BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15811
(581 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O31463|HMT_BACSU Homocysteine S-methyltransferase YbgG OS=Bacillus subtilis (strain
168) GN=ybgG PE=4 SV=1
Length = 315
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 145/256 (56%), Gaps = 13/256 (5%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG+ +++ R D LWS+ L EPE + H D+ AGAD ++ YQ+
Sbjct: 15 VLDGAMATELERKGCNLNDS--LWSAKILMEEPELIKQVHTDYFAAGADCAITASYQSTF 72
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G SE EA L+ SV + A+D+ + LN+ ++ AASIGPYG
Sbjct: 73 EGFAARGLSEAEARRLIELSVSIAAEARDEFWSLEENRLNRPKPII------AASIGPYG 126
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEY G+Y +++E +LI +HRP ++AL+ AG D LA ETIP EA A+V+LL+
Sbjct: 127 AYLADGSEYRGNY--AISEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLK 184
Query: 189 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 248
EFP AW+SFS KD H S G +A + L QI A+G+NC H+ +L+ +
Sbjct: 185 EFPETYAWISFSAKDGLHISDG--TPAADCASWLDEHRQIAALGINCTPLQHIPSLIEEL 242
Query: 249 KQSHPTVQTIVYPNKG 264
K+ + + IVYPN G
Sbjct: 243 KK-NTSKPIIVYPNSG 257
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 154/305 (50%), Gaps = 17/305 (5%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG+ +++ R D LWS+ L EPE + H D+ + A + T
Sbjct: 15 VLDGAMATELERKGCNLNDS--LWSAKILMEEPELIKQVHTDYFAAGADCAITASYQST- 71
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQT---AASIGPY 383
+ G ++EA+ +V A ++ +L + ++ AASIGPY
Sbjct: 72 ------FEGFAARGLSEAEARRLIELSVSIAAEARDEFWSLEENRLNRPKPIIAASIGPY 125
Query: 384 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
G L DGSEY G+Y +++E +LI +HRP ++AL+ AG D LA ETIP EA A+V+LL
Sbjct: 126 GAYLADGSEYRGNY--AISEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLL 183
Query: 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 503
+EFP AW+SFS KD H S G +A + L QI A+G+NC H+ +L+
Sbjct: 184 KEFPETYAWISFSAKDGLHISDG--TPAADCASWLDEHRQIAALGINCTPLQHIPSLIEE 241
Query: 504 IKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSY 563
+K+ + + IVYPN G +D W S W E+G +IGGCC
Sbjct: 242 LKK-NTSKPIIVYPNSGEQYDPETKTWNGAACAESYGASARTWHEKGARLIGGCCRTKPE 300
Query: 564 EIQQM 568
IQ++
Sbjct: 301 NIQEI 305
>sp|Q9SDL7|HMT1_ARATH Homocysteine S-methyltransferase 1 OS=Arabidopsis thaliana GN=HMT-1
PE=1 SV=1
Length = 326
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 138/260 (53%), Gaps = 16/260 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG F +Q+ H D PLWS+V L PE H +++ AGADI+ +S YQA +
Sbjct: 22 VVDGGFATQLEIHGAAIND--PLWSAVSLIKNPELIKRVHMEYLEAGADIVVTSSYQATI 79
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G S +E+ LL KSV+L A+D+ + ++N AASIG YG
Sbjct: 80 PGFLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVSGHSYN----RALVAASIGSYG 135
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEYSGHY ++++ L +HR ++ LV AG D LA ETIP + EA A V+LL
Sbjct: 136 AYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLE 195
Query: 189 EFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCL--LANPDQIQAIGVNCVRPSHVSTLV 245
E Q AW+ F+ D GE + CL L + I A+G+NC P + L+
Sbjct: 196 EEKVQIPAWICFTSVDGEKAPSGE----SFEECLEPLNKSNNIYAVGINCAPPQFIENLI 251
Query: 246 RCIKQSHPTVQTI-VYPNKG 264
R K + T + I VYPN G
Sbjct: 252 R--KFAKLTKKAIVVYPNSG 269
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 160/335 (47%), Gaps = 32/335 (9%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+++ ++ ++ G ++DG F +Q+ H D PLWS+V L PE H
Sbjct: 3 LEKKSALLEDLIKKCGGCAVVDGGFATQLEIHGAAIND--PLWSAVSLIKNPELIKRVHM 60
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
+++ + + T+ G ++ + + + +VE V A +
Sbjct: 61 EYLEAGADIVVTSSYQATI-------PGFLSRGLSIEESESLLQKSVELAVEARDRFWEK 113
Query: 368 IKPSISSQT------AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG 421
+ +S + AASIG YG L DGSEYSGHY ++++ L +HR ++ LV AG
Sbjct: 114 VS-KVSGHSYNRALVAASIGSYGAYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAG 172
Query: 422 VDYLALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCL--L 478
D LA ETIP + EA A V+LL E Q AW+ F+ D GE + CL L
Sbjct: 173 PDLLAFETIPNKLEAQACVELLEEEKVQIPAWICFTSVDGEKAPSGE----SFEECLEPL 228
Query: 479 ANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTI-VYPNKGGVWDSVHMKWLDTE--- 534
+ I A+G+NC P + L+R K + T + I VYPN G VWD +WL ++
Sbjct: 229 NKSNNIYAVGINCAPPQFIENLIR--KFAKLTKKAIVVYPNSGEVWDGKAKQWLPSQCFG 286
Query: 535 -DEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
DE+ + + +W + G +IGGCC T I +
Sbjct: 287 DDEFEM--FATKWRDLGAKLIGGCCRTTPSTINAI 319
>sp|Q47690|MMUM_ECOLI Homocysteine S-methyltransferase OS=Escherichia coli (strain K12)
GN=mmuM PE=1 SV=2
Length = 310
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 148/306 (48%), Gaps = 15/306 (4%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
+ LLDG+ +++ D LWS+ L PE E H D+ R + A +
Sbjct: 16 ILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQA 73
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
T +G + EA A +VE +A YLA + + A S+GPYG
Sbjct: 74 TP-------AGFAARGLDEAQSKALIGKSVELARKAREAYLAENPQAGTLLVAGSVGPYG 126
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
L DGSEY G Y S+ A+HRP VEAL+ AG D LA ET+P E AL +LL
Sbjct: 127 AYLADGSEYRGDYHCSVEA--FQAFHRPRVEALLDAGADLLACETLPNFSEIEALAELLT 184
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 504
+P +AW SF+ +D H S G + V LLA Q+ A+G+NC+ + + ++ +
Sbjct: 185 AYPRARAWFSFTLRDSEHLSDGTPLRDVVA--LLAGYPQVVALGINCIALENTTAALQHL 242
Query: 505 KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQWLEEGVNIIGGCCEVTSY 563
+ +VYPN G +D+V W + + L Y+PQW G +IGGCC T
Sbjct: 243 -HGLTVLPLVVYPNSGEHYDAVSKTWHHHGEHCAQLADYLPQWQAAGARLIGGCCRTTPA 301
Query: 564 EIQQMR 569
+I ++
Sbjct: 302 DIAALK 307
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 128/258 (49%), Gaps = 16/258 (6%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ D LWS+ L PE E H D+ RAGA ++ YQA
Sbjct: 16 ILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQA 73
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
G E ++ L+ KSV+L A++ N G + A S+GP
Sbjct: 74 TPAGFAARGLDEAQSKALIGKSVELARKAREA---------YLAENPQAGTLLVAGSVGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKL 186
YG L DGSEY G Y S+ A+HRP VEAL+ AG D LA ET+P E AL +L
Sbjct: 125 YGAYLADGSEYRGDYHCSVEA--FQAFHRPRVEALLDAGADLLACETLPNFSEIEALAEL 182
Query: 187 LREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
L +P +AW SF+ +D H S G + V LLA Q+ A+G+NC+ + + ++
Sbjct: 183 LTAYPRARAWFSFTLRDSEHLSDGTPLRDVVA--LLAGYPQVVALGINCIALENTTAALQ 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
+ + +VYPN G
Sbjct: 241 HL-HGLTVLPLVVYPNSG 257
>sp|Q9M1W4|HMT2_ARATH Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana GN=HMT-2
PE=1 SV=1
Length = 333
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 137/263 (52%), Gaps = 17/263 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG ++ RH D PLWS+ L T P H D++ AGADII S+ YQA +
Sbjct: 21 VIDGGLATEFERHGADLND--PLWSAKCLVTSPHLIHTVHLDYLEAGADIISSASYQATI 78
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH-IETAASIGPY 127
G+S +E+ LL KSV++ A++ + + +L I AAS+G Y
Sbjct: 79 QGFEAKGFSREESESLLKKSVEIATEARNSYYDKCGTSSSMDDKILKKRPILVAASVGSY 138
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187
G L DGSEYSG Y DS+T L +HR ++ L +G D +A ETIP + EA A LL
Sbjct: 139 GAYLADGSEYSGIYGDSITLEKLKDFHRRRLQVLAESGADLIAFETIPNKIEAQAFADLL 198
Query: 188 RE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
E PG W SF+ KD + G+ I ++ + N +++ A+G+NC P +
Sbjct: 199 EEGDVKIPG---WFSFNSKDGVNVVSGDSIKECIS--IAENCEKVVAVGINCTPPRFIEG 253
Query: 244 LVRCIKQ--SHPTVQTIVYPNKG 264
LV I++ S P +VYPN G
Sbjct: 254 LVLEIEKVTSKP---ILVYPNSG 273
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 159/337 (47%), Gaps = 35/337 (10%)
Query: 250 QSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDF 309
S +++ + G ++DG ++ RH D PLWS+ L T P H D+
Sbjct: 4 NSFNSMKDFLKQTGGYAVIDGGLATEFERHGADLND--PLWSAKCLVTSPHLIHTVHLDY 61
Query: 310 IRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIK 369
+ + +S T+ G E G S E++ + + +VE A Y
Sbjct: 62 LEAGADIISSASYQATI--QGFEAKGF---SREESESLL--KKSVEIATEARNSYYDKCG 114
Query: 370 PSISSQ----------TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR 419
S S AAS+G YG L DGSEYSG Y DS+T L +HR ++ L
Sbjct: 115 TSSSMDDKILKKRPILVAASVGSYGAYLADGSEYSGIYGDSITLEKLKDFHRRRLQVLAE 174
Query: 420 AGVDYLALETIPAEKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTS 475
+G D +A ETIP + EA A LL E PG W SF+ KD + G+ I ++
Sbjct: 175 SGADLIAFETIPNKIEAQAFADLLEEGDVKIPG---WFSFNSKDGVNVVSGDSIKECIS- 230
Query: 476 CLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDT 533
+ N +++ A+G+NC P + LV I++ S P +VYPN G +D+ +W++
Sbjct: 231 -IAENCEKVVAVGINCTPPRFIEGLVLEIEKVTSKP---ILVYPNSGESYDADRKEWVEN 286
Query: 534 E--DEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+ + YV +W++ GV+++GGCC T I+ +
Sbjct: 287 TGVGDEDFVSYVEKWMDAGVSLLGGCCRTTPTTIRAI 323
>sp|Q8LAX0|HMT3_ARATH Homocysteine S-methyltransferase 3 OS=Arabidopsis thaliana GN=HMT3
PE=1 SV=2
Length = 347
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 163/336 (48%), Gaps = 46/336 (13%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDF-------------- 309
G ++DG F +++ RH D++ PLWS+ L T P + H D+
Sbjct: 22 GYAVVDGGFATELQRHG-ADIN-DPLWSAKCLITSPHLVTKVHLDYLESGANIIITASYQ 79
Query: 310 --IRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
I+G + S+G +LR V+ EA I ++R + D+
Sbjct: 80 ATIQGFVAKGLSVGEAENLLR-------RSVEITYEAREIFYNR-----CTKGSWDFAYA 127
Query: 368 IKPSISS-QTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 426
K S AAS+G YG L DGSEYSG Y DS+++ L +HR V+ L ++G D +A
Sbjct: 128 GKASRRPILVAASVGSYGAYLADGSEYSGIYGDSVSKETLKDFHRRRVQILAKSGADLIA 187
Query: 427 LETIPAEKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP- 481
ETIP + EA A LL E P AW SF+ KD G+ S V +A+
Sbjct: 188 FETIPNKLEAEAYADLLEEEDIDIP---AWFSFTSKDGVSVPRGD---SVVECAKVADSC 241
Query: 482 DQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDT--EDEYSI 539
+ AIG+NC P ++ L+ ++Q +VYPN G V+D ++ KW+ + E E
Sbjct: 242 KNVVAIGINCTAPRYIHALIISLRQ-MTRKPIVVYPNSGEVYDGLNKKWIKSEGESEEDF 300
Query: 540 LHYVPQWLEEGVNIIGGCCEVTSYEIQQM-RIMIDE 574
+ YV +W + G ++ GGCC T I+ + +++ DE
Sbjct: 301 VSYVSKWRDAGASLFGGCCRTTPNTIRAIAKVLSDE 336
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 146/278 (52%), Gaps = 18/278 (6%)
Query: 1 MSKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQ 60
+ K ++DG F +++ RH D++ PLWS+ L T P + H D++ +GA+II
Sbjct: 17 LEKCGGYAVVDGGFATELQRHG-ADIN-DPLWSAKCLITSPHLVTKVHLDYLESGANIII 74
Query: 61 SSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKD-KENQTPDINLNKTFNLLTGH-- 117
++ YQA + G S EA +LL +SV++ A++ N+ + + +
Sbjct: 75 TASYQATIQGFVAKGLSVGEAENLLRRSVEITYEAREIFYNRCTKGSWDFAYAGKASRRP 134
Query: 118 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 177
I AAS+G YG L DGSEYSG Y DS+++ L +HR V+ L ++G D +A ETIP +
Sbjct: 135 ILVAASVGSYGAYLADGSEYSGIYGDSVSKETLKDFHRRRVQILAKSGADLIAFETIPNK 194
Query: 178 KEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIG 232
EA A LL E P AW SF+ KD G+ S V +A+ + AIG
Sbjct: 195 LEAEAYADLLEEEDIDIP---AWFSFTSKDGVSVPRGD---SVVECAKVADSCKNVVAIG 248
Query: 233 VNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDG 270
+NC P ++ L+ ++Q +VYPN G ++ DG
Sbjct: 249 INCTAPRYIHALIISLRQ-MTRKPIVVYPNSG-EVYDG 284
>sp|A4ZGQ8|HMT1_BRAOT Homocysteine S-methyltransferase 1 OS=Brassica oleracea var.
italica GN=HMT1 PE=1 SV=1
Length = 326
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/285 (36%), Positives = 146/285 (51%), Gaps = 25/285 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG F +Q+ H D PLWS+V L +PE H +++ AGAD++ +S YQA +
Sbjct: 22 VVDGGFATQLEIHGAAIND--PLWSAVSLIKDPELIKRVHMEYLEAGADVVVTSSYQATI 79
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKD----KENQTPDINLNKTFNLLTGHIETAASI 124
G S +E+ LL KSV+L A+D K ++T + N+ AASI
Sbjct: 80 PGFLSRGLSMEESESLLQKSVKLAVEARDRFWDKVSKTSGHSYNRAL--------VAASI 131
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
G YG L DGSEYSG Y + ++ L +HR ++ LV A D LA ETIP + EA A V
Sbjct: 132 GSYGAYLADGSEYSGSYGEDVSLDKLKDFHRRRIQVLVEASPDLLAFETIPNKLEAQACV 191
Query: 185 KLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCL--LANPDQIQAIGVNCVRPSHV 241
+LL E Q AW+ F+ D + GE + CL L + I A+G+NC P +
Sbjct: 192 ELLEEENVQIPAWICFTSVDGENAPSGE----SFQECLETLNKSNNICAVGINCAPPQFM 247
Query: 242 STLVRCIKQSHPTVQTI-VYPNKGVKLLDGSFTSQVSRHTIKDVD 285
L+R K S T + I VYPN G ++ DG + D +
Sbjct: 248 DNLIR--KFSKLTQKAIVVYPNSG-EVWDGKAKKWLPSQCFGDAE 289
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 156/332 (46%), Gaps = 26/332 (7%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+++ ++ ++ G ++DG F +Q+ H D PLWS+V L +PE H
Sbjct: 3 LEKKSALLEDLIEKCGGCAVVDGGFATQLEIHGAAIND--PLWSAVSLIKDPELIKRVHM 60
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
+++ + + T+ G ++ + + + +V+ V A +
Sbjct: 61 EYLEAGADVVVTSSYQATI-------PGFLSRGLSMEESESLLQKSVKLAVEARDRFWDK 113
Query: 368 IKPSIS-----SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGV 422
+ + + AASIG YG L DGSEYSG Y + ++ L +HR ++ LV A
Sbjct: 114 VSKTSGHSYNRALVAASIGSYGAYLADGSEYSGSYGEDVSLDKLKDFHRRRIQVLVEASP 173
Query: 423 DYLALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCL--LA 479
D LA ETIP + EA A V+LL E Q AW+ F+ D + GE + CL L
Sbjct: 174 DLLAFETIPNKLEAQACVELLEEENVQIPAWICFTSVDGENAPSGE----SFQECLETLN 229
Query: 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTI-VYPNKGGVWDSVHMKWLDTE--DE 536
+ I A+G+NC P + L+R K S T + I VYPN G VWD KWL ++ +
Sbjct: 230 KSNNICAVGINCAPPQFMDNLIR--KFSKLTQKAIVVYPNSGEVWDGKAKKWLPSQCFGD 287
Query: 537 YSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+ +W + G +IGGCC T I+ +
Sbjct: 288 AEFEMFATKWRDLGAKLIGGCCRTTPSTIKAI 319
>sp|Q9FUN0|HMT1_MAIZE Homocysteine S-methyltransferase 1 OS=Zea mays GN=HMT-1 PE=2 SV=1
Length = 323
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 131/257 (50%), Gaps = 10/257 (3%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG F +Q+ D++ PLWS+ L T P E H ++ AGAD+I SS YQA +
Sbjct: 16 VIDGGFATQLEALG-ADIN-DPLWSAACLITRPHLVKEVHMQYLEAGADVIISSSYQATI 73
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G S EA DLL SV+L N A+D+ ++ +N AASIG YG
Sbjct: 74 PGFIARGMSVAEAEDLLRTSVKLANEARDEFWKSTLRKSKPIYN----RALVAASIGSYG 129
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEYSG Y +T L +HR ++ L AG D +A E IP + EA ALV+LL
Sbjct: 130 AYLADGSEYSGSYGADITAEKLKDFHRRRLQVLASAGPDLIAFEAIPNQMEAQALVELLE 189
Query: 189 EFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
E Q +W+ FS D + GE + + +L +++ +GVNC P + ++ C
Sbjct: 190 EEKVQIPSWICFSSVDGKNLCSGESFADCLK--ILNASEKVAVVGVNCTPPQFIEGII-C 246
Query: 248 IKQSHPTVQTIVYPNKG 264
+ VYPN G
Sbjct: 247 EFRKQTKKAIAVYPNSG 263
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 148/323 (45%), Gaps = 20/323 (6%)
Query: 254 TVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH 313
++ +V G ++DG F +Q+ D++ PLWS+ L T P E H ++
Sbjct: 3 VLEDLVARAGGCAVIDGGFATQLEALG-ADIN-DPLWSAACLITRPHLVKEVHMQYLEAG 60
Query: 314 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY----LALIK 369
+ S T+ G M+ A+ R +V+ A ++ L K
Sbjct: 61 ADVIISSSYQATI-------PGFIARGMSVAEAEDLLRTSVKLANEARDEFWKSTLRKSK 113
Query: 370 PSIS-SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE 428
P + + AASIG YG L DGSEYSG Y +T L +HR ++ L AG D +A E
Sbjct: 114 PIYNRALVAASIGSYGAYLADGSEYSGSYGADITAEKLKDFHRRRLQVLASAGPDLIAFE 173
Query: 429 TIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
IP + EA ALV+LL E Q +W+ FS D + GE + + +L +++ +
Sbjct: 174 AIPNQMEAQALVELLEEEKVQIPSWICFSSVDGKNLCSGESFADCLK--ILNASEKVAVV 231
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE--DEYSILHYVPQ 545
GVNC P + ++ C + VYPN G VWD +WL E S +
Sbjct: 232 GVNCTPPQFIEGII-CEFRKQTKKAIAVYPNSGEVWDGRAKRWLPVECLGHKSFDALAKR 290
Query: 546 WLEEGVNIIGGCCEVTSYEIQQM 568
W E G ++IGGCC T I+ +
Sbjct: 291 WQEAGASLIGGCCRTTPSTIRAV 313
>sp|Q4VNK0|SMTA_BRAOT Selenocysteine Se-methyltransferase OS=Brassica oleracea var.
italica GN=SMT PE=1 SV=1
Length = 346
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 133/262 (50%), Gaps = 17/262 (6%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG +++ RH D PLWS+ L T P H D++ AGADII S+ YQA +
Sbjct: 26 IIDGGLATELERHGADLND--PLWSAKCLLTSPHLIHTVHLDYLEAGADIISSASYQATI 83
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
GYS +++ LL KSV++ A+ + +K I AAS+G YG
Sbjct: 84 QGFEAKGYSIEKSESLLRKSVEIACEARSTYYDKCKDDDDKKILKKR-PILVAASVGSYG 142
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
L DGSEYSG Y D +T L +HR V+ L +G D +A ETIP + EA A +LL
Sbjct: 143 AFLADGSEYSGIYGDLITLETLKDFHRRRVQVLAESGADIIAFETIPNKLEAQAFAELLD 202
Query: 189 E----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
E PG W SF+ KD + G+ I + + +++ A+G+NC P + L
Sbjct: 203 EGVAKIPG---WFSFNSKDGVNVVSGDSIKECIA--IAEACEKVVAVGINCTPPRFIEGL 257
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
V I + S P +VYPN G
Sbjct: 258 VLEIAKVTSKP---ILVYPNSG 276
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 159/335 (47%), Gaps = 33/335 (9%)
Query: 250 QSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDF 309
++ +++ ++ G ++DG +++ RH D PLWS+ L T P H D+
Sbjct: 9 ETFYSMKELLKETGGYAIIDGGLATELERHGADLND--PLWSAKCLLTSPHLIHTVHLDY 66
Query: 310 IRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIK 369
+ + +S T+ G E G+ ++ +E+ L R +VE A Y K
Sbjct: 67 LEAGADIISSASYQATI--QGFEAKGYSIEK-SESLL----RKSVEIACEARSTYYDKCK 119
Query: 370 PSISSQ--------TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG 421
+ AAS+G YG L DGSEYSG Y D +T L +HR V+ L +G
Sbjct: 120 DDDDKKILKKRPILVAASVGSYGAFLADGSEYSGIYGDLITLETLKDFHRRRVQVLAESG 179
Query: 422 VDYLALETIPAEKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCL 477
D +A ETIP + EA A +LL E PG W SF+ KD + G+ I + +
Sbjct: 180 ADIIAFETIPNKLEAQAFAELLDEGVAKIPG---WFSFNSKDGVNVVSGDSIKECIA--I 234
Query: 478 LANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTE- 534
+++ A+G+NC P + LV I + S P +VYPN G +D +W++
Sbjct: 235 AEACEKVVAVGINCTPPRFIEGLVLEIAKVTSKP---ILVYPNSGERYDPERKEWVENTG 291
Query: 535 -DEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+ YV +W++ GV+++GGCC T I+ +
Sbjct: 292 VGNEDFVSYVEKWMDAGVSLLGGCCRTTPTTIRAI 326
>sp|Q9FUM7|HMT4_MAIZE Homocysteine S-methyltransferase 4 OS=Zea mays GN=HMT-4 PE=2 SV=1
Length = 342
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 134/262 (51%), Gaps = 20/262 (7%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG +++ H D LWS+ L + P + H D++ AGAD+I S+ YQA +
Sbjct: 26 VVDGGLGTELEAHGADLHDA--LWSAKCLASAPHLIRKVHLDYLEAGADVIISASYQATI 83
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
+ G+S E+ +LL +SV + A+ D + + AAS+G YG
Sbjct: 84 EGFQSRGFSRDESEELLRRSVHVAQEARRVFAAEGDRSSRRGRPPAL----VAASVGSYG 139
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 188
DGSEYSG Y SMT+ DL +HR ++ L AG D +A ETIP + EA +LL
Sbjct: 140 AYRADGSEYSGDYGKSMTKEDLKNFHRRRLQVLAGAGPDLIAFETIPNKLEAQVYAELLE 199
Query: 189 EFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 244
E + AW SF+ KD + + G+ I ++ SC ++ A+GVNC P + L
Sbjct: 200 ENGIRIPAWFSFTSKDGVNAASGDPINECAAVADSC-----PRVDAVGVNCTAPRFIHGL 254
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ IK+ S P V VYPN G
Sbjct: 255 ILSIKKVTSKPIV---VYPNSG 273
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 150/330 (45%), Gaps = 21/330 (6%)
Query: 254 TVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH 313
++ V G ++DG +++ H D LWS+ L + P + H D++
Sbjct: 13 ALRGFVREAGGCAVVDGGLGTELEAHGADLHDA--LWSAKCLASAPHLIRKVHLDYLEAG 70
Query: 314 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSIS 373
+ S T+ +G + G D E + H V A + +
Sbjct: 71 ADVIISASYQATI--EGFQSRGFSRDESEELLRRSVHVAQEARRVFAAEGDRSSRRGRPP 128
Query: 374 SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 433
+ AAS+G YG DGSEYSG Y SMT+ DL +HR ++ L AG D +A ETIP +
Sbjct: 129 ALVAASVGSYGAYRADGSEYSGDYGKSMTKEDLKNFHRRRLQVLAGAGPDLIAFETIPNK 188
Query: 434 KEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGV 489
EA +LL E + AW SF+ KD + + G+ I ++ SC ++ A+GV
Sbjct: 189 LEAQVYAELLEENGIRIPAWFSFTSKDGVNAASGDPINECAAVADSC-----PRVDAVGV 243
Query: 490 NCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYS---ILHYVP 544
NC P + L+ IK+ S P V VYPN G + + +W+D++ + V
Sbjct: 244 NCTAPRFIHGLILSIKKVTSKPIV---VYPNSGETYVAETNEWVDSDGATGTDDFVSRVG 300
Query: 545 QWLEEGVNIIGGCCEVTSYEIQQMRIMIDE 574
+W G +IGGCC + ++ + + E
Sbjct: 301 EWRRAGAALIGGCCRTSPATVRAIARAVRE 330
>sp|Q9FUM8|HMT3_MAIZE Homocysteine S-methyltransferase 3 OS=Zea mays GN=HMT-3 PE=2 SV=1
Length = 338
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 146/285 (51%), Gaps = 25/285 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +++ + D PLWS+ L + P + H D++ AGA+II ++ YQA +
Sbjct: 25 VLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATI 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK------ENQTPDINLNKTFNLLTGHIETAA 122
G+S++++ +LL KSVQ+ A++ E TP + I AA
Sbjct: 83 QGFESKGFSKEQSENLLTKSVQIALEAREMFLKEHLEKSTP----------IQHPILVAA 132
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
++G YG L DGSEYSG Y ++ T+ L +HR ++ L AG D +A ETIP + EA A
Sbjct: 133 ALGSYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQA 192
Query: 183 LVKLLREFP-GQKAWLSFSCKDDTHTSHGE-LISSAVTSCLLANPDQIQAIGVNCVRPSH 240
V+LL E +WLSF+ KD H G+ LI A + A ++ A+G+NC P
Sbjct: 193 YVELLEECNINIPSWLSFNSKDGVHVVSGDSLIECATIADKCA---KVGAVGINCTPPRF 249
Query: 241 VSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD 285
+ L+ I++ ++YPN G + DG V + D D
Sbjct: 250 IHGLILSIRKVTDK-PILIYPNSGER-YDGEKKEWVESTGVSDGD 292
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 155/319 (48%), Gaps = 20/319 (6%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G +LDG +++ + D PLWS+ L + P + H D++ +
Sbjct: 22 GRLVLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQ 79
Query: 324 GTVLRDGSEYSGHYVDS----MTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAAS 379
T+ G E G + +T++ IA E ++ ++ I+ I AA+
Sbjct: 80 ATI--QGFESKGFSKEQSENLLTKSVQIALEAR--EMFLKEHLEKSTPIQHPI--LVAAA 133
Query: 380 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 439
+G YG L DGSEYSG Y ++ T+ L +HR ++ L AG D +A ETIP + EA A
Sbjct: 134 LGSYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQAY 193
Query: 440 VKLLREFP-GQKAWLSFSCKDDTHTSHGE-LISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
V+LL E +WLSF+ KD H G+ LI A + A ++ A+G+NC P +
Sbjct: 194 VELLEECNINIPSWLSFNSKDGVHVVSGDSLIECATIADKCA---KVGAVGINCTPPRFI 250
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE--DEYSILHYVPQWLEEGVNIIG 555
L+ I++ ++YPN G +D +W+++ + + YV +W ++G +IG
Sbjct: 251 HGLILSIRKVTDK-PILIYPNSGERYDGEKKEWVESTGVSDGDFVSYVNEWCKDGAALIG 309
Query: 556 GCCEVTSYEIQQMRIMIDE 574
GCC T I+ + +++
Sbjct: 310 GCCRTTPNTIRAIHRTLNQ 328
>sp|P56707|SMTA_ASTBI Selenocysteine methyltransferase OS=Astragalus bisulcatus GN=SMTA
PE=1 SV=1
Length = 338
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 139/272 (51%), Gaps = 26/272 (9%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+ ++ G +++ RH D PLWS+ L + P + H D++ GADII ++ YQ
Sbjct: 15 RAAVIAGGLGTELQRHGADLND--PLWSAKCLLSCPHLIRQVHLDYLENGADIIITASYQ 72
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKD----KENQTPDINLNKTFNLLTGHIETA 121
A + G+S++E LL +SV++ A+D + ++ N + + L I A
Sbjct: 73 ATIQGFKAKGFSDEEGEALLRRSVEIAREARDLYYQRCAESSSDNGDDSRILKQRPILIA 132
Query: 122 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEAL 181
S+G YG L DGSE+SG+Y D++ L +HR V+ L +GVD LA E +P + EA
Sbjct: 133 GSVGSYGAYLADGSEFSGNYGDAIKSETLKDFHRRKVQILADSGVDLLAFEAVPNKLEAQ 192
Query: 182 ALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELI---SSAVTSCLLANPDQIQAIGVN 234
A LL E P AW +F+ KD + G+ I S SC D++ A+G+N
Sbjct: 193 AYADLLEEENIITP---AWFAFTSKDGNNVVSGDSIEECGSIAESC-----DKVVAVGIN 244
Query: 235 CVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKG 264
C P + L+ +K+ + P V +YPN G
Sbjct: 245 CTPPRFIHDLILLLKKVTAKPIV---IYPNSG 273
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 152/338 (44%), Gaps = 36/338 (10%)
Query: 251 SHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFI 310
S P + ++ ++ G +++ RH D PLWS+ L + P + H D++
Sbjct: 2 SSPLITDFLHQAGRAAVIAGGLGTELQRHGADLND--PLWSAKCLLSCPHLIRQVHLDYL 59
Query: 311 RGHIE---------TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG 361
+ T G +G V+ EA + + R E+ G
Sbjct: 60 ENGADIIITASYQATIQGFKAKGFSDEEGEALLRRSVEIAREARDLYYQR-CAESSSDNG 118
Query: 362 VDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG 421
D L + I A S+G YG L DGSE+SG+Y D++ L +HR V+ L +G
Sbjct: 119 DDSRILKQRPI--LIAGSVGSYGAYLADGSEFSGNYGDAIKSETLKDFHRRKVQILADSG 176
Query: 422 VDYLALETIPAEKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELI---SSAVT 474
VD LA E +P + EA A LL E P AW +F+ KD + G+ I S
Sbjct: 177 VDLLAFEAVPNKLEAQAYADLLEEENIITP---AWFAFTSKDGNNVVSGDSIEECGSIAE 233
Query: 475 SCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLD 532
SC D++ A+G+NC P + L+ +K+ + P V +YPN G +D++ +W
Sbjct: 234 SC-----DKVVAVGINCTPPRFIHDLILLLKKVTAKPIV---IYPNSGETYDAIRKEWGQ 285
Query: 533 TED--EYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+ + YV +W E G +++GGCC T I+ +
Sbjct: 286 NSGVTDEDFVSYVDKWCESGASLVGGCCRTTPDTIRGI 323
>sp|Q9FUM9|HMT2_MAIZE Homocysteine S-methyltransferase 2 OS=Zea mays GN=HMT-2 PE=2 SV=1
Length = 339
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 143/284 (50%), Gaps = 23/284 (8%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +++ + D PLWS+ L + P + H D++ AGA+II ++ YQA +
Sbjct: 25 VLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATI 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK------ENQTPDINLNKTFNLLTGHIETAA 122
G+S++++ +LL KSV++ A++ E TP + + AA
Sbjct: 83 QGFESKGFSKEQSENLLTKSVEIALEAREMFLKEHLEKSTP----------IQHPVLVAA 132
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
S+G YG L DGSEYSG Y ++ T+ L +HR ++ L AG D +A ETIP + EA A
Sbjct: 133 SLGSYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAEA 192
Query: 183 LVKLLREFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 241
V+LL E AW SF+ KD H G+ + T + ++ A+G+NC P +
Sbjct: 193 YVELLEECNINIPAWFSFNSKDGVHIVSGDSLIECTT--IADKCAKVGAVGINCTPPRFI 250
Query: 242 STLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVD 285
L+ I++ ++YPN G + DG V + D D
Sbjct: 251 HGLILSIRKVTDK-PILIYPNSGER-YDGEKKEWVESTGVSDGD 292
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 154/324 (47%), Gaps = 20/324 (6%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G +LDG +++ + D PLWS+ L + P + H D++ +
Sbjct: 22 GRLVLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQ 79
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL-IKPSISSQ----TAA 378
T+ G E G + +E L +VE + A +L ++ S Q AA
Sbjct: 80 ATI--QGFESKG-FSKEQSENLLTK----SVEIALEAREMFLKEHLEKSTPIQHPVLVAA 132
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 438
S+G YG L DGSEYSG Y ++ T+ L +HR ++ L AG D +A ETIP + EA A
Sbjct: 133 SLGSYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAEA 192
Query: 439 LVKLLREFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
V+LL E AW SF+ KD H G+ + T + ++ A+G+NC P +
Sbjct: 193 YVELLEECNINIPAWFSFNSKDGVHIVSGDSLIECTT--IADKCAKVGAVGINCTPPRFI 250
Query: 498 STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE--DEYSILHYVPQWLEEGVNIIG 555
L+ I++ ++YPN G +D +W+++ + + YV +W ++G +IG
Sbjct: 251 HGLILSIRKVTDK-PILIYPNSGERYDGEKKEWVESTGVSDGDFVSYVNEWCKDGAVLIG 309
Query: 556 GCCEVTSYEIQQMRIMIDEFNTKK 579
GCC T I+ + +++ K+
Sbjct: 310 GCCRTTPNTIRAIHRTLNKSPNKQ 333
>sp|Q08985|SAM4_YEAST Homocysteine S-methyltransferase 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SAM4 PE=1 SV=1
Length = 325
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 9/202 (4%)
Query: 380 IGPYGT-VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEAL 437
IGP+G + R E++G Y D + +P +E + +D + ETIP E
Sbjct: 126 IGPWGAHICR---EFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFETIPNIHELK 182
Query: 438 ALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIGVNCVRP 494
A++ + ++ S + G E I+ + +G+NCV
Sbjct: 183 AILSWDESILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINPNFSFLGINCVSF 242
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-SILHYVPQWLEEGVNI 553
+ ++ + Q+ P + + YPN G V+D+ WL D+ S V Q++ G I
Sbjct: 243 NQSPDILESLHQALPNMALLAYPNSGEVYDTEKKIWLPNSDKLNSWDTVVKQYISSGARI 302
Query: 554 IGGCCEVTSYEIQQMRIMIDEF 575
IGGCC + +IQ++ + ++
Sbjct: 303 IGGCCRTSPKDIQEISAAVKKY 324
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 108/274 (39%), Gaps = 36/274 (13%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP----------EACVETHRDFIRAG 55
KV +LDG +++ IK +P+WS++ +E + E DF+ AG
Sbjct: 16 KVLVLDGGQGTELENRGIKV--ANPVWSTIPFISESFWSDESSANRKIVKEMFNDFLNAG 73
Query: 56 ADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLT 115
A+I+ ++ YQ + ++ SE + L + L+N D N +
Sbjct: 74 AEILMTTTYQTSYKSV-----SENTPIRTLSEYNNLLNRIVDFSR-----------NCIG 117
Query: 116 GHIETAASIGPYGT-VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALET 173
IGP+G + R E++G Y D + +P +E + +D + ET
Sbjct: 118 EDKYLIGCIGPWGAHICR---EFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFET 174
Query: 174 IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQA 230
IP E A++ + ++ S + G E I+ +
Sbjct: 175 IPNIHELKAILSWDESILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINPNFSF 234
Query: 231 IGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+G+NCV + ++ + Q+ P + + YPN G
Sbjct: 235 LGINCVSFNQSPDILESLHQALPNMALLAYPNSG 268
>sp|Q12525|MHT1_YEAST Homocysteine S-methyltransferase 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MHT1 PE=1 SV=1
Length = 324
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 141/341 (41%), Gaps = 40/341 (11%)
Query: 253 PTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP---------EACV 303
P + IV V +LDG +++ I P+WS+ T+E +
Sbjct: 5 PIKELIVEHPGKVLILDGGQGTELENRGINI--NSPVWSAAPFTSESFWEPSSQERKVVE 62
Query: 304 ETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHY--VDSMTEADLIAWHRPNVEALVRAG 361
E +RDF+ +I Y ++ + T +A ++ ++ +V
Sbjct: 63 EMYRDFMIAGANILMTI-----------TYQANFQSISENTSIKTLAAYKRFLDKIVSFT 111
Query: 362 VDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-A 420
+++ + I SIGP+ + EY+G Y D + +P +E +
Sbjct: 112 REFIGEERYLI-----GSIGPWAAHV--SCEYTGDYGPHPENIDYYGFFKPQLENFNQNR 164
Query: 421 GVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCL 477
+D + ETIP E A++ + + ++ S D++ G E IS +
Sbjct: 165 DIDLIGFETIPNFHELKAILSWDEDIISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLG 224
Query: 478 LANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW---LDTE 534
+ +GVNCV + + +++ + + P + +VYPN G +++ W +
Sbjct: 225 NKINKNLLLMGVNCVSFNQSALILKMLHEHLPGMPLLVYPNSGEIYNPKEKTWHRPTNKL 284
Query: 535 DEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEF 575
D++ V ++++ G IIGGCC + +I ++ +D++
Sbjct: 285 DDWETT--VKKFVDNGARIIGGCCRTSPKDIAEIASAVDKY 323
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 115/272 (42%), Gaps = 33/272 (12%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP---------EACVETHRDFIRAGA 56
KV +LDG +++ I P+WS+ T+E + E +RDF+ AGA
Sbjct: 16 KVLILDGGQGTELENRGINI--NSPVWSAAPFTSESFWEPSSQERKVVEEMYRDFMIAGA 73
Query: 57 DIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG 116
+I+ + YQAN ++ SE ++ L + ++ ++ + F +
Sbjct: 74 NILMTITYQANFQSI-----SENTSIKTLAAYKRFLDKI---------VSFTREF--IGE 117
Query: 117 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-AGVDYLALETIP 175
SIGP+ + EY+G Y D + +P +E + +D + ETIP
Sbjct: 118 ERYLIGSIGPWAAHV--SCEYTGDYGPHPENIDYYGFFKPQLENFNQNRDIDLIGFETIP 175
Query: 176 AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCLLANPDQIQAIG 232
E A++ + + ++ S D++ G E IS + + +G
Sbjct: 176 NFHELKAILSWDEDIISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLGNKINKNLLLMG 235
Query: 233 VNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
VNCV + + +++ + + P + +VYPN G
Sbjct: 236 VNCVSFNQSALILKMLHEHLPGMPLLVYPNSG 267
>sp|P87138|YDM7_SCHPO Uncharacterized protein C57A7.07c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC57A7.07c PE=4 SV=2
Length = 308
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 134/320 (41%), Gaps = 35/320 (10%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG T+ + + + + LW+S L PE V+ H +F++ I T
Sbjct: 3 MLDGGSTAILPK-LPESISESRLWTSEALVRYPEIVVKHHEEFLK-----VCDIISTFTY 56
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
D S Y D E + N L ++L L I A +G +
Sbjct: 57 QLDASIY-----DEKVEGVPLKQVYANSIGLPVYAREHLGLPNKYI----ALCLGSHAAT 107
Query: 387 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG------VDYLALETIPAEKEALALV 440
+ EY Y L +H+ +EA+ + +D++A E++P EA +
Sbjct: 108 IPGCMEYKMIYDKPTDFEMLYNFHKNRIEAIQASNPKAFEKIDFIAFESLPHVTEAEVVC 167
Query: 441 KLLREFPG--QKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 498
+L+++ G ++ W++ +C + + E +SS ++ L N D I IGVNC S +
Sbjct: 168 QLIQDMKGWSKRCWITCTCPERSTI---ERVSSIISKILSINHDSIWGIGVNCFHLSLLE 224
Query: 499 TLVRCIKQSHPT-VQTIVYPNKGGVWDSVHMKW--------LDTEDEYSILHYVPQWLEE 549
+ + + P+ + I+YP+ G++ + + + +E+S + L
Sbjct: 225 PIAKMLSSLLPSNITAILYPDGRGLYQNPDGTFSPGSTDHPAPSPEEWSTITAKYSNLHN 284
Query: 550 GVNIIGGCCEVTSYEIQQMR 569
G I+GGCCE + +R
Sbjct: 285 GNLILGGCCETNYNHLSLLR 304
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 129/286 (45%), Gaps = 39/286 (13%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG T+ + + + + LW+S L PE V+ H +F++ DII + YQ +
Sbjct: 3 MLDGGSTAILPK-LPESISESRLWTSEALVRYPEIVVKHHEEFLKV-CDIISTFTYQLDA 60
Query: 69 DNLTKLGYSEQ-EALDLLH---KSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASI 124
Y E+ E + L S+ L A++ L +I A +
Sbjct: 61 SI-----YDEKVEGVPLKQVYANSIGLPVYAREH------------LGLPNKYI--ALCL 101
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG------VDYLALETIPAEK 178
G + + EY Y L +H+ +EA+ + +D++A E++P
Sbjct: 102 GSHAATIPGCMEYKMIYDKPTDFEMLYNFHKNRIEAIQASNPKAFEKIDFIAFESLPHVT 161
Query: 179 EALALVKLLREFPG--QKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 236
EA + +L+++ G ++ W++ +C + + E +SS ++ L N D I IGVNC
Sbjct: 162 EAEVVCQLIQDMKGWSKRCWITCTCPERSTI---ERVSSIISKILSINHDSIWGIGVNCF 218
Query: 237 RPSHVSTLVRCIKQSHPT-VQTIVYPN-KGV-KLLDGSFTSQVSRH 279
S + + + + P+ + I+YP+ +G+ + DG+F+ + H
Sbjct: 219 HLSLLEPIAKMLSSLLPSNITAILYPDGRGLYQNPDGTFSPGSTDH 264
>sp|Q04898|YM99_YEAST Putative uncharacterized protein YMR321C OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YMR321C PE=4
SV=1
Length = 105
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY-S 538
NP+ + +G+NCV + ++ + Q+ P + + YPN G V+D+ WL D+ S
Sbjct: 9 NPN-LSFLGINCVSFNQSPDILESLHQALPNMALLAYPNSGEVYDTEKKIWLPNSDKLNS 67
Query: 539 ILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEF 575
V Q++ G IIGGCC + +IQ++ + ++
Sbjct: 68 WDTVVKQYISSGARIIGGCCRTSPKDIQEISAAVKKY 104
>sp|Q4JIJ3|METH_BOVIN Methionine synthase OS=Bos taurus GN=MTR PE=2 SV=1
Length = 1265
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 141/345 (40%), Gaps = 58/345 (16%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD---------GHPLWSS--VYLTTEPEACVETHRDFIRA 54
++ +LDG + + RH + + D PL + + T+P + H++++ A
Sbjct: 29 RIMVLDGGMGTMIQRHKLSEEDFRGQEFKDHARPLKGNNDILSITQPNVIYQIHKEYLLA 88
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQL-MNSAKDKENQTPDINLNKTFNL 113
GADII+++ + + ++ + Y L H + ++ M SA DI+L
Sbjct: 89 GADIIETNTFSST--SIAQADYG------LEHLAYRMNMCSAGVARKAAEDISLQTGIKR 140
Query: 114 LTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 173
A ++GP L ++T +L+ ++ + L+ GVD L +ET
Sbjct: 141 Y-----VAGALGPTNKTLSVSPSVERPDYRNITFDELVEAYKEQAKGLLDGGVDILLIET 195
Query: 174 I----PAEKEALALVKLL-REFPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQ 227
I A+ A+ KL E+ + ++S + D + T G+ + V S A+P
Sbjct: 196 IFDTANAKAALFAVQKLFEEEYVPRPVFISGTIVDKSGRTLSGQTGEAFVISVSHADP-- 253
Query: 228 IQAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSF--TSQVSRH 279
IG+NC +RP + T+ +C T + YPN G+ G + T V
Sbjct: 254 -LCIGLNCALGAAEMRP-FIETIGKCT-----TAYVLCYPNAGLPNTFGDYDETPHVMAM 306
Query: 280 TIKD--VDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
+KD VDG L C T D IR E + P
Sbjct: 307 HLKDFAVDG--------LVNIVGGCCGTTPDHIREIAEAVKNCKP 343
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 137/337 (40%), Gaps = 65/337 (19%)
Query: 265 VKLLDGSFTSQVSRHTIKDVD---------GHPLWSS--VYLTTEPEACVETHRDFIRGH 313
+ +LDG + + RH + + D PL + + T+P + H++++
Sbjct: 30 IMVLDGGMGTMIQRHKLSEEDFRGQEFKDHARPLKGNNDILSITQPNVIYQIHKEYLLA- 88
Query: 314 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL----IK 369
G + + + +S S+ +AD H + AGV A ++
Sbjct: 89 ----------GADIIETNTFSS---TSIAQADYGLEHLAYRMNMCSAGVARKAAEDISLQ 135
Query: 370 PSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 429
I A ++GP L ++T +L+ ++ + L+ GVD L +ET
Sbjct: 136 TGIKRYVAGALGPTNKTLSVSPSVERPDYRNITFDELVEAYKEQAKGLLDGGVDILLIET 195
Query: 430 I----PAEKEALALVKLLRE-FPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQ 483
I A+ A+ KL E + + ++S + D + T G+ + V S A+P
Sbjct: 196 IFDTANAKAALFAVQKLFEEEYVPRPVFISGTIVDKSGRTLSGQTGEAFVISVSHADP-- 253
Query: 484 IQAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKG-----GVWDSVHMKWLD 532
IG+NC +RP + T+ +C T + YPN G G +D
Sbjct: 254 -LCIGLNCALGAAEMRP-FIETIGKCT-----TAYVLCYPNAGLPNTFGDYD-------- 298
Query: 533 TEDEYSILHYVPQWLEEG-VNIIGGCCEVTSYEIQQM 568
E + + ++ + +G VNI+GGCC T I+++
Sbjct: 299 -ETPHVMAMHLKDFAVDGLVNIVGGCCGTTPDHIREI 334
>sp|Q9Z2Q4|METH_RAT Methionine synthase OS=Rattus norvegicus GN=Mtr PE=2 SV=1
Length = 1253
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 123/285 (43%), Gaps = 47/285 (16%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD---------GHPLWSS--VYLTTEPEACVETHRDFIRA 54
++ +LDG + + R+ + + + PL + + T+P+ + H++++ A
Sbjct: 16 RIMVLDGGMGTMIQRYKLSEENFQGQEFKDHSRPLKGNNDILSITQPDVIYQIHKEYLLA 75
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLL 114
GADII+++ + + ++ + Y L H + ++ + D + + L
Sbjct: 76 GADIIETNTFSST--SIAQADYG------LEHLAYRMNKCSADVARKAAE-----EITLQ 122
Query: 115 TGHIE-TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 173
TG A S+GP L ++T +L+ ++ + L+ GVD L +ET
Sbjct: 123 TGVKRFVAGSLGPTNKTLSVSPSVERPDYRNITFDELVEAYQEQAKGLLDGGVDILLIET 182
Query: 174 I----PAEKEALALVKLLRE--FPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPD 226
I A+ AL KL E + ++S + D + T G+ + VTS ++P
Sbjct: 183 IFDTANAKAALFALQKLFEENYASPRPIFISGTIVDKSGRTLSGQTGEAFVTSVSHSDP- 241
Query: 227 QIQAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
IG+NC +RP + T+ +C T + YPN G+
Sbjct: 242 --LCIGLNCALGAAEMRP-FIETIGKCT-----TAYVLCYPNAGL 278
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 131/336 (38%), Gaps = 58/336 (17%)
Query: 263 KGVKLLDGSFTSQVSRHTIKDVD---------GHPLWSS--VYLTTEPEACVETHRDFIR 311
K + +LDG + + R+ + + + PL + + T+P+ + H++++
Sbjct: 15 KRIMVLDGGMGTMIQRYKLSEENFQGQEFKDHSRPLKGNNDILSITQPDVIYQIHKEYLL 74
Query: 312 GHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPS 371
+ + T + H M + + E ++ GV
Sbjct: 75 AGADIIETNTFSSTSIAQADYGLEHLAYRMNKCSADVARKAAEEITLQTGVKRF------ 128
Query: 372 ISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI- 430
A S+GP L ++T +L+ ++ + L+ GVD L +ETI
Sbjct: 129 ----VAGSLGPTNKTLSVSPSVERPDYRNITFDELVEAYQEQAKGLLDGGVDILLIETIF 184
Query: 431 ---PAEKEALALVKLLRE--FPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQI 484
A+ AL KL E + ++S + D + T G+ + VTS ++P
Sbjct: 185 DTANAKAALFALQKLFEENYASPRPIFISGTIVDKSGRTLSGQTGEAFVTSVSHSDP--- 241
Query: 485 QAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKG-----GVWDSVHMKWLDT 533
IG+NC +RP + T+ +C T + YPN G G +D
Sbjct: 242 LCIGLNCALGAAEMRP-FIETIGKCT-----TAYVLCYPNAGLPNTFGDYD--------- 286
Query: 534 EDEYSILHYVPQWLEEG-VNIIGGCCEVTSYEIQQM 568
E + ++ + +G VN++GGCC T I+++
Sbjct: 287 ETPAMMAMHLKDFAVDGLVNVVGGCCGSTPDHIREI 322
>sp|Q54P92|METH_DICDI Methionine synthase OS=Dictyostelium discoideum GN=mtr PE=3 SV=1
Length = 1260
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 138/346 (39%), Gaps = 59/346 (17%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD---------GHPLWSSVYLT--TEPEACVETHRDFIRA 54
++ +LDG+ +++ + +KD D H L + L T+P E H ++ A
Sbjct: 23 RIMVLDGAMGTEIQKFKLKDNDYRGEEFKDFPHELGGNNDLLSLTQPHIIREIHCKYLEA 82
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLH-KSVQLMNSAKDKENQTPDINLNKTFNL 113
GAD I+++ + N+ ++ Y + + ++ +S +L SA + E D + +
Sbjct: 83 GADFIETNTFNGNI--FSQADYKMEHLVKRINIESARLAKSACE-EYTKKDPSRPRFVCG 139
Query: 114 LTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 173
G ASI P +V R E D +L++ + VEALV G+D + +ET
Sbjct: 140 AVGPTNKTASISP--SVER--PEARNVLFD-----ELVSGYLEQVEALVEGGIDVILVET 190
Query: 174 IPAEKEALALVKLLREF-----PGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQ 227
+ A + + EF P ++S + D + T G+ + TS AN
Sbjct: 191 VFDSLNCKAALFAIEEFFKTYSPRLPVFVSGTIVDKSGRTLSGQTGEAFYTSVASAN--- 247
Query: 228 IQAIGVNCVRPSHVSTLVRCIKQSHPTVQTI---------VYPNKGVKLLDGSF--TSQV 276
+ G+NC + ++ P +Q I YPN G+ G + T ++
Sbjct: 248 LMVFGLNCALGA---------QEMRPFLQNISKCSECYVSCYPNAGLPNTFGGYDETPEM 298
Query: 277 SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
IK+ L + V C T D IR I P
Sbjct: 299 MAEQIKEFAESGLLNIV------GGCCGTSPDHIRAFCNAIEGIAP 338
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 126/325 (38%), Gaps = 60/325 (18%)
Query: 265 VKLLDGSFTSQVSRHTIKDVD---------GHPLWSSVYLT--TEPEACVETHRDFIRGH 313
+ +LDG+ +++ + +KD D H L + L T+P E H ++
Sbjct: 24 IMVLDGAMGTEIQKFKLKDNDYRGEEFKDFPHELGGNNDLLSLTQPHIIREIHCKYLEA- 82
Query: 314 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWH---RPNVEA--LVRAGVDYLALI 368
G + + ++G+ ++AD H R N+E+ L ++ +
Sbjct: 83 ----------GADFIETNTFNGNI---FSQADYKMEHLVKRINIESARLAKSACEEYTKK 129
Query: 369 KPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE 428
PS ++GP ++ +L++ + VEALV G+D + +E
Sbjct: 130 DPSRPRFVCGAVGPTNKTASISPSVERPEARNVLFDELVSGYLEQVEALVEGGIDVILVE 189
Query: 429 TIPAEKEALALVKLLREF-----PGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPD 482
T+ A + + EF P ++S + D + T G+ + TS AN
Sbjct: 190 TVFDSLNCKAALFAIEEFFKTYSPRLPVFVSGTIVDKSGRTLSGQTGEAFYTSVASAN-- 247
Query: 483 QIQAIGVNC------VRP--SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE 534
+ G+NC +RP ++S C +P PN G +D E
Sbjct: 248 -LMVFGLNCALGAQEMRPFLQNISKCSECYVSCYPNAG---LPNTFGGYD---------E 294
Query: 535 DEYSILHYVPQWLEEG-VNIIGGCC 558
+ + ++ E G +NI+GGCC
Sbjct: 295 TPEMMAEQIKEFAESGLLNIVGGCC 319
>sp|P13009|METH_ECOLI Methionine synthase OS=Escherichia coli (strain K12) GN=metH PE=1
SV=5
Length = 1227
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 87/222 (39%), Gaps = 24/222 (10%)
Query: 370 PSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 429
P A +GP + + ++T L+A +R + +ALV G D + +ET
Sbjct: 123 PEKPRYVAGVLGPTNRTASISPDVNDPAFRNITFDGLVAAYRESTKALVEGGADLILIET 182
Query: 430 IPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI- 487
+ A A V ++ EF L + G +S T + +A+
Sbjct: 183 VFDTLNAKAAVFAVKTEFEALGVELPIMISGTITDASGRTLSGQTTEAFYNSLRHAEALT 242
Query: 488 -GVNC-VRP-------SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYS 538
G+NC + P +S + C +HP PN G +D LD + +
Sbjct: 243 FGLNCALGPDELRQYVQELSRIAECYVTAHPNAG---LPNAFGEYD------LDAD---T 290
Query: 539 ILHYVPQWLEEG-VNIIGGCCEVTSYEIQQMRIMIDEFNTKK 579
+ + +W + G +NI+GGCC T I M ++ +K
Sbjct: 291 MAKQIREWAQAGFLNIVGGCCGTTPQHIAAMSRAVEGLAPRK 332
Score = 36.2 bits (82), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 102/271 (37%), Gaps = 33/271 (12%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD--GHPL--W-------SSVYLTTEPEACVETHRDFIRA 54
++ +LDG + + + + + D G W + + + ++PE H + A
Sbjct: 15 RILVLDGGMGTMIQSYRLNEADFRGERFADWPCDLKGNNDLLVLSKPEVIAAIHNAYFEA 74
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLL 114
GADII+++ + + + A + A + +TP+ + +
Sbjct: 75 GADIIETNTFNSTTIAMADYQMESLSAEINFAAAKLARACADEWTARTPE--KPRYVAGV 132
Query: 115 TGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI 174
G ASI P + + ++T L+A +R + +ALV G D + +ET+
Sbjct: 133 LGPTNRTASISP---------DVNDPAFRNITFDGLVAAYRESTKALVEGGADLILIETV 183
Query: 175 PAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI-- 231
A A V ++ EF L + G +S T + +A+
Sbjct: 184 FDTLNAKAAVFAVKTEFEALGVELPIMISGTITDASGRTLSGQTTEAFYNSLRHAEALTF 243
Query: 232 GVNC-VRP-------SHVSTLVRCIKQSHPT 254
G+NC + P +S + C +HP
Sbjct: 244 GLNCALGPDELRQYVQELSRIAECYVTAHPN 274
>sp|P37586|METH_SALTY Methionine synthase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=metH PE=3 SV=3
Length = 1227
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 24/211 (11%)
Query: 370 PSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 429
P A +GP + + ++T L+A +R + +ALV G D + +ET
Sbjct: 123 PEKPRFVAGVLGPTNRTASISPDVNDPAFRNITFDQLVAAYRESTKALVEGGADLILIET 182
Query: 430 IPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI- 487
+ A A V ++ EF L + G +S T + +A+
Sbjct: 183 VFDTLNAKAAVFAVKEEFEALGVDLPIMISGTITDASGRTLSGQTTEAFYNSLRHAEALT 242
Query: 488 -GVNC-VRP-------SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYS 538
G+NC + P +S + C +HP PN G +D LD + +
Sbjct: 243 FGLNCALGPDELRQYVQELSRIAECYVTAHPNAG---LPNAFGEYD------LDAD---T 290
Query: 539 ILHYVPQWLEEG-VNIIGGCCEVTSYEIQQM 568
+ + +W E G +NI+GGCC T I M
Sbjct: 291 MAKQIREWAEAGFLNIVGGCCGTTPEHIAAM 321
Score = 34.7 bits (78), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 108/273 (39%), Gaps = 37/273 (13%)
Query: 6 KVKLLDGSFTSQVSRHTI--KDVDGHPL--W-------SSVYLTTEPEACVETHRDFIRA 54
++ +LDG + + + + +D G W + + + ++PE H + A
Sbjct: 15 RILVLDGGMGTMIQSYRLHEEDFRGERFADWPCDLKGNNDLLVLSKPEVIAAIHNAYFEA 74
Query: 55 GADIIQSSCYQANVDNLTKLGYS-EQEALDLLHKSVQLMNSAKDK-ENQTPDINLNKTFN 112
GADII+++ + N + Y E + ++ + + +L + D+ +TP+ F
Sbjct: 75 GADIIETNTF--NSTTIAMADYRMESLSAEINYAAAKLARACADEWTARTPE---KPRF- 128
Query: 113 LLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE 172
A +GP + + ++T L+A +R + +ALV G D + +E
Sbjct: 129 -------VAGVLGPTNRTASISPDVNDPAFRNITFDQLVAAYRESTKALVEGGADLILIE 181
Query: 173 TIPAEKEALALVKLLR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 231
T+ A A V ++ EF L + G +S T + +A+
Sbjct: 182 TVFDTLNAKAAVFAVKEEFEALGVDLPIMISGTITDASGRTLSGQTTEAFYNSLRHAEAL 241
Query: 232 --GVNC-VRP-------SHVSTLVRCIKQSHPT 254
G+NC + P +S + C +HP
Sbjct: 242 TFGLNCALGPDELRQYVQELSRIAECYVTAHPN 274
>sp|Q55786|METH_SYNY3 Methionine synthase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=metH PE=3 SV=1
Length = 1195
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 124/312 (39%), Gaps = 42/312 (13%)
Query: 261 PNKGVKLLDGSFTS--QVSRHTIKDVDGHPLWS-SVYLT-TEPEACVETHRDFIRGHIET 316
P++ V + DG+ + QV T D G + YL T+PEA HR F +
Sbjct: 12 PDRPVLVFDGAMGTNLQVQNLTAADFGGAEYEGCNEYLVHTKPEAVATVHRAFYEAGADV 71
Query: 317 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAW-HRPNVEALVRAGVDYLALIKPSISSQ 375
+ GT L + E DL + N A A P
Sbjct: 72 VETDTFGGTPL------------VLAEYDLADQSYYLNKAAAELAKAVAAEFSTPEKPRF 119
Query: 376 TAASIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYLALET---IP 431
A S+GP GT L GH DS+ +A ++ V L GVD L +ET +
Sbjct: 120 VAGSMGP-GTKL----PTLGHVDYDSLKDAYVV-----QVRGLYDGGVDLLLVETCQDVL 169
Query: 432 AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-LANPDQIQAIGVN 490
K AL ++ + G + L S +T + L+ + + + L + P I +G+N
Sbjct: 170 QIKAALNAIEQVFAEKGDRLPLMVSVTMETMGTM--LVGTEMAAALAILEPYPIDILGLN 227
Query: 491 CVR-PSHVSTLVRCIKQSHPTVQTIVYPNKG---GVWDSVHMKWLDTEDEYSILHYVPQW 546
C P + V+ + + P V + + PN G V + E + S++H++
Sbjct: 228 CATGPDLMKEHVKYLSEHSPFVVSCI-PNAGLPENVGGQAFYRLTPMELQMSLMHFIEDL 286
Query: 547 LEEGVNIIGGCC 558
GV +IGGCC
Sbjct: 287 ---GVQVIGGCC 295
Score = 39.3 bits (90), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 115/269 (42%), Gaps = 36/269 (13%)
Query: 7 VKLLDGSFTS--QVSRHTIKDVDGHPLWS-SVYLT-TEPEACVETHRDFIRAGADIIQSS 62
V + DG+ + QV T D G + YL T+PEA HR F AGAD++++
Sbjct: 16 VLVFDGAMGTNLQVQNLTAADFGGAEYEGCNEYLVHTKPEAVATVHRAFYEAGADVVETD 75
Query: 63 CYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAA 122
+ L + ++Q L+K+ + A E TP+ F A
Sbjct: 76 TFGGTPLVLAEYDLADQSY--YLNKAAAELAKAVAAEFSTPE---KPRF--------VAG 122
Query: 123 SIGPYGTVLRDGSEYSGHY-VDSMTEADLIAWHRPNVEALVRAGVDYLALET---IPAEK 178
S+GP GT L GH DS+ +A ++ V L GVD L +ET + K
Sbjct: 123 SMGP-GTKL----PTLGHVDYDSLKDAYVV-----QVRGLYDGGVDLLLVETCQDVLQIK 172
Query: 179 EALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL-LANPDQIQAIGVNCVR 237
AL ++ + G + L S +T + L+ + + + L + P I +G+NC
Sbjct: 173 AALNAIEQVFAEKGDRLPLMVSVTMETMGTM--LVGTEMAAALAILEPYPIDILGLNCAT 230
Query: 238 -PSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
P + V+ + + P V + + PN G+
Sbjct: 231 GPDLMKEHVKYLSEHSPFVVSCI-PNAGL 258
>sp|Q9AJQ8|METH_VIBFI Methionine synthase OS=Vibrio fischeri GN=metH PE=3 SV=1
Length = 1226
Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 108/284 (38%), Gaps = 39/284 (13%)
Query: 307 RDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA--LVRAGVDY 364
RD ++E A I T + + ++S++E N EA L R D
Sbjct: 67 RDIHEAYLEAGADILETNTFNATTIAMADYDMESLSE-------EINFEAAKLAREVADK 119
Query: 365 LALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY 424
P+ A +GP + + +++ +L+ + + AL+R G D
Sbjct: 120 WTEKTPNKPRYVAGVLGPTNRTCSISPDVNDPGFRNVSFDELVEAYSESTRALIRGGSDL 179
Query: 425 LALETI----PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN 480
+ +ETI A+ + A+ + E L + G +S T
Sbjct: 180 ILIETIFDTLNAKACSFAVESVFEEL---GITLPVMISGTITDASGRTLSGQTTEAFYNA 236
Query: 481 PDQIQAI--GVNCVRP--------SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW 530
++ I G+NC S +S + C +HP PN G +D
Sbjct: 237 LRHVKPISFGLNCALGPDELREYVSELSRISECYVSAHPNAG---LPNAFGEYD------ 287
Query: 531 LDTEDEYSILHYVPQWLEEG-VNIIGGCCEVTSYEIQQMRIMID 573
L ED + +V +W G +N+IGGCC T I+QM ++++
Sbjct: 288 LSPED---MAEHVAEWASSGFLNLIGGCCGTTPEHIRQMALVVE 328
>sp|A6H5Y3|METH_MOUSE Methionine synthase OS=Mus musculus GN=Mtr PE=2 SV=1
Length = 1253
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 123/285 (43%), Gaps = 47/285 (16%)
Query: 6 KVKLLDGSFTSQVSRHTI-------KDVDGH--PLWSS--VYLTTEPEACVETHRDFIRA 54
++ +LDG + + R+ + ++ H PL + + T+P+ + H++++ A
Sbjct: 16 RIMVLDGGMGTMIQRYKLSEEHFQGQEFKDHSRPLKGNNDILSITQPDIIYQIHKEYLLA 75
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLL 114
GADII+++ + + ++ + Y L H + ++ + D + + L
Sbjct: 76 GADIIETNTFSST--SIAQADYG------LEHLAYRMNKCSADVARKAAE-----EITLQ 122
Query: 115 TGHIE-TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 173
TG A ++GP L ++T +L+ ++ + L+ VD L +ET
Sbjct: 123 TGVKRFVAGALGPTNKTLSVSPSVERPDYRNITFDELVDAYQEQAKGLLDGRVDILLIET 182
Query: 174 I----PAEKEALALVKLLRE--FPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPD 226
I A+ A+ L E P + ++S + D + T G+ + VTS ++P
Sbjct: 183 IFDTANAKAALFAIQNLFEENYAPPRPIFISGTIVDKSGRTLSGQTGEAFVTSVSHSDP- 241
Query: 227 QIQAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
IG+NC +RP + T+ +C T + YPN G+
Sbjct: 242 --LCIGLNCSLGAAEMRP-FIETIGKCT-----TAYVLCYPNAGL 278
Score = 40.8 bits (94), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 37/220 (16%)
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
++ + A ++GP L ++T +L+ ++ + L+ VD L +
Sbjct: 121 LQTGVKRFVAGALGPTNKTLSVSPSVERPDYRNITFDELVDAYQEQAKGLLDGRVDILLI 180
Query: 428 ETI----PAEKEALALVKLLRE--FPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLAN 480
ETI A+ A+ L E P + ++S + D + T G+ + VTS ++
Sbjct: 181 ETIFDTANAKAALFAIQNLFEENYAPPRPIFISGTIVDKSGRTLSGQTGEAFVTSVSHSD 240
Query: 481 PDQIQAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKG-----GVWDSVHMK 529
P IG+NC +RP + T+ +C T + YPN G G +D
Sbjct: 241 P---LCIGLNCSLGAAEMRP-FIETIGKCT-----TAYVLCYPNAGLPNTFGDYD----- 286
Query: 530 WLDTEDEYSILHYVPQWLEEG-VNIIGGCCEVTSYEIQQM 568
E ++ ++ + +G VNI+GGCC T I+++
Sbjct: 287 ----ETPSTMATHLKDFAVDGLVNIVGGCCGSTPDHIREI 322
>sp|O33259|METH_MYCTU Methionine synthase OS=Mycobacterium tuberculosis GN=metH PE=3 SV=1
Length = 1192
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 113/274 (41%), Gaps = 40/274 (14%)
Query: 6 KVKLLDGSFTSQVSRH--TIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+V + DG+ +Q+ T+ D G + + T P+ HR++ AGAD ++++
Sbjct: 20 RVMVGDGAMGTQLQAADLTLDDFRGLEGCNEILNETRPDVLETIHRNYFEAGADAVETNT 79
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
+ N+ NL +++ DL K + D E +PD K + L S
Sbjct: 80 FGCNLSNLGDYDIADR-IRDLSQKGTAIARRVAD-ELGSPD---RKRYVL--------GS 126
Query: 124 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALAL 183
+GP + G D+ TEA L ++ G D + +ET L
Sbjct: 127 MGPGTKLPTLGHTEYAVIRDAYTEAAL---------GMLDGGADAILVETCQ------DL 171
Query: 184 VKLLREFPGQKAWLSFSCKD-------DTHTSHGELISSAVTSCLLA-NPDQIQAIGVNC 235
++L G + ++ + + T+ L+ S + + L A P + IG+NC
Sbjct: 172 LQLKAAVLGSRRAMTRAGRHIPVFAHVTVETTGTMLLGSEIGAALTAVEPLGVDMIGLNC 231
Query: 236 VR-PSHVSTLVRCIKQSHPTVQTIVYPNKGVKLL 268
P+ +S +R + + H + V PN G+ +L
Sbjct: 232 ATGPAEMSEHLRHLSR-HARIPVSVMPNAGLPVL 264
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 468 LISSAVTSCLLA-NPDQIQAIGVNCVR-PSHVSTLVRCIKQSHPTVQTIVYPNKG-GVWD 524
L+ S + + L A P + IG+NC P+ +S +R + + H + V PN G V
Sbjct: 207 LLGSEIGAALTAVEPLGVDMIGLNCATGPAEMSEHLRHLSR-HARIPVSVMPNAGLPVLG 265
Query: 525 SVHMKWLDTEDEYS--ILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+ ++ DE + + ++ ++ G++++GGCC T I+++
Sbjct: 266 AKGAEYPLLPDELAEALAGFIAEF---GLSLVGGCCGTTPAHIREV 308
>sp|Q5E814|METH_VIBF1 Methionine synthase OS=Vibrio fischeri (strain ATCC 700601 / ES114)
GN=metH PE=3 SV=1
Length = 1226
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 108/284 (38%), Gaps = 39/284 (13%)
Query: 307 RDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA--LVRAGVDY 364
RD ++E A I T + + ++S++E N EA L R D
Sbjct: 67 RDIHEAYLEAGADILETNTFNATTIAMADYDMESLSE-------EINFEAAKLAREVADK 119
Query: 365 LALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY 424
P+ A +GP + + +++ +L+ + + AL+R G D
Sbjct: 120 WTEKTPNKPRYVAGVLGPTNRTCSISPDVNDPGFRNVSFDELVEAYSESTRALIRGGSDL 179
Query: 425 LALETI----PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN 480
+ +ETI A+ + A+ + E L + G +S T
Sbjct: 180 ILIETIFDTLNAKACSFAVESVFEEL---DITLPVMISGTITDASGRTLSGQTTEAFYNA 236
Query: 481 PDQIQAI--GVNCVRP--------SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW 530
++ I G+NC S +S + C +HP PN G +D
Sbjct: 237 LRHVKPISFGLNCALGPDELREYVSDLSRISECYVSAHPNAG---LPNAFGEYD------ 287
Query: 531 LDTEDEYSILHYVPQWLEEG-VNIIGGCCEVTSYEIQQMRIMID 573
L ED + +V +W G +N+IGGCC T I+QM ++++
Sbjct: 288 LSPED---MAEHVAEWASSGFLNLIGGCCGTTPEHIRQMALVVE 328
>sp|Q99707|METH_HUMAN Methionine synthase OS=Homo sapiens GN=MTR PE=1 SV=2
Length = 1265
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 130/310 (41%), Gaps = 52/310 (16%)
Query: 6 KVKLLDGSFTSQVSRHTI-------KDVDGH--PLWSS--VYLTTEPEACVETHRDFIRA 54
++ +LDG + + R + ++ H PL + + T+P+ + H++++ A
Sbjct: 29 RIMVLDGGMGTMIQREKLNEEHFRGQEFKDHARPLKGNNDILSITQPDVIYQIHKEYLLA 88
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQL-MNSAKDKENQTPDINLNKTFNL 113
GADII+++ + + ++ + Y L H + ++ M SA ++ L
Sbjct: 89 GADIIETNTFSST--SIAQADYG------LEHLAYRMNMCSAGVARKAAEEVTLQTGIKR 140
Query: 114 LTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 173
A ++GP L ++T +L+ ++ + L+ GVD L +ET
Sbjct: 141 F-----VAGALGPTNKTLSVSPSVERPDYRNITFDELVEAYQEQAKGLLDGGVDILLIET 195
Query: 174 I----PAEKEALALVKLLRE-FPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQ 227
I A+ AL L E + + ++S + D + T G+ V S P
Sbjct: 196 IFDTANAKAALFALQNLFEEKYAPRPIFISGTIVDKSGRTLSGQTGEGFVISVSHGEP-- 253
Query: 228 IQAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSF---TSQVSR 278
IG+NC +RP + + +C T + YPN G+ G + S +++
Sbjct: 254 -LCIGLNCALGAAEMRP-FIEIIGKCT-----TAYVLCYPNAGLPNTFGDYDETPSMMAK 306
Query: 279 HTIKD--VDG 286
H +KD +DG
Sbjct: 307 H-LKDFAMDG 315
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 134/336 (39%), Gaps = 57/336 (16%)
Query: 262 NKGVKLLDGSFTSQVSRHTI-------KDVDGH--PLWSS--VYLTTEPEACVETHRDFI 310
K + +LDG + + R + ++ H PL + + T+P+ + H++++
Sbjct: 27 QKRIMVLDGGMGTMIQREKLNEEHFRGQEFKDHARPLKGNNDILSITQPDVIYQIHKEYL 86
Query: 311 RGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL--- 367
G + + + +S S+ +AD H + AGV A
Sbjct: 87 LA-----------GADIIETNTFSS---TSIAQADYGLEHLAYRMNMCSAGVARKAAEEV 132
Query: 368 -IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 426
++ I A ++GP L ++T +L+ ++ + L+ GVD L
Sbjct: 133 TLQTGIKRFVAGALGPTNKTLSVSPSVERPDYRNITFDELVEAYQEQAKGLLDGGVDILL 192
Query: 427 LETI----PAEKEALALVKLLRE-FPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLAN 480
+ETI A+ AL L E + + ++S + D + T G+ V S
Sbjct: 193 IETIFDTANAKAALFALQNLFEEKYAPRPIFISGTIVDKSGRTLSGQTGEGFVISVSHGE 252
Query: 481 PDQIQAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE 534
P IG+NC +RP + + +C T + YPN G + + D +
Sbjct: 253 P---LCIGLNCALGAAEMRP-FIEIIGKCT-----TAYVLCYPNAG-----LPNTFGDYD 298
Query: 535 DEYSIL--HYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
+ S++ H ++ VNI+GGCC T I+++
Sbjct: 299 ETPSMMAKHLKDFAMDGLVNIVGGCCGSTPDHIREI 334
>sp|Q5XGM3|BHMT1_XENLA Betaine--homocysteine S-methyltransferase 1 OS=Xenopus laevis
GN=bhmt PE=2 SV=1
Length = 403
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 30/185 (16%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V + DG F + + V P W+ PEA + HR+F+RAGA+++Q+ +
Sbjct: 18 EVVIGDGGFVFALEKRGY--VKAGP-WTPEAAVEHPEAVRQLHREFLRAGANVMQTFTFY 74
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNS-AKDKENQTPDINLNKTFNLLTGHIETAASI 124
A+ D L G E + S Q +N A D + N+ L+ G + S
Sbjct: 75 ASDDKLENRGNYVAEKI-----SGQKVNEVACDIAREV----ANEGDALVAGGVSQTPS- 124
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
Y+ +E ++ R ++ ++ VD+L E +EA+ V
Sbjct: 125 ----------------YLSCKSEVEVKGIFRKQLDVFIKKNVDFLIAEYFEHVEEAVWAV 168
Query: 185 KLLRE 189
++L+E
Sbjct: 169 EVLKE 173
Score = 37.7 bits (86), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 123/333 (36%), Gaps = 52/333 (15%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V + DG F + + V P W+ PEA + HR+F+R + Y
Sbjct: 19 VVIGDGGFVFALEKRGY--VKAGP-WTPEAAVEHPEAVRQLHREFLRAGANVMQTFTFYA 75
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
+ D E G+YV A+ I+ + N ++ A + G
Sbjct: 76 S--DDKLENRGNYV-----AEKISGQKVN-----------------EVACDIAREVANEG 111
Query: 385 TVL-RDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 443
L G + Y+ +E ++ R ++ ++ VD+L E +EA+ V++L
Sbjct: 112 DALVAGGVSQTPSYLSCKSEVEVKGIFRKQLDVFIKKNVDFLIAEYFEHVEEAVWAVEVL 171
Query: 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVSTLVR 502
+E K + C +G +S + LA +GVNC P V+
Sbjct: 172 KE--SGKPVAATLCIGPEGDLNG--VSPGECAVRLAKAG-ASVVGVNCHFDPMTCVATVK 226
Query: 503 CIKQ--------SHPTVQTIVY--PNKG--GVWDSVHMKW-LDTE--DEYSILHYVPQWL 547
+K+ +H Q + Y P+ G G D + L+ + I Y
Sbjct: 227 LMKEGLVAAKVKAHLMTQPLAYHTPDCGKQGFIDLPEFPFALEPRIVTRWDIHKYARAAY 286
Query: 548 EEGVNIIGGCCEVTSYEIQQMRIMIDEFNTKKN 580
+ GV IGGCC +E R + +E ++
Sbjct: 287 DLGVRYIGGCC---GFEPYHTRAIAEELAPERG 316
>sp|Q49775|METH_MYCLE Methionine synthase OS=Mycobacterium leprae (strain TN) GN=metH
PE=3 SV=3
Length = 1206
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 42/275 (15%)
Query: 6 KVKLLDGSFTSQV--SRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+V + DG+ +Q+ + T+ D G + + T P+ HR + AGAD+++++
Sbjct: 22 RVMVGDGAMGTQLQDAELTLDDFRGLEGCNEILNETRPDVLETIHRRYFEAGADLVETNT 81
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAAS 123
+ N+ NL +++ DL + + D E TPD +K + L S
Sbjct: 82 FGCNLSNLGDYDIADK-IRDLSQRGTVIARRVAD-ELTTPD---HKRYVL--------GS 128
Query: 124 IGPYGTVLRDGSEYSGHYV-DSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA 182
+GP GT L V D+ TE+ L ++ G D + +ET
Sbjct: 129 MGP-GTKLPTLGHTEYRVVRDAYTESAL---------GMLDGGADAVLVETCQ------D 172
Query: 183 LVKLLREFPGQKAWLSFSCKD-------DTHTSHGELISSAVTSCLLA-NPDQIQAIGVN 234
L++L G + ++ + + T+ L+ S + + L A P + IG+N
Sbjct: 173 LLQLKAAVLGSRRAMTQAGRHIPVFVHVTVETTGTMLLGSEIGAALAAVEPLGVDMIGLN 232
Query: 235 CVR-PSHVSTLVRCIKQSHPTVQTIVYPNKGVKLL 268
C P+ +S +R + + H + V PN G+ +L
Sbjct: 233 CATGPAEMSEHLRHLSK-HARIPVSVMPNAGLPVL 266
>sp|Q5M8Z0|BHMT1_XENTR Betaine--homocysteine S-methyltransferase 1 OS=Xenopus tropicalis
GN=bhmt PE=2 SV=1
Length = 403
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 30/185 (16%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V + DG F + + V P W+ PEA + HR+F+RAGA+++Q+ +
Sbjct: 18 EVVIGDGGFVFALEKRGY--VKAGP-WTPEAAVEHPEAVRQLHREFLRAGANVMQTFTFY 74
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASI 124
A+ D L G + + S Q +N A D + N+ L+ G + S
Sbjct: 75 ASDDKLENRGNYVAKKI-----SGQKVNEAACDIAREV----ANEGDALVAGGVSQTPS- 124
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
Y+ +E ++ R ++ ++ VD+L E +EA+ V
Sbjct: 125 ----------------YLSCKSEVEVKGIFRKQLDVFIKKNVDFLIAEYFEHVEEAVWAV 168
Query: 185 KLLRE 189
++L+E
Sbjct: 169 EVLKE 173
>sp|Q87L95|METH_VIBPA Methionine synthase OS=Vibrio parahaemolyticus serotype O3:K6
(strain RIMD 2210633) GN=metH PE=3 SV=1
Length = 1226
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 30/179 (16%)
Query: 405 DLIAWHRPNVEALVRAGVDYLALETI----PAEKEALALVKLLREFPGQKAWLSFSCKDD 460
+L+ + + AL+R G D + +ETI A+ A A+ + E L
Sbjct: 159 ELVEAYSESTRALIRGGADLILIETIFDTLNAKACAFAVDSVFEEL---GVALPVMISGT 215
Query: 461 THTSHGELISSAVTSCLLANPDQIQ--AIGVNC------VRP--SHVSTLVRCIKQSHPT 510
+ G +S T + ++ + G+NC +RP +S + +HP
Sbjct: 216 ITDASGRTLSGQTTEAFYNSLRHVRPLSFGLNCALGPDELRPYVEELSRISESFVSAHPN 275
Query: 511 VQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEG-VNIIGGCCEVTSYEIQQM 568
PN G +D L ED + +V +W G +N+IGGCC T I+QM
Sbjct: 276 AG---LPNAFGEYD------LSPED---MAEHVKEWASSGFLNLIGGCCGTTPEHIRQM 322
Score = 33.1 bits (74), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 28/183 (15%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD--GHPL--W-------SSVYLTTEPEACVETHRDFIRA 54
++ L+DG + + + +++ D G W + + + ++P+ E H ++ A
Sbjct: 16 RILLIDGGMGTMIQGYKLEEQDYRGERFANWHCDLKGNNDLLVLSQPQLIKEIHSAYLEA 75
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEAL--DLLHKSVQLMNSAKDK-ENQTPDINLNKTF 111
GADI++++ + A + E E+L ++ + +L D+ +TPD +
Sbjct: 76 GADILETNTFNATT---IAMADYEMESLSEEINFAAAKLAREVADEWTAKTPD--KPRYV 130
Query: 112 NLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 171
+ G SI P V G Y D + EA + + AL+R G D + +
Sbjct: 131 AGVLGPTNRTCSISP--DVNDPG--YRNVSFDELVEA-----YSESTRALIRGGADLILI 181
Query: 172 ETI 174
ETI
Sbjct: 182 ETI 184
>sp|O35490|BHMT1_MOUSE Betaine--homocysteine S-methyltransferase 1 OS=Mus musculus GN=Bhmt
PE=2 SV=1
Length = 407
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 30/184 (16%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V + DG F + + V P W+ PEA + HR+F+RAG++++Q+ +
Sbjct: 21 EVVIGDGGFVFALEKRGY--VKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFY 77
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASI 124
A+ D L G E + S Q +N A D Q D + L+ G + S
Sbjct: 78 ASEDKLENRGNYVAEKI-----SGQKVNEAACDIARQVAD----EGDALVAGGVSQTPS- 127
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
Y+ +E ++ R +E ++ VD+L E +EA+ V
Sbjct: 128 ----------------YLSCKSEVEVKKIFRQQLEVFMKKNVDFLIAEYFEHVEEAVWAV 171
Query: 185 KLLR 188
+ L+
Sbjct: 172 EALK 175
Score = 36.2 bits (82), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 112/327 (34%), Gaps = 61/327 (18%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V + DG F + + V P W+ PEA + HR+F+R + Y
Sbjct: 22 VVIGDGGFVFALEKRGY--VKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYA 78
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
+ D E G+YV A+ I+ + N A I+ Q A
Sbjct: 79 S--EDKLENRGNYV-----AEKISGQKVNEAAC-------------DIARQVADE---GD 115
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
++ G + Y+ +E ++ R +E ++ VD+L E +EA+ V+ L+
Sbjct: 116 ALVAGGVSQTPSYLSCKSEVEVKKIFRQQLEVFMKKNVDFLIAEYFEHVEEAVWAVEALK 175
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVSTLVRC 503
K + C HG + A +GVNC PS V+
Sbjct: 176 A--SGKPVAATMCIGPEGDLHGVPPGECAVRLVKAG---ASIVGVNCHFDPSVSLQTVKL 230
Query: 504 IKQSHPTVQTIVY----------PNKG------------GVWDSVHMKWLDTEDEYSILH 541
+K+ + Y P+ G G+ V +W I
Sbjct: 231 MKEGLEAARLKAYLMSQPLAYHTPDCGKQGFIDLPEFPFGLEPRVATRW-------DIQK 283
Query: 542 YVPQWLEEGVNIIGGCCEVTSYEIQQM 568
Y + GV IGGCC Y I+ +
Sbjct: 284 YAREAYNLGVRYIGGCCGFEPYHIRAI 310
>sp|Q95332|BHMT1_PIG Betaine--homocysteine S-methyltransferase 1 (Fragment) OS=Sus
scrofa GN=BHMT PE=1 SV=3
Length = 278
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 30/184 (16%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V + DG F + + V P W+ PEA + HR+F+RAG++++Q+ +
Sbjct: 21 EVVIGDGGFVFALEKRGY--VKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFY 77
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASI 124
A+ D L G E + S Q +N A D Q D + L+ G + S
Sbjct: 78 ASEDKLENRGNYVAEKI-----SGQKVNEAACDIARQVAD----EGDALVAGGVSQTPS- 127
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
Y+ +E ++ R +E ++ VD+L E +EA+ V
Sbjct: 128 ----------------YLSCKSETEVKKVFRQQLEVFMKKNVDFLIAEYFEHVEEAVWAV 171
Query: 185 KLLR 188
+ L+
Sbjct: 172 EALK 175
>sp|Q09582|METH_CAEEL Probable methionine synthase OS=Caenorhabditis elegans GN=nos-1
PE=1 SV=1
Length = 1249
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 82/206 (39%), Gaps = 29/206 (14%)
Query: 378 ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI---PAEK 434
+IGP L ++T +L+ + +L++ GVD L +ET+ K
Sbjct: 132 GAIGPTNRTLSISPSVEKPDFRNVTFQELVKAYGDQARSLIQGGVDVLLVETVFDSANAK 191
Query: 435 EALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ--AIGV 489
AL ++ L E P +LS + D G +S L + Q + A+G+
Sbjct: 192 AALFAIRTLFEDEGVPEMPVFLSGTIVD----MSGRTLSGQTGEAFLVSTKQGKPMAVGL 247
Query: 490 NC-VRPSHVSTLVRCIKQSHPTVQTIVYPNKG-----GVWDSVHMKWLDTEDEYSILHYV 543
NC + + V + + + I YPN G G +D + D E++
Sbjct: 248 NCALGAKDMRQFVDNMSKWSDSF-IICYPNAGLPNALGGYDETPEEMADVLREFA----- 301
Query: 544 PQWLEEG-VNIIGGCCEVTSYEIQQM 568
+G VNIIGGCC T I M
Sbjct: 302 ----RDGLVNIIGGCCGTTPDHINAM 323
Score = 35.8 bits (81), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 111/281 (39%), Gaps = 39/281 (13%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD---------GHPLWSSVYL--TTEPEACVETHRDFIRA 54
++ ++DG+ + + R +++ D PL + L T P+ + H+ ++ A
Sbjct: 17 RIMIIDGAMGTMIQREYMEEEDFRGEILKDHDKPLKGNNDLLSITRPDIIYKIHKLYLEA 76
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLL 114
GAD ++++ + T + ++ L+H+ SA D+
Sbjct: 77 GADFVETNTFSG-----TTIAQADYRCEHLVHEIN--YQSALVARRACDDV------GAA 123
Query: 115 TGHIE-TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 173
TG +IGP L ++T +L+ + +L++ GVD L +ET
Sbjct: 124 TGRRRYVCGAIGPTNRTLSISPSVEKPDFRNVTFQELVKAYGDQARSLIQGGVDVLLVET 183
Query: 174 I---PAEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQ 227
+ K AL ++ L E P +LS + D G +S L + Q
Sbjct: 184 VFDSANAKAALFAIRTLFEDEGVPEMPVFLSGTIVD----MSGRTLSGQTGEAFLVSTKQ 239
Query: 228 IQ--AIGVNC-VRPSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
+ A+G+NC + + V + + + I YPN G+
Sbjct: 240 GKPMAVGLNCALGAKDMRQFVDNMSKWSDSF-IICYPNAGL 279
>sp|Q5I597|BHMT1_BOVIN Betaine--homocysteine S-methyltransferase 1 OS=Bos taurus GN=BHMT
PE=2 SV=1
Length = 407
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 30/184 (16%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V + DG F + + V P W+ PEA + HR+F+RAG++++Q+ +
Sbjct: 21 EVIIGDGGFVFALEKRGY--VKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFY 77
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASI 124
A+ D L G E + S Q +N A D Q D + L+ G + S
Sbjct: 78 ASEDKLENRGNYVAEKI-----SGQKVNEAACDIARQVAD----EGDALVAGGVSQTPS- 127
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
Y+ +E ++ + +E V+ VD+L E +EA+ V
Sbjct: 128 ----------------YLSCKSETEVKKVFQQQLEVFVKKNVDFLIAEYFEHVEEAVWAV 171
Query: 185 KLLR 188
+ L+
Sbjct: 172 EALK 175
Score = 35.8 bits (81), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 119/326 (36%), Gaps = 67/326 (20%)
Query: 269 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLR 328
DG F + + V P W+ PEA + HR+F+R + Y +
Sbjct: 26 DGGFVFALEKRGY--VKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYAS--E 80
Query: 329 DGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLR 388
D E G+YV A+ I+ + N A I+ Q A ++
Sbjct: 81 DKLENRGNYV-----AEKISGQKVNEAAC-------------DIARQVADE---GDALVA 119
Query: 389 DGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPG 448
G + Y+ +E ++ + +E V+ VD+L E +EA+ V+ L+ G
Sbjct: 120 GGVSQTPSYLSCKSETEVKKVFQQQLEVFVKKNVDFLIAEYFEHVEEAVWAVEALKA-SG 178
Query: 449 Q--KAWLSFSCKDDTHT-SHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVSTLVRCI 504
+ A + + D H+ + GE V + +GVNC P+ V+ +
Sbjct: 179 KPVAATMCIGPEGDLHSVTPGECAVRLVKAG-------ASIVGVNCHFDPTISLQTVKLM 231
Query: 505 KQ--------SHPTVQTIVY--PNKG------------GVWDSVHMKWLDTEDEYSILHY 542
K+ +H Q + Y P+ G G+ V +W I Y
Sbjct: 232 KEGLEAAGLKAHLMSQPLAYHTPDCGKQGFIDLPEFPFGLEPRVATRW-------DIQKY 284
Query: 543 VPQWLEEGVNIIGGCCEVTSYEIQQM 568
+ GV IGGCC Y I+ +
Sbjct: 285 AREAYNLGVRYIGGCCGFEPYHIRAI 310
>sp|Q7MHB1|METH_VIBVY Methionine synthase OS=Vibrio vulnificus (strain YJ016) GN=metH
PE=3 SV=1
Length = 1226
Score = 41.6 bits (96), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 32/185 (17%)
Query: 405 DLIAWHRPNVEALVRAGVDYLALETI----PAEKEALALVKLLREFP-GQKAWLSFSCKD 459
+L+ + + AL+R G D + +ETI A+ A A+ + E +S + D
Sbjct: 159 ELVEAYSESTRALIRGGSDLILIETIFDTLNAKACAFAVESVFEELGFALPVMISGTITD 218
Query: 460 DTHTSHGELISSAVTSCLLANPDQIQAI--GVNC------VRP--SHVSTLVRCIKQSHP 509
+ G +S T + ++ I G+NC +RP +S + +HP
Sbjct: 219 ----ASGRTLSGQTTEAFYNSLRHVRPISFGLNCALGPDELRPYVEELSRISETFVSTHP 274
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEG-VNIIGGCCEVTSYEIQQM 568
PN G +D L E+ + +V +W + G +N+IGGCC T I+ M
Sbjct: 275 NAG---LPNAFGEYD------LSPEE---MAEHVKEWAQSGFLNLIGGCCGTTPEHIRHM 322
Query: 569 RIMID 573
+ ++
Sbjct: 323 AMAVE 327
>sp|Q8DCJ7|METH_VIBVU Methionine synthase OS=Vibrio vulnificus (strain CMCP6) GN=metH
PE=3 SV=1
Length = 1226
Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 32/185 (17%)
Query: 405 DLIAWHRPNVEALVRAGVDYLALETI----PAEKEALALVKLLREFP-GQKAWLSFSCKD 459
+L+ + + AL+R G D + +ETI A+ A A+ + E +S + D
Sbjct: 159 ELVEAYSESTRALIRGGSDLILIETIFDTLNAKACAFAVDSVFEELGFALPVMISGTITD 218
Query: 460 DTHTSHGELISSAVTSCLLANPDQIQAI--GVNC------VRP--SHVSTLVRCIKQSHP 509
+ G +S T + ++ I G+NC +RP +S + +HP
Sbjct: 219 ----ASGRTLSGQTTEAFYNSLRHVRPISFGLNCALGPDELRPYVEELSRISETFVSTHP 274
Query: 510 TVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEG-VNIIGGCCEVTSYEIQQM 568
PN G +D L E+ + +V +W + G +N+IGGCC T I+ M
Sbjct: 275 NAG---LPNAFGEYD------LSPEE---MAEHVKEWAQSGFLNLIGGCCGTTPEHIRHM 322
Query: 569 RIMID 573
+ ++
Sbjct: 323 AMAVE 327
>sp|A8XY95|METH_CAEBR Probable methionine synthase OS=Caenorhabditis briggsae GN=nos-1
PE=3 SV=2
Length = 1273
Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 371 SISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI 430
I +IGP L ++T +L+ + +L++ GVD L +ET+
Sbjct: 125 GIRRYVCGAIGPTNRTLSISPSVEKPDFRNVTFQELVKAYGDQARSLIQGGVDVLLVETV 184
Query: 431 ---PAEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 484
K AL ++ L E P +LS + D + G +S L + Q
Sbjct: 185 FDSANAKAALFAIRTLFEDEGVPEIPVFLSGTIVDMS----GRTLSGQTGEAFLVSTKQG 240
Query: 485 Q--AIGVNC-VRPSHVSTLVRCIKQSHPTVQTIVYPNKG-----GVWDSVHMKWLDTEDE 536
+ A+G+NC + + V+ + T+ + YPN G G +D +T +E
Sbjct: 241 KPIAVGLNCALGAKDMRQFVQNMSLWSDTL-ILCYPNAGLPNALGGYD-------ETPEE 292
Query: 537 YSILHYVPQWLEEG-VNIIGGCCEVTSYEIQQM 568
+ + ++ ++G VNIIGGCC T I M
Sbjct: 293 MA--EVLREFAQDGLVNIIGGCCGTTPDHINAM 323
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 111/284 (39%), Gaps = 45/284 (15%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD---------GHPLWSSVYL--TTEPEACVETHRDFIRA 54
++ ++DG+ + + R +++ D PL + L T P+ + H+ ++ A
Sbjct: 17 RIMIIDGAMGTMIQREYMEEHDFRGEILKDHDKPLKGNNDLLSITRPDIIYKIHKLYLEA 76
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLH----KSVQLMNSAKDKENQTPDINLNKT 110
GAD I+++ + T + ++ L+H +S + A D I
Sbjct: 77 GADFIETNTFSG-----TTIAQADYHCEHLVHEINYQSALVARRACDDVGAATGIRRY-- 129
Query: 111 FNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 170
+IGP L ++T +L+ + +L++ GVD L
Sbjct: 130 ---------VCGAIGPTNRTLSISPSVEKPDFRNVTFQELVKAYGDQARSLIQGGVDVLL 180
Query: 171 LETI---PAEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN 224
+ET+ K AL ++ L E P +LS + D G +S L +
Sbjct: 181 VETVFDSANAKAALFAIRTLFEDEGVPEIPVFLSGTIVD----MSGRTLSGQTGEAFLVS 236
Query: 225 PDQIQ--AIGVNC-VRPSHVSTLVRCIKQSHPTVQTIVYPNKGV 265
Q + A+G+NC + + V+ + T+ + YPN G+
Sbjct: 237 TKQGKPIAVGLNCALGAKDMRQFVQNMSLWSDTL-ILCYPNAGL 279
>sp|O09171|BHMT1_RAT Betaine--homocysteine S-methyltransferase 1 OS=Rattus norvegicus
GN=Bhmt PE=1 SV=1
Length = 407
Score = 40.0 bits (92), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 30/184 (16%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V + DG F + + V P W+ PEA + HR+F+RAG++++Q+ +
Sbjct: 21 EVVIGDGGFVFALEKRGY--VKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFY 77
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAK-DKENQTPDINLNKTFNLLTGHIETAASI 124
A+ D L G E + S Q +N A D Q D + L+ G + S
Sbjct: 78 ASEDKLENRGNYVAEKI-----SGQKVNEAACDIARQVAD----EGDALVAGGVSQTPS- 127
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 184
Y+ +E ++ +E ++ VD+L E +EA+ V
Sbjct: 128 ----------------YLSCKSETEVKKIFHQQLEVFMKKNVDFLIAEYFEHVEEAVWAV 171
Query: 185 KLLR 188
+ L+
Sbjct: 172 EALK 175
Score = 33.5 bits (75), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 113/327 (34%), Gaps = 61/327 (18%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V + DG F + + V P W+ PEA + HR+F+R + Y
Sbjct: 22 VVIGDGGFVFALEKRGY--VKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYA 78
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYG 384
+ D E G+YV A+ I+ + N A I+ Q A
Sbjct: 79 S--EDKLENRGNYV-----AEKISGQKVNEAAC-------------DIARQVADE---GD 115
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLR 444
++ G + Y+ +E ++ +E ++ VD+L E +EA+ V+ L+
Sbjct: 116 ALVAGGVSQTPSYLSCKSETEVKKIFHQQLEVFMKKNVDFLIAEYFEHVEEAVWAVEALK 175
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVSTLVRC 503
K + C HG +S + L +GVNC PS ++
Sbjct: 176 T--SGKPIAATMCIGPEGDLHG--VSPGECAVRLVKAGAA-IVGVNCHFDPSTSLQTIKL 230
Query: 504 IKQSHPTVQTIVY----------PNKG------------GVWDSVHMKWLDTEDEYSILH 541
+K+ + Y P+ G G+ V +W I
Sbjct: 231 MKEGLEAARLKAYLMSHALAYHTPDCGKQGFIDLPEFPFGLEPRVATRW-------DIQK 283
Query: 542 YVPQWLEEGVNIIGGCCEVTSYEIQQM 568
Y + GV IGGCC Y I+ +
Sbjct: 284 YAREAYNLGVRYIGGCCGFEPYHIRAI 310
>sp|Q5RFG2|BHMT1_PONAB Betaine--homocysteine S-methyltransferase 1 OS=Pongo abelii
GN=BHMT PE=2 SV=1
Length = 406
Score = 39.7 bits (91), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 11 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDN 70
DG F + + V P W+ PEA + HR+F+RAG++++Q+ + A+ D
Sbjct: 26 DGGFVFALEKRGY--VKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDK 82
Query: 71 LTKLG 75
L G
Sbjct: 83 LENRG 87
Score = 33.1 bits (74), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 109/316 (34%), Gaps = 47/316 (14%)
Query: 269 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLR 328
DG F + + V P W+ PEA + HR+F+R + Y +
Sbjct: 26 DGGFVFALEKRGY--VKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYAS--E 80
Query: 329 DGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLR 388
D E G+YV + I+ + N A I+ Q A ++
Sbjct: 81 DKLENRGNYV-----LEKISGQKVNEAAC-------------DIARQVADE---GDALVA 119
Query: 389 DGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPG 448
G + Y+ +E ++ +E ++ VD+L E +EA+ V+ L
Sbjct: 120 GGVSQTPSYLSCKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETL--IAS 177
Query: 449 QKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVSTLVRCIKQ- 506
K + C HG + A IGVNC P+ V+ +K+
Sbjct: 178 GKPVAATMCIGPEGDLHGVPPGECAVRLVKAG---ASIIGVNCHFDPTISLKTVKLMKEG 234
Query: 507 -------SHPTVQTIVY--P--NKGGVWDSVHMKW---LDTEDEYSILHYVPQWLEEGVN 552
+H Q + Y P NK G D + + I Y + G+
Sbjct: 235 LEAARLKAHLMSQPLAYHTPDCNKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNMGIR 294
Query: 553 IIGGCCEVTSYEIQQM 568
IGGCC Y I+ +
Sbjct: 295 YIGGCCGFEPYHIRAI 310
>sp|Q93088|BHMT1_HUMAN Betaine--homocysteine S-methyltransferase 1 OS=Homo sapiens
GN=BHMT PE=1 SV=2
Length = 406
Score = 39.7 bits (91), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 11 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDN 70
DG F + + V P W+ PEA + HR+F+RAG++++Q+ + A+ D
Sbjct: 26 DGGFVFALEKRGY--VKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDK 82
Query: 71 LTKLG 75
L G
Sbjct: 83 LENRG 87
Score = 32.7 bits (73), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 109/324 (33%), Gaps = 63/324 (19%)
Query: 269 DGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLR 328
DG F + + V P W+ PEA + HR+F+R + Y +
Sbjct: 26 DGGFVFALEKRGY--VKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYAS--E 80
Query: 329 DGSEYSGHYV------DSMTEA--DLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASI 380
D E G+YV + EA D+ +ALV GV SQT +
Sbjct: 81 DKLENRGNYVLEKISGQEVNEAACDIARQVADEGDALVAGGV-----------SQTPS-- 127
Query: 381 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALV 440
Y+ +E ++ +E ++ VD+L E +EA+ V
Sbjct: 128 ----------------YLSCKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAV 171
Query: 441 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVST 499
+ L K + C HG + A IGVNC P+
Sbjct: 172 ETL--IASGKPVAATMCIGPEGDLHGVPPGECAVRLVKAG---ASIIGVNCHFDPTISLK 226
Query: 500 LVRCIKQ--------SHPTVQTIVYP----NKGGVWDSVHMKW---LDTEDEYSILHYVP 544
V+ +K+ +H Q + Y NK G D + + I Y
Sbjct: 227 TVKLMKEGLEAARLKAHLMSQPLAYHTPDCNKQGFIDLPEFPFGLEPRVATRWDIQKYAR 286
Query: 545 QWLEEGVNIIGGCCEVTSYEIQQM 568
+ GV IGGCC Y I+ +
Sbjct: 287 EAYNLGVRYIGGCCGFEPYHIRAI 310
>sp|Q32LQ4|BHMT1_DANRE Betaine--homocysteine S-methyltransferase 1 OS=Danio rerio GN=bhmt
PE=2 SV=1
Length = 400
Score = 39.3 bits (90), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 92/244 (37%), Gaps = 40/244 (16%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V + DG F + + V P W+ PEA + HR+F+RAG++++Q+ +
Sbjct: 18 EVVIGDGGFVFALEKRGY--VKAGP-WTPEAAAEHPEAVRQLHREFLRAGSNVMQTFTFY 74
Query: 66 ANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIG 125
A+ D L E L Q+ +A D + N+ L+ G + S
Sbjct: 75 ASDDKL------ENRGNKLSFTGQQINEAACDLAREV----ANEGDALVAGGVSQTPS-- 122
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVK 185
Y+ +E ++ + ++ ++ VD L E +EA V+
Sbjct: 123 ---------------YLSCKSEEEVKKTFKKQLDVFIKKNVDLLIAEYFEHVEEAEWAVQ 167
Query: 186 LLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLV 245
+L+ K + C HG + + A D +GVNC H L
Sbjct: 168 VLKAT--GKPVAATLCIGPDGDMHGVIPGECAVRLVKAGAD---IVGVNC----HFDPLT 218
Query: 246 RCIK 249
C+K
Sbjct: 219 -CVK 221
>sp|Q91WS4|BHMT2_MOUSE S-methylmethionine--homocysteine S-methyltransferase BHMT2 OS=Mus
musculus GN=Bhmt2 PE=1 SV=2
Length = 363
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 31 LWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLT 72
LW+ + P A + H +F+RAGAD++Q+ + A DN+
Sbjct: 43 LWTPEAVVEHPSAVRQLHTEFLRAGADVLQTFTFSATEDNMA 84
>sp|Q5RF32|BHMT2_PONAB S-methylmethionine--homocysteine S-methyltransferase BHMT2
OS=Pongo abelii GN=BHMT2 PE=2 SV=1
Length = 363
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V + DGSF + + LW+ + P+A + H +F+RAG++++Q+ +
Sbjct: 21 EVVIGDGSFLITLEKRGYVKAG---LWTPEAVIEHPDAVRQLHMEFLRAGSNVMQTFTFS 77
Query: 66 ANVDNL 71
A+ DN+
Sbjct: 78 ASEDNM 83
>sp|Q9H2M3|BHMT2_HUMAN S-methylmethionine--homocysteine S-methyltransferase BHMT2
OS=Homo sapiens GN=BHMT2 PE=1 SV=1
Length = 363
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V + DGSF + + LW+ + P+A + H +F+RAG++++Q+ +
Sbjct: 21 EVVIGDGSFLITLEKRGYVKAG---LWTPEAVIEHPDAVRQLHMEFLRAGSNVMQTFTFS 77
Query: 66 ANVDNL 71
A+ DN+
Sbjct: 78 ASEDNM 83
>sp|Q68FT5|BHMT2_RAT S-methylmethionine--homocysteine S-methyltransferase BHMT2
OS=Rattus norvegicus GN=Bhmt2 PE=2 SV=1
Length = 363
Score = 36.6 bits (83), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQ 65
+V + DG F + + LW+ + P A + H +F+RAGAD++Q+ +
Sbjct: 21 EVVVGDGGFLFTLEKRGFVKAG---LWTPEAVVEYPSAVRQLHTEFLRAGADVLQTFTFS 77
Query: 66 ANVDNL 71
A D +
Sbjct: 78 AAEDRM 83
>sp|B2TW57|NUON_SHIB3 NADH-quinone oxidoreductase subunit N OS=Shigella boydii serotype
18 (strain CDC 3083-94 / BS512) GN=nuoN PE=3 SV=1
Length = 485
Score = 36.2 bits (82), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 13/125 (10%)
Query: 52 IRAGADIIQSSCYQANVDNLTKL-GYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKT 110
I A A II + + N+ +L GYS L L ++ + QT ++++
Sbjct: 275 IIAFASIIFGNLMALSQTNIKRLLGYSSISHLGYLLVALIAL--------QTGEMSMEAV 326
Query: 111 FNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 170
L G++ + S+G +G V S Y G DS+ + WHRP + A++ V L+
Sbjct: 327 GGYLAGYLFS--SLGAFGVVSLMSSPYRGPDADSLFSYRGLFWHRPILAAVMT--VMMLS 382
Query: 171 LETIP 175
L IP
Sbjct: 383 LAGIP 387
>sp|Q9KUW9|METH_VIBCH Methionine synthase OS=Vibrio cholerae serotype O1 (strain ATCC
39315 / El Tor Inaba N16961) GN=metH PE=3 SV=1
Length = 1226
Score = 36.2 bits (82), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 81/224 (36%), Gaps = 30/224 (13%)
Query: 357 LVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEA 416
L R D PS A +GP + + ++T L+ + + A
Sbjct: 111 LAREVADEWTAKDPSRPRYVAGVLGPTNRTCSISPDVNDPGFRNVTFDGLVEAYSESTRA 170
Query: 417 LVRAGVDYLALETI----PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSA 472
L++ G D + +ETI A+ A A+ + E L + G +S
Sbjct: 171 LIKGGSDLILIETIFDTLNAKACAFAVDSVFEEL---GISLPVMISGTITDASGRTLSGQ 227
Query: 473 VTSCLLANPDQIQAI--GVNCVRP--------SHVSTLVRCIKQSHPTVQTIVYPNKGGV 522
T ++ I G+NC +S + C +HP PN G
Sbjct: 228 TTEAFYNALRHVRPISFGLNCALGPDELRQYVEELSRISECYVSAHPNAG---LPNAFGE 284
Query: 523 WDSVHMKWLDTEDEYSILHYVPQWLEEG-VNIIGGCCEVTSYEI 565
+D L E+ + ++ +W + G +N++GGCC T I
Sbjct: 285 YD------LSAEE---MAEHIAEWAQAGFLNLVGGCCGTTPEHI 319
>sp|O06745|YITJ_BACSU Bifunctional homocysteine
S-methyltransferase/5,10-methylenetetrahydrofolate
reductase OS=Bacillus subtilis (strain 168) GN=yitJ PE=2
SV=1
Length = 612
Score = 36.2 bits (82), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 16/164 (9%)
Query: 411 RPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELIS 470
R + L+ D L LET +EA ++K+ R+ L+ S + G +S
Sbjct: 123 REQLYLLLHEEPDGLLLETYYDLEEAREVLKIARKETDLPIMLNVSMHEQGVLQDGTPLS 182
Query: 471 SAVTSCLLANPDQIQAIGVNC-VRPSHVSTLVRCIKQSHPTVQTI---VYPNKGGVWDSV 526
A+ S D +G+NC + P H ++ + + P + VYPN S+
Sbjct: 183 DALRSIADLGAD---IVGINCRLGPYH---MIEALSEV-PIFDDVFLSVYPNSS--LPSL 233
Query: 527 HMKWL--DTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQM 568
L +T+D Y + ++ ++G IIGGCC T I+ M
Sbjct: 234 EEGRLVYETDDTY-FQNSASEFRKQGARIIGGCCGTTPNHIRAM 276
Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 39 TEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSE------QEALDLLHKS 88
++PE H+ ++ AGA+IIQ++ Y AN L++ G + QEA+ + S
Sbjct: 37 SKPEEIQRIHKAYVEAGANIIQTNTYGANYIKLSRHGLEDDIKKMNQEAVKIARAS 92
>sp|B7MXV5|NUON_ECO81 NADH-quinone oxidoreductase subunit N OS=Escherichia coli O81
(strain ED1a) GN=nuoN PE=3 SV=1
Length = 485
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 13/125 (10%)
Query: 52 IRAGADIIQSSCYQANVDNLTKL-GYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKT 110
I A A II + + N+ +L GYS L L ++ + QT ++++
Sbjct: 275 IIAFASIIFGNLMALSQTNIKRLLGYSSISHLGYLLVALIAL--------QTGEMSMEAV 326
Query: 111 FNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 170
L G++ + S+G +G V S Y G DS+ + WHRP + A++ V L+
Sbjct: 327 GVYLVGYLFS--SLGAFGVVSLMSSPYRGPDADSLFSYRGLFWHRPILAAVMT--VMMLS 382
Query: 171 LETIP 175
L IP
Sbjct: 383 LAGIP 387
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 223,068,715
Number of Sequences: 539616
Number of extensions: 9225994
Number of successful extensions: 24293
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 23972
Number of HSP's gapped (non-prelim): 236
length of query: 581
length of database: 191,569,459
effective HSP length: 123
effective length of query: 458
effective length of database: 125,196,691
effective search space: 57340084478
effective search space used: 57340084478
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)