sbjct: 345 NSGETFTDGQWRKSPQQKQTSTAEGLSIRDLQRILARGDGDLIIYMKFLLQLLQQRSEAT 404
Query: 551 -----VNIIGGCCEVTSYEIQQMRIMIDE 574
+ + G CC T +I ++ + E
Sbjct: 405 EWLFEIIVCGACCRSTPEDIAALKQVARE 433
>gi|380494649|emb|CCF32990.1| homocysteine S-methyltransferase [Colletotrichum higginsianum]
Length = 357
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 145/351 (41%), Gaps = 54/351 (15%)
Query: 265 VKLLDGSF-TSQVSRHTIK-DVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
V +LDG TS ++ IK + PLWS+ L + + +DF G + P
Sbjct: 13 VLILDGGLGTSLEDKYNIKFESATTPLWSTHLLVDGQDTLLACQKDF--GDV-------P 63
Query: 323 YGTVLRDGSEYSGH-YVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
+L + S H + + T R + ++ + + +S+TA S+G
Sbjct: 64 VDIILTATYQLSIHGFASTRTAKYPQGIDRATIGNFIQDAIRIAHEAGRTQASKTALSVG 123
Query: 382 PYGTVLRDGSEYSGHYVDSMTEAD-LIAWHRPNVEALVRAG-----VDYLALETIPAEKE 435
PYG + G EYSG Y D L WH ++ AG V Y+A+ETIP E
Sbjct: 124 PYGACMIPGQEYSGAYDAEHDSLDKLREWHLERLQLFKDAGAFASPVSYVAVETIPRADE 183
Query: 436 ALALVKLLRE---FPGQKA---WL-SFSCKDDTHTSHGELISSAVTSCLLANPD----QI 484
A+ + L E Q + W+ S ++D G I AV + L +PD +
Sbjct: 184 IKAVRQALDESGVLATQASIPFWIASLFPREDECLPDGSSIKEAVXAML--SPDVATSRP 241
Query: 485 QAIGVNCVRPSHVSTLVRCIKQSHPTV----------QTIVYPN--KGGVWDSVHMKWLD 532
IG+NC + + +LV+ + + + I+YP+ G V+++ KW
Sbjct: 242 WGIGINCTKVWKLESLVKGYESAVQGLIDDGAIAEAPALILYPDGTNGEVYNTTTQKWEL 301
Query: 533 TED--------EYSILHYVPQWLEEGV---NIIGGCCEVTSYEIQQMRIMI 572
E E + V G+ ++GGCC+ + +I ++R +
Sbjct: 302 PEGSSHPATSWETQLSQVVANAQSRGLWKQIVVGGCCKASHSDISRLRTAV 352
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 113/274 (41%), Gaps = 59/274 (21%)
Query: 6 KVKLLDGSF-TSQVSRHTIK-DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+V +LDG TS ++ IK + PLWS+ L + + +DF DII ++
Sbjct: 12 RVLILDGGLGTSLEDKYNIKFESATTPLWSTHLLVDGQDTLLACQKDFGDVPVDIILTAT 71
Query: 64 YQANVDNLTK--------------LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNK 109
YQ ++ +G Q+A+ + H++ + S
Sbjct: 72 YQLSIHGFASTRTAKYPQGIDRATIGNFIQDAIRIAHEAGRTQAS--------------- 116
Query: 110 TFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD-LIAWHRPNVEALVRAG--- 165
+TA S+GPYG + G EYSG Y D L WH ++ AG
Sbjct: 117 ---------KTALSVGPYGACMIPGQEYSGAYDAEHDSLDKLREWHLERLQLFKDAGAFA 167
Query: 166 --VDYLALETIPAEKEALALVKLLRE---FPGQKA---WL-SFSCKDDTHTSHGELISSA 216
V Y+A+ETIP E A+ + L E Q + W+ S ++D G I A
Sbjct: 168 SPVSYVAVETIPRADEIKAVRQALDESGVLATQASIPFWIASLFPREDECLPDGSSIKEA 227
Query: 217 VTSCLLANPD----QIQAIGVNCVRPSHVSTLVR 246
V + L +PD + IG+NC + + +LV+
Sbjct: 228 VXAML--SPDVATSRPWGIGINCTKVWKLESLVK 259
>gi|367013957|ref|XP_003681478.1| hypothetical protein TDEL_0E00240 [Torulaspora delbrueckii]
gi|359749139|emb|CCE92267.1| hypothetical protein TDEL_0E00240 [Torulaspora delbrueckii]
Length = 328
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 7/204 (3%)
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEA 436
S+GP+ + SEY+G Y D +++P ++ + +D + +ET+P E
Sbjct: 123 GSVGPWAAY--NASEYTGDYGLHADSIDYYGYYKPQLDNFNKQEEIDMIGIETVPNFHEL 180
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELIS--SAVTSCLLANPD-QIQAIGVNCVR 493
A++ + + ++S + D G + + CL N + +G+NCV
Sbjct: 181 KAILSWDEKKIAKPFYVSLTTHDSGVLRDGTAMEDIAQYIKCLGNNLNPNFMLLGINCVS 240
Query: 494 PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE-DEYSILHYVPQWLEEGVN 552
+ ++ + + P + + YPN G V++ WL + S V ++ G
Sbjct: 241 FNDSRDILELLHNALPEMLLLAYPNSGEVYEPKKKIWLANKCKTTSWDSVVKSFINSGAR 300
Query: 553 IIGGCCEVTSYEIQQMRIMIDEFN 576
IIGGCC + +I + I + +++
Sbjct: 301 IIGGCCRTSPQDIADVSIAVKKYS 324
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 114/273 (41%), Gaps = 34/273 (12%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP----------EACVETHRDFIRAG 55
K+ +LDG +++ I+ +P+WSS+ +E + E ++DF+ +G
Sbjct: 15 KILVLDGGQGTEMENRGIEV--ANPVWSSIPFVSESFWTDEWSKERKIVEEIYKDFMSSG 72
Query: 56 ADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLT 115
+D++ + YQA+ + +E L L + L+ D + + +
Sbjct: 73 SDMLMTVTYQASFKAI-----AENTELQTLSEYNSLL-----------DRIVAFSRRCIG 116
Query: 116 GHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETI 174
S+GP+ + SEY+G Y D +++P ++ + +D + +ET+
Sbjct: 117 DERYLVGSVGPWAAY--NASEYTGDYGLHADSIDYYGYYKPQLDNFNKQEEIDMIGIETV 174
Query: 175 PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELIS--SAVTSCLLANPD-QIQAI 231
P E A++ + + ++S + D G + + CL N + +
Sbjct: 175 PNFHELKAILSWDEKKIAKPFYVSLTTHDSGVLRDGTAMEDIAQYIKCLGNNLNPNFMLL 234
Query: 232 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
G+NCV + ++ + + P + + YPN G
Sbjct: 235 GINCVSFNDSRDILELLHNALPEMLLLAYPNSG 267
>gi|339899403|ref|XP_001470006.2| putative homocysteine S-methyltransferase [Leishmania infantum
JPCM5]
gi|321398811|emb|CAM73127.2| putative homocysteine S-methyltransferase, partial [Leishmania
infantum JPCM5]
Length = 199
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 14/141 (9%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V +LDG +++ +D PLWS L P+ + ++RAGA I ++ YQ
Sbjct: 69 QVVMLDGGLATELETRGCDLLD--PLWSGKVLLESPQRIRDVALAYLRAGARCIITASYQ 126
Query: 66 ANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKE-NQTPDINLNKTFNLLTGHIETAAS 123
+L + G +E A+ + +SV++ S +++ + P + A S
Sbjct: 127 ITPQSLMEHRGLTEDAAVAAIEESVRIAQSVRERHLKEKPQ----------AAPVFVAGS 176
Query: 124 IGPYGTVLRDGSEYSGHYVDS 144
+GPYG L DGSEY G YV S
Sbjct: 177 VGPYGAYLADGSEYRGDYVRS 197
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 57/140 (40%), Gaps = 9/140 (6%)
Query: 261 PNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASI 320
PN+ V +LDG +++ +D PLWS L P+ + ++R +
Sbjct: 67 PNQ-VVMLDGGLATELETRGCDLLD--PLWSGKVLLESPQRIRDVALAYLRAGARCIIT- 122
Query: 321 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASI 380
Y + E+ G +TE +A +V +L + A S+
Sbjct: 123 ASYQITPQSLMEHRG-----LTEDAAVAAIEESVRIAQSVRERHLKEKPQAAPVFVAGSV 177
Query: 381 GPYGTVLRDGSEYSGHYVDS 400
GPYG L DGSEY G YV S
Sbjct: 178 GPYGAYLADGSEYRGDYVRS 197
>gi|134100433|ref|YP_001106094.1| 5-methyltetrahydrofolate:homocysteine S-methyltransferase
[Saccharopolyspora erythraea NRRL 2338]
gi|291007313|ref|ZP_06565286.1| putative 5-methyltetrahydrofolate:homocysteine S-methyltransferase
[Saccharopolyspora erythraea NRRL 2338]
gi|133913056|emb|CAM03169.1| putative 5-methyltetrahydrofolate:homocysteine S-methyltransferase
[Saccharopolyspora erythraea NRRL 2338]
Length = 1189
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 103/235 (43%), Gaps = 30/235 (12%)
Query: 39 TEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK 98
T P+ +R F+ AG+D I+++ + N+ NL + G E+ DL K +L A D
Sbjct: 53 TRPDVVSSVYRGFLEAGSDAIETNTFGTNLANLGEYGIPER-IRDLAEKGTRLAREAAD- 110
Query: 99 ENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNV 158
E TPD F L S+GP GT L GH ADL + NV
Sbjct: 111 EYSTPD---KPRFVL--------GSMGP-GTKL----PTLGH----APYADLRDAYVENV 150
Query: 159 EALVRAGVDYLALET---IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISS 215
++ G+D + +ET + K A+ K E G+ WL + + L+ S
Sbjct: 151 LGMIDGGIDVVLVETSQDLLQTKAAIVAAKRAMEQTGR--WLPIIAQVTVEQTGTMLVGS 208
Query: 216 AVTSCLLA-NPDQIQAIGVNCVR-PSHVSTLVRCIKQSHPTVQTIVYPNKGVKLL 268
+ + L A P I IG+NC P+ +S +R + Q H V V PN G+ L
Sbjct: 209 EIGAALTALEPLGIDMIGMNCATGPAEMSEHLRVLSQ-HARVPISVMPNAGLPEL 262
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 16/172 (9%)
Query: 404 ADLIAWHRPNVEALVRAGVDYLALET---IPAEKEALALVKLLREFPGQKAWLSFSCKDD 460
ADL + NV ++ G+D + +ET + K A+ K E G+ WL +
Sbjct: 140 ADLRDAYVENVLGMIDGGIDVVLVETSQDLLQTKAAIVAAKRAMEQTGR--WLPIIAQVT 197
Query: 461 THTSHGELISSAVTSCLLA-NPDQIQAIGVNCVR-PSHVSTLVRCIKQSHPTVQTIVYPN 518
+ L+ S + + L A P I IG+NC P+ +S +R + Q H V V PN
Sbjct: 198 VEQTGTMLVGSEIGAALTALEPLGIDMIGMNCATGPAEMSEHLRVLSQ-HARVPISVMPN 256
Query: 519 KG----GVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQ 566
G G +V+ D E ++ +V + G ++GGCC T ++
Sbjct: 257 AGLPELGPNGAVYPLKADELAE-ALAGFVTNF---GARLVGGCCGTTGEHVR 304
>gi|119511447|ref|ZP_01630558.1| 5-methyltetrahydrofolate--homocysteine S-methyltransferase
[Nodularia spumigena CCY9414]
gi|119463912|gb|EAW44838.1| 5-methyltetrahydrofolate--homocysteine S-methyltransferase
[Nodularia spumigena CCY9414]
Length = 1184
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 140/335 (41%), Gaps = 48/335 (14%)
Query: 251 SHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD-GHPLWSSV--YLT-TEPEACVETH 306
+HP ++ + PN+ V + DG+ + + + D G P + YL T PEA + H
Sbjct: 2 THPFLEHLHSPNRPVIVFDGAMGTNLQSQNLTAEDFGGPQYEGCNEYLVHTNPEAVAKVH 61
Query: 307 RDFIRGH---IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAW-HRPNVEALVRAGV 362
RDF+ IET + G VL +EY AD + ++ VE R
Sbjct: 62 RDFLAAGADVIETD-TFGATSIVL---AEYD--------LADQTYYLNKTAVEIAKRVAA 109
Query: 363 DYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGV 422
++ KP A S+GP + G ++D T L A EAL GV
Sbjct: 110 EFSTPEKPRF---VAGSLGPTTKLPTLG------HIDFDT---LKANFAEQAEALFDGGV 157
Query: 423 DYLALET---IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGE-LISSAVTSCL- 477
D +ET + K AL ++ + G + L S T S G L+ S + + L
Sbjct: 158 DLFLVETCQDVLQIKAALNGIEEVFAKKGDRRPLMVSV---TMESMGTMLVGSEINAVLT 214
Query: 478 LANPDQIQAIGVNCVR-PSHVSTLVRCIKQSHPTVQTIVYPNKG---GVWDSVHMKWLDT 533
+ P I +G+NC P + ++ + + P + + + PN G V H +
Sbjct: 215 ILAPYPIDILGLNCATGPDLMKPHIKYLSEHSPFIVSCI-PNAGLPENVGGQAHYRLTPM 273
Query: 534 EDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
E +++H+V GV +IGGCC IQQ+
Sbjct: 274 ELRMALMHFVEDL---GVQVIGGCCGTRPEHIQQL 305
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 113/269 (42%), Gaps = 36/269 (13%)
Query: 7 VKLLDGSFTSQVSRHTIKDVD-GHPLWSSV--YLT-TEPEACVETHRDFIRAGADIIQSS 62
V + DG+ + + + D G P + YL T PEA + HRDF+ AGAD+I++
Sbjct: 16 VIVFDGAMGTNLQSQNLTAEDFGGPQYEGCNEYLVHTNPEAVAKVHRDFLAAGADVIETD 75
Query: 63 CYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAA 122
+ A L + ++Q L+K+ + E TP+ F A
Sbjct: 76 TFGATSIVLAEYDLADQTY--YLNKTAVEIAKRVAAEFSTPE---KPRF--------VAG 122
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET---IPAEKE 179
S+GP + G ++D T L A EAL GVD +ET + K
Sbjct: 123 SLGPTTKLPTLG------HIDFDT---LKANFAEQAEALFDGGVDLFLVETCQDVLQIKA 173
Query: 180 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGE-LISSAVTSCL-LANPDQIQAIGVNCVR 237
AL ++ + G + L S T S G L+ S + + L + P I +G+NC
Sbjct: 174 ALNGIEEVFAKKGDRRPLMVSV---TMESMGTMLVGSEINAVLTILAPYPIDILGLNCAT 230
Query: 238 -PSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
P + ++ + + P + + + PN G+
Sbjct: 231 GPDLMKPHIKYLSEHSPFIVSCI-PNAGL 258
>gi|254586065|ref|XP_002498600.1| ZYRO0G14212p [Zygosaccharomyces rouxii]
gi|238941494|emb|CAR29667.1| ZYRO0G14212p [Zygosaccharomyces rouxii]
Length = 325
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-AGVDYLALETIPAEKE 435
SIGPY + G+EY+G Y E D + P V R +D + LET+P E
Sbjct: 122 VGSIGPYAAHV--GAEYTGDYGPKPEEIDYWQYFEPQVANFNRNETIDIIGLETVPNVHE 179
Query: 436 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495
+++ + ++S DD + G + V + + +G+NC S
Sbjct: 180 LKSILSWDETKISKPFYVSLCVGDDGNLRDGTPLEQLVPLFANRSNKNLLLVGINCCSLS 239
Query: 496 HVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKW-----LDTEDEYSILHYVPQWLE 548
S + + + + + +VYPN G ++D W LD+ S V ++ +
Sbjct: 240 VSSQALSHLNEILASTPMGLLVYPNSGEIYDHKTQTWSRPTGLDSH-RLSWPSLVQEYRK 298
Query: 549 EGVNIIGGCCEVTSYEIQQMRIMIDE 574
G IGGCC T +IQ++ ++D
Sbjct: 299 FGARAIGGCCRTTPLDIQEICKVVDR 324
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 107/273 (39%), Gaps = 34/273 (12%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVE---THRD--------FIRA 54
+V ++DG +++ + ++ G P+WS+V T E + T RD ++ A
Sbjct: 14 RVLVMDGGQGTELENRGM-NISG-PIWSTVPFTKEEFWNFDQPYTDRDVVNSMFKAYVDA 71
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLL 114
GA ++ + YQ + + H + + + +Q D + +
Sbjct: 72 GAQLLSTVTYQTSYKTICA------------HTDIH----TRTQYDQLLDRIVGFCRRCI 115
Query: 115 TGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-AGVDYLALET 173
SIGPY + G+EY+G Y E D + P V R +D + LET
Sbjct: 116 GDDHYLVGSIGPYAAHV--GAEYTGDYGPKPEEIDYWQYFEPQVANFNRNETIDIIGLET 173
Query: 174 IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGV 233
+P E +++ + ++S DD + G + V + + +G+
Sbjct: 174 VPNVHELKSILSWDETKISKPFYVSLCVGDDGNLRDGTPLEQLVPLFANRSNKNLLLVGI 233
Query: 234 NCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKG 264
NC S S + + + + + +VYPN G
Sbjct: 234 NCCSLSVSSQALSHLNEILASTPMGLLVYPNSG 266
>gi|45185105|ref|NP_982822.1| ABL125Wp [Ashbya gossypii ATCC 10895]
gi|44980741|gb|AAS50646.1| ABL125Wp [Ashbya gossypii ATCC 10895]
Length = 336
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 80/194 (41%), Gaps = 5/194 (2%)
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL-VRAGVDYLALETIPAEKEA 436
SIG +G + +E++G Y D +A+ +P ++ + +D + ETIP E
Sbjct: 124 GSIGAWGAHV--CAEFTGDYGPRPDHIDYLAYFKPQLDNFNAQPALDLIGFETIPNAHEL 181
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP--DQIQAIGVNCVRP 494
A++ + +++ S D G ++ A P +G+NC
Sbjct: 182 RAILSWDESVIAKPFYVALSVHDAGTLRDGTPMADVAAIVAAAAPLNPNFLGLGINCSSL 241
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554
S ++ + P + +YPN G ++D V W + V ++ G II
Sbjct: 242 SRTPAILAELHALLPALPMTIYPNSGEIYDPVKKVWNASPHVVDWGAVVASYIRSGARII 301
Query: 555 GGCCEVTSYEIQQM 568
GGCC +I+Q+
Sbjct: 302 GGCCRTIPNDIRQI 315
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 37/274 (13%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYL----------TTEPEACVETHRDFIRAG 55
+V ++DG +++ I V P+WS+ + E RDF+ AG
Sbjct: 16 RVLVMDGGQGTELENRGI--VVASPVWSAAPFLDAAAWQQPDSRERAIVASVLRDFVAAG 73
Query: 56 ADIIQSSCYQANVDNLT-KLGYSE-QEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNL 113
A++I + YQA+ ++T G + Q+ LL + V +E D L
Sbjct: 74 AEVIMTITYQASFTSVTTNTGITTLQDYNALLDRIVGFC-----RETVGDDKYL------ 122
Query: 114 LTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL-VRAGVDYLALE 172
SIG +G + +E++G Y D +A+ +P ++ + +D + E
Sbjct: 123 -------VGSIGAWGAHV--CAEFTGDYGPRPDHIDYLAYFKPQLDNFNAQPALDLIGFE 173
Query: 173 TIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP--DQIQA 230
TIP E A++ + +++ S D G ++ A P
Sbjct: 174 TIPNAHELRAILSWDESVIAKPFYVALSVHDAGTLRDGTPMADVAAIVAAAAPLNPNFLG 233
Query: 231 IGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+G+NC S ++ + P + +YPN G
Sbjct: 234 LGINCSSLSRTPAILAELHALLPALPMTIYPNSG 267
>gi|319789589|ref|YP_004151222.1| homocysteine S-methyltransferase [Thermovibrio ammonificans HB-1]
gi|317114091|gb|ADU96581.1| homocysteine S-methyltransferase [Thermovibrio ammonificans HB-1]
Length = 841
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 117/273 (42%), Gaps = 44/273 (16%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K+ +LDG + + + DV+ P +V +PE E H +++ AGADII+++ +
Sbjct: 11 KIWVLDGGMGTMLMAKGV-DVNFAPELLNV---EKPEVLKEIHSEYVEAGADIIETNTFG 66
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
+N L+ G E +L V+L A G A S+G
Sbjct: 67 SNRIKLSHYGL-ENRVKELTAAGVKLAKEAA------------------RGRALVALSVG 107
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
P G +E G Y T +L+ + +EA AG D + +ET+ KEA A V
Sbjct: 108 PTGVF----AEPVGDY----TFDELVDVFKEQIEAGAEAGADLVLIETMSDIKEAKAAVF 159
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGEL--ISSAVTSCLLANPDQIQAIGVNC-VRPSHVS 242
RE +S + ++D T G +++AV + A+G NC + P
Sbjct: 160 AAREVCDLPVLVSMTYQEDGRTLLGTPPEVAAAVFEGF-----NVAAVGANCSLGP---E 211
Query: 243 TLVRCIKQSHPTVQT--IVYPNKGVKLLDGSFT 273
+ V IK++ T IVY N G+ +L+ T
Sbjct: 212 SFVEIIKRTASVTTTPIIVYANAGLPVLENGKT 244
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S+GP G +E G Y T +L+ + +EA AG D + +ET+ KEA
Sbjct: 103 ALSVGPTGVF----AEPVGDY----TFDELVDVFKEQIEAGAEAGADLVLIETMSDIKEA 154
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGEL--ISSAVTSCLLANPDQIQAIGVNC-VR 493
A V RE +S + ++D T G +++AV + A+G NC +
Sbjct: 155 KAAVFAAREVCDLPVLVSMTYQEDGRTLLGTPPEVAAAVFEGF-----NVAAVGANCSLG 209
Query: 494 PSHVSTLVRCIKQSHPTVQT--IVYPNKG-GVWDSVHMKWLDTEDEYSILHYVPQWLEEG 550
P + V IK++ T IVY N G V ++ + + + + Y ++++ G
Sbjct: 210 P---ESFVEIIKRTASVTTTPIIVYANAGLPVLENGKTVYPEPPETFE--KYAVEFVKAG 264
Query: 551 VNIIGGCCEVTSYEIQQMRIMID 573
NIIGGCC T I+ ++ ++
Sbjct: 265 ANIIGGCCGTTPDHIRAIKRAVE 287
>gi|146296189|ref|YP_001179960.1| homocysteine S-methyltransferase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409765|gb|ABP66769.1| homocysteine S-methyltransferase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 411
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 125/282 (44%), Gaps = 61/282 (21%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
KV + DG+ +Q+ ++ +K+ + LWS T PE + HRD+ AG+D ++++ +
Sbjct: 9 KVLVFDGAMGTQLIQNGLKENECPDLWS----VTRPEVIAKIHRDYFEAGSDCVETNTFG 64
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
AN + L K G + ++ ++K+ L+ AKD + G++ S+G
Sbjct: 65 ANREKLKKYGLENE--VEKINKAAILL--AKDVAKE------------YGGYV--GLSVG 106
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
P G ++R + EA+ + + + + A + AG D++++ET+ KEA A
Sbjct: 107 PTGRLMRPSGDL------DFDEAESVFYEQ--ILAGIEAGADFISIETMSDIKEAKA--- 155
Query: 186 LLREFPGQKAWLSFS-CKDDTHTSHGELISSAV---TSCLLANPDQIQA----------I 231
A+L++ K++ + L+S L+ P ++ A +
Sbjct: 156 ---------AFLAYKRAKENANKDVACLVSLTFEENKRLLMGTPPEVAAYFFSFIGADLV 206
Query: 232 GVNCVRPSHVSTLVRCIK--QSHPTVQTIVYPNKGV-KLLDG 270
G NC L+ IK V PN G+ K++DG
Sbjct: 207 GANC--SGGAKQLLDVIKSMNGFSFVPLSTKPNAGLPKMIDG 246
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 119/318 (37%), Gaps = 71/318 (22%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
K V + DG+ +Q+ ++ +K+ + LWS T PE + HRD+
Sbjct: 8 KKVLVFDGAMGTQLIQNGLKENECPDLWS----VTRPEVIAKIHRDYFEA---------- 53
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPN-VEALVRAGVDYLALIKPSISSQTAASIG 381
GS+ L + N VE + +A + + S+G
Sbjct: 54 -------GSDCVETNTFGANREKLKKYGLENEVEKINKAAILLAKDVAKEYGGYVGLSVG 106
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
P G ++R + EA+ + + + + A + AG D++++ET+ KEA A
Sbjct: 107 PTGRLMRPSGDLD------FDEAESVFYEQ--ILAGIEAGADFISIETMSDIKEAKA--- 155
Query: 442 LLREFPGQKAWLSFS-CKDDTHTSHGELISSAV---TSCLLANPDQIQA----------I 487
A+L++ K++ + L+S L+ P ++ A +
Sbjct: 156 ---------AFLAYKRAKENANKDVACLVSLTFEENKRLLMGTPPEVAAYFFSFIGADLV 206
Query: 488 GVNCVRPSHVSTLVRCIK--QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYS--ILHY- 542
G NC L+ IK V PN G K +D + Y I +
Sbjct: 207 GANC--SGGAKQLLDVIKSMNGFSFVPLSTKPNAG------LPKMIDGKVVYEDCIADFE 258
Query: 543 --VPQWLEEGVNIIGGCC 558
++++ GV + GGCC
Sbjct: 259 SSTEEFIQSGVRLYGGCC 276
>gi|419840610|ref|ZP_14363998.1| homocysteine S-methyltransferase [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|386907553|gb|EIJ72260.1| homocysteine S-methyltransferase [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
Length = 317
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD--GHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
++ +LDG+ + + +++++ D G + T E +E H+ +I AGADII+++
Sbjct: 9 RILILDGAMGTVLQKYSLQSEDFCGAVGCYEILNETRAEIILEVHKKYIEAGADIIETNS 68
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
+ N +L E++A KS ++ A ++ + I S
Sbjct: 69 FNCNAISLKNYQL-EKKAYSFSKKSAEIARQAAEESGK---------------KIYVLGS 112
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GP L S Y +S++ +L A + + LV GV+ + +ETI A A
Sbjct: 113 VGPTNKSL-SFSLGDLPYQESLSFQELKAAYYEQILGLVDGGVNGILIETIFDGLNAKAA 171
Query: 184 VKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPD--QIQAIGVNC-VR 237
V E F + W+ C T G+L + L+ + D I + G NC
Sbjct: 172 VIAAEEVFAFRKKALWI---CISATVDKQGKLFTGQSMESLIFSLDGPSILSFGFNCSFG 228
Query: 238 PSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDV 284
H+ L++ I QS T +YPN G+ +G +T V I+D+
Sbjct: 229 AKHLVPLIQKI-QSCTTKYISLYPNAGLPNQNGDYTETV-EQMIEDL 273
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 15/187 (8%)
Query: 397 YVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE---FPGQKAWL 453
Y +S++ +L A + + LV GV+ + +ETI A A V E F + W+
Sbjct: 129 YQESLSFQELKAAYYEQILGLVDGGVNGILIETIFDGLNAKAAVIAAEEVFAFRKKALWI 188
Query: 454 SFSCKDDTHTSHGELISSAVTSCLLANPD--QIQAIGVNC-VRPSHVSTLVRCIKQSHPT 510
C T G+L + L+ + D I + G NC H+ L++ I QS T
Sbjct: 189 ---CISATVDKQGKLFTGQSMESLIFSLDGPSILSFGFNCSFGAKHLVPLIQKI-QSCTT 244
Query: 511 VQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYE-IQQMR 569
+YPN G + + + +T ++ I +P + VNI+GGCC TSYE I+ +
Sbjct: 245 KYISLYPNAG--LPNQNGDYTETVEQM-IEDLLPVIRNQKVNILGGCCG-TSYEYIRALA 300
Query: 570 IMIDEFN 576
++ E N
Sbjct: 301 KIVSEKN 307
>gi|119504304|ref|ZP_01626384.1| hypothetical protein MGP2080_00490 [marine gamma proteobacterium
HTCC2080]
gi|119459812|gb|EAW40907.1| hypothetical protein MGP2080_00490 [marine gamma proteobacterium
HTCC2080]
Length = 306
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 131/323 (40%), Gaps = 58/323 (17%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY- 323
+ LLDG ++ R + HPLWS + EPE HRDF + Y
Sbjct: 5 ITLLDGGMGQELIRRS-SAAKPHPLWSLQVMMDEPELVANVHRDFCLAGARVIC-LNTYS 62
Query: 324 --------GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ 375
G L D E H D R ++A G+D +A + P +S
Sbjct: 63 VTRHRLQMGNELPDLPELLKHAGD---------LARAGIQASGLHGIDVVASLPPLTASY 113
Query: 376 TAAS-IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 434
S + P T ++D EY +L+ R +V+ +LA ET+ +
Sbjct: 114 LKQSPLSP--TQMKD--EYK----------ELMELQRHHVDG-------FLA-ETLSSVA 151
Query: 435 EALALVKLLREFPGQKAWLSFSCKDDTHT--SHGELISSAVTSCLLANPDQIQAIGVNCV 492
E A+++ +E G L+F+ +D+ T GEL+ A+ +C+ P ++ +NC
Sbjct: 152 EGEAVLRAAQE-AGTGVHLAFTVQDEDGTLLRSGELLEDALRACVPLKP---LSVILNCS 207
Query: 493 RPSHVSTLVRCIKQSHPT-------VQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQ 545
P + + + Q+ ++ GG D + + T Y+ + Q
Sbjct: 208 IPEAIDQGLPLVAQATEIFGAYANGFHSVTALKPGGTVDVLTAREDLTPAAYTDMSL--Q 265
Query: 546 WLEEGVNIIGGCCEVTSYEIQQM 568
WLE G +I+GGCCEV I+ +
Sbjct: 266 WLELGASILGGCCEVGPAHIEAL 288
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 108/247 (43%), Gaps = 31/247 (12%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG ++ R + HPLWS + EPE HRDF AGA +I + Y
Sbjct: 5 ITLLDGGMGQELIRRS-SAAKPHPLWSLQVMMDEPELVANVHRDFCLAGARVICLNTYSV 63
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
L ++G + +LL + L A + + I++ + LT + + P
Sbjct: 64 TRHRL-QMGNELPDLPELLKHAGDLAR-AGIQASGLHGIDVVASLPPLTASYLKQSPLSP 121
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
T ++D EY +L+ R +V+ +LA ET+ + E A+++
Sbjct: 122 --TQMKD--EYK----------ELMELQRHHVDG-------FLA-ETLSSVAEGEAVLRA 159
Query: 187 LREFPGQKAWLSFSCKDDTHT--SHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
+E G L+F+ +D+ T GEL+ A+ +C+ P ++ +NC P +
Sbjct: 160 AQE-AGTGVHLAFTVQDEDGTLLRSGELLEDALRACVPLKP---LSVILNCSIPEAIDQG 215
Query: 245 VRCIKQS 251
+ + Q+
Sbjct: 216 LPLVAQA 222
>gi|220908876|ref|YP_002484187.1| methionine synthase [Cyanothece sp. PCC 7425]
gi|219865487|gb|ACL45826.1| methionine synthase [Cyanothece sp. PCC 7425]
Length = 1212
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 132/325 (40%), Gaps = 46/325 (14%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVD-GHPLWSSV--YLT-TEPEACVETHRDFIRGH-- 313
+P++ V + DG+ + + + D G P + YL T+PEA + HRDF+
Sbjct: 11 HPDRPVLVFDGAMGTNIQTQNLTAEDFGGPQYEGCNEYLVHTKPEAIAKVHRDFLAAGAD 70
Query: 314 -IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSI 372
IET + G VL + Y S T A+L + ++ KP
Sbjct: 71 VIETD-TFGSSPLVLAEYDLADQSYYLSKTAAELAK----------QCAAEFSTPEKPRF 119
Query: 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET--- 429
A SIGP GT L GH + L A E L GVD +ET
Sbjct: 120 ---VAGSIGP-GTKL----PTLGH----INYDQLKAAFTVQAEGLFDGGVDLFIIETCQD 167
Query: 430 IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA--NPDQIQAI 487
+ K AL V+ + E G++ L S T G ++ S +LA P I +
Sbjct: 168 VLQIKAALNAVEAVFEQKGERRPLMVSV---TMEVQGTMLVGTDISGVLAILEPYPIDIL 224
Query: 488 GVNCVR-PSHVSTLVRCIKQSHPTVQTIVYPNKG---GVWDSVHMKWLDTEDEYSILHYV 543
G+NC P ++ ++ + ++ P V + + PN G + H K E ++ +V
Sbjct: 225 GLNCATGPDRMADHIKYLTENAPFVVSCI-PNAGLPENIGGHAHYKLTPMELRLALHRFV 283
Query: 544 PQWLEEGVNIIGGCCEVTSYEIQQM 568
W GV +IGGCC IQ +
Sbjct: 284 EDW---GVQVIGGCCGTRPAHIQAL 305
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 115/269 (42%), Gaps = 36/269 (13%)
Query: 7 VKLLDGSFTSQVSRHTIKDVD-GHPLWSSV--YLT-TEPEACVETHRDFIRAGADIIQSS 62
V + DG+ + + + D G P + YL T+PEA + HRDF+ AGAD+I++
Sbjct: 16 VLVFDGAMGTNIQTQNLTAEDFGGPQYEGCNEYLVHTKPEAIAKVHRDFLAAGADVIETD 75
Query: 63 CYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAA 122
+ ++ L + ++Q L K+ + E TP+ F A
Sbjct: 76 TFGSSPLVLAEYDLADQSY--YLSKTAAELAKQCAAEFSTPE---KPRF--------VAG 122
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET---IPAEKE 179
SIGP GT L GH + L A E L GVD +ET + K
Sbjct: 123 SIGP-GTKL----PTLGH----INYDQLKAAFTVQAEGLFDGGVDLFIIETCQDVLQIKA 173
Query: 180 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA--NPDQIQAIGVNCVR 237
AL V+ + E G++ L S T G ++ S +LA P I +G+NC
Sbjct: 174 ALNAVEAVFEQKGERRPLMVSV---TMEVQGTMLVGTDISGVLAILEPYPIDILGLNCAT 230
Query: 238 -PSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
P ++ ++ + ++ P V + + PN G+
Sbjct: 231 GPDRMADHIKYLTENAPFVVSCI-PNAGL 258
>gi|427716286|ref|YP_007064280.1| methionine synthase [Calothrix sp. PCC 7507]
gi|427348722|gb|AFY31446.1| methionine synthase (B12-dependent) [Calothrix sp. PCC 7507]
Length = 1178
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 137/344 (39%), Gaps = 46/344 (13%)
Query: 251 SHPTVQTIVYPNKGVKLLDGSFTS--QVSRHTIKDVDGHPLWS-SVYLT-TEPEACVETH 306
+HP ++ + P V + DG+ + Q T +D G + YL T+PEA + H
Sbjct: 2 THPFLERLRSPELPVIVFDGAMGTNLQTQNLTAEDFGGAEYEGCNEYLVHTKPEAVAKVH 61
Query: 307 RDFIRGH---IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 363
RDF+ IET + G VL + Y S T A+L R +
Sbjct: 62 RDFLAAGADVIETD-TFGATSIVLAEYDLADQAYYLSKTAAELAK----------RVAAE 110
Query: 364 YLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 423
+ KP A SIGP + G ++D T + A EAL GVD
Sbjct: 111 FSTPEKPRF---VAGSIGPTTKLPTLG------HIDFDT---MKATFAEQAEALWDGGVD 158
Query: 424 YLALET---IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA- 479
+ET + K AL ++ + G + L S T S G ++ S +L
Sbjct: 159 LFLVETCQDVLQIKAALNGIEEVFAKKGDRRPLMVSV---TMESMGTMLVGTEISAVLTI 215
Query: 480 -NPDQIQAIGVNCVR-PSHVSTLVRCIKQSHPTVQTIVYPNKG---GVWDSVHMKWLDTE 534
P I +G+NC P + ++ + + P + + + PN G V H + E
Sbjct: 216 LEPYPIDILGLNCATGPDLMKPHIKYLAEHSPFIVSCI-PNAGLPENVGGQAHYRLTPLE 274
Query: 535 DEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEFNTK 578
S++H+V GV +IGGCC IQQ+ + E K
Sbjct: 275 LRMSLMHFVEDL---GVQVIGGCCGTRPEHIQQLAEIAKELKPK 315
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 97/233 (41%), Gaps = 32/233 (13%)
Query: 39 TEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK 98
T+PEA + HRDF+ AGAD+I++ + A L + ++Q L K+ +
Sbjct: 52 TKPEAVAKVHRDFLAAGADVIETDTFGATSIVLAEYDLADQAY--YLSKTAAELAKRVAA 109
Query: 99 ENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNV 158
E TP+ F A SIGP + G ++D T + A
Sbjct: 110 EFSTPE---KPRF--------VAGSIGPTTKLPTLG------HIDFDT---MKATFAEQA 149
Query: 159 EALVRAGVDYLALET---IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISS 215
EAL GVD +ET + K AL ++ + G + L S T S G ++
Sbjct: 150 EALWDGGVDLFLVETCQDVLQIKAALNGIEEVFAKKGDRRPLMVSV---TMESMGTMLVG 206
Query: 216 AVTSCLLA--NPDQIQAIGVNCVR-PSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
S +L P I +G+NC P + ++ + + P + + + PN G+
Sbjct: 207 TEISAVLTILEPYPIDILGLNCATGPDLMKPHIKYLAEHSPFIVSCI-PNAGL 258
>gi|126667117|ref|ZP_01738092.1| hypothetical protein MELB17_06204 [Marinobacter sp. ELB17]
gi|126628523|gb|EAZ99145.1| hypothetical protein MELB17_06204 [Marinobacter sp. ELB17]
Length = 303
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 126/319 (39%), Gaps = 51/319 (15%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
+ V LLDG ++ R LWS + +P+ H DFIR +T S+
Sbjct: 2 RPVVLLDGGLGQEIYRRAANVSSA--LWSVAVMHEQPDVVTAVHSDFIRAGAKT-LSLNT 58
Query: 323 YGT----VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAA 378
Y +LR G L A H+ E L +A T A
Sbjct: 59 YAATPSRLLRHGQ-----------LEQLAAIHQNAFELLGQA------------VKATGA 95
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR--AGVDYLALETIPAEKEA 436
+ G + Y G S DL R LV+ A D L +ET+ EA
Sbjct: 96 CVDIAGCLPPLAGSYQGQPARSFE--DL----RDEYSVLVKQQAVADVLLIETMTNTLEA 149
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
A E G+ ++F + D GE ++ AV + +P A+ +NC P
Sbjct: 150 CAACAAASEL-GKPYGVAFRLEADGKLMSGETLAEAVAA---VSPYSPTAVMLNCCDPEL 205
Query: 497 VSTLVRCIKQSHPTV-------QTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEE 549
+S + + + HP V +++ +GG D++ + D + + H V QWL++
Sbjct: 206 ISAAMPELVRLHPCVGGYANAFKSVEALAQGGSVDALEARA-DISPQAYVAH-VRQWLDD 263
Query: 550 GVNIIGGCCEVTSYEIQQM 568
G +IGGCCE+T ++ +
Sbjct: 264 GATVIGGCCEITPEHVRHI 282
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 101/265 (38%), Gaps = 38/265 (14%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V LLDG ++ R LWS + +P+ H DFIRAGA + + Y A
Sbjct: 4 VVLLDGGLGQEIYRRAANVSSA--LWSVAVMHEQPDVVTAVHSDFIRAGAKTLSLNTYAA 61
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIE-TAASIG 125
L + G EQ L +H++ F LL ++ T A +
Sbjct: 62 TPSRLLRHGQLEQ--LAAIHQN---------------------AFELLGQAVKATGACVD 98
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR--AGVDYLALETIPAEKEALAL 183
G + Y G S DL R LV+ A D L +ET+ EA A
Sbjct: 99 IAGCLPPLAGSYQGQPARSFE--DL----RDEYSVLVKQQAVADVLLIETMTNTLEACAA 152
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
E G+ ++F + D GE ++ AV + +P A+ +NC P +S
Sbjct: 153 CAAASEL-GKPYGVAFRLEADGKLMSGETLAEAVAA---VSPYSPTAVMLNCCDPELISA 208
Query: 244 LVRCIKQSHPTVQTIVYPNKGVKLL 268
+ + + HP V K V+ L
Sbjct: 209 AMPELVRLHPCVGGYANAFKSVEAL 233
>gi|440682235|ref|YP_007157030.1| methionine synthase (B12-dependent) [Anabaena cylindrica PCC 7122]
gi|428679354|gb|AFZ58120.1| methionine synthase (B12-dependent) [Anabaena cylindrica PCC 7122]
Length = 1176
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 137/344 (39%), Gaps = 46/344 (13%)
Query: 251 SHPTVQTIVYPNKGVKLLDGSFTS--QVSRHTIKDVDG--HPLWSSVYLTTEPEACVETH 306
HP ++ + P + V + DG+ + Q T +D G + + + T+PEA + H
Sbjct: 2 KHPFLEHLHSPKRPVIVFDGAMGTNLQTQNLTAEDFGGTQYEGCNEYLVHTKPEAVAKVH 61
Query: 307 RDFIRGH---IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 363
RDF+ IET + G VL + Y + T A+L +
Sbjct: 62 RDFLAAGADVIETD-TFGAMSIVLAEYDLADQAYYLTKTAAELAK----------SVAAE 110
Query: 364 YLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 423
+ KP A SIGP + G ++D T + A EAL GVD
Sbjct: 111 FSTPEKPRF---VAGSIGPTTKLPTLG------HIDFDT---MKASFAEQAEALFDGGVD 158
Query: 424 YLALET---IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA- 479
+ET + K AL ++ + G++ L S T S G ++ S +L
Sbjct: 159 LFLVETCQDVLQIKAALNGIEEVFAKKGERRPLMVSV---TMESMGTMLVGTEISAVLTI 215
Query: 480 -NPDQIQAIGVNCVR-PSHVSTLVRCIKQSHPTVQTIVYPNKG---GVWDSVHMKWLDTE 534
P I +G+NC P + ++ + + P V + + PN G V H + E
Sbjct: 216 LEPYPIDILGLNCATGPDLMKPHIKYLSEHSPFVVSCI-PNAGLPENVGGQAHYRLTPVE 274
Query: 535 DEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEFNTK 578
S++H++ GV +IGGCC IQQ+ + E K
Sbjct: 275 LRMSLMHFIEDL---GVQVIGGCCGTRPAHIQQLAEIAKELKPK 315
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 100/233 (42%), Gaps = 32/233 (13%)
Query: 39 TEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK 98
T+PEA + HRDF+ AGAD+I++ + A L + ++Q A L + +L S
Sbjct: 52 TKPEAVAKVHRDFLAAGADVIETDTFGAMSIVLAEYDLADQ-AYYLTKTAAELAKSVA-A 109
Query: 99 ENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNV 158
E TP+ F A SIGP + G ++D T + A
Sbjct: 110 EFSTPE---KPRF--------VAGSIGPTTKLPTLG------HIDFDT---MKASFAEQA 149
Query: 159 EALVRAGVDYLALET---IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISS 215
EAL GVD +ET + K AL ++ + G++ L S T S G ++
Sbjct: 150 EALFDGGVDLFLVETCQDVLQIKAALNGIEEVFAKKGERRPLMVSV---TMESMGTMLVG 206
Query: 216 AVTSCLLA--NPDQIQAIGVNCVR-PSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
S +L P I +G+NC P + ++ + + P V + + PN G+
Sbjct: 207 TEISAVLTILEPYPIDILGLNCATGPDLMKPHIKYLSEHSPFVVSCI-PNAGL 258
>gi|19114286|ref|NP_593374.1| homocysteine methyltransferase (predicted) [Schizosaccharomyces
pombe 972h-]
gi|6648104|sp|P87138.2|YDM7_SCHPO RecName: Full=Uncharacterized protein C57A7.07c
gi|4388614|emb|CAB08765.1| homocysteine methyltransferase (predicted) [Schizosaccharomyces
pombe]
Length = 308
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 134/320 (41%), Gaps = 35/320 (10%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG T+ + + + + LW+S L PE V+ H +F++ I T
Sbjct: 3 MLDGGSTAILPK-LPESISESRLWTSEALVRYPEIVVKHHEEFLK-----VCDIISTFTY 56
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
D S Y D E + N L ++L L I A +G +
Sbjct: 57 QLDASIY-----DEKVEGVPLKQVYANSIGLPVYAREHLGLPNKYI----ALCLGSHAAT 107
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG------VDYLALETIPAEKEALALV 440
+ EY Y L +H+ +EA+ + +D++A E++P EA +
Sbjct: 108 IPGCMEYKMIYDKPTDFEMLYNFHKNRIEAIQASNPKAFEKIDFIAFESLPHVTEAEVVC 167
Query: 441 KLLREFPG--QKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
+L+++ G ++ W++ +C + + E +SS ++ L N D I IGVNC S +
Sbjct: 168 QLIQDMKGWSKRCWITCTCPERSTI---ERVSSIISKILSINHDSIWGIGVNCFHLSLLE 224
Query: 499 TLVRCIKQSHPT-VQTIVYPNKGGVWDSVHMKW--------LDTEDEYSILHYVPQWLEE 549
+ + + P+ + I+YP+ G++ + + + +E+S + L
Sbjct: 225 PIAKMLSSLLPSNITAILYPDGRGLYQNPDGTFSPGSTDHPAPSPEEWSTITAKYSNLHN 284
Query: 550 GVNIIGGCCEVTSYEIQQMR 569
G I+GGCCE + +R
Sbjct: 285 GNLILGGCCETNYNHLSLLR 304
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 129/286 (45%), Gaps = 39/286 (13%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG T+ + + + + LW+S L PE V+ H +F++ DII + YQ +
Sbjct: 3 MLDGGSTAILPK-LPESISESRLWTSEALVRYPEIVVKHHEEFLKV-CDIISTFTYQLDA 60
Query: 69 DNLTKLGYSEQ-EALDLLH---KSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
Y E+ E + L S+ L A++ L +I A +
Sbjct: 61 SI-----YDEKVEGVPLKQVYANSIGLPVYAREH------------LGLPNKYI--ALCL 101
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG------VDYLALETIPAEK 178
G + + EY Y L +H+ +EA+ + +D++A E++P
Sbjct: 102 GSHAATIPGCMEYKMIYDKPTDFEMLYNFHKNRIEAIQASNPKAFEKIDFIAFESLPHVT 161
Query: 179 EALALVKLLREFPG--QKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 236
EA + +L+++ G ++ W++ +C + + E +SS ++ L N D I IGVNC
Sbjct: 162 EAEVVCQLIQDMKGWSKRCWITCTCPERSTI---ERVSSIISKILSINHDSIWGIGVNCF 218
Query: 237 RPSHVSTLVRCIKQSHPT-VQTIVYPN-KGV-KLLDGSFTSQVSRH 279
S + + + + P+ + I+YP+ +G+ + DG+F+ + H
Sbjct: 219 HLSLLEPIAKMLSSLLPSNITAILYPDGRGLYQNPDGTFSPGSTDH 264
>gi|418034904|ref|ZP_12673370.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1519]
gi|354691570|gb|EHE91489.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1519]
Length = 106
Score = 63.2 bits (152), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 117 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA 176
H A ++G YG L DG+EY G Y ++E + +A+H P + ++ D +ALET P
Sbjct: 10 HNYVAGTVGSYGAYLADGNEYRGDY--ELSELEYLAFHLPRLRQILAEKPDLIALETQPK 67
Query: 177 EKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHG 210
E LA++ L+E ++SF+ KD TH S G
Sbjct: 68 LDEPLAVLNWLKENASDYPVYVSFTLKDATHISDG 102
Score = 62.0 bits (149), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A ++G YG L DG+EY G Y ++E + +A+H P + ++ D +ALET P E
Sbjct: 14 AGTVGSYGAYLADGNEYRGDY--ELSELEYLAFHLPRLRQILAEKPDLIALETQPKLDEP 71
Query: 437 LALVKLLREFPGQ-KAWLSFSCKDDTHTSHG 466
LA++ L+E ++SF+ KD TH S G
Sbjct: 72 LAVLNWLKENASDYPVYVSFTLKDATHISDG 102
Score = 39.7 bits (91), Expect = 4.1, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 313 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
H A ++G YG L DG+EY G Y ++E + +A+H P + ++ D +AL
Sbjct: 10 HNYVAGTVGSYGAYLADGNEYRGDY--ELSELEYLAFHLPRLRQILAEKPDLIAL 62
>gi|443700440|gb|ELT99394.1| hypothetical protein CAPTEDRAFT_129091, partial [Capitella
teleta]
Length = 91
Score = 62.8 bits (151), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 28 GHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTK-LGYSEQEALDLLH 86
G PLWSS +++ P A + H F+ +G+D+I+S+ YQA+V + LG SE++++DL+
Sbjct: 1 GDPLWSSRLISSNPSAIQKVHESFLESGSDVIESATYQASVSGFMQHLGLSEKDSIDLMR 60
Query: 87 KSVQLMNSAKD 97
K QL ++D
Sbjct: 61 KGAQLACQSRD 71
>gi|145219197|ref|YP_001129906.1| B12-dependent methionine synthase [Chlorobium phaeovibrioides DSM
265]
gi|145205361|gb|ABP36404.1| methionine synthase (B12-dependent) [Chlorobium phaeovibrioides DSM
265]
Length = 1224
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 46/285 (16%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD---------GHPLWSS--VYLTTEPEACVETHRDFIRA 54
++ +LDG+ + + RH ++ D HPL + + + T+PE H DF+ A
Sbjct: 12 RILVLDGAMGTMIQRHKFQEEDYRGERFKDHAHPLLGNNDLLVLTQPEVIYAIHCDFLEA 71
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKEN-QTPDINLNKTFNL 113
G+DII+++ + AN + G +E +++ H++ +L A D +TP F
Sbjct: 72 GSDIIETNTFNANPISQGDYG-AESLVIEINHEAAKLARKAADAYTAKTPG---KPRF-- 125
Query: 114 LTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 173
A SIGP L + + +++ +++ + +E L+ GVD L +ET
Sbjct: 126 ------VAGSIGPTNKTLSLSPDVNRPGYRAVSFQEVVNNYTMQLEGLMEGGVDLLLVET 179
Query: 174 IPAEKEALALVKLLREFPGQKA-WLSFSCKDDTHTSHGELISSAVTSCL---LANPDQIQ 229
+ A + + EF + + + G +S T +A+ +
Sbjct: 180 VFDTLNCKAALFAIEEFFNRSGHRVPVMVSGTVVDASGRTLSGQTTEAFWISIAHMPDLL 239
Query: 230 AIGVNCVRPSHVSTLVRCIKQSHPTVQTI---------VYPNKGV 265
++G+NC S KQ P ++ + VYPN G+
Sbjct: 240 SVGLNCALGS---------KQMRPFIEAVSTVAESFVSVYPNAGL 275
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 130/332 (39%), Gaps = 53/332 (15%)
Query: 265 VKLLDGSFTSQVSRHTIKDVD---------GHPLWSS--VYLTTEPEACVETHRDFIRGH 313
+ +LDG+ + + RH ++ D HPL + + + T+PE H DF+
Sbjct: 13 ILVLDGAMGTMIQRHKFQEEDYRGERFKDHAHPLLGNNDLLVLTQPEVIYAIHCDFLEA- 71
Query: 314 IETAASIGPYGTVLRDGSEYSGHYV---DSMTEADLIAWHRPNVEALVRAGVDYLALIKP 370
G+ + + + ++ + + D E+ +I + L R D P
Sbjct: 72 ----------GSDIIETNTFNANPISQGDYGAESLVIEINH-EAAKLARKAADAYTAKTP 120
Query: 371 SISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI 430
A SIGP L + + +++ +++ + +E L+ GVD L +ET+
Sbjct: 121 GKPRFVAGSIGPTNKTLSLSPDVNRPGYRAVSFQEVVNNYTMQLEGLMEGGVDLLLVETV 180
Query: 431 PAEKEALALVKLLREFPGQKA-WLSFSCKDDTHTSHGELISSAVTSCL---LANPDQIQA 486
A + + EF + + + G +S T +A+ + +
Sbjct: 181 FDTLNCKAALFAIEEFFNRSGHRVPVMVSGTVVDASGRTLSGQTTEAFWISIAHMPDLLS 240
Query: 487 IGVNCVRPSHVSTLVRCIKQSHPTVQTI---------VYPNKGGVWDSVHMKWLDTEDEY 537
+G+NC S KQ P ++ + VYPN G + ++ D+ D
Sbjct: 241 VGLNCALGS---------KQMRPFIEAVSTVAESFVSVYPNAG--LPNEFGEYDDSPD-- 287
Query: 538 SILHYVPQWLEEG-VNIIGGCCEVTSYEIQQM 568
+ + + + G VNI+GGCC T I+ +
Sbjct: 288 YMAGQIADFAQSGFVNIVGGCCGTTPGHIKAI 319
>gi|326792692|ref|YP_004310513.1| methionine synthase [Clostridium lentocellum DSM 5427]
gi|326543456|gb|ADZ85315.1| Methionine synthase [Clostridium lentocellum DSM 5427]
Length = 793
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 115/263 (43%), Gaps = 38/263 (14%)
Query: 10 LDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVD 69
DG+ + V +K + L++ T PE E HR ++ AG++ + ++ + AN
Sbjct: 13 FDGAMGTAVQSRGLKLGEVPELFN----ITHPEIIEEIHRAYLEAGSNFVTTNTFGANRY 68
Query: 70 NLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGT 129
+ + GY+ ++ ++ K+V++ +AK+ PD + A IGP G
Sbjct: 69 KIEEKGYTVEQ---IISKAVEIAKAAKE---DFPDSYI-------------ALDIGPSGK 109
Query: 130 VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE 189
VLR + V + + +IA +AG D + ET E A V +E
Sbjct: 110 VLRPVGDVEFEEVYEIFKEQVIAGE--------KAGCDVILCETFTDLYELKAAVLAAKE 161
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVSTLV-RC 247
+ + S +++ T G I S + L + A+GVNC + P + +V R
Sbjct: 162 NTSLPVFCTMSFEENGRTFFGTSIESMI---LTLEGLGVSALGVNCSLGPKQLKEIVKRI 218
Query: 248 IKQSHPTVQTIVYPNKGVKLLDG 270
K SH + +V PN G+ ++ G
Sbjct: 219 TKLSH--IPVMVQPNAGLPVMQG 239
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 18/197 (9%)
Query: 374 SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
S A IGP G VLR + V + + +IA + AG D + ET
Sbjct: 98 SYIALDIGPSGKVLRPVGDVEFEEVYEIFKEQVIAGEK--------AGCDVILCETFTDL 149
Query: 434 KEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-V 492
E A V +E + + S +++ T G I S + L + A+GVNC +
Sbjct: 150 YELKAAVLAAKENTSLPVFCTMSFEENGRTFFGTSIESMI---LTLEGLGVSALGVNCSL 206
Query: 493 RPSHVSTLV-RCIKQSHPTVQTIVYPNKG-GVWDSVHMKWLDTEDEYSILHYVPQWLEEG 550
P + +V R K SH + +V PN G V ++ + T +E++ + ++ E+G
Sbjct: 207 GPKQLKEIVKRITKLSH--IPVMVQPNAGLPVMQGENVHYDITAEEFA--EIMKEFAEDG 262
Query: 551 VNIIGGCCEVTSYEIQQ 567
V+I+GGCC T I++
Sbjct: 263 VSILGGCCGTTPEYIEK 279
>gi|434407432|ref|YP_007150317.1| methionine synthase (B12-dependent) [Cylindrospermum stagnale PCC
7417]
gi|428261687|gb|AFZ27637.1| methionine synthase (B12-dependent) [Cylindrospermum stagnale PCC
7417]
Length = 1183
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 138/335 (41%), Gaps = 48/335 (14%)
Query: 251 SHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD-GHPLWSSV--YLT-TEPEACVETH 306
+HP ++ + P + V + DG+ + + + D G P + YL T+PEA + H
Sbjct: 2 THPFLERLHSPERPVIVFDGAMGTNLQTQNLTAEDFGGPQYEGCNEYLIHTKPEAVAKVH 61
Query: 307 RDFIRGH---IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAW-HRPNVEALVRAGV 362
RDF+ IET + G VL +EY AD + + ++ VE
Sbjct: 62 RDFLAAGADVIETD-TFGATSIVL---AEYD--------LADQVYYLNKKAVELAKSVAA 109
Query: 363 DYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGV 422
++ KP A SIGP + G ++D T L A EAL GV
Sbjct: 110 EFSTPEKPRF---VAGSIGPTTKLPTLG------HIDFDT---LKASFAEQAEALWDGGV 157
Query: 423 DYLALET---IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 479
D +ET + K AL ++ + G++ L S T S G ++ S +L
Sbjct: 158 DIFLVETCQDVLQIKAALNGIEEVFARKGERRPLMVSV---TMESMGTMLVGTEISAVLT 214
Query: 480 --NPDQIQAIGVNCVR-PSHVSTLVRCIKQSHPTVQTIVYPNKG---GVWDSVHMKWLDT 533
P I +G+NC P + ++ + + P + V PN G V H +
Sbjct: 215 ILAPFPIDILGLNCATGPDLMKPHIKYLSEHSPFTVSCV-PNAGLPENVGGQAHYRLTPM 273
Query: 534 EDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
E S++H+V GV +IGGCC IQQ+
Sbjct: 274 ELRMSLMHFVEDL---GVQVIGGCCGTRPEHIQQL 305
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 114/269 (42%), Gaps = 36/269 (13%)
Query: 7 VKLLDGSFTSQVSRHTIKDVD-GHPLWSSV--YLT-TEPEACVETHRDFIRAGADIIQSS 62
V + DG+ + + + D G P + YL T+PEA + HRDF+ AGAD+I++
Sbjct: 16 VIVFDGAMGTNLQTQNLTAEDFGGPQYEGCNEYLIHTKPEAVAKVHRDFLAAGADVIETD 75
Query: 63 CYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAA 122
+ A L + ++Q L K+V+L S E TP+ F A
Sbjct: 76 TFGATSIVLAEYDLADQ-VYYLNKKAVELAKSVA-AEFSTPE---KPRF--------VAG 122
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET---IPAEKE 179
SIGP + G ++D T L A EAL GVD +ET + K
Sbjct: 123 SIGPTTKLPTLG------HIDFDT---LKASFAEQAEALWDGGVDIFLVETCQDVLQIKA 173
Query: 180 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA--NPDQIQAIGVNCVR 237
AL ++ + G++ L S T S G ++ S +L P I +G+NC
Sbjct: 174 ALNGIEEVFARKGERRPLMVSV---TMESMGTMLVGTEISAVLTILAPFPIDILGLNCAT 230
Query: 238 -PSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
P + ++ + + P + V PN G+
Sbjct: 231 GPDLMKPHIKYLSEHSPFTVSCV-PNAGL 258
>gi|375095374|ref|ZP_09741639.1| cobalamin-dependent methionine synthase I [Saccharomonospora marina
XMU15]
gi|374656107|gb|EHR50940.1| cobalamin-dependent methionine synthase I [Saccharomonospora marina
XMU15]
Length = 611
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 404 ADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHT 463
AD A R V AL AGVD L LET E V G + + HT
Sbjct: 124 ADRAAAVREQVLALADAGVDLLVLETFGYLDELAEAVVTASAATGLPILAQATFTAEGHT 183
Query: 464 SHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGV 522
G+ VT+ LA D + A+GVNC V P + +V +++ H T+ PN G +
Sbjct: 184 PGGQTPHEVVTA--LAELD-VAALGVNCTVGPQRMLAVVEQLRR-HTTLPLSAQPNAG-L 238
Query: 523 WDSVHMKWLDTEDEYSILH-----YVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEFNT 577
VH + EYS+ H Y + E GV+I+GGCC T ++ + + E +
Sbjct: 239 PRRVHGRRF----EYSLDHDYFARYARRCAERGVSIVGGCCGTTPGHVRAIAAAVSELDG 294
Query: 578 KKN 580
++
Sbjct: 295 RRT 297
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 88/228 (38%), Gaps = 30/228 (13%)
Query: 39 TEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK 98
+ PE H ++ AGADI+ ++ + A+ L + G+S ++ V+L A +
Sbjct: 40 SNPELVSTVHESYVDAGADILLTNTFGASRPRLAEHGFSGDPG-EINRAGVRLARQAARQ 98
Query: 99 ENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNV 158
+ I S+ P S + AD A R V
Sbjct: 99 AGRP---------------IFVGGSVAP---------AVSAGRRTQVGAADRAAAVREQV 134
Query: 159 EALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVT 218
AL AGVD L LET E V G + + HT G+ VT
Sbjct: 135 LALADAGVDLLVLETFGYLDELAEAVVTASAATGLPILAQATFTAEGHTPGGQTPHEVVT 194
Query: 219 SCLLANPDQIQAIGVNC-VRPSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
+ LA D + A+GVNC V P + +V +++ H T+ PN G+
Sbjct: 195 A--LAELD-VAALGVNCTVGPQRMLAVVEQLRR-HTTLPLSAQPNAGL 238
>gi|223938282|ref|ZP_03630177.1| homocysteine S-methyltransferase [bacterium Ellin514]
gi|223892996|gb|EEF59462.1| homocysteine S-methyltransferase [bacterium Ellin514]
Length = 624
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 97/241 (40%), Gaps = 38/241 (15%)
Query: 28 GHPLWSS--VYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLL 85
G PL +S PE + HRD++ AGA +I+++ + AN L K G + Q+ +D+
Sbjct: 27 GQPLNASYDALNLQHPEIVSQLHRDYLDAGAHLIETNTFGANRIKLEKFGLA-QKTVDIN 85
Query: 86 HKSVQLMNSAKDKENQTPDINLNKTFNLLTGH-IETAASIGPYGTVLRDGSEYSGHYVDS 144
QL + G A S+GP D S S DS
Sbjct: 86 KHGAQL------------------ALEVACGRGAFVAGSVGPLSA---DPSSLSTQTKDS 124
Query: 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDD 204
+R +EALV GVD L LET E ++++ R S S DD
Sbjct: 125 --------AYREQLEALVSEGVDALFLETFNRLDELAFVLRIARSLGNTPIIASLSFGDD 176
Query: 205 THTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVSTLVRCIKQSHPTVQTIVYPNK 263
HT+ G I+ A + A D +G+NC P+ L+ + P +YPN
Sbjct: 177 GHTADGLRINEAFSRLKEAGAD---VVGLNCHFGPTIAEKLLEELI-VRPGDLISIYPNA 232
Query: 264 G 264
G
Sbjct: 233 G 233
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 79/193 (40%), Gaps = 17/193 (8%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S+GP D S S DS +R +EALV GVD L LET E
Sbjct: 104 AGSVGPLSA---DPSSLSTQTKDS--------AYREQLEALVSEGVDALFLETFNRLDEL 152
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPS 495
++++ R S S DD HT+ G I+ A + A D +G+NC P+
Sbjct: 153 AFVLRIARSLGNTPIIASLSFGDDGHTADGLRINEAFSRLKEAGAD---VVGLNCHFGPT 209
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555
L+ + P +YPN G + +++ + P+ + +G +IG
Sbjct: 210 IAEKLLEELI-VRPGDLISIYPNAGRPY-FYEGRYIYHSTPSYFADFAPKLIAQGARLIG 267
Query: 556 GCCEVTSYEIQQM 568
GCC T I M
Sbjct: 268 GCCGTTPETIAAM 280
>gi|427707255|ref|YP_007049632.1| methionine synthase [Nostoc sp. PCC 7107]
gi|427359760|gb|AFY42482.1| methionine synthase (B12-dependent) [Nostoc sp. PCC 7107]
Length = 1187
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 139/344 (40%), Gaps = 46/344 (13%)
Query: 251 SHPTVQTIVYPNKGVKLLDGSFTS--QVSRHTIKDVDGHPLWS-SVYLT-TEPEACVETH 306
+HP ++ + P+ V + DG+ + Q T +D G + YL T+PEA + H
Sbjct: 2 THPFLERLRSPDSPVLVFDGAMGTNLQTQNLTAEDFGGAQYEGCNEYLVHTKPEAVAKVH 61
Query: 307 RDFIRGH---IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 363
RDF+ IET + G VL + Y S A+L +
Sbjct: 62 RDFLAAGADVIETD-TFGSTSIVLAEYDLADQAYYLSKKAAELAK----------SVAAE 110
Query: 364 YLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 423
+ KP A SIGP + G ++D T + A EAL+ GVD
Sbjct: 111 FSTPEKPRF---VAGSIGPTTKLPTLG------HIDFDT---MKASFAEQAEALIDGGVD 158
Query: 424 YLALETIPAEKEALALVKLLREFPGQKA-----WLSFSCKDDTHTSHGELISSAVTSCLL 478
L +ET + A + + E +K +S + + G IS+ VT +L
Sbjct: 159 LLLVETCQDVLQIKAALNGIEEAFAKKGDRLPVMVSVTMESMGTMLVGTEISAVVT--IL 216
Query: 479 ANPDQIQAIGVNCVR-PSHVSTLVRCIKQSHPTVQTIVYPNKG---GVWDSVHMKWLDTE 534
A P I +G+NC P + ++ + + P V + + PN G V H + E
Sbjct: 217 A-PYNIDILGLNCATGPDLMKPHIKYLAEHSPFVVSCI-PNAGLPENVGGQAHYRLTPLE 274
Query: 535 DEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEFNTK 578
S++H+V GV +IGGCC IQQ+ + E K
Sbjct: 275 LRMSLMHFVEDL---GVQVIGGCCGTRPEHIQQLAEITKELKPK 315
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 117/269 (43%), Gaps = 36/269 (13%)
Query: 7 VKLLDGSFTS--QVSRHTIKDVDGHPLWS-SVYLT-TEPEACVETHRDFIRAGADIIQSS 62
V + DG+ + Q T +D G + YL T+PEA + HRDF+ AGAD+I++
Sbjct: 16 VLVFDGAMGTNLQTQNLTAEDFGGAQYEGCNEYLVHTKPEAVAKVHRDFLAAGADVIETD 75
Query: 63 CYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAA 122
+ + L + ++Q A L K+ +L S E TP+ F A
Sbjct: 76 TFGSTSIVLAEYDLADQ-AYYLSKKAAELAKSVA-AEFSTPE---KPRF--------VAG 122
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
SIGP + G ++D T + A EAL+ GVD L +ET + A
Sbjct: 123 SIGPTTKLPTLG------HIDFDT---MKASFAEQAEALIDGGVDLLLVETCQDVLQIKA 173
Query: 183 LVKLLREFPGQKA-----WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 237
+ + E +K +S + + G IS+ VT +LA P I +G+NC
Sbjct: 174 ALNGIEEAFAKKGDRLPVMVSVTMESMGTMLVGTEISAVVT--ILA-PYNIDILGLNCAT 230
Query: 238 -PSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
P + ++ + + P V + + PN G+
Sbjct: 231 GPDLMKPHIKYLAEHSPFVVSCI-PNAGL 258
>gi|110596965|ref|ZP_01385255.1| 5-methyltetrahydrofolate--homocysteine methyltransferase
[Chlorobium ferrooxidans DSM 13031]
gi|110341652|gb|EAT60112.1| 5-methyltetrahydrofolate--homocysteine methyltransferase
[Chlorobium ferrooxidans DSM 13031]
Length = 1228
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 124/286 (43%), Gaps = 48/286 (16%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD---------GHPLWSS--VYLTTEPEACVETHRDFIRA 54
++ +LDG+ + + RH +++ D HPL + + + T P+ H DF+ A
Sbjct: 12 RILVLDGAMGTMIQRHKLQEEDYRGSRFATHSHPLMGNNDILVLTRPDIIYALHCDFLEA 71
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLH-KSVQLMNSAKDKEN-QTPDINLNKTFN 112
G+DII+++ + AN +++ YS + + L+ ++ +L A D+ +TPD F
Sbjct: 72 GSDIIETNTFNAN--PISQSDYSAEHLVRELNVEAAKLARKAADEYTARTPD---KPRF- 125
Query: 113 LLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE 172
A SIGP L + + +++ +++ + +E L+ GVD L +E
Sbjct: 126 -------VAGSIGPTNKTLSMSPDVNNPGYRAVSFEEVVDNYTLQLEGLMEVGVDMLLVE 178
Query: 173 TIPAEKEALALVKLLREFPGQKA-WLSFSCKDDTHTSHGELISSAVTSCL---LANPDQI 228
T+ A + + EF + + + G +S T +A+ +
Sbjct: 179 TVFDTLNCKAALFSIEEFFNRTGVRIPVMVSGTVVDASGRTLSGQTTEAFWISIAHMPDL 238
Query: 229 QAIGVNCVRPSHVSTLVRCIKQSHPTVQTI---------VYPNKGV 265
+IG+NC S KQ P +++I VYPN G+
Sbjct: 239 LSIGLNCALGS---------KQMRPFIESISGIAESLVSVYPNAGL 275
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 124/335 (37%), Gaps = 55/335 (16%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVD---------GHPLWSS--VYLTTEPEACVETHRDFIR 311
K + +LDG+ + + RH +++ D HPL + + + T P+ H DF+
Sbjct: 11 KRILVLDGAMGTMIQRHKLQEEDYRGSRFATHSHPLMGNNDILVLTRPDIIYALHCDFLE 70
Query: 312 GHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWH---RPNVEA--LVRAGVDYLA 366
D E + + ++++D A H NVEA L R D
Sbjct: 71 AG--------------SDIIETNTFNANPISQSDYSAEHLVRELNVEAAKLARKAADEYT 116
Query: 367 LIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 426
P A SIGP L + + +++ +++ + +E L+ GVD L
Sbjct: 117 ARTPDKPRFVAGSIGPTNKTLSMSPDVNNPGYRAVSFEEVVDNYTLQLEGLMEVGVDMLL 176
Query: 427 LETIPAEKEALALVKLLREFPGQKA-WLSFSCKDDTHTSHGELISSAVTSCL---LANPD 482
+ET+ A + + EF + + + G +S T +A+
Sbjct: 177 VETVFDTLNCKAALFSIEEFFNRTGVRIPVMVSGTVVDASGRTLSGQTTEAFWISIAHMP 236
Query: 483 QIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTI---------VYPNKGGVWDSVHMKWLDT 533
+ +IG+NC S KQ P +++I VYPN G D
Sbjct: 237 DLLSIGLNCALGS---------KQMRPFIESISGIAESLVSVYPNAG---LPNEFGEYDD 284
Query: 534 EDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
EY VNI+GGCC T I+ +
Sbjct: 285 SPEYMAAQIADFATSGFVNIVGGCCGTTPQHIKAI 319
>gi|406707537|ref|YP_006757889.1| Homocysteine S-methyltransferase [alpha proteobacterium HIMB59]
gi|406653313|gb|AFS48712.1| Homocysteine S-methyltransferase [alpha proteobacterium HIMB59]
Length = 345
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 29/212 (13%)
Query: 41 PEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKEN 100
PE + HR+FIRAG+D++Q+ Y + + L +G ++E L+ L K+ + AKD +
Sbjct: 42 PEVVTQLHREFIRAGSDVVQAFTYYGHREKLRLIG--KEELLEPLQKNA--LKIAKDAAD 97
Query: 101 QTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA 160
+ P+++L ++ G++ P ++ H A+ IAW +
Sbjct: 98 EFPELDL-----MIAGNVANTNIYSP--------TDKQSHIDCQKMFAEQIAWAK----- 139
Query: 161 LVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSC 220
AGVD++ ETI +EA +K +++ G A ++ + T G SA +C
Sbjct: 140 --EAGVDFVIAETINWTEEAKLALKEIKD-AGLIAVVNLAIPKGDKTREGH---SAAEAC 193
Query: 221 LLANPDQIQAIGVNCVR-PSHVSTLVRCIKQS 251
+ +G+NC R P L+ I++
Sbjct: 194 KILEDHGADVVGLNCYRGPDMTMKLLPSIREQ 225
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 115/296 (38%), Gaps = 50/296 (16%)
Query: 299 PEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHY--VDSMTEADLIAWHRPNVEA 356
PE + HR+FIR G+ + Y GH + + + +L+ + N
Sbjct: 42 PEVVTQLHREFIRA-----------GSDVVQAFTYYGHREKLRLIGKEELLEPLQKNALK 90
Query: 357 LVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA 416
+ + D P + A ++ T + ++ H A+ IAW +
Sbjct: 91 IAKDAADEF----PELDLMIAGNVA--NTNIYSPTDKQSHIDCQKMFAEQIAWAK----- 139
Query: 417 LVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSC 476
AGVD++ ETI +EA +K +++ G A ++ + T G SA +C
Sbjct: 140 --EAGVDFVIAETINWTEEAKLALKEIKD-AGLIAVVNLAIPKGDKTREGH---SAAEAC 193
Query: 477 LLANPDQIQAIGVNCVR-PSHVSTLVRCIKQS-----------------HPTVQTIVYPN 518
+ +G+NC R P L+ I++ PT I PN
Sbjct: 194 KILEDHGADVVGLNCYRGPDMTMKLLPSIREQVSCHVAALPVPYRTNEEFPTHMYIEDPN 253
Query: 519 KGGVWDSVHMKWLD--TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMI 572
G + +V LD T + + + + Q ++ VN IG CC + +++M + +
Sbjct: 254 CGCLDGNVSHIALDGLTCNRFEMAEFTKQCMDINVNFIGICCGADPHHVREMAVAM 309
>gi|167524841|ref|XP_001746756.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775026|gb|EDQ88652.1| predicted protein [Monosiga brevicollis MX1]
Length = 1268
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 124/274 (45%), Gaps = 36/274 (13%)
Query: 4 ICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
I +KL + +F + + K + G+ + V + T P+ VE H+ ++RAGADI++++
Sbjct: 41 IQTLKLEEENFRGEEFKSHPKPLQGN---NDVLVLTMPDDIVELHKRYLRAGADIVETNT 97
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
+ ANV +++ Y+ + ++ L+ ++ A+ ++ L K + A +
Sbjct: 98 FNANV--ISQADYAMEHLVERLN--IEAARVARRACDEIQAEGLGKKY--------VAGA 145
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI---PAEKEA 180
+GP L + ++T +L+ + + AL+ GVD L +ETI K A
Sbjct: 146 VGPTNRTLSISPSVEQPELRNITFPELVKAYSQQIRALIEGGVDILLVETIFDTANAKAA 205
Query: 181 LALVKLLRE--FPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQIQAIGVNC-- 235
L + L E +P +S + D + T G+ + S ANP A+G+NC
Sbjct: 206 LFAIDALVEEGYPRLPLLISGTITDRSGRTLSGQTPDAFTVSVSHANP---LALGLNCAL 262
Query: 236 ----VRPSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
+RP H+ + + I YPN G+
Sbjct: 263 GAEDMRP-HLEEIAKATD-----AYIICYPNAGL 290
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 129/315 (40%), Gaps = 55/315 (17%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+KL + +F + + K + G+ + V + T P+ VE H+ ++R +
Sbjct: 44 LKLEEENFRGEEFKSHPKPLQGN---NDVLVLTMPDDIVELHKRYLRAGADIV------- 93
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWH---RPNVEA--LVRAGVDYL---ALIKPSISSQT 376
E + + +++AD H R N+EA + R D + L K +
Sbjct: 94 -------ETNTFNANVISQADYAMEHLVERLNIEAARVARRACDEIQAEGLGKKYV---- 142
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI---PAE 433
A ++GP L + ++T +L+ + + AL+ GVD L +ETI
Sbjct: 143 AGAVGPTNRTLSISPSVEQPELRNITFPELVKAYSQQIRALIEGGVDILLVETIFDTANA 202
Query: 434 KEALALVKLLRE--FPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQIQAIGVN 490
K AL + L E +P +S + D + T G+ + S ANP A+G+N
Sbjct: 203 KAALFAIDALVEEGYPRLPLLISGTITDRSGRTLSGQTPDAFTVSVSHANP---LALGLN 259
Query: 491 C------VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVP 544
C +RP H+ + + I YPN G M D E + H V
Sbjct: 260 CALGAEDMRP-HLEEIAKATD-----AYIICYPNAGL---PNAMGGYDETPEITGSH-VE 309
Query: 545 QWLEEG-VNIIGGCC 558
+ +G +NI+GGCC
Sbjct: 310 AFARDGLLNIVGGCC 324
>gi|375149206|ref|YP_005011647.1| methionine synthase [Niastella koreensis GR20-10]
gi|361063252|gb|AEW02244.1| Methionine synthase [Niastella koreensis GR20-10]
Length = 346
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 141/342 (41%), Gaps = 44/342 (12%)
Query: 265 VKLLDGSFTSQVSRHTIKDVD--GHPL--WSSVYLTTEPEACVETHRDFIRG----HIET 316
+ ++DG+ + + RH +++ D G W+S L + V T D I+G ++
Sbjct: 12 ILIIDGAMGTMIQRHKLEEADYRGERFKDWASD-LKGNNDLLVLTQPDIIKGIHKLYLAA 70
Query: 317 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ- 375
A I T + ++++S+ +A + EA+ + S +
Sbjct: 71 GADIIETNTFNAQVISLADYHMESLAYELNVAAAKIAKEAVEEFFSSPTGGGREGASGRD 130
Query: 376 ---TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA 432
A +IGP L + + ++T + ++ + V+ LV GVD L +ETI
Sbjct: 131 RAYVAGAIGPLNKTLSLSPDVNNPGYRALTFDEAVSAYYEQVKGLVDGGVDLLLIETIFD 190
Query: 433 EKEALALVKLLREF------PGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQIQ 485
A A + ++++ P +S + D + T G+ + + TS + A P
Sbjct: 191 TLNAKAAIYAIKKYFADVNKPEVPIMISGTITDASGRTLSGQTLEAFYTSVMHAKP---L 247
Query: 486 AIGVNC------VRP--SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY 537
+IG+NC +RP +S + C ++P PN G +D E
Sbjct: 248 SIGLNCALGASEMRPHIEELSQIASCFTSAYPNAG---LPNAMGEYD---------EQPE 295
Query: 538 SILHYVPQWLEEG-VNIIGGCCEVTSYEIQQMRIMIDEFNTK 578
H++ +W EG VNI+GGCC T I+ + + F +
Sbjct: 296 QTAHFLEEWAREGFVNIVGGCCGTTPDHIKHIADHVRNFKPR 337
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 129/296 (43%), Gaps = 39/296 (13%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD--GHPL--WSS-------VYLTTEPEACVETHRDFIRA 54
++ ++DG+ + + RH +++ D G W+S + + T+P+ H+ ++ A
Sbjct: 11 RILIIDGAMGTMIQRHKLEEADYRGERFKDWASDLKGNNDLLVLTQPDIIKGIHKLYLAA 70
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLL 114
GADII+++ + A V +L + E A +L + ++ A ++ +P +
Sbjct: 71 GADIIETNTFNAQVISLADY-HMESLAYELNVAAAKIAKEAVEEFFSSP-TGGGREGASG 128
Query: 115 TGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI 174
A +IGP L + + ++T + ++ + V+ LV GVD L +ETI
Sbjct: 129 RDRAYVAGAIGPLNKTLSLSPDVNNPGYRALTFDEAVSAYYEQVKGLVDGGVDLLLIETI 188
Query: 175 PAEKEALALVKLLREF------PGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQ 227
A A + ++++ P +S + D + T G+ + + TS + A P
Sbjct: 189 FDTLNAKAAIYAIKKYFADVNKPEVPIMISGTITDASGRTLSGQTLEAFYTSVMHAKP-- 246
Query: 228 IQAIGVNC------VRP--SHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQ 275
+IG+NC +RP +S + C T YPN G+ G + Q
Sbjct: 247 -LSIGLNCALGASEMRPHIEELSQIASCF--------TSAYPNAGLPNAMGEYDEQ 293
>gi|365874549|ref|ZP_09414082.1| Homocysteine S-methyltransferase [Thermanaerovibrio velox DSM
12556]
gi|363984636|gb|EHM10843.1| Homocysteine S-methyltransferase [Thermanaerovibrio velox DSM
12556]
Length = 806
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 111/264 (42%), Gaps = 47/264 (17%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTE-----PEACVETHRDFIRAGADIIQSSC 63
+LDG +Q++ W L E P+A +E HR ++ +GA +I+++
Sbjct: 18 VLDGGMGTQLAERG---------WHPPMLPEEMCLHMPQAVLEVHRGYVASGAAVIETNS 68
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
+ +V L+ G ++ A +L +S +L A + + A S
Sbjct: 69 FGGSVRKLSLKGLGDR-AEELARRSAELARRAAGDQ------------------VLVAGS 109
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GP G +L+ + M+ + + P V LV G D + +ET+ KEA A
Sbjct: 110 VGPSGDMLKP--------LGDMSFQEAVMSFEPQVRGLVEGGADLILVETMLDLKEAKAA 161
Query: 184 VKLLREFPGQKAW-LSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHV 241
V+ ++ + +SF+ D T G+ S + + A +G NC + P
Sbjct: 162 VEAVKRVREDMPFVVSFTFDRDGRTVSGD---SPEAAAIWAEAVGAIGVGANCGLGPRGY 218
Query: 242 STLVRCIKQSHPTVQTIVYPNKGV 265
+VR + + ++ VYPN GV
Sbjct: 219 VEVVRRLAGAA-SLPVWVYPNAGV 241
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 122/312 (39%), Gaps = 51/312 (16%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTE-----PEACVETHRDFIRGHIETAASIG 321
+LDG +Q++ W L E P+A +E HR ++ +
Sbjct: 18 VLDGGMGTQLAERG---------WHPPMLPEEMCLHMPQAVLEVHRGYVASGAAVIETNS 68
Query: 322 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIG 381
G+V + + G + + R + E RA D + + A S+G
Sbjct: 69 FGGSVRKLSLKGLGDRAEELA--------RRSAELARRAAGDQVLV---------AGSVG 111
Query: 382 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 441
P G +L+ + M+ + + P V LV G D + +ET+ KEA A V+
Sbjct: 112 PSGDMLKP--------LGDMSFQEAVMSFEPQVRGLVEGGADLILVETMLDLKEAKAAVE 163
Query: 442 LLREFPGQKAWL-SFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVST 499
++ ++ SF+ D T G+ S + + A +G NC + P
Sbjct: 164 AVKRVREDMPFVVSFTFDRDGRTVSGD---SPEAAAIWAEAVGAIGVGANCGLGPRGYVE 220
Query: 500 LVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE 559
+VR + + ++ VYPN G ++ + + + L LE G ++IGGCC
Sbjct: 221 VVRRLAGAA-SLPVWVYPNAGVPSAGDYLGPQEFAEGCAAL------LEAGASVIGGCCG 273
Query: 560 VTSYEIQQMRIM 571
T ++ + M
Sbjct: 274 TTPEHVKALAAM 285
>gi|310800639|gb|EFQ35532.1| homocysteine S-methyltransferase [Glomerella graminicola M1.001]
Length = 355
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 109/267 (40%), Gaps = 45/267 (16%)
Query: 6 KVKLLDGSF-TSQVSRHTIK-DVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
++ +LDG TS ++ I + PLWS+ L + + +DF DII ++
Sbjct: 10 RILVLDGGLGTSLEDKYGIGFESATTPLWSTHLLVDGQDTLLACQKDFGNVPVDIILTAT 69
Query: 64 YQANVDNLTKL-------GYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG 116
YQ ++D G + + ++++ + A
Sbjct: 70 YQLSIDGFANTRTAKYPNGIDCAAIRNFIQDAIRIAHEAGRAHG---------------- 113
Query: 117 HIETAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAG-----VDYLA 170
+TA SIGPYG + G EYSG Y D + L WH ++ AG V Y+A
Sbjct: 114 -TKTALSIGPYGACMIPGQEYSGAYDSDHDSLEKLRDWHLERLQLFKDAGAFSSPVAYVA 172
Query: 171 LETIP------AEKEALALVKLLREFPGQKAWLS-FSCKDDTHTSHGELISSAVTSCLLA 223
+ETIP A ++AL + L W++ + D G + AVT+ L
Sbjct: 173 VETIPRSDEIKAVRQALDRIGLFATENPLPFWIATLFPRQDNCLPDGSSVKEAVTAML-- 230
Query: 224 NPD----QIQAIGVNCVRPSHVSTLVR 246
PD + IG+NC + + +L++
Sbjct: 231 GPDVAMSRPWGIGINCTKVWKLESLIK 257
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 48/244 (19%)
Query: 373 SSQTAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAG-----VDYLA 426
++TA SIGPYG + G EYSG Y D + L WH ++ AG V Y+A
Sbjct: 113 GTKTALSIGPYGACMIPGQEYSGAYDSDHDSLEKLRDWHLERLQLFKDAGAFSSPVAYVA 172
Query: 427 LETIP------AEKEALALVKLLREFPGQKAWLS-FSCKDDTHTSHGELISSAVTSCLLA 479
+ETIP A ++AL + L W++ + D G + AVT+ L
Sbjct: 173 VETIPRSDEIKAVRQALDRIGLFATENPLPFWIATLFPRQDNCLPDGSSVKEAVTAML-- 230
Query: 480 NPD----QIQAIGVNCVRPSHVSTLVRCIKQS-HPTVQT---------IVYPN--KGGVW 523
PD + IG+NC + + +L++ + + +Q ++YP+ G V+
Sbjct: 231 GPDVAMSRPWGIGINCTKVWKLESLIKSYESAVQELIQEGAIAEAPALVLYPDGTNGEVY 290
Query: 524 DSVHMKWLDTEDEYSILHYVPQW---LEEGVN-----------IIGGCCEVTSYEIQQMR 569
++ KW E H V W L + V ++GGCC+ + +I ++R
Sbjct: 291 NTATQKW---ELPGGSHHPVTSWEAQLSQVVAGAQSRGLWNQIVVGGCCKASHSDIARLR 347
Query: 570 IMID 573
++
Sbjct: 348 AAVE 351
>gi|428300404|ref|YP_007138710.1| methionine synthase [Calothrix sp. PCC 6303]
gi|428236948|gb|AFZ02738.1| methionine synthase (B12-dependent) [Calothrix sp. PCC 6303]
Length = 1176
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 140/344 (40%), Gaps = 46/344 (13%)
Query: 251 SHPTVQTIVYPNKGVKLLDGSFTS--QVSRHTIKDVDGHPLWS-SVYLT-TEPEACVETH 306
HP ++ + P + V + DG + Q T +D G + YL T+PEA + H
Sbjct: 2 KHPFLERLHSPERPVIVFDGGMGTHLQTQNLTPEDFGGAEYEGCNEYLVHTKPEAVEKVH 61
Query: 307 RDFIRGH---IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 363
RD++ IET + G VL + + Y + T A+L R +
Sbjct: 62 RDYLAAGADVIETD-TFGGTPIVLAEYNLADQTYYLNKTAAELAK----------RVAAE 110
Query: 364 YLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 423
+ KP A S+GP + G ++D T D EAL GVD
Sbjct: 111 FSTPEKPRF---VAGSMGPTTKLPTLG------HIDYDTLKDDFVQQ---AEALWDGGVD 158
Query: 424 YLALET---IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSH--GELISSAVTSCLL 478
+ET + K AL V+ + G++ L S +T + G I++ VT +
Sbjct: 159 LFIIETCQDVLQIKAALNAVEEVFTKKGKRIPLMVSVTMETMGTMLVGTEINAVVT---I 215
Query: 479 ANPDQIQAIGVNCVR-PSHVSTLVRCIKQSHPTVQTIVYPNKG---GVWDSVHMKWLDTE 534
P +I +G+NC P + ++ + + P V + V PN G V H + E
Sbjct: 216 LEPYKIDILGLNCATGPDLMKPHIKYLSEHSPFVVSCV-PNAGLPENVGGKAHYRLTPME 274
Query: 535 DEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEFNTK 578
S++H+V GV +IGGCC IQQ+ + E K
Sbjct: 275 LRMSLMHFVEDL---GVQVIGGCCGTRPEHIQQLAEITKELKPK 315
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 100/233 (42%), Gaps = 32/233 (13%)
Query: 39 TEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK 98
T+PEA + HRD++ AGAD+I++ + L + ++Q L+K+ +
Sbjct: 52 TKPEAVEKVHRDYLAAGADVIETDTFGGTPIVLAEYNLADQTY--YLNKTAAELAKRVAA 109
Query: 99 ENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNV 158
E TP+ F A S+GP + G ++D T D
Sbjct: 110 EFSTPE---KPRF--------VAGSMGPTTKLPTLG------HIDYDTLKDDFVQQ---A 149
Query: 159 EALVRAGVDYLALET---IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSH--GELI 213
EAL GVD +ET + K AL V+ + G++ L S +T + G I
Sbjct: 150 EALWDGGVDLFIIETCQDVLQIKAALNAVEEVFTKKGKRIPLMVSVTMETMGTMLVGTEI 209
Query: 214 SSAVTSCLLANPDQIQAIGVNCVR-PSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
++ VT + P +I +G+NC P + ++ + + P V + V PN G+
Sbjct: 210 NAVVT---ILEPYKIDILGLNCATGPDLMKPHIKYLSEHSPFVVSCV-PNAGL 258
>gi|325284800|ref|YP_004264263.1| methionine synthase [Deinococcus proteolyticus MRP]
gi|324316289|gb|ADY27403.1| methionine synthase [Deinococcus proteolyticus MRP]
Length = 1232
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 127/322 (39%), Gaps = 42/322 (13%)
Query: 265 VKLLDGSFTSQVSRHTIKDVD-------GHPL----WSSVYLTTEPEACVETHRDFIRGH 313
+ +LDG+ + + RH + + D HPL + + T+P+ E H + G
Sbjct: 32 ILILDGAMGTMIQRHRLTEADFRGERLRDHPLPLQGANDLLTLTQPQLIEEIHAAYF-GA 90
Query: 314 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSIS 373
A + + +EY VD DLI + NV+ A P
Sbjct: 91 GADIAETNTFSSSRLGLAEYG---VD-----DLI--YELNVQGARLARRAAERYSTPERP 140
Query: 374 SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
A +IGP + + ++T +L++ + + L+ GVD L +ET+
Sbjct: 141 RWVAGAIGPTNRTASMSPDVNRPGFRAVTFDELVSSYSEQIHGLLDGGVDALLIETVFDT 200
Query: 434 KEALALVKLLREFPGQKA-WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ--AIGVN 490
A A + E GQ+ + + G +S LA+ + ++G+N
Sbjct: 201 LNAKAALYAAEEVFGQQGRQVPIMVSGTITDASGRTLSGQTLGAFLASISHLPLLSVGLN 260
Query: 491 C-VRPSHVSTLVRCIKQSHPTVQTIVYPNKG-----GVWDSVHMKWLDTEDEYSILHYVP 544
C + P+ + V+ + S P T YPN G G +D LD DE
Sbjct: 261 CALGPAELRGHVQELSASTPFF-TSAYPNAGLPNALGGYDETPQTMLDVMDE-------- 311
Query: 545 QWLEEG-VNIIGGCCEVTSYEI 565
WLE+G VNI+GGCC T I
Sbjct: 312 -WLEQGWVNIVGGCCGTTPEHI 332
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 118/276 (42%), Gaps = 31/276 (11%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD-------GHPL----WSSVYLTTEPEACVETHRDFIRA 54
++ +LDG+ + + RH + + D HPL + + T+P+ E H + A
Sbjct: 31 RILILDGAMGTMIQRHRLTEADFRGERLRDHPLPLQGANDLLTLTQPQLIEEIHAAYFGA 90
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHK-SVQLMNSAKDKENQTPDINLNKTFNL 113
GADI +++ + + ++LG +E DL+++ +VQ A+ + +
Sbjct: 91 GADIAETNTFSS-----SRLGLAEYGVDDLIYELNVQGARLARRAAERYSTPERPRWVAG 145
Query: 114 LTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 173
G AS+ P V R G ++T +L++ + + L+ GVD L +ET
Sbjct: 146 AIGPTNRTASMSP--DVNRPG-------FRAVTFDELVSSYSEQIHGLLDGGVDALLIET 196
Query: 174 IPAEKEALALVKLLREFPGQKA-WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ--A 230
+ A A + E GQ+ + + G +S LA+ + +
Sbjct: 197 VFDTLNAKAALYAAEEVFGQQGRQVPIMVSGTITDASGRTLSGQTLGAFLASISHLPLLS 256
Query: 231 IGVNC-VRPSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
+G+NC + P+ + V+ + S P T YPN G+
Sbjct: 257 VGLNCALGPAELRGHVQELSASTPFF-TSAYPNAGL 291
>gi|254424469|ref|ZP_05038187.1| methionine synthase [Synechococcus sp. PCC 7335]
gi|196191958|gb|EDX86922.1| methionine synthase [Synechococcus sp. PCC 7335]
Length = 1195
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 136/323 (42%), Gaps = 44/323 (13%)
Query: 261 PNKGVKLLDGSFTSQVSRHTIKDVD-GHPLWSSV--YLT-TEPEACVETHRDF--IRGHI 314
P + V + DG+ + + + D G P + YL T+PEA + HR F + +
Sbjct: 12 PERPVLVFDGAMGTSLQMQGLTAADFGGPEYEGCNEYLVETKPEAVDKVHRGFLAVGADV 71
Query: 315 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISS 374
+ G VL +EY D E ++ E +A +Y KP
Sbjct: 72 IETDTFGGTALVL---AEYD--LADKAYE-----LNKKAAEIARKAADEYSTPGKPRF-- 119
Query: 375 QTAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYLALET---I 430
A SIGP GT L GH D++ +A L VE L GVD + +ET +
Sbjct: 120 -VAGSIGP-GTKL----PTLGHVDFDTLKDAYL-----EQVEGLYDGGVDLMLVETCQDV 168
Query: 431 PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-LANPDQIQAIGV 489
K AL ++ + E G + L S + + L+ S + + L + P I +G+
Sbjct: 169 LQVKAALIAIEEIFEKKGDRLPLMVSVTVEQQGTM--LVGSEIGAALTILEPFGIDILGL 226
Query: 490 NCVR-PSHVSTLVRCIKQSHPTVQTIVYPNKG---GVWDSVHMKWLDTEDEYSILHYVPQ 545
NC P+ + ++ + ++ P + + V PN G V H + E +++H+V
Sbjct: 227 NCATGPAEMKEHIKYLSENSPFIISCV-PNAGLPENVGGQAHYRLTPMELRMALMHFVED 285
Query: 546 WLEEGVNIIGGCCEVTSYEIQQM 568
GV IIGGCC I+Q+
Sbjct: 286 L---GVQIIGGCCGTRPDHIEQL 305
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 36/269 (13%)
Query: 7 VKLLDGSFTSQVSRHTIKDVD-GHPLWSSV--YLT-TEPEACVETHRDFIRAGADIIQSS 62
V + DG+ + + + D G P + YL T+PEA + HR F+ GAD+I++
Sbjct: 16 VLVFDGAMGTSLQMQGLTAADFGGPEYEGCNEYLVETKPEAVDKVHRGFLAVGADVIETD 75
Query: 63 CYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAA 122
+ L + +++ A +L K+ ++ A D E TP F A
Sbjct: 76 TFGGTALVLAEYDLADK-AYELNKKAAEIARKAAD-EYSTPG---KPRF--------VAG 122
Query: 123 SIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYLALET---IPAEK 178
SIGP GT L GH D++ +A L VE L GVD + +ET + K
Sbjct: 123 SIGP-GTKL----PTLGHVDFDTLKDAYL-----EQVEGLYDGGVDLMLVETCQDVLQVK 172
Query: 179 EALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-LANPDQIQAIGVNCVR 237
AL ++ + E G + L S + + L+ S + + L + P I +G+NC
Sbjct: 173 AALIAIEEIFEKKGDRLPLMVSVTVEQQGTM--LVGSEIGAALTILEPFGIDILGLNCAT 230
Query: 238 -PSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
P+ + ++ + ++ P + + V PN G+
Sbjct: 231 GPAEMKEHIKYLSENSPFIISCV-PNAGL 258
>gi|399545921|ref|YP_006559229.1| methionine synthase [Marinobacter sp. BSs20148]
gi|399161253|gb|AFP31816.1| Methionine synthase [Marinobacter sp. BSs20148]
Length = 303
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 127/315 (40%), Gaps = 43/315 (13%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
+ V LLDG ++ R LWS + +P+ H DFIR +T S+
Sbjct: 2 RPVVLLDGGLGQEIYRRAANVSSA--LWSVAVMHEQPDVVTAVHSDFIRAGAKTL-SLNT 58
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
Y T + L+ +E L L+ ++ + T A +
Sbjct: 59 YAA----------------TPSRLL--QHGQLEQLATIHQHAFELLGQAVKA-TGACVDI 99
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR--AGVDYLALETIPAEKEALALV 440
G + Y G S DL R LV+ A D L +ET+ EA A
Sbjct: 100 AGCLPPLAGSYQGQPARSFE--DL----RDEYSVLVKQQAVADVLLIETMTNTLEACAAC 153
Query: 441 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 500
E G+ ++F + D GE ++ AV++ +P A+ +NC P +S
Sbjct: 154 AAASEL-GKPFSVAFRLEADGKLRSGETLAEAVSA---VSPYSPTAVMLNCCDPELISAA 209
Query: 501 VRCIKQSHPTV-------QTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNI 553
+ + + HP V +++ +GG+ D++ + D + + H V QWL +G +
Sbjct: 210 MPELVKLHPCVGGYANAFKSVEAMARGGLVDALEARE-DISPQAYVAH-VRQWLADGATV 267
Query: 554 IGGCCEVTSYEIQQM 568
IGGCCE+T ++ +
Sbjct: 268 IGGCCEITPEHVRHI 282
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 101/265 (38%), Gaps = 38/265 (14%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
V LLDG ++ R LWS + +P+ H DFIRAGA + + Y A
Sbjct: 4 VVLLDGGLGQEIYRRAANVSSA--LWSVAVMHEQPDVVTAVHSDFIRAGAKTLSLNTYAA 61
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIE-TAASIG 125
L + G EQ L +H+ F LL ++ T A +
Sbjct: 62 TPSRLLQHGQLEQ--LATIHQ---------------------HAFELLGQAVKATGACVD 98
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR--AGVDYLALETIPAEKEALAL 183
G + Y G S DL R LV+ A D L +ET+ EA A
Sbjct: 99 IAGCLPPLAGSYQGQPARSFE--DL----RDEYSVLVKQQAVADVLLIETMTNTLEACAA 152
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
E G+ ++F + D GE ++ AV++ +P A+ +NC P +S
Sbjct: 153 CAAASEL-GKPFSVAFRLEADGKLRSGETLAEAVSA---VSPYSPTAVMLNCCDPELISA 208
Query: 244 LVRCIKQSHPTVQTIVYPNKGVKLL 268
+ + + HP V K V+ +
Sbjct: 209 AMPELVKLHPCVGGYANAFKSVEAM 233
>gi|159900149|ref|YP_001546396.1| bifunctional homocysteine
S-methyltransferase/5,10-methylenetetrahydrofolate
reductase [Herpetosiphon aurantiacus DSM 785]
gi|159893188|gb|ABX06268.1| homocysteine S-methyltransferase [Herpetosiphon aurantiacus DSM
785]
Length = 617
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 32/260 (12%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ L DG+ +Q+ + +D + ++ LT +P+ E H+ +I AGADII+++ Y
Sbjct: 12 RALLCDGAMGTQLYG---RGIDFDECFDALNLT-QPDVVREIHQSYIEAGADIIETNTYG 67
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
AN L G +++ + H+ ++L A++ + T L+ G ++G
Sbjct: 68 ANRFKLEPFGLADK-VRQINHRGMKLAREARE---------IAGTNTLIAG------AVG 111
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
P G +L+ +TE + L+ G D L ET +E L VK
Sbjct: 112 PLGVLLQP--------YGPLTEQAAHEAFAEQIGTLLEQGADLLMFETFSDLREMLIAVK 163
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVSTL 244
++ + +D T G V + + +GVNC V V +
Sbjct: 164 AAKQVGDLPIVAQMTFAEDGRTVLGNTPEEVVRKLVELG---VAVVGVNCSVGSQRVFRV 220
Query: 245 VRCIKQSHPTVQTIVYPNKG 264
V+ ++ +PT+ PN G
Sbjct: 221 VQSMRAVNPTIPISAQPNAG 240
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 79/202 (39%), Gaps = 14/202 (6%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A ++GP G +L+ +TE + L+ G D L ET +E
Sbjct: 107 AGAVGPLGVLLQP--------YGPLTEQAAHEAFAEQIGTLLEQGADLLMFETFSDLREM 158
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPS 495
L VK ++ + +D T G V + + +GVNC V
Sbjct: 159 LIAVKAAKQVGDLPIVAQMTFAEDGRTVLGNTPEEVVRKLVELG---VAVVGVNCSVGSQ 215
Query: 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEE-GVNII 554
V +V+ ++ +PT+ PN G + + + + EY + Y + +EE V I+
Sbjct: 216 RVFRVVQSMRAVNPTIPISAQPNAGWPTERHNRVFYPSSPEY-MADYARRMVEELNVQIV 274
Query: 555 GGCCEVTSYEIQQMRIMIDEFN 576
GGCC T I M + + N
Sbjct: 275 GGCCGTTPQHISNMHSALQDLN 296
>gi|118444175|ref|YP_878182.1| 5-methyltetrahydrofolate--homocysteine methyltransferase
[Clostridium novyi NT]
gi|118134631|gb|ABK61675.1| 5-methyltetrahydrofolate--homocysteine methyltransferase, putative
[Clostridium novyi NT]
Length = 808
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 16/197 (8%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A IGP G +L + ++ D I + ++A V+AGVD + +ET+ E
Sbjct: 108 ALDIGPIGQLLEP--------MGTLKFEDAINIFKRQIKAGVKAGVDLILIETMTDLYEM 159
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISS-AVTSCLLANPDQIQAIGVNC-VRP 494
A + +E + + S ++D T G L S AVT L + A+GVNC + P
Sbjct: 160 KAAILAAKETCDLPIFATMSFENDGRTFTGCLPESMAVTLEALG----VTAVGVNCSLGP 215
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554
+ +V+ + H + IV PN G+ V+ + L T +YV ++ GV+II
Sbjct: 216 KELKPIVKKTLE-HTNLPVIVQPN-AGLPTIVNGQSLYTITPEEFCNYVESLIDMGVSII 273
Query: 555 GGCCEVTSYEIQQMRIM 571
GGCC T I+ ++ M
Sbjct: 274 GGCCGTTPDFIKCLKSM 290
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 35/223 (15%)
Query: 45 VETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPD 104
++ H+ +I AGA++I ++ + AN L +S + D+++K+V L AK+ N
Sbjct: 52 IDIHKKYIEAGANVITTNTFGANELKLKNTSFSVE---DVIYKAVSLAIKAKEDTN---- 104
Query: 105 INLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 164
F A IGP G +L + ++ D I + ++A V+A
Sbjct: 105 -----CF--------IALDIGPIGQLLEP--------MGTLKFEDAINIFKRQIKAGVKA 143
Query: 165 GVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISS-AVTSCLLA 223
GVD + +ET+ E A + +E + + S ++D T G L S AVT L
Sbjct: 144 GVDLILIETMTDLYEMKAAILAAKETCDLPIFATMSFENDGRTFTGCLPESMAVTLEALG 203
Query: 224 NPDQIQAIGVNC-VRPSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
+ A+GVNC + P + +V+ + H + IV PN G+
Sbjct: 204 ----VTAVGVNCSLGPKELKPIVKKTLE-HTNLPVIVQPNAGL 241
>gi|254419939|ref|ZP_05033663.1| Homocysteine S-methyltransferase, putative [Brevundimonas sp. BAL3]
gi|196186116|gb|EDX81092.1| Homocysteine S-methyltransferase, putative [Brevundimonas sp. BAL3]
Length = 364
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 357 LVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA 416
L RA D +P A SIGP +L S+ + S+T + +R V+A
Sbjct: 122 LARAAADRWTEKEPHKPRFAAGSIGPLNKMLSMSSDVNDPGARSVTFDQVHEAYRHQVKA 181
Query: 417 LVRAGVDYLALETIPAEKEALALVKLLREF--PGQKA---WLSFSCKDDT-HTSHGELIS 470
L GVD +ETI A +K +++ G A W+S + D + T G+
Sbjct: 182 LNEGGVDLYLIETITDTLNCKAAIKAIKDLEDEGMDALPIWISGTITDRSGRTLSGQTAE 241
Query: 471 SAVTSCLLANPDQIQ---AIGVNCVRP--SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDS 525
+ S A P I A+G + +RP + +S + + ++P PN G +D
Sbjct: 242 AFWNSVRHAKPFAIGFNCALGADLMRPFIAELSRVADTLVAAYPNAG---LPNAMGQYD- 297
Query: 526 VHMKWLDTEDEYSILHYVPQWLEEG-VNIIGGCCEVTSYEIQQM 568
E+ + H++ +W G VNI+GGCC T I+ +
Sbjct: 298 --------EEPHETAHFIEEWAASGLVNIVGGCCGTTPDHIKHV 333
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 131/350 (37%), Gaps = 61/350 (17%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD-------------------GHPLWSSVYLTTEPEACVE 46
++ +LDGS+ + R + + D G+ + + T P+ +
Sbjct: 21 RILVLDGSWGVMIQRRGLSEADFRADRFVAANGYDEAQQMKGN---NDILCITRPDIISD 77
Query: 47 THRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKD----KENQT 102
H + AGADI +++ + Q D+ + +L +A D KE
Sbjct: 78 LHDQYYAAGADISETNTFSGTTIAQEDYALDAQAVWDINLEGAKLARAAADRWTEKEPHK 137
Query: 103 PDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV 162
P A SIGP +L S+ + S+T + +R V+AL
Sbjct: 138 PRF--------------AAGSIGPLNKMLSMSSDVNDPGARSVTFDQVHEAYRHQVKALN 183
Query: 163 RAGVDYLALETIPAEKEALALVKLLREF--PGQKA---WLSFSCKDDT-HTSHGELISSA 216
GVD +ETI A +K +++ G A W+S + D + T G+ +
Sbjct: 184 EGGVDLYLIETITDTLNCKAAIKAIKDLEDEGMDALPIWISGTITDRSGRTLSGQTAEAF 243
Query: 217 VTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIV--YPNKGVKLLDGSFTS 274
S A P AIG NC + + + I + T+V YPN G+ G +
Sbjct: 244 WNSVRHAKP---FAIGFNCALGADL--MRPFIAELSRVADTLVAAYPNAGLPNAMGQYDE 298
Query: 275 QV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
+ + H I++ W++ L C T D I+ E A + P
Sbjct: 299 EPHETAHFIEE------WAASGLVNIVGGCCGTTPDHIKHVAEEVAPLKP 342
>gi|410927153|ref|XP_003977029.1| PREDICTED: LOW QUALITY PROTEIN: methionine synthase-like [Takifugu
rubripes]
Length = 1283
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 130/308 (42%), Gaps = 48/308 (15%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD---------GHPLWSSVYLT--TEPEACVETHRDFIRA 54
++ +LDG + + + +++ D HPL + L T P+ + H+D++ A
Sbjct: 45 RIVILDGGMGTMIQQQKLEECDFRGDVFKDHPHPLMGNNDLLSLTRPDIVYKIHKDYLLA 104
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLL 114
GADII+++ + G E A L S +L A D + T + +
Sbjct: 105 GADIIETNTFSGTSVAQADYGL-EHMAYRLNRASAELARKAAD--DVTSQTGVKRY---- 157
Query: 115 TGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI 174
A ++GP L + ++T L+ + V L+ GVD L +ETI
Sbjct: 158 -----VAGALGPTNKTLSVSPSVERPHFRNITFDALVEAYTEQVRGLMDGGVDILLVETI 212
Query: 175 ---PAEKEALALVKLLRE--FPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQI 228
K AL + LL E + + ++S + D + T G+ + + V S ANP
Sbjct: 213 FDTANAKAALFAIDLLFEKSYKRKPIFISGTVVDRSGRTLSGQTVEAFVVSVSHANP--- 269
Query: 229 QAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSF--TSQVSRHT 280
IG+NC +RP + + +C T I YPN G+ G + + +V+
Sbjct: 270 LCIGLNCALGATEMRP-FIEAIGKCT-----TAFVICYPNAGLPNTFGEYDESPEVTASN 323
Query: 281 IKD--VDG 286
+K+ +DG
Sbjct: 324 LKEFSIDG 331
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 135/338 (39%), Gaps = 67/338 (19%)
Query: 265 VKLLDGSFTSQVSRHTIKDVD---------GHPLWSSVYLT--TEPEACVETHRDFIRGH 313
+ +LDG + + + +++ D HPL + L T P+ + H+D++
Sbjct: 46 IVILDGGMGTMIQQQKLEECDFRGDVFKDHPHPLMGNNDLLSLTRPDIVYKIHKDYLLA- 104
Query: 314 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSIS 373
G + + + +SG S+ +AD H L RA + ++
Sbjct: 105 ----------GADIIETNTFSG---TSVAQADYGLEHM--AYRLNRASAELARKAADDVT 149
Query: 374 SQT------AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
SQT A ++GP L + ++T L+ + V L+ GVD L +
Sbjct: 150 SQTGVKRYVAGALGPTNKTLSVSPSVERPHFRNITFDALVEAYTEQVRGLMDGGVDILLV 209
Query: 428 ETI---PAEKEALALVKLLRE--FPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANP 481
ETI K AL + LL E + + ++S + D + T G+ + + V S ANP
Sbjct: 210 ETIFDTANAKAALFAIDLLFEKSYKRKPIFISGTVVDRSGRTLSGQTVEAFVVSVSHANP 269
Query: 482 DQIQAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKG-----GVWDSVHMKW 530
IG+NC +RP + + +C T I YPN G G +D
Sbjct: 270 ---LCIGLNCALGATEMRP-FIEAIGKCT-----TAFVICYPNAGLPNTFGEYDESPEVT 320
Query: 531 LDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
E+SI + VN++GGCC T I+ +
Sbjct: 321 ASNLKEFSI--------DGLVNVVGGCCGTTPEHIRAL 350
>gi|119473799|ref|XP_001258775.1| homocysteine S-methyltransferase, putative [Neosartorya fischeri
NRRL 181]
gi|119406928|gb|EAW16878.1| homocysteine S-methyltransferase, putative [Neosartorya fischeri
NRRL 181]
Length = 313
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 26/181 (14%)
Query: 74 LGYSEQEALDLLHKSVQLMNSAKDK----ENQTPDINLNKTFNLLTGHIETAASIGPYGT 129
+G S + L+L H +V+L A++K EN P + + ++GP
Sbjct: 83 MGLSADKLLELNHAAVRLAKEARNKAVGGENNIP--------------VVISGTMGP--- 125
Query: 130 VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE 189
LRD E + +S+T D +R VE L AGVD LA+ T+ EA+A+V+L +E
Sbjct: 126 -LRDAYEDTS---ESITLEDAREGYREQVEVLADAGVDMLAIMTVTNLNEAIAVVELAKE 181
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 249
+SFS + D G + SA+ + + GVNC P +S +R +
Sbjct: 182 VR-LPVVVSFSIESDGRLLGGRSLESAIRTVDEKTGGYVVYYGVNCAHPVRISAALRDVP 240
Query: 250 Q 250
+
Sbjct: 241 E 241
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 82/192 (42%), Gaps = 24/192 (12%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
+ ++GP LRD E + +S+T D +R VE L AGVD LA+ T+ EA
Sbjct: 120 SGTMGP----LRDAYEDTS---ESITLEDAREGYREQVEVLADAGVDMLAIMTVTNLNEA 172
Query: 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 496
+A+V+L +E +SFS + D G + SA+ + + GVNC P
Sbjct: 173 IAVVELAKEVR-LPVVVSFSIESDGRLLGGRSLESAIRTVDEKTGGYVVYYGVNCAHPVR 231
Query: 497 VSTLVRCIKQSHPTVQTIVYPN----------KGGVWDSVHMKWLDTEDEYSILHYVPQW 546
+S +R + + ++ N G D + T+ +L VP
Sbjct: 232 ISAALRDVPEDVRGRIGLIKGNASLKSHDELDNSGTLDRGDISAF-TDGFEGVLPLVPN- 289
Query: 547 LEEGVNIIGGCC 558
V +IGGCC
Sbjct: 290 ----VKVIGGCC 297
>gi|325106696|ref|YP_004267764.1| homocysteine S-methyltransferase [Planctomyces brasiliensis DSM
5305]
gi|324966964|gb|ADY57742.1| homocysteine S-methyltransferase [Planctomyces brasiliensis DSM
5305]
Length = 293
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 110/264 (41%), Gaps = 33/264 (12%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG ++++ VD P WS+ L PE + HR+++ AGA + ++ ++ +
Sbjct: 17 LLDGPMGTRLAELGYS-VDRQPGWSAQALVDVPELVEQVHREYVAAGATAVTANTFRTHA 75
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
NL G + +A L +VQL A + G S P G
Sbjct: 76 VNLAAWGM-QTKAKSLTSLAVQLARQAAE------------------GKAWVLGSQAPVG 116
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
YS + S E L A HR E L AGVD + LET +++EAL ++ +
Sbjct: 117 DC------YSPNETPSAGE--LRAAHREMAENLNAAGVDAVLLETHVSQQEALIALEAVT 168
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
E G A LS +D+TH G + P AIG NC+ + + +
Sbjct: 169 ET-GLPALLSVVARDETHLLDGSSLQDLAEQAAEYRP---LAIGANCIPVERMGGALNAL 224
Query: 249 KQSHPTVQTIVYPNKGVKLLDGSF 272
QS I Y N G L DGS+
Sbjct: 225 -QSGFAGPLIAYANTGEMLPDGSW 247
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 119/306 (38%), Gaps = 33/306 (10%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
LLDG ++++ VD P WS+ L PE + HR+++ +
Sbjct: 17 LLDGPMGTRLAELGYS-VDRQPGWSAQALVDVPELVEQVHREYVAAGATAVTA------- 68
Query: 327 LRDGSEYSGHYVDSMTEADLIAW-HRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGT 385
+ + H V+ L AW + ++L V LA + S P G
Sbjct: 69 ----NTFRTHAVN------LAAWGMQTKAKSLTSLAVQ-LARQAAEGKAWVLGSQAPVGD 117
Query: 386 VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE 445
YS + S E L A HR E L AGVD + LET +++EAL ++ + E
Sbjct: 118 C------YSPNETPSAGE--LRAAHREMAENLNAAGVDAVLLETHVSQQEALIALEAVTE 169
Query: 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIK 505
G A LS +D+TH G + P AIG NC+ + + +
Sbjct: 170 T-GLPALLSVVARDETHLLDGSSLQDLAEQAAEYRP---LAIGANCIPVERMGGALNAL- 224
Query: 506 QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEI 565
QS I Y N G + + D + +W+ +GV I+G CC I
Sbjct: 225 QSGFAGPLIAYANTGEMLPDGSWRPTAGSDPEVHSEFAQRWISQGVRILGTCCGCGPRWI 284
Query: 566 QQMRIM 571
+++ +
Sbjct: 285 EKISCL 290
>gi|186680613|ref|YP_001863809.1| methionine synthase [Nostoc punctiforme PCC 73102]
gi|186463065|gb|ACC78866.1| methionine synthase [Nostoc punctiforme PCC 73102]
Length = 1177
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 134/336 (39%), Gaps = 48/336 (14%)
Query: 251 SHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD-GHPLWSS-----VYLTTEPEACVE 304
+H ++ + P+ V + DG+ + + + D G P + V+ E EA +
Sbjct: 2 THSFLERLRSPDSPVLVFDGAMGTNLQTQNLTAEDFGGPQYEGCNEYLVHTKPEAEAVAK 61
Query: 305 THRDFIRGH---IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG 361
HRDF+ IET + G VL + Y S T A+L R
Sbjct: 62 VHRDFLAAGADVIETD-TFGSTSLVLAEYDLADQAYYLSKTAAELAK----------RVA 110
Query: 362 VDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG 421
++ KP A SIGP + G ++D T + A EAL G
Sbjct: 111 AEFSTPEKPRF---VAGSIGPTTKLPTLG------HIDFDT---MKATFAEQAEALWDGG 158
Query: 422 VDYLALET---IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLL 478
VD +ET + K AL ++ + G + L S T S G ++ + S +L
Sbjct: 159 VDLFLVETCQDVLQIKAALNGIEEVFAKKGDRRPLMVSV---TMESMGTMLVGSEISAVL 215
Query: 479 A--NPDQIQAIGVNCVR-PSHVSTLVRCIKQSHPTVQTIVYPNKG---GVWDSVHMKWLD 532
A P I +G+NC P + ++ + + P + + + PN G V H +
Sbjct: 216 AILEPYPIDILGLNCATGPDLMKPHIKYLSEHSPFIVSCI-PNAGLPENVGGQAHYRLTP 274
Query: 533 TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
E S++H+V GV +IGGCC IQQ+
Sbjct: 275 LELRMSLMHFVEDL---GVQVIGGCCGTRPEHIQQL 307
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 111/271 (40%), Gaps = 38/271 (14%)
Query: 7 VKLLDGSFTSQVSRHTIKDVD-GHPLWSS-----VYLTTEPEACVETHRDFIRAGADIIQ 60
V + DG+ + + + D G P + V+ E EA + HRDF+ AGAD+I+
Sbjct: 16 VLVFDGAMGTNLQTQNLTAEDFGGPQYEGCNEYLVHTKPEAEAVAKVHRDFLAAGADVIE 75
Query: 61 SSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIET 120
+ + + L + ++Q L K+ + E TP+ F
Sbjct: 76 TDTFGSTSLVLAEYDLADQAY--YLSKTAAELAKRVAAEFSTPE---KPRF--------V 122
Query: 121 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET---IPAE 177
A SIGP + G ++D T + A EAL GVD +ET +
Sbjct: 123 AGSIGPTTKLPTLG------HIDFDT---MKATFAEQAEALWDGGVDLFLVETCQDVLQI 173
Query: 178 KEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA--NPDQIQAIGVNC 235
K AL ++ + G + L S T S G ++ + S +LA P I +G+NC
Sbjct: 174 KAALNGIEEVFAKKGDRRPLMVSV---TMESMGTMLVGSEISAVLAILEPYPIDILGLNC 230
Query: 236 VR-PSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
P + ++ + + P + + + PN G+
Sbjct: 231 ATGPDLMKPHIKYLSEHSPFIVSCI-PNAGL 260
>gi|322421220|ref|YP_004200443.1| homocysteine S-methyltransferase [Geobacter sp. M18]
gi|320127607|gb|ADW15167.1| homocysteine S-methyltransferase [Geobacter sp. M18]
Length = 609
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 97/247 (39%), Gaps = 36/247 (14%)
Query: 39 TEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK 98
PE +E HR+++ AGA +I+++ + AN L+ +G + A ++ K QL SA
Sbjct: 41 VRPELVLELHREYLAAGAQVIETNTFGANYAKLSAIGLGAKVA-EINRKGAQLAKSAAAG 99
Query: 99 ENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNV 158
+ + A SIGP G R SE +G AD R
Sbjct: 100 RD-----------------VFVAGSIGPLG---RGKSELTGEQA-----AD---CFRVQS 131
Query: 159 EALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVT 218
AL GVD L LET E L + RE G S + + G L SA
Sbjct: 132 AALAEGGVDLLILETFSELDELLTALAAARE-TGLPVVASLAFGEGGRLPGGILAESAAQ 190
Query: 219 SCLLANPDQIQAIGVNC-VRPSHVSTLVRCIKQSHPTVQTIVYPNKGV-KLLDGSFTSQV 276
A D +G NC P + VR I + P + YPN G + LDG + +
Sbjct: 191 RLAAAGADL---VGANCGAGPLELLATVRRISAACP-LPLAAYPNSGFPEYLDGRYIYRT 246
Query: 277 SRHTIKD 283
+ D
Sbjct: 247 TPEYFAD 253
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 79/210 (37%), Gaps = 31/210 (14%)
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
A SIGP G R SE +G AD R AL GVD L LET E
Sbjct: 104 VAGSIGPLG---RGKSELTGEQA-----AD---CFRVQSAALAEGGVDLLILETFSELDE 152
Query: 436 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRP 494
L + RE G S + + G L SA A D + G NC P
Sbjct: 153 LLTALAAARE-TGLPVVASLAFGEGGRLPGGILAESAAQRLAAAGADLV---GANCGAGP 208
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEE---- 549
+ VR I + P + YPN G ++LD Y + Y EE
Sbjct: 209 LELLATVRRISAACP-LPLAAYPNSG------FPEYLDGRYIYRTTPEYFADRAEELIAA 261
Query: 550 GVNIIGGCCEVTSYEIQQMRIMIDEFNTKK 579
G +++GGCC T + +++M +K
Sbjct: 262 GASLVGGCCGTTP---EHIKVMAQRLQGRK 288
>gi|194042527|ref|XP_001927093.1| PREDICTED: LOW QUALITY PROTEIN: methionine synthase [Sus scrofa]
Length = 1265
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 121/283 (42%), Gaps = 44/283 (15%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD---------GHPLWSS--VYLTTEPEACVETHRDFIRA 54
++ +LDG + + RH + + D PL + + T+P+ + H+D++ A
Sbjct: 29 RIMVLDGGMGTMIQRHKLSEDDFRGQEFQDHARPLKGNNDILSITQPDIIYQIHKDYLLA 88
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLL 114
GADII+++ + + N+ + Y + ++K SA +I+L
Sbjct: 89 GADIIETNTFSST--NIAQADYGLEHLAYRMNKC-----SAGVARKAAEEISLQTGIKRF 141
Query: 115 TGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI 174
A ++GP L ++T +L+ ++ + L+ GVD L +ETI
Sbjct: 142 -----VAGALGPTNKTLSVSPSVEKPDYRNITFDELVEAYKEQAKGLLDGGVDILLIETI 196
Query: 175 ----PAEKEALALVKLL-REFPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQI 228
A+ A+ KL E+ Q ++S + D + T G+ + V S A+P
Sbjct: 197 FDTANAKAALFAVQKLFEEEYAPQPIFISGTIVDKSGRTLSGQTGEAFVISVSHADP--- 253
Query: 229 QAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
IG+NC +RP + T+ +C T + YPN G+
Sbjct: 254 LCIGLNCALGAAEMRP-FIETIGKCT-----TAYVLCYPNAGL 290
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 137/338 (40%), Gaps = 67/338 (19%)
Query: 265 VKLLDGSFTSQVSRHTIKDVD---------GHPLWSS--VYLTTEPEACVETHRDFIRGH 313
+ +LDG + + RH + + D PL + + T+P+ + H+D++
Sbjct: 30 IMVLDGGMGTMIQRHKLSEDDFRGQEFQDHARPLKGNNDILSITQPDIIYQIHKDYLLA- 88
Query: 314 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL----IK 369
G + + + +S ++ +AD H AGV A ++
Sbjct: 89 ----------GADIIETNTFSS---TNIAQADYGLEHLAYRMNKCSAGVARKAAEEISLQ 135
Query: 370 PSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 429
I A ++GP L ++T +L+ ++ + L+ GVD L +ET
Sbjct: 136 TGIKRFVAGALGPTNKTLSVSPSVEKPDYRNITFDELVEAYKEQAKGLLDGGVDILLIET 195
Query: 430 I----PAEKEALALVKLLRE-FPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQ 483
I A+ A+ KL E + Q ++S + D + T G+ + V S A+P
Sbjct: 196 IFDTANAKAALFAVQKLFEEEYAPQPIFISGTIVDKSGRTLSGQTGEAFVISVSHADP-- 253
Query: 484 IQAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKG-----GVWDSV-HMKWL 531
IG+NC +RP + T+ +C T + YPN G G +D HM +
Sbjct: 254 -LCIGLNCALGAAEMRP-FIETIGKCT-----TAYVLCYPNAGLPNTFGDYDETPHMMAM 306
Query: 532 DTEDEYSILHYVPQWLEEG-VNIIGGCCEVTSYEIQQM 568
+D + +G VNI+GGCC T I+++
Sbjct: 307 HLKD----------FATDGLVNIVGGCCGTTPAHIREI 334
>gi|254479580|ref|ZP_05092892.1| Homocysteine S-methyltransferase domain protein [Carboxydibrachium
pacificum DSM 12653]
gi|214034483|gb|EEB75245.1| Homocysteine S-methyltransferase domain protein [Carboxydibrachium
pacificum DSM 12653]
Length = 803
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 20/230 (8%)
Query: 353 NVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRP 412
VE +V GV+ K + A S+GP G +L + + D E +
Sbjct: 80 KVEEIVTKGVEIAR--KAAGDRPVALSVGPTGELL---APFGDMTFDEAYEV-----FKE 129
Query: 413 NVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSA 472
V A +AG D + +ET+ EA A + +E K + + ++D T G S
Sbjct: 130 VVVAAEKAGADIVIIETMSDMLEAKAAILAAKENTNMKVICTMTFQEDGRTLMG---SDP 186
Query: 473 VTSCLLANPDQIQAIGVNC-VRPSHVSTLVRCIKQSHPTVQTIVYPNKGG--VWDSVHMK 529
VT + + AIGVNC P + +V + Q + I PN G + D +
Sbjct: 187 VTVVVSLQGLGLDAIGVNCSTGPDKMVKVVEKMAQVA-RIPIIAQPNAGMPVIRDGKTVY 245
Query: 530 WLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEFNTKK 579
L E+ S + PQ +E+G I+GGCC T Y I+ ++ ++ KK
Sbjct: 246 DLKPEEFAS---FFPQLVEKGACIVGGCCGTTPYYIKLVKKAVENLKPKK 292
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 124/300 (41%), Gaps = 46/300 (15%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V + DG+ +Q+ +K + P + ++ + PE + H+ +I AGA++I+++ +
Sbjct: 11 RVVVFDGAMGTQLQERGLKAGE-CPEYINLKM---PEVVFDIHKAYIEAGAEVIETNTFG 66
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
AN L K G E + +++ K V++ A G A S+G
Sbjct: 67 ANRIKLAKYGL-EDKVEEIVTKGVEIARKA-------------------AGDRPVALSVG 106
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
P G +L + + D E + V A +AG D + +ET+ EA A +
Sbjct: 107 PTGELL---APFGDMTFDEAYEV-----FKEVVVAAEKAGADIVIIETMSDMLEAKAAIL 158
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVSTL 244
+E K + + ++D T G S VT + + AIGVNC P + +
Sbjct: 159 AAKENTNMKVICTMTFQEDGRTLMG---SDPVTVVVSLQGLGLDAIGVNCSTGPDKMVKV 215
Query: 245 VRCIKQSHPTVQTIVYPNKGVKLL-DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACV 303
V + Q + I PN G+ ++ DG T+ D+ S E AC+
Sbjct: 216 VEKMAQVA-RIPIIAQPNAGMPVIRDG--------KTVYDLKPEEFASFFPQLVEKGACI 266
>gi|417515535|gb|JAA53594.1| 5-methyltetrahydrofolate-homocysteine methyltransferase [Sus
scrofa]
Length = 1264
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 121/283 (42%), Gaps = 44/283 (15%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD---------GHPLWSS--VYLTTEPEACVETHRDFIRA 54
++ +LDG + + RH + + D PL + + T+P+ + H+D++ A
Sbjct: 28 RIMVLDGGMGTMIQRHKLSEDDFRGQEFQDHARPLKGNNDILSITQPDIIYQIHKDYLLA 87
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLL 114
GADII+++ + + N+ + Y + ++K SA +I+L
Sbjct: 88 GADIIETNTFSST--NIAQADYGLEHLAYRMNKC-----SAGVARKAAEEISLQTGIKRF 140
Query: 115 TGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI 174
A ++GP L ++T +L+ ++ + L+ GVD L +ETI
Sbjct: 141 -----VAGALGPTNKTLSVSPSVEKPDYRNITFDELVEAYKEQAKGLLDGGVDILLIETI 195
Query: 175 ----PAEKEALALVKLL-REFPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQI 228
A+ A+ KL E+ Q ++S + D + T G+ + V S A+P
Sbjct: 196 FDTANAKAALFAVQKLFEEEYAPQPIFISGTIVDKSGRTLSGQTGEAFVISVSHADP--- 252
Query: 229 QAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
IG+NC +RP + T+ +C T + YPN G+
Sbjct: 253 LCIGLNCALGAAEMRP-FIETIGKCT-----TAYVLCYPNAGL 289
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 137/338 (40%), Gaps = 67/338 (19%)
Query: 265 VKLLDGSFTSQVSRHTIKDVD---------GHPLWSS--VYLTTEPEACVETHRDFIRGH 313
+ +LDG + + RH + + D PL + + T+P+ + H+D++
Sbjct: 29 IMVLDGGMGTMIQRHKLSEDDFRGQEFQDHARPLKGNNDILSITQPDIIYQIHKDYLLA- 87
Query: 314 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL----IK 369
G + + + +S ++ +AD H AGV A ++
Sbjct: 88 ----------GADIIETNTFSS---TNIAQADYGLEHLAYRMNKCSAGVARKAAEEISLQ 134
Query: 370 PSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 429
I A ++GP L ++T +L+ ++ + L+ GVD L +ET
Sbjct: 135 TGIKRFVAGALGPTNKTLSVSPSVEKPDYRNITFDELVEAYKEQAKGLLDGGVDILLIET 194
Query: 430 I----PAEKEALALVKLLRE-FPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQ 483
I A+ A+ KL E + Q ++S + D + T G+ + V S A+P
Sbjct: 195 IFDTANAKAALFAVQKLFEEEYAPQPIFISGTIVDKSGRTLSGQTGEAFVISVSHADP-- 252
Query: 484 IQAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKG-----GVWDSV-HMKWL 531
IG+NC +RP + T+ +C T + YPN G G +D HM +
Sbjct: 253 -LCIGLNCALGAAEMRP-FIETIGKCT-----TAYVLCYPNAGLPNTFGDYDETPHMMAM 305
Query: 532 DTEDEYSILHYVPQWLEEG-VNIIGGCCEVTSYEIQQM 568
+D + +G VNI+GGCC T I+++
Sbjct: 306 HLKD----------FATDGLVNIVGGCCGTTPAHIREI 333
>gi|381204842|ref|ZP_09911913.1| hypothetical protein SclubJA_04385 [SAR324 cluster bacterium
JCVI-SC AAA005]
Length = 291
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 101/236 (42%), Gaps = 35/236 (14%)
Query: 30 PLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSV 89
PLWS+ L P+ E H+DFI+AGAD+I S Y A L K Y+ Q+ + L K+
Sbjct: 15 PLWSADVLRDHPDLVAEVHQDFIQAGADVITLSSYAATPTRLAK--YNRQDEFEALQKAA 72
Query: 90 QLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEAD 149
+N+AK + D+ L+ L+ G + G Y R GS+ S + E
Sbjct: 73 --INAAKQACD---DMGLS---TLIAGSLPPLP--GSYRPSERLGSQLSQQEYQQILEQQ 122
Query: 150 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSC--KDDTHT 207
VD ET+ + +EA + + G W +F+ KD +
Sbjct: 123 Y-------------KHVDLFLCETMASIEEACISTSVAMK-SGLPVWTAFTVNEKDGSFL 168
Query: 208 SHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTI-VYPN 262
GELI A + L + A+ VNC P T + + + P V+T+ Y N
Sbjct: 169 RSGELIVKAAQAVL---AEGASALLVNCSTP---ETTTQALSELAPHVKTMGAYAN 218
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 125/312 (40%), Gaps = 62/312 (19%)
Query: 288 PLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLI 347
PLWS+ L P+ E H+DFI+ G + S Y+ T L
Sbjct: 15 PLWSADVLRDHPDLVAEVHQDFIQA-----------GADVITLSSYAA------TPTRLA 57
Query: 348 AWHRPN-VEALVRAGVDYL--ALIKPSISSQTAASIGP----YGTVLRDGSEYSGHYVDS 400
++R + EAL +A ++ A +S+ A S+ P Y R GS+ S
Sbjct: 58 KYNRQDEFEALQKAAINAAKQACDDMGLSTLIAGSLPPLPGSYRPSERLGSQLSQQEYQQ 117
Query: 401 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSC--K 458
+ E VD ET+ + +EA + + G W +F+ K
Sbjct: 118 ILEQQY-------------KHVDLFLCETMASIEEACISTSVAMK-SGLPVWTAFTVNEK 163
Query: 459 DDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTI---- 514
D + GELI A + L + A+ VNC P T + + + P V+T+
Sbjct: 164 DGSFLRSGELIVKAAQAVL---AEGASALLVNCSTP---ETTTQALSELAPHVKTMGAYA 217
Query: 515 -----VYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMR 569
V P +G V +K + ++ + +WL +G I+GGCCE+ I+++R
Sbjct: 218 NGFLTVEPYQGHATVDV-LKSRQEINPHTYAEFAQEWLSKGAKILGGCCEIGPEHIEKIR 276
Query: 570 IMIDEFNTKKND 581
N ++ND
Sbjct: 277 ------NLRQND 282
>gi|20808220|ref|NP_623391.1| methionine synthase I cobalamin-binding subunit [Thermoanaerobacter
tengcongensis MB4]
gi|20516815|gb|AAM24995.1| Methionine synthase I, cobalamin-binding domain protein
[Thermoanaerobacter tengcongensis MB4]
Length = 803
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 20/230 (8%)
Query: 353 NVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRP 412
VE +V GV+ K + A S+GP G +L + + D E +
Sbjct: 80 KVEEIVTKGVEIAR--KAAGDRPVALSVGPTGELL---APFGDMTFDEAYEV-----FKE 129
Query: 413 NVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSA 472
V A +AG D + +ET+ EA A + +E K + + ++D T G S
Sbjct: 130 VVVAAEKAGADIVIIETMSDMLEAKAAILAAKENTNMKVICTMTFQEDGRTLMG---SDP 186
Query: 473 VTSCLLANPDQIQAIGVNC-VRPSHVSTLVRCIKQSHPTVQTIVYPNKGG--VWDSVHMK 529
VT + + AIGVNC P + +V + Q + I PN G + D +
Sbjct: 187 VTVVVSLQGLGLDAIGVNCSTGPDKMVKVVEKMAQVA-RIPIIAQPNAGMPVIRDGKTVY 245
Query: 530 WLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEFNTKK 579
L E+ S + PQ +E+G I+GGCC T Y I+ ++ ++ KK
Sbjct: 246 DLKPEEFAS---FFPQLVEKGACIVGGCCGTTPYYIKLVKKAVENLKPKK 292
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 124/300 (41%), Gaps = 46/300 (15%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V + DG+ +Q+ +K + P + ++ + PE + H+ +I AGA++I+++ +
Sbjct: 11 RVVVFDGAMGTQLQERGLKAGE-CPEYINLKM---PEVVFDIHKAYIEAGAEVIETNTFG 66
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
AN L K G E + +++ K V++ A G A S+G
Sbjct: 67 ANRIKLAKYGL-EDKVEEIVTKGVEIARKA-------------------AGDRPVALSVG 106
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
P G +L + + D E + V A +AG D + +ET+ EA A +
Sbjct: 107 PTGELL---APFGDMTFDEAYEV-----FKEVVVAAEKAGADIVIIETMSDMLEAKAAIL 158
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVSTL 244
+E K + + ++D T G S VT + + AIGVNC P + +
Sbjct: 159 AAKENTNMKVICTMTFQEDGRTLMG---SDPVTVVVSLQGLGLDAIGVNCSTGPDKMVKV 215
Query: 245 VRCIKQSHPTVQTIVYPNKGVKLL-DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACV 303
V + Q + I PN G+ ++ DG T+ D+ S E AC+
Sbjct: 216 VEKMAQVA-RIPIIAQPNAGMPVIRDG--------KTVYDLKPEEFASFFPQLVEKGACI 266
>gi|300865649|ref|ZP_07110421.1| methionine synthase (B12-dependent) [Oscillatoria sp. PCC 6506]
gi|300336350|emb|CBN55571.1| methionine synthase (B12-dependent) [Oscillatoria sp. PCC 6506]
Length = 1244
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 140/330 (42%), Gaps = 46/330 (13%)
Query: 255 VQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD-GHPLW---SSVYLTTEPEACVETHRDFI 310
+Q + +P++ V + DG+ + + + D G P + + + T PEA + HR F+
Sbjct: 7 LQRLHHPSRPVIVFDGAMGTNLQFQNLTAEDFGGPQYEGCNEYLIYTNPEAVAKVHRGFL 66
Query: 311 RGH---IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG--VDYL 365
IET + G VL +EY+ + + A++ A + G ++Y
Sbjct: 67 EAGADVIETD-TFGASSFVL---AEYN------LAQE---AYNLNKAAATLAKGLAIEYS 113
Query: 366 ALIKPSISSQTAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDY 424
KP A SIGP GT L GH D++ IA+ E L GVD
Sbjct: 114 TPEKPRF---VAGSIGP-GTKL----PTLGHIDFDTLK----IAFAE-QAEGLFDGGVDL 160
Query: 425 LALETIPAEKEALALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-LANPD 482
L +ET + A + + E F + L T+ L+ S +++ L + P
Sbjct: 161 LIVETCQDVLQIKAALSAIEEVFAKKGTRLPIMVSVTMETTGTMLVGSDISAVLTILQPF 220
Query: 483 QIQAIGVNCVR-PSHVSTLVRCIKQSHPTVQTIVYPNKG---GVWDSVHMKWLDTEDEYS 538
I +G+NC P ++ ++ + Q P V + + PN G V H K E +
Sbjct: 221 PIDILGLNCATGPDRMAEHIKYLSQYSPFVVSCI-PNAGLPENVGGHAHYKLTPMELRMA 279
Query: 539 ILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
++H+V GV +IGGCC IQQ+
Sbjct: 280 LMHFVEDL---GVQVIGGCCGTRYDHIQQL 306
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 7 VKLLDGSFTSQVSRHTIKDVD-GHPLW---SSVYLTTEPEACVETHRDFIRAGADIIQSS 62
V + DG+ + + + D G P + + + T PEA + HR F+ AGAD+I++
Sbjct: 17 VIVFDGAMGTNLQFQNLTAEDFGGPQYEGCNEYLIYTNPEAVAKVHRGFLEAGADVIETD 76
Query: 63 CYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAA 122
+ A+ L + + QEA + L+K+ + E TP+ F A
Sbjct: 77 TFGASSFVLAEYNLA-QEAYN-LNKAAATLAKGLAIEYSTPE---KPRF--------VAG 123
Query: 123 SIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
SIGP GT L GH D++ IA+ E L GVD L +ET +
Sbjct: 124 SIGP-GTKL----PTLGHIDFDTLK----IAFAE-QAEGLFDGGVDLLIVETCQDVLQIK 173
Query: 182 ALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-LANPDQIQAIGVNCVR-P 238
A + + E F + L T+ L+ S +++ L + P I +G+NC P
Sbjct: 174 AALSAIEEVFAKKGTRLPIMVSVTMETTGTMLVGSDISAVLTILQPFPIDILGLNCATGP 233
Query: 239 SHVSTLVRCIKQSHPTVQTIVYPNKGV 265
++ ++ + Q P V + + PN G+
Sbjct: 234 DRMAEHIKYLSQYSPFVVSCI-PNAGL 259
>gi|22255848|gb|AAM94773.1| CalE2 [Micromonospora echinospora]
Length = 304
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 417 LVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSC 476
L RAGVD +ET+ +EA+ + +RE G AW+SF C D GE +++A +
Sbjct: 144 LARAGVDLALVETMNTVREAVVATRAVREH-GLPAWVSFVCTGDARLLSGEDLAAAADAV 202
Query: 477 LLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPN---KGGVWDSVHM-KWLD 532
A + VNC P+ +R ++ + P + YPN + GV + + ++L
Sbjct: 203 RAAGAAAVL---VNCTDPAGTERALRRLRAAGPGLLG-AYPNVEDRSGVPPATPVDRYLP 258
Query: 533 ---TEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMR 569
T D ++ L W G+ I+GGCC T I +R
Sbjct: 259 PGLTPDAFADLWAA--WRPVGLRIVGGCCGTTPAHIAALR 296
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 104/257 (40%), Gaps = 32/257 (12%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYL--TTEPEACVETHRDFIRAGADIIQSSCYQA 66
+LDG +++ RH + V P W++ L H ++ AGAD++ + ++
Sbjct: 13 VLDGGLGTELQRHG-RSVSA-PWWTARCLLDAGGRRLVSRVHAAYVAAGADVLTADTFRT 70
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ + G E A L+ +V L A D + AAS+ P
Sbjct: 71 TLRTAYRAGTDEATAAGLVRTAVTLARRAADSTGAG-------------RRVLVAASVAP 117
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAW-HRPNVEALVRAGVDYLALETIPAEKEALALVK 185
R D + A ++ H + L RAGVD +ET+ +EA+ +
Sbjct: 118 VEDCYRP---------DLVPGAAVLRREHGWLADQLARAGVDLALVETMNTVREAVVATR 168
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
+RE G AW+SF C D GE +++A + A + VNC P+ +
Sbjct: 169 AVREH-GLPAWVSFVCTGDARLLSGEDLAAAADAVRAAGAAAVL---VNCTDPAGTERAL 224
Query: 246 RCIKQSHPTVQTIVYPN 262
R ++ + P + YPN
Sbjct: 225 RRLRAAGPGLLG-AYPN 240
>gi|410626335|ref|ZP_11337098.1| homocysteine S-methyltransferase [Glaciecola mesophila KMM 241]
gi|410154155|dbj|GAC23867.1| homocysteine S-methyltransferase [Glaciecola mesophila KMM 241]
Length = 311
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 133/317 (41%), Gaps = 39/317 (12%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ +LDG ++ R + ++V P+WS+ + EPE + HR+FI
Sbjct: 19 ITILDGGMGQELLRRSSREVT--PMWSADIMLNEPELVRDLHREFIDSGARVITLNTYTA 76
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
T R E + + A + R EA+ + D +A+ A S+ P
Sbjct: 77 TPQRLKRENQFEQLTHLHHAAM----RVAQEAIELSQRDDVAI---------AGSLPPL- 122
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
V E S Y EA L+++ + + AL D ET+ + EA A +
Sbjct: 123 -VASYHPEVSLSY-----EASLMSYRQ--LVALQSPASDIFICETMSSICEAQAACTAAK 174
Query: 445 EFPGQKAWLSFSCKDD--THTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 502
E G+ W++FS D GE + A+ + P+ AI +NC +P +S
Sbjct: 175 E-SGKPVWVAFSVSDSHPEQLRSGESLKEALAALETLAPE---AILLNCSQPEAISACWP 230
Query: 503 CIKQSHPTVQTIVYPNKGGVWDSVH----MKWLDTEDEYSILHYVP---QWLEEGVNIIG 555
++ S + Y N D+++ ++ L+ ++ S HY W++ G +IIG
Sbjct: 231 LMQASGAKIGA--YANGFVSIDALYPGDTVEALEMRNDLSPAHYAAHAMNWVDNGASIIG 288
Query: 556 GCCEVTSYEIQQMRIMI 572
GCCE+ I+ + + +
Sbjct: 289 GCCEIGPAHIKALALKL 305
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 32/244 (13%)
Query: 2 SKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQS 61
S + + +LDG ++ R + ++V P+WS+ + EPE + HR+FI +GA +I
Sbjct: 14 SLMSTITILDGGMGQELLRRSSREVT--PMWSADIMLNEPELVRDLHREFIDSGARVITL 71
Query: 62 SCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETA 121
+ Y A L + EQ L LH + + + +Q D+ + + L
Sbjct: 72 NTYTATPQRLKRENQFEQ--LTHLHHAAMRVAQEAIELSQRDDVAIAGSLPPLV------ 123
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
AS P E S Y EA L+++ + + AL D ET+ + EA
Sbjct: 124 ASYHP---------EVSLSY-----EASLMSYRQ--LVALQSPASDIFICETMSSICEAQ 167
Query: 182 ALVKLLREFPGQKAWLSFSCKDD--THTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 239
A +E G+ W++FS D GE + A+ + P+ AI +NC +P
Sbjct: 168 AACTAAKE-SGKPVWVAFSVSDSHPEQLRSGESLKEALAALETLAPE---AILLNCSQPE 223
Query: 240 HVST 243
+S
Sbjct: 224 AISA 227
>gi|319783028|ref|YP_004142504.1| homocysteine S-methyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168916|gb|ADV12454.1| homocysteine S-methyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 301
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 101/243 (41%), Gaps = 40/243 (16%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
K+ L DG ++ R + + PLWS+ L EP+ + H +FIRAGA +I + Y
Sbjct: 3 KIILTDGGMGQELVRRSQSEPT--PLWSARVLIDEPDLVRDLHAEFIRAGARVITINTYS 60
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
A + L + G +E L + ++L A+D+ G A +
Sbjct: 61 ATPERLAREG-AEDLFKPLQKRGIELARQARDE----------------AGDAAIAGCLS 103
Query: 126 PYGTVLRDGSEYSGHYVDSMT---EADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
P G Y ++T E L + R + A GVD ET+ + EA A
Sbjct: 104 P----------LFGSYAPALTISFEETLEIYRR--IVAEQADGVDLFLCETMASADEARA 151
Query: 183 LVKLLREFPGQKAWLSFSCKD--DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH 240
V E G+ W+S++ D GE I++A ++ + + A VNC RP
Sbjct: 152 AVTAASE-SGKPVWVSWTLADHGKPRLRSGEAIATAASAL---DGLAVAARLVNCCRPEA 207
Query: 241 VST 243
++
Sbjct: 208 IAA 210
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 133/331 (40%), Gaps = 61/331 (18%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
K + L DG ++ R + + PLWS+ L EP+ + H +FIR +I
Sbjct: 2 KKIILTDGGMGQELVRRSQSEPT--PLWSARVLIDEPDLVRDLHAEFIRAGARVI-TINT 58
Query: 323 YGT----VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAA 378
Y + R+G+E DL + L + G++ L + + A
Sbjct: 59 YSATPERLAREGAE------------DLF-------KPLQKRGIE---LARQARDEAGDA 96
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMT---EADLIAWHRPNVEALVRAGVDYLALETIPAEKE 435
+I G + S G Y ++T E L + R + A GVD ET+ + E
Sbjct: 97 AIA--GCL----SPLFGSYAPALTISFEETLEIYRR--IVAEQADGVDLFLCETMASADE 148
Query: 436 ALALVKLLREFPGQKAWLSFSCKD--DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
A A V E G+ W+S++ D GE I++A ++ + + A VNC R
Sbjct: 149 ARAAVTAASE-SGKPVWVSWTLADHGKPRLRSGEAIATAASAL---DGLAVAARLVNCCR 204
Query: 494 PSHVST-LVRCIKQSHPTVQTIVYPNK---------GGVWDSVHMKWLDTEDEYSILHYV 543
P ++ L I P Y N GG D +H + D Y+
Sbjct: 205 PEAIAAALPELIGLGGPVG---AYANGFTSTEALKHGGTVDVLHARHDLGPDAYA--DQA 259
Query: 544 PQWLEEGVNIIGGCCEVTSYEIQQMRIMIDE 574
W+E G +I+GGCCEV I +R +++
Sbjct: 260 IGWVEAGASIVGGCCEVGPPHIAALRDRLEQ 290
>gi|302383429|ref|YP_003819252.1| homocysteine S-methyltransferase [Brevundimonas subvibrioides ATCC
15264]
gi|302194057|gb|ADL01629.1| homocysteine S-methyltransferase [Brevundimonas subvibrioides ATCC
15264]
Length = 356
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 24/235 (10%)
Query: 357 LVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA 416
L RA D +P A SIGP +L S+ + +T + +R V+A
Sbjct: 114 LARASADRWTEKEPHKPRFAAGSIGPLNKMLSMSSDVNDPGARLVTFDQVYDAYRHQVKA 173
Query: 417 LVRAGVDYLALETIPAEKEALALVKLLREF--PGQKA---WLSFSCKDDT-HTSHGELIS 470
L GVD +ETI A +K +++ G +A W+S + D + T G+
Sbjct: 174 LNEGGVDLYLIETITDTLNCKAAIKAIKDLEDEGMEALPIWISGTITDRSGRTLSGQTAE 233
Query: 471 SAVTSCLLANPDQIQ---AIGVNCVRP--SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDS 525
+ S A P + A+G + +RP + +S + + ++P PN G +D
Sbjct: 234 AFWNSVRHAKPFAVGFNCALGADLMRPFIAELSRVADTLVAAYPNAG---LPNAMGQYD- 289
Query: 526 VHMKWLDTEDEYSILHYVPQWLEEG-VNIIGGCCEVTSYEIQQMRIMIDEFNTKK 579
E+ + H++ +W G VNI+GGCC T I+ + + T++
Sbjct: 290 --------EEPHQTAHFIEEWAASGLVNIVGGCCGTTPDHIKHTAEAVSKLPTRE 336
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 131/342 (38%), Gaps = 51/342 (14%)
Query: 6 KVKLLDGSFTSQVSRHTI--KDVDGHPLWS---------SVYLTTEPEACVETHRDFIRA 54
++ +LDGS+ + R + +D G + + T P+ + H + A
Sbjct: 18 RILVLDGSWGVMIQRAELSEEDFRGDRFTAHEGQMKGNNDILCITRPDVIGDLHDQYFAA 77
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKD----KENQTPDINLNKT 110
GADI +++ + A V D+ + +L ++ D KE P
Sbjct: 78 GADISETNTFSATVIAQDDYKLEADAVWDINLEGAKLARASADRWTEKEPHKPRF----- 132
Query: 111 FNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 170
A SIGP +L S+ + +T + +R V+AL GVD
Sbjct: 133 ---------AAGSIGPLNKMLSMSSDVNDPGARLVTFDQVYDAYRHQVKALNEGGVDLYL 183
Query: 171 LETIPAEKEALALVKLLREF--PGQKA---WLSFSCKDDT-HTSHGELISSAVTSCLLAN 224
+ETI A +K +++ G +A W+S + D + T G+ + S A
Sbjct: 184 IETITDTLNCKAAIKAIKDLEDEGMEALPIWISGTITDRSGRTLSGQTAEAFWNSVRHAK 243
Query: 225 PDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIV--YPNKGVKLLDGSFTSQ--VSRHT 280
P A+G NC + + + I + T+V YPN G+ G + + + H
Sbjct: 244 P---FAVGFNCALGADL--MRPFIAELSRVADTLVAAYPNAGLPNAMGQYDEEPHQTAHF 298
Query: 281 IKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
I++ W++ L C T D I+ H A S P
Sbjct: 299 IEE------WAASGLVNIVGGCCGTTPDHIK-HTAEAVSKLP 333
>gi|345304260|ref|YP_004826162.1| methionine synthase [Rhodothermus marinus SG0.5JP17-172]
gi|345113493|gb|AEN74325.1| methionine synthase [Rhodothermus marinus SG0.5JP17-172]
Length = 1236
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 120/283 (42%), Gaps = 42/283 (14%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD---------GHPLWSS--VYLTTEPEACVETHRDFIRA 54
++ +LDG+ + + RH + + D HPL + + + T+PE + HR ++ A
Sbjct: 14 RILILDGAMGTMIQRHRLSEEDFRGARFADHPHPLRGNNDLLVLTQPELIRDIHRAYLEA 73
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKE--NQTPDINLNKTFN 112
GAD+I+++ + AN +++ Y + + L+ + + E +TP+ F
Sbjct: 74 GADLIETNTFNANA--ISQADYGLEHLVYELNVAAARLAREAADEFTRRTPE---RPRF- 127
Query: 113 LLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE 172
A +IGP L + + ++T +++A +R V L+ GVD L +E
Sbjct: 128 -------VAGAIGPTNKTLSISPDVNNPAYRAVTFDEMVAVYREQVRGLLDGGVDVLLVE 180
Query: 173 TIPAEKE-ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL---LANPDQI 228
T+ AL + EF + + G +S +A+ +
Sbjct: 181 TVFDTLNCKAALFAIQEEFRARARAVPVMVSGTIVDQSGRTLSGQTPEAFWISIAHMPHL 240
Query: 229 QAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
++G+NC +RP + L R TV T +YPN G+
Sbjct: 241 LSVGLNCALGSGQMRP-FIEELARVA-----TVFTSLYPNAGL 277
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 138/347 (39%), Gaps = 52/347 (14%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD---------GHPLWSS--VYLT 296
++ +HP + + + + +LDG+ + + RH + + D HPL + + +
Sbjct: 1 MRDTHPLARLL---QERILILDGAMGTMIQRHRLSEEDFRGARFADHPHPLRGNNDLLVL 57
Query: 297 TEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWH---RPN 353
T+PE RD R ++E A D E + +++++AD H N
Sbjct: 58 TQPELI----RDIHRAYLEAGA----------DLIETNTFNANAISQADYGLEHLVYELN 103
Query: 354 VEALVRAGV--DYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHR 411
V A A D P A +IGP L + + ++T +++A +R
Sbjct: 104 VAAARLAREAADEFTRRTPERPRFVAGAIGPTNKTLSISPDVNNPAYRAVTFDEMVAVYR 163
Query: 412 PNVEALVRAGVDYLALETIPAEKE-ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELIS 470
V L+ GVD L +ET+ AL + EF + + G +S
Sbjct: 164 EQVRGLLDGGVDVLLVETVFDTLNCKAALFAIQEEFRARARAVPVMVSGTIVDQSGRTLS 223
Query: 471 SAVTSCL---LANPDQIQAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKGG 521
+A+ + ++G+NC +RP + L R TV T +YPN G
Sbjct: 224 GQTPEAFWISIAHMPHLLSVGLNCALGSGQMRP-FIEELARVA-----TVFTSLYPN-AG 276
Query: 522 VWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+ D + ++ +T EY E +N+ GGCC T I+ +
Sbjct: 277 LPDELG-QYRETP-EYMAAQLADYAREGWLNLAGGCCGTTPEHIRAI 321
>gi|398366105|ref|NP_014054.3| hypothetical protein YMR321C [Saccharomyces cerevisiae S288c]
gi|2497229|sp|Q04898.1|YM99_YEAST RecName: Full=Putative uncharacterized protein YMR321C
gi|1072411|emb|CAA90839.1| unknown [Saccharomyces cerevisiae]
gi|285814327|tpg|DAA10222.1| TPA: hypothetical protein YMR321C [Saccharomyces cerevisiae S288c]
gi|392297495|gb|EIW08595.1| hypothetical protein CENPK1137D_365 [Saccharomyces cerevisiae
CEN.PK113-7D]
Length = 105
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-S 538
NP+ + +G+NCV + ++ + Q+ P + + YPN G V+D+ WL D+ S
Sbjct: 9 NPN-LSFLGINCVSFNQSPDILESLHQALPNMALLAYPNSGEVYDTEKKIWLPNSDKLNS 67
Query: 539 ILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEF 575
V Q++ G IIGGCC + +IQ++ + ++
Sbjct: 68 WDTVVKQYISSGARIIGGCCRTSPKDIQEISAAVKKY 104
>gi|384083739|ref|ZP_09994914.1| homocysteine S-methyltransferase [gamma proteobacterium HIMB30]
Length = 316
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 126/321 (39%), Gaps = 48/321 (14%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
K + LLDG ++ + + D HPLWS + + P+ + + DF+ +
Sbjct: 7 KEITLLDGGIGQEIHHRSTRG-DPHPLWSVMVMREAPDVVIRVYEDFLNAGAKVLTLNTY 65
Query: 323 YGTVLR---DGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAAS 379
T +R G E +++ EA + + RA + + + P +S A +
Sbjct: 66 TATPIRLKNQGMESELNHIHQ--EASALVDQAIQQSRVARARISKMGCLPPLAASYVAEA 123
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY---LALETIPAEKEA 436
Y A R + E L+ A +DY +ET+ E
Sbjct: 124 APDY------------------------AKARSDYERLIEAQIDYVDGFLVETMSNTVEM 159
Query: 437 LALVKLLREFPGQKAWLSFSCKDD--THTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
A L GQ + + +DD GE +S A+ L P I+++ +NC +P
Sbjct: 160 TAARDALVT-AGQPVRIGLTVEDDGTNRLRSGEPLSKAIEE-LSKGP--IESLLINCSQP 215
Query: 495 SHVSTL------VRCIKQSHPTVQTIVYPNK-GGVWDSVHMKWLDTEDEYSILHYVPQWL 547
V+ + C ++ T + P + GG + + ++Y+ YV W+
Sbjct: 216 EVVNRAFDELRKLGCSYGAYANGFTTIAPLRPGGTVKELEYRVDLGPEKYT--DYVLNWI 273
Query: 548 EEGVNIIGGCCEVTSYEIQQM 568
E G I+GGCCE++ I+ +
Sbjct: 274 ESGATIVGGCCEISPAHIEHI 294
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 99/248 (39%), Gaps = 47/248 (18%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ LLDG ++ + + D HPLWS + + P+ + + DF+ AGA ++ + Y
Sbjct: 8 EITLLDGGIGQEIHHRSTRG-DPHPLWSVMVMREAPDVVIRVYEDFLNAGAKVLTLNTYT 66
Query: 66 ANVDNL------TKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIE 119
A L ++L + QEA L+ +++Q A+
Sbjct: 67 ATPIRLKNQGMESELNHIHQEASALVDQAIQQSRVAR----------------------- 103
Query: 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY---LALETIPA 176
A I G + + Y +A R + E L+ A +DY +ET+
Sbjct: 104 --ARISKMGCLPPLAASYVAEAAPDYAKA------RSDYERLIEAQIDYVDGFLVETMSN 155
Query: 177 EKEALALVKLLREFPGQKAWLSFSCKDD--THTSHGELISSAVTSCLLANPDQIQAIGVN 234
E A L GQ + + +DD GE +S A+ L P I+++ +N
Sbjct: 156 TVEMTAARDALVT-AGQPVRIGLTVEDDGTNRLRSGEPLSKAIEE-LSKGP--IESLLIN 211
Query: 235 CVRPSHVS 242
C +P V+
Sbjct: 212 CSQPEVVN 219
>gi|328857595|gb|EGG06711.1| hypothetical protein MELLADRAFT_26682 [Melampsora larici-populina
98AG31]
Length = 358
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 119/284 (41%), Gaps = 59/284 (20%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
LLDG + ++ ++D LWS+ L PE H+ + +AGADII S YQA V
Sbjct: 3 LLDGGNGTTLADDPGNELDTG-LWSATLLVKHPEKIARLHQSWEKAGADIITSCSYQATV 61
Query: 69 DN----LTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETA--- 121
L K ++EQ ++ S + EN T LN + L I A
Sbjct: 62 QGFENYLLKQTHTEQNDVE--------KPSKEADENATHLPRLNSPLDFLRSSIGVAHKS 113
Query: 122 -------ASIGPYGTVLRDGSEYSGHYVDSMTEAD-LIAWH------RPNVEALVRAGVD 167
S+GP+G L +Y+G Y + + L +H N EA R VD
Sbjct: 114 LSTAKVGLSLGPFGATLTPPQDYAGIYPSPYNQLEPLKNFHLDRLLDYANDEATWRK-VD 172
Query: 168 YLALETIPAEKEALALVK----LLREFPGQ-----------KAW-LSF-----SCKDDTH 206
+ ETIP EALA+ LL+ + K W LSF S + +
Sbjct: 173 MVIFETIPNLLEALAVRSAWSTLLQSLEDRYEKTECIKWWVKPWVLSFVFAGSSGQFASG 232
Query: 207 TSHGELISSAVTSCLLANPDQI-----QAIGVNCVRPSHVSTLV 245
S E++++A+ L + DQ+ A+GVNC + + +V
Sbjct: 233 ASPTEVLNAALG--LSKDLDQLSLPRPSAVGVNCTKLQFIDKIV 274
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 143/366 (39%), Gaps = 73/366 (19%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
LLDG + ++ ++D LWS+ L PE H+ + + + S TV
Sbjct: 3 LLDGGNGTTLADDPGNELDTG-LWSATLLVKHPEKIARLHQSWEKAGADIITSCSYQATV 61
Query: 327 -------LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISS-QTAA 378
L+ EAD A H P + + + + + S+S+ +
Sbjct: 62 QGFENYLLKQTHTEQNDVEKPSKEADENATHLPRLNSPLDFLRSSIGVAHKSLSTAKVGL 121
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEAD-LIAWH------RPNVEALVRAGVDYLALETIP 431
S+GP+G L +Y+G Y + + L +H N EA R VD + ETIP
Sbjct: 122 SLGPFGATLTPPQDYAGIYPSPYNQLEPLKNFHLDRLLDYANDEATWRK-VDMVIFETIP 180
Query: 432 AEKEALALVK----LLREFPGQ-----------KAW-LSF-----SCKDDTHTSHGELIS 470
EALA+ LL+ + K W LSF S + + S E+++
Sbjct: 181 NLLEALAVRSAWSTLLQSLEDRYEKTECIKWWVKPWVLSFVFAGSSGQFASGASPTEVLN 240
Query: 471 SAVTSCLLANPDQI-----QAIGVNCVRPSHVSTLVRCI-----KQSHPTVQT-----IV 515
+A+ L + DQ+ A+GVNC + + +V QS T+++ +
Sbjct: 241 AALG--LSKDLDQLSLPRPSAVGVNCTKLQFIDKIVSAWTDLTETQSLRTLESPAPWLWM 298
Query: 516 YPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNI------------IGGCCEVTSY 563
YP+ G V+D W + QW + +NI +GGCC+
Sbjct: 299 YPDGGLVYDVERRCWSGGQIGTD------QWARQLMNIAQQASLHWPGVVVGGCCKTGPT 352
Query: 564 EIQQMR 569
I+ ++
Sbjct: 353 HIRALK 358
>gi|323336516|gb|EGA77782.1| Mht1p [Saccharomyces cerevisiae Vin13]
Length = 185
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 82/175 (46%), Gaps = 9/175 (5%)
Query: 408 AWHRPNVEALVR-AGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG 466
A+ +P +E + +D + ETIP E A++ + + ++ S D++ G
Sbjct: 12 AFFKPQLENFNQNRDIDLIGFETIPNFHELKAILSWDEDIISKPFYIGLSVDDNSLLRDG 71
Query: 467 ---ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVW 523
E IS + + +GVNCV + + +++ + + P + +VYPN G ++
Sbjct: 72 TTLEEISVHIKGLGNKINKNLLLMGVNCVSFNQSALILKMLHEHLPGMPLLVYPNSGEIY 131
Query: 524 DSVHMKW---LDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEF 575
+ W + D++ V ++++ G IIGGCC + +I ++ +D++
Sbjct: 132 NPKEKTWHRPTNKLDDWET--TVKKFVDNGARIIGGCCRTSPKDIAEIASAVDKY 184
>gi|254452055|ref|ZP_05065492.1| homocysteine S-methyltransferase [Octadecabacter arcticus 238]
gi|198266461|gb|EDY90731.1| homocysteine S-methyltransferase [Octadecabacter arcticus 238]
Length = 292
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 129/321 (40%), Gaps = 61/321 (19%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG ++ H D PLWS+ + P HRDF A +
Sbjct: 4 ITLLDGGMGQELV-HRAGDRP-TPLWSTRVMLDHPGMVAGVHRDFAAAGATIATT----- 56
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
+ Y+ H+ D +T L EAL R LA K S + + A SIGP
Sbjct: 57 ------NTYAIHH-DRLTGTGL----EEQFEALHRMA---LAEAKESGAMRIAGSIGPL- 101
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
+ + D M D V L+ A VD + ET+ + A +++
Sbjct: 102 --------VASYRADVMPPYDFAVPKFEEVARLIGADVDLILCETVVSIDHARSILA--- 150
Query: 445 EFPGQKA-----WLSFSC--KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
G KA W++FS +D T GE ++ A++ +A +A+ VNC P +
Sbjct: 151 ---GAKAAEKPIWIAFSVSDRDGTLLRSGEPLTDALSVVGIA-----EAVLVNCSAPEAI 202
Query: 498 ST----LVRCIK------QSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWL 547
L C K T+ +K V D++ M+ T D Y+ + +W+
Sbjct: 203 PAALDILATCGKPYGAYANGFETITEGFLKDKSTV-DALAMRRDFTPDLYA--DHAMRWV 259
Query: 548 EEGVNIIGGCCEVTSYEIQQM 568
+ G IIGGCCEV+ I ++
Sbjct: 260 DHGATIIGGCCEVSPAHIAEI 280
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 101/245 (41%), Gaps = 50/245 (20%)
Query: 4 ICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+ ++ LLDG ++ H D PLWS+ + P HRDF AGA I ++
Sbjct: 1 MTQITLLDGGMGQELV-HRAGDRP-TPLWSTRVMLDHPGMVAGVHRDFAAAGATIATTNT 58
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
Y + D LT G EQ + LH+ M A+ KE +G + A S
Sbjct: 59 YAIHHDRLTGTGLEEQ--FEALHR----MALAEAKE---------------SGAMRIAGS 97
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
IGP + + D M D V L+ A VD + ET+ + A ++
Sbjct: 98 IGPL---------VASYRADVMPPYDFAVPKFEEVARLIGADVDLILCETVVSIDHARSI 148
Query: 184 VKLLREFPGQKA-----WLSFSC--KDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 236
+ G KA W++FS +D T GE ++ A++ +A +A+ VNC
Sbjct: 149 LA------GAKAAEKPIWIAFSVSDRDGTLLRSGEPLTDALSVVGIA-----EAVLVNCS 197
Query: 237 RPSHV 241
P +
Sbjct: 198 APEAI 202
>gi|428207238|ref|YP_007091591.1| methionine synthase [Chroococcidiopsis thermalis PCC 7203]
gi|428009159|gb|AFY87722.1| methionine synthase (B12-dependent) [Chroococcidiopsis thermalis
PCC 7203]
Length = 1178
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 131/324 (40%), Gaps = 46/324 (14%)
Query: 261 PNKGVKLLDGSFTSQVSRH--TIKDVDGHPLWS-SVYLT-TEPEACVETHRDFIRGHIET 316
P + V + DG+ + + T +D G + YL T PEA + HRDF +
Sbjct: 12 PERPVIVFDGAMGTNLQSQNLTAEDFGGSQYEGCNEYLVHTNPEAVAKVHRDFFAAGADV 71
Query: 317 AAS--IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISS 374
+ G VL + Y + T A+L R ++ KP
Sbjct: 72 VETDTFGGTSIVLAEYDLADKAYYLNKTAAELAK----------RVAAEFSTPEKPRF-- 119
Query: 375 QTAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYLALET---I 430
A S+GP GT L GH D+M A + EAL GVD +ET +
Sbjct: 120 -VAGSMGP-GTKLPT----LGHIDFDTMKTA-----YVEQAEALYDGGVDLFIVETCQDV 168
Query: 431 PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGE-LISSAVTSCL-LANPDQIQAIG 488
K AL ++ + G++ L S T S G L+ + + + L + P +I +G
Sbjct: 169 LQIKAALNAIEEVFAKKGERRPLMVSV---TMESMGTMLVGTEINAALTILEPYKIDILG 225
Query: 489 VNCVR-PSHVSTLVRCIKQSHPTVQTIVYPNKG---GVWDSVHMKWLDTEDEYSILHYVP 544
+NC P + ++ + + P + + + PN G V H + TE ++H+V
Sbjct: 226 LNCATGPDLMKPHIKYLSEHSPFIVSCI-PNAGLPENVGGQAHYRLTPTELRMHLMHFVE 284
Query: 545 QWLEEGVNIIGGCCEVTSYEIQQM 568
GV +IGGCC IQQ+
Sbjct: 285 DL---GVQVIGGCCGTRPAHIQQL 305
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 34/234 (14%)
Query: 39 TEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK 98
T PEA + HRDF AGAD++++ + L + Y + L+K+ +
Sbjct: 52 TNPEAVAKVHRDFFAAGADVVETDTFGGTSIVLAE--YDLADKAYYLNKTAAELAKRVAA 109
Query: 99 ENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPN 157
E TP+ F A S+GP GT L GH D+M A +
Sbjct: 110 EFSTPE---KPRF--------VAGSMGP-GTKLPT----LGHIDFDTMKTA-----YVEQ 148
Query: 158 VEALVRAGVDYLALET---IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGE-LI 213
EAL GVD +ET + K AL ++ + G++ L S T S G L+
Sbjct: 149 AEALYDGGVDLFIVETCQDVLQIKAALNAIEEVFAKKGERRPLMVSV---TMESMGTMLV 205
Query: 214 SSAVTSCL-LANPDQIQAIGVNCVR-PSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
+ + + L + P +I +G+NC P + ++ + + P + + + PN G+
Sbjct: 206 GTEINAALTILEPYKIDILGLNCATGPDLMKPHIKYLSEHSPFIVSCI-PNAGL 258
>gi|268317980|ref|YP_003291699.1| methionine synthase [Rhodothermus marinus DSM 4252]
gi|262335514|gb|ACY49311.1| methionine synthase [Rhodothermus marinus DSM 4252]
Length = 1236
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 118/282 (41%), Gaps = 40/282 (14%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD---------GHPLWSS--VYLTTEPEACVETHRDFIRA 54
++ +LDG+ + + RH + + D HPL + + + T+PE + HR ++ A
Sbjct: 14 RILILDGAMGTLIQRHRLAEEDFRGARFADHPHPLRGNNDLLVLTQPELIRDIHRAYLEA 73
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK-ENQTPDINLNKTFNL 113
GAD+I+++ + AN + G E +L + +L D+ + P+ F
Sbjct: 74 GADLIETNTFNANAISQADYGL-EHLVYELNVAAARLAREVADEYTRRAPE---RPRF-- 127
Query: 114 LTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 173
A +IGP L + + ++T +++A +R V L+ GVD L +ET
Sbjct: 128 ------VAGAIGPTNKTLSISPDVNNPAYRAVTFDEMVAVYREQVRGLLDGGVDVLLVET 181
Query: 174 IPAEKE-ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL---LANPDQIQ 229
+ AL + EF + + G +S +A+ +
Sbjct: 182 VFDTLNCKAALFAIQEEFHVRGRAVPVMVSGTIVDQSGRTLSGQTPEAFWISIAHMPHLL 241
Query: 230 AIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
++G+NC +RP + L R TV T +YPN G+
Sbjct: 242 SVGLNCALGSGQMRP-FIEELARVA-----TVFTSLYPNAGL 277
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 136/353 (38%), Gaps = 70/353 (19%)
Query: 251 SHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD---------GHPLWSS--VYLTTEP 299
+HP + + + + +LDG+ + + RH + + D HPL + + + T+P
Sbjct: 4 THPLARLL---QERILILDGAMGTLIQRHRLAEEDFRGARFADHPHPLRGNNDLLVLTQP 60
Query: 300 EACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWH---RPNVEA 356
E RD R ++E A D E + +++++AD H NV A
Sbjct: 61 ELI----RDIHRAYLEAGA----------DLIETNTFNANAISQADYGLEHLVYELNVAA 106
Query: 357 --LVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNV 414
L R D P A +IGP L + + ++T +++A +R V
Sbjct: 107 ARLAREVADEYTRRAPERPRFVAGAIGPTNKTLSISPDVNNPAYRAVTFDEMVAVYREQV 166
Query: 415 EALVRAGVDYLALETIPAEKE-ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAV 473
L+ GVD L +ET+ AL + EF + + G +S
Sbjct: 167 RGLLDGGVDVLLVETVFDTLNCKAALFAIQEEFHVRGRAVPVMVSGTIVDQSGRTLSGQT 226
Query: 474 TSCL---LANPDQIQAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWD 524
+A+ + ++G+NC +RP + L R TV T +YPN G
Sbjct: 227 PEAFWISIAHMPHLLSVGLNCALGSGQMRP-FIEELARVA-----TVFTSLYPNAG---- 276
Query: 525 SVHMKWLDTEDEYSILHYVPQWL--------EEG-VNIIGGCCEVTSYEIQQM 568
DE +P+++ EG +N+ GGCC T I+ +
Sbjct: 277 --------LPDELGQYREMPEYMAAQLADYAREGWLNLAGGCCGTTPEHIRAI 321
>gi|329848162|ref|ZP_08263190.1| methionine synthase [Asticcacaulis biprosthecum C19]
gi|328843225|gb|EGF92794.1| methionine synthase [Asticcacaulis biprosthecum C19]
Length = 359
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 26/225 (11%)
Query: 357 LVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA 416
+ R D +P A SIGP +L S+ + +T + +R V+A
Sbjct: 118 IARKVADEWTAKEPHKPRFVAGSIGPLNKMLSMSSDVNDPGARLVTFDQVYQAYREQVQA 177
Query: 417 LVRAGVDYLALETIPAEKEALALVKLLREF--PGQKA---WLSFSCKDDT-HTSHGELIS 470
L GVD +ETI A +K + + GQ+ W+S + D + T G+
Sbjct: 178 LYEGGVDLYLIETITDTLNCKAAIKAILDLEDEGQETLPIWISGTITDRSGRTLSGQTAE 237
Query: 471 SAVTSCLLANPDQIQ---AIGVNCVRPSHVSTLVR---CIKQSHPTVQTIVYPNKGGVWD 524
+ S A P + A+G + +RP H++ L R C+ ++P PN G +D
Sbjct: 238 AFWNSVRHAKPFAVGFNCALGADLMRP-HIAELARVADCLVAAYPNAG---LPNAMGQYD 293
Query: 525 SVHMKWLDTEDEYSILHYVPQWLEEG-VNIIGGCCEVTSYEIQQM 568
E + H + +W ++G VNI+GGCC T IQ +
Sbjct: 294 ---------EQPHETAHELHEWAKDGIVNILGGCCGTTPDHIQHV 329
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 113/294 (38%), Gaps = 44/294 (14%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD--GHPLWS---------SVYLTTEPEACVETHRDFIRA 54
++ +LDGS+ + R + + D G + + T P+ + H + A
Sbjct: 22 RILILDGSWGVMIQRRGLDESDFRGERFAAHDGQLKGNNDILCITRPDVIADLHHQYFAA 81
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKD----KENQTPDINLNKT 110
GADI +++ + A S Q+ +D+ + ++ D KE P
Sbjct: 82 GADISETNTFSATTIAQDDYRLSLQDCIDINLEGARIARKVADEWTAKEPHKPRF----- 136
Query: 111 FNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 170
A SIGP +L S+ + +T + +R V+AL GVD
Sbjct: 137 ---------VAGSIGPLNKMLSMSSDVNDPGARLVTFDQVYQAYREQVQALYEGGVDLYL 187
Query: 171 LETIPAEKEALALVKLLREF--PGQKA---WLSFSCKDDT-HTSHGELISSAVTSCLLAN 224
+ETI A +K + + GQ+ W+S + D + T G+ + S A
Sbjct: 188 IETITDTLNCKAAIKAILDLEDEGQETLPIWISGTITDRSGRTLSGQTAEAFWNSVRHAK 247
Query: 225 PDQIQ---AIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQ 275
P + A+G + +RP H++ L R YPN G+ G + Q
Sbjct: 248 PFAVGFNCALGADLMRP-HIAELARVAD-----CLVAAYPNAGLPNAMGQYDEQ 295
>gi|159037921|ref|YP_001537174.1| methionine synthase [Salinispora arenicola CNS-205]
gi|157916756|gb|ABV98183.1| methionine synthase [Salinispora arenicola CNS-205]
Length = 1171
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 120/283 (42%), Gaps = 48/283 (16%)
Query: 6 KVKLLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
++ + DG+ + + + T+ D DG + + T P+A H ++ GAD ++++
Sbjct: 12 RILVADGAMGTMLHAADLTLDDFDGLEGCNEILNVTRPDAVRSVHEAYLAVGADCVETNT 71
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
+ AN+ NL + G E +L +L +A D TP+ F L S
Sbjct: 72 FGANLPNLAEYGI-EGRIRELSEAGARLARTAADA-YATPE---QPRFVL--------GS 118
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET---------- 173
IGP GT L GH + A L +R N L+ G D L +ET
Sbjct: 119 IGP-GTKL----PTLGH----ASYASLRDAYRENAAGLIAGGSDALIIETCQDLLQVKAA 169
Query: 174 IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA-NPDQIQAIG 232
+ K A+A +L R P C T+ L+ S + + L A P I IG
Sbjct: 170 VIGSKRAMA--ELGRTVP-------IICHVAVETTGTMLLGSEIGAALAAIEPLGIDLIG 220
Query: 233 VNC-VRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLL--DGSF 272
+NC P+ + +R + Q H + V PN G+ +L DG++
Sbjct: 221 LNCSTGPAEMGEHLRYLSQ-HSRIPVSVMPNAGLPVLTSDGAY 262
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 122/315 (38%), Gaps = 53/315 (16%)
Query: 280 TIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYS-GHYV 338
T+ D DG + + T P+A H ++ + + +G L + +EY +
Sbjct: 30 TLDDFDGLEGCNEILNVTRPDAVRSVHEAYLAVGADCVET-NTFGANLPNLAEYGIEGRI 88
Query: 339 DSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYV 398
++EA L R D A P SIGP GT L GH
Sbjct: 89 RELSEAG---------ARLARTAAD--AYATPEQPRFVLGSIGP-GTKL----PTLGH-- 130
Query: 399 DSMTEADLIAWHRPNVEALVRAGVDYLALET----------IPAEKEALALVKLLREFPG 448
+ A L +R N L+ G D L +ET + K A+A +L R P
Sbjct: 131 --ASYASLRDAYRENAAGLIAGGSDALIIETCQDLLQVKAAVIGSKRAMA--ELGRTVP- 185
Query: 449 QKAWLSFSCKDDTHTSHGELISSAVTSCLLA-NPDQIQAIGVNC-VRPSHVSTLVRCIKQ 506
C T+ L+ S + + L A P I IG+NC P+ + +R + Q
Sbjct: 186 ------IICHVAVETTGTMLLGSEIGAALAAIEPLGIDLIGLNCSTGPAEMGEHLRYLSQ 239
Query: 507 SHPTVQTIVYPNKG-GVWDSVHMKWLDTEDEYS--ILHYVPQWLEEGVNIIGGCCEVTSY 563
H + V PN G V S + T DE + + +V + GV ++GGCC T
Sbjct: 240 -HSRIPVSVMPNAGLPVLTSDGAYFPLTPDEMADALERFVTDY---GVALVGGCCGSTP- 294
Query: 564 EIQQMRIMIDEFNTK 578
+ +R++ + +
Sbjct: 295 --EHIRVLAERLRGR 307
>gi|194337470|ref|YP_002019264.1| B12-dependent methionine synthase [Pelodictyon phaeoclathratiforme
BU-1]
gi|194309947|gb|ACF44647.1| methionine synthase [Pelodictyon phaeoclathratiforme BU-1]
Length = 1240
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 117/286 (40%), Gaps = 48/286 (16%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD---------GHPLWSS--VYLTTEPEACVETHRDFIRA 54
++ +LDG+ + + RH +K+ D HPL + + + T P+ H DF+ A
Sbjct: 12 RILVLDGAMGTMIQRHKLKEADYRGTRFANHSHPLIGNNDILVLTRPDIIYALHCDFLEA 71
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKE--NQTPDINLNKTFN 112
G+DII+++ + AN +++ YS + + L+ + E + PD F
Sbjct: 72 GSDIIETNTFNAN--PISQADYSASDLVKELNVEAARLARRAADEYTARNPD---KPRF- 125
Query: 113 LLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE 172
A SIGP L + + ++T +++ + +E L+ GVD L +E
Sbjct: 126 -------VAGSIGPTNKTLSLSPDVNNPGFRAVTFQEVVDNYTLQLEGLMEGGVDLLLVE 178
Query: 173 TIPAEKEALALVKLLREFPGQKA-WLSFSCKDDTHTSHGELISSAVTSCL---LANPDQI 228
T+ A + + EF + + + G +S T +A+ +
Sbjct: 179 TVFDTLNCKAALFSIEEFFNRTGVRIPVMVSGTVVDASGRTLSGQTTEAFWISIAHMPDL 238
Query: 229 QAIGVNCVRPSHVSTLVRCIKQSHPTVQTI---------VYPNKGV 265
+IG+NC S KQ P ++ + VYPN G+
Sbjct: 239 LSIGLNCALGS---------KQMRPFIEALAGIAESYVSVYPNAGL 275
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 126/341 (36%), Gaps = 49/341 (14%)
Query: 265 VKLLDGSFTSQVSRHTIKDVD---------GHPLWSS--VYLTTEPEACVETHRDFIRGH 313
+ +LDG+ + + RH +K+ D HPL + + + T P+ H DF+
Sbjct: 13 ILVLDGAMGTMIQRHKLKEADYRGTRFANHSHPLIGNNDILVLTRPDIIYALHCDFLEA- 71
Query: 314 IETAASIGPYGTVLRDGSEYSGHYVDSM--TEADLIAWHRPNVEALVRAGVDYLALIKPS 371
G+ + + + ++ + + + +DL+ L R D P
Sbjct: 72 ----------GSDIIETNTFNANPISQADYSASDLVKELNVEAARLARRAADEYTARNPD 121
Query: 372 ISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP 431
A SIGP L + + ++T +++ + +E L+ GVD L +ET+
Sbjct: 122 KPRFVAGSIGPTNKTLSLSPDVNNPGFRAVTFQEVVDNYTLQLEGLMEGGVDLLLVETVF 181
Query: 432 AEKEALALVKLLREFPGQKA-WLSFSCKDDTHTSHGELISSAVTSCL---LANPDQIQAI 487
A + + EF + + + G +S T +A+ + +I
Sbjct: 182 DTLNCKAALFSIEEFFNRTGVRIPVMVSGTVVDASGRTLSGQTTEAFWISIAHMPDLLSI 241
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTI---------VYPNKGGVWDSVHMKWLDTEDEYS 538
G+NC S KQ P ++ + VYPN G D EY
Sbjct: 242 GLNCALGS---------KQMRPFIEALAGIAESYVSVYPNAG---LPNEFGEYDDSPEYM 289
Query: 539 ILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEFNTKK 579
VNI+GGCC T I+ + +++ ++
Sbjct: 290 AGQIAGFATSGFVNIVGGCCGTTPQHIKAIAEAVEKLQPRR 330
>gi|323345809|gb|EGA80175.1| Sam4p [Saccharomyces cerevisiae Lalvin QA23]
Length = 304
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 108/274 (39%), Gaps = 36/274 (13%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP----------EACVETHRDFIRAG 55
KV +LDG +++ IK +P+WS++ +E + E DF+ AG
Sbjct: 16 KVLVLDGGQGTELENRGIKV--ANPVWSTIPFISESFWSDESSANRKIVKEMFNDFLNAG 73
Query: 56 ADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLT 115
A+I+ ++ YQ + ++ SE + L + L+N D N +
Sbjct: 74 AEILMTTTYQTSYKSV-----SENTPIRTLSEYNNLLNRIVDFSR-----------NCIG 117
Query: 116 GHIETAASIGPYGT-VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALET 173
IGP+G + R E++G Y D + +P +E + +D + ET
Sbjct: 118 EDKYLIGCIGPWGAHICR---EFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFET 174
Query: 174 IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQA 230
IP E A++ + ++ S + G E I+ +
Sbjct: 175 IPNIHELKAILSWDESILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINPNFSF 234
Query: 231 IGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+G+NCV + ++ + Q+ P + + YPN G
Sbjct: 235 LGINCVSFNQSPDILESLHQALPNMALLAYPNSG 268
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 9/182 (4%)
Query: 380 IGPYGT-VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEAL 437
IGP+G + R E++G Y D + +P +E + +D + ETIP E
Sbjct: 126 IGPWGAHICR---EFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFETIPNIHELK 182
Query: 438 ALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIGVNCVRP 494
A++ + ++ S + G E I+ + +G+NCV
Sbjct: 183 AILSWDESILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINPNFSFLGINCVSF 242
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNI 553
+ ++ + Q+ P + + YPN G V+D+ WL D+ S V Q++ G I
Sbjct: 243 NQSPDILESLHQALPNMALLAYPNSGEVYDTEKKIWLPNSDKLNSWDTVVKQYISSGARI 302
Query: 554 IG 555
IG
Sbjct: 303 IG 304
>gi|434393512|ref|YP_007128459.1| methionine synthase (B12-dependent) [Gloeocapsa sp. PCC 7428]
gi|428265353|gb|AFZ31299.1| methionine synthase (B12-dependent) [Gloeocapsa sp. PCC 7428]
Length = 1206
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 138/331 (41%), Gaps = 44/331 (13%)
Query: 253 PTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD-GHPLWSSV--YLT-TEPEACVETHRD 308
P + + P + V + DG+ + + + D G + YL T+PEA + HRD
Sbjct: 4 PFLTRLHSPERPVIVFDGAMGTNLQTQNLTAADFGGAQYEGCNEYLVHTKPEAVTKVHRD 63
Query: 309 FIRGH---IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL 365
F+ IET + G VL +EY D +A + ++ E + ++
Sbjct: 64 FLAAGADVIETD-TFGAASIVL---AEY-----DLADQAYYL--NKKAAELAKQVAAEFS 112
Query: 366 ALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL 425
KP A S+GP + G ++D T L A E L GVD
Sbjct: 113 TPEKPRF---VAGSMGPTTKLPTLG------HIDFDT---LQAAFAEQAEGLYDGGVDLF 160
Query: 426 ALET---IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-LANP 481
+ET + K AL V+ + G++ L S +T + L+ S +++ L + P
Sbjct: 161 IIETCQDVLQIKAALNAVESVFRRKGERRPLMVSVTMETTGTM--LVGSDISAALTILEP 218
Query: 482 DQIQAIGVNCVR-PSHVSTLVRCIKQSHPTVQTIVYPNKG---GVWDSVHMKWLDTEDEY 537
I +G+NC P ++ V+ + Q P V + + PN G V H + E
Sbjct: 219 YPIDILGLNCATGPDRMAEHVKYLSQHSPFVVSCI-PNAGLPENVGGQAHYRLTPMELRM 277
Query: 538 SILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+++H+V GV +IGGCC IQQ+
Sbjct: 278 ALMHFVEDL---GVQVIGGCCGTRPDHIQQL 305
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 30/232 (12%)
Query: 39 TEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDK 98
T+PEA + HRDF+ AGAD+I++ + A L + ++Q A L K+ +L
Sbjct: 52 TKPEAVTKVHRDFLAAGADVIETDTFGAASIVLAEYDLADQ-AYYLNKKAAELAKQVA-A 109
Query: 99 ENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNV 158
E TP+ F A S+GP + G ++D T L A
Sbjct: 110 EFSTPE---KPRF--------VAGSMGPTTKLPTLG------HIDFDT---LQAAFAEQA 149
Query: 159 EALVRAGVDYLALET---IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISS 215
E L GVD +ET + K AL V+ + G++ L S +T + L+ S
Sbjct: 150 EGLYDGGVDLFIIETCQDVLQIKAALNAVESVFRRKGERRPLMVSVTMETTGTM--LVGS 207
Query: 216 AVTSCL-LANPDQIQAIGVNCVR-PSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
+++ L + P I +G+NC P ++ V+ + Q P V + + PN G+
Sbjct: 208 DISAALTILEPYPIDILGLNCATGPDRMAEHVKYLSQHSPFVVSCI-PNAGL 258
>gi|406707538|ref|YP_006757890.1| Homocysteine S-methyltransferase [alpha proteobacterium HIMB59]
gi|406653314|gb|AFS48713.1| Homocysteine S-methyltransferase [alpha proteobacterium HIMB59]
Length = 357
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 33/203 (16%)
Query: 41 PEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKEN 100
P+ + HR+FIRAG+D++Q+ Y + + L +G +++ L+ L K+ + AKD N
Sbjct: 42 PDVVTQLHREFIRAGSDVVQAFTYYGHREKLRLIG--KEDLLEPLQKNA--LKIAKDAAN 97
Query: 101 QTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA 160
+ P+++L ++ G + P S V+ M E + IAW +
Sbjct: 98 EFPELDL-----MIAGDVANTNIYDP-------SDSKSIVEVERMYE-EQIAWAK----- 139
Query: 161 LVRAGVDYLALETIPAEKEALALVKLLREFPGQKAW--LSFSCKDDTHTSHGELISSAVT 218
AGVD++ ETI EAL +K ++E G A L+ D T +H +
Sbjct: 140 --EAGVDFVIAETIQWTGEALIALKKIKE-AGLIAVVNLAIPANDLTRDNH-----TPED 191
Query: 219 SCLLANPDQIQAIGVNCVR-PSH 240
+C + + + +G+NC R P H
Sbjct: 192 ACKIFEDNGAEVVGLNCFRGPVH 214
>gi|127511644|ref|YP_001092841.1| B12-dependent methionine synthase [Shewanella loihica PV-4]
gi|126636939|gb|ABO22582.1| methionine synthase (B12-dependent) [Shewanella loihica PV-4]
Length = 1240
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 147/356 (41%), Gaps = 57/356 (16%)
Query: 245 VRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD--GHPL--W-------SSV 293
VR ++Q + ++ + NK + +LDG+ + + H +++ D G W + +
Sbjct: 7 VRNVRQINDAIRARL--NKEILILDGAMGTMIQNHKLEEADFRGERFKQWPCDLKGNNDL 64
Query: 294 YLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRP- 352
+ T+PE + HRD++ G + + + ++ V +M + ++ R
Sbjct: 65 LVLTQPELIKQIHRDYLLA-----------GADIIETNTFNATQV-AMADYEMQELSREI 112
Query: 353 NVEA--LVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWH 410
N+E L R D +A + A +GP + + ++ DL+ +
Sbjct: 113 NLEGARLARTACDEVAA-ESGRQCYVAGVLGPTNRTCSISPDVNDPGYRNIHFDDLVEAY 171
Query: 411 RPNVEALVRAGVDYLALETI---PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGE 467
+ +AL+ G D + +ETI K AL ++ L + GQ+ L + G
Sbjct: 172 IESTQALIEGGADIIMVETIFDTLNAKAALFAIETLFDQLGQR--LPVMISGTITDASGR 229
Query: 468 LISSAVTSCLLANPDQIQ--AIGVNC------VRP--SHVSTLVRCIKQSHPTVQTIVYP 517
++ T + ++ +IG+NC +RP +S + C +HP P
Sbjct: 230 TLTGQTTEAFYNSLRHVKPLSIGLNCALGPQELRPYVEELSKIAECYVSAHPNAG---LP 286
Query: 518 NKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGV-NIIGGCCEVTSYEIQQMRIMI 572
N+ G +D E + + W EEG+ NIIGGCC T I+ +R +
Sbjct: 287 NEFGGYD---------ETPEQMAEVIGPWAEEGLLNIIGGCCGTTPDHIKAIRAAV 333
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 115/283 (40%), Gaps = 58/283 (20%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD--GHPL--W-------SSVYLTTEPEACVETHRDFIRA 54
++ +LDG+ + + H +++ D G W + + + T+PE + HRD++ A
Sbjct: 24 EILILDGAMGTMIQNHKLEEADFRGERFKQWPCDLKGNNDLLVLTQPELIKQIHRDYLLA 83
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLL 114
GADII+++ + N T++ ++ E +L + +INL
Sbjct: 84 GADIIETNTF-----NATQVAMADYEMQEL-----------------SREINLEGARLAR 121
Query: 115 TGHIETAAS----------IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 164
T E AA +GP + + ++ DL+ + + +AL+
Sbjct: 122 TACDEVAAESGRQCYVAGVLGPTNRTCSISPDVNDPGYRNIHFDDLVEAYIESTQALIEG 181
Query: 165 GVDYLALETI---PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL 221
G D + +ETI K AL ++ L + GQ+ L + G ++ T
Sbjct: 182 GADIIMVETIFDTLNAKAALFAIETLFDQLGQR--LPVMISGTITDASGRTLTGQTTEAF 239
Query: 222 LANPDQIQ--AIGVNC------VRP--SHVSTLVRCIKQSHPT 254
+ ++ +IG+NC +RP +S + C +HP
Sbjct: 240 YNSLRHVKPLSIGLNCALGPQELRPYVEELSKIAECYVSAHPN 282
>gi|426255570|ref|XP_004021421.1| PREDICTED: methionine synthase [Ovis aries]
Length = 1265
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 146/366 (39%), Gaps = 61/366 (16%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD---------GHPLWSS--VYLTTEPEACVETHRDFIRA 54
++ +LDG + + RH + + D PL + + T+P + H+D++ A
Sbjct: 29 RIMVLDGGMGTMIQRHKLSEEDFRGQEFKDHARPLKGNNDILSITQPNVIYQIHKDYLLA 88
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQL-MNSAKDKENQTPDINLNKTFNL 113
GADII+++ + + G L H + ++ M SA ++ L
Sbjct: 89 GADIIETNTFSSTAIAQADYG--------LEHLAYRMNMCSAGVARKAAEEVTLQTGIKR 140
Query: 114 LTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 173
A ++GP L ++T +L+ ++ + L+ GVD L +ET
Sbjct: 141 Y-----VAGALGPTNKTLSVSPSVERPDYRNITFDELVEAYKEQAKGLLDGGVDILLIET 195
Query: 174 I----PAEKEALALVKLL-REFPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQ 227
I A+ A+ KL E+ + ++S + D + T G+ + V S A+P
Sbjct: 196 IFDTANAKAALFAVQKLFEEEYVPRPVFISGTIVDKSGRTLSGQTGEAFVISVSHADP-- 253
Query: 228 IQAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSF--TSQVSRH 279
IG+NC +RP + T+ +C T + YPN G+ G + T Q+
Sbjct: 254 -LCIGLNCALGAAEMRP-FIETIGKCT-----TAYVLCYPNAGLPNTFGDYDETPQMMAM 306
Query: 280 TIKD--VDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHY 337
+KD VDG L C T D IR E + P + S + GH
Sbjct: 307 HVKDFAVDG--------LVNIVGGCCGTTPDHIREIAEAVKNCKPR---VPPASVFEGHM 355
Query: 338 VDSMTE 343
+ S E
Sbjct: 356 LLSGLE 361
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 136/337 (40%), Gaps = 65/337 (19%)
Query: 265 VKLLDGSFTSQVSRHTIKDVD---------GHPLWSS--VYLTTEPEACVETHRDFIRGH 313
+ +LDG + + RH + + D PL + + T+P + H+D++
Sbjct: 30 IMVLDGGMGTMIQRHKLSEEDFRGQEFKDHARPLKGNNDILSITQPNVIYQIHKDYLLA- 88
Query: 314 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL----IK 369
G + + + +S ++ +AD H + AGV A ++
Sbjct: 89 ----------GADIIETNTFSST---AIAQADYGLEHLAYRMNMCSAGVARKAAEEVTLQ 135
Query: 370 PSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 429
I A ++GP L ++T +L+ ++ + L+ GVD L +ET
Sbjct: 136 TGIKRYVAGALGPTNKTLSVSPSVERPDYRNITFDELVEAYKEQAKGLLDGGVDILLIET 195
Query: 430 I----PAEKEALALVKLLRE-FPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQ 483
I A+ A+ KL E + + ++S + D + T G+ + V S A+P
Sbjct: 196 IFDTANAKAALFAVQKLFEEEYVPRPVFISGTIVDKSGRTLSGQTGEAFVISVSHADP-- 253
Query: 484 IQAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKG-----GVWDSVHMKWLD 532
IG+NC +RP + T+ +C T + YPN G G +D
Sbjct: 254 -LCIGLNCALGAAEMRP-FIETIGKCT-----TAYVLCYPNAGLPNTFGDYD-------- 298
Query: 533 TEDEYSILHYVPQWLEEG-VNIIGGCCEVTSYEIQQM 568
E + +V + +G VNI+GGCC T I+++
Sbjct: 299 -ETPQMMAMHVKDFAVDGLVNIVGGCCGTTPDHIREI 334
>gi|345798817|ref|XP_536332.3| PREDICTED: methionine synthase [Canis lupus familiaris]
Length = 1363
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 130/309 (42%), Gaps = 50/309 (16%)
Query: 6 KVKLLDGSFTSQVSRHTI--KDVDGHPLW---------SSVYLTTEPEACVETHRDFIRA 54
++ +LDG + + RH + +D GH + + T+P + H+D++ A
Sbjct: 127 RIMVLDGGMGTMIQRHKLSEEDFRGHEFQDHARSLKGNNDILSITQPNVIYQIHKDYLLA 186
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMN-SAKDKENQTPDINLNKTFNL 113
GADII+++ + + N+ + Y L H + Q+ SA +++
Sbjct: 187 GADIIETNTFSST--NVAQADYG------LEHLAYQMNKCSAGVARKAAEEVSFQTGIKR 238
Query: 114 LTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 173
A ++GP L ++T +L+ ++ + L+ GVD L +ET
Sbjct: 239 F-----VAGALGPTNKTLSVSPSVEKPDYRNITFDELVEAYKEQAKGLLDGGVDILLIET 293
Query: 174 I----PAEKEALALVKLL-REFPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQ 227
I A+ AL L E+ + ++S + D + T G+ + V S A+P
Sbjct: 294 IFDTANAKAALFALQTLFEEEYSPRPIFISGTIIDKSGRTLSGQTGEAFVISVSHASP-- 351
Query: 228 IQAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSF--TSQVSRH 279
IG+NC +RP + T+ +C T + YPN G+ G + T Q+
Sbjct: 352 -LCIGLNCALGAAEMRP-FIETIGKCT-----TAYVLCYPNAGLPNTFGDYDETPQMMAM 404
Query: 280 TIKD--VDG 286
+KD +DG
Sbjct: 405 QLKDFAMDG 413
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 132/338 (39%), Gaps = 67/338 (19%)
Query: 265 VKLLDGSFTSQVSRHTI--KDVDGHPLW---------SSVYLTTEPEACVETHRDFIRGH 313
+ +LDG + + RH + +D GH + + T+P + H+D++
Sbjct: 128 IMVLDGGMGTMIQRHKLSEEDFRGHEFQDHARSLKGNNDILSITQPNVIYQIHKDYLLA- 186
Query: 314 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL----IK 369
G + + + +S V +AD H AGV A +
Sbjct: 187 ----------GADIIETNTFSSTNV---AQADYGLEHLAYQMNKCSAGVARKAAEEVSFQ 233
Query: 370 PSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 429
I A ++GP L ++T +L+ ++ + L+ GVD L +ET
Sbjct: 234 TGIKRFVAGALGPTNKTLSVSPSVEKPDYRNITFDELVEAYKEQAKGLLDGGVDILLIET 293
Query: 430 I----PAEKEALALVKLLRE-FPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQ 483
I A+ AL L E + + ++S + D + T G+ + V S A+P
Sbjct: 294 IFDTANAKAALFALQTLFEEEYSPRPIFISGTIIDKSGRTLSGQTGEAFVISVSHASP-- 351
Query: 484 IQAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKG-----GVWDSV-HMKWL 531
IG+NC +RP + T+ +C T + YPN G G +D M +
Sbjct: 352 -LCIGLNCALGAAEMRP-FIETIGKCT-----TAYVLCYPNAGLPNTFGDYDETPQMMAM 404
Query: 532 DTEDEYSILHYVPQWLEEG-VNIIGGCCEVTSYEIQQM 568
+D + +G VNI+GGCC + I+++
Sbjct: 405 QLKD----------FAMDGLVNIVGGCCGTSPDHIREI 432
>gi|206900823|ref|YP_002251589.1| 5-methyltetrahydrofolate-homocysteine methyltransferase
[Dictyoglomus thermophilum H-6-12]
gi|206739926|gb|ACI18984.1| 5-methyltetrahydrofolate-homocysteine methyltransferase
[Dictyoglomus thermophilum H-6-12]
Length = 289
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 139/327 (42%), Gaps = 48/327 (14%)
Query: 262 NKGVKL-----LDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIET 316
N+ +KL DG+ +++ R + G P V P E HRD+I+
Sbjct: 2 NRKIKLPEFLFFDGAMGTELQRRGLPP--GTP--PEVLNLENPTLVEEVHRDYIKA---- 53
Query: 317 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT 376
G+++ + + + G+ + + A L ++ + GV+ +A
Sbjct: 54 -------GSMVIETNTFGGNRI-RLKRAGLDG----KIKEINEKGVE-IAKKASEGKVLI 100
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A S+GP G ++ + S + + +E LV++GVD + +ET+ + EA
Sbjct: 101 AGSVGPLGELIEPYGDISEEEAEEV--------FTEQIEILVKSGVDLILIETMISLNEA 152
Query: 437 LALVKLLREF--PGQKAWLSFS-CKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR 493
L +K ++F P +SF + T G+ + ++ + D +G NC R
Sbjct: 153 LIALKSAKKFDIP-VGVTMSFEWTERGGRTPFGDEVEYSIKTLEENGAD---FVGANCGR 208
Query: 494 PSHVSTLVRCIKQSHPTVQTIVYPNKG-GVWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552
+ I + T+ ++ PN G W++ + + +T D++ I +V + L+ +N
Sbjct: 209 GFEDMIKIAPIIRKATTLPVLIQPNAGIPQWENGKLTYPETPDKFKI--FVEEMLKLNIN 266
Query: 553 IIGGCCEVTSYEIQQMRIMIDEFNTKK 579
IGGCC T I+ + EF K+
Sbjct: 267 FIGGCCGTTPNHIEVFK----EFYLKR 289
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 111/266 (41%), Gaps = 38/266 (14%)
Query: 3 KICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSS 62
K+ + DG+ +++ R + G P V P E HRD+I+AG+ +I+++
Sbjct: 6 KLPEFLFFDGAMGTELQRRGLPP--GTP--PEVLNLENPTLVEEVHRDYIKAGSMVIETN 61
Query: 63 CYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAA 122
+ N L + G + + ++ K V++ A + G + A
Sbjct: 62 TFGGNRIRLKRAGL-DGKIKEINEKGVEIAKKASE------------------GKVLIAG 102
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
S+GP G ++ + S + + +E LV++GVD + +ET+ + EAL
Sbjct: 103 SVGPLGELIEPYGDISEEEAEEV--------FTEQIEILVKSGVDLILIETMISLNEALI 154
Query: 183 LVKLLREF--PGQKAWLSFS-CKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 239
+K ++F P +SF + T G+ + ++ + D +G NC R
Sbjct: 155 ALKSAKKFDIP-VGVTMSFEWTERGGRTPFGDEVEYSIKTLEENGAD---FVGANCGRGF 210
Query: 240 HVSTLVRCIKQSHPTVQTIVYPNKGV 265
+ I + T+ ++ PN G+
Sbjct: 211 EDMIKIAPIIRKATTLPVLIQPNAGI 236
>gi|151946030|gb|EDN64262.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|323332214|gb|EGA73625.1| Sam4p [Saccharomyces cerevisiae AWRI796]
gi|323334896|gb|EGA76238.1| Sam4p [Saccharomyces cerevisiae Vin13]
Length = 112
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-S 538
NP+ +G+NCV + ++ + Q+ P + + YPN G V+D+ WL D+ S
Sbjct: 16 NPN-FSFLGINCVSFNQSPDILESLHQALPNMALLAYPNSGEVYDTEKKIWLPNSDKLNS 74
Query: 539 ILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEF 575
V Q++ G IIGGCC + +IQ++ + ++
Sbjct: 75 WDTVVKQYISSGARIIGGCCRTSPKDIQEISAAVKKY 111
>gi|323352909|gb|EGA85210.1| Sam4p [Saccharomyces cerevisiae VL3]
Length = 140
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-S 538
NP+ +G+NCV + ++ + Q+ P + + YPN G V+D+ WL D+ S
Sbjct: 44 NPN-FSFLGINCVSFNQSPDILESLHQALPNMALLAYPNSGEVYDTEKKIWLPNSDKLNS 102
Query: 539 ILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEF 575
V Q++ G IIGGCC + +IQ++ + ++
Sbjct: 103 WDTVVKQYISSGARIIGGCCRTSPKDIQEISAAVKKY 139
>gi|366166922|ref|ZP_09466677.1| methionine synthase (B12-dependent) [Acetivibrio cellulolyticus
CD2]
Length = 805
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 136/326 (41%), Gaps = 47/326 (14%)
Query: 255 VQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHI 314
+Q + Y + + +LDG+ +++ + + W+ PE V RD+I+
Sbjct: 4 IQFLDYLKENIMVLDGATGTELQKRGMPKGTCPEKWA----IENPEVIVNVQRDYIK--- 56
Query: 315 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGV-DYLALIKPSIS 373
A S Y + G+ + L G+ D I ++
Sbjct: 57 --AGSNAVYTCT------FGGNRIK-----------------LAEFGLGDQTVEINTKLA 91
Query: 374 SQTAASIGPYGTVLRDGSEYSGHYV---DSMTEADLIAWHRPNVEALVRAGVDYLALETI 430
++G G V+ D + +G +V M + + ++ V+ L+ GVD+ +ET+
Sbjct: 92 RLAREAVGDNGFVVGDLAP-TGRFVRPFGDMPFEECVEAYKEQVKGLLEGGVDFFVIETM 150
Query: 431 PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490
+EA A + ++E +S + ++ T G + +T+ + A+G N
Sbjct: 151 MDIQEARAALLAVKESCDLPVCVSMTFDENGQTLTG---TDPITALITLQSLGADAVGCN 207
Query: 491 C-VRPSHVSTLVRCIKQSHPTVQTIVYPNKG--GVWDSVHMKWLDTEDEYSILHYVPQWL 547
C P + +++ +K + V + PN G + D + + E EY YV ++L
Sbjct: 208 CSTGPKDMIKIIKAMK-PYAKVPLLAKPNAGLPKLIDGKTVFDMGPE-EYG--TYVEEFL 263
Query: 548 EEGVNIIGGCCEVTSYEIQQMRIMID 573
GVN++GGCC + I+Q+R I+
Sbjct: 264 NSGVNLLGGCCGTSPLYIEQIRKNIN 289
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 113/269 (42%), Gaps = 43/269 (15%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ +LDG+ +++ + + W+ PE V RD+I+AG++ + + +
Sbjct: 14 IMVLDGATGTELQKRGMPKGTCPEKWA----IENPEVIVNVQRDYIKAGSNAVYTCTFGG 69
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
N L + G +Q +++ K +L A +G
Sbjct: 70 NRIKLAEFGLGDQ-TVEINTKLARLAREA----------------------------VGD 100
Query: 127 YGTVLRDGSEYSGHYV---DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
G V+ D + +G +V M + + ++ V+ L+ GVD+ +ET+ +EA A
Sbjct: 101 NGFVVGDLAP-TGRFVRPFGDMPFEECVEAYKEQVKGLLEGGVDFFVIETMMDIQEARAA 159
Query: 184 VKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVS 242
+ ++E +S + ++ T G + +T+ + A+G NC P +
Sbjct: 160 LLAVKESCDLPVCVSMTFDENGQTLTG---TDPITALITLQSLGADAVGCNCSTGPKDMI 216
Query: 243 TLVRCIKQSHPTVQTIVYPNKGV-KLLDG 270
+++ +K + V + PN G+ KL+DG
Sbjct: 217 KIIKAMK-PYAKVPLLAKPNAGLPKLIDG 244
>gi|424867073|ref|ZP_18290886.1| 5-methyltetrahydrofolate--homocysteine methyltransferase
[Leptospirillum sp. Group II 'C75']
gi|124515722|gb|EAY57231.1| 5-methyltetrahydrofolate--homocysteine methyltransferase
[Leptospirillum rubarum]
gi|387222413|gb|EIJ76862.1| 5-methyltetrahydrofolate--homocysteine methyltransferase
[Leptospirillum sp. Group II 'C75']
Length = 815
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 24/203 (11%)
Query: 377 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA 436
A IGP GT + + + D D I L+ AGVD +A+ET+ +E
Sbjct: 103 AGDIGPSGTTI---APFGDLPFD-----DAIGIFYEQARILLEAGVDLIAIETMFDIQEM 154
Query: 437 LALVKLLREFPGQK----AWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC- 491
A + +RE G + A ++F+ +D T G S T+ + ++ +G+NC
Sbjct: 155 RAALIGVREAVGNRIPVMALMTFN--NDGITDSG---SDPETAASVLEGFGVEILGLNCS 209
Query: 492 VRPSHVSTLVRCIKQSHPTVQTIVYPNKG-GVWDSVHMKW-LDTEDEYSILHYVPQWLEE 549
V P + +VR + Q+ T V PN G V H + + ED + + PQ++E
Sbjct: 210 VGPEAMVPVVRRLGQTTSTF-IAVEPNAGLPVHRDGHTVYPANAED---VARFAPQFVEA 265
Query: 550 GVNIIGGCCEVTSYEIQQMRIMI 572
G NIIGGCC T ++ + M+
Sbjct: 266 GANIIGGCCGTTPEYVRLLSRML 288
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 108/268 (40%), Gaps = 48/268 (17%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
++ LLDGS + + + LW+ P+ + H +++ AG+DII ++ +
Sbjct: 11 EILLLDGSMGALLQSRGLPPGYAPDLWN----LERPQDIQQVHSEYVEAGSDIILTNTF- 65
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDIN---LNKTFNLLTGHIETAA 122
S +L D E Q +IN + G A
Sbjct: 66 ---------------------GSSRLRLREYDAEGQIREINEAGVEMARRASRGKAYVAG 104
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
IGP GT + + + D D I L+ AGVD +A+ET+ +E A
Sbjct: 105 DIGPSGTTI---APFGDLPFD-----DAIGIFYEQARILLEAGVDLIAIETMFDIQEMRA 156
Query: 183 LVKLLREFPGQK----AWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VR 237
+ +RE G + A ++F+ +D T G S T+ + ++ +G+NC V
Sbjct: 157 ALIGVREAVGNRIPVMALMTFN--NDGITDSG---SDPETAASVLEGFGVEILGLNCSVG 211
Query: 238 PSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
P + +VR + Q+ T V PN G+
Sbjct: 212 PEAMVPVVRRLGQTTSTF-IAVEPNAGL 238
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,388,650,992
Number of Sequences: 23463169
Number of extensions: 386901219
Number of successful extensions: 1005459
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 2766
Number of HSP's that attempted gapping in prelim test: 988127
Number of HSP's gapped (non-prelim): 9920
length of query: 581
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 433
effective length of database: 8,886,646,355
effective search space: 3847917871715
effective search space used: 3847917871715
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)