Query psy15811
Match_columns 581
No_of_seqs 236 out of 2151
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 21:57:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15811.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15811hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1lt8_A Betaine-homocysteine me 100.0 6.7E-56 2.3E-60 470.5 19.9 274 265-578 22-320 (406)
2 1lt8_A Betaine-homocysteine me 100.0 4E-55 1.4E-59 464.6 21.4 260 6-308 21-313 (406)
3 1q7z_A 5-methyltetrahydrofolat 100.0 1.8E-54 6.3E-59 479.4 24.3 272 264-579 14-294 (566)
4 1q7z_A 5-methyltetrahydrofolat 100.0 4.1E-54 1.4E-58 476.6 27.0 258 5-307 13-285 (566)
5 2ojp_A DHDPS, dihydrodipicolin 93.8 0.59 2E-05 46.9 12.9 106 143-262 17-135 (292)
6 3cpr_A Dihydrodipicolinate syn 93.6 0.56 1.9E-05 47.4 12.3 106 143-262 32-150 (304)
7 1xky_A Dihydrodipicolinate syn 93.5 0.57 1.9E-05 47.3 12.2 105 144-262 29-146 (301)
8 3fkr_A L-2-keto-3-deoxyarabona 93.2 0.55 1.9E-05 47.7 11.4 105 143-261 24-144 (309)
9 2ehh_A DHDPS, dihydrodipicolin 93.1 0.66 2.3E-05 46.6 11.8 105 144-262 17-134 (294)
10 1o5k_A DHDPS, dihydrodipicolin 93.0 0.57 2E-05 47.4 11.3 105 144-262 29-146 (306)
11 2vc6_A MOSA, dihydrodipicolina 92.9 0.48 1.6E-05 47.6 10.5 105 144-262 17-134 (292)
12 2r8w_A AGR_C_1641P; APC7498, d 92.7 0.69 2.4E-05 47.4 11.4 106 143-262 50-168 (332)
13 2yxg_A DHDPS, dihydrodipicolin 92.5 0.76 2.6E-05 46.0 11.3 105 144-262 17-134 (289)
14 3igs_A N-acetylmannosamine-6-p 92.5 1.4 4.7E-05 42.7 12.8 66 154-235 90-157 (232)
15 2v9d_A YAGE; dihydrodipicolini 92.2 0.7 2.4E-05 47.6 10.8 106 143-262 47-165 (343)
16 3m5v_A DHDPS, dihydrodipicolin 92.1 0.95 3.2E-05 45.6 11.5 104 144-261 24-141 (301)
17 3a5f_A Dihydrodipicolinate syn 92.1 0.58 2E-05 47.0 9.8 104 145-262 19-135 (291)
18 3flu_A DHDPS, dihydrodipicolin 92.0 1.2 4.1E-05 44.8 12.1 118 119-262 11-141 (297)
19 2rfg_A Dihydrodipicolinate syn 92.0 0.71 2.4E-05 46.5 10.4 105 144-262 17-134 (297)
20 3na8_A Putative dihydrodipicol 91.9 0.9 3.1E-05 46.2 11.1 118 119-262 28-158 (315)
21 2wkj_A N-acetylneuraminate lya 91.9 0.78 2.7E-05 46.3 10.6 118 119-262 15-146 (303)
22 3b4u_A Dihydrodipicolinate syn 91.8 1.2 4.1E-05 44.7 11.8 106 143-262 19-141 (294)
23 1f6k_A N-acetylneuraminate lya 91.6 0.93 3.2E-05 45.5 10.7 106 143-262 19-138 (293)
24 3qze_A DHDPS, dihydrodipicolin 91.5 1.1 3.8E-05 45.4 11.3 106 143-262 39-157 (314)
25 3d0c_A Dihydrodipicolinate syn 91.3 1 3.6E-05 45.6 10.9 108 143-265 28-148 (314)
26 3q58_A N-acetylmannosamine-6-p 91.1 2.3 7.7E-05 41.1 12.6 66 154-235 90-157 (229)
27 2nuw_A 2-keto-3-deoxygluconate 91.1 2.3 7.9E-05 42.5 13.0 105 143-262 15-131 (288)
28 3fkr_A L-2-keto-3-deoxyarabona 91.0 4.4 0.00015 40.8 15.1 146 400-572 25-188 (309)
29 3s5o_A 4-hydroxy-2-oxoglutarat 90.9 1.4 4.8E-05 44.5 11.3 106 143-262 30-150 (307)
30 3cpr_A Dihydrodipicolinate syn 90.7 1.9 6.4E-05 43.5 12.0 106 400-519 33-151 (304)
31 3l21_A DHDPS, dihydrodipicolin 90.6 1.5 5.1E-05 44.3 11.2 118 119-262 19-149 (304)
32 3tak_A DHDPS, dihydrodipicolin 90.6 1.6 5.4E-05 43.7 11.3 106 143-262 17-135 (291)
33 2ojp_A DHDPS, dihydrodipicolin 90.4 2.2 7.4E-05 42.8 12.1 105 400-518 18-135 (292)
34 3si9_A DHDPS, dihydrodipicolin 90.3 1.3 4.4E-05 45.0 10.4 105 143-262 38-156 (315)
35 1w3i_A EDA, 2-keto-3-deoxy glu 90.3 3.2 0.00011 41.5 13.3 104 144-262 16-131 (293)
36 1xky_A Dihydrodipicolinate syn 90.2 2 6.7E-05 43.3 11.6 106 400-519 29-147 (301)
37 3e96_A Dihydrodipicolinate syn 90.0 0.96 3.3E-05 46.0 9.2 104 144-262 29-145 (316)
38 2r91_A 2-keto-3-deoxy-(6-phosp 89.9 2.5 8.6E-05 42.1 12.0 104 144-262 15-130 (286)
39 3vnd_A TSA, tryptophan synthas 89.8 2.2 7.6E-05 42.2 11.4 174 31-259 19-211 (267)
40 3qfe_A Putative dihydrodipicol 89.6 1.9 6.5E-05 43.8 11.1 105 144-262 28-147 (318)
41 2ehh_A DHDPS, dihydrodipicolin 89.6 2.4 8.1E-05 42.5 11.6 101 409-519 22-135 (294)
42 3i4e_A Isocitrate lyase; struc 89.3 4.4 0.00015 42.8 13.6 138 410-555 169-350 (439)
43 2qjg_A Putative aldolase MJ040 89.2 8.1 0.00028 37.7 15.2 120 412-552 103-232 (273)
44 1o5k_A DHDPS, dihydrodipicolin 89.2 2.1 7.1E-05 43.3 10.9 105 401-519 30-147 (306)
45 2vc6_A MOSA, dihydrodipicolina 89.1 1.8 6.2E-05 43.3 10.4 101 409-519 22-135 (292)
46 3dz1_A Dihydrodipicolinate syn 89.0 1.9 6.5E-05 43.6 10.5 119 118-262 11-142 (313)
47 3lg3_A Isocitrate lyase; conse 88.8 2.8 9.7E-05 44.1 11.7 138 411-556 170-351 (435)
48 3daq_A DHDPS, dihydrodipicolin 88.8 2.2 7.6E-05 42.7 10.7 101 152-262 23-136 (292)
49 3r89_A Orotidine 5'-phosphate 88.6 1.7 5.8E-05 43.6 9.6 160 402-573 41-218 (290)
50 3eol_A Isocitrate lyase; seatt 88.6 4.2 0.00014 42.8 12.9 137 411-555 163-345 (433)
51 2yxg_A DHDPS, dihydrodipicolin 88.4 2.7 9.2E-05 42.0 11.0 105 401-519 18-135 (289)
52 2r8w_A AGR_C_1641P; APC7498, d 88.3 2.5 8.6E-05 43.2 10.9 106 400-519 51-169 (332)
53 3nav_A Tryptophan synthase alp 88.3 11 0.00037 37.3 15.2 172 32-259 22-213 (271)
54 3b4u_A Dihydrodipicolinate syn 88.2 5 0.00017 40.1 12.9 107 400-519 20-142 (294)
55 2hmc_A AGR_L_411P, dihydrodipi 88.2 2.3 8E-05 43.6 10.6 104 143-261 42-158 (344)
56 3na8_A Putative dihydrodipicol 88.2 2.6 9E-05 42.7 10.9 106 400-519 41-159 (315)
57 3a5f_A Dihydrodipicolinate syn 87.8 2 6.8E-05 43.0 9.6 101 409-519 23-136 (291)
58 3m5v_A DHDPS, dihydrodipicolin 87.7 3.2 0.00011 41.7 11.1 105 401-519 25-143 (301)
59 2rfg_A Dihydrodipicolinate syn 87.6 2.4 8.4E-05 42.5 10.2 101 409-519 22-135 (297)
60 3l21_A DHDPS, dihydrodipicolin 87.6 3 0.0001 42.0 10.8 118 375-518 19-149 (304)
61 2wkj_A N-acetylneuraminate lya 87.5 2.5 8.5E-05 42.6 10.2 107 400-519 28-147 (303)
62 3si9_A DHDPS, dihydrodipicolin 87.3 3.5 0.00012 41.8 11.1 106 400-519 39-157 (315)
63 3eb2_A Putative dihydrodipicol 87.2 1.4 4.8E-05 44.4 8.1 118 119-262 8-138 (300)
64 3qze_A DHDPS, dihydrodipicolin 87.2 3.2 0.00011 42.0 10.9 105 400-518 40-157 (314)
65 2v9d_A YAGE; dihydrodipicolini 87.2 2.4 8.3E-05 43.5 10.0 106 400-519 48-166 (343)
66 3flu_A DHDPS, dihydrodipicolin 87.1 4.2 0.00014 40.7 11.6 106 400-519 24-142 (297)
67 1l6s_A Porphobilinogen synthas 87.1 11 0.00039 37.7 14.2 185 349-554 97-308 (323)
68 3d0c_A Dihydrodipicolinate syn 86.9 3.5 0.00012 41.7 11.0 107 400-521 29-148 (314)
69 1h7n_A 5-aminolaevulinic acid 86.7 29 0.00099 35.1 16.9 188 349-555 111-327 (342)
70 3e96_A Dihydrodipicolinate syn 86.6 2.4 8.4E-05 42.9 9.5 104 400-518 29-145 (316)
71 1f6k_A N-acetylneuraminate lya 86.5 3.2 0.00011 41.6 10.2 106 400-519 20-139 (293)
72 2nuw_A 2-keto-3-deoxygluconate 86.2 8.7 0.0003 38.2 13.3 105 400-519 16-132 (288)
73 3s5o_A 4-hydroxy-2-oxoglutarat 85.7 4.7 0.00016 40.6 11.1 106 400-519 31-151 (307)
74 3dz1_A Dihydrodipicolinate syn 85.6 3.9 0.00013 41.3 10.5 107 400-519 25-143 (313)
75 3h5d_A DHDPS, dihydrodipicolin 85.5 4.4 0.00015 40.9 10.8 118 119-262 11-142 (311)
76 2r91_A 2-keto-3-deoxy-(6-phosp 85.3 6.1 0.00021 39.3 11.6 104 401-519 16-131 (286)
77 1w3i_A EDA, 2-keto-3-deoxy glu 85.2 11 0.00037 37.6 13.4 105 400-519 16-132 (293)
78 3tak_A DHDPS, dihydrodipicolin 85.1 4.2 0.00014 40.6 10.3 105 400-518 18-135 (291)
79 1w1z_A Delta-aminolevulinic ac 84.9 14 0.00048 37.0 13.6 185 349-554 103-315 (328)
80 1nvm_A HOA, 4-hydroxy-2-oxoval 84.6 15 0.00052 37.4 14.6 98 158-262 99-202 (345)
81 3daq_A DHDPS, dihydrodipicolin 84.4 4 0.00014 40.8 9.8 102 408-519 23-137 (292)
82 2eja_A URO-D, UPD, uroporphyri 84.1 16 0.00055 36.9 14.5 139 406-576 177-336 (338)
83 4dpp_A DHDPS 2, dihydrodipicol 84.0 4.5 0.00015 41.8 10.1 115 119-261 63-190 (360)
84 3qfe_A Putative dihydrodipicol 83.5 6 0.0002 40.1 10.7 103 408-520 32-149 (318)
85 3inp_A D-ribulose-phosphate 3- 83.5 11 0.00037 36.8 12.1 86 411-508 43-134 (246)
86 2hmc_A AGR_L_411P, dihydrodipi 83.3 6.5 0.00022 40.3 11.0 105 400-519 43-160 (344)
87 2e6f_A Dihydroorotate dehydrog 83.3 5.2 0.00018 40.1 10.2 118 414-554 31-192 (314)
88 2nx9_A Oxaloacetate decarboxyl 83.2 7.6 0.00026 41.5 11.8 101 155-261 103-208 (464)
89 1tqj_A Ribulose-phosphate 3-ep 82.9 6.1 0.00021 37.9 10.1 49 411-459 20-73 (230)
90 2qjg_A Putative aldolase MJ040 82.5 6.2 0.00021 38.6 10.2 94 157-260 104-208 (273)
91 1zlp_A PSR132, petal death pro 82.1 1.4 4.9E-05 44.7 5.4 45 152-200 189-233 (318)
92 3eoo_A Methylisocitrate lyase; 82.0 1.2 4.2E-05 44.8 4.8 46 151-200 170-215 (298)
93 1qop_A Tryptophan synthase alp 81.8 14 0.00048 36.2 12.5 92 410-508 33-147 (268)
94 1to3_A Putative aldolase YIHT; 81.3 17 0.00058 36.5 13.0 96 158-256 114-223 (304)
95 1jub_A Dihydroorotate dehydrog 81.2 4.4 0.00015 40.6 8.8 95 158-262 29-166 (311)
96 3f4w_A Putative hexulose 6 pho 81.2 12 0.00041 34.8 11.3 90 157-258 69-163 (211)
97 1xg4_A Probable methylisocitra 81.0 1.5 5E-05 44.2 4.9 45 152-200 167-211 (295)
98 1jub_A Dihydroorotate dehydrog 80.6 9.1 0.00031 38.2 10.8 120 412-554 27-189 (311)
99 1f8m_A Isocitrate lyase, ICL; 80.5 21 0.00071 37.6 13.7 137 410-554 165-345 (429)
100 4dpp_A DHDPS 2, dihydrodipicol 80.3 11 0.00039 38.7 11.5 117 375-519 63-192 (360)
101 3h5d_A DHDPS, dihydrodipicolin 80.0 8.1 0.00028 39.0 10.2 101 409-519 29-143 (311)
102 3o1n_A 3-dehydroquinate dehydr 79.7 16 0.00055 36.1 12.0 102 153-260 120-227 (276)
103 3gr7_A NADPH dehydrogenase; fl 79.7 38 0.0013 34.3 15.3 115 142-259 131-282 (340)
104 3noy_A 4-hydroxy-3-methylbut-2 79.6 8.8 0.0003 39.3 10.1 123 152-312 46-171 (366)
105 4ay7_A Methylcobalamin\: coenz 79.6 34 0.0011 34.7 14.9 85 157-251 254-346 (348)
106 2ftp_A Hydroxymethylglutaryl-C 79.2 13 0.00046 37.0 11.5 104 412-520 87-215 (302)
107 3obk_A Delta-aminolevulinic ac 78.8 42 0.0014 34.0 14.5 188 349-555 114-330 (356)
108 4ef8_A Dihydroorotate dehydrog 78.8 3.5 0.00012 42.5 7.1 62 190-261 124-200 (354)
109 3ih1_A Methylisocitrate lyase; 78.7 1.3 4.5E-05 44.7 3.8 44 152-199 175-218 (305)
110 1rqb_A Transcarboxylase 5S sub 78.5 11 0.00037 41.0 11.1 102 156-262 121-228 (539)
111 3noy_A 4-hydroxy-3-methylbut-2 78.4 6.7 0.00023 40.2 8.8 135 409-562 47-189 (366)
112 1zlp_A PSR132, petal death pro 78.3 2.1 7.3E-05 43.4 5.2 46 407-456 188-233 (318)
113 3fa4_A 2,3-dimethylmalate lyas 77.9 12 0.00041 37.6 10.5 96 412-515 99-212 (302)
114 4fxs_A Inosine-5'-monophosphat 77.8 13 0.00044 40.1 11.5 65 155-233 233-299 (496)
115 3lye_A Oxaloacetate acetyl hyd 77.8 3.3 0.00011 41.8 6.4 45 153-200 179-223 (307)
116 1s2w_A Phosphoenolpyruvate pho 77.6 2.5 8.4E-05 42.5 5.4 44 153-198 171-215 (295)
117 1to3_A Putative aldolase YIHT; 77.3 19 0.00065 36.1 11.9 46 152-197 177-227 (304)
118 3lye_A Oxaloacetate acetyl hyd 77.2 15 0.00052 36.9 11.1 89 412-505 107-214 (307)
119 4h3d_A 3-dehydroquinate dehydr 76.7 28 0.00095 34.0 12.7 101 154-260 101-207 (258)
120 2e6f_A Dihydroorotate dehydrog 76.4 4.5 0.00016 40.5 7.1 93 159-261 32-167 (314)
121 1ydn_A Hydroxymethylglutaryl-C 76.3 11 0.00037 37.5 9.8 100 157-261 84-206 (295)
122 3usb_A Inosine-5'-monophosphat 76.2 4.8 0.00016 43.6 7.6 64 158-235 311-389 (511)
123 4avf_A Inosine-5'-monophosphat 76.2 15 0.00052 39.4 11.5 66 154-233 230-297 (490)
124 3txv_A Probable tagatose 6-pho 75.9 54 0.0018 34.6 15.1 36 166-203 21-56 (450)
125 1pv8_A Delta-aminolevulinic ac 75.7 18 0.00063 36.3 10.9 187 349-554 100-315 (330)
126 3o1n_A 3-dehydroquinate dehydr 75.4 8.6 0.00029 38.1 8.6 105 409-519 120-230 (276)
127 1oy0_A Ketopantoate hydroxymet 75.4 28 0.00095 34.5 12.2 100 408-516 113-220 (281)
128 3b0p_A TRNA-dihydrouridine syn 75.3 17 0.00057 37.2 11.1 114 420-554 27-161 (350)
129 1ydn_A Hydroxymethylglutaryl-C 74.8 12 0.00042 37.1 9.7 104 412-520 83-211 (295)
130 3cyv_A URO-D, UPD, uroporphyri 74.7 14 0.00048 37.6 10.4 145 404-577 183-350 (354)
131 3ovp_A Ribulose-phosphate 3-ep 74.7 18 0.00062 34.6 10.5 86 411-508 20-112 (228)
132 1xg4_A Probable methylisocitra 74.6 2.7 9.2E-05 42.3 4.7 45 408-456 167-211 (295)
133 1z41_A YQJM, probable NADH-dep 74.2 41 0.0014 33.9 13.7 113 400-515 133-282 (338)
134 1rpx_A Protein (ribulose-phosp 73.9 22 0.00075 33.6 11.0 85 411-507 26-117 (230)
135 2ekc_A AQ_1548, tryptophan syn 73.8 25 0.00084 34.3 11.5 93 155-259 112-211 (262)
136 2qiw_A PEP phosphonomutase; st 73.7 19 0.00066 35.1 10.5 140 411-573 96-248 (255)
137 4fo4_A Inosine 5'-monophosphat 73.3 21 0.0007 36.9 11.2 66 154-233 109-176 (366)
138 4fxs_A Inosine-5'-monophosphat 73.3 9.1 0.00031 41.2 8.8 65 157-235 285-364 (496)
139 3eoo_A Methylisocitrate lyase; 73.2 3.1 0.0001 41.9 4.7 46 407-456 170-215 (298)
140 3hgj_A Chromate reductase; TIM 73.1 22 0.00077 36.2 11.4 114 143-259 140-293 (349)
141 2hjp_A Phosphonopyruvate hydro 73.1 2.8 9.6E-05 42.0 4.4 43 154-198 168-211 (290)
142 1s2w_A Phosphoenolpyruvate pho 73.1 3.8 0.00013 41.2 5.3 45 408-454 170-215 (295)
143 1z41_A YQJM, probable NADH-dep 72.8 25 0.00085 35.6 11.6 113 143-258 132-281 (338)
144 1o66_A 3-methyl-2-oxobutanoate 72.8 69 0.0023 31.6 14.2 92 416-516 103-202 (275)
145 2yr1_A 3-dehydroquinate dehydr 72.7 28 0.00097 33.9 11.6 102 153-261 101-207 (257)
146 2nx9_A Oxaloacetate decarboxyl 72.4 30 0.001 36.8 12.5 101 412-518 104-209 (464)
147 3qja_A IGPS, indole-3-glycerol 72.3 24 0.00082 34.7 11.0 86 413-515 127-218 (272)
148 3hgj_A Chromate reductase; TIM 72.2 27 0.00093 35.5 11.8 153 400-573 141-336 (349)
149 1w5q_A Delta-aminolevulinic ac 72.2 86 0.0029 31.6 15.2 185 349-554 107-321 (337)
150 2cw6_A Hydroxymethylglutaryl-C 71.4 35 0.0012 33.8 12.2 99 157-260 85-206 (298)
151 1h1y_A D-ribulose-5-phosphate 71.3 24 0.00081 33.5 10.5 49 411-459 22-75 (228)
152 3f4w_A Putative hexulose 6 pho 71.2 49 0.0017 30.5 12.6 92 414-517 70-166 (211)
153 1sfl_A 3-dehydroquinate dehydr 71.2 32 0.0011 33.1 11.4 103 153-261 84-193 (238)
154 1sfl_A 3-dehydroquinate dehydr 71.1 21 0.00072 34.4 10.1 104 410-519 85-195 (238)
155 2ftp_A Hydroxymethylglutaryl-C 70.9 39 0.0013 33.5 12.4 100 157-261 88-210 (302)
156 1vrd_A Inosine-5'-monophosphat 70.5 29 0.00099 37.0 12.1 68 154-235 238-307 (494)
157 1aj0_A DHPS, dihydropteroate s 70.4 86 0.003 30.9 14.7 170 373-575 14-207 (282)
158 1rqb_A Transcarboxylase 5S sub 70.4 30 0.001 37.6 12.0 102 412-518 121-228 (539)
159 1ydo_A HMG-COA lyase; TIM-barr 70.0 27 0.00092 35.0 11.0 132 49-221 88-224 (307)
160 3ih1_A Methylisocitrate lyase; 69.8 3.2 0.00011 41.9 3.9 45 408-456 175-219 (305)
161 4hb7_A Dihydropteroate synthas 69.5 81 0.0028 31.0 13.9 164 373-568 6-185 (270)
162 4ay7_A Methylcobalamin\: coenz 69.5 60 0.0021 32.7 13.7 42 534-575 301-346 (348)
163 2hjp_A Phosphonopyruvate hydro 69.3 3.6 0.00012 41.2 4.2 45 409-455 167-212 (290)
164 3oix_A Putative dihydroorotate 69.3 11 0.00036 38.7 7.8 62 191-262 127-201 (345)
165 1j93_A UROD, uroporphyrinogen 69.0 58 0.002 32.8 13.5 142 404-575 189-351 (353)
166 2ze3_A DFA0005; organic waste 68.5 6.8 0.00023 38.9 6.0 42 151-196 167-208 (275)
167 2ze3_A DFA0005; organic waste 68.0 7.9 0.00027 38.4 6.3 42 406-451 166-207 (275)
168 1yxy_A Putative N-acetylmannos 67.6 82 0.0028 29.5 15.0 95 411-517 39-140 (234)
169 4e38_A Keto-hydroxyglutarate-a 67.6 42 0.0014 32.2 11.2 102 412-553 97-198 (232)
170 4h3d_A 3-dehydroquinate dehydr 67.5 23 0.00078 34.6 9.6 108 401-518 96-209 (258)
171 2pcq_A Putative dihydrodipicol 67.5 8.8 0.0003 38.1 6.7 101 143-262 14-126 (283)
172 1vzw_A Phosphoribosyl isomeras 67.5 27 0.00093 33.2 10.1 95 156-258 88-194 (244)
173 3eb2_A Putative dihydrodipicol 67.3 1E+02 0.0035 30.5 19.6 152 40-248 23-180 (300)
174 1vhn_A Putative flavin oxidore 66.8 12 0.0004 37.7 7.5 91 163-264 26-136 (318)
175 3b8i_A PA4872 oxaloacetate dec 66.4 4.7 0.00016 40.3 4.3 39 154-196 170-208 (287)
176 3ru6_A Orotidine 5'-phosphate 66.3 46 0.0016 33.3 11.6 102 413-522 95-203 (303)
177 3ewb_X 2-isopropylmalate synth 66.3 1E+02 0.0034 30.5 14.2 66 152-221 150-220 (293)
178 2fiq_A Putative tagatose 6-pho 66.2 65 0.0022 33.7 13.2 172 228-424 14-211 (420)
179 3ffs_A Inosine-5-monophosphate 66.2 22 0.00077 37.1 9.7 66 155-234 146-212 (400)
180 4af0_A Inosine-5'-monophosphat 65.9 15 0.00052 39.8 8.3 45 154-198 282-328 (556)
181 3qja_A IGPS, indole-3-glycerol 65.9 18 0.00063 35.6 8.6 62 157-235 127-190 (272)
182 1f76_A Dihydroorotate dehydrog 65.7 1.1E+02 0.0038 30.4 16.0 124 415-554 72-242 (336)
183 1ydo_A HMG-COA lyase; TIM-barr 65.7 32 0.0011 34.4 10.5 99 158-261 87-208 (307)
184 1ur4_A Galactanase; hydrolase, 65.3 1.3E+02 0.0045 31.1 17.1 109 401-516 130-262 (399)
185 4avf_A Inosine-5'-monophosphat 65.1 14 0.00047 39.7 8.0 65 157-235 283-362 (490)
186 3vnd_A TSA, tryptophan synthas 65.1 1.1E+02 0.0037 29.9 18.6 92 412-515 114-211 (267)
187 1ur4_A Galactanase; hydrolase, 64.7 1.4E+02 0.0046 31.0 15.9 109 145-260 130-262 (399)
188 2yr1_A 3-dehydroquinate dehydr 64.7 19 0.00065 35.2 8.3 108 401-519 97-209 (257)
189 2yw3_A 4-hydroxy-2-oxoglutarat 64.6 41 0.0014 31.5 10.5 123 412-577 74-203 (207)
190 2inf_A URO-D, UPD, uroporphyri 64.6 47 0.0016 33.7 11.8 142 404-576 189-350 (359)
191 3inp_A D-ribulose-phosphate 3- 64.5 11 0.00037 36.8 6.4 99 155-265 43-147 (246)
192 1qop_A Tryptophan synthase alp 64.4 26 0.00088 34.2 9.3 91 154-251 33-146 (268)
193 3r2g_A Inosine 5'-monophosphat 64.3 17 0.00057 37.5 8.2 28 37-64 94-121 (361)
194 2cw6_A Hydroxymethylglutaryl-C 64.2 68 0.0023 31.7 12.6 101 412-517 84-207 (298)
195 2yim_A Probable alpha-methylac 64.1 8.5 0.00029 39.7 5.9 73 34-150 57-129 (360)
196 3fa4_A 2,3-dimethylmalate lyas 64.0 6 0.00021 39.8 4.6 45 152-199 170-214 (302)
197 1q7e_A Hypothetical protein YF 63.8 8.5 0.00029 40.7 5.9 75 35-153 73-147 (428)
198 1w1z_A Delta-aminolevulinic ac 63.7 81 0.0028 31.6 12.5 225 42-317 64-318 (328)
199 3oix_A Putative dihydroorotate 63.7 1.3E+02 0.0045 30.5 16.1 138 408-573 141-323 (345)
200 1vzw_A Phosphoribosyl isomeras 63.7 23 0.00079 33.7 8.7 137 412-571 36-188 (244)
201 3eol_A Isocitrate lyase; seatt 63.6 87 0.003 32.9 13.4 108 154-263 162-315 (433)
202 1eep_A Inosine 5'-monophosphat 63.5 36 0.0012 35.3 10.8 65 155-233 155-221 (404)
203 4ed9_A CAIB/BAIF family protei 63.4 10 0.00036 39.4 6.5 73 35-151 79-151 (385)
204 3gr7_A NADPH dehydrogenase; fl 63.4 57 0.002 33.0 12.0 153 400-573 133-325 (340)
205 4ef8_A Dihydroorotate dehydrog 63.1 21 0.00073 36.6 8.7 82 446-550 124-220 (354)
206 3n3m_A Orotidine 5'-phosphate 62.5 10 0.00035 38.7 6.1 151 412-573 108-276 (342)
207 3fst_A 5,10-methylenetetrahydr 62.4 1.3E+02 0.0044 30.0 18.8 178 372-573 22-228 (304)
208 2pcq_A Putative dihydrodipicol 62.0 12 0.00043 36.9 6.5 101 400-519 15-127 (283)
209 1jcn_A Inosine monophosphate d 61.9 29 0.00099 37.3 10.0 65 157-235 309-388 (514)
210 1w5q_A Delta-aminolevulinic ac 61.8 1.4E+02 0.0047 30.1 14.9 227 42-317 66-324 (337)
211 3ist_A Glutamate racemase; str 61.8 19 0.00066 35.4 7.8 50 400-452 46-95 (269)
212 3ovp_A Ribulose-phosphate 3-ep 61.5 9.3 0.00032 36.7 5.3 98 155-264 20-124 (228)
213 1eye_A DHPS 1, dihydropteroate 61.3 1.2E+02 0.004 29.9 13.4 169 373-572 5-196 (280)
214 3rmj_A 2-isopropylmalate synth 61.2 80 0.0027 32.4 12.7 136 40-221 85-227 (370)
215 1vhn_A Putative flavin oxidore 61.1 51 0.0017 32.9 11.0 91 419-520 26-136 (318)
216 2qv5_A AGR_C_5032P, uncharacte 61.0 48 0.0016 32.4 10.4 151 416-576 49-235 (261)
217 1h7n_A 5-aminolaevulinic acid 60.9 1.4E+02 0.0049 30.0 17.1 227 42-317 69-329 (342)
218 3i4e_A Isocitrate lyase; struc 60.6 1.3E+02 0.0043 31.7 14.0 109 154-264 169-321 (439)
219 1r3s_A URO-D, uroporphyrinogen 60.6 1.5E+02 0.005 30.0 15.5 141 406-575 195-360 (367)
220 1rpx_A Protein (ribulose-phosp 59.9 40 0.0014 31.7 9.6 86 154-251 25-117 (230)
221 1f76_A Dihydroorotate dehydrog 59.7 37 0.0013 34.1 9.8 101 159-262 72-219 (336)
222 3bg3_A Pyruvate carboxylase, m 58.8 56 0.0019 36.7 11.8 105 412-518 201-313 (718)
223 1o66_A 3-methyl-2-oxobutanoate 58.3 1.4E+02 0.0049 29.2 15.1 149 412-573 28-196 (275)
224 2gou_A Oxidoreductase, FMN-bin 58.3 49 0.0017 33.9 10.5 115 400-515 150-298 (365)
225 3k30_A Histamine dehydrogenase 58.3 2.2E+02 0.0076 31.4 16.8 92 142-236 143-265 (690)
226 3ubm_A COAT2, formyl-COA:oxala 57.8 14 0.00047 39.4 6.3 75 35-153 97-171 (456)
227 2ekc_A AQ_1548, tryptophan syn 57.5 47 0.0016 32.3 9.8 91 154-251 33-146 (262)
228 3mcm_A 2-amino-4-hydroxy-6-hyd 57.4 62 0.0021 34.2 11.1 166 372-564 189-377 (442)
229 2gzm_A Glutamate racemase; enz 57.4 79 0.0027 30.6 11.5 151 401-572 45-198 (267)
230 3b8i_A PA4872 oxaloacetate dec 57.4 6.6 0.00023 39.2 3.5 39 410-452 170-208 (287)
231 3uhf_A Glutamate racemase; str 57.2 21 0.00072 35.2 7.2 50 400-452 65-114 (274)
232 3kru_A NADH:flavin oxidoreduct 57.2 1.1E+02 0.0037 31.1 12.7 113 400-516 132-283 (343)
233 2w6r_A Imidazole glycerol phos 57.0 39 0.0013 32.5 9.1 101 412-516 87-206 (266)
234 3usb_A Inosine-5'-monophosphat 56.8 45 0.0015 35.9 10.3 65 155-233 258-324 (511)
235 2qiw_A PEP phosphonomutase; st 56.2 6.9 0.00023 38.4 3.4 42 152-197 168-209 (255)
236 4exq_A UPD, URO-D, uroporphyri 55.9 77 0.0026 32.4 11.6 140 406-575 195-358 (368)
237 3obk_A Delta-aminolevulinic ac 55.8 1.8E+02 0.0061 29.5 15.6 230 42-317 73-332 (356)
238 1rd5_A Tryptophan synthase alp 55.7 91 0.0031 29.9 11.6 46 408-453 32-99 (262)
239 1vhc_A Putative KHG/KDPG aldol 55.6 1.4E+02 0.0048 28.2 12.6 110 412-563 80-192 (224)
240 1pv8_A Delta-aminolevulinic ac 55.5 1.1E+02 0.0036 30.8 11.7 229 42-317 59-318 (330)
241 3out_A Glutamate racemase; str 55.4 14 0.00047 36.4 5.4 50 400-452 48-98 (268)
242 3vav_A 3-methyl-2-oxobutanoate 55.2 14 0.00048 36.6 5.4 45 146-196 168-212 (275)
243 2v82_A 2-dehydro-3-deoxy-6-pho 54.8 1.2E+02 0.0042 27.7 12.0 82 412-515 71-153 (212)
244 1m3u_A 3-methyl-2-oxobutanoate 54.7 1.4E+02 0.0049 29.1 12.6 148 412-573 28-196 (264)
245 4ab4_A Xenobiotic reductase B; 54.6 1.1E+02 0.0039 31.2 12.5 76 152-243 242-320 (362)
246 3tsm_A IGPS, indole-3-glycerol 54.2 51 0.0018 32.4 9.4 64 157-236 134-198 (272)
247 4gj1_A 1-(5-phosphoribosyl)-5- 54.1 74 0.0025 30.5 10.4 97 156-260 88-202 (243)
248 2ztj_A Homocitrate synthase; ( 53.6 2E+02 0.0068 29.4 15.1 127 49-221 81-212 (382)
249 1vyr_A Pentaerythritol tetrani 53.3 80 0.0027 32.3 11.1 113 402-515 155-299 (364)
250 3ble_A Citramalate synthase fr 53.2 1.1E+02 0.0037 30.9 12.0 65 151-221 168-236 (337)
251 1f8m_A Isocitrate lyase, ICL; 53.2 14 0.00047 38.9 5.2 34 155-189 270-304 (429)
252 3khj_A Inosine-5-monophosphate 53.0 98 0.0034 31.6 11.7 65 155-233 107-172 (361)
253 1tqx_A D-ribulose-5-phosphate 52.8 88 0.003 29.7 10.6 50 412-461 22-77 (227)
254 2qf7_A Pyruvate carboxylase pr 52.8 49 0.0017 39.5 10.5 102 413-518 650-760 (1165)
255 3bg3_A Pyruvate carboxylase, m 52.8 90 0.0031 35.1 12.1 106 155-262 200-313 (718)
256 1b73_A Glutamate racemase; iso 52.5 37 0.0013 32.8 8.0 148 400-570 41-190 (254)
257 3rpd_A Methionine synthase (B1 52.4 76 0.0026 32.4 10.7 144 403-562 166-329 (357)
258 3gka_A N-ethylmaleimide reduct 52.4 76 0.0026 32.5 10.7 77 152-244 250-329 (361)
259 2r14_A Morphinone reductase; H 52.3 1.4E+02 0.0049 30.5 12.9 79 153-244 256-341 (377)
260 1i4n_A Indole-3-glycerol phosp 52.3 62 0.0021 31.4 9.5 64 157-236 115-180 (251)
261 1aj0_A DHPS, dihydropteroate s 52.2 1.8E+02 0.0062 28.5 13.7 117 117-264 14-143 (282)
262 3q58_A N-acetylmannosamine-6-p 52.0 81 0.0028 30.0 10.2 87 153-250 37-127 (229)
263 1jcn_A Inosine monophosphate d 52.0 91 0.0031 33.3 11.8 66 154-233 256-323 (514)
264 2dqw_A Dihydropteroate synthas 51.8 1.2E+02 0.004 30.2 11.6 168 373-573 28-217 (294)
265 3m47_A Orotidine 5'-phosphate 51.8 60 0.0021 30.8 9.3 131 422-573 38-172 (228)
266 1zco_A 2-dehydro-3-deoxyphosph 51.7 1.8E+02 0.006 28.2 13.9 48 408-456 37-95 (262)
267 1r3s_A URO-D, uroporphyrinogen 51.6 1.8E+02 0.0062 29.3 13.6 84 158-250 269-359 (367)
268 1zuw_A Glutamate racemase 1; ( 51.4 1E+02 0.0035 30.0 11.1 141 401-561 45-189 (272)
269 3kru_A NADH:flavin oxidoreduct 51.2 2.1E+02 0.0071 28.9 18.1 114 142-259 130-282 (343)
270 4gj1_A 1-(5-phosphoribosyl)-5- 51.1 79 0.0027 30.2 10.1 105 412-520 88-206 (243)
271 1ypx_A Putative vitamin-B12 in 51.1 68 0.0023 32.9 10.2 144 403-561 162-337 (375)
272 1tx2_A DHPS, dihydropteroate s 51.1 1.6E+02 0.0055 29.2 12.5 117 117-264 39-169 (297)
273 3ist_A Glutamate racemase; str 50.8 22 0.00074 35.0 6.0 49 144-196 46-95 (269)
274 3fok_A Uncharacterized protein 50.5 2E+02 0.0067 28.8 12.8 125 408-552 71-215 (307)
275 3lg3_A Isocitrate lyase; conse 50.1 1.2E+02 0.0042 31.7 11.8 107 155-263 170-320 (435)
276 1pii_A N-(5'phosphoribosyl)ant 50.0 2.1E+02 0.0071 30.2 13.9 140 413-571 122-274 (452)
277 3vav_A 3-methyl-2-oxobutanoate 50.0 21 0.00072 35.3 5.7 42 406-452 171-212 (275)
278 1l6s_A Porphobilinogen synthas 49.9 2.1E+02 0.0072 28.6 15.1 227 42-317 58-311 (323)
279 1xk7_A Crotonobetainyl-COA:car 49.8 21 0.00072 37.4 6.1 59 35-129 73-131 (408)
280 1eye_A DHPS 1, dihydropteroate 49.1 1.9E+02 0.0066 28.3 12.7 117 117-264 5-134 (280)
281 4hb7_A Dihydropteroate synthas 49.0 1.3E+02 0.0044 29.5 11.2 119 117-264 6-135 (270)
282 3tr9_A Dihydropteroate synthas 48.9 2.2E+02 0.0075 28.5 14.1 167 373-572 27-221 (314)
283 3ldv_A Orotidine 5'-phosphate 48.9 1.9E+02 0.0066 27.9 12.9 101 414-521 98-206 (255)
284 1ka9_F Imidazole glycerol phos 48.5 73 0.0025 30.1 9.4 98 412-516 88-202 (252)
285 3pm6_A Putative fructose-bisph 48.4 1.2E+02 0.004 30.4 10.9 222 209-491 11-252 (306)
286 3uhf_A Glutamate racemase; str 48.1 16 0.00054 36.1 4.6 48 145-196 66-114 (274)
287 3tsm_A IGPS, indole-3-glycerol 47.8 2E+02 0.007 28.0 12.6 66 412-493 133-199 (272)
288 1nvm_A HOA, 4-hydroxy-2-oxoval 47.5 45 0.0016 33.8 8.1 99 413-518 98-202 (345)
289 3khj_A Inosine-5-monophosphate 47.3 1.2E+02 0.0041 30.9 11.3 87 157-259 61-150 (361)
290 2dwu_A Glutamate racemase; iso 47.3 51 0.0017 32.2 8.2 152 400-572 48-202 (276)
291 3t7v_A Methylornithine synthas 46.9 41 0.0014 33.8 7.7 14 238-251 216-229 (350)
292 3m47_A Orotidine 5'-phosphate 46.9 90 0.0031 29.6 9.7 99 37-187 73-171 (228)
293 2yv4_A Hypothetical protein PH 46.8 34 0.0012 28.5 5.8 46 401-446 52-97 (105)
294 2dep_A Xylanase B, thermostabl 46.8 1.1E+02 0.0037 31.2 10.8 51 151-202 200-258 (356)
295 3ble_A Citramalate synthase fr 46.7 81 0.0028 31.8 9.8 97 158-261 102-220 (337)
296 3l5l_A Xenobiotic reductase A; 46.5 37 0.0013 34.7 7.3 114 143-259 146-300 (363)
297 1ps9_A 2,4-dienoyl-COA reducta 46.3 69 0.0023 35.4 10.0 114 143-259 129-285 (671)
298 2inf_A URO-D, UPD, uroporphyri 46.2 1.4E+02 0.0047 30.1 11.6 83 158-250 258-348 (359)
299 2qv5_A AGR_C_5032P, uncharacte 46.1 53 0.0018 32.1 7.9 103 165-283 56-179 (261)
300 3out_A Glutamate racemase; str 46.0 23 0.00079 34.8 5.3 50 144-196 48-98 (268)
301 2y5s_A DHPS, dihydropteroate s 45.9 78 0.0027 31.5 9.3 172 374-576 23-217 (294)
302 1ep3_A Dihydroorotate dehydrog 45.8 1.2E+02 0.0039 29.7 10.7 67 186-262 91-172 (311)
303 3ndo_A Deoxyribose-phosphate a 45.7 69 0.0024 30.7 8.5 27 39-65 143-170 (231)
304 1eep_A Inosine 5'-monophosphat 45.6 1E+02 0.0034 31.8 10.6 65 411-489 155-221 (404)
305 1tqj_A Ribulose-phosphate 3-ep 45.6 49 0.0017 31.4 7.5 99 154-264 19-124 (230)
306 2g04_A Probable fatty-acid-COA 45.5 7.7 0.00026 40.0 1.9 71 35-151 62-132 (359)
307 2w6r_A Imidazole glycerol phos 45.5 37 0.0013 32.7 6.8 98 158-259 89-205 (266)
308 2z6i_A Trans-2-enoyl-ACP reduc 45.3 89 0.003 31.3 9.8 87 158-260 29-116 (332)
309 4g9p_A 4-hydroxy-3-methylbut-2 45.0 64 0.0022 33.5 8.6 98 153-264 39-147 (406)
310 3l5l_A Xenobiotic reductase A; 45.0 68 0.0023 32.7 9.0 153 400-573 147-343 (363)
311 2gou_A Oxidoreductase, FMN-bin 44.7 90 0.0031 31.9 9.9 116 142-259 148-298 (365)
312 1thf_D HISF protein; thermophI 44.5 37 0.0013 32.3 6.5 96 156-258 87-199 (253)
313 2yw3_A 4-hydroxy-2-oxoglutarat 44.3 55 0.0019 30.6 7.5 124 156-312 74-200 (207)
314 1m3u_A 3-methyl-2-oxobutanoate 44.3 26 0.0009 34.4 5.4 41 151-196 160-200 (264)
315 3b0p_A TRNA-dihydrouridine syn 44.3 1.5E+02 0.0053 29.8 11.5 100 152-258 70-201 (350)
316 1mxs_A KDPG aldolase; 2-keto-3 44.3 2.1E+02 0.0071 27.0 12.5 111 412-565 89-203 (225)
317 2vp8_A Dihydropteroate synthas 44.1 1.8E+02 0.006 29.2 11.6 170 373-573 41-237 (318)
318 3bo9_A Putative nitroalkan dio 44.1 2.1E+02 0.007 28.5 12.3 81 157-250 42-122 (326)
319 2r14_A Morphinone reductase; H 43.6 70 0.0024 32.9 8.9 112 403-515 161-304 (377)
320 3paj_A Nicotinate-nucleotide p 43.5 77 0.0026 31.9 8.8 59 160-235 246-304 (320)
321 1u1j_A 5-methyltetrahydroptero 43.3 3.2E+02 0.011 30.8 14.9 83 147-241 181-275 (765)
322 2b7n_A Probable nicotinate-nuc 42.8 50 0.0017 32.4 7.2 57 163-234 200-257 (273)
323 1h5y_A HISF; histidine biosynt 42.8 33 0.0011 32.3 5.9 95 157-258 91-202 (253)
324 2y88_A Phosphoribosyl isomeras 42.7 29 0.00098 32.9 5.4 78 412-504 35-120 (244)
325 3tdn_A FLR symmetric alpha-bet 42.5 19 0.00064 34.6 4.0 99 412-515 92-205 (247)
326 3ffs_A Inosine-5-monophosphate 42.4 34 0.0012 35.7 6.2 64 157-234 197-275 (400)
327 2ffc_A Orotidine 5-monophospha 42.3 1.6E+02 0.0056 29.9 11.2 160 403-575 111-290 (353)
328 1ep3_A Dihydroorotate dehydrog 42.2 1.3E+02 0.0043 29.5 10.3 69 440-518 89-172 (311)
329 3nav_A Tryptophan synthase alp 41.9 58 0.002 32.0 7.5 124 410-572 36-173 (271)
330 1ps9_A 2,4-dienoyl-COA reducta 41.9 91 0.0031 34.4 10.1 113 400-515 130-285 (671)
331 3qw3_A Orotidine-5-phosphate d 41.8 60 0.0021 31.5 7.6 151 407-573 31-192 (255)
332 2vjq_A Formyl-coenzyme A trans 41.7 35 0.0012 36.0 6.2 43 35-82 71-113 (428)
333 1oy0_A Ketopantoate hydroxymet 41.6 1.1E+02 0.0039 30.1 9.5 98 154-260 115-220 (281)
334 1thf_D HISF protein; thermophI 41.5 49 0.0017 31.4 6.9 98 412-516 87-201 (253)
335 3vni_A Xylose isomerase domain 41.5 1.8E+02 0.0062 27.6 11.2 108 403-520 127-249 (294)
336 1u1j_A 5-methyltetrahydroptero 41.4 1.6E+02 0.0054 33.3 12.0 133 403-561 181-331 (765)
337 1y0e_A Putative N-acetylmannos 41.2 2.1E+02 0.0073 26.2 16.8 96 410-517 25-126 (223)
338 2v82_A 2-dehydro-3-deoxy-6-pho 41.1 87 0.003 28.8 8.4 72 157-250 72-143 (212)
339 1ka9_F Imidazole glycerol phos 41.0 45 0.0015 31.7 6.6 96 157-259 89-201 (252)
340 1ur1_A Endoxylanase; hydrolase 40.9 53 0.0018 33.9 7.4 51 151-202 208-266 (378)
341 3vni_A Xylose isomerase domain 40.9 2.4E+02 0.0082 26.7 12.8 67 148-220 128-202 (294)
342 1wbh_A KHG/KDPG aldolase; lyas 40.7 2.3E+02 0.0078 26.4 13.0 111 412-565 79-193 (214)
343 4dnh_A Uncharacterized protein 40.6 96 0.0033 31.3 8.7 129 74-237 89-235 (396)
344 3ldv_A Orotidine 5'-phosphate 40.1 1.3E+02 0.0046 29.0 9.8 124 433-573 64-194 (255)
345 2gjl_A Hypothetical protein PA 40.0 2.3E+02 0.0077 28.1 11.9 91 157-258 31-122 (328)
346 3r2g_A Inosine 5'-monophosphat 39.9 1.2E+02 0.004 31.1 9.7 66 154-233 101-168 (361)
347 2bmb_A Folic acid synthesis pr 39.8 1.4E+02 0.0047 32.4 10.6 125 373-523 224-369 (545)
348 1geq_A Tryptophan synthase alp 39.6 1.3E+02 0.0043 28.4 9.6 43 155-199 98-140 (248)
349 2jbm_A Nicotinate-nucleotide p 39.4 61 0.0021 32.3 7.3 58 162-234 214-272 (299)
350 2eja_A URO-D, UPD, uroporphyri 39.4 1E+02 0.0035 30.8 9.2 83 157-250 244-334 (338)
351 3elf_A Fructose-bisphosphate a 39.3 3.2E+02 0.011 27.7 15.9 246 154-491 9-277 (349)
352 3fok_A Uncharacterized protein 39.0 3E+02 0.01 27.4 13.7 142 374-551 107-267 (307)
353 1gvf_A Tagatose-bisphosphate a 38.9 1.7E+02 0.0059 28.8 10.4 209 214-491 7-233 (286)
354 3lab_A Putative KDPG (2-keto-3 38.9 2.5E+02 0.0087 26.4 12.3 100 412-554 76-184 (217)
355 2nly_A BH1492 protein, diverge 38.8 95 0.0033 30.0 8.4 89 161-251 23-127 (245)
356 1h5y_A HISF; histidine biosynt 38.6 67 0.0023 30.1 7.3 99 412-516 90-204 (253)
357 2p10_A MLL9387 protein; putati 38.6 3E+02 0.01 27.1 15.4 164 53-307 46-248 (286)
358 2qgh_A Diaminopimelate decarbo 38.3 1.8E+02 0.0061 30.0 11.2 86 159-249 118-224 (425)
359 4dbe_A Orotidine 5'-phosphate 38.2 1.3E+02 0.0046 28.3 9.3 138 412-574 17-158 (222)
360 1qo2_A Molecule: N-((5-phospho 38.1 1.4E+02 0.0048 28.0 9.6 94 157-259 87-193 (241)
361 3glc_A Aldolase LSRF; TIM barr 38.1 92 0.0031 30.9 8.4 87 159-259 132-228 (295)
362 2yci_X 5-methyltetrahydrofolat 37.9 2.9E+02 0.01 26.8 13.4 119 117-262 9-133 (271)
363 3dxi_A Putative aldolase; TIM 37.9 62 0.0021 32.6 7.2 92 419-518 98-194 (320)
364 1yxy_A Putative N-acetylmannos 37.8 2.5E+02 0.0086 26.0 11.9 93 155-259 39-138 (234)
365 3l52_A Orotidine 5'-phosphate 37.8 88 0.003 30.9 8.1 153 401-563 43-211 (284)
366 2ztj_A Homocitrate synthase; ( 37.6 2.3E+02 0.0079 28.9 11.7 99 158-262 80-197 (382)
367 3ctl_A D-allulose-6-phosphate 37.6 1.1E+02 0.0037 29.2 8.5 97 155-264 16-118 (231)
368 1tx2_A DHPS, dihydropteroate s 37.5 3.1E+02 0.011 27.0 14.8 166 373-574 39-225 (297)
369 3igs_A N-acetylmannosamine-6-p 37.4 2.7E+02 0.0092 26.2 16.6 95 409-517 37-136 (232)
370 1ur1_A Endoxylanase; hydrolase 37.4 70 0.0024 32.9 7.7 52 407-459 208-267 (378)
371 1qo2_A Molecule: N-((5-phospho 37.1 85 0.0029 29.6 7.8 98 412-516 86-194 (241)
372 2uwf_A Endoxylanase, alkaline 37.0 63 0.0022 33.0 7.2 51 151-202 201-259 (356)
373 3tr2_A Orotidine 5'-phosphate 36.9 2.8E+02 0.0097 26.3 12.2 102 413-521 78-188 (239)
374 2c6q_A GMP reductase 2; TIM ba 36.6 40 0.0014 34.4 5.6 65 157-235 174-253 (351)
375 1f6y_A 5-methyltetrahydrofolat 36.5 3E+02 0.01 26.5 13.2 91 156-262 29-124 (262)
376 2y88_A Phosphoribosyl isomeras 36.5 89 0.003 29.3 7.8 93 156-257 87-196 (244)
377 3hbl_A Pyruvate carboxylase; T 36.5 1.4E+02 0.0046 35.6 10.8 102 414-518 633-743 (1150)
378 1ypf_A GMP reductase; GUAC, pu 36.4 43 0.0015 33.8 5.8 65 157-234 162-239 (336)
379 3qxc_A Dethiobiotin synthetase 36.4 63 0.0022 31.0 6.7 81 144-238 115-201 (242)
380 1geq_A Tryptophan synthase alp 36.3 1.2E+02 0.0039 28.7 8.7 91 153-251 20-132 (248)
381 4exq_A UPD, URO-D, uroporphyri 36.3 2.8E+02 0.0094 28.1 12.0 84 158-250 266-357 (368)
382 1h1y_A D-ribulose-5-phosphate 36.2 52 0.0018 31.0 6.1 86 154-251 21-112 (228)
383 3qw4_B UMP synthase; N-termina 36.0 59 0.002 34.4 6.9 155 403-573 28-193 (453)
384 1r85_A Endo-1,4-beta-xylanase; 36.0 67 0.0023 33.1 7.2 51 151-202 211-269 (379)
385 1rd5_A Tryptophan synthase alp 36.0 88 0.003 30.0 7.8 89 152-251 32-142 (262)
386 1o94_A Tmadh, trimethylamine d 35.7 4.9E+02 0.017 28.8 16.0 112 142-259 136-296 (729)
387 1ub3_A Aldolase protein; schif 35.7 1.5E+02 0.0051 28.0 9.1 26 40-65 131-157 (220)
388 2vvt_A Glutamate racemase; iso 35.7 49 0.0017 32.6 6.0 50 400-452 65-114 (290)
389 2nly_A BH1492 protein, diverge 35.1 37 0.0013 32.9 4.8 142 425-573 30-209 (245)
390 1f6y_A 5-methyltetrahydrofolat 35.0 3E+02 0.01 26.6 11.4 138 412-573 29-181 (262)
391 2ocz_A 3-dehydroquinate dehydr 34.8 1.9E+02 0.0063 27.5 9.7 96 153-261 79-180 (231)
392 2jfq_A Glutamate racemase; cel 34.8 46 0.0016 32.8 5.6 49 401-452 64-112 (286)
393 3l0g_A Nicotinate-nucleotide p 34.7 63 0.0022 32.2 6.4 62 157-235 219-280 (300)
394 2jfz_A Glutamate racemase; cel 34.5 42 0.0014 32.4 5.1 49 401-452 42-90 (255)
395 2uwf_A Endoxylanase, alkaline 34.5 79 0.0027 32.2 7.4 51 407-458 201-259 (356)
396 1pii_A N-(5'phosphoribosyl)ant 34.5 1.5E+02 0.005 31.4 9.6 64 157-236 122-186 (452)
397 2egz_A 3-dehydroquinate dehydr 34.4 1.8E+02 0.0061 27.3 9.4 101 410-519 73-173 (219)
398 3k30_A Histamine dehydrogenase 34.3 2.3E+02 0.0079 31.2 11.9 113 400-516 145-300 (690)
399 1us2_A Xylanase10C, endo-beta- 34.3 2.1E+02 0.0073 30.8 11.1 51 151-202 359-417 (530)
400 1t7l_A 5-methyltetrahydroptero 34.2 2.4E+02 0.0081 31.9 11.7 134 403-561 584-739 (766)
401 1gte_A Dihydropyrimidine dehyd 33.9 2.7E+02 0.0092 32.5 12.8 72 152-233 648-734 (1025)
402 3tqv_A Nicotinate-nucleotide p 33.5 89 0.0031 30.9 7.3 62 157-235 210-271 (287)
403 4g9p_A 4-hydroxy-3-methylbut-2 33.5 66 0.0023 33.4 6.5 81 410-493 40-148 (406)
404 3t7v_A Methylornithine synthas 33.1 1.1E+02 0.0037 30.6 8.2 76 412-494 153-241 (350)
405 2oho_A Glutamate racemase; iso 33.0 59 0.002 31.7 6.0 49 401-452 54-102 (273)
406 4djd_C C/Fe-SP, corrinoid/iron 33.0 2.1E+02 0.007 30.2 10.3 83 164-262 126-209 (446)
407 2hsa_B 12-oxophytodienoate red 32.8 4.2E+02 0.014 27.2 13.7 78 154-244 262-361 (402)
408 3eeg_A 2-isopropylmalate synth 32.6 3.8E+02 0.013 26.6 14.2 142 412-577 32-194 (325)
409 1vyr_A Pentaerythritol tetrani 32.6 2.1E+02 0.0071 29.1 10.3 115 143-259 149-299 (364)
410 1n82_A Xylanase, intra-cellula 32.6 83 0.0028 31.6 7.2 52 150-202 186-245 (331)
411 3rmj_A 2-isopropylmalate synth 32.5 2E+02 0.0067 29.4 10.1 100 155-261 90-211 (370)
412 1j93_A UROD, uroporphyrinogen 32.4 1.3E+02 0.0044 30.2 8.7 82 159-249 261-349 (353)
413 1r85_A Endo-1,4-beta-xylanase; 32.4 89 0.0031 32.1 7.5 52 407-459 211-270 (379)
414 2qf7_A Pyruvate carboxylase pr 32.2 1.5E+02 0.0052 35.2 10.3 102 157-262 650-760 (1165)
415 3ctl_A D-allulose-6-phosphate 32.1 91 0.0031 29.7 7.0 84 412-508 17-106 (231)
416 4e38_A Keto-hydroxyglutarate-a 32.0 1.5E+02 0.0052 28.2 8.5 87 156-265 97-183 (232)
417 3aty_A Tcoye, prostaglandin F2 32.0 1.2E+02 0.0042 31.0 8.5 113 142-259 160-312 (379)
418 2gzm_A Glutamate racemase; enz 32.0 58 0.002 31.6 5.7 49 145-196 45-93 (267)
419 3apt_A Methylenetetrahydrofola 31.7 76 0.0026 31.7 6.6 155 409-568 30-220 (310)
420 2h9a_B CO dehydrogenase/acetyl 31.7 2E+02 0.0069 28.7 9.7 113 412-551 78-199 (310)
421 4ab4_A Xenobiotic reductase B; 31.4 1.6E+02 0.0056 29.9 9.2 109 403-516 148-285 (362)
422 3glc_A Aldolase LSRF; TIM barr 31.3 3.9E+02 0.013 26.3 12.4 114 414-552 131-252 (295)
423 1w32_A Endo-1,4-beta-xylanase 31.2 86 0.0029 31.8 7.0 51 151-202 191-251 (348)
424 1vrd_A Inosine-5'-monophosphat 31.2 51 0.0017 35.1 5.6 62 159-234 293-369 (494)
425 2fli_A Ribulose-phosphate 3-ep 31.2 3E+02 0.01 25.0 11.9 50 411-460 19-73 (220)
426 2vws_A YFAU, 2-keto-3-deoxy su 31.1 2.8E+02 0.0095 26.7 10.5 79 157-249 31-113 (267)
427 1wa3_A 2-keto-3-deoxy-6-phosph 30.8 1.7E+02 0.0058 26.5 8.6 72 157-250 75-146 (205)
428 3tjx_A Dihydroorotate dehydrog 30.8 1.8E+02 0.006 29.3 9.4 20 156-175 62-81 (354)
429 1zuw_A Glutamate racemase 1; ( 30.5 1.8E+02 0.0061 28.2 9.0 49 145-196 45-94 (272)
430 1o4u_A Type II quinolic acid p 30.4 94 0.0032 30.7 6.9 62 159-235 207-269 (285)
431 3r12_A Deoxyribose-phosphate a 30.3 1.6E+02 0.0054 28.7 8.4 26 40-65 171-197 (260)
432 3cqj_A L-ribulose-5-phosphate 30.2 1.1E+02 0.0039 29.3 7.6 68 147-220 142-214 (295)
433 1vhc_A Putative KHG/KDPG aldol 30.2 1.3E+02 0.0043 28.5 7.6 79 156-258 80-161 (224)
434 3n9r_A Fructose-bisphosphate a 30.1 4.2E+02 0.014 26.3 18.3 41 158-200 9-49 (307)
435 3zwt_A Dihydroorotate dehydrog 30.0 2.1E+02 0.0073 29.1 9.8 88 447-552 145-249 (367)
436 3mcm_A 2-amino-4-hydroxy-6-hyd 29.9 2E+02 0.0068 30.3 9.6 120 117-264 190-325 (442)
437 2dep_A Xylanase B, thermostabl 29.6 1.1E+02 0.0036 31.2 7.4 51 407-458 200-258 (356)
438 1wbh_A KHG/KDPG aldolase; lyas 29.3 2.4E+02 0.0081 26.3 9.3 79 156-258 79-160 (214)
439 3eeg_A 2-isopropylmalate synth 29.1 1.3E+02 0.0044 30.2 7.8 89 156-251 85-192 (325)
440 1n82_A Xylanase, intra-cellula 29.0 1.2E+02 0.0041 30.4 7.7 52 406-458 186-245 (331)
441 1gte_A Dihydropyrimidine dehyd 28.9 2.6E+02 0.0089 32.6 11.5 67 442-517 627-710 (1025)
442 1icp_A OPR1, 12-oxophytodienoa 28.8 2.6E+02 0.0088 28.5 10.3 79 153-244 257-343 (376)
443 3iv3_A Tagatose 1,6-diphosphat 28.8 4.6E+02 0.016 26.3 12.7 129 414-559 116-280 (332)
444 2vvt_A Glutamate racemase; iso 28.7 70 0.0024 31.5 5.7 50 144-196 65-114 (290)
445 3iv3_A Tagatose 1,6-diphosphat 28.5 4.6E+02 0.016 26.3 11.9 76 152-236 188-280 (332)
446 1w32_A Endo-1,4-beta-xylanase 28.5 1.1E+02 0.0037 31.0 7.3 51 407-458 191-251 (348)
447 1ujp_A Tryptophan synthase alp 28.5 80 0.0027 30.9 6.0 90 154-251 32-143 (271)
448 1zfj_A Inosine monophosphate d 28.5 1.7E+02 0.0058 30.8 9.1 66 155-234 235-302 (491)
449 3dx5_A Uncharacterized protein 28.5 2.2E+02 0.0075 26.9 9.3 139 41-220 47-190 (286)
450 3niy_A Endo-1,4-beta-xylanase; 28.1 3.7E+02 0.013 27.0 11.1 47 151-198 202-255 (341)
451 3cyv_A URO-D, UPD, uroporphyri 28.0 2.5E+02 0.0086 28.0 10.0 84 158-250 256-347 (354)
452 3bo9_A Putative nitroalkan dio 28.0 4.1E+02 0.014 26.2 11.5 89 412-515 41-129 (326)
453 3hbl_A Pyruvate carboxylase; T 27.9 2.4E+02 0.0083 33.4 11.0 102 158-262 633-743 (1150)
454 3tfx_A Orotidine 5'-phosphate 27.9 1.4E+02 0.0047 29.0 7.6 124 435-573 44-176 (259)
455 1mxs_A KDPG aldolase; 2-keto-3 27.8 1.4E+02 0.0049 28.1 7.6 79 156-258 89-170 (225)
456 3gka_A N-ethylmaleimide reduct 27.7 1.7E+02 0.0057 29.9 8.5 110 402-516 155-293 (361)
457 3vk5_A MOEO5; TIM barrel, tran 27.6 93 0.0032 30.8 6.2 48 408-455 53-103 (286)
458 3fgn_A Dethiobiotin synthetase 27.6 1.7E+02 0.0059 28.0 8.2 121 401-548 111-242 (251)
459 3ngj_A Deoxyribose-phosphate a 27.5 1.7E+02 0.0059 28.0 8.0 27 38-65 154-181 (239)
460 1i1w_A Endo-1,4-beta-xylanase; 27.4 1.2E+02 0.0043 29.8 7.4 51 151-202 184-241 (303)
461 3emz_A Xylanase, endo-1,4-beta 27.4 1.1E+02 0.0037 30.9 6.9 51 151-202 186-244 (331)
462 1x1o_A Nicotinate-nucleotide p 27.3 1.2E+02 0.0042 29.9 7.1 58 159-233 210-267 (286)
463 4djd_C C/Fe-SP, corrinoid/iron 27.3 3.5E+02 0.012 28.4 10.9 82 421-518 127-209 (446)
464 2jfz_A Glutamate racemase; cel 27.3 53 0.0018 31.6 4.4 49 145-196 42-90 (255)
465 1w8s_A FBP aldolase, fructose- 27.2 1.8E+02 0.0061 28.1 8.3 84 158-243 98-189 (263)
466 3ewb_X 2-isopropylmalate synth 27.1 4.5E+02 0.015 25.6 15.1 150 400-577 23-193 (293)
467 2qul_A D-tagatose 3-epimerase; 27.0 3.9E+02 0.013 25.0 11.9 136 403-548 128-286 (290)
468 2jfn_A Glutamate racemase; cel 26.9 91 0.0031 30.6 6.2 50 400-452 62-112 (285)
469 1xyz_A 1,4-beta-D-xylan-xylano 26.8 2.7E+02 0.0092 28.0 9.9 51 151-202 208-268 (347)
470 2egz_A 3-dehydroquinate dehydr 26.7 3.6E+02 0.012 25.1 10.2 96 154-260 73-170 (219)
471 2jfq_A Glutamate racemase; cel 26.7 68 0.0023 31.5 5.2 49 145-196 64-112 (286)
472 2nzl_A Hydroxyacid oxidase 1; 26.5 65 0.0022 33.4 5.2 14 158-171 266-279 (392)
473 2gjl_A Hypothetical protein PA 26.4 4.6E+02 0.016 25.7 11.6 95 412-517 30-125 (328)
474 3iwp_A Copper homeostasis prot 26.4 4.7E+02 0.016 25.7 12.0 119 120-264 92-217 (287)
475 2oho_A Glutamate racemase; iso 26.3 83 0.0028 30.6 5.7 49 145-196 54-102 (273)
476 3nl6_A Thiamine biosynthetic b 26.3 4.4E+02 0.015 28.3 11.9 44 410-454 27-75 (540)
477 1ujp_A Tryptophan synthase alp 26.2 1.8E+02 0.0061 28.3 8.1 91 412-515 110-207 (271)
478 2c6q_A GMP reductase 2; TIM ba 25.9 4.6E+02 0.016 26.3 11.5 64 156-233 121-188 (351)
479 3ru6_A Orotidine 5'-phosphate 25.9 2.4E+02 0.0083 28.0 9.0 101 158-265 96-202 (303)
480 3emz_A Xylanase, endo-1,4-beta 25.9 1.2E+02 0.0042 30.5 7.0 48 407-455 186-240 (331)
481 1ta3_B Endo-1,4-beta-xylanase; 25.8 2.8E+02 0.0097 27.2 9.7 51 151-202 183-242 (303)
482 2nli_A Lactate oxidase; flavoe 25.5 78 0.0027 32.4 5.5 16 156-171 241-256 (368)
483 3ixl_A Amdase, arylmalonate de 25.4 4.3E+02 0.015 24.9 12.5 149 400-572 42-204 (240)
484 2hsa_B 12-oxophytodienoate red 25.4 3.5E+02 0.012 27.8 10.6 113 402-515 165-324 (402)
485 1p0k_A Isopentenyl-diphosphate 25.4 3.4E+02 0.012 27.0 10.4 97 152-260 73-184 (349)
486 1nq6_A XYS1; glycoside hydrola 25.3 1.8E+02 0.0061 28.5 8.0 50 152-202 182-239 (302)
487 1w8s_A FBP aldolase, fructose- 25.2 4.5E+02 0.016 25.1 14.2 128 413-560 97-232 (263)
488 3dxi_A Putative aldolase; TIM 25.1 2E+02 0.0069 28.8 8.4 91 163-261 98-193 (320)
489 3ivs_A Homocitrate synthase, m 24.8 6E+02 0.021 26.3 13.3 133 49-231 117-252 (423)
490 1vr6_A Phospho-2-dehydro-3-deo 24.8 5.5E+02 0.019 25.9 12.5 52 38-99 116-169 (350)
491 3u0h_A Xylose isomerase domain 24.7 4.2E+02 0.014 24.6 10.6 105 403-517 117-251 (281)
492 2yv4_A Hypothetical protein PH 24.7 1.2E+02 0.0042 25.0 5.6 45 146-190 53-97 (105)
493 2fds_A Orotidine-monophosphate 24.1 1.1E+02 0.0039 31.1 6.3 166 403-576 101-281 (352)
494 2h9a_A Carbon monoxide dehydro 24.0 4E+02 0.014 27.9 10.8 80 422-518 128-208 (445)
495 3qc0_A Sugar isomerase; TIM ba 24.0 4.3E+02 0.015 24.4 10.7 128 403-548 118-272 (275)
496 2z6i_A Trans-2-enoyl-ACP reduc 24.0 2.4E+02 0.0082 28.0 8.8 90 412-517 27-117 (332)
497 3kws_A Putative sugar isomeras 23.9 3.1E+02 0.01 25.9 9.4 144 344-515 100-261 (287)
498 3qz6_A HPCH/HPAI aldolase; str 23.9 3.4E+02 0.012 26.1 9.6 79 157-249 29-111 (261)
499 3aty_A Tcoye, prostaglandin F2 23.8 5.8E+02 0.02 25.8 13.4 73 153-244 267-349 (379)
500 3fs2_A 2-dehydro-3-deoxyphosph 23.6 5.4E+02 0.018 25.4 11.4 155 38-261 51-221 (298)
No 1
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=100.00 E-value=6.7e-56 Score=470.50 Aligned_cols=274 Identities=19% Similarity=0.249 Sum_probs=232.1
Q ss_pred ccccCCCchhhhccccCcccCCCCcccccccCCChHHHHHHHHHHHHH---HHhhc---CCcccccccccCCCCCCCccc
Q psy15811 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRG---HIETA---ASIGPYGTVLRDGSEYSGHYV 338 (581)
Q Consensus 265 ~~~~dG~~gt~L~~~~g~~~~g~~lws~~~~~~~Pe~v~~vh~~yl~a---iI~Tn---a~~~~~~~~~~~~~~~~~~~~ 338 (581)
++++||||||+|+++ |++. .++|++++++++||.|+++|++|++| ||+|| ++..++.+++
T Consensus 22 ilIlDGgmGT~L~~~-G~~~--~~~ws~~l~l~~Pe~V~~iH~~Yl~AGAdII~TNTf~A~~~~l~~~G----------- 87 (406)
T 1lt8_A 22 IVIGDGGFVFALEKR-GYVK--AGPWTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLENRG----------- 87 (406)
T ss_dssp CEECCCCHHHHHHHH-TSSC--TTTCCCTHHHHCHHHHHHHHHHHHHTTCSEEECSCTTCSSCC----------------
T ss_pred EEEEeCccchHHHHC-CCCC--CcccchHhhccCHHHHHHHHHHHHHhCccceeccccccCHHHHHhcC-----------
Confidence 789999999999998 8864 35899999999999999999999999 99999 5666665543
Q ss_pred CCCC---HHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCceEEeccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy15811 339 DSMT---EADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVE 415 (581)
Q Consensus 339 ~~~~---~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~v~VagsiGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~ 415 (581)
++ .+++.+||+.||++||+|+++. +++|+|||||+|+++ ..+++++++++|++|++
T Consensus 88 --~~~~~~~~~~eln~~Av~LAreAa~~~--------~~~VAGsIGP~g~~l-----------~~~s~eel~~~~~eqi~ 146 (406)
T 1lt8_A 88 --NYVLEKISGQEVNEAAADIARQVADEG--------DALVAGGVSQTPSYL-----------SAKSETEVKKVFLQQLE 146 (406)
T ss_dssp ----------CHHHHHHHHHHHHHHHTTT--------TCEEEEEECCCHHHH-----------TTCHHHHHHHHHHHHHH
T ss_pred --CccchhHHHHHHHHHHHHHHHHHHhcC--------CCEEEEEcCCccccc-----------CCCCHHHHHHHHHHHHH
Confidence 32 2457899999999999998642 479999999998644 35899999999999999
Q ss_pred HHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECC-CCC
Q psy15811 416 ALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRP 494 (581)
Q Consensus 416 ~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC-~~p 494 (581)
.|+++|||+|++||||++.|++++++++++ .++|||+||||.++|+ ++|+++++++..+. ..++++||||| ++|
T Consensus 147 ~L~~~GvDlll~ETi~~~~Eakaa~~a~~~-~~lPv~iS~T~~~~G~-l~G~~~~~~~~~l~---~~~~~avGvNC~~gP 221 (406)
T 1lt8_A 147 VFMKKNVDFLIAEYFEHVEEAVWAVETLIA-SGKPVAATMAIGPEGD-LHGVPPGEAAVRLV---KAGASIIGVNCHFDP 221 (406)
T ss_dssp HHHHHTCSEEEECCCSCHHHHHHHHHHHGG-GTSCEEEEECCBTTBC-TTCCCHHHHHHHHH---TTTCSEEEEESSSCH
T ss_pred HHhhCCCCEEEEcccCCHHHHHHHHHHHHH-hCCcEEEEEEECCCCC-cCCCcHHHHHHHhh---cCCCCEEEecCCCCH
Confidence 999999999999999999999999999997 5899999999998898 99999999999983 45689999999 599
Q ss_pred ccchHHHHHHHhh----CCCCeEEEeeCCCCCcccccccccC------CcCHH-----HHHHHHHHHHHcCCcEEeecCC
Q psy15811 495 SHVSTLVRCIKQS----HPTVQTIVYPNKGGVWDSVHMKWLD------TEDEY-----SILHYVPQWLEEGVNIIGGCCE 559 (581)
Q Consensus 495 ~~~~~~l~~l~~~----~~~~pl~~ypNag~~~~~~~~~~~~------~~~~~-----~~~~~~~~w~~~G~~iiGGCCG 559 (581)
+.|.++|+.++.. +.+.|+++|||+|..|+.....|.. ..+|. +|++++++|.+.|++|||||||
T Consensus 222 ~~~~~~l~~l~~~~~~~g~~~pl~vyPNag~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~w~~~Ga~iIGGCCG 301 (406)
T 1lt8_A 222 TISLKTVKLMKEGLEAAQLKAHLMSQPLAYHTPDANKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYIGGCCG 301 (406)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCEEEEECCSBCCTTCCTTCGGGSTTTTTSCGGGBCCHHHHHHHHHHHHHHTEEEECCCTT
T ss_pred HHHHHHHHHHHHhhhhcCCCccEEEecCCCCCCcCCcccccCCccccccCCHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 9999999999864 1258999999999877755456753 23343 5999999999999999999999
Q ss_pred CchHHHHHHHHHHhcccCC
Q psy15811 560 VTSYEIQQMRIMIDEFNTK 578 (581)
Q Consensus 560 t~P~hI~al~~~l~~~~~~ 578 (581)
|||+||++|++.++...++
T Consensus 302 TtPeHI~aia~~l~~~~~~ 320 (406)
T 1lt8_A 302 FEPYHIRAIAEELAPERGF 320 (406)
T ss_dssp CCHHHHHHHHHHTHHHHSC
T ss_pred CCHHHHHHHHHHHhccCCC
Confidence 9999999999999876643
No 2
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=100.00 E-value=4e-55 Score=464.60 Aligned_cols=260 Identities=18% Similarity=0.222 Sum_probs=217.0
Q ss_pred ceEEEeccHHHHHhhCcCCCCCCCCCccccccCCChHHHHHHHHHHHHhccccccccccccccccHhhcCCC---HHHHH
Q psy15811 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYS---EQEAL 82 (581)
Q Consensus 6 ~ili~DGamgT~L~~~~g~~~~~~~~ws~~~~l~~Pe~v~~iH~~yl~AGAdiI~TnTf~a~~~~l~~~g~~---~~~~~ 82 (581)
+|+|+||||||+|+++ |++. .++|++.+|+++||.|++||++|++||||||+||||++|+.+|.++|++ +++++
T Consensus 21 ~ilIlDGgmGT~L~~~-G~~~--~~~ws~~l~l~~Pe~V~~iH~~Yl~AGAdII~TNTf~A~~~~l~~~G~~~~~~~~~~ 97 (406)
T 1lt8_A 21 EIVIGDGGFVFALEKR-GYVK--AGPWTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLENRGNYVLEKISGQ 97 (406)
T ss_dssp CCEECCCCHHHHHHHH-TSSC--TTTCCCTHHHHCHHHHHHHHHHHHHTTCSEEECSCTTCSSCC-------------CH
T ss_pred CEEEEeCccchHHHHC-CCCC--CcccchHhhccCHHHHHHHHHHHHHhCccceeccccccCHHHHHhcCCccchhHHHH
Confidence 4899999999999999 9874 2589999999999999999999999999999999999999999999985 25688
Q ss_pred HHHHHHHHHHHHHhhhhcCCCcccccccccccCCCeEEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q psy15811 83 DLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV 162 (581)
Q Consensus 83 ~i~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~~~~~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~ 162 (581)
+||++||+|||+|+++. +++|||||||+|.++ +.+++++++++|++|+++|+
T Consensus 98 eln~~Av~LAreAa~~~-----------------~~~VAGsIGP~g~~l-----------~~~s~eel~~~~~eqi~~L~ 149 (406)
T 1lt8_A 98 EVNEAAADIARQVADEG-----------------DALVAGGVSQTPSYL-----------SAKSETEVKKVFLQQLEVFM 149 (406)
T ss_dssp HHHHHHHHHHHHHHTTT-----------------TCEEEEEECCCHHHH-----------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcC-----------------CCEEEEEcCCccccc-----------CCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999751 689999999999743 35899999999999999999
Q ss_pred HCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC-ChhhH
Q psy15811 163 RAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV-RPSHV 241 (581)
Q Consensus 163 ~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~-~p~~~ 241 (581)
++|||+|++|||+++.|++++++++++. ++|||+|||++++|+ ++|+++.+++..+. ..++++|||||+ +|++|
T Consensus 150 ~~GvDlll~ETi~~~~Eakaa~~a~~~~-~lPv~iS~T~~~~G~-l~G~~~~~~~~~l~---~~~~~avGvNC~~gP~~~ 224 (406)
T 1lt8_A 150 KKNVDFLIAEYFEHVEEAVWAVETLIAS-GKPVAATMAIGPEGD-LHGVPPGEAAVRLV---KAGASIIGVNCHFDPTIS 224 (406)
T ss_dssp HHTCSEEEECCCSCHHHHHHHHHHHGGG-TSCEEEEECCBTTBC-TTCCCHHHHHHHHH---TTTCSEEEEESSSCHHHH
T ss_pred hCCCCEEEEcccCCHHHHHHHHHHHHHh-CCcEEEEEEECCCCC-cCCCcHHHHHHHhh---cCCCCEEEecCCCCHHHH
Confidence 9999999999999999999999999985 799999999999999 89999999998876 467999999997 89999
Q ss_pred HHHHHHHHhh----CCCCceEEecCCCccccC--CC--------------------chhhh---ccccCcccCCCCcccc
Q psy15811 242 STLVRCIKQS----HPTVQTIVYPNKGVKLLD--GS--------------------FTSQV---SRHTIKDVDGHPLWSS 292 (581)
Q Consensus 242 ~~~l~~l~~~----~~~~p~~~~pnag~~~~d--G~--------------------~gt~L---~~~~g~~~~g~~lws~ 292 (581)
.++|+.+.+. ..+.|+++|||++...-. .+ +.... ... |..+.|+|
T Consensus 225 ~~~l~~l~~~~~~~g~~~pl~vyPNag~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~w~~~-Ga~iIGGC---- 299 (406)
T 1lt8_A 225 LKTVKLMKEGLEAAQLKAHLMSQPLAYHTPDANKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNL-GVRYIGGC---- 299 (406)
T ss_dssp HHHHHHHHHHHHTTTCCCEEEEECCSBCCTTCCTTCGGGSTTTTTSCGGGBCCHHHHHHHHHHHHHH-TEEEECCC----
T ss_pred HHHHHHHHHhhhhcCCCccEEEecCCCCCCcCCcccccCCccccccCCHHHHHHHHHHHHHHHHHhC-CCeEEEEe----
Confidence 9999999864 137899999999632110 11 11111 222 67778999
Q ss_pred cccCCChHHHHHHHHH
Q psy15811 293 VYLTTEPEACVETHRD 308 (581)
Q Consensus 293 ~~~~~~Pe~v~~vh~~ 308 (581)
|.++|+||+++.+.
T Consensus 300 --CGTtPeHI~aia~~ 313 (406)
T 1lt8_A 300 --CGFEPYHIRAIAEE 313 (406)
T ss_dssp --TTCCHHHHHHHHHH
T ss_pred --cCCCHHHHHHHHHH
Confidence 99999999999443
No 3
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=100.00 E-value=1.8e-54 Score=479.42 Aligned_cols=272 Identities=22% Similarity=0.272 Sum_probs=239.4
Q ss_pred CccccCCCchhhhccccCcccCCCCcccccccCCChHHHHHHHHHHHHH---HHhhc---CCcccccccccCCCCCCCcc
Q psy15811 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRG---HIETA---ASIGPYGTVLRDGSEYSGHY 337 (581)
Q Consensus 264 g~~~~dG~~gt~L~~~~g~~~~g~~lws~~~~~~~Pe~v~~vh~~yl~a---iI~Tn---a~~~~~~~~~~~~~~~~~~~ 337 (581)
.++++||||||+|+++ |++. ..++| ++++||.|+++|++|++| ||+|| ++..++.++
T Consensus 14 ~ililDGamGT~L~~~-g~~~-~~el~----~l~~Pe~V~~iH~~Yl~AGAdii~TnTf~a~~~~l~~~----------- 76 (566)
T 1q7z_A 14 RVLLLDGAYGTEFMKY-GYDD-LPEEL----NIKAPDVVLKVHRSYIESGSDVILTNTFGATRMKLRKH----------- 76 (566)
T ss_dssp CCEECCCCSHHHHHHT-TCCS-CGGGH----HHHCHHHHHHHHHHHHHHTCSEEECSCTTCSHHHHGGG-----------
T ss_pred CeEEEEChHHHHHHHC-CCCC-Cchhh----cccCHHHHHHHHHHHHHhhcceeecCcccCCHHHHHhc-----------
Confidence 3788999999999988 8764 23455 689999999999999999 99999 666667665
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCceEEeccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q psy15811 338 VDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEAL 417 (581)
Q Consensus 338 ~~~~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~v~VagsiGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l 417 (581)
| + .+++.+||+++|++||+|+++ + +|+|||||+|+++++ | +.+++++++++|++|++.|
T Consensus 77 -g-~-~~~~~el~~~av~lAr~a~~~---------~-~VAGsiGP~g~~~~~-------~-~~~~~~e~~~~~~~qi~~l 135 (566)
T 1q7z_A 77 -G-L-EDKLDPIVRNAVRIARRAAGE---------K-LVFGDIGPTGELPYP-------L-GSTLFEEFYENFRETVEIM 135 (566)
T ss_dssp -T-C-GGGHHHHHHHHHHHHHHHHTT---------S-EEEEEECCCSCCBTT-------T-SSBCHHHHHHHHHHHHHHH
T ss_pred -C-c-hHHHHHHHHHHHHHHHHHHhC---------C-eEEEeCCCcccCCCC-------C-CCCCHHHHHHHHHHHHHHH
Confidence 3 6 578899999999999999753 3 999999999987632 2 2589999999999999999
Q ss_pred HhCCCCEEEecccCCHHHHHHHHHHHHh-cCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECC-CCCc
Q psy15811 418 VRAGVDYLALETIPAEKEALALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPS 495 (581)
Q Consensus 418 ~~~gvD~i~~ET~p~~~Ea~a~~~~~~~-~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC-~~p~ 495 (581)
.++|||+|++||+|++.|++++++++++ ++++|+|+||||.++|++++|+++++++..+ ...++++||+|| ++|+
T Consensus 136 ~~~gvD~l~~ET~~~~~Ea~aa~~a~~~~~~~~Pv~vS~t~~~~g~~~~G~~~~~~~~~l---~~~~~~avG~NC~~gp~ 212 (566)
T 1q7z_A 136 VEEGVDGIIFETFSDILELKAAVLAAREVSRDVFLIAHMTFDEKGRSLTGTDPANFAITF---DELDIDALGINCSLGPE 212 (566)
T ss_dssp HHTTCSEEEEEEECCHHHHHHHHHHHHHHCSSSCEEEEECCCTTSCCTTSCCHHHHHHHH---HTSSCSEEEEESSSCHH
T ss_pred HhCCCCEEEEeccCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCeeCCCCcHHHHHHHh---hccCCCEEEEeCCCCHH
Confidence 9999999999999999999999999997 4799999999999999999999999999998 345789999999 6999
Q ss_pred cchHHHHHHHhhCCCCeEEEeeCCCCCccccc-ccccCCcCHHHHHHHHHHHHHcCCcEEeecCCCchHHHHHHHHHHhc
Q psy15811 496 HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVH-MKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDE 574 (581)
Q Consensus 496 ~~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~-~~~~~~~~~~~~~~~~~~w~~~G~~iiGGCCGt~P~hI~al~~~l~~ 574 (581)
+|.++|+.++... ++|+++|||+|.++..+. ..| ..+|++|++++++|++.|++||||||||||+||++|++.+++
T Consensus 213 ~~~~~l~~l~~~~-~~p~~vyPNaG~p~~~~~~~~~--~~~p~~~a~~~~~~~~~G~~iiGGCCGTtP~hI~aia~~~~~ 289 (566)
T 1q7z_A 213 EILPIFQELSQYT-DKFLVVEPNAGKPIVENGKTVY--PLKPHDFAVHIDSYYELGVNIFGGCCGTTPEHVKLFRKVLGN 289 (566)
T ss_dssp HHHHHHHHHHHTC-CSEEEEECCSSSCEEETTEEEC--CCCHHHHHTTHHHHHHTTCSEECCCTTCCHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHhcC-CCEEEEEcCCCCCcccCCcccc--CCCHHHHHHHHHHHHHcCCcEEccccCCCHHHHHHHHHHhcC
Confidence 9999999999876 699999999998874332 235 456899999999999999999999999999999999999998
Q ss_pred ccCCC
Q psy15811 575 FNTKK 579 (581)
Q Consensus 575 ~~~~~ 579 (581)
++|+.
T Consensus 290 ~~p~~ 294 (566)
T 1q7z_A 290 RKPLQ 294 (566)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 88764
No 4
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=100.00 E-value=4.1e-54 Score=476.62 Aligned_cols=258 Identities=22% Similarity=0.302 Sum_probs=227.8
Q ss_pred CceEEEeccHHHHHhhCcCCCCCCCCCccccccCCChHHHHHHHHHHHHhccccccccccccccccHhhcCCCHHHHHHH
Q psy15811 5 CKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDL 84 (581)
Q Consensus 5 ~~ili~DGamgT~L~~~~g~~~~~~~~ws~~~~l~~Pe~v~~iH~~yl~AGAdiI~TnTf~a~~~~l~~~g~~~~~~~~i 84 (581)
++++|+||||||+|+++ |++. ++ +.|++++||.|+++|++|++||||||+|||||+|+.+|.++|+ ++++++|
T Consensus 13 ~~ililDGamGT~L~~~-g~~~--~~---el~~l~~Pe~V~~iH~~Yl~AGAdii~TnTf~a~~~~l~~~g~-~~~~~el 85 (566)
T 1q7z_A 13 ERVLLLDGAYGTEFMKY-GYDD--LP---EELNIKAPDVVLKVHRSYIESGSDVILTNTFGATRMKLRKHGL-EDKLDPI 85 (566)
T ss_dssp HCCEECCCCSHHHHHHT-TCCS--CG---GGHHHHCHHHHHHHHHHHHHHTCSEEECSCTTCSHHHHGGGTC-GGGHHHH
T ss_pred CCeEEEEChHHHHHHHC-CCCC--Cc---hhhcccCHHHHHHHHHHHHHhhcceeecCcccCCHHHHHhcCc-hHHHHHH
Confidence 36899999999999998 9864 33 3457999999999999999999999999999999999999999 5899999
Q ss_pred HHHHHHHHHHHhhhhcCCCcccccccccccCCCeEEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
Q psy15811 85 LHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA 164 (581)
Q Consensus 85 ~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~~~~~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~ 164 (581)
|++|++|||+|+++ + +|||||||+|+.+.+ .+.+++++++++|++|+++|+++
T Consensus 86 ~~~av~lAr~a~~~------------------~-~VAGsiGP~g~~~~~--------~~~~~~~e~~~~~~~qi~~l~~~ 138 (566)
T 1q7z_A 86 VRNAVRIARRAAGE------------------K-LVFGDIGPTGELPYP--------LGSTLFEEFYENFRETVEIMVEE 138 (566)
T ss_dssp HHHHHHHHHHHHTT------------------S-EEEEEECCCSCCBTT--------TSSBCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhC------------------C-eEEEeCCCcccCCCC--------CCCCCHHHHHHHHHHHHHHHHhC
Confidence 99999999999875 6 899999999997632 24689999999999999999999
Q ss_pred CCcEEEEEccCCHHHHHHHHHHHHh-cCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC-ChhhHH
Q psy15811 165 GVDYLALETIPAEKEALALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV-RPSHVS 242 (581)
Q Consensus 165 gvD~l~~ET~~~~~E~~aa~~a~~~-~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~-~p~~~~ 242 (581)
|||+|++|||+++.|+++++.++++ ++++|+|+|||++++|++++|+++++++..+. ..++++||+||+ +|++|.
T Consensus 139 gvD~l~~ET~~~~~Ea~aa~~a~~~~~~~~Pv~vS~t~~~~g~~~~G~~~~~~~~~l~---~~~~~avG~NC~~gp~~~~ 215 (566)
T 1q7z_A 139 GVDGIIFETFSDILELKAAVLAAREVSRDVFLIAHMTFDEKGRSLTGTDPANFAITFD---ELDIDALGINCSLGPEEIL 215 (566)
T ss_dssp TCSEEEEEEECCHHHHHHHHHHHHHHCSSSCEEEEECCCTTSCCTTSCCHHHHHHHHH---TSSCSEEEEESSSCHHHHH
T ss_pred CCCEEEEeccCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCeeCCCCcHHHHHHHhh---ccCCCEEEEeCCCCHHHHH
Confidence 9999999999999999999999997 36999999999999999999999999999886 467999999997 999999
Q ss_pred HHHHHHHhhCCCCceEEecCCCcccc-CCC---------chh---hhccccCcccCCCCcccccccCCChHHHHHHHH
Q psy15811 243 TLVRCIKQSHPTVQTIVYPNKGVKLL-DGS---------FTS---QVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307 (581)
Q Consensus 243 ~~l~~l~~~~~~~p~~~~pnag~~~~-dG~---------~gt---~L~~~~g~~~~g~~lws~~~~~~~Pe~v~~vh~ 307 (581)
++|+.+.+. +++|+++|||+|.+.+ ||. |+. ++.+. |..+.|+| |.++|+||+++.+
T Consensus 216 ~~l~~l~~~-~~~p~~vyPNaG~p~~~~~~~~~~~~p~~~a~~~~~~~~~-G~~iiGGC------CGTtP~hI~aia~ 285 (566)
T 1q7z_A 216 PIFQELSQY-TDKFLVVEPNAGKPIVENGKTVYPLKPHDFAVHIDSYYEL-GVNIFGGC------CGTTPEHVKLFRK 285 (566)
T ss_dssp HHHHHHHHT-CCSEEEEECCSSSCEEETTEEECCCCHHHHHTTHHHHHHT-TCSEECCC------TTCCHHHHHHHHH
T ss_pred HHHHHHHhc-CCCEEEEEcCCCCCcccCCccccCCCHHHHHHHHHHHHHc-CCcEEccc------cCCCHHHHHHHHH
Confidence 999999985 8999999999995543 332 222 22333 77777898 9999999999844
No 5
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=93.81 E-value=0.59 Score=46.93 Aligned_cols=106 Identities=11% Similarity=0.085 Sum_probs=75.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhc--CCCcEEEEEEEcCCCcCCCCCCHH
Q psy15811 143 DSMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELIS 214 (581)
Q Consensus 143 ~~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~--~~~pv~isft~~~~g~l~~G~~~~ 214 (581)
+.++++. +++.++.+++.|||.|++ |.. -+.+|=+.+++.+.+. ..+||++.. .+.+..
T Consensus 17 g~iD~~~----l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~ 83 (292)
T 2ojp_A 17 GNVCRAS----LKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGT---------GANATA 83 (292)
T ss_dssp SCBCHHH----HHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHH
T ss_pred CCcCHHH----HHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCccHH
Confidence 3577654 456777788899999876 532 3677878888777643 358988733 234567
Q ss_pred HHHHHHHhhCCCCceEEEeCCC-----ChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 215 SAVTSCLLANPDQIQAIGVNCV-----RPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 215 ~~~~~~~~~~~~~~~~vGvNC~-----~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
++++.+..+...|++++.+-.- ..+.+....+.+... +++|+++|-+
T Consensus 84 ~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a-~~lPiilYn~ 135 (292)
T 2ojp_A 84 EAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEH-TDLPQILYNV 135 (292)
T ss_dssp HHHHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTT-CSSCEEEECC
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-cCCCEEEEeC
Confidence 8887776667889999988662 346677777777775 7899999943
No 6
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=93.60 E-value=0.56 Score=47.42 Aligned_cols=106 Identities=21% Similarity=0.163 Sum_probs=73.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhc--CCCcEEEEEEEcCCCcCCCCCCHH
Q psy15811 143 DSMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELIS 214 (581)
Q Consensus 143 ~~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~--~~~pv~isft~~~~g~l~~G~~~~ 214 (581)
+.++++. +++.++.+++.|||.|++ |.. -+.+|=+.+++.+.+. ..+||++.. .+.+..
T Consensus 32 g~iD~~~----l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~st~ 98 (304)
T 3cpr_A 32 GDIDIAA----GREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGV---------GTNNTR 98 (304)
T ss_dssp SCBCHHH----HHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEEC---------CCSCHH
T ss_pred CCcCHHH----HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecC---------CCCCHH
Confidence 3577654 566788888899999876 533 3677877777777643 358988733 234567
Q ss_pred HHHHHHHhhCCCCceEEEeCC-----CChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 215 SAVTSCLLANPDQIQAIGVNC-----VRPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 215 ~~~~~~~~~~~~~~~~vGvNC-----~~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
++++.+..+...|++++.+-. ...+.+....+.+... +++|+++|-+
T Consensus 99 ~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a-~~lPiilYn~ 150 (304)
T 3cpr_A 99 TSVELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAA-TEVPICLYDI 150 (304)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH-CCSCEEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-cCCCEEEEeC
Confidence 777665555568899888755 2356777777887776 7899999954
No 7
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=93.51 E-value=0.57 Score=47.33 Aligned_cols=105 Identities=12% Similarity=0.117 Sum_probs=73.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhc--CCCcEEEEEEEcCCCcCCCCCCHHH
Q psy15811 144 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISS 215 (581)
Q Consensus 144 ~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~--~~~pv~isft~~~~g~l~~G~~~~~ 215 (581)
.++++. +++.++.+++.|||.|++ |.. -+.+|=+.+++.+.+. ..+||++.. .+.+..+
T Consensus 29 ~iD~~~----l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv---------g~~~t~~ 95 (301)
T 1xky_A 29 NIDFAK----TTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGT---------GSNNTHA 95 (301)
T ss_dssp SBCHHH----HHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSCHHH
T ss_pred CcCHHH----HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCC---------CCCCHHH
Confidence 567654 566778888899999876 432 3677877877777643 358988733 2345667
Q ss_pred HHHHHHhhCCCCceEEEeCCC-----ChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 216 AVTSCLLANPDQIQAIGVNCV-----RPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 216 ~~~~~~~~~~~~~~~vGvNC~-----~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
+++.+..+...|++++.+-.- ..+.+.+..+.+... +++|+++|-+
T Consensus 96 ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a-~~lPiilYn~ 146 (301)
T 1xky_A 96 SIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAES-TPLPVMLYNV 146 (301)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHT-CSSCEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh-cCCCEEEEeC
Confidence 776655555688999888652 356777777787775 7899999943
No 8
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=93.17 E-value=0.55 Score=47.66 Aligned_cols=105 Identities=13% Similarity=0.123 Sum_probs=73.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhc--CCCcEEEEEEEcCCCcCCCCCCHH
Q psy15811 143 DSMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELIS 214 (581)
Q Consensus 143 ~~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~--~~~pv~isft~~~~g~l~~G~~~~ 214 (581)
+.++++. +++.++.+++.|||.|++ |.. -+.+|=+.+++.+.+. ..+||++.. .+.+..
T Consensus 24 g~iD~~~----l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~ 90 (309)
T 3fkr_A 24 GDLDLAS----QKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTT---------SHYSTQ 90 (309)
T ss_dssp SSBCHHH----HHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHH
T ss_pred CCcCHHH----HHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCchHH
Confidence 3577654 566778888999998776 322 2677877788777653 358998743 234566
Q ss_pred HHHHHHHhhCCCCceEEEeCC--------CChhhHHHHHHHHHhhCCCCceEEec
Q psy15811 215 SAVTSCLLANPDQIQAIGVNC--------VRPSHVSTLVRCIKQSHPTVQTIVYP 261 (581)
Q Consensus 215 ~~~~~~~~~~~~~~~~vGvNC--------~~p~~~~~~l~~l~~~~~~~p~~~~p 261 (581)
++++.+..+...|++++.+=. ...+.+....+.+... .++|+++|=
T Consensus 91 ~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a-~~lPiilYn 144 (309)
T 3fkr_A 91 VCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDA-IAIPIMVQD 144 (309)
T ss_dssp HHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHH-CSSCEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHh-cCCCEEEEe
Confidence 777665555568899988854 2457777888888876 789999993
No 9
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=93.05 E-value=0.66 Score=46.63 Aligned_cols=105 Identities=14% Similarity=0.048 Sum_probs=72.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhc--CCCcEEEEEEEcCCCcCCCCCCHHH
Q psy15811 144 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISS 215 (581)
Q Consensus 144 ~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~--~~~pv~isft~~~~g~l~~G~~~~~ 215 (581)
.++++ .+++.++.+++.|||.|++ |.. -+.+|=+.+++.+.+. ..+||++.. .+.+..+
T Consensus 17 ~iD~~----~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~ 83 (294)
T 2ehh_A 17 EVDYE----ALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGT---------GGNATHE 83 (294)
T ss_dssp EECHH----HHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---------CCSCHHH
T ss_pred CcCHH----HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHH
Confidence 46654 4566788888999999876 432 3677877777777643 358888633 2345677
Q ss_pred HHHHHHhhCCCCceEEEeCCC-----ChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 216 AVTSCLLANPDQIQAIGVNCV-----RPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 216 ~~~~~~~~~~~~~~~vGvNC~-----~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
+++.+..+...|++++.+-.- ..+.+....+.+... +++|+++|-+
T Consensus 84 ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a-~~lPiilYn~ 134 (294)
T 2ehh_A 84 AVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQE-VDIPIIIYNI 134 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH-CCSCEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-cCCCEEEEeC
Confidence 776655555688999888652 356777777787776 7899999943
No 10
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=93.01 E-value=0.57 Score=47.42 Aligned_cols=105 Identities=14% Similarity=0.049 Sum_probs=72.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhc--CCCcEEEEEEEcCCCcCCCCCCHHH
Q psy15811 144 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISS 215 (581)
Q Consensus 144 ~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~--~~~pv~isft~~~~g~l~~G~~~~~ 215 (581)
.++++ .++..++.+++.|||.|++ |.. -+.+|=+.+++.+.+. ..+||++.. .+.+..+
T Consensus 29 ~iD~~----~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv---------g~~st~~ 95 (306)
T 1o5k_A 29 ELDLE----SYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGA---------GTNSTEK 95 (306)
T ss_dssp EECHH----HHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSCHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcC---------CCccHHH
Confidence 46654 4566788888999999876 432 3677878888777643 358988743 2335667
Q ss_pred HHHHHHhhCCCCceEEEeCC-----CChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 216 AVTSCLLANPDQIQAIGVNC-----VRPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 216 ~~~~~~~~~~~~~~~vGvNC-----~~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
+++.+..+...|++++.+-. ...+.+....+.+... +++|+++|-+
T Consensus 96 ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a-~~lPiilYn~ 146 (306)
T 1o5k_A 96 TLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISER-TDLGIVVYNV 146 (306)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTT-CSSCEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-CCCCEEEEeC
Confidence 77665544467889888865 2356677777777775 7899999943
No 11
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=92.90 E-value=0.48 Score=47.65 Aligned_cols=105 Identities=14% Similarity=0.074 Sum_probs=73.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhc--CCCcEEEEEEEcCCCcCCCCCCHHH
Q psy15811 144 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISS 215 (581)
Q Consensus 144 ~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~--~~~pv~isft~~~~g~l~~G~~~~~ 215 (581)
.++++. +++.++.+++.|||.|++ |.. -+.+|=+.+++.+.+. ..+||++.. .+.+..+
T Consensus 17 ~iD~~~----l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~ 83 (292)
T 2vc6_A 17 RIDEVA----LHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGA---------GSNSTAE 83 (292)
T ss_dssp EECHHH----HHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSHHH
T ss_pred CcCHHH----HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCccHHH
Confidence 466644 566788888899999875 432 3677877888777643 358988743 2335567
Q ss_pred HHHHHHhhCCCCceEEEeCCC-----ChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 216 AVTSCLLANPDQIQAIGVNCV-----RPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 216 ~~~~~~~~~~~~~~~vGvNC~-----~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
+++.+..+...|++++.+..- ..+.+....+.+... +++|+++|-+
T Consensus 84 ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a-~~lPiilYn~ 134 (292)
T 2vc6_A 84 AIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAA-STIPIIVYNI 134 (292)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH-CSSCEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh-CCCCEEEEeC
Confidence 776655555689999998773 346777777788776 7899999943
No 12
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=92.67 E-value=0.69 Score=47.41 Aligned_cols=106 Identities=11% Similarity=0.066 Sum_probs=73.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhc--CCCcEEEEEEEcCCCcCCCCCCHH
Q psy15811 143 DSMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELIS 214 (581)
Q Consensus 143 ~~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~--~~~pv~isft~~~~g~l~~G~~~~ 214 (581)
+.++++. ++..++.+++.|||.|++ |.. -+.+|=+.+++.+.+. ..+||++... +.+..
T Consensus 50 g~iD~~~----l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg---------~~st~ 116 (332)
T 2r8w_A 50 GRVDIEA----FSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIG---------ALRTD 116 (332)
T ss_dssp CCBCHHH----HHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC---------CSSHH
T ss_pred CCcCHHH----HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CCCHH
Confidence 3577654 466777788899999876 432 3677878888777643 3589987442 23456
Q ss_pred HHHHHHHhhCCCCceEEEeCCC-----ChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 215 SAVTSCLLANPDQIQAIGVNCV-----RPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 215 ~~~~~~~~~~~~~~~~vGvNC~-----~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
++++.+..+...|++++.+-.- ..+.+....+.+... +++||++|-+
T Consensus 117 eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a-~~lPiilYn~ 168 (332)
T 2r8w_A 117 EAVALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGA-TALPLAIYNN 168 (332)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHH-CSSCEEEECC
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-cCCCEEEEeC
Confidence 6766554444678999988662 346677777777776 7899999943
No 13
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=92.49 E-value=0.76 Score=46.05 Aligned_cols=105 Identities=10% Similarity=0.078 Sum_probs=72.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhc--CCCcEEEEEEEcCCCcCCCCCCHHH
Q psy15811 144 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISS 215 (581)
Q Consensus 144 ~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~--~~~pv~isft~~~~g~l~~G~~~~~ 215 (581)
.++++ .+++.++.+++.|||.|++ |.. -+.+|=+.+++.+.+. ..+||++.. .+.+..+
T Consensus 17 ~iD~~----~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~ 83 (289)
T 2yxg_A 17 EVDFD----GLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGA---------GSNCTEE 83 (289)
T ss_dssp EECHH----HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---------CCSSHHH
T ss_pred CcCHH----HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCCCHHH
Confidence 46654 4566788888999999876 433 3677877777777643 358888733 2335567
Q ss_pred HHHHHHhhCCCCceEEEeCCC-----ChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 216 AVTSCLLANPDQIQAIGVNCV-----RPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 216 ~~~~~~~~~~~~~~~vGvNC~-----~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
+++.+..+...|++++.+-.- ..+.+....+.+... +++|+++|-+
T Consensus 84 ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a-~~lPiilYn~ 134 (289)
T 2yxg_A 84 AIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAES-INLPIVLYNV 134 (289)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHH-CSSCEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-cCCCEEEEeC
Confidence 766555444678998888652 346777777887776 7899999943
No 14
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=92.47 E-value=1.4 Score=42.73 Aligned_cols=66 Identities=15% Similarity=0.172 Sum_probs=45.2
Q ss_pred HHHHHHHHHHCCCcEEEEEccC--CHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEE
Q psy15811 154 HRPNVEALVRAGVDYLALETIP--AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 231 (581)
Q Consensus 154 ~~~q~~~l~~~gvD~l~~ET~~--~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~v 231 (581)
+.+|++.+++.|+|++++-+-. +..+....++.+++. +++++++. .+.+++... . ..|++.|
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~-g~~v~~~v-----------~t~eea~~a-~---~~Gad~I 153 (232)
T 3igs_A 90 FLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHH-HLLTMADC-----------SSVDDGLAC-Q---RLGADII 153 (232)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT-TCEEEEEC-----------CSHHHHHHH-H---HTTCSEE
T ss_pred cHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHC-CCEEEEeC-----------CCHHHHHHH-H---hCCCCEE
Confidence 3457777889999999887642 335667777788775 78777632 235555433 3 4789999
Q ss_pred EeCC
Q psy15811 232 GVNC 235 (581)
Q Consensus 232 GvNC 235 (581)
|+|-
T Consensus 154 g~~~ 157 (232)
T 3igs_A 154 GTTM 157 (232)
T ss_dssp ECTT
T ss_pred EEcC
Confidence 9764
No 15
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=92.22 E-value=0.7 Score=47.60 Aligned_cols=106 Identities=15% Similarity=0.170 Sum_probs=73.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhc--CCCcEEEEEEEcCCCcCCCCCCHH
Q psy15811 143 DSMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELIS 214 (581)
Q Consensus 143 ~~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~--~~~pv~isft~~~~g~l~~G~~~~ 214 (581)
+.++++. +++.++.+++.|||.|++ |.. -+.+|=+.+++.+.+. ..+||++.. .+.+..
T Consensus 47 g~ID~~~----l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv---------g~~st~ 113 (343)
T 2v9d_A 47 GQLDKPG----TAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGT---------GGTNAR 113 (343)
T ss_dssp SSBCHHH----HHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CSSCHH
T ss_pred CCcCHHH----HHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHH
Confidence 3577654 566788888899999876 532 3677877888777643 358988743 234566
Q ss_pred HHHHHHHhhCCCCceEEEeCCC-----ChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 215 SAVTSCLLANPDQIQAIGVNCV-----RPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 215 ~~~~~~~~~~~~~~~~vGvNC~-----~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
++++.+..+...|++++.+-.- ..+.+....+.+... +++||++|-+
T Consensus 114 eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a-~~lPiilYn~ 165 (343)
T 2v9d_A 114 ETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADS-VTLPVMLYNF 165 (343)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHT-CSSCEEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-cCCCEEEEeC
Confidence 7776655445678998888662 356777777787775 7899999943
No 16
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=92.09 E-value=0.95 Score=45.65 Aligned_cols=104 Identities=14% Similarity=0.134 Sum_probs=73.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCcEEEE-----EccC-CHHHHHHHHHHHHhc--C-CCcEEEEEEEcCCCcCCCCCCHH
Q psy15811 144 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREF--P-GQKAWLSFSCKDDTHTSHGELIS 214 (581)
Q Consensus 144 ~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~~-~~~E~~aa~~a~~~~--~-~~pv~isft~~~~g~l~~G~~~~ 214 (581)
.++++. ++..++.+++.|||.|++ |... +.+|=+.+++.+.+. . .+||++.. .+.+..
T Consensus 24 ~iD~~~----l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGv---------g~~~t~ 90 (301)
T 3m5v_A 24 KVDEQS----YARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGA---------GSNATH 90 (301)
T ss_dssp EECHHH----HHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEEC---------CCSSHH
T ss_pred CCCHHH----HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeC---------CCCCHH
Confidence 567654 566778888999999876 3221 677878888777643 3 58988743 234567
Q ss_pred HHHHHHHhhCCCCceEEEeCCC-----ChhhHHHHHHHHHhhCCCCceEEec
Q psy15811 215 SAVTSCLLANPDQIQAIGVNCV-----RPSHVSTLVRCIKQSHPTVQTIVYP 261 (581)
Q Consensus 215 ~~~~~~~~~~~~~~~~vGvNC~-----~p~~~~~~l~~l~~~~~~~p~~~~p 261 (581)
++++.+..+...|++++.+-.- ..+.+....+.+... +++|+++|-
T Consensus 91 ~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a-~~lPiilYn 141 (301)
T 3m5v_A 91 EAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQS-VDIPVLLYN 141 (301)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH-CSSCEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh-CCCCEEEEe
Confidence 7776665555688999888662 346777778888776 799999994
No 17
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=92.05 E-value=0.58 Score=46.96 Aligned_cols=104 Identities=10% Similarity=0.082 Sum_probs=69.6
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhc--CCCcEEEEEEEcCCCcCCCCCCHHHH
Q psy15811 145 MTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISSA 216 (581)
Q Consensus 145 ~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~--~~~pv~isft~~~~g~l~~G~~~~~~ 216 (581)
++++. +++.++.+++.|||.|++ |.. -+.+|=+.+++.+.+. ..+||++.. .+.+..++
T Consensus 19 iD~~~----l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gv---------g~~~t~~a 85 (291)
T 3a5f_A 19 VDFDK----LSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGT---------GSNNTAAS 85 (291)
T ss_dssp BCHHH----HHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHH----HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CcccHHHH
Confidence 66644 566788888899999876 532 3677877777777643 358988743 23456677
Q ss_pred HHHHHhhCCCCceEEEeCCC-----ChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 217 VTSCLLANPDQIQAIGVNCV-----RPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 217 ~~~~~~~~~~~~~~vGvNC~-----~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
++.+..+...|++++.+-.- ..+.+....+.+... +++|+++|-+
T Consensus 86 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a-~~lPiilYn~ 135 (291)
T 3a5f_A 86 IAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDA-VSTPIIIYNV 135 (291)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGG-CCSCEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh-cCCCEEEEeC
Confidence 76655555688999988662 345555555666664 7899999943
No 18
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=92.01 E-value=1.2 Score=44.80 Aligned_cols=118 Identities=13% Similarity=0.103 Sum_probs=79.7
Q ss_pred EEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEE-----EccC-CHHHHHHHHHHHHhc--
Q psy15811 119 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREF-- 190 (581)
Q Consensus 119 ~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~~-~~~E~~aa~~a~~~~-- 190 (581)
++..-+-|+.+ .+.++++. ++++++.+++.|||.|++ |... +.+|=+.+++.+.+.
T Consensus 11 v~~a~vTPf~~------------dg~iD~~~----l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~ 74 (297)
T 3flu_A 11 SLVALITPMNQ------------DGSIHYEQ----LRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVA 74 (297)
T ss_dssp EEEECCCCBCT------------TSCBCHHH----HHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT
T ss_pred eEEeeeccCCC------------CCCcCHHH----HHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhC
Confidence 44556667654 13577654 566788888999998876 3221 677888888777643
Q ss_pred CCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCC-----CChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 191 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-----VRPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 191 ~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC-----~~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
..+||++.. .+.+..++++.+..+...|++++.+-. ...+.+....+.+... .++|+++|=+
T Consensus 75 grvpviaGv---------g~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a-~~lPiilYn~ 141 (297)
T 3flu_A 75 KRVPVIAGT---------GANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEA-TSIPMIIYNV 141 (297)
T ss_dssp TSSCEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH-CCSCEEEEEC
T ss_pred CCCcEEEeC---------CCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-CCCCEEEEEC
Confidence 358998743 234567777665555568889888765 1346677777888776 7899999943
No 19
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=92.01 E-value=0.71 Score=46.50 Aligned_cols=105 Identities=16% Similarity=0.075 Sum_probs=72.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhc--CCCcEEEEEEEcCCCcCCCCCCHHH
Q psy15811 144 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISS 215 (581)
Q Consensus 144 ~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~--~~~pv~isft~~~~g~l~~G~~~~~ 215 (581)
.++++. +++.++.+++.|||.|++ |.. -+.+|=+.+++.+.+. ..+||++.. .+.+..+
T Consensus 17 ~iD~~~----l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~ 83 (297)
T 2rfg_A 17 QVDEKA----LAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGA---------GSNNPVE 83 (297)
T ss_dssp EECHHH----HHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSHHH
T ss_pred CcCHHH----HHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcc---------CCCCHHH
Confidence 466644 566788888899999875 432 3677877777777643 358988743 2345667
Q ss_pred HHHHHHhhCCCCceEEEeCCC-----ChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 216 AVTSCLLANPDQIQAIGVNCV-----RPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 216 ~~~~~~~~~~~~~~~vGvNC~-----~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
+++.+..+...|++++.+-.- ..+.+....+.+... +++|+++|-+
T Consensus 84 ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a-~~lPiilYn~ 134 (297)
T 2rfg_A 84 AVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDA-IDIPIIVYNI 134 (297)
T ss_dssp HHHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHH-CSSCEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh-cCCCEEEEeC
Confidence 776555444678999988762 346677777777776 7899999943
No 20
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=91.93 E-value=0.9 Score=46.18 Aligned_cols=118 Identities=17% Similarity=0.167 Sum_probs=81.1
Q ss_pred EEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEE-----EccC-CHHHHHHHHHHHHhc--
Q psy15811 119 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREF-- 190 (581)
Q Consensus 119 ~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~~-~~~E~~aa~~a~~~~-- 190 (581)
+++.-+-|+.+ .+.++++. ++++++.+++.|||.|++ |... +.+|=+.+++.+.+.
T Consensus 28 v~~a~vTPf~~------------dg~iD~~~----l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~ 91 (315)
T 3na8_A 28 IIGYTITPFAA------------DGGLDLPA----LGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVA 91 (315)
T ss_dssp EEEECCCCBCT------------TSSBCHHH----HHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHT
T ss_pred eEEEeeCcCCC------------CCCcCHHH----HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC
Confidence 45556667654 13577654 567788888999998874 4222 677888888777653
Q ss_pred CCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC-----ChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 191 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV-----RPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 191 ~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~-----~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
..+||++.. .+.+..++++.+..+...|++++.+-.- ..+.+....+.+... .++|+++|-+
T Consensus 92 grvpViaGv---------g~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a-~~lPiilYn~ 158 (315)
T 3na8_A 92 HRVPTIVSV---------SDLTTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEA-IGVPVMLYNN 158 (315)
T ss_dssp TSSCBEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHH-CSSCEEEEEC
T ss_pred CCCcEEEec---------CCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-CCCcEEEEeC
Confidence 358998743 2345677776665555689999998762 356777777888776 7899999943
No 21
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=91.90 E-value=0.78 Score=46.33 Aligned_cols=118 Identities=17% Similarity=0.141 Sum_probs=79.3
Q ss_pred EEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhc--
Q psy15811 119 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREF-- 190 (581)
Q Consensus 119 ~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~-- 190 (581)
++..-+-|+.. .+.++++. +++.++.+++.|||.|++ |.. -+.+|=+.+++.+.+.
T Consensus 15 v~~a~vTPF~~------------dg~iD~~~----l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~ 78 (303)
T 2wkj_A 15 VMAALLTPFDQ------------QQALDKAS----LRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAK 78 (303)
T ss_dssp EEEECCCCBCT------------TSSBCHHH----HHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT
T ss_pred eEEeeEcCCCC------------CCCcCHHH----HHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhC
Confidence 44556777654 13566654 566788888899999876 432 3677878888777643
Q ss_pred CCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC-----ChhhHHHHHHHHHhhCCC-CceEEecC
Q psy15811 191 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV-----RPSHVSTLVRCIKQSHPT-VQTIVYPN 262 (581)
Q Consensus 191 ~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~-----~p~~~~~~l~~l~~~~~~-~p~~~~pn 262 (581)
..+||++.. .+.+..++++.+..+...|++++.+-.- ..+.+....+.+... ++ +|+++|-+
T Consensus 79 grvpViaGv---------g~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a-~~~lPiilYn~ 146 (303)
T 2wkj_A 79 GKIKLIAHV---------GCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDS-ADGLPMVVYNI 146 (303)
T ss_dssp TTSEEEEEC---------CCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHH-HTTCCEEEEEC
T ss_pred CCCcEEEec---------CCCCHHHHHHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHh-CCCCCEEEEeC
Confidence 358988733 2235667776555444678998888652 346677777777775 66 99999943
No 22
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=91.77 E-value=1.2 Score=44.72 Aligned_cols=106 Identities=11% Similarity=0.050 Sum_probs=73.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhcC--CCcEEEEEEEcCCCcCCCCCCHH
Q psy15811 143 DSMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREFP--GQKAWLSFSCKDDTHTSHGELIS 214 (581)
Q Consensus 143 ~~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~~--~~pv~isft~~~~g~l~~G~~~~ 214 (581)
+.++++. +++.++.+++.|||.|++ |.. -+.+|=+.+++.+.+.. .+||++.. .+.+..
T Consensus 19 g~iD~~~----l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~ 85 (294)
T 3b4u_A 19 GTVDIDA----MIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGV---------LVDSIE 85 (294)
T ss_dssp SSBCHHH----HHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEE---------CCSSHH
T ss_pred CCcCHHH----HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCccHH
Confidence 3577654 566788888899999876 532 36778888888877542 48988754 223456
Q ss_pred HHHHHHHhhCCCCceEEEeCCC---C---hhhHHHHHHHHHhhCC---CCceEEecC
Q psy15811 215 SAVTSCLLANPDQIQAIGVNCV---R---PSHVSTLVRCIKQSHP---TVQTIVYPN 262 (581)
Q Consensus 215 ~~~~~~~~~~~~~~~~vGvNC~---~---p~~~~~~l~~l~~~~~---~~p~~~~pn 262 (581)
++++.+..+...|++++.+-.- . .+.+....+.+... + ++|+++|-+
T Consensus 86 ~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a-~p~~~lPiilYn~ 141 (294)
T 3b4u_A 86 DAADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSK-IGKDARDILVYNI 141 (294)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHH-HCTTCCCEEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHh-cCCCCCcEEEEEC
Confidence 7776655445688999988662 2 35666777777765 5 899999943
No 23
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=91.60 E-value=0.93 Score=45.52 Aligned_cols=106 Identities=13% Similarity=0.088 Sum_probs=72.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHH-CCCcEEEE-----Ecc-CCHHHHHHHHHHHHhc--CCCcEEEEEEEcCCCcCCCCCCH
Q psy15811 143 DSMTEADLIAWHRPNVEALVR-AGVDYLAL-----ETI-PAEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELI 213 (581)
Q Consensus 143 ~~~~~~~~~~~~~~q~~~l~~-~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~--~~~pv~isft~~~~g~l~~G~~~ 213 (581)
+.++++. +++.++.+++ .|||.|++ |.. -+.+|=+.+++.+.+. ..+||++.. .+.+.
T Consensus 19 g~iD~~~----l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t 85 (293)
T 1f6k_A 19 GTINEKG----LRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQV---------GSVNL 85 (293)
T ss_dssp SCBCHHH----HHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---------CCSCH
T ss_pred CCcCHHH----HHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEec---------CCCCH
Confidence 3577654 5667888888 99999876 422 3677777777777643 358888743 23356
Q ss_pred HHHHHHHHhhCCCCceEEEeCCC-----ChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 214 SSAVTSCLLANPDQIQAIGVNCV-----RPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 214 ~~~~~~~~~~~~~~~~~vGvNC~-----~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
.++++.+..+...|++++.+-.- ..+.+....+.+... +++|+++|-+
T Consensus 86 ~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a-~~lPiilYn~ 138 (293)
T 1f6k_A 86 KEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAE-TGSNMIVYSI 138 (293)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHH-HCCCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-CCCCEEEEEC
Confidence 67776655444678898888652 346677777777775 7899999943
No 24
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=91.51 E-value=1.1 Score=45.44 Aligned_cols=106 Identities=11% Similarity=0.066 Sum_probs=73.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhc--CCCcEEEEEEEcCCCcCCCCCCHH
Q psy15811 143 DSMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELIS 214 (581)
Q Consensus 143 ~~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~--~~~pv~isft~~~~g~l~~G~~~~ 214 (581)
+.++++. +++.++.+++.|||.|++ |.. -+.+|=+.+++.+.+. ..+||++.. .+.+..
T Consensus 39 g~iD~~~----l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---------g~~st~ 105 (314)
T 3qze_A 39 GRLDWDS----LAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGT---------GANSTR 105 (314)
T ss_dssp SCBCHHH----HHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHH
T ss_pred CCcCHHH----HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCcCHH
Confidence 3577654 566777888899998876 322 2677878887777643 358998733 234567
Q ss_pred HHHHHHHhhCCCCceEEEeCCC-----ChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 215 SAVTSCLLANPDQIQAIGVNCV-----RPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 215 ~~~~~~~~~~~~~~~~vGvNC~-----~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
++++.+..+...|++++.+=.- ..+.+....+.+... +++|+++|=+
T Consensus 106 eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a-~~lPiilYn~ 157 (314)
T 3qze_A 106 EAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEA-VAIPQILYNV 157 (314)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH-SCSCEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh-cCCCEEEEeC
Confidence 7776665555688998887651 346777788888776 7999999944
No 25
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=91.31 E-value=1 Score=45.64 Aligned_cols=108 Identities=14% Similarity=0.105 Sum_probs=74.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhc--CCCcEEEEEEEcCCCcCCCCCCHH
Q psy15811 143 DSMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELIS 214 (581)
Q Consensus 143 ~~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~--~~~pv~isft~~~~g~l~~G~~~~ 214 (581)
+.++++. +++.++.+++.|||.|++ |.. -+.+|=+.+++.+.+. ..+||++.. .+ +..
T Consensus 28 g~iD~~~----l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv---------g~-st~ 93 (314)
T 3d0c_A 28 REIDWKG----LDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGI---------GY-SVD 93 (314)
T ss_dssp CCBCHHH----HHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE---------CS-SHH
T ss_pred CCCCHHH----HHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecC---------Cc-CHH
Confidence 3577654 566778888899999864 322 3677777777777643 358998744 22 566
Q ss_pred HHHHHHHhhCCCCceEEEeCCC-----ChhhHHHHHHHHHhhCCCCceEEecCCCc
Q psy15811 215 SAVTSCLLANPDQIQAIGVNCV-----RPSHVSTLVRCIKQSHPTVQTIVYPNKGV 265 (581)
Q Consensus 215 ~~~~~~~~~~~~~~~~vGvNC~-----~p~~~~~~l~~l~~~~~~~p~~~~pnag~ 265 (581)
++++.+..+...|++++.+-.- ..+.+....+.+... +++|+++|=..|.
T Consensus 94 ~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a-~~lPiilYn~tg~ 148 (314)
T 3d0c_A 94 TAIELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEA-LDAPSIIYFKDAH 148 (314)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHH-SSSCEEEEECCTT
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-CCCCEEEEeCCCC
Confidence 7776655555689999988662 346677777777775 7899999963333
No 26
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=91.12 E-value=2.3 Score=41.10 Aligned_cols=66 Identities=21% Similarity=0.283 Sum_probs=45.3
Q ss_pred HHHHHHHHHHCCCcEEEEEccC--CHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEE
Q psy15811 154 HRPNVEALVRAGVDYLALETIP--AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 231 (581)
Q Consensus 154 ~~~q~~~l~~~gvD~l~~ET~~--~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~v 231 (581)
+.+|++.+.+.|+|++++-+-. +.+++...++.+++. +++++++. .+++++... . ..|++.|
T Consensus 90 ~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~-g~~v~~~v-----------~t~eea~~a-~---~~Gad~I 153 (229)
T 3q58_A 90 YLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLH-GLLAMADC-----------STVNEGISC-H---QKGIEFI 153 (229)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT-TCEEEEEC-----------SSHHHHHHH-H---HTTCSEE
T ss_pred cHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHC-CCEEEEec-----------CCHHHHHHH-H---hCCCCEE
Confidence 3467788889999999876542 345667777788775 78877632 245665443 3 4789999
Q ss_pred EeCC
Q psy15811 232 GVNC 235 (581)
Q Consensus 232 GvNC 235 (581)
|+|-
T Consensus 154 g~~~ 157 (229)
T 3q58_A 154 GTTL 157 (229)
T ss_dssp ECTT
T ss_pred EecC
Confidence 9763
No 27
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=91.10 E-value=2.3 Score=42.49 Aligned_cols=105 Identities=9% Similarity=0.106 Sum_probs=72.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHH
Q psy15811 143 DSMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSA 216 (581)
Q Consensus 143 ~~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~ 216 (581)
+.++++. +++.++.+++.|||.|++ |.. -+.+|=+.+++.+.+..+- |++.. .+.+..++
T Consensus 15 g~iD~~~----l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-ViaGv---------g~~~t~~a 80 (288)
T 2nuw_A 15 GKVNVDA----LKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK-LIFQV---------GSLNLNDV 80 (288)
T ss_dssp SCBCHHH----HHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC-EEEEC---------CCSCHHHH
T ss_pred CCcCHHH----HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-eEEee---------CCCCHHHH
Confidence 3567654 566778888899999876 533 3777888888888765322 44421 23456777
Q ss_pred HHHHHhhCCCCceEEEeCCC------ChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 217 VTSCLLANPDQIQAIGVNCV------RPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 217 ~~~~~~~~~~~~~~vGvNC~------~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
++.+..+...|++++.+-.- ..+.+....+.+... +++|+++|=+
T Consensus 81 i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a-~~lPiilYn~ 131 (288)
T 2nuw_A 81 MELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARI-SSHSLYIYNY 131 (288)
T ss_dssp HHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHH-CCSCEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHh-cCCCEEEEEC
Confidence 76665555789999988652 235667777777775 7899999954
No 28
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=90.96 E-value=4.4 Score=40.84 Aligned_cols=146 Identities=8% Similarity=0.033 Sum_probs=86.6
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-cccC-----CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHH
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLAL-ETIP-----AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISS 471 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~-ET~p-----~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~ 471 (581)
.++.+. ++..++.+.+.|||.|++ -|.. +.+|-+.+++.+.+. ..+||++.. .+.+..+
T Consensus 25 ~iD~~~----l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~ 91 (309)
T 3fkr_A 25 DLDLAS----QKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTT---------SHYSTQV 91 (309)
T ss_dssp SBCHHH----HHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHH
T ss_pred CcCHHH----HHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCchHHH
Confidence 355544 456677777899998766 2222 267777777777653 358999887 2346677
Q ss_pred HHHHHHhhCCCCceEEEECC-C-------CCccchHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHH
Q psy15811 472 AVTSCLLANPDQIQAIGVNC-V-------RPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYV 543 (581)
Q Consensus 472 ~~~~l~~~~~~~~~~iGiNC-~-------~p~~~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~ 543 (581)
+++..+.....+++++.+-. . +.+.+....+.+.... ++|+++|-+-+ + + .+.+++.+.+.+
T Consensus 92 ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~-~lPiilYn~P~-----t--g--~~l~~~~~~~La 161 (309)
T 3fkr_A 92 CAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAI-AIPIMVQDAPA-----S--G--TALSAPFLARMA 161 (309)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHC-SSCEEEEECGG-----G--C--CCCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhc-CCCEEEEeCCC-----C--C--CCCCHHHHHHHH
Confidence 77766555566888877754 1 2233555567777766 79999997642 1 0 123344444433
Q ss_pred HHHHHcCCcEEeec--CCCchHHHHHHHHHH
Q psy15811 544 PQWLEEGVNIIGGC--CEVTSYEIQQMRIMI 572 (581)
Q Consensus 544 ~~w~~~G~~iiGGC--CGt~P~hI~al~~~l 572 (581)
++ --+|+|== |+.+-.+++++.+..
T Consensus 162 ~~----~pnIvgiK~~~~~~~~~~~~~~~~~ 188 (309)
T 3fkr_A 162 RE----IEQVAYFXIETPGAANKLRELIRLG 188 (309)
T ss_dssp HH----STTEEEEEECSSSHHHHHHHHHHHH
T ss_pred hh----CCCEEEEECCCcchHHHHHHHHHhc
Confidence 22 34566632 333455666665543
No 29
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=90.86 E-value=1.4 Score=44.51 Aligned_cols=106 Identities=11% Similarity=0.019 Sum_probs=73.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhc--CCCcEEEEEEEcCCCcCCCCCCHH
Q psy15811 143 DSMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELIS 214 (581)
Q Consensus 143 ~~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~--~~~pv~isft~~~~g~l~~G~~~~ 214 (581)
+.++++ .+++.++.+++.|||.|++ |.. -+.+|=+.+++.+.+. ..+||++.. .+.+..
T Consensus 30 g~iD~~----~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~ 96 (307)
T 3s5o_A 30 AEVDYG----KLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGS---------GCESTQ 96 (307)
T ss_dssp SCBCHH----HHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEEC---------CCSSHH
T ss_pred CCcCHH----HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEec---------CCCCHH
Confidence 357765 4567788888999999875 322 2677888888888764 358888733 224566
Q ss_pred HHHHHHHhhCCCCceEEEeCCC-------ChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 215 SAVTSCLLANPDQIQAIGVNCV-------RPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 215 ~~~~~~~~~~~~~~~~vGvNC~-------~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
++++.+..+...|++++.+-.- ..+.+.+..+.+... +++|+++|-+
T Consensus 97 ~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a-~~lPiilYn~ 150 (307)
T 3s5o_A 97 ATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADL-SPIPVVLYSV 150 (307)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHH-CSSCEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhh-cCCCEEEEeC
Confidence 7776555555688999988542 235677777888776 7899999944
No 30
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=90.68 E-value=1.9 Score=43.51 Aligned_cols=106 Identities=21% Similarity=0.162 Sum_probs=69.9
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cccC-CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHH
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISS 471 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~-----ET~p-~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~ 471 (581)
.++.+. ++..++.+.+.|||.|++ |... +.+|-+.+++.+.+. ..+||++.. .+.+..+
T Consensus 33 ~iD~~~----l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~st~~ 99 (304)
T 3cpr_A 33 DIDIAA----GREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGV---------GTNNTRT 99 (304)
T ss_dssp CBCHHH----HHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEEC---------CCSCHHH
T ss_pred CcCHHH----HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecC---------CCCCHHH
Confidence 355544 456677777899999876 4322 266777777776643 358999877 2456777
Q ss_pred HHHHHHhhCCCCceEEEECC---C--CCccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 472 AVTSCLLANPDQIQAIGVNC---V--RPSHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 472 ~~~~l~~~~~~~~~~iGiNC---~--~p~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
+++..+.....+++++.+-. . +.+.+....+.+.... ++|+++|-+-
T Consensus 100 ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~-~lPiilYn~P 151 (304)
T 3cpr_A 100 SVELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAAT-EVPICLYDIP 151 (304)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-CSCEEEEECH
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEeCc
Confidence 77766555556788777655 1 2233555567777766 6999999873
No 31
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=90.63 E-value=1.5 Score=44.25 Aligned_cols=118 Identities=13% Similarity=0.142 Sum_probs=80.1
Q ss_pred EEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhc--
Q psy15811 119 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREF-- 190 (581)
Q Consensus 119 ~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~-- 190 (581)
++..-+-|+.. .+.++++. +++.++.+++.|||.|++ |.. -+.+|=+.+++.+.+.
T Consensus 19 v~~a~vTPf~~------------dg~iD~~~----l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~ 82 (304)
T 3l21_A 19 LLTAMVTPFSG------------DGSLDTAT----AARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVG 82 (304)
T ss_dssp EEEECCCCBCT------------TSCBCHHH----HHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT
T ss_pred eEEEEECCCCC------------CCCcCHHH----HHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhC
Confidence 45556677654 13577654 566788888899998775 322 1677888888777653
Q ss_pred CCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC-----ChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 191 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV-----RPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 191 ~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~-----~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
..+||++.. .+.+..++++.+..+...|++++.+-.- ..+.+....+.+... .++|+++|=+
T Consensus 83 grvpviaGv---------g~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a-~~lPiilYn~ 149 (304)
T 3l21_A 83 DRARVIAGA---------GTYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADA-TELPMLLYDI 149 (304)
T ss_dssp TTSEEEEEC---------CCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTS-CSSCEEEEEC
T ss_pred CCCeEEEeC---------CCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-cCCCEEEEeC
Confidence 358998843 2244667776655555678898888762 356777777888775 7899999943
No 32
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=90.62 E-value=1.6 Score=43.74 Aligned_cols=106 Identities=11% Similarity=0.020 Sum_probs=73.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCcEEEEE-ccC-----CHHHHHHHHHHHHhc--CCCcEEEEEEEcCCCcCCCCCCHH
Q psy15811 143 DSMTEADLIAWHRPNVEALVRAGVDYLALE-TIP-----AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELIS 214 (581)
Q Consensus 143 ~~~~~~~~~~~~~~q~~~l~~~gvD~l~~E-T~~-----~~~E~~aa~~a~~~~--~~~pv~isft~~~~g~l~~G~~~~ 214 (581)
+.++++. ++..++.+++.|||.|++= |-. +.+|=+.+++.+.+. ..+||++.. .+.+..
T Consensus 17 g~iD~~~----l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~ 83 (291)
T 3tak_A 17 GGVDWKS----LEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGT---------GANSTR 83 (291)
T ss_dssp SCBCHHH----HHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHH
T ss_pred CCcCHHH----HHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeC---------CCCCHH
Confidence 3577654 5667788888999987642 333 678888888877653 358988733 234567
Q ss_pred HHHHHHHhhCCCCceEEEeCC-----CChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 215 SAVTSCLLANPDQIQAIGVNC-----VRPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 215 ~~~~~~~~~~~~~~~~vGvNC-----~~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
++++.+..+...|++++.+-. ...+.+....+.+... +++|+++|-+
T Consensus 84 ~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a-~~lPiilYn~ 135 (291)
T 3tak_A 84 EAIELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEA-VELPLILYNV 135 (291)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHH-CCSCEEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh-cCCCEEEEec
Confidence 777665554567888888765 1346777777888776 7999999944
No 33
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=90.38 E-value=2.2 Score=42.77 Aligned_cols=105 Identities=12% Similarity=0.112 Sum_probs=70.5
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cccC-CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHH
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISS 471 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~-----ET~p-~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~ 471 (581)
.++.+.+ +..++.+.+.|||.|++ |... +.+|-+.+++.+.+. ..+||++.. .+.+..+
T Consensus 18 ~iD~~~l----~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~ 84 (292)
T 2ojp_A 18 NVCRASL----KKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGT---------GANATAE 84 (292)
T ss_dssp CBCHHHH----HHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHH
T ss_pred CcCHHHH----HHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCccHHH
Confidence 3565544 45666667789999876 3322 266777777776643 358999877 2346788
Q ss_pred HHHHHHhhCCCCceEEEECC-C----CCccchHHHHHHHhhCCCCeEEEeeC
Q psy15811 472 AVTSCLLANPDQIQAIGVNC-V----RPSHVSTLVRCIKQSHPTVQTIVYPN 518 (581)
Q Consensus 472 ~~~~l~~~~~~~~~~iGiNC-~----~p~~~~~~l~~l~~~~~~~pl~~ypN 518 (581)
+++..+.....+++++.+-. . +.+.+....+.+.... +.|+++|-+
T Consensus 85 ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~-~lPiilYn~ 135 (292)
T 2ojp_A 85 AISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHT-DLPQILYNV 135 (292)
T ss_dssp HHHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTC-SSCEEEECC
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEeC
Confidence 88877666677889877765 1 2233555566777766 699999986
No 34
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=90.31 E-value=1.3 Score=45.03 Aligned_cols=105 Identities=18% Similarity=0.137 Sum_probs=73.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCcEEEE-----E--ccCCHHHHHHHHHHHHhc--CCCcEEEEEEEcCCCcCCCCCCH
Q psy15811 143 DSMTEADLIAWHRPNVEALVRAGVDYLAL-----E--TIPAEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELI 213 (581)
Q Consensus 143 ~~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----E--T~~~~~E~~aa~~a~~~~--~~~pv~isft~~~~g~l~~G~~~ 213 (581)
+.++++. +++.++.+++.|||.|++ | |+ +.+|=+.+++.+.+. ..+||++.. .+.+.
T Consensus 38 g~iD~~~----l~~li~~li~~Gv~Gl~v~GtTGE~~~L-s~~Er~~v~~~~v~~~~grvpViaGv---------g~~st 103 (315)
T 3si9_A 38 GAIDEKA----FCNFVEWQITQGINGVSPVGTTGESPTL-THEEHKRIIELCVEQVAKRVPVVAGA---------GSNST 103 (315)
T ss_dssp SCBCHHH----HHHHHHHHHHTTCSEEECSSTTTTGGGS-CHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSH
T ss_pred CCcCHHH----HHHHHHHHHHcCCCEEEeCccccCcccc-CHHHHHHHHHHHHHHhCCCCcEEEeC---------CCCCH
Confidence 3577654 566788888999999873 2 22 577777777777643 358998743 23456
Q ss_pred HHHHHHHHhhCCCCceEEEeCC-----CChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 214 SSAVTSCLLANPDQIQAIGVNC-----VRPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 214 ~~~~~~~~~~~~~~~~~vGvNC-----~~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
.++++.+..+...|++++.+-. ...+.+....+.+... +++|+++|=+
T Consensus 104 ~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a-~~lPiilYn~ 156 (315)
T 3si9_A 104 SEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKA-ISIPIIIYNI 156 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH-CSSCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHc-CCCCEEEEeC
Confidence 7777665555568899888765 2356777788888776 7899999943
No 35
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=90.29 E-value=3.2 Score=41.49 Aligned_cols=104 Identities=15% Similarity=0.204 Sum_probs=71.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHH
Q psy15811 144 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAV 217 (581)
Q Consensus 144 ~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~ 217 (581)
.++++. +++.++.+++.|||.|++ |.. -+.+|=+.+++.+.+..+- |++.. .+.+..+++
T Consensus 16 ~iD~~~----l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g-viaGv---------g~~~t~~ai 81 (293)
T 1w3i_A 16 RIDKEK----LKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK-IIFQV---------GGLNLDDAI 81 (293)
T ss_dssp SBCHHH----HHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC-EEEEC---------CCSCHHHHH
T ss_pred CcCHHH----HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC-EEEec---------CCCCHHHHH
Confidence 567654 566778888899998876 422 3677888888888765332 44421 234567777
Q ss_pred HHHHhhCCCCceEEEeCCC---C---hhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 218 TSCLLANPDQIQAIGVNCV---R---PSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 218 ~~~~~~~~~~~~~vGvNC~---~---p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
+.+..+...|++++.+-.- . .+.+....+.+... +++|+++|-+
T Consensus 82 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a-~~lPiilYn~ 131 (293)
T 1w3i_A 82 RLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEV-SPHPVYLYNY 131 (293)
T ss_dssp HHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHH-CSSCEEEEEC
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhh-CCCCEEEEEC
Confidence 7666666789999888652 2 35667777777775 7899999943
No 36
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=90.21 E-value=2 Score=43.30 Aligned_cols=106 Identities=12% Similarity=0.119 Sum_probs=69.9
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cccC-CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHH
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISS 471 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~-----ET~p-~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~ 471 (581)
.++.+. ++..++.+.+.|||.|++ |... +..|-+.+++.+.+. ..+||++.. .+.+..+
T Consensus 29 ~iD~~~----l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv---------g~~~t~~ 95 (301)
T 1xky_A 29 NIDFAK----TTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGT---------GSNNTHA 95 (301)
T ss_dssp SBCHHH----HHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSCHHH
T ss_pred CcCHHH----HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCC---------CCCCHHH
Confidence 355544 456677777899999875 3222 267777777776643 358999877 2346677
Q ss_pred HHHHHHhhCCCCceEEEECC---C--CCccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 472 AVTSCLLANPDQIQAIGVNC---V--RPSHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 472 ~~~~l~~~~~~~~~~iGiNC---~--~p~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
+++..+.....+++++.+-. . +.+.+....+.+.... ++|+++|-+-
T Consensus 96 ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilYn~P 147 (301)
T 1xky_A 96 SIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAEST-PLPVMLYNVP 147 (301)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTC-SSCEEEEECH
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEeCc
Confidence 77766555566888877755 1 2234555567777766 6999999864
No 37
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=90.00 E-value=0.96 Score=45.96 Aligned_cols=104 Identities=20% Similarity=0.193 Sum_probs=72.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCcEEEE-----EccC-CHHHHHHHHHHHHhc--CCCcEEEEEEEcCCCcCCCCCCHHH
Q psy15811 144 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISS 215 (581)
Q Consensus 144 ~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~~-~~~E~~aa~~a~~~~--~~~pv~isft~~~~g~l~~G~~~~~ 215 (581)
.++++ .+++.++.+++.|||.|++ |... +.+|=+.+++.+.+. ..+||++.. |.+..+
T Consensus 29 ~iD~~----~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGv----------g~~t~~ 94 (316)
T 3e96_A 29 SIDWH----HYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGI----------GYATST 94 (316)
T ss_dssp CBCHH----HHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE----------CSSHHH
T ss_pred CCCHH----HHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEe----------CcCHHH
Confidence 46664 4567788888999999865 3222 677877777777643 358998754 124667
Q ss_pred HHHHHHhhCCCCceEEEeCC-----CChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 216 AVTSCLLANPDQIQAIGVNC-----VRPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 216 ~~~~~~~~~~~~~~~vGvNC-----~~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
+++.+..+...|++++.+-. ...+.+....+.+... +++|+++|-+
T Consensus 95 ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a-~~lPiilYn~ 145 (316)
T 3e96_A 95 AIELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEA-LDFPSLVYFK 145 (316)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHH-HTSCEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh-CCCCEEEEeC
Confidence 77665555567889988864 2456777888888775 6899999954
No 38
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=89.85 E-value=2.5 Score=42.14 Aligned_cols=104 Identities=11% Similarity=0.113 Sum_probs=70.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHH
Q psy15811 144 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAV 217 (581)
Q Consensus 144 ~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~ 217 (581)
.++++ .+++.++.+++.|||.|++ |.. -+.+|=+.+++.+.+..+- |++.. .+.+..+++
T Consensus 15 ~iD~~----~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gv---------g~~~t~~ai 80 (286)
T 2r91_A 15 RLDPE----LFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR-VIVQV---------ASLNADEAI 80 (286)
T ss_dssp EECHH----HHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS-EEEEC---------CCSSHHHHH
T ss_pred ccCHH----HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-EEEee---------CCCCHHHHH
Confidence 46654 4566788888999999876 432 3677888888887754322 54422 234566777
Q ss_pred HHHHhhCCCCceEEEeCCC---C---hhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 218 TSCLLANPDQIQAIGVNCV---R---PSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 218 ~~~~~~~~~~~~~vGvNC~---~---p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
+.+..+...|++++.+-.- . .+.+....+.+... +++|+++|=+
T Consensus 81 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a-~~lPiilYn~ 130 (286)
T 2r91_A 81 ALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSA-VSIPVFLYNY 130 (286)
T ss_dssp HHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHH-CSSCEEEEEC
T ss_pred HHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHh-cCCCEEEEeC
Confidence 6655555689999988652 2 35667777777775 7899999954
No 39
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=89.78 E-value=2.2 Score=42.21 Aligned_cols=174 Identities=9% Similarity=0.104 Sum_probs=94.1
Q ss_pred CccccccCCCh--HHHHHHHHHHHHhccccccccccccccc-----------cHhhcCCCHHHHHHHHHHHHHHHHHHhh
Q psy15811 31 LWSSVYLTTEP--EACVETHRDFIRAGADIIQSSCYQANVD-----------NLTKLGYSEQEALDLLHKSVQLMNSAKD 97 (581)
Q Consensus 31 ~ws~~~~l~~P--e~v~~iH~~yl~AGAdiI~TnTf~a~~~-----------~l~~~g~~~~~~~~i~~~av~lA~~a~~ 97 (581)
.+..++..-+| +.-.++-+...++|||+|+-.-.-..|. +--+.|.+. +...++.++++.
T Consensus 19 ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~-------~~~~~~v~~ir~ 91 (267)
T 3vnd_A 19 AFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTS-------SDCFDIITKVRA 91 (267)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCH-------HHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCH-------HHHHHHHHHHHh
Confidence 34456666777 7888899999999999998774322221 001122221 122556666654
Q ss_pred hhcCCCcccccccccccCCCeEEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEEEccCCH
Q psy15811 98 KENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAE 177 (581)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~ET~~~~ 177 (581)
.... . ++.+.+-.-|. .......-++.+.++|||.+++=..|-
T Consensus 92 ~~~~---------~-----Pivlm~Y~npv----------------------~~~g~e~f~~~~~~aGvdgvii~Dlp~- 134 (267)
T 3vnd_A 92 QHPD---------M-----PIGLLLYANLV----------------------FANGIDEFYTKAQAAGVDSVLIADVPV- 134 (267)
T ss_dssp HCTT---------C-----CEEEEECHHHH----------------------HHHCHHHHHHHHHHHTCCEEEETTSCG-
T ss_pred cCCC---------C-----CEEEEecCcHH----------------------HHhhHHHHHHHHHHcCCCEEEeCCCCH-
Confidence 3111 1 44433211110 111124456777889999999977764
Q ss_pred HHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC-C-----hhhHHHHHHHHHhh
Q psy15811 178 KEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV-R-----PSHVSTLVRCIKQS 251 (581)
Q Consensus 178 ~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~-~-----p~~~~~~l~~l~~~ 251 (581)
+|....++.+++. ++..+.- +.+ .++. +-+..+.+....-+-.+.++++ | +..+.+.++.+++.
T Consensus 135 ee~~~~~~~~~~~-gl~~i~l--iaP------~t~~-eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~ 204 (267)
T 3vnd_A 135 EESAPFSKAAKAH-GIAPIFI--APP------NADA-DTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEF 204 (267)
T ss_dssp GGCHHHHHHHHHT-TCEEECE--ECT------TCCH-HHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHc-CCeEEEE--ECC------CCCH-HHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHh
Confidence 5778888888875 6654322 221 1223 3334443322222334456773 3 33467788888875
Q ss_pred CCCCceEE
Q psy15811 252 HPTVQTIV 259 (581)
Q Consensus 252 ~~~~p~~~ 259 (581)
.+.|+.+
T Consensus 205 -~~~pv~v 211 (267)
T 3vnd_A 205 -NAPPPLL 211 (267)
T ss_dssp -TCCCEEE
T ss_pred -cCCCEEE
Confidence 5556554
No 40
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=89.62 E-value=1.9 Score=43.77 Aligned_cols=105 Identities=13% Similarity=0.138 Sum_probs=72.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhc--CCCcEEEEEEEcCCCcCCCCCCHHH
Q psy15811 144 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISS 215 (581)
Q Consensus 144 ~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~--~~~pv~isft~~~~g~l~~G~~~~~ 215 (581)
.++++. +++.++.+++.|||.|++ |.. -+.+|=+.+++.+.+. ..+||++.. .+.+..+
T Consensus 28 ~iD~~~----l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~ 94 (318)
T 3qfe_A 28 TLDLAS----QERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGV---------GAHSTRQ 94 (318)
T ss_dssp EECHHH----HHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEEC---------CCSSHHH
T ss_pred CCCHHH----HHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCCCHHH
Confidence 466644 566788888999998765 322 2677878888777653 358998733 2345667
Q ss_pred HHHHHHhhCCCCceEEEeCCC-------ChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 216 AVTSCLLANPDQIQAIGVNCV-------RPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 216 ~~~~~~~~~~~~~~~vGvNC~-------~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
+++.+..+...|++++.+-.- ..+.+....+.+... .++|+++|=+
T Consensus 95 ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a-~~lPiilYn~ 147 (318)
T 3qfe_A 95 VLEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQ-SPLPVVIYNF 147 (318)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHH-CSSCEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhh-CCCCEEEEeC
Confidence 776655545678898888652 135667777777775 7899999944
No 41
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=89.59 E-value=2.4 Score=42.53 Aligned_cols=101 Identities=15% Similarity=0.062 Sum_probs=67.1
Q ss_pred HHHHHHHHHHhCCCCEEEe-----cccC-CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhC
Q psy15811 409 WHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN 480 (581)
Q Consensus 409 ~~~~~~~~l~~~gvD~i~~-----ET~p-~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~ 480 (581)
.++..++.+.+.|||.|++ |... +.+|-+.+++.+.+. ..+||++... +.+..++++..+...
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~ai~la~~A~ 92 (294)
T 2ehh_A 22 ALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTG---------GNATHEAVHLTAHAK 92 (294)
T ss_dssp HHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC---------CSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CCCHHHHHHHHHHHH
Confidence 4456777778899999876 3222 266777777776643 3589997772 346677777665555
Q ss_pred CCCceEEEECC---C--CCccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 481 PDQIQAIGVNC---V--RPSHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 481 ~~~~~~iGiNC---~--~p~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
..+++++.+-. . +.+.+....+.+.... ++|+++|-+-
T Consensus 93 ~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilYn~P 135 (294)
T 2ehh_A 93 EVGADGALVVVPYYNKPTQRGLYEHFKTVAQEV-DIPIIIYNIP 135 (294)
T ss_dssp HTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-CSCEEEEECH
T ss_pred hcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEeCC
Confidence 56788777755 1 2233555567777766 6999999864
No 42
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=89.32 E-value=4.4 Score=42.76 Aligned_cols=138 Identities=16% Similarity=0.174 Sum_probs=91.7
Q ss_pred HHHHHHHHHhCCCCEEEecccC---------------CHHHHHHHHHHHHh---cCCCeEEEEEEEcCCC----------
Q psy15811 410 HRPNVEALVRAGVDYLALETIP---------------AEKEALALVKLLRE---FPGQKAWLSFSCKDDT---------- 461 (581)
Q Consensus 410 ~~~~~~~l~~~gvD~i~~ET~p---------------~~~Ea~a~~~~~~~---~~~~pv~iSft~~~~~---------- 461 (581)
-.+.++.+.++||-.|-||+.- ...|+..=+.+++. ..+.+++|---++...
T Consensus 169 v~~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~IiARTDa~~a~l~~s~~d~ 248 (439)
T 3i4e_A 169 AFELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGTPTVLVARTDAEAADLITSDIDD 248 (439)
T ss_dssp HHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCCT
T ss_pred HHHHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCccccccccccccc
Confidence 3466788889999999999864 24555544444442 1366777666554321
Q ss_pred ---------cCCCC-----CcHHHHHHHHHhhCCCCceEEEECC--CCCccchHHHHHHHhhCCCCeEEEeeCCCCCccc
Q psy15811 462 ---------HTSHG-----ELISSAVTSCLLANPDQIQAIGVNC--VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDS 525 (581)
Q Consensus 462 ---------~l~~G-----~~~~~~~~~l~~~~~~~~~~iGiNC--~~p~~~~~~l~~l~~~~~~~pl~~ypNag~~~~~ 525 (581)
+++.| ..++++++....... ++++|=+-. .+++.+..+.+.++... +.++++|+++. .+
T Consensus 249 ~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~-GAD~if~E~~~~~~eei~~f~~~v~~~~-P~~~l~~~~sP-sf-- 323 (439)
T 3i4e_A 249 NDKPYLTGERTVEGFFRTKPGLEQAISRGLAYAP-YADLIWCETGKPDLEYAKKFAEAIHKQF-PGKLLSYNCSP-SF-- 323 (439)
T ss_dssp TTGGGEEEEECTTSCEEECCSHHHHHHHHHHHTT-TCSEEEECCSSCCHHHHHHHHHHHHHHS-TTCEEEEECCS-SS--
T ss_pred ccchhhcccCcccccccccCCHHHHHHHHHHHHh-hCCEEEecCCCCCHHHHHHHHHHhcccC-CceEEeeCCCC-CC--
Confidence 11222 459999999876666 889777743 36667777777777544 46778887664 11
Q ss_pred ccccccCCcCHHHHHHHHHHHHHcCCcEEe
Q psy15811 526 VHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555 (581)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~w~~~G~~iiG 555 (581)
+ |....+++.+..|..++.+.|++++=
T Consensus 324 n---w~~~~~~~~~~~f~~eL~~lGv~~v~ 350 (439)
T 3i4e_A 324 N---WKKNLDDATIAKFQKELGAMGYKFQF 350 (439)
T ss_dssp C---HHHHSCHHHHHTHHHHHHHHTCCEEE
T ss_pred c---CcccCCHHHHHHHHHHHHHcCCeEEE
Confidence 2 55455678888899999999988765
No 43
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=89.24 E-value=8.1 Score=37.72 Aligned_cols=120 Identities=12% Similarity=0.070 Sum_probs=73.1
Q ss_pred HHHHHHHhCCCCEE---EecccCCH----HHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcH---HHHHHHHHhhCC
Q psy15811 412 PNVEALVRAGVDYL---ALETIPAE----KEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELI---SSAVTSCLLANP 481 (581)
Q Consensus 412 ~~~~~l~~~gvD~i---~~ET~p~~----~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~---~~~~~~l~~~~~ 481 (581)
++++...+.|+|.| +..-.++. .+++.+++..++ .++|+++-.. .+..++..|.+. .++++.+ ..
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~-~g~~viv~~~-~~G~~l~~~~~~~~~~~~a~~a---~~ 177 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEY-WGMPLIAMMY-PRGKHIQNERDPELVAHAARLG---AE 177 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHH-HTCCEEEEEE-ECSTTCSCTTCHHHHHHHHHHH---HH
T ss_pred HHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHH-cCCCEEEEeC-CCCcccCCCCCHhHHHHHHHHH---HH
Confidence 55677778999999 55555543 345666777766 4889888643 233345455444 3443433 33
Q ss_pred CCceEEEECCCCCccchHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHHHcCCc
Q psy15811 482 DQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552 (581)
Q Consensus 482 ~~~~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~~G~~ 552 (581)
.+++.|+++- + .=...++++.... ++|+++..-.+ ..+++++.+.++++++.|+.
T Consensus 178 ~Gad~i~~~~--~-~~~~~l~~i~~~~-~ipvva~GGi~------------~~~~~~~~~~~~~~~~~Ga~ 232 (273)
T 2qjg_A 178 LGADIVKTSY--T-GDIDSFRDVVKGC-PAPVVVAGGPK------------TNTDEEFLQMIKDAMEAGAA 232 (273)
T ss_dssp TTCSEEEECC--C-SSHHHHHHHHHHC-SSCEEEECCSC------------CSSHHHHHHHHHHHHHHTCS
T ss_pred cCCCEEEECC--C-CCHHHHHHHHHhC-CCCEEEEeCCC------------CCCHHHHHHHHHHHHHcCCc
Confidence 5678888873 2 2235566776554 58877643222 11256777788888888875
No 44
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=89.19 E-value=2.1 Score=43.26 Aligned_cols=105 Identities=14% Similarity=0.062 Sum_probs=68.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----cccC-CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHHH
Q psy15811 401 MTEADLIAWHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISSA 472 (581)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~~gvD~i~~-----ET~p-~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~~ 472 (581)
++.+. ++..++.+.+.|||.|++ |... +.+|-+.+++.+.+. ..+||++.. .+.+..++
T Consensus 30 iD~~~----l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv---------g~~st~~a 96 (306)
T 1o5k_A 30 LDLES----YERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGA---------GTNSTEKT 96 (306)
T ss_dssp ECHHH----HHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSCHHHH
T ss_pred cCHHH----HHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcC---------CCccHHHH
Confidence 55544 456677777899999876 3222 266777777777643 358999877 23456777
Q ss_pred HHHHHhhCCCCceEEEECC---C--CCccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 473 VTSCLLANPDQIQAIGVNC---V--RPSHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 473 ~~~l~~~~~~~~~~iGiNC---~--~p~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
++..+.....+++++.+-. . +.+.+....+.+.... ++|+++|-+-
T Consensus 97 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilYn~P 147 (306)
T 1o5k_A 97 LKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERT-DLGIVVYNVP 147 (306)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTC-SSCEEEEECH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEEeCc
Confidence 7766544456778777755 1 2234555566777766 6999999864
No 45
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=89.12 E-value=1.8 Score=43.31 Aligned_cols=101 Identities=14% Similarity=0.056 Sum_probs=67.8
Q ss_pred HHHHHHHHHHhCCCCEEEe-----cccC-CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhC
Q psy15811 409 WHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN 480 (581)
Q Consensus 409 ~~~~~~~~l~~~gvD~i~~-----ET~p-~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~ 480 (581)
.++..++.+.+.|||.|++ |... +.+|-+.+++.+.+. ..+||++... +.+..++++..+...
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg---------~~~t~~ai~la~~A~ 92 (292)
T 2vc6_A 22 ALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAG---------SNSTAEAIAFVRHAQ 92 (292)
T ss_dssp HHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC---------CSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CccHHHHHHHHHHHH
Confidence 3456677777899999875 3222 266777777777643 3589998772 345677777665555
Q ss_pred CCCceEEEECCC-----CCccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 481 PDQIQAIGVNCV-----RPSHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 481 ~~~~~~iGiNC~-----~p~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
..+++++.+..- +.+.+....+.+.... ++|+++|-+-
T Consensus 93 ~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~-~lPiilYn~P 135 (292)
T 2vc6_A 93 NAGADGVLIVSPYYNKPTQEGIYQHFKAIDAAS-TIPIIVYNIP 135 (292)
T ss_dssp HTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-SSCEEEEECH
T ss_pred HcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEEeCc
Confidence 678888877761 2234555566777766 6999999863
No 46
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=89.05 E-value=1.9 Score=43.65 Aligned_cols=119 Identities=9% Similarity=0.037 Sum_probs=79.0
Q ss_pred eEEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhc-
Q psy15811 118 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREF- 190 (581)
Q Consensus 118 ~~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~- 190 (581)
-++..-+-|+.. .+.++++. ++..++.+++.|||.|++ |.. -+.+|=+.+++.+.+.
T Consensus 11 Gv~~a~vTPf~~------------dg~iD~~~----l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~ 74 (313)
T 3dz1_A 11 GTFAIAPTPFHD------------DGKIDDVS----IDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA 74 (313)
T ss_dssp EEEEECCCCBCT------------TSCBCHHH----HHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC
T ss_pred eEEEEeeCCCCC------------CCCcCHHH----HHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc
Confidence 345556777654 13577644 567788888999998876 322 2677877788777643
Q ss_pred CCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC----ChhhHHHHHHHHHhhCCC--CceEEecC
Q psy15811 191 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV----RPSHVSTLVRCIKQSHPT--VQTIVYPN 262 (581)
Q Consensus 191 ~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~----~p~~~~~~l~~l~~~~~~--~p~~~~pn 262 (581)
..+||++.. .+.+..++++.+..+...|++++.+-.- ..+.+....+.+... ++ +|+++|-+
T Consensus 75 grvpViaGv---------g~~~t~~ai~la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a-~~~~lPiilYn~ 142 (313)
T 3dz1_A 75 KSMQVIVGV---------SAPGFAAMRRLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEA-IGDDVPWVLQDY 142 (313)
T ss_dssp TTSEEEEEC---------CCSSHHHHHHHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHH-HCTTSCEEEEEC
T ss_pred CCCcEEEec---------CCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHh-CCCCCcEEEEeC
Confidence 468888733 2345667776655555678898888541 346677777777765 55 99999943
No 47
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=88.84 E-value=2.8 Score=44.11 Aligned_cols=138 Identities=14% Similarity=0.126 Sum_probs=91.0
Q ss_pred HHHHHHHHhCCCCEEEecccC---------------CHHHHHHHHHHHHh---cCCCeEEEEEEEcCCC-----------
Q psy15811 411 RPNVEALVRAGVDYLALETIP---------------AEKEALALVKLLRE---FPGQKAWLSFSCKDDT----------- 461 (581)
Q Consensus 411 ~~~~~~l~~~gvD~i~~ET~p---------------~~~Ea~a~~~~~~~---~~~~pv~iSft~~~~~----------- 461 (581)
...++.|.++||-.|-+|+.- +..|+..=+++++. ..+.+++|---++...
T Consensus 170 ~~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~~d~~IiARTDa~aa~l~~s~~d~r 249 (435)
T 3lg3_A 170 FELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLGVPTLLIARTDADAADLLTSDCDPY 249 (435)
T ss_dssp HHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCCGG
T ss_pred HHHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCCccccccccccccc
Confidence 466788889999999999853 24555444444431 1366766666554321
Q ss_pred --cCCCC-----------CcHHHHHHHHHhhCCCCceEEEECC--CCCccchHHHHHHHhhCCCCeEEEeeCCCCCcccc
Q psy15811 462 --HTSHG-----------ELISSAVTSCLLANPDQIQAIGVNC--VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSV 526 (581)
Q Consensus 462 --~l~~G-----------~~~~~~~~~l~~~~~~~~~~iGiNC--~~p~~~~~~l~~l~~~~~~~pl~~ypNag~~~~~~ 526 (581)
....| ..++++++....... ++++|=+-. .+++.+..+.+.++... +..+.+|+++. .+ +
T Consensus 250 D~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~if~E~~~~~~~ei~~f~~~v~~~~-P~~~La~~~sP-sf--n 324 (435)
T 3lg3_A 250 DREFITGDRTAEGFFRTRAGIEQAISRGLAYAP-YADLVWCETSTPDLALAKRFADAVHAQF-PGKLLAYNCSP-SF--N 324 (435)
T ss_dssp GGGGEEEEECTTCCEEECCSHHHHHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHHHS-TTCEEEEECCS-SS--C
T ss_pred cchhhcccccccccccccCCHHHHHHHHHHHHc-cCCEEEecCCCCCHHHHHHHHHHhcccc-CCeEEEeCCCC-Cc--c
Confidence 11222 569999998876666 889777744 25566777777776544 46677887653 11 2
Q ss_pred cccccCCcCHHHHHHHHHHHHHcCCcEEee
Q psy15811 527 HMKWLDTEDEYSILHYVPQWLEEGVNIIGG 556 (581)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~w~~~G~~iiGG 556 (581)
|....+++.+..+..++.+.|++++==
T Consensus 325 ---w~~~~~d~~~~~f~~eLa~lG~~~v~~ 351 (435)
T 3lg3_A 325 ---WKKNLTDQQIASFQDELSAMGYKYQFI 351 (435)
T ss_dssp ---HHHHSCHHHHHHHHHHHHHTTEEEEEE
T ss_pred ---ccccCCHHHHHHHHHHHHHcCCcEEEe
Confidence 555566889999999999999877653
No 48
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=88.78 E-value=2.2 Score=42.67 Aligned_cols=101 Identities=10% Similarity=0.092 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHCCCcEEEE-----EccC-CHHHHHHHHHHHHhc--CCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhh
Q psy15811 152 AWHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 223 (581)
Q Consensus 152 ~~~~~q~~~l~~~gvD~l~~-----ET~~-~~~E~~aa~~a~~~~--~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~ 223 (581)
+.+++.++.+++.|||.|++ |... +.+|=+.+++.+.+. ..+||++.. .+.+..++++.+..+
T Consensus 23 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~ai~la~~a 93 (292)
T 3daq_A 23 EALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGT---------GTNDTEKSIQASIQA 93 (292)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CcccHHHHHHHHHHH
Confidence 45667788888999999875 3222 577877777777643 358998743 224566777655544
Q ss_pred CCCCceEEEeCCC-----ChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 224 NPDQIQAIGVNCV-----RPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 224 ~~~~~~~vGvNC~-----~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
...|++++.+-.- ..+.+....+.+... .++|+++|-+
T Consensus 94 ~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a-~~lPiilYn~ 136 (292)
T 3daq_A 94 KALGADAIMLITPYYNKTNQRGLVKHFEAIADA-VKLPVVLYNV 136 (292)
T ss_dssp HHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHH-HCSCEEEEEC
T ss_pred HHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-CCCCEEEEec
Confidence 4678888887652 346677777777775 6899999943
No 49
>3r89_A Orotidine 5'-phosphate decarboxylase; PSI-biology, midwest center for structural genomics, MCSG, O 5-phosphate decarboxylase, lyase; 1.84A {Anaerococcus prevotii}
Probab=88.61 E-value=1.7 Score=43.56 Aligned_cols=160 Identities=14% Similarity=0.063 Sum_probs=98.0
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEE-----EecccC--CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHH
Q psy15811 402 TEADLIAWHRPNVEALVRAGVDYL-----ALETIP--AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVT 474 (581)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~~gvD~i-----~~ET~p--~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~ 474 (581)
+.+.+.+|.+..++.+.+ .|.++ +||... -+.+.+.+++.+++ .+.+|+.-+-+.| .|.+...+++
T Consensus 41 ~~~~l~~f~~~ivd~l~~-~v~~~Kvg~~lf~~~G~~~v~~L~~~i~~~~~-~g~~VflDlK~~D-----IpnTv~~~a~ 113 (290)
T 3r89_A 41 VSEALFSYNKEIIDQTYD-VCAIYKLQIAYYESYGIEGMIAYRDTLSYLRE-KDLLSIGDVKRSD-----IAASAKMYAK 113 (290)
T ss_dssp HHHHHHHHHHHHHHHHTT-SCSEEEEEHHHHHTTHHHHHHHHHHHHHHHHH-TTCCEEEEEEECC-----CHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCC-cceEEEecHHHHHhcCHHHHHHHHHHHHHHHH-CCCeEEEEecccC-----cHHHHHHHHH
Confidence 367888888999998864 44443 333322 13455556677776 4899998887654 4666777776
Q ss_pred HHHhhC-CCCceEEEECC-CCCccchHHHHHHHhhCCCCe-EEEeeCCCC--CcccccccccCCcCHHHHHHHHHHHHHc
Q psy15811 475 SCLLAN-PDQIQAIGVNC-VRPSHVSTLVRCIKQSHPTVQ-TIVYPNKGG--VWDSVHMKWLDTEDEYSILHYVPQWLEE 549 (581)
Q Consensus 475 ~l~~~~-~~~~~~iGiNC-~~p~~~~~~l~~l~~~~~~~p-l~~ypNag~--~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 549 (581)
.+ .. ..+++++-++. .++..+.++++.....+..+. |.-.-|.|. ..+.. .....--+..++.+.+|...
T Consensus 114 ~~--~~~~lg~D~vTvh~~~G~~~l~~~~~~a~~~~kgv~vL~~tSn~g~~d~q~~~---~~~g~l~~~V~~~a~~~~~~ 188 (290)
T 3r89_A 114 AH--FEGDFETDFITLNPYMGMDSIEPYEEYIEKGDKGVFVLLRTSNPGAKDFEVLP---VDGEEFFYKVGDKMRELNEK 188 (290)
T ss_dssp HH--HSGGGCCSEEEECCTTCGGGTGGGHHHHHTTSCEEEEEEECCSGGGGTTTTCE---ETTEETHHHHHHHHHHHHGG
T ss_pred HH--hccccCCCEEEEcccCCHHHHHHHHHHHHhcCCeEEEEEeCCCCCHHHHhhcc---cCCCCHHHHHHHHHHHHhhh
Confidence 65 22 25789999999 678888888887766542222 222333331 11110 00011124567778888642
Q ss_pred --C---CcEEeecCCCc-hHHHHHHHHHHh
Q psy15811 550 --G---VNIIGGCCEVT-SYEIQQMRIMID 573 (581)
Q Consensus 550 --G---~~iiGGCCGt~-P~hI~al~~~l~ 573 (581)
| -..+|=-||.| |+.++.||+.+.
T Consensus 189 ~~g~~~~g~~GvVvgAT~p~e~~~iR~~~~ 218 (290)
T 3r89_A 189 YIGKSGFGPIGLVVGATHSEEVEKIRKRYD 218 (290)
T ss_dssp GCCTTSCEEEEEEECCCCHHHHHHHHHHTT
T ss_pred ccCCCCCCceEEEECCCChHHHHHHHHhCC
Confidence 3 23677777755 999999998764
No 50
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=88.61 E-value=4.2 Score=42.84 Aligned_cols=137 Identities=13% Similarity=0.184 Sum_probs=89.2
Q ss_pred HHHHHHHHhCCCCEEEecccCC---------------HHHHHHHHHHHHh---cCCCeEEEEEEEcCCC-----------
Q psy15811 411 RPNVEALVRAGVDYLALETIPA---------------EKEALALVKLLRE---FPGQKAWLSFSCKDDT----------- 461 (581)
Q Consensus 411 ~~~~~~l~~~gvD~i~~ET~p~---------------~~Ea~a~~~~~~~---~~~~pv~iSft~~~~~----------- 461 (581)
...++.|.++||-.|-||+.-. ..|+..=+++++. ..+.+++|---++...
T Consensus 163 ~rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~d~vIiARTDA~~a~l~~s~~d~r 242 (433)
T 3eol_A 163 FEIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGTPTLIVARTDAEAAKLLTSDIDER 242 (433)
T ss_dssp HHHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCSTT
T ss_pred HHHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCEEEEEEcCCccccccccCcccc
Confidence 4668888899999999998642 4454443444431 1256666665554311
Q ss_pred ----------cCCCC-----CcHHHHHHHHHhhCCCCceEEEECC--CCCccchHHHHHHHhhCCCCeEEEeeCCCCCcc
Q psy15811 462 ----------HTSHG-----ELISSAVTSCLLANPDQIQAIGVNC--VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWD 524 (581)
Q Consensus 462 ----------~l~~G-----~~~~~~~~~l~~~~~~~~~~iGiNC--~~p~~~~~~l~~l~~~~~~~pl~~ypNag~~~~ 524 (581)
++..| ..++++++....... +++.|=+-. .+++.+..+.+.++... +.++.+|+++. .+
T Consensus 243 d~~fl~g~g~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~If~e~~~~~~eei~~f~~~v~~~~-P~~~L~~~~sP-sf- 318 (433)
T 3eol_A 243 DQPFVDYEAGRTAEGFYQVKNGIEPCIARAIAYAP-YCDLIWMETSKPDLAQARRFAEAVHKAH-PGKLLAYNCSP-SF- 318 (433)
T ss_dssp TGGGBCSSSCBCTTCCEEBCCSHHHHHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHHHS-TTCCEEEECCS-SS-
T ss_pred cccceeccCcccccccccccCCHHHHHHHHHHHHh-cCCEEEEeCCCCCHHHHHHHHHHhcccC-CCcccccCCCC-CC-
Confidence 11222 569999998876665 889777754 25666777777776544 46778887653 11
Q ss_pred cccccccCCcCHHHHHHHHHHHHHcCCcEEe
Q psy15811 525 SVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555 (581)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~w~~~G~~iiG 555 (581)
+ |....+++++..+..++.+.|++++=
T Consensus 319 -n---w~~~~~~~~~~~f~~eLa~lGv~~v~ 345 (433)
T 3eol_A 319 -N---WKKNLDDATIAKFQRELGAMGYKFQF 345 (433)
T ss_dssp -C---HHHHSCHHHHHHHHHHHHHHTEEEEE
T ss_pred -c---ccccCChhHHhHHHHHHHHcCCeEEE
Confidence 2 54445677888888999999987765
No 51
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=88.41 E-value=2.7 Score=41.98 Aligned_cols=105 Identities=10% Similarity=0.101 Sum_probs=68.1
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----cccC-CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHHH
Q psy15811 401 MTEADLIAWHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISSA 472 (581)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~~gvD~i~~-----ET~p-~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~~ 472 (581)
++.+. ++..++.+.+.|||.|++ |... +.+|-+.+++.+.+. ..+||++... +.+..++
T Consensus 18 iD~~~----l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg---------~~~t~~a 84 (289)
T 2yxg_A 18 VDFDG----LEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAG---------SNCTEEA 84 (289)
T ss_dssp ECHHH----HHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC---------CSSHHHH
T ss_pred cCHHH----HHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------CCCHHHH
Confidence 55544 456677777899999875 3221 266777777776642 3589998772 3456777
Q ss_pred HHHHHhhCCCCceEEEECC---C--CCccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 473 VTSCLLANPDQIQAIGVNC---V--RPSHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 473 ~~~l~~~~~~~~~~iGiNC---~--~p~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
++..+.....+++++.+-. . +.+.+....+.+.... ++|+++|-+-
T Consensus 85 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~-~lPiilYn~P 135 (289)
T 2yxg_A 85 IELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESI-NLPIVLYNVP 135 (289)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-SSCEEEEECH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEeCc
Confidence 7666544456778777755 1 2233555567777766 6999999864
No 52
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=88.33 E-value=2.5 Score=43.18 Aligned_cols=106 Identities=10% Similarity=0.052 Sum_probs=68.9
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cccC-CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHH
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISS 471 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~-----ET~p-~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~ 471 (581)
.++.+.+ +..++.+.+.|||.|++ |... +..|-+.+++.+.+. ..+||++... +.+..+
T Consensus 51 ~iD~~~l----~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg---------~~st~e 117 (332)
T 2r8w_A 51 RVDIEAF----SALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIG---------ALRTDE 117 (332)
T ss_dssp CBCHHHH----HHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC---------CSSHHH
T ss_pred CcCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CCCHHH
Confidence 3665544 45666667789999876 3222 266777777777643 3589998873 345677
Q ss_pred HHHHHHhhCCCCceEEEECC-C----CCccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 472 AVTSCLLANPDQIQAIGVNC-V----RPSHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 472 ~~~~l~~~~~~~~~~iGiNC-~----~p~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
+++..+.....+++++.+-. . +.+.+....+.+.... ++|+++|-+-
T Consensus 118 ai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~-~lPiilYn~P 169 (332)
T 2r8w_A 118 AVALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGAT-ALPLAIYNNP 169 (332)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHC-SSCEEEECCH
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEeCc
Confidence 77766544456788777765 1 2233555567777766 6999999763
No 53
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=88.31 E-value=11 Score=37.29 Aligned_cols=172 Identities=12% Similarity=0.121 Sum_probs=91.8
Q ss_pred ccccccCCCh--HHHHHHHHHHHHhccccccccccccccc-----------cHhhcCCCHHHHHHHHHHHHHHHHHHhhh
Q psy15811 32 WSSVYLTTEP--EACVETHRDFIRAGADIIQSSCYQANVD-----------NLTKLGYSEQEALDLLHKSVQLMNSAKDK 98 (581)
Q Consensus 32 ws~~~~l~~P--e~v~~iH~~yl~AGAdiI~TnTf~a~~~-----------~l~~~g~~~~~~~~i~~~av~lA~~a~~~ 98 (581)
+..++..-+| |.-.++-+...++|||+|+-..--..|. +--+.|.+. +...++.++++.+
T Consensus 22 li~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~-------~~~~~~v~~~r~~ 94 (271)
T 3nav_A 22 FVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTP-------DICFELIAQIRAR 94 (271)
T ss_dssp EEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCH-------HHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCH-------HHHHHHHHHHHhc
Confidence 3345555565 5677888899999999998875432221 111123321 1334556666544
Q ss_pred hcCCCcccccccccccCCCeEEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEEEccCCHH
Q psy15811 99 ENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEK 178 (581)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~ET~~~~~ 178 (581)
+.. . ++.+.+-.-|.- ......-++.+.++|||.+++=.+|- +
T Consensus 95 ~~~---------~-----Pivlm~Y~n~v~----------------------~~g~~~f~~~~~~aGvdGvIipDlp~-e 137 (271)
T 3nav_A 95 NPE---------T-----PIGLLMYANLVY----------------------ARGIDDFYQRCQKAGVDSVLIADVPT-N 137 (271)
T ss_dssp CTT---------S-----CEEEEECHHHHH----------------------HTCHHHHHHHHHHHTCCEEEETTSCG-G
T ss_pred CCC---------C-----CEEEEecCcHHH----------------------HHhHHHHHHHHHHCCCCEEEECCCCH-H
Confidence 111 1 444432222210 01124446667789999999977765 5
Q ss_pred HHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEE-EeCC-C-----ChhhHHHHHHHHHhh
Q psy15811 179 EALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI-GVNC-V-----RPSHVSTLVRCIKQS 251 (581)
Q Consensus 179 E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~v-GvNC-~-----~p~~~~~~l~~l~~~ 251 (581)
|.....+++++. ++..+. + +.+. ++. +-+..+.+. ..+-.++ ...- + -+..+.+.++.+++.
T Consensus 138 e~~~~~~~~~~~-gl~~I~-l-vap~------t~~-eri~~i~~~-~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~ 206 (271)
T 3nav_A 138 ESQPFVAAAEKF-GIQPIF-I-APPT------ASD-ETLRAVAQL-GKGYTYLLSRAGVTGAETKANMPVHALLERLQQF 206 (271)
T ss_dssp GCHHHHHHHHHT-TCEEEE-E-ECTT------CCH-HHHHHHHHH-CCSCEEECCCC--------CCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc-CCeEEE-E-ECCC------CCH-HHHHHHHHH-CCCeEEEEeccCCCCcccCCchhHHHHHHHHHHh
Confidence 778888888876 665332 2 2211 122 233333332 2232222 2211 1 245677889999885
Q ss_pred CCCCceEE
Q psy15811 252 HPTVQTIV 259 (581)
Q Consensus 252 ~~~~p~~~ 259 (581)
.++|+.+
T Consensus 207 -~~~Pv~v 213 (271)
T 3nav_A 207 -DAPPALL 213 (271)
T ss_dssp -TCCCEEE
T ss_pred -cCCCEEE
Confidence 6677665
No 54
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=88.20 E-value=5 Score=40.13 Aligned_cols=107 Identities=11% Similarity=0.052 Sum_probs=69.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cccC-CHHHHHHHHHHHHhcC--CCeEEEEEEEcCCCcCCCCCcHHH
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREFP--GQKAWLSFSCKDDTHTSHGELISS 471 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~-----ET~p-~~~Ea~a~~~~~~~~~--~~pv~iSft~~~~~~l~~G~~~~~ 471 (581)
.++.+. ++..++.+.+.|||.|++ |... +.+|-+.+++.+.+.. .+||++... +.+..+
T Consensus 20 ~iD~~~----l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg---------~~~t~~ 86 (294)
T 3b4u_A 20 TVDIDA----MIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVL---------VDSIED 86 (294)
T ss_dssp SBCHHH----HHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEEC---------CSSHHH
T ss_pred CcCHHH----HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------CccHHH
Confidence 355544 456677777899999876 3222 2677788888777542 479998872 346677
Q ss_pred HHHHHHhhCCCCceEEEECC---CC-C--ccchHHHHHHHhhCC--CCeEEEeeCC
Q psy15811 472 AVTSCLLANPDQIQAIGVNC---VR-P--SHVSTLVRCIKQSHP--TVQTIVYPNK 519 (581)
Q Consensus 472 ~~~~l~~~~~~~~~~iGiNC---~~-p--~~~~~~l~~l~~~~~--~~pl~~ypNa 519 (581)
+++..+.....+++++.+-. .. | +.+....+.+....+ ++|+++|-+-
T Consensus 87 ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P 142 (294)
T 3b4u_A 87 AADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIP 142 (294)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECH
T ss_pred HHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECc
Confidence 77766555556888877765 12 2 234445566666553 5999999863
No 55
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=88.17 E-value=2.3 Score=43.64 Aligned_cols=104 Identities=13% Similarity=0.099 Sum_probs=70.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ecc-CCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHH
Q psy15811 143 DSMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSA 216 (581)
Q Consensus 143 ~~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~-~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~ 216 (581)
+.++++. +++.++.+++.|||.|++ |.. -+.+|=+.+++. .-...+||++.. .+.+..++
T Consensus 42 g~ID~~~----l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~-~~~grvpViaGv---------g~~st~ea 107 (344)
T 2hmc_A 42 RTPDFDA----LVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER-LVKAGIPVIVGT---------GAVNTASA 107 (344)
T ss_dssp SSBCHHH----HHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH-HHHTTCCEEEEC---------CCSSHHHH
T ss_pred CCcCHHH----HHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH-HhCCCCcEEEec---------CCCCHHHH
Confidence 3577654 566778888899999876 422 366777777776 222468998743 23456677
Q ss_pred HHHHHhhCCCCceEEEeCCC---C-h--hhHHHHHHHHHh-hCCCCceEEec
Q psy15811 217 VTSCLLANPDQIQAIGVNCV---R-P--SHVSTLVRCIKQ-SHPTVQTIVYP 261 (581)
Q Consensus 217 ~~~~~~~~~~~~~~vGvNC~---~-p--~~~~~~l~~l~~-~~~~~p~~~~p 261 (581)
++.+..+...|++++.+-.- . | +.+....+.+.. . +++||++|-
T Consensus 108 i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa-~~lPiilYn 158 (344)
T 2hmc_A 108 VAHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAA-PEIPAVIYN 158 (344)
T ss_dssp HHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHS-TTSCEEEEE
T ss_pred HHHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhC-CCCcEEEEe
Confidence 76555444678999988662 2 2 556677777776 5 789999993
No 56
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=88.17 E-value=2.6 Score=42.68 Aligned_cols=106 Identities=17% Similarity=0.139 Sum_probs=70.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cccC-CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHH
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISS 471 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~-----ET~p-~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~ 471 (581)
.++.+. ++..++.+.+.|||.|++ |... +.+|-+.+++.+.+. ..+||++.. .+.+..+
T Consensus 41 ~iD~~~----l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---------g~~~t~~ 107 (315)
T 3na8_A 41 GLDLPA----LGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSV---------SDLTTAK 107 (315)
T ss_dssp SBCHHH----HHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSHHH
T ss_pred CcCHHH----HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHH
Confidence 355544 456677777899998764 3222 267777777777653 358999876 2346677
Q ss_pred HHHHHHhhCCCCceEEEECC-C----CCccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 472 AVTSCLLANPDQIQAIGVNC-V----RPSHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 472 ~~~~l~~~~~~~~~~iGiNC-~----~p~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
+++..+.....+++++.+-. . +.+.+....+.+.... ++|+++|-+-
T Consensus 108 ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilYn~P 159 (315)
T 3na8_A 108 TVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAI-GVPVMLYNNP 159 (315)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHC-SSCEEEEECH
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC-CCcEEEEeCc
Confidence 77766555567888887765 1 2234555667777776 6999999864
No 57
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=87.80 E-value=2 Score=43.03 Aligned_cols=101 Identities=10% Similarity=0.104 Sum_probs=64.3
Q ss_pred HHHHHHHHHHhCCCCEEEe-----cccC-CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhC
Q psy15811 409 WHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN 480 (581)
Q Consensus 409 ~~~~~~~~l~~~gvD~i~~-----ET~p-~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~ 480 (581)
.++..++.+.+.|||.|++ |... +.+|-+.+++.+.+. ..+||++... +.+..++++..+...
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg---------~~~t~~ai~la~~a~ 93 (291)
T 3a5f_A 23 KLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTG---------SNNTAASIAMSKWAE 93 (291)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------cccHHHHHHHHHHHH
Confidence 3456677777899999876 4322 266777777776643 3589998772 346677777665555
Q ss_pred CCCceEEEECC-C--CC--ccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 481 PDQIQAIGVNC-V--RP--SHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 481 ~~~~~~iGiNC-~--~p--~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
..+++++.+-. . .| +.+....+.+.... +.|+++|-+-
T Consensus 94 ~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~-~lPiilYn~P 136 (291)
T 3a5f_A 94 SIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAV-STPIIIYNVP 136 (291)
T ss_dssp HTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGC-CSCEEEEECH
T ss_pred hcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEeCc
Confidence 66888777765 1 22 22333344555555 6999999864
No 58
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=87.72 E-value=3.2 Score=41.71 Aligned_cols=105 Identities=15% Similarity=0.137 Sum_probs=70.4
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEec-ccC-----CHHHHHHHHHHHHhc--C-CCeEEEEEEEcCCCcCCCCCcHHH
Q psy15811 401 MTEADLIAWHRPNVEALVRAGVDYLALE-TIP-----AEKEALALVKLLREF--P-GQKAWLSFSCKDDTHTSHGELISS 471 (581)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~~gvD~i~~E-T~p-----~~~Ea~a~~~~~~~~--~-~~pv~iSft~~~~~~l~~G~~~~~ 471 (581)
++.+. ++..++.+.+.|||.|++= |.. +.+|-+.+++.+.+. . .+||++.. .+.+..+
T Consensus 25 iD~~~----l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGv---------g~~~t~~ 91 (301)
T 3m5v_A 25 VDEQS----YARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGA---------GSNATHE 91 (301)
T ss_dssp ECHHH----HHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEEC---------CCSSHHH
T ss_pred CCHHH----HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeC---------CCCCHHH
Confidence 55544 4566777778999998762 222 267777777777653 2 58999876 2356777
Q ss_pred HHHHHHhhCCCCceEEEECC---CCC--ccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 472 AVTSCLLANPDQIQAIGVNC---VRP--SHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 472 ~~~~l~~~~~~~~~~iGiNC---~~p--~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
+++..+.....+++++.+-. ..| +.+....+.+.... ++|+++|-+-
T Consensus 92 ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilYn~P 143 (301)
T 3m5v_A 92 AVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSV-DIPVLLYNVP 143 (301)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-SSCEEEEECH
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEEeCc
Confidence 77776555567888877765 122 34555667777776 7999999763
No 59
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=87.62 E-value=2.4 Score=42.51 Aligned_cols=101 Identities=18% Similarity=0.109 Sum_probs=66.5
Q ss_pred HHHHHHHHHHhCCCCEEEe-----cccC-CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhC
Q psy15811 409 WHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN 480 (581)
Q Consensus 409 ~~~~~~~~l~~~gvD~i~~-----ET~p-~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~ 480 (581)
.++..++.+.+.|||.|++ |... +.+|-+.+++.+.+. ..+||++... +.+..++++..+...
T Consensus 22 ~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~ai~la~~A~ 92 (297)
T 2rfg_A 22 ALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAG---------SNNPVEAVRYAQHAQ 92 (297)
T ss_dssp HHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC---------CSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccC---------CCCHHHHHHHHHHHH
Confidence 3456677777899999875 3222 266777777776642 3589998772 345677777665445
Q ss_pred CCCceEEEECC---CCC--ccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 481 PDQIQAIGVNC---VRP--SHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 481 ~~~~~~iGiNC---~~p--~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
..+++++.+-. ..| +.+....+.+.... ++|+++|-+-
T Consensus 93 ~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilYn~P 135 (297)
T 2rfg_A 93 QAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAI-DIPIIVYNIP 135 (297)
T ss_dssp HHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHC-SSCEEEEECH
T ss_pred hcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEeCc
Confidence 56788877765 122 33555567777766 6999999864
No 60
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=87.55 E-value=3 Score=42.00 Aligned_cols=118 Identities=14% Similarity=0.177 Sum_probs=76.1
Q ss_pred eEEeccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec-ccC-----CHHHHHHHHHHHHhc--
Q psy15811 375 QTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE-TIP-----AEKEALALVKLLREF-- 446 (581)
Q Consensus 375 ~VagsiGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l~~~gvD~i~~E-T~p-----~~~Ea~a~~~~~~~~-- 446 (581)
.++..+-|+.. + +.++.+. ++..++.+.+.|||.|++= |.. +.+|-+.+++.+.+.
T Consensus 19 v~~a~vTPf~~---d---------g~iD~~~----l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~ 82 (304)
T 3l21_A 19 LLTAMVTPFSG---D---------GSLDTAT----AARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVG 82 (304)
T ss_dssp EEEECCCCBCT---T---------SCBCHHH----HHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT
T ss_pred eEEEEECCCCC---C---------CCcCHHH----HHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhC
Confidence 45556777642 1 2355544 4566777778999987652 322 267777777777653
Q ss_pred CCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECC---CC--CccchHHHHHHHhhCCCCeEEEeeC
Q psy15811 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC---VR--PSHVSTLVRCIKQSHPTVQTIVYPN 518 (581)
Q Consensus 447 ~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC---~~--p~~~~~~l~~l~~~~~~~pl~~ypN 518 (581)
..+||+++.. +.+..++++..+.....+++++.+-. .. .+.+....+.+.... ++|+++|-+
T Consensus 83 grvpviaGvg---------~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilYn~ 149 (304)
T 3l21_A 83 DRARVIAGAG---------TYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADAT-ELPMLLYDI 149 (304)
T ss_dssp TTSEEEEECC---------CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSC-SSCEEEEEC
T ss_pred CCCeEEEeCC---------CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEeC
Confidence 3589998862 34567777766544556778777765 12 234555567777766 799999976
No 61
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=87.48 E-value=2.5 Score=42.57 Aligned_cols=107 Identities=16% Similarity=0.095 Sum_probs=68.4
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cccC-CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHH
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISS 471 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~-----ET~p-~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~ 471 (581)
.++.+. ++..++.+.+.|||.|++ |... +..|-+.+++.+.+. ..+||++.. .+.+..+
T Consensus 28 ~iD~~~----l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv---------g~~~t~~ 94 (303)
T 2wkj_A 28 ALDKAS----LRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHV---------GCVSTAE 94 (303)
T ss_dssp SBCHHH----HHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC---------CCSSHHH
T ss_pred CcCHHH----HHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHH
Confidence 355544 456677777799999876 3322 266777777776643 358999876 2345677
Q ss_pred HHHHHHhhCCCCceEEEECC---CCC--ccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 472 AVTSCLLANPDQIQAIGVNC---VRP--SHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 472 ~~~~l~~~~~~~~~~iGiNC---~~p--~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
+++..+.....+++++.+-. ..| +.+....+.+....+++|+++|-+-
T Consensus 95 ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P 147 (303)
T 2wkj_A 95 SQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIP 147 (303)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEECH
T ss_pred HHHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCc
Confidence 77666544456778777755 122 3355556677766523999999863
No 62
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=87.26 E-value=3.5 Score=41.77 Aligned_cols=106 Identities=17% Similarity=0.101 Sum_probs=69.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEec-ccC-----CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHH
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLALE-TIP-----AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISS 471 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~E-T~p-----~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~ 471 (581)
.++.+. ++..++.+.+.|||.|++= |.. +..|-+.+++.+.+. ..+||++.. .+.+..+
T Consensus 39 ~iD~~~----l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---------g~~st~~ 105 (315)
T 3si9_A 39 AIDEKA----FCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGA---------GSNSTSE 105 (315)
T ss_dssp CBCHHH----HHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSHHH
T ss_pred CcCHHH----HHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCCCHHH
Confidence 356544 4466777778999998742 222 267777777776643 358999877 2346777
Q ss_pred HHHHHHhhCCCCceEEEECC---C--CCccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 472 AVTSCLLANPDQIQAIGVNC---V--RPSHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 472 ~~~~l~~~~~~~~~~iGiNC---~--~p~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
+++..+.....+++++.+-. . +.+.+....+.+.... ++|+++|-+-
T Consensus 106 ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~-~lPiilYn~P 157 (315)
T 3si9_A 106 AVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAI-SIPIIIYNIP 157 (315)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-SSCEEEEECH
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcC-CCCEEEEeCc
Confidence 77766555556778777654 1 2234555667777776 7999999763
No 63
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=87.21 E-value=1.4 Score=44.37 Aligned_cols=118 Identities=15% Similarity=0.150 Sum_probs=79.1
Q ss_pred EEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEE-----EccC-CHHHHHHHHHHHHhc--
Q psy15811 119 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREF-- 190 (581)
Q Consensus 119 ~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~~-~~~E~~aa~~a~~~~-- 190 (581)
++..-+-|+.. .+.++++. +++.++.+++.|||.|++ |... +.+|=+.+++.+.+.
T Consensus 8 v~~a~vTPf~~------------dg~iD~~~----l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~ 71 (300)
T 3eb2_A 8 VFPYLVSPVDA------------EGRVRADV----MGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQ 71 (300)
T ss_dssp EEEBCCCCBCT------------TSCBCHHH----HHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHT
T ss_pred eEEEEeccCCC------------CCCcCHHH----HHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhC
Confidence 45556666654 13577644 566788888999999863 4322 677888888777653
Q ss_pred CCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCC-----CChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 191 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-----VRPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 191 ~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC-----~~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
..+||++.... .+..++++.+..+...|++++.+-. ...+.+....+.+... +++|+++|-+
T Consensus 72 grvpviaGvg~---------~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a-~~lPiilYn~ 138 (300)
T 3eb2_A 72 RRVPVVAGVAS---------TSVADAVAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADA-VEIPVVIYTN 138 (300)
T ss_dssp TSSCBEEEEEE---------SSHHHHHHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHH-CSSCEEEEEC
T ss_pred CCCcEEEeCCC---------CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHH-CCCCEEEEEC
Confidence 35899986533 2355666655444467888888754 2356777788888776 7899999944
No 64
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=87.20 E-value=3.2 Score=41.98 Aligned_cols=105 Identities=12% Similarity=0.087 Sum_probs=69.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEec-ccC-----CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHH
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLALE-TIP-----AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISS 471 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~E-T~p-----~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~ 471 (581)
.++.+. ++..++.+.+.|||.|++= |.. +.+|-+.+++.+.+. ..+||++.. .+.+..+
T Consensus 40 ~iD~~~----l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---------g~~st~e 106 (314)
T 3qze_A 40 RLDWDS----LAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGT---------GANSTRE 106 (314)
T ss_dssp CBCHHH----HHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHH
T ss_pred CcCHHH----HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCcCHHH
Confidence 356544 4566666777899987662 222 267777777776643 358999876 2346777
Q ss_pred HHHHHHhhCCCCceEEEECC---CCC--ccchHHHHHHHhhCCCCeEEEeeC
Q psy15811 472 AVTSCLLANPDQIQAIGVNC---VRP--SHVSTLVRCIKQSHPTVQTIVYPN 518 (581)
Q Consensus 472 ~~~~l~~~~~~~~~~iGiNC---~~p--~~~~~~l~~l~~~~~~~pl~~ypN 518 (581)
+++..+.....+++++.+-. ..| +.+....+.+.... ++|+++|-+
T Consensus 107 ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilYn~ 157 (314)
T 3qze_A 107 AVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAV-AIPQILYNV 157 (314)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHS-CSCEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEeC
Confidence 77766555566788777655 122 34555667777776 799999976
No 65
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=87.17 E-value=2.4 Score=43.49 Aligned_cols=106 Identities=15% Similarity=0.177 Sum_probs=69.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cccC-CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHH
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISS 471 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~-----ET~p-~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~ 471 (581)
.++.+. ++..++.+.+.|||.|++ |... +.+|-+.+++.+.+. ..+||++... +.+..+
T Consensus 48 ~ID~~~----l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg---------~~st~e 114 (343)
T 2v9d_A 48 QLDKPG----TAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTG---------GTNARE 114 (343)
T ss_dssp SBCHHH----HHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------SSCHHH
T ss_pred CcCHHH----HHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CCCHHH
Confidence 355544 456677777899999875 3222 266777777777643 3589998772 345677
Q ss_pred HHHHHHhhCCCCceEEEECC---C--CCccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 472 AVTSCLLANPDQIQAIGVNC---V--RPSHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 472 ~~~~l~~~~~~~~~~iGiNC---~--~p~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
+++..+.....+++++.+-. . +.+.+....+.+.... ++|+++|-+-
T Consensus 115 ai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~-~lPiilYn~P 166 (343)
T 2v9d_A 115 TIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSV-TLPVMLYNFP 166 (343)
T ss_dssp HHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTC-SSCEEEEECH
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEeCc
Confidence 77766544456778777765 1 2234555567777766 6999999874
No 66
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=87.13 E-value=4.2 Score=40.73 Aligned_cols=106 Identities=12% Similarity=0.106 Sum_probs=70.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-cccC-----CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHH
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLAL-ETIP-----AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISS 471 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~-ET~p-----~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~ 471 (581)
.++.+. ++..++.+.+.|||.|++ -|.. +..|-+.+++.+.+. ..+||++.. .+.+..+
T Consensus 24 ~iD~~~----l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~ 90 (297)
T 3flu_A 24 SIHYEQ----LRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGT---------GANNTVE 90 (297)
T ss_dssp CBCHHH----HHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHH
T ss_pred CcCHHH----HHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCcCHHH
Confidence 355544 456677777899998765 2332 267777777777653 358999876 2356777
Q ss_pred HHHHHHhhCCCCceEEEECC---CCC--ccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 472 AVTSCLLANPDQIQAIGVNC---VRP--SHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 472 ~~~~l~~~~~~~~~~iGiNC---~~p--~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
+++..+.....+++++.+-. ..| +.+....+.+.... +.|+++|-+-
T Consensus 91 ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~-~lPiilYn~P 142 (297)
T 3flu_A 91 AIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEAT-SIPMIIYNVP 142 (297)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-CSCEEEEECH
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEEECC
Confidence 77766555556778777655 123 33555567777776 7999999763
No 67
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=87.11 E-value=11 Score=37.66 Aligned_cols=185 Identities=14% Similarity=0.093 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCCCceEEec--cCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEE
Q psy15811 349 WHRPNVEALVRAGVDYLALIKPSISSQTAAS--IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 426 (581)
Q Consensus 349 l~~~av~lA~~A~~~~~~~~~~~~~v~Vags--iGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l~~~gvD~i~ 426 (581)
+..++++..+++.- ...|... +-||-.+=+.|-- + .+.++.++..+.+.+++-...++|+|+|.
T Consensus 97 ~v~rair~iK~~~p----------dl~vitDvcLc~YT~HGHcGil---~-~g~V~ND~Tl~~Lak~Als~A~AGAdiVA 162 (323)
T 1l6s_A 97 LVARMSRICKQTVP----------EMIVMSDTCFCEYTSHGHCGVL---C-EHGVDNDATLENLGKQAVVAAAAGADFIA 162 (323)
T ss_dssp HHHHHHHHHHHHCT----------TSEEEEEECSTTTBSSCCSSCB---C-SSSBCHHHHHHHHHHHHHHHHHHTCSEEE
T ss_pred cHHHHHHHHHHHCC----------CeEEEEeeeccccCCCCceEec---c-CCcCccHHHHHHHHHHHHHHHHcCCCeEe
Confidence 55667766665421 2455544 5576543333311 0 12378899999999999999999999999
Q ss_pred ecccCCHHHHHHHHHHHHh--cCCCeEEEEEEEcC-------------C---C----cCCCCCcHHHHHHHHHhhCCCCc
Q psy15811 427 LETIPAEKEALALVKLLRE--FPGQKAWLSFSCKD-------------D---T----HTSHGELISSAVTSCLLANPDQI 484 (581)
Q Consensus 427 ~ET~p~~~Ea~a~~~~~~~--~~~~pv~iSft~~~-------------~---~----~l~~G~~~~~~~~~l~~~~~~~~ 484 (581)
=-.|-+- ...++.+++.+ +.+++++ |.+.+- . | .-++--.-.++++.+.....-++
T Consensus 163 PSdMMDG-rV~aIR~aLd~~G~~~v~Im-sYsaKyASafYGPFRdAa~Sap~GDRktYQmdpaN~~EAlre~~~Di~EGA 240 (323)
T 1l6s_A 163 PSAAMDG-QVQAIRQALDAAGFKDTAIM-SYSTKFASSFYGPFREAAGSALKGDRKSYQMNPMNRREAIRESLLDEAQGA 240 (323)
T ss_dssp ECSCCTT-HHHHHHHHHHHTTCTTCEEB-CCCEEBCCSCCHHHHHHHTCCCSSCCTTTSBCTTCHHHHHHHHHHHHHTTC
T ss_pred ccccccc-HHHHHHHHHHhCCCCCceee-ehhHHHhHHhhHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCC
Confidence 6666652 23455566664 3455644 665541 0 1 11122223445544422223456
Q ss_pred eEEEECCCCCccchHHHHHHHhhCCCCeEEEeeCCCC---CcccccccccCCcCHHHHHHHHHHHHHcCCcEE
Q psy15811 485 QAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGG---VWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554 (581)
Q Consensus 485 ~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~ypNag~---~~~~~~~~~~~~~~~~~~~~~~~~w~~~G~~ii 554 (581)
+.|.|.=..| .+.+++.++... +.|+.+|--+|+ ..-....+|.+. ..-+.|....+..+|+.+|
T Consensus 241 D~vMVKPal~--YLDIi~~vk~~~-~~P~aaYqVSGEYAMikaAa~~GwiD~--~~~vlEsl~~~kRAGAd~I 308 (323)
T 1l6s_A 241 DCLMVKPAGA--YLDIVRELRERT-ELPIGAYQVSGEYAMIKFAALAGAIDE--EKVVLESLGSIKRAGADLI 308 (323)
T ss_dssp SBEEEESCTT--CHHHHHHHHTTC-SSCEEEEECHHHHHHHHHHHHTTSSCH--HHHHHHHHHHHHHTTCSEE
T ss_pred ceEEEecCcc--hhHHHHHHHHhc-CCCeEEEEcCcHHHHHHHHHHcCCccH--HHHHHHHHHHHHhcCCCEE
Confidence 7777765333 356777888776 799999999985 111222568663 3357788888889999876
No 68
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=86.94 E-value=3.5 Score=41.68 Aligned_cols=107 Identities=14% Similarity=0.115 Sum_probs=69.9
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEec-c----c-CCHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHH
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLALE-T----I-PAEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISS 471 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~E-T----~-p~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~ 471 (581)
.++.+. ++..++.+.+.|||.|++= | . =+..|-+.+++.+.+. ..+||++.. .+ +..+
T Consensus 29 ~iD~~~----l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv---------g~-st~~ 94 (314)
T 3d0c_A 29 EIDWKG----LDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGI---------GY-SVDT 94 (314)
T ss_dssp CBCHHH----HHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE---------CS-SHHH
T ss_pred CCCHHH----HHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecC---------Cc-CHHH
Confidence 355544 4566777777999998752 2 1 1266777777776643 358999887 23 6677
Q ss_pred HHHHHHhhCCCCceEEEECC-C--CC--ccchHHHHHHHhhCCCCeEEEeeCCCC
Q psy15811 472 AVTSCLLANPDQIQAIGVNC-V--RP--SHVSTLVRCIKQSHPTVQTIVYPNKGG 521 (581)
Q Consensus 472 ~~~~l~~~~~~~~~~iGiNC-~--~p--~~~~~~l~~l~~~~~~~pl~~ypNag~ 521 (581)
+++..+.....+++++.+-. . .| +.+....+.+.... ++|+++|-..|.
T Consensus 95 ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilYn~tg~ 148 (314)
T 3d0c_A 95 AIELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEAL-DAPSIIYFKDAH 148 (314)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHS-SSCEEEEECCTT
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEEeCCCC
Confidence 77766555566888877765 1 22 33555567777766 699999984443
No 69
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=86.65 E-value=29 Score=35.07 Aligned_cols=188 Identities=11% Similarity=-0.000 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCCCceEEe--ccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEE
Q psy15811 349 WHRPNVEALVRAGVDYLALIKPSISSQTAA--SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 426 (581)
Q Consensus 349 l~~~av~lA~~A~~~~~~~~~~~~~v~Vag--siGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l~~~gvD~i~ 426 (581)
+..++++..+++.- ..+|.. ++-||-..=+.|--- -.+.++.++..+.+.+++-...++|+|+|.
T Consensus 111 ~v~rair~iK~~~p----------dl~VitDvcLc~YT~HGHcGil~---~~g~V~ND~Tl~~Lak~Als~A~AGAdiVA 177 (342)
T 1h7n_A 111 PVIQGIKFIREYFP----------ELYIICDVCLCEYTSHGHCGVLY---DDGTINRERSVSRLAAVAVNYAKAGAHCVA 177 (342)
T ss_dssp HHHHHHHHHHHHCT----------TSEEEEEECSTTTBTTCCSSCBC---TTSSBCHHHHHHHHHHHHHHHHHHTCSEEE
T ss_pred hHHHHHHHHHHHCC----------CeEEEEeeecccccCCCceeEEC---CCCcCccHHHHHHHHHHHHHHHHcCCCeee
Confidence 55677766665421 245554 455765433332110 012378899999999999999999999999
Q ss_pred ecccCCHHHHHHHHHHHHh--c-CCCeEEEEEEEcC--------------C---C----cCCCCCcHHHHHHHHHhhCCC
Q psy15811 427 LETIPAEKEALALVKLLRE--F-PGQKAWLSFSCKD--------------D---T----HTSHGELISSAVTSCLLANPD 482 (581)
Q Consensus 427 ~ET~p~~~Ea~a~~~~~~~--~-~~~pv~iSft~~~--------------~---~----~l~~G~~~~~~~~~l~~~~~~ 482 (581)
=-.|-+- ...++.+++.+ + .+++ ++|.+.+- . | .-++--.-.++++.+.....-
T Consensus 178 PSdMMDG-rV~aIR~aLd~~G~~~~v~-ImsYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~E 255 (342)
T 1h7n_A 178 PSDMIDG-RIRDIKRGLINANLAHKTF-VLSYAAKFSGNLYGPFRDAACSAPSNGDRKCYQLPPAGRGLARRALERDMSE 255 (342)
T ss_dssp ECCCCTT-HHHHHHHHHHHTTCTTTCE-EEEEEEEBCSSCCHHHHHHHTCCCSSSCSTTTSBCTTCHHHHHHHHHHHHHT
T ss_pred ccccccc-HHHHHHHHHHHCCCccCce-EeechHHHhHHhhHHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHh
Confidence 6666662 34556666664 3 3455 55887651 0 0 112222234555544222234
Q ss_pred CceEEEECCCCCccchHHHHHHHhhCCCCeEEEeeCCCC---CcccccccccCCcCHHHHHHHHHHHHHcCCcEEe
Q psy15811 483 QIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGG---VWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555 (581)
Q Consensus 483 ~~~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~ypNag~---~~~~~~~~~~~~~~~~~~~~~~~~w~~~G~~iiG 555 (581)
+++.|.|.=..| .+.+++.++...+++|+.+|--+|+ ..-....+|.+. ..-+.|....+..+|+.+|=
T Consensus 256 GAD~vMVKPal~--YLDIi~~vk~~~p~~P~aaYqVSGEYAMikaAa~~GwiD~--~~~v~Esl~~~kRAGAd~Ii 327 (342)
T 1h7n_A 256 GADGIIVKPSTF--YLDIMRDASEICKDLPICAYHVSGEYAMLHAAAEKGVVDL--KTIAFESHQGFLRAGARLII 327 (342)
T ss_dssp TCSEEEEESSGG--GHHHHHHHHHHTTTSCEEEEECHHHHHHHHHHHHTTSSCH--HHHHHHHHHHHHHTTCSEEE
T ss_pred CCCeEEEecCcc--HHHHHHHHHHhccCCCeEEEEcCcHHHHHHHHHHcCCccH--HHHHHHHHHHHHhcCCCEEE
Confidence 667777765332 4567777877765799999999985 111222568654 33577778888889988773
No 70
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=86.58 E-value=2.4 Score=42.91 Aligned_cols=104 Identities=18% Similarity=0.181 Sum_probs=68.5
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEec-cc----C-CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHH
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLALE-TI----P-AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISS 471 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~E-T~----p-~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~ 471 (581)
.++.+ .++..++.+.+.|||.|++= |. . +..|-+.+++.+.+. ..+||++.. |.+..+
T Consensus 29 ~iD~~----~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGv----------g~~t~~ 94 (316)
T 3e96_A 29 SIDWH----HYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGI----------GYATST 94 (316)
T ss_dssp CBCHH----HHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE----------CSSHHH
T ss_pred CCCHH----HHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEe----------CcCHHH
Confidence 35554 45567777778999998753 22 1 267777777776643 358999886 235667
Q ss_pred HHHHHHhhCCCCceEEEECC-C----CCccchHHHHHHHhhCCCCeEEEeeC
Q psy15811 472 AVTSCLLANPDQIQAIGVNC-V----RPSHVSTLVRCIKQSHPTVQTIVYPN 518 (581)
Q Consensus 472 ~~~~l~~~~~~~~~~iGiNC-~----~p~~~~~~l~~l~~~~~~~pl~~ypN 518 (581)
+++..+.....+++++.+-. . +.+.+....+.+.... ++|+++|-+
T Consensus 95 ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilYn~ 145 (316)
T 3e96_A 95 AIELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEAL-DFPSLVYFK 145 (316)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHH-TSCEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEEeC
Confidence 77766544556778777754 1 2344555667777766 699999976
No 71
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=86.47 E-value=3.2 Score=41.56 Aligned_cols=106 Identities=13% Similarity=0.095 Sum_probs=68.2
Q ss_pred CCCHHHHHHHHHHHHHHHHh-CCCCEEEe-----cccC-CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHH
Q psy15811 400 SMTEADLIAWHRPNVEALVR-AGVDYLAL-----ETIP-AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELIS 470 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~-~gvD~i~~-----ET~p-~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~ 470 (581)
.++.+. ++..++.+.+ .|||.|++ |... +..|-+.+++.+.+. ..+||++.. .+.+..
T Consensus 20 ~iD~~~----l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~ 86 (293)
T 1f6k_A 20 TINEKG----LRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQV---------GSVNLK 86 (293)
T ss_dssp CBCHHH----HHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---------CCSCHH
T ss_pred CcCHHH----HHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEec---------CCCCHH
Confidence 355544 4566777778 99999875 3222 266777777776642 358999877 234567
Q ss_pred HHHHHHHhhCCCCceEEEECC---CCC--ccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 471 SAVTSCLLANPDQIQAIGVNC---VRP--SHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 471 ~~~~~l~~~~~~~~~~iGiNC---~~p--~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
++++..+.....+++++.+-. ..| +.+....+.+.... +.|+++|-+-
T Consensus 87 ~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~-~lPiilYn~P 139 (293)
T 1f6k_A 87 EAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAET-GSNMIVYSIP 139 (293)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHH-CCCEEEEECH
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEEECc
Confidence 777766544456778777755 122 33555556676665 6899999863
No 72
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=86.15 E-value=8.7 Score=38.21 Aligned_cols=105 Identities=9% Similarity=0.107 Sum_probs=69.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cccC-CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHH
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAV 473 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~-----ET~p-~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~ 473 (581)
.++.+. ++..++.+.+.|||.|++ |... +.+|-+.+++.+.+..+- |++.. .+.+..+++
T Consensus 16 ~iD~~~----l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-ViaGv---------g~~~t~~ai 81 (288)
T 2nuw_A 16 KVNVDA----LKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK-LIFQV---------GSLNLNDVM 81 (288)
T ss_dssp CBCHHH----HHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC-EEEEC---------CCSCHHHHH
T ss_pred CcCHHH----HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-eEEee---------CCCCHHHHH
Confidence 355544 456677777799999876 4222 277888888888864333 66554 235677787
Q ss_pred HHHHhhCCCCceEEEECC-C--C-C--ccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 474 TSCLLANPDQIQAIGVNC-V--R-P--SHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 474 ~~l~~~~~~~~~~iGiNC-~--~-p--~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
+..+.....+++++.+-. . . | +.+....+.+.... ++|+++|-+-
T Consensus 82 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~-~lPiilYn~P 132 (288)
T 2nuw_A 82 ELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARIS-SHSLYIYNYP 132 (288)
T ss_dssp HHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHC-CSCEEEEECH
T ss_pred HHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc-CCCEEEEECc
Confidence 777656677889887765 1 2 2 23445556777766 6999999864
No 73
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=85.71 E-value=4.7 Score=40.59 Aligned_cols=106 Identities=11% Similarity=0.023 Sum_probs=70.4
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cccC-CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHH
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISS 471 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~-----ET~p-~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~ 471 (581)
.++.+ .++..++.+.+.|||.|++ |... +.+|-+.+++.+.+. ..+||++... +.+..+
T Consensus 31 ~iD~~----~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg---------~~~t~~ 97 (307)
T 3s5o_A 31 EVDYG----KLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSG---------CESTQA 97 (307)
T ss_dssp CBCHH----HHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECC---------CSSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecC---------CCCHHH
Confidence 35555 4556677788899999865 3222 267878888887764 3579998762 346777
Q ss_pred HHHHHHhhCCCCceEEEECC-C------CCccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 472 AVTSCLLANPDQIQAIGVNC-V------RPSHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 472 ~~~~l~~~~~~~~~~iGiNC-~------~p~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
+++..+.....+++++.+-. . +.+.+....+.+.... ++|+++|-+-
T Consensus 98 ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~-~lPiilYn~P 151 (307)
T 3s5o_A 98 TVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLS-PIPVVLYSVP 151 (307)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHC-SSCEEEEECH
T ss_pred HHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhc-CCCEEEEeCC
Confidence 77766555556888877754 1 1123555567777766 6999999873
No 74
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=85.57 E-value=3.9 Score=41.31 Aligned_cols=107 Identities=7% Similarity=0.031 Sum_probs=68.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEec-ccC-----CHHHHHHHHHHHHhc-CCCeEEEEEEEcCCCcCCCCCcHHHH
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLALE-TIP-----AEKEALALVKLLREF-PGQKAWLSFSCKDDTHTSHGELISSA 472 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~E-T~p-----~~~Ea~a~~~~~~~~-~~~pv~iSft~~~~~~l~~G~~~~~~ 472 (581)
.++.+. ++..++.+.+.|||.|++= |.. +..|-+.+++.+.+. ..+||++.. .+.+..++
T Consensus 25 ~iD~~~----l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGv---------g~~~t~~a 91 (313)
T 3dz1_A 25 KIDDVS----IDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGV---------SAPGFAAM 91 (313)
T ss_dssp CBCHHH----HHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEEC---------CCSSHHHH
T ss_pred CcCHHH----HHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEec---------CCCCHHHH
Confidence 355544 4566777778999987652 222 267777777777653 358999876 23467777
Q ss_pred HHHHHhhCCCCceEEEECC-C---CCccchHHHHHHHhhCC-CCeEEEeeCC
Q psy15811 473 VTSCLLANPDQIQAIGVNC-V---RPSHVSTLVRCIKQSHP-TVQTIVYPNK 519 (581)
Q Consensus 473 ~~~l~~~~~~~~~~iGiNC-~---~p~~~~~~l~~l~~~~~-~~pl~~ypNa 519 (581)
++..+.....+++++.+-. . +.+.+....+.+....+ ++|+++|-+-
T Consensus 92 i~la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~~~~lPiilYn~P 143 (313)
T 3dz1_A 92 RRLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIGDDVPWVLQDYP 143 (313)
T ss_dssp HHHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHCTTSCEEEEECH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhCCCCCcEEEEeCc
Confidence 7766544556778877744 1 22334455566766552 3999999763
No 75
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=85.54 E-value=4.4 Score=40.92 Aligned_cols=118 Identities=14% Similarity=0.034 Sum_probs=77.9
Q ss_pred EEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEEE-ccC-----CHHHHHHHHHHHHhc--
Q psy15811 119 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE-TIP-----AEKEALALVKLLREF-- 190 (581)
Q Consensus 119 ~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~E-T~~-----~~~E~~aa~~a~~~~-- 190 (581)
++..-+-|+..- +.++++ .+++.++.+++.|||.|++= |-. +.+|=+.+++.+.+.
T Consensus 11 v~~a~vTPf~~d------------g~iD~~----~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~ 74 (311)
T 3h5d_A 11 IITAFITPFHED------------GSINFD----AIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVN 74 (311)
T ss_dssp EEEECCCCBCTT------------SSBCTT----HHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSC
T ss_pred eEEeeecCCCCC------------CCcCHH----HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC
Confidence 445567776541 245554 45667888889999987643 322 677888888887754
Q ss_pred CCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCc-eEEEeCCC-----ChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 191 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI-QAIGVNCV-----RPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 191 ~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~-~~vGvNC~-----~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
..+||++.. .+.+..++++.+..+...|+ +++.+-.- ..+.+....+.+... .++|+++|=+
T Consensus 75 grvpViaGv---------g~~~t~~ai~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a-~~lPiilYn~ 142 (311)
T 3h5d_A 75 GRVPLIAGV---------GTNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADA-SDLPIIIYNI 142 (311)
T ss_dssp SSSCEEEEC---------CCSSHHHHHHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHS-CSSCEEEEEC
T ss_pred CCCcEEEeC---------CCcCHHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHh-CCCCEEEEec
Confidence 358998743 22356677765544445665 88877651 346677777888775 7899999943
No 76
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=85.26 E-value=6.1 Score=39.29 Aligned_cols=104 Identities=11% Similarity=0.109 Sum_probs=67.2
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----cccC-CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHH
Q psy15811 401 MTEADLIAWHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVT 474 (581)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~~gvD~i~~-----ET~p-~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~ 474 (581)
++.+. ++..++.+.+.|||.|++ |... +..|-+.+++.+.+..+- |++.. .+.+..++++
T Consensus 16 iD~~~----l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gv---------g~~~t~~ai~ 81 (286)
T 2r91_A 16 LDPEL----FANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR-VIVQV---------ASLNADEAIA 81 (286)
T ss_dssp ECHHH----HHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS-EEEEC---------CCSSHHHHHH
T ss_pred cCHHH----HHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-EEEee---------CCCCHHHHHH
Confidence 55544 456677777899999876 3222 267778888887764333 66554 2346677777
Q ss_pred HHHhhCCCCceEEEECC---CC-C--ccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 475 SCLLANPDQIQAIGVNC---VR-P--SHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 475 ~l~~~~~~~~~~iGiNC---~~-p--~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
..+.....+++++.+-. .. | +.+....+.+.... +.|+++|-+-
T Consensus 82 la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~-~lPiilYn~P 131 (286)
T 2r91_A 82 LAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAV-SIPVFLYNYP 131 (286)
T ss_dssp HHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHC-SSCEEEEECH
T ss_pred HHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc-CCCEEEEeCh
Confidence 66555567888777765 12 2 23444556777766 6999999863
No 77
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=85.21 E-value=11 Score=37.63 Aligned_cols=105 Identities=15% Similarity=0.203 Sum_probs=68.5
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cccC-CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHH
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAV 473 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~-----ET~p-~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~ 473 (581)
.++.+. ++..++.+.+.|||.|++ |... +..|-+.+++.+.+..+- |++.. .+.+..+++
T Consensus 16 ~iD~~~----l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g-viaGv---------g~~~t~~ai 81 (293)
T 1w3i_A 16 RIDKEK----LKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK-IIFQV---------GGLNLDDAI 81 (293)
T ss_dssp SBCHHH----HHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC-EEEEC---------CCSCHHHHH
T ss_pred CcCHHH----HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC-EEEec---------CCCCHHHHH
Confidence 355544 446677777799998775 3222 267888888888864333 55554 235677888
Q ss_pred HHHHhhCCCCceEEEECC---CC-C--ccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 474 TSCLLANPDQIQAIGVNC---VR-P--SHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 474 ~~l~~~~~~~~~~iGiNC---~~-p--~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
+..+.....+++++.+-. .. | +.+....+.+.... ++|+++|-+-
T Consensus 82 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~-~lPiilYn~P 132 (293)
T 1w3i_A 82 RLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVS-PHPVYLYNYP 132 (293)
T ss_dssp HHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHC-SSCEEEEECH
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhC-CCCEEEEECc
Confidence 777666667888877765 12 2 23445556777766 6999999863
No 78
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=85.10 E-value=4.2 Score=40.62 Aligned_cols=105 Identities=13% Similarity=0.079 Sum_probs=69.4
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-cccC-----CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHH
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLAL-ETIP-----AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISS 471 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~-ET~p-----~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~ 471 (581)
.++.+.+ +..++.+.+.|||.|++ -|.. +.+|-+.+++.+.+. ..+||++... +.+..+
T Consensus 18 ~iD~~~l----~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg---------~~~t~~ 84 (291)
T 3tak_A 18 GVDWKSL----EKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTG---------ANSTRE 84 (291)
T ss_dssp CBCHHHH----HHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSSHHH
T ss_pred CcCHHHH----HHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCC---------CCCHHH
Confidence 3565444 45667777789998764 3433 377878888877753 3589998762 346677
Q ss_pred HHHHHHhhCCCCceEEEECC---CCC--ccchHHHHHHHhhCCCCeEEEeeC
Q psy15811 472 AVTSCLLANPDQIQAIGVNC---VRP--SHVSTLVRCIKQSHPTVQTIVYPN 518 (581)
Q Consensus 472 ~~~~l~~~~~~~~~~iGiNC---~~p--~~~~~~l~~l~~~~~~~pl~~ypN 518 (581)
+++..+.....+++++.+-. ..| +.+....+.+.... +.|+++|-+
T Consensus 85 ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~-~lPiilYn~ 135 (291)
T 3tak_A 85 AIELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAV-ELPLILYNV 135 (291)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-CSCEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEec
Confidence 77766544456778776654 122 34555667777776 799999976
No 79
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=84.85 E-value=14 Score=37.04 Aligned_cols=185 Identities=15% Similarity=0.162 Sum_probs=108.9
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCCCceEEec--cCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEE
Q psy15811 349 WHRPNVEALVRAGVDYLALIKPSISSQTAAS--IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 426 (581)
Q Consensus 349 l~~~av~lA~~A~~~~~~~~~~~~~v~Vags--iGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l~~~gvD~i~ 426 (581)
+..++++..+++.- ..+|... +-||..+=+.|-- + .+.++.++..+.+.+++-...++|+|+|.
T Consensus 103 ~v~rair~iK~~~p----------~l~vitDvcLc~YT~HGHcGil---~-~g~V~ND~Tl~~L~k~Als~A~AGADiVA 168 (328)
T 1w1z_A 103 ILQQAIRAIKKAVP----------ELCIMTDVALDPFTPFGHDGLV---K-DGIILNDETVEVLQKMAVSHAEAGADFVS 168 (328)
T ss_dssp HHHHHHHHHHHHST----------TSEEEEEECSTTTSTTSCSSEE---S-SSCEEHHHHHHHHHHHHHHHHHHTCSEEE
T ss_pred hHHHHHHHHHHHCC----------CeEEEEeeecccCCCCCceeec---c-CCcCccHHHHHHHHHHHHHHHHcCCCeEe
Confidence 56777766665431 2455544 5576543332211 0 12367889999999999999999999999
Q ss_pred ecccCCHHHHHHHHHHHHh--cCCCeEEEEEEEcC--------------C---C----cCCCCCcHHHHHHHHHhhCCCC
Q psy15811 427 LETIPAEKEALALVKLLRE--FPGQKAWLSFSCKD--------------D---T----HTSHGELISSAVTSCLLANPDQ 483 (581)
Q Consensus 427 ~ET~p~~~Ea~a~~~~~~~--~~~~pv~iSft~~~--------------~---~----~l~~G~~~~~~~~~l~~~~~~~ 483 (581)
=-.|-+- ...++.+++.+ +.++|+ +|.+.+= . | .-++--.-.++++.+.....-+
T Consensus 169 PSdMMDG-rV~aIR~aLd~~G~~~v~I-msYsaKyASafYGPFRdAa~Sap~fGDrktYQmdpaN~~EAlrE~~~Di~EG 246 (328)
T 1w1z_A 169 PSDMMDG-RIGAIREALDETDHSDVGI-LSYAAKYASSFYGPFRDALHSAPQFGDKSTYQMNPANTEEAMKEVELDIVEG 246 (328)
T ss_dssp ECSCCTT-HHHHHHHHHHHTTCTTSEE-EEEEEEBCCTTCHHHHHHTTCCCCCSCSTTTSBCTTCSHHHHHHHHHHHHHT
T ss_pred ccccccc-HHHHHHHHHHhCCCCCcee-eehhHHHhhhccchHHHHhccCCCCCCccccCCCCCCHHHHHHHHHhhHHhC
Confidence 6666652 23455555554 345664 4777651 0 1 0111111223444332112235
Q ss_pred ceEEEECCCCCccchHHHHHHHhhCCCCeEEEeeCCCC---CcccccccccCCcCHHHHHHHHHHHHHcCCcEE
Q psy15811 484 IQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGG---VWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554 (581)
Q Consensus 484 ~~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~ypNag~---~~~~~~~~~~~~~~~~~~~~~~~~w~~~G~~ii 554 (581)
++.|.|.=..| .+.+++.++... ++|+.+|--+|+ ..-....+|.+. ..-+.|....+..+|+.+|
T Consensus 247 AD~vMVKPal~--YLDIir~vk~~~-~~P~aaYqVSGEYAMikaAa~~GwiD~--~~~v~Esl~~~kRAGAd~I 315 (328)
T 1w1z_A 247 ADIVMVKPGLA--YLDIVWRTKERF-DVPVAIYHVSGEYAMVKAAAAKGWIDE--DRVMMESLLCMKRAGADII 315 (328)
T ss_dssp CSEEEEESCGG--GHHHHHHHHHHH-CSCEEEEECHHHHHHHHHHHHTTSSCH--HHHHHHHHHHHHHHTCSEE
T ss_pred CCEEEEcCCCc--hHHHHHHHHHhc-CCCEEEEEccHHHHHHHHHHHcCCccH--HHHHHHHHHHHHhcCCCEE
Confidence 57777765222 456677777766 799999999985 111222568663 3356777788888898876
No 80
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=84.64 E-value=15 Score=37.38 Aligned_cols=98 Identities=11% Similarity=0.044 Sum_probs=63.6
Q ss_pred HHHHHHCCCcEEEEEc-cCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC
Q psy15811 158 VEALVRAGVDYLALET-IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 236 (581)
Q Consensus 158 ~~~l~~~gvD~l~~ET-~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~ 236 (581)
++...++|||.+.+-+ .++.++++.+++.+++. ++.+..+++.. ...+++..++.+......|++.|.+-=+
T Consensus 99 i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~-G~~v~~~~~~a------~~~~~e~~~~ia~~~~~~Ga~~i~l~DT 171 (345)
T 1nvm_A 99 LKNAYQAGARVVRVATHCTEADVSKQHIEYARNL-GMDTVGFLMMS------HMIPAEKLAEQGKLMESYGATCIYMADS 171 (345)
T ss_dssp HHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHH-TCEEEEEEEST------TSSCHHHHHHHHHHHHHHTCSEEEEECT
T ss_pred HHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHC-CCEEEEEEEeC------CCCCHHHHHHHHHHHHHCCCCEEEECCC
Confidence 5556678999986654 33457888888888876 67666655322 2334444433332222467777777543
Q ss_pred ----ChhhHHHHHHHHHhhCC-CCceEEecC
Q psy15811 237 ----RPSHVSTLVRCIKQSHP-TVQTIVYPN 262 (581)
Q Consensus 237 ----~p~~~~~~l~~l~~~~~-~~p~~~~pn 262 (581)
.|..+.++++.+++... ++||.+...
T Consensus 172 ~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~H 202 (345)
T 1nvm_A 172 GGAMSMNDIRDRMRAFKAVLKPETQVGMHAH 202 (345)
T ss_dssp TCCCCHHHHHHHHHHHHHHSCTTSEEEEECB
T ss_pred cCccCHHHHHHHHHHHHHhcCCCceEEEEEC
Confidence 49999999999998732 788887654
No 81
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=84.36 E-value=4 Score=40.81 Aligned_cols=102 Identities=10% Similarity=0.103 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHhCCCCEEEec-ccC-----CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhh
Q psy15811 408 AWHRPNVEALVRAGVDYLALE-TIP-----AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 479 (581)
Q Consensus 408 ~~~~~~~~~l~~~gvD~i~~E-T~p-----~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~ 479 (581)
+.++..++.+.+.|||.|++= |.. +..|-+.+++.+.+. ..+||++... +.+..++++..+..
T Consensus 23 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~ai~la~~a 93 (292)
T 3daq_A 23 EALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTG---------TNDTEKSIQASIQA 93 (292)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------cccHHHHHHHHHHH
Confidence 345567777778999998752 222 267777777777653 3589998862 34566777766544
Q ss_pred CCCCceEEEECC---CCC--ccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 480 NPDQIQAIGVNC---VRP--SHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 480 ~~~~~~~iGiNC---~~p--~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
...+++++.+-. ..| +.+....+.+.... ++|+++|-+-
T Consensus 94 ~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~-~lPiilYn~P 137 (292)
T 3daq_A 94 KALGADAIMLITPYYNKTNQRGLVKHFEAIADAV-KLPVVLYNVP 137 (292)
T ss_dssp HHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHH-CSCEEEEECH
T ss_pred HHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEEecc
Confidence 455777776655 122 33555567777666 6999999763
No 82
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=84.12 E-value=16 Score=36.88 Aligned_cols=139 Identities=16% Similarity=0.139 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHhCCCCEE-EecccC---C--------HHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHH
Q psy15811 406 LIAWHRPNVEALVRAGVDYL-ALETIP---A--------EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAV 473 (581)
Q Consensus 406 ~~~~~~~~~~~l~~~gvD~i-~~ET~p---~--------~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~ 473 (581)
+.+...+.++.+.++|+|.| ++++.. + ..-.+.+++.+++.+++|++ +|+| |. ...+
T Consensus 177 i~~~~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~g~~~i-~~~~--------g~--~~~l 245 (338)
T 2eja_A 177 LTETVLAYLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISELKDFSDTPVI-YFFR--------GS--SSFI 245 (338)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHCCCCEE-EEES--------SH--HHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhcCCCCEE-EEcC--------Cc--HHHH
Confidence 34444555666667999987 456542 2 22344556666653478854 5655 22 2344
Q ss_pred HHHHhhCCCCceEEEECC-CCCccchHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHHHc-CC
Q psy15811 474 TSCLLANPDQIQAIGVNC-VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEE-GV 551 (581)
Q Consensus 474 ~~l~~~~~~~~~~iGiNC-~~p~~~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~~-G~ 551 (581)
..+ ...+++++++.- ++ +..+-+.+ -+.++-|-- .. .. ..++++..+.+++.++. |.
T Consensus 246 ~~l---~~~g~d~~~~d~~~d---l~~~~~~~-------~~~l~Gn~d----p~---~l-~gt~e~i~~~v~~~l~~~g~ 304 (338)
T 2eja_A 246 DLA---VDYRADALSVDWSVD---IPELFKIY-------DKGFQGNLE----PA---VL-YASEEVIEEKTLGLLRRIPV 304 (338)
T ss_dssp HHH---TTSCCSEEECCTTSC---HHHHHHHC-------CSEEECCBC----GG---GG-GSCHHHHHHHHHHHHTTCCC
T ss_pred HHH---HHcCCCEEEeCCCCC---HHHHHHhC-------CeEEEECCC----HH---Hh-cCCHHHHHHHHHHHHHHhCC
Confidence 455 345678888765 23 22222222 133444532 11 11 24578899999999875 54
Q ss_pred ---cEEeecCC----CchHHHHHHHHHHhccc
Q psy15811 552 ---NIIGGCCE----VTSYEIQQMRIMIDEFN 576 (581)
Q Consensus 552 ---~iiGGCCG----t~P~hI~al~~~l~~~~ 576 (581)
-|++--|| |.|++++++.+.++++.
T Consensus 305 ~~g~I~~~g~gi~~~~p~en~~a~v~~v~~~~ 336 (338)
T 2eja_A 305 KTRYVFNLGHGLAPDMELEKVKYLVDLVKSFP 336 (338)
T ss_dssp SSSEEBCBSSCCCTTSCHHHHHHHHHHHHTCC
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence 47776675 68899999999998753
No 83
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=84.03 E-value=4.5 Score=41.77 Aligned_cols=115 Identities=12% Similarity=-0.006 Sum_probs=74.1
Q ss_pred EEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEE-----EccC-CHHHHHHHHHHHHhc--
Q psy15811 119 ETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREF-- 190 (581)
Q Consensus 119 ~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET~~-~~~E~~aa~~a~~~~-- 190 (581)
++..-+-|+.+ .+.++++ .+++.++.+++.|||.|++ |... +.+|=+.+++.+.+.
T Consensus 63 i~~alvTPF~~------------dg~ID~~----al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~ 126 (360)
T 4dpp_A 63 VITAIKTPYLP------------DGRFDLE----AYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFG 126 (360)
T ss_dssp EEEECCCCBCT------------TSSBCHH----HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT
T ss_pred eEEEEeCcCCC------------CCCcCHH----HHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhC
Confidence 55667778764 1356765 4566778888999999888 5332 667777777766543
Q ss_pred CCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC-----ChhhHHHHHHHHHhhCCCCceEEec
Q psy15811 191 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV-----RPSHVSTLVRCIKQSHPTVQTIVYP 261 (581)
Q Consensus 191 ~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~-----~p~~~~~~l~~l~~~~~~~p~~~~p 261 (581)
..+||++.. .+.+..++++.+..+...|++++.+=.- ..+.+....+.+.. ..|+++|=
T Consensus 127 grvpViaGv---------g~~st~eai~la~~A~~~Gadavlvv~PyY~k~sq~gl~~hf~~IA~---a~PiilYN 190 (360)
T 4dpp_A 127 GSIKVIGNT---------GSNSTREAIHATEQGFAVGMHAALHINPYYGKTSIEGLIAHFQSVLH---MGPTIIYN 190 (360)
T ss_dssp TTSEEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHTTGG---GSCEEEEE
T ss_pred CCCeEEEec---------CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHH---hCCEEEEe
Confidence 358988733 2345677776655555688998888662 23444455555544 26999883
No 84
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=83.49 E-value=6 Score=40.07 Aligned_cols=103 Identities=15% Similarity=0.132 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHhCCCCEEEec-ccC-----CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhh
Q psy15811 408 AWHRPNVEALVRAGVDYLALE-TIP-----AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 479 (581)
Q Consensus 408 ~~~~~~~~~l~~~gvD~i~~E-T~p-----~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~ 479 (581)
+.++..++.+.+.|||.|++= |.. +..|-+.+++.+.+. ..+||++.. .+.+..++++..+..
T Consensus 32 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~ai~la~~a 102 (318)
T 3qfe_A 32 ASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGV---------GAHSTRQVLEHINDA 102 (318)
T ss_dssp HHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEEC---------CCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCCCHHHHHHHHHHH
Confidence 344566777888999987652 322 267777777777653 358999876 235667777766554
Q ss_pred CCCCceEEEECCC----C---CccchHHHHHHHhhCCCCeEEEeeCCC
Q psy15811 480 NPDQIQAIGVNCV----R---PSHVSTLVRCIKQSHPTVQTIVYPNKG 520 (581)
Q Consensus 480 ~~~~~~~iGiNC~----~---p~~~~~~l~~l~~~~~~~pl~~ypNag 520 (581)
...+++++.+-.- . .+.+....+.+.... ++|+++|-+-+
T Consensus 103 ~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~-~lPiilYn~P~ 149 (318)
T 3qfe_A 103 SVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQS-PLPVVIYNFPG 149 (318)
T ss_dssp HHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHC-SSCEEEEECCC
T ss_pred HHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhC-CCCEEEEeCCc
Confidence 5567787777541 1 123444556677766 69999998754
No 85
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=83.46 E-value=11 Score=36.78 Aligned_cols=86 Identities=17% Similarity=0.201 Sum_probs=56.1
Q ss_pred HHHHHHHHhCCCCEEEe-----cccCCHHHHHHHHHHHHhcC-CCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCc
Q psy15811 411 RPNVEALVRAGVDYLAL-----ETIPAEKEALALVKLLREFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 484 (581)
Q Consensus 411 ~~~~~~l~~~gvD~i~~-----ET~p~~~Ea~a~~~~~~~~~-~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~ 484 (581)
.+.++.+.++|+|.+-+ -.+|++.....+++.+|+.+ ++|+-+++.+.+.. +.++.+. ..++
T Consensus 43 ~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p~---------~~i~~~~---~aGA 110 (246)
T 3inp_A 43 GDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVD---------ALIESFA---KAGA 110 (246)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSCH---------HHHHHHH---HHTC
T ss_pred HHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCHH---------HHHHHHH---HcCC
Confidence 36778888899998766 34578777788889999766 89999999875431 2223331 1244
Q ss_pred eEEEECCCCCccchHHHHHHHhhC
Q psy15811 485 QAIGVNCVRPSHVSTLVRCIKQSH 508 (581)
Q Consensus 485 ~~iGiNC~~p~~~~~~l~~l~~~~ 508 (581)
+.|-+-+-...++...++.++..+
T Consensus 111 d~itvH~Ea~~~~~~~i~~ir~~G 134 (246)
T 3inp_A 111 TSIVFHPEASEHIDRSLQLIKSFG 134 (246)
T ss_dssp SEEEECGGGCSCHHHHHHHHHTTT
T ss_pred CEEEEccccchhHHHHHHHHHHcC
Confidence 555555533345666677776654
No 86
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=83.32 E-value=6.5 Score=40.31 Aligned_cols=105 Identities=12% Similarity=0.090 Sum_probs=66.9
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cccC-CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHH
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAV 473 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~-----ET~p-~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~ 473 (581)
.++.+. ++..++.+++.|||.|++ |... +.+|-+.+++. .....+||++.. .+.+..+++
T Consensus 43 ~ID~~~----l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~-~~~grvpViaGv---------g~~st~eai 108 (344)
T 2hmc_A 43 TPDFDA----LVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER-LVKAGIPVIVGT---------GAVNTASAV 108 (344)
T ss_dssp SBCHHH----HHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH-HHHTTCCEEEEC---------CCSSHHHHH
T ss_pred CcCHHH----HHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH-HhCCCCcEEEec---------CCCCHHHHH
Confidence 355544 456677777899999875 3221 25676777776 322468999877 234667777
Q ss_pred HHHHhhCCCCceEEEECC-C--C-C--ccchHHHHHHHh-hCCCCeEEEeeCC
Q psy15811 474 TSCLLANPDQIQAIGVNC-V--R-P--SHVSTLVRCIKQ-SHPTVQTIVYPNK 519 (581)
Q Consensus 474 ~~l~~~~~~~~~~iGiNC-~--~-p--~~~~~~l~~l~~-~~~~~pl~~ypNa 519 (581)
+..+.....+++++.+-. . . | +.+....+.+.. .. ++|+++|-+-
T Consensus 109 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~-~lPiilYn~P 160 (344)
T 2hmc_A 109 AHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAP-EIPAVIYNSP 160 (344)
T ss_dssp HHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHST-TSCEEEEEBG
T ss_pred HHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCC-CCcEEEEecC
Confidence 766544456788877766 1 2 2 234455567777 55 6999999764
No 87
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=83.27 E-value=5.2 Score=40.08 Aligned_cols=118 Identities=13% Similarity=0.083 Sum_probs=70.0
Q ss_pred HHHHHhCCCCEEEecccCCHH-------------------------HHHHHHHHHHh---cCCCeEEEEEEEcCCCcCCC
Q psy15811 414 VEALVRAGVDYLALETIPAEK-------------------------EALALVKLLRE---FPGQKAWLSFSCKDDTHTSH 465 (581)
Q Consensus 414 ~~~l~~~gvD~i~~ET~p~~~-------------------------Ea~a~~~~~~~---~~~~pv~iSft~~~~~~l~~ 465 (581)
++.+.+.|+.++..+|++... .....++.+++ .++.|+++++.
T Consensus 31 ~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~~p~~~~i~--------- 101 (314)
T 2e6f_A 31 LRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLKYASDLHDYSKKPLFLSIS--------- 101 (314)
T ss_dssp HHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHTCCTTTCCEEEEEC---------
T ss_pred HHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHHHHHHHhhcCCCcEEEEeC---------
Confidence 445677899999887754321 01222233332 24789999883
Q ss_pred CCcHHHHHHHHHhhCCCCce---EEEECCCCCc------------cchHHHHHHHhhCCCCeEEEeeCCCCCcccccccc
Q psy15811 466 GELISSAVTSCLLANPDQIQ---AIGVNCVRPS------------HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW 530 (581)
Q Consensus 466 G~~~~~~~~~l~~~~~~~~~---~iGiNC~~p~------------~~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~ 530 (581)
|.++++..+.+......+++ +|-+|+.+|. .+.++++.++... ++|+++.-..+ |
T Consensus 102 g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~-~~Pv~vK~~~~---------~ 171 (314)
T 2e6f_A 102 GLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAY-GLPFGVKMPPY---------F 171 (314)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHH-CSCEEEEECCC---------C
T ss_pred CCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhc-CCCEEEEECCC---------C
Confidence 44555444443322333567 7888886443 3455677777665 58988874322 1
Q ss_pred cCCcCHHHHHHHHHHHHHcC-CcEE
Q psy15811 531 LDTEDEYSILHYVPQWLEEG-VNII 554 (581)
Q Consensus 531 ~~~~~~~~~~~~~~~w~~~G-~~ii 554 (581)
+.+++.+.++...+.| +..|
T Consensus 172 ----~~~~~~~~a~~~~~aG~~d~i 192 (314)
T 2e6f_A 172 ----DIAHFDTAAAVLNEFPLVKFV 192 (314)
T ss_dssp ----CHHHHHHHHHHHHTCTTEEEE
T ss_pred ----CHHHHHHHHHHHHhcCCceEE
Confidence 2456777777788888 7654
No 88
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=83.20 E-value=7.6 Score=41.51 Aligned_cols=101 Identities=14% Similarity=0.188 Sum_probs=70.7
Q ss_pred HHHHHHHHHCCCcEEE-EEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEe
Q psy15811 155 RPNVEALVRAGVDYLA-LETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGV 233 (581)
Q Consensus 155 ~~q~~~l~~~gvD~l~-~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGv 233 (581)
+..++...++|+|.|- |-..+++..++.+++++++. +..+.+++++..+-+ .+++.++..+..+...|++.|.+
T Consensus 103 ~~~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~-G~~v~~~i~~~~~~~----~~~e~~~~~a~~l~~~Gad~I~l 177 (464)
T 2nx9_A 103 DTFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKM-GAHAQGTLCYTTSPV----HNLQTWVDVAQQLAELGVDSIAL 177 (464)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHT-TCEEEEEEECCCCTT----CCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHC-CCEEEEEEEeeeCCC----CCHHHHHHHHHHHHHCCCCEEEE
Confidence 3445667789999874 44667888899999999986 777776776553322 25554444433333578888877
Q ss_pred CC----CChhhHHHHHHHHHhhCCCCceEEec
Q psy15811 234 NC----VRPSHVSTLVRCIKQSHPTVQTIVYP 261 (581)
Q Consensus 234 NC----~~p~~~~~~l~~l~~~~~~~p~~~~p 261 (581)
-= ..|..+.++++.+++. .++||.+..
T Consensus 178 ~DT~G~~~P~~v~~lv~~l~~~-~~~~i~~H~ 208 (464)
T 2nx9_A 178 KDMAGILTPYAAEELVSTLKKQ-VDVELHLHC 208 (464)
T ss_dssp EETTSCCCHHHHHHHHHHHHHH-CCSCEEEEE
T ss_pred cCCCCCcCHHHHHHHHHHHHHh-cCCeEEEEE
Confidence 42 3599999999999986 578887664
No 89
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=82.93 E-value=6.1 Score=37.92 Aligned_cols=49 Identities=14% Similarity=0.277 Sum_probs=36.0
Q ss_pred HHHHHHHHhCCCCEEEec-----ccCCHHHHHHHHHHHHhcCCCeEEEEEEEcC
Q psy15811 411 RPNVEALVRAGVDYLALE-----TIPAEKEALALVKLLREFPGQKAWLSFSCKD 459 (581)
Q Consensus 411 ~~~~~~l~~~gvD~i~~E-----T~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~ 459 (581)
.+.++.+.++|+|+|=+- .+|++......++.+|+.+++|+-++|-+.+
T Consensus 20 ~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv~d 73 (230)
T 1tqj_A 20 GEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMIVE 73 (230)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEESSS
T ss_pred HHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhcCCcEEEEEEccC
Confidence 467888888999986332 2356555557888888877889999998754
No 90
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=82.46 E-value=6.2 Score=38.58 Aligned_cols=94 Identities=12% Similarity=0.029 Sum_probs=56.2
Q ss_pred HHHHHHHCCCcEE---EEEccCCHHH----HHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHH---HHHHHHHhhCCC
Q psy15811 157 NVEALVRAGVDYL---ALETIPAEKE----ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELIS---SAVTSCLLANPD 226 (581)
Q Consensus 157 q~~~l~~~gvD~l---~~ET~~~~~E----~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~---~~~~~~~~~~~~ 226 (581)
+++..++.|+|.| +..-..+..+ ++.+++++++. ++|+++-.. .++.++..|.+.. +++..+. ..
T Consensus 104 ~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~-g~~viv~~~-~~G~~l~~~~~~~~~~~~a~~a~---~~ 178 (273)
T 2qjg_A 104 TVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYW-GMPLIAMMY-PRGKHIQNERDPELVAHAARLGA---EL 178 (273)
T ss_dssp CHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHH-TCCEEEEEE-ECSTTCSCTTCHHHHHHHHHHHH---HT
T ss_pred HHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHc-CCCEEEEeC-CCCcccCCCCCHhHHHHHHHHHH---Hc
Confidence 5666778999999 6666555543 55566666665 789887532 2333444455553 3334443 47
Q ss_pred CceEEEeCCC-ChhhHHHHHHHHHhhCCCCceEEe
Q psy15811 227 QIQAIGVNCV-RPSHVSTLVRCIKQSHPTVQTIVY 260 (581)
Q Consensus 227 ~~~~vGvNC~-~p~~~~~~l~~l~~~~~~~p~~~~ 260 (581)
|++.|+++=. ++ +.++.+... .++|+++.
T Consensus 179 Gad~i~~~~~~~~----~~l~~i~~~-~~ipvva~ 208 (273)
T 2qjg_A 179 GADIVKTSYTGDI----DSFRDVVKG-CPAPVVVA 208 (273)
T ss_dssp TCSEEEECCCSSH----HHHHHHHHH-CSSCEEEE
T ss_pred CCCEEEECCCCCH----HHHHHHHHh-CCCCEEEE
Confidence 8999999843 44 344555543 45666553
No 91
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=82.12 E-value=1.4 Score=44.70 Aligned_cols=45 Identities=11% Similarity=-0.071 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEE
Q psy15811 152 AWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFS 200 (581)
Q Consensus 152 ~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft 200 (581)
+.-.+++.++.++|+|.|++|.+++.+|++.+.+.+ ++|+++.++
T Consensus 189 ~~ai~Ra~Ay~eAGAd~i~~e~~~~~e~~~~i~~~l----~~P~lan~~ 233 (318)
T 1zlp_A 189 EEGIRRANLYKEAGADATFVEAPANVDELKEVSAKT----KGLRIANMI 233 (318)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHS----CSEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhc----CCCEEEEec
Confidence 455678899999999999999999999998887766 479877543
No 92
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=82.02 E-value=1.2 Score=44.78 Aligned_cols=46 Identities=15% Similarity=0.137 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEE
Q psy15811 151 IAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFS 200 (581)
Q Consensus 151 ~~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft 200 (581)
.+.--+|++++.++|+|+|++|..++.+|++.+.+++. .|+++.++
T Consensus 170 ldeai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~~~----~Pl~~n~~ 215 (298)
T 3eoo_A 170 IDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEAVK----VPILANLT 215 (298)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHHC----SCBEEECC
T ss_pred HHHHHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHHcC----CCeEEEec
Confidence 34456789999999999999999999999999888873 78887653
No 93
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=81.83 E-value=14 Score=36.17 Aligned_cols=92 Identities=16% Similarity=0.224 Sum_probs=57.8
Q ss_pred HHHHHHHHHhCCCCEEEecccCC----------------------HHHHHHHHHHHHhc-CCCeEEEEEEEcCCCcCCCC
Q psy15811 410 HRPNVEALVRAGVDYLALETIPA----------------------EKEALALVKLLREF-PGQKAWLSFSCKDDTHTSHG 466 (581)
Q Consensus 410 ~~~~~~~l~~~gvD~i~~ET~p~----------------------~~Ea~a~~~~~~~~-~~~pv~iSft~~~~~~l~~G 466 (581)
..+.++.|.++|+|.|-+-.-.+ +.....+++.+|+. +++|+.+ ++.. +.....|
T Consensus 33 ~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~l-m~y~-n~v~~~g 110 (268)
T 1qop_A 33 SLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGL-LMYA-NLVFNNG 110 (268)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEE-EECH-HHHHTTC
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEE-EEcc-cHHHHhh
Confidence 35778889999999998865221 22233567777765 6899665 3211 1112222
Q ss_pred CcHHHHHHHHHhhCCCCceEEEECCCCCccchHHHHHHHhhC
Q psy15811 467 ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSH 508 (581)
Q Consensus 467 ~~~~~~~~~l~~~~~~~~~~iGiNC~~p~~~~~~l~~l~~~~ 508 (581)
.+..++.+. ..++++|-+....++++..+++.++..+
T Consensus 111 --~~~~~~~~~---~aGadgii~~d~~~e~~~~~~~~~~~~g 147 (268)
T 1qop_A 111 --IDAFYARCE---QVGVDSVLVADVPVEESAPFRQAALRHN 147 (268)
T ss_dssp --HHHHHHHHH---HHTCCEEEETTCCGGGCHHHHHHHHHTT
T ss_pred --HHHHHHHHH---HcCCCEEEEcCCCHHHHHHHHHHHHHcC
Confidence 245555552 2366777888877788888888888764
No 94
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=81.30 E-value=17 Score=36.48 Aligned_cols=96 Identities=11% Similarity=0.051 Sum_probs=57.4
Q ss_pred HHHHHHCCCcEEEEEcc--CCH------HHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCH-HHHHHHHHhhCCCCc
Q psy15811 158 VEALVRAGVDYLALETI--PAE------KEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELI-SSAVTSCLLANPDQI 228 (581)
Q Consensus 158 ~~~l~~~gvD~l~~ET~--~~~------~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~-~~~~~~~~~~~~~~~ 228 (581)
++..++.|+|++-+=.+ ++. .++..+.+.+++. ++|+++-+-.. +....+-.+. .....++......|+
T Consensus 114 ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~-G~p~lv~~~~~-g~~v~~~~~~~~~v~~aa~~a~~lGa 191 (304)
T 1to3_A 114 AQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSN-GLLSIIEPVVR-PPRCGDKFDREQAIIDAAKELGDSGA 191 (304)
T ss_dssp HHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTT-TCEEEEEEEEC-CCSSCSCCCHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHc-CCcEEEEEECC-CCccccCCChhHHHHHHHHHHHHcCC
Confidence 34556789999864333 222 5666666777665 89988764332 2223222222 222222333446899
Q ss_pred eEEEeCCC-----ChhhHHHHHHHHHhhCCCCc
Q psy15811 229 QAIGVNCV-----RPSHVSTLVRCIKQSHPTVQ 256 (581)
Q Consensus 229 ~~vGvNC~-----~p~~~~~~l~~l~~~~~~~p 256 (581)
|.+++.-. +++.+.++++....+ ..+|
T Consensus 192 D~iKv~~~~~~~g~~~~~~~vv~~~~~~-~~~P 223 (304)
T 1to3_A 192 DLYKVEMPLYGKGARSDLLTASQRLNGH-INMP 223 (304)
T ss_dssp SEEEECCGGGGCSCHHHHHHHHHHHHHT-CCSC
T ss_pred CEEEeCCCcCCCCCHHHHHHHHHhcccc-CCCC
Confidence 99999884 578888888876664 5566
No 95
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=81.21 E-value=4.4 Score=40.55 Aligned_cols=95 Identities=13% Similarity=0.002 Sum_probs=57.9
Q ss_pred HHHHHHCCCcEEEEEccCCH----------------------------HHHHHHHHHHH-hc-CCCcEEEEEEEcCCCcC
Q psy15811 158 VEALVRAGVDYLALETIPAE----------------------------KEALALVKLLR-EF-PGQKAWLSFSCKDDTHT 207 (581)
Q Consensus 158 ~~~l~~~gvD~l~~ET~~~~----------------------------~E~~aa~~a~~-~~-~~~pv~isft~~~~g~l 207 (581)
++.+.+.|+.++..+|++.. +....-++..+ .. ++.|+++|+.
T Consensus 29 ~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~~~~p~~~~i~------- 101 (311)
T 1jub_A 29 LEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVLKNQKENAQEGPIFFSIA------- 101 (311)
T ss_dssp HHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHHHHHTCSSSCCEEEEC-------
T ss_pred HHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCccHHHHHHHHHHHHHhcCCCCCEEEEcC-------
Confidence 35567889999988887632 22222222222 22 2789998873
Q ss_pred CCCCCHHHHHHHHHhhCCCCce-EEEeCCC------------ChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 208 SHGELISSAVTSCLLANPDQIQ-AIGVNCV------------RPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 208 ~~G~~~~~~~~~~~~~~~~~~~-~vGvNC~------------~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
|.++++....+......+++ +|=+|++ .|+.+.++++.+++. .++|++++-.
T Consensus 102 --g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~-~~~Pv~vKi~ 166 (311)
T 1jub_A 102 --GMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTF-FTKPLGVKLP 166 (311)
T ss_dssp --CSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEEC
T ss_pred --CCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHh-cCCCEEEEEC
Confidence 44555544443322246778 8888885 355667788888775 5788887643
No 96
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=81.15 E-value=12 Score=34.85 Aligned_cols=90 Identities=10% Similarity=0.096 Sum_probs=56.6
Q ss_pred HHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC
Q psy15811 157 NVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 236 (581)
Q Consensus 157 q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~ 236 (581)
.++.+.++|+|.+++=..+..+.+..+++.+++. ++++++.+. .-.++.+.+..+.+ .+++.|++|-.
T Consensus 69 ~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~-g~~~~v~~~--------~~~t~~~~~~~~~~---~g~d~i~v~~g 136 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEA-GKQVVVDMI--------CVDDLPARVRLLEE---AGADMLAVHTG 136 (211)
T ss_dssp HHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHH-TCEEEEECT--------TCSSHHHHHHHHHH---HTCCEEEEECC
T ss_pred HHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHc-CCeEEEEec--------CCCCHHHHHHHHHH---cCCCEEEEcCC
Confidence 3778889999999998887766778888888886 777776321 11234444455443 56788888732
Q ss_pred --C---hhhHHHHHHHHHhhCCCCceE
Q psy15811 237 --R---PSHVSTLVRCIKQSHPTVQTI 258 (581)
Q Consensus 237 --~---p~~~~~~l~~l~~~~~~~p~~ 258 (581)
+ +....+.++.+++...+.|+.
T Consensus 137 ~~g~~~~~~~~~~i~~l~~~~~~~~i~ 163 (211)
T 3f4w_A 137 TDQQAAGRKPIDDLITMLKVRRKARIA 163 (211)
T ss_dssp HHHHHTTCCSHHHHHHHHHHCSSCEEE
T ss_pred CcccccCCCCHHHHHHHHHHcCCCcEE
Confidence 1 001245667777642244443
No 97
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=80.95 E-value=1.5 Score=44.19 Aligned_cols=45 Identities=16% Similarity=0.084 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEE
Q psy15811 152 AWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFS 200 (581)
Q Consensus 152 ~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft 200 (581)
+.-.+++.++.++|+|.|++|.+++.++++.+.+.+ ++|+++.++
T Consensus 167 ~~ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~----~iP~~~N~~ 211 (295)
T 1xg4_A 167 DAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAV----QVPILANIT 211 (295)
T ss_dssp HHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHH----CSCBEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHc----CCCEEEEec
Confidence 445678899999999999999999999999888887 378877554
No 98
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=80.56 E-value=9.1 Score=38.22 Aligned_cols=120 Identities=11% Similarity=0.011 Sum_probs=70.4
Q ss_pred HHHHHHHhCCCCEEEecccCCHH-H------------------------HHHHHHHHH---hcC--CCeEEEEEEEcCCC
Q psy15811 412 PNVEALVRAGVDYLALETIPAEK-E------------------------ALALVKLLR---EFP--GQKAWLSFSCKDDT 461 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~p~~~-E------------------------a~a~~~~~~---~~~--~~pv~iSft~~~~~ 461 (581)
+.++.+.+.|+.++..+|++... . ....++.++ +.. +.|+++++.
T Consensus 27 ~~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~~~~p~~~~i~----- 101 (311)
T 1jub_A 27 EDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVLKNQKENAQEGPIFFSIA----- 101 (311)
T ss_dssp HHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHHHHHTCSSSCCEEEEC-----
T ss_pred HHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCccHHHHHHHHHHHHHhcCCCCCEEEEcC-----
Confidence 34455677899999888876421 0 122222222 123 789999883
Q ss_pred cCCCCCcHHHHHHHHHhhCCCCce-EEEECCCCC------------ccchHHHHHHHhhCCCCeEEEeeCCCCCcccccc
Q psy15811 462 HTSHGELISSAVTSCLLANPDQIQ-AIGVNCVRP------------SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHM 528 (581)
Q Consensus 462 ~l~~G~~~~~~~~~l~~~~~~~~~-~iGiNC~~p------------~~~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~ 528 (581)
|.++++..+.+......+++ +|-+|+.+| +.+.++++.++... ++|+++.-..+
T Consensus 102 ----g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~-~~Pv~vKi~~~-------- 168 (311)
T 1jub_A 102 ----GMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFF-TKPLGVKLPPY-------- 168 (311)
T ss_dssp ----CSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTC-CSCEEEEECCC--------
T ss_pred ----CCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhc-CCCEEEEECCC--------
Confidence 44555554444333344667 777777533 33456677777665 58988864422
Q ss_pred cccCCcCHHHHHHHHHHHHHcCCcEE
Q psy15811 529 KWLDTEDEYSILHYVPQWLEEGVNII 554 (581)
Q Consensus 529 ~~~~~~~~~~~~~~~~~w~~~G~~ii 554 (581)
| +.+++.+.++...+.|+..|
T Consensus 169 -~----~~~~~~~~a~~~~~~G~d~i 189 (311)
T 1jub_A 169 -F----DLVHFDIMAEILNQFPLTYV 189 (311)
T ss_dssp -C----SHHHHHHHHHHHTTSCCCEE
T ss_pred -C----CHHHHHHHHHHHHHcCCcEE
Confidence 1 24466777777778887653
No 99
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=80.50 E-value=21 Score=37.58 Aligned_cols=137 Identities=13% Similarity=0.112 Sum_probs=87.9
Q ss_pred HHHHHHHHHhCCCCEEEecccC---------------CHHHHHHHHHHHHh---cCCCeEEEEEEEcCCCc---------
Q psy15811 410 HRPNVEALVRAGVDYLALETIP---------------AEKEALALVKLLRE---FPGQKAWLSFSCKDDTH--------- 462 (581)
Q Consensus 410 ~~~~~~~l~~~gvD~i~~ET~p---------------~~~Ea~a~~~~~~~---~~~~pv~iSft~~~~~~--------- 462 (581)
-.+.++.|.++||-.|-||+.- ...|...=+.+++. ..+.+++|---.+...-
T Consensus 165 v~~tvk~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI~AAr~A~~~~g~d~vIiARTDa~~a~li~s~~d~ 244 (429)
T 1f8m_A 165 VYELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIARTDAEAATLITSDVDE 244 (429)
T ss_dssp HHHHHHHHHHTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTTCCEESCCCST
T ss_pred HHHHHHHHHHcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHHHHHHHHHHhcCCCEEEEEEechhhhccccccccc
Confidence 3467888999999999999864 14555544444442 14677666665443210
Q ss_pred ----------CCC-----CCcHHHHHHHHHhhCCCCceEEEEC-C-CCCccchHHHHHHHhhCCCCeEEEeeCCCCCccc
Q psy15811 463 ----------TSH-----GELISSAVTSCLLANPDQIQAIGVN-C-VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDS 525 (581)
Q Consensus 463 ----------l~~-----G~~~~~~~~~l~~~~~~~~~~iGiN-C-~~p~~~~~~l~~l~~~~~~~pl~~ypNag~~~~~ 525 (581)
.+. ...++++++....... ++++|=+- + .+++.+..+.+.++... +..+++|+.+. .+
T Consensus 245 ~d~~fl~g~~~~eg~y~~~~gld~AI~Ra~AYa~-gAD~if~e~~~~~~eei~~f~~~v~~~~-P~~~La~n~sP-sf-- 319 (429)
T 1f8m_A 245 RDQPFITGERTREGFYRTKNGIEPCIARAKAYAP-FADLIWMETGTPDLEAARQFSEAVKAEY-PDQMLAYNCSP-SF-- 319 (429)
T ss_dssp TTGGGEEEEECTTSCEEECCSHHHHHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHTTC-TTCEEEEECCT-TS--
T ss_pred cccccccCCCCcccccccccCHHHHHHHHHHHHh-cCCEEEeCCCCCCHHHHHHHHHHhcccC-CCceeecCCCC-CC--
Confidence 111 2468999998866655 78877664 3 35667777777776433 23356787642 11
Q ss_pred ccccccCCcCHHHHHHHHHHHHHcCCcEE
Q psy15811 526 VHMKWLDTEDEYSILHYVPQWLEEGVNII 554 (581)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~w~~~G~~ii 554 (581)
+ |..+.+++.+..|..+..+.|++++
T Consensus 320 ~---w~~~~~~~~~~~f~~eL~~lG~~~v 345 (429)
T 1f8m_A 320 N---WKKHLDDATIAKFQKELAAMGFKFQ 345 (429)
T ss_dssp C---HHHHCCHHHHHHHHHHHHHHTEEEE
T ss_pred C---cccccchhhHhHHHHHHHHcCCeEE
Confidence 2 5445668889999999999998654
No 100
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=80.34 E-value=11 Score=38.72 Aligned_cols=117 Identities=13% Similarity=0.036 Sum_probs=71.0
Q ss_pred eEEeccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cccC-CHHHHHHHHHHHHhc--
Q psy15811 375 QTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL-----ETIP-AEKEALALVKLLREF-- 446 (581)
Q Consensus 375 ~VagsiGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l~~~gvD~i~~-----ET~p-~~~Ea~a~~~~~~~~-- 446 (581)
.+...+-|+.. + +.++.+. ++..++.+.+.|||.|++ |... +.+|-+.+++.+.+.
T Consensus 63 i~~alvTPF~~---d---------g~ID~~a----l~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~ 126 (360)
T 4dpp_A 63 VITAIKTPYLP---D---------GRFDLEA----YDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFG 126 (360)
T ss_dssp EEEECCCCBCT---T---------SSBCHHH----HHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT
T ss_pred eEEEEeCcCCC---C---------CCcCHHH----HHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhC
Confidence 55667778742 1 2355544 456677777899999877 4322 266767777666642
Q ss_pred CCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECC--C-CC--ccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC--V-RP--SHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 447 ~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC--~-~p--~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
..+||++.. .+.+..++++..+.....+++++.+-. . .| +.+....+.+.. ..|+++|-+-
T Consensus 127 grvpViaGv---------g~~st~eai~la~~A~~~Gadavlvv~PyY~k~sq~gl~~hf~~IA~---a~PiilYNiP 192 (360)
T 4dpp_A 127 GSIKVIGNT---------GSNSTREAIHATEQGFAVGMHAALHINPYYGKTSIEGLIAHFQSVLH---MGPTIIYNVP 192 (360)
T ss_dssp TTSEEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHTTGG---GSCEEEEECH
T ss_pred CCCeEEEec---------CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHH---hCCEEEEeCC
Confidence 357999876 234677777766544556778776655 1 12 223333344443 3699999753
No 101
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=80.03 E-value=8.1 Score=38.96 Aligned_cols=101 Identities=13% Similarity=0.037 Sum_probs=66.2
Q ss_pred HHHHHHHHHHhCCCCEEEe-cccC-----CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhC
Q psy15811 409 WHRPNVEALVRAGVDYLAL-ETIP-----AEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN 480 (581)
Q Consensus 409 ~~~~~~~~l~~~gvD~i~~-ET~p-----~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~ 480 (581)
.++..++.+.+.|||.|++ -|.. +..|-+.+++.+.+. ..+||+++. .+.+..++++..+...
T Consensus 29 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGv---------g~~~t~~ai~la~~A~ 99 (311)
T 3h5d_A 29 AIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGV---------GTNDTRDSIEFVKEVA 99 (311)
T ss_dssp HHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEEC---------CCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCcCHHHHHHHHHHHH
Confidence 3556777778899997654 3433 277878888877753 357999876 2345677777665444
Q ss_pred CCCc-eEEEECC---CCC--ccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 481 PDQI-QAIGVNC---VRP--SHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 481 ~~~~-~~iGiNC---~~p--~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
..+. +++.+-. ..| +.+....+.+.... ++|+++|-+-
T Consensus 100 ~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilYn~P 143 (311)
T 3h5d_A 100 EFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADAS-DLPIIIYNIP 143 (311)
T ss_dssp HSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSC-SSCEEEEECH
T ss_pred hcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEEecc
Confidence 4454 7766655 222 34555667777766 7999999763
No 102
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=79.73 E-value=16 Score=36.15 Aligned_cols=102 Identities=18% Similarity=0.102 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHCC-CcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEE
Q psy15811 153 WHRPNVEALVRAG-VDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 231 (581)
Q Consensus 153 ~~~~q~~~l~~~g-vD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~v 231 (581)
.|.+.++..++.| +|+|=+|-..+-+-.+.+++.+++. +.+|++|+.--+ .+++-+.+.+.+.++ ...|+|.+
T Consensus 120 ~~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~-~~kvI~S~Hdf~--~tP~~~el~~~~~~~---~~~GaDIv 193 (276)
T 3o1n_A 120 QYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQH-NVAVIMSNHDFH--KTPAAEEIVQRLRKM---QELGADIP 193 (276)
T ss_dssp HHHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHT-TCEEEEEEEESS--CCCCHHHHHHHHHHH---HHTTCSEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhC-CCEEEEEeecCC--CCcCHHHHHHHHHHH---HHcCCCEE
Confidence 5666666777778 9999999877766666677766664 789999986332 233323333333333 35788888
Q ss_pred EeCCC--ChhhHHHHHHHHHh---hCCCCceEEe
Q psy15811 232 GVNCV--RPSHVSTLVRCIKQ---SHPTVQTIVY 260 (581)
Q Consensus 232 GvNC~--~p~~~~~~l~~l~~---~~~~~p~~~~ 260 (581)
=+-+. .+++...+++.... ...+.|++.+
T Consensus 194 Kia~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~ 227 (276)
T 3o1n_A 194 KIAVMPQTKADVLTLLTATVEMQERYADRPIITM 227 (276)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHTCCSCCEEE
T ss_pred EEEecCCChHHHHHHHHHHHHHHhcCCCCCEEEE
Confidence 77775 57777777665433 1256788877
No 103
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=79.67 E-value=38 Score=34.34 Aligned_cols=115 Identities=16% Similarity=0.188 Sum_probs=67.7
Q ss_pred CCCCCHHH---HHHHHHHHHHHHHHCCCcEEEEEcc----------C-----------CHH----HHHHHHHHHHhcCCC
Q psy15811 142 VDSMTEAD---LIAWHRPNVEALVRAGVDYLALETI----------P-----------AEK----EALALVKLLREFPGQ 193 (581)
Q Consensus 142 ~~~~~~~~---~~~~~~~q~~~l~~~gvD~l~~ET~----------~-----------~~~----E~~aa~~a~~~~~~~ 193 (581)
.+++|.+| +.+.|.+-++...++|.|.|=+=-- | +++ =+..+++++|+..+.
T Consensus 131 p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~ 210 (340)
T 3gr7_A 131 PKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDG 210 (340)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCS
T ss_pred CccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCC
Confidence 35677655 5677888888888899998844311 1 111 145566777754488
Q ss_pred cEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC---------ChhhHHHHHHHHHhhCCCCceEE
Q psy15811 194 KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV---------RPSHVSTLVRCIKQSHPTVQTIV 259 (581)
Q Consensus 194 pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~---------~p~~~~~~l~~l~~~~~~~p~~~ 259 (581)
||.+-++..+ ....|.++++.+..+......|++.|=+-.. +|....++++.+++. .++|++.
T Consensus 211 pv~vRls~~~--~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~-~~iPVi~ 282 (340)
T 3gr7_A 211 PLFVRISASD--YHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRRE-ADIPTGA 282 (340)
T ss_dssp CEEEEEESCC--CSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-TTCCEEE
T ss_pred ceEEEecccc--ccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHH-cCCcEEe
Confidence 9998887653 2233545444443332222477888777542 233345667777775 5666554
No 104
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=79.65 E-value=8.8 Score=39.33 Aligned_cols=123 Identities=15% Similarity=0.143 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEE
Q psy15811 152 AWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 231 (581)
Q Consensus 152 ~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~v 231 (581)
+.-..|+..|.++|+|++=+ |+|+.++ ..++..+++..++|+++-+.|+ ..-++..+ ..|++.+
T Consensus 46 ~atv~Qi~~l~~aG~diVRv-avp~~~~-a~al~~I~~~~~vPlvaDiHf~----------~~lal~a~----e~G~dkl 109 (366)
T 3noy_A 46 EATLNQIKRLYEAGCEIVRV-AVPHKED-VEALEEIVKKSPMPVIADIHFA----------PSYAFLSM----EKGVHGI 109 (366)
T ss_dssp HHHHHHHHHHHHTTCCEEEE-ECCSHHH-HHHHHHHHHHCSSCEEEECCSC----------HHHHHHHH----HTTCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEe-CCCChHH-HHHHHHHHhcCCCCEEEeCCCC----------HHHHHHHH----HhCCCeE
Confidence 34567999999999999876 8899655 4667777665689999876665 23344433 2678899
Q ss_pred EeCCC---ChhhHHHHHHHHHhhCCCCceEEecCCCccccCCCchhhhccccCcccCCCCcccccccCCChHHHHHHHHH
Q psy15811 232 GVNCV---RPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRD 308 (581)
Q Consensus 232 GvNC~---~p~~~~~~l~~l~~~~~~~p~~~~pnag~~~~dG~~gt~L~~~~g~~~~g~~lws~~~~~~~Pe~v~~vh~~ 308 (581)
=+|=. ..+.+.++++..+.+ ++|+-+=-|.|- +.+.|..++| + .+||.+.+-..+
T Consensus 110 RINPGNig~~~~~~~vv~~ak~~--~~piRIGvN~GS------L~~~ll~~yg-----~---------~~~eamVeSAl~ 167 (366)
T 3noy_A 110 RINPGNIGKEEIVREIVEEAKRR--GVAVRIGVNSGS------LEKDLLEKYG-----Y---------PSAEALAESALR 167 (366)
T ss_dssp EECHHHHSCHHHHHHHHHHHHHH--TCEEEEEEEGGG------CCHHHHHHHS-----S---------CCHHHHHHHHHH
T ss_pred EECCcccCchhHHHHHHHHHHHc--CCCEEEecCCcC------CCHHHHHhcC-----C---------CCHHHHHHHHHH
Confidence 99975 366778888888874 778877777762 2334444322 2 378887666566
Q ss_pred HHHH
Q psy15811 309 FIRG 312 (581)
Q Consensus 309 yl~a 312 (581)
+++.
T Consensus 168 ~~~~ 171 (366)
T 3noy_A 168 WSEK 171 (366)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 105
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=79.64 E-value=34 Score=34.66 Aligned_cols=85 Identities=19% Similarity=0.248 Sum_probs=51.7
Q ss_pred HHHHHHHCCCcEEEEE-ccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCC--CHHHHHHHHHhhCCCCceEEEe
Q psy15811 157 NVEALVRAGVDYLALE-TIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGE--LISSAVTSCLLANPDQIQAIGV 233 (581)
Q Consensus 157 q~~~l~~~gvD~l~~E-T~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~--~~~~~~~~~~~~~~~~~~~vGv 233 (581)
.++.+.+.|+|+|-+. ++.++.+++. .+ +-.+.++--+++...+..|+ .+.+.+..+.+ .+...++.
T Consensus 254 ~l~~~~~~g~d~i~~d~~~~~~~~~k~---~~----g~~~~l~Gnldp~~~l~~g~~e~i~~~v~~~l~---~~g~I~~~ 323 (348)
T 4ay7_A 254 ILSDMADCGFEGLSVEEKIGSAKKGKE---VI----GTRARLVGNVSSPFTLLPGPVDKIKAEAKEALE---GGIDVLAP 323 (348)
T ss_dssp HHHHHHTSCCSEEECCGGGCCHHHHHH---HH----TTSSEEEEEECCCCCCTTCCHHHHHHHHHHHHH---TTCSEEEE
T ss_pred HHHHHHHhccccccccchhhHHHHHHH---Hh----CCCEEEEcCCCChHhhcCCCHHHHHHHHHHHHh---CCCCEEeC
Confidence 3566788999999776 5555655432 22 23344555666555566663 24444445443 45578888
Q ss_pred CCC-----ChhhHHHHHHHHHhh
Q psy15811 234 NCV-----RPSHVSTLVRCIKQS 251 (581)
Q Consensus 234 NC~-----~p~~~~~~l~~l~~~ 251 (581)
.|+ -|+++..+++.++.+
T Consensus 324 Ghgi~p~tp~env~a~v~av~ey 346 (348)
T 4ay7_A 324 GCGIAPMTPLENVKALVAARDEF 346 (348)
T ss_dssp SSSCCTTCCHHHHHHHHHHHHHH
T ss_pred CCccCCCCCHHHHHHHHHHHHHh
Confidence 995 257777777776653
No 106
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=79.25 E-value=13 Score=37.02 Aligned_cols=104 Identities=12% Similarity=0.054 Sum_probs=64.7
Q ss_pred HHHHHHHhCCCCEEEecccCC---------------HHHHHHHHHHHHhcCCCeEEEEEEE----cCCCcCCCCCcHHHH
Q psy15811 412 PNVEALVRAGVDYLALETIPA---------------EKEALALVKLLREFPGQKAWLSFSC----KDDTHTSHGELISSA 472 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~p~---------------~~Ea~a~~~~~~~~~~~pv~iSft~----~~~~~l~~G~~~~~~ 472 (581)
+.++...++|+|.|.+=.-.+ +..++.+++.+++ .++.|-..+.+ .+.+ -++++.+
T Consensus 87 ~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~-~G~~V~~~l~~~~~~e~~~----~~~~~~~ 161 (302)
T 2ftp_A 87 KGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQ-HQVRVRGYISCVLGCPYDG----DVDPRQV 161 (302)
T ss_dssp HHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHH-TTCEEEEEEECTTCBTTTB----CCCHHHH
T ss_pred HHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHH-CCCeEEEEEEEEeeCCcCC----CCCHHHH
Confidence 456667779999987633222 2445667777776 47776554433 3222 2455555
Q ss_pred HHHHHhhCCCCceEEEECC----CCCccchHHHHHHHhhCCCCeEEEee--CCC
Q psy15811 473 VTSCLLANPDQIQAIGVNC----VRPSHVSTLVRCIKQSHPTVQTIVYP--NKG 520 (581)
Q Consensus 473 ~~~l~~~~~~~~~~iGiNC----~~p~~~~~~l~~l~~~~~~~pl~~yp--Nag 520 (581)
++.+......+++.|.+-- ..|..+..+++.++...+++|+.+.. +.|
T Consensus 162 ~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~G 215 (302)
T 2ftp_A 162 AWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYG 215 (302)
T ss_dssp HHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTS
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCcc
Confidence 5544322334556555543 46888999999998765458999998 555
No 107
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=78.85 E-value=42 Score=34.03 Aligned_cols=188 Identities=15% Similarity=0.169 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCCCceEEec--cCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEE
Q psy15811 349 WHRPNVEALVRAGVDYLALIKPSISSQTAAS--IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 426 (581)
Q Consensus 349 l~~~av~lA~~A~~~~~~~~~~~~~v~Vags--iGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l~~~gvD~i~ 426 (581)
+..++++..+++.- ...|... +-||-.+=+.|---. -.+.++-++..+.+.+++-...++|+|+|.
T Consensus 114 ~v~rAir~iK~~~P----------~l~VitDVcLc~YT~HGHcGil~~--~~g~V~ND~Tl~~Lak~Als~A~AGADiVA 181 (356)
T 3obk_A 114 LLPRAIMALKEAFP----------DVLLLADVALDPYSSMGHDGVVDE--QSGKIVNDLTVHQLCKQAITLARAGADMVC 181 (356)
T ss_dssp HHHHHHHHHHHHST----------TCEEEEEECSGGGBTTCCSSCBCT--TTCCBCHHHHHHHHHHHHHHHHHHTCSEEE
T ss_pred hHHHHHHHHHHHCC----------CCEEEEeeccccccCCCcceeeeC--CCCCCCCHHHHHHHHHHHHHHHHcCCCeEe
Confidence 55667766555421 2455554 456654322221000 002377899999999999999999999999
Q ss_pred ecccCCHHHHHHHHHHHHh--cCCCeEEEEEEEcC--------------C----C-c---CCCCCcHHHHHHHHHhhCCC
Q psy15811 427 LETIPAEKEALALVKLLRE--FPGQKAWLSFSCKD--------------D----T-H---TSHGELISSAVTSCLLANPD 482 (581)
Q Consensus 427 ~ET~p~~~Ea~a~~~~~~~--~~~~pv~iSft~~~--------------~----~-~---l~~G~~~~~~~~~l~~~~~~ 482 (581)
=-.|-+- ...+|.+++.+ +.++++ +|.+.+= . | + -++--.-.++++.+.....-
T Consensus 182 PSdMMDG-rV~aIR~aLd~~G~~~v~I-MsYsaKyASafYGPFRdAa~Sa~p~~GDRktYQmdpaN~~EAlrE~~lDi~E 259 (356)
T 3obk_A 182 PSDMMDG-RVSAIRESLDMEGCTDTSI-LAYSCKYASSFYGPFRDALDSHMVGGTDKKTYQMDPSNSREAEREAEADASE 259 (356)
T ss_dssp ECSCCTT-HHHHHHHHHHHTTCTTSEE-EEEEEEBCCSTTHHHHHHHTCCCSTTCCSTTTSBCTTCSHHHHHHHHHHHHT
T ss_pred ccccccC-HHHHHHHHHHHCCCCCcce-ehhHHHHhhhccchhhHHhcCCCCCCCCccccCCCCCCHHHHHHHHHhhHhc
Confidence 6666652 23455555554 345664 4877651 1 0 0 11111123444433222234
Q ss_pred CceEEEECCCCCccchHHHHHHHhhCCCCeEEEeeCCCCC---cccccccccCCcCHHHHHHHHHHHHHcCCcEEe
Q psy15811 483 QIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGV---WDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG 555 (581)
Q Consensus 483 ~~~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~ypNag~~---~~~~~~~~~~~~~~~~~~~~~~~w~~~G~~iiG 555 (581)
+++.|.|.=..| .+.+++.++... ++|+.+|--||+- .-...++|.+. ..-+.|....+..+|+.+|=
T Consensus 260 GAD~vMVKPal~--YLDIi~~vk~~~-~~PvaaYqVSGEYAMikAAa~~GwiD~--~~~v~Esl~~~kRAGAd~Ii 330 (356)
T 3obk_A 260 GADMLMVKPGLP--YLDVLAKIREKS-KLPMVAYHVSGEYAMLKAAAEKGYISE--KDTVLEVLKSFRRAGADAVA 330 (356)
T ss_dssp TCSEEEEESSGG--GHHHHHHHHHHC-SSCEEEEECHHHHHHHHHHHHHTSSCH--HHHHHHHHHHHHHHTCSEEE
T ss_pred CCCEEEecCCCc--HHHHHHHHHhcC-CCCEEEEEccHHHHHHHHHHHcCCccH--HHHHHHHHHHHHHcCCCEEe
Confidence 567777765222 456677777766 7999999999851 11122568654 23456667777777877664
No 108
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=78.84 E-value=3.5 Score=42.52 Aligned_cols=62 Identities=13% Similarity=0.092 Sum_probs=41.6
Q ss_pred cCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhC---CCCceEEEeCCCC------------hhhHHHHHHHHHhhCCC
Q psy15811 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN---PDQIQAIGVNCVR------------PSHVSTLVRCIKQSHPT 254 (581)
Q Consensus 190 ~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~---~~~~~~vGvNC~~------------p~~~~~~l~~l~~~~~~ 254 (581)
.++.|+++|+. |.++++.++.+.... ..++++|=|||++ |+.+.++++.+++. .+
T Consensus 124 ~~~~pvivsI~---------G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~-~~ 193 (354)
T 4ef8_A 124 YGKKPLFLSMS---------GLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEV-YP 193 (354)
T ss_dssp TTTCCEEEEEC---------CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHH-CC
T ss_pred cCCCcEEEEec---------cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHh-hC
Confidence 34789999873 444555444332211 2467899999973 46677888888876 77
Q ss_pred CceEEec
Q psy15811 255 VQTIVYP 261 (581)
Q Consensus 255 ~p~~~~p 261 (581)
+||+++.
T Consensus 194 ~PV~vKi 200 (354)
T 4ef8_A 194 HSFGVKM 200 (354)
T ss_dssp SCEEEEE
T ss_pred CCeEEEe
Confidence 8888873
No 109
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=78.74 E-value=1.3 Score=44.70 Aligned_cols=44 Identities=18% Similarity=0.157 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEE
Q psy15811 152 AWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSF 199 (581)
Q Consensus 152 ~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isf 199 (581)
+.--++++++.++|+|.|++|.+++.+|++.+.+.+ +.|+++.+
T Consensus 175 ~~ai~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~----~~P~~~n~ 218 (305)
T 3ih1_A 175 DEAIERANAYVKAGADAIFPEALQSEEEFRLFNSKV----NAPLLANM 218 (305)
T ss_dssp HHHHHHHHHHHHHTCSEEEETTCCSHHHHHHHHHHS----CSCBEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHc----CCCEEEee
Confidence 344578899999999999999999999988877765 46887655
No 110
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=78.46 E-value=11 Score=41.05 Aligned_cols=102 Identities=11% Similarity=0.120 Sum_probs=70.1
Q ss_pred HHHHHHHHCCCcEEE-EEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeC
Q psy15811 156 PNVEALVRAGVDYLA-LETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 234 (581)
Q Consensus 156 ~q~~~l~~~gvD~l~-~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvN 234 (581)
.-++.+.++|+|.|- |-..++++.++.+++++++. +..+-++|++..+- ..+++.++..+......|++.|.+-
T Consensus 121 ~~ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~-G~~v~~~i~~~~~~----~~~~e~~~~~a~~l~~~Gad~I~L~ 195 (539)
T 1rqb_A 121 RFVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKA-GKHAQGTICYTISP----VHTVEGYVKLAGQLLDMGADSIALK 195 (539)
T ss_dssp HHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHT-TCEEEEEEECCCST----TCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHC-CCeEEEEEEeeeCC----CCCHHHHHHHHHHHHHcCCCEEEeC
Confidence 345667789999874 44667788889999999886 77776666665332 2355554444433335788888774
Q ss_pred C----CChhhHHHHHHHHHhhCC-CCceEEecC
Q psy15811 235 C----VRPSHVSTLVRCIKQSHP-TVQTIVYPN 262 (581)
Q Consensus 235 C----~~p~~~~~~l~~l~~~~~-~~p~~~~pn 262 (581)
= ..|..+..+++.+++... ++||.+..-
T Consensus 196 DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~H~H 228 (539)
T 1rqb_A 196 DMAALLKPQPAYDIIKAIKDTYGQKTQINLHCH 228 (539)
T ss_dssp ETTCCCCHHHHHHHHHHHHHHHCTTCCEEEEEB
T ss_pred CCCCCcCHHHHHHHHHHHHHhcCCCceEEEEeC
Confidence 2 359999999999987533 678887653
No 111
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=78.39 E-value=6.7 Score=40.20 Aligned_cols=135 Identities=14% Similarity=0.132 Sum_probs=82.6
Q ss_pred HHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEE
Q psy15811 409 WHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIG 488 (581)
Q Consensus 409 ~~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iG 488 (581)
.-..|+..|.++|+|++=+ |+|+..++ .++..+++..++|++.-+.|+. .-++..+ ..+++.+=
T Consensus 47 atv~Qi~~l~~aG~diVRv-avp~~~~a-~al~~I~~~~~vPlvaDiHf~~----------~lal~a~----e~G~dklR 110 (366)
T 3noy_A 47 ATLNQIKRLYEAGCEIVRV-AVPHKEDV-EALEEIVKKSPMPVIADIHFAP----------SYAFLSM----EKGVHGIR 110 (366)
T ss_dssp HHHHHHHHHHHTTCCEEEE-ECCSHHHH-HHHHHHHHHCSSCEEEECCSCH----------HHHHHHH----HTTCSEEE
T ss_pred HHHHHHHHHHHcCCCEEEe-CCCChHHH-HHHHHHHhcCCCCEEEeCCCCH----------HHHHHHH----HhCCCeEE
Confidence 3447999999999999987 78986554 5566666557899988776631 1222333 23566777
Q ss_pred ECC---CCCccchHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHH----HcCC-cEEeecCCC
Q psy15811 489 VNC---VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWL----EEGV-NIIGGCCEV 560 (581)
Q Consensus 489 iNC---~~p~~~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~----~~G~-~iiGGCCGt 560 (581)
||= .+.+.+..+++..+.. ++|+-+=-|+|.....--..|. ...|+.+.+.+.+++ +.|- +|+=-|=..
T Consensus 111 INPGNig~~~~~~~vv~~ak~~--~~piRIGvN~GSL~~~ll~~yg-~~~~eamVeSAl~~~~~~e~~gf~~iviS~K~S 187 (366)
T 3noy_A 111 INPGNIGKEEIVREIVEEAKRR--GVAVRIGVNSGSLEKDLLEKYG-YPSAEALAESALRWSEKFEKWGFTNYKVSIKGS 187 (366)
T ss_dssp ECHHHHSCHHHHHHHHHHHHHH--TCEEEEEEEGGGCCHHHHHHHS-SCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECS
T ss_pred ECCcccCchhHHHHHHHHHHHc--CCCEEEecCCcCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHhCCCCeEEEeeecC
Confidence 876 2445567778888877 4898888899954221101232 123666766655543 4463 454333333
Q ss_pred ch
Q psy15811 561 TS 562 (581)
Q Consensus 561 ~P 562 (581)
++
T Consensus 188 ~v 189 (366)
T 3noy_A 188 DV 189 (366)
T ss_dssp SH
T ss_pred Ch
Confidence 33
No 112
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=78.29 E-value=2.1 Score=43.43 Aligned_cols=46 Identities=11% Similarity=-0.049 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEE
Q psy15811 407 IAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFS 456 (581)
Q Consensus 407 ~~~~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft 456 (581)
.+.-.++++++.++|+|.|++|.+|+..+++.+.+.+ .+|+++.++
T Consensus 188 l~~ai~Ra~Ay~eAGAd~i~~e~~~~~e~~~~i~~~l----~~P~lan~~ 233 (318)
T 1zlp_A 188 LEEGIRRANLYKEAGADATFVEAPANVDELKEVSAKT----KGLRIANMI 233 (318)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHS----CSEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhc----CCCEEEEec
Confidence 3455678899999999999999999999998888765 488877554
No 113
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=77.90 E-value=12 Score=37.57 Aligned_cols=96 Identities=9% Similarity=0.033 Sum_probs=61.6
Q ss_pred HHHHHHHhCCCCEEEecccC--------------CHHHHHHHHHHHHh---cCCCeEEEEEEEcCCCcCCCCCcHHHHHH
Q psy15811 412 PNVEALVRAGVDYLALETIP--------------AEKEALALVKLLRE---FPGQKAWLSFSCKDDTHTSHGELISSAVT 474 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~p--------------~~~Ea~a~~~~~~~---~~~~pv~iSft~~~~~~l~~G~~~~~~~~ 474 (581)
..++.|.++|++.+-+|... +..|+..=++++++ ..+.+++|---+ +... +..++++++
T Consensus 99 ~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ART--Da~~--~~gldeAi~ 174 (302)
T 3fa4_A 99 RTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIART--DSLQ--THGYEESVA 174 (302)
T ss_dssp HHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEE--CCHH--HHCHHHHHH
T ss_pred HHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEe--cccc--cCCHHHHHH
Confidence 55777888999999999864 34454443333332 125666665544 3332 245999999
Q ss_pred HHHhhCCCCceEEEECC-CCCccchHHHHHHHhhCCCCeEEE
Q psy15811 475 SCLLANPDQIQAIGVNC-VRPSHVSTLVRCIKQSHPTVQTIV 515 (581)
Q Consensus 475 ~l~~~~~~~~~~iGiNC-~~p~~~~~~l~~l~~~~~~~pl~~ 515 (581)
++......++++|=+-+ .+++.+..+.+.+. +.|+.+
T Consensus 175 Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~~~----~~Pl~~ 212 (302)
T 3fa4_A 175 RLRAARDAGADVGFLEGITSREMARQVIQDLA----GWPLLL 212 (302)
T ss_dssp HHHHHHTTTCSEEEETTCCCHHHHHHHHHHTT----TSCEEE
T ss_pred HHHHHHHcCCCEEeecCCCCHHHHHHHHHHhc----CCceeE
Confidence 98777778999998888 45666655554442 357654
No 114
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=77.79 E-value=13 Score=40.06 Aligned_cols=65 Identities=23% Similarity=0.289 Sum_probs=43.3
Q ss_pred HHHHHHHHHCCCcEEEEEccC-CHHHHHHHHHHHHh-cCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEE
Q psy15811 155 RPNVEALVRAGVDYLALETIP-AEKEALALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIG 232 (581)
Q Consensus 155 ~~q~~~l~~~gvD~l~~ET~~-~~~E~~aa~~a~~~-~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vG 232 (581)
.++++.|+++|+|+|.+-+-. +...+...++.+++ .+++|+++.. ..+.+.+ ..+. ..|+++|-
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~----------v~t~e~a-~~l~---~aGaD~I~ 298 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGN----------VATAEGA-RALI---EAGVSAVK 298 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEE----------ECSHHHH-HHHH---HHTCSEEE
T ss_pred HHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcc----------cCcHHHH-HHHH---HhCCCEEE
Confidence 457889999999999887543 44555666777764 4689998722 1334443 3443 36888887
Q ss_pred e
Q psy15811 233 V 233 (581)
Q Consensus 233 v 233 (581)
+
T Consensus 299 V 299 (496)
T 4fxs_A 299 V 299 (496)
T ss_dssp E
T ss_pred E
Confidence 7
No 115
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=77.78 E-value=3.3 Score=41.81 Aligned_cols=45 Identities=22% Similarity=0.086 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEE
Q psy15811 153 WHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFS 200 (581)
Q Consensus 153 ~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft 200 (581)
.--++++++.++|+|.|++|-+++.+|++.+.+.+. ..|+++.++
T Consensus 179 eAi~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~---~~Pv~~n~~ 223 (307)
T 3lye_A 179 ECIERLRAARDEGADVGLLEGFRSKEQAAAAVAALA---PWPLLLNSV 223 (307)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHT---TSCBEEEEE
T ss_pred HHHHHHHHHHHCCCCEEEecCCCCHHHHHHHHHHcc---CCceeEEee
Confidence 345789999999999999999999999999888884 478877654
No 116
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=77.64 E-value=2.5 Score=42.53 Aligned_cols=44 Identities=16% Similarity=0.127 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHCCCcEEEEEc-cCCHHHHHHHHHHHHhcCCCcEEEE
Q psy15811 153 WHRPNVEALVRAGVDYLALET-IPAEKEALALVKLLREFPGQKAWLS 198 (581)
Q Consensus 153 ~~~~q~~~l~~~gvD~l~~ET-~~~~~E~~aa~~a~~~~~~~pv~is 198 (581)
.-.+++.++.++|+|.|++|+ +++.+|++.+.+.++. .+|+++.
T Consensus 171 ~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~--~~P~i~~ 215 (295)
T 1s2w_A 171 EALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNN--QGPVVIV 215 (295)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTT--CSCEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCC--CCCEEEe
Confidence 345688999999999999998 8999999999988852 3788765
No 117
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=77.31 E-value=19 Score=36.08 Aligned_cols=46 Identities=17% Similarity=0.096 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHCCCcEEEEEcc----CCHHHHHHHHHHHHhcCCCc-EEE
Q psy15811 152 AWHRPNVEALVRAGVDYLALETI----PAEKEALALVKLLREFPGQK-AWL 197 (581)
Q Consensus 152 ~~~~~q~~~l~~~gvD~l~~ET~----~~~~E~~aa~~a~~~~~~~p-v~i 197 (581)
+...+.++.+.+.|+|++=++.- .+.++++.+++.....+.+| |++
T Consensus 177 ~~v~~aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~ 227 (304)
T 1to3_A 177 QAIIDAAKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHINMPWVIL 227 (304)
T ss_dssp HHHHHHHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEE
Confidence 34445577788899999988874 57888888888766655788 543
No 118
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=77.23 E-value=15 Score=36.93 Aligned_cols=89 Identities=18% Similarity=0.084 Sum_probs=57.9
Q ss_pred HHHHHHHhCCCCEEEecccC--------------CHHHHH----HHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHH
Q psy15811 412 PNVEALVRAGVDYLALETIP--------------AEKEAL----ALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAV 473 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~p--------------~~~Ea~----a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~ 473 (581)
..++.|.++|++.+-+|+.- +..|.. +++++.++ .+.+++|---+ +... ...+++++
T Consensus 107 ~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~-~~~d~~I~ART--Da~~--~~gldeAi 181 (307)
T 3lye_A 107 RTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRR-LRSDFVLIART--DALQ--SLGYEECI 181 (307)
T ss_dssp HHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHH-TTCCCEEEEEE--CCHH--HHCHHHHH
T ss_pred HHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHh-cCCCeEEEEec--hhhh--ccCHHHHH
Confidence 45777888999999999853 344533 33333333 35666665544 3332 24588999
Q ss_pred HHHHhhCCCCceEEEECC-CCCccchHHHHHHH
Q psy15811 474 TSCLLANPDQIQAIGVNC-VRPSHVSTLVRCIK 505 (581)
Q Consensus 474 ~~l~~~~~~~~~~iGiNC-~~p~~~~~~l~~l~ 505 (581)
+.+.....+++++|=+-| .+++.+..+.+.+.
T Consensus 182 ~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~ 214 (307)
T 3lye_A 182 ERLRAARDEGADVGLLEGFRSKEQAAAAVAALA 214 (307)
T ss_dssp HHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCEEEecCCCCHHHHHHHHHHcc
Confidence 988766678889998988 45566666655553
No 119
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=76.71 E-value=28 Score=33.98 Aligned_cols=101 Identities=14% Similarity=0.082 Sum_probs=64.9
Q ss_pred HHHHHHHHHHCC-CcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEE
Q psy15811 154 HRPNVEALVRAG-VDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIG 232 (581)
Q Consensus 154 ~~~q~~~l~~~g-vD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vG 232 (581)
|....+.+.+.| ||++=+|-...-+-....++.+++. +..+++|+.--+ .+++-+.+.+.+..+. ..++|.+=
T Consensus 101 ~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~l~~~a~~~-~~kiI~S~Hdf~--~TP~~~el~~~~~~~~---~~gaDIvK 174 (258)
T 4h3d_A 101 YTTLNKEISNTGLVDLIDVELFMGDEVIDEVVNFAHKK-EVKVIISNHDFN--KTPKKEEIVSRLCRMQ---ELGADLPK 174 (258)
T ss_dssp HHHHHHHHHHTTCCSEEEEEGGGCHHHHHHHHHHHHHT-TCEEEEEEEESS--CCCCHHHHHHHHHHHH---HTTCSEEE
T ss_pred HHHHHHHHHhcCCchhhHHhhhccHHHHHHHHHHHHhC-CCEEEEEEecCC--CCCCHHHHHHHHHHHH---HhCCCEEE
Confidence 444445555655 9999999887776667777777764 889999996332 2333333444444443 57788877
Q ss_pred eCCC--ChhhHHHHHHHHH---hhCCCCceEEe
Q psy15811 233 VNCV--RPSHVSTLVRCIK---QSHPTVQTIVY 260 (581)
Q Consensus 233 vNC~--~p~~~~~~l~~l~---~~~~~~p~~~~ 260 (581)
+-+. .+++...+++... ..+.+.|++.+
T Consensus 175 ia~~~~~~~D~l~Ll~~~~~~~~~~~~~P~I~~ 207 (258)
T 4h3d_A 175 IAVMPQNEKDVLVLLEATNEMFKIYADRPIITM 207 (258)
T ss_dssp EEECCSSHHHHHHHHHHHHHHHHHTCSSCBEEE
T ss_pred EEEccCCHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 7775 5777766665443 32357787765
No 120
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=76.45 E-value=4.5 Score=40.55 Aligned_cols=93 Identities=12% Similarity=0.074 Sum_probs=55.6
Q ss_pred HHHHHCCCcEEEEEccCCHH-------------------------HHHHHHHHHH---hcCCCcEEEEEEEcCCCcCCCC
Q psy15811 159 EALVRAGVDYLALETIPAEK-------------------------EALALVKLLR---EFPGQKAWLSFSCKDDTHTSHG 210 (581)
Q Consensus 159 ~~l~~~gvD~l~~ET~~~~~-------------------------E~~aa~~a~~---~~~~~pv~isft~~~~g~l~~G 210 (581)
+.+.+.|+.++..+|++... .....++.++ +.++.|+++|+. |
T Consensus 32 ~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~~p~~~~i~---------g 102 (314)
T 2e6f_A 32 RCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLKYASDLHDYSKKPLFLSIS---------G 102 (314)
T ss_dssp HHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHTCCTTTCCEEEEEC---------C
T ss_pred HHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHHHHHHHhhcCCCcEEEEeC---------C
Confidence 44578899999887754221 0122222233 224789998873 3
Q ss_pred CCHHHHHHHHHhhCCCCce---EEEeCCCC------------hhhHHHHHHHHHhhCCCCceEEec
Q psy15811 211 ELISSAVTSCLLANPDQIQ---AIGVNCVR------------PSHVSTLVRCIKQSHPTVQTIVYP 261 (581)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~---~vGvNC~~------------p~~~~~~l~~l~~~~~~~p~~~~p 261 (581)
.++++....+......+++ +|=+|+++ |+.+.++++.+++. .++|++++-
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~-~~~Pv~vK~ 167 (314)
T 2e6f_A 103 LSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLA-YGLPFGVKM 167 (314)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHH-HCSCEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHh-cCCCEEEEE
Confidence 4455444433222235678 88898863 44566788888775 577888763
No 121
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=76.26 E-value=11 Score=37.46 Aligned_cols=100 Identities=11% Similarity=0.006 Sum_probs=60.8
Q ss_pred HHHHHHHCCCcEEEEEc-cC--------------CHHHHHHHHHHHHhcCCCcEEEEE----EEcCCCcCCCCCCHHHHH
Q psy15811 157 NVEALVRAGVDYLALET-IP--------------AEKEALALVKLLREFPGQKAWLSF----SCKDDTHTSHGELISSAV 217 (581)
Q Consensus 157 q~~~l~~~gvD~l~~ET-~~--------------~~~E~~aa~~a~~~~~~~pv~isf----t~~~~g~l~~G~~~~~~~ 217 (581)
.++..+++|+|.+-+-. .+ +++.++.+++.+++. +++|-..+ .+++.++ .+++.++
T Consensus 84 ~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~-G~~V~~~l~~~~~~e~~~~----~~~~~~~ 158 (295)
T 1ydn_A 84 GYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAIND-GLAIRGYVSCVVECPYDGP----VTPQAVA 158 (295)
T ss_dssp HHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHT-TCEEEEEEECSSEETTTEE----CCHHHHH
T ss_pred HHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHc-CCeEEEEEEEEecCCcCCC----CCHHHHH
Confidence 45667789999987753 12 345555667777775 77776333 3333322 3455555
Q ss_pred HHHHhhCCCCceEEEeCC----CChhhHHHHHHHHHhhCCCCceEEec
Q psy15811 218 TSCLLANPDQIQAIGVNC----VRPSHVSTLVRCIKQSHPTVQTIVYP 261 (581)
Q Consensus 218 ~~~~~~~~~~~~~vGvNC----~~p~~~~~~l~~l~~~~~~~p~~~~p 261 (581)
+.+......|++.|.+-= ..|..+.++++.+++...++||.+..
T Consensus 159 ~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l~~H~ 206 (295)
T 1ydn_A 159 SVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSLAGHY 206 (295)
T ss_dssp HHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGEEEEE
T ss_pred HHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 444322235677665542 35999999999999852236777664
No 122
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=76.24 E-value=4.8 Score=43.59 Aligned_cols=64 Identities=13% Similarity=0.162 Sum_probs=39.5
Q ss_pred HHHHHHCCCcEEEEE----c-----------cCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHh
Q psy15811 158 VEALVRAGVDYLALE----T-----------IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLL 222 (581)
Q Consensus 158 ~~~l~~~gvD~l~~E----T-----------~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~ 222 (581)
++.+.++|||+|.+= + .|.+.-+..+.+++++. ++|||++. -..++ .++++++
T Consensus 311 a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~-~iPVIa~G------GI~~~---~di~kal-- 378 (511)
T 3usb_A 311 TKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKH-GIPVIADG------GIKYS---GDMVKAL-- 378 (511)
T ss_dssp HHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTT-TCCEEEES------CCCSH---HHHHHHH--
T ss_pred HHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhC-CCcEEEeC------CCCCH---HHHHHHH--
Confidence 567888999999861 1 34454455555666654 79999743 23344 4444443
Q ss_pred hCCCCceEEEeCC
Q psy15811 223 ANPDQIQAIGVNC 235 (581)
Q Consensus 223 ~~~~~~~~vGvNC 235 (581)
..|+++|++-=
T Consensus 379 --a~GA~~V~vGs 389 (511)
T 3usb_A 379 --AAGAHVVMLGS 389 (511)
T ss_dssp --HTTCSEEEEST
T ss_pred --HhCchhheecH
Confidence 25788887764
No 123
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=76.20 E-value=15 Score=39.39 Aligned_cols=66 Identities=24% Similarity=0.281 Sum_probs=44.6
Q ss_pred HHHHHHHHHHCCCcEEEEEcc-CCHHHHHHHHHHHHh-cCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEE
Q psy15811 154 HRPNVEALVRAGVDYLALETI-PAEKEALALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 231 (581)
Q Consensus 154 ~~~q~~~l~~~gvD~l~~ET~-~~~~E~~aa~~a~~~-~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~v 231 (581)
+.++++.|+++|+|+|.+-|- .+.......++.+++ .+++|+++.. ..+.+++ ..+. ..|+++|
T Consensus 230 ~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~----------v~t~e~a-~~l~---~aGaD~I 295 (490)
T 4avf_A 230 TGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGN----------IATAEAA-KALA---EAGADAV 295 (490)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEE----------ECSHHHH-HHHH---HTTCSEE
T ss_pred hHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEee----------eCcHHHH-HHHH---HcCCCEE
Confidence 456789999999999988643 344555666777765 3578988732 2345544 3443 3789999
Q ss_pred Ee
Q psy15811 232 GV 233 (581)
Q Consensus 232 Gv 233 (581)
-+
T Consensus 296 ~v 297 (490)
T 4avf_A 296 KV 297 (490)
T ss_dssp EE
T ss_pred EE
Confidence 88
No 124
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=75.92 E-value=54 Score=34.64 Aligned_cols=36 Identities=6% Similarity=-0.033 Sum_probs=27.7
Q ss_pred CcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcC
Q psy15811 166 VDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKD 203 (581)
Q Consensus 166 vD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~ 203 (581)
+-+.-|-+ .+++-++++++++++. +.||++..|...
T Consensus 21 ~gi~av~~-~n~e~i~Ail~aAee~-~sPVIIe~t~~q 56 (450)
T 3txv_A 21 RGIPSICS-AHPLVIEAAMLRAHRE-KAPVLIEATCNQ 56 (450)
T ss_dssp CCEEEECC-CCHHHHHHHHHHHHHS-CSCEEEEEETTT
T ss_pred cEEEEeCc-CCHHHHHHHHHHHHHh-CCCEEEEcChhh
Confidence 44444433 6888999999999986 899999988653
No 125
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=75.70 E-value=18 Score=36.28 Aligned_cols=187 Identities=17% Similarity=0.146 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCCCceEEec--cCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEE
Q psy15811 349 WHRPNVEALVRAGVDYLALIKPSISSQTAAS--IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 426 (581)
Q Consensus 349 l~~~av~lA~~A~~~~~~~~~~~~~v~Vags--iGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l~~~gvD~i~ 426 (581)
+..++++..+++.- ..+|... +-||...=+.|--- -.+.++.++..+.+.+++-...++|+|+|.
T Consensus 100 ~v~~air~iK~~~p----------dl~vitDvcLc~YT~HGHcGil~---~~g~v~ND~Tl~~La~~Als~A~AGAdiVA 166 (330)
T 1pv8_A 100 PAIEAIHLLRKTFP----------NLLVACDVCLCPYTSHGHCGLLS---ENGAFRAEESRQRLAEVALAYAKAGCQVVA 166 (330)
T ss_dssp HHHHHHHHHHHHST----------TSEEEEEECCC------------------CHHHHHHHHHHHHHHHHHHHHTCSEEE
T ss_pred hHHHHHHHHHHHCC----------CeEEEEeeecccccCCCceeEEC---CCCcCccHHHHHHHHHHHHHHHHcCCCeee
Confidence 56667766655421 2455543 55664432222100 012356788888999999999999999999
Q ss_pred ecccCCHHHHHHHHHHHHh--cCC-CeEEEEEEEcC--------------------C-CcCCCCCcHHHHHHHHHhhCCC
Q psy15811 427 LETIPAEKEALALVKLLRE--FPG-QKAWLSFSCKD--------------------D-THTSHGELISSAVTSCLLANPD 482 (581)
Q Consensus 427 ~ET~p~~~Ea~a~~~~~~~--~~~-~pv~iSft~~~--------------------~-~~l~~G~~~~~~~~~l~~~~~~ 482 (581)
=-.|-+- ...++.+++.+ +.+ ++ ++|.+.+- + ..-++--.-.++++.+.....-
T Consensus 167 PSdMMDG-rV~aIR~aLd~~G~~~~v~-ImsYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~E 244 (330)
T 1pv8_A 167 PSDMMDG-RVEAIKEALMAHGLGNRVS-VMSYSAKFASCFYGPFRDAAKSSPAFGDRRCYQLPPGARGLALRAVDRDVRE 244 (330)
T ss_dssp ECC--CC-HHHHHHHHHHHTTCTTTCE-EBCCCEECCCGGGHHHHHCC-------------CCTTCHHHHHHHHHHHHHT
T ss_pred ccccccc-HHHHHHHHHHhCCCcCCce-EeehhHHHhHhhhhHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHh
Confidence 6555552 23455555554 345 44 44666541 0 0112222233454444222234
Q ss_pred CceEEEECCCCCccchHHHHHHHhhCCCCeEEEeeCCCC---CcccccccccCCcCHHHHHHHHHHHHHcCCcEE
Q psy15811 483 QIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGG---VWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554 (581)
Q Consensus 483 ~~~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~ypNag~---~~~~~~~~~~~~~~~~~~~~~~~~w~~~G~~ii 554 (581)
+++.|.|.=..| .+.+++.++...+++|+.+|--+|+ ..-....+|.+. ..-+.|....+..+|+.+|
T Consensus 245 GAD~vMVKPal~--YLDIi~~vk~~~p~~P~aaYqVSGEYAMikaAa~~GwiD~--~~~v~Esl~~~kRAGAd~I 315 (330)
T 1pv8_A 245 GADMLMVKPGMP--YLDIVREVKDKHPDLPLAVYHVSGEFAMLWHGAQAGAFDL--KAAVLEAMTAFRRAGADII 315 (330)
T ss_dssp TCSBEEEESCGG--GHHHHHHHHHHSTTSCEEEEECHHHHHHHHHHHHTTSSCH--HHHHHHHHHHHHHHTCSEE
T ss_pred CCceEEEecCcc--HHHHHHHHHHhcCCCCeEEEEcCcHHHHHHHHHHcCCccH--HHHHHHHHHHHHhcCCCEE
Confidence 567777765322 4567777887765799999999985 111222568664 3356777788888898876
No 126
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=75.41 E-value=8.6 Score=38.13 Aligned_cols=105 Identities=17% Similarity=0.075 Sum_probs=63.2
Q ss_pred HHHHHHHHHHhCC-CCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEE
Q psy15811 409 WHRPNVEALVRAG-VDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487 (581)
Q Consensus 409 ~~~~~~~~l~~~g-vD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~i 487 (581)
.|.+..+..++.| +|+|=+|-...-...+.+++.+++ .+.++++|+.- -..+++-+.+.+.++.+ ...+++.+
T Consensus 120 ~~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~-~~~kvI~S~Hd--f~~tP~~~el~~~~~~~---~~~GaDIv 193 (276)
T 3o1n_A 120 QYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQ-HNVAVIMSNHD--FHKTPAAEEIVQRLRKM---QELGADIP 193 (276)
T ss_dssp HHHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHH-TTCEEEEEEEE--SSCCCCHHHHHHHHHHH---HHTTCSEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHh-CCCEEEEEeec--CCCCcCHHHHHHHHHHH---HHcCCCEE
Confidence 3444444455567 999999977665556666666676 58999999953 33344433455555554 23355555
Q ss_pred EECC--CCCccchHHHHHHH---hhCCCCeEEEeeCC
Q psy15811 488 GVNC--VRPSHVSTLVRCIK---QSHPTVQTIVYPNK 519 (581)
Q Consensus 488 GiNC--~~p~~~~~~l~~l~---~~~~~~pl~~ypNa 519 (581)
=+-+ .+++++..+++... ....+.|++.+.-+
T Consensus 194 Kia~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG 230 (276)
T 3o1n_A 194 KIAVMPQTKADVLTLLTATVEMQERYADRPIITMSMS 230 (276)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHTCCSCCEEEECS
T ss_pred EEEecCCChHHHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 5544 45566666665433 22236899988643
No 127
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=75.35 E-value=28 Score=34.50 Aligned_cols=100 Identities=14% Similarity=0.121 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCC------cCCCCC--cHHHHHHHHHhh
Q psy15811 408 AWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDT------HTSHGE--LISSAVTSCLLA 479 (581)
Q Consensus 408 ~~~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~------~l~~G~--~~~~~~~~l~~~ 479 (581)
+.++..++.+.++|++.+-+|.-. |....++++.+ .++||+-|+=+.+.. ....|- ..+++++..+..
T Consensus 113 ~a~~na~rl~~eaGa~aVklEdg~---e~~~~I~al~~-agIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~ 188 (281)
T 1oy0_A 113 AALAAATRFLKDGGAHAVKLEGGE---RVAEQIACLTA-AGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAV 188 (281)
T ss_dssp HHHHHHHHHHHTTCCSEEEEEBSG---GGHHHHHHHHH-HTCCEEEEEECCC--------------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCeEEEECCcH---HHHHHHHHHHH-CCCCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHHHHH
Confidence 344455666777999999999974 44555555555 589999777553321 222232 245555555445
Q ss_pred CCCCceEEEECCCCCccchHHHHHHHhhCCCCeEEEe
Q psy15811 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVY 516 (581)
Q Consensus 480 ~~~~~~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~y 516 (581)
..+++++|=+-|.. . .+.+++.... ++|++..
T Consensus 189 ~eAGA~~ivlE~vp-~---~~a~~it~~l-~iP~igI 220 (281)
T 1oy0_A 189 AEAGAFAVVMEMVP-A---ELATQITGKL-TIPTVGI 220 (281)
T ss_dssp HHHTCSEEEEESCC-H---HHHHHHHHHC-SSCEEEE
T ss_pred HHcCCcEEEEecCC-H---HHHHHHHHhC-CCCEEEe
Confidence 56788999999964 2 3456666655 5887764
No 128
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=75.32 E-value=17 Score=37.22 Aligned_cols=114 Identities=17% Similarity=0.123 Sum_probs=65.2
Q ss_pred CCCCEEEecccCCHHHH----HHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECCCCCc
Q psy15811 420 AGVDYLALETIPAEKEA----LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495 (581)
Q Consensus 420 ~gvD~i~~ET~p~~~Ea----~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~~p~ 495 (581)
.++++++-|.+..-... +.+++ ++. .+.|+++.+... +-+.+.++++.+ ...++++|-|||..|.
T Consensus 27 Gg~gli~te~~~~~~~~~~~~~~~~~-~~~-~~~p~~vQL~g~------~p~~~~~aA~~a---~~~G~D~IeIn~gcP~ 95 (350)
T 3b0p_A 27 SLGVRLYTEMTVDQAVLRGNRERLLA-FRP-EEHPIALQLAGS------DPKSLAEAARIG---EAFGYDEINLNLGCPS 95 (350)
T ss_dssp CSSSBEECCCEEHHHHHHSCHHHHHC-CCG-GGCSEEEEEECS------CHHHHHHHHHHH---HHTTCSEEEEEECCCS
T ss_pred CCCCEEEeCCEEechhhcCCHHHHhc-cCC-CCCeEEEEeCCC------CHHHHHHHHHHH---HHcCCCEEEECCcCCC
Confidence 46799999987642211 11111 122 468999999632 123455565555 3457899999985443
Q ss_pred -----------------cchHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHHHcCCcEE
Q psy15811 496 -----------------HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554 (581)
Q Consensus 496 -----------------~~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~~G~~ii 554 (581)
.+..+++.++... ++|+.+.-..| |....+.+...++++.+.+.|+..|
T Consensus 96 ~~~~~d~~G~~l~~~~~~~~eiv~av~~~v-~~PV~vKiR~g---------~~~~~~~~~~~~~a~~l~~aG~d~I 161 (350)
T 3b0p_A 96 EKAQEGGYGACLLLDLARVREILKAMGEAV-RVPVTVKMRLG---------LEGKETYRGLAQSVEAMAEAGVKVF 161 (350)
T ss_dssp HHHHHTTCGGGGGGCHHHHHHHHHHHHHHC-SSCEEEEEESC---------BTTCCCHHHHHHHHHHHHHTTCCEE
T ss_pred CcCcCCCcchhHHhCHHHHHHHHHHHHHHh-CCceEEEEecC---------cCccccHHHHHHHHHHHHHcCCCEE
Confidence 2444566666655 68988843332 1111123456677777778886543
No 129
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=74.81 E-value=12 Score=37.09 Aligned_cols=104 Identities=13% Similarity=0.068 Sum_probs=63.1
Q ss_pred HHHHHHHhCCCCEEEecc-cC--------------CHHHHHHHHHHHHhcCCCeEE--EE--EEEcCCCcCCCCCcHHHH
Q psy15811 412 PNVEALVRAGVDYLALET-IP--------------AEKEALALVKLLREFPGQKAW--LS--FSCKDDTHTSHGELISSA 472 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET-~p--------------~~~Ea~a~~~~~~~~~~~pv~--iS--ft~~~~~~l~~G~~~~~~ 472 (581)
+.++...++|+|.|.+-. .+ ++..++.+++.+++ .+++|- ++ |.|.+.++ ++++.+
T Consensus 83 ~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~-~G~~V~~~l~~~~~~e~~~~----~~~~~~ 157 (295)
T 1ydn_A 83 KGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAIN-DGLAIRGYVSCVVECPYDGP----VTPQAV 157 (295)
T ss_dssp HHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHH-TTCEEEEEEECSSEETTTEE----CCHHHH
T ss_pred HHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHH-cCCeEEEEEEEEecCCcCCC----CCHHHH
Confidence 456677789999987753 22 24555566777777 588876 34 33443322 344444
Q ss_pred HHHHHhhCCCCceEEEECC----CCCccchHHHHHHHhhCCCCeEEEee--CCC
Q psy15811 473 VTSCLLANPDQIQAIGVNC----VRPSHVSTLVRCIKQSHPTVQTIVYP--NKG 520 (581)
Q Consensus 473 ~~~l~~~~~~~~~~iGiNC----~~p~~~~~~l~~l~~~~~~~pl~~yp--Nag 520 (581)
++.+......+++.|.+.- ..|..+..+++.++...+.+|+.+.. +.|
T Consensus 158 ~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~G 211 (295)
T 1ydn_A 158 ASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGG 211 (295)
T ss_dssp HHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTS
T ss_pred HHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCcc
Confidence 4443222233555555542 46888999999998876337898888 444
No 130
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=74.75 E-value=14 Score=37.57 Aligned_cols=145 Identities=12% Similarity=0.038 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEE-ecccCC-----------HHHHHHHHHHHHhcC---CCeEEEEEEEcCCCcCCCCCc
Q psy15811 404 ADLIAWHRPNVEALVRAGVDYLA-LETIPA-----------EKEALALVKLLREFP---GQKAWLSFSCKDDTHTSHGEL 468 (581)
Q Consensus 404 ~~~~~~~~~~~~~l~~~gvD~i~-~ET~p~-----------~~Ea~a~~~~~~~~~---~~pv~iSft~~~~~~l~~G~~ 468 (581)
+.+.+...+.++.+.++|+|.|. +++... ..-.+.+++.+++.. ++| +++|++.. ..
T Consensus 183 ~~l~~~~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~~~~-ii~~~~g~-~~------ 254 (354)
T 3cyv_A 183 DKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVP-VTLFTKGG-GQ------ 254 (354)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHSCSEETTEECC-EEEECTTT-TT------
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCC-EEEECCCH-HH------
Confidence 34445556667777789999884 564322 122333444444321 477 66775422 11
Q ss_pred HHHHHHHHHhhCCCCceEEEECCCCCccchHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHHH
Q psy15811 469 ISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLE 548 (581)
Q Consensus 469 ~~~~~~~l~~~~~~~~~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 548 (581)
.+..+ ...++++|++--. ..+..+-+.+ +.+ +.+.-|--. . .. ..+++++.+.+++.++
T Consensus 255 ---~l~~l---~~~g~d~i~~d~~--~dl~~~~~~~---g~~--~~l~Gn~dp----~--~l--~~t~e~i~~~v~~~l~ 313 (354)
T 3cyv_A 255 ---WLEAM---AETGCDALGLDWT--TDIADARRRV---GNK--VALQGNMDP----S--ML--YAPPARIEEEVATILA 313 (354)
T ss_dssp ---THHHH---HTTSCSEEECCTT--SCHHHHHHHH---TTT--SEEECCBCG----G--GG--GSCHHHHHHHHHHHHT
T ss_pred ---HHHHH---HhcCCCEEEeCCC--CCHHHHHHHh---CCC--eEEEecCCh----H--Hh--CCCHHHHHHHHHHHHH
Confidence 22344 2346787776421 1232332222 212 345555321 1 11 3457889999999887
Q ss_pred c-CC---cEEeecCC----CchHHHHHHHHHHhcccC
Q psy15811 549 E-GV---NIIGGCCE----VTSYEIQQMRIMIDEFNT 577 (581)
Q Consensus 549 ~-G~---~iiGGCCG----t~P~hI~al~~~l~~~~~ 577 (581)
. |. -|++--|| |.|++++++.+.++++..
T Consensus 314 ~~g~~~g~I~~~g~gi~~~~p~env~a~v~~v~~~~~ 350 (354)
T 3cyv_A 314 GFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVHRLSE 350 (354)
T ss_dssp TTTTSSCEEBCBSSCCCTTSCHHHHHHHHHHHHHHHG
T ss_pred HhCCCCCeEEecCCCCCCCCCHHHHHHHHHHHHHHhH
Confidence 5 54 47776677 578999999999887644
No 131
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=74.73 E-value=18 Score=34.58 Aligned_cols=86 Identities=13% Similarity=0.165 Sum_probs=55.1
Q ss_pred HHHHHHHHhCCCCEEEe-----cccCCHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCC
Q psy15811 411 RPNVEALVRAGVDYLAL-----ETIPAEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQ 483 (581)
Q Consensus 411 ~~~~~~l~~~gvD~i~~-----ET~p~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~ 483 (581)
.+.++.+.++|+|.+-+ -.+|++.....+++.+|+. +++|+-+++-+.+... .+ +.+. ..+
T Consensus 20 ~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~-----~i----~~~~---~aG 87 (228)
T 3ovp_A 20 GAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQ-----WV----KPMA---VAG 87 (228)
T ss_dssp HHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGGG-----GH----HHHH---HHT
T ss_pred HHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHHH-----HH----HHHH---HcC
Confidence 36777788899998877 4567777777788888876 6889999998754311 12 2221 124
Q ss_pred ceEEEECCCCCccchHHHHHHHhhC
Q psy15811 484 IQAIGVNCVRPSHVSTLVRCIKQSH 508 (581)
Q Consensus 484 ~~~iGiNC~~p~~~~~~l~~l~~~~ 508 (581)
++.|-+-+-...++...++.++..+
T Consensus 88 ad~itvH~Ea~~~~~~~i~~i~~~G 112 (228)
T 3ovp_A 88 ANQYTFHLEATENPGALIKDIRENG 112 (228)
T ss_dssp CSEEEEEGGGCSCHHHHHHHHHHTT
T ss_pred CCEEEEccCCchhHHHHHHHHHHcC
Confidence 4555555533345666677776654
No 132
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=74.60 E-value=2.7 Score=42.26 Aligned_cols=45 Identities=16% Similarity=0.084 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEE
Q psy15811 408 AWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFS 456 (581)
Q Consensus 408 ~~~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft 456 (581)
+.-.++++++.++|+|.|++|.+|+..+++.+.+.+ ++|+++.++
T Consensus 167 ~~ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~----~iP~~~N~~ 211 (295)
T 1xg4_A 167 DAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAV----QVPILANIT 211 (295)
T ss_dssp HHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHH----CSCBEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHc----CCCEEEEec
Confidence 445578899999999999999999999999888877 378776664
No 133
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=74.20 E-value=41 Score=33.94 Aligned_cols=113 Identities=12% Similarity=0.153 Sum_probs=69.4
Q ss_pred CCCHHH---HHHHHHHHHHHHHhCCCCEEEeccc----------CC---------------HHHHHHHHHHHHhcCCCeE
Q psy15811 400 SMTEAD---LIAWHRPNVEALVRAGVDYLALETI----------PA---------------EKEALALVKLLREFPGQKA 451 (581)
Q Consensus 400 ~~~~~~---~~~~~~~~~~~l~~~gvD~i~~ET~----------p~---------------~~Ea~a~~~~~~~~~~~pv 451 (581)
.++.+| +.+.|.+.++.+.++|.|.|=+--- |. ..-+..+++++++..+.|+
T Consensus 133 ~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv 212 (338)
T 1z41_A 133 EMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPL 212 (338)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcE
Confidence 355555 5677888888889999999844321 21 1224556666665458898
Q ss_pred EEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECCC---------CCccchHHHHHHHhhCCCCeEEE
Q psy15811 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV---------RPSHVSTLVRCIKQSHPTVQTIV 515 (581)
Q Consensus 452 ~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~---------~p~~~~~~l~~l~~~~~~~pl~~ 515 (581)
.+-++..+ ....|.+.++++..+..+...+++.|-+-.. .|..-...++.+++.. ++|+++
T Consensus 213 ~vris~~~--~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~ 282 (338)
T 1z41_A 213 FVRVSASD--YTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA-DMATGA 282 (338)
T ss_dssp EEEEECCC--CSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-CCEEEE
T ss_pred EEEecCcc--cCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC-CCCEEE
Confidence 88887643 2335777776666554444556777666442 1222346677777765 588764
No 134
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=73.95 E-value=22 Score=33.58 Aligned_cols=85 Identities=18% Similarity=0.270 Sum_probs=50.8
Q ss_pred HHHHHHHHhCCCCEEEec-----ccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCce
Q psy15811 411 RPNVEALVRAGVDYLALE-----TIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ 485 (581)
Q Consensus 411 ~~~~~~l~~~gvD~i~~E-----T~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~ 485 (581)
.+.++.+.++|+|+|=+- .+|+.......++.+++..+.|+.+.+.+.+ ..+.++.+. ..+++
T Consensus 26 ~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~l~vnd---------~~~~v~~~~---~~Gad 93 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIVE---------PDQRVPDFI---KAGAD 93 (230)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEESSS---------HHHHHHHHH---HTTCS
T ss_pred HHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhccCCcEEEEEEecC---------HHHHHHHHH---HcCCC
Confidence 467888889999987552 2344323345556677655789988887754 223344431 23566
Q ss_pred EEEECCC--CCccchHHHHHHHhh
Q psy15811 486 AIGVNCV--RPSHVSTLVRCIKQS 507 (581)
Q Consensus 486 ~iGiNC~--~p~~~~~~l~~l~~~ 507 (581)
+|-+-.. .++.....++.++..
T Consensus 94 ~v~vh~~~~~~~~~~~~~~~~~~~ 117 (230)
T 1rpx_A 94 IVSVHCEQSSTIHLHRTINQIKSL 117 (230)
T ss_dssp EEEEECSTTTCSCHHHHHHHHHHT
T ss_pred EEEEEecCccchhHHHHHHHHHHc
Confidence 6655555 445555666666654
No 135
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=73.79 E-value=25 Score=34.30 Aligned_cols=93 Identities=12% Similarity=0.118 Sum_probs=51.4
Q ss_pred HHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeC
Q psy15811 155 RPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 234 (581)
Q Consensus 155 ~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvN 234 (581)
..-++.+.++|+|.+++=.++ .+|+...++.+++. ++.++ .+ +.++ ++.+ -+..+.+....-+..+++.
T Consensus 112 ~~f~~~~~~aG~dgvii~dl~-~ee~~~~~~~~~~~-gl~~i-~l-~~p~------t~~~-rl~~ia~~a~gfiy~vs~~ 180 (262)
T 2ekc_A 112 EKFCRLSREKGIDGFIVPDLP-PEEAEELKAVMKKY-VLSFV-PL-GAPT------STRK-RIKLICEAADEMTYFVSVT 180 (262)
T ss_dssp HHHHHHHHHTTCCEEECTTCC-HHHHHHHHHHHHHT-TCEEC-CE-ECTT------CCHH-HHHHHHHHCSSCEEEESSC
T ss_pred HHHHHHHHHcCCCEEEECCCC-HHHHHHHHHHHHHc-CCcEE-EE-eCCC------CCHH-HHHHHHHhCCCCEEEEecC
Confidence 445666788999988875554 37888889999886 66543 22 2211 2222 2222222222223333333
Q ss_pred C-CC-----h-hhHHHHHHHHHhhCCCCceEE
Q psy15811 235 C-VR-----P-SHVSTLVRCIKQSHPTVQTIV 259 (581)
Q Consensus 235 C-~~-----p-~~~~~~l~~l~~~~~~~p~~~ 259 (581)
- +| + ..+.+.++.+++. .++|+.+
T Consensus 181 g~TG~~~~~~~~~~~~~v~~vr~~-~~~pv~v 211 (262)
T 2ekc_A 181 GTTGAREKLPYERIKKKVEEYREL-CDKPVVV 211 (262)
T ss_dssp C---------CHHHHHHHHHHHHH-CCSCEEE
T ss_pred CccCCCCCcCcccHHHHHHHHHhh-cCCCEEE
Confidence 2 12 2 4466788888886 6777655
No 136
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=73.65 E-value=19 Score=35.14 Aligned_cols=140 Identities=9% Similarity=0.026 Sum_probs=77.6
Q ss_pred HHHHHHHHhCCCCEEEecccC--------CHHHHHHHHHHHHhc---CCCeEEEEEEEcC--CCcCCCCCcHHHHHHHHH
Q psy15811 411 RPNVEALVRAGVDYLALETIP--------AEKEALALVKLLREF---PGQKAWLSFSCKD--DTHTSHGELISSAVTSCL 477 (581)
Q Consensus 411 ~~~~~~l~~~gvD~i~~ET~p--------~~~Ea~a~~~~~~~~---~~~pv~iSft~~~--~~~l~~G~~~~~~~~~l~ 477 (581)
...++.|.++|++.+-+|.-. +..|...-++++++- .++|+.|--.... .++....+.++++++..+
T Consensus 96 ~~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~ 175 (255)
T 2qiw_A 96 ADLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIK 175 (255)
T ss_dssp HHHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHHHH
Confidence 356667778999999999873 234555555555531 2788665554322 011101234788888776
Q ss_pred hhCCCCceEEEECCCCCccchHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHHHcCCcEEeec
Q psy15811 478 LANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGC 557 (581)
Q Consensus 478 ~~~~~~~~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~~G~~iiGGC 557 (581)
.....++++|=+-|..- ...++.+.... ++|+.+--..+ ++.+..+. .++.++|+++|=
T Consensus 176 a~~eAGAd~i~~e~~~~---~~~~~~i~~~~-~~P~n~~~~~~--------~~~p~~~~-------~eL~~lGv~~v~-- 234 (255)
T 2qiw_A 176 LMEQAGARSVYPVGLST---AEQVERLVDAV-SVPVNITAHPV--------DGHGAGDL-------ATLAGLGVRRVT-- 234 (255)
T ss_dssp HHHHHTCSEEEECCCCS---HHHHHHHHTTC-SSCBEEECBTT--------TBBTTBCH-------HHHHHTTCCEEE--
T ss_pred HHHHcCCcEEEEcCCCC---HHHHHHHHHhC-CCCEEEEecCC--------CCCCCCCH-------HHHHHcCCCEEE--
Confidence 66667889888988421 13445555544 46764331111 11111222 567788987763
Q ss_pred CCCchHHHHHHHHHHh
Q psy15811 558 CEVTSYEIQQMRIMID 573 (581)
Q Consensus 558 CGt~P~hI~al~~~l~ 573 (581)
.|.+ -++++.+.+.
T Consensus 235 ~~~~--a~~a~~~~~~ 248 (255)
T 2qiw_A 235 FGPL--WQKWLAATSA 248 (255)
T ss_dssp CTTH--HHHHHHHHHH
T ss_pred EHHH--HHHHHHHHHH
Confidence 2222 5555555544
No 137
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=73.33 E-value=21 Score=36.87 Aligned_cols=66 Identities=23% Similarity=0.279 Sum_probs=44.9
Q ss_pred HHHHHHHHHHCCCcEEEEEccC-CHHHHHHHHHHHHh-cCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEE
Q psy15811 154 HRPNVEALVRAGVDYLALETIP-AEKEALALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 231 (581)
Q Consensus 154 ~~~q~~~l~~~gvD~l~~ET~~-~~~E~~aa~~a~~~-~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~v 231 (581)
+.++++.++++|||+|.+.|.. +..+....++.+++ .+++|+++-. ..+.+++.. +. ..|+|+|
T Consensus 109 ~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~----------v~t~e~A~~-a~---~aGAD~I 174 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGN----------VATAEGARA-LI---EAGVSAV 174 (366)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEE----------ECSHHHHHH-HH---HHTCSEE
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeee----------eCCHHHHHH-HH---HcCCCEE
Confidence 3567899999999999998753 34566667777775 3588887632 134555543 33 3678888
Q ss_pred Ee
Q psy15811 232 GV 233 (581)
Q Consensus 232 Gv 233 (581)
.+
T Consensus 175 ~v 176 (366)
T 4fo4_A 175 KV 176 (366)
T ss_dssp EE
T ss_pred EE
Confidence 88
No 138
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=73.26 E-value=9.1 Score=41.23 Aligned_cols=65 Identities=14% Similarity=0.150 Sum_probs=40.8
Q ss_pred HHHHHHHCCCcEEEEE-----c----------cCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHH
Q psy15811 157 NVEALVRAGVDYLALE-----T----------IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL 221 (581)
Q Consensus 157 q~~~l~~~gvD~l~~E-----T----------~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~ 221 (581)
.++.+.++|+|+|.+- + .|.+.-+..+.+++++. ++||+.+. -..+ ..++.+.+.
T Consensus 285 ~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~-~iPVIa~G------GI~~---~~di~kala 354 (496)
T 4fxs_A 285 GARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEY-GIPVIADG------GIRF---SGDISKAIA 354 (496)
T ss_dssp HHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGG-TCCEEEES------CCCS---HHHHHHHHH
T ss_pred HHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccC-CCeEEEeC------CCCC---HHHHHHHHH
Confidence 4577888999999975 2 34454555566666654 79999732 2323 445544442
Q ss_pred hhCCCCceEEEeCC
Q psy15811 222 LANPDQIQAIGVNC 235 (581)
Q Consensus 222 ~~~~~~~~~vGvNC 235 (581)
.|+++|++-=
T Consensus 355 ----~GAd~V~iGs 364 (496)
T 4fxs_A 355 ----AGASCVMVGS 364 (496)
T ss_dssp ----TTCSEEEEST
T ss_pred ----cCCCeEEecH
Confidence 5788888764
No 139
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=73.22 E-value=3.1 Score=41.88 Aligned_cols=46 Identities=15% Similarity=0.137 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEE
Q psy15811 407 IAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFS 456 (581)
Q Consensus 407 ~~~~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft 456 (581)
.+.--+|++++.++|+|.|++|.+++..|++.+++.+. .|+++.++
T Consensus 170 ldeai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~~~----~Pl~~n~~ 215 (298)
T 3eoo_A 170 IDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEAVK----VPILANLT 215 (298)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHHC----SCBEEECC
T ss_pred HHHHHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHHcC----CCeEEEec
Confidence 44556889999999999999999999999998888873 78887765
No 140
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=73.15 E-value=22 Score=36.19 Aligned_cols=114 Identities=13% Similarity=0.200 Sum_probs=70.4
Q ss_pred CCCCHHH---HHHHHHHHHHHHHHCCCcEEEEEcc----------C-----------CH----HHHHHHHHHHHhc--CC
Q psy15811 143 DSMTEAD---LIAWHRPNVEALVRAGVDYLALETI----------P-----------AE----KEALALVKLLREF--PG 192 (581)
Q Consensus 143 ~~~~~~~---~~~~~~~q~~~l~~~gvD~l~~ET~----------~-----------~~----~E~~aa~~a~~~~--~~ 192 (581)
+++|.+| +.+.|.+-++...++|.|.|=+=-- | ++ .=+..+++++|+. ++
T Consensus 140 ~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d 219 (349)
T 3hgj_A 140 EPLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRE 219 (349)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTT
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCC
Confidence 4677654 5677888888888999998743211 1 11 1245566777754 26
Q ss_pred CcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC----------ChhhHHHHHHHHHhhCCCCceEE
Q psy15811 193 QKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV----------RPSHVSTLVRCIKQSHPTVQTIV 259 (581)
Q Consensus 193 ~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~----------~p~~~~~~l~~l~~~~~~~p~~~ 259 (581)
.||.+-++..+ ....|.++++++..+......+++.|-+-+. .|....+.++.+++. .++|++.
T Consensus 220 ~pV~vRls~~~--~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~-~~iPVi~ 293 (349)
T 3hgj_A 220 LPLFVRVSATD--WGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKR-VGLRTGA 293 (349)
T ss_dssp SCEEEEEESCC--CSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHH-HCCEEEE
T ss_pred ceEEEEecccc--ccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHH-cCceEEE
Confidence 88988887653 2345777777665443333578888887652 132344667777764 4556543
No 141
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=73.12 E-value=2.8 Score=42.01 Aligned_cols=43 Identities=23% Similarity=0.166 Sum_probs=35.4
Q ss_pred HHHHHHHHHHCCCcEEEEEc-cCCHHHHHHHHHHHHhcCCCcEEEE
Q psy15811 154 HRPNVEALVRAGVDYLALET-IPAEKEALALVKLLREFPGQKAWLS 198 (581)
Q Consensus 154 ~~~q~~~l~~~gvD~l~~ET-~~~~~E~~aa~~a~~~~~~~pv~is 198 (581)
--+++.++.++|+|.|++|. +++.+|++.+.+.+.. .+|+++.
T Consensus 168 ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~--~vP~i~n 211 (290)
T 2hjp_A 168 AVRRGQAYEEAGADAILIHSRQKTPDEILAFVKSWPG--KVPLVLV 211 (290)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCCC--SSCEEEC
T ss_pred HHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcCC--CCCEEEe
Confidence 34688999999999999999 9999999888777631 3788764
No 142
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=73.07 E-value=3.8 Score=41.16 Aligned_cols=45 Identities=16% Similarity=0.122 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHhCCCCEEEecc-cCCHHHHHHHHHHHHhcCCCeEEEE
Q psy15811 408 AWHRPNVEALVRAGVDYLALET-IPAEKEALALVKLLREFPGQKAWLS 454 (581)
Q Consensus 408 ~~~~~~~~~l~~~gvD~i~~ET-~p~~~Ea~a~~~~~~~~~~~pv~iS 454 (581)
+.-.++++++.++|+|.|++|. +|+..+++.+.+.++. .+|+++.
T Consensus 170 ~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~--~~P~i~~ 215 (295)
T 1s2w_A 170 DEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNN--QGPVVIV 215 (295)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTT--CSCEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCC--CCCEEEe
Confidence 3344788999999999999998 8999999999998863 4788755
No 143
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=72.79 E-value=25 Score=35.64 Aligned_cols=113 Identities=12% Similarity=0.158 Sum_probs=68.7
Q ss_pred CCCCHHHH---HHHHHHHHHHHHHCCCcEEEEEcc----------C---------------CHHHHHHHHHHHHhcCCCc
Q psy15811 143 DSMTEADL---IAWHRPNVEALVRAGVDYLALETI----------P---------------AEKEALALVKLLREFPGQK 194 (581)
Q Consensus 143 ~~~~~~~~---~~~~~~q~~~l~~~gvD~l~~ET~----------~---------------~~~E~~aa~~a~~~~~~~p 194 (581)
+.+|.+|+ .+.|.+-++...++|.|.|=+=-- | ...-+..+++++++..+.|
T Consensus 132 ~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~p 211 (338)
T 1z41_A 132 VEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGP 211 (338)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSC
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCc
Confidence 45776664 567888888888999999844321 1 1233456677777544889
Q ss_pred EEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC---------ChhhHHHHHHHHHhhCCCCceE
Q psy15811 195 AWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV---------RPSHVSTLVRCIKQSHPTVQTI 258 (581)
Q Consensus 195 v~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~---------~p~~~~~~l~~l~~~~~~~p~~ 258 (581)
|.+-++..+ ....|.+.++++..+......+++.|-+-.. +|....+.++.+++. .++|++
T Consensus 212 v~vris~~~--~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~-~~iPVi 281 (338)
T 1z41_A 212 LFVRVSASD--YTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQ-ADMATG 281 (338)
T ss_dssp EEEEEECCC--CSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-HCCEEE
T ss_pred EEEEecCcc--cCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHH-CCCCEE
Confidence 888877653 2335777776654443333577888776432 122234666777764 455554
No 144
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=72.78 E-value=69 Score=31.57 Aligned_cols=92 Identities=14% Similarity=0.154 Sum_probs=58.7
Q ss_pred HHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCC------CcCCCC--CcHHHHHHHHHhhCCCCceEE
Q psy15811 416 ALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDD------THTSHG--ELISSAVTSCLLANPDQIQAI 487 (581)
Q Consensus 416 ~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~------~~l~~G--~~~~~~~~~l~~~~~~~~~~i 487 (581)
.|.++|++.+-+|.-. |....++++.+ .++||+-++=+.+. +....| ...+++++..+....+++++|
T Consensus 103 rl~kaGa~aVklEdg~---e~~~~I~al~~-agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~i 178 (275)
T 1o66_A 103 ELMAAGAHMVKLEGGV---WMAETTEFLQM-RGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHDDAGAAVV 178 (275)
T ss_dssp HHHHTTCSEEEEECSG---GGHHHHHHHHH-TTCCEEEEEESCGGGTTC-----------CHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHcCCcEEEECCcH---HHHHHHHHHHH-cCCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHHHHHHcCCcEE
Confidence 3555999999999974 45555666665 69999988864321 111122 335666666655566888999
Q ss_pred EECCCCCccchHHHHHHHhhCCCCeEEEe
Q psy15811 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVY 516 (581)
Q Consensus 488 GiNC~~p~~~~~~l~~l~~~~~~~pl~~y 516 (581)
=+-|.. . .+.+++.... ++|++..
T Consensus 179 vlE~vp-~---~~a~~it~~l-~iP~igI 202 (275)
T 1o66_A 179 LMECVL-A---ELAKKVTETV-SCPTIGI 202 (275)
T ss_dssp EEESCC-H---HHHHHHHHHC-SSCEEEE
T ss_pred EEecCC-H---HHHHHHHHhC-CCCEEEE
Confidence 999964 2 3456666655 5887764
No 145
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=72.74 E-value=28 Score=33.88 Aligned_cols=102 Identities=18% Similarity=0.195 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHCC-CcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEE
Q psy15811 153 WHRPNVEALVRAG-VDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 231 (581)
Q Consensus 153 ~~~~q~~~l~~~g-vD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~v 231 (581)
.|.+.++..++.| +|++=+|-...- ..+..++.+++. +..+++|+.--+ .+++-+.+.+.+.++ ...|+|.+
T Consensus 101 ~~~~ll~~~~~~g~~d~iDvEl~~~~-~~~~l~~~~~~~-~~kvI~S~Hdf~--~tP~~~el~~~~~~~---~~~gaDiv 173 (257)
T 2yr1_A 101 EVRRLIEAICRSGAIDLVDYELAYGE-RIADVRRMTEEC-SVWLVVSRHYFD--GTPRKETLLADMRQA---ERYGADIA 173 (257)
T ss_dssp HHHHHHHHHHHHTCCSEEEEEGGGTT-HHHHHHHHHHHT-TCEEEEEEEESS--CCCCHHHHHHHHHHH---HHTTCSEE
T ss_pred HHHHHHHHHHHcCCCCEEEEECCCCh-hHHHHHHHHHhC-CCEEEEEecCCC--CCcCHHHHHHHHHHH---HhcCCCEE
Confidence 3455555666767 999999965443 666667766664 789999986431 233322333444444 35788888
Q ss_pred EeCCC--ChhhHHHHHHHHHhh--CCCCceEEec
Q psy15811 232 GVNCV--RPSHVSTLVRCIKQS--HPTVQTIVYP 261 (581)
Q Consensus 232 GvNC~--~p~~~~~~l~~l~~~--~~~~p~~~~p 261 (581)
=+-+. .+++...+++..... ..+.|++.+.
T Consensus 174 Kia~~a~s~~D~l~ll~~~~~~~~~~~~P~I~~~ 207 (257)
T 2yr1_A 174 KVAVMPKSPEDVLVLLQATEEARRELAIPLITMA 207 (257)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred EEEeccCCHHHHHHHHHHHHHHhccCCCCEEEEE
Confidence 77775 577777776544321 1567888773
No 146
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=72.40 E-value=30 Score=36.80 Aligned_cols=101 Identities=14% Similarity=0.178 Sum_probs=68.3
Q ss_pred HHHHHHHhCCCCEEEe-cccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEEC
Q psy15811 412 PNVEALVRAGVDYLAL-ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~-ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiN 490 (581)
.-++...++|+|.|-+ -..++...++.+++.+++ .++.|..++++.+... .+++.+++.+......+++.|.+-
T Consensus 104 ~~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~-~G~~v~~~i~~~~~~~----~~~e~~~~~a~~l~~~Gad~I~l~ 178 (464)
T 2nx9_A 104 TFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKK-MGAHAQGTLCYTTSPV----HNLQTWVDVAQQLAELGVDSIALK 178 (464)
T ss_dssp HHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHH-TTCEEEEEEECCCCTT----CCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHH-CCCEEEEEEEeeeCCC----CCHHHHHHHHHHHHHCCCCEEEEc
Confidence 3455566789998754 355667778888888887 5888877776544332 244444443333344567777775
Q ss_pred C----CCCccchHHHHHHHhhCCCCeEEEeeC
Q psy15811 491 C----VRPSHVSTLVRCIKQSHPTVQTIVYPN 518 (581)
Q Consensus 491 C----~~p~~~~~~l~~l~~~~~~~pl~~ypN 518 (581)
- ..|..+..+++.++... ++|+.+...
T Consensus 179 DT~G~~~P~~v~~lv~~l~~~~-~~~i~~H~H 209 (464)
T 2nx9_A 179 DMAGILTPYAAEELVSTLKKQV-DVELHLHCH 209 (464)
T ss_dssp ETTSCCCHHHHHHHHHHHHHHC-CSCEEEEEC
T ss_pred CCCCCcCHHHHHHHHHHHHHhc-CCeEEEEEC
Confidence 3 46899999999998876 688888763
No 147
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=72.35 E-value=24 Score=34.73 Aligned_cols=86 Identities=16% Similarity=0.151 Sum_probs=54.4
Q ss_pred HHHHHHhCCCCEEEe--cccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEEC
Q psy15811 413 NVEALVRAGVDYLAL--ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490 (581)
Q Consensus 413 ~~~~l~~~gvD~i~~--ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiN 490 (581)
|+......|+|.|++ .+++ ..+++..++..++ .++.+|++. .+.+++...+ + .+++.||+|
T Consensus 127 qv~~A~~~GAD~VlLi~a~l~-~~~l~~l~~~a~~-lGl~~lvev-----------~t~ee~~~A~-~---~Gad~IGv~ 189 (272)
T 3qja_A 127 QIHEARAHGADMLLLIVAALE-QSVLVSMLDRTES-LGMTALVEV-----------HTEQEADRAL-K---AGAKVIGVN 189 (272)
T ss_dssp HHHHHHHTTCSEEEEEGGGSC-HHHHHHHHHHHHH-TTCEEEEEE-----------SSHHHHHHHH-H---HTCSEEEEE
T ss_pred HHHHHHHcCCCEEEEecccCC-HHHHHHHHHHHHH-CCCcEEEEc-----------CCHHHHHHHH-H---CCCCEEEEC
Confidence 566677799999987 5666 4567777888887 599999776 2345544433 2 267899999
Q ss_pred CCCCcc---chHHHHHHHhhC-CCCeEEE
Q psy15811 491 CVRPSH---VSTLVRCIKQSH-PTVQTIV 515 (581)
Q Consensus 491 C~~p~~---~~~~l~~l~~~~-~~~pl~~ 515 (581)
...... =...++++.... .++|+++
T Consensus 190 ~r~l~~~~~dl~~~~~l~~~v~~~~pvVa 218 (272)
T 3qja_A 190 ARDLMTLDVDRDCFARIAPGLPSSVIRIA 218 (272)
T ss_dssp SBCTTTCCBCTTHHHHHGGGSCTTSEEEE
T ss_pred CCcccccccCHHHHHHHHHhCcccCEEEE
Confidence 743211 123455555442 2466665
No 148
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=72.21 E-value=27 Score=35.54 Aligned_cols=153 Identities=12% Similarity=0.143 Sum_probs=91.1
Q ss_pred CCCH---HHHHHHHHHHHHHHHhCCCCEEEeccc----------CC------------HHH---HHHHHHHHHhcC--CC
Q psy15811 400 SMTE---ADLIAWHRPNVEALVRAGVDYLALETI----------PA------------EKE---ALALVKLLREFP--GQ 449 (581)
Q Consensus 400 ~~~~---~~~~~~~~~~~~~l~~~gvD~i~~ET~----------p~------------~~E---a~a~~~~~~~~~--~~ 449 (581)
.++. +++.+.|.+.++...++|.|.|=+=-- |. ... +..+++++|+.. +.
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~ 220 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPREL 220 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 3554 566778888888889999999744221 21 122 345666666543 67
Q ss_pred eEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECCC----------CCccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 450 KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV----------RPSHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 450 pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~----------~p~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
|+.+-++..+. ...|.++++.+..+..+...+++.|-+-+. .+..-...++.+++.. ++|+++-
T Consensus 221 pV~vRls~~~~--~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~~--- 294 (349)
T 3hgj_A 221 PLFVRVSATDW--GEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV-GLRTGAV--- 294 (349)
T ss_dssp CEEEEEESCCC--STTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH-CCEEEEC---
T ss_pred eEEEEeccccc--cCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc-CceEEEE---
Confidence 88888876442 345777777766554445567787777641 1223456677777765 5887652
Q ss_pred CCCcccccccccCCcCHHHHHHHHHHHHHcC-CcEEeecCC--CchHHHHHHHHHHh
Q psy15811 520 GGVWDSVHMKWLDTEDEYSILHYVPQWLEEG-VNIIGGCCE--VTSYEIQQMRIMID 573 (581)
Q Consensus 520 g~~~~~~~~~~~~~~~~~~~~~~~~~w~~~G-~~iiGGCCG--t~P~hI~al~~~l~ 573 (581)
|..++ + +.+.+.++.| +.+|+=+=. .+|+-.+.+++.+.
T Consensus 295 Ggi~t-----------~----e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~l~ 336 (349)
T 3hgj_A 295 GLITT-----------P----EQAETLLQAGSADLVLLGRVLLRDPYFPLRAAKALG 336 (349)
T ss_dssp SSCCC-----------H----HHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHHHTT
T ss_pred CCCCC-----------H----HHHHHHHHCCCceEEEecHHHHhCchHHHHHHHHCC
Confidence 21211 1 2235566667 777664322 35777777766654
No 149
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=72.16 E-value=86 Score=31.56 Aligned_cols=185 Identities=16% Similarity=0.107 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCCCceEEec--cCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEE
Q psy15811 349 WHRPNVEALVRAGVDYLALIKPSISSQTAAS--IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 426 (581)
Q Consensus 349 l~~~av~lA~~A~~~~~~~~~~~~~v~Vags--iGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l~~~gvD~i~ 426 (581)
+..++++..+++.- ..+|... +-||-.+=+.|--- -.+.++.++..+.+.+++-...++|+|+|.
T Consensus 107 ~v~rair~iK~~~p----------dl~vitDvcLc~YT~HGHcGil~---~~g~V~ND~Tl~~L~k~Als~A~AGADiVA 173 (337)
T 1w5q_A 107 IAQRATRALRERFP----------ELGIITDVCLCEFTTHGQCGILD---DDGYVLNDVSIDVLVRQALSHAEAGAQVVA 173 (337)
T ss_dssp HHHHHHHHHHHHCT----------TSEEEEEECSTTTBTTCCSSCBC---TTSCBCHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred hHHHHHHHHHHHCC----------CeEEEEeeecccCCCCCcceeeC---CCCcCccHHHHHHHHHHHHHHHHcCCCeEe
Confidence 56777776665431 2455544 55765433332110 012377899999999999999999999999
Q ss_pred ecccCCHHHHHHHHHHHHh--cCCCeEEEEEEEcCC-------------------C-c---CCCCCcHHHHHHHHHhhCC
Q psy15811 427 LETIPAEKEALALVKLLRE--FPGQKAWLSFSCKDD-------------------T-H---TSHGELISSAVTSCLLANP 481 (581)
Q Consensus 427 ~ET~p~~~Ea~a~~~~~~~--~~~~pv~iSft~~~~-------------------~-~---l~~G~~~~~~~~~l~~~~~ 481 (581)
=-.|-+- ...++.+++.+ +.+++++ |.+.+=. | + -++--.-.++++.+.....
T Consensus 174 PSdMMDG-rV~aIR~aLd~~G~~~v~Im-sYsaKyASafYGPFRdAa~Sap~f~~GDrktYQmdpaN~~EAlrE~~~Di~ 251 (337)
T 1w5q_A 174 PSDMMDG-RIGAIREALESAGHTNVRVM-AYSAKYASAYYGPFRDAVGSASNLGKGNRATYQMDPANSDEALHEVAADLA 251 (337)
T ss_dssp ECSCCTT-HHHHHHHHHHHTTCTTCEEE-EEEEEBCCGGGHHHHHC----------CGGGTSBCTTCSHHHHHHHHHHHH
T ss_pred ccccccc-HHHHHHHHHHHCCCCCceee-hhHHHHHHHHHHHHHHHhcCCcccCCCCccccCCCCCChHHHHHHHHhhHH
Confidence 6666652 23455555554 3456644 7765510 1 0 1111112244443322223
Q ss_pred CCceEEEECCCCCccchHHHHHHHhhCCCCeEEEeeCCCC---CcccccccccCCcCHHHHHHHHHHHHHcCCcEE
Q psy15811 482 DQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGG---VWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554 (581)
Q Consensus 482 ~~~~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~ypNag~---~~~~~~~~~~~~~~~~~~~~~~~~w~~~G~~ii 554 (581)
-+++.|.|.=..| .+.+++.++... ++|+.+|--+|+ ..-....+|.+ . .-+.|....+..+|+.+|
T Consensus 252 EGAD~vMVKPal~--YLDIir~vk~~~-~~PvaaYqVSGEYAMikaAa~~GwiD-~--~~v~Esl~~~kRAGAd~I 321 (337)
T 1w5q_A 252 EGADMVMVKPGMP--YLDIVRRVKDEF-RAPTFVYQVSGEYAMHMGAIQNGWLA-E--SVILESLTAFKRAGADGI 321 (337)
T ss_dssp TTCSEEEEESCGG--GHHHHHHHHHHH-CSCEEEEECHHHHHHHHHHHHTTSSC-T--THHHHHHHHHHHHTCSEE
T ss_pred hCCCEEEEcCCCc--hHHHHHHHHHhc-CCCEEEEEcCcHHHHHHHHHHcCCcc-H--HHHHHHHHHHHhcCCCEE
Confidence 4567777765322 456677777766 799999999985 11122256876 2 246666677777787766
No 150
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=71.39 E-value=35 Score=33.79 Aligned_cols=99 Identities=14% Similarity=0.056 Sum_probs=60.3
Q ss_pred HHHHHHHCCCcEEEEEccCC---------------HHHHHHHHHHHHhcCCCcEEEEEE----EcCCCcCCCCCCHHHHH
Q psy15811 157 NVEALVRAGVDYLALETIPA---------------EKEALALVKLLREFPGQKAWLSFS----CKDDTHTSHGELISSAV 217 (581)
Q Consensus 157 q~~~l~~~gvD~l~~ET~~~---------------~~E~~aa~~a~~~~~~~pv~isft----~~~~g~l~~G~~~~~~~ 217 (581)
.++..+++|+|.+-+=.-.+ ++.++.+++.+|+. +.+|-+.++ ++..++ .+++.++
T Consensus 85 ~i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~-G~~v~~~l~~~~~~~~~~~----~~~~~~~ 159 (298)
T 2cw6_A 85 GFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSA-NISVRGYVSCALGCPYEGK----ISPAKVA 159 (298)
T ss_dssp HHHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHT-TCEEEEEEETTTCBTTTBS----CCHHHHH
T ss_pred hHHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC-CCeEEEEEEEEeeCCcCCC----CCHHHHH
Confidence 36777889999986643322 13556677777775 777766544 233333 3444444
Q ss_pred HHHHhhCCCCceEEEeCC----CChhhHHHHHHHHHhhCCCCceEEe
Q psy15811 218 TSCLLANPDQIQAIGVNC----VRPSHVSTLVRCIKQSHPTVQTIVY 260 (581)
Q Consensus 218 ~~~~~~~~~~~~~vGvNC----~~p~~~~~~l~~l~~~~~~~p~~~~ 260 (581)
+.+......|++.|.+.= ..|..+.++++.+++..++.||.+.
T Consensus 160 ~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~i~~H 206 (298)
T 2cw6_A 160 EVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVH 206 (298)
T ss_dssp HHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGGEEEE
T ss_pred HHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 333222247788776653 3599999999999986334455443
No 151
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=71.27 E-value=24 Score=33.48 Aligned_cols=49 Identities=16% Similarity=0.306 Sum_probs=33.7
Q ss_pred HHHHHHHHhCCCCEEEec-----ccCCHHHHHHHHHHHHhcCCCeEEEEEEEcC
Q psy15811 411 RPNVEALVRAGVDYLALE-----TIPAEKEALALVKLLREFPGQKAWLSFSCKD 459 (581)
Q Consensus 411 ~~~~~~l~~~gvD~i~~E-----T~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~ 459 (581)
.+.++.+.++|+|++=+- .+|........++.+++.++.|+-+++-+.+
T Consensus 22 ~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~~~~~~v~lmv~d 75 (228)
T 1h1y_A 22 AAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTN 75 (228)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSC
T ss_pred HHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhcCCcEEEEEEecC
Confidence 467888888999987444 4455333345666677666779999998755
No 152
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=71.18 E-value=49 Score=30.45 Aligned_cols=92 Identities=13% Similarity=0.137 Sum_probs=57.8
Q ss_pred HHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECCC-
Q psy15811 414 VEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV- 492 (581)
Q Consensus 414 ~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~- 492 (581)
++.+.++|+|.+++=+.+.......+++.++++ ++++.+.+.. -++..+.++.+.+. +++.|+++-.
T Consensus 70 ~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~-g~~~~v~~~~--------~~t~~~~~~~~~~~---g~d~i~v~~g~ 137 (211)
T 3f4w_A 70 SQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEA-GKQVVVDMIC--------VDDLPARVRLLEEA---GADMLAVHTGT 137 (211)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHH-TCEEEEECTT--------CSSHHHHHHHHHHH---TCCEEEEECCH
T ss_pred HHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHc-CCeEEEEecC--------CCCHHHHHHHHHHc---CCCEEEEcCCC
Confidence 777888999999998888766668888888884 7888765311 12333444444222 4566777631
Q ss_pred ----CCccchHHHHHHHhhCCCCeEEEee
Q psy15811 493 ----RPSHVSTLVRCIKQSHPTVQTIVYP 517 (581)
Q Consensus 493 ----~p~~~~~~l~~l~~~~~~~pl~~yp 517 (581)
.+......+++++....+.|+++-.
T Consensus 138 ~g~~~~~~~~~~i~~l~~~~~~~~i~~~g 166 (211)
T 3f4w_A 138 DQQAAGRKPIDDLITMLKVRRKARIAVAG 166 (211)
T ss_dssp HHHHTTCCSHHHHHHHHHHCSSCEEEEES
T ss_pred cccccCCCCHHHHHHHHHHcCCCcEEEEC
Confidence 0112456778887763357876633
No 153
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=71.16 E-value=32 Score=33.06 Aligned_cols=103 Identities=9% Similarity=0.110 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHC-CCcEEEEEccC--CHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCce
Q psy15811 153 WHRPNVEALVRA-GVDYLALETIP--AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ 229 (581)
Q Consensus 153 ~~~~q~~~l~~~-gvD~l~~ET~~--~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~ 229 (581)
.|.+.++..++. ++|++=+|-.. .-+..+..++.+++. +..+++|+.--+ .+++ .++....+.++...|+|
T Consensus 84 ~~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~~~l~~~~~~~-~~kvI~S~Hdf~--~tp~---~~el~~~~~~~~~~gaD 157 (238)
T 1sfl_A 84 SYLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQY-NKEVIISHHNFE--STPP---LDELQFIFFKMQKFNPE 157 (238)
T ss_dssp HHHHHHHHGGGCTTCCEEEEECCTTSCHHHHHHHHHHHHHT-TCEEEEEEEESS--CCCC---HHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHHhCCCCEEEEEccCCCChHHHHHHHHHHHhc-CCEEEEEecCCC--CCcC---HHHHHHHHHHHHHcCCC
Confidence 455555666665 79999999876 666667777777764 788999986432 2333 33333333334468888
Q ss_pred EEEeCCC--ChhhHHHHHHHHHhh--CCCCceEEec
Q psy15811 230 AIGVNCV--RPSHVSTLVRCIKQS--HPTVQTIVYP 261 (581)
Q Consensus 230 ~vGvNC~--~p~~~~~~l~~l~~~--~~~~p~~~~p 261 (581)
.+=+-+. .+++...+++..... ..+.|++.+.
T Consensus 158 ivKia~~a~~~~D~l~ll~~~~~~~~~~~~P~I~~~ 193 (238)
T 1sfl_A 158 YVKLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGIS 193 (238)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHHHHHHCSSEEEEEE
T ss_pred EEEEEecCCCHHHHHHHHHHHHHHhhcCCCCEEEEE
Confidence 8888775 577777766544321 1568888773
No 154
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=71.10 E-value=21 Score=34.38 Aligned_cols=104 Identities=9% Similarity=0.052 Sum_probs=63.3
Q ss_pred HHHHHHHHHhC-CCCEEEecccC--CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceE
Q psy15811 410 HRPNVEALVRA-GVDYLALETIP--AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQA 486 (581)
Q Consensus 410 ~~~~~~~l~~~-gvD~i~~ET~p--~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~ 486 (581)
|.+.++...+. ++|+|=+|-.. .....+.+++..++ .+..+++|+.- -..+++-+.+.+.+..+ ...+++.
T Consensus 85 ~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~~~l~~~~~~-~~~kvI~S~Hd--f~~tp~~~el~~~~~~~---~~~gaDi 158 (238)
T 1sfl_A 85 YLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQ-YNKEVIISHHN--FESTPPLDELQFIFFKM---QKFNPEY 158 (238)
T ss_dssp HHHHHHHGGGCTTCCEEEEECCTTSCHHHHHHHHHHHHH-TTCEEEEEEEE--SSCCCCHHHHHHHHHHH---HTTCCSE
T ss_pred HHHHHHHHHHhCCCCEEEEEccCCCChHHHHHHHHHHHh-cCCEEEEEecC--CCCCcCHHHHHHHHHHH---HHcCCCE
Confidence 34444445555 69999999876 55556677777776 58899999953 22334433344555555 3446566
Q ss_pred EEECC--CCCccchHHHHHHHhh--CCCCeEEEeeCC
Q psy15811 487 IGVNC--VRPSHVSTLVRCIKQS--HPTVQTIVYPNK 519 (581)
Q Consensus 487 iGiNC--~~p~~~~~~l~~l~~~--~~~~pl~~ypNa 519 (581)
+=|-+ .+++++..+++..... ..+.|++.+.-+
T Consensus 159 vKia~~a~~~~D~l~ll~~~~~~~~~~~~P~I~~~MG 195 (238)
T 1sfl_A 159 VKLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMS 195 (238)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHCSSEEEEEECT
T ss_pred EEEEecCCCHHHHHHHHHHHHHHhhcCCCCEEEEECC
Confidence 55555 3556666666543321 126899988754
No 155
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=70.89 E-value=39 Score=33.54 Aligned_cols=100 Identities=11% Similarity=0.041 Sum_probs=61.8
Q ss_pred HHHHHHHCCCcEEEEEccC-C--------------HHHHHHHHHHHHhcCCCcEEEEEEE----cCCCcCCCCCCHHHHH
Q psy15811 157 NVEALVRAGVDYLALETIP-A--------------EKEALALVKLLREFPGQKAWLSFSC----KDDTHTSHGELISSAV 217 (581)
Q Consensus 157 q~~~l~~~gvD~l~~ET~~-~--------------~~E~~aa~~a~~~~~~~pv~isft~----~~~g~l~~G~~~~~~~ 217 (581)
.++..+++|+|.+-+-.-. + ++.++.+++.+++. +..|-..+.. +..+ -.+++.++
T Consensus 88 ~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~-G~~V~~~l~~~~~~e~~~----~~~~~~~~ 162 (302)
T 2ftp_A 88 GFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQH-QVRVRGYISCVLGCPYDG----DVDPRQVA 162 (302)
T ss_dssp HHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHT-TCEEEEEEECTTCBTTTB----CCCHHHHH
T ss_pred HHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC-CCeEEEEEEEEeeCCcCC----CCCHHHHH
Confidence 4566778999998763222 2 24456667777775 6766544432 2222 24566555
Q ss_pred HHHHhhCCCCceEEEeCC----CChhhHHHHHHHHHhhCCCCceEEec
Q psy15811 218 TSCLLANPDQIQAIGVNC----VRPSHVSTLVRCIKQSHPTVQTIVYP 261 (581)
Q Consensus 218 ~~~~~~~~~~~~~vGvNC----~~p~~~~~~l~~l~~~~~~~p~~~~p 261 (581)
+.+......|++.|.+-= ..|..+.++++.+++..+++||.+..
T Consensus 163 ~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~~H~ 210 (302)
T 2ftp_A 163 WVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGHF 210 (302)
T ss_dssp HHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEEEEE
T ss_pred HHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 544322246777665542 35999999999999863357888776
No 156
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=70.47 E-value=29 Score=37.01 Aligned_cols=68 Identities=18% Similarity=0.276 Sum_probs=46.7
Q ss_pred HHHHHHHHHHCCCcEEEEEcc-CCHHHHHHHHHHHHhc-CCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEE
Q psy15811 154 HRPNVEALVRAGVDYLALETI-PAEKEALALVKLLREF-PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 231 (581)
Q Consensus 154 ~~~q~~~l~~~gvD~l~~ET~-~~~~E~~aa~~a~~~~-~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~v 231 (581)
+.++++.++++|+|.|.+-+. .+.......++.+++. +++||++- .+.+.+++ ..+. ..|+++|
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g----------~~~t~e~a-~~l~---~~G~d~I 303 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAG----------NVATPEGT-EALI---KAGADAV 303 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEE----------EECSHHHH-HHHH---HTTCSEE
T ss_pred HHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeC----------CcCCHHHH-HHHH---HcCCCEE
Confidence 456899999999999988543 3445566677777754 47898762 24566666 3444 3688888
Q ss_pred EeCC
Q psy15811 232 GVNC 235 (581)
Q Consensus 232 GvNC 235 (581)
-+..
T Consensus 304 ~v~~ 307 (494)
T 1vrd_A 304 KVGV 307 (494)
T ss_dssp EECS
T ss_pred EEcC
Confidence 8744
No 157
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=70.45 E-value=86 Score=30.91 Aligned_cols=170 Identities=11% Similarity=0.138 Sum_probs=96.0
Q ss_pred CceEEeccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc---cCC------HHHHHHHHHHH
Q psy15811 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET---IPA------EKEALALVKLL 443 (581)
Q Consensus 373 ~v~VagsiGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l~~~gvD~i~~ET---~p~------~~Ea~a~~~~~ 443 (581)
+..|.|=+-++++.+++|..| .+.+++. ++++.+.+.|+|+|=+-- -|. .+|...++..+
T Consensus 14 ~~~imGilN~TpdSFsdgg~~-------~~~~~a~----~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi 82 (282)
T 1aj0_A 14 HPHVMGILNVTPDSFSDGGTH-------NSLIDAV----KHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVV 82 (282)
T ss_dssp SCEEEEEEECCTTTSCCCCCC-------THHHHHH----HHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCcccccccc-------CCHHHHH----HHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHH
Confidence 457888899999988887543 2344443 566667778999974443 244 67776655555
Q ss_pred H---hcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECCCCCccchHHHHHHHhhCCCCeEEEeeCCC
Q psy15811 444 R---EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 520 (581)
Q Consensus 444 ~---~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~ypNag 520 (581)
+ +..++| +|+-. ... +++++..+. ++. -||-++-.....+++.++.. +.|+++.++.|
T Consensus 83 ~~l~~~~~~p--iSIDT---------~~~-~va~aAl~a---Ga~--iINdvsg~~d~~~~~~~a~~--~~~vVlmh~~G 143 (282)
T 1aj0_A 83 EAIAQRFEVW--ISVDT---------SKP-EVIRESAKV---GAH--IINDIRSLSEPGALEAAAET--GLPVCLMHMQG 143 (282)
T ss_dssp HHHHHHCCCE--EEEEC---------CCH-HHHHHHHHT---TCC--EEEETTTTCSTTHHHHHHHH--TCCEEEECCSS
T ss_pred HHHHhhcCCe--EEEeC---------CCH-HHHHHHHHc---CCC--EEEECCCCCCHHHHHHHHHh--CCeEEEEccCC
Confidence 5 323555 45521 112 333333212 444 46664322444555556665 58999999987
Q ss_pred CCcccccccccCCcC-----HHHHHHHHHHHHHcCCc---EE---e-ecCCCchHHHHHHHHHHhcc
Q psy15811 521 GVWDSVHMKWLDTED-----EYSILHYVPQWLEEGVN---II---G-GCCEVTSYEIQQMRIMIDEF 575 (581)
Q Consensus 521 ~~~~~~~~~~~~~~~-----~~~~~~~~~~w~~~G~~---ii---G-GCCGt~P~hI~al~~~l~~~ 575 (581)
.+.+..... .|. + .+.+.+.+....+.|+. || | |- +.+.+|--++-+.++.+
T Consensus 144 ~p~tm~~~~-~y~-d~~~ev~~~l~~~i~~a~~~Gi~~~~IilDPg~gf-~k~~~~n~~ll~~l~~~ 207 (282)
T 1aj0_A 144 NPKTMQEAP-KYD-DVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGF-GKNLSHNYSLLARLAEF 207 (282)
T ss_dssp CTTCCSCCC-CCS-CHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTS-SCCHHHHHHHHHTGGGG
T ss_pred CCccccccC-ccc-hHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCCc-ccCHHHHHHHHHHHHHH
Confidence 654322110 111 2 23455666777788985 54 2 22 66777666555555543
No 158
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=70.37 E-value=30 Score=37.63 Aligned_cols=102 Identities=11% Similarity=0.128 Sum_probs=67.4
Q ss_pred HHHHHHHhCCCCEEE-ecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEEC
Q psy15811 412 PNVEALVRAGVDYLA-LETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~-~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiN 490 (581)
.-++.+.++|+|.|- |-..++...++.+++.+++ .++.+-.+|++.+.. ..+++.+++.+......+++.|.+-
T Consensus 121 ~~ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~-~G~~v~~~i~~~~~~----~~~~e~~~~~a~~l~~~Gad~I~L~ 195 (539)
T 1rqb_A 121 RFVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKK-AGKHAQGTICYTISP----VHTVEGYVKLAGQLLDMGADSIALK 195 (539)
T ss_dssp HHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHH-TTCEEEEEEECCCST----TCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHH-CCCeEEEEEEeeeCC----CCCHHHHHHHHHHHHHcCCCEEEeC
Confidence 345556678999875 4455567788888888887 588887777664432 2244444443333334566777765
Q ss_pred C----CCCccchHHHHHHHhhCC-CCeEEEeeC
Q psy15811 491 C----VRPSHVSTLVRCIKQSHP-TVQTIVYPN 518 (581)
Q Consensus 491 C----~~p~~~~~~l~~l~~~~~-~~pl~~ypN 518 (581)
- ..|..+..+++.++...+ ++|+.+...
T Consensus 196 DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~H~H 228 (539)
T 1rqb_A 196 DMAALLKPQPAYDIIKAIKDTYGQKTQINLHCH 228 (539)
T ss_dssp ETTCCCCHHHHHHHHHHHHHHHCTTCCEEEEEB
T ss_pred CCCCCcCHHHHHHHHHHHHHhcCCCceEEEEeC
Confidence 3 468899999999987643 578888774
No 159
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=70.03 E-value=27 Score=34.98 Aligned_cols=132 Identities=19% Similarity=0.221 Sum_probs=76.2
Q ss_pred HHHHHhccccccccccccccccH-hhcCCCHHHHHHHHHHHHHHHHHHhhhhcCCCcccccccccccCCCeEEEeecCCc
Q psy15811 49 RDFIRAGADIIQSSCYQANVDNL-TKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPY 127 (581)
Q Consensus 49 ~~yl~AGAdiI~TnTf~a~~~~l-~~~g~~~~~~~~i~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~~~~~VagsiGP~ 127 (581)
+.-+++|+++|.... .+|.... ..++.+.++..+..+..++.|++.- ..|-+.+.-.
T Consensus 88 ~~a~~~g~~~v~i~~-~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G---------------------~~v~~~i~~~ 145 (307)
T 1ydo_A 88 ENALEGGINEACVFM-SASETHNRKNINKSTSESLHILKQVNNDAQKAN---------------------LTTRAYLSTV 145 (307)
T ss_dssp HHHHHHTCSEEEEEE-ESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTT---------------------CEEEEEEECT
T ss_pred HHHHhCCcCEEEEEe-ecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC---------------------CEEEEEEEEE
Confidence 345678999876542 3333221 2356676776666677777766542 1233332221
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEEE-ccC--CHHHHHHHHHHHHhc-CCCcEEEEEEEcC
Q psy15811 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE-TIP--AEKEALALVKLLREF-PGQKAWLSFSCKD 203 (581)
Q Consensus 128 g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~E-T~~--~~~E~~aa~~a~~~~-~~~pv~isft~~~ 203 (581)
- +.||.+ ..+.+ ++.+.++.+.+.|+|.|-+= |+. ...++...++.+++. +++| ++|-+=+
T Consensus 146 ~-----~~~~~~----~~~~~----~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~--l~~H~Hn 210 (307)
T 1ydo_A 146 F-----GCPYEK----DVPIE----QVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFPANQ--IALHFHD 210 (307)
T ss_dssp T-----CBTTTB----CCCHH----HHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTTSCGGG--EEEECBG
T ss_pred e-----cCCcCC----CCCHH----HHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCCCCe--EEEEECC
Confidence 0 111222 34454 55666677788899988554 543 788889999999853 2344 5665543
Q ss_pred CCcCCCCCCHHHHHHHHH
Q psy15811 204 DTHTSHGELISSAVTSCL 221 (581)
Q Consensus 204 ~g~l~~G~~~~~~~~~~~ 221 (581)
+ .|..+..++.++.
T Consensus 211 d----~Gla~AN~laAv~ 224 (307)
T 1ydo_A 211 T----RGTALANMVTALQ 224 (307)
T ss_dssp G----GSCHHHHHHHHHH
T ss_pred C----CchHHHHHHHHHH
Confidence 3 5777777776664
No 160
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=69.82 E-value=3.2 Score=41.92 Aligned_cols=45 Identities=18% Similarity=0.165 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEE
Q psy15811 408 AWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFS 456 (581)
Q Consensus 408 ~~~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft 456 (581)
+.--++++++.++|+|.|++|.+|+..|++.+.+.+ ++|+++.++
T Consensus 175 ~~ai~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~----~~P~~~n~~ 219 (305)
T 3ih1_A 175 DEAIERANAYVKAGADAIFPEALQSEEEFRLFNSKV----NAPLLANMT 219 (305)
T ss_dssp HHHHHHHHHHHHHTCSEEEETTCCSHHHHHHHHHHS----CSCBEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHc----CCCEEEeec
Confidence 344588899999999999999999999988877765 478876653
No 161
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=69.54 E-value=81 Score=30.96 Aligned_cols=164 Identities=17% Similarity=0.193 Sum_probs=83.6
Q ss_pred CceEEeccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEe---------cccCCHHHHHHHHHHH
Q psy15811 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL---------ETIPAEKEALALVKLL 443 (581)
Q Consensus 373 ~v~VagsiGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l~~~gvD~i~~---------ET~p~~~Ea~a~~~~~ 443 (581)
+..|.|=+-=+++.|.+|..|. +.+. -..+++.+.+.|+|+|=+ +.++.-+|..-++-.+
T Consensus 6 r~~iMGIlNvTPDSFsDGG~~~-------~~~~----a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi 74 (270)
T 4hb7_A 6 KTKIMGILNVTPDSFSDGGKFN-------NVET----AINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVV 74 (270)
T ss_dssp CCEEEEEEECC----------C-------HHHH----HHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCCCCCCCCC-------CHHH----HHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHH
Confidence 3578888888888888875442 2332 346777788899999855 3455566766666666
Q ss_pred HhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECCC-CCccchHHHHHHHhhCCCCeEEEeeCCCCC
Q psy15811 444 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV-RPSHVSTLVRCIKQSHPTVQTIVYPNKGGV 522 (581)
Q Consensus 444 ~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~-~p~~~~~~l~~l~~~~~~~pl~~ypNag~~ 522 (581)
+......+.+|+-- .. .+++++..+. ++. -||-+ +-..=..+++.++.. +.|++++-+.|.+
T Consensus 75 ~~l~~~~v~iSIDT------~~----~~Va~~al~a---Ga~--iINDVs~g~~d~~m~~~va~~--~~~~vlMH~~~~p 137 (270)
T 4hb7_A 75 EAIVGFDVKISVDT------FR----SEVAEACLKL---GVD--MINDQWAGLYDHRMFQIVAKY--DAEIILMHNGNGN 137 (270)
T ss_dssp HHHTTSSSEEEEEC------SC----HHHHHHHHHH---TCC--EEEETTTTSSCTHHHHHHHHT--TCEEEEECCCSSC
T ss_pred HHhhcCCCeEEEEC------CC----HHHHHHHHHh---ccc--eeccccccccchhHHHHHHHc--CCCeEEeccccCC
Confidence 64433456677721 11 2333433222 445 46753 222223444555554 5899998877644
Q ss_pred cccccccccCCcCHHHHHHHHHHHHHcCC---cEE---eecCCCchHHHHHH
Q psy15811 523 WDSVHMKWLDTEDEYSILHYVPQWLEEGV---NII---GGCCEVTSYEIQQM 568 (581)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~w~~~G~---~ii---GGCCGt~P~hI~al 568 (581)
...+ .. ..-..++.+.+....+.|+ +|| |=--|-|++|=-+|
T Consensus 138 ~~~~--vv--~ev~~~l~~~i~~a~~aGI~~~~IilDPGiGFgKt~~~N~~l 185 (270)
T 4hb7_A 138 RDEP--VV--EEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAKTRNEEAEV 185 (270)
T ss_dssp CSSC--HH--HHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHH
T ss_pred cccc--ch--hHHHHHHHHHHHHHHHcCCCCceEEEeCCCCcccccccHHHH
Confidence 3211 00 0002345566667777887 343 33345666664444
No 162
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=69.53 E-value=60 Score=32.71 Aligned_cols=42 Identities=19% Similarity=0.279 Sum_probs=34.6
Q ss_pred cCHHHHHHHHHHHHHcCCcEEeecCC----CchHHHHHHHHHHhcc
Q psy15811 534 EDEYSILHYVPQWLEEGVNIIGGCCE----VTSYEIQQMRIMIDEF 575 (581)
Q Consensus 534 ~~~~~~~~~~~~w~~~G~~iiGGCCG----t~P~hI~al~~~l~~~ 575 (581)
.++++..+.+++.++.|--|++--|| |.|++|+++-++++++
T Consensus 301 g~~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey 346 (348)
T 4ay7_A 301 GPVDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEF 346 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHh
Confidence 45788999999999988888886666 5679999999998865
No 163
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=69.35 E-value=3.6 Score=41.22 Aligned_cols=45 Identities=22% Similarity=0.099 Sum_probs=36.3
Q ss_pred HHHHHHHHHHhCCCCEEEecc-cCCHHHHHHHHHHHHhcCCCeEEEEE
Q psy15811 409 WHRPNVEALVRAGVDYLALET-IPAEKEALALVKLLREFPGQKAWLSF 455 (581)
Q Consensus 409 ~~~~~~~~l~~~gvD~i~~ET-~p~~~Ea~a~~~~~~~~~~~pv~iSf 455 (581)
.-.++++++.++|+|.|++|. +|+..|++.+.+.+.. .+|+++.+
T Consensus 167 ~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~--~vP~i~n~ 212 (290)
T 2hjp_A 167 EAVRRGQAYEEAGADAILIHSRQKTPDEILAFVKSWPG--KVPLVLVP 212 (290)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCCC--SSCEEECG
T ss_pred HHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcCC--CCCEEEec
Confidence 334788999999999999999 9999999888877642 47877643
No 164
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=69.30 E-value=11 Score=38.72 Aligned_cols=62 Identities=11% Similarity=0.027 Sum_probs=40.5
Q ss_pred CCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCce-EEEeCCCC------------hhhHHHHHHHHHhhCCCCce
Q psy15811 191 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ-AIGVNCVR------------PSHVSTLVRCIKQSHPTVQT 257 (581)
Q Consensus 191 ~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~-~vGvNC~~------------p~~~~~~l~~l~~~~~~~p~ 257 (581)
.+.|+++|+. |.++++.++.+......+.+ +|=|||++ |+.+.++++.+++. .++||
T Consensus 127 ~~~pvivsI~---------g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~-~~~PV 196 (345)
T 3oix_A 127 DSKNHFLSLV---------GMSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTY-FTKPL 196 (345)
T ss_dssp TCCCCEEEEC---------CSSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTT-CCSCE
T ss_pred CCCCEEEEec---------CCCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHH-hCCCe
Confidence 4789999883 45566555443322123444 99999863 45677788888775 67888
Q ss_pred EEecC
Q psy15811 258 IVYPN 262 (581)
Q Consensus 258 ~~~pn 262 (581)
+++..
T Consensus 197 ~vKi~ 201 (345)
T 3oix_A 197 GIKLP 201 (345)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 87743
No 165
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=68.97 E-value=58 Score=32.84 Aligned_cols=142 Identities=6% Similarity=0.020 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCEE-EecccC---C--------HHHHHHHHHHHHhc-CCCeEEEEEEEcCCCcCCCCCcHH
Q psy15811 404 ADLIAWHRPNVEALVRAGVDYL-ALETIP---A--------EKEALALVKLLREF-PGQKAWLSFSCKDDTHTSHGELIS 470 (581)
Q Consensus 404 ~~~~~~~~~~~~~l~~~gvD~i-~~ET~p---~--------~~Ea~a~~~~~~~~-~~~pv~iSft~~~~~~l~~G~~~~ 470 (581)
+.+.+.+.+-++.+.++|+|.| ++++.. + ..-.+.+++.+++. +++|+ ++|| .....+.
T Consensus 189 ~~l~~~~~~~~~~~~~aGad~iqi~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~~~~~~~-ih~c-~g~~~~l------ 260 (353)
T 1j93_A 189 QKFATSMAKYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLTHPNLPL-ILYA-SGSGGLL------ 260 (353)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEECGGGGGSCHHHHHHHTHHHHHHHHHHHHHHSTTCCE-EEEC-SSCTTTG------
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeCcccccCCHHHHHHHhHHHHHHHHHHHHHhCCCCCE-EEEC-CChHHHH------
Confidence 3445556666777778999976 456542 2 22234455566543 26786 4774 3332221
Q ss_pred HHHHHHHhhCCCCceEEEECCCCCccchHHHHHHHh-hCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHHHc
Q psy15811 471 SAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ-SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEE 549 (581)
Q Consensus 471 ~~~~~l~~~~~~~~~~iGiNC~~p~~~~~~l~~l~~-~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 549 (581)
..+ ...+++++++.... .+. .++. .+ .-+.+.-|--. . .. ..+++...+.+++.++.
T Consensus 261 ---~~l---~~~g~d~~~~d~~~--d~~----~~~~~~g--~~~~l~Gnldp----~---~l-~~~~e~i~~~v~~~l~~ 318 (353)
T 1j93_A 261 ---ERL---PLTGVDVVSLDWTV--DMA----DGRRRLG--PNVAIQGNVDP----G---VL-FGSKEFITNRINDTVKK 318 (353)
T ss_dssp ---GGG---GGGCCSEEECCTTS--CHH----HHHHHTC--SSSEEECCBCG----G---GG-GSCHHHHHHHHHHHHHH
T ss_pred ---HHH---HhcCCCEEEeCCCC--CHH----HHHHHcC--CCeEEEecCCH----H---HH-cCCHHHHHHHHHHHHHH
Confidence 233 23467777776521 122 2222 22 12445555421 1 11 24578888888888764
Q ss_pred -CC--cEEeecCC----CchHHHHHHHHHHhcc
Q psy15811 550 -GV--NIIGGCCE----VTSYEIQQMRIMIDEF 575 (581)
Q Consensus 550 -G~--~iiGGCCG----t~P~hI~al~~~l~~~ 575 (581)
|. -|++=-|| |.|++++++.+.++++
T Consensus 319 ~~~~g~I~~~g~gi~~~~~~enl~a~ve~v~~~ 351 (353)
T 1j93_A 319 AGKGKHILNLGHGIKVGTPEENFAHFFEIAKGL 351 (353)
T ss_dssp HCSSSEEBCBSSCCCTTCCHHHHHHHHHHHHTC
T ss_pred hCCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 43 56776676 5889999999988764
No 166
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=68.49 E-value=6.8 Score=38.87 Aligned_cols=42 Identities=19% Similarity=0.073 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEE
Q psy15811 151 IAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAW 196 (581)
Q Consensus 151 ~~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~ 196 (581)
.+.--++++++.++|+|.|++|.+++.+|++.+.+.+ +.|+-
T Consensus 167 ~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~----~~P~n 208 (275)
T 2ze3_A 167 LAETVRRGQAYADAGADGIFVPLALQSQDIRALADAL----RVPLN 208 (275)
T ss_dssp HHHHHHHHHHHHHTTCSEEECTTCCCHHHHHHHHHHC----SSCEE
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhc----CCCEE
Confidence 3455678899999999999999999999998887765 46764
No 167
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=67.95 E-value=7.9 Score=38.40 Aligned_cols=42 Identities=19% Similarity=0.084 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeE
Q psy15811 406 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKA 451 (581)
Q Consensus 406 ~~~~~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv 451 (581)
-.+.-.++++++.++|+|.|++|.+|+..+++.+.+.+ ++|+
T Consensus 166 ~~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~----~~P~ 207 (275)
T 2ze3_A 166 RLAETVRRGQAYADAGADGIFVPLALQSQDIRALADAL----RVPL 207 (275)
T ss_dssp HHHHHHHHHHHHHHTTCSEEECTTCCCHHHHHHHHHHC----SSCE
T ss_pred hHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhc----CCCE
Confidence 34556678899999999999999999999998887765 4675
No 168
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=67.61 E-value=82 Score=29.52 Aligned_cols=95 Identities=14% Similarity=0.154 Sum_probs=55.3
Q ss_pred HHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcC--CCcCCCCCcHHHHHHHHHhhCCCCceEEE
Q psy15811 411 RPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKD--DTHTSHGELISSAVTSCLLANPDQIQAIG 488 (581)
Q Consensus 411 ~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~--~~~l~~G~~~~~~~~~l~~~~~~~~~~iG 488 (581)
.+.++.+.++|++.|-+-+ . ..++.+++..++|+ +.+...+ +.++..+.+..++-..+ ..+++.|-
T Consensus 39 ~~~a~~~~~~G~~~i~~~~---~----~~i~~i~~~~~~p~-i~~~~~~~~~~~~~i~~~~~~i~~~~----~~Gad~V~ 106 (234)
T 1yxy_A 39 PLMAKAAQEAGAVGIRANS---V----RDIKEIQAITDLPI-IGIIKKDYPPQEPFITATMTEVDQLA----ALNIAVIA 106 (234)
T ss_dssp HHHHHHHHHHTCSEEEEES---H----HHHHHHHTTCCSCE-EEECBCCCTTSCCCBSCSHHHHHHHH----TTTCSEEE
T ss_pred HHHHHHHHHCCCcEeecCC---H----HHHHHHHHhCCCCE-EeeEcCCCCccccccCChHHHHHHHH----HcCCCEEE
Confidence 3677778888999987642 2 33667776678997 3332222 34444444555443333 33556665
Q ss_pred ECCC---CC--ccchHHHHHHHhhCCCCeEEEee
Q psy15811 489 VNCV---RP--SHVSTLVRCIKQSHPTVQTIVYP 517 (581)
Q Consensus 489 iNC~---~p--~~~~~~l~~l~~~~~~~pl~~yp 517 (581)
+... .| ..+..+++.++...++.++++-+
T Consensus 107 l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~ 140 (234)
T 1yxy_A 107 MDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADI 140 (234)
T ss_dssp EECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEEC
T ss_pred EcccccCCCCCccHHHHHHHHHHhCCCCeEEEeC
Confidence 5552 34 35667788887764356666544
No 169
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=67.59 E-value=42 Score=32.23 Aligned_cols=102 Identities=13% Similarity=0.095 Sum_probs=63.5
Q ss_pred HHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECC
Q psy15811 412 PNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 491 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC 491 (581)
++++...++|+|+|.. |... ..++++.++ .++|+++.+ .+++++.+++ ..+++.|.+-=
T Consensus 97 ~~a~~Ai~AGA~fIvs---P~~~--~~vi~~~~~-~gi~~ipGv-----------~TptEi~~A~----~~Gad~vK~FP 155 (232)
T 4e38_A 97 EQALAAKEAGATFVVS---PGFN--PNTVRACQE-IGIDIVPGV-----------NNPSTVEAAL----EMGLTTLKFFP 155 (232)
T ss_dssp HHHHHHHHHTCSEEEC---SSCC--HHHHHHHHH-HTCEEECEE-----------CSHHHHHHHH----HTTCCEEEECS
T ss_pred HHHHHHHHcCCCEEEe---CCCC--HHHHHHHHH-cCCCEEcCC-----------CCHHHHHHHH----HcCCCEEEECc
Confidence 7888999999999984 4422 334555666 489998764 2677887776 23567777732
Q ss_pred CCCccchHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHHHcCCcE
Q psy15811 492 VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNI 553 (581)
Q Consensus 492 ~~p~~~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~~G~~i 553 (581)
..+..=...||.++.-.+++|++ |-.|-.. +.+.+|++.|+..
T Consensus 156 a~~~gG~~~lkal~~p~p~ip~~--ptGGI~~-----------------~n~~~~l~aGa~~ 198 (232)
T 4e38_A 156 AEASGGISMVKSLVGPYGDIRLM--PTGGITP-----------------SNIDNYLAIPQVL 198 (232)
T ss_dssp TTTTTHHHHHHHHHTTCTTCEEE--EBSSCCT-----------------TTHHHHHTSTTBC
T ss_pred CccccCHHHHHHHHHHhcCCCee--eEcCCCH-----------------HHHHHHHHCCCeE
Confidence 22211146788887643356654 5544211 1247899999644
No 170
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=67.52 E-value=23 Score=34.60 Aligned_cols=108 Identities=13% Similarity=0.082 Sum_probs=64.6
Q ss_pred CCHHHHHHHHHHHHHHHHhCC-CCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhh
Q psy15811 401 MTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 479 (581)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~~g-vD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~ 479 (581)
.+.++..+.++ .+.+.+ +|+|=+|-.....-...+++..++ .+..+++|+.- -..+++-+.+.+.+..+.
T Consensus 96 ~~~~~~~~ll~----~~~~~~~~d~iDvEl~~~~~~~~~l~~~a~~-~~~kiI~S~Hd--f~~TP~~~el~~~~~~~~-- 166 (258)
T 4h3d_A 96 ISRDYYTTLNK----EISNTGLVDLIDVELFMGDEVIDEVVNFAHK-KEVKVIISNHD--FNKTPKKEEIVSRLCRMQ-- 166 (258)
T ss_dssp CCHHHHHHHHH----HHHHTTCCSEEEEEGGGCHHHHHHHHHHHHH-TTCEEEEEEEE--SSCCCCHHHHHHHHHHHH--
T ss_pred CCHHHHHHHHH----HHHhcCCchhhHHhhhccHHHHHHHHHHHHh-CCCEEEEEEec--CCCCCCHHHHHHHHHHHH--
Confidence 45554444443 344444 999999987766656677777776 68999999953 233444444555555552
Q ss_pred CCCCceEEEECC--CCCccchHHHHHH---HhhCCCCeEEEeeC
Q psy15811 480 NPDQIQAIGVNC--VRPSHVSTLVRCI---KQSHPTVQTIVYPN 518 (581)
Q Consensus 480 ~~~~~~~iGiNC--~~p~~~~~~l~~l---~~~~~~~pl~~ypN 518 (581)
..+++.+=|-+ .+++++..+++.. +....+.|++.+.-
T Consensus 167 -~~gaDIvKia~~~~~~~D~l~Ll~~~~~~~~~~~~~P~I~~~M 209 (258)
T 4h3d_A 167 -ELGADLPKIAVMPQNEKDVLVLLEATNEMFKIYADRPIITMSM 209 (258)
T ss_dssp -HTTCSEEEEEECCSSHHHHHHHHHHHHHHHHHTCSSCBEEEEC
T ss_pred -HhCCCEEEEEEccCCHHHHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 33555555544 3556666666543 33333688887654
No 171
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=67.51 E-value=8.8 Score=38.06 Aligned_cols=101 Identities=17% Similarity=0.131 Sum_probs=68.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCcEEEE-----Ec-cCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHH
Q psy15811 143 DSMTEADLIAWHRPNVEALVRAGVDYLAL-----ET-IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSA 216 (581)
Q Consensus 143 ~~~~~~~~~~~~~~q~~~l~~~gvD~l~~-----ET-~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~ 216 (581)
+.++++. +++.++.+++. ||.|++ |. .-+.+|=+.+++.+.+ .+||++.. .+.+..++
T Consensus 14 g~iD~~~----l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~--rvpviaGv---------g~~~t~~a 77 (283)
T 2pcq_A 14 GRLDEEA----FRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP--RKPFLVGL---------MEETLPQA 77 (283)
T ss_dssp CCBCHHH----HHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC--SSCCEEEE---------CCSSHHHH
T ss_pred CCcCHHH----HHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh--CCcEEEeC---------CCCCHHHH
Confidence 3567654 45677777888 998765 43 2367788888888776 78988754 23455667
Q ss_pred HHHHHhhCCCCceEEEeCCC---Ch---hhHHHHHHHHHhhCCCCceEEecC
Q psy15811 217 VTSCLLANPDQIQAIGVNCV---RP---SHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 217 ~~~~~~~~~~~~~~vGvNC~---~p---~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
++.+..+...|++++.+-.- .| +.+....+.+.. ++|+++|-+
T Consensus 78 i~la~~A~~~Gadavlv~~P~y~~~~~~~~l~~~f~~va~---~lPiilYn~ 126 (283)
T 2pcq_A 78 EGALLEAKAAGAMALLATPPRYYHGSLGAGLLRYYEALAE---KMPLFLYHV 126 (283)
T ss_dssp HHHHHHHHHHTCSEEEECCCCTTGGGTTTHHHHHHHHHHH---HSCEEEEEC
T ss_pred HHHHHHHHhcCCCEEEecCCcCCCCCCHHHHHHHHHHHhc---CCCEEEEeC
Confidence 66554444678999988763 34 556666666665 689999954
No 172
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=67.49 E-value=27 Score=33.16 Aligned_cols=95 Identities=8% Similarity=0.078 Sum_probs=50.7
Q ss_pred HHHHHHHHCCCcEEEEE--ccCCHHHHHHHHHHHHhcCCCcEEEEEEEcC-----CCcCCCCCCHHHHHHHHHhhCCCCc
Q psy15811 156 PNVEALVRAGVDYLALE--TIPAEKEALALVKLLREFPGQKAWLSFSCKD-----DTHTSHGELISSAVTSCLLANPDQI 228 (581)
Q Consensus 156 ~q~~~l~~~gvD~l~~E--T~~~~~E~~aa~~a~~~~~~~pv~isft~~~-----~g~l~~G~~~~~~~~~~~~~~~~~~ 228 (581)
++++.+++.|+|.+.+= .+.+...+..+++... ..+++++.+.. .|-.....+..+.+..+.+ .|+
T Consensus 88 ~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g----~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~---~G~ 160 (244)
T 1vzw_A 88 DTLAAALATGCTRVNLGTAALETPEWVAKVIAEHG----DKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNK---EGC 160 (244)
T ss_dssp HHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHHG----GGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHH---TTC
T ss_pred HHHHHHHHcCCCEEEECchHhhCHHHHHHHHHHcC----CcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHh---CCC
Confidence 35777888999998764 4556554544444432 34666666542 1111111155566566553 677
Q ss_pred eEEEeCCCChhhH-----HHHHHHHHhhCCCCceE
Q psy15811 229 QAIGVNCVRPSHV-----STLVRCIKQSHPTVQTI 258 (581)
Q Consensus 229 ~~vGvNC~~p~~~-----~~~l~~l~~~~~~~p~~ 258 (581)
+.|.++...++.. .+.++++.+. .++|++
T Consensus 161 ~~i~~~~~~~~~~~~g~~~~~~~~i~~~-~~ipvi 194 (244)
T 1vzw_A 161 ARYVVTDIAKDGTLQGPNLELLKNVCAA-TDRPVV 194 (244)
T ss_dssp CCEEEEEC-------CCCHHHHHHHHHT-CSSCEE
T ss_pred CEEEEeccCcccccCCCCHHHHHHHHHh-cCCCEE
Confidence 7777766433221 3567777764 444443
No 173
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=67.27 E-value=1e+02 Score=30.50 Aligned_cols=152 Identities=6% Similarity=0.019 Sum_probs=86.2
Q ss_pred ChHHHHHHHHHHHHhccccccccccccccccHhhcCCCHHHHHHHHHHHHHHHHHHhhhhcCCCcccccccccccCCCeE
Q psy15811 40 EPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIE 119 (581)
Q Consensus 40 ~Pe~v~~iH~~yl~AGAdiI~TnTf~a~~~~l~~~g~~~~~~~~i~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~~~~~ 119 (581)
+.+.+++.-+.++++|++-|..+ +.+-+. .-++.++-.++.+.+++.+ .. | -.+
T Consensus 23 D~~~l~~lv~~li~~Gv~gl~v~--GttGE~---~~Ls~~Er~~v~~~~~~~~----~g------------r-----vpv 76 (300)
T 3eb2_A 23 RADVMGRLCDDLIQAGVHGLTPL--GSTGEF---AYLGTAQREAVVRATIEAA----QR------------R-----VPV 76 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSCBBTT--SGGGTG---GGCCHHHHHHHHHHHHHHH----TT------------S-----SCB
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC--ccccCc---cccCHHHHHHHHHHHHHHh----CC------------C-----CcE
Confidence 45677887888899999976544 222211 2345666666666666543 22 1 234
Q ss_pred EEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEEEc----cCCHHHHHHHHHHHHhcCCCcE
Q psy15811 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET----IPAEKEALALVKLLREFPGQKA 195 (581)
Q Consensus 120 VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~ET----~~~~~E~~aa~~a~~~~~~~pv 195 (581)
|+|. |. .+.++. .++++...+.|+|.+++=+ -++.+++..=.+.+.+..++|+
T Consensus 77 iaGv-g~------------------~~t~~a----i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPi 133 (300)
T 3eb2_A 77 VAGV-AS------------------TSVADA----VAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVEIPV 133 (300)
T ss_dssp EEEE-EE------------------SSHHHH----HHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSCE
T ss_pred EEeC-CC------------------CCHHHH----HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCE
Confidence 5543 32 223344 2455566678999998764 2467777777777766558999
Q ss_pred EEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC--ChhhHHHHHHHH
Q psy15811 196 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV--RPSHVSTLVRCI 248 (581)
Q Consensus 196 ~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~--~p~~~~~~l~~l 248 (581)
++ ..-.+++-..-++ +.+.++.+ . +..+|+=-+ ....+.++++..
T Consensus 134 il---Yn~P~~tg~~l~~-~~~~~La~--~--pnIvgiKdssgd~~~~~~~~~~~ 180 (300)
T 3eb2_A 134 VI---YTNPQFQRSDLTL-DVIARLAE--H--PRIRYIKDASTNTGRLLSIINRC 180 (300)
T ss_dssp EE---EECTTTCSSCCCH-HHHHHHHT--S--TTEEEEEECSSBHHHHHHHHHHH
T ss_pred EE---EECccccCCCCCH-HHHHHHHc--C--CCEEEEEcCCCCHHHHHHHHHHc
Confidence 86 3323333233344 34455533 3 346666665 355555555543
No 174
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=66.77 E-value=12 Score=37.68 Aligned_cols=91 Identities=16% Similarity=0.139 Sum_probs=53.5
Q ss_pred HCCCcEEEEEccCCHHHHH---HHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCCChh
Q psy15811 163 RAGVDYLALETIPAEKEAL---ALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 239 (581)
Q Consensus 163 ~~gvD~l~~ET~~~~~E~~---aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~~p~ 239 (581)
+.|+++++-|.+..-.... ...+.+....+.|+++|+.. ..+++.+..+..+... .++|-+||++|.
T Consensus 26 ~~G~gli~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~QL~g---------~~~~~~~~aa~~a~~~-~d~Iein~gcP~ 95 (318)
T 1vhn_A 26 EWGADFAFSEMVSAKGFLMNSQKTEELLPQPHERNVAVQIFG---------SEPNELSEAARILSEK-YKWIDLNAGCPV 95 (318)
T ss_dssp TTTCCCEECSCEEHHHHHTTCHHHHHHSCCTTCTTEEEEEEC---------SCHHHHHHHHHHHTTT-CSEEEEEECCCC
T ss_pred HHCcCEEEeCCEEEcccccCCHhHHHhhhCcCCCeEEEEeCC---------CCHHHHHHHHHHHHHh-CCEEEEECCCCc
Confidence 4689999999764322111 11122222247899999862 1234333333223345 899999997553
Q ss_pred -----------------hHHHHHHHHHhhCCCCceEEecCCC
Q psy15811 240 -----------------HVSTLVRCIKQSHPTVQTIVYPNKG 264 (581)
Q Consensus 240 -----------------~~~~~l~~l~~~~~~~p~~~~pnag 264 (581)
.+.++++.+++. .+.|+++.-..|
T Consensus 96 ~~~r~~~~G~~l~~~~~~~~eiv~~v~~~-~~~pv~vKir~G 136 (318)
T 1vhn_A 96 RKVVKEGAGGALLKDLRHFRYIVRELRKS-VSGKFSVKTRLG 136 (318)
T ss_dssp HHHHHTTCGGGGGSCHHHHHHHHHHHHHH-CSSEEEEEEESC
T ss_pred HhcCCCCcccchhhCHHHHHHHHHHHHHh-hCCCEEEEecCC
Confidence 345667777765 567888876554
No 175
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=66.40 E-value=4.7 Score=40.31 Aligned_cols=39 Identities=18% Similarity=0.043 Sum_probs=32.8
Q ss_pred HHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEE
Q psy15811 154 HRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAW 196 (581)
Q Consensus 154 ~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~ 196 (581)
-.+++.++.++|+|.|++|.+++.++++.+.+.+ +.|++
T Consensus 170 ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~----~~P~i 208 (287)
T 3b8i_A 170 VIQRTLAYQEAGADGICLVGVRDFAHLEAIAEHL----HIPLM 208 (287)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSHHHHHHHHTTC----CSCEE
T ss_pred HHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHhC----CCCEE
Confidence 4568899999999999999999999988776554 57887
No 176
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=66.32 E-value=46 Score=33.30 Aligned_cols=102 Identities=16% Similarity=0.222 Sum_probs=60.1
Q ss_pred HHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCC---c---CCCCCcHHHHHHHH-HhhCCCCce
Q psy15811 413 NVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDT---H---TSHGELISSAVTSC-LLANPDQIQ 485 (581)
Q Consensus 413 ~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~---~---l~~G~~~~~~~~~l-~~~~~~~~~ 485 (581)
.++.+.+.|+|++.+=......-++++++++++....|-++.+++.... . +.+ .++.+.+..+ ......+++
T Consensus 95 av~~~a~lGaD~vTVHa~~G~~~m~aa~e~a~~~~~~~~llaVtvLTS~s~~~l~~l~~-~~~~e~V~~lA~~a~~~G~d 173 (303)
T 3ru6_A 95 ACEEVSKLGVDMINIHASAGKIAIQEVMTRLSKFSKRPLVLAVSALTSFDEENFFSIYR-QKIEEAVINFSKISYENGLD 173 (303)
T ss_dssp HHHHHHTTTCSEEEEEGGGCHHHHHHHHHHHTTSSSCCEEEEECSCTTCCHHHHHHHHS-SCHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHhcCCCEEEEeccCCHHHHHHHHHHHHhcCCCceEEEEEEecCCCHHHHHHHHc-CCHHHHHHHHHHHHHHcCCC
Confidence 3456778899999998888877778888888764334566666543321 1 112 3444444332 112235666
Q ss_pred EEEECCCCCccchHHHHHHHhhCCCCeEEEeeCCCCC
Q psy15811 486 AIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGV 522 (581)
Q Consensus 486 ~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~ypNag~~ 522 (581)
|+=|. |.. ++.++....+.++.+-|-.+..
T Consensus 174 --GvV~s-~~E----~~~IR~~~~~~fl~VTPGIr~q 203 (303)
T 3ru6_A 174 --GMVCS-VFE----SKKIKEHTSSNFLTLTPGIRPF 203 (303)
T ss_dssp --EEECC-TTT----HHHHHHHSCTTSEEEECCCCTT
T ss_pred --EEEEC-HHH----HHHHHHhCCCccEEECCCcCcc
Confidence 88883 433 3345544324567888877643
No 177
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=66.31 E-value=1e+02 Score=30.48 Aligned_cols=66 Identities=21% Similarity=0.269 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHCCCcEEEEE-ccC--CHHHHHHHHHHHHh-cCCCc-EEEEEEEcCCCcCCCCCCHHHHHHHHH
Q psy15811 152 AWHRPNVEALVRAGVDYLALE-TIP--AEKEALALVKLLRE-FPGQK-AWLSFSCKDDTHTSHGELISSAVTSCL 221 (581)
Q Consensus 152 ~~~~~q~~~l~~~gvD~l~~E-T~~--~~~E~~aa~~a~~~-~~~~p-v~isft~~~~g~l~~G~~~~~~~~~~~ 221 (581)
+++.+.++.+.+.|+|.|-+- |+. ...++...++++++ .++.+ +.++|-+=++ .|..+..++.++.
T Consensus 150 ~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd----~Gla~AN~laA~~ 220 (293)
T 3ewb_X 150 AFLIEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDD----LGMATANALAAIE 220 (293)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEEEEeCCC----cChHHHHHHHHHH
Confidence 566777888889999998654 543 78888889988885 34433 6677777654 5777777776653
No 178
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=66.24 E-value=65 Score=33.73 Aligned_cols=172 Identities=13% Similarity=0.090 Sum_probs=82.0
Q ss_pred ceEEEeCCCChhhHHHHHHHHHhhCCCCceEEecCCCccccCCCc-h----------hhhccccCcc---c----C-CCC
Q psy15811 228 IQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSF-T----------SQVSRHTIKD---V----D-GHP 288 (581)
Q Consensus 228 ~~~vGvNC~~p~~~~~~l~~l~~~~~~~p~~~~pnag~~~~dG~~-g----------t~L~~~~g~~---~----~-g~~ 288 (581)
.-+..+||.+++.++.+++.-.. .+.|+++....+-.-.+||+ | ..+.+..+.+ + + +++
T Consensus 14 ~av~afn~~n~e~i~Ail~aAee--~~sPVIi~~s~~~v~~~gGY~g~~~~~~~~~v~~~A~~~~vP~~~VaLHlDHg~~ 91 (420)
T 2fiq_A 14 IGICSVCSAHPLVIEAALAFDRN--STRKVLIEATSNQVNQFGGYTGMTPADFREFVFAIADKVGFARERIILGGDHLGP 91 (420)
T ss_dssp BCEEEECCCCHHHHHHHHHHTTT--SCCCEEEEEETTTBSTTCTTTTBCHHHHHHHHHHHHHHHTCCGGGEEEEEEEESS
T ss_pred eEEEEeccCCHHHHHHHHHHHHH--cCCCEEEEcChhhhhhccCCCCCCHHHHHHHHHHHHHHcCcCcceEEEECCCCCC
Confidence 45666777788888888877665 46788877666632223443 1 1122222333 1 1 122
Q ss_pred c-ccccccCCChHHHH---HHHHHHHHHHHhhcCCcccccccccCCCC--CCCcccCCCCHHHHHHHHHHHHHHHHHHHH
Q psy15811 289 L-WSSVYLTTEPEACV---ETHRDFIRGHIETAASIGPYGTVLRDGSE--YSGHYVDSMTEADLIAWHRPNVEALVRAGV 362 (581)
Q Consensus 289 l-ws~~~~~~~Pe~v~---~vh~~yl~aiI~Tna~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~av~lA~~A~~ 362 (581)
. |. .+...+.+. +..+.++++ +|.+...|+|- +.++ .. ++++-..+-.+.-|++|++.+.
T Consensus 92 ~~w~---~~~~~~am~~a~e~i~~aI~a---------GFtSVMiD~S~~~~~~~-~p-l~eNi~~~rt~elv~~Ah~~~~ 157 (420)
T 2fiq_A 92 NCWQ---QENVDAAMEKSVELVKAYVRA---------GFSKIHLDASMSCAGDP-IP-LAPETVAERAAVLCFAAESVAT 157 (420)
T ss_dssp GGGT---TSBHHHHHHHHHHHHHHHHHT---------TCCEEEECCCSCCBTCC-SS-CCHHHHHHHHHHHHHHHHHHCC
T ss_pred cccc---ccchhhhhhhHHHHHHHHHHh---------CCCEEEECCCCCCCCCC-CC-ccHHHHHHHHHHHHHHHHHHcc
Confidence 2 43 122234444 344455554 22222223332 0000 02 3233222224566777776521
Q ss_pred hhh-hhcCCCCCceEEeccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCE
Q psy15811 363 DYL-ALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY 424 (581)
Q Consensus 363 ~~~-~~~~~~~~v~VagsiGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l~~~gvD~ 424 (581)
... .+ -.+|.|.-.|.+...... .+. ...+++++..+|-...-+.|.+.|||.
T Consensus 158 ~~~eaE-----lG~vgG~Ev~v~~~~~~~---~~~-~~~T~PeeA~~Fve~~~~~~~~tGvd~ 211 (420)
T 2fiq_A 158 DCQREQ-----LSYVIGTEVPVPGGEASA---IQS-VHITHVEDAANTLRTHQKAFIARGLTE 211 (420)
T ss_dssp HHHHHH-----CEEEEECSSCC--------------CCCCCHHHHHHHHHHHHHHHHTTTCHH
T ss_pred cCCccc-----ceEEeeeecCCCCCcccc---cCC-CCCCCHHHHHHHHHHHHHHHHhhCCCc
Confidence 000 11 146777554433211110 000 012688999999888888999999998
No 179
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=66.20 E-value=22 Score=37.05 Aligned_cols=66 Identities=15% Similarity=0.157 Sum_probs=44.7
Q ss_pred HHHHHHHHHCCCcEEEEEcc-CCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEe
Q psy15811 155 RPNVEALVRAGVDYLALETI-PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGV 233 (581)
Q Consensus 155 ~~q~~~l~~~gvD~l~~ET~-~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGv 233 (581)
.++++.++++|||+|.+.|- .+.......++.+++..+.||++.- + .+.+++. .+. ..|+|+|.+
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~g~-V---------~t~e~A~-~a~---~aGAD~I~v 211 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGN-V---------VTEEATK-ELI---ENGADGIKV 211 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEEEE-E---------CSHHHHH-HHH---HTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEEee-c---------CCHHHHH-HHH---HcCCCEEEE
Confidence 46799999999999998754 3445566677777754478888621 1 3455553 343 378898888
Q ss_pred C
Q psy15811 234 N 234 (581)
Q Consensus 234 N 234 (581)
.
T Consensus 212 G 212 (400)
T 3ffs_A 212 G 212 (400)
T ss_dssp C
T ss_pred e
Confidence 4
No 180
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=65.91 E-value=15 Score=39.79 Aligned_cols=45 Identities=16% Similarity=0.377 Sum_probs=34.8
Q ss_pred HHHHHHHHHHCCCcEEEEEcc-CCHHHHHHHHHHHHh-cCCCcEEEE
Q psy15811 154 HRPNVEALVRAGVDYLALETI-PAEKEALALVKLLRE-FPGQKAWLS 198 (581)
Q Consensus 154 ~~~q~~~l~~~gvD~l~~ET~-~~~~E~~aa~~a~~~-~~~~pv~is 198 (581)
..++++.|+++|||+|.+.|- .+-......++.+|+ ++++||++-
T Consensus 282 ~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaG 328 (556)
T 4af0_A 282 DKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAG 328 (556)
T ss_dssp HHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEec
Confidence 467899999999999999965 355566677777774 578888873
No 181
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=65.87 E-value=18 Score=35.58 Aligned_cols=62 Identities=18% Similarity=0.255 Sum_probs=43.7
Q ss_pred HHHHHHHCCCcEEEE--EccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeC
Q psy15811 157 NVEALVRAGVDYLAL--ETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 234 (581)
Q Consensus 157 q~~~l~~~gvD~l~~--ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvN 234 (581)
|++...+.|+|.+++ .+++ ..++...++.+++. ++.+|++. .+.+++...+ + .|++.||+|
T Consensus 127 qv~~A~~~GAD~VlLi~a~l~-~~~l~~l~~~a~~l-Gl~~lvev-----------~t~ee~~~A~-~---~Gad~IGv~ 189 (272)
T 3qja_A 127 QIHEARAHGADMLLLIVAALE-QSVLVSMLDRTESL-GMTALVEV-----------HTEQEADRAL-K---AGAKVIGVN 189 (272)
T ss_dssp HHHHHHHTTCSEEEEEGGGSC-HHHHHHHHHHHHHT-TCEEEEEE-----------SSHHHHHHHH-H---HTCSEEEEE
T ss_pred HHHHHHHcCCCEEEEecccCC-HHHHHHHHHHHHHC-CCcEEEEc-----------CCHHHHHHHH-H---CCCCEEEEC
Confidence 556666799999987 3444 56788888888876 88888754 2355544333 2 579999999
Q ss_pred C
Q psy15811 235 C 235 (581)
Q Consensus 235 C 235 (581)
-
T Consensus 190 ~ 190 (272)
T 3qja_A 190 A 190 (272)
T ss_dssp S
T ss_pred C
Confidence 5
No 182
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=65.73 E-value=1.1e+02 Score=30.44 Aligned_cols=124 Identities=14% Similarity=0.127 Sum_probs=70.4
Q ss_pred HHHHhCCCCEEEecccCCH---------------------------HHHHHHHHHHHhc-CCCeEEEEEEEcCCCcCCCC
Q psy15811 415 EALVRAGVDYLALETIPAE---------------------------KEALALVKLLREF-PGQKAWLSFSCKDDTHTSHG 466 (581)
Q Consensus 415 ~~l~~~gvD~i~~ET~p~~---------------------------~Ea~a~~~~~~~~-~~~pv~iSft~~~~~~l~~G 466 (581)
+.+.+.|+.++..||++.. ......++.+++. .+.|+.+++...+. +...
T Consensus 72 ~~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~~~~g~~~~~~~~~~~~~~~~~~v~i~~~~~--~~i~ 149 (336)
T 1f76_A 72 DALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKD--TPVE 149 (336)
T ss_dssp HHHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCCCBCCHHHHHHHHHHCCCCSEEEEEECCCTT--SCGG
T ss_pred HHHHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCCCCcCHHHHHHHHHhcccCCcEEEEecCCCC--Cccc
Confidence 3455789999988887531 1124445555542 25688888843221 1111
Q ss_pred CcHHHHHHHHHhhCCCCceEEEECCCCCcc-----------chHHHHHHHhhC--------CCCeEEEeeCCCCCccccc
Q psy15811 467 ELISSAVTSCLLANPDQIQAIGVNCVRPSH-----------VSTLVRCIKQSH--------PTVQTIVYPNKGGVWDSVH 527 (581)
Q Consensus 467 ~~~~~~~~~l~~~~~~~~~~iGiNC~~p~~-----------~~~~l~~l~~~~--------~~~pl~~ypNag~~~~~~~ 527 (581)
..+++..+.+..... ++++|-+|+.+|.. +..+++.++... ++.|+++.-+.+
T Consensus 150 ~~~~~~~~aa~~~~~-g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~------- 221 (336)
T 1f76_A 150 QGKDDYLICMEKIYA-YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPD------- 221 (336)
T ss_dssp GTHHHHHHHHHHHGG-GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSC-------
T ss_pred ccHHHHHHHHHHHhc-cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCC-------
Confidence 224444444432222 67888899866641 234556665442 358999985432
Q ss_pred ccccCCcCHHHHHHHHHHHHHcCCcEE
Q psy15811 528 MKWLDTEDEYSILHYVPQWLEEGVNII 554 (581)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~w~~~G~~ii 554 (581)
| +.+++.+.++...+.|+..|
T Consensus 222 --~----~~~~~~~~a~~l~~~Gvd~i 242 (336)
T 1f76_A 222 --L----SEEELIQVADSLVRHNIDGV 242 (336)
T ss_dssp --C----CHHHHHHHHHHHHHTTCSEE
T ss_pred --C----CHHHHHHHHHHHHHcCCcEE
Confidence 1 23466777777788887654
No 183
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=65.73 E-value=32 Score=34.39 Aligned_cols=99 Identities=10% Similarity=0.049 Sum_probs=59.0
Q ss_pred HHHHHHCCCcEEEEEccC-C--------------HHHHHHHHHHHHhcCCCcEEEEEEE----cCCCcCCCCCCHHHHHH
Q psy15811 158 VEALVRAGVDYLALETIP-A--------------EKEALALVKLLREFPGQKAWLSFSC----KDDTHTSHGELISSAVT 218 (581)
Q Consensus 158 ~~~l~~~gvD~l~~ET~~-~--------------~~E~~aa~~a~~~~~~~pv~isft~----~~~g~l~~G~~~~~~~~ 218 (581)
++..+++|+|.|-+-.-. + ++.++.+++.+|+. +..|-+.+++ +..++ .+++.+++
T Consensus 87 i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~-G~~v~~~i~~~~~~~~~~~----~~~~~~~~ 161 (307)
T 1ydo_A 87 LENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKA-NLTTRAYLSTVFGCPYEKD----VPIEQVIR 161 (307)
T ss_dssp HHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHT-TCEEEEEEECTTCBTTTBC----CCHHHHHH
T ss_pred HHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC-CCEEEEEEEEEecCCcCCC----CCHHHHHH
Confidence 566677899997554322 2 24556777777775 7776554443 33333 34444443
Q ss_pred HHHhhCCCCceEEEeCC----CChhhHHHHHHHHHhhCCCCceEEec
Q psy15811 219 SCLLANPDQIQAIGVNC----VRPSHVSTLVRCIKQSHPTVQTIVYP 261 (581)
Q Consensus 219 ~~~~~~~~~~~~vGvNC----~~p~~~~~~l~~l~~~~~~~p~~~~p 261 (581)
.+......|++.|.+-= ..|..+.++++.+++..+++||.+..
T Consensus 162 ~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~l~~H~ 208 (307)
T 1ydo_A 162 LSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFPANQIALHF 208 (307)
T ss_dssp HHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTTSCGGGEEEEC
T ss_pred HHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 33222246677666553 35999999999999753345665553
No 184
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=65.26 E-value=1.3e+02 Score=31.11 Aligned_cols=109 Identities=12% Similarity=0.075 Sum_probs=60.9
Q ss_pred CCHHHHHH----HHHHHHHHHHhCCCCE--E--EecccC------CHH----HHHHHHHHHHh-cCCCeEEEEEEEcCCC
Q psy15811 401 MTEADLIA----WHRPNVEALVRAGVDY--L--ALETIP------AEK----EALALVKLLRE-FPGQKAWLSFSCKDDT 461 (581)
Q Consensus 401 ~~~~~~~~----~~~~~~~~l~~~gvD~--i--~~ET~p------~~~----Ea~a~~~~~~~-~~~~pv~iSft~~~~~ 461 (581)
.+.+++.+ +=+..++.|.+.|++. + .-|+.. ... -.+++..++|+ .++.+|++|++...+.
T Consensus 130 ~~~~~l~~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~~g~~~~~~~~~la~ll~ag~~aVR~v~p~~~V~ih~~~~~~~ 209 (399)
T 1ur4_A 130 LNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPETS 209 (399)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECCTTST
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEccccccccCCcccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCCcch
Confidence 56665543 4446777787777654 3 335433 122 23455667774 4678899998543211
Q ss_pred cCCCCCcHHHHHHHHHhhCCCCceEEEECCCCCc-----cchHHHHHHHhhCCCCeEEEe
Q psy15811 462 HTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS-----HVSTLVRCIKQSHPTVQTIVY 516 (581)
Q Consensus 462 ~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~~p~-----~~~~~l~~l~~~~~~~pl~~y 516 (581)
..+....+.+. ..+...+.||+|+-... .+...|+.+...- ++|+++-
T Consensus 210 -----~~~~~~~d~l~-~~g~d~DvIG~syYp~W~~~l~~l~~~l~~l~~ry-gKpV~v~ 262 (399)
T 1ur4_A 210 -----GRYAWIAETLH-RHHVDYDVFASSYYPFWHGTLKNLTSVLTSVADTY-GKKVMVA 262 (399)
T ss_dssp -----THHHHHHHHHH-HTTCCCSEEEEEECTTTSCCHHHHHHHHHHHHHHH-CCEEEEE
T ss_pred -----HHHHHHHHHHH-HcCCCcCeEeEecCccchhhHHHHHHHHHHHHHHh-CCcEEEE
Confidence 23333344443 23557899999984332 2333455554333 5787763
No 185
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=65.06 E-value=14 Score=39.75 Aligned_cols=65 Identities=12% Similarity=0.149 Sum_probs=40.0
Q ss_pred HHHHHHHCCCcEEEEE----c-----------cCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHH
Q psy15811 157 NVEALVRAGVDYLALE----T-----------IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL 221 (581)
Q Consensus 157 q~~~l~~~gvD~l~~E----T-----------~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~ 221 (581)
.++.+.++|+|+|.+- + .+.+.-+..+.+++++. ++||+.+ |-.. +..++.+.+.
T Consensus 283 ~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~-~iPVIa~------GGI~---~~~di~kal~ 352 (490)
T 4avf_A 283 AAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGT-GVPLIAD------GGIR---FSGDLAKAMV 352 (490)
T ss_dssp HHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTT-TCCEEEE------SCCC---SHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccC-CCcEEEe------CCCC---CHHHHHHHHH
Confidence 3577889999999872 1 34554555556666554 7999973 2222 3445554442
Q ss_pred hhCCCCceEEEeCC
Q psy15811 222 LANPDQIQAIGVNC 235 (581)
Q Consensus 222 ~~~~~~~~~vGvNC 235 (581)
.|+++|++-=
T Consensus 353 ----~GAd~V~vGs 362 (490)
T 4avf_A 353 ----AGAYCVMMGS 362 (490)
T ss_dssp ----HTCSEEEECT
T ss_pred ----cCCCeeeecH
Confidence 4678777754
No 186
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=65.06 E-value=1.1e+02 Score=29.95 Aligned_cols=92 Identities=9% Similarity=0.083 Sum_probs=54.6
Q ss_pred HHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECC
Q psy15811 412 PNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 491 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC 491 (581)
.-++.+.++|||.+++=++|. .|+....+.+++ .++..+.-+ . ..++.+ -++.+.+....-+-.+.+++
T Consensus 114 ~f~~~~~~aGvdgvii~Dlp~-ee~~~~~~~~~~-~gl~~i~li--a------P~t~~e-ri~~i~~~~~gfvY~vS~~G 182 (267)
T 3vnd_A 114 EFYTKAQAAGVDSVLIADVPV-EESAPFSKAAKA-HGIAPIFIA--P------PNADAD-TLKMVSEQGEGYTYLLSRAG 182 (267)
T ss_dssp HHHHHHHHHTCCEEEETTSCG-GGCHHHHHHHHH-TTCEEECEE--C------TTCCHH-HHHHHHHHCCSCEEESCCCC
T ss_pred HHHHHHHHcCCCEEEeCCCCH-hhHHHHHHHHHH-cCCeEEEEE--C------CCCCHH-HHHHHHHhCCCcEEEEecCC
Confidence 445566778999999999886 678888888887 477654333 1 122232 33333222222233334555
Q ss_pred -CC-----CccchHHHHHHHhhCCCCeEEE
Q psy15811 492 -VR-----PSHVSTLVRCIKQSHPTVQTIV 515 (581)
Q Consensus 492 -~~-----p~~~~~~l~~l~~~~~~~pl~~ 515 (581)
++ +..+...+++++... +.|+++
T Consensus 183 vTG~~~~~~~~~~~~v~~vr~~~-~~pv~v 211 (267)
T 3vnd_A 183 VTGTESKAGEPIENILTQLAEFN-APPPLL 211 (267)
T ss_dssp CC--------CHHHHHHHHHTTT-CCCEEE
T ss_pred CCCCccCCcHHHHHHHHHHHHhc-CCCEEE
Confidence 32 334677888888876 688877
No 187
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=64.72 E-value=1.4e+02 Score=31.03 Aligned_cols=109 Identities=12% Similarity=0.090 Sum_probs=62.1
Q ss_pred CCHHHHHH----HHHHHHHHHHHCCCcEEEE----EccC------CHHH----HHHHHHHHHhc-CCCcEEEEEEEcCCC
Q psy15811 145 MTEADLIA----WHRPNVEALVRAGVDYLAL----ETIP------AEKE----ALALVKLLREF-PGQKAWLSFSCKDDT 205 (581)
Q Consensus 145 ~~~~~~~~----~~~~q~~~l~~~gvD~l~~----ET~~------~~~E----~~aa~~a~~~~-~~~pv~isft~~~~g 205 (581)
.+++++.+ +-+..++.|.+.|++.-++ |+.. ..+. ++++++++|+. ++.+|++.++...+
T Consensus 130 ~~~~~l~~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~~g~~~~~~~~~la~ll~ag~~aVR~v~p~~~V~ih~~~~~~- 208 (399)
T 1ur4_A 130 LNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPET- 208 (399)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECCTTS-
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEccccccccCCcccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCCcc-
Confidence 46665544 4446778888888776555 4322 2333 45566777754 57778775533211
Q ss_pred cCCCCCCHHHHHHHHHhhCCCCceEEEeCCCC-----hhhHHHHHHHHHhhCCCCceEEe
Q psy15811 206 HTSHGELISSAVTSCLLANPDQIQAIGVNCVR-----PSHVSTLVRCIKQSHPTVQTIVY 260 (581)
Q Consensus 206 ~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~~-----p~~~~~~l~~l~~~~~~~p~~~~ 260 (581)
-..+...+..+.. .....|.||+|+-. .+.+...|+.+... -++||++.
T Consensus 209 ----~~~~~~~~d~l~~-~g~d~DvIG~syYp~W~~~l~~l~~~l~~l~~r-ygKpV~v~ 262 (399)
T 1ur4_A 209 ----SGRYAWIAETLHR-HHVDYDVFASSYYPFWHGTLKNLTSVLTSVADT-YGKKVMVA 262 (399)
T ss_dssp ----TTHHHHHHHHHHH-TTCCCSEEEEEECTTTSCCHHHHHHHHHHHHHH-HCCEEEEE
T ss_pred ----hHHHHHHHHHHHH-cCCCcCeEeEecCccchhhHHHHHHHHHHHHHH-hCCcEEEE
Confidence 1223333344432 23458999999842 34455667776542 36787764
No 188
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=64.70 E-value=19 Score=35.18 Aligned_cols=108 Identities=16% Similarity=0.161 Sum_probs=63.3
Q ss_pred CCHHHHHHHHHHHHHHHHhCC-CCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhh
Q psy15811 401 MTEADLIAWHRPNVEALVRAG-VDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 479 (581)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~~g-vD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~ 479 (581)
.+.++..+.++ ...+.| +|+|=+|-.... ..+.+++..++ .+..+++|+.- -..+++-+.+.+.+..+
T Consensus 97 ~~~~~~~~ll~----~~~~~g~~d~iDvEl~~~~-~~~~l~~~~~~-~~~kvI~S~Hd--f~~tP~~~el~~~~~~~--- 165 (257)
T 2yr1_A 97 LNEAEVRRLIE----AICRSGAIDLVDYELAYGE-RIADVRRMTEE-CSVWLVVSRHY--FDGTPRKETLLADMRQA--- 165 (257)
T ss_dssp SCHHHHHHHHH----HHHHHTCCSEEEEEGGGTT-HHHHHHHHHHH-TTCEEEEEEEE--SSCCCCHHHHHHHHHHH---
T ss_pred CCHHHHHHHHH----HHHHcCCCCEEEEECCCCh-hHHHHHHHHHh-CCCEEEEEecC--CCCCcCHHHHHHHHHHH---
Confidence 45555444444 444456 999999965433 56666776666 58899999953 22333333355555555
Q ss_pred CCCCceEEEECC--CCCccchHHHHHHHhh--CCCCeEEEeeCC
Q psy15811 480 NPDQIQAIGVNC--VRPSHVSTLVRCIKQS--HPTVQTIVYPNK 519 (581)
Q Consensus 480 ~~~~~~~iGiNC--~~p~~~~~~l~~l~~~--~~~~pl~~ypNa 519 (581)
...+++.+=|-+ .+++++..+++..... ..+.|++.+.-+
T Consensus 166 ~~~gaDivKia~~a~s~~D~l~ll~~~~~~~~~~~~P~I~~~MG 209 (257)
T 2yr1_A 166 ERYGADIAKVAVMPKSPEDVLVLLQATEEARRELAIPLITMAMG 209 (257)
T ss_dssp HHTTCSEEEEEECCSSHHHHHHHHHHHHHHHHHCSSCEEEEECT
T ss_pred HhcCCCEEEEEeccCCHHHHHHHHHHHHHHhccCCCCEEEEECC
Confidence 334555555555 4566666666543322 125899888754
No 189
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=64.65 E-value=41 Score=31.45 Aligned_cols=123 Identities=13% Similarity=0.105 Sum_probs=71.3
Q ss_pred HHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECC
Q psy15811 412 PNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 491 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC 491 (581)
++++...++|+|++..-- .+ ..++++.++ .++|+++.. .+++++.++. ..+++.|++
T Consensus 74 d~~~~A~~~GAd~v~~~~-~d----~~v~~~~~~-~g~~~i~G~-----------~t~~e~~~A~----~~Gad~v~~-- 130 (207)
T 2yw3_A 74 KEAEAALEAGAAFLVSPG-LL----EEVAALAQA-RGVPYLPGV-----------LTPTEVERAL----ALGLSALKF-- 130 (207)
T ss_dssp HHHHHHHHHTCSEEEESS-CC----HHHHHHHHH-HTCCEEEEE-----------CSHHHHHHHH----HTTCCEEEE--
T ss_pred HHHHHHHHcCCCEEEcCC-CC----HHHHHHHHH-hCCCEEecC-----------CCHHHHHHHH----HCCCCEEEE--
Confidence 778888889999997542 11 344555555 478888763 1366776655 236788888
Q ss_pred CCCccc---hHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHHHcCCcEEee---cCCCchHHH
Q psy15811 492 VRPSHV---STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGG---CCEVTSYEI 565 (581)
Q Consensus 492 ~~p~~~---~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~~G~~iiGG---CCGt~P~hI 565 (581)
.|... ...|+.++...+++|++ |-.|-.. +.+.+|++.|+..++. =|.-++++|
T Consensus 131 -fpa~~~gG~~~lk~l~~~~~~ipvv--aiGGI~~-----------------~n~~~~l~aGa~~vavgSai~~~d~~~i 190 (207)
T 2yw3_A 131 -FPAEPFQGVRVLRAYAEVFPEVRFL--PTGGIKE-----------------EHLPHYAALPNLLAVGGSWLLQGNLEAV 190 (207)
T ss_dssp -TTTTTTTHHHHHHHHHHHCTTCEEE--EBSSCCG-----------------GGHHHHHTCSSBSCEEESGGGSSCHHHH
T ss_pred -ecCccccCHHHHHHHHhhCCCCcEE--EeCCCCH-----------------HHHHHHHhCCCcEEEEehhhhCCCHHHH
Confidence 33322 36678877654457765 4443211 1236788888644332 133556667
Q ss_pred HHHHHHH-hcccC
Q psy15811 566 QQMRIMI-DEFNT 577 (581)
Q Consensus 566 ~al~~~l-~~~~~ 577 (581)
++..+.+ +..+|
T Consensus 191 ~~~a~~~~~~~~~ 203 (207)
T 2yw3_A 191 RAKVRAAKALLSP 203 (207)
T ss_dssp HHHHHHHHHHC--
T ss_pred HHHHHHHHHHhcc
Confidence 7765444 34444
No 190
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=64.59 E-value=47 Score=33.70 Aligned_cols=142 Identities=12% Similarity=0.119 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEE-ecccCC-----------HHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHH
Q psy15811 404 ADLIAWHRPNVEALVRAGVDYLA-LETIPA-----------EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISS 471 (581)
Q Consensus 404 ~~~~~~~~~~~~~l~~~gvD~i~-~ET~p~-----------~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~ 471 (581)
+.+.+.+.+-++.+.++|+|.|. +++... ..=.+.+++.+++. +.|++ .|+|.. +.
T Consensus 189 ~~i~~~~~~~~~~~~~aGad~i~i~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~-g~~~i-~~~~G~-~~--------- 256 (359)
T 2inf_A 189 SKLADMIIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKE-NVPLI-MFGVGA-SH--------- 256 (359)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHHGGG-CSCEE-EECTTC-GG---------
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHc-CCcEE-EEcCCc-HH---------
Confidence 44555666677777789999874 554332 22234455566553 67865 555532 11
Q ss_pred HHHHHHhhCCCCceEEEECCCCCccchHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHHHcCC
Q psy15811 472 AVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGV 551 (581)
Q Consensus 472 ~~~~l~~~~~~~~~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~~G~ 551 (581)
.+..+ ...+++++++-... . ++.++..+ .-+.+.-|--. . .. ..+++...+.+++.++.|.
T Consensus 257 ~l~~l---~~~g~d~~~~d~~~--d----~~~~~~~g--~~~~l~Gnldp----~--~l--~~t~e~I~~~v~~~l~~~~ 317 (359)
T 2inf_A 257 LAGDW---HDLPLDVVGLDWRL--G----IDEARSKG--ITKTVQGNLDP----S--IL--LAPWEVIEQKTKEILDQGM 317 (359)
T ss_dssp GHHHH---HTSSCSEEECCTTS--C----HHHHHHTT--CCSEEECCBCG----G--GG--GSCHHHHHHHHHHHHHHHT
T ss_pred HHHHH---HHhCCCEEEeCCCC--C----HHHHHHcC--CCEEEEecCCh----H--Hh--cCCHHHHHHHHHHHHHhCC
Confidence 23344 23467777764311 1 23333322 12445555421 1 11 2457888888888876432
Q ss_pred ----cEEeecCC----CchHHHHHHHHHHhccc
Q psy15811 552 ----NIIGGCCE----VTSYEIQQMRIMIDEFN 576 (581)
Q Consensus 552 ----~iiGGCCG----t~P~hI~al~~~l~~~~ 576 (581)
-|++--|| |.|++|+++.+.++++.
T Consensus 318 ~~~g~Il~~gcgi~~~~~~enl~a~ve~v~~~~ 350 (359)
T 2inf_A 318 ESDGFIFNLGHGVFPDVSPEVLKKLTAFVHEYS 350 (359)
T ss_dssp TSSCEEBCBSSCCCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCCeEEeCCCCCCCCcCHHHHHHHHHHHHHhh
Confidence 36666676 56799999999887654
No 191
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=64.47 E-value=11 Score=36.76 Aligned_cols=99 Identities=17% Similarity=0.212 Sum_probs=66.0
Q ss_pred HHHHHHHHHCCCcEEEE-----EccCCHHHHHHHHHHHHhcC-CCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCc
Q psy15811 155 RPNVEALVRAGVDYLAL-----ETIPAEKEALALVKLLREFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 228 (581)
Q Consensus 155 ~~q~~~l~~~gvD~l~~-----ET~~~~~E~~aa~~a~~~~~-~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~ 228 (581)
.++++.+.++|+|.+-+ -.+|++..-..+++.+|+.. ++|+-+-+.+.+. +..+..+.+ .|+
T Consensus 43 ~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p---------~~~i~~~~~---aGA 110 (246)
T 3inp_A 43 GDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPV---------DALIESFAK---AGA 110 (246)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSC---------HHHHHHHHH---HTC
T ss_pred HHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCH---------HHHHHHHHH---cCC
Confidence 46678888899998866 23455655667778888654 8999888876643 334444433 678
Q ss_pred eEEEeCCCChhhHHHHHHHHHhhCCCCceEEecCCCc
Q psy15811 229 QAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGV 265 (581)
Q Consensus 229 ~~vGvNC~~p~~~~~~l~~l~~~~~~~p~~~~pnag~ 265 (581)
+.|-+=+-..+++.+.++.+++.+.+.-+.+.|+..+
T Consensus 111 d~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~ 147 (246)
T 3inp_A 111 TSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGI 147 (246)
T ss_dssp SEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCS
T ss_pred CEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCH
Confidence 8888877534577888888887544445566665553
No 192
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=64.43 E-value=26 Score=34.22 Aligned_cols=91 Identities=16% Similarity=0.217 Sum_probs=59.0
Q ss_pred HHHHHHHHHHCCCcEEEEEccCC----------------------HHHHHHHHHHHHhc-CCCcEEEEEEEcCCCcCCCC
Q psy15811 154 HRPNVEALVRAGVDYLALETIPA----------------------EKEALALVKLLREF-PGQKAWLSFSCKDDTHTSHG 210 (581)
Q Consensus 154 ~~~q~~~l~~~gvD~l~~ET~~~----------------------~~E~~aa~~a~~~~-~~~pv~isft~~~~g~l~~G 210 (581)
..+.++.|.++|||.|-+-+-.+ +......++.+|+. .++|+++ |+..+ .-...|
T Consensus 33 ~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~l-m~y~n-~v~~~g 110 (268)
T 1qop_A 33 SLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGL-LMYAN-LVFNNG 110 (268)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEE-EECHH-HHHTTC
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEE-EEccc-HHHHhh
Confidence 35778899999999998876222 23334566777765 6899776 33211 011112
Q ss_pred CCHHHHHHHHHhhCCCCceEEEeCCCChhhHHHHHHHHHhh
Q psy15811 211 ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQS 251 (581)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~vGvNC~~p~~~~~~l~~l~~~ 251 (581)
.+..+..+.+ .|++++-+....++++..+++.++++
T Consensus 111 --~~~~~~~~~~---aGadgii~~d~~~e~~~~~~~~~~~~ 146 (268)
T 1qop_A 111 --IDAFYARCEQ---VGVDSVLVADVPVEESAPFRQAALRH 146 (268)
T ss_dssp --HHHHHHHHHH---HTCCEEEETTCCGGGCHHHHHHHHHT
T ss_pred --HHHHHHHHHH---cCCCEEEEcCCCHHHHHHHHHHHHHc
Confidence 3556666554 67888888887777788888887774
No 193
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=64.34 E-value=17 Score=37.48 Aligned_cols=28 Identities=18% Similarity=0.111 Sum_probs=20.3
Q ss_pred cCCChHHHHHHHHHHHHhcccccccccc
Q psy15811 37 LTTEPEACVETHRDFIRAGADIIQSSCY 64 (581)
Q Consensus 37 ~l~~Pe~v~~iH~~yl~AGAdiI~TnTf 64 (581)
.+-.++...+.-+..+++|+|+|+.++=
T Consensus 94 ~~g~~~~~~e~~~~a~~aGvdvI~id~a 121 (361)
T 3r2g_A 94 SVGCTENELQRAEALRDAGADFFCVDVA 121 (361)
T ss_dssp EECSSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred EcCCCHHHHHHHHHHHHcCCCEEEEeCC
Confidence 3444555566678889999999988753
No 194
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=64.17 E-value=68 Score=31.66 Aligned_cols=101 Identities=14% Similarity=0.051 Sum_probs=62.3
Q ss_pred HHHHHHHhCCCCEEEecccCC---------------HHHHHHHHHHHHhcCCCeEEEEEE----EcCCCcCCCCCcHHHH
Q psy15811 412 PNVEALVRAGVDYLALETIPA---------------EKEALALVKLLREFPGQKAWLSFS----CKDDTHTSHGELISSA 472 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~p~---------------~~Ea~a~~~~~~~~~~~pv~iSft----~~~~~~l~~G~~~~~~ 472 (581)
..++.+.++|+|.|-+=.-.+ +..++.+++.+++ .+++|.+.++ |.+.++ .+++.+
T Consensus 84 ~~i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~-~G~~v~~~l~~~~~~~~~~~----~~~~~~ 158 (298)
T 2cw6_A 84 KGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQS-ANISVRGYVSCALGCPYEGK----ISPAKV 158 (298)
T ss_dssp HHHHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHH-TTCEEEEEEETTTCBTTTBS----CCHHHH
T ss_pred HhHHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHH-CCCeEEEEEEEEeeCCcCCC----CCHHHH
Confidence 346777889999986643333 1355566777776 5888776554 333333 234443
Q ss_pred HHHHHhhCCCCceEEEECC----CCCccchHHHHHHHhhCCCCeEEEee
Q psy15811 473 VTSCLLANPDQIQAIGVNC----VRPSHVSTLVRCIKQSHPTVQTIVYP 517 (581)
Q Consensus 473 ~~~l~~~~~~~~~~iGiNC----~~p~~~~~~l~~l~~~~~~~pl~~yp 517 (581)
++.+......+++.|.+.- ..|..+..+++.++...++.|+.+..
T Consensus 159 ~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~i~~H~ 207 (298)
T 2cw6_A 159 AEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHC 207 (298)
T ss_dssp HHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGGEEEEE
T ss_pred HHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 3333222344666666653 47888999999998875447787766
No 195
>2yim_A Probable alpha-methylacyl-COA racemase MCR (2-methylacyl-COA racemase) (2-arylpropionyl-COA...; isomerase, methyl-COA racemase; HET: MC4; 1.41A {Mycobacterium tuberculosis} PDB: 2gce_A* 1x74_A* 2gd0_A* 2gd2_A* 2gd6_A* 2gci_A*
Probab=64.11 E-value=8.5 Score=39.68 Aligned_cols=73 Identities=14% Similarity=0.100 Sum_probs=50.1
Q ss_pred ccccCCChHHHHHHHHHHHHhccccccccccccccccHhhcCCCHHHHHHHHHHHHHHHHHHhhhhcCCCcccccccccc
Q psy15811 34 SVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNL 113 (581)
Q Consensus 34 ~~~~l~~Pe~v~~iH~~yl~AGAdiI~TnTf~a~~~~l~~~g~~~~~~~~i~~~av~lA~~a~~~~~~~~~~~~~~~~~~ 113 (581)
-.++|.+|+-.+.+++ |-+.|||+.+| |+ +..+.++|++.+.+++ . .
T Consensus 57 i~lDLk~~~gr~~l~~--Lv~~ADV~ven-fr--PG~~~rlGl~ye~L~~--------------~------------n-- 103 (360)
T 2yim_A 57 VTADLKSDQGLELALK--LIAKADVLIEG-YR--PGVTERLGLGPEECAK--------------V------------N-- 103 (360)
T ss_dssp EECCTTSHHHHHHHHH--HHTTCSEEEEC-SC--TTHHHHHTCSHHHHHH--------------H------------C--
T ss_pred EEEeCCCHHHHHHHHH--HHhhCCEEEEc-CC--cchHhhcCCCHHHHHH--------------h------------C--
Confidence 3577999997766665 45779999999 65 6678899998655432 1 1
Q ss_pred cCCCeEEEeecCCcCCCCCCCCCCCCCCCCCCCHHHH
Q psy15811 114 LTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADL 150 (581)
Q Consensus 114 ~~~~~~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~ 150 (581)
+.+|..||-.||. +|+|.+...+|.+
T Consensus 104 ---P~LIy~sisGfG~--------~GP~~~~pg~D~~ 129 (360)
T 2yim_A 104 ---DRLIYARMTGWGQ--------TGPRSQQAGHDIN 129 (360)
T ss_dssp ---TTCEEEEEESSCS--------SSTTTTSCCCHHH
T ss_pred ---CCeEEEEEecCCC--------CCCCCCCCCcHHH
Confidence 6688889988886 2445444444444
No 196
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=63.97 E-value=6 Score=39.79 Aligned_cols=45 Identities=24% Similarity=0.196 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEE
Q psy15811 152 AWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSF 199 (581)
Q Consensus 152 ~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isf 199 (581)
+.--+|++++.++|+|.|++|-+.+.+|++.+++.++ +.|+++.+
T Consensus 170 deAi~Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~~~---~~Pl~~n~ 214 (302)
T 3fa4_A 170 EESVARLRAARDAGADVGFLEGITSREMARQVIQDLA---GWPLLLNM 214 (302)
T ss_dssp HHHHHHHHHHHTTTCSEEEETTCCCHHHHHHHHHHTT---TSCEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEeecCCCCHHHHHHHHHHhc---CCceeEEE
Confidence 3345789999999999999999999999988877764 57887654
No 197
>1q7e_A Hypothetical protein YFDW; structural genomics, intertwined dimer, PSI, protein structu initiative; HET: MSE; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1pqy_A* 1q6y_A* 1pt7_A 1pt5_A 1pt8_A*
Probab=63.82 E-value=8.5 Score=40.68 Aligned_cols=75 Identities=13% Similarity=0.156 Sum_probs=45.4
Q ss_pred cccCCChHHHHHHHHHHHHhccccccccccccccccHhhcCCCHHHHHHHHHHHHHHHHHHhhhhcCCCccccccccccc
Q psy15811 35 VYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLL 114 (581)
Q Consensus 35 ~~~l~~Pe~v~~iH~~yl~AGAdiI~TnTf~a~~~~l~~~g~~~~~~~~i~~~av~lA~~a~~~~~~~~~~~~~~~~~~~ 114 (581)
.++|.+|+-.+.+++ |-+.|||+.+| |+ +..+.++|++.+.+++ . .
T Consensus 73 ~LDLk~~eGr~~l~~--Lv~~ADVlien-fr--PGv~~rlGL~ye~L~~--------------~------------N--- 118 (428)
T 1q7e_A 73 ELNTKTAEGKEVMEK--LIREADILVEN-FH--PGAIDHMGFTWEHIQE--------------I------------N--- 118 (428)
T ss_dssp ECCTTSHHHHHHHHH--HHHHCSEEEEC-CC--C-------CCHHHHHH--------------H------------C---
T ss_pred EeeCCCHHHHHHHHH--HHhhCCEEEEc-CC--cchHhhcCCCHHHHHH--------------h------------C---
Confidence 467889987666555 44569999999 65 5667889998655432 1 1
Q ss_pred CCCeEEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHH
Q psy15811 115 TGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAW 153 (581)
Q Consensus 115 ~~~~~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~ 153 (581)
+.+|..||-.||. +|+|.+..-+|.+.+.
T Consensus 119 --P~LIy~sisGfG~--------~GP~a~~pg~D~~~qA 147 (428)
T 1q7e_A 119 --PRLIFGSIKGFDE--------CSPYVNVKAYENVAQA 147 (428)
T ss_dssp --TTCEEEEEESSCT--------TSTTTTSCCCHHHHHH
T ss_pred --CCeEEEEEeeCCC--------CCCCCCCCCcHHHHHH
Confidence 6688999999986 3455555555555443
No 198
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=63.71 E-value=81 Score=31.61 Aligned_cols=225 Identities=15% Similarity=0.161 Sum_probs=139.2
Q ss_pred HHHHHHHHHHHHhccccccccccccccccHhh-cCCCHHHHHHHHHHHHHHHHHHhhhhcCCCcccccccccccCCCeEE
Q psy15811 42 EACVETHRDFIRAGADIIQSSCYQANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIET 120 (581)
Q Consensus 42 e~v~~iH~~yl~AGAdiI~TnTf~a~~~~l~~-~g~~~~~~~~i~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~~~~~V 120 (581)
+.+.+.-++-++.|-.-|.- |+. +.. +. .|-....-.-+..+|++..|+..- +.+|
T Consensus 64 d~l~~~~~~~~~lGi~~v~L--Fgv-p~~-Kd~~gs~A~~~~g~v~rair~iK~~~p-------------------~l~v 120 (328)
T 1w1z_A 64 DRAVEECKELYDLGIQGIDL--FGI-PEQ-KTEDGSEAYNDNGILQQAIRAIKKAVP-------------------ELCI 120 (328)
T ss_dssp HHHHHHHHHHHHHTCCEEEE--EEC-CSS-CCSSCGGGGCTTSHHHHHHHHHHHHST-------------------TSEE
T ss_pred HHHHHHHHHHHHCCCCEEEE--ECC-CCC-CCccccccCCCCChHHHHHHHHHHHCC-------------------CeEE
Confidence 56666677888999875443 444 221 11 221111112378888888877653 3445
Q ss_pred Eee--cCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhc--CCCcEE
Q psy15811 121 AAS--IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF--PGQKAW 196 (581)
Q Consensus 121 ags--iGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~--~~~pv~ 196 (581)
..+ +-||...=+.|--- .+.+..|+-.+.+.+|+-..+++|+|++.==-|-|- .+.++.+++.+. .+.|++
T Consensus 121 itDvcLc~YT~HGHcGil~----~g~V~ND~Tl~~L~k~Als~A~AGADiVAPSdMMDG-rV~aIR~aLd~~G~~~v~Im 195 (328)
T 1w1z_A 121 MTDVALDPFTPFGHDGLVK----DGIILNDETVEVLQKMAVSHAEAGADFVSPSDMMDG-RIGAIREALDETDHSDVGIL 195 (328)
T ss_dssp EEEECSTTTSTTSCSSEES----SSCEEHHHHHHHHHHHHHHHHHHTCSEEEECSCCTT-HHHHHHHHHHHTTCTTSEEE
T ss_pred EEeeecccCCCCCceeecc----CCcCccHHHHHHHHHHHHHHHHcCCCeEeccccccc-HHHHHHHHHHhCCCCCceee
Confidence 544 66776655444211 134788999999999999999999999987777776 567777777753 356544
Q ss_pred EEEEEc--C-----------------CC--cCCCCCCHHHHHHHHHhhCCCCceEEEeCCCChhhHHHHHHHHHhhCCCC
Q psy15811 197 LSFSCK--D-----------------DT--HTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTV 255 (581)
Q Consensus 197 isft~~--~-----------------~g--~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~~p~~~~~~l~~l~~~~~~~ 255 (581)
|.+.+ + |. +-++-..-.+|+..+......|+|.|.|-=+.|. +.+++.++.. .++
T Consensus 196 -sYsaKyASafYGPFRdAa~Sap~fGDrktYQmdpaN~~EAlrE~~~Di~EGAD~vMVKPal~Y--LDIir~vk~~-~~~ 271 (328)
T 1w1z_A 196 -SYAAKYASSFYGPFRDALHSAPQFGDKSTYQMNPANTEEAMKEVELDIVEGADIVMVKPGLAY--LDIVWRTKER-FDV 271 (328)
T ss_dssp -EEEEEBCCTTCHHHHHHTTCCCCCSCSTTTSBCTTCSHHHHHHHHHHHHHTCSEEEEESCGGG--HHHHHHHHHH-HCS
T ss_pred -ehhHHHhhhccchHHHHhccCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCCEEEEcCCCch--HHHHHHHHHh-cCC
Confidence 55443 1 11 1223333455665543333568999999877653 5778888876 689
Q ss_pred ceEEecCCC-ccccCCCchhhhccccCcccCCCCcccccccCCChHHHHHHHHHHHHH---HHhhc
Q psy15811 256 QTIVYPNKG-VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRG---HIETA 317 (581)
Q Consensus 256 p~~~~pnag-~~~~dG~~gt~L~~~~g~~~~g~~lws~~~~~~~Pe~v~~vh~~yl~a---iI~Tn 317 (581)
|+.+|--+| .-+ ++.. .. .+ | ++....+.+.+..|-+| +|.|.
T Consensus 272 P~aaYqVSGEYAM--------ikaA--a~--~G--w-----iD~~~~v~Esl~~~kRAGAd~IiTY 318 (328)
T 1w1z_A 272 PVAIYHVSGEYAM--------VKAA--AA--KG--W-----IDEDRVMMESLLCMKRAGADIIFTY 318 (328)
T ss_dssp CEEEEECHHHHHH--------HHHH--HH--TT--S-----SCHHHHHHHHHHHHHHHTCSEEEET
T ss_pred CEEEEEccHHHHH--------HHHH--HH--cC--C-----ccHHHHHHHHHHHHHhcCCCEEeee
Confidence 999995555 111 1110 00 11 3 55666788888999999 66665
No 199
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=63.70 E-value=1.3e+02 Score=30.48 Aligned_cols=138 Identities=9% Similarity=0.005 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHhCCCC-EEEeccc-----------CCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHH
Q psy15811 408 AWHRPNVEALVRAGVD-YLALETI-----------PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTS 475 (581)
Q Consensus 408 ~~~~~~~~~l~~~gvD-~i~~ET~-----------p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~ 475 (581)
+.|.+.++.+.+.++| +|-+--- .+.+.+..+++++++..++|+++-++- + .++.+.++.
T Consensus 141 ~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p--~------~~~~~~a~~ 212 (345)
T 3oix_A 141 EETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIKLPP--Y------FDIVHFDQA 212 (345)
T ss_dssp HHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECC--C------CCHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEEECC--C------CCHHHHHHH
Confidence 3455667777777876 8766532 245667888888887778999988853 1 356666665
Q ss_pred HHhhCCCCceEEEECCCC------------Cc-------------cc----hHHHHHHHhhCC-CCeEEEeeCCCCCccc
Q psy15811 476 CLLANPDQIQAIGVNCVR------------PS-------------HV----STLVRCIKQSHP-TVQTIVYPNKGGVWDS 525 (581)
Q Consensus 476 l~~~~~~~~~~iGiNC~~------------p~-------------~~----~~~l~~l~~~~~-~~pl~~ypNag~~~~~ 525 (581)
+......+++ ++|++. |. .+ ...++++++... ++|++. |.| +.
T Consensus 213 ~~~aga~~i~--~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg--~GG-I~-- 285 (345)
T 3oix_A 213 AAIFNXYPLT--FVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIG--TGG-VX-- 285 (345)
T ss_dssp HHHHTTSCCS--EEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEE--ESS-CC--
T ss_pred HHHhCCCceE--EEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEE--ECC-CC--
Confidence 5444455665 444430 00 01 245566665532 467654 222 11
Q ss_pred ccccccCCcCHHHHHHHHHHHHHcCCcEEeecCC---CchHHHHHHHHHHh
Q psy15811 526 VHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE---VTSYEIQQMRIMID 573 (581)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~w~~~G~~iiGGCCG---t~P~hI~al~~~l~ 573 (581)
++ +-+.+.+..|+..|.=+-+ .+|..++.|.+.+.
T Consensus 286 ---------s~----~da~~~l~aGAd~V~igra~~~~gP~~~~~i~~~L~ 323 (345)
T 3oix_A 286 ---------TG----RDAFEHILCGASMVQIGTALHQEGPQIFKRITKELX 323 (345)
T ss_dssp ---------SH----HHHHHHHHHTCSEEEESHHHHHHCTHHHHHHHHHHH
T ss_pred ---------Ch----HHHHHHHHhCCCEEEEChHHHhcChHHHHHHHHHHH
Confidence 11 2234555678888775544 36887777766654
No 200
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=63.69 E-value=23 Score=33.68 Aligned_cols=137 Identities=12% Similarity=0.095 Sum_probs=67.6
Q ss_pred HHHHHHHhCCCCEEEeccc-----CCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceE
Q psy15811 412 PNVEALVRAGVDYLALETI-----PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQA 486 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~-----p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~ 486 (581)
+.++.+.++|+|.|-+-++ +.... ..++.+++..++|++++--++ +.+++-..+ + .+++.
T Consensus 36 ~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~~~ipv~v~ggI~---------~~~~~~~~l-~---~Gad~ 100 (244)
T 1vzw_A 36 EAALAWQRSGAEWLHLVDLDAAFGTGDNR--ALIAEVAQAMDIKVELSGGIR---------DDDTLAAAL-A---TGCTR 100 (244)
T ss_dssp HHHHHHHHTTCSEEEEEEHHHHHTSCCCH--HHHHHHHHHCSSEEEEESSCC---------SHHHHHHHH-H---TTCSE
T ss_pred HHHHHHHHcCCCEEEEecCchhhcCCChH--HHHHHHHHhcCCcEEEECCcC---------CHHHHHHHH-H---cCCCE
Confidence 5567788899999976542 22222 445555555789999854332 244433333 1 24555
Q ss_pred EEECC---CCCccchHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHHHcCCcEEe-------e
Q psy15811 487 IGVNC---VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIG-------G 556 (581)
Q Consensus 487 iGiNC---~~p~~~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~~G~~iiG-------G 556 (581)
|.+.- ..|+.+..+++.+.. ..-+.+-+..|.+. .++|..... ...+.+++..+.|+..|. |
T Consensus 101 V~lg~~~l~~p~~~~~~~~~~g~---~~~~~l~~~~g~v~---~~g~~~~~~--~~~e~~~~~~~~G~~~i~~~~~~~~~ 172 (244)
T 1vzw_A 101 VNLGTAALETPEWVAKVIAEHGD---KIAVGLDVRGTTLR---GRGWTRDGG--DLYETLDRLNKEGCARYVVTDIAKDG 172 (244)
T ss_dssp EEECHHHHHCHHHHHHHHHHHGG---GEEEEEEEETTEEC---CSSSCCCCC--BHHHHHHHHHHTTCCCEEEEEC----
T ss_pred EEECchHhhCHHHHHHHHHHcCC---cEEEEEEccCCEEE---EcCcccCCC--CHHHHHHHHHhCCCCEEEEeccCccc
Confidence 55544 345545555444421 23455555444332 245643221 223334444556655322 1
Q ss_pred -cCCCchHHHHHHHHH
Q psy15811 557 -CCEVTSYEIQQMRIM 571 (581)
Q Consensus 557 -CCGt~P~hI~al~~~ 571 (581)
--|.+.+.++.+++.
T Consensus 173 ~~~g~~~~~~~~i~~~ 188 (244)
T 1vzw_A 173 TLQGPNLELLKNVCAA 188 (244)
T ss_dssp ---CCCHHHHHHHHHT
T ss_pred ccCCCCHHHHHHHHHh
Confidence 123455666666544
No 201
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=63.59 E-value=87 Score=32.89 Aligned_cols=108 Identities=11% Similarity=0.140 Sum_probs=71.5
Q ss_pred HHHHHHHHHHCCCcEEEEEccC---------------CHHHHHHHHHHHHhc---CCCcEEEEEEEcCC-----------
Q psy15811 154 HRPNVEALVRAGVDYLALETIP---------------AEKEALALVKLLREF---PGQKAWLSFSCKDD----------- 204 (581)
Q Consensus 154 ~~~q~~~l~~~gvD~l~~ET~~---------------~~~E~~aa~~a~~~~---~~~pv~isft~~~~----------- 204 (581)
-.+.++.|.++||-.+-+|-.. +.+|...=++++++. .+.+.+|---.+..
T Consensus 162 v~rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~d~vIiARTDA~~a~l~~s~~d~ 241 (433)
T 3eol_A 162 AFEIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGTPTLIVARTDAEAAKLLTSDIDE 241 (433)
T ss_dssp HHHHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCST
T ss_pred HHHHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCEEEEEEcCCccccccccCccc
Confidence 3467889999999999999543 356655544454421 15566665555531
Q ss_pred ----------CcCCCC-----CCHHHHHHHHHhhCCCCceEEEeCCC--ChhhHHHHHHHHHhhCCCCceEEecCC
Q psy15811 205 ----------THTSHG-----ELISSAVTSCLLANPDQIQAIGVNCV--RPSHVSTLVRCIKQSHPTVQTIVYPNK 263 (581)
Q Consensus 205 ----------g~l~~G-----~~~~~~~~~~~~~~~~~~~~vGvNC~--~p~~~~~~l~~l~~~~~~~p~~~~pna 263 (581)
.++..| ..+++++.++..... |+|+|-+-.. .++++..+.+.+... ...++.+|++.
T Consensus 242 rd~~fl~g~g~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~If~e~~~~~~eei~~f~~~v~~~-~P~~~L~~~~s 315 (433)
T 3eol_A 242 RDQPFVDYEAGRTAEGFYQVKNGIEPCIARAIAYAP-YCDLIWMETSKPDLAQARRFAEAVHKA-HPGKLLAYNCS 315 (433)
T ss_dssp TTGGGBCSSSCBCTTCCEEBCCSHHHHHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHHH-STTCCEEEECC
T ss_pred ccccceeccCcccccccccccCCHHHHHHHHHHHHh-cCCEEEEeCCCCCHHHHHHHHHHhccc-CCCcccccCCC
Confidence 122222 569999988765445 9999999664 688999999998753 23556666444
No 202
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=63.52 E-value=36 Score=35.31 Aligned_cols=65 Identities=18% Similarity=0.169 Sum_probs=43.7
Q ss_pred HHHHHHHHHCCCcEEEEEc-cCCHHHHHHHHHHHHhcC-CCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEE
Q psy15811 155 RPNVEALVRAGVDYLALET-IPAEKEALALVKLLREFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIG 232 (581)
Q Consensus 155 ~~q~~~l~~~gvD~l~~ET-~~~~~E~~aa~~a~~~~~-~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vG 232 (581)
.++++.++++|+|++.+-+ ..+.......++.+++.. ++||++- .+.+++++ ..+. ..|+++|.
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~----------~v~~~~~a-~~a~---~~Gad~I~ 220 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAG----------NIVTKEAA-LDLI---SVGADCLK 220 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEE----------EECSHHHH-HHHH---TTTCSEEE
T ss_pred HHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEc----------CCCcHHHH-HHHH---hcCCCEEE
Confidence 5567778899999998743 344456677778887653 7899871 12345544 3343 47899998
Q ss_pred e
Q psy15811 233 V 233 (581)
Q Consensus 233 v 233 (581)
+
T Consensus 221 v 221 (404)
T 1eep_A 221 V 221 (404)
T ss_dssp E
T ss_pred E
Confidence 8
No 203
>4ed9_A CAIB/BAIF family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: NHE; 1.95A {Brucella suis}
Probab=63.36 E-value=10 Score=39.39 Aligned_cols=73 Identities=19% Similarity=0.201 Sum_probs=48.2
Q ss_pred cccCCChHHHHHHHHHHHHhccccccccccccccccHhhcCCCHHHHHHHHHHHHHHHHHHhhhhcCCCccccccccccc
Q psy15811 35 VYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLL 114 (581)
Q Consensus 35 ~~~l~~Pe~v~~iH~~yl~AGAdiI~TnTf~a~~~~l~~~g~~~~~~~~i~~~av~lA~~a~~~~~~~~~~~~~~~~~~~ 114 (581)
.++|.+|+-.+.+++ |-+.|||+.+| |+ +..+.++|++.+.+++ . .
T Consensus 79 ~LDLk~~~Gr~~l~~--Lv~~ADV~ien-fr--Pg~~~rlGl~ye~L~~--------------~------------n--- 124 (385)
T 4ed9_A 79 TADFRTEEGRELVRR--LVAEADVVIEN-FK--LGGLDKYGLDYESLKA--------------I------------N--- 124 (385)
T ss_dssp ECCTTSHHHHHHHHH--HHHTCSEEEEC-CC--TTTTGGGTCSHHHHHH--------------H------------C---
T ss_pred EecCCCHHHHHHHHH--HHHhCCEEEEC-CC--ccHHHHhCCCHHHHHH--------------h------------C---
Confidence 466888886555443 33569999999 66 5667889998655432 1 1
Q ss_pred CCCeEEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHH
Q psy15811 115 TGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLI 151 (581)
Q Consensus 115 ~~~~~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~ 151 (581)
+.+|..||-.||. +|+|.+...+|.+.
T Consensus 125 --P~LIy~sisGfG~--------~GP~a~~~g~D~~~ 151 (385)
T 4ed9_A 125 --PQLIYCSITGFGH--------TGPYAERAGYDFMI 151 (385)
T ss_dssp --TTCEEEEEESSCS--------SSTTTTSCCCHHHH
T ss_pred --CCeEEEEEEeCCC--------CCCCCCCCCcHHHH
Confidence 6688889988886 34555545555543
No 204
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=63.36 E-value=57 Score=33.01 Aligned_cols=153 Identities=14% Similarity=0.138 Sum_probs=87.5
Q ss_pred CCCH---HHHHHHHHHHHHHHHhCCCCEEEeccc----------CC------------HHH---HHHHHHHHHhcCCCeE
Q psy15811 400 SMTE---ADLIAWHRPNVEALVRAGVDYLALETI----------PA------------EKE---ALALVKLLREFPGQKA 451 (581)
Q Consensus 400 ~~~~---~~~~~~~~~~~~~l~~~gvD~i~~ET~----------p~------------~~E---a~a~~~~~~~~~~~pv 451 (581)
.++. +++.+.|.+.++.+.++|.|.|=+=-- |. ... +..+++++++..+.||
T Consensus 133 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv 212 (340)
T 3gr7_A 133 EMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPL 212 (340)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCce
Confidence 4555 556778888888888999999854321 21 122 3456666665458899
Q ss_pred EEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECCC---------CCccchHHHHHHHhhCCCCeEEEeeCCCCC
Q psy15811 452 WLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV---------RPSHVSTLVRCIKQSHPTVQTIVYPNKGGV 522 (581)
Q Consensus 452 ~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~---------~p~~~~~~l~~l~~~~~~~pl~~ypNag~~ 522 (581)
.+-++..+ ....|.++++.+..+..+...+++.|-+-.. .+..-..+++.+++.. ++|+++--. .
T Consensus 213 ~vRls~~~--~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~-~iPVi~~Gg---I 286 (340)
T 3gr7_A 213 FVRISASD--YHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA-DIPTGAVGL---I 286 (340)
T ss_dssp EEEEESCC--CSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT-TCCEEEESS---C
T ss_pred EEEecccc--ccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc-CCcEEeeCC---C
Confidence 98887643 2234545444444333334456777666431 2233456778888776 688765321 1
Q ss_pred cccccccccCCcCHHHHHHHHHHHHHcC-CcEEeecCC--CchHHHHHHHHHHh
Q psy15811 523 WDSVHMKWLDTEDEYSILHYVPQWLEEG-VNIIGGCCE--VTSYEIQQMRIMID 573 (581)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~w~~~G-~~iiGGCCG--t~P~hI~al~~~l~ 573 (581)
. ++ +.+.+.++.| +.+|+=+=. .+|+-.+.+++.+.
T Consensus 287 ~-----------s~----e~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~~l~ 325 (340)
T 3gr7_A 287 T-----------SG----WQAEEILQNGRADLVFLGRELLRNPYWPYAAARELG 325 (340)
T ss_dssp C-----------CH----HHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHTT
T ss_pred C-----------CH----HHHHHHHHCCCeeEEEecHHHHhCchHHHHHHHHCC
Confidence 1 11 2345566666 666653222 35777777766654
No 205
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=63.12 E-value=21 Score=36.56 Aligned_cols=82 Identities=13% Similarity=0.050 Sum_probs=49.3
Q ss_pred cCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhC---CCCceEEEECCCCC------------ccchHHHHHHHhhCCC
Q psy15811 446 FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN---PDQIQAIGVNCVRP------------SHVSTLVRCIKQSHPT 510 (581)
Q Consensus 446 ~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~---~~~~~~iGiNC~~p------------~~~~~~l~~l~~~~~~ 510 (581)
..+.|+++++. |.++++.++.+.... ..++++|-||+..| +.+.++|+.++... +
T Consensus 124 ~~~~pvivsI~---------G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~-~ 193 (354)
T 4ef8_A 124 YGKKPLFLSMS---------GLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVY-P 193 (354)
T ss_dssp TTTCCEEEEEC---------CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHC-C
T ss_pred cCCCcEEEEec---------cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhh-C
Confidence 35789999983 444454444332222 23567888998533 44555677777766 6
Q ss_pred CeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHHHcC
Q psy15811 511 VQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEG 550 (581)
Q Consensus 511 ~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~~G 550 (581)
+|+.+.--.+ | +.+++.+.+....+.|
T Consensus 194 ~PV~vKi~p~---------~----d~~~~~~~a~~~~~~G 220 (354)
T 4ef8_A 194 HSFGVKMPPY---------F----DFAHFDAAAEILNEFP 220 (354)
T ss_dssp SCEEEEECCC---------C----SHHHHHHHHHHHHTCT
T ss_pred CCeEEEecCC---------C----CHHHHHHHHHHHHhCC
Confidence 8988765432 1 2446677766666666
No 206
>3n3m_A Orotidine 5'-phosphate decarboxylase; P. falciparum, 5'-monophosphate decarboxylase, 6- UMP, lyase; HET: PGE NUP; 1.47A {Plasmodium falciparum} SCOP: c.1.2.3 PDB: 2qaf_A* 3bar_A* 2q8z_A* 3mwa_A* 3n2m_A* 3bpw_A* 3n34_A* 3s9y_A* 2f84_A 2q8l_A 2za1_A* 2za2_A 2za3_A* 2zcg_A 3vi2_A*
Probab=62.55 E-value=10 Score=38.74 Aligned_cols=151 Identities=9% Similarity=-0.039 Sum_probs=79.0
Q ss_pred HHHHHHHhCCCCEE-----EecccCC--HHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCc
Q psy15811 412 PNVEALVRAGVDYL-----ALETIPA--EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 484 (581)
Q Consensus 412 ~~~~~l~~~gvD~i-----~~ET~p~--~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~ 484 (581)
..++.+.+ -|+++ +||.... +..++.+++.+++ .+.+|+.-+-+.| -|.+...+++.+ ....++
T Consensus 108 ~lvd~l~~-~v~~vKvG~~lf~~~G~~gv~~l~~l~~~l~~-~g~~VflDlK~~D-----IpnTv~~ya~~~--~~~lga 178 (342)
T 3n3m_A 108 YIINETNK-YALTFKMNFAFYIPYGSVGIDVLKNVFDYLYE-LNIPTILDMKIND-----IGNTVKNYRKFI--FEYLKS 178 (342)
T ss_dssp HHHHHHGG-GCSEEEEEGGGTSTTTHHHHHHHHHHHHHHHH-HTCCEEEEEEECC-----CHHHHHHHHHHH--HTTSCC
T ss_pred HHHHHhcC-cCcEEEecHHHHHhcCHHHHHHHHHHHHHHHh-CCCeEEEEeecCC-----cHHHHHHHHHHH--HHhcCC
Confidence 45555543 45664 2333221 2344445555665 5899998886654 355666666654 234578
Q ss_pred eEEEECC-CCCccchHHH-HHHHhhCCCCe-EEEeeCCCCCcccccccccCCcCH--HHHHHHHHHHHH-----cCCcEE
Q psy15811 485 QAIGVNC-VRPSHVSTLV-RCIKQSHPTVQ-TIVYPNKGGVWDSVHMKWLDTEDE--YSILHYVPQWLE-----EGVNII 554 (581)
Q Consensus 485 ~~iGiNC-~~p~~~~~~l-~~l~~~~~~~p-l~~ypNag~~~~~~~~~~~~~~~~--~~~~~~~~~w~~-----~G~~ii 554 (581)
+++-|+. .+++.+.+++ +........+. |...-|-+.. +... ......++ +..++.+.+|.+ .+.-..
T Consensus 179 D~vTVh~~~G~~~l~~a~~~~~~~~~~~v~vvt~tSs~~~~-dlq~-~~~~~~~~ly~~V~~~a~~~a~~~~~a~~~G~~ 256 (342)
T 3n3m_A 179 DSCTVNIYMGTNMLKDICYDEEKNKYYSAFVLVKTTNPDSA-IFQK-NLSLDNKQAYVIMAQEALNMSSYLNLEQNNEFI 256 (342)
T ss_dssp SEEEECCTTCSGGGGGTSEETTTTEECEEEEEEECCSTTTH-HHHT-TCEETTEEHHHHHHHHHHHHHHHTTTGGGTCCE
T ss_pred CEEEEcccCCHHHHHHHHHHHHhhcCCcEEEEEeCCCCCHH-HHHH-HhccCCChHHHHHHHHHHHHHHhcccccccCCc
Confidence 9999999 5666665543 32222111112 2223343321 1000 00001122 346778888861 123346
Q ss_pred eecCCCc-hHHHHHHHHHHh
Q psy15811 555 GGCCEVT-SYEIQQMRIMID 573 (581)
Q Consensus 555 GGCCGt~-P~hI~al~~~l~ 573 (581)
|==||.| |++++.||+.+.
T Consensus 257 GvV~GATsp~e~~~iR~~~p 276 (342)
T 3n3m_A 257 GFVVGANSYDEMNYIRTYFP 276 (342)
T ss_dssp EEEECTTCHHHHHHHHHHST
T ss_pred eEEECCCCHHHHHHHHHhCC
Confidence 6666554 999999998763
No 207
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=62.42 E-value=1.3e+02 Score=29.98 Aligned_cols=178 Identities=15% Similarity=0.138 Sum_probs=98.6
Q ss_pred CCceEEeccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecccCC---HHHHHHHHHHHHhcCC
Q psy15811 372 ISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA---EKEALALVKLLREFPG 448 (581)
Q Consensus 372 ~~v~VagsiGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l~~~gvD~i~~ET~p~---~~Ea~a~~~~~~~~~~ 448 (581)
+.++-+.-.+|.+ .+..+...+.++.|...++|+|-+-.-+. ..-...++..+++..+
T Consensus 22 ~~~~S~E~fPPk~-------------------~~~~~~l~~~~~~l~~l~p~fvsVT~gagg~~r~~t~~~a~~i~~~~g 82 (304)
T 3fst_A 22 QINVSFEFFPPRT-------------------SEMEQTLWNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTG 82 (304)
T ss_dssp CCEEEEEECCCCS-------------------HHHHHHHHHHHHHHHTTCCSEEEECCCTTSSCHHHHHHHHHHHHHHHC
T ss_pred CeEEEEEEcCCCC-------------------ccHHHHHHHHHHHHhcCCCCEEEEeeCCCCcchhHHHHHHHHHHHHhC
Confidence 3467777788853 12334455688889888999976654333 3333455666664469
Q ss_pred CeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEE-E----ECCCCCccchHHHHHHHhhC-CCCeEEEeeCCCCC
Q psy15811 449 QKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI-G----VNCVRPSHVSTLVRCIKQSH-PTVQTIVYPNKGGV 522 (581)
Q Consensus 449 ~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~i-G----iNC~~p~~~~~~l~~l~~~~-~~~pl~~ypNag~~ 522 (581)
+++++++||++.++ ..+.+.+..+.+..-.++.++ | -.-.+..+...+++.++..+ ..+-+..||.. .+
T Consensus 83 ~~~v~Hltc~~~~~----~~l~~~L~~~~~~GI~nILaLrGDpp~~~~~~~~~A~dLv~~ir~~~~f~IgvA~yPE~-Hp 157 (304)
T 3fst_A 83 LEAAPHLTCIDATP----DELRTIARDYWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEVADFDISVAAYPEV-HP 157 (304)
T ss_dssp CCEEEEEESTTSCH----HHHHHHHHHHHHTTCCEEEEECCCCC------CCCHHHHHHHHHHHCCCEEEEEECTTC-CT
T ss_pred CCeeEEeecCCCCH----HHHHHHHHHHHHCCCCEEEEecCCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEEeCCCc-CC
Confidence 99999999976433 234444444422211112221 0 00013345667777777653 12346677742 11
Q ss_pred ccccc--------------ccc---cCCcCHHHHHHHHHHHHHcC--CcEEeecCC-CchHHHHHHHHHHh
Q psy15811 523 WDSVH--------------MKW---LDTEDEYSILHYVPQWLEEG--VNIIGGCCE-VTSYEIQQMRIMID 573 (581)
Q Consensus 523 ~~~~~--------------~~~---~~~~~~~~~~~~~~~w~~~G--~~iiGGCCG-t~P~hI~al~~~l~ 573 (581)
...+. ..+ +.-.|.+.|.+++++..+.| +.|+-|=-. ++...++.+.+...
T Consensus 158 ~a~~~~~d~~~Lk~KvdAGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~~~~~G 228 (304)
T 3fst_A 158 EAKSAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKLADMTN 228 (304)
T ss_dssp TCSCHHHHHHHHHHHHHHTCCEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEECCCSCHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCccCCHHHHHHHHHHHHhcCCCCcEEEEecccCCHHHHHHHHHcCC
Confidence 11110 001 11135777888888777787 457776543 66778887765544
No 208
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=61.96 E-value=12 Score=36.94 Aligned_cols=101 Identities=17% Similarity=0.148 Sum_probs=65.4
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccc-CCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHH
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLAL-----ETI-PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAV 473 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~-----ET~-p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~ 473 (581)
.++.+. ++..++.+.+. ||.|++ |.. =+.+|-+.+++.+.+ .+||++... +.+..+++
T Consensus 15 ~iD~~~----l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~--rvpviaGvg---------~~~t~~ai 78 (283)
T 2pcq_A 15 RLDEEA----FRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP--RKPFLVGLM---------EETLPQAE 78 (283)
T ss_dssp CBCHHH----HHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC--SSCCEEEEC---------CSSHHHHH
T ss_pred CcCHHH----HHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh--CCcEEEeCC---------CCCHHHHH
Confidence 355544 45667777778 998765 221 126777788887776 789998872 34667777
Q ss_pred HHHHhhCCCCceEEEECC---CCC---ccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 474 TSCLLANPDQIQAIGVNC---VRP---SHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 474 ~~l~~~~~~~~~~iGiNC---~~p---~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
+..+.....+++++.+-. ..| +.+....+.+.. +.|+++|-+-
T Consensus 79 ~la~~A~~~Gadavlv~~P~y~~~~~~~~l~~~f~~va~---~lPiilYn~P 127 (283)
T 2pcq_A 79 GALLEAKAAGAMALLATPPRYYHGSLGAGLLRYYEALAE---KMPLFLYHVP 127 (283)
T ss_dssp HHHHHHHHHTCSEEEECCCCTTGGGTTTHHHHHHHHHHH---HSCEEEEECH
T ss_pred HHHHHHHhcCCCEEEecCCcCCCCCCHHHHHHHHHHHhc---CCCEEEEeCc
Confidence 766544556788777765 122 334445566666 5899999873
No 209
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=61.93 E-value=29 Score=37.29 Aligned_cols=65 Identities=15% Similarity=0.068 Sum_probs=35.9
Q ss_pred HHHHHHHCCCcEEEEEccC-------------C--HHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHH
Q psy15811 157 NVEALVRAGVDYLALETIP-------------A--EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL 221 (581)
Q Consensus 157 q~~~l~~~gvD~l~~ET~~-------------~--~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~ 221 (581)
.++.+.++|||+|.+ ++. . ..-....+..+++..++||+.+ |-..++. ++.+.+.
T Consensus 309 ~a~~l~~aGad~I~v-g~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~------GGI~~~~---di~kala 378 (514)
T 1jcn_A 309 QAKNLIDAGVDGLRV-GMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIAD------GGIQTVG---HVVKALA 378 (514)
T ss_dssp HHHHHHHHTCSEEEE-CSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEE------SCCCSHH---HHHHHHH
T ss_pred HHHHHHHcCCCEEEE-CCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEEE------CCCCCHH---HHHHHHH
Confidence 367788899999988 430 0 1222233333333237898872 3343444 4444432
Q ss_pred hhCCCCceEEEeCC
Q psy15811 222 LANPDQIQAIGVNC 235 (581)
Q Consensus 222 ~~~~~~~~~vGvNC 235 (581)
.|+++|++-=
T Consensus 379 ----~GAd~V~iG~ 388 (514)
T 1jcn_A 379 ----LGASTVMMGS 388 (514)
T ss_dssp ----TTCSEEEEST
T ss_pred ----cCCCeeeECH
Confidence 5688887754
No 210
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=61.82 E-value=1.4e+02 Score=30.09 Aligned_cols=227 Identities=12% Similarity=0.084 Sum_probs=140.3
Q ss_pred HHHHHHHHHHHHhccccccccccccccccHhh-cCCCHHHHHHHHHHHHHHHHHHhhhhcCCCcccccccccccCCCeEE
Q psy15811 42 EACVETHRDFIRAGADIIQSSCYQANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIET 120 (581)
Q Consensus 42 e~v~~iH~~yl~AGAdiI~TnTf~a~~~~l~~-~g~~~~~~~~i~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~~~~~V 120 (581)
+.+.+.-++-++.|-.-|.- |+.-+..++. .|-....-.-+..+|++..|+..- +.+|
T Consensus 66 d~l~~~~~~~~~lGi~~v~L--Fgv~~~~~KD~~gs~A~~~~g~v~rair~iK~~~p-------------------dl~v 124 (337)
T 1w5q_A 66 DQLLIEAEEWVALGIPALAL--FPVTPVEKKSLDAAEAYNPEGIAQRATRALRERFP-------------------ELGI 124 (337)
T ss_dssp HHHHHHHHHHHHTTCCEEEE--EECCCGGGCBSSCGGGGCTTSHHHHHHHHHHHHCT-------------------TSEE
T ss_pred HHHHHHHHHHHHCCCCEEEE--ecCCCcccCCcccCccCCCCChHHHHHHHHHHHCC-------------------CeEE
Confidence 55666677888999875443 5553333332 221111112378888888877653 3445
Q ss_pred Eee--cCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhc--CCCcEE
Q psy15811 121 AAS--IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF--PGQKAW 196 (581)
Q Consensus 121 ags--iGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~--~~~pv~ 196 (581)
..+ +-||...=+.|---. .+.+..|+-.+.+.+|+-..+++|+|+|.==-|-|- .+.++.+++.+. .+.|++
T Consensus 125 itDvcLc~YT~HGHcGil~~---~g~V~ND~Tl~~L~k~Als~A~AGADiVAPSdMMDG-rV~aIR~aLd~~G~~~v~Im 200 (337)
T 1w5q_A 125 ITDVCLCEFTTHGQCGILDD---DGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDG-RIGAIREALESAGHTNVRVM 200 (337)
T ss_dssp EEEECSTTTBTTCCSSCBCT---TSCBCHHHHHHHHHHHHHHHHHTTCSEEEECSCCTT-HHHHHHHHHHHTTCTTCEEE
T ss_pred EEeeecccCCCCCcceeeCC---CCcCccHHHHHHHHHHHHHHHHcCCCeEeccccccc-HHHHHHHHHHHCCCCCceee
Confidence 544 667776555442110 135889999999999999999999999987777776 567777777753 356554
Q ss_pred EEEEEc--C---------------C--C----cCCCCCCHHHHHHHHHhhCCCCceEEEeCCCChhhHHHHHHHHHhhCC
Q psy15811 197 LSFSCK--D---------------D--T----HTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHP 253 (581)
Q Consensus 197 isft~~--~---------------~--g----~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~~p~~~~~~l~~l~~~~~ 253 (581)
|.+.+ + - | +-++-..-.+|+..+......|+|.|.|-=+.|. +.+++.++.. .
T Consensus 201 -sYsaKyASafYGPFRdAa~Sap~f~~GDrktYQmdpaN~~EAlrE~~~Di~EGAD~vMVKPal~Y--LDIir~vk~~-~ 276 (337)
T 1w5q_A 201 -AYSAKYASAYYGPFRDAVGSASNLGKGNRATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPY--LDIVRRVKDE-F 276 (337)
T ss_dssp -EEEEEBCCGGGHHHHHC----------CGGGTSBCTTCSHHHHHHHHHHHHTTCSEEEEESCGGG--HHHHHHHHHH-H
T ss_pred -hhHHHHHHHHHHHHHHHhcCCcccCCCCccccCCCCCChHHHHHHHHhhHHhCCCEEEEcCCCch--HHHHHHHHHh-c
Confidence 54432 0 0 1 1223333345665544334578999999877653 5778888876 6
Q ss_pred CCceEEecCCC-ccccCCCchhhhccccCcccCCCCcccccccCCChHHHHHHHHHHHHH---HHhhc
Q psy15811 254 TVQTIVYPNKG-VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRG---HIETA 317 (581)
Q Consensus 254 ~~p~~~~pnag-~~~~dG~~gt~L~~~~g~~~~g~~lws~~~~~~~Pe~v~~vh~~yl~a---iI~Tn 317 (581)
++|+.+|--+| .-+ ++.. .. .+ | ++ ...+.+.+..|-+| +|.|.
T Consensus 277 ~~PvaaYqVSGEYAM--------ikaA--a~--~G--w-----iD-~~~v~Esl~~~kRAGAd~IiTY 324 (337)
T 1w5q_A 277 RAPTFVYQVSGEYAM--------HMGA--IQ--NG--W-----LA-ESVILESLTAFKRAGADGILTY 324 (337)
T ss_dssp CSCEEEEECHHHHHH--------HHHH--HH--TT--S-----SC-TTHHHHHHHHHHHHTCSEEEET
T ss_pred CCCEEEEEcCcHHHH--------HHHH--HH--cC--C-----cc-HHHHHHHHHHHHhcCCCEEeee
Confidence 89999995555 111 1110 01 11 3 45 66788888999999 77775
No 211
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=61.81 E-value=19 Score=35.37 Aligned_cols=50 Identities=16% Similarity=0.138 Sum_probs=37.0
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEE
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAW 452 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~ 452 (581)
.-+.+++.++-.+.++.|.+.|+|+|++-....- ..+++.+|+..++|++
T Consensus 46 ~ks~~~i~~~~~~~~~~L~~~g~~~IVIACNTa~---~~al~~lr~~~~iPvi 95 (269)
T 3ist_A 46 PRDKEEVAKFTWEMTNFLVDRGIKMLVIACNTAT---AAALYDIREKLDIPVI 95 (269)
T ss_dssp TSCHHHHHHHHHHHHHHHHHTTCSEEEECCHHHH---HHHHHHHHHHCSSCEE
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCCcc---HHHHHHHHHhcCCCEE
Confidence 4789999999999999999999999998754421 1235566654566654
No 212
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=61.52 E-value=9.3 Score=36.68 Aligned_cols=98 Identities=14% Similarity=0.170 Sum_probs=63.4
Q ss_pred HHHHHHHHHCCCcEEEE-----EccCCHHHHHHHHHHHHhc--CCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCC
Q psy15811 155 RPNVEALVRAGVDYLAL-----ETIPAEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQ 227 (581)
Q Consensus 155 ~~q~~~l~~~gvD~l~~-----ET~~~~~E~~aa~~a~~~~--~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~ 227 (581)
.+.++.+.++|+|.+-+ -.+|++..-..+++.+|+. +++|+-+-+.+.+.+ ..+..+.+ .|
T Consensus 20 ~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~---------~~i~~~~~---aG 87 (228)
T 3ovp_A 20 GAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPE---------QWVKPMAV---AG 87 (228)
T ss_dssp HHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGG---------GGHHHHHH---HT
T ss_pred HHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHH---------HHHHHHHH---cC
Confidence 45677888899999877 3445555555677777765 678888877765432 22333332 57
Q ss_pred ceEEEeCCCChhhHHHHHHHHHhhCCCCceEEecCCC
Q psy15811 228 IQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264 (581)
Q Consensus 228 ~~~vGvNC~~p~~~~~~l~~l~~~~~~~p~~~~pnag 264 (581)
++.|-+=+-..+++.+.++.+++.+.+.-+.+.|+..
T Consensus 88 ad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t~ 124 (228)
T 3ovp_A 88 ANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTS 124 (228)
T ss_dssp CSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTTSC
T ss_pred CCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCCCC
Confidence 7887776643457788888888753444455555554
No 213
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=61.33 E-value=1.2e+02 Score=29.94 Aligned_cols=169 Identities=16% Similarity=0.175 Sum_probs=86.8
Q ss_pred CceEEeccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec---ccCC------HHHHHHHHHHH
Q psy15811 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE---TIPA------EKEALALVKLL 443 (581)
Q Consensus 373 ~v~VagsiGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l~~~gvD~i~~E---T~p~------~~Ea~a~~~~~ 443 (581)
+.+|.|=+--++++|++|..| .+.+.+. ++++.+.+.|+|+|=+- |-|. ..|..-++..+
T Consensus 5 ~~~imgilN~TpDSFsdgg~~-------~~~~~a~----~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi 73 (280)
T 1eye_A 5 PVQVMGVLNVTDDSFSDGGCY-------LDLDDAV----KHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVV 73 (280)
T ss_dssp CCEEEEEEECSCCTTCSSCCC-------CSHHHHH----HHHHHHHHTTCSEEEEECC--------------HHHHHHHH
T ss_pred CcEEEEEEeCCCCCcCCCccc-------CCHHHHH----HHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHH
Confidence 467888888888888887544 3444444 56677778999997444 3333 45555555555
Q ss_pred Hhc--CCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECCCCCc-cchHHHHHHHhhCCCCeEEEeeCCC
Q psy15811 444 REF--PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS-HVSTLVRCIKQSHPTVQTIVYPNKG 520 (581)
Q Consensus 444 ~~~--~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~~p~-~~~~~l~~l~~~~~~~pl~~ypNag 520 (581)
+.. .++| +|+-. ... +++++..+. ++. -||-++-. ....+++.++.. +.|+++.++.|
T Consensus 74 ~~l~~~~~p--iSIDT---------~~~-~va~aAl~a---Ga~--iINdvsg~~~d~~m~~~~a~~--~~~vVlmh~~G 134 (280)
T 1eye_A 74 KELAAQGIT--VSIDT---------MRA-DVARAALQN---GAQ--MVNDVSGGRADPAMGPLLAEA--DVPWVLMHWRA 134 (280)
T ss_dssp HHHHHTTCC--EEEEC---------SCH-HHHHHHHHT---TCC--EEEETTTTSSCTTHHHHHHHH--TCCEEEECCCC
T ss_pred HHhhcCCCE--EEEeC---------CCH-HHHHHHHHc---CCC--EEEECCCCCCCHHHHHHHHHh--CCeEEEEcCCC
Confidence 432 2555 45521 112 333333212 334 46663322 233455555655 58999999987
Q ss_pred CCcccccccccCCcC-----HHHHHHHHHHHHHcCCc---EE---eecCCCchHHHHHHHHHH
Q psy15811 521 GVWDSVHMKWLDTED-----EYSILHYVPQWLEEGVN---II---GGCCEVTSYEIQQMRIMI 572 (581)
Q Consensus 521 ~~~~~~~~~~~~~~~-----~~~~~~~~~~w~~~G~~---ii---GGCCGt~P~hI~al~~~l 572 (581)
.+.+.....-.| .+ ...+.+.+....+.|+. || |=--+-+.+|=-++-+.+
T Consensus 135 ~p~tm~~~~~~y-~dv~~~v~~~l~~~i~~a~~~Gi~~~~IilDPg~Gf~k~~~~n~~ll~~l 196 (280)
T 1eye_A 135 VSADTPHVPVRY-GNVVAEVRADLLASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAILHAL 196 (280)
T ss_dssp SCTTCTTSCCCC-SSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTH
T ss_pred CCcchhhcCcch-hHHHHHHHHHHHHHHHHHHHcCCChhhEEEECCCCcccCHHHHHHHHHHH
Confidence 654332110001 11 23455666677788885 54 311344564444443333
No 214
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=61.18 E-value=80 Score=32.43 Aligned_cols=136 Identities=14% Similarity=0.128 Sum_probs=79.8
Q ss_pred ChHHHHHHHHHHHHhccccccccccccccccHh--hcCCCHHHHHHHHHHHHHHHHHHhhhhcCCCcccccccccccCCC
Q psy15811 40 EPEACVETHRDFIRAGADIIQSSCYQANVDNLT--KLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH 117 (581)
Q Consensus 40 ~Pe~v~~iH~~yl~AGAdiI~TnTf~a~~~~l~--~~g~~~~~~~~i~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~~~ 117 (581)
+++-++...+.-..+|.+.|. +|.+..+... .++.+.+++.+.....++.|++.- . .
T Consensus 85 ~~~di~~a~~al~~ag~~~v~--if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g--------------~-----~ 143 (370)
T 3rmj_A 85 IERDIRQAGEAVAPAPKKRIH--TFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYT--------------D-----D 143 (370)
T ss_dssp SHHHHHHHHHHHTTSSSEEEE--EEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTC--------------S-----C
T ss_pred CHHHHHHHHHHHhhCCCCEEE--EEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC--------------C-----E
Confidence 344444443333346777654 4555444333 367777777666666666664321 1 2
Q ss_pred eEEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEEE-ccC--CHHHHHHHHHHHHhc-CCC
Q psy15811 118 IETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE-TIP--AEKEALALVKLLREF-PGQ 193 (581)
Q Consensus 118 ~~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~E-T~~--~~~E~~aa~~a~~~~-~~~ 193 (581)
+.+. + ||. ...+. +++.+.++.+.+.|+|.|-+= |+. ...++...++.+++. ++.
T Consensus 144 v~~~----~---------ed~----~r~~~----~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~ 202 (370)
T 3rmj_A 144 VEFS----C---------EDA----LRSEI----DFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNG 202 (370)
T ss_dssp EEEE----E---------ETG----GGSCH----HHHHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTG
T ss_pred EEEe----c---------CCC----CccCH----HHHHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCc
Confidence 2111 1 111 12333 567777888889999998554 543 788999999998853 321
Q ss_pred c-EEEEEEEcCCCcCCCCCCHHHHHHHHH
Q psy15811 194 K-AWLSFSCKDDTHTSHGELISSAVTSCL 221 (581)
Q Consensus 194 p-v~isft~~~~g~l~~G~~~~~~~~~~~ 221 (581)
+ +.++|-+=++ .|..+..++.++.
T Consensus 203 ~~~~l~~H~Hnd----~GlAvAN~laAv~ 227 (370)
T 3rmj_A 203 GKVVWSAHCHND----LGLAVANSLAALK 227 (370)
T ss_dssp GGSEEEEECBCT----TSCHHHHHHHHHH
T ss_pred CceEEEEEeCCC----CChHHHHHHHHHH
Confidence 1 6677877654 5777777776664
No 215
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=61.12 E-value=51 Score=32.91 Aligned_cols=91 Identities=19% Similarity=0.162 Sum_probs=54.4
Q ss_pred hCCCCEEEecccCCHHHHH---HHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECCCCCc
Q psy15811 419 RAGVDYLALETIPAEKEAL---ALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 495 (581)
Q Consensus 419 ~~gvD~i~~ET~p~~~Ea~---a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~~p~ 495 (581)
+.|+++++-|.+..-.... ...+.+....+.|+++.+.-+ +-+.+.++++.+ ... .++|-|||..|.
T Consensus 26 ~~G~gli~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~QL~g~------~~~~~~~aa~~a---~~~-~d~Iein~gcP~ 95 (318)
T 1vhn_A 26 EWGADFAFSEMVSAKGFLMNSQKTEELLPQPHERNVAVQIFGS------EPNELSEAARIL---SEK-YKWIDLNAGCPV 95 (318)
T ss_dssp TTTCCCEECSCEEHHHHHTTCHHHHHHSCCTTCTTEEEEEECS------CHHHHHHHHHHH---TTT-CSEEEEEECCCC
T ss_pred HHCcCEEEeCCEEEcccccCCHhHHHhhhCcCCCeEEEEeCCC------CHHHHHHHHHHH---HHh-CCEEEEECCCCc
Confidence 4689999999765322111 111222222578999999622 123455555554 455 899999995553
Q ss_pred -----------------cchHHHHHHHhhCCCCeEEEeeCCC
Q psy15811 496 -----------------HVSTLVRCIKQSHPTVQTIVYPNKG 520 (581)
Q Consensus 496 -----------------~~~~~l~~l~~~~~~~pl~~ypNag 520 (581)
.+..+++.++... +.|+++.-..|
T Consensus 96 ~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~G 136 (318)
T 1vhn_A 96 RKVVKEGAGGALLKDLRHFRYIVRELRKSV-SGKFSVKTRLG 136 (318)
T ss_dssp HHHHHTTCGGGGGSCHHHHHHHHHHHHHHC-SSEEEEEEESC
T ss_pred HhcCCCCcccchhhCHHHHHHHHHHHHHhh-CCCEEEEecCC
Confidence 2334566676655 58998887664
No 216
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=60.97 E-value=48 Score=32.42 Aligned_cols=151 Identities=13% Similarity=0.022 Sum_probs=88.3
Q ss_pred HHHhC--CCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCC---------CcCCCCCcHHHHHHHHHhhCCCCc
Q psy15811 416 ALVRA--GVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDD---------THTSHGELISSAVTSCLLANPDQI 484 (581)
Q Consensus 416 ~l~~~--gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~---------~~l~~G~~~~~~~~~l~~~~~~~~ 484 (581)
.+.+- .|.+=+ +|....+....+..++ .+..|++++-..+. +.|..|.+.++....+......-+
T Consensus 49 ~i~~LP~pvT~Ai---~P~~p~~~~~a~~A~~-~G~EvllHlPMep~~~p~~~~gp~~L~~~~s~~ei~~~l~~al~~vP 124 (261)
T 2qv5_A 49 AIRDLPPEVTLGF---AASGNSLQRWMQDARR-EGHEILLQIPLEPFGYPGTNPGPDTLLAGDPAKVNIDRLHRSMAKIT 124 (261)
T ss_dssp HHHHSCTTSEEEE---ETTCSSHHHHHHHHHH-HTCCEEEEEEECCTTTTTSCCCTTCBCTTSCHHHHHHHHHHHHTTCC
T ss_pred HHHhCCCCeEEEE---CCCCCCHHHHHHHHHH-CCCEEEEECCCCCCCCCCCCCCcCcCcCCCCHHHHHHHHHHHHHHCC
Confidence 44443 344444 4555555666667776 48889999976532 336667777777776655455556
Q ss_pred eEEEECC-C------CCccchHHHHHHHhhCCCCeEEEeeCC------------CCCcccccccccCC-cCHHHHH----
Q psy15811 485 QAIGVNC-V------RPSHVSTLVRCIKQSHPTVQTIVYPNK------------GGVWDSVHMKWLDT-EDEYSIL---- 540 (581)
Q Consensus 485 ~~iGiNC-~------~p~~~~~~l~~l~~~~~~~pl~~ypNa------------g~~~~~~~~~~~~~-~~~~~~~---- 540 (581)
.++|+|. . +...|..+++.|++.+ ..++..--+ |.++-. ...|.++ .+...+.
T Consensus 125 ~a~GvnNHmGS~~T~~~~~M~~vm~~L~~~g--L~FlDS~Ts~~S~a~~~A~~~gvp~~~-rdvFLD~~~~~~~I~~qL~ 201 (261)
T 2qv5_A 125 NYTGVMNYLGGRFLAEQSALEPVMRDIGKRG--LLFLDDGSSAQSLSGGIAKAISAPQGF-ADVLLDGEVTEASILRKLD 201 (261)
T ss_dssp CCSEEEEEECTTGGGCHHHHHHHHHHHHHTT--CEEEECSCCTTCCHHHHHHHHTCCEEE-CSEETTSSCSHHHHHHHHH
T ss_pred CcEEEecccccchhcCHHHHHHHHHHHHHCC--CEEEcCCCCcccHHHHHHHHcCCCeEE-eeeecCCCCCHHHHHHHHH
Confidence 7889997 2 3455777788888753 333322211 111111 1234443 2344433
Q ss_pred HHHHHHHHcC-CcEEeecCCCchHHHHHHHHHHhccc
Q psy15811 541 HYVPQWLEEG-VNIIGGCCEVTSYEIQQMRIMIDEFN 576 (581)
Q Consensus 541 ~~~~~w~~~G-~~iiGGCCGt~P~hI~al~~~l~~~~ 576 (581)
+.+..-.+.| +..||= ..|+-|++|.+.+...+
T Consensus 202 ~a~~~Ar~~G~AIaIGh---p~p~Ti~aL~~~~~~l~ 235 (261)
T 2qv5_A 202 DLERIARRNGQAIGVAS---AFDESIAAISKWSREAG 235 (261)
T ss_dssp HHHHHHHHHSEEEEEEE---CCHHHHHHHHHHHHHGG
T ss_pred HHHHHHHhcCcEEEEeC---CCHHHHHHHHHHhhhhh
Confidence 3334445667 555664 79999999998876544
No 217
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=60.85 E-value=1.4e+02 Score=30.03 Aligned_cols=227 Identities=11% Similarity=0.069 Sum_probs=142.3
Q ss_pred HHHHHHHHHHHHhccccccccccccccc-----cHhhcCCCHHHHHHHHHHHHHHHHHHhhhhcCCCcccccccccccCC
Q psy15811 42 EACVETHRDFIRAGADIIQSSCYQANVD-----NLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG 116 (581)
Q Consensus 42 e~v~~iH~~yl~AGAdiI~TnTf~a~~~-----~l~~~g~~~~~~~~i~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~~ 116 (581)
+.+.+.-++-++.|-.-|.- |+..+. ...+..+++ .-+..+|++..|+..-
T Consensus 69 d~l~~~~~~~~~lGi~~v~L--Fgv~~~~~~KD~~gs~A~~~---~g~v~rair~iK~~~p------------------- 124 (342)
T 1h7n_A 69 NRLKDYLKPLVAKGLRSVIL--FGVPLIPGTKDPVGTAADDP---AGPVIQGIKFIREYFP------------------- 124 (342)
T ss_dssp HHHHHHHHHHHHTTCCEEEE--EEECCSTTCCBTTCGGGGCT---TSHHHHHHHHHHHHCT-------------------
T ss_pred HHHHHHHHHHHHCCCCEEEE--ecccCccCCCCccccccCCC---CChHHHHHHHHHHHCC-------------------
Confidence 56677778888999875443 444221 111111221 2378888888877643
Q ss_pred CeEEEe--ecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhc---C
Q psy15811 117 HIETAA--SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF---P 191 (581)
Q Consensus 117 ~~~Vag--siGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~---~ 191 (581)
+.+|.. ++-||...-+.|---. .+.+..++-.+.+.+|+-..+++|+|+|.==-|-|- .+.++.+++.+. .
T Consensus 125 dl~VitDvcLc~YT~HGHcGil~~---~g~V~ND~Tl~~Lak~Als~A~AGAdiVAPSdMMDG-rV~aIR~aLd~~G~~~ 200 (342)
T 1h7n_A 125 ELYIICDVCLCEYTSHGHCGVLYD---DGTINRERSVSRLAAVAVNYAKAGAHCVAPSDMIDG-RIRDIKRGLINANLAH 200 (342)
T ss_dssp TSEEEEEECSTTTBTTCCSSCBCT---TSSBCHHHHHHHHHHHHHHHHHHTCSEEEECCCCTT-HHHHHHHHHHHTTCTT
T ss_pred CeEEEEeeecccccCCCceeEECC---CCcCccHHHHHHHHHHHHHHHHcCCCeeeccccccc-HHHHHHHHHHHCCCcc
Confidence 344554 4667766544432100 145889999999999999999999999987777776 567777888753 2
Q ss_pred CCcEEEEEEEc--C-----------------C--CcCCCCCCHHHHHHHHHhhCCCCceEEEeCCCChhhHHHHHHHHHh
Q psy15811 192 GQKAWLSFSCK--D-----------------D--THTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ 250 (581)
Q Consensus 192 ~~pv~isft~~--~-----------------~--g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~~p~~~~~~l~~l~~ 250 (581)
+.|+ +|.+.+ + | .+-++-..-.+++..+......|+|.|.|-=+.|. +.+++.++.
T Consensus 201 ~v~I-msYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPal~Y--LDIi~~vk~ 277 (342)
T 1h7n_A 201 KTFV-LSYAAKFSGNLYGPFRDAACSAPSNGDRKCYQLPPAGRGLARRALERDMSEGADGIIVKPSTFY--LDIMRDASE 277 (342)
T ss_dssp TCEE-EEEEEEBCSSCCHHHHHHHTCCCSSSCSTTTSBCTTCHHHHHHHHHHHHHTTCSEEEEESSGGG--HHHHHHHHH
T ss_pred CceE-eechHHHhHHhhHHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCCeEEEecCccH--HHHHHHHHH
Confidence 3454 466543 1 1 12234455667776654444678999999877653 577888887
Q ss_pred hCCCCceEEecCCCccccCCCchhhhccccCcccCCCCcccccccCCChHHHHHHHHHHHHH---HHhhc
Q psy15811 251 SHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRG---HIETA 317 (581)
Q Consensus 251 ~~~~~p~~~~pnag~~~~dG~~gt~L~~~~g~~~~g~~lws~~~~~~~Pe~v~~vh~~yl~a---iI~Tn 317 (581)
..+++|+.+|--+| .++ .++.. .. .+ | ++....+.+.+..|.+| +|.|.
T Consensus 278 ~~p~~P~aaYqVSG------EYA-MikaA--a~--~G--w-----iD~~~~v~Esl~~~kRAGAd~IiTY 329 (342)
T 1h7n_A 278 ICKDLPICAYHVSG------EYA-MLHAA--AE--KG--V-----VDLKTIAFESHQGFLRAGARLIITY 329 (342)
T ss_dssp HTTTSCEEEEECHH------HHH-HHHHH--HH--TT--S-----SCHHHHHHHHHHHHHHTTCSEEEET
T ss_pred hccCCCeEEEEcCc------HHH-HHHHH--HH--cC--C-----ccHHHHHHHHHHHHHhcCCCEEEee
Confidence 63489999995555 110 01000 00 11 3 45666788888999998 66665
No 218
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=60.63 E-value=1.3e+02 Score=31.69 Aligned_cols=109 Identities=17% Similarity=0.145 Sum_probs=72.7
Q ss_pred HHHHHHHHHHCCCcEEEEEccC---------------CHHHHHHHHHHHHhc---CCCcEEEEEEEcCCC----------
Q psy15811 154 HRPNVEALVRAGVDYLALETIP---------------AEKEALALVKLLREF---PGQKAWLSFSCKDDT---------- 205 (581)
Q Consensus 154 ~~~q~~~l~~~gvD~l~~ET~~---------------~~~E~~aa~~a~~~~---~~~pv~isft~~~~g---------- 205 (581)
-.+.++.|+++||-.+-+|-.. +.+|...=++++++. .+.|.+|---.+...
T Consensus 169 v~~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~IiARTDa~~a~l~~s~~d~ 248 (439)
T 3i4e_A 169 AFELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGTPTVLVARTDAEAADLITSDIDD 248 (439)
T ss_dssp HHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCCT
T ss_pred HHHHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCccccccccccccc
Confidence 3467888999999999999543 456665555555421 256767666565321
Q ss_pred ---------cCCCC-----CCHHHHHHHHHhhCCCCceEEEeCC-C-ChhhHHHHHHHHHhhCCCCceEEecCCC
Q psy15811 206 ---------HTSHG-----ELISSAVTSCLLANPDQIQAIGVNC-V-RPSHVSTLVRCIKQSHPTVQTIVYPNKG 264 (581)
Q Consensus 206 ---------~l~~G-----~~~~~~~~~~~~~~~~~~~~vGvNC-~-~p~~~~~~l~~l~~~~~~~p~~~~pnag 264 (581)
+++.| ..+++++.++..... |+|+|-+-. . .++++..+.+.+... ...++.+|+..+
T Consensus 249 ~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~-GAD~if~E~~~~~~eei~~f~~~v~~~-~P~~~l~~~~sP 321 (439)
T 3i4e_A 249 NDKPYLTGERTVEGFFRTKPGLEQAISRGLAYAP-YADLIWCETGKPDLEYAKKFAEAIHKQ-FPGKLLSYNCSP 321 (439)
T ss_dssp TTGGGEEEEECTTSCEEECCSHHHHHHHHHHHTT-TCSEEEECCSSCCHHHHHHHHHHHHHH-STTCEEEEECCS
T ss_pred ccchhhcccCcccccccccCCHHHHHHHHHHHHh-hCCEEEecCCCCCHHHHHHHHHHhccc-CCceEEeeCCCC
Confidence 11222 568999988866556 999999955 3 789999999998863 235566665444
No 219
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=60.57 E-value=1.5e+02 Score=30.04 Aligned_cols=141 Identities=16% Similarity=0.119 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHHhCCCCEEE-ecccCC-----------HHHHHHHHHHHH-hc-C----CCeEEEEEEEcCCCcCCCCC
Q psy15811 406 LIAWHRPNVEALVRAGVDYLA-LETIPA-----------EKEALALVKLLR-EF-P----GQKAWLSFSCKDDTHTSHGE 467 (581)
Q Consensus 406 ~~~~~~~~~~~l~~~gvD~i~-~ET~p~-----------~~Ea~a~~~~~~-~~-~----~~pv~iSft~~~~~~l~~G~ 467 (581)
+.+...+-++...++|+|.|. +++... ..=.+.+++.++ +. + +.|++ .|+|.. +.
T Consensus 195 l~~~~~~~~~~~i~aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i-~~~~G~-~~----- 267 (367)
T 1r3s_A 195 LTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMI-IFAKDG-HF----- 267 (367)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEE-EEETTC-GG-----
T ss_pred HHHHHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeE-EEcCCc-HH-----
Confidence 334444555566679999984 554332 233445566666 43 1 57865 456542 11
Q ss_pred cHHHHHHHHHhhCCCCceEEEECCCCCccchHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHH
Q psy15811 468 LISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWL 547 (581)
Q Consensus 468 ~~~~~~~~l~~~~~~~~~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~ 547 (581)
.+..+ ...++++|++-.. -.+..+-+. .+.+ +.++-|--. . .. ..+++.+.+.+++.+
T Consensus 268 ----~l~~l---~~~g~d~i~~d~~--~dl~~a~~~---~g~~--~~l~Gnldp----~---~L-~gt~e~i~~~v~~~l 325 (367)
T 1r3s_A 268 ----ALEEL---AQAGYEVVGLDWT--VAPKKAREC---VGKT--VTLQGNLDP----C---AL-YASEEEIGQLVKQML 325 (367)
T ss_dssp ----GHHHH---TTSSCSEEECCTT--SCHHHHHHH---HCSS--SEEEEEECG----G---GG-GSCHHHHHHHHHHHH
T ss_pred ----HHHHH---HhcCCCEEEeCCC--CCHHHHHHH---cCCC--eEEEeCCCh----H---Hh-cCCHHHHHHHHHHHH
Confidence 22344 3446777776431 112222222 2322 344545321 1 11 235778888888887
Q ss_pred Hc-C--CcEEeecCC----CchHHHHHHHHHHhcc
Q psy15811 548 EE-G--VNIIGGCCE----VTSYEIQQMRIMIDEF 575 (581)
Q Consensus 548 ~~-G--~~iiGGCCG----t~P~hI~al~~~l~~~ 575 (581)
+. | --|++--|| |.|++++++.+.++++
T Consensus 326 ~~~g~~g~I~~~ghgi~~~~p~env~a~v~~v~~~ 360 (367)
T 1r3s_A 326 DDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKH 360 (367)
T ss_dssp HHHCSSSEEEEESSCCCTTCCHHHHHHHHHHHHHH
T ss_pred HHhCCCCeeecCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 64 4 567776676 5679999999988764
No 220
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=59.86 E-value=40 Score=31.71 Aligned_cols=86 Identities=17% Similarity=0.259 Sum_probs=53.8
Q ss_pred HHHHHHHHHHCCCcEEEEE-----ccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCc
Q psy15811 154 HRPNVEALVRAGVDYLALE-----TIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 228 (581)
Q Consensus 154 ~~~q~~~l~~~gvD~l~~E-----T~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~ 228 (581)
..+.++.+.++|+|++=+= .++++......++.+++..+.|+.+-+.+.+ ..+.+..+. ..++
T Consensus 25 ~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~l~vnd---------~~~~v~~~~---~~Ga 92 (230)
T 1rpx_A 25 LGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIVE---------PDQRVPDFI---KAGA 92 (230)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEESSS---------HHHHHHHHH---HTTC
T ss_pred HHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhccCCcEEEEEEecC---------HHHHHHHHH---HcCC
Confidence 4567888899999987552 2233322234555666554678887776543 334555554 3678
Q ss_pred eEEEeCCC--ChhhHHHHHHHHHhh
Q psy15811 229 QAIGVNCV--RPSHVSTLVRCIKQS 251 (581)
Q Consensus 229 ~~vGvNC~--~p~~~~~~l~~l~~~ 251 (581)
++|-+-+. .++++.+.++.+++.
T Consensus 93 d~v~vh~~~~~~~~~~~~~~~~~~~ 117 (230)
T 1rpx_A 93 DIVSVHCEQSSTIHLHRTINQIKSL 117 (230)
T ss_dssp SEEEEECSTTTCSCHHHHHHHHHHT
T ss_pred CEEEEEecCccchhHHHHHHHHHHc
Confidence 88877776 555666777777663
No 221
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=59.65 E-value=37 Score=34.14 Aligned_cols=101 Identities=16% Similarity=0.114 Sum_probs=56.5
Q ss_pred HHHHHCCCcEEEEEccCCH---------------------------HHHHHHHHHHHhc-CCCcEEEEEEEcCCCcCCCC
Q psy15811 159 EALVRAGVDYLALETIPAE---------------------------KEALALVKLLREF-PGQKAWLSFSCKDDTHTSHG 210 (581)
Q Consensus 159 ~~l~~~gvD~l~~ET~~~~---------------------------~E~~aa~~a~~~~-~~~pv~isft~~~~g~l~~G 210 (581)
+.+.+.|+.++..||++-- ......++.+++. .+.|+.+|+...++ +...
T Consensus 72 ~~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~~~~g~~~~~~~~~~~~~~~~~~v~i~~~~~--~~i~ 149 (336)
T 1f76_A 72 DALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKD--TPVE 149 (336)
T ss_dssp HHHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCCCBCCHHHHHHHHHHCCCCSEEEEEECCCTT--SCGG
T ss_pred HHHHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCCCCcCHHHHHHHHHhcccCCcEEEEecCCCC--Cccc
Confidence 4456889999988987521 1123344445543 25688888743221 1111
Q ss_pred CCHHHHHHHHHhhCCCCceEEEeCCCChh-----------hHHHHHHHHHhhC--------CCCceEEecC
Q psy15811 211 ELISSAVTSCLLANPDQIQAIGVNCVRPS-----------HVSTLVRCIKQSH--------PTVQTIVYPN 262 (581)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~vGvNC~~p~-----------~~~~~l~~l~~~~--------~~~p~~~~pn 262 (581)
..+++....+..... ++++|-+|+++|. .+.++++.+++.. .+.||+++-+
T Consensus 150 ~~~~~~~~aa~~~~~-g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~ 219 (336)
T 1f76_A 150 QGKDDYLICMEKIYA-YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIA 219 (336)
T ss_dssp GTHHHHHHHHHHHGG-GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECC
T ss_pred ccHHHHHHHHHHHhc-cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEec
Confidence 235555444432223 7899999987553 2345666666531 2688888743
No 222
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=58.76 E-value=56 Score=36.73 Aligned_cols=105 Identities=10% Similarity=0.113 Sum_probs=64.6
Q ss_pred HHHHHHHhCCCCEEE-ecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcC---CCcCCCCCcHHHHHHHHHhhCCCCceEE
Q psy15811 412 PNVEALVRAGVDYLA-LETIPAEKEALALVKLLREFPGQKAWLSFSCKD---DTHTSHGELISSAVTSCLLANPDQIQAI 487 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~-~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~---~~~l~~G~~~~~~~~~l~~~~~~~~~~i 487 (581)
.-++...++|+|.|- |-...++..++..++.+++ .+..+...+++-. +.. ....+++.+++.+......+++.|
T Consensus 201 ~~i~~a~~~Gvd~irIf~s~n~l~~l~~~i~~ak~-~G~~v~~~i~~~~d~~dp~-r~~~~~e~~~~~a~~l~~~Ga~~I 278 (718)
T 3bg3_A 201 KFCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGS-AGGVVEAAISYTGDVADPS-RTKYSLQYYMGLAEELVRAGTHIL 278 (718)
T ss_dssp HHHHHHHHHTCCEEEEECSSCCHHHHHHHHHHHHT-TTSEEEEEEECCSCTTCTT-CCTTCHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHhcCcCEEEEEecHHHHHHHHHHHHHHHH-cCCeEEEEEEeeccccCCC-CCCCCHHHHHHHHHHHHHcCCCEE
Confidence 344555667999973 3345568888888888887 4666655444321 111 112244444443332234466777
Q ss_pred EECC----CCCccchHHHHHHHhhCCCCeEEEeeC
Q psy15811 488 GVNC----VRPSHVSTLVRCIKQSHPTVQTIVYPN 518 (581)
Q Consensus 488 GiNC----~~p~~~~~~l~~l~~~~~~~pl~~ypN 518 (581)
.|-- ..|..+..+++.++...++.|+.+...
T Consensus 279 ~l~DT~G~~~P~~v~~lV~~lk~~~p~~~I~~H~H 313 (718)
T 3bg3_A 279 CIKDMAGLLKPTACTMLVSSLRDRFPDLPLHIHTH 313 (718)
T ss_dssp EEECTTSCCCHHHHHHHHHHHHHHSTTCCEEEECC
T ss_pred EEcCcCCCcCHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 7765 368889999999988754578877764
No 223
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=58.35 E-value=1.4e+02 Score=29.24 Aligned_cols=149 Identities=8% Similarity=0.022 Sum_probs=87.6
Q ss_pred HHHHHHHhCCCCEEEecc------------c-CCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHh
Q psy15811 412 PNVEALVRAGVDYLALET------------I-PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLL 478 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET------------~-p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~ 478 (581)
.-++.+.++|+|+|+.-. . -++.|+..-.+++.+-.+.|.++ . |-+....+.+.+++++...+
T Consensus 28 ~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vv-a---D~pfgsy~~s~~~a~~na~r 103 (275)
T 1o66_A 28 SFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIV-S---DLPFGAYQQSKEQAFAAAAE 103 (275)
T ss_dssp HHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEE-E---ECCTTSSSSCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEE-E---ECCCCCccCCHHHHHHHHHH
Confidence 456777889999998742 1 12888888888888755555444 2 22222234577877764333
Q ss_pred hCCCCceEEEECCCCCccchHHHHHHHhhCCCCeEE----EeeCCCCCcccccccc--cCC-cCHHHHHHHHHHHHHcCC
Q psy15811 479 ANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTI----VYPNKGGVWDSVHMKW--LDT-EDEYSILHYVPQWLEEGV 551 (581)
Q Consensus 479 ~~~~~~~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~----~ypNag~~~~~~~~~~--~~~-~~~~~~~~~~~~w~~~G~ 551 (581)
....++. |||.=+-..+...++.+... .+|++ +-|-+=. ...+| ..+ ...++..+.++.+.++|+
T Consensus 104 l~kaGa~--aVklEdg~e~~~~I~al~~a--gIpV~gHiGLtPQs~~----~~ggf~v~grt~~a~~~i~rA~a~~eAGA 175 (275)
T 1o66_A 104 LMAAGAH--MVKLEGGVWMAETTEFLQMR--GIPVCAHIGLTPQSVF----AFGGYKVQGRGGKAQALLNDAKAHDDAGA 175 (275)
T ss_dssp HHHTTCS--EEEEECSGGGHHHHHHHHHT--TCCEEEEEESCGGGTT----C-----------CHHHHHHHHHHHHHTTC
T ss_pred HHHcCCc--EEEECCcHHHHHHHHHHHHc--CCCeEeeeccCceeec----ccCCeEEEeChHHHHHHHHHHHHHHHcCC
Confidence 2335666 66763334577888888775 47865 3332210 00112 111 124577788888999998
Q ss_pred cEEeecCCCchHHHHHHHHHHh
Q psy15811 552 NIIGGCCEVTSYEIQQMRIMID 573 (581)
Q Consensus 552 ~iiGGCCGt~P~hI~al~~~l~ 573 (581)
-.|===| +..+.+++|.+.++
T Consensus 176 ~~ivlE~-vp~~~a~~it~~l~ 196 (275)
T 1o66_A 176 AVVLMEC-VLAELAKKVTETVS 196 (275)
T ss_dssp SEEEEES-CCHHHHHHHHHHCS
T ss_pred cEEEEec-CCHHHHHHHHHhCC
Confidence 6553333 45677888877764
No 224
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=58.35 E-value=49 Score=33.92 Aligned_cols=115 Identities=21% Similarity=0.201 Sum_probs=66.4
Q ss_pred CCCHHHH---HHHHHHHHHHHHhCCCCEEEecc----------cCC------------HH---HHHHHHHHHHhcCCC-e
Q psy15811 400 SMTEADL---IAWHRPNVEALVRAGVDYLALET----------IPA------------EK---EALALVKLLREFPGQ-K 450 (581)
Q Consensus 400 ~~~~~~~---~~~~~~~~~~l~~~gvD~i~~ET----------~p~------------~~---Ea~a~~~~~~~~~~~-p 450 (581)
.++.+|+ .+.|.+.++.+.++|.|.|=+=- .|. .. -+..+++++++..+. |
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~p 229 (365)
T 2gou_A 150 AMTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAER 229 (365)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGG
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCc
Confidence 4666554 56777777778889999985521 011 11 234456666643222 8
Q ss_pred EEEEEEEcCC-CcCCCCCcHHHHHHHHHhhCCCCceEEEECCC----CCccchHHHHHHHhhCCCCeEEE
Q psy15811 451 AWLSFSCKDD-THTSHGELISSAVTSCLLANPDQIQAIGVNCV----RPSHVSTLVRCIKQSHPTVQTIV 515 (581)
Q Consensus 451 v~iSft~~~~-~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~----~p~~~~~~l~~l~~~~~~~pl~~ 515 (581)
|.+-++..+. ....+|.++++++..+..+...+++.|-+-.. .|..-...++.+++.. ++|+++
T Consensus 230 v~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~-~iPvi~ 298 (365)
T 2gou_A 230 VGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAY-QGVLIY 298 (365)
T ss_dssp EEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHC-CSEEEE
T ss_pred EEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHC-CCcEEE
Confidence 8887765321 12345677777655544444567787776652 1222235677787776 588764
No 225
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=58.32 E-value=2.2e+02 Score=31.38 Aligned_cols=92 Identities=14% Similarity=0.061 Sum_probs=57.4
Q ss_pred CCCCCHHH---HHHHHHHHHHHHHHCCCcEEEEE---cc-------------------CCHH----HHHHHHHHHHhc--
Q psy15811 142 VDSMTEAD---LIAWHRPNVEALVRAGVDYLALE---TI-------------------PAEK----EALALVKLLREF-- 190 (581)
Q Consensus 142 ~~~~~~~~---~~~~~~~q~~~l~~~gvD~l~~E---T~-------------------~~~~----E~~aa~~a~~~~-- 190 (581)
.+++|.+| +.+.|.+-++...++|.|.|=+= -. .+++ =+..+++++++.
T Consensus 143 p~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g 222 (690)
T 3k30_A 143 ARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECA 222 (690)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHT
T ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhC
Confidence 35677665 55677777787888999988541 01 1222 244556666643
Q ss_pred CCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC
Q psy15811 191 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 236 (581)
Q Consensus 191 ~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~ 236 (581)
++.||.+-++..+ ....|-++++++..+..+.. +++++.|...
T Consensus 223 ~~~~v~~r~s~~~--~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~ 265 (690)
T 3k30_A 223 GRAAVACRITVEE--EIDGGITREDIEGVLRELGE-LPDLWDFAMG 265 (690)
T ss_dssp TSSEEEEEEECCC--CSTTSCCHHHHHHHHHHHTT-SSSEEEEECS
T ss_pred CCceEEEEECccc--cCCCCCCHHHHHHHHHHHHh-hcCEEEEecc
Confidence 2578888777653 33567778877655443334 6888888774
No 226
>3ubm_A COAT2, formyl-COA:oxalate COA-transferase; HET: COA; 1.99A {Acetobacter aceti}
Probab=57.82 E-value=14 Score=39.38 Aligned_cols=75 Identities=11% Similarity=0.143 Sum_probs=50.3
Q ss_pred cccCCChHHHHHHHHHHHHhccccccccccccccccHhhcCCCHHHHHHHHHHHHHHHHHHhhhhcCCCccccccccccc
Q psy15811 35 VYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLL 114 (581)
Q Consensus 35 ~~~l~~Pe~v~~iH~~yl~AGAdiI~TnTf~a~~~~l~~~g~~~~~~~~i~~~av~lA~~a~~~~~~~~~~~~~~~~~~~ 114 (581)
.++|.+|+-.+.+++ |-+.|||+.+| |+ +..+.++|++.+.+++ . .
T Consensus 97 ~LDLk~~eGr~~l~~--Li~~ADVvven-fR--PG~~erlGL~ye~L~~--------------~------------N--- 142 (456)
T 3ubm_A 97 ELNTKTPEGKAVFEK--CIKWADILLEN-FR--PGAMERMGFTWEYLQQ--------------L------------N--- 142 (456)
T ss_dssp ECCTTSHHHHHHHHH--HHHHCSEEEEC-CS--TTHHHHTTCCHHHHHH--------------H------------C---
T ss_pred EeeCCCHHHHHHHHH--HHHhCCEEEEC-CC--ccHHHHhCCCHHHHHH--------------h------------C---
Confidence 467888986554443 23459999999 76 6668899998665432 1 1
Q ss_pred CCCeEEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHH
Q psy15811 115 TGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAW 153 (581)
Q Consensus 115 ~~~~~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~ 153 (581)
+.+|..||-.||. +|+|.+-..+|.+.+.
T Consensus 143 --P~LIy~sisGfG~--------~GP~a~rpg~D~~~qA 171 (456)
T 3ubm_A 143 --PRLIYGTVKGFGE--------NSPWAGVSAYENVAQC 171 (456)
T ss_dssp --TTCEEEEEESSCT--------TCTTTTSCCCHHHHHH
T ss_pred --CCcEEEEEEecCC--------CCCCCCCCCcHHHHHH
Confidence 6688999989886 3455555556665543
No 227
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=57.48 E-value=47 Score=32.27 Aligned_cols=91 Identities=14% Similarity=0.082 Sum_probs=57.4
Q ss_pred HHHHHHHHHHCCCcEEEEEccCC----------------------HHHHHHHHHHHHhcC-CCcEEEEEEEcCCCcCCCC
Q psy15811 154 HRPNVEALVRAGVDYLALETIPA----------------------EKEALALVKLLREFP-GQKAWLSFSCKDDTHTSHG 210 (581)
Q Consensus 154 ~~~q~~~l~~~gvD~l~~ET~~~----------------------~~E~~aa~~a~~~~~-~~pv~isft~~~~g~l~~G 210 (581)
..+.++.|.++|||.|-+-+-.+ ++.....++.+|+.. ++|+++ |+.-+ .-. -
T Consensus 33 ~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~-m~y~n-~v~--~ 108 (262)
T 2ekc_A 33 SLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLL-MTYYN-PIF--R 108 (262)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEE-ECCHH-HHH--H
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEE-EecCc-HHH--H
Confidence 36678889999999998876322 122334466666544 899887 32211 000 0
Q ss_pred CCHHHHHHHHHhhCCCCceEEEeCCCChhhHHHHHHHHHhh
Q psy15811 211 ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQS 251 (581)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~vGvNC~~p~~~~~~l~~l~~~ 251 (581)
..++..++.+.+ .|++++-+.+..+++...+++.++++
T Consensus 109 ~g~~~f~~~~~~---aG~dgvii~dl~~ee~~~~~~~~~~~ 146 (262)
T 2ekc_A 109 IGLEKFCRLSRE---KGIDGFIVPDLPPEEAEELKAVMKKY 146 (262)
T ss_dssp HCHHHHHHHHHH---TTCCEEECTTCCHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHH---cCCCEEEECCCCHHHHHHHHHHHHHc
Confidence 112455555553 78899888887788887888777764
No 228
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=57.42 E-value=62 Score=34.16 Aligned_cols=166 Identities=16% Similarity=0.214 Sum_probs=81.1
Q ss_pred CCceEEeccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec---ccCC------HHHHHHH---
Q psy15811 372 ISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE---TIPA------EKEALAL--- 439 (581)
Q Consensus 372 ~~v~VagsiGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l~~~gvD~i~~E---T~p~------~~Ea~a~--- 439 (581)
.+.+|.|=+-=+++++.||. ++ .++ -.++++.+.+.|+|+|=+- |-|. -+|.+-+
T Consensus 189 ~~~~vMGIlNvTPDSFsDgg-~~--------~~~----al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pv 255 (442)
T 3mcm_A 189 ANTIRMGIVNLSNQSFSDGN-FD--------DNQ----RKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEF 255 (442)
T ss_dssp CSSEEEEEEECSSCC-CCCS-SC--------CCH----HHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHH
T ss_pred CCceEEEEEeCCCCCCCCCC-CC--------HHH----HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH
Confidence 45789998888888888875 21 122 2467777888899998554 3332 3455544
Q ss_pred HHHHHh-cCC--CeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECCCCCccchHHHHHHHhhCCCCeEEEe
Q psy15811 440 VKLLRE-FPG--QKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVY 516 (581)
Q Consensus 440 ~~~~~~-~~~--~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~y 516 (581)
++++++ .+. ..+.+|+-- ..-+-++++++.. . ++. |.||-++-.....+++.++.. +.|+++.
T Consensus 256 I~~l~~~~~~~~~~vpISIDT------~~~~VaeaAL~~~---a--Ga~-i~INDVsg~~d~~m~~v~a~~--g~~vVlM 321 (442)
T 3mcm_A 256 LEYFKSQLANLIYKPLVSIDT------RKLEVMQKILAKH---H--DII-WMINDVECNNIEQKAQLIAKY--NKKYVII 321 (442)
T ss_dssp HHHHHHHTTTCSSCCEEEEEC------CCHHHHHHHHHHH---G--GGC-CEEEECCCTTHHHHHHHHHHH--TCEEEEE
T ss_pred HHHHHhhccccCCCCeEEEeC------CCHHHHHHHHhhC---C--CCC-EEEEcCCCCCChHHHHHHHHh--CCeEEEE
Confidence 555654 112 135566621 1212233333322 2 323 226664334455666666666 4899999
Q ss_pred eCCCCCcccccccccCC-cC-HHHHHHHHHHHHHcCC---cEE---eecCCCchHH
Q psy15811 517 PNKGGVWDSVHMKWLDT-ED-EYSILHYVPQWLEEGV---NII---GGCCEVTSYE 564 (581)
Q Consensus 517 pNag~~~~~~~~~~~~~-~~-~~~~~~~~~~w~~~G~---~ii---GGCCGt~P~h 564 (581)
.+.|.+.+.....+.+- .+ ...+.+.+....++|+ +|| |=--|.+.+|
T Consensus 322 h~~G~P~tmq~~~y~dvv~ev~~~l~~~i~~a~~aGI~~~~IilDPGiGF~Kt~~~ 377 (442)
T 3mcm_A 322 HNLGITDRNQYLDKENAIDNVCDYIEQKKQILLKHGIAQQNIYFDIGFGFGKKSDT 377 (442)
T ss_dssp CC----------------CTHHHHHHHHHHHHHHHTCCGGGEEEECCCC-------
T ss_pred CCCCCCccccccCcccHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCCCCCCCCHHH
Confidence 99886533221111111 11 2355667777888898 465 3223555543
No 229
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=57.39 E-value=79 Score=30.63 Aligned_cols=151 Identities=9% Similarity=0.038 Sum_probs=79.7
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhC
Q psy15811 401 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN 480 (581)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~ 480 (581)
.+.+++.+...+.++.|.+.|+|+|++-....- ..+++.+++..++||+ ++ ++.+++.+....
T Consensus 45 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTas---~~~l~~lr~~~~iPvi-gi-------------~ep~~~~A~~~~ 107 (267)
T 2gzm_A 45 RSREEVRQFTWEMTEHLLDLNIKMLVIACNTAT---AVVLEEMQKQLPIPVV-GV-------------IHPGSRTALKVT 107 (267)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHH---HHHHHHHHHHCSSCEE-ES-------------HHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhh---HHHHHHHHHhCCCCEE-ee-------------cHHHHHHHHHcc
Confidence 578999999999999999999999998754421 2357778866789976 22 233344332122
Q ss_pred CCCceEEEECCCCCccchHHH-HHHHhhCCCCeEEEeeCCCCCcccccccccC-CcCHHHHHHHHHHHHHcCCc-EEeec
Q psy15811 481 PDQIQAIGVNCVRPSHVSTLV-RCIKQSHPTVQTIVYPNKGGVWDSVHMKWLD-TEDEYSILHYVPQWLEEGVN-IIGGC 557 (581)
Q Consensus 481 ~~~~~~iGiNC~~p~~~~~~l-~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~-~~~~~~~~~~~~~w~~~G~~-iiGGC 557 (581)
.. .-|||=.+....-.... +.++..+.+..+...|..+.+.... .++.. ......+.++++.+.+.|+. ||=||
T Consensus 108 ~~--~rIgVlaT~~T~~~~~y~~~l~~~~~g~~v~~~~~~~~v~~ie-~g~~~~~~~~~~l~~~~~~l~~~~~d~iVLGC 184 (267)
T 2gzm_A 108 NT--YHVGIIGTIGTVKSGAYEEALKSINNRVMVESLACPPFVELVE-SGNFESEMAYEVVRETLQPLKNTDIDTLILGC 184 (267)
T ss_dssp SS--CEEEEEECHHHHHHTHHHHHHHHHCTTCEEEEEECTTHHHHHH-TTCSSSHHHHHHHHHHHHHHHHSCCSEEEECS
T ss_pred CC--CEEEEEEChHHhccHHHHHHHHHhCCCCEEeccCCHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHhcCCCEEEEcc
Confidence 22 24555443222111122 2233332234555455443222222 22221 11234566777788777753 45567
Q ss_pred CCCchHHHHHHHHHH
Q psy15811 558 CEVTSYEIQQMRIMI 572 (581)
Q Consensus 558 CGt~P~hI~al~~~l 572 (581)
-.-.. -...+.+.+
T Consensus 185 Th~p~-l~~~i~~~~ 198 (267)
T 2gzm_A 185 THYPI-LGPVIKQVM 198 (267)
T ss_dssp TTGGG-GHHHHHHHH
T ss_pred cChHH-HHHHHHHHc
Confidence 54433 334444333
No 230
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=57.36 E-value=6.6 Score=39.19 Aligned_cols=39 Identities=18% Similarity=0.043 Sum_probs=32.6
Q ss_pred HHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEE
Q psy15811 410 HRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAW 452 (581)
Q Consensus 410 ~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~ 452 (581)
-.++++++.++|+|.|++|.+|+..+++.+.+.+ ++|++
T Consensus 170 ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~----~~P~i 208 (287)
T 3b8i_A 170 VIQRTLAYQEAGADGICLVGVRDFAHLEAIAEHL----HIPLM 208 (287)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSHHHHHHHHTTC----CSCEE
T ss_pred HHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHhC----CCCEE
Confidence 4478899999999999999999998888776654 58877
No 231
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=57.23 E-value=21 Score=35.23 Aligned_cols=50 Identities=12% Similarity=0.132 Sum_probs=35.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEE
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAW 452 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~ 452 (581)
.-+.+++.++-.+.++.|.+.|+|+|++-+...- ..+++.+|+..++|++
T Consensus 65 ~ks~e~i~~~~~~~~~~L~~~g~d~IVIACNTa~---~~al~~lr~~~~iPvi 114 (274)
T 3uhf_A 65 VKDKDTIIKFCLEALDFFEQFQIDMLIIACNTAS---AYALDALRAKAHFPVY 114 (274)
T ss_dssp TSCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHH---HHSHHHHHHHCSSCEE
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCChh---HHHHHHHHHhcCCCEE
Confidence 3689999999999999999999999998754421 1224555544456644
No 232
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=57.22 E-value=1.1e+02 Score=31.07 Aligned_cols=113 Identities=15% Similarity=0.198 Sum_probs=70.5
Q ss_pred CCCH---HHHHHHHHHHHHHHHhCCCCEEEecc----------cCC------------HHHH---HHHHHHHHhcC--CC
Q psy15811 400 SMTE---ADLIAWHRPNVEALVRAGVDYLALET----------IPA------------EKEA---LALVKLLREFP--GQ 449 (581)
Q Consensus 400 ~~~~---~~~~~~~~~~~~~l~~~gvD~i~~ET----------~p~------------~~Ea---~a~~~~~~~~~--~~ 449 (581)
.++. +++.+.|.+.++...++|.|.|=+=- .|. ...+ ..+++++++.. +.
T Consensus 132 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~ 211 (343)
T 3kru_A 132 ELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENK 211 (343)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTS
T ss_pred hcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccC
Confidence 4554 55677888888888899999985541 121 1223 45666666543 57
Q ss_pred eEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECC--C-------CCccchHHHHHHHhhCCCCeEEEe
Q psy15811 450 KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC--V-------RPSHVSTLVRCIKQSHPTVQTIVY 516 (581)
Q Consensus 450 pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC--~-------~p~~~~~~l~~l~~~~~~~pl~~y 516 (581)
|+.+-++.. .....|.++++++..+..+... ++.|-+.. . .|..-...++.+++.. ++|+++-
T Consensus 212 pv~vRls~~--~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~~ 283 (343)
T 3kru_A 212 PIFVRVSAD--DYMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRC-NIKTSAV 283 (343)
T ss_dssp CEEEEEECC--CSSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-TCEEEEE
T ss_pred CeEEEeech--hhhccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhc-Cccccee
Confidence 888888753 2334577888877766555666 88776632 1 1223345667777665 5787653
No 233
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=56.98 E-value=39 Score=32.48 Aligned_cols=101 Identities=17% Similarity=0.185 Sum_probs=53.6
Q ss_pred HHHHHHHhCCCCEEEecccCCHH--HHHHHHHHHHhcC--CCeEEEEEEEc--CC---CcCCCC-----CcHHHHHHHHH
Q psy15811 412 PNVEALVRAGVDYLALETIPAEK--EALALVKLLREFP--GQKAWLSFSCK--DD---THTSHG-----ELISSAVTSCL 477 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~p~~~--Ea~a~~~~~~~~~--~~pv~iSft~~--~~---~~l~~G-----~~~~~~~~~l~ 477 (581)
++++.+.+.|+|.+++-+...-. +...+.+.++.+. .-.+++++.++ ++ -.+..+ .+..+.++.+.
T Consensus 87 ~~i~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~ 166 (266)
T 2w6r_A 87 EHFLEAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVE 166 (266)
T ss_dssp HHHHHHHHHTCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHH
Confidence 45666667899999988765412 3333444444322 13566777764 21 112111 35666666653
Q ss_pred hhCCCCceEEEECCCCCcc-----chHHHHHHHhhCCCCeEEEe
Q psy15811 478 LANPDQIQAIGVNCVRPSH-----VSTLVRCIKQSHPTVQTIVY 516 (581)
Q Consensus 478 ~~~~~~~~~iGiNC~~p~~-----~~~~l~~l~~~~~~~pl~~y 516 (581)
+ .++..|.++...... -...+++++... ++|+++-
T Consensus 167 ~---~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~-~ipvia~ 206 (266)
T 2w6r_A 167 K---RGAGEILLTSIDRDGTKSGYDTEMIRFVRPLT-TLPIIAS 206 (266)
T ss_dssp H---TTCSEEEEEETTTTTTCSCCCHHHHHHHGGGC-CSCEEEE
T ss_pred H---cCCCEEEEEeecCCCCcCCCCHHHHHHHHHHc-CCCEEEe
Confidence 2 355666765432111 246778887765 6887664
No 234
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=56.77 E-value=45 Score=35.88 Aligned_cols=65 Identities=20% Similarity=0.290 Sum_probs=42.8
Q ss_pred HHHHHHHHHCCCcEEEEEcc-CCHHHHHHHHHHHHh-cCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEE
Q psy15811 155 RPNVEALVRAGVDYLALETI-PAEKEALALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIG 232 (581)
Q Consensus 155 ~~q~~~l~~~gvD~l~~ET~-~~~~E~~aa~~a~~~-~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vG 232 (581)
.++++.|+++|+|++.+-+- ++...+...++.+++ .+++|+++.- + .+.+.+. .+. ..|+++|-
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~-v---------~t~e~a~-~~~---~aGad~i~ 323 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGN-V---------ATAEATK-ALI---EAGANVVK 323 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEE-E---------CSHHHHH-HHH---HHTCSEEE
T ss_pred HHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeee-e---------ccHHHHH-HHH---HhCCCEEE
Confidence 56788999999999998654 355566667777774 4578888521 1 2454443 333 35788776
Q ss_pred e
Q psy15811 233 V 233 (581)
Q Consensus 233 v 233 (581)
+
T Consensus 324 v 324 (511)
T 3usb_A 324 V 324 (511)
T ss_dssp E
T ss_pred E
Confidence 6
No 235
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=56.18 E-value=6.9 Score=38.38 Aligned_cols=42 Identities=10% Similarity=0.070 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEE
Q psy15811 152 AWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWL 197 (581)
Q Consensus 152 ~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~i 197 (581)
+.-.++++++.++|+|.|++|-+++.++++.+.+.+ +.|+.+
T Consensus 168 ~~ai~ra~a~~eAGAd~i~~e~~~~~~~~~~i~~~~----~~P~n~ 209 (255)
T 2qiw_A 168 VEAIKRIKLMEQAGARSVYPVGLSTAEQVERLVDAV----SVPVNI 209 (255)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCCSHHHHHHHHTTC----SSCBEE
T ss_pred HHHHHHHHHHHHcCCcEEEEcCCCCHHHHHHHHHhC----CCCEEE
Confidence 344568899999999999999999998888766554 467643
No 236
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=55.94 E-value=77 Score=32.37 Aligned_cols=140 Identities=11% Similarity=0.050 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHhCCCCEEE-ecccCC-----------HHHHHHHHHHHHhc-C--CCeEEEEEEEcCCCcCCCCCcHH
Q psy15811 406 LIAWHRPNVEALVRAGVDYLA-LETIPA-----------EKEALALVKLLREF-P--GQKAWLSFSCKDDTHTSHGELIS 470 (581)
Q Consensus 406 ~~~~~~~~~~~l~~~gvD~i~-~ET~p~-----------~~Ea~a~~~~~~~~-~--~~pv~iSft~~~~~~l~~G~~~~ 470 (581)
+.+...+-++...++|+|.|. +++... ..=.+-+++.+++. + ++|+ ++|++.. + .
T Consensus 195 i~~~~~~y~~~qi~aGad~i~ifDs~~~~Lsp~~f~ef~~Py~k~i~~~l~~~~~g~~~pv-i~f~~g~-~-----~--- 264 (368)
T 4exq_A 195 NAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKREHDGARVPA-IAFTKGG-G-----L--- 264 (368)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEEETTGGGSCTTHHHHHTHHHHHHHHHTSCCEETTEECCE-EEEETTC-G-----G---
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCcE-EEEcCCc-H-----H---
Confidence 333444445555678999984 565543 22233444444431 2 3676 4676521 1 1
Q ss_pred HHHHHHHhhCCCCceEEEECC-CCCccchHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHHHc
Q psy15811 471 SAVTSCLLANPDQIQAIGVNC-VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEE 549 (581)
Q Consensus 471 ~~~~~l~~~~~~~~~~iGiNC-~~p~~~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 549 (581)
.+..+ ...++++|++.- ++ +..+-+.+ +.+ +.++-|--+. .. ..+++.+.+.+++.++.
T Consensus 265 -~l~~l---~~~g~d~i~~d~~~d---l~~ak~~~---g~~--~~l~Gnldp~-------~L-~gt~e~I~~~v~~~l~~ 324 (368)
T 4exq_A 265 -WLEDL---AATGVDAVGLDWTVN---LGRARERV---AGR--VALQGNLDPT-------IL-FAPPEAIRAEARAVLDS 324 (368)
T ss_dssp -GHHHH---HTSSCSEEECCTTSC---HHHHHHHH---TTS--SEEEEEECGG-------GG-GSCHHHHHHHHHHHHHH
T ss_pred -HHHHH---HHhCCCEEeeCCCCC---HHHHHHHh---CCC--EEEEECCCHH-------Hh-CCCHHHHHHHHHHHHHH
Confidence 12334 234678888764 32 22222222 222 3344444211 11 23577888888888753
Q ss_pred ----CCcEEeecCCC----chHHHHHHHHHHhcc
Q psy15811 550 ----GVNIIGGCCEV----TSYEIQQMRIMIDEF 575 (581)
Q Consensus 550 ----G~~iiGGCCGt----~P~hI~al~~~l~~~ 575 (581)
|--|++--||. .|++|+++.+.++++
T Consensus 325 ~g~~~g~I~n~Ghgi~p~tp~Env~a~veav~~~ 358 (368)
T 4exq_A 325 YGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRH 358 (368)
T ss_dssp HCSCSCEEEEESSCCCTTCCHHHHHHHHHHHHHH
T ss_pred hCCCCCEEEeCCCCCCCCcCHHHHHHHHHHHHHh
Confidence 34677766775 589999999888764
No 237
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=55.76 E-value=1.8e+02 Score=29.48 Aligned_cols=230 Identities=15% Similarity=0.187 Sum_probs=139.1
Q ss_pred HHHHHHHHHHHHhccccccccccccccccHhh-cCCCHHHHHHHHHHHHHHHHHHhhhhcCCCcccccccccccCCCeEE
Q psy15811 42 EACVETHRDFIRAGADIIQSSCYQANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIET 120 (581)
Q Consensus 42 e~v~~iH~~yl~AGAdiI~TnTf~a~~~~l~~-~g~~~~~~~~i~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~~~~~V 120 (581)
+.+.+.-++-++.|-.-|.- |+......+. .|-....-.-+..+|++..|+... +.+|
T Consensus 73 d~l~~~~~~~~~lGi~av~L--Fgv~~p~~KD~~gs~A~~~~g~v~rAir~iK~~~P-------------------~l~V 131 (356)
T 3obk_A 73 EDLLKEVGEARSYGIKAFML--FPKVDDELKSVMAEESYNPDGLLPRAIMALKEAFP-------------------DVLL 131 (356)
T ss_dssp HHHHHHHHHHHHTTCCEEEE--EEECCGGGCBSSCGGGGCTTSHHHHHHHHHHHHST-------------------TCEE
T ss_pred HHHHHHHHHHHHCCCCEEEE--ecCCCcccCCcccccccCCCChHHHHHHHHHHHCC-------------------CCEE
Confidence 55666667788899865433 4543222222 222111112367888887776642 4455
Q ss_pred Eee--cCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhc--CCCcEE
Q psy15811 121 AAS--IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF--PGQKAW 196 (581)
Q Consensus 121 ags--iGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~--~~~pv~ 196 (581)
..+ +-||...=+.|---. -.+.+..|+-.+.+.+|+-..+++|+|++.==-|-|- .+.++.+++.+. .+.|++
T Consensus 132 itDVcLc~YT~HGHcGil~~--~~g~V~ND~Tl~~Lak~Als~A~AGADiVAPSdMMDG-rV~aIR~aLd~~G~~~v~IM 208 (356)
T 3obk_A 132 LADVALDPYSSMGHDGVVDE--QSGKIVNDLTVHQLCKQAITLARAGADMVCPSDMMDG-RVSAIRESLDMEGCTDTSIL 208 (356)
T ss_dssp EEEECSGGGBTTCCSSCBCT--TTCCBCHHHHHHHHHHHHHHHHHHTCSEEEECSCCTT-HHHHHHHHHHHTTCTTSEEE
T ss_pred EEeeccccccCCCcceeeeC--CCCCCCCHHHHHHHHHHHHHHHHcCCCeEeccccccC-HHHHHHHHHHHCCCCCccee
Confidence 555 557666544331100 0135789999999999999999999999987777776 567777777753 356544
Q ss_pred EEEEEc--C------------C----C----cCCCCCCHHHHHHHHHhhCCCCceEEEeCCCChhhHHHHHHHHHhhCCC
Q psy15811 197 LSFSCK--D------------D----T----HTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPT 254 (581)
Q Consensus 197 isft~~--~------------~----g----~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~~p~~~~~~l~~l~~~~~~ 254 (581)
|.+.+ + . | +-++-..-.+|+..+......|+|.|.|-=+.| -+.+++.++.. .+
T Consensus 209 -sYsaKyASafYGPFRdAa~Sa~p~~GDRktYQmdpaN~~EAlrE~~lDi~EGAD~vMVKPal~--YLDIi~~vk~~-~~ 284 (356)
T 3obk_A 209 -AYSCKYASSFYGPFRDALDSHMVGGTDKKTYQMDPSNSREAEREAEADASEGADMLMVKPGLP--YLDVLAKIREK-SK 284 (356)
T ss_dssp -EEEEEBCCSTTHHHHHHHTCCCSTTCCSTTTSBCTTCSHHHHHHHHHHHHTTCSEEEEESSGG--GHHHHHHHHHH-CS
T ss_pred -hhHHHHhhhccchhhHHhcCCCCCCCCccccCCCCCCHHHHHHHHHhhHhcCCCEEEecCCCc--HHHHHHHHHhc-CC
Confidence 55533 1 1 1 112323345566554433457899999987755 35778888876 78
Q ss_pred CceEEecCCCccccCCCchhhhccccCcccCCCCcccccccCCChHHHHHHHHHHHHH---HHhhc
Q psy15811 255 VQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRG---HIETA 317 (581)
Q Consensus 255 ~p~~~~pnag~~~~dG~~gt~L~~~~g~~~~g~~lws~~~~~~~Pe~v~~vh~~yl~a---iI~Tn 317 (581)
+|+.+|--+| .++ .++.. .. .+ | ++....+.+.+..|.+| +|.|.
T Consensus 285 ~PvaaYqVSG------EYA-MikAA--a~--~G--w-----iD~~~~v~Esl~~~kRAGAd~IiTY 332 (356)
T 3obk_A 285 LPMVAYHVSG------EYA-MLKAA--AE--KG--Y-----ISEKDTVLEVLKSFRRAGADAVATY 332 (356)
T ss_dssp SCEEEEECHH------HHH-HHHHH--HH--HT--S-----SCHHHHHHHHHHHHHHHTCSEEEET
T ss_pred CCEEEEEccH------HHH-HHHHH--HH--cC--C-----ccHHHHHHHHHHHHHHcCCCEEehh
Confidence 9999995555 110 01110 00 01 3 45667788888999999 67774
No 238
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=55.75 E-value=91 Score=29.90 Aligned_cols=46 Identities=15% Similarity=0.107 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhCCCCEEEeccc-C---------------------CHHHHHHHHHHHHhcCCCeEEE
Q psy15811 408 AWHRPNVEALVRAGVDYLALETI-P---------------------AEKEALALVKLLREFPGQKAWL 453 (581)
Q Consensus 408 ~~~~~~~~~l~~~gvD~i~~ET~-p---------------------~~~Ea~a~~~~~~~~~~~pv~i 453 (581)
+...+.++.+.++|+|.|-+-+- + +..+....++.+++..++|+++
T Consensus 32 ~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~Pv~~ 99 (262)
T 1rd5_A 32 ATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVL 99 (262)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSCEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEE
Confidence 34556788889999999977531 1 3455667778888767899765
No 239
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=55.57 E-value=1.4e+02 Score=28.21 Aligned_cols=110 Identities=14% Similarity=0.118 Sum_probs=65.7
Q ss_pred HHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECC
Q psy15811 412 PNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 491 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC 491 (581)
++++...++|+|++..-. .+ ..+++..++ .+.|+++. | .+++++.++. ..+++.|++
T Consensus 80 d~~~~A~~aGAd~v~~p~-~d----~~v~~~ar~-~g~~~i~G--v---------~t~~e~~~A~----~~Gad~vk~-- 136 (224)
T 1vhc_A 80 EQVVLAKSSGADFVVTPG-LN----PKIVKLCQD-LNFPITPG--V---------NNPMAIEIAL----EMGISAVKF-- 136 (224)
T ss_dssp HHHHHHHHHTCSEEECSS-CC----HHHHHHHHH-TTCCEECE--E---------CSHHHHHHHH----HTTCCEEEE--
T ss_pred HHHHHHHHCCCCEEEECC-CC----HHHHHHHHH-hCCCEEec--c---------CCHHHHHHHH----HCCCCEEEE--
Confidence 788888889999997542 11 334556666 58888875 2 1366666654 246788888
Q ss_pred CCCccc--hHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHHHc-CCcEEeecCCCchH
Q psy15811 492 VRPSHV--STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEE-GVNIIGGCCEVTSY 563 (581)
Q Consensus 492 ~~p~~~--~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~~-G~~iiGGCCGt~P~ 563 (581)
.....+ ...|+.++...+++|+ .|-.|-.. . .+.+|++. |+..+||--=+..+
T Consensus 137 Fpa~~~gG~~~lk~l~~~~~~ipv--vaiGGI~~-~----------------N~~~~l~agga~~v~gS~i~~~~ 192 (224)
T 1vhc_A 137 FPAEASGGVKMIKALLGPYAQLQI--MPTGGIGL-H----------------NIRDYLAIPNIVACGGSWFVEKK 192 (224)
T ss_dssp TTTTTTTHHHHHHHHHTTTTTCEE--EEBSSCCT-T----------------THHHHHTSTTBCCEEECGGGCHH
T ss_pred eeCccccCHHHHHHHHhhCCCCeE--EEECCcCH-H----------------HHHHHHhcCCCEEEEEchhcCcc
Confidence 221222 5678888775435675 44444211 1 13668887 77767654433333
No 240
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=55.52 E-value=1.1e+02 Score=30.83 Aligned_cols=229 Identities=16% Similarity=0.130 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHhccccccccccccccccH-hh-cCCCHHHHHHHHHHHHHHHHHHhhhhcCCCcccccccccccCCCeE
Q psy15811 42 EACVETHRDFIRAGADIIQSSCYQANVDNL-TK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIE 119 (581)
Q Consensus 42 e~v~~iH~~yl~AGAdiI~TnTf~a~~~~l-~~-~g~~~~~~~~i~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~~~~~ 119 (581)
+.+.+.-++-++.|-.-|.- |+. +..+ +. .|-....-.-+..+|++..|+..- +.+
T Consensus 59 d~l~~~~~~~~~~Gi~~v~L--Fgv-p~~~~Kd~~gs~A~~~~g~v~~air~iK~~~p-------------------dl~ 116 (330)
T 1pv8_A 59 KRLEEMLRPLVEEGLRCVLI--FGV-PSRVPKDERGSAADSEESPAIEAIHLLRKTFP-------------------NLL 116 (330)
T ss_dssp HHHHHHHHHHHHHTCCEEEE--EEC-C--------------CCSHHHHHHHHHHHHST-------------------TSE
T ss_pred HHHHHHHHHHHHCCCCEEEE--ecC-CcccCCCccccccCCCCChHHHHHHHHHHHCC-------------------CeE
Confidence 56667778888999875443 554 3222 21 222111112378888888877653 344
Q ss_pred EEe--ecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhc--CC-Cc
Q psy15811 120 TAA--SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF--PG-QK 194 (581)
Q Consensus 120 Vag--siGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~--~~-~p 194 (581)
|.. ++-||...-+.|---. .+.+..++-.+.+.+|+-..+++|+|+|.==-|-|- .+.++.+++.+. .+ .|
T Consensus 117 vitDvcLc~YT~HGHcGil~~---~g~v~ND~Tl~~La~~Als~A~AGAdiVAPSdMMDG-rV~aIR~aLd~~G~~~~v~ 192 (330)
T 1pv8_A 117 VACDVCLCPYTSHGHCGLLSE---NGAFRAEESRQRLAEVALAYAKAGCQVVAPSDMMDG-RVEAIKEALMAHGLGNRVS 192 (330)
T ss_dssp EEEEECCC------------------CHHHHHHHHHHHHHHHHHHHHTCSEEEECC--CC-HHHHHHHHHHHTTCTTTCE
T ss_pred EEEeeecccccCCCceeEECC---CCcCccHHHHHHHHHHHHHHHHcCCCeeeccccccc-HHHHHHHHHHhCCCcCCce
Confidence 554 4666665444331100 134678899999999999999999999987666666 567777777653 34 44
Q ss_pred EEEEEEEc---------------------CCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCCChhhHHHHHHHHHhhCC
Q psy15811 195 AWLSFSCK---------------------DDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHP 253 (581)
Q Consensus 195 v~isft~~---------------------~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~~p~~~~~~l~~l~~~~~ 253 (581)
++ |.+.+ ...+-++-..-.+++..+......|+|.|.|-=+.|. +.+++.++...+
T Consensus 193 Im-sYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPal~Y--LDIi~~vk~~~p 269 (330)
T 1pv8_A 193 VM-SYSAKFASCFYGPFRDAAKSSPAFGDRRCYQLPPGARGLALRAVDRDVREGADMLMVKPGMPY--LDIVREVKDKHP 269 (330)
T ss_dssp EB-CCCEECCCGGGHHHHHCC-------------CCTTCHHHHHHHHHHHHHTTCSBEEEESCGGG--HHHHHHHHHHST
T ss_pred Ee-ehhHHHhHhhhhHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCceEEEecCccH--HHHHHHHHHhcC
Confidence 33 43322 1112344455667776654444678999999877653 578888887634
Q ss_pred CCceEEecCCCccccCCCchhhhccccCcccCCCCcccccccCCChHHHHHHHHHHHHH---HHhhc
Q psy15811 254 TVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRG---HIETA 317 (581)
Q Consensus 254 ~~p~~~~pnag~~~~dG~~gt~L~~~~g~~~~g~~lws~~~~~~~Pe~v~~vh~~yl~a---iI~Tn 317 (581)
++|+.+|--+| .++ .++.. .. .+ | ++....+.+.+..|.+| +|.|.
T Consensus 270 ~~P~aaYqVSG------EYA-MikaA--a~--~G--w-----iD~~~~v~Esl~~~kRAGAd~IiTY 318 (330)
T 1pv8_A 270 DLPLAVYHVSG------EFA-MLWHG--AQ--AG--A-----FDLKAAVLEAMTAFRRAGADIIITY 318 (330)
T ss_dssp TSCEEEEECHH------HHH-HHHHH--HH--TT--S-----SCHHHHHHHHHHHHHHHTCSEEEET
T ss_pred CCCeEEEEcCc------HHH-HHHHH--HH--cC--C-----ccHHHHHHHHHHHHHhcCCCEEeee
Confidence 89999995555 110 01110 00 11 3 55667788888999999 77775
No 241
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=55.37 E-value=14 Score=36.42 Aligned_cols=50 Identities=8% Similarity=0.121 Sum_probs=37.5
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcC-CCeEE
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFP-GQKAW 452 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~-~~pv~ 452 (581)
.-+.+++.++-.+.++.|.+.|+|+|++-....- ..+++.+|+.. ++|++
T Consensus 48 ~~~~~~i~~~~~~~~~~L~~~g~~~iVIACNTa~---~~al~~lr~~~~~iPvi 98 (268)
T 3out_A 48 TKSRATIQKFAAQTAKFLIDQEVKAIIIACNTIS---AIAKDIVQEIAKAIPVI 98 (268)
T ss_dssp TSCHHHHHHHHHHHHHHHHHTTCSEEEECCHHHH---HHHHHHHHHHHTTSCEE
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCChH---HHHHHHHHHhcCCCCEE
Confidence 4689999999999999999999999998764421 13445666544 67755
No 242
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=55.15 E-value=14 Score=36.57 Aligned_cols=45 Identities=27% Similarity=0.292 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEE
Q psy15811 146 TEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAW 196 (581)
Q Consensus 146 ~~~~~~~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~ 196 (581)
+.++ .+.-.+++.++.++|+|.|++|-+++. +++.+.+.+ ++|++
T Consensus 168 t~~~-a~~~i~rA~a~~eAGA~~ivlE~vp~~-~a~~It~~l----~iP~i 212 (275)
T 3vav_A 168 TEAG-AAQLLRDARAVEEAGAQLIVLEAVPTL-VAAEVTREL----SIPTI 212 (275)
T ss_dssp SHHH-HHHHHHHHHHHHHHTCSEEEEESCCHH-HHHHHHHHC----SSCEE
T ss_pred CHHH-HHHHHHHHHHHHHcCCCEEEecCCCHH-HHHHHHHhC----CCCEE
Confidence 4333 466778899999999999999999985 666554443 67876
No 243
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=54.80 E-value=1.2e+02 Score=27.74 Aligned_cols=82 Identities=17% Similarity=0.241 Sum_probs=49.0
Q ss_pred HHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECC
Q psy15811 412 PNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 491 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC 491 (581)
++++.+.+.|+|++.+.... ..+++..++ .+.+++++ + .++.++.... ..+++.|+++-
T Consensus 71 ~~i~~a~~~Gad~V~~~~~~-----~~~~~~~~~-~g~~~~~g--~---------~t~~e~~~a~----~~G~d~v~v~~ 129 (212)
T 2v82_A 71 EQVDALARMGCQLIVTPNIH-----SEVIRRAVG-YGMTVCPG--C---------ATATEAFTAL----EAGAQALKIFP 129 (212)
T ss_dssp HHHHHHHHTTCCEEECSSCC-----HHHHHHHHH-TTCEEECE--E---------CSHHHHHHHH----HTTCSEEEETT
T ss_pred HHHHHHHHcCCCEEEeCCCC-----HHHHHHHHH-cCCCEEee--c---------CCHHHHHHHH----HCCCCEEEEec
Confidence 46888889999999866532 223456666 47888766 2 1455655443 24678888854
Q ss_pred CCCccchHHHHHHHhhCC-CCeEEE
Q psy15811 492 VRPSHVSTLVRCIKQSHP-TVQTIV 515 (581)
Q Consensus 492 ~~p~~~~~~l~~l~~~~~-~~pl~~ 515 (581)
+.+. -...+++++...+ ++|+++
T Consensus 130 t~~~-g~~~~~~l~~~~~~~ipvia 153 (212)
T 2v82_A 130 SSAF-GPQYIKALKAVLPSDIAVFA 153 (212)
T ss_dssp HHHH-CHHHHHHHHTTSCTTCEEEE
T ss_pred CCCC-CHHHHHHHHHhccCCCeEEE
Confidence 3222 2356666665432 256443
No 244
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=54.69 E-value=1.4e+02 Score=29.06 Aligned_cols=148 Identities=9% Similarity=0.041 Sum_probs=87.5
Q ss_pred HHHHHHHhCCCCEEEecc--------cC-----CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHh
Q psy15811 412 PNVEALVRAGVDYLALET--------IP-----AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLL 478 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET--------~p-----~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~ 478 (581)
.-++.+.++|+|+|++-. .| ++.|+..-.+.+.+-.+.|.++ . |-+....+ +.+++++...+
T Consensus 28 ~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vv-a---D~pfgsy~-~~~~a~~~a~r 102 (264)
T 1m3u_A 28 SFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLL-A---DLPFMAYA-TPEQAFENAAT 102 (264)
T ss_dssp HHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEE-E---ECCTTSSS-SHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEE-E---ECCCCCcC-CHHHHHHHHHH
Confidence 456677789999999842 11 2688888888888755555544 3 22222233 67777763332
Q ss_pred hCCCCceEEEECCCCCccchHHHHHHHhhCCCCeEE----EeeCCCCCcccccccc--cCCcC--HHHHHHHHHHHHHcC
Q psy15811 479 ANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTI----VYPNKGGVWDSVHMKW--LDTED--EYSILHYVPQWLEEG 550 (581)
Q Consensus 479 ~~~~~~~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~----~ypNag~~~~~~~~~~--~~~~~--~~~~~~~~~~w~~~G 550 (581)
....++. +||+=+-..+...++.+... .+|++ +-|-+= ....+| ..+.+ .++..+.++.+.++|
T Consensus 103 l~kaGa~--aVklEgg~e~~~~I~al~~a--gipV~gHiGLtPq~v----~~~ggf~v~grt~~~a~~~i~rA~a~~eAG 174 (264)
T 1m3u_A 103 VMRAGAN--MVKIEGGEWLVETVQMLTER--AVPVCGHLGLTPQSV----NIFGGYKVQGRGDEAGDQLLSDALALEAAG 174 (264)
T ss_dssp HHHTTCS--EEECCCSGGGHHHHHHHHHT--TCCEEEEEESCGGGH----HHHTSSCCCCCSHHHHHHHHHHHHHHHHHT
T ss_pred HHHcCCC--EEEECCcHHHHHHHHHHHHC--CCCeEeeecCCceee----cccCCeEEEeCCHHHHHHHHHHHHHHHHCC
Confidence 2335666 77774445677888888776 47765 333210 000112 12211 346677788888999
Q ss_pred CcEEeecCCCchHHHHHHHHHHh
Q psy15811 551 VNIIGGCCEVTSYEIQQMRIMID 573 (581)
Q Consensus 551 ~~iiGGCCGt~P~hI~al~~~l~ 573 (581)
+-.|===| +..+.+++|.+.++
T Consensus 175 A~~ivlE~-vp~~~a~~it~~l~ 196 (264)
T 1m3u_A 175 AQLLVLEC-VPVELAKRITEALA 196 (264)
T ss_dssp CCEEEEES-CCHHHHHHHHHHCS
T ss_pred CcEEEEec-CCHHHHHHHHHhCC
Confidence 86543323 45677777877764
No 245
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=54.63 E-value=1.1e+02 Score=31.16 Aligned_cols=76 Identities=13% Similarity=0.129 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEE
Q psy15811 152 AWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 231 (581)
Q Consensus 152 ~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~v 231 (581)
+.+.+.++.|.+.|+|+|-+=.-..-. ..++.+|+.-+.||++. |. .+.+++.+.+. ...+|.|
T Consensus 242 ~~~~~la~~l~~~Gvd~i~v~~~~~~~---~~~~~ik~~~~iPvi~~------Gg----it~e~a~~~l~---~g~aD~V 305 (362)
T 4ab4_A 242 ETFTYVARELGKRGIAFICSREREADD---SIGPLIKEAFGGPYIVN------ER----FDKASANAALA---SGKADAV 305 (362)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCCTT---CCHHHHHHHHCSCEEEE------SS----CCHHHHHHHHH---TTSCSEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCCCCCH---HHHHHHHHHCCCCEEEe------CC----CCHHHHHHHHH---cCCccEE
Confidence 445667888889999998543211100 12334443336788762 22 24566554443 4568888
Q ss_pred EeCCC---ChhhHHH
Q psy15811 232 GVNCV---RPSHVST 243 (581)
Q Consensus 232 GvNC~---~p~~~~~ 243 (581)
++-=. .|+...+
T Consensus 306 ~iGR~~lanPdl~~k 320 (362)
T 4ab4_A 306 AFGVPFIANPDLPAR 320 (362)
T ss_dssp EESHHHHHCTTHHHH
T ss_pred EECHHhHhCcHHHHH
Confidence 87542 5654433
No 246
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=54.23 E-value=51 Score=32.38 Aligned_cols=64 Identities=16% Similarity=0.063 Sum_probs=46.7
Q ss_pred HHHHHHHCCCcEEEEEc-cCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCC
Q psy15811 157 NVEALVRAGVDYLALET-IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 235 (581)
Q Consensus 157 q~~~l~~~gvD~l~~ET-~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC 235 (581)
|+....+.|+|.+++=+ .-+..+++..++.+++. ++-+++.. .+.+++-.++ ..+++.||+|=
T Consensus 134 qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~l-Gl~~lvev-----------h~~eEl~~A~----~~ga~iIGinn 197 (272)
T 3tsm_A 134 QVYEARSWGADCILIIMASVDDDLAKELEDTAFAL-GMDALIEV-----------HDEAEMERAL----KLSSRLLGVNN 197 (272)
T ss_dssp HHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHT-TCEEEEEE-----------CSHHHHHHHT----TSCCSEEEEEC
T ss_pred HHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHc-CCeEEEEe-----------CCHHHHHHHH----hcCCCEEEECC
Confidence 67777789999987774 55677888888888886 77777644 2455654333 57899999996
Q ss_pred C
Q psy15811 236 V 236 (581)
Q Consensus 236 ~ 236 (581)
.
T Consensus 198 r 198 (272)
T 3tsm_A 198 R 198 (272)
T ss_dssp B
T ss_pred C
Confidence 3
No 247
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=54.11 E-value=74 Score=30.47 Aligned_cols=97 Identities=13% Similarity=0.216 Sum_probs=59.6
Q ss_pred HHHHHHHHCCCcEEEEEccC--CHHHHHHHHHHHHhcCCCcEEEEEEEc---------CCCcCCCCCCHHHHHHHHHhhC
Q psy15811 156 PNVEALVRAGVDYLALETIP--AEKEALALVKLLREFPGQKAWLSFSCK---------DDTHTSHGELISSAVTSCLLAN 224 (581)
Q Consensus 156 ~q~~~l~~~gvD~l~~ET~~--~~~E~~aa~~a~~~~~~~pv~isft~~---------~~g~l~~G~~~~~~~~~~~~~~ 224 (581)
++++.+++.|+|-+++=|.. +.+-+ -++++++....+++|+-+. .+++..++.++.+.+..+.
T Consensus 88 e~~~~~l~~GadkVii~t~a~~~p~li---~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~--- 161 (243)
T 4gj1_A 88 EEVKALLDCGVKRVVIGSMAIKDATLC---LEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYS--- 161 (243)
T ss_dssp HHHHHHHHTTCSEEEECTTTTTCHHHH---HHHHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHH---
T ss_pred HHHHHHHHcCCCEEEEccccccCCchH---HHHHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHh---
Confidence 35677889999999998754 44333 3445555556677777652 1334556777888887765
Q ss_pred CCCceEEEeCCC-------ChhhHHHHHHHHHhhCCCCceEEe
Q psy15811 225 PDQIQAIGVNCV-------RPSHVSTLVRCIKQSHPTVQTIVY 260 (581)
Q Consensus 225 ~~~~~~vGvNC~-------~p~~~~~~l~~l~~~~~~~p~~~~ 260 (581)
..++.-+-+|+. ||+ .++++.+.+..+++|+++.
T Consensus 162 ~~g~~eil~t~Id~DGt~~G~d--~~l~~~l~~~~~~ipvias 202 (243)
T 4gj1_A 162 NKGLKHILCTDISKDGTMQGVN--VRLYKLIHEIFPNICIQAS 202 (243)
T ss_dssp TTTCCEEEEEETTC-----CCC--HHHHHHHHHHCTTSEEEEE
T ss_pred hcCCcEEEeeeecccccccCCC--HHHHHHHHHhcCCCCEEEE
Confidence 477777777763 444 2577777765346777654
No 248
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=53.65 E-value=2e+02 Score=29.44 Aligned_cols=127 Identities=18% Similarity=0.179 Sum_probs=75.2
Q ss_pred HHHHHhccccccccccccccccHhhcCCCHHHHHHHHHHHHHHHHHHhhhhcCCCcccccccccccCCCeEEEeecCCcC
Q psy15811 49 RDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128 (581)
Q Consensus 49 ~~yl~AGAdiI~TnTf~a~~~~l~~~g~~~~~~~~i~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~~~~~VagsiGP~g 128 (581)
+.-+++|+++|.... .+|......++.+.+++.+..+.+++.|++.-. ...|..|+-
T Consensus 81 ~~a~~~g~~~v~i~~-~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~-------------------~~~v~~~~e--- 137 (382)
T 2ztj_A 81 KVAVETGVQGIDLLF-GTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAP-------------------HVEVRFSAE--- 137 (382)
T ss_dssp HHHHHTTCSEEEEEE-CC--------CCCHHHHHHHHHHHHHHHHHHCT-------------------TSEEEEEET---
T ss_pred HHHHHcCCCEEEEEe-ccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCC-------------------CEEEEEEEE---
Confidence 344578999765421 222222224666767766777777777766521 123444432
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEE-EccC--CHHHHHHHHHHHHhc--CCCcEEEEEEEcC
Q psy15811 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL-ETIP--AEKEALALVKLLREF--PGQKAWLSFSCKD 203 (581)
Q Consensus 129 ~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~-ET~~--~~~E~~aa~~a~~~~--~~~pv~isft~~~ 203 (581)
+ ++ ..+ .+++.+.++.+.+. +|.|-+ -|.. ...++...++.+++. ++.| ++|-+=+
T Consensus 138 d----~~--------~~~----~~~~~~~~~~~~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~--i~~H~Hn 198 (382)
T 2ztj_A 138 D----TF--------RSE----EQDLLAVYEAVAPY-VDRVGLADTVGVATPRQVYALVREVRRVVGPRVD--IEFHGHN 198 (382)
T ss_dssp T----TT--------TSC----HHHHHHHHHHHGGG-CSEEEEEETTSCCCHHHHHHHHHHHHHHHTTTSE--EEEEEBC
T ss_pred e----CC--------CCC----HHHHHHHHHHHHHh-cCEEEecCCCCCCCHHHHHHHHHHHHHhcCCCCe--EEEEeCC
Confidence 1 10 122 25677778888888 998855 4654 788899999999875 4444 6777765
Q ss_pred CCcCCCCCCHHHHHHHHH
Q psy15811 204 DTHTSHGELISSAVTSCL 221 (581)
Q Consensus 204 ~g~l~~G~~~~~~~~~~~ 221 (581)
+ .|..+..++.++.
T Consensus 199 d----~GlAvAN~laAv~ 212 (382)
T 2ztj_A 199 D----TGCAIANAYEAIE 212 (382)
T ss_dssp T----TSCHHHHHHHHHH
T ss_pred C----ccHHHHHHHHHHH
Confidence 4 5777777776664
No 249
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=53.33 E-value=80 Score=32.26 Aligned_cols=113 Identities=12% Similarity=0.057 Sum_probs=66.5
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEecc----------cCC------------HHH---HHHHHHHHHhcCC-CeEEEEE
Q psy15811 402 TEADLIAWHRPNVEALVRAGVDYLALET----------IPA------------EKE---ALALVKLLREFPG-QKAWLSF 455 (581)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~~gvD~i~~ET----------~p~------------~~E---a~a~~~~~~~~~~-~pv~iSf 455 (581)
+.+++.+.|.+.++.+.++|.|.|=+-- .|. ... +..+++++|+..+ -||.+-+
T Consensus 155 eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrl 234 (364)
T 1vyr_A 155 EIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRV 234 (364)
T ss_dssp GHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 3466677888888888899999985521 121 122 4455666765432 2888877
Q ss_pred EEcCCCc-C-CCCCcHHHHHHHHHhhCCCCceEEEECCC----CCccchHHHHHHHhhCCCCeEEE
Q psy15811 456 SCKDDTH-T-SHGELISSAVTSCLLANPDQIQAIGVNCV----RPSHVSTLVRCIKQSHPTVQTIV 515 (581)
Q Consensus 456 t~~~~~~-l-~~G~~~~~~~~~l~~~~~~~~~~iGiNC~----~p~~~~~~l~~l~~~~~~~pl~~ 515 (581)
+..+.-. + .++.++++++..+..+...+++.|-+-+. .|..-...++.+++.. ++|+++
T Consensus 235 s~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~-~iPvi~ 299 (364)
T 1vyr_A 235 SPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERF-HGVIIG 299 (364)
T ss_dssp CCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHC-CSEEEE
T ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHC-CCCEEE
Confidence 6543211 1 24557776655444344557787777652 1222245677787776 688764
No 250
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=53.23 E-value=1.1e+02 Score=30.86 Aligned_cols=65 Identities=17% Similarity=0.256 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHCCCcEEEE-EccC--CHHHHHHHHHHHHhc-CCCcEEEEEEEcCCCcCCCCCCHHHHHHHHH
Q psy15811 151 IAWHRPNVEALVRAGVDYLAL-ETIP--AEKEALALVKLLREF-PGQKAWLSFSCKDDTHTSHGELISSAVTSCL 221 (581)
Q Consensus 151 ~~~~~~q~~~l~~~gvD~l~~-ET~~--~~~E~~aa~~a~~~~-~~~pv~isft~~~~g~l~~G~~~~~~~~~~~ 221 (581)
.+++.+.++.+.+.|+|.|-+ -|+. ...++...++++++. +++| ++|-+=++ .|..+..++.++.
T Consensus 168 ~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~~~--i~~H~Hnd----~GlA~AN~laAv~ 236 (337)
T 3ble_A 168 PDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIH--FEFHGHND----YDLSVANSLQAIR 236 (337)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTTSC--EEEECBCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCCCe--EEEEecCC----cchHHHHHHHHHH
Confidence 356788888999999999855 4654 788899999999853 3444 56665543 5777777766653
No 251
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=53.18 E-value=14 Score=38.95 Aligned_cols=34 Identities=18% Similarity=0.192 Sum_probs=30.1
Q ss_pred HHHHHHHHHCCCcEEEEEc-cCCHHHHHHHHHHHHh
Q psy15811 155 RPNVEALVRAGVDYLALET-IPAEKEALALVKLLRE 189 (581)
Q Consensus 155 ~~q~~~l~~~gvD~l~~ET-~~~~~E~~aa~~a~~~ 189 (581)
-+++.++.+ |+|+|++|| .++.+|++..+++++.
T Consensus 270 I~Ra~AYa~-gAD~if~e~~~~~~eei~~f~~~v~~ 304 (429)
T 1f8m_A 270 IARAKAYAP-FADLIWMETGTPDLEAARQFSEAVKA 304 (429)
T ss_dssp HHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHh-cCCEEEeCCCCCCHHHHHHHHHHhcc
Confidence 456788888 899999998 8999999999999984
No 252
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=53.03 E-value=98 Score=31.58 Aligned_cols=65 Identities=15% Similarity=0.164 Sum_probs=43.2
Q ss_pred HHHHHHHHHCCCcEEEEEccC-CHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEe
Q psy15811 155 RPNVEALVRAGVDYLALETIP-AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGV 233 (581)
Q Consensus 155 ~~q~~~l~~~gvD~l~~ET~~-~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGv 233 (581)
.++++.++++|||+|.+-+-. +.......++.+++.-+.|+++... .+.+++ ..+. ..|+++|.+
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~~~~Vivg~v----------~t~e~A-~~l~---~aGaD~I~V 172 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNV----------VTEEAT-KELI---ENGADGIKV 172 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHCCCEEEEEEE----------CSHHHH-HHHH---HTTCSEEEE
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhcCCcEEEccC----------CCHHHH-HHHH---HcCcCEEEE
Confidence 567899999999999886543 4455566677776533789887321 335444 3443 378888887
No 253
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=52.85 E-value=88 Score=29.73 Aligned_cols=50 Identities=8% Similarity=0.179 Sum_probs=37.4
Q ss_pred HHHHHHHhCCCCEEEec-----ccCCHHHHHHHHHHHHhcC-CCeEEEEEEEcCCC
Q psy15811 412 PNVEALVRAGVDYLALE-----TIPAEKEALALVKLLREFP-GQKAWLSFSCKDDT 461 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~E-----T~p~~~Ea~a~~~~~~~~~-~~pv~iSft~~~~~ 461 (581)
+.++.+.++|+|.+=+- ..|++.....+++.+|+.+ ++|+-+++-+.+.+
T Consensus 22 ~~i~~~~~~g~d~iHvDvmDg~fvpn~t~G~~~v~~lr~~~p~~~~dvhLmv~dp~ 77 (227)
T 1tqx_A 22 EETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTKSIFFDVHLMVEYPE 77 (227)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCCCHHHHHHHGGGCSSCEEEEEEESSCGG
T ss_pred HHHHHHHHcCCCEEEEEEEeCCcCcchhcCHHHHHHHHHhCCCCcEEEEEEEcCHH
Confidence 56777778898875322 3467766678899999876 89999999887644
No 254
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=52.81 E-value=49 Score=39.48 Aligned_cols=102 Identities=8% Similarity=0.120 Sum_probs=63.7
Q ss_pred HHHHHHhCCCCEEE-ecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCC----CcHHHHHHHHHhhCCCCceEE
Q psy15811 413 NVEALVRAGVDYLA-LETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG----ELISSAVTSCLLANPDQIQAI 487 (581)
Q Consensus 413 ~~~~l~~~gvD~i~-~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G----~~~~~~~~~l~~~~~~~~~~i 487 (581)
-++...++|+|.|- |-.+.++..++..++.+++ .+..+-..+++.. +..++ .+++-+++.+......+++.|
T Consensus 650 ~i~~a~~~g~d~irif~sl~~~~~~~~~i~~~~~-~g~~v~~~i~~~~--~~~d~~r~~~~~~~~~~~~~~~~~~Ga~~i 726 (1165)
T 2qf7_A 650 FVRQAAKGGIDLFRVFDCLNWVENMRVSMDAIAE-ENKLCEAAICYTG--DILNSARPKYDLKYYTNLAVELEKAGAHII 726 (1165)
T ss_dssp HHHHHHHHTCCEEEEECTTCCGGGGHHHHHHHHH-TTCEEEEEEECCS--CTTCTTSGGGCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHhcCcCEEEEEeeHHHHHHHHHHHHHHHh-ccceEEEEEEEec--cccCCCCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 45566678999963 4445567778888888887 4665554444321 11122 344444443332344566777
Q ss_pred EECC----CCCccchHHHHHHHhhCCCCeEEEeeC
Q psy15811 488 GVNC----VRPSHVSTLVRCIKQSHPTVQTIVYPN 518 (581)
Q Consensus 488 GiNC----~~p~~~~~~l~~l~~~~~~~pl~~ypN 518 (581)
.+-- ..|..+..+++.++... ++|+.+...
T Consensus 727 ~l~DT~G~~~P~~~~~lv~~l~~~~-~~~i~~H~H 760 (1165)
T 2qf7_A 727 AVKDMAGLLKPAAAKVLFKALREAT-GLPIHFHTH 760 (1165)
T ss_dssp EEEETTCCCCHHHHHHHHHHHHHHC-SSCEEEEEC
T ss_pred EEeCccCCcCHHHHHHHHHHHHHhc-CCeEEEEEC
Confidence 6654 36889999999998876 688877764
No 255
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=52.78 E-value=90 Score=35.08 Aligned_cols=106 Identities=10% Similarity=0.100 Sum_probs=68.7
Q ss_pred HHHHHHHHHCCCcEE-EEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEc---CCCcCCCCCCHHHHHHHHHhhCCCCceE
Q psy15811 155 RPNVEALVRAGVDYL-ALETIPAEKEALALVKLLREFPGQKAWLSFSCK---DDTHTSHGELISSAVTSCLLANPDQIQA 230 (581)
Q Consensus 155 ~~q~~~l~~~gvD~l-~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~---~~g~l~~G~~~~~~~~~~~~~~~~~~~~ 230 (581)
..-++...++|+|.| +|=..++++.++..++.+++. +..+...+++. .+. .+...+++..+..+..+...|++.
T Consensus 200 ~~~i~~a~~~Gvd~irIf~s~n~l~~l~~~i~~ak~~-G~~v~~~i~~~~d~~dp-~r~~~~~e~~~~~a~~l~~~Ga~~ 277 (718)
T 3bg3_A 200 FKFCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSA-GGVVEAAISYTGDVADP-SRTKYSLQYYMGLAEELVRAGTHI 277 (718)
T ss_dssp HHHHHHHHHHTCCEEEEECSSCCHHHHHHHHHHHHTT-TSEEEEEEECCSCTTCT-TCCTTCHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHhcCcCEEEEEecHHHHHHHHHHHHHHHHc-CCeEEEEEEeeccccCC-CCCCCCHHHHHHHHHHHHHcCCCE
Confidence 344566677899997 455667888888888888875 55444333332 111 111235655554443333578888
Q ss_pred EEeCCC----ChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 231 IGVNCV----RPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 231 vGvNC~----~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
|.+-=+ .|..+..+++.+++...++||.+...
T Consensus 278 I~l~DT~G~~~P~~v~~lV~~lk~~~p~~~I~~H~H 313 (718)
T 3bg3_A 278 LCIKDMAGLLKPTACTMLVSSLRDRFPDLPLHIHTH 313 (718)
T ss_dssp EEEECTTSCCCHHHHHHHHHHHHHHSTTCCEEEECC
T ss_pred EEEcCcCCCcCHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 887644 49999999999998634788887654
No 256
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=52.52 E-value=37 Score=32.75 Aligned_cols=148 Identities=14% Similarity=0.112 Sum_probs=77.7
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhh
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 479 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~ 479 (581)
..+.+++.+...+.++.|.+.|+|+|++-....- ..+++.+++..++||+ ++ ++.+++.+...
T Consensus 41 ~~s~~~i~~~~~~~~~~L~~~g~d~iviaCnTa~---~~~~~~lr~~~~iPvi-gi-------------~e~~~~~A~~~ 103 (254)
T 1b73_A 41 IRSKDTIIRYSLECAGFLKDKGVDIIVVACNTAS---AYALERLKKEINVPVF-GV-------------IEPGVKEALKK 103 (254)
T ss_dssp TSCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHH---TTSHHHHHHHSSSCEE-ES-------------HHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhh---HHHHHHHHHhCCCCEE-ee-------------eHHHHHHHHHc
Confidence 3678999999999999999999999998765431 1246666765689976 21 23344443211
Q ss_pred CCCCceEEEECCCCCccchHHHHHHHhhCCCCeEEEeeCCCCCcccccccccC-CcCHHHHHHHHHHHHHc-CCcEEeec
Q psy15811 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLD-TEDEYSILHYVPQWLEE-GVNIIGGC 557 (581)
Q Consensus 480 ~~~~~~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~-~~~~~~~~~~~~~w~~~-G~~iiGGC 557 (581)
... .-|||=.+.........+.+-.. .+..+...|..+.+.... .++.. ......+.++++++.+. .+ ||=||
T Consensus 104 ~~~--~rigVlaT~~T~~~~~y~~~l~~-~g~~v~~~~~~~~v~~ie-~g~~~~~~~~~~l~~~~~~l~~~~d~-IILGC 178 (254)
T 1b73_A 104 SRN--KKIGVIGTPATVKSGAYQRKLEE-GGADVFAKACPLFAPLAE-EGLLEGEITRKVVEHYLKEFKGKIDT-LILGC 178 (254)
T ss_dssp CSS--CEEEEEECHHHHHHCHHHHHHHT-TSCEEEEEECCCCTTTSC-GGGGSGGGHHHHHHHHSTTTTTTCSE-EEECC
T ss_pred cCC--CEEEEEEChHHhhhHHHHHHHHc-CCCEEEecCCHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHhcCCE-EEECc
Confidence 122 24566554333222233322222 245665566554443332 22222 11233555666665443 33 44456
Q ss_pred CCCchHHHHHHHH
Q psy15811 558 CEVTSYEIQQMRI 570 (581)
Q Consensus 558 CGt~P~hI~al~~ 570 (581)
-.-.. -.+.+.+
T Consensus 179 T~~p~-l~~~i~~ 190 (254)
T 1b73_A 179 THYPL-LKKEIKK 190 (254)
T ss_dssp CCTTC-CHHHHHH
T ss_pred cChHH-HHHHHHH
Confidence 55544 3344443
No 257
>3rpd_A Methionine synthase (B12-independent); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, rossmann fold, Zn, TRA; HET: MSE; 1.50A {Shewanella SP}
Probab=52.42 E-value=76 Score=32.39 Aligned_cols=144 Identities=13% Similarity=0.087 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEecccCC----HHHH-HHHHHHHHhc---CCCeEEEEEEEcCC--------CcCCCC
Q psy15811 403 EADLIAWHRPNVEALVRAGVDYLALETIPA----EKEA-LALVKLLREF---PGQKAWLSFSCKDD--------THTSHG 466 (581)
Q Consensus 403 ~~~~~~~~~~~~~~l~~~gvD~i~~ET~p~----~~Ea-~a~~~~~~~~---~~~pv~iSft~~~~--------~~l~~G 466 (581)
..++...|++-++.|.++|+|.|-+.. |. ..+. ..+++++++. ...++.+|+|.-.. ......
T Consensus 166 ~~dlA~a~~~ei~~l~~aG~~~IQiDe-P~l~~~~~~~~~~~v~~~n~~~~~~~~~~~iHiC~G~~~~~n~d~~~t~~~~ 244 (357)
T 3rpd_A 166 AWEFAKILNEEAKELEAAGVDIIQFDE-PAFNVFFDEVNDWGIACLERAIEGLKCETAVHICYGYGIKANTDWKKTLGSE 244 (357)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEC-GGGGTCHHHHHHTHHHHHHHHHTTCCSEEEEEECSCCSSHHHHHHHTTSCSC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecC-ccccccHHHHHHHHHHHHHHHHhCCCCceEEEEecCCccCCccccccccccc
Confidence 467899999999999999999986653 22 2222 3345555531 23456667654210 001110
Q ss_pred -CcHHHHHHHHHhhCCCCceEEEECCCCCccchHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHH
Q psy15811 467 -ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQ 545 (581)
Q Consensus 467 -~~~~~~~~~l~~~~~~~~~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (581)
-.+.+++..+. ...+++|.+-+..+..-..+++.+.. ..+-+++++-.. .+ -++++++.+.+++
T Consensus 245 ~g~y~~i~~~l~---~~~~D~i~lE~~~~r~~~e~l~~~~~--k~v~lGvvd~~s--------~~--ve~~eev~~ri~~ 309 (357)
T 3rpd_A 245 WRQYEEVFPKLQ---KSNIDIISLECHNSHVPMELLELIRG--KKVMVGAIDVAT--------DT--IETAEEVADTLRK 309 (357)
T ss_dssp CCGGGGTHHHHH---HSSCCEEEECCTTCCCCGGGGGGGTT--SEEEEECSCTTC--------SS--CCCHHHHHHHHHH
T ss_pred cCcHHHHHHHHH---hCCCCEEEEEecCCCCChHHHHhcCC--CEEEeccccCcC--------CC--CCCHHHHHHHHHH
Confidence 13455556652 24778999998543221234443321 123333333321 11 2357888888888
Q ss_pred HHHc-CCc--EEeecCCCch
Q psy15811 546 WLEE-GVN--IIGGCCEVTS 562 (581)
Q Consensus 546 w~~~-G~~--iiGGCCGt~P 562 (581)
.++. |.. ++.=.||..+
T Consensus 310 a~~~v~~~~l~lsPdCGl~~ 329 (357)
T 3rpd_A 310 ALKFVDADKLYPCTNCGMTP 329 (357)
T ss_dssp HHTTSCGGGEEEECSSCCTT
T ss_pred HHHhCCcccEEEeCCCCCCC
Confidence 7653 655 8999999654
No 258
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=52.38 E-value=76 Score=32.46 Aligned_cols=77 Identities=16% Similarity=0.077 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEE
Q psy15811 152 AWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 231 (581)
Q Consensus 152 ~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~v 231 (581)
+.+.+.++.|.+.|+|+|-+=.-..-. ..++.+|+.-+.||++. |. -+.+++.+.+. ...+|.|
T Consensus 250 ~~~~~la~~l~~~Gvd~i~v~~~~~~~---~~~~~ik~~~~iPvi~~------Gg----it~e~a~~~l~---~G~aD~V 313 (361)
T 3gka_A 250 ATFGHVARELGRRRIAFLFARESFGGD---AIGQQLKAAFGGPFIVN------EN----FTLDSAQAALD---AGQADAV 313 (361)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSTT---CCHHHHHHHHCSCEEEE------SS----CCHHHHHHHHH---TTSCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCH---HHHHHHHHHcCCCEEEe------CC----CCHHHHHHHHH---cCCccEE
Confidence 345667888889999998543211100 12344443336787752 22 24666554443 4568888
Q ss_pred EeCC---CChhhHHHH
Q psy15811 232 GVNC---VRPSHVSTL 244 (581)
Q Consensus 232 GvNC---~~p~~~~~~ 244 (581)
++-= ..|+...++
T Consensus 314 ~iGR~~ladPdl~~k~ 329 (361)
T 3gka_A 314 AWGKLFIANPDLPRRF 329 (361)
T ss_dssp EESHHHHHCTTHHHHH
T ss_pred EECHHhHhCcHHHHHH
Confidence 8854 257644333
No 259
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=52.34 E-value=1.4e+02 Score=30.51 Aligned_cols=79 Identities=11% Similarity=0.012 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHCCCcEEEEEc--cCCHHH--HHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCc
Q psy15811 153 WHRPNVEALVRAGVDYLALET--IPAEKE--ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 228 (581)
Q Consensus 153 ~~~~q~~~l~~~gvD~l~~ET--~~~~~E--~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~ 228 (581)
.+.+.++.|.+.|+|+|-+=. +..... -...++.+|+..+.||++. |.. +.+++.+.+. ..++
T Consensus 256 ~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~~------Ggi----~~~~a~~~l~---~g~a 322 (377)
T 2r14_A 256 MAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIYC------GNY----DAGRAQARLD---DNTA 322 (377)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCCSEEEEE------SSC----CHHHHHHHHH---TTSC
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCCCEEEE------CCC----CHHHHHHHHH---CCCc
Confidence 356678888899999986521 110000 0122344554447888762 323 3666554443 4568
Q ss_pred eEEEeCCC---ChhhHHHH
Q psy15811 229 QAIGVNCV---RPSHVSTL 244 (581)
Q Consensus 229 ~~vGvNC~---~p~~~~~~ 244 (581)
|+|++-=. .|+...++
T Consensus 323 D~V~igR~~l~~P~l~~k~ 341 (377)
T 2r14_A 323 DAVAFGRPFIANPDLPERF 341 (377)
T ss_dssp SEEEESHHHHHCTTHHHHH
T ss_pred eEEeecHHHHhCchHHHHH
Confidence 99888652 57655444
No 260
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=52.30 E-value=62 Score=31.39 Aligned_cols=64 Identities=14% Similarity=0.178 Sum_probs=46.3
Q ss_pred HHHHHHHCCCcEEEEE-ccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCC-CceEEEeC
Q psy15811 157 NVEALVRAGVDYLALE-TIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPD-QIQAIGVN 234 (581)
Q Consensus 157 q~~~l~~~gvD~l~~E-T~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~-~~~~vGvN 234 (581)
|+.-....|+|.+++= ++-+..+++..++.+++. ++-+++-. .+.+++-..+ .. +++.||+|
T Consensus 115 qi~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~l-Gl~~lvEv-----------~~~eE~~~A~----~l~g~~iIGin 178 (251)
T 1i4n_A 115 QVKLASSVGADAILIIARILTAEQIKEIYEAAEEL-GMDSLVEV-----------HSREDLEKVF----SVIRPKIIGIN 178 (251)
T ss_dssp HHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTT-TCEEEEEE-----------CSHHHHHHHH----TTCCCSEEEEE
T ss_pred HHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHc-CCeEEEEe-----------CCHHHHHHHH----hcCCCCEEEEe
Confidence 5666778999998766 555668899999999886 88777633 2345543332 46 89999999
Q ss_pred CC
Q psy15811 235 CV 236 (581)
Q Consensus 235 C~ 236 (581)
=.
T Consensus 179 nr 180 (251)
T 1i4n_A 179 TR 180 (251)
T ss_dssp CB
T ss_pred Cc
Confidence 84
No 261
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=52.16 E-value=1.8e+02 Score=28.53 Aligned_cols=117 Identities=9% Similarity=0.105 Sum_probs=68.5
Q ss_pred CeEEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEEEc---cCC------HHHHHHHHHHH
Q psy15811 117 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET---IPA------EKEALALVKLL 187 (581)
Q Consensus 117 ~~~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~ET---~~~------~~E~~aa~~a~ 187 (581)
+..|.|=|=++++++++|.. ..+.+++ .++++.+++.|+|+|=+=- =|. .+|...++.++
T Consensus 14 ~~~imGilN~TpdSFsdgg~-------~~~~~~a----~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi 82 (282)
T 1aj0_A 14 HPHVMGILNVTPDSFSDGGT-------HNSLIDA----VKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVV 82 (282)
T ss_dssp SCEEEEEEECCTTTSCCCCC-------CTHHHHH----HHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCccccccc-------cCCHHHH----HHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHH
Confidence 56799999999998877632 2344444 4466777889999974443 233 77877666665
Q ss_pred Hhc---CCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEE-EeCCCChhhHHHHHHHHHhhCCCCceEEecCC
Q psy15811 188 REF---PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI-GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNK 263 (581)
Q Consensus 188 ~~~---~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~v-GvNC~~p~~~~~~l~~l~~~~~~~p~~~~pna 263 (581)
+.. .++|+- +++ ... ++++++.+ .|++.| -++...-..|.++++ + .+.|++++++.
T Consensus 83 ~~l~~~~~~piS----IDT-------~~~-~va~aAl~---aGa~iINdvsg~~d~~~~~~~a---~--~~~~vVlmh~~ 142 (282)
T 1aj0_A 83 EAIAQRFEVWIS----VDT-------SKP-EVIRESAK---VGAHIINDIRSLSEPGALEAAA---E--TGLPVCLMHMQ 142 (282)
T ss_dssp HHHHHHCCCEEE----EEC-------CCH-HHHHHHHH---TTCCEEEETTTTCSTTHHHHHH---H--HTCCEEEECCS
T ss_pred HHHHhhcCCeEE----EeC-------CCH-HHHHHHHH---cCCCEEEECCCCCCHHHHHHHH---H--hCCeEEEEccC
Confidence 532 256543 332 222 34444444 355433 444432234545443 3 36789999887
Q ss_pred C
Q psy15811 264 G 264 (581)
Q Consensus 264 g 264 (581)
|
T Consensus 143 G 143 (282)
T 1aj0_A 143 G 143 (282)
T ss_dssp S
T ss_pred C
Confidence 6
No 262
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=52.04 E-value=81 Score=29.96 Aligned_cols=87 Identities=11% Similarity=0.069 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCc-CCCCCCHHHHHHHHHhhCCCCceEE
Q psy15811 153 WHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTH-TSHGELISSAVTSCLLANPDQIQAI 231 (581)
Q Consensus 153 ~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~-l~~G~~~~~~~~~~~~~~~~~~~~v 231 (581)
...+++++..++|+..|-+.+ .+ .++.+|+..++|++-...-+-.++ ..-+.+++++- .+. ..|++.|
T Consensus 37 ~~~~~A~a~~~~Ga~~i~~~~---~~----~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~-~~~---~aGad~I 105 (229)
T 3q58_A 37 IVAAMAQAAASAGAVAVRIEG---IE----NLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVD-ALA---QAGADII 105 (229)
T ss_dssp HHHHHHHHHHHTTCSEEEEES---HH----HHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHH-HHH---HHTCSEE
T ss_pred hHHHHHHHHHHCCCcEEEECC---HH----HHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHH-HHH---HcCCCEE
Confidence 456778888999999998865 33 345666656899874311111111 11123444443 333 3689999
Q ss_pred EeCCC---ChhhHHHHHHHHHh
Q psy15811 232 GVNCV---RPSHVSTLVRCIKQ 250 (581)
Q Consensus 232 GvNC~---~p~~~~~~l~~l~~ 250 (581)
-++|+ .|+.+.++++.++.
T Consensus 106 ~l~~~~~~~p~~l~~~i~~~~~ 127 (229)
T 3q58_A 106 AFDASFRSRPVDIDSLLTRIRL 127 (229)
T ss_dssp EEECCSSCCSSCHHHHHHHHHH
T ss_pred EECccccCChHHHHHHHHHHHH
Confidence 99997 48888888888876
No 263
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=51.98 E-value=91 Score=33.28 Aligned_cols=66 Identities=17% Similarity=0.279 Sum_probs=41.5
Q ss_pred HHHHHHHHHHCCCcEEEEEcc-CCHHHHHHHHHHHHhc-CCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEE
Q psy15811 154 HRPNVEALVRAGVDYLALETI-PAEKEALALVKLLREF-PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 231 (581)
Q Consensus 154 ~~~q~~~l~~~gvD~l~~ET~-~~~~E~~aa~~a~~~~-~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~v 231 (581)
..++++.++++|+|++.+-+- .+.......++.+++. +++||++- .+ .+.+.+ ..+. ..|+++|
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~-~v---------~t~~~a-~~l~---~aGad~I 321 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGG-NV---------VTAAQA-KNLI---DAGVDGL 321 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEE-EE---------CSHHHH-HHHH---HHTCSEE
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEec-cc---------chHHHH-HHHH---HcCCCEE
Confidence 356788899999999987443 3444455667777754 48898861 11 334444 3333 3678887
Q ss_pred Ee
Q psy15811 232 GV 233 (581)
Q Consensus 232 Gv 233 (581)
-+
T Consensus 322 ~v 323 (514)
T 1jcn_A 322 RV 323 (514)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 264
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=51.79 E-value=1.2e+02 Score=30.17 Aligned_cols=168 Identities=15% Similarity=0.110 Sum_probs=82.2
Q ss_pred CceEEeccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc---cCC------HHHHH---HHH
Q psy15811 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET---IPA------EKEAL---ALV 440 (581)
Q Consensus 373 ~v~VagsiGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l~~~gvD~i~~ET---~p~------~~Ea~---a~~ 440 (581)
+.+|.|=+-=++++|+||..|. +.+.+ .++++.+.+.|+|+|=+-- -|. .+|.. .++
T Consensus 28 ~~~iMGIlNvTPDSFsdgg~~~-------~~~~a----~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI 96 (294)
T 2dqw_A 28 RVRLLGVLNLTPDSFSDGGRYL-------DPERA----LERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVL 96 (294)
T ss_dssp SCEEEEEEECCC--------------------CC----HHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHH
T ss_pred CceEEEEEeCCCCCCCCCCCCC-------CHHHH----HHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHH
Confidence 3578888888889999987663 12222 2567778888999985543 232 33444 445
Q ss_pred HHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECCCCCccchHHHHHHHhhCCCCeEEEeeCC-
Q psy15811 441 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNK- 519 (581)
Q Consensus 441 ~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~ypNa- 519 (581)
+.+++. ++| +|+-. .+ . +++++..+. ++. -||-++-.....+++..+.. +.|+++.++.
T Consensus 97 ~~l~~~-~vp--iSIDT------~~---~-~Va~aAl~a---Ga~--iINdVsg~~d~~m~~v~a~~--~~~vVlmh~~e 156 (294)
T 2dqw_A 97 EAVLSL-GVP--VSVDT------RK---P-EVAEEALKL---GAH--LLNDVTGLRDERMVALAARH--GVAAVVMHMPV 156 (294)
T ss_dssp HHHHTT-CSC--EEEEC------SC---H-HHHHHHHHH---TCS--EEECSSCSCCHHHHHHHHHH--TCEEEEECCSS
T ss_pred HHHHhC-CCe--EEEEC------CC---H-HHHHHHHHh---CCC--EEEECCCCCChHHHHHHHHh--CCCEEEEcCCC
Confidence 555542 555 45521 11 2 233333222 334 57774433555666666666 5899999987
Q ss_pred CCCcccccccccCCcC-----HHHHHHHHHHHHHcCC-cEE---eecCCCchHHHHHHHHHHh
Q psy15811 520 GGVWDSVHMKWLDTED-----EYSILHYVPQWLEEGV-NII---GGCCEVTSYEIQQMRIMID 573 (581)
Q Consensus 520 g~~~~~~~~~~~~~~~-----~~~~~~~~~~w~~~G~-~ii---GGCCGt~P~hI~al~~~l~ 573 (581)
|.+.+..... .|. + .+.+.+.+....+.|+ +|| |=--|.+.+|--++-+.++
T Consensus 157 G~p~tm~~~~-~y~-dv~~ev~~~l~~~i~~a~~~Gi~~IilDPG~Gf~kt~~~n~~ll~~l~ 217 (294)
T 2dqw_A 157 PDPATMMAHA-RYR-DVVAEVKAFLEAQARRALSAGVPQVVLDPGFGFGKLLEHNLALLRRLD 217 (294)
T ss_dssp SCTTTGGGGC-CCS-SHHHHHHHHHHHHHHHHHHTTCSCEEEECCTTSSCCHHHHHHHHHTHH
T ss_pred CCCccccccC-ccc-cHHHHHHHHHHHHHHHHHHCCCCcEEEcCCCCcccCHHHHHHHHHHHH
Confidence 6553322110 111 1 1245556666777886 343 2113566665544444444
No 265
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=51.77 E-value=60 Score=30.83 Aligned_cols=131 Identities=11% Similarity=0.011 Sum_probs=71.5
Q ss_pred CCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECC-CCCccchHH
Q psy15811 422 VDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVSTL 500 (581)
Q Consensus 422 vD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC-~~p~~~~~~ 500 (581)
+|.+=+-+---..+...+++.+++..+.+++.-+-+.| .|++....++.+ ...+++.+-++. .+++.+..+
T Consensus 38 v~~~Kvg~~lf~~~G~~~v~~l~~~~g~~v~lD~Kl~D-----ipnTv~~~~~~~---~~~gad~vtvh~~~G~~~l~~~ 109 (228)
T 3m47_A 38 IDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVAD-----IPETNEKICRAT---FKAGADAIIVHGFPGADSVRAC 109 (228)
T ss_dssp CSEEEEEHHHHHHHCTHHHHHHHHHHCCEEEEEEEECS-----CHHHHHHHHHHH---HHTTCSEEEEESTTCHHHHHHH
T ss_pred ccEEEEcHHHHHhcCHHHHHHHHhcCCCeEEEEEeecc-----cHhHHHHHHHHH---HhCCCCEEEEeccCCHHHHHHH
Confidence 67653311111334456677777634678877665543 355566666666 235778888888 566677778
Q ss_pred HHHHHhhCCCCeEEE-eeCCCCCcccccccccCCcCHHHH-HHHHHHHHHcCCcEEeecCC-CchHHHHHHHHHHh
Q psy15811 501 VRCIKQSHPTVQTIV-YPNKGGVWDSVHMKWLDTEDEYSI-LHYVPQWLEEGVNIIGGCCE-VTSYEIQQMRIMID 573 (581)
Q Consensus 501 l~~l~~~~~~~pl~~-ypNag~~~~~~~~~~~~~~~~~~~-~~~~~~w~~~G~~iiGGCCG-t~P~hI~al~~~l~ 573 (581)
++.++..+ .-+.+ -+-+- .++.. ...+. .+.++...+.|+ .|=-|+ |.|+.++.|++...
T Consensus 110 ~~~~~~~g--~~v~vLt~~s~-------~~~~~--~~~~~~~~~a~~a~~~G~--~GvV~~at~~~e~~~ir~~~~ 172 (228)
T 3m47_A 110 LNVAEEMG--REVFLLTEMSH-------PGAEM--FIQGAADEIARMGVDLGV--KNYVGPSTRPERLSRLREIIG 172 (228)
T ss_dssp HHHHHHHT--CEEEEECCCCS-------GGGGT--THHHHHHHHHHHHHHTTC--CEEECCSSCHHHHHHHHHHHC
T ss_pred HHHHHhcC--CCeEEEEeCCC-------ccHHH--HHHHHHHHHHHHHHHhCC--cEEEECCCChHHHHHHHHhcC
Confidence 88777654 22222 11110 01110 11122 223333345574 455566 45889999998775
No 266
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=51.66 E-value=1.8e+02 Score=28.23 Aligned_cols=48 Identities=17% Similarity=0.030 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhCCCCEEEecccC-----------CHHHHHHHHHHHHhcCCCeEEEEEE
Q psy15811 408 AWHRPNVEALVRAGVDYLALETIP-----------AEKEALALVKLLREFPGQKAWLSFS 456 (581)
Q Consensus 408 ~~~~~~~~~l~~~gvD~i~~ET~p-----------~~~Ea~a~~~~~~~~~~~pv~iSft 456 (581)
+.-.+.++.+.++|+|++-+-++- .....+.+.+..++ .++|++.++-
T Consensus 37 e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~-~Gl~~~te~~ 95 (262)
T 1zco_A 37 EQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADE-YGLVTVTEVM 95 (262)
T ss_dssp HHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHH-HTCEEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHH-cCCcEEEeeC
Confidence 344567777888999999887763 04445555555555 5888877663
No 267
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=51.64 E-value=1.8e+02 Score=29.32 Aligned_cols=84 Identities=21% Similarity=0.184 Sum_probs=50.6
Q ss_pred HHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCC--CCHHHHHHHHHhhCCCCceEEEeCC
Q psy15811 158 VEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG--ELISSAVTSCLLANPDQIQAIGVNC 235 (581)
Q Consensus 158 ~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G--~~~~~~~~~~~~~~~~~~~~vGvNC 235 (581)
++.+.+.|+|+|-++.-.++.|++..+ . -.+.++--+++ .++.| +.+.+.+..+.+....+-..++..|
T Consensus 269 l~~l~~~g~d~i~~d~~~dl~~a~~~~------g-~~~~l~Gnldp--~~L~gt~e~i~~~v~~~l~~~g~~g~I~~~gh 339 (367)
T 1r3s_A 269 LEELAQAGYEVVGLDWTVAPKKARECV------G-KTVTLQGNLDP--CALYASEEEIGQLVKQMLDDFGPHRYIANLGH 339 (367)
T ss_dssp HHHHTTSSCSEEECCTTSCHHHHHHHH------C-SSSEEEEEECG--GGGGSCHHHHHHHHHHHHHHHCSSSEEEEESS
T ss_pred HHHHHhcCCCEEEeCCCCCHHHHHHHc------C-CCeEEEeCCCh--HHhcCCHHHHHHHHHHHHHHhCCCCeeecCCC
Confidence 456778999999999777887765432 2 22445555665 34444 3444555555442112467888889
Q ss_pred C-----ChhhHHHHHHHHHh
Q psy15811 236 V-----RPSHVSTLVRCIKQ 250 (581)
Q Consensus 236 ~-----~p~~~~~~l~~l~~ 250 (581)
+ .|+++..+++.+..
T Consensus 340 gi~~~~p~env~a~v~~v~~ 359 (367)
T 1r3s_A 340 GLYPDMDPEHVGAFVDAVHK 359 (367)
T ss_dssp CCCTTCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHH
Confidence 5 25677666666554
No 268
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=51.38 E-value=1e+02 Score=29.96 Aligned_cols=141 Identities=11% Similarity=0.079 Sum_probs=75.8
Q ss_pred CCHHHHHHHHHHHHHHHHh-CCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhh
Q psy15811 401 MTEADLIAWHRPNVEALVR-AGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 479 (581)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~-~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~ 479 (581)
.+.+++.++-.+.++.|.+ .|+|+|++-....- ..+++.+|+..++||+ ++ ++.+++.....
T Consensus 45 ~s~~~i~~~~~~~~~~L~~~~g~d~iViACNTas---~~~l~~lr~~~~iPVi-gi-------------iepa~~~A~~~ 107 (272)
T 1zuw_A 45 RPEEEVLQYTWELTNYLLENHHIKMLVIACNTAT---AIALDDIQRSVGIPVV-GV-------------IQPGARAAIKV 107 (272)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHHH---HHHHHHHHHHCSSCEE-ES-------------HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhhcCCCEEEEeCchhh---HHHHHHHHHHCCCCEE-cc-------------cHHHHHHHHHh
Confidence 6789999999999999999 99999998754421 2357788866789976 22 23333333211
Q ss_pred CCCCceEEEECCCCCccchHHH-HHHHhhCCCCeEEEeeCCCCCcccccccccC-CcCHHHHHHHHHHHHHcCC-cEEee
Q psy15811 480 NPDQIQAIGVNCVRPSHVSTLV-RCIKQSHPTVQTIVYPNKGGVWDSVHMKWLD-TEDEYSILHYVPQWLEEGV-NIIGG 556 (581)
Q Consensus 480 ~~~~~~~iGiNC~~p~~~~~~l-~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~-~~~~~~~~~~~~~w~~~G~-~iiGG 556 (581)
... .-|||=.+....-.... +.++...++.-+...|..+.+.... .++.. ......+.++++.+.+.|+ .||=|
T Consensus 108 ~~~--~rIgVlaT~~T~~s~~y~~~i~~~~~~~~v~~~~~~~~v~~ve-~g~~~~~~~~~~l~~~l~~l~~~~~D~iVLG 184 (272)
T 1zuw_A 108 TDN--QHIGVIGTENTIKSNAYEEALLALNPDLKVENLACPLLVPFVE-SGKFLDQTADEIVKTSLYPLKDTSIDSLILG 184 (272)
T ss_dssp CSS--SEEEEEECHHHHHTTHHHHHHHHHCTTCEEEEEECTTHHHHHT-SCCCCHHHHHHHHHHHHHHHHHSCCSEEEEE
T ss_pred cCC--CEEEEEEChhhhhhhHHHHHHHHhCCCCEEEeccCHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHhcCCCEEEEC
Confidence 222 24555443222111112 2233333245555555544222222 22221 1112346677777877775 34556
Q ss_pred cCCCc
Q psy15811 557 CCEVT 561 (581)
Q Consensus 557 CCGt~ 561 (581)
|-.-.
T Consensus 185 CTh~p 189 (272)
T 1zuw_A 185 CTHYP 189 (272)
T ss_dssp STTGG
T ss_pred ccCHH
Confidence 75543
No 269
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=51.25 E-value=2.1e+02 Score=28.90 Aligned_cols=114 Identities=12% Similarity=0.128 Sum_probs=69.9
Q ss_pred CCCCCHHH---HHHHHHHHHHHHHHCCCcEEEEE--------------cc--C-----CH----HHHHHHHHHHHhcC--
Q psy15811 142 VDSMTEAD---LIAWHRPNVEALVRAGVDYLALE--------------TI--P-----AE----KEALALVKLLREFP-- 191 (581)
Q Consensus 142 ~~~~~~~~---~~~~~~~q~~~l~~~gvD~l~~E--------------T~--~-----~~----~E~~aa~~a~~~~~-- 191 (581)
.+++|.+| +.+.|.+-++...++|.|.|=+= |- . ++ .=+..+++++|+..
T Consensus 130 p~~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~ 209 (343)
T 3kru_A 130 PRELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPE 209 (343)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCT
T ss_pred chhcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCc
Confidence 35677655 56778888888888999998554 10 0 11 22355677777643
Q ss_pred CCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC---------ChhhHHHHHHHHHhhCCCCceEE
Q psy15811 192 GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV---------RPSHVSTLVRCIKQSHPTVQTIV 259 (581)
Q Consensus 192 ~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~---------~p~~~~~~l~~l~~~~~~~p~~~ 259 (581)
+.||.+-++.. +....|.++++++..+...... +++|=+-.. .|....+.++.+++. .++|++.
T Consensus 210 d~pv~vRls~~--~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~-~~iPVi~ 282 (343)
T 3kru_A 210 NKPIFVRVSAD--DYMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKR-CNIKTSA 282 (343)
T ss_dssp TSCEEEEEECC--CSSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-HTCEEEE
T ss_pred cCCeEEEeech--hhhccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHh-cCcccce
Confidence 67998877764 2344577888777655544456 887777332 122234566667664 4566554
No 270
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=51.13 E-value=79 Score=30.24 Aligned_cols=105 Identities=14% Similarity=0.195 Sum_probs=64.0
Q ss_pred HHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCC---------CcCCCCCcHHHHHHHHHhhCCC
Q psy15811 412 PNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDD---------THTSHGELISSAVTSCLLANPD 482 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~---------~~l~~G~~~~~~~~~l~~~~~~ 482 (581)
+.++.+++.|+|-+.+-|..- .+-..+-++++++.+..+.+++.++.+ .+...+.++.+.++.+. ..
T Consensus 88 e~~~~~l~~GadkVii~t~a~-~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~---~~ 163 (243)
T 4gj1_A 88 EEVKALLDCGVKRVVIGSMAI-KDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYS---NK 163 (243)
T ss_dssp HHHHHHHHTTCSEEEECTTTT-TCHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHH---TT
T ss_pred HHHHHHHHcCCCEEEEccccc-cCCchHHHHHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHh---hc
Confidence 788889999999999987653 233445566666656677888876321 23345567788888773 34
Q ss_pred CceEEEECCCCCccc-----hHHHHHHHhhCCCCeEEEeeCCC
Q psy15811 483 QIQAIGVNCVRPSHV-----STLVRCIKQSHPTVQTIVYPNKG 520 (581)
Q Consensus 483 ~~~~iGiNC~~p~~~-----~~~l~~l~~~~~~~pl~~ypNag 520 (581)
++.-|-+++.+-+-+ ..+++.+....+.+|+++---.+
T Consensus 164 g~~eil~t~Id~DGt~~G~d~~l~~~l~~~~~~ipviasGGv~ 206 (243)
T 4gj1_A 164 GLKHILCTDISKDGTMQGVNVRLYKLIHEIFPNICIQASGGVA 206 (243)
T ss_dssp TCCEEEEEETTC-----CCCHHHHHHHHHHCTTSEEEEESCCC
T ss_pred CCcEEEeeeecccccccCCCHHHHHHHHHhcCCCCEEEEcCCC
Confidence 555666776432221 24677777654358887654444
No 271
>1ypx_A Putative vitamin-B12 independent methionine synth protein; alpha-beta protein; 2.60A {Listeria monocytogenes}
Probab=51.12 E-value=68 Score=32.93 Aligned_cols=144 Identities=15% Similarity=0.143 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEecccCCHHH--------------------HHHHHHHHHhc----C-CCeEEEEEEE
Q psy15811 403 EADLIAWHRPNVEALVRAGVDYLALETIPAEKE--------------------ALALVKLLREF----P-GQKAWLSFSC 457 (581)
Q Consensus 403 ~~~~~~~~~~~~~~l~~~gvD~i~~ET~p~~~E--------------------a~a~~~~~~~~----~-~~pv~iSft~ 457 (581)
.+++.+.|++-++.|.++|++.|=+-. |.+.+ ...+++++++. + +.++.+|+|.
T Consensus 162 ~~~la~a~~~ei~~l~~aG~~~IQiDe-P~l~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~n~~~~~~~~~~~i~~HiC~ 240 (375)
T 1ypx_A 162 ANDLATAYQKAIQAFYDAGCRYLQLDD-TSWSYLCSDEQREVVRQRGFDPETLQETYKNLINEAIKHKPADMVITMHICR 240 (375)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEE-CHHHHTTSCC--------CCSTTTHHHHHHHHHHHHTTTCCTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEecC-CchhhhhccchhcccccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEec
Confidence 478889999999999999999875433 21111 24445555532 2 4678888864
Q ss_pred cC--CCcCCCCCcHHHHHHHHHhhCCCCceEEEECCCCC-c-cchHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCC
Q psy15811 458 KD--DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP-S-HVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDT 533 (581)
Q Consensus 458 ~~--~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~~p-~-~~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~ 533 (581)
-+ .....+| .+.+++..+ .....+++|.+-+... . .+ ..|+.+...+..+-+++++-.. .+ -
T Consensus 241 gn~~s~~~~~g-~~~~i~~~l--~~~~~~d~i~lE~~~~r~g~~-e~L~~~~~~~~~v~lGvvd~~~--------~~--~ 306 (375)
T 1ypx_A 241 GNFRSTWIAEG-GYGPVAETL--FGKLNIDGFFLEYDNERSGDF-APLKYVTRPDLKIVLGLITSKT--------GE--L 306 (375)
T ss_dssp C-----------CCSGGGHHH--HTTCCCSEEEEECCSCC---C-CTTCCCCCTTCEEEEEEECSSS--------CC---
T ss_pred cccCCcccccc-chHHHHHHH--HhhCCCCEEEEEecCCCCCcH-HHHHHhhhcCCeEEEeeecCcC--------CC--C
Confidence 31 1223333 123444555 2245788999997322 2 22 2222222111123455554321 01 2
Q ss_pred cCHHHHHHHHHHHHHc-CCc--EEeecCCCc
Q psy15811 534 EDEYSILHYVPQWLEE-GVN--IIGGCCEVT 561 (581)
Q Consensus 534 ~~~~~~~~~~~~w~~~-G~~--iiGGCCGt~ 561 (581)
++++.+.+.+++..+. |.. ++.=-||-.
T Consensus 307 e~~e~v~~ri~~a~~~v~~e~l~lsPdCGl~ 337 (375)
T 1ypx_A 307 EDEAAIKARIEEASEIVPLSQLRLSPQCGFA 337 (375)
T ss_dssp CCSHHHHHHHHHHHHHSCGGGEEEEESSCCC
T ss_pred CCHHHHHHHHHHHHHhcCccceEecCCCCcc
Confidence 3577888888877765 876 788889877
No 272
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=51.05 E-value=1.6e+02 Score=29.21 Aligned_cols=117 Identities=9% Similarity=0.096 Sum_probs=65.0
Q ss_pred CeEEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEEEc---------cCCHHHHHHHH---
Q psy15811 117 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET---------IPAEKEALALV--- 184 (581)
Q Consensus 117 ~~~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~ET---------~~~~~E~~aa~--- 184 (581)
+..|.|=+=-+.+++++|+.| .+. +.-.++++.+++.|+|+|=+=- ++..+|+..++
T Consensus 39 ~~~iMgilNvTPDSFsdgg~~-------~~~----~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI 107 (297)
T 1tx2_A 39 KTLIMGILNVTPDSFSDGGSY-------NEV----DAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMI 107 (297)
T ss_dssp SCEEEEECCCCCCTTCSSCBH-------HHH----HHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCccccCCcc-------CCH----HHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHH
Confidence 567888888888887765322 122 3344566777789999985442 22367776666
Q ss_pred HHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEE-EeCCC-ChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 185 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI-GVNCV-RPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 185 ~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~v-GvNC~-~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
+++++..++|+.| + .... ++++++.+ .|++.| -+|-. .-+.|.+++ .+ .+.|++++.+
T Consensus 108 ~~l~~~~~vpiSI----D-------T~~~-~V~~aAl~---aGa~iINdvsg~~~d~~m~~~a---a~--~g~~vVlmh~ 167 (297)
T 1tx2_A 108 QAVSKEVKLPISI----D-------TYKA-EVAKQAIE---AGAHIINDIWGAKAEPKIAEVA---AH--YDVPIILMHN 167 (297)
T ss_dssp HHHHHHSCSCEEE----E-------CSCH-HHHHHHHH---HTCCEEEETTTTSSCTHHHHHH---HH--HTCCEEEECC
T ss_pred HHHHhcCCceEEE----e-------CCCH-HHHHHHHH---cCCCEEEECCCCCCCHHHHHHH---HH--hCCcEEEEeC
Confidence 5545433677543 2 1223 33344443 255544 22332 123444443 44 3578999888
Q ss_pred CC
Q psy15811 263 KG 264 (581)
Q Consensus 263 ag 264 (581)
.|
T Consensus 168 ~G 169 (297)
T 1tx2_A 168 RD 169 (297)
T ss_dssp CS
T ss_pred CC
Confidence 65
No 273
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=50.79 E-value=22 Score=34.99 Aligned_cols=49 Identities=16% Similarity=0.141 Sum_probs=39.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCcEEEEEccCCHHHHHH-HHHHHHhcCCCcEE
Q psy15811 144 SMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA-LVKLLREFPGQKAW 196 (581)
Q Consensus 144 ~~~~~~~~~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~a-a~~a~~~~~~~pv~ 196 (581)
..+.+++..+-.+-++.|.+.|+|++++=+.+ +.+ +++.+++..++|++
T Consensus 46 ~ks~~~i~~~~~~~~~~L~~~g~~~IVIACNT----a~~~al~~lr~~~~iPvi 95 (269)
T 3ist_A 46 PRDKEEVAKFTWEMTNFLVDRGIKMLVIACNT----ATAAALYDIREKLDIPVI 95 (269)
T ss_dssp TSCHHHHHHHHHHHHHHHHHTTCSEEEECCHH----HHHHHHHHHHHHCSSCEE
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCC----ccHHHHHHHHHhcCCCEE
Confidence 36889999999999999999999999986543 333 46777765578977
No 274
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=50.45 E-value=2e+02 Score=28.76 Aligned_cols=125 Identities=14% Similarity=0.043 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEE-------cCCCcCCCCCcHHHHHHHHHhhC
Q psy15811 408 AWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSC-------KDDTHTSHGELISSAVTSCLLAN 480 (581)
Q Consensus 408 ~~~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~-------~~~~~l~~G~~~~~~~~~l~~~~ 480 (581)
+.-+..+..+.+.|||.++. | +.+. +- +.++-.+.+..++-|+.- .+..+-..|.+++++++ +
T Consensus 71 ~~l~~~~~~~~~~Gvdavl~-~-~gi~--~d-~~Li~~L~~~tv~gs~~~ggl~g~~~~~d~~~~~~sVe~Avr-l---- 140 (307)
T 3fok_A 71 ELLERMAIALSRPGVDGVLG-T-PDII--DD-LAALGLLDDKIVVGSMNRGGLRGASFEMDDRYTGYNVSSMVD-R---- 140 (307)
T ss_dssp HHHHHHHHHHHSTTCCEEEE-C-HHHH--HH-HHHTTCCTTCEEEEECCCCSCTTCTTTTSCCCCSCCHHHHHH-H----
T ss_pred HHHHHHHHHHhccCCCEEEE-C-cchh--hc-ccceEEecCcccccccCccccccCCCCccccccccCHHHHHH-C----
Confidence 33466777788899999986 1 2221 11 122223456777766753 12233345668888875 3
Q ss_pred CCCceEEE----ECCCCCccchHHHHHHHhh-----CCCCeEEEe----eCCCCCcccccccccCCcCHHHHHHHHHHHH
Q psy15811 481 PDQIQAIG----VNCVRPSHVSTLVRCIKQS-----HPTVQTIVY----PNKGGVWDSVHMKWLDTEDEYSILHYVPQWL 547 (581)
Q Consensus 481 ~~~~~~iG----iNC~~p~~~~~~l~~l~~~-----~~~~pl~~y----pNag~~~~~~~~~~~~~~~~~~~~~~~~~w~ 547 (581)
++++++ ||=.++.. ...|+.+.+. ..+.|+++. |-.|..... ..+|+.++..++--.
T Consensus 141 --GADaV~~l~~i~~Gs~~e-~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~-------~~dp~~Va~aaRiAa 210 (307)
T 3fok_A 141 --GVDFAKTLVRINLSDAGT-APTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVN-------DLSTDAVIQSVAIAA 210 (307)
T ss_dssp --TCCEEEEEEEECTTCTTH-HHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEE-------CCSHHHHHHHHHHHH
T ss_pred --CCCEEEEEEEECCCChhH-HHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCC-------CCCHHHHHHHHHHHH
Confidence 456656 33334433 4555544332 126887774 431211111 124555555555555
Q ss_pred HcCCc
Q psy15811 548 EEGVN 552 (581)
Q Consensus 548 ~~G~~ 552 (581)
++|+.
T Consensus 211 ELGAD 215 (307)
T 3fok_A 211 GLGND 215 (307)
T ss_dssp TCSSC
T ss_pred HhCCC
Confidence 66655
No 275
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=50.08 E-value=1.2e+02 Score=31.74 Aligned_cols=107 Identities=15% Similarity=0.128 Sum_probs=70.6
Q ss_pred HHHHHHHHHCCCcEEEEEccC---------------CHHHHHHHHHHHHhc---CCCcEEEEEEEcCCC-----------
Q psy15811 155 RPNVEALVRAGVDYLALETIP---------------AEKEALALVKLLREF---PGQKAWLSFSCKDDT----------- 205 (581)
Q Consensus 155 ~~q~~~l~~~gvD~l~~ET~~---------------~~~E~~aa~~a~~~~---~~~pv~isft~~~~g----------- 205 (581)
.+.++.|.++||-.+-+|-.. +.+|+..=++++++. .+.+++|---.+...
T Consensus 170 ~~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~~d~~IiARTDa~aa~l~~s~~d~r 249 (435)
T 3lg3_A 170 FELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLGVPTLLIARTDADAADLLTSDCDPY 249 (435)
T ss_dssp HHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCCGG
T ss_pred HHHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCCccccccccccccc
Confidence 466888999999999999543 466665555555421 256666665565321
Q ss_pred --cCCCC-----------CCHHHHHHHHHhhCCCCceEEEeCC-C-ChhhHHHHHHHHHhhCCCCceEEecCC
Q psy15811 206 --HTSHG-----------ELISSAVTSCLLANPDQIQAIGVNC-V-RPSHVSTLVRCIKQSHPTVQTIVYPNK 263 (581)
Q Consensus 206 --~l~~G-----------~~~~~~~~~~~~~~~~~~~~vGvNC-~-~p~~~~~~l~~l~~~~~~~p~~~~pna 263 (581)
....| ..+++++.++..... |+|+|-+-. . .++++..+.+.+... ....+.+|++.
T Consensus 250 D~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~if~E~~~~~~~ei~~f~~~v~~~-~P~~~La~~~s 320 (435)
T 3lg3_A 250 DREFITGDRTAEGFFRTRAGIEQAISRGLAYAP-YADLVWCETSTPDLALAKRFADAVHAQ-FPGKLLAYNCS 320 (435)
T ss_dssp GGGGEEEEECTTCCEEECCSHHHHHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHHH-STTCEEEEECC
T ss_pred cchhhcccccccccccccCCHHHHHHHHHHHHc-cCCEEEecCCCCCHHHHHHHHHHhccc-cCCeEEEeCCC
Confidence 12223 668999988765445 999999955 3 688899999988753 22445566443
No 276
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=50.03 E-value=2.1e+02 Score=30.18 Aligned_cols=140 Identities=9% Similarity=-0.034 Sum_probs=76.6
Q ss_pred HHHHHHhCCCCEEEec-ccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECC
Q psy15811 413 NVEALVRAGVDYLALE-TIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 491 (581)
Q Consensus 413 ~~~~l~~~gvD~i~~E-T~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC 491 (581)
|+......|+|.|++= ++=+..+++..++.+++ .++.+++-+. +.+++-+++ ..+++.||||.
T Consensus 122 Qi~ea~~~GAD~ILLi~a~l~~~~l~~l~~~a~~-lgm~~LvEvh-----------~~eE~~~A~----~lga~iIGinn 185 (452)
T 1pii_A 122 QIYLARYYQADACLLMLSVLDDDQYRQLAAVAHS-LEMGVLTEVS-----------NEEEQERAI----ALGAKVVGINN 185 (452)
T ss_dssp HHHHHHHTTCSEEEEETTTCCHHHHHHHHHHHHH-TTCEEEEEEC-----------SHHHHHHHH----HTTCSEEEEES
T ss_pred HHHHHHHcCCCEEEEEcccCCHHHHHHHHHHHHH-cCCeEEEEeC-----------CHHHHHHHH----HCCCCEEEEeC
Confidence 5556778999997554 55556788888888888 4888887662 344554444 23668899998
Q ss_pred CCC---ccchHHHHHHHhh-CCCCeEEEeeCCCCCcccc-----ccc-ccCCc--CHHHHHHHHHHHHHcCCcEEeecCC
Q psy15811 492 VRP---SHVSTLVRCIKQS-HPTVQTIVYPNKGGVWDSV-----HMK-WLDTE--DEYSILHYVPQWLEEGVNIIGGCCE 559 (581)
Q Consensus 492 ~~p---~~~~~~l~~l~~~-~~~~pl~~ypNag~~~~~~-----~~~-~~~~~--~~~~~~~~~~~w~~~G~~iiGGCCG 559 (581)
.+. +.=.....+|... ..+++++.-.....+.+.. -++ +.+.. -+....+..++++..-++| |+=
T Consensus 186 r~L~t~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~a~avLVGealmr~~d~~~~~~~l~~~~~KI---CGi 262 (452)
T 1pii_A 186 RDLRDLSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHFANGFLIGSALMAHDDLHAAVRRVLLGENKV---CGL 262 (452)
T ss_dssp EETTTTEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTTCSEEEECHHHHTCSCHHHHHHHHHHCSCEE---CCC
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHhCCEEEEcHHHcCCcCHHHHHHHHHHHhccc---cCC
Confidence 432 1112233333222 2245665544333221110 011 11110 1123455556666544665 445
Q ss_pred CchHHHHHHHHH
Q psy15811 560 VTSYEIQQMRIM 571 (581)
Q Consensus 560 t~P~hI~al~~~ 571 (581)
|+|+++++..++
T Consensus 263 t~~eda~~a~~~ 274 (452)
T 1pii_A 263 TRGQDAKAAYDA 274 (452)
T ss_dssp CSHHHHHHHHHH
T ss_pred CcHHHHHHHHhc
Confidence 888888777654
No 277
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=49.97 E-value=21 Score=35.27 Aligned_cols=42 Identities=19% Similarity=0.160 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEE
Q psy15811 406 LIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAW 452 (581)
Q Consensus 406 ~~~~~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~ 452 (581)
..+.-.++++++.++|+|.|++|-+|+. +++.+.+. .++|++
T Consensus 171 ~a~~~i~rA~a~~eAGA~~ivlE~vp~~-~a~~It~~----l~iP~i 212 (275)
T 3vav_A 171 GAAQLLRDARAVEEAGAQLIVLEAVPTL-VAAEVTRE----LSIPTI 212 (275)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESCCHH-HHHHHHHH----CSSCEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEecCCCHH-HHHHHHHh----CCCCEE
Confidence 3466678889999999999999999985 66655444 368865
No 278
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=49.93 E-value=2.1e+02 Score=28.59 Aligned_cols=227 Identities=12% Similarity=0.112 Sum_probs=139.2
Q ss_pred HHHHHHHHHHHHhccccccccccccccccHhhcCCCHHHHHHHHHHHHHHHHHHhhhhcCCCcccccccccccCCCeEEE
Q psy15811 42 EACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETA 121 (581)
Q Consensus 42 e~v~~iH~~yl~AGAdiI~TnTf~a~~~~l~~~g~~~~~~~~i~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~~~~~Va 121 (581)
+.+.+.-++-++.|-.-|.- |+. +..=...|-....-.-+..+|++..|+..- +.+|.
T Consensus 58 d~l~~~~~~~~~lGi~~v~L--Fgv-p~~Kd~~gs~A~~~~g~v~rair~iK~~~p-------------------dl~vi 115 (323)
T 1l6s_A 58 KHLAREIERIANAGIRSVMT--FGI-SHHTDETGSDAWREDGLVARMSRICKQTVP-------------------EMIVM 115 (323)
T ss_dssp GGHHHHHHHHHHHTCCEEEE--EEE-CSSCBSSCGGGGSTTSHHHHHHHHHHHHCT-------------------TSEEE
T ss_pred HHHHHHHHHHHHCCCCEEEE--eCC-CCCCCccccccCCCCCcHHHHHHHHHHHCC-------------------CeEEE
Confidence 34555567788899875443 333 211011221111112378888888877643 34454
Q ss_pred ee--cCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhc--CCCcEEE
Q psy15811 122 AS--IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF--PGQKAWL 197 (581)
Q Consensus 122 gs--iGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~--~~~pv~i 197 (581)
.+ +-||...-+.|-- . .+.+..++-.+.+.+|+-..+++|+|++.==-|-|- .+.++.+++.+. .+.|++
T Consensus 116 tDvcLc~YT~HGHcGil-~---~g~V~ND~Tl~~Lak~Als~A~AGAdiVAPSdMMDG-rV~aIR~aLd~~G~~~v~Im- 189 (323)
T 1l6s_A 116 SDTCFCEYTSHGHCGVL-C---EHGVDNDATLENLGKQAVVAAAAGADFIAPSAAMDG-QVQAIRQALDAAGFKDTAIM- 189 (323)
T ss_dssp EEECSTTTBSSCCSSCB-C---SSSBCHHHHHHHHHHHHHHHHHHTCSEEEECSCCTT-HHHHHHHHHHHTTCTTCEEB-
T ss_pred EeeeccccCCCCceEec-c---CCcCccHHHHHHHHHHHHHHHHcCCCeEeccccccc-HHHHHHHHHHhCCCCCceee-
Confidence 44 6677665554421 1 135889999999999999999999999987777776 567777777753 345543
Q ss_pred EEEEc--C------------------CCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCCChhhHHHHHHHHHhhCCCCce
Q psy15811 198 SFSCK--D------------------DTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQT 257 (581)
Q Consensus 198 sft~~--~------------------~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~~p~~~~~~l~~l~~~~~~~p~ 257 (581)
|.+.+ + ..+-++-..-.+++..+......|+|.|.|-=+.|. +.+++.++.. .++|+
T Consensus 190 sYsaKyASafYGPFRdAa~Sap~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPal~Y--LDIi~~vk~~-~~~P~ 266 (323)
T 1l6s_A 190 SYSTKFASSFYGPFREAAGSALKGDRKSYQMNPMNRREAIRESLLDEAQGADCLMVKPAGAY--LDIVRELRER-TELPI 266 (323)
T ss_dssp CCCEEBCCSCCHHHHHHHTCCCSSCCTTTSBCTTCHHHHHHHHHHHHHTTCSBEEEESCTTC--HHHHHHHHTT-CSSCE
T ss_pred ehhHHHhHHhhHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCceEEEecCcch--hHHHHHHHHh-cCCCe
Confidence 43332 0 112234445667776654444578999999877663 5778888876 78999
Q ss_pred EEecCCCccccCCCchhhhccccCcccCCCCcccccccCCChHHHHHHHHHHHHH---HHhhc
Q psy15811 258 IVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRG---HIETA 317 (581)
Q Consensus 258 ~~~pnag~~~~dG~~gt~L~~~~g~~~~g~~lws~~~~~~~Pe~v~~vh~~yl~a---iI~Tn 317 (581)
.+|--+| .++ .++.. .. .+ | ++....+.+.+..|-+| +|.|.
T Consensus 267 aaYqVSG------EYA-MikaA--a~--~G--w-----iD~~~~vlEsl~~~kRAGAd~IiTY 311 (323)
T 1l6s_A 267 GAYQVSG------EYA-MIKFA--AL--AG--A-----IDEEKVVLESLGSIKRAGADLIFSY 311 (323)
T ss_dssp EEEECHH------HHH-HHHHH--HH--TT--S-----SCHHHHHHHHHHHHHHTTCSEEEET
T ss_pred EEEEcCc------HHH-HHHHH--HH--cC--C-----ccHHHHHHHHHHHHHhcCCCEEeeh
Confidence 9995555 110 01000 00 11 3 45666788888999998 66665
No 279
>1xk7_A Crotonobetainyl-COA:carnitine COA-transferase; CAIB, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1xk6_A 1xvt_A* 1xvu_A* 1xvv_A* 1xa3_A* 1xa4_A*
Probab=49.82 E-value=21 Score=37.35 Aligned_cols=59 Identities=10% Similarity=0.090 Sum_probs=43.1
Q ss_pred cccCCChHHHHHHHHHHHHhccccccccccccccccHhhcCCCHHHHHHHHHHHHHHHHHHhhhhcCCCccccccccccc
Q psy15811 35 VYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLL 114 (581)
Q Consensus 35 ~~~l~~Pe~v~~iH~~yl~AGAdiI~TnTf~a~~~~l~~~g~~~~~~~~i~~~av~lA~~a~~~~~~~~~~~~~~~~~~~ 114 (581)
.++|.+|+-.+.+++ |-+.|||+.+| |+ +..+.++|++.+.+++ . .
T Consensus 73 ~LDLk~~~Gr~~l~~--Lv~~ADV~ven-fr--PG~~~rlGL~ye~L~~--------------~------------n--- 118 (408)
T 1xk7_A 73 SLNIFKDEGREAFLK--LMETTDIFIEA-SK--GPAFARRGITDEVLWQ--------------H------------N--- 118 (408)
T ss_dssp EECTTSHHHHHHHHH--HHTTCSEEEEE-CS--SSHHHHTTCCHHHHHH--------------H------------C---
T ss_pred EecCCCHHHHHHHHH--HHhhCCEEEEC-CC--ccHHHHcCCCHHHHHH--------------h------------C---
Confidence 466889987766655 45679999999 65 5678899998655432 1 1
Q ss_pred CCCeEEEeecCCcCC
Q psy15811 115 TGHIETAASIGPYGT 129 (581)
Q Consensus 115 ~~~~~VagsiGP~g~ 129 (581)
+.+|..||..||.
T Consensus 119 --P~LIy~sisGfG~ 131 (408)
T 1xk7_A 119 --PKLVIAHLSGFGQ 131 (408)
T ss_dssp --TTCEEEEEESSCS
T ss_pred --CCeEEEEeeecCC
Confidence 6678889988886
No 280
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=49.13 E-value=1.9e+02 Score=28.30 Aligned_cols=117 Identities=14% Similarity=0.215 Sum_probs=64.0
Q ss_pred CeEEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEEE---ccC------CHHHHHHHHHHH
Q psy15811 117 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE---TIP------AEKEALALVKLL 187 (581)
Q Consensus 117 ~~~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~E---T~~------~~~E~~aa~~a~ 187 (581)
+..|.|=|=-+.+++++|+.| .+.+++. ++++.+++.|+|+|=+= |-| ..+|+..++.++
T Consensus 5 ~~~imgilN~TpDSFsdgg~~-------~~~~~a~----~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi 73 (280)
T 1eye_A 5 PVQVMGVLNVTDDSFSDGGCY-------LDLDDAV----KHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVV 73 (280)
T ss_dssp CCEEEEEEECSCCTTCSSCCC-------CSHHHHH----HHHHHHHHTTCSEEEEECC--------------HHHHHHHH
T ss_pred CcEEEEEEeCCCCCcCCCccc-------CCHHHHH----HHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHH
Confidence 567888888888888776432 4555554 46677788999997333 223 356666655555
Q ss_pred HhcC--CCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEE-EeCCC-ChhhHHHHHHHHHhhCCCCceEEecCC
Q psy15811 188 REFP--GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI-GVNCV-RPSHVSTLVRCIKQSHPTVQTIVYPNK 263 (581)
Q Consensus 188 ~~~~--~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~v-GvNC~-~p~~~~~~l~~l~~~~~~~p~~~~pna 263 (581)
+... ++|+- +++ ... ++++++.+ .|++.| -+|-. .-+.|.++++ + .+.|++++++.
T Consensus 74 ~~l~~~~~piS----IDT-------~~~-~va~aAl~---aGa~iINdvsg~~~d~~m~~~~a---~--~~~~vVlmh~~ 133 (280)
T 1eye_A 74 KELAAQGITVS----IDT-------MRA-DVARAALQ---NGAQMVNDVSGGRADPAMGPLLA---E--ADVPWVLMHWR 133 (280)
T ss_dssp HHHHHTTCCEE----EEC-------SCH-HHHHHHHH---TTCCEEEETTTTSSCTTHHHHHH---H--HTCCEEEECCC
T ss_pred HHhhcCCCEEE----EeC-------CCH-HHHHHHHH---cCCCEEEECCCCCCCHHHHHHHH---H--hCCeEEEEcCC
Confidence 5321 66643 331 222 34444444 354433 44443 2234555544 3 36789999886
Q ss_pred C
Q psy15811 264 G 264 (581)
Q Consensus 264 g 264 (581)
|
T Consensus 134 G 134 (280)
T 1eye_A 134 A 134 (280)
T ss_dssp C
T ss_pred C
Confidence 6
No 281
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=49.04 E-value=1.3e+02 Score=29.49 Aligned_cols=119 Identities=14% Similarity=0.193 Sum_probs=62.0
Q ss_pred CeEEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEE---------EccCCHHHHHHHHHHH
Q psy15811 117 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL---------ETIPAEKEALALVKLL 187 (581)
Q Consensus 117 ~~~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~---------ET~~~~~E~~aa~~a~ 187 (581)
+..|.|=|==+.+++++|+.| .+.++ -.++++.+++.|+|+|=+ +.++.-+|..-++-++
T Consensus 6 r~~iMGIlNvTPDSFsDGG~~-------~~~~~----a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi 74 (270)
T 4hb7_A 6 KTKIMGILNVTPDSFSDGGKF-------NNVET----AINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVV 74 (270)
T ss_dssp CCEEEEEEECC-----------------CHHHH----HHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCCCCCCCC-------CCHHH----HHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHH
Confidence 557888888888888776433 23333 345778889999999844 5567777777766666
Q ss_pred HhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEE-eCCC-ChhhHHHHHHHHHhhCCCCceEEecCCC
Q psy15811 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIG-VNCV-RPSHVSTLVRCIKQSHPTVQTIVYPNKG 264 (581)
Q Consensus 188 ~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vG-vNC~-~p~~~~~~l~~l~~~~~~~p~~~~pnag 264 (581)
+......+.+|. ++ ... ++++++.+ .|++.|- |... .-..|.+++. + .+.|++++-+.|
T Consensus 75 ~~l~~~~v~iSI--DT-------~~~-~Va~~al~---aGa~iINDVs~g~~d~~m~~~va---~--~~~~~vlMH~~~ 135 (270)
T 4hb7_A 75 EAIVGFDVKISV--DT-------FRS-EVAEACLK---LGVDMINDQWAGLYDHRMFQIVA---K--YDAEIILMHNGN 135 (270)
T ss_dssp HHHTTSSSEEEE--EC-------SCH-HHHHHHHH---HTCCEEEETTTTSSCTHHHHHHH---H--TTCEEEEECCCS
T ss_pred HHhhcCCCeEEE--EC-------CCH-HHHHHHHH---hccceeccccccccchhHHHHHH---H--cCCCeEEecccc
Confidence 644333455544 32 112 33344433 4666543 3333 2234545443 3 467888875544
No 282
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=48.92 E-value=2.2e+02 Score=28.50 Aligned_cols=167 Identities=11% Similarity=0.065 Sum_probs=90.7
Q ss_pred CceEEeccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec---ccCC----------HHH---H
Q psy15811 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE---TIPA----------EKE---A 436 (581)
Q Consensus 373 ~v~VagsiGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l~~~gvD~i~~E---T~p~----------~~E---a 436 (581)
+.+|.|=+-++++.+.+ .| .+.+.+ .++++.+.+.|+|+|=+- |-|. ..| .
T Consensus 27 ~~~vMGIlNvTpDSFsd--~~-------~~~~~a----l~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv 93 (314)
T 3tr9_A 27 EPAVMGIINVSPNSFYH--PH-------LDLNSA----LRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRL 93 (314)
T ss_dssp SCEEEEEEECSTTCSBC--BC-------CSHHHH----HHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHH
T ss_pred CcEEEEEEeCCCCchhh--cc-------CCHHHH----HHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHH
Confidence 35788988898887765 22 344444 356777778999998553 5553 234 3
Q ss_pred HHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECCCCCccchHHHHHHHhhCCCCeEEEe
Q psy15811 437 LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVY 516 (581)
Q Consensus 437 ~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~y 516 (581)
..+++++++..++| +|+-- ... +++++..+. ++. -||-++-.....+++.++.. +.|+++.
T Consensus 94 ~pvI~~l~~~~~vp--ISIDT---------~~~-~Va~aAl~a---Ga~--iINDVsg~~~~~m~~v~a~~--g~~vVlM 154 (314)
T 3tr9_A 94 LPVIDAIKKRFPQL--ISVDT---------SRP-RVMREAVNT---GAD--MINDQRALQLDDALTTVSAL--KTPVCLM 154 (314)
T ss_dssp HHHHHHHHHHCCSE--EEEEC---------SCH-HHHHHHHHH---TCC--EEEETTTTCSTTHHHHHHHH--TCCEEEE
T ss_pred HHHHHHHHhhCCCe--EEEeC---------CCH-HHHHHHHHc---CCC--EEEECCCCCchHHHHHHHHh--CCeEEEE
Confidence 44556666544544 56521 112 233333222 334 46664333344555556665 4899999
Q ss_pred eCCCCCcccccccccCC--cC-HHHHHHHHHHHHHcCC---cEE---eec---CCCchHHHHHHHHHH
Q psy15811 517 PNKGGVWDSVHMKWLDT--ED-EYSILHYVPQWLEEGV---NII---GGC---CEVTSYEIQQMRIMI 572 (581)
Q Consensus 517 pNag~~~~~~~~~~~~~--~~-~~~~~~~~~~w~~~G~---~ii---GGC---CGt~P~hI~al~~~l 572 (581)
++.|.+.+..... .|+ .+ ...+.+.+....+.|+ +|| |=- -|-+++|=-++-+.+
T Consensus 155 h~~G~P~tmq~~~-~ydvv~ev~~~l~~~i~~a~~~GI~~~~IilDPG~G~~~F~Kt~~~n~~lL~~l 221 (314)
T 3tr9_A 155 HFPSETRKPGSTT-HFYFLQSVKKELQESIQRCKKAGISEDRIIIDPGFGQGNYGKNVSENFYLLNKL 221 (314)
T ss_dssp CCCCTTCCTTSSC-HHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCCSGGGCCCHHHHHHHHHTT
T ss_pred CCCCCCccccccc-ccchHHHHHHHHHHHHHHHHHcCCCHhHEEEeCCCCchhhcCCHHHHHHHHHHH
Confidence 9988654332110 010 00 1245566667778898 465 322 356677544443343
No 283
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=48.86 E-value=1.9e+02 Score=27.89 Aligned_cols=101 Identities=15% Similarity=0.132 Sum_probs=59.2
Q ss_pred HHHHHhCCCCEEEecccCCHHHHHHHHHHHHhc-CCCeEEEEEEEcCCC---c---CCCCCcHHHHHHHHHhh-CCCCce
Q psy15811 414 VEALVRAGVDYLALETIPAEKEALALVKLLREF-PGQKAWLSFSCKDDT---H---TSHGELISSAVTSCLLA-NPDQIQ 485 (581)
Q Consensus 414 ~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~-~~~pv~iSft~~~~~---~---l~~G~~~~~~~~~l~~~-~~~~~~ 485 (581)
++.+.+.|+|++.+=...-..-++++++.+++. .+.|-++-+++-... . +..+.++.+.+..+... ...+++
T Consensus 98 ~~~~~~~gaD~vTVh~~~G~~~~~~a~~~~~~~g~~~~~li~VtvLTS~s~~~l~~~g~~~~~~~~V~~~A~~a~~aG~~ 177 (255)
T 3ldv_A 98 VKAAAELGVWMVNVHASGGERMMAASREILEPYGKERPLLIGVTVLTSMESADLQGIGILSAPQDHVLRLATLTKNAGLD 177 (255)
T ss_dssp HHHHHHTTCSEEEEEGGGCHHHHHHHHHHHGGGGGGSCEEEEECSCTTCCHHHHHHTTCCSCHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHhcCCCEEEEeccCCHHHHHHHHHHHhhcCCCCceEEEEEEEecCCHHHHHhcCCCCCHHHHHHHHHHHHHHcCCC
Confidence 345678899999998887777778888888753 235666666553221 1 12245666666554221 234555
Q ss_pred EEEECCCCCccchHHHHHHHhhCCCCeEEEeeCCCC
Q psy15811 486 AIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGG 521 (581)
Q Consensus 486 ~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~ypNag~ 521 (581)
|+=|. |.. ++.++....+..+.+-|-.+.
T Consensus 178 --GvV~s-a~e----~~~iR~~~g~~fl~VtPGIr~ 206 (255)
T 3ldv_A 178 --GVVCS-AQE----ASLLKQHLGREFKLVTPGIRP 206 (255)
T ss_dssp --EEECC-HHH----HHHHHHHHCTTSEEEEECCCC
T ss_pred --EEEEC-HHH----HHHHHHhcCCCcEEEeCCccc
Confidence 77784 332 334444322345677787764
No 284
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=48.45 E-value=73 Score=30.12 Aligned_cols=98 Identities=13% Similarity=0.110 Sum_probs=51.8
Q ss_pred HHHHHHHhCCCCEEEeccc--CCHHHHHHHHHHHHhcCCCeEEEEEEEcCC-C----cC-----CCCCcHHHHHHHHHhh
Q psy15811 412 PNVEALVRAGVDYLALETI--PAEKEALALVKLLREFPGQKAWLSFSCKDD-T----HT-----SHGELISSAVTSCLLA 479 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~--p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~-~----~l-----~~G~~~~~~~~~l~~~ 479 (581)
++++.+++.|+|.+.+-+. .+......+.+... .-.+.+++.++.. + .+ .++++..+.++.+.+.
T Consensus 88 ~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~~---~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~ 164 (252)
T 1ka9_F 88 EDARKLLLSGADKVSVNSAAVRRPELIRELADHFG---AQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVEL 164 (252)
T ss_dssp HHHHHHHHHTCSEEEECHHHHHCTHHHHHHHHHHC---GGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEChHHHhCcHHHHHHHHHcC---CCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHc
Confidence 5677777789999998663 33333333333332 1234555555421 1 11 1224555665655333
Q ss_pred CCCCceEEEECCCCCcc-----chHHHHHHHhhCCCCeEEEe
Q psy15811 480 NPDQIQAIGVNCVRPSH-----VSTLVRCIKQSHPTVQTIVY 516 (581)
Q Consensus 480 ~~~~~~~iGiNC~~p~~-----~~~~l~~l~~~~~~~pl~~y 516 (581)
++..|.++....+. -...+++++... ++|+++-
T Consensus 165 ---G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~~-~ipvia~ 202 (252)
T 1ka9_F 165 ---GAGEILLTSMDRDGTKEGYDLRLTRMVAEAV-GVPVIAS 202 (252)
T ss_dssp ---TCCEEEEEETTTTTTCSCCCHHHHHHHHHHC-SSCEEEE
T ss_pred ---CCCEEEEecccCCCCcCCCCHHHHHHHHHHc-CCCEEEe
Confidence 45566665432211 256778888765 6887654
No 285
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=48.38 E-value=1.2e+02 Score=30.37 Aligned_cols=222 Identities=10% Similarity=0.057 Sum_probs=113.4
Q ss_pred CCCCHHHHHHHHHhhCCCCceEEEeCCCChhhHHHHHHHHHhhCCCCceEEecCCC-ccccCCCchh---hhccccCccc
Q psy15811 209 HGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG-VKLLDGSFTS---QVSRHTIKDV 284 (581)
Q Consensus 209 ~G~~~~~~~~~~~~~~~~~~~~vGvNC~~p~~~~~~l~~l~~~~~~~p~~~~pnag-~~~~dG~~gt---~L~~~~g~~~ 284 (581)
.|....+.+..+.+ .+-..--+||...+.+..+|+.... .+.|++++-..| .....+.+.. .+.+.++.++
T Consensus 11 ~~n~~~~ll~~A~~---~~yAV~AfNv~n~e~~~Avl~AAee--~~sPvIlq~s~g~~~y~g~~~~~~~~~~A~~~~VPV 85 (306)
T 3pm6_A 11 KSNRALPLLTFART---HSFAIPAICVYNLEGILAIIRAAEH--KRSPAMILLFPWAIQYADSLLVRTAASACRAASVPI 85 (306)
T ss_dssp TTCSSHHHHHHHHH---TTCCEEEEECSSHHHHHHHHHHHHH--TTCCEEEEECHHHHHHHTTHHHHHHHHHHHHCSSCE
T ss_pred CccHHHHHHHHHHH---CCcEEEEEeeCCHHHHHHHHHHHHH--hCCCEEEEcChhHHhhccHHHHHHHHHHHHHCCCCE
Confidence 56666777777664 4444556899999999999998887 578999887655 3333333222 2222223321
Q ss_pred C---CCCcccccccCCChHHHHHHHHHHHHHHHhhcCCcccccccccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHH
Q psy15811 285 D---GHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG 361 (581)
Q Consensus 285 ~---g~~lws~~~~~~~Pe~v~~vh~~yl~aiI~Tna~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~av~lA~~A~ 361 (581)
- .+ ..+++.+.+.-+.|.+. .-.+.|.+...|+|. ++-++..++.+..|++|+..
T Consensus 86 aLHlDH--------g~~~e~i~~ai~~~~~~-----~~~~GFtSVMiDgS~--------~p~eENi~~Tk~vv~~ah~~- 143 (306)
T 3pm6_A 86 TLHLDH--------AQDPEIIKRAADLSRSE-----THEPGFDSIMVDMSH--------FSKEENLRLTRELVAYCNAR- 143 (306)
T ss_dssp EEEEEE--------ECCHHHHHHHHHTC-----------CCCSEEEECCTT--------SCHHHHHHHHHHHHHHHHTT-
T ss_pred EEEcCC--------CCCHHHHHHHHHhhhhc-----cCCCCCCEEEEeCCC--------CCHHHHHHHHHHHHHHHHHc-
Confidence 0 01 13556655442222111 112345566666664 33444445555555555432
Q ss_pred HhhhhhcCCCCCceEEeccCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHhCCCCEEEec--cc--------
Q psy15811 362 VDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYV-DSMTEADLIAWHRPNVEALVRAGVDYLALE--TI-------- 430 (581)
Q Consensus 362 ~~~~~~~~~~~~v~VagsiGP~g~~~~~g~eY~g~y~-~~~~~~~~~~~~~~~~~~l~~~gvD~i~~E--T~-------- 430 (581)
.+.|=+-+|-.|.. .+|..-.++.. .-+++++..+|. +.|||.|.+- |.
T Consensus 144 -----------gvsVEaElG~igG~-Edgv~~~~~~~~~yT~Peea~~Fv--------~TgvD~LAvaiGt~HG~Yk~~~ 203 (306)
T 3pm6_A 144 -----------GIATEAEPGRIEGG-EDGVQDTVDLEGVLTTPEESEEFV--------ATGINWLAPAFGNVHGNYGPRG 203 (306)
T ss_dssp -----------TCEEEECSSBCCCC-BTTBCCCTTCCCBCCCHHHHHHHH--------TTTCSEECCCSSCCSSCCCTTC
T ss_pred -----------CCeEEEEeeeeccc-cCCccccccccccCCCHHHHHHHH--------HcCCCEEEEEcCccccCcCCCC
Confidence 36676666666421 22221111100 124677776655 3799988653 32
Q ss_pred CC--HHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECC
Q psy15811 431 PA--EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 491 (581)
Q Consensus 431 p~--~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC 491 (581)
|. ..-++.+-+.+. .++|.++|= .+|.+-++.-+.+ ..++.=|.|+.
T Consensus 204 p~Ld~~~L~~I~~~v~--~~vpLVlHG--------gSG~p~e~i~~ai----~~GV~KiNi~T 252 (306)
T 3pm6_A 204 VQLDYERLQRINEAVG--ERVGLVLHG--------ADPFTKEIFEKCI----ERGVAKVNVNR 252 (306)
T ss_dssp CCCCHHHHHHHHHHHT--TTSEEEECS--------CTTCCHHHHHHHH----HTTEEEEEESH
T ss_pred CccCHHHHHHHHHHhC--CCCCEEeeC--------CCCCCHHHHHHHH----HcCCeEEEeCh
Confidence 22 222222322222 257766543 3577777766665 23555444444
No 286
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=48.10 E-value=16 Score=36.12 Aligned_cols=48 Identities=15% Similarity=0.169 Sum_probs=38.3
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCcEEEEEccCCHHHHHH-HHHHHHhcCCCcEE
Q psy15811 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALA-LVKLLREFPGQKAW 196 (581)
Q Consensus 145 ~~~~~~~~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~a-a~~a~~~~~~~pv~ 196 (581)
-+.+++.++-.+.++.|.+.|+|++++=+.+ +.+ +++.+++..++||+
T Consensus 66 ks~e~i~~~~~~~~~~L~~~g~d~IVIACNT----a~~~al~~lr~~~~iPvi 114 (274)
T 3uhf_A 66 KDKDTIIKFCLEALDFFEQFQIDMLIIACNT----ASAYALDALRAKAHFPVY 114 (274)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCCSEEEECCHH----HHHHSHHHHHHHCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCC----hhHHHHHHHHHhcCCCEE
Confidence 6889999999999999999999999987643 333 35677765578987
No 287
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=47.79 E-value=2e+02 Score=28.01 Aligned_cols=66 Identities=15% Similarity=0.023 Sum_probs=46.3
Q ss_pred HHHHHHHhCCCCEEEecc-cCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEEC
Q psy15811 412 PNVEALVRAGVDYLALET-IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET-~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiN 490 (581)
.|+......|+|.|++=+ .=+..+++..++..++ .++.+++.+. +.+++-+++ ..+++.||+|
T Consensus 133 ~qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~-lGl~~lvevh-----------~~eEl~~A~----~~ga~iIGin 196 (272)
T 3tsm_A 133 YQVYEARSWGADCILIIMASVDDDLAKELEDTAFA-LGMDALIEVH-----------DEAEMERAL----KLSSRLLGVN 196 (272)
T ss_dssp HHHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHH-TTCEEEEEEC-----------SHHHHHHHT----TSCCSEEEEE
T ss_pred HHHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHH-cCCeEEEEeC-----------CHHHHHHHH----hcCCCEEEEC
Confidence 367777789999976653 3345678888888888 4888887662 455554443 4577899999
Q ss_pred CCC
Q psy15811 491 CVR 493 (581)
Q Consensus 491 C~~ 493 (581)
...
T Consensus 197 nr~ 199 (272)
T 3tsm_A 197 NRN 199 (272)
T ss_dssp CBC
T ss_pred CCC
Confidence 843
No 288
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=47.48 E-value=45 Score=33.79 Aligned_cols=99 Identities=11% Similarity=0.031 Sum_probs=63.5
Q ss_pred HHHHHHhCCCCEEEecccC-CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECC
Q psy15811 413 NVEALVRAGVDYLALETIP-AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 491 (581)
Q Consensus 413 ~~~~l~~~gvD~i~~ET~p-~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC 491 (581)
-++...++|+|.+.+=+-. ...+++.+++.+++ .++.+..+++.- ..++++.+++.+......++..|.+.-
T Consensus 98 ~i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~-~G~~v~~~~~~a------~~~~~e~~~~ia~~~~~~Ga~~i~l~D 170 (345)
T 1nvm_A 98 DLKNAYQAGARVVRVATHCTEADVSKQHIEYARN-LGMDTVGFLMMS------HMIPAEKLAEQGKLMESYGATCIYMAD 170 (345)
T ss_dssp HHHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHH-HTCEEEEEEEST------TSSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHH-CCCEEEEEEEeC------CCCCHHHHHHHHHHHHHCCCCEEEECC
Confidence 3555566799998765433 24677788888887 488877776432 233444343333222334566666654
Q ss_pred ----CCCccchHHHHHHHhhCC-CCeEEEeeC
Q psy15811 492 ----VRPSHVSTLVRCIKQSHP-TVQTIVYPN 518 (581)
Q Consensus 492 ----~~p~~~~~~l~~l~~~~~-~~pl~~ypN 518 (581)
..|..+..+++.++...+ ++|+.+...
T Consensus 171 T~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~H 202 (345)
T 1nvm_A 171 SGGAMSMNDIRDRMRAFKAVLKPETQVGMHAH 202 (345)
T ss_dssp TTCCCCHHHHHHHHHHHHHHSCTTSEEEEECB
T ss_pred CcCccCHHHHHHHHHHHHHhcCCCceEEEEEC
Confidence 258889999999988763 589988763
No 289
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=47.33 E-value=1.2e+02 Score=30.92 Aligned_cols=87 Identities=10% Similarity=0.147 Sum_probs=61.1
Q ss_pred HHHHHHH-CCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCC
Q psy15811 157 NVEALVR-AGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 235 (581)
Q Consensus 157 q~~~l~~-~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC 235 (581)
.+.++.+ +|+.++ ....+.++....++.+|+...+|+.+.+-+.+ .+.+..+.+ .+++.|=||+
T Consensus 61 lA~avA~~GGlgii--~~~~s~e~~~~~I~~vk~~~~~pvga~ig~~~----------~e~a~~l~e---aGad~I~ld~ 125 (361)
T 3khj_A 61 MAVGMARLGGIGII--HKNMDMESQVNEVLKVKNSGGLRVGAAIGVNE----------IERAKLLVE---AGVDVIVLDS 125 (361)
T ss_dssp HHHHHHHTTCEEEE--CSSSCHHHHHHHHHHHHHTTCCCCEEEECTTC----------HHHHHHHHH---TTCSEEEECC
T ss_pred HHHHHHHcCCCeEE--ecCCCHHHHHHHHHHHHhccCceEEEEeCCCH----------HHHHHHHHH---cCcCeEEEeC
Confidence 3444554 566655 35668888888888888766789888773321 445555554 6899999999
Q ss_pred C--ChhhHHHHHHHHHhhCCCCceEE
Q psy15811 236 V--RPSHVSTLVRCIKQSHPTVQTIV 259 (581)
Q Consensus 236 ~--~p~~~~~~l~~l~~~~~~~p~~~ 259 (581)
+ +|..+.+.++.+++. .+.|+++
T Consensus 126 a~G~~~~~~~~i~~i~~~-~~~~Viv 150 (361)
T 3khj_A 126 AHGHSLNIIRTLKEIKSK-MNIDVIV 150 (361)
T ss_dssp SCCSBHHHHHHHHHHHHH-CCCEEEE
T ss_pred CCCCcHHHHHHHHHHHHh-cCCcEEE
Confidence 7 377788888888875 4777776
No 290
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=47.31 E-value=51 Score=32.22 Aligned_cols=152 Identities=12% Similarity=0.049 Sum_probs=81.6
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhh
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 479 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~ 479 (581)
..+.+++.++..+.++.|.+.|+|+|++-....- ..+++.+|+..++||+ ++ ++.+++.+...
T Consensus 48 ~~s~~~i~~~~~~~~~~L~~~g~d~IViACNTas---~~~l~~lr~~~~iPVi-gi-------------iep~~~~A~~~ 110 (276)
T 2dwu_A 48 PRSVEEVQSFVFEMVEFLKQFPLKALVVACNTAA---AATLAALQEALSIPVI-GV-------------IHPGARAAIKV 110 (276)
T ss_dssp TSCHHHHHHHHHHHHHHHTTSCEEEEEECCHHHH---HHHHHHHHHHCSSCEE-ES-------------HHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCcHH---HHHHHHHHHHCCCCEE-ec-------------cHHHHHHHHHh
Confidence 3678999999999999999999999998865431 1357777766689977 21 33344433211
Q ss_pred CCCCceEEEECCCCCccchHHHH-HHHhhCCCCeEEEeeCCCCCcccccccccC-CcCHHHHHHHHHHHHHcCC-cEEee
Q psy15811 480 NPDQIQAIGVNCVRPSHVSTLVR-CIKQSHPTVQTIVYPNKGGVWDSVHMKWLD-TEDEYSILHYVPQWLEEGV-NIIGG 556 (581)
Q Consensus 480 ~~~~~~~iGiNC~~p~~~~~~l~-~l~~~~~~~pl~~ypNag~~~~~~~~~~~~-~~~~~~~~~~~~~w~~~G~-~iiGG 556 (581)
... .-|||=.+.........+ .++....+..+...+..+.+.... .++.. ......+.++++.+.+.|+ .||=|
T Consensus 111 ~~~--~rIgVlaT~~T~~s~~y~~~i~~~~~~~~v~~~~~~~~v~~ve-~g~~~~~~~~~~l~~~l~~l~~~~~D~IVLG 187 (276)
T 2dwu_A 111 TKK--GKIGVIGTVGTIQSNMYEKALHELDTYLKVHSHACPTLATVVE-NRLEDTAYVTQQVKQALLPLTKEDIDTLILG 187 (276)
T ss_dssp CSS--SEEEEEECHHHHHTTHHHHHHHHHCTTCEEEEEECTTHHHHHH-HSTTCHHHHHHHHHHHHHHHHTSCCSEEEEC
T ss_pred cCC--CeEEEEeChhhhhhHHHHHHHHHhCCCCEEEeeeCHHHHHHHH-cCCcCCHHHHHHHHHHHHHHHhcCCCEEEEC
Confidence 222 245665543322222222 233333244554445433222111 22221 1112356677777777775 34556
Q ss_pred cCCCchHHHHHHHHHH
Q psy15811 557 CCEVTSYEIQQMRIMI 572 (581)
Q Consensus 557 CCGt~P~hI~al~~~l 572 (581)
|-+-.. ....|++.+
T Consensus 188 CTh~p~-l~~~i~~~~ 202 (276)
T 2dwu_A 188 CTHYPL-LESYIKKEL 202 (276)
T ss_dssp STTGGG-GHHHHHHHH
T ss_pred CCCHHH-HHHHHHHHc
Confidence 655443 444455444
No 291
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=46.94 E-value=41 Score=33.85 Aligned_cols=14 Identities=7% Similarity=0.007 Sum_probs=8.0
Q ss_pred hhhHHHHHHHHHhh
Q psy15811 238 PSHVSTLVRCIKQS 251 (581)
Q Consensus 238 p~~~~~~l~~l~~~ 251 (581)
++++.+.++.++..
T Consensus 216 ~e~~~~~l~~l~~l 229 (350)
T 3t7v_A 216 IESTILSLRGMSTN 229 (350)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhC
Confidence 55555666666553
No 292
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=46.86 E-value=90 Score=29.57 Aligned_cols=99 Identities=13% Similarity=0.101 Sum_probs=59.2
Q ss_pred cCCChHHHHHHHHHHHHhccccccccccccccccHhhcCCCHHHHHHHHHHHHHHHHHHhhhhcCCCcccccccccccCC
Q psy15811 37 LTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG 116 (581)
Q Consensus 37 ~l~~Pe~v~~iH~~yl~AGAdiI~TnTf~a~~~~l~~~g~~~~~~~~i~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~~ 116 (581)
+.+-|+.+...-+.|.++|||+|+.+.|... + ..+.+++.+++. ++
T Consensus 73 l~DipnTv~~~~~~~~~~gad~vtvh~~~G~-----------~----~l~~~~~~~~~~--------------g~----- 118 (228)
T 3m47_A 73 VADIPETNEKICRATFKAGADAIIVHGFPGA-----------D----SVRACLNVAEEM--------------GR----- 118 (228)
T ss_dssp ECSCHHHHHHHHHHHHHTTCSEEEEESTTCH-----------H----HHHHHHHHHHHH--------------TC-----
T ss_pred ecccHhHHHHHHHHHHhCCCCEEEEeccCCH-----------H----HHHHHHHHHHhc--------------CC-----
Confidence 4578999999999999999999888766531 1 233444444321 12
Q ss_pred CeEEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHH
Q psy15811 117 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLL 187 (581)
Q Consensus 117 ~~~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~ 187 (581)
.++|.-++.+.+.. + ..+ ..+...++.-.+.|+|.+..-. ...+|++.+.+..
T Consensus 119 ~v~vLt~~s~~~~~-------------~-~~~---~~~~~~a~~a~~~G~~GvV~~a-t~~~e~~~ir~~~ 171 (228)
T 3m47_A 119 EVFLLTEMSHPGAE-------------M-FIQ---GAADEIARMGVDLGVKNYVGPS-TRPERLSRLREII 171 (228)
T ss_dssp EEEEECCCCSGGGG-------------T-THH---HHHHHHHHHHHHTTCCEEECCS-SCHHHHHHHHHHH
T ss_pred CeEEEEeCCCccHH-------------H-HHH---HHHHHHHHHHHHhCCcEEEECC-CChHHHHHHHHhc
Confidence 46665565554320 0 111 3344445555578999987654 3466776555544
No 293
>2yv4_A Hypothetical protein PH0435; alpha and beta proteins (A+B), SUA5 domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=46.82 E-value=34 Score=28.49 Aligned_cols=46 Identities=20% Similarity=0.208 Sum_probs=38.0
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhc
Q psy15811 401 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 446 (581)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~ 446 (581)
-+.++.....+..++.|-+.|+|.|++|.+|..-...++..-+++-
T Consensus 52 ~~~~~~A~~Lf~~LR~~D~~~~~~I~~e~~p~~g~g~Ai~nRL~kA 97 (105)
T 2yv4_A 52 SSVEEVAKNLFKALRYMDKAGVDVVIAEGVEERGLGLAVMNRLRKA 97 (105)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTCSEEEEEEESGGGHHHHHHHHC---
T ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEeCCCCcChHHHHHHHHHHh
Confidence 4788999999999999988999999999999977777888777763
No 294
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium}
Probab=46.78 E-value=1.1e+02 Score=31.15 Aligned_cols=51 Identities=16% Similarity=0.226 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHCC--CcEEEEEc-----cCCHHHHHHHHHHHHhcCCCcEEEE-EEEc
Q psy15811 151 IAWHRPNVEALVRAG--VDYLALET-----IPAEKEALALVKLLREFPGQKAWLS-FSCK 202 (581)
Q Consensus 151 ~~~~~~q~~~l~~~g--vD~l~~ET-----~~~~~E~~aa~~a~~~~~~~pv~is-ft~~ 202 (581)
.+.+.++++.|.+.| +|.|-+.. .++..+++.+++.+.+. ++||+|| +-+.
T Consensus 200 ~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~p~~~~~~~~l~~~a~~-Glpi~iTEldv~ 258 (356)
T 2dep_A 200 RDILYELVKNLLEKGVPIDGVGHQTHIDIYNPPVERIIESIKKFAGL-GLDNIITELDMS 258 (356)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTT-TCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCCccEEEeeeeecCCCCCHHHHHHHHHHHHhC-CCeEEEeeceec
Confidence 356788888888877 59988763 37889999999988765 8999998 5454
No 295
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=46.66 E-value=81 Score=31.84 Aligned_cols=97 Identities=14% Similarity=0.066 Sum_probs=60.0
Q ss_pred HHHHHHCCCcEEEEEccCC---------------HHHHHHHHHHHHhcCCCcEEEEEEEcC---CCcCCCCCCHHHHHHH
Q psy15811 158 VEALVRAGVDYLALETIPA---------------EKEALALVKLLREFPGQKAWLSFSCKD---DTHTSHGELISSAVTS 219 (581)
Q Consensus 158 ~~~l~~~gvD~l~~ET~~~---------------~~E~~aa~~a~~~~~~~pv~isft~~~---~g~l~~G~~~~~~~~~ 219 (581)
++..+++|+|.|-+-.-.+ ++.++.+++.+|+. +..|.+ ++.+ .++ .+++..++.
T Consensus 102 i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~-G~~v~~--~~~~~~~~~~----~~~~~~~~~ 174 (337)
T 3ble_A 102 VDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKS-GLKINV--YLEDWSNGFR----NSPDYVKSL 174 (337)
T ss_dssp HHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHT-TCEEEE--EEETHHHHHH----HCHHHHHHH
T ss_pred HHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC-CCEEEE--EEEECCCCCc----CCHHHHHHH
Confidence 5667788999975543222 25666777777775 666554 4443 222 234433333
Q ss_pred HHhhCCCCceEEEeCCC----ChhhHHHHHHHHHhhCCCCceEEec
Q psy15811 220 CLLANPDQIQAIGVNCV----RPSHVSTLVRCIKQSHPTVQTIVYP 261 (581)
Q Consensus 220 ~~~~~~~~~~~vGvNC~----~p~~~~~~l~~l~~~~~~~p~~~~p 261 (581)
+......|++.|.+-=+ .|..+.++++.+++..+++||.+..
T Consensus 175 ~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~~~i~~H~ 220 (337)
T 3ble_A 175 VEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIHFEFHG 220 (337)
T ss_dssp HHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTTSCEEEEC
T ss_pred HHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 32233678888877543 4999999999999863366766653
No 296
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=46.48 E-value=37 Score=34.71 Aligned_cols=114 Identities=11% Similarity=0.131 Sum_probs=67.6
Q ss_pred CCCCHHH---HHHHHHHHHHHHHHCCCcEEEEEcc----------C-----------CHH----HHHHHHHHHHhc--CC
Q psy15811 143 DSMTEAD---LIAWHRPNVEALVRAGVDYLALETI----------P-----------AEK----EALALVKLLREF--PG 192 (581)
Q Consensus 143 ~~~~~~~---~~~~~~~q~~~l~~~gvD~l~~ET~----------~-----------~~~----E~~aa~~a~~~~--~~ 192 (581)
+++|.+| +.+.|.+-++...++|.|.|=+=-- | +++ =+..+++++++. ++
T Consensus 146 ~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d 225 (363)
T 3l5l_A 146 REMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPEN 225 (363)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTT
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCC
Confidence 4677654 6677888888888899999844311 1 121 245567777754 26
Q ss_pred CcEEEEEEEcCCCcCCCC-CCHHHHHHHHHhhCCCCceEEEeCCC----------ChhhHHHHHHHHHhhCCCCceEE
Q psy15811 193 QKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCV----------RPSHVSTLVRCIKQSHPTVQTIV 259 (581)
Q Consensus 193 ~pv~isft~~~~g~l~~G-~~~~~~~~~~~~~~~~~~~~vGvNC~----------~p~~~~~~l~~l~~~~~~~p~~~ 259 (581)
.||.+-++..+. ...| .++++++..+......|++.|-+-.. +|....++++.+++. .++|++.
T Consensus 226 ~pV~vRis~~~~--~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~-~~iPVi~ 300 (363)
T 3l5l_A 226 LPLTARFGVLEY--DGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRRE-AKLPVTS 300 (363)
T ss_dssp SCEEEEEEEECS--SSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-HTCCEEE
T ss_pred ceEEEEecchhc--CCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHH-cCCcEEE
Confidence 899998887531 2234 45555554333333567887776542 233345667777765 4566553
No 297
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=46.33 E-value=69 Score=35.42 Aligned_cols=114 Identities=15% Similarity=0.100 Sum_probs=69.1
Q ss_pred CCCCHHH---HHHHHHHHHHHHHHCCCcEEEEEcc----------C---------------CHHHHHHHHHHHHhc--CC
Q psy15811 143 DSMTEAD---LIAWHRPNVEALVRAGVDYLALETI----------P---------------AEKEALALVKLLREF--PG 192 (581)
Q Consensus 143 ~~~~~~~---~~~~~~~q~~~l~~~gvD~l~~ET~----------~---------------~~~E~~aa~~a~~~~--~~ 192 (581)
+.+|.+| +.+.|.+-++...++|.|.|=+=-- | ...-+..+++++|+. ++
T Consensus 129 ~~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~ 208 (671)
T 1ps9_A 129 HELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGND 208 (671)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSS
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCC
Confidence 4577665 5677888888888999999844210 1 122355666667654 37
Q ss_pred CcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCC-----C--------ChhhHHHHHHHHHhhCCCCceEE
Q psy15811 193 QKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-----V--------RPSHVSTLVRCIKQSHPTVQTIV 259 (581)
Q Consensus 193 ~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC-----~--------~p~~~~~~l~~l~~~~~~~p~~~ 259 (581)
.|+++-++..+. ...|.++++++..+..+...++++|.+-. . .+....+.++.+++. .++|++.
T Consensus 209 ~~v~vrls~~~~--~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~iPvi~ 285 (671)
T 1ps9_A 209 FIIIYRLSMLDL--VEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGH-VSLPLVT 285 (671)
T ss_dssp SEEEEEEEEECC--STTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTS-CSSCEEE
T ss_pred ceEEEEECcccc--CCCCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHh-cCceEEE
Confidence 888888887542 23577777765544333356788876521 0 111234667777774 5677654
No 298
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=46.20 E-value=1.4e+02 Score=30.12 Aligned_cols=83 Identities=12% Similarity=0.022 Sum_probs=45.6
Q ss_pred HHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCC--CCHHHHHHHHHhhCCCC-ceEEEeC
Q psy15811 158 VEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG--ELISSAVTSCLLANPDQ-IQAIGVN 234 (581)
Q Consensus 158 ~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G--~~~~~~~~~~~~~~~~~-~~~vGvN 234 (581)
++.|.+.|+|.|-++.-.++.+++. . +-.+.++--+++ .++.| +.+.+.+..+.+....+ -..++..
T Consensus 258 l~~l~~~g~d~~~~d~~~d~~~~~~-------~-g~~~~l~Gnldp--~~l~~t~e~I~~~v~~~l~~~~~~~g~Il~~g 327 (359)
T 2inf_A 258 AGDWHDLPLDVVGLDWRLGIDEARS-------K-GITKTVQGNLDP--SILLAPWEVIEQKTKEILDQGMESDGFIFNLG 327 (359)
T ss_dssp HHHHHTSSCSEEECCTTSCHHHHHH-------T-TCCSEEECCBCG--GGGGSCHHHHHHHHHHHHHHHTTSSCEEBCBS
T ss_pred HHHHHHhCCCEEEeCCCCCHHHHHH-------c-CCCEEEEecCCh--HHhcCCHHHHHHHHHHHHHhCCCCCCeEEeCC
Confidence 4567789999999997777766543 2 222344444444 23333 33444444444321112 3677777
Q ss_pred CC-C----hhhHHHHHHHHHh
Q psy15811 235 CV-R----PSHVSTLVRCIKQ 250 (581)
Q Consensus 235 C~-~----p~~~~~~l~~l~~ 250 (581)
|+ . |+.+..+++.+..
T Consensus 328 cgi~~~~~~enl~a~ve~v~~ 348 (359)
T 2inf_A 328 HGVFPDVSPEVLKKLTAFVHE 348 (359)
T ss_dssp SCCCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCcCHHHHHHHHHHHHH
Confidence 85 2 4566555555443
No 299
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=46.05 E-value=53 Score=32.10 Aligned_cols=103 Identities=13% Similarity=0.079 Sum_probs=65.7
Q ss_pred CCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCC---------CcCCCCCCHHHHHHHHHhhCCCCceEEEeCC
Q psy15811 165 GVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDD---------THTSHGELISSAVTSCLLANPDQIQAIGVNC 235 (581)
Q Consensus 165 gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~---------g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC 235 (581)
-|.+=++-.-+ .+....+.+++. +..|++.+-.++. +.+..|.+.++....+......-+.++|+|-
T Consensus 56 pvT~Ai~P~~p---~~~~~a~~A~~~-G~EvllHlPMep~~~p~~~~gp~~L~~~~s~~ei~~~l~~al~~vP~a~GvnN 131 (261)
T 2qv5_A 56 EVTLGFAASGN---SLQRWMQDARRE-GHEILLQIPLEPFGYPGTNPGPDTLLAGDPAKVNIDRLHRSMAKITNYTGVMN 131 (261)
T ss_dssp TSEEEEETTCS---SHHHHHHHHHHH-TCCEEEEEEECCTTTTTSCCCTTCBCTTSCHHHHHHHHHHHHTTCCCCSEEEE
T ss_pred CeEEEECCCCC---CHHHHHHHHHHC-CCEEEEECCCCCCCCCCCCCCcCcCcCCCCHHHHHHHHHHHHHHCCCcEEEec
Confidence 45555544444 445555555554 6778998877632 3456677777777666654456678999994
Q ss_pred -------CChhhHHHHHHHHHhhCCCCceEEecCCCccccCCCc-----hhhhccccCcc
Q psy15811 236 -------VRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSF-----TSQVSRHTIKD 283 (581)
Q Consensus 236 -------~~p~~~~~~l~~l~~~~~~~p~~~~pnag~~~~dG~~-----gt~L~~~~g~~ 283 (581)
+....|..+++.+++. |+.++|.+. +.++.+..|++
T Consensus 132 HmGS~~T~~~~~M~~vm~~L~~~------------gL~FlDS~Ts~~S~a~~~A~~~gvp 179 (261)
T 2qv5_A 132 YLGGRFLAEQSALEPVMRDIGKR------------GLLFLDDGSSAQSLSGGIAKAISAP 179 (261)
T ss_dssp EECTTGGGCHHHHHHHHHHHHHT------------TCEEEECSCCTTCCHHHHHHHHTCC
T ss_pred ccccchhcCHHHHHHHHHHHHHC------------CCEEEcCCCCcccHHHHHHHHcCCC
Confidence 4677888899988873 455566553 44555554554
No 300
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=45.96 E-value=23 Score=34.77 Aligned_cols=50 Identities=8% Similarity=0.126 Sum_probs=38.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcC-CCcEE
Q psy15811 144 SMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFP-GQKAW 196 (581)
Q Consensus 144 ~~~~~~~~~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~-~~pv~ 196 (581)
.-+.+++.+.-.+.++.|.+.|+|+|++=+.+.-. .+++.+++.. ++||+
T Consensus 48 ~~~~~~i~~~~~~~~~~L~~~g~~~iVIACNTa~~---~al~~lr~~~~~iPvi 98 (268)
T 3out_A 48 TKSRATIQKFAAQTAKFLIDQEVKAIIIACNTISA---IAKDIVQEIAKAIPVI 98 (268)
T ss_dssp TSCHHHHHHHHHHHHHHHHHTTCSEEEECCHHHHH---HHHHHHHHHHTTSCEE
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHHHhcCCCCEE
Confidence 46899999999999999999999999987643221 2556676554 78977
No 301
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=45.89 E-value=78 Score=31.46 Aligned_cols=172 Identities=13% Similarity=0.103 Sum_probs=85.7
Q ss_pred ceEEeccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec---ccCC------HHHHHHHHHHHH
Q psy15811 374 SQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE---TIPA------EKEALALVKLLR 444 (581)
Q Consensus 374 v~VagsiGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l~~~gvD~i~~E---T~p~------~~Ea~a~~~~~~ 444 (581)
.+|.|=+-=++++|+||..|. +.+.+ .++++.+.+.|+|+|=+- |-|. ..|..-++..++
T Consensus 23 ~~iMgilNvTPDSFsdgg~~~-------~~~~a----~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~ 91 (294)
T 2y5s_A 23 PLVMGILNATPDSFSDGGRFL-------ARDDA----LRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVE 91 (294)
T ss_dssp CEEEEEEECCC-----------------CTTHH----HHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCCCCCCCCCcC-------CHHHH----HHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHH
Confidence 578888888888999886552 22333 356677788999997544 3454 555555555555
Q ss_pred hcC--CCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECCCCCccchHHHHHHHhhCCCCeEEEeeCCCCC
Q psy15811 445 EFP--GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGV 522 (581)
Q Consensus 445 ~~~--~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~ypNag~~ 522 (581)
... ++| +|+-. .. .+++++..+. ++. -||-++-.....+++..+.. +.|+++.++.|.+
T Consensus 92 ~l~~~~vp--iSIDT---------~~-~~Va~aAl~a---Ga~--iINdVsg~~d~~m~~~~a~~--~~~vVlmh~~G~p 152 (294)
T 2y5s_A 92 ALRPLNVP--LSIDT---------YK-PAVMRAALAA---GAD--LINDIWGFRQPGAIDAVRDG--NSGLCAMHMLGEP 152 (294)
T ss_dssp HHGGGCSC--EEEEC---------CC-HHHHHHHHHH---TCS--EEEETTTTCSTTHHHHHSSS--SCEEEEECCCEET
T ss_pred HHhhCCCe--EEEEC---------CC-HHHHHHHHHc---CCC--EEEECCCCCchHHHHHHHHh--CCCEEEECCCCCC
Confidence 322 555 45521 11 2233333222 333 36663322234455555554 5899999997754
Q ss_pred cccccccccCCcC-----HHHHHHHHHHHHHcCCc---EE---eecCCCch-HHHHHHHHHHhccc
Q psy15811 523 WDSVHMKWLDTED-----EYSILHYVPQWLEEGVN---II---GGCCEVTS-YEIQQMRIMIDEFN 576 (581)
Q Consensus 523 ~~~~~~~~~~~~~-----~~~~~~~~~~w~~~G~~---ii---GGCCGt~P-~hI~al~~~l~~~~ 576 (581)
.+.......|. + ...+.+.+....+.|+. || |=--+-|. +|--++-+.++.++
T Consensus 153 ~tm~~~~~~y~-dv~~ev~~~l~~~i~~a~~~Gi~~~~IilDPG~Gf~kt~~~~n~~ll~~l~~l~ 217 (294)
T 2y5s_A 153 QTMQVGEPDYG-DVVTDVRDFLAARAQALRDAGVAAERICVDPGFGFGKAVVDDNYALLAALPDTA 217 (294)
T ss_dssp TTTEECCCCCS-SHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSSCTTHHHHHHHHTGGGGS
T ss_pred ccccccCCccc-cHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCcccccchHHHHHHHHHHHHHH
Confidence 33210011121 2 23455666777788986 54 21124455 66555555555544
No 302
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=45.75 E-value=1.2e+02 Score=29.74 Aligned_cols=67 Identities=22% Similarity=0.260 Sum_probs=42.2
Q ss_pred HHHh-cCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCC-CCceEEEeCCCCh-------------hhHHHHHHHHHh
Q psy15811 186 LLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIGVNCVRP-------------SHVSTLVRCIKQ 250 (581)
Q Consensus 186 a~~~-~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~-~~~~~vGvNC~~p-------------~~~~~~l~~l~~ 250 (581)
.+++ .++.|+++++.. .++++....+..... .++++|=+|+..| +.+.++++.+++
T Consensus 91 ~~~~~~~~~p~~v~l~~---------~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~ 161 (311)
T 1ep3_A 91 WLNENFPELPIIANVAG---------SEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKA 161 (311)
T ss_dssp HHHHHCTTSCEEEEECC---------SSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHH
T ss_pred HHHhcCCCCcEEEEEcC---------CCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHH
Confidence 3444 457899998843 234544444333334 7899888877533 445778888887
Q ss_pred hCCCCceEEecC
Q psy15811 251 SHPTVQTIVYPN 262 (581)
Q Consensus 251 ~~~~~p~~~~pn 262 (581)
. .+.|++++-.
T Consensus 162 ~-~~~pv~vk~~ 172 (311)
T 1ep3_A 162 V-SKVPLYVKLS 172 (311)
T ss_dssp H-CSSCEEEEEC
T ss_pred h-cCCCEEEEEC
Confidence 5 5788887643
No 303
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=45.74 E-value=69 Score=30.70 Aligned_cols=27 Identities=22% Similarity=0.329 Sum_probs=23.4
Q ss_pred CChHHHHHHHHHHHHhccccccccc-cc
Q psy15811 39 TEPEACVETHRDFIRAGADIIQSSC-YQ 65 (581)
Q Consensus 39 ~~Pe~v~~iH~~yl~AGAdiI~TnT-f~ 65 (581)
..+|.+...-+--.+||||.|.|.| |.
T Consensus 143 ~t~eei~~a~~ia~~aGADfVKTSTGf~ 170 (231)
T 3ndo_A 143 SGEPLLADVCRVARDAGADFVKTSTGFH 170 (231)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEECCCSCC
T ss_pred CCHHHHHHHHHHHHHHCcCEEEcCCCCC
Confidence 3678888888888999999999999 75
No 304
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=45.63 E-value=1e+02 Score=31.84 Aligned_cols=65 Identities=18% Similarity=0.159 Sum_probs=42.0
Q ss_pred HHHHHHHHhCCCCEEEecc-cCCHHHHHHHHHHHHhcC-CCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEE
Q psy15811 411 RPNVEALVRAGVDYLALET-IPAEKEALALVKLLREFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIG 488 (581)
Q Consensus 411 ~~~~~~l~~~gvD~i~~ET-~p~~~Ea~a~~~~~~~~~-~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iG 488 (581)
.++++.+.++|+|+|.+-+ ..+.......++.+++.. ++|+++. .+.+.+++.... ..++++|.
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~----------~v~~~~~a~~a~----~~Gad~I~ 220 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAG----------NIVTKEAALDLI----SVGADCLK 220 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEE----------EECSHHHHHHHH----TTTCSEEE
T ss_pred HHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEc----------CCCcHHHHHHHH----hcCCCEEE
Confidence 3667778889999998743 233455666778888655 8999872 123455554433 34678777
Q ss_pred E
Q psy15811 489 V 489 (581)
Q Consensus 489 i 489 (581)
+
T Consensus 221 v 221 (404)
T 1eep_A 221 V 221 (404)
T ss_dssp E
T ss_pred E
Confidence 7
No 305
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=45.56 E-value=49 Score=31.42 Aligned_cols=99 Identities=12% Similarity=0.212 Sum_probs=58.8
Q ss_pred HHHHHHHHHHCCCcEEEEE-----ccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCc
Q psy15811 154 HRPNVEALVRAGVDYLALE-----TIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 228 (581)
Q Consensus 154 ~~~q~~~l~~~gvD~l~~E-----T~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~ 228 (581)
..++++.+.++|+|++=+- ++|.+......++.+|+.++.|+.+-|.+.+. +.-++.+. ..|+
T Consensus 19 l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv~dp-----~~~i~~~~-------~aGa 86 (230)
T 1tqj_A 19 LGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMIVEP-----EKYVEDFA-------KAGA 86 (230)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEESSSG-----GGTHHHHH-------HHTC
T ss_pred HHHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhcCCcEEEEEEccCH-----HHHHHHHH-------HcCC
Confidence 4567888889999987222 22344444467778887667898888877532 22233322 2466
Q ss_pred eEEEeCCC--ChhhHHHHHHHHHhhCCCCceEEecCCC
Q psy15811 229 QAIGVNCV--RPSHVSTLVRCIKQSHPTVQTIVYPNKG 264 (581)
Q Consensus 229 ~~vGvNC~--~p~~~~~~l~~l~~~~~~~p~~~~pnag 264 (581)
++|-+=.- ..++..+.++.++......-+++.|+..
T Consensus 87 dgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t~ 124 (230)
T 1tqj_A 87 DIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTP 124 (230)
T ss_dssp SEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCC
T ss_pred CEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCCCc
Confidence 77744443 3355667778777643344455555554
No 306
>2g04_A Probable fatty-acid-COA racemase FAR; isomerase; 2.70A {Mycobacterium tuberculosis}
Probab=45.50 E-value=7.7 Score=39.99 Aligned_cols=71 Identities=13% Similarity=0.131 Sum_probs=44.3
Q ss_pred cccCCChHHHHHHHHHHHHhccccccccccccccccHhhcCCCHHHHHHHHHHHHHHHHHHhhhhcCCCccccccccccc
Q psy15811 35 VYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLL 114 (581)
Q Consensus 35 ~~~l~~Pe~v~~iH~~yl~AGAdiI~TnTf~a~~~~l~~~g~~~~~~~~i~~~av~lA~~a~~~~~~~~~~~~~~~~~~~ 114 (581)
.++|.+|+ ++-++- -+.|||+.+| |+ +..+.++|++.+.+++ . .
T Consensus 62 ~LDLk~~~---~~l~~L-v~~ADVvien-fr--PG~~~rlGl~ye~L~~--------------~------------n--- 105 (359)
T 2g04_A 62 DLDVKTQP---QAMLEL-AAKADVLLDC-FR--PGTCERLGIGPDDCAS--------------V------------N--- 105 (359)
T ss_dssp ECCC---C---CTTHHH-HTTCSEEEEC-SC--TTHHHHSSCSHHHHHH--------------H------------C---
T ss_pred EeeCCCHH---HHHHHH-HHhCCEEEeC-CC--ccHHHHhCCCHHHHHH--------------h------------C---
Confidence 46688888 444443 4669999999 65 6678899998655432 1 1
Q ss_pred CCCeEEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHH
Q psy15811 115 TGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLI 151 (581)
Q Consensus 115 ~~~~~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~ 151 (581)
+.+|..||-.||. +|+|.+..-+|.+.
T Consensus 106 --P~LIy~sisGfG~--------~GP~a~~pg~D~~~ 132 (359)
T 2g04_A 106 --PRLIFARITGWGQ--------DGPLASTAGHDINY 132 (359)
T ss_dssp --TTCEEEEEESSCS--------SSSGGGSCCCHHHH
T ss_pred --CCeEEEEEecCCC--------CCCCcCCCCchHHH
Confidence 6678889988886 24444444445443
No 307
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=45.46 E-value=37 Score=32.66 Aligned_cols=98 Identities=17% Similarity=0.191 Sum_probs=48.3
Q ss_pred HHHHHHCCCcEEEEEccCCHH--HHHHHHHHHHhcC--CCcEEEEEEEcC-CC----cCC-----CCCCHHHHHHHHHhh
Q psy15811 158 VEALVRAGVDYLALETIPAEK--EALALVKLLREFP--GQKAWLSFSCKD-DT----HTS-----HGELISSAVTSCLLA 223 (581)
Q Consensus 158 ~~~l~~~gvD~l~~ET~~~~~--E~~aa~~a~~~~~--~~pv~isft~~~-~g----~l~-----~G~~~~~~~~~~~~~ 223 (581)
++.+++.|+|.+++=+..--. +...+.+.+++.. .-++++++.+.. +| .+. ++.+..+.+..+.+
T Consensus 89 i~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~- 167 (266)
T 2w6r_A 89 FLEAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEK- 167 (266)
T ss_dssp HHHHHHHTCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH-
T ss_pred HHHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHH-
Confidence 555667899999887653311 2222333333332 135666666530 11 111 12356666666553
Q ss_pred CCCCceEEEeCCCChhh-----HHHHHHHHHhhCCCCceEE
Q psy15811 224 NPDQIQAIGVNCVRPSH-----VSTLVRCIKQSHPTVQTIV 259 (581)
Q Consensus 224 ~~~~~~~vGvNC~~p~~-----~~~~l~~l~~~~~~~p~~~ 259 (581)
.++..|.++-...+. -.+.++.+++. .++|+++
T Consensus 168 --~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~-~~ipvia 205 (266)
T 2w6r_A 168 --RGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-TTLPIIA 205 (266)
T ss_dssp --TTCSEEEEEETTTTTTCSCCCHHHHHHHGGG-CCSCEEE
T ss_pred --cCCCEEEEEeecCCCCcCCCCHHHHHHHHHH-cCCCEEE
Confidence 677777776421111 14667777764 5555554
No 308
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=45.27 E-value=89 Score=31.29 Aligned_cols=87 Identities=9% Similarity=0.130 Sum_probs=56.6
Q ss_pred HHHHHHCCC-cEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC
Q psy15811 158 VEALVRAGV-DYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 236 (581)
Q Consensus 158 ~~~l~~~gv-D~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~ 236 (581)
+.+..++|. +++..+ ..+.+++...++.+++..+.|+.+.+.+.+ ..+.+.+..+.+ .++++|-+++.
T Consensus 29 a~av~~aG~lG~i~~~-~~~~~~~~~~i~~i~~~~~~p~gvnl~~~~-------~~~~~~~~~a~~---~g~d~V~~~~g 97 (332)
T 2z6i_A 29 AGAVSKAGGLGIIGGG-NAPKEVVKANIDKIKSLTDKPFGVNIMLLS-------PFVEDIVDLVIE---EGVKVVTTGAG 97 (332)
T ss_dssp HHHHHHHTSBEEEECT-TCCHHHHHHHHHHHHHHCCSCEEEEECTTS-------TTHHHHHHHHHH---TTCSEEEECSS
T ss_pred HHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhcCCCEEEEecCCC-------CCHHHHHHHHHH---CCCCEEEECCC
Confidence 444556665 665443 457888888888888766789988775521 135666666654 78999999998
Q ss_pred ChhhHHHHHHHHHhhCCCCceEEe
Q psy15811 237 RPSHVSTLVRCIKQSHPTVQTIVY 260 (581)
Q Consensus 237 ~p~~~~~~l~~l~~~~~~~p~~~~ 260 (581)
.|..+ ++.++. .+.|+++.
T Consensus 98 ~p~~~---i~~l~~--~g~~v~~~ 116 (332)
T 2z6i_A 98 NPSKY---MERFHE--AGIIVIPV 116 (332)
T ss_dssp CGGGT---HHHHHH--TTCEEEEE
T ss_pred ChHHH---HHHHHH--cCCeEEEE
Confidence 88654 344444 24566543
No 309
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=44.99 E-value=64 Score=33.50 Aligned_cols=98 Identities=18% Similarity=0.166 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHh----cCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCc
Q psy15811 153 WHRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 228 (581)
Q Consensus 153 ~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~----~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~ 228 (581)
.-.+|+..|.++|+|++=+ |+|+.+++++.-+.-++ ...+|++.-|.|+. ++ .-.++..+. .++
T Consensus 39 aTv~QI~~L~~aG~eiVRv-aVp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~--~~-----al~a~~~~a----~~~ 106 (406)
T 4g9p_A 39 ATTAQVLELHRAGSEIVRL-TVNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNG--HL-----LLRKYPKMA----EAL 106 (406)
T ss_dssp HHHHHHHHHHHHTCSEEEE-ECCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSSH--HH-----HHHHCHHHH----HHC
T ss_pred HHHHHHHHHHHcCCCEEEE-ecCCHHHHHhHHHHHHHHHhcCCCCceEeeecccH--HH-----HHHHHHHHH----hHH
Confidence 4567999999999999875 68998777665443332 14799998777751 11 111111221 235
Q ss_pred eEEEeCCC--C-----hhhHHHHHHHHHhhCCCCceEEecCCC
Q psy15811 229 QAIGVNCV--R-----PSHVSTLVRCIKQSHPTVQTIVYPNKG 264 (581)
Q Consensus 229 ~~vGvNC~--~-----p~~~~~~l~~l~~~~~~~p~~~~pnag 264 (581)
+.+=+|=+ + .+.+.++++..+.+ ++|+=+=-|.|
T Consensus 107 dkiRINPGNig~~~k~~e~~~~vv~~ak~~--~~pIRIGVN~G 147 (406)
T 4g9p_A 107 DKFRINPGTLGRGRHKDEHFAEMIRIAMDL--GKPVRIGANWG 147 (406)
T ss_dssp SEEEECTTSSCSTHHHHHHHHHHHHHHHHH--TCCEEEEEEGG
T ss_pred hhcccCccccCccccHHHHHHHHHHHHHHc--cCCceeccccc
Confidence 66777754 2 24455666666653 45665555555
No 310
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=44.95 E-value=68 Score=32.75 Aligned_cols=153 Identities=9% Similarity=0.065 Sum_probs=85.9
Q ss_pred CCCH---HHHHHHHHHHHHHHHhCCCCEEEecc----------cCC-----------H-HH---HHHHHHHHHhcC--CC
Q psy15811 400 SMTE---ADLIAWHRPNVEALVRAGVDYLALET----------IPA-----------E-KE---ALALVKLLREFP--GQ 449 (581)
Q Consensus 400 ~~~~---~~~~~~~~~~~~~l~~~gvD~i~~ET----------~p~-----------~-~E---a~a~~~~~~~~~--~~ 449 (581)
.++. +++.+.|.+.++...++|.|.|=+=- .|. + .. +..+++++++.. +.
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~ 226 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENL 226 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCc
Confidence 3554 56677888888888899999984432 121 1 22 345666666543 57
Q ss_pred eEEEEEEEcCCCcCCCC-CcHHHHHHHHHhhCCCCceEEEECCC----------CCccchHHHHHHHhhCCCCeEEEeeC
Q psy15811 450 KAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCV----------RPSHVSTLVRCIKQSHPTVQTIVYPN 518 (581)
Q Consensus 450 pv~iSft~~~~~~l~~G-~~~~~~~~~l~~~~~~~~~~iGiNC~----------~p~~~~~~l~~l~~~~~~~pl~~ypN 518 (581)
|+.+-++..+. ...| .++++.+..+..+...+++.|-+-.. ++..-..+++.+++.. ++|+++ |
T Consensus 227 pV~vRis~~~~--~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~--~ 301 (363)
T 3l5l_A 227 PLTARFGVLEY--DGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREA-KLPVTS--A 301 (363)
T ss_dssp CEEEEEEEECS--SSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-TCCEEE--C
T ss_pred eEEEEecchhc--CCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHc-CCcEEE--e
Confidence 89998887432 2235 55666655554444556777666541 2333456677777765 578764 2
Q ss_pred CCCCcccccccccCCcCHHHHHHHHHHHHHcC-CcEEeecCC--CchHHHHHHHHHHh
Q psy15811 519 KGGVWDSVHMKWLDTEDEYSILHYVPQWLEEG-VNIIGGCCE--VTSYEIQQMRIMID 573 (581)
Q Consensus 519 ag~~~~~~~~~~~~~~~~~~~~~~~~~w~~~G-~~iiGGCCG--t~P~hI~al~~~l~ 573 (581)
.| ..+ + +.+.+.++.| +.+|+=+=. .+|+-.+.+++.+.
T Consensus 302 Gg-I~s-----------~----e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~lg 343 (363)
T 3l5l_A 302 WG-FGT-----------P----QLAEAALQANQLDLVSVGRAHLADPHWAYFAAKELG 343 (363)
T ss_dssp SS-TTS-----------H----HHHHHHHHTTSCSEEECCHHHHHCTTHHHHHHHHTT
T ss_pred CC-CCC-----------H----HHHHHHHHCCCccEEEecHHHHhCchHHHHHHHHcC
Confidence 22 111 1 2234556666 666653211 24666666655543
No 311
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=44.68 E-value=90 Score=31.86 Aligned_cols=116 Identities=18% Similarity=0.147 Sum_probs=64.8
Q ss_pred CCCCCHHHHH---HHHHHHHHHHHHCCCcEEEEEcc----------C-----------C----HHHHHHHHHHHHhc-C-
Q psy15811 142 VDSMTEADLI---AWHRPNVEALVRAGVDYLALETI----------P-----------A----EKEALALVKLLREF-P- 191 (581)
Q Consensus 142 ~~~~~~~~~~---~~~~~q~~~l~~~gvD~l~~ET~----------~-----------~----~~E~~aa~~a~~~~-~- 191 (581)
.+++|.+|+. +.|.+-++...++|.|.|=+=-- | + ..-+..+++++|+. .
T Consensus 148 p~~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~ 227 (365)
T 2gou_A 148 PRAMTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGA 227 (365)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCG
T ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCC
Confidence 3467776654 66666677778899999855210 0 1 11244556666643 2
Q ss_pred CCcEEEEEEEcC-CCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC----ChhhHHHHHHHHHhhCCCCceEE
Q psy15811 192 GQKAWLSFSCKD-DTHTSHGELISSAVTSCLLANPDQIQAIGVNCV----RPSHVSTLVRCIKQSHPTVQTIV 259 (581)
Q Consensus 192 ~~pv~isft~~~-~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~----~p~~~~~~l~~l~~~~~~~p~~~ 259 (581)
+ ||.+-++... .....+|.++++++..+..+...++++|-+-.. .|..-.+.++.+++. .++||+.
T Consensus 228 ~-pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~-~~iPvi~ 298 (365)
T 2gou_A 228 E-RVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREA-YQGVLIY 298 (365)
T ss_dssp G-GEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHH-CCSEEEE
T ss_pred C-cEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHH-CCCcEEE
Confidence 4 8888776632 111235566666544333333577888877653 122112566777765 5566554
No 312
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=44.51 E-value=37 Score=32.35 Aligned_cols=96 Identities=15% Similarity=0.218 Sum_probs=50.5
Q ss_pred HHHHHHHHCCCcEEEEEc--cCCHHHHHHHHHHHHhcCCCcEEEEEEEcC-CC---------cCCCCCCHHHHHHHHHhh
Q psy15811 156 PNVEALVRAGVDYLALET--IPAEKEALALVKLLREFPGQKAWLSFSCKD-DT---------HTSHGELISSAVTSCLLA 223 (581)
Q Consensus 156 ~q~~~l~~~gvD~l~~ET--~~~~~E~~aa~~a~~~~~~~pv~isft~~~-~g---------~l~~G~~~~~~~~~~~~~ 223 (581)
++++.+++.|+|.+++=+ +.+...+..+++.+. .-.+.+++++.. +| .-.++.+..+.+..+.+
T Consensus 87 ~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~g---~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~- 162 (253)
T 1thf_D 87 ETASELILRGADKVSINTAAVENPSLITQIAQTFG---SQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEK- 162 (253)
T ss_dssp HHHHHHHHTTCSEEEESHHHHHCTHHHHHHHHHHC---GGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH-
T ss_pred HHHHHHHHcCCCEEEEChHHHhChHHHHHHHHHcC---CCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHH-
Confidence 457777789999998754 344444444444432 113445555431 11 11122355666666654
Q ss_pred CCCCceEEEeCCCChhh-----HHHHHHHHHhhCCCCceE
Q psy15811 224 NPDQIQAIGVNCVRPSH-----VSTLVRCIKQSHPTVQTI 258 (581)
Q Consensus 224 ~~~~~~~vGvNC~~p~~-----~~~~l~~l~~~~~~~p~~ 258 (581)
.+++.|.++...++. -.+.++++.+. .++|++
T Consensus 163 --~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~-~~ipvi 199 (253)
T 1thf_D 163 --RGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-TTLPII 199 (253)
T ss_dssp --TTCSEEEEEETTTTTSCSCCCHHHHHHHGGG-CCSCEE
T ss_pred --CCCCEEEEEeccCCCCCCCCCHHHHHHHHHh-cCCCEE
Confidence 677777776543221 14566777654 344443
No 313
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=44.32 E-value=55 Score=30.57 Aligned_cols=124 Identities=15% Similarity=0.089 Sum_probs=67.3
Q ss_pred HHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCC
Q psy15811 156 PNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 235 (581)
Q Consensus 156 ~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC 235 (581)
++++..++.|+|++..-- .+ ..++++.++. +.|+++. + .+++++..+. ..|+++|++
T Consensus 74 d~~~~A~~~GAd~v~~~~-~d----~~v~~~~~~~-g~~~i~G--~---------~t~~e~~~A~----~~Gad~v~~-- 130 (207)
T 2yw3_A 74 KEAEAALEAGAAFLVSPG-LL----EEVAALAQAR-GVPYLPG--V---------LTPTEVERAL----ALGLSALKF-- 130 (207)
T ss_dssp HHHHHHHHHTCSEEEESS-CC----HHHHHHHHHH-TCCEEEE--E---------CSHHHHHHHH----HTTCCEEEE--
T ss_pred HHHHHHHHcCCCEEEcCC-CC----HHHHHHHHHh-CCCEEec--C---------CCHHHHHHHH----HCCCCEEEE--
Confidence 567888889999997542 22 2344555553 6777764 1 2367765544 368999999
Q ss_pred CChhh---HHHHHHHHHhhCCCCceEEecCCCccccCCCchhhhccccCcccCCCCcccccccCCChHHHHHHHHHHHHH
Q psy15811 236 VRPSH---VSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRG 312 (581)
Q Consensus 236 ~~p~~---~~~~l~~l~~~~~~~p~~~~pnag~~~~dG~~gt~L~~~~g~~~~g~~lws~~~~~~~Pe~v~~vh~~yl~a 312 (581)
.|.. =.+.|+.++....++|++ +--|+.. + -..++.+. |.+.. ..=|.... .+++.+.+.-++|++.
T Consensus 131 -fpa~~~gG~~~lk~l~~~~~~ipvv--aiGGI~~-~--n~~~~l~a-Ga~~v--avgSai~~-~d~~~i~~~a~~~~~~ 200 (207)
T 2yw3_A 131 -FPAEPFQGVRVLRAYAEVFPEVRFL--PTGGIKE-E--HLPHYAAL-PNLLA--VGGSWLLQ-GNLEAVRAKVRAAKAL 200 (207)
T ss_dssp -TTTTTTTHHHHHHHHHHHCTTCEEE--EBSSCCG-G--GHHHHHTC-SSBSC--EEESGGGS-SCHHHHHHHHHHHHHH
T ss_pred -ecCccccCHHHHHHHHhhCCCCcEE--EeCCCCH-H--HHHHHHhC-CCcEE--EEehhhhC-CCHHHHHHHHHHHHHH
Confidence 3322 135677777652356665 3334321 1 11222222 33211 01112122 6777888877777765
No 314
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=44.32 E-value=26 Score=34.38 Aligned_cols=41 Identities=22% Similarity=0.202 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEE
Q psy15811 151 IAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAW 196 (581)
Q Consensus 151 ~~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~ 196 (581)
.+.-.+++.++.++|+|.|++|-++. ++++.+.+ +. ++|++
T Consensus 160 a~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~---~l-~iP~i 200 (264)
T 1m3u_A 160 GDQLLSDALALEAAGAQLLVLECVPV-ELAKRITE---AL-AIPVI 200 (264)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEESCCH-HHHHHHHH---HC-SSCEE
T ss_pred HHHHHHHHHHHHHCCCcEEEEecCCH-HHHHHHHH---hC-CCCEE
Confidence 36677789999999999999999984 44443333 33 57766
No 315
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=44.29 E-value=1.5e+02 Score=29.85 Aligned_cols=100 Identities=11% Similarity=0.048 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHCCCcEEEEEc----------------cCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCH--
Q psy15811 152 AWHRPNVEALVRAGVDYLALET----------------IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELI-- 213 (581)
Q Consensus 152 ~~~~~q~~~l~~~gvD~l~~ET----------------~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~-- 213 (581)
+.|.+-++.+.+.|+|.|=+-- +.+.+-+..+++++++..+.||.+-+...-+ +..+.
T Consensus 70 ~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~----~~~~~~~ 145 (350)
T 3b0p_A 70 KSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLE----GKETYRG 145 (350)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBT----TCCCHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcC----ccccHHH
Confidence 4566677778889999986653 2345667778888886558998885543211 11233
Q ss_pred -HHHHHHHHhhCCCCceEEEeCCCCh------h-------hHHHHHHHHHhhCCCCceE
Q psy15811 214 -SSAVTSCLLANPDQIQAIGVNCVRP------S-------HVSTLVRCIKQSHPTVQTI 258 (581)
Q Consensus 214 -~~~~~~~~~~~~~~~~~vGvNC~~p------~-------~~~~~l~~l~~~~~~~p~~ 258 (581)
.+.+..+. ..|+++|-|-+... . .-.+.++.+++...++||+
T Consensus 146 ~~~~a~~l~---~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVi 201 (350)
T 3b0p_A 146 LAQSVEAMA---EAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFV 201 (350)
T ss_dssp HHHHHHHHH---HTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEE
T ss_pred HHHHHHHHH---HcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEE
Confidence 33344443 47788887766311 0 1235667777652255654
No 316
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=44.28 E-value=2.1e+02 Score=26.96 Aligned_cols=111 Identities=11% Similarity=0.085 Sum_probs=67.9
Q ss_pred HHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECC
Q psy15811 412 PNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 491 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC 491 (581)
++++...++|+|++..- .. -..++++.++ .+.|+++.. .+++++..+. ..+++.|++
T Consensus 89 d~~~~A~~aGAd~v~~p---~~--d~~v~~~~~~-~g~~~i~G~-----------~t~~e~~~A~----~~Gad~vk~-- 145 (225)
T 1mxs_A 89 SMFAAVEAAGAQFVVTP---GI--TEDILEAGVD-SEIPLLPGI-----------STPSEIMMGY----ALGYRRFKL-- 145 (225)
T ss_dssp HHHHHHHHHTCSSEECS---SC--CHHHHHHHHH-CSSCEECEE-----------CSHHHHHHHH----TTTCCEEEE--
T ss_pred HHHHHHHHCCCCEEEeC---CC--CHHHHHHHHH-hCCCEEEee-----------CCHHHHHHHH----HCCCCEEEE--
Confidence 77888888999999743 32 1345555555 588888752 1356666654 456788898
Q ss_pred CCCc-cc--hHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHHH-cCCcEEeecCCCchHHH
Q psy15811 492 VRPS-HV--STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLE-EGVNIIGGCCEVTSYEI 565 (581)
Q Consensus 492 ~~p~-~~--~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~-~G~~iiGGCCGt~P~hI 565 (581)
-|. .+ ...|+.++...+++|++ |-.|-.. . .+.+|++ .|+..+||--=+.++.|
T Consensus 146 -FPa~~~~G~~~lk~i~~~~~~ipvv--aiGGI~~-~----------------N~~~~l~~~Ga~~v~gSai~~~~~i 203 (225)
T 1mxs_A 146 -FPAEISGGVAAIKAFGGPFGDIRFC--PTGGVNP-A----------------NVRNYMALPNVMCVGTTWMLDSSWI 203 (225)
T ss_dssp -TTHHHHTHHHHHHHHHTTTTTCEEE--EBSSCCT-T----------------THHHHHHSTTBCCEEECTTSCHHHH
T ss_pred -ccCccccCHHHHHHHHhhCCCCeEE--EECCCCH-H----------------HHHHHHhccCCEEEEEchhcCchhh
Confidence 442 22 45677777654356753 4444211 1 1377999 68888886554554443
No 317
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=44.13 E-value=1.8e+02 Score=29.23 Aligned_cols=170 Identities=12% Similarity=0.056 Sum_probs=75.0
Q ss_pred CceEEeccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec---ccCC-----HHHHHHH---HH
Q psy15811 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE---TIPA-----EKEALAL---VK 441 (581)
Q Consensus 373 ~v~VagsiGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l~~~gvD~i~~E---T~p~-----~~Ea~a~---~~ 441 (581)
+.+|.|=+--+.++|+||..|. +.+.+ .++++.+.+.|+|+|=+- |-|. .+|.+-+ ++
T Consensus 41 ~~~vMGIlNvTPDSFsdgg~~~-------~~~~a----~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~ 109 (318)
T 2vp8_A 41 RALIMAIVNRTPDSFYDKGATF-------SDAAA----RDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIE 109 (318)
T ss_dssp SCEEEEEEC---------------------CHHH----HHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHH
T ss_pred CcEEEEEEeCCCCcccCCCccC-------CHHHH----HHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHH
Confidence 4578888888888888886552 22333 356677788999998554 2232 5666555 55
Q ss_pred HHHhcC-CCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECCCCCccchHHHHHHHhhCCCCeEEEeeCCC
Q psy15811 442 LLREFP-GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 520 (581)
Q Consensus 442 ~~~~~~-~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~ypNag 520 (581)
.+++.. ++| +|+-. .. .+++++..+. ++. -||-++-.....+++..+.. +.|+++.++.|
T Consensus 110 ~l~~~~~~vp--ISIDT------~~----~~VaeaAl~a---Ga~--iINDVsg~~d~~m~~vaa~~--g~~vVlmh~~G 170 (318)
T 2vp8_A 110 WLRGAYPDQL--ISVDT------WR----AQVAKAACAA---GAD--LINDTWGGVDPAMPEVAAEF--GAGLVCAHTGG 170 (318)
T ss_dssp HHHHHSTTCE--EEEEC------SC----HHHHHHHHHH---TCC--EEEETTSSSSTTHHHHHHHH--TCEEEEECC--
T ss_pred HHHhhCCCCe--EEEeC------CC----HHHHHHHHHh---CCC--EEEECCCCCchHHHHHHHHh--CCCEEEECCCC
Confidence 555422 554 56621 11 2233333222 333 46664332344555556665 58999999877
Q ss_pred C-CcccccccccCC---cC-----HHHHHHHHHHHHHcCCc---EE---eecCCCchHHHHHHHHHHh
Q psy15811 521 G-VWDSVHMKWLDT---ED-----EYSILHYVPQWLEEGVN---II---GGCCEVTSYEIQQMRIMID 573 (581)
Q Consensus 521 ~-~~~~~~~~~~~~---~~-----~~~~~~~~~~w~~~G~~---ii---GGCCGt~P~hI~al~~~l~ 573 (581)
. +.+.... -.|. .+ .+.+.+.+....+.|+. || |=--+-+.+|--++-+.++
T Consensus 171 ~~p~tmq~~-~~y~~~~~dv~~ev~~~l~~~i~~a~~aGI~~~~IilDPG~GF~Kt~~~nl~ll~~l~ 237 (318)
T 2vp8_A 171 ALPRTRPFR-VSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDPAHDFGKNTFHGLLLLRHVA 237 (318)
T ss_dssp ------------CCSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEETTTTCCTTSHHHHHHHHTHH
T ss_pred CCccccccc-cccccccccHHHHHHHHHHHHHHHHHHcCCChhhEEEcCCCCcccCHHHHHHHHHHHH
Confidence 5 4322211 1110 01 13445556666788984 54 3112445555444444443
No 318
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=44.08 E-value=2.1e+02 Score=28.52 Aligned_cols=81 Identities=12% Similarity=0.133 Sum_probs=55.2
Q ss_pred HHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC
Q psy15811 157 NVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 236 (581)
Q Consensus 157 q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~ 236 (581)
.+.+..++|.--++.-...+.++++..++.+++..+.|+.+.+.+.+ ....+.+..+.+ .+++.|-++..
T Consensus 42 la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~~~~p~gVnl~~~~-------~~~~~~~~~~~~---~g~d~V~l~~g 111 (326)
T 3bo9_A 42 LAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQKTDKPFGVNIILVS-------PWADDLVKVCIE---EKVPVVTFGAG 111 (326)
T ss_dssp HHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTTCSSCEEEEEETTS-------TTHHHHHHHHHH---TTCSEEEEESS
T ss_pred HHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcCCCEEEEEeccC-------CCHHHHHHHHHH---CCCCEEEECCC
Confidence 34555677776666666678888888888888766789998876631 235666666654 67888888887
Q ss_pred ChhhHHHHHHHHHh
Q psy15811 237 RPSHVSTLVRCIKQ 250 (581)
Q Consensus 237 ~p~~~~~~l~~l~~ 250 (581)
.|.. .++.++.
T Consensus 112 ~p~~---~~~~l~~ 122 (326)
T 3bo9_A 112 NPTK---YIRELKE 122 (326)
T ss_dssp CCHH---HHHHHHH
T ss_pred CcHH---HHHHHHH
Confidence 6743 4455544
No 319
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=43.62 E-value=70 Score=32.89 Aligned_cols=112 Identities=13% Similarity=0.073 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEeccc----------CC------------HHH---HHHHHHHHHhcCC-CeEEEEEE
Q psy15811 403 EADLIAWHRPNVEALVRAGVDYLALETI----------PA------------EKE---ALALVKLLREFPG-QKAWLSFS 456 (581)
Q Consensus 403 ~~~~~~~~~~~~~~l~~~gvD~i~~ET~----------p~------------~~E---a~a~~~~~~~~~~-~pv~iSft 456 (581)
.+++.+.|.+.++...++|.|.|=+=-- |. ... +..+++++++..+ -||.+-++
T Consensus 161 I~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls 240 (377)
T 2r14_A 161 IPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLT 240 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEec
Confidence 4666778888888888899999855211 21 123 3445666665333 28888886
Q ss_pred EcCC-CcCCCCCcHHHHHHHHHhhCCCCceEEEECCCC----Cc-cchHHHHHHHhhCCCCeEEE
Q psy15811 457 CKDD-THTSHGELISSAVTSCLLANPDQIQAIGVNCVR----PS-HVSTLVRCIKQSHPTVQTIV 515 (581)
Q Consensus 457 ~~~~-~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~~----p~-~~~~~l~~l~~~~~~~pl~~ 515 (581)
..+. ....+|.+.++++..+..+...+++.|-+-... +. .-...++.+++.. ++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~-~iPvi~ 304 (377)
T 2r14_A 241 PFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRF-KGGLIY 304 (377)
T ss_dssp TTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHC-CSEEEE
T ss_pred cccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHC-CCCEEE
Confidence 5321 112356677776655544445577776664411 11 1234566777765 588765
No 320
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=43.55 E-value=77 Score=31.94 Aligned_cols=59 Identities=17% Similarity=0.185 Sum_probs=40.5
Q ss_pred HHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCC
Q psy15811 160 ALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 235 (581)
Q Consensus 160 ~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC 235 (581)
-.+++|+|+|.+.++ ++++++.+++.++ +..++.+| .|.+.+.+ ..+. ..|+|+|++-.
T Consensus 246 eAl~aGaD~I~LDn~-~~~~l~~av~~l~--~~v~ieaS----------GGIt~~~I-~~~a---~tGVD~isvGa 304 (320)
T 3paj_A 246 EAISAGADIIMLDNF-SLEMMREAVKINA--GRAALENS----------GNITLDNL-KECA---ETGVDYISVGA 304 (320)
T ss_dssp HHHHTTCSEEEEESC-CHHHHHHHHHHHT--TSSEEEEE----------SSCCHHHH-HHHH---TTTCSEEECTH
T ss_pred HHHHcCCCEEEECCC-CHHHHHHHHHHhC--CCCeEEEE----------CCCCHHHH-HHHH---HcCCCEEEECc
Confidence 344689999999996 6788888888775 24555542 34555544 3443 47899998865
No 321
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=43.34 E-value=3.2e+02 Score=30.80 Aligned_cols=83 Identities=16% Similarity=0.221 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEE-EEcc----CCHHHHHHHHHHHHhc----CCCcEEEEEEEcCCCcCCCCCCHH-HH
Q psy15811 147 EADLIAWHRPNVEALVRAGVDYLA-LETI----PAEKEALALVKLLREF----PGQKAWLSFSCKDDTHTSHGELIS-SA 216 (581)
Q Consensus 147 ~~~~~~~~~~q~~~l~~~gvD~l~-~ET~----~~~~E~~aa~~a~~~~----~~~pv~isft~~~~g~l~~G~~~~-~~ 216 (581)
.+.+...|+++++.|.++|++.|- =|.. .+.+...+.-.+++.. ++.++++..++.+ +. +.
T Consensus 181 l~~L~~~y~~~l~~L~~aG~~~VQiDEP~L~~~l~~~~~~~~~~a~~~l~~~~~~~~i~lhtc~G~---------~~~~~ 251 (765)
T 1u1j_A 181 LPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEGQKLQAFTGAYAELESTLSGLNVLVETYFAD---------IPAEA 251 (765)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEECGGGGSCCCHHHHHHHHHHHHHSTTTTCSSEEEEECCSSC---------CCHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcCCccccCCCHHHHHHHHHHHHHHHhhcCCCeEEEEeCCCC---------cchHH
Confidence 578999999999999999999864 3422 1222233333444544 3566665443321 22 34
Q ss_pred HHHHHhhCCCC-ceEEEeCCC-ChhhH
Q psy15811 217 VTSCLLANPDQ-IQAIGVNCV-RPSHV 241 (581)
Q Consensus 217 ~~~~~~~~~~~-~~~vGvNC~-~p~~~ 241 (581)
+..+. ..+ ++++++-+. +++.+
T Consensus 252 ~~~l~---~l~~vd~l~lD~v~~~~~l 275 (765)
T 1u1j_A 252 YKTLT---SLKGVTAFGFDLVRGTKTL 275 (765)
T ss_dssp HHHHT---TCTTCCEEEEESSSCTTHH
T ss_pred HHHHH---cCCCCcEEEEEecCCcccH
Confidence 44443 466 999999997 56443
No 322
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=42.79 E-value=50 Score=32.42 Aligned_cols=57 Identities=19% Similarity=0.159 Sum_probs=38.3
Q ss_pred HCCCcEEEEEccCCHHHHHHHHHHHHh-cCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeC
Q psy15811 163 RAGVDYLALETIPAEKEALALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 234 (581)
Q Consensus 163 ~~gvD~l~~ET~~~~~E~~aa~~a~~~-~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvN 234 (581)
++|+|+|.+-|+ ++++++.+++.++. ++++|+.+|--+ +-+++.+ +. ..|++.||+-
T Consensus 200 ~aGaD~I~ld~~-~~~~l~~~v~~l~~~~~~~~i~AsGGI-------~~~ni~~----~~---~aGaD~i~vG 257 (273)
T 2b7n_A 200 NAGADIVMCDNL-SVLETKEIAAYRDAHYPFVLLEASGNI-------SLESINA----YA---KSGVDAISVG 257 (273)
T ss_dssp HHTCSEEEEETC-CHHHHHHHHHHHHHHCTTCEEEEESSC-------CTTTHHH----HH---TTTCSEEECT
T ss_pred HcCCCEEEECCC-CHHHHHHHHHHhhccCCCcEEEEECCC-------CHHHHHH----HH---HcCCcEEEEc
Confidence 579999999996 58888888887763 456777764211 2233333 22 4788999884
No 323
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=42.78 E-value=33 Score=32.30 Aligned_cols=95 Identities=19% Similarity=0.184 Sum_probs=47.0
Q ss_pred HHHHHHHCCCcEEEEEc--cCCHHHHHHHHHHHHhcCCCcEEEEEEEcC----------CCcCCCCCCHHHHHHHHHhhC
Q psy15811 157 NVEALVRAGVDYLALET--IPAEKEALALVKLLREFPGQKAWLSFSCKD----------DTHTSHGELISSAVTSCLLAN 224 (581)
Q Consensus 157 q~~~l~~~gvD~l~~ET--~~~~~E~~aa~~a~~~~~~~pv~isft~~~----------~g~l~~G~~~~~~~~~~~~~~ 224 (581)
+++.+++.|+|.+.+-+ +.+...+.. .+++.....+.+++.+.. .+......+..+.+..+.+
T Consensus 91 ~~~~~~~~Gad~V~i~~~~~~~~~~~~~---~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~-- 165 (253)
T 1h5y_A 91 DATTLFRAGADKVSVNTAAVRNPQLVAL---LAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEE-- 165 (253)
T ss_dssp HHHHHHHHTCSEEEESHHHHHCTHHHHH---HHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHH--
T ss_pred HHHHHHHcCCCEEEEChHHhhCcHHHHH---HHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHh--
Confidence 45666778999999765 333333333 333321112444444421 1110111345555655553
Q ss_pred CCCceEEEeCCCChhh-----HHHHHHHHHhhCCCCceE
Q psy15811 225 PDQIQAIGVNCVRPSH-----VSTLVRCIKQSHPTVQTI 258 (581)
Q Consensus 225 ~~~~~~vGvNC~~p~~-----~~~~l~~l~~~~~~~p~~ 258 (581)
.+++.|.++...+.. -.+.++.+.+. .++|++
T Consensus 166 -~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~-~~~pvi 202 (253)
T 1h5y_A 166 -LGAGEILLTSIDRDGTGLGYDVELIRRVADS-VRIPVI 202 (253)
T ss_dssp -HTCSEEEEEETTTTTTCSCCCHHHHHHHHHH-CSSCEE
T ss_pred -CCCCEEEEecccCCCCcCcCCHHHHHHHHHh-cCCCEE
Confidence 578888887643321 13556666664 344443
No 324
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=42.70 E-value=29 Score=32.93 Aligned_cols=78 Identities=12% Similarity=0.080 Sum_probs=43.8
Q ss_pred HHHHHHHhCCCCEEEeccc-----CCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceE
Q psy15811 412 PNVEALVRAGVDYLALETI-----PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQA 486 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~-----p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~ 486 (581)
+.++.+.++|+|.|-+-++ +.... ..++.+++..++|++++--++ +++++-..+ ..+++.
T Consensus 35 ~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~~~ipv~v~ggi~---------~~~~~~~~l----~~Gad~ 99 (244)
T 2y88_A 35 DAALGWQRDGAEWIHLVDLDAAFGRGSNH--ELLAEVVGKLDVQVELSGGIR---------DDESLAAAL----ATGCAR 99 (244)
T ss_dssp HHHHHHHHTTCSEEEEEEHHHHTTSCCCH--HHHHHHHHHCSSEEEEESSCC---------SHHHHHHHH----HTTCSE
T ss_pred HHHHHHHHcCCCEEEEEcCcccccCCChH--HHHHHHHHhcCCcEEEECCCC---------CHHHHHHHH----HcCCCE
Confidence 5677888899999987553 22212 445555555689999854332 244433332 124566
Q ss_pred EEECC---CCCccchHHHHHH
Q psy15811 487 IGVNC---VRPSHVSTLVRCI 504 (581)
Q Consensus 487 iGiNC---~~p~~~~~~l~~l 504 (581)
|.+.. ..|+.+..+++.+
T Consensus 100 V~lg~~~l~~p~~~~~~~~~~ 120 (244)
T 2y88_A 100 VNVGTAALENPQWCARVIGEH 120 (244)
T ss_dssp EEECHHHHHCHHHHHHHHHHH
T ss_pred EEECchHhhChHHHHHHHHHc
Confidence 66655 2454454554444
No 325
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=42.45 E-value=19 Score=34.55 Aligned_cols=99 Identities=14% Similarity=0.210 Sum_probs=19.8
Q ss_pred HHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCC---Cc--C-----CCCCcHHHHHHHHHhhCC
Q psy15811 412 PNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDD---TH--T-----SHGELISSAVTSCLLANP 481 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~---~~--l-----~~G~~~~~~~~~l~~~~~ 481 (581)
++++.+++.|+|.+.+-|... .+...+.++.+++..-.+++++.++.. +. + ..+.+..+.++.+ ..
T Consensus 92 ~~~~~~l~~Gad~V~ig~~~l-~dp~~~~~~~~~~g~~~iv~~ld~~~~~~~~~v~~~g~~~~~~~~~~~~a~~~---~~ 167 (247)
T 3tdn_A 92 EHFLEAFLRGADKVSINTAAV-ENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEV---EK 167 (247)
T ss_dssp HHHHHHHHTTCSEECCSHHHH-HCTHHHHHHHHHHC--------------------------------------------
T ss_pred HHHHHHHHcCCCeeehhhHHh-hChHHHHHHHHHhCCCcEEEEEEeccCCCCEEEEECCCcccCCCCHHHHHHHH---Hh
Confidence 567777788999999877421 111223333333322234556666531 11 1 1123344444444 34
Q ss_pred CCceEEEECCCCCccc-----hHHHHHHHhhCCCCeEEE
Q psy15811 482 DQIQAIGVNCVRPSHV-----STLVRCIKQSHPTVQTIV 515 (581)
Q Consensus 482 ~~~~~iGiNC~~p~~~-----~~~l~~l~~~~~~~pl~~ 515 (581)
.++..|.++....... ..++++++... ++|+++
T Consensus 168 ~G~~~i~~t~~~~~g~~~g~~~~~~~~i~~~~-~iPvia 205 (247)
T 3tdn_A 168 RGAGEILLTSIDRDGTKSGYDTEMIRFVRPLT-TLPIIA 205 (247)
T ss_dssp ---------------------------------------
T ss_pred cCCCEEEEecccCCCCcCCCCHHHHHHHHHhC-CCCEEE
Confidence 4566666666433221 23455665544 467553
No 326
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=42.37 E-value=34 Score=35.69 Aligned_cols=64 Identities=11% Similarity=0.068 Sum_probs=35.9
Q ss_pred HHHHHHHCCCcEEEE-------Ec--------cCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHH
Q psy15811 157 NVEALVRAGVDYLAL-------ET--------IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL 221 (581)
Q Consensus 157 q~~~l~~~gvD~l~~-------ET--------~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~ 221 (581)
.++.+.++|+|+|.+ -| .|.+.-+..+.+++++ .++||+. +|-..+ ..++...+
T Consensus 197 ~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~-~~IPVIA------~GGI~~---~~di~kal- 265 (400)
T 3ffs_A 197 ATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASK-FGIPIIA------DGGIRY---SGDIGKAL- 265 (400)
T ss_dssp HHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTT-TTCCEEE------ESCCCS---HHHHHHHH-
T ss_pred HHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHh-cCCCEEe------cCCCCC---HHHHHHHH-
Confidence 456678899999988 11 2333333444444444 3789886 222333 34444433
Q ss_pred hhCCCCceEEEeC
Q psy15811 222 LANPDQIQAIGVN 234 (581)
Q Consensus 222 ~~~~~~~~~vGvN 234 (581)
..|+++|++-
T Consensus 266 ---alGAd~V~vG 275 (400)
T 3ffs_A 266 ---AVGASSVMIG 275 (400)
T ss_dssp ---TTTCSEEEEC
T ss_pred ---HcCCCEEEEC
Confidence 3678877764
No 327
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=42.33 E-value=1.6e+02 Score=29.91 Aligned_cols=160 Identities=8% Similarity=-0.072 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEE-----EecccCC--HHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHH
Q psy15811 403 EADLIAWHRPNVEALVRAGVDYL-----ALETIPA--EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTS 475 (581)
Q Consensus 403 ~~~~~~~~~~~~~~l~~~gvD~i-----~~ET~p~--~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~ 475 (581)
+..+.+|-+..++.+.+ .|+++ +||..-. +...+.+++.+++ .+.+|+.=+-+.| .|.+...+++.
T Consensus 111 ~~~~~~f~~~ivdal~~-~v~~vKvg~~lfea~G~~gi~~L~~~v~~lr~-~g~~VflDlK~~D-----IgnTva~ya~a 183 (353)
T 2ffc_A 111 FYFFNHFCFYIINETKE-YALAYKMNFAFYLPYGSLGVDVLKNVFDYLHH-LNVPTILDIKMND-----IGNTVKHYRKF 183 (353)
T ss_dssp HHHHHHHHHHHHHHHGG-GCSEEEEEGGGGSTTTHHHHHHHHHHHHHHHH-HTCCEEEEEEECC-----CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc-ccceeeccHHHHHhcCHHHHHHHHHHHHHHHH-cCCcEEEEEecCc-----hHHHHHHHHHH
Q ss_pred HHhhCCCCceEEEECC-CCCccchHHHHHHHhh---CCCCeEEEeeCCCCCccccccc-ccCCcCHHHHHHHHHHHH---
Q psy15811 476 CLLANPDQIQAIGVNC-VRPSHVSTLVRCIKQS---HPTVQTIVYPNKGGVWDSVHMK-WLDTEDEYSILHYVPQWL--- 547 (581)
Q Consensus 476 l~~~~~~~~~~iGiNC-~~p~~~~~~l~~l~~~---~~~~pl~~ypNag~~~~~~~~~-~~~~~~~~~~~~~~~~w~--- 547 (581)
+ ....+++++-|++ .+...|.++++..... . +.+.+.=..-...+..... .....-.+...+.+++|-
T Consensus 184 ~--~~~lgaD~vTVhp~~G~dsl~~a~~~~~~k~~~g--V~VL~lTSN~~~~dlq~~~~~~g~~v~e~V~~~A~~~g~~~ 259 (353)
T 2ffc_A 184 I--FDYLRSDSCTANIYMGTQMLRDICLDEECKRYYS--TFVLVKTTNADSHIFQNRLSLDGKEAYVVIAEEVQKMAKQL 259 (353)
T ss_dssp H--HTTSCCSEEEECCTTCSTTHHHHHBCTTSCCBCE--EEEEEECSSTTTHHHHTTCEETTEEHHHHHHHHHHHHHHHT
T ss_pred H--HHHcCCCEEEEeCCCCHHHHHHHHHHhcCCCcce--EEEehhcCCCCHHHHHHhhccCCCCHHHHHHHHHHHhCccc
Q ss_pred ----HcCCcEEeecCC-CchHHHHHHHHHHhcc
Q psy15811 548 ----EEGVNIIGGCCE-VTSYEIQQMRIMIDEF 575 (581)
Q Consensus 548 ----~~G~~iiGGCCG-t~P~hI~al~~~l~~~ 575 (581)
..|. +||--| |.|+.++.|++.+...
T Consensus 260 ~~~~~~G~--~g~VVGats~~el~~IR~~~~~~ 290 (353)
T 2ffc_A 260 HLEENGEF--VGFVVGANCYDEIKKIRELFPDC 290 (353)
T ss_dssp TTGGGTCC--EEEEECTTCHHHHHHHHHHCTTC
T ss_pred cccCCCCC--CCEEEeCCCHHHHHHHHHhCCCC
No 328
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=42.20 E-value=1.3e+02 Score=29.45 Aligned_cols=69 Identities=22% Similarity=0.258 Sum_probs=40.7
Q ss_pred HHHHHh-cCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCC-CCceEEEECCCCCc-------------cchHHHHHH
Q psy15811 440 VKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIGVNCVRPS-------------HVSTLVRCI 504 (581)
Q Consensus 440 ~~~~~~-~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~-~~~~~iGiNC~~p~-------------~~~~~l~~l 504 (581)
++.+++ .++.|+++++... ++++..+....... .++++|-+|+..|. .+..+++.+
T Consensus 89 ~~~~~~~~~~~p~~v~l~~~---------~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v 159 (311)
T 1ep3_A 89 LPWLNENFPELPIIANVAGS---------EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKAC 159 (311)
T ss_dssp HHHHHHHCTTSCEEEEECCS---------SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHH
T ss_pred HHHHHhcCCCCcEEEEEcCC---------CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHH
Confidence 334454 4588999998532 33443333322344 67888877764332 235677777
Q ss_pred HhhCCCCeEEEeeC
Q psy15811 505 KQSHPTVQTIVYPN 518 (581)
Q Consensus 505 ~~~~~~~pl~~ypN 518 (581)
+... +.|+++.-.
T Consensus 160 ~~~~-~~pv~vk~~ 172 (311)
T 1ep3_A 160 KAVS-KVPLYVKLS 172 (311)
T ss_dssp HHHC-SSCEEEEEC
T ss_pred HHhc-CCCEEEEEC
Confidence 7764 578877644
No 329
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=41.87 E-value=58 Score=31.97 Aligned_cols=124 Identities=16% Similarity=0.125 Sum_probs=66.5
Q ss_pred HHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEE
Q psy15811 410 HRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGV 489 (581)
Q Consensus 410 ~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGi 489 (581)
..+.++.|.++|+|+|= .++|+ ..-+.||-.++++....+.
T Consensus 36 ~~~~~~~l~~~GaD~iE--------------------lGiPf--------SDP~aDGpvIq~a~~rAL~----------- 76 (271)
T 3nav_A 36 SLAIMQTLIDAGADALE--------------------LGMPF--------SDPLADGPTIQGANLRALA----------- 76 (271)
T ss_dssp HHHHHHHHHHTTCSSEE--------------------EECCC--------CCGGGCCSHHHHHHHHHHH-----------
T ss_pred HHHHHHHHHHcCCCEEE--------------------ECCCC--------CCCCCCCHHHHHHHHHHHH-----------
Confidence 44667777778888773 24442 3345688888877666521
Q ss_pred CCCCCccchHHHHHHHhhCCCCeEEE--eeCC----CCC-c-----cccccc-ccCCcCHHHHHHHHHHHHHcCCcEEee
Q psy15811 490 NCVRPSHVSTLVRCIKQSHPTVQTIV--YPNK----GGV-W-----DSVHMK-WLDTEDEYSILHYVPQWLEEGVNIIGG 556 (581)
Q Consensus 490 NC~~p~~~~~~l~~l~~~~~~~pl~~--ypNa----g~~-~-----~~~~~~-~~~~~~~~~~~~~~~~w~~~G~~iiGG 556 (581)
|.+....+..++++++....++|+++ |-|. |.. + ...-.+ ......+++..++.+...+.|+..|==
T Consensus 77 ~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~l 156 (271)
T 3nav_A 77 AKTTPDICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFI 156 (271)
T ss_dssp TTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEE
T ss_pred cCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 12344556777788876522577655 6663 210 0 000011 112222334445555556667766655
Q ss_pred cCCCc-hHHHHHHHHHH
Q psy15811 557 CCEVT-SYEIQQMRIMI 572 (581)
Q Consensus 557 CCGt~-P~hI~al~~~l 572 (581)
|.-+| ++.|+++.+.-
T Consensus 157 vap~t~~eri~~i~~~~ 173 (271)
T 3nav_A 157 APPTASDETLRAVAQLG 173 (271)
T ss_dssp ECTTCCHHHHHHHHHHC
T ss_pred ECCCCCHHHHHHHHHHC
Confidence 66555 35666665543
No 330
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=41.85 E-value=91 Score=34.42 Aligned_cols=113 Identities=16% Similarity=0.128 Sum_probs=67.8
Q ss_pred CCCHH---HHHHHHHHHHHHHHhCCCCEEEeccc----------CC------------HHH---HHHHHHHHHhc--CCC
Q psy15811 400 SMTEA---DLIAWHRPNVEALVRAGVDYLALETI----------PA------------EKE---ALALVKLLREF--PGQ 449 (581)
Q Consensus 400 ~~~~~---~~~~~~~~~~~~l~~~gvD~i~~ET~----------p~------------~~E---a~a~~~~~~~~--~~~ 449 (581)
.++.+ ++.+.|.+.++...++|.|.|=+--- |. ... +..+++++|+. .+.
T Consensus 130 ~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~ 209 (671)
T 1ps9_A 130 ELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDF 209 (671)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCc
Confidence 35554 45678888888889999999854210 21 123 44555566653 368
Q ss_pred eEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECC-----CCC--------ccchHHHHHHHhhCCCCeEEE
Q psy15811 450 KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-----VRP--------SHVSTLVRCIKQSHPTVQTIV 515 (581)
Q Consensus 450 pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC-----~~p--------~~~~~~l~~l~~~~~~~pl~~ 515 (581)
|+++-++..+. ...|.++++++..+..+...+++.|.+-. ..| ......++.+++.. ++|++.
T Consensus 210 ~v~vrls~~~~--~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~iPvi~ 285 (671)
T 1ps9_A 210 IIIYRLSMLDL--VEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHV-SLPLVT 285 (671)
T ss_dssp EEEEEEEEECC--STTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSC-SSCEEE
T ss_pred eEEEEECcccc--CCCCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhc-CceEEE
Confidence 88888876542 23577777666654434445677665521 111 12346677787765 688776
No 331
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=41.79 E-value=60 Score=31.52 Aligned_cols=151 Identities=15% Similarity=0.088 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHhCCCCEE-----EecccCCHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhh
Q psy15811 407 IAWHRPNVEALVRAGVDYL-----ALETIPAEKEALALVKLLREF--PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 479 (581)
Q Consensus 407 ~~~~~~~~~~l~~~gvD~i-----~~ET~p~~~Ea~a~~~~~~~~--~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~ 479 (581)
.++-+..++.+.+ -|+++ +||... .+...+++.+.+. .+.+|+.-+-+.| .|.+...+++.+ .
T Consensus 31 ~~~~~~lv~~l~~-~v~~~Kvg~~lf~~~G--~~g~~~l~~l~~~~~~g~~VflDlK~~D-----I~nTv~~~a~~~--~ 100 (255)
T 3qw3_A 31 VEECKRLIEQTHE-YAAAYKPNAAFFEFFG--AEGWAALSEVIRAVPAGIPVVLDAKRGD-----IADTADAYATSA--F 100 (255)
T ss_dssp HHHHHHHHHHHGG-GCSEEEEBHHHHHTTT--HHHHHHHHHHHHHSCTTCCBEEEEEECC-----CHHHHHHHHHHH--H
T ss_pred HHHHHHHHHHhCC-cCcEEEEcHHHHHhcC--HHHHHHHHHHHHHhcCCCeEEEEeecCC-----cHHHHHHHHHHH--H
Confidence 4455555555543 35554 334332 1222233322221 5889988886654 456666666666 2
Q ss_pred CCCCceEEEECC-CCCccchHHHHHHHhhCCCCe-EEEeeCCCCCcccccccccCCcCHHHHHHHHHH-HHHcCCcEEee
Q psy15811 480 NPDQIQAIGVNC-VRPSHVSTLVRCIKQSHPTVQ-TIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQ-WLEEGVNIIGG 556 (581)
Q Consensus 480 ~~~~~~~iGiNC-~~p~~~~~~l~~l~~~~~~~p-l~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~-w~~~G~~iiGG 556 (581)
...+++++-|+. .+.+.+.++++. .+..+. |....|.+.. +...-+.....-.+...+.++. |.+.|. .|=
T Consensus 101 ~~lg~d~vTvh~~~G~~~l~~~~~~---~~~gv~vL~~tS~~~~~-~~q~~~~~~~~~~~~V~~~a~~~~~~~g~--~Gv 174 (255)
T 3qw3_A 101 KHLNAHAITASPYMGSDSLQPFMRY---PDKAVFVLCKTSNKGSN-DLQCLRVGDRYLYEAVAERAEGPWNVNGN--VGL 174 (255)
T ss_dssp TTSCCSEEEECCTTCHHHHHHHHTC---TTSEEEEEEECCSGGGG-TTTTSEETTEEHHHHHHHHHHTGGGGGSC--EEE
T ss_pred HHcCCCEEEEcccCCHHHHHHHHHh---hCCceEEEEeCCCccHH-HHHhcccCCCCHHHHHHHHHHHHhhhhCC--eEE
Confidence 346789999998 566666565542 111122 1123333310 0110001000012456777777 876665 666
Q ss_pred cCCCc-hHHHHHHHHHHh
Q psy15811 557 CCEVT-SYEIQQMRIMID 573 (581)
Q Consensus 557 CCGt~-P~hI~al~~~l~ 573 (581)
=||.| |++++.||+.+.
T Consensus 175 V~~at~~~e~~~ir~~~~ 192 (255)
T 3qw3_A 175 VVGATDPVALARVRARAP 192 (255)
T ss_dssp EECSSCHHHHHHHHHHCS
T ss_pred EECCCCHHHHHHHHHHCC
Confidence 77765 999999998764
No 332
>2vjq_A Formyl-coenzyme A transferase; class III COA transferase; HET: EPE; 1.8A {Oxalobacter formigenes} PDB: 2vjp_A 2vjm_A* 2vjl_A* 2vjk_A* 1p5h_A 1p5r_A* 2vjn_A* 1t4c_A* 2vjo_A* 2vjm_B* 1vgr_A* 1t3z_A* 1t4c_B* 1vgq_A*
Probab=41.68 E-value=35 Score=35.96 Aligned_cols=43 Identities=14% Similarity=0.206 Sum_probs=32.1
Q ss_pred cccCCChHHHHHHHHHHHHhccccccccccccccccHhhcCCCHHHHH
Q psy15811 35 VYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEAL 82 (581)
Q Consensus 35 ~~~l~~Pe~v~~iH~~yl~AGAdiI~TnTf~a~~~~l~~~g~~~~~~~ 82 (581)
.++|.+|+-.+.+++ |-+.|||+.+| |+ +..+.++|++.+.++
T Consensus 71 ~LDLk~~eGr~~l~~--Li~~ADVlien-fr--PGv~erlGL~ye~L~ 113 (428)
T 2vjq_A 71 ELDMKTPEGKELLEQ--MIKKADVMVEN-FG--PGALDRMGFTWEYIQ 113 (428)
T ss_dssp EECTTSHHHHHHHHH--HHHHCSEEEEC-CC--TTHHHHTTCCHHHHH
T ss_pred ecCCCCHHHHHHHHH--HHHhCCEEEeC-CC--cchHHHcCCCHHHHH
Confidence 567899987766655 45669999999 66 667889999865543
No 333
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=41.58 E-value=1.1e+02 Score=30.11 Aligned_cols=98 Identities=14% Similarity=0.130 Sum_probs=57.7
Q ss_pred HHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcC------CCcCCCCCC--HHHHHHHHHhhCC
Q psy15811 154 HRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKD------DTHTSHGEL--ISSAVTSCLLANP 225 (581)
Q Consensus 154 ~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~------~g~l~~G~~--~~~~~~~~~~~~~ 225 (581)
++.-.+.+.++|++.+=+|-- .|...-++++.+. +.||+.-+=+.+ +|...-|.+ .+++++.+.....
T Consensus 115 ~~na~rl~~eaGa~aVklEdg---~e~~~~I~al~~a-gIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~~e 190 (281)
T 1oy0_A 115 LAAATRFLKDGGAHAVKLEGG---ERVAEQIACLTAA-GIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAE 190 (281)
T ss_dssp HHHHHHHHHTTCCSEEEEEBS---GGGHHHHHHHHHH-TCCEEEEEECCC--------------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCeEEEECCc---HHHHHHHHHHHHC-CCCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHHHHHHH
Confidence 444455566799999999975 3555566666664 799884433221 233333433 3455554443446
Q ss_pred CCceEEEeCCCChhhHHHHHHHHHhhCCCCceEEe
Q psy15811 226 DQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVY 260 (581)
Q Consensus 226 ~~~~~vGvNC~~p~~~~~~l~~l~~~~~~~p~~~~ 260 (581)
.|+++|=+-|. |. ++.+.+.+. .++|++-.
T Consensus 191 AGA~~ivlE~v-p~---~~a~~it~~-l~iP~igI 220 (281)
T 1oy0_A 191 AGAFAVVMEMV-PA---ELATQITGK-LTIPTVGI 220 (281)
T ss_dssp HTCSEEEEESC-CH---HHHHHHHHH-CSSCEEEE
T ss_pred cCCcEEEEecC-CH---HHHHHHHHh-CCCCEEEe
Confidence 89999999997 43 345566654 56787753
No 334
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=41.54 E-value=49 Score=31.42 Aligned_cols=98 Identities=16% Similarity=0.231 Sum_probs=53.0
Q ss_pred HHHHHHHhCCCCEEEeccc--CCHHHHHHHHHHHHhcCCCeEEEEEEEcC-CC----cCC-----CCCcHHHHHHHHHhh
Q psy15811 412 PNVEALVRAGVDYLALETI--PAEKEALALVKLLREFPGQKAWLSFSCKD-DT----HTS-----HGELISSAVTSCLLA 479 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~--p~~~Ea~a~~~~~~~~~~~pv~iSft~~~-~~----~l~-----~G~~~~~~~~~l~~~ 479 (581)
++++.+.+.|+|.+.+=+- ++... +.++++.+..-.+.+++.++. ++ .+. ++.+..+.++.+.
T Consensus 87 ~~~~~~~~~Gad~V~lg~~~l~~p~~---~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~-- 161 (253)
T 1thf_D 87 ETASELILRGADKVSINTAAVENPSL---ITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVE-- 161 (253)
T ss_dssp HHHHHHHHTTCSEEEESHHHHHCTHH---HHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHH--
T ss_pred HHHHHHHHcCCCEEEEChHHHhChHH---HHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHH--
Confidence 5677778899999987653 33322 333333321123455666541 11 111 1235666666663
Q ss_pred CCCCceEEEECCCCCcc-----chHHHHHHHhhCCCCeEEEe
Q psy15811 480 NPDQIQAIGVNCVRPSH-----VSTLVRCIKQSHPTVQTIVY 516 (581)
Q Consensus 480 ~~~~~~~iGiNC~~p~~-----~~~~l~~l~~~~~~~pl~~y 516 (581)
..++..|.++...+.. -...+++++... ++|+++-
T Consensus 162 -~~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~~-~ipvia~ 201 (253)
T 1thf_D 162 -KRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLT-TLPIIAS 201 (253)
T ss_dssp -HTTCSEEEEEETTTTTSCSCCCHHHHHHHGGGC-CSCEEEE
T ss_pred -HCCCCEEEEEeccCCCCCCCCCHHHHHHHHHhc-CCCEEEE
Confidence 2355667776543322 256778887765 5787654
No 335
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=41.48 E-value=1.8e+02 Score=27.65 Aligned_cols=108 Identities=11% Similarity=0.066 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEecccC--------CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHH
Q psy15811 403 EADLIAWHRPNVEALVRAGVDYLALETIP--------AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVT 474 (581)
Q Consensus 403 ~~~~~~~~~~~~~~l~~~gvD~i~~ET~p--------~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~ 474 (581)
.+.+.+.+++.++...+.||. |.+|+.+ +..++..+++.+.. | .+.++++.......|.++.+.++
T Consensus 127 ~~~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~~~~l~~~v~~----~-~vg~~~D~~h~~~~g~d~~~~l~ 200 (294)
T 3vni_A 127 WERSVESVREVAKVAEACGVD-FCLEVLNRFENYLINTAQEGVDFVKQVDH----N-NVKVMLDTFHMNIEEDSIGGAIR 200 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTTCE-EEEECCCTTTCSSCCSHHHHHHHHHHHCC----T-TEEEEEEHHHHHHHCSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCE-EEEEecCcccCcccCCHHHHHHHHHHcCC----C-CEEEEEEhhhhHHcCCCHHHHHH
Confidence 355556666666666677886 6779874 45566655555532 2 24555543333445788888888
Q ss_pred HHHhhCCCCceEEEECCC-------CCccchHHHHHHHhhCCCCeEEEeeCCC
Q psy15811 475 SCLLANPDQIQAIGVNCV-------RPSHVSTLVRCIKQSHPTVQTIVYPNKG 520 (581)
Q Consensus 475 ~l~~~~~~~~~~iGiNC~-------~p~~~~~~l~~l~~~~~~~pl~~ypNag 520 (581)
.+. ..+..|=++-. +.-.+..+++.|+..+-+.++++-....
T Consensus 201 ~~~----~~i~~vHl~D~~r~~pG~G~id~~~~~~~L~~~gy~g~~~lE~~~~ 249 (294)
T 3vni_A 201 TAG----SYLGHLHTGECNRKVPGRGRIPWVEIGEALADIGYNGSVVMEPFVR 249 (294)
T ss_dssp HHG----GGEEEEEECCTTSCCTTSSSCCHHHHHHHHHHTTCCSCEEECCCCC
T ss_pred Hhh----hhEeEEEeCCCCCCCCCCCCcCHHHHHHHHHHhCCCCcEEEEeccC
Confidence 762 23333333331 2234667888888776567888876554
No 336
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=41.45 E-value=1.6e+02 Score=33.35 Aligned_cols=133 Identities=15% Similarity=0.223 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEecc-c----CCHHHHHHHHHHHHhc----CCCeEEEEEEEcCCCcCCCCCcHH-HH
Q psy15811 403 EADLIAWHRPNVEALVRAGVDYLALET-I----PAEKEALALVKLLREF----PGQKAWLSFSCKDDTHTSHGELIS-SA 472 (581)
Q Consensus 403 ~~~~~~~~~~~~~~l~~~gvD~i~~ET-~----p~~~Ea~a~~~~~~~~----~~~pv~iSft~~~~~~l~~G~~~~-~~ 472 (581)
.+.+...|.+.++.|.++|++.|-|.- . .+.....++-.+++.. .+.+++++.++- ++. +.
T Consensus 181 l~~L~~~y~~~l~~L~~aG~~~VQiDEP~L~~~l~~~~~~~~~~a~~~l~~~~~~~~i~lhtc~G---------~~~~~~ 251 (765)
T 1u1j_A 181 LPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEGQKLQAFTGAYAELESTLSGLNVLVETYFA---------DIPAEA 251 (765)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEECGGGGSCCCHHHHHHHHHHHHHSTTTTCSSEEEEECCSS---------CCCHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcCCccccCCCHHHHHHHHHHHHHHHhhcCCCeEEEEeCCC---------CcchHH
Confidence 489999999999999999999875332 1 1222333444455544 357787777653 122 45
Q ss_pred HHHHHhhCCCC-ceEEEECCCC-CccchHHHHHHHh-hCCC--CeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHH
Q psy15811 473 VTSCLLANPDQ-IQAIGVNCVR-PSHVSTLVRCIKQ-SHPT--VQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWL 547 (581)
Q Consensus 473 ~~~l~~~~~~~-~~~iGiNC~~-p~~~~~~l~~l~~-~~~~--~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~ 547 (581)
+..+ ...+ +++|++-++. +.. ++.+.. ...+ +-+++-+ . ...| ..+++...+.+.+..
T Consensus 252 ~~~l---~~l~~vd~l~lD~v~~~~~----l~~l~~~l~~~k~L~lGvVd-------g-rni~--~~d~e~v~~~l~~~~ 314 (765)
T 1u1j_A 252 YKTL---TSLKGVTAFGFDLVRGTKT----LDLVKAGFPEGKYLFAGVVD-------G-RNIW--ANDFAASLSTLQALE 314 (765)
T ss_dssp HHHH---TTCTTCCEEEEESSSCTTH----HHHHHHCCCSSCEEEEEEEC-------S-SSCB--CCCHHHHHHHHHHHH
T ss_pred HHHH---HcCCCCcEEEEEecCCccc----HHHHHHhcCCCCEEEEEeeC-------C-cccC--CCCHHHHHHHHHHHH
Confidence 5565 3556 9999999853 432 333433 1111 2233332 1 1235 345777777777665
Q ss_pred H-cCCc--EEeecCCCc
Q psy15811 548 E-EGVN--IIGGCCEVT 561 (581)
Q Consensus 548 ~-~G~~--iiGGCCGt~ 561 (581)
+ .|.. +|+=-||..
T Consensus 315 ~~lg~~~l~lspsCgL~ 331 (765)
T 1u1j_A 315 GIVGKDKLVVSTSCSLL 331 (765)
T ss_dssp HHCCSSCEEEEESSCGG
T ss_pred HhcCCCcEEEcCCCCcc
Confidence 4 4755 899999887
No 337
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=41.22 E-value=2.1e+02 Score=26.19 Aligned_cols=96 Identities=15% Similarity=0.122 Sum_probs=53.4
Q ss_pred HHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcC--CCcCCCCCcHHHHHHHHHhhCCCCceEE
Q psy15811 410 HRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKD--DTHTSHGELISSAVTSCLLANPDQIQAI 487 (581)
Q Consensus 410 ~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~--~~~l~~G~~~~~~~~~l~~~~~~~~~~i 487 (581)
..+.++.+.++|++.|.+.+ . ..++.+++.+++|++ ....++ ++.+.-+.+..++-..+ +. +++.|
T Consensus 25 ~~~~a~~~~~~Ga~~i~~~~---~----~~i~~i~~~~~~pv~-~~~~~~~~~~~~~i~~~~~~i~~~~-~~---Gad~v 92 (223)
T 1y0e_A 25 MSKMALAAYEGGAVGIRANT---K----EDILAIKETVDLPVI-GIVKRDYDHSDVFITATSKEVDELI-ES---QCEVI 92 (223)
T ss_dssp HHHHHHHHHHHTCSEEEEES---H----HHHHHHHHHCCSCEE-EECBCCCTTCCCCBSCSHHHHHHHH-HH---TCSEE
T ss_pred HHHHHHHHHHCCCeeeccCC---H----HHHHHHHHhcCCCEE-eeeccCCCccccccCCcHHHHHHHH-hC---CCCEE
Confidence 34677788889999987643 2 335566665789983 332222 33443344444433322 22 34444
Q ss_pred EECC---CCC-ccchHHHHHHHhhCCCCeEEEee
Q psy15811 488 GVNC---VRP-SHVSTLVRCIKQSHPTVQTIVYP 517 (581)
Q Consensus 488 GiNC---~~p-~~~~~~l~~l~~~~~~~pl~~yp 517 (581)
-+.. ..| ..+..+++.++...++.++++-+
T Consensus 93 ~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~ 126 (223)
T 1y0e_A 93 ALDATLQQRPKETLDELVSYIRTHAPNVEIMADI 126 (223)
T ss_dssp EEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEEC
T ss_pred EEeeecccCcccCHHHHHHHHHHhCCCceEEecC
Confidence 4444 245 45667788887763346666544
No 338
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=41.05 E-value=87 Score=28.81 Aligned_cols=72 Identities=18% Similarity=0.284 Sum_probs=44.0
Q ss_pred HHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC
Q psy15811 157 NVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 236 (581)
Q Consensus 157 q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~ 236 (581)
+++.+++.|+|.+.+... + ...++.+++. +.++++. + .++.++.... ..+++.|+++-+
T Consensus 72 ~i~~a~~~Gad~V~~~~~-~----~~~~~~~~~~-g~~~~~g--~---------~t~~e~~~a~----~~G~d~v~v~~t 130 (212)
T 2v82_A 72 QVDALARMGCQLIVTPNI-H----SEVIRRAVGY-GMTVCPG--C---------ATATEAFTAL----EAGAQALKIFPS 130 (212)
T ss_dssp HHHHHHHTTCCEEECSSC-C----HHHHHHHHHT-TCEEECE--E---------CSHHHHHHHH----HTTCSEEEETTH
T ss_pred HHHHHHHcCCCEEEeCCC-C----HHHHHHHHHc-CCCEEee--c---------CCHHHHHHHH----HCCCCEEEEecC
Confidence 688888999999986552 1 2234566665 6777654 2 2456654433 368999998654
Q ss_pred ChhhHHHHHHHHHh
Q psy15811 237 RPSHVSTLVRCIKQ 250 (581)
Q Consensus 237 ~p~~~~~~l~~l~~ 250 (581)
.+.. .+.++.+.+
T Consensus 131 ~~~g-~~~~~~l~~ 143 (212)
T 2v82_A 131 SAFG-PQYIKALKA 143 (212)
T ss_dssp HHHC-HHHHHHHHT
T ss_pred CCCC-HHHHHHHHH
Confidence 3222 355566655
No 339
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=40.99 E-value=45 Score=31.66 Aligned_cols=96 Identities=13% Similarity=0.112 Sum_probs=51.2
Q ss_pred HHHHHHHCCCcEEEEEc--cCCHHHHHHHHHHHHhcCCCcEEEEEEEcC----------CCcCCCCCCHHHHHHHHHhhC
Q psy15811 157 NVEALVRAGVDYLALET--IPAEKEALALVKLLREFPGQKAWLSFSCKD----------DTHTSHGELISSAVTSCLLAN 224 (581)
Q Consensus 157 q~~~l~~~gvD~l~~ET--~~~~~E~~aa~~a~~~~~~~pv~isft~~~----------~g~l~~G~~~~~~~~~~~~~~ 224 (581)
+++.+++.|+|.+++=+ +.+.+.+..+++.... -.+.+++++.. +..-.++.+..+.+..+.+
T Consensus 89 ~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~~~---~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~-- 163 (252)
T 1ka9_F 89 DARKLLLSGADKVSVNSAAVRRPELIRELADHFGA---QAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVE-- 163 (252)
T ss_dssp HHHHHHHHTCSEEEECHHHHHCTHHHHHHHHHHCG---GGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH--
T ss_pred HHHHHHHcCCCEEEEChHHHhCcHHHHHHHHHcCC---CcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHH--
Confidence 56777778999998865 4444445555544421 12344444421 1111123455555565543
Q ss_pred CCCceEEEeCCCChhhH-----HHHHHHHHhhCCCCceEE
Q psy15811 225 PDQIQAIGVNCVRPSHV-----STLVRCIKQSHPTVQTIV 259 (581)
Q Consensus 225 ~~~~~~vGvNC~~p~~~-----~~~l~~l~~~~~~~p~~~ 259 (581)
.++..|.++....+.+ .+.++.+++. .++|+++
T Consensus 164 -~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~-~~ipvia 201 (252)
T 1ka9_F 164 -LGAGEILLTSMDRDGTKEGYDLRLTRMVAEA-VGVPVIA 201 (252)
T ss_dssp -HTCCEEEEEETTTTTTCSCCCHHHHHHHHHH-CSSCEEE
T ss_pred -cCCCEEEEecccCCCCcCCCCHHHHHHHHHH-cCCCEEE
Confidence 5677777764322111 4677777775 5566544
No 340
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A*
Probab=40.95 E-value=53 Score=33.85 Aligned_cols=51 Identities=14% Similarity=0.227 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHCC--CcEEEEE-----ccCCHHHHHHHHHHHHhcCCCcEEEE-EEEc
Q psy15811 151 IAWHRPNVEALVRAG--VDYLALE-----TIPAEKEALALVKLLREFPGQKAWLS-FSCK 202 (581)
Q Consensus 151 ~~~~~~q~~~l~~~g--vD~l~~E-----T~~~~~E~~aa~~a~~~~~~~pv~is-ft~~ 202 (581)
.+.+.++++.|.+.| +|.|-+. ..++..+++.+++.+.+. ++||+|| +.+.
T Consensus 208 ~~~~~~~v~~l~~~g~~iDgiG~Q~H~~~~~p~~~~i~~~l~~~a~~-Gl~i~iTElDi~ 266 (378)
T 1ur1_A 208 REATVEMIERLQKRGMPIHGLGIQGHLGIDTPPIAEIEKSIIAFAKL-GLRVHFTSLDVD 266 (378)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTT-TCEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHCCCCcceEEecCcCCCCCCCHHHHHHHHHHHHhc-CCeEEEEecccC
Confidence 455667889999988 5999987 457889999999988876 8999998 5554
No 341
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=40.89 E-value=2.4e+02 Score=26.72 Aligned_cols=67 Identities=16% Similarity=0.208 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEEEccC--------CHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHH
Q psy15811 148 ADLIAWHRPNVEALVRAGVDYLALETIP--------AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTS 219 (581)
Q Consensus 148 ~~~~~~~~~q~~~l~~~gvD~l~~ET~~--------~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~ 219 (581)
+.+.+.+++.++...+.||. |.+|+.+ +..++...++.+. .| .+.++++...-...|.++.+.+..
T Consensus 128 ~~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~~~~l~~~v~----~~-~vg~~~D~~h~~~~g~d~~~~l~~ 201 (294)
T 3vni_A 128 ERSVESVREVAKVAEACGVD-FCLEVLNRFENYLINTAQEGVDFVKQVD----HN-NVKVMLDTFHMNIEEDSIGGAIRT 201 (294)
T ss_dssp HHHHHHHHHHHHHHHHTTCE-EEEECCCTTTCSSCCSHHHHHHHHHHHC----CT-TEEEEEEHHHHHHHCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCE-EEEEecCcccCcccCCHHHHHHHHHHcC----CC-CEEEEEEhhhhHHcCCCHHHHHHH
Confidence 44455555555555567996 6679874 5666666666553 22 134555533333456778777766
Q ss_pred H
Q psy15811 220 C 220 (581)
Q Consensus 220 ~ 220 (581)
+
T Consensus 202 ~ 202 (294)
T 3vni_A 202 A 202 (294)
T ss_dssp H
T ss_pred h
Confidence 5
No 342
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=40.69 E-value=2.3e+02 Score=26.40 Aligned_cols=111 Identities=15% Similarity=0.143 Sum_probs=67.9
Q ss_pred HHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECC
Q psy15811 412 PNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 491 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC 491 (581)
++++...++|+|++..-- .+ ..+.++.++ .+.|+++.+ .+++++..+. ..+++.|++
T Consensus 79 d~~~~A~~aGAd~v~~p~-~d----~~v~~~~~~-~g~~~i~G~-----------~t~~e~~~A~----~~Gad~v~~-- 135 (214)
T 1wbh_A 79 QQLAEVTEAGAQFAISPG-LT----EPLLKAATE-GTIPLIPGI-----------STVSELMLGM----DYGLKEFKF-- 135 (214)
T ss_dssp HHHHHHHHHTCSCEEESS-CC----HHHHHHHHH-SSSCEEEEE-----------SSHHHHHHHH----HTTCCEEEE--
T ss_pred HHHHHHHHcCCCEEEcCC-CC----HHHHHHHHH-hCCCEEEec-----------CCHHHHHHHH----HCCCCEEEE--
Confidence 778888889999997542 11 345555565 588888762 1366666654 246788888
Q ss_pred CCC-ccc--hHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHHHc-CCcEEeecCCCchHHH
Q psy15811 492 VRP-SHV--STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEE-GVNIIGGCCEVTSYEI 565 (581)
Q Consensus 492 ~~p-~~~--~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~~-G~~iiGGCCGt~P~hI 565 (581)
-| ..+ ...|+.++...+++|+ .|-.|-.. . .+.+|++. |+..+||--=+....|
T Consensus 136 -Fpa~~~gG~~~lk~i~~~~~~ipv--vaiGGI~~-~----------------n~~~~l~agg~~~v~gS~i~~~~~~ 193 (214)
T 1wbh_A 136 -FPAEANGGVKALQAIAGPFSQVRF--CPTGGISP-A----------------NYRDYLALKSVLCIGGSWLVPADAL 193 (214)
T ss_dssp -TTTTTTTHHHHHHHHHTTCTTCEE--EEBSSCCT-T----------------THHHHHTSTTBSCEEEGGGSCHHHH
T ss_pred -ecCccccCHHHHHHHhhhCCCCeE--EEECCCCH-H----------------HHHHHHhcCCCeEEEeccccChhhh
Confidence 33 222 5677888765435665 44444211 1 13679988 7777776555555444
No 343
>4dnh_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati YORK structural genomics research consortium; 2.50A {Sinorhizobium meliloti}
Probab=40.65 E-value=96 Score=31.34 Aligned_cols=129 Identities=17% Similarity=0.233 Sum_probs=75.7
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHhhhhcCCCcccccccccccCCCeEEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHH
Q psy15811 74 LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAW 153 (581)
Q Consensus 74 ~g~~~~~~~~i~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~~~~~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~ 153 (581)
+|++....+|++++++.-|+.+- ...|+--.|. +-+.++ ...+.+++...
T Consensus 89 MGLDW~~a~ELIrRs~aeA~~~p--------------------g~~ia~G~GT--DqL~~~--------~~~~l~~V~~A 138 (396)
T 4dnh_A 89 MGLGWPEARELIRRSLAEARGRP--------------------DALIACGAGT--DHLAPG--------PDVSIDDILAA 138 (396)
T ss_dssp TTBCHHHHHHHHHHHHHHHHTSS--------------------SCCEEEEECC--TTSCCC--------TTCCHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHhcCC--------------------CCeeeeccCc--CCCCCC--------CCCCHHHHHHH
Confidence 68887888888888876665331 1124433442 223332 23589999999
Q ss_pred HHHHHHHHHHCCCcEEEEEccCCHHHHHHH---------H-HHHHhcCCCcEEEEEEEc---C--CCcCCCCCCHHHHHH
Q psy15811 154 HRPNVEALVRAGVDYLALETIPAEKEALAL---------V-KLLREFPGQKAWLSFSCK---D--DTHTSHGELISSAVT 218 (581)
Q Consensus 154 ~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa---------~-~a~~~~~~~pv~isft~~---~--~g~l~~G~~~~~~~~ 218 (581)
|++|++..-+.|.-+|+-- +-.=++.+ - +.+++ .+.||++-.--+ + .|+- ...++.++..
T Consensus 139 Y~EQ~~~Ve~~G~~~ILMA---SRaLA~~A~~pdDY~~VY~~vL~q-~~~PVILHWLG~mFDPaL~GYW-Gs~d~~~A~~ 213 (396)
T 4dnh_A 139 YESQIEAIEAEGGRIILMA---SRALAAAAKGPEDYIRVYDRVLSQ-VKEPVIIHWLGEMFDPALEGYW-GNADHMAAMK 213 (396)
T ss_dssp HHHHHHHHHHTTCCEEECC---CHHHHHHCCSHHHHHHHHHHHHHH-CSSCEEEEEECTTTCGGGTTTT-SCSSHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEeh---hHHHHHHhCCHHHHHHHHHHHHHh-cCCCEEEEecccccChhhcccc-CCCCHHHHHH
Confidence 9999999999999999843 32211111 1 22233 478999876432 2 2332 1245666665
Q ss_pred HHHh---hCCCCceEEEeCCCC
Q psy15811 219 SCLL---ANPDQIQAIGVNCVR 237 (581)
Q Consensus 219 ~~~~---~~~~~~~~vGvNC~~ 237 (581)
.+.+ .....+++|=|.=-.
T Consensus 214 t~l~lI~~~~~kVDGIKiSLLD 235 (396)
T 4dnh_A 214 TCLDVLEAHAAKVDGIKISLLS 235 (396)
T ss_dssp HHHHHHHHTGGGEEEEEEESCC
T ss_pred HHHHHHHhChhhcCceEEeeec
Confidence 5433 334556666665443
No 344
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=40.13 E-value=1.3e+02 Score=29.03 Aligned_cols=124 Identities=13% Similarity=0.082 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECC-CCCccchHHHHHHHhhCCCC
Q psy15811 433 EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVSTLVRCIKQSHPTV 511 (581)
Q Consensus 433 ~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC-~~p~~~~~~l~~l~~~~~~~ 511 (581)
..+...+++.+++ .+.+++.=+-+.| .|.+...+++.+ ...+++.+-|++ .++..+..+++.+...+.+.
T Consensus 64 ~~~G~~~v~~Lk~-~g~~VflDlK~~D-----IpnTv~~a~~~~---~~~gaD~vTVh~~~G~~~~~~a~~~~~~~g~~~ 134 (255)
T 3ldv_A 64 TLFGPDFVRELHK-RGFSVFLDLKFHD-----IPNTCSKAVKAA---AELGVWMVNVHASGGERMMAASREILEPYGKER 134 (255)
T ss_dssp HHHHHHHHHHHHH-TTCCEEEEEEECS-----CHHHHHHHHHHH---HHTTCSEEEEEGGGCHHHHHHHHHHHGGGGGGS
T ss_pred HhhCHHHHHHHHh-cCCCEEEEEeccc-----chhHHHHHHHHH---HhcCCCEEEEeccCCHHHHHHHHHHHhhcCCCC
Confidence 3455667788887 4889988776644 356666666766 345788999999 57777777777765432123
Q ss_pred e--EEEeeCCCCCccccccccc---CCcCH-HHHHHHHHHHHHcCCcEEeecCCCchHHHHHHHHHHh
Q psy15811 512 Q--TIVYPNKGGVWDSVHMKWL---DTEDE-YSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMID 573 (581)
Q Consensus 512 p--l~~ypNag~~~~~~~~~~~---~~~~~-~~~~~~~~~w~~~G~~iiGGCCGt~P~hI~al~~~l~ 573 (581)
| +++.--.. .+. ..|. ...+. +...+.++.+.+.|+ .|==|+ |.+++.||+.+.
T Consensus 135 ~~li~VtvLTS--~s~--~~l~~~g~~~~~~~~V~~~A~~a~~aG~--~GvV~s--a~e~~~iR~~~g 194 (255)
T 3ldv_A 135 PLLIGVTVLTS--MES--ADLQGIGILSAPQDHVLRLATLTKNAGL--DGVVCS--AQEASLLKQHLG 194 (255)
T ss_dssp CEEEEECSCTT--CCH--HHHHHTTCCSCHHHHHHHHHHHHHHTTC--SEEECC--HHHHHHHHHHHC
T ss_pred ceEEEEEEEec--CCH--HHHHhcCCCCCHHHHHHHHHHHHHHcCC--CEEEEC--HHHHHHHHHhcC
Confidence 3 22322211 010 1231 12222 234556666667675 444465 678999988764
No 345
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=39.98 E-value=2.3e+02 Score=28.07 Aligned_cols=91 Identities=14% Similarity=0.118 Sum_probs=57.6
Q ss_pred HHHHHHHCCC-cEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCC
Q psy15811 157 NVEALVRAGV-DYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 235 (581)
Q Consensus 157 q~~~l~~~gv-D~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC 235 (581)
.+.+..++|. .++..+++.+.+++...++.+++..+.|+.+.+.+.+. ..-..+.+.+..+.+ .++++|-++.
T Consensus 31 la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~---~~~~~~~~~~~~~~~---~g~d~V~~~~ 104 (328)
T 2gjl_A 31 MAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPT---QKPVPYAEYRAAIIE---AGIRVVETAG 104 (328)
T ss_dssp HHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCC---SSCCCHHHHHHHHHH---TTCCEEEEEE
T ss_pred HHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecccc---ccCccHHHHHHHHHh---cCCCEEEEcC
Confidence 3455666664 55545677778888888888887667898888877521 012335666666654 5777777776
Q ss_pred CChhhHHHHHHHHHhhCCCCceE
Q psy15811 236 VRPSHVSTLVRCIKQSHPTVQTI 258 (581)
Q Consensus 236 ~~p~~~~~~l~~l~~~~~~~p~~ 258 (581)
..|. +.++.++. .++|++
T Consensus 105 g~p~---~~~~~l~~--~gi~vi 122 (328)
T 2gjl_A 105 NDPG---EHIAEFRR--HGVKVI 122 (328)
T ss_dssp SCCH---HHHHHHHH--TTCEEE
T ss_pred CCcH---HHHHHHHH--cCCCEE
Confidence 6564 44555555 245555
No 346
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=39.86 E-value=1.2e+02 Score=31.13 Aligned_cols=66 Identities=18% Similarity=0.106 Sum_probs=43.8
Q ss_pred HHHHHHHHHHCCCcEEEEEc-cCCHHHHHHHHHHHHhc-CCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEE
Q psy15811 154 HRPNVEALVRAGVDYLALET-IPAEKEALALVKLLREF-PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 231 (581)
Q Consensus 154 ~~~q~~~l~~~gvD~l~~ET-~~~~~E~~aa~~a~~~~-~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~v 231 (581)
..++++.++++|+|+|.+-| ......+...++.+|+. +++||++-- -.+++++.. +. ..|+|+|
T Consensus 101 ~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~----------V~T~e~A~~-a~---~aGaD~I 166 (361)
T 3r2g_A 101 ELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGN----------VATYAGADY-LA---SCGADII 166 (361)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEE----------ECSHHHHHH-HH---HTTCSEE
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcC----------cCCHHHHHH-HH---HcCCCEE
Confidence 56678999999999988764 33444455567777753 588998721 134555543 33 3688888
Q ss_pred Ee
Q psy15811 232 GV 233 (581)
Q Consensus 232 Gv 233 (581)
-|
T Consensus 167 ~V 168 (361)
T 3r2g_A 167 KA 168 (361)
T ss_dssp EE
T ss_pred EE
Confidence 77
No 347
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=39.77 E-value=1.4e+02 Score=32.39 Aligned_cols=125 Identities=17% Similarity=0.169 Sum_probs=70.6
Q ss_pred CceEEeccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCC-----CCEEEec---ccCC------HHHHHH
Q psy15811 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-----VDYLALE---TIPA------EKEALA 438 (581)
Q Consensus 373 ~v~VagsiGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l~~~g-----vD~i~~E---T~p~------~~Ea~a 438 (581)
+.+|.|=+--++++++||..|. .+.+.+. ++++.+.+.| +|+|=+- |=|. -+|..-
T Consensus 224 ~~~iMGIlNvTPDSFsDGG~~~------~~~~~al----~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~~vs~eEEl~R 293 (545)
T 2bmb_A 224 PTYIMAIFNATPDSFSDGGEHF------ADIESQL----NDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRR 293 (545)
T ss_dssp CCEEEEEEECSCSSTTTTTTTT------TCHHHHH----HHHHHHHHHHHTTCSCEEEEEECSCCSTTCCCCCHHHHHHH
T ss_pred CCeEEEEEeCCCCCCcCCCcCc------CCHHHHH----HHHHHHHHcCCCCCCceEEEECCCCCCCCCCCCCHHHHHHH
Confidence 4678888888889999986552 1444444 4556666678 9997554 3333 555544
Q ss_pred H---HHHHHhc--CC-CeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECCCC-CccchHHHHHHHhhCCCC
Q psy15811 439 L---VKLLREF--PG-QKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR-PSHVSTLVRCIKQSHPTV 511 (581)
Q Consensus 439 ~---~~~~~~~--~~-~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~~-p~~~~~~l~~l~~~~~~~ 511 (581)
+ ++++++. +. ..+.+|+-- .=.+++++..+ .+++ -||-++ -.....+++.++... +.
T Consensus 294 vvpvI~~i~~~~~~~~~~vpISIDT----------~~a~VaeaAl~---aGad--IINDVsg~~~d~~m~~vva~~~-~~ 357 (545)
T 2bmb_A 294 SIPLIKAIRESTELPQDKVILSIDT----------YRSNVAKEAIK---VGVD--IINDISGGLFDSNMFAVIAENP-EI 357 (545)
T ss_dssp HHHHHHHHHHCSSSCGGGEEEEEEC----------CCHHHHHHHHH---TTCC--EEEETTTTSSCTTHHHHHHTCT-TS
T ss_pred HHHHHHHHHhhccccCCCCeEEEeC----------CcHHHHHHHHH---cCCC--EEEeCCCCcCChHHHHHHHHhC-CC
Confidence 4 4555431 11 257778721 11234444422 2555 467532 222334555566652 58
Q ss_pred eEEEeeCCCCCc
Q psy15811 512 QTIVYPNKGGVW 523 (581)
Q Consensus 512 pl~~ypNag~~~ 523 (581)
|+++.-+.|.+.
T Consensus 358 ~vVlmH~rG~p~ 369 (545)
T 2bmb_A 358 CYILSHTRGDIS 369 (545)
T ss_dssp EEEEECCCSCTT
T ss_pred eEEEECCCCCCC
Confidence 999998877553
No 348
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=39.62 E-value=1.3e+02 Score=28.39 Aligned_cols=43 Identities=23% Similarity=0.257 Sum_probs=32.9
Q ss_pred HHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEE
Q psy15811 155 RPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSF 199 (581)
Q Consensus 155 ~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isf 199 (581)
.+.++.+.++|+|.+.+-+.+. .+....++.+++. +..+++.+
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~~~-~~~~~~~~~~~~~-g~~~~~~i 140 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDLPV-FHAKEFTEIAREE-GIKTVFLA 140 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTCCG-GGHHHHHHHHHHH-TCEEEEEE
T ss_pred HHHHHHHHHCCCCEEEECCCCh-hhHHHHHHHHHHh-CCCeEEEE
Confidence 5678888999999999987764 5677778888876 66666644
No 349
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=39.44 E-value=61 Score=32.28 Aligned_cols=58 Identities=19% Similarity=0.243 Sum_probs=39.1
Q ss_pred HHCCCcEEEEEccCCHHHHHHHHHHHHh-cCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeC
Q psy15811 162 VRAGVDYLALETIPAEKEALALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 234 (581)
Q Consensus 162 ~~~gvD~l~~ET~~~~~E~~aa~~a~~~-~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvN 234 (581)
.+.|+|+|.+-|+ ++++++.+++.++. .+++|+.+|=-+ +-+++. .+. ..|++.||+-
T Consensus 214 ~~aGaD~I~ld~~-~~~~l~~~v~~l~~~~~~~~I~ASGGI-------t~~ni~----~~~---~aGaD~i~vG 272 (299)
T 2jbm_A 214 AEAGADLVLLDNF-KPEELHPTATVLKAQFPSVAVEASGGI-------TLDNLP----QFC---GPHIDVISMG 272 (299)
T ss_dssp HHTTCSEEEEESC-CHHHHHHHHHHHHHHCTTSEEEEESSC-------CTTTHH----HHC---CTTCCEEECT
T ss_pred HHcCCCEEEECCC-CHHHHHHHHHHhhccCCCeeEEEECCC-------CHHHHH----HHH---HCCCCEEEEC
Confidence 3579999999996 58888888888773 456777764211 223333 222 5788999884
No 350
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=39.36 E-value=1e+02 Score=30.76 Aligned_cols=83 Identities=14% Similarity=0.053 Sum_probs=48.6
Q ss_pred HHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCC--CCHHHHHHHHHhhCCC-CceEEEe
Q psy15811 157 NVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG--ELISSAVTSCLLANPD-QIQAIGV 233 (581)
Q Consensus 157 q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G--~~~~~~~~~~~~~~~~-~~~~vGv 233 (581)
.++.+.+.|+|.+-++.-.++.|++..+ + +.++--+++ .++.| +.+.+.+..+.+.... +-..++.
T Consensus 244 ~l~~l~~~g~d~~~~d~~~dl~~~~~~~---~------~~l~Gn~dp--~~l~gt~e~i~~~v~~~l~~~g~~~g~I~~~ 312 (338)
T 2eja_A 244 FIDLAVDYRADALSVDWSVDIPELFKIY---D------KGFQGNLEP--AVLYASEEVIEEKTLGLLRRIPVKTRYVFNL 312 (338)
T ss_dssp HHHHHTTSCCSEEECCTTSCHHHHHHHC---C------SEEECCBCG--GGGGSCHHHHHHHHHHHHTTCCCSSSEEBCB
T ss_pred HHHHHHHcCCCEEEeCCCCCHHHHHHhC---C------eEEEECCCH--HHhcCCHHHHHHHHHHHHHHhCCCCCeEEeC
Confidence 4566788999999999878898876543 1 222223333 23343 3344455555442111 2367778
Q ss_pred CCC-----ChhhHHHHHHHHHh
Q psy15811 234 NCV-----RPSHVSTLVRCIKQ 250 (581)
Q Consensus 234 NC~-----~p~~~~~~l~~l~~ 250 (581)
.|+ .|+++..+++.+..
T Consensus 313 g~gi~~~~p~en~~a~v~~v~~ 334 (338)
T 2eja_A 313 GHGLAPDMELEKVKYLVDLVKS 334 (338)
T ss_dssp SSCCCTTSCHHHHHHHHHHHHT
T ss_pred CCCCCCCCCHHHHHHHHHHHHH
Confidence 885 24666666666654
No 351
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=39.28 E-value=3.2e+02 Score=27.70 Aligned_cols=246 Identities=14% Similarity=0.113 Sum_probs=122.5
Q ss_pred HHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEe
Q psy15811 154 HRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGV 233 (581)
Q Consensus 154 ~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGv 233 (581)
+++.++.-.+.|--+-.|-+ .+++-++++++++++. +.|||++++-..- ....|..+...+.
T Consensus 9 ~~~ll~~A~~~~yAV~AfNv-~n~e~~~Avl~AAee~-~sPvIlq~s~g~~-~y~~g~~~~~~v~--------------- 70 (349)
T 3elf_A 9 YAEMLGQAKQNSYAFPAINC-TSSETVNAAIKGFADA-GSDGIIQFSTGGA-EFGSGLGVKDMVT--------------- 70 (349)
T ss_dssp HHHHHHHHHHTTCCEEEEEC-CSHHHHHHHHHHHHHT-TCCEEEEECHHHH-HHHHCTTTCCHHH---------------
T ss_pred HHHHHHHHHHcCceEEEEee-CCHHHHHHHHHHHHHh-CCCEEEEcChhHH-hhcCcchhhhhhh---------------
Confidence 34455555667766655554 5788999999999986 8999999852100 0001111110000
Q ss_pred CCCChhhHHHHHHHHHhhCCCCceEEecCCCcc-ccCCCchhhhccccCcccCCCCcccccccCCChHHHHHHHHHHHHH
Q psy15811 234 NCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGVK-LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRG 312 (581)
Q Consensus 234 NC~~p~~~~~~l~~l~~~~~~~p~~~~pnag~~-~~dG~~gt~L~~~~g~~~~g~~lws~~~~~~~Pe~v~~vh~~yl~a 312 (581)
+...+...++.+.+. .++|+.+...-+.. .+| + |- +...+.-.++++.
T Consensus 71 ---g~~~~a~~v~~~A~~-~~VPVaLHlDHg~~~~ld------------------~-~~--------~~~l~~~~~~i~~ 119 (349)
T 3elf_A 71 ---GAVALAEFTHVIAAK-YPVNVALHTDHCPKDKLD------------------S-YV--------RPLLAISAQRVSK 119 (349)
T ss_dssp ---HHHHHHHHHHHHHTT-SSSCEEEEECCCCGGGGG------------------G-TH--------HHHHHHHHHHHHT
T ss_pred ---hHHHHHHHHHHHHHH-CCCCEEEECCCCCCcccc------------------h-hh--------hhhHHHHHHHHHH
Confidence 123345566666664 66888887444410 000 1 10 0011111223332
Q ss_pred HHhhcCCcccccccccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCceEEeccCCCCCCCCCCCC
Q psy15811 313 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSE 392 (581)
Q Consensus 313 iI~Tna~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~v~VagsiGP~g~~~~~g~e 392 (581)
+-...|.+...|+|. ++-++..++.+..|++|+.. .+.|=+-+|-.|.. .+|..
T Consensus 120 -----~i~~GFtSVMiDgS~--------lp~eENi~~Tk~vv~~ah~~------------gvsVEaElG~iGG~-Edgv~ 173 (349)
T 3elf_A 120 -----GGNPLFQSHMWDGSA--------VPIDENLAIAQELLKAAAAA------------KIILEIEIGVVGGE-EDGVA 173 (349)
T ss_dssp -----TCCCSCSEEEECCTT--------SCHHHHHHHHHHHHHHHHHT------------TCEEEEEESCCBC-------
T ss_pred -----HhhcCCCEEEecCCC--------CCHHHHHHHHHHHHHHHHHc------------CCeEEEEeeccccc-cCCcc
Confidence 122234455556554 33455545556666655543 26676667766521 11111
Q ss_pred C---CCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec--cc-----C-----CHHHHHHHHHHHHh-c------CCCe
Q psy15811 393 Y---SGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE--TI-----P-----AEKEALALVKLLRE-F------PGQK 450 (581)
Q Consensus 393 Y---~g~y~~~~~~~~~~~~~~~~~~~l~~~gvD~i~~E--T~-----p-----~~~Ea~a~~~~~~~-~------~~~p 450 (581)
. ..-| +++++..+|+++.- ....|||.|.+- |. | +..-++.+-+++++ + .++|
T Consensus 174 ~~~~~~~y---T~Peea~~Fv~~tg--~~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~I~~~v~~~~~~~~~~~~vp 248 (349)
T 3elf_A 174 NEINEKLY---TSPEDFEKTIEALG--AGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQQVAAAKLGLPADAKPFD 248 (349)
T ss_dssp -------C---CCHHHHHHHHHHHT--TSTTSCEEEEECSSCBSSCCCTTSSCCCTHHHHHHHHHHHHHHTCCTTCCCCC
T ss_pred cccccccC---CCHHHHHHHHHHhC--CCCCCceEEEEecCCcccCCCCCCCccCHHHHHHHHHHHHhhcCCccccCCCc
Confidence 0 0112 57888888766541 001249998763 32 1 13334444444431 1 1466
Q ss_pred EEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECC
Q psy15811 451 AWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 491 (581)
Q Consensus 451 v~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC 491 (581)
.++|= .+|.+-++.-+.+ ..++.=|.|+.
T Consensus 249 LVlHG--------gSG~p~e~i~~ai----~~GV~KiNi~T 277 (349)
T 3elf_A 249 FVFHG--------GSGSLKSEIEEAL----RYGVVKMNVDT 277 (349)
T ss_dssp EEECC--------CTTCCHHHHHHHH----HTTEEEEEECH
T ss_pred EEEeC--------CCCCCHHHHHHHH----HcCCEEEEcch
Confidence 66543 3578888777766 23555555655
No 352
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=39.01 E-value=3e+02 Score=27.35 Aligned_cols=142 Identities=15% Similarity=0.158 Sum_probs=75.9
Q ss_pred ceEEeccCCCC---CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEE--ecccCC-------HHHHHHHHH
Q psy15811 374 SQTAASIGPYG---TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA--LETIPA-------EKEALALVK 441 (581)
Q Consensus 374 v~VagsiGP~g---~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l~~~gvD~i~--~ET~p~-------~~Ea~a~~~ 441 (581)
..|.||++|.| +.++.-+.+++ .+. +..++.|+|.+- +=..+. +.++..+++
T Consensus 107 ~tv~gs~~~ggl~g~~~~~d~~~~~-----~sV-----------e~AvrlGADaV~~l~~i~~Gs~~e~~~l~~la~vv~ 170 (307)
T 3fok_A 107 KIVVGSMNRGGLRGASFEMDDRYTG-----YNV-----------SSMVDRGVDFAKTLVRINLSDAGTAPTLEATAHAVN 170 (307)
T ss_dssp CEEEEECCCCSCTTCTTTTSCCCCS-----CCH-----------HHHHHHTCCEEEEEEEECTTCTTHHHHHHHHHHHHH
T ss_pred cccccccCccccccCCCCccccccc-----cCH-----------HHHHHCCCCEEEEEEEECCCChhHHHHHHHHHHHHH
Confidence 35779999953 33333333333 122 233345899954 322222 444444444
Q ss_pred HHHhcCCCeEEEE-EEEcC-CCcCCCCCcHHHHHHHHHhhCCCCce----EEEECCCCCccchHHHHHHHhhCCCCeEEE
Q psy15811 442 LLREFPGQKAWLS-FSCKD-DTHTSHGELISSAVTSCLLANPDQIQ----AIGVNCVRPSHVSTLVRCIKQSHPTVQTIV 515 (581)
Q Consensus 442 ~~~~~~~~pv~iS-ft~~~-~~~l~~G~~~~~~~~~l~~~~~~~~~----~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~ 515 (581)
..++ .++|+++- |.... +++..+-.+.+-+.....-....+++ .|=++.+ +. ++++.... ++|+++
T Consensus 171 ea~~-~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaELGADs~~tivK~~y~--e~----f~~Vv~a~-~vPVVi 242 (307)
T 3fok_A 171 EAAA-AQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGLGNDSSYTWMKLPVV--EE----MERVMEST-TMPTLL 242 (307)
T ss_dssp HHHH-TTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTCSSCCSSEEEEEECC--TT----HHHHGGGC-SSCEEE
T ss_pred HHHH-cCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHhCCCcCCCEEEeCCc--HH----HHHHHHhC-CCCEEE
Confidence 5555 59999886 33332 44433334554444443323456777 8888875 22 35555555 588777
Q ss_pred eeCCCCCcccccccccCCcCHHHHHHHHHHHHH-cCC
Q psy15811 516 YPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLE-EGV 551 (581)
Q Consensus 516 ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~-~G~ 551 (581)
- .|+. ..++++|.+.+++-++ .|+
T Consensus 243 a--GG~k----------~~~~~e~L~~v~~A~~~aGa 267 (307)
T 3fok_A 243 L--GGEG----------GNDPDATFASWEHALTLPGV 267 (307)
T ss_dssp E--CCSC----------C--CHHHHHHHHHHTTSTTE
T ss_pred e--CCCC----------CCCHHHHHHHHHHHHHhCCC
Confidence 5 2211 1124577777777777 576
No 353
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=38.89 E-value=1.7e+02 Score=28.81 Aligned_cols=209 Identities=13% Similarity=0.120 Sum_probs=108.3
Q ss_pred HHHHHHHHhhCCCCceEEEeCCCChhhHHHHHHHHHhhCCCCceEEecCCC-ccccCC-----CchhhhccccCcccC--
Q psy15811 214 SSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG-VKLLDG-----SFTSQVSRHTIKDVD-- 285 (581)
Q Consensus 214 ~~~~~~~~~~~~~~~~~vGvNC~~p~~~~~~l~~l~~~~~~~p~~~~pnag-~~~~dG-----~~gt~L~~~~g~~~~-- 285 (581)
.+.+..+.+ .+=..-.+||...+.+..+++..... +.|++++-..| .... | .+...+.+.++.++-
T Consensus 7 ~~ll~~A~~---~~yAv~AfNv~n~e~~~avl~AAe~~--~sPvIlq~s~~~~~y~-g~~~~~~~v~~~a~~~~VPValH 80 (286)
T 1gvf_A 7 KYLLQDAQA---NGYAVPAFNIHNAETIQAILEVCSEM--RSPVILAGTPGTFKHI-ALEEIYALCSAYSTTYNMPLALH 80 (286)
T ss_dssp HHHHHHHHH---HTCCEEEEECCSHHHHHHHHHHHHHH--TCCCEEEECTTHHHHS-CHHHHHHHHHHHHHHTTSCBEEE
T ss_pred HHHHHHHHH---CCCEEEEEeeCCHHHHHHHHHHHHHh--CCCEEEECChhHHhhc-CHHHHHHHHHHHHHhCCCcEEEE
Confidence 445554443 23234568998888888888888873 66888887766 3222 2 123333333233210
Q ss_pred -CCCcccccccCCChHHHHHHHHHHHHHHHhhcCCcccccccccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHhh
Q psy15811 286 -GHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDY 364 (581)
Q Consensus 286 -g~~lws~~~~~~~Pe~v~~vh~~yl~aiI~Tna~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~av~lA~~A~~~~ 364 (581)
.+ ..+.|.+.+. +++ +|.+...|+|. ++-++..++.+..|++|+..
T Consensus 81 lDH--------g~~~e~i~~a----i~~---------GFtSVMiDgS~--------lp~eeNi~~Tk~vv~~ah~~---- 127 (286)
T 1gvf_A 81 LDH--------HESLDDIRRK----VHA---------GVRSAMIDGSH--------FPFAENVKLVKSVVDFCHSQ---- 127 (286)
T ss_dssp EEE--------ECCHHHHHHH----HHT---------TCCEEEECCTT--------SCHHHHHHHHHHHHHHHHHT----
T ss_pred cCC--------CCCHHHHHHH----HHc---------CCCeEEECCCC--------CCHHHHHHHHHHHHHHHHHc----
Confidence 01 1234444332 222 34455556564 33555556666666666653
Q ss_pred hhhcCCCCCceEEeccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec--cc-------CCHHH
Q psy15811 365 LALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALE--TI-------PAEKE 435 (581)
Q Consensus 365 ~~~~~~~~~v~VagsiGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l~~~gvD~i~~E--T~-------p~~~E 435 (581)
.+.|=+-+|-.|.. .+|..-...-..-+++++..+|+++ .|||.|.+- |. |.+ +
T Consensus 128 --------gvsVEaElG~vgg~-ed~~~~~~~~~~~T~Peea~~Fv~~-------TgvD~LAvaiGt~HG~Y~~~p~L-d 190 (286)
T 1gvf_A 128 --------DCSVEAELGRLGGV-EDDMSVDAESAFLTDPQEAKRFVEL-------TGVDSLAVAIGTAHGLYSKTPKI-D 190 (286)
T ss_dssp --------TCEEEEEESCCC------------CCSSCCHHHHHHHHHH-------HCCSEEEECSSCCSSCCSSCCCC-C
T ss_pred --------CCEEEEEEeeccCc-ccCcccccccccCCCHHHHHHHHHH-------HCCCEEEeecCccccCcCCCCcc-C
Confidence 26776677776531 1111000000012578887777763 599998754 32 221 1
Q ss_pred HHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECC
Q psy15811 436 ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 491 (581)
Q Consensus 436 a~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC 491 (581)
-..++.+++..++|.++|= .+|.+-++.-+.+ ..++.=|.|+-
T Consensus 191 -~~~L~~I~~~~~vpLVlHG--------gSG~~~e~i~~ai----~~Gv~KiNi~T 233 (286)
T 1gvf_A 191 -FQRLAEIREVVDVPLVLHG--------ASDVPDEFVRRTI----ELGVTKVNVAT 233 (286)
T ss_dssp -HHHHHHHHHHCCSCEEECC--------CTTCCHHHHHHHH----HTTEEEEEECH
T ss_pred -HHHHHHHHHhcCCCEEEEC--------CCCCCHHHHHHHH----HCCCeEEEECh
Confidence 1234455554678876553 3577777776665 23555555554
No 354
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=38.85 E-value=2.5e+02 Score=26.41 Aligned_cols=100 Identities=14% Similarity=0.205 Sum_probs=62.0
Q ss_pred HHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCC------eEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCce
Q psy15811 412 PNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQ------KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ 485 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~------pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~ 485 (581)
++++...++|+|||+- |... ..+++..++ .++ |++..+ .+++++..++ ..+++
T Consensus 76 ~~a~~ai~AGA~fivs---P~~~--~evi~~~~~-~~v~~~~~~~~~PG~-----------~TptE~~~A~----~~Gad 134 (217)
T 3lab_A 76 DDFQKAIDAGAQFIVS---PGLT--PELIEKAKQ-VKLDGQWQGVFLPGV-----------ATASEVMIAA----QAGIT 134 (217)
T ss_dssp HHHHHHHHHTCSEEEE---SSCC--HHHHHHHHH-HHHHCSCCCEEEEEE-----------CSHHHHHHHH----HTTCC
T ss_pred HHHHHHHHcCCCEEEe---CCCc--HHHHHHHHH-cCCCccCCCeEeCCC-----------CCHHHHHHHH----HcCCC
Confidence 7888899999999986 4432 234455555 367 888654 3577777766 23556
Q ss_pred EEEECCCCCcc-c--hHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHHHcCCcEE
Q psy15811 486 AIGVNCVRPSH-V--STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNII 554 (581)
Q Consensus 486 ~iGiNC~~p~~-~--~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~~G~~ii 554 (581)
.|.+ -|.. + ...||.++.-.+++|+ .|-.|-.. +.+.+|++.|+.++
T Consensus 135 ~vK~---FPa~~~gG~~~lkal~~p~p~i~~--~ptGGI~~-----------------~N~~~~l~aGa~~~ 184 (217)
T 3lab_A 135 QLKC---FPASAIGGAKLLKAWSGPFPDIQF--CPTGGISK-----------------DNYKEYLGLPNVIC 184 (217)
T ss_dssp EEEE---TTTTTTTHHHHHHHHHTTCTTCEE--EEBSSCCT-----------------TTHHHHHHSTTBCC
T ss_pred EEEE---CccccccCHHHHHHHHhhhcCceE--EEeCCCCH-----------------HHHHHHHHCCCEEE
Confidence 6665 3433 3 4778888765434554 46555221 12478999996443
No 355
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=38.79 E-value=95 Score=29.96 Aligned_cols=89 Identities=9% Similarity=0.164 Sum_probs=58.9
Q ss_pred HHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCC---------CcCCCCCCHHHHHHHHHhhCCCCceEE
Q psy15811 161 LVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDD---------THTSHGELISSAVTSCLLANPDQIQAI 231 (581)
Q Consensus 161 l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~---------g~l~~G~~~~~~~~~~~~~~~~~~~~v 231 (581)
+.+-... |-+--+|....+....+.+++. +..|++.+-.++. +.+..|.+.++....+......-+.++
T Consensus 23 i~~Lp~p-vT~Ai~P~~p~~~~~a~~A~~~-G~EvllHlPMep~~~~~~~~gp~~L~~~~s~~ei~~~l~~al~~vP~a~ 100 (245)
T 2nly_A 23 FLTGEIP-VTVAVMPFLEHSTKQAEIAQAA-GLEVIVHMPLEPKKGKISWLGPSGITSNLSVGEVKSRVRKAFDDIPYAV 100 (245)
T ss_dssp HHTCSSC-EEEEECSSSTTHHHHHHHHHHT-TCEEEEEEEECCC--------CCCBCTTCCHHHHHHHHHHHHHHSTTCC
T ss_pred HHcCCCC-eEEEECCCCCCHHHHHHHHHHC-CCEEEEEcCCCCCCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHCCCcE
Confidence 4443333 3445556666666677777764 7889998876532 345567777777666655444557799
Q ss_pred EeCC-------CChhhHHHHHHHHHhh
Q psy15811 232 GVNC-------VRPSHVSTLVRCIKQS 251 (581)
Q Consensus 232 GvNC-------~~p~~~~~~l~~l~~~ 251 (581)
|+|- +....|..+++.+++.
T Consensus 101 GvnNHmGS~~T~~~~~m~~vm~~l~~~ 127 (245)
T 2nly_A 101 GLNNHMGSKIVENEKIMRAILEVVKEK 127 (245)
T ss_dssp EEEEEECTTGGGCHHHHHHHHHHHHHT
T ss_pred EEecccccchhcCHHHHHHHHHHHHHC
Confidence 9995 3577888898988874
No 356
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=38.64 E-value=67 Score=30.08 Aligned_cols=99 Identities=18% Similarity=0.192 Sum_probs=52.4
Q ss_pred HHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCC-eEEEEEEEcCC-C----cCCCC-----CcHHHHHHHHHhhC
Q psy15811 412 PNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDD-T----HTSHG-----ELISSAVTSCLLAN 480 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~-pv~iSft~~~~-~----~l~~G-----~~~~~~~~~l~~~~ 480 (581)
++++.+.++|+|++.+-+-. +.+...+.++.+.+ +. .+.+++.++.+ + .+..| .+..+.++.+.+.
T Consensus 90 ~~~~~~~~~Gad~V~i~~~~-~~~~~~~~~~~~~~-g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~- 166 (253)
T 1h5y_A 90 EDATTLFRAGADKVSVNTAA-VRNPQLVALLAREF-GSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEEL- 166 (253)
T ss_dssp HHHHHHHHHTCSEEEESHHH-HHCTHHHHHHHHHH-CGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHH-
T ss_pred HHHHHHHHcCCCEEEEChHH-hhCcHHHHHHHHHc-CCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhC-
Confidence 45566777899999976532 22222333444442 32 25556555421 1 11112 3555656665333
Q ss_pred CCCceEEEECCCCCcc-----chHHHHHHHhhCCCCeEEEe
Q psy15811 481 PDQIQAIGVNCVRPSH-----VSTLVRCIKQSHPTVQTIVY 516 (581)
Q Consensus 481 ~~~~~~iGiNC~~p~~-----~~~~l~~l~~~~~~~pl~~y 516 (581)
+++.|.++...+.. -...+++++... ++|+++-
T Consensus 167 --G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~~-~~pvia~ 204 (253)
T 1h5y_A 167 --GAGEILLTSIDRDGTGLGYDVELIRRVADSV-RIPVIAS 204 (253)
T ss_dssp --TCSEEEEEETTTTTTCSCCCHHHHHHHHHHC-SSCEEEE
T ss_pred --CCCEEEEecccCCCCcCcCCHHHHHHHHHhc-CCCEEEe
Confidence 56777877644321 345677777765 5776543
No 357
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=38.64 E-value=3e+02 Score=27.13 Aligned_cols=164 Identities=11% Similarity=0.081 Sum_probs=0.0
Q ss_pred HhccccccccccccccccHhhcCCCHHH----HHHHHHHHHHHHHHHhhhhcCCCcccccccccccCCCeEEEeecCCcC
Q psy15811 53 RAGADIIQSSCYQANVDNLTKLGYSEQE----ALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128 (581)
Q Consensus 53 ~AGAdiI~TnTf~a~~~~l~~~g~~~~~----~~~i~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~~~~~VagsiGP~g 128 (581)
+.|+|+|.+. |..+++-.|...-. ...-|.--+++++|+.-..+. -..+|| +.++.
T Consensus 46 ~gGaDlii~y----nsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v~~---------------iPV~Ag-v~~~D 105 (286)
T 2p10_A 46 AGDIDLIVIY----NSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVRH---------------TPVLAG-VNGTD 105 (286)
T ss_dssp HTTCSEEEEC----HHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCSS---------------SCEEEE-ECTTC
T ss_pred hCCCCEEEEe----ccchhhhcCccchhhhccccCHHHHHHHHHHhhhccCCC---------------CCEEEE-ECCcC
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEEEccC------------------CHHHHHHHHHHHHhc
Q psy15811 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP------------------AEKEALALVKLLREF 190 (581)
Q Consensus 129 ~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~ET~~------------------~~~E~~aa~~a~~~~ 190 (581)
.+.. .-..++.|.+.|+.-+ =-+| .+.+....++.+++.
T Consensus 106 P~~~---------------------~g~~Le~lk~~Gf~Gv--~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~ 162 (286)
T 2p10_A 106 PFMV---------------------MSTFLRELKEIGFAGV--QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKL 162 (286)
T ss_dssp TTCC---------------------HHHHHHHHHHHTCCEE--EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHT
T ss_pred CCcC---------------------HHHHHHHHHHhCCceE--EECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHC
Q ss_pred CCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC---------C--------hhhHHHHHHHHHhhCC
Q psy15811 191 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV---------R--------PSHVSTLVRCIKQSHP 253 (581)
Q Consensus 191 ~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~---------~--------p~~~~~~l~~l~~~~~ 253 (581)
++ .|+.|..+ ++++...+. .+||.|-+++. + |+.+.++.+..+...+
T Consensus 163 -gL---~Ti~~v~~--------~eeA~amA~----agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnp 226 (286)
T 2p10_A 163 -DL---LTTPYVFS--------PEDAVAMAK----AGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRD 226 (286)
T ss_dssp -TC---EECCEECS--------HHHHHHHHH----HTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCS
T ss_pred -CC---eEEEecCC--------HHHHHHHHH----cCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCC
Q ss_pred CCceEEecCCCccccCCCchhhhccccCcccCCCCcccccccCCChHHHHHHHH
Q psy15811 254 TVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307 (581)
Q Consensus 254 ~~p~~~~pnag~~~~dG~~gt~L~~~~g~~~~g~~lws~~~~~~~Pe~v~~vh~ 307 (581)
++-++++ ++| +++||.++.+.+
T Consensus 227 dvivLc~-------------------------gGp-------IstpeDv~~~l~ 248 (286)
T 2p10_A 227 DIIILSH-------------------------GGP-------IANPEDARFILD 248 (286)
T ss_dssp CCEEEEE-------------------------STT-------CCSHHHHHHHHH
T ss_pred CcEEEec-------------------------CCC-------CCCHHHHHHHHh
No 358
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=38.35 E-value=1.8e+02 Score=30.02 Aligned_cols=86 Identities=9% Similarity=0.116 Sum_probs=48.4
Q ss_pred HHHHHCCCcEEEEEccCCHHHHHHHHHHHHhc-CCCcEEEEEEEcCC-----------C--cCCCCCCHHHHHHHHHhhC
Q psy15811 159 EALVRAGVDYLALETIPAEKEALALVKLLREF-PGQKAWLSFSCKDD-----------T--HTSHGELISSAVTSCLLAN 224 (581)
Q Consensus 159 ~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~-~~~pv~isft~~~~-----------g--~l~~G~~~~~~~~~~~~~~ 224 (581)
+..++.|++.+ |+.+.+|+..+.+.+++. ...+|++ -++.+ | ..+.|.+++++...+....
T Consensus 118 ~~a~~~gv~~i---~vds~~el~~l~~~a~~~~~~~~v~l--rvn~g~~~~~~~~~~tg~~~sRfG~~~~e~~~l~~~~~ 192 (425)
T 2qgh_A 118 EQALKLNILFL---NVESFMELKTIETIAQSLGIKARISI--RINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAK 192 (425)
T ss_dssp HHHHHTTCSEE---EECSHHHHHHHHHHHHHHTCCEEEEE--EBCCCCCCCSCGGGBCCSTTSSSSBCHHHHHHHHHHHH
T ss_pred HHHHHCCCCEE---EeCCHHHHHHHHHHHHhcCCCceEEE--EEeCCCCCCCCcccccCCCCCCCcCCHHHHHHHHHHHH
Confidence 34456788755 556677777776666543 2345555 44432 2 4567888876654332211
Q ss_pred -CCCceEEEeCCC------ChhhHHHHHHHHH
Q psy15811 225 -PDQIQAIGVNCV------RPSHVSTLVRCIK 249 (581)
Q Consensus 225 -~~~~~~vGvNC~------~p~~~~~~l~~l~ 249 (581)
..++...|+-|. .++...+.++.+.
T Consensus 193 ~~~~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~ 224 (425)
T 2qgh_A 193 KSAFLEPVSVHFHIGSQLLDLEPIIEASQKVA 224 (425)
T ss_dssp HCSSEEEEEEECCCBSSBCCHHHHHHHHHHHH
T ss_pred hCCCccEEEEEEECCCCCCCHHHHHHHHHHHH
Confidence 346777887774 2444444444444
No 359
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=38.22 E-value=1.3e+02 Score=28.28 Aligned_cols=138 Identities=10% Similarity=0.048 Sum_probs=74.3
Q ss_pred HHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCC-eEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEEC
Q psy15811 412 PNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~-pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiN 490 (581)
..++.+. ..++++=+-+---..+....++.+++..+. +++.=+-+.| -|.+...+++.+ ... +.+-++
T Consensus 17 ~l~~~l~-~~v~~~KvG~~l~~~~G~~~v~~L~~~~~~~~VflDlK~~D-----I~nTv~~~~~~~---~~~--d~vTVh 85 (222)
T 4dbe_A 17 QVLKEME-NELYGIKVGLPLVLDLGVDKTRELLIGLDVEEIIVDFKLAD-----IGYIMKSIVERL---SFA--NSFIAH 85 (222)
T ss_dssp HHHHHHG-GGCSEEEEEHHHHHHHCHHHHHHHHHTCCCSEEEEEEEECS-----CHHHHHHHHTTC---TTC--SEEEEE
T ss_pred HHHHHhC-CcCcEEEECHHHHHhhCHHHHHHHHHhcCCCeEEEEeeecc-----hHHHHHHHHHHH---HhC--CEEEEE
Confidence 3344443 346654222211134455677777763488 8888887655 344455555444 222 888999
Q ss_pred C-CC-CccchHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHHHcCCcEEeecCC-CchHHHHH
Q psy15811 491 C-VR-PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCE-VTSYEIQQ 567 (581)
Q Consensus 491 C-~~-p~~~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~~G~~iiGGCCG-t~P~hI~a 567 (581)
+ .+ ++.+..+++.....+..+.+...=+. .+|... ....+++.+++| |+. |==|+ |.|+.++.
T Consensus 86 ~~~G~~~~~~~a~~~~~~~~~~v~vLts~s~--------~~~~~~-~~~~~a~~a~~~---g~~--GvV~sat~p~e~~~ 151 (222)
T 4dbe_A 86 SFIGVKGSLDELKRYLDANSKNLYLVAVMSH--------EGWSTL-FADYIKNVIREI---SPK--GIVVGGTKLDHITQ 151 (222)
T ss_dssp STTCTTTTHHHHHHHHHHTTCEEEEEEECSS--------TTCCCT-THHHHHHHHHHH---CCS--EEEECTTCHHHHHH
T ss_pred cCcCcHHHHHHHHHHHHhcCCcEEEEEeCCC--------cchHHH-HHHHHHHHHHHh---CCC--EEEECCCCHHHHHH
Confidence 9 56 67777777777654311211111111 112111 123566666666 543 33344 67999999
Q ss_pred HHHHHhc
Q psy15811 568 MRIMIDE 574 (581)
Q Consensus 568 l~~~l~~ 574 (581)
|++.+..
T Consensus 152 ir~~~~~ 158 (222)
T 4dbe_A 152 YRRDFEK 158 (222)
T ss_dssp HHHHCTT
T ss_pred HHHhCCC
Confidence 9987653
No 360
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=38.14 E-value=1.4e+02 Score=27.97 Aligned_cols=94 Identities=14% Similarity=0.079 Sum_probs=52.2
Q ss_pred HHHHHHHCCCcEEEEEcc--CCHHHHHHHHHHHHhcCCCcEEEEEEEcC-----CC-cCCCCCCHHHHHHHHHhhCCCCc
Q psy15811 157 NVEALVRAGVDYLALETI--PAEKEALALVKLLREFPGQKAWLSFSCKD-----DT-HTSHGELISSAVTSCLLANPDQI 228 (581)
Q Consensus 157 q~~~l~~~gvD~l~~ET~--~~~~E~~aa~~a~~~~~~~pv~isft~~~-----~g-~l~~G~~~~~~~~~~~~~~~~~~ 228 (581)
+++.+++.|+|.+++=+. .+.+. ..++ +++. ..+++++++.. .| .-.++.+..+.+..+. ..++
T Consensus 87 ~~~~~~~~Gad~V~lg~~~l~~p~~---~~~~-~~~g-~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~---~~G~ 158 (241)
T 1qo2_A 87 YAEKLRKLGYRRQIVSSKVLEDPSF---LKSL-REID-VEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLK---EYGL 158 (241)
T ss_dssp HHHHHHHTTCCEEEECHHHHHCTTH---HHHH-HTTT-CEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHH---TTTC
T ss_pred HHHHHHHCCCCEEEECchHhhChHH---HHHH-HHcC-CcEEEEEEecCCEEEECCceecCCCCHHHHHHHHH---hCCC
Confidence 455666789999987553 22222 2233 4442 34666666641 11 1123346777666654 4778
Q ss_pred eEEEeCCCChhhH-----HHHHHHHHhhCCCCceEE
Q psy15811 229 QAIGVNCVRPSHV-----STLVRCIKQSHPTVQTIV 259 (581)
Q Consensus 229 ~~vGvNC~~p~~~-----~~~l~~l~~~~~~~p~~~ 259 (581)
..|.++-...+.+ .++++.+.+. .++|+++
T Consensus 159 ~~i~~t~~~~~g~~~g~~~~~i~~l~~~-~~iPvia 193 (241)
T 1qo2_A 159 EEIVHTEIEKDGTLQEHDFSLTKKIAIE-AEVKVLA 193 (241)
T ss_dssp CEEEEEETTHHHHTCCCCHHHHHHHHHH-HTCEEEE
T ss_pred CEEEEEeecccccCCcCCHHHHHHHHHh-cCCcEEE
Confidence 8888876433222 4667777764 4566654
No 361
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=38.08 E-value=92 Score=30.93 Aligned_cols=87 Identities=17% Similarity=0.049 Sum_probs=47.7
Q ss_pred HHHHHCCCcEEEEE-ccC------CHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCC---HHHHHHHHHhhCCCCc
Q psy15811 159 EALVRAGVDYLALE-TIP------AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGEL---ISSAVTSCLLANPDQI 228 (581)
Q Consensus 159 ~~l~~~gvD~l~~E-T~~------~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~---~~~~~~~~~~~~~~~~ 228 (581)
+..++.|+|.+.+= ++. .++|+..+++.+++. ++|+++- +. .+.++ +.+ +..++..+. ..|+
T Consensus 132 e~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~-GlpvIie-~~-~G~~~--~~d~e~i~~aariA~---elGA 203 (295)
T 3glc_A 132 DDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKV-GMPTMAV-TG-VGKDM--VRDQRYFSLATRIAA---EMGA 203 (295)
T ss_dssp HHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTT-TCCEEEE-EC-C------CCSHHHHHHHHHHHH---HTTC
T ss_pred HHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHc-CCEEEEE-CC-CCCcc--CCCHHHHHHHHHHHH---HhCC
Confidence 34457899988653 222 244455666666664 7998874 32 22222 233 233333333 5899
Q ss_pred eEEEeCCCChhhHHHHHHHHHhhCCCCceEE
Q psy15811 229 QAIGVNCVRPSHVSTLVRCIKQSHPTVQTIV 259 (581)
Q Consensus 229 ~~vGvNC~~p~~~~~~l~~l~~~~~~~p~~~ 259 (581)
|.|.++-+ ++.+ +++... ..+|+++
T Consensus 204 D~VKt~~t-~e~~----~~vv~~-~~vPVv~ 228 (295)
T 3glc_A 204 QIIKTYYV-EKGF----ERIVAG-CPVPIVI 228 (295)
T ss_dssp SEEEEECC-TTTH----HHHHHT-CSSCEEE
T ss_pred CEEEeCCC-HHHH----HHHHHh-CCCcEEE
Confidence 99999976 3443 444443 4566653
No 362
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=37.93 E-value=2.9e+02 Score=26.81 Aligned_cols=119 Identities=14% Similarity=0.071 Sum_probs=61.1
Q ss_pred CeEEEe-ecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEEEccCC----HHHHHHHHHHHHhcC
Q psy15811 117 HIETAA-SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPA----EKEALALVKLLREFP 191 (581)
Q Consensus 117 ~~~Vag-siGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~ET~~~----~~E~~aa~~a~~~~~ 191 (581)
+..|.| -+=++.++++++..| .+.+++.+ +++.+++.|+|+|=+=.-++ .+.+..+++++++..
T Consensus 9 ~~~iigEilN~Tpdsf~dg~~~-------~~~~~a~~----~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~ 77 (271)
T 2yci_X 9 MFIMIGERINGMFKDIREAILN-------KDPRPIQE----WARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVV 77 (271)
T ss_dssp CCEEEEEEEETTSHHHHHHHHT-------TCCHHHHH----HHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEecCCChhhHHHhhhh-------CCHHHHHH----HHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhC
Confidence 444555 444555554443221 23355544 44555679999975544332 555666667776544
Q ss_pred CCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEE-eCCCChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 192 GQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIG-VNCVRPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 192 ~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vG-vNC~~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
++|+.| + ....+ +++++.+.. .|++.|- +|-. .+.+...+..+.++ +.|+++++.
T Consensus 78 ~~pisI----D-------T~~~~-v~~aal~a~-~Ga~iINdvs~~-~d~~~~~~~~~a~~--~~~vv~m~~ 133 (271)
T 2yci_X 78 DLPCCL----D-------STNPD-AIEAGLKVH-RGHAMINSTSAD-QWKMDIFFPMAKKY--EAAIIGLTM 133 (271)
T ss_dssp CCCEEE----E-------CSCHH-HHHHHHHHC-CSCCEEEEECSC-HHHHHHHHHHHHHH--TCEEEEESC
T ss_pred CCeEEE----e-------CCCHH-HHHHHHHhC-CCCCEEEECCCC-ccccHHHHHHHHHc--CCCEEEEec
Confidence 777644 2 22332 333333321 2545442 5554 23344555555553 578888865
No 363
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=37.89 E-value=62 Score=32.56 Aligned_cols=92 Identities=12% Similarity=0.088 Sum_probs=56.7
Q ss_pred hCCCCEEEecccC-CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECCC----C
Q psy15811 419 RAGVDYLALETIP-AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV----R 493 (581)
Q Consensus 419 ~~gvD~i~~ET~p-~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~----~ 493 (581)
..|||.|.+-+-+ ++.++..+++.+++ .++.|..++++-..-. +.+..+..+.+ ...++..|.+.-+ .
T Consensus 98 ~~Gvd~~ri~~~~~nle~~~~~v~~ak~-~G~~v~~~~~~~~~~~-----~~~~~l~~~~~-~~~G~~~i~l~Dt~G~~~ 170 (320)
T 3dxi_A 98 IGLVDMIRIAIDPQNIDRAIVLAKAIKT-MGFEVGFNVMYMSKWA-----EMNGFLSKLKA-IDKIADLFCMVDSFGGIT 170 (320)
T ss_dssp TTTCSEEEEEECGGGHHHHHHHHHHHHT-TTCEEEEEECCTTTGG-----GSTTSGGGGGG-GTTTCSEEEEECTTSCCC
T ss_pred hcCCCEEEEEecHHHHHHHHHHHHHHHH-CCCEEEEEEEeCCCCC-----CHHHHHHHHHH-hhCCCCEEEECcccCCCC
Confidence 4799998666543 37778888888887 5888766665421111 11112222221 1346677777652 6
Q ss_pred CccchHHHHHHHhhCCCCeEEEeeC
Q psy15811 494 PSHVSTLVRCIKQSHPTVQTIVYPN 518 (581)
Q Consensus 494 p~~~~~~l~~l~~~~~~~pl~~ypN 518 (581)
|..+..+++.++... +.|+.+...
T Consensus 171 P~~~~~lv~~l~~~~-~~~i~~H~H 194 (320)
T 3dxi_A 171 PKEVKNLLKEVRKYT-HVPVGFHGH 194 (320)
T ss_dssp HHHHHHHHHHHHHHC-CSCEEEECB
T ss_pred HHHHHHHHHHHHHhC-CCeEEEEeC
Confidence 888889999998876 578777653
No 364
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=37.77 E-value=2.5e+02 Score=26.00 Aligned_cols=93 Identities=14% Similarity=0.143 Sum_probs=54.6
Q ss_pred HHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEc--CCCcCCCCCCHHHHHHHHHhhCCCCceEEE
Q psy15811 155 RPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCK--DDTHTSHGELISSAVTSCLLANPDQIQAIG 232 (581)
Q Consensus 155 ~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~--~~g~l~~G~~~~~~~~~~~~~~~~~~~~vG 232 (581)
.+.++.+.++|++.+-+-+ . ..++.+++..++|++- .... +++++.-+.+.++ +..+. ..|++.|-
T Consensus 39 ~~~a~~~~~~G~~~i~~~~---~----~~i~~i~~~~~~p~i~-~~~~~~~~~~~~i~~~~~~-i~~~~---~~Gad~V~ 106 (234)
T 1yxy_A 39 PLMAKAAQEAGAVGIRANS---V----RDIKEIQAITDLPIIG-IIKKDYPPQEPFITATMTE-VDQLA---ALNIAVIA 106 (234)
T ss_dssp HHHHHHHHHHTCSEEEEES---H----HHHHHHHTTCCSCEEE-ECBCCCTTSCCCBSCSHHH-HHHHH---TTTCSEEE
T ss_pred HHHHHHHHHCCCcEeecCC---H----HHHHHHHHhCCCCEEe-eEcCCCCccccccCChHHH-HHHHH---HcCCCEEE
Confidence 4567788889999987642 3 2355666656889742 2111 2334444445544 34443 47888887
Q ss_pred eCCC---Ch--hhHHHHHHHHHhhCCCCceEE
Q psy15811 233 VNCV---RP--SHVSTLVRCIKQSHPTVQTIV 259 (581)
Q Consensus 233 vNC~---~p--~~~~~~l~~l~~~~~~~p~~~ 259 (581)
+... .| ..+.++++.+++...+.++++
T Consensus 107 l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~ 138 (234)
T 1yxy_A 107 MDCTKRDRHDGLDIASFIRQVKEKYPNQLLMA 138 (234)
T ss_dssp EECCSSCCTTCCCHHHHHHHHHHHCTTCEEEE
T ss_pred EcccccCCCCCccHHHHHHHHHHhCCCCeEEE
Confidence 7664 35 356778888876422444443
No 365
>3l52_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, PSI-2, protein structure initiative; 1.35A {Streptomyces avermitilis} PDB: 3v75_A*
Probab=37.77 E-value=88 Score=30.93 Aligned_cols=153 Identities=17% Similarity=0.095 Sum_probs=89.4
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEE-----EecccCC--HHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHH
Q psy15811 401 MTEADLIAWHRPNVEALVRAGVDYL-----ALETIPA--EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAV 473 (581)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~~gvD~i-----~~ET~p~--~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~ 473 (581)
-+.+-+.++-+..++.+.+ .|.++ +||.... +...+-+++.+++ .+.+|+.-+-+.| .|++....+
T Consensus 43 ~~~~~~~~~~~~ivd~l~~-~v~~~Kvg~~lf~~~G~~G~~~l~~~i~~l~~-~g~~VflDlK~~D-----IpnTv~~ya 115 (284)
T 3l52_A 43 DDVAGLERFSRTVVEALGE-HVAVFKPQSAFFERFGSRGVAVLEKTVAEARA-AGALVVMDAKRGD-----IGSTMAAYA 115 (284)
T ss_dssp SSHHHHHHHHHHHHHHHTT-TCSEEEEBHHHHHTTHHHHHHHHHHHHHHHHH-TTCEEEEEEEECC-----CHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhCC-cceEEEeeHHHHHhcCHHHHHHHHHHHHHHHH-CCCcEEEEecccC-----cHHHHHHHH
Confidence 3667888888888888764 45554 3443321 3344556777776 5899998887654 455666666
Q ss_pred HHHHhhC---CCCceEEEECC-CCCccchHHHHHHHhhCCCCe-EEEeeCCCCCcccccccc-cCCcCHHHHHHHHHHHH
Q psy15811 474 TSCLLAN---PDQIQAIGVNC-VRPSHVSTLVRCIKQSHPTVQ-TIVYPNKGGVWDSVHMKW-LDTEDEYSILHYVPQWL 547 (581)
Q Consensus 474 ~~l~~~~---~~~~~~iGiNC-~~p~~~~~~l~~l~~~~~~~p-l~~ypNag~~~~~~~~~~-~~~~~~~~~~~~~~~w~ 547 (581)
+.+ .. ..+++++-++. .+...+.++++.....+..+. |.-.-|.|.. +...... ....--+.+++.+.+|-
T Consensus 116 ~~~--~~~~~~lg~D~vTvh~~~G~~~l~~~~~~a~~~~kgvfvL~~tSnpg~~-~~q~~~~~~g~~l~e~V~~~a~~~~ 192 (284)
T 3l52_A 116 EAF--LRKDSPLFSDALTVSPYLGYGSLRPAVELARESGAGLFVLALTSNPEGG-EVQHAVRTDGRDVAATMLAHLAAEN 192 (284)
T ss_dssp HHH--SSTTSTTCCSEEEECCTTCGGGGHHHHHHHHHHTCEEEEEEECCSTTTH-HHHTCBCTTSCBHHHHHHHHHHHHT
T ss_pred HHH--hccccccCCcEEEEeccCCHHHHHHHHHHHHhcCCeEEEEEeCCCCChH-HHHhccccCCCcHHHHHHHHHHHhc
Confidence 665 22 35789999999 678888888877766542233 2333454421 1000000 00111246778888885
Q ss_pred H--cCCcEEeecCCCc-hH
Q psy15811 548 E--EGVNIIGGCCEVT-SY 563 (581)
Q Consensus 548 ~--~G~~iiGGCCGt~-P~ 563 (581)
. .+...+|=-||.| |+
T Consensus 193 ~~~~~~g~~G~VvgAT~pe 211 (284)
T 3l52_A 193 AGEEPLGSFGAVVGATLGD 211 (284)
T ss_dssp TTCSSCCSEEEEECTTCSC
T ss_pred cccCcCCCeeEEECCCchh
Confidence 3 1234477777766 54
No 366
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=37.60 E-value=2.3e+02 Score=28.94 Aligned_cols=99 Identities=20% Similarity=0.278 Sum_probs=58.1
Q ss_pred HHHHHHCCCcEEEEE-ccCC-------------HHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhh
Q psy15811 158 VEALVRAGVDYLALE-TIPA-------------EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 223 (581)
Q Consensus 158 ~~~l~~~gvD~l~~E-T~~~-------------~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~ 223 (581)
++..+++|+|.+-+- -.++ ++.++.+++.+|+. +..+-+.|++++. .-.+++.+++.+...
T Consensus 80 i~~a~~~g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~-g~~~~v~~~~ed~----~~~~~~~~~~~~~~~ 154 (382)
T 2ztj_A 80 AKVAVETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREA-APHVEVRFSAEDT----FRSEEQDLLAVYEAV 154 (382)
T ss_dssp HHHHHHTTCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHH-CTTSEEEEEETTT----TTSCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCCEEEEEEEEeC----CCCCHHHHHHHHHHH
Confidence 456678899976432 2222 34566777777775 5334556666643 234444444333322
Q ss_pred CCCCceEEEeC----CCChhhHHHHHHHHHhhC-CCCceEEecC
Q psy15811 224 NPDQIQAIGVN----CVRPSHVSTLVRCIKQSH-PTVQTIVYPN 262 (581)
Q Consensus 224 ~~~~~~~vGvN----C~~p~~~~~~l~~l~~~~-~~~p~~~~pn 262 (581)
... ++.|.+- +..|..+.++++.+++.. .+.||.+..-
T Consensus 155 ~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~i~~H~H 197 (382)
T 2ztj_A 155 APY-VDRVGLADTVGVATPRQVYALVREVRRVVGPRVDIEFHGH 197 (382)
T ss_dssp GGG-CSEEEEEETTSCCCHHHHHHHHHHHHHHHTTTSEEEEEEB
T ss_pred HHh-cCEEEecCCCCCCCHHHHHHHHHHHHHhcCCCCeEEEEeC
Confidence 234 6766663 335999999999998741 4677776643
No 367
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=37.58 E-value=1.1e+02 Score=29.16 Aligned_cols=97 Identities=12% Similarity=0.190 Sum_probs=59.7
Q ss_pred HHHHHHHHHCCCcEEEEE-----ccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCce
Q psy15811 155 RPNVEALVRAGVDYLALE-----TIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ 229 (581)
Q Consensus 155 ~~q~~~l~~~gvD~l~~E-----T~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~ 229 (581)
.++++.+ ++|+|.+=+- .+|.+.....+++.+|+.+++|+-+-+.+.+.+ .-++.++ ..|++
T Consensus 16 ~~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~~~~~dvhLmv~dp~-----~~i~~~~-------~aGAd 82 (231)
T 3ctl_A 16 KEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRPQ-----DYIAQLA-------RAGAD 82 (231)
T ss_dssp HHHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTCCSCEEEEEESSCGG-----GTHHHHH-------HHTCS
T ss_pred HHHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhccCCcEEEEEEecCHH-----HHHHHHH-------HcCCC
Confidence 4567778 8998875333 234454556688888877789999888776432 2233332 25677
Q ss_pred EEEeCCCC-hhhHHHHHHHHHhhCCCCceEEecCCC
Q psy15811 230 AIGVNCVR-PSHVSTLVRCIKQSHPTVQTIVYPNKG 264 (581)
Q Consensus 230 ~vGvNC~~-p~~~~~~l~~l~~~~~~~p~~~~pnag 264 (581)
.|-+=+-. ..++.++++.+++.+.+.-+.+.|...
T Consensus 83 ~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp 118 (231)
T 3ctl_A 83 FITLHPETINGQAFRLIDEIRRHDMKVGLILNPETP 118 (231)
T ss_dssp EEEECGGGCTTTHHHHHHHHHHTTCEEEEEECTTCC
T ss_pred EEEECcccCCccHHHHHHHHHHcCCeEEEEEECCCc
Confidence 77665532 235778888888753444455555544
No 368
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=37.46 E-value=3.1e+02 Score=27.04 Aligned_cols=166 Identities=13% Similarity=0.111 Sum_probs=90.1
Q ss_pred CceEEeccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccc---C------CHHHHHHHH---
Q psy15811 373 SSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI---P------AEKEALALV--- 440 (581)
Q Consensus 373 ~v~VagsiGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l~~~gvD~i~~ET~---p------~~~Ea~a~~--- 440 (581)
+.+|.|=+--+++.+++|..| .+.+ .-.++++.+.+.|+|+|=+--- | ..+|..-++
T Consensus 39 ~~~iMgilNvTPDSFsdgg~~-------~~~~----~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI 107 (297)
T 1tx2_A 39 KTLIMGILNVTPDSFSDGGSY-------NEVD----AAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMI 107 (297)
T ss_dssp SCEEEEECCCCCCTTCSSCBH-------HHHH----HHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCccccCCcc-------CCHH----HHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHH
Confidence 467888888888888876433 1233 3345666777899999855422 2 266666566
Q ss_pred HHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECCCCCc-cchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 441 KLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS-HVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 441 ~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~~p~-~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
+.+++..++|+ |+- ....+ ++++..+. ++. -||-+.-. ....+++.++.. +.|+++.++.
T Consensus 108 ~~l~~~~~vpi--SID---------T~~~~-V~~aAl~a---Ga~--iINdvsg~~~d~~m~~~aa~~--g~~vVlmh~~ 168 (297)
T 1tx2_A 108 QAVSKEVKLPI--SID---------TYKAE-VAKQAIEA---GAH--IINDIWGAKAEPKIAEVAAHY--DVPIILMHNR 168 (297)
T ss_dssp HHHHHHSCSCE--EEE---------CSCHH-HHHHHHHH---TCC--EEEETTTTSSCTHHHHHHHHH--TCCEEEECCC
T ss_pred HHHHhcCCceE--EEe---------CCCHH-HHHHHHHc---CCC--EEEECCCCCCCHHHHHHHHHh--CCcEEEEeCC
Confidence 55554346664 441 11222 22332222 334 35764332 245556666665 4899999987
Q ss_pred CCCcccccccccCC-cC-HHHHHHHHHHHHHcCCc---EE---eecCCCchHHHHHHHHHHhc
Q psy15811 520 GGVWDSVHMKWLDT-ED-EYSILHYVPQWLEEGVN---II---GGCCEVTSYEIQQMRIMIDE 574 (581)
Q Consensus 520 g~~~~~~~~~~~~~-~~-~~~~~~~~~~w~~~G~~---ii---GGCCGt~P~hI~al~~~l~~ 574 (581)
|.+. +... .+ .+.+.+.+....+.|+. || |=--|.+.+|--++-+.++.
T Consensus 169 G~p~------y~d~v~ev~~~l~~~i~~a~~~GI~~~~IilDPg~Gfgk~~~~n~~ll~~l~~ 225 (297)
T 1tx2_A 169 DNMN------YRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQ 225 (297)
T ss_dssp SCCC------CSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTGGG
T ss_pred CCCC------cchHHHHHHHHHHHHHHHHHHcCCChhcEEEeCCCCcCCCHHHHHHHHHHHHH
Confidence 6432 1000 00 23455666677788876 43 21125666665555445443
No 369
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=37.38 E-value=2.7e+02 Score=26.24 Aligned_cols=95 Identities=16% Similarity=0.134 Sum_probs=57.6
Q ss_pred HHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcC-CCc-CCCCCcHHHHHHHHHhhCCCCceE
Q psy15811 409 WHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKD-DTH-TSHGELISSAVTSCLLANPDQIQA 486 (581)
Q Consensus 409 ~~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~-~~~-l~~G~~~~~~~~~l~~~~~~~~~~ 486 (581)
...+.+++..++|+..|-..+ .. .++.+|+..++|++ ....++ .+. ..-+.+++++-..+ ..+++.
T Consensus 37 ~~~~~A~a~~~~Ga~~i~~~~---~~----~i~~ir~~v~~Pvi-g~~k~d~~~~~~~I~~~~~~i~~~~----~~Gad~ 104 (232)
T 3igs_A 37 IVAAMALAAEQAGAVAVRIEG---ID----NLRMTRSLVSVPII-GIIKRDLDESPVRITPFLDDVDALA----QAGAAI 104 (232)
T ss_dssp HHHHHHHHHHHTTCSEEEEES---HH----HHHHHHTTCCSCEE-EECBCCCSSCCCCBSCSHHHHHHHH----HHTCSE
T ss_pred hHHHHHHHHHHCCCeEEEECC---HH----HHHHHHHhcCCCEE-EEEeecCCCcceEeCccHHHHHHHH----HcCCCE
Confidence 345778888889999988743 33 35667766899983 432232 121 22233455544332 235677
Q ss_pred EEECCC---CCccchHHHHHHHhhCCCCeEEEee
Q psy15811 487 IGVNCV---RPSHVSTLVRCIKQSHPTVQTIVYP 517 (581)
Q Consensus 487 iGiNC~---~p~~~~~~l~~l~~~~~~~pl~~yp 517 (581)
|-+++. .|+.+..+++.++.. +.++++-.
T Consensus 105 V~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v 136 (232)
T 3igs_A 105 IAVDGTARQRPVAVEALLARIHHH--HLLTMADC 136 (232)
T ss_dssp EEEECCSSCCSSCHHHHHHHHHHT--TCEEEEEC
T ss_pred EEECccccCCHHHHHHHHHHHHHC--CCEEEEeC
Confidence 777774 588888888888765 35655543
No 370
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A*
Probab=37.38 E-value=70 Score=32.92 Aligned_cols=52 Identities=13% Similarity=0.176 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHhCC--CCEEEec-----ccCCHHHHHHHHHHHHhcCCCeEEEE-EEEcC
Q psy15811 407 IAWHRPNVEALVRAG--VDYLALE-----TIPAEKEALALVKLLREFPGQKAWLS-FSCKD 459 (581)
Q Consensus 407 ~~~~~~~~~~l~~~g--vD~i~~E-----T~p~~~Ea~a~~~~~~~~~~~pv~iS-ft~~~ 459 (581)
.+.+...++.|.+.| +|.|-+. ..|+..+.+.+++.+.. .++|++|| +.+..
T Consensus 208 ~~~~~~~v~~l~~~g~~iDgiG~Q~H~~~~~p~~~~i~~~l~~~a~-~Gl~i~iTElDi~~ 267 (378)
T 1ur1_A 208 REATVEMIERLQKRGMPIHGLGIQGHLGIDTPPIAEIEKSIIAFAK-LGLRVHFTSLDVDV 267 (378)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHT-TTCEEEEEEEEEEC
T ss_pred hHHHHHHHHHHHHCCCCcceEEecCcCCCCCCCHHHHHHHHHHHHh-cCCeEEEEecccCC
Confidence 455667888888888 5999986 45888999999998887 59999998 55543
No 371
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=37.13 E-value=85 Score=29.58 Aligned_cols=98 Identities=13% Similarity=0.068 Sum_probs=54.5
Q ss_pred HHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCC-cC-----CCCCcHHHHHHHHHhhCCCCce
Q psy15811 412 PNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDT-HT-----SHGELISSAVTSCLLANPDQIQ 485 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~-~l-----~~G~~~~~~~~~l~~~~~~~~~ 485 (581)
++++.+++.|+|.+.+-+.+. .+-..+.++ +++ +..+++++.++.+. .+ .++.+..+.++.+ ...++.
T Consensus 86 ~~~~~~~~~Gad~V~lg~~~l-~~p~~~~~~-~~~-g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~---~~~G~~ 159 (241)
T 1qo2_A 86 DYAEKLRKLGYRRQIVSSKVL-EDPSFLKSL-REI-DVEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRL---KEYGLE 159 (241)
T ss_dssp HHHHHHHHTTCCEEEECHHHH-HCTTHHHHH-HTT-TCEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHH---HTTTCC
T ss_pred HHHHHHHHCCCCEEEECchHh-hChHHHHHH-HHc-CCcEEEEEEecCCEEEECCceecCCCCHHHHHHHH---HhCCCC
Confidence 466667778999998765431 222223344 543 45567777776311 11 1233667766665 234566
Q ss_pred EEEECCCCCcc-----chHHHHHHHhhCCCCeEEEe
Q psy15811 486 AIGVNCVRPSH-----VSTLVRCIKQSHPTVQTIVY 516 (581)
Q Consensus 486 ~iGiNC~~p~~-----~~~~l~~l~~~~~~~pl~~y 516 (581)
.|.++...... =..+++++++.. ++|+++-
T Consensus 160 ~i~~t~~~~~g~~~g~~~~~i~~l~~~~-~iPvia~ 194 (241)
T 1qo2_A 160 EIVHTEIEKDGTLQEHDFSLTKKIAIEA-EVKVLAA 194 (241)
T ss_dssp EEEEEETTHHHHTCCCCHHHHHHHHHHH-TCEEEEE
T ss_pred EEEEEeecccccCCcCCHHHHHHHHHhc-CCcEEEE
Confidence 67776632211 146677777665 5787653
No 372
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A*
Probab=37.00 E-value=63 Score=32.96 Aligned_cols=51 Identities=14% Similarity=0.174 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHCC--CcEEEEEc-----cCCHHHHHHHHHHHHhcCCCcEEEE-EEEc
Q psy15811 151 IAWHRPNVEALVRAG--VDYLALET-----IPAEKEALALVKLLREFPGQKAWLS-FSCK 202 (581)
Q Consensus 151 ~~~~~~q~~~l~~~g--vD~l~~ET-----~~~~~E~~aa~~a~~~~~~~pv~is-ft~~ 202 (581)
.+.+.+.++.|.+.| +|.|-+.. .++..+++.+++.+.+. ++||+|| +.+.
T Consensus 201 ~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~p~~~~~~~~l~~~a~~-Gl~i~iTElDi~ 259 (356)
T 2uwf_A 201 RDDLYNLVKDLLEQGVPIDGVGHQSHIQIGWPSIEDTRASFEKFTSL-GLDNQVTELDMS 259 (356)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTT-TCEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHCCCcccEEEEEEecCCCCCCHHHHHHHHHHHHhc-CCcEEEEecccc
Confidence 455778889999988 59998754 37889999999988876 8999998 5554
No 373
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=36.86 E-value=2.8e+02 Score=26.35 Aligned_cols=102 Identities=12% Similarity=0.137 Sum_probs=59.9
Q ss_pred HHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcC--CCeEEEEEEEcCCC---cC---CCCCcHHHHHHHHHhh-CCCC
Q psy15811 413 NVEALVRAGVDYLALETIPAEKEALALVKLLREFP--GQKAWLSFSCKDDT---HT---SHGELISSAVTSCLLA-NPDQ 483 (581)
Q Consensus 413 ~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~--~~pv~iSft~~~~~---~l---~~G~~~~~~~~~l~~~-~~~~ 483 (581)
.++.+.+.|+|++.+=...-..-++++++.+++.. +.|-++.+++-... .+ ....++.+.+..+... ...+
T Consensus 78 ~~~~~~~~gad~vTvh~~~G~~~~~~a~~~~~~~~~~~~~~l~~Vt~LTS~~~~~l~~~g~~~~~~~~v~~~A~~a~~~g 157 (239)
T 3tr2_A 78 ACRAVAELGVWMMNIHISGGRTMMETVVNALQSITLKEKPLLIGVTILTSLDGSDLKTLGIQEKVPDIVCRMATLAKSAG 157 (239)
T ss_dssp HHHHHHHTTCSEEEEEGGGCHHHHHHHHHHHHTCCCSSCCEEEEECSCTTCCHHHHHHTTCCSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcCcCCCceEEEEEEEeeCCHHHHHhcCCCCCHHHHHHHHHHHHHHcC
Confidence 34567789999999988888877888888887642 25666666543211 11 1224566666554222 1234
Q ss_pred ceEEEECCCCCccchHHHHHHHhhCCCCeEEEeeCCCC
Q psy15811 484 IQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGG 521 (581)
Q Consensus 484 ~~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~ypNag~ 521 (581)
++ |+=|. +... +.++....+-.+.+-|-.+.
T Consensus 158 ~~--GvV~s-~~e~----~~ir~~~~~~fl~vtPGIr~ 188 (239)
T 3tr2_A 158 LD--GVVCS-AQEA----ALLRKQFDRNFLLVTPGIRL 188 (239)
T ss_dssp CC--EEECC-HHHH----HHHHTTCCTTSEEEECCBC-
T ss_pred CC--EEEEC-chhH----HHHHHhcCCCcEEECCCcCC
Confidence 55 77783 3322 33454432345777787764
No 374
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=36.58 E-value=40 Score=34.42 Aligned_cols=65 Identities=12% Similarity=0.100 Sum_probs=34.2
Q ss_pred HHHHHHHCCCcEEEEEc---------------cCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHH
Q psy15811 157 NVEALVRAGVDYLALET---------------IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL 221 (581)
Q Consensus 157 q~~~l~~~gvD~l~~ET---------------~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~ 221 (581)
.++.+.++|||+|.+-- .|.+.-+..+.++.++. ++||+. +|-.++|..+.+ ++
T Consensus 174 ~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~-~ipvIa------~GGI~~g~di~k---Al- 242 (351)
T 2c6q_A 174 MVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGL-KGHIIS------DGGCSCPGDVAK---AF- 242 (351)
T ss_dssp HHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHT-TCEEEE------ESCCCSHHHHHH---HH-
T ss_pred HHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhc-CCcEEE------eCCCCCHHHHHH---HH-
Confidence 45667788999986621 12222222333333332 688776 333545554443 33
Q ss_pred hhCCCCceEEEeCC
Q psy15811 222 LANPDQIQAIGVNC 235 (581)
Q Consensus 222 ~~~~~~~~~vGvNC 235 (581)
..|+++|++-=
T Consensus 243 ---alGA~~V~vG~ 253 (351)
T 2c6q_A 243 ---GAGADFVMLGG 253 (351)
T ss_dssp ---HTTCSEEEEST
T ss_pred ---HcCCCceeccH
Confidence 25777777644
No 375
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=36.54 E-value=3e+02 Score=26.53 Aligned_cols=91 Identities=16% Similarity=0.075 Sum_probs=52.1
Q ss_pred HHHHHHHHCCCcEEEEE----ccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEE
Q psy15811 156 PNVEALVRAGVDYLALE----TIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 231 (581)
Q Consensus 156 ~q~~~l~~~gvD~l~~E----T~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~v 231 (581)
++++.+++.|+|+|=+= .++..+|+..++..+++..++|+.| + ....+ +++++.+.. .|++.|
T Consensus 29 ~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~~~~pisI----D-------T~~~~-v~~aAl~a~-~Ga~iI 95 (262)
T 1f6y_A 29 EWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVSNLTLCL----D-------STNIK-AIEAGLKKC-KNRAMI 95 (262)
T ss_dssp HHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTTCCSEEEE----E-------CSCHH-HHHHHHHHC-SSCEEE
T ss_pred HHHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHHhCCCeEEE----e-------CCCHH-HHHHHHhhC-CCCCEE
Confidence 45566677899998443 4667888889999998754666533 3 12232 333333311 255544
Q ss_pred -EeCCCChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 232 -GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 232 -GvNC~~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
-+|-. .+.+...++.+.+ .+.|++++++
T Consensus 96 Ndvs~~-~d~~~~~~~~~a~--~~~~vvlmh~ 124 (262)
T 1f6y_A 96 NSTNAE-REKVEKLFPLAVE--HGAALIGLTM 124 (262)
T ss_dssp EEECSC-HHHHHHHHHHHHH--TTCEEEEESC
T ss_pred EECCCC-cccHHHHHHHHHH--hCCcEEEEcC
Confidence 25543 3444455555555 4678998876
No 376
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=36.50 E-value=89 Score=29.34 Aligned_cols=93 Identities=6% Similarity=0.042 Sum_probs=48.9
Q ss_pred HHHHHHHHCCCcEEEEEc--cCCHHHHHHHHHHHHhcCCCcEEEEEEEcC---CC--cCC-----CCCCHHHHHHHHHhh
Q psy15811 156 PNVEALVRAGVDYLALET--IPAEKEALALVKLLREFPGQKAWLSFSCKD---DT--HTS-----HGELISSAVTSCLLA 223 (581)
Q Consensus 156 ~q~~~l~~~gvD~l~~ET--~~~~~E~~aa~~a~~~~~~~pv~isft~~~---~g--~l~-----~G~~~~~~~~~~~~~ 223 (581)
++++.+++.|+|.+.+=+ +.+...+..+++.+. ..+++++.+.- ++ .+. ++ +..+.+..+.+
T Consensus 87 ~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g----~~~~~~ld~~~~~~~~~v~~~g~~~~~~-~~~e~~~~~~~- 160 (244)
T 2y88_A 87 ESLAAALATGCARVNVGTAALENPQWCARVIGEHG----DQVAVGLDVQIIDGEHRLRGRGWETDGG-DLWDVLERLDS- 160 (244)
T ss_dssp HHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHHG----GGEEEEEEEEEETTEEEEEEGGGTEEEE-EHHHHHHHHHH-
T ss_pred HHHHHHHHcCCCEEEECchHhhChHHHHHHHHHcC----CCEEEEEeccccCCCCEEEECCccCCCC-CHHHHHHHHHh-
Confidence 357778889999998754 455554555555443 22444444430 00 011 11 44555566553
Q ss_pred CCCCceEEEeCCCChh-----hHHHHHHHHHhhCCCCce
Q psy15811 224 NPDQIQAIGVNCVRPS-----HVSTLVRCIKQSHPTVQT 257 (581)
Q Consensus 224 ~~~~~~~vGvNC~~p~-----~~~~~l~~l~~~~~~~p~ 257 (581)
.+++.|.++...++ .-.+.++++.+. .++|+
T Consensus 161 --~G~~~i~~~~~~~~~~~~g~~~~~~~~l~~~-~~ipv 196 (244)
T 2y88_A 161 --EGCSRFVVTDITKDGTLGGPNLDLLAGVADR-TDAPV 196 (244)
T ss_dssp --TTCCCEEEEETTTTTTTSCCCHHHHHHHHTT-CSSCE
T ss_pred --CCCCEEEEEecCCccccCCCCHHHHHHHHHh-CCCCE
Confidence 57777777663221 123566666653 34443
No 377
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=36.46 E-value=1.4e+02 Score=35.61 Aligned_cols=102 Identities=10% Similarity=0.129 Sum_probs=62.6
Q ss_pred HHHHHhCCCCEE-EecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCC----CCCcHHHHHHHHHhhCCCCceEEE
Q psy15811 414 VEALVRAGVDYL-ALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTS----HGELISSAVTSCLLANPDQIQAIG 488 (581)
Q Consensus 414 ~~~l~~~gvD~i-~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~----~G~~~~~~~~~l~~~~~~~~~~iG 488 (581)
++...++|+|.| +|-..++....+-+.+.+++ .+.-+...++. ..+.+. .-.+++-.++.+......+++.|.
T Consensus 633 v~~a~~~Gvd~irif~~~sd~~~~~~~~~~~~e-~g~~~~~~i~~-~~~~~~pe~~~~~~~~~~~~~a~~~~~~Ga~~i~ 710 (1150)
T 3hbl_A 633 VQESAKAGIDVFRIFDSLNWVDQMKVANEAVQE-AGKISEGTICY-TGDILNPERSNIYTLEYYVKLAKELEREGFHILA 710 (1150)
T ss_dssp HHHHHHTTCCEEEEECTTCCGGGGHHHHHHHHH-TTCEEEEEEEC-CSCTTCTTTCSSSSHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHhCCcCEEEEEeeCCHHHHHHHHHHHHHH-HhhheeEEEee-cccccChhhcCCCCHHHHHHHHHHHHHcCCCeee
Confidence 455567899998 56666667777777777776 35444433332 222211 113444343333323445677777
Q ss_pred ECC----CCCccchHHHHHHHhhCCCCeEEEeeC
Q psy15811 489 VNC----VRPSHVSTLVRCIKQSHPTVQTIVYPN 518 (581)
Q Consensus 489 iNC----~~p~~~~~~l~~l~~~~~~~pl~~ypN 518 (581)
+-- ..|..+..+++.++... ++|+.+...
T Consensus 711 l~Dt~G~~~P~~~~~lv~~l~~~~-~~~i~~H~H 743 (1150)
T 3hbl_A 711 IKDMAGLLKPKAAYELIGELKSAV-DLPIHLHTH 743 (1150)
T ss_dssp EEETTCCCCHHHHHHHHHHHHHHC-CSCEEEEEC
T ss_pred EcCccCCCCHHHHHHHHHHHHHhc-CCeEEEEeC
Confidence 755 36888999999998875 688877664
No 378
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=36.42 E-value=43 Score=33.82 Aligned_cols=65 Identities=14% Similarity=0.125 Sum_probs=35.2
Q ss_pred HHHHHHHCCCcEEEEEccCC-----HHH--------HHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhh
Q psy15811 157 NVEALVRAGVDYLALETIPA-----EKE--------ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 223 (581)
Q Consensus 157 q~~~l~~~gvD~l~~ET~~~-----~~E--------~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~ 223 (581)
.++.+.++|||.|.+-+-+- ..+ ...++..+++..++||+. +|-..+|.++.+++
T Consensus 162 ~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~~ipVIa------~GGI~~g~Dv~kal------ 229 (336)
T 1ypf_A 162 AVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPIIA------DGGIRTNGDVAKSI------ 229 (336)
T ss_dssp HHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTCSSCEEE------ESCCCSTHHHHHHH------
T ss_pred HHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHcCCcEEE------eCCCCCHHHHHHHH------
Confidence 56677889999998833221 000 112222223323788886 34455666555443
Q ss_pred CCCCceEEEeC
Q psy15811 224 NPDQIQAIGVN 234 (581)
Q Consensus 224 ~~~~~~~vGvN 234 (581)
..|+++|++-
T Consensus 230 -alGAdaV~iG 239 (336)
T 1ypf_A 230 -RFGATMVMIG 239 (336)
T ss_dssp -HTTCSEEEES
T ss_pred -HcCCCEEEeC
Confidence 1467777664
No 379
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=36.41 E-value=63 Score=31.00 Aligned_cols=81 Identities=14% Similarity=0.083 Sum_probs=47.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCcEEEEEccCCHHH----HHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHH
Q psy15811 144 SMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKE----ALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTS 219 (581)
Q Consensus 144 ~~~~~~~~~~~~~q~~~l~~~gvD~l~~ET~~~~~E----~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~ 219 (581)
.++.+++.+.|++. ..+.|++++|+-..+.+ -....+.++.. +.||++-.... .| ++..++..
T Consensus 115 ~i~~~~I~~~~~~l-----~~~~D~vlIEGagGl~~pl~~~~~~adlA~~l-~~pVILV~~~~------lg-~i~~~~lt 181 (242)
T 3qxc_A 115 PIDTDNLTQRLHNF-----TKTYDLVIVEGAGGLCVPITLEENMLDFALKL-KAKMLLISHDN------LG-LINDCLLN 181 (242)
T ss_dssp CCCHHHHHHHHHHG-----GGTCSEEEEECCSCTTCBSSSSCBHHHHHHHH-TCEEEEEECCS------TT-HHHHHHHH
T ss_pred cCCHHHHHHHHHHH-----HhcCCEEEEECCCCccccccccchHHHHHHHc-CCCEEEEEcCC------Cc-HHHHHHHH
Confidence 35677777766652 45899999999654432 12334556655 78988733222 23 56665544
Q ss_pred HHhh--CCCCceEEEeCCCCh
Q psy15811 220 CLLA--NPDQIQAIGVNCVRP 238 (581)
Q Consensus 220 ~~~~--~~~~~~~vGvNC~~p 238 (581)
+... .... .++=+|+..+
T Consensus 182 ~~~l~~~g~~-~GvIlN~v~~ 201 (242)
T 3qxc_A 182 DFLLKSHQLD-YKIAINLKGN 201 (242)
T ss_dssp HHHHHTSSSC-EEEEECCCTT
T ss_pred HHHHHhCCCC-EEEEEeCCCC
Confidence 4321 2333 6777899843
No 380
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=36.31 E-value=1.2e+02 Score=28.68 Aligned_cols=91 Identities=15% Similarity=0.084 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHCCCcEEEEEc-----------cC-----------CHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCC
Q psy15811 153 WHRPNVEALVRAGVDYLALET-----------IP-----------AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG 210 (581)
Q Consensus 153 ~~~~q~~~l~~~gvD~l~~ET-----------~~-----------~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G 210 (581)
...+.++.+.++ +|.|-+-+ ++ ++......++.+++..++|+.+-..... ....|
T Consensus 20 ~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~pv~~~~~~~~--~~~~~ 96 (248)
T 1geq_A 20 STLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIVLMTYYNP--IYRAG 96 (248)
T ss_dssp HHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCCEEEEECHHH--HHHHC
T ss_pred HHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCCCEEEEeccch--hhhcC
Confidence 455678888888 99987772 11 3445566777777656788765210111 00001
Q ss_pred CCHHHHHHHHHhhCCCCceEEEeCCCChhhHHHHHHHHHhh
Q psy15811 211 ELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQS 251 (581)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~vGvNC~~p~~~~~~l~~l~~~ 251 (581)
..+.+..+.+ .|++.|-+.+..+++...+++.+++.
T Consensus 97 --~~~~~~~~~~---~Gad~v~~~~~~~~~~~~~~~~~~~~ 132 (248)
T 1geq_A 97 --VRNFLAEAKA---SGVDGILVVDLPVFHAKEFTEIAREE 132 (248)
T ss_dssp --HHHHHHHHHH---HTCCEEEETTCCGGGHHHHHHHHHHH
T ss_pred --HHHHHHHHHH---CCCCEEEECCCChhhHHHHHHHHHHh
Confidence 2455555543 67888888876666777777777664
No 381
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=36.29 E-value=2.8e+02 Score=28.13 Aligned_cols=84 Identities=20% Similarity=0.190 Sum_probs=50.6
Q ss_pred HHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCC--CCHHHHHHHHHhhC-CCCceEEEeC
Q psy15811 158 VEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG--ELISSAVTSCLLAN-PDQIQAIGVN 234 (581)
Q Consensus 158 ~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G--~~~~~~~~~~~~~~-~~~~~~vGvN 234 (581)
++.+.+.|+|+|-+....++.|++..+ +-.+.++--+++. ++.| +.+.+.+..+.+.. ..+-..++..
T Consensus 266 l~~l~~~g~d~i~~d~~~dl~~ak~~~-------g~~~~l~Gnldp~--~L~gt~e~I~~~v~~~l~~~g~~~g~I~n~G 336 (368)
T 4exq_A 266 LEDLAATGVDAVGLDWTVNLGRARERV-------AGRVALQGNLDPT--ILFAPPEAIRAEARAVLDSYGNHPGHVFNLG 336 (368)
T ss_dssp HHHHHTSSCSEEECCTTSCHHHHHHHH-------TTSSEEEEEECGG--GGGSCHHHHHHHHHHHHHHHCSCSCEEEEES
T ss_pred HHHHHHhCCCEEeeCCCCCHHHHHHHh-------CCCEEEEECCCHH--HhCCCHHHHHHHHHHHHHHhCCCCCEEEeCC
Confidence 455778999999888777887765432 2224455556543 3344 34555555554421 2234888999
Q ss_pred CC-C----hhhHHHHHHHHHh
Q psy15811 235 CV-R----PSHVSTLVRCIKQ 250 (581)
Q Consensus 235 C~-~----p~~~~~~l~~l~~ 250 (581)
|+ . |+++..+++.+..
T Consensus 337 hgi~p~tp~Env~a~veav~~ 357 (368)
T 4exq_A 337 HGISQFTPPEHVAELVDEVHR 357 (368)
T ss_dssp SCCCTTCCHHHHHHHHHHHHH
T ss_pred CCCCCCcCHHHHHHHHHHHHH
Confidence 96 2 5666666665554
No 382
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=36.18 E-value=52 Score=30.99 Aligned_cols=86 Identities=13% Similarity=0.229 Sum_probs=49.3
Q ss_pred HHHHHHHHHHCCCcEEEEE-----ccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCc
Q psy15811 154 HRPNVEALVRAGVDYLALE-----TIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 228 (581)
Q Consensus 154 ~~~q~~~l~~~gvD~l~~E-----T~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~ 228 (581)
..++++.+.++|+|++=+= +++........++.+++..+.|+.+-+.+.+. +..++.+.. .++
T Consensus 21 l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~~~~~~v~lmv~d~-----~~~i~~~~~-------aga 88 (228)
T 1h1y_A 21 LAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNP-----SDYVEPLAK-------AGA 88 (228)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSCG-----GGGHHHHHH-------HTC
T ss_pred HHHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhcCCcEEEEEEecCH-----HHHHHHHHH-------cCC
Confidence 4567888899999987444 44543222345556666556687777766532 222433332 456
Q ss_pred eEEEeCCC-ChhhHHHHHHHHHhh
Q psy15811 229 QAIGVNCV-RPSHVSTLVRCIKQS 251 (581)
Q Consensus 229 ~~vGvNC~-~p~~~~~~l~~l~~~ 251 (581)
++|-+=.. .++.+.+.++.++..
T Consensus 89 d~v~vH~~~~~~~~~~~~~~i~~~ 112 (228)
T 1h1y_A 89 SGFTFHIEVSRDNWQELIQSIKAK 112 (228)
T ss_dssp SEEEEEGGGCTTTHHHHHHHHHHT
T ss_pred CEEEECCCCcccHHHHHHHHHHHc
Confidence 77755553 232226777777663
No 383
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=36.05 E-value=59 Score=34.44 Aligned_cols=155 Identities=14% Similarity=0.049 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEE--ecccCCHHHHHHHHHHHHhc-----CCCeEEEEEEEcCCCcCCCCCcHHHHHHH
Q psy15811 403 EADLIAWHRPNVEALVRAGVDYLA--LETIPAEKEALALVKLLREF-----PGQKAWLSFSCKDDTHTSHGELISSAVTS 475 (581)
Q Consensus 403 ~~~~~~~~~~~~~~l~~~gvD~i~--~ET~p~~~Ea~a~~~~~~~~-----~~~pv~iSft~~~~~~l~~G~~~~~~~~~ 475 (581)
.+.+.++-+..++.+.+ .|+++= .|-+- ......++.+++. .+.+|++-+-..| -|.+...+++.
T Consensus 28 ~~~~~~~a~~~v~~~~~-~v~~~Kvg~~lf~--~~G~~~v~~L~~~~~~~~~g~~VflDlK~~D-----IpnT~~~~a~~ 99 (453)
T 3qw4_B 28 AAAAVEECKRLIEQTHE-YAAAYKPNAAFFE--FFGAEGWAALSEVIRAVPAGIPVVLDAKRGD-----IADTADAYATS 99 (453)
T ss_dssp HHHHHHHHHHHHHHHGG-GCSEEEEBHHHHH--TTHHHHHHHHHHHHHTSCTTSCBEEEEEECC-----CHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhCC-cCcEEEEcHHHHH--hcCHHHHHHHHHHHHhhcCCCeEEEEeecCC-----hHHHHHHHHHH
Confidence 56777777777777764 456541 12111 1222333333331 4889998886654 35667777776
Q ss_pred HHhhCCCCceEEEECC-CCCccchHHHHHHHhhCCCCe-EEEeeCCCCCcccccccccCCcCHHHHHHHHH-HHHHcCCc
Q psy15811 476 CLLANPDQIQAIGVNC-VRPSHVSTLVRCIKQSHPTVQ-TIVYPNKGGVWDSVHMKWLDTEDEYSILHYVP-QWLEEGVN 552 (581)
Q Consensus 476 l~~~~~~~~~~iGiNC-~~p~~~~~~l~~l~~~~~~~p-l~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~-~w~~~G~~ 552 (581)
. ....+++++-|+. .+.+.+.++++.. +..+. +....|.+.. +...-+.....-.+...+.++ .|.+.|.
T Consensus 100 ~--~~~lg~d~vTvh~~~G~~~l~~~~~~~---~~~v~vL~~tS~~~~~-~lq~~~~~~~~~~~~V~~~a~~~~~~~g~- 172 (453)
T 3qw4_B 100 A--FKHLNAHAITASPYMGSDSLQPFMRYP---DKAVFVLCKTSNKGSN-DLQCLRVGDRYLYEAVAERAEGPWNVNGN- 172 (453)
T ss_dssp H--HTTSCCSEEEECSTTCHHHHHHHHTCT---TSEEEEEEECSSGGGG-GTTTSEETTEEHHHHHHHHHTTTTCTTSC-
T ss_pred H--HHHcCCCEEEEcccCCHHHHHHHHHhh---CCcEEEEEeCCCcchH-HHHhcccCCCCHHHHHHHHHHHHHhhcCC-
Confidence 5 2346889999998 5666665555421 11122 2222333210 011000100001245566677 7766664
Q ss_pred EEeecCC-CchHHHHHHHHHHh
Q psy15811 553 IIGGCCE-VTSYEIQQMRIMID 573 (581)
Q Consensus 553 iiGGCCG-t~P~hI~al~~~l~ 573 (581)
.|==|| |.|++++.||+.+.
T Consensus 173 -~GvV~gat~~~e~~~ir~~~~ 193 (453)
T 3qw4_B 173 -VGLVVGATDPVALARVRARAP 193 (453)
T ss_dssp -EEEEECTTCHHHHHHHHHHCS
T ss_pred -eEEEECCCCHHHHHHHHHhCC
Confidence 555566 67999999998764
No 384
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A
Probab=36.00 E-value=67 Score=33.12 Aligned_cols=51 Identities=18% Similarity=0.246 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHCCC--cEEEEEc-----cCCHHHHHHHHHHHHhcCCCcEEEE-EEEc
Q psy15811 151 IAWHRPNVEALVRAGV--DYLALET-----IPAEKEALALVKLLREFPGQKAWLS-FSCK 202 (581)
Q Consensus 151 ~~~~~~q~~~l~~~gv--D~l~~ET-----~~~~~E~~aa~~a~~~~~~~pv~is-ft~~ 202 (581)
.+.+.++++.|.+.|| |.|-+.. .++..+++.+++.+.+. ++||+|| +.+.
T Consensus 211 ~~~~~~~v~~l~~~g~piDgIG~Q~H~~~~~p~~~~~~~~l~~~a~l-GlpI~iTElDi~ 269 (379)
T 1r85_A 211 RTALYNLVKQLKEEGVPIDGIGHQSHIQIGWPSEAEIEKTINMFAAL-GLDNQITELDVS 269 (379)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEECSSSSCHHHHHHHHHHHHHT-TCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCceeEEEEeEEecCCCCCHHHHHHHHHHHHhc-CCeEEEeecccc
Confidence 3567778899999985 9998863 36889999999988876 8999998 5555
No 385
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=35.99 E-value=88 Score=30.00 Aligned_cols=89 Identities=12% Similarity=0.057 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHCCCcEEEEEc-cC---------------------CHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCC
Q psy15811 152 AWHRPNVEALVRAGVDYLALET-IP---------------------AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSH 209 (581)
Q Consensus 152 ~~~~~q~~~l~~~gvD~l~~ET-~~---------------------~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~ 209 (581)
+...+.++.+.++|||.|-+-+ ++ +..+....++.+|+..++|+++ +... +.....
T Consensus 32 ~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~Pv~~-m~~~-~~~~~~ 109 (262)
T 1rd5_A 32 ATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVL-LSYY-KPIMFR 109 (262)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSCEEE-ECCS-HHHHSC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEE-EecC-cHHHHH
Confidence 3456678899999999997753 12 4566677788888766899876 3211 101111
Q ss_pred CCCHHHHHHHHHhhCCCCceEEEeCCCChhhHHHHHHHHHhh
Q psy15811 210 GELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQS 251 (581)
Q Consensus 210 G~~~~~~~~~~~~~~~~~~~~vGvNC~~p~~~~~~l~~l~~~ 251 (581)
+ ++. +. ..|+++|-+....+++..++++.++++
T Consensus 110 ~--~~~----a~---~aGadgv~v~d~~~~~~~~~~~~~~~~ 142 (262)
T 1rd5_A 110 S--LAK----MK---EAGVHGLIVPDLPYVAAHSLWSEAKNN 142 (262)
T ss_dssp C--THH----HH---HTTCCEEECTTCBTTTHHHHHHHHHHT
T ss_pred H--HHH----HH---HcCCCEEEEcCCChhhHHHHHHHHHHc
Confidence 2 222 22 367888888766666777777777664
No 386
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=35.74 E-value=4.9e+02 Score=28.80 Aligned_cols=112 Identities=13% Similarity=0.070 Sum_probs=61.7
Q ss_pred CCCCCHHH---HHHHHHHHHHHHHHCCCcEEEEEc-c---------C-----------C----HHHHHHHHHHHHhc--C
Q psy15811 142 VDSMTEAD---LIAWHRPNVEALVRAGVDYLALET-I---------P-----------A----EKEALALVKLLREF--P 191 (581)
Q Consensus 142 ~~~~~~~~---~~~~~~~q~~~l~~~gvD~l~~ET-~---------~-----------~----~~E~~aa~~a~~~~--~ 191 (581)
.+.+|.+| +.+.|.+-++...++|.|.|=+=- . | + ..=+..+++++|+. +
T Consensus 136 p~~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~ 215 (729)
T 1o94_A 136 CKEMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGS 215 (729)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTT
T ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCC
Confidence 34567665 556788888888889999984321 0 1 0 11255566666653 3
Q ss_pred CCcEEEEEEEcCCCcCCCCCC----HHHHHHHHHhhCCCCceEEEeCCCC---------hh------hHHHHHHHHHhhC
Q psy15811 192 GQKAWLSFSCKDDTHTSHGEL----ISSAVTSCLLANPDQIQAIGVNCVR---------PS------HVSTLVRCIKQSH 252 (581)
Q Consensus 192 ~~pv~isft~~~~g~l~~G~~----~~~~~~~~~~~~~~~~~~vGvNC~~---------p~------~~~~~l~~l~~~~ 252 (581)
+.||.+-++..+.- -..|.+ ..+.+..+ + . +++++.+...+ |. ...+.++.+++.
T Consensus 216 ~~pv~vrls~~~~~-~~~G~~~~~~~~~~~~~l-~--~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~- 289 (729)
T 1o94_A 216 DCAIATRFGVDTVY-GPGQIEAEVDGQKFVEMA-D--S-LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQV- 289 (729)
T ss_dssp TSEEEEEEEEECSS-CTTSCCTTTHHHHHHHHH-G--G-GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTT-
T ss_pred CceEEEEEccccCc-CCCCCCchHHHHHHHHHH-H--h-hcCEEEEeeecccccccccCCccccCccccHHHHHHHHHH-
Confidence 78999999876320 012333 22333333 2 2 46776665432 11 124566777764
Q ss_pred CCCceEE
Q psy15811 253 PTVQTIV 259 (581)
Q Consensus 253 ~~~p~~~ 259 (581)
.++|++.
T Consensus 290 ~~~pvi~ 296 (729)
T 1o94_A 290 SKKPVLG 296 (729)
T ss_dssp CSSCEEC
T ss_pred CCCEEEE
Confidence 5666553
No 387
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=35.73 E-value=1.5e+02 Score=27.99 Aligned_cols=26 Identities=31% Similarity=0.539 Sum_probs=23.2
Q ss_pred ChHHHHHHHHHHHHhccccccccc-cc
Q psy15811 40 EPEACVETHRDFIRAGADIIQSSC-YQ 65 (581)
Q Consensus 40 ~Pe~v~~iH~~yl~AGAdiI~TnT-f~ 65 (581)
++|.+...-+-=.++|||+|.|.| |.
T Consensus 131 ~~e~i~~a~~ia~eaGADfVKTsTGf~ 157 (220)
T 1ub3_A 131 SPEEIARLAEAAIRGGADFLKTSTGFG 157 (220)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCCSSS
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 478888888889999999999999 76
No 388
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=35.70 E-value=49 Score=32.64 Aligned_cols=50 Identities=6% Similarity=0.086 Sum_probs=37.9
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEE
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAW 452 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~ 452 (581)
..+.+++.++..+.++.|.+.|+|+|++-....- ..+++.+|+..++||+
T Consensus 65 ~~s~~~i~~~~~~~~~~L~~~g~d~IVIACNTas---~~~l~~lr~~~~iPVi 114 (290)
T 2vvt_A 65 PRPAEQVVQFTWEMADFLLKKRIKMLVIACNTAT---AVALEEIKAALPIPVV 114 (290)
T ss_dssp TSCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHH---HHHHHHHHHHCSSCEE
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCcchh---HHHHHHHHHhCCCCEE
Confidence 3578999999999999999999999998865532 1246666655577755
No 389
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=35.10 E-value=37 Score=32.91 Aligned_cols=142 Identities=12% Similarity=0.158 Sum_probs=83.7
Q ss_pred EEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCC---------CcCCCCCcHHHHHHHHHhhCCCCceEEEECC-C--
Q psy15811 425 LALETIPAEKEALALVKLLREFPGQKAWLSFSCKDD---------THTSHGELISSAVTSCLLANPDQIQAIGVNC-V-- 492 (581)
Q Consensus 425 i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~---------~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC-~-- 492 (581)
|.+.-+|....+....+..++ .+..|++++-..+. +.|..|.+-++....+......-+.++|+|. .
T Consensus 30 vT~Ai~P~~p~~~~~a~~A~~-~G~EvllHlPMep~~~~~~~~gp~~L~~~~s~~ei~~~l~~al~~vP~a~GvnNHmGS 108 (245)
T 2nly_A 30 VTVAVMPFLEHSTKQAEIAQA-AGLEVIVHMPLEPKKGKISWLGPSGITSNLSVGEVKSRVRKAFDDIPYAVGLNNHMGS 108 (245)
T ss_dssp EEEEECSSSTTHHHHHHHHHH-TTCEEEEEEEECCC--------CCCBCTTCCHHHHHHHHHHHHHHSTTCCEEEEEECT
T ss_pred eEEEECCCCCCHHHHHHHHHH-CCCEEEEEcCCCCCCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHCCCcEEEeccccc
Confidence 666777777777778888887 69999999976432 3355677777776666443343445789997 2
Q ss_pred ----CCccchHHHHHHHhhCCCCeEEEeeCC------------CCCcccccccccCC--cCHHHHHH----HHHHHHHcC
Q psy15811 493 ----RPSHVSTLVRCIKQSHPTVQTIVYPNK------------GGVWDSVHMKWLDT--EDEYSILH----YVPQWLEEG 550 (581)
Q Consensus 493 ----~p~~~~~~l~~l~~~~~~~pl~~ypNa------------g~~~~~~~~~~~~~--~~~~~~~~----~~~~w~~~G 550 (581)
+...|..+++.|+..+ ..++..--+ |.++-. ...+.++ .+...+.. .+..-.+.|
T Consensus 109 ~~T~~~~~m~~vm~~l~~~g--L~fvDS~Ts~~S~a~~~A~~~gvp~~~-rdvFLD~~~~~~~~I~~ql~~a~~~A~~~G 185 (245)
T 2nly_A 109 KIVENEKIMRAILEVVKEKN--AFIIDSGTSPHSLIPQLAEELEVPYAT-RSIFLDNTHSSRKEVIKNMRKLAKKAKQGS 185 (245)
T ss_dssp TGGGCHHHHHHHHHHHHHTT--CEEEECCCCSSCSHHHHHHHTTCCEEE-CCEESCCTTCCHHHHHHHHHHHHHHHHTTS
T ss_pred chhcCHHHHHHHHHHHHHCC--CEEEcCCCCcccHHHHHHHHcCCCeEE-eeEECCCCCCCHHHHHHHHHHHHHHHhhcC
Confidence 3445777788888753 343333211 111111 1234444 23444433 333345567
Q ss_pred -CcEEeecCCCchH---HHHHHHHHHh
Q psy15811 551 -VNIIGGCCEVTSY---EIQQMRIMID 573 (581)
Q Consensus 551 -~~iiGGCCGt~P~---hI~al~~~l~ 573 (581)
+..||= ..|+ -|++|.+.+.
T Consensus 186 ~aIaIGh---p~p~~~~Ti~aL~~~~~ 209 (245)
T 2nly_A 186 EPIGIGH---VGVRGDETYAGIRSMLD 209 (245)
T ss_dssp CCEEEEE---CSTTHHHHHHHHGGGHH
T ss_pred cEEEEEC---CCCCchhHHHHHHHHhh
Confidence 666775 4555 7888876554
No 390
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=34.99 E-value=3e+02 Score=26.56 Aligned_cols=138 Identities=14% Similarity=0.073 Sum_probs=72.9
Q ss_pred HHHHHHHhCCCCEEEecc----cCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEE
Q psy15811 412 PNVEALVRAGVDYLALET----IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET----~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~i 487 (581)
++++.+.+.|+|+|=+-. .+...|+.-++..+++..++| +|+-. .+-+-++.+++.+ .+..
T Consensus 29 ~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~~~~p--isIDT------~~~~v~~aAl~a~-----~Ga~-- 93 (262)
T 1f6y_A 29 EWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVSNLT--LCLDS------TNIKAIEAGLKKC-----KNRA-- 93 (262)
T ss_dssp HHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTTCCSE--EEEEC------SCHHHHHHHHHHC-----SSCE--
T ss_pred HHHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHHhCCCe--EEEeC------CCHHHHHHHHhhC-----CCCC--
Confidence 455556678999986653 455778888888888754555 45411 1222233333322 2334
Q ss_pred EECCCC--CccchHHHHHHHhhCCCCeEEEeeC--CCCCcccccccccCCcCHHHHHHHHHHHHHcCCc---EEe--ec-
Q psy15811 488 GVNCVR--PSHVSTLVRCIKQSHPTVQTIVYPN--KGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVN---IIG--GC- 557 (581)
Q Consensus 488 GiNC~~--p~~~~~~l~~l~~~~~~~pl~~ypN--ag~~~~~~~~~~~~~~~~~~~~~~~~~w~~~G~~---iiG--GC- 557 (581)
-||=++ .+.+..+++.++.. +.|+++.++ .|.+.+.. ...+.+.+.+....+.|+. ||= |.
T Consensus 94 iINdvs~~~d~~~~~~~~~a~~--~~~vvlmh~~~~G~p~t~~-------~~~~~~~~~~~~a~~~Gi~~~~IilDPg~g 164 (262)
T 1f6y_A 94 MINSTNAEREKVEKLFPLAVEH--GAALIGLTMNKTGIPKDSD-------TRLAFAMELVAAADEFGLPMEDLYIDPLIL 164 (262)
T ss_dssp EEEEECSCHHHHHHHHHHHHHT--TCEEEEESCCSSCSCSSHH-------HHHHHHHHHHHHHHHHTCCGGGEEEECCCC
T ss_pred EEEECCCCcccHHHHHHHHHHh--CCcEEEEcCCCCCCCCCHH-------HHHHHHHHHHHHHHHCCCCcccEEEeCCCC
Confidence 355422 23333555656655 579999997 44332111 1133455566667788984 431 11
Q ss_pred -CCCchHHHHHHHHHHh
Q psy15811 558 -CEVTSYEIQQMRIMID 573 (581)
Q Consensus 558 -CGt~P~hI~al~~~l~ 573 (581)
-|++.+|-.++-+.++
T Consensus 165 ~~g~~~~~~~~~l~~l~ 181 (262)
T 1f6y_A 165 PANVAQDHAPEVLKTLQ 181 (262)
T ss_dssp CTTTCTTHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHH
Confidence 3566554444433333
No 391
>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1}
Probab=34.84 E-value=1.9e+02 Score=27.45 Aligned_cols=96 Identities=13% Similarity=0.112 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHCC-CcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEE
Q psy15811 153 WHRPNVEALVRAG-VDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 231 (581)
Q Consensus 153 ~~~~q~~~l~~~g-vD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~v 231 (581)
.|.+.++..++.| +|++=+|-... .+ .+..++. ...+++|+.--+ .++ +.+.+.+.++. ..|+|.+
T Consensus 79 ~~~~ll~~~~~~g~~d~iDvEl~~~-~~---~i~~~~~--~~kvI~S~Hdf~--~tp--~el~~~~~~~~---~~gaDiv 145 (231)
T 2ocz_A 79 EYVDIIKEINAIYNPDYIDFEYFTH-KS---VFQEMLD--FPNLILSYHNFE--ETP--ENLMEAFSEMT---KLAPRVV 145 (231)
T ss_dssp HHHHHHHHHHHHHCCSEEEEETTTT-GG---GGGGGTT--CSSEEEEEEESS--CCC--TTHHHHHHHHH---HTCCSEE
T ss_pred HHHHHHHHHHHcCCCCEEEEECCCC-HH---HHHHhhc--CCeEEEEecCCC--CCH--HHHHHHHHHHH---HcCCCEE
Confidence 3444555566666 99999997543 22 2333333 378999986432 233 55666666665 4788888
Q ss_pred EeCCC--ChhhHHHHHHHHHhh---CCCCceEEec
Q psy15811 232 GVNCV--RPSHVSTLVRCIKQS---HPTVQTIVYP 261 (581)
Q Consensus 232 GvNC~--~p~~~~~~l~~l~~~---~~~~p~~~~p 261 (581)
=+-+. .+++...+++..... ..+.|++.+.
T Consensus 146 Kia~~a~~~~D~l~ll~~~~~~~~~~~~~P~I~~~ 180 (231)
T 2ocz_A 146 KIAVMPQSEQDVLDLMNYTRGFKTLNPEQEFATIS 180 (231)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EEEeecCCHHHHHHHHHHHHHHhhccCCCCEEEEE
Confidence 87775 577777776654431 2567888773
No 392
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=34.80 E-value=46 Score=32.76 Aligned_cols=49 Identities=8% Similarity=0.068 Sum_probs=36.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEE
Q psy15811 401 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAW 452 (581)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~ 452 (581)
.+.+++.+.-.+.++.|.+.|+|+|++-....- ..+++.+|+..++||+
T Consensus 64 ~s~~~i~~~~~~~~~~L~~~g~d~IVIaCNTas---~~~l~~lr~~~~iPVi 112 (286)
T 2jfq_A 64 RPGEQVKQYTVEIARKLMEFDIKMLVIACNTAT---AVALEYLQKTLSISVI 112 (286)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHH---HHHHHHHHHHCSSEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCchh---HHHHHHHHHhCCCCEE
Confidence 678999999999999999999999998754431 1245666654567755
No 393
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=34.75 E-value=63 Score=32.25 Aligned_cols=62 Identities=18% Similarity=0.229 Sum_probs=39.4
Q ss_pred HHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCC
Q psy15811 157 NVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 235 (581)
Q Consensus 157 q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC 235 (581)
|++-.+++|+|+|++.+| +.++++.+++.++. ...+-+| + |.+++.+ ..+. ..|+|.|++-.
T Consensus 219 e~~eAl~aGaDiImLDn~-s~~~l~~av~~~~~--~v~leaS-----G-----GIt~~~i-~~~A---~tGVD~IsvGa 280 (300)
T 3l0g_A 219 QVEESLSNNVDMILLDNM-SISEIKKAVDIVNG--KSVLEVS-----G-----CVNIRNV-RNIA---LTGVDYISIGC 280 (300)
T ss_dssp HHHHHHHTTCSEEEEESC-CHHHHHHHHHHHTT--SSEEEEE-----S-----SCCTTTH-HHHH---TTTCSEEECGG
T ss_pred HHHHHHHcCCCEEEECCC-CHHHHHHHHHhhcC--ceEEEEE-----C-----CCCHHHH-HHHH---HcCCCEEEeCc
Confidence 344445689999999997 55888988888763 3333332 1 2333322 2222 47899999877
No 394
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=34.54 E-value=42 Score=32.39 Aligned_cols=49 Identities=4% Similarity=0.065 Sum_probs=37.9
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEE
Q psy15811 401 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAW 452 (581)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~ 452 (581)
-+.+++.+...+.++.|.+.|+|+|++-....- ..+++.+++..++||+
T Consensus 42 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTa~---~~~~~~lr~~~~iPvi 90 (255)
T 2jfz_A 42 KDPTTIKQFGLEALDFFKPHEIELLIVACNTAS---ALALEEMQKYSKIPIV 90 (255)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCCSCEEECCHHHH---HHTHHHHHHHCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhh---HHHHHHHHHhCCCCEE
Confidence 578999999999999999999999998764431 1246677765678866
No 395
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A*
Probab=34.52 E-value=79 Score=32.22 Aligned_cols=51 Identities=14% Similarity=0.146 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHhCC--CCEEEecc-----cCCHHHHHHHHHHHHhcCCCeEEEE-EEEc
Q psy15811 407 IAWHRPNVEALVRAG--VDYLALET-----IPAEKEALALVKLLREFPGQKAWLS-FSCK 458 (581)
Q Consensus 407 ~~~~~~~~~~l~~~g--vD~i~~ET-----~p~~~Ea~a~~~~~~~~~~~pv~iS-ft~~ 458 (581)
.+.+...++.|.+.| +|.|-+.. .|+..+.+.+++.+.. .++|++|| +.+.
T Consensus 201 ~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~p~~~~~~~~l~~~a~-~Gl~i~iTElDi~ 259 (356)
T 2uwf_A 201 RDDLYNLVKDLLEQGVPIDGVGHQSHIQIGWPSIEDTRASFEKFTS-LGLDNQVTELDMS 259 (356)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHT-TTCEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHCCCcccEEEEEEecCCCCCCHHHHHHHHHHHHh-cCCcEEEEecccc
Confidence 455778888888888 59997753 3788999999988887 59999999 5554
No 396
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=34.49 E-value=1.5e+02 Score=31.40 Aligned_cols=64 Identities=8% Similarity=0.003 Sum_probs=46.8
Q ss_pred HHHHHHHCCCcEEEEE-ccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCC
Q psy15811 157 NVEALVRAGVDYLALE-TIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 235 (581)
Q Consensus 157 q~~~l~~~gvD~l~~E-T~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC 235 (581)
|+.-....|+|.+++= |+-+..+++..++.+++. ++-+++-. .+.+++-.++ ..+++.||+|=
T Consensus 122 Qi~ea~~~GAD~ILLi~a~l~~~~l~~l~~~a~~l-gm~~LvEv-----------h~~eE~~~A~----~lga~iIGinn 185 (452)
T 1pii_A 122 QIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSL-EMGVLTEV-----------SNEEEQERAI----ALGAKVVGINN 185 (452)
T ss_dssp HHHHHHHTTCSEEEEETTTCCHHHHHHHHHHHHHT-TCEEEEEE-----------CSHHHHHHHH----HTTCSEEEEES
T ss_pred HHHHHHHcCCCEEEEEcccCCHHHHHHHHHHHHHc-CCeEEEEe-----------CCHHHHHHHH----HCCCCEEEEeC
Confidence 5666778999997665 666777888889999886 88777633 2345554443 36889999998
Q ss_pred C
Q psy15811 236 V 236 (581)
Q Consensus 236 ~ 236 (581)
.
T Consensus 186 r 186 (452)
T 1pii_A 186 R 186 (452)
T ss_dssp E
T ss_pred C
Confidence 4
No 397
>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A
Probab=34.39 E-value=1.8e+02 Score=27.33 Aligned_cols=101 Identities=19% Similarity=0.169 Sum_probs=56.8
Q ss_pred HHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEE
Q psy15811 410 HRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGV 489 (581)
Q Consensus 410 ~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGi 489 (581)
|.+.++...+. +|+|=+|-.. ......+.+.++. .+..+++|+.- -..+++-+.+.+.++.+.+. +. +.=|=+
T Consensus 73 ~~~ll~~~~~~-~d~iDvEl~~-~~~~~~l~~~~~~-~g~kvI~S~Hd--f~~tp~~~el~~~~~~~~~~-ga-ivKia~ 145 (219)
T 2egz_A 73 REELFEELSPL-SDYTDIELSS-RGLLVKLYNITKE-AGKKLIISYHN--FELTPPNWIIREVLREGYRY-GG-IPKIAV 145 (219)
T ss_dssp HHHHHHHHTTT-SSEEEEETTC-HHHHHHHHHHHHH-TTCEEEEEEEE--SSCCCCHHHHHHHHHHHHHT-TS-EEEEEE
T ss_pred HHHHHHHHHhc-CCEEEEEccC-CccHHHHHHHHHH-cCCEEEEEecC--CCCCcCHHHHHHHHHHHHHc-CC-EEEEEE
Confidence 34445555566 9999999754 2224456666666 57889999853 23344433455555555322 22 222333
Q ss_pred CCCCCccchHHHHHHHhhCCCCeEEEeeCC
Q psy15811 490 NCVRPSHVSTLVRCIKQSHPTVQTIVYPNK 519 (581)
Q Consensus 490 NC~~p~~~~~~l~~l~~~~~~~pl~~ypNa 519 (581)
...+++++..+++..+.. +.|++.+.-+
T Consensus 146 ~a~~~~D~l~ll~~~~~~--~~P~I~~~MG 173 (219)
T 2egz_A 146 KANSYEDVARLLCISRQV--EGEKILISMG 173 (219)
T ss_dssp ECSSHHHHHHHHHHHTTS--CSCBEEEEES
T ss_pred ccCCHHHHHHHHHHHHhC--CCCEEEEECC
Confidence 334555666666655443 4788877643
No 398
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=34.35 E-value=2.3e+02 Score=31.24 Aligned_cols=113 Identities=15% Similarity=0.098 Sum_probs=68.0
Q ss_pred CCCH---HHHHHHHHHHHHHHHhCCCCEEEec---cc-------------------CC-HHH---HHHHHHHHHhcC--C
Q psy15811 400 SMTE---ADLIAWHRPNVEALVRAGVDYLALE---TI-------------------PA-EKE---ALALVKLLREFP--G 448 (581)
Q Consensus 400 ~~~~---~~~~~~~~~~~~~l~~~gvD~i~~E---T~-------------------p~-~~E---a~a~~~~~~~~~--~ 448 (581)
.++. +++.+.|.+.++...++|.|.|=+= -. -+ ... +..+++++++.. +
T Consensus 145 ~~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~ 224 (690)
T 3k30_A 145 AMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGR 224 (690)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 4554 5556778888888889999998551 00 11 122 334555555432 5
Q ss_pred CeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECCCC------------CccchHHHHHHHhhCCCCeEEEe
Q psy15811 449 QKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVR------------PSHVSTLVRCIKQSHPTVQTIVY 516 (581)
Q Consensus 449 ~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~~------------p~~~~~~l~~l~~~~~~~pl~~y 516 (581)
.||.+-++..+. ...|.+.++++..+..+.. .++++.+...+ +......++.+++.. ++|++.-
T Consensus 225 ~~v~~r~s~~~~--~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~pvi~~ 300 (690)
T 3k30_A 225 AAVACRITVEEE--IDGGITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLT-TKPVVGV 300 (690)
T ss_dssp SEEEEEEECCCC--STTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGC-SSCEEEC
T ss_pred ceEEEEECcccc--CCCCCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHc-CCeEEEe
Confidence 688888876443 3567777777665544444 57887777621 112235666677665 6887763
No 399
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A
Probab=34.30 E-value=2.1e+02 Score=30.76 Aligned_cols=51 Identities=12% Similarity=0.145 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHCC--CcEEEEE-----ccCCHHHHHHHHHHHHhcCCCcEEEE-EEEc
Q psy15811 151 IAWHRPNVEALVRAG--VDYLALE-----TIPAEKEALALVKLLREFPGQKAWLS-FSCK 202 (581)
Q Consensus 151 ~~~~~~q~~~l~~~g--vD~l~~E-----T~~~~~E~~aa~~a~~~~~~~pv~is-ft~~ 202 (581)
.+.+.++++.|.+.| +|.|-+. ..++..+++.+++.+.+. ++||+|| +-+.
T Consensus 359 ~~~~~~lVk~l~~~GvpIDGIG~Q~H~~~~~p~~~~i~~~L~~~a~l-GlpI~ITElDv~ 417 (530)
T 1us2_A 359 TTKMVDMVKDFQARSIPIDGVGFQMHVCMNYPSIANISAAMKKVVDL-GLLVKITELDVA 417 (530)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTT-TCEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHCCCceeEEEEeeecCCCCCCHHHHHHHHHHHHhc-CCeEEEEeCccC
Confidence 455778888899888 5999775 347889999999988876 9999998 5554
No 400
>1t7l_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; TIM barrel, methyltetrahydrofolate, zinc; 2.00A {Thermotoga maritima} PDB: 3bq5_A 3bq6_A 1xdj_A 1xr2_A* 1xpg_A*
Probab=34.16 E-value=2.4e+02 Score=31.90 Aligned_cols=134 Identities=11% Similarity=0.114 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEe------cccCC-----HHHHHHHHHHHHhc----CCCeEEEEEEEcCCCcCCCCC
Q psy15811 403 EADLIAWHRPNVEALVRAGVDYLAL------ETIPA-----EKEALALVKLLREF----PGQKAWLSFSCKDDTHTSHGE 467 (581)
Q Consensus 403 ~~~~~~~~~~~~~~l~~~gvD~i~~------ET~p~-----~~Ea~a~~~~~~~~----~~~pv~iSft~~~~~~l~~G~ 467 (581)
.+++...|++.++.|.++|++.|=+ +.+|. ......++++++.. .+..+.+|+|+-+-
T Consensus 584 l~dLA~ayreeI~~L~~AGa~~IQIDEPaL~~~L~~~~~d~~~~l~~a~~aln~a~gv~~~~~I~lH~C~G~~------- 656 (766)
T 1t7l_A 584 AYQIALAINEEVKDLEEAGIKIVQIDEPAFREKAPIKKSKWPEYFEWAINAFNLAANARPETQIHAHMCYSDF------- 656 (766)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEECTHHHHTSCSSGGGHHHHHHHHHHHHHHHTCCCTTSEEEEECCCSCC-------
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcCCcccccCCCcchhHHHHHHHHHHHHHHhhcCCCCceEEEEEecCch-------
Confidence 4678889999999999999998743 23333 12334555555431 24567777765321
Q ss_pred cHHHHHHHHHhhCCCCceEEEECCC-CCccchHHHHHHHhh---CCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHH
Q psy15811 468 LISSAVTSCLLANPDQIQAIGVNCV-RPSHVSTLVRCIKQS---HPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYV 543 (581)
Q Consensus 468 ~~~~~~~~l~~~~~~~~~~iGiNC~-~p~~~~~~l~~l~~~---~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~ 543 (581)
.+.+..+ ....+++|++-.. +... +++.+... ...+-++++ +.. ..|. .+++.+.+.+
T Consensus 657 --~di~~~L---~~l~VD~IsLE~~Rs~~e---lL~~l~~~p~~~k~L~lGVV-------D~r-n~~v--ed~EeI~~rI 718 (766)
T 1t7l_A 657 --NEIIEYI---HQLEFDVISIEASRSKGE---IISAFENFKGWIKQIGVGVW-------DIH-SPAV--PSINEMREIV 718 (766)
T ss_dssp --TTTHHHH---TTSCCSEEEEECTTTTTG---GGHHHHTSTTCCSEEEEECS-------CTT-SCSC--CCHHHHHHHH
T ss_pred --HHHHHHH---HcCCCCEEEEecCCCchh---HHHHHHhccccCCeEEEEEE-------CCC-CCCC--CCHHHHHHHH
Confidence 1344555 3557899999973 3333 33334321 101222222 221 2343 3477888888
Q ss_pred HHHHHc-CCc--EEeecCCCc
Q psy15811 544 PQWLEE-GVN--IIGGCCEVT 561 (581)
Q Consensus 544 ~~w~~~-G~~--iiGGCCGt~ 561 (581)
++..+. |.. +|.=-||-.
T Consensus 719 ~~a~~~Vg~erL~VsPdCGL~ 739 (766)
T 1t7l_A 719 ERVLRVLPKELIWINPDCGLK 739 (766)
T ss_dssp HHHTTTSCGGGEEEECSSCCT
T ss_pred HHHHHhcCcccEEEeCCCCCC
Confidence 777654 654 788889865
No 401
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=33.95 E-value=2.7e+02 Score=32.46 Aligned_cols=72 Identities=10% Similarity=-0.009 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHCCCcEEEEEcc---------------CCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHH
Q psy15811 152 AWHRPNVEALVRAGVDYLALETI---------------PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSA 216 (581)
Q Consensus 152 ~~~~~q~~~l~~~gvD~l~~ET~---------------~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~ 216 (581)
+.|.+.++.+.++|+|+|-+--- .+.+-+..+++++++..++||++-++- +.+++.+.
T Consensus 648 ~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~-------~~~~~~~~ 720 (1025)
T 1gte_A 648 NDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTP-------NVTDIVSI 720 (1025)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEECS-------CSSCHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeCC-------ChHHHHHH
Confidence 34556677777899999977421 355667778888887668999987632 33456666
Q ss_pred HHHHHhhCCCCceEEEe
Q psy15811 217 VTSCLLANPDQIQAIGV 233 (581)
Q Consensus 217 ~~~~~~~~~~~~~~vGv 233 (581)
+..+.+ .|+++|-+
T Consensus 721 a~~~~~---~G~d~i~v 734 (1025)
T 1gte_A 721 ARAAKE---GGADGVTA 734 (1025)
T ss_dssp HHHHHH---HTCSEEEE
T ss_pred HHHHHH---cCCCEEEE
Confidence 666653 56777766
No 402
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=33.54 E-value=89 Score=30.94 Aligned_cols=62 Identities=15% Similarity=0.127 Sum_probs=39.0
Q ss_pred HHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCC
Q psy15811 157 NVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 235 (581)
Q Consensus 157 q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC 235 (581)
|++-.+++|+|+|.+.+| +.++++.+++.++. ..++.+|- |- +-+++.+ +. ..|+|.|++-.
T Consensus 210 ea~eAl~aGaD~I~LDn~-~~~~l~~av~~~~~--~v~ieaSG-----GI--t~~~i~~----~a---~tGVD~IsvGa 271 (287)
T 3tqv_A 210 ELNQAIAAKADIVMLDNF-SGEDIDIAVSIARG--KVALEVSG-----NI--DRNSIVA----IA---KTGVDFISVGA 271 (287)
T ss_dssp HHHHHHHTTCSEEEEESC-CHHHHHHHHHHHTT--TCEEEEES-----SC--CTTTHHH----HH---TTTCSEEECSH
T ss_pred HHHHHHHcCCCEEEEcCC-CHHHHHHHHHhhcC--CceEEEEC-----CC--CHHHHHH----HH---HcCCCEEEECh
Confidence 344445689999999996 55788888888763 45555432 21 1233332 22 47899998854
No 403
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=33.52 E-value=66 Score=33.43 Aligned_cols=81 Identities=21% Similarity=0.195 Sum_probs=53.9
Q ss_pred HHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHh----cCCCeEEEEEEEc--------------------CCCcCCC
Q psy15811 410 HRPNVEALVRAGVDYLALETIPAEKEALALVKLLRE----FPGQKAWLSFSCK--------------------DDTHTSH 465 (581)
Q Consensus 410 ~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~----~~~~pv~iSft~~--------------------~~~~l~~ 465 (581)
--.|+..|.++|+|++=+ |+|+..+++++-+.-++ -..+|++.-|.|+ +.|.+.+
T Consensus 40 Tv~QI~~L~~aG~eiVRv-aVp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNig~ 118 (406)
T 4g9p_A 40 TTAQVLELHRAGSEIVRL-TVNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGR 118 (406)
T ss_dssp HHHHHHHHHHHTCSEEEE-ECCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSSCS
T ss_pred HHHHHHHHHHcCCCEEEE-ecCCHHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHHHHHHHHhHHhhcccCccccCc
Confidence 347889999999999987 58998887766555443 2578988766654 1233433
Q ss_pred C----CcHHHHHHHHHhhCCCCceEEEECCCC
Q psy15811 466 G----ELISSAVTSCLLANPDQIQAIGVNCVR 493 (581)
Q Consensus 466 G----~~~~~~~~~l~~~~~~~~~~iGiNC~~ 493 (581)
+ +-+.++++.+.+. .-+.=||+|..+
T Consensus 119 ~~k~~e~~~~vv~~ak~~--~~pIRIGVN~GS 148 (406)
T 4g9p_A 119 GRHKDEHFAEMIRIAMDL--GKPVRIGANWGS 148 (406)
T ss_dssp THHHHHHHHHHHHHHHHH--TCCEEEEEEGGG
T ss_pred cccHHHHHHHHHHHHHHc--cCCceecccccc
Confidence 3 2355666666333 345779999944
No 404
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=33.07 E-value=1.1e+02 Score=30.63 Aligned_cols=76 Identities=16% Similarity=0.122 Sum_probs=52.9
Q ss_pred HHHHHHHhCCCCEEE--ecccC-----------CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHh
Q psy15811 412 PNVEALVRAGVDYLA--LETIP-----------AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLL 478 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~--~ET~p-----------~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~ 478 (581)
+.++.|.++|+|.+. +||.. +..+...+++.+++ .++++..+|-+- .|++.++.++.+..
T Consensus 153 e~l~~L~~aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~-~Gi~v~~~~i~G------lget~e~~~~~l~~ 225 (350)
T 3t7v_A 153 ATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQ-QGYCVEDGILTG------VGNDIESTILSLRG 225 (350)
T ss_dssp HHHHHHHHTTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHH-HTCEEEEEEEES------SSCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHH-cCCeEccceEee------cCCCHHHHHHHHHH
Confidence 678888999999764 67763 35666677777777 488877776552 27788877776654
Q ss_pred hCCCCceEEEECCCCC
Q psy15811 479 ANPDQIQAIGVNCVRP 494 (581)
Q Consensus 479 ~~~~~~~~iGiNC~~p 494 (581)
....++..++++...|
T Consensus 226 l~~l~~~~v~~~~f~p 241 (350)
T 3t7v_A 226 MSTNDPDMVRVMTFLP 241 (350)
T ss_dssp HHHTCCSEEEEEECCC
T ss_pred HHhCCCCEEEecceee
Confidence 4455677788887444
No 405
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=33.03 E-value=59 Score=31.70 Aligned_cols=49 Identities=8% Similarity=0.039 Sum_probs=36.1
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEE
Q psy15811 401 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAW 452 (581)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~ 452 (581)
.+.+++.++..+.++.|.+.|+|+|++-....- ..+++.+++..++||+
T Consensus 54 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTas---~~~l~~lr~~~~iPvi 102 (273)
T 2oho_A 54 RPKKQIKEYTWELVNFLLTQNVKMIVFACNTAT---AVAWEEVKAALDIPVL 102 (273)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHH---HHHHHHHHHHCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchHh---HHHHHHHHHhCCCCEE
Confidence 578999999999999999999999998654431 1235566654567755
No 406
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=33.01 E-value=2.1e+02 Score=30.18 Aligned_cols=83 Identities=11% Similarity=0.073 Sum_probs=52.2
Q ss_pred CCCcEEEEEcc-CCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCCChhhHH
Q psy15811 164 AGVDYLALETI-PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVS 242 (581)
Q Consensus 164 ~gvD~l~~ET~-~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~~p~~~~ 242 (581)
-++|++.+.-. .+.+++..+++.+++..++|+.+ + +.+.+.++++++... +..++..+++ .+.+.
T Consensus 126 ~~~D~ial~~~s~dpe~~~~vVk~V~e~~dvPL~I----D----S~dpevleaALea~a---~~~plI~sat---~dn~e 191 (446)
T 4djd_C 126 YTIQAIAIRHDADDPAAFKAAVASVAAATQLNLVL----M----ADDPDVLKEALAGVA---DRKPLLYAAT---GANYE 191 (446)
T ss_dssp ECCCEEEEECCSSSTHHHHHHHHHHHTTCCSEEEE----E----CSCHHHHHHHHGGGG---GGCCEEEEEC---TTTHH
T ss_pred ccCcEEEEEeCCCCHHHHHHHHHHHHHhCCCCEEE----e----cCCHHHHHHHHHhhc---CcCCeeEecc---hhhHH
Confidence 38999998876 57888999999998877888665 1 112233333333221 3456777776 33444
Q ss_pred HHHHHHHhhCCCCceEEecC
Q psy15811 243 TLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 243 ~~l~~l~~~~~~~p~~~~pn 262 (581)
..+....+ -+.|+++..|
T Consensus 192 ~m~~lAa~--y~~pVi~~~~ 209 (446)
T 4djd_C 192 AMTALAKE--NNCPLAVYGN 209 (446)
T ss_dssp HHHHHHHH--TTCCEEEECS
T ss_pred HHHHHHHH--cCCcEEEEec
Confidence 44444444 4778888866
No 407
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=32.79 E-value=4.2e+02 Score=27.17 Aligned_cols=78 Identities=18% Similarity=0.153 Sum_probs=44.2
Q ss_pred HHHHHHHHHHCC------CcEEEEEc--------cCC-----HHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHH
Q psy15811 154 HRPNVEALVRAG------VDYLALET--------IPA-----EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELIS 214 (581)
Q Consensus 154 ~~~q~~~l~~~g------vD~l~~ET--------~~~-----~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~ 214 (581)
+.+.++.|.+.| +|+|-+=. .+. ...-...++.+|+.-+.||++. |.. +.+
T Consensus 262 ~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~~------G~i----~~~ 331 (402)
T 2hsa_B 262 GLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFICS------GGY----TRE 331 (402)
T ss_dssp HHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEEE------SSC----CHH
T ss_pred HHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEEe------CCC----CHH
Confidence 556677777888 99986621 110 1011233445555447898863 333 355
Q ss_pred HHHHHHHhhCCCCceEEEeCC---CChhhHHHH
Q psy15811 215 SAVTSCLLANPDQIQAIGVNC---VRPSHVSTL 244 (581)
Q Consensus 215 ~~~~~~~~~~~~~~~~vGvNC---~~p~~~~~~ 244 (581)
++.+.+. ..++|+|++-= ..|+...++
T Consensus 332 ~a~~~l~---~g~aD~V~igR~~l~dP~l~~k~ 361 (402)
T 2hsa_B 332 LGIEAVA---QGDADLVSYGRLFISNPDLVMRI 361 (402)
T ss_dssp HHHHHHH---TTSCSEEEESHHHHHCTTHHHHH
T ss_pred HHHHHHH---CCCCceeeecHHHHhCchHHHHH
Confidence 5554443 45689998864 257655544
No 408
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=32.62 E-value=3.8e+02 Score=26.61 Aligned_cols=142 Identities=12% Similarity=0.090 Sum_probs=76.8
Q ss_pred HHHHHHHhCCCCEEEecccCC--HHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEE
Q psy15811 412 PNVEALVRAGVDYLALETIPA--EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGV 489 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~p~--~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGi 489 (581)
+.++.|.+.|+|.|=+- +|. ..+...+.+..+...+.. +..++ +.+ -..++.+++.+ ...++..|.+
T Consensus 32 ~ia~~L~~~Gv~~IE~g-~p~~~~~d~e~v~~i~~~~~~~~-i~~l~-r~~-----~~~i~~a~~al---~~ag~~~v~i 100 (325)
T 3eeg_A 32 IVAKALDELGVDVIEAG-FPVSSPGDFNSVVEITKAVTRPT-ICALT-RAK-----EADINIAGEAL---RFAKRSRIHT 100 (325)
T ss_dssp HHHHHHHHHTCSEEEEE-CTTSCHHHHHHHHHHHHHCCSSE-EEEEC-CSC-----HHHHHHHHHHH---TTCSSEEEEE
T ss_pred HHHHHHHHcCCCEEEEe-CCCCCHhHHHHHHHHHHhCCCCE-EEEee-cCC-----HHHHHHHHHhh---cccCCCEEEE
Confidence 44556677899976432 453 555555544444433333 33332 211 12355566655 4556666655
Q ss_pred -------------CCCCCcc---chHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHHHcCCcE
Q psy15811 490 -------------NCVRPSH---VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNI 553 (581)
Q Consensus 490 -------------NC~~p~~---~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~~G~~i 553 (581)
||+-.+. +...++..+..+ ..+.+.+ ++ . ...+++.+.+.++...+.|+..
T Consensus 101 ~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g--~~v~f~~----~d-~------~~~~~~~~~~~~~~~~~~G~~~ 167 (325)
T 3eeg_A 101 GIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVV--HEVEFFC----ED-A------GRADQAFLARMVEAVIEAGADV 167 (325)
T ss_dssp EEECSHHHHC----CCCTTGGGTTHHHHHHHHTTS--SEEEEEE----ET-G------GGSCHHHHHHHHHHHHHHTCSE
T ss_pred EecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC--CEEEEEc----cc-c------ccchHHHHHHHHHHHHhcCCCE
Confidence 3432222 233444444443 3332211 11 1 1345788899999999999988
Q ss_pred EeecC---CCchHHHHHHHHHHhcccC
Q psy15811 554 IGGCC---EVTSYEIQQMRIMIDEFNT 577 (581)
Q Consensus 554 iGGCC---Gt~P~hI~al~~~l~~~~~ 577 (581)
|.=|= ..+|..+..+-+.++..-|
T Consensus 168 i~l~DT~G~~~P~~v~~lv~~l~~~~~ 194 (325)
T 3eeg_A 168 VNIPDTTGYMLPWQYGERIKYLMDNVS 194 (325)
T ss_dssp EECCBSSSCCCHHHHHHHHHHHHHHCS
T ss_pred EEecCccCCcCHHHHHHHHHHHHHhCC
Confidence 75442 3689999988777765433
No 409
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=32.58 E-value=2.1e+02 Score=29.08 Aligned_cols=115 Identities=11% Similarity=0.042 Sum_probs=64.2
Q ss_pred CCCCH---HHHHHHHHHHHHHHHHCCCcEEEEEc--------c--C------C---------HHHHHHHHHHHHhcC--C
Q psy15811 143 DSMTE---ADLIAWHRPNVEALVRAGVDYLALET--------I--P------A---------EKEALALVKLLREFP--G 192 (581)
Q Consensus 143 ~~~~~---~~~~~~~~~q~~~l~~~gvD~l~~ET--------~--~------~---------~~E~~aa~~a~~~~~--~ 192 (581)
+.+|. +++.+.|.+-++...++|.|.|=+=- | | + ..-+..+++++|+.. +
T Consensus 149 ~~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~ 228 (364)
T 1vyr_A 149 RALELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSAD 228 (364)
T ss_dssp EECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGG
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCC
Confidence 34554 45667777777778899999985421 0 1 1 122455667776542 4
Q ss_pred CcEEEEEEEcCCCc-C-CCCCCHHHHHHHHHhhCCCCceEEEeCCC----ChhhHHHHHHHHHhhCCCCceEE
Q psy15811 193 QKAWLSFSCKDDTH-T-SHGELISSAVTSCLLANPDQIQAIGVNCV----RPSHVSTLVRCIKQSHPTVQTIV 259 (581)
Q Consensus 193 ~pv~isft~~~~g~-l-~~G~~~~~~~~~~~~~~~~~~~~vGvNC~----~p~~~~~~l~~l~~~~~~~p~~~ 259 (581)
||.+-++..+.-. + .++.++++++..+..+...+++.|-+-+. .|..-.+.++.+++. .++|++.
T Consensus 229 -~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~-~~iPvi~ 299 (364)
T 1vyr_A 229 -RIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRER-FHGVIIG 299 (364)
T ss_dssp -GEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHH-CCSEEEE
T ss_pred -cEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHH-CCCCEEE
Confidence 8888777642110 0 23456666543332222578888887663 111113456677765 5666554
No 410
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A
Probab=32.58 E-value=83 Score=31.58 Aligned_cols=52 Identities=13% Similarity=0.151 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHCC--CcEEEEEc-----cCCHHHHHHHHHHHHhcCCCcEEEE-EEEc
Q psy15811 150 LIAWHRPNVEALVRAG--VDYLALET-----IPAEKEALALVKLLREFPGQKAWLS-FSCK 202 (581)
Q Consensus 150 ~~~~~~~q~~~l~~~g--vD~l~~ET-----~~~~~E~~aa~~a~~~~~~~pv~is-ft~~ 202 (581)
-.+.+..+++.|.+.| +|.|-+.. .++..+++.+++.+.+. ++||+|| +.+.
T Consensus 186 k~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~~~~~~~~~~l~~~a~~-G~pi~iTEldi~ 245 (331)
T 1n82_A 186 KREKIFALVKSLRDKGIPIHGIGMQAHWSLTRPSLDEIRAAIERYASL-GVVLHITELDVS 245 (331)
T ss_dssp HHHHHHHHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHHHHHTT-TCEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHHCCCccceEEeceecCCCCCCHHHHHHHHHHHHhc-CCeEEEEeceec
Confidence 3566778888898988 59998763 36889999999988875 8999998 5554
No 411
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=32.53 E-value=2e+02 Score=29.44 Aligned_cols=100 Identities=18% Similarity=0.238 Sum_probs=59.0
Q ss_pred HHHHHHHHHCCCcEEEEE-ccCC--------------HHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHH
Q psy15811 155 RPNVEALVRAGVDYLALE-TIPA--------------EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTS 219 (581)
Q Consensus 155 ~~q~~~l~~~gvD~l~~E-T~~~--------------~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~ 219 (581)
..-++++.++|+|.|-+- ..++ ++.+..+++.+++. +.. +.|++++.++. +-+.+.+.+++
T Consensus 90 ~~a~~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~-g~~--v~~~~ed~~r~-~~~~~~~~~~~ 165 (370)
T 3rmj_A 90 RQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREY-TDD--VEFSCEDALRS-EIDFLAEICGA 165 (370)
T ss_dssp HHHHHHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTT-CSC--EEEEEETGGGS-CHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCE--EEEecCCCCcc-CHHHHHHHHHH
Confidence 344566777999987432 3332 22334455666654 443 56788765544 22233344444
Q ss_pred HHhhCCCCceEEEeCCC----ChhhHHHHHHHHHhhCCC---CceEEec
Q psy15811 220 CLLANPDQIQAIGVNCV----RPSHVSTLVRCIKQSHPT---VQTIVYP 261 (581)
Q Consensus 220 ~~~~~~~~~~~vGvNC~----~p~~~~~~l~~l~~~~~~---~p~~~~p 261 (581)
+. ..|++.|.+-=+ .|..+..+++.+++.... .||.+..
T Consensus 166 ~~---~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~ 211 (370)
T 3rmj_A 166 VI---EAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHC 211 (370)
T ss_dssp HH---HHTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEEC
T ss_pred HH---HcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEe
Confidence 44 467787776554 499999999999976333 5666554
No 412
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=32.43 E-value=1.3e+02 Score=30.21 Aligned_cols=82 Identities=12% Similarity=0.137 Sum_probs=44.2
Q ss_pred HHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCC--CCHHHHHHHHHhhCCCCceEEEeCCC
Q psy15811 159 EALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG--ELISSAVTSCLLANPDQIQAIGVNCV 236 (581)
Q Consensus 159 ~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G--~~~~~~~~~~~~~~~~~~~~vGvNC~ 236 (581)
+.|.+.|+|.+.++.-.++.+++.. ..+ .+.++--+++ .++.| +.+.+.+..+.+....+-..++..|+
T Consensus 261 ~~l~~~g~d~~~~d~~~d~~~~~~~------~g~-~~~l~Gnldp--~~l~~~~e~i~~~v~~~l~~~~~~g~I~~~g~g 331 (353)
T 1j93_A 261 ERLPLTGVDVVSLDWTVDMADGRRR------LGP-NVAIQGNVDP--GVLFGSKEFITNRINDTVKKAGKGKHILNLGHG 331 (353)
T ss_dssp GGGGGGCCSEEECCTTSCHHHHHHH------TCS-SSEEECCBCG--GGGGSCHHHHHHHHHHHHHHHCSSSEEBCBSSC
T ss_pred HHHHhcCCCEEEeCCCCCHHHHHHH------cCC-CeEEEecCCH--HHHcCCHHHHHHHHHHHHHHhCCCCEEEeCCCC
Confidence 3456789999999987788776532 222 2344444444 23333 23444444443321123467777785
Q ss_pred -C----hhhHHHHHHHHH
Q psy15811 237 -R----PSHVSTLVRCIK 249 (581)
Q Consensus 237 -~----p~~~~~~l~~l~ 249 (581)
. |+++..+++.++
T Consensus 332 i~~~~~~enl~a~ve~v~ 349 (353)
T 1j93_A 332 IKVGTPEENFAHFFEIAK 349 (353)
T ss_dssp CCTTCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHH
Confidence 2 455555555444
No 413
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A
Probab=32.38 E-value=89 Score=32.14 Aligned_cols=52 Identities=17% Similarity=0.194 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHhCCC--CEEEecc-----cCCHHHHHHHHHHHHhcCCCeEEEE-EEEcC
Q psy15811 407 IAWHRPNVEALVRAGV--DYLALET-----IPAEKEALALVKLLREFPGQKAWLS-FSCKD 459 (581)
Q Consensus 407 ~~~~~~~~~~l~~~gv--D~i~~ET-----~p~~~Ea~a~~~~~~~~~~~pv~iS-ft~~~ 459 (581)
.+.+...++.|.+.|+ |.|-+.. .|+..+.+..++.+.. .++|++|| +.+..
T Consensus 211 ~~~~~~~v~~l~~~g~piDgIG~Q~H~~~~~p~~~~~~~~l~~~a~-lGlpI~iTElDi~~ 270 (379)
T 1r85_A 211 RTALYNLVKQLKEEGVPIDGIGHQSHIQIGWPSEAEIEKTINMFAA-LGLDNQITELDVSM 270 (379)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEECSSSSCHHHHHHHHHHHHH-TTCEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHCCCceeEEEEeEEecCCCCCHHHHHHHHHHHHh-cCCeEEEeeccccC
Confidence 3566778888888885 9998853 4788899999988887 59999999 55653
No 414
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=32.24 E-value=1.5e+02 Score=35.25 Aligned_cols=102 Identities=8% Similarity=0.108 Sum_probs=66.2
Q ss_pred HHHHHHHCCCcEE-EEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCC----CCHHHHHHHHHhhCCCCceEE
Q psy15811 157 NVEALVRAGVDYL-ALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG----ELISSAVTSCLLANPDQIQAI 231 (581)
Q Consensus 157 q~~~l~~~gvD~l-~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G----~~~~~~~~~~~~~~~~~~~~v 231 (581)
-++..+++|+|.+ +|=...+++.++..++.+++. +..+-..+++. ++..++ .+++-++..+..+...|++.|
T Consensus 650 ~i~~a~~~g~d~irif~sl~~~~~~~~~i~~~~~~-g~~v~~~i~~~--~~~~d~~r~~~~~~~~~~~~~~~~~~Ga~~i 726 (1165)
T 2qf7_A 650 FVRQAAKGGIDLFRVFDCLNWVENMRVSMDAIAEE-NKLCEAAICYT--GDILNSARPKYDLKYYTNLAVELEKAGAHII 726 (1165)
T ss_dssp HHHHHHHHTCCEEEEECTTCCGGGGHHHHHHHHHT-TCEEEEEEECC--SCTTCTTSGGGCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHhcCcCEEEEEeeHHHHHHHHHHHHHHHhc-cceEEEEEEEe--ccccCCCCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 5666778899996 455667888888889998876 55444333332 111222 344444433333335788888
Q ss_pred EeCCC----ChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 232 GVNCV----RPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 232 GvNC~----~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
.+-=+ .|..+..+++.+++. .++||.+...
T Consensus 727 ~l~DT~G~~~P~~~~~lv~~l~~~-~~~~i~~H~H 760 (1165)
T 2qf7_A 727 AVKDMAGLLKPAAAKVLFKALREA-TGLPIHFHTH 760 (1165)
T ss_dssp EEEETTCCCCHHHHHHHHHHHHHH-CSSCEEEEEC
T ss_pred EEeCccCCcCHHHHHHHHHHHHHh-cCCeEEEEEC
Confidence 77533 499999999999986 5788886653
No 415
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=32.08 E-value=91 Score=29.69 Aligned_cols=84 Identities=11% Similarity=0.161 Sum_probs=51.0
Q ss_pred HHHHHHHhCCCCEEEec-----ccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceE
Q psy15811 412 PNVEALVRAGVDYLALE-----TIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQA 486 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~E-----T~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~ 486 (581)
+.++.+ ++|+|.+=+- .+|++.....+++.+|+.+++|+-+++-+.+.++ .++.+++ .+++.
T Consensus 17 ~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~~~~~dvhLmv~dp~~-----~i~~~~~-------aGAd~ 83 (231)
T 3ctl_A 17 EQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRPQD-----YIAQLAR-------AGADF 83 (231)
T ss_dssp HHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTCCSCEEEEEESSCGGG-----THHHHHH-------HTCSE
T ss_pred HHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhccCCcEEEEEEecCHHH-----HHHHHHH-------cCCCE
Confidence 566777 7898864222 3477666777899999878899999998865322 1222211 14455
Q ss_pred EEECCCC-CccchHHHHHHHhhC
Q psy15811 487 IGVNCVR-PSHVSTLVRCIKQSH 508 (581)
Q Consensus 487 iGiNC~~-p~~~~~~l~~l~~~~ 508 (581)
|-+-+-. ..++..+++.++..+
T Consensus 84 itvh~Ea~~~~~~~~i~~i~~~G 106 (231)
T 3ctl_A 84 ITLHPETINGQAFRLIDEIRRHD 106 (231)
T ss_dssp EEECGGGCTTTHHHHHHHHHHTT
T ss_pred EEECcccCCccHHHHHHHHHHcC
Confidence 5555411 124566666666654
No 416
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=32.04 E-value=1.5e+02 Score=28.22 Aligned_cols=87 Identities=13% Similarity=0.112 Sum_probs=53.7
Q ss_pred HHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCC
Q psy15811 156 PNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 235 (581)
Q Consensus 156 ~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC 235 (581)
+|++..+++|+|++..- ... ...++++++. ++|++.- -.++.++..++ ..|++.|.+==
T Consensus 97 ~~a~~Ai~AGA~fIvsP---~~~--~~vi~~~~~~-gi~~ipG-----------v~TptEi~~A~----~~Gad~vK~FP 155 (232)
T 4e38_A 97 EQALAAKEAGATFVVSP---GFN--PNTVRACQEI-GIDIVPG-----------VNNPSTVEAAL----EMGLTTLKFFP 155 (232)
T ss_dssp HHHHHHHHHTCSEEECS---SCC--HHHHHHHHHH-TCEEECE-----------ECSHHHHHHHH----HTTCCEEEECS
T ss_pred HHHHHHHHcCCCEEEeC---CCC--HHHHHHHHHc-CCCEEcC-----------CCCHHHHHHHH----HcCCCEEEECc
Confidence 56788889999999843 222 2345556664 7887752 13678887665 37899999844
Q ss_pred CChhhHHHHHHHHHhhCCCCceEEecCCCc
Q psy15811 236 VRPSHVSTLVRCIKQSHPTVQTIVYPNKGV 265 (581)
Q Consensus 236 ~~p~~~~~~l~~l~~~~~~~p~~~~pnag~ 265 (581)
+.+..=.+.||.++...+++|++ |--|+
T Consensus 156 a~~~gG~~~lkal~~p~p~ip~~--ptGGI 183 (232)
T 4e38_A 156 AEASGGISMVKSLVGPYGDIRLM--PTGGI 183 (232)
T ss_dssp TTTTTHHHHHHHHHTTCTTCEEE--EBSSC
T ss_pred CccccCHHHHHHHHHHhcCCCee--eEcCC
Confidence 32221136778887632455554 44443
No 417
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=32.04 E-value=1.2e+02 Score=31.05 Aligned_cols=113 Identities=11% Similarity=0.068 Sum_probs=64.1
Q ss_pred CCCCCHHHHH----HHHHHHHHHHH-HCCCcEEEEEc----------------c-C------CH----HHHHHHHHHHHh
Q psy15811 142 VDSMTEADLI----AWHRPNVEALV-RAGVDYLALET----------------I-P------AE----KEALALVKLLRE 189 (581)
Q Consensus 142 ~~~~~~~~~~----~~~~~q~~~l~-~~gvD~l~~ET----------------~-~------~~----~E~~aa~~a~~~ 189 (581)
.+++|.+|+. +.|.+-++... ++|.|.|=+=- - . ++ .-+..+++++|+
T Consensus 160 pr~lt~~eI~~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~ 239 (379)
T 3aty_A 160 PEELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCD 239 (379)
T ss_dssp CEECCHHHHHHTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHH
T ss_pred CccCCHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHH
Confidence 3567776655 67777788888 89999984421 0 1 22 123455666664
Q ss_pred c-CCCcEEEEEEEcCC-CcCCCCCCHHHHHHHHHhhCCCCceEEEeCCCC------hhhHHHHHHHHHhhCCCCceEE
Q psy15811 190 F-PGQKAWLSFSCKDD-THTSHGELISSAVTSCLLANPDQIQAIGVNCVR------PSHVSTLVRCIKQSHPTVQTIV 259 (581)
Q Consensus 190 ~-~~~pv~isft~~~~-g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~~------p~~~~~~l~~l~~~~~~~p~~~ 259 (581)
. ..-||.+-++..+. .....|.++++++..+......+++.|-+-+.. |. + ++.+++. .++||+.
T Consensus 240 avg~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~---~-~~~ir~~-~~iPvi~ 312 (379)
T 3aty_A 240 AVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGD---V-VAWVRGS-YSGVKIS 312 (379)
T ss_dssp HHCGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCC---H-HHHHHTT-CCSCEEE
T ss_pred hcCCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccH---H-HHHHHHH-CCCcEEE
Confidence 3 22377766654321 012346667666554444446788888776632 22 4 6666664 5555543
No 418
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=31.98 E-value=58 Score=31.61 Aligned_cols=49 Identities=8% Similarity=0.090 Sum_probs=37.8
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEE
Q psy15811 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAW 196 (581)
Q Consensus 145 ~~~~~~~~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~ 196 (581)
.+.+++.+...+.++.|.+.|+|++++=..+.- ..+++.+++..++||+
T Consensus 45 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTas---~~~l~~lr~~~~iPvi 93 (267)
T 2gzm_A 45 RSREEVRQFTWEMTEHLLDLNIKMLVIACNTAT---AVVLEEMQKQLPIPVV 93 (267)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHH---HHHHHHHHHHCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhh---HHHHHHHHHhCCCCEE
Confidence 578999999999999999999999998654322 1256777765588977
No 419
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=31.70 E-value=76 Score=31.69 Aligned_cols=155 Identities=10% Similarity=0.154 Sum_probs=83.9
Q ss_pred HHHHHHHHHHhCCCCEEEecccCC---HHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCce
Q psy15811 409 WHRPNVEALVRAGVDYLALETIPA---EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ 485 (581)
Q Consensus 409 ~~~~~~~~l~~~gvD~i~~ET~p~---~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~ 485 (581)
...+.++.|.+.++|+|.+-..+. ......++..+++ .++++++++||++.++ ..+.+.+..+.+..-.++.
T Consensus 30 ~l~~~~~~L~~~~pd~vsVT~~~~g~~r~~t~~~a~~i~~-~g~~~i~Hltc~~~~~----~~l~~~L~~~~~~GI~niL 104 (310)
T 3apt_A 30 ALFRTLEELKAFRPAFVSITYGAMGSTRERSVAWAQRIQS-LGLNPLAHLTVAGQSR----KEVAEVLHRFVESGVENLL 104 (310)
T ss_dssp HHHHHHHHHGGGCCSEEEECCCSTTCSHHHHHHHHHHHHH-TTCCBCEEEECTTSCH----HHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHhcCCCCEEEEecCCCCCcchhHHHHHHHHHH-hCCCeEEEeecCCCCH----HHHHHHHHHHHHCCCCEEE
Confidence 334577888877899998876554 4556677777775 6999999999987443 2344444444222111111
Q ss_pred EE--------E--ECC-CCCccchHHHHHHHhh-CC--CCeEEEeeC----CCCCc-cccc--------ccc---cCCcC
Q psy15811 486 AI--------G--VNC-VRPSHVSTLVRCIKQS-HP--TVQTIVYPN----KGGVW-DSVH--------MKW---LDTED 535 (581)
Q Consensus 486 ~i--------G--iNC-~~p~~~~~~l~~l~~~-~~--~~pl~~ypN----ag~~~-~~~~--------~~~---~~~~~ 535 (581)
++ | ... .+..+..++++.++.. ++ .+-+.+||. +.... +... ..+ +.-.|
T Consensus 105 aLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~igvA~yPE~Hp~~~~~~~d~~~Lk~Kv~aGAdf~iTQ~ffD 184 (310)
T 3apt_A 105 ALRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVSVGGAAYPEGHPESESLEADLRHFKAKVEAGLDFAITQLFFN 184 (310)
T ss_dssp EECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHGGGSEEEEEECTTCCTTSSCHHHHHHHHHHHHHHHCSEEEECCCSC
T ss_pred EEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEEEeCCCcCCCCCCHHHHHHHHHHHHHcCCCEEEecccCC
Confidence 11 1 011 1123566777766665 31 345778873 22110 0000 001 11235
Q ss_pred HHHHHHHHHHHHHcC--CcEEeecCC-CchHHHHHH
Q psy15811 536 EYSILHYVPQWLEEG--VNIIGGCCE-VTSYEIQQM 568 (581)
Q Consensus 536 ~~~~~~~~~~w~~~G--~~iiGGCCG-t~P~hI~al 568 (581)
.+.|.+++.+..+.| +.||-|=-. ++...++.|
T Consensus 185 ~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~ 220 (310)
T 3apt_A 185 NAHYFGFLERARRAGIGIPILPGIMPVTSYRQLRRF 220 (310)
T ss_dssp HHHHHHHHHHHHHTTCCSCEECEECCCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCeEEEEecccCCHHHHHHH
Confidence 777888877777777 566665432 334444444
No 420
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=31.69 E-value=2e+02 Score=28.67 Aligned_cols=113 Identities=12% Similarity=0.039 Sum_probs=62.2
Q ss_pred HHHHHHHhCCCCEEEec---ccCC-----HHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhC-CC
Q psy15811 412 PNVEALVRAGVDYLALE---TIPA-----EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN-PD 482 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~E---T~p~-----~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~-~~ 482 (581)
++++.+.+.|+|+|-+- |-|. ..|...+++.+++..++|+.|- -+ .+ -++=.+++++..+.. +.
T Consensus 78 ~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~vplsI~-DT--~~----~~~~~~V~eaal~aga~~ 150 (310)
T 2h9a_B 78 AWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDVPLMII-GC--GV----EEKDAEIFPVIGEALSGR 150 (310)
T ss_dssp HHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSSCEEEE-CC--SC----HHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCCceEEEE-CC--CC----CCCCHHHHHHHHHhCCCC
Confidence 45555567899998654 4443 4566668888886567775421 11 00 002223333332221 11
Q ss_pred CceEEEECCCCCccchHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHHHcCC
Q psy15811 483 QIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGV 551 (581)
Q Consensus 483 ~~~~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~~G~ 551 (581)
.+. ||-+.......+++..+.. +.|+++.++. +.+.+.+.+....+.|+
T Consensus 151 k~i---INdvs~~~~~~~~~~aa~~--g~~vv~m~~~---------------dv~~l~~~~~~a~~~Gi 199 (310)
T 2h9a_B 151 NCL---LSSATKDNYKPIVATCMVH--GHSVVASAPL---------------DINLSKQLNIMIMEMNL 199 (310)
T ss_dssp CCE---EEEECTTTHHHHHHHHHHH--TCEEEEECSS---------------CHHHHHHHHHHHHTTTC
T ss_pred CCE---EEECCCCccHHHHHHHHHh--CCCEEEEChh---------------HHHHHHHHHHHHHHCCC
Confidence 234 5664334455666656665 4799988752 12356666777778888
No 421
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=31.40 E-value=1.6e+02 Score=29.92 Aligned_cols=109 Identities=17% Similarity=0.107 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEeccc----------CC------------HHHHH---HHHHHHHhcCC-CeEEEEEE
Q psy15811 403 EADLIAWHRPNVEALVRAGVDYLALETI----------PA------------EKEAL---ALVKLLREFPG-QKAWLSFS 456 (581)
Q Consensus 403 ~~~~~~~~~~~~~~l~~~gvD~i~~ET~----------p~------------~~Ea~---a~~~~~~~~~~-~pv~iSft 456 (581)
.+++.+.|.+.++...++|.|.|=+=-- |. ...++ .+++++|+..+ -||.+-++
T Consensus 148 I~~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls 227 (362)
T 4ab4_A 148 INDIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLA 227 (362)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEee
Confidence 3566778888888889999999854321 21 12333 45555554322 28888776
Q ss_pred EcCC-CcCCCCCcHHHHHHHHHhhCCCCceEEEECCC--CCccchHHHHHHHhhCCCCeEEEe
Q psy15811 457 CKDD-THTSHGELISSAVTSCLLANPDQIQAIGVNCV--RPSHVSTLVRCIKQSHPTVQTIVY 516 (581)
Q Consensus 457 ~~~~-~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~--~p~~~~~~l~~l~~~~~~~pl~~y 516 (581)
..+. +-..++.+.++++..+..+...+++.|-+-.. ++ +.++.+++.. ++|+++-
T Consensus 228 ~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~----~~~~~ik~~~-~iPvi~~ 285 (362)
T 4ab4_A 228 PRADAHDMGDADRAETFTYVARELGKRGIAFICSREREADD----SIGPLIKEAF-GGPYIVN 285 (362)
T ss_dssp TTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCCCTT----CCHHHHHHHH-CSCEEEE
T ss_pred ccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCCCCH----HHHHHHHHHC-CCCEEEe
Confidence 5332 11223444555544443334457776666552 22 3455565554 4786653
No 422
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=31.32 E-value=3.9e+02 Score=26.30 Aligned_cols=114 Identities=18% Similarity=0.102 Sum_probs=63.6
Q ss_pred HHHHHhCCCCEEEeccc-CC------HHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCC-CCCcHHHHHHHHHhhCCCCce
Q psy15811 414 VEALVRAGVDYLALETI-PA------EKEALALVKLLREFPGQKAWLSFSCKDDTHTS-HGELISSAVTSCLLANPDQIQ 485 (581)
Q Consensus 414 ~~~l~~~gvD~i~~ET~-p~------~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~-~G~~~~~~~~~l~~~~~~~~~ 485 (581)
++..++.|+|.+.+=-. -+ +.|+..+++..++ .++|+++- +.+ +.++. +.+.+..+++.. ...+++
T Consensus 131 ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~-~GlpvIie-~~~-G~~~~~d~e~i~~aariA---~elGAD 204 (295)
T 3glc_A 131 MDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMK-VGMPTMAV-TGV-GKDMVRDQRYFSLATRIA---AEMGAQ 204 (295)
T ss_dssp HHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHT-TTCCEEEE-ECC-----CCSHHHHHHHHHHH---HHTTCS
T ss_pred HHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHH-cCCEEEEE-CCC-CCccCCCHHHHHHHHHHH---HHhCCC
Confidence 44455689888765322 12 5566677777776 48998874 332 22221 111123333433 345778
Q ss_pred EEEECCCCCccchHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHHHcCCc
Q psy15811 486 AIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552 (581)
Q Consensus 486 ~iGiNC~~p~~~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~~G~~ 552 (581)
.|.++-+ ++ .++++.... ++|+++ +|... .+.+++.+.+++-++.|+.
T Consensus 205 ~VKt~~t-~e----~~~~vv~~~-~vPVv~---~GG~~----------~~~~~~l~~v~~ai~aGA~ 252 (295)
T 3glc_A 205 IIKTYYV-EK----GFERIVAGC-PVPIVI---AGGKK----------LPEREALEMCWQAIDQGAS 252 (295)
T ss_dssp EEEEECC-TT----THHHHHHTC-SSCEEE---ECCSC----------CCHHHHHHHHHHHHHTTCS
T ss_pred EEEeCCC-HH----HHHHHHHhC-CCcEEE---EECCC----------CCHHHHHHHHHHHHHhCCe
Confidence 8888854 23 345555544 588764 33221 1245788888888888876
No 423
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A
Probab=31.24 E-value=86 Score=31.81 Aligned_cols=51 Identities=12% Similarity=0.133 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHCC--CcEEEEEc-----cCCHHHHHHHHHHHH--hcCCCcEEEE-EEEc
Q psy15811 151 IAWHRPNVEALVRAG--VDYLALET-----IPAEKEALALVKLLR--EFPGQKAWLS-FSCK 202 (581)
Q Consensus 151 ~~~~~~q~~~l~~~g--vD~l~~ET-----~~~~~E~~aa~~a~~--~~~~~pv~is-ft~~ 202 (581)
.+.+.++++.|.+.| +|.|-+.. .++..+++.+++.+. .. ++||+|| +-+.
T Consensus 191 ~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~p~~~~~~~~l~~~a~~~~-Gl~i~ITElDv~ 251 (348)
T 1w32_A 191 TTALVNLVQRLLNNGVPIDGVGFQMHVMNDYPSIANIRQAMQKIVALSP-TLKIKITELDVR 251 (348)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHHHHHTTCS-SCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCcccEEEeccccCCCCCCHHHHHHHHHHHhcccC-CCeEEEEeCccc
Confidence 355778888898988 59997754 378899999999888 64 8999998 5554
No 424
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=31.23 E-value=51 Score=35.06 Aligned_cols=62 Identities=18% Similarity=0.202 Sum_probs=34.4
Q ss_pred HHHHHCCCcEEEEEc---------------cCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhh
Q psy15811 159 EALVRAGVDYLALET---------------IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLA 223 (581)
Q Consensus 159 ~~l~~~gvD~l~~ET---------------~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~ 223 (581)
+.+.+.|+|+|.+-. .|...-+..+.+++++ .++||++ +|-..+|..+. +.+.
T Consensus 293 ~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~-~~ipvia------~GGI~~~~di~---kala-- 360 (494)
T 1vrd_A 293 EALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARK-YDVPIIA------DGGIRYSGDIV---KALA-- 360 (494)
T ss_dssp HHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHT-TTCCEEE------ESCCCSHHHHH---HHHH--
T ss_pred HHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhh-cCCCEEE------ECCcCCHHHHH---HHHH--
Confidence 566789999998711 2333333333444443 3789887 24444444444 3332
Q ss_pred CCCCceEEEeC
Q psy15811 224 NPDQIQAIGVN 234 (581)
Q Consensus 224 ~~~~~~~vGvN 234 (581)
.|+++|++-
T Consensus 361 --~GAd~V~iG 369 (494)
T 1vrd_A 361 --AGAESVMVG 369 (494)
T ss_dssp --TTCSEEEES
T ss_pred --cCCCEEEEC
Confidence 467777753
No 425
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=31.18 E-value=3e+02 Score=24.99 Aligned_cols=50 Identities=10% Similarity=0.171 Sum_probs=32.3
Q ss_pred HHHHHHHHhCCCCEE--E-ec-c-cCCHHHHHHHHHHHHhcCCCeEEEEEEEcCC
Q psy15811 411 RPNVEALVRAGVDYL--A-LE-T-IPAEKEALALVKLLREFPGQKAWLSFSCKDD 460 (581)
Q Consensus 411 ~~~~~~l~~~gvD~i--~-~E-T-~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~ 460 (581)
.+.++.+.+.|+|.+ - ++ + .+.+......++.+++..+.|+.+.+-+++.
T Consensus 19 ~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~~~~~~v~l~v~d~ 73 (220)
T 2fli_A 19 ASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDP 73 (220)
T ss_dssp HHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSSG
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhCCCCEEEEEeecCH
Confidence 467888888999984 2 23 3 2332333455666776568899999887653
No 426
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=31.07 E-value=2.8e+02 Score=26.72 Aligned_cols=79 Identities=10% Similarity=0.142 Sum_probs=51.2
Q ss_pred HHHHHHHCCCcEEEEEc---cCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEe
Q psy15811 157 NVEALVRAGVDYLALET---IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGV 233 (581)
Q Consensus 157 q~~~l~~~gvD~l~~ET---~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGv 233 (581)
.++.+...|+|++++.. ..+.+++...+.+++.. +.|++|- +. +.+.. .+.++.+ .+++.|.+
T Consensus 31 ~~e~a~~~GaD~v~lDlE~~~~~~~~~~~~~~a~~~~-~~~~~VR--------v~-~~~~~-~i~~~l~---~g~~~I~~ 96 (267)
T 2vws_A 31 MAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPY-ASQPVIR--------PV-EGSKP-LIKQVLD---IGAQTLLI 96 (267)
T ss_dssp HHHHHHTTCCSEEEEETTTSCCCHHHHHHHHHHHTTS-SSEEEEE--------CS-SCCHH-HHHHHHH---TTCCEEEE
T ss_pred HHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-CCcEEEE--------eC-CCCHH-HHHHHHH---hCCCEEEe
Confidence 34666778999999863 45666666666666543 6777763 22 22333 3445543 67888888
Q ss_pred CCC-ChhhHHHHHHHHH
Q psy15811 234 NCV-RPSHVSTLVRCIK 249 (581)
Q Consensus 234 NC~-~p~~~~~~l~~l~ 249 (581)
--. +++++..+++.++
T Consensus 97 P~V~s~ee~~~~~~~~~ 113 (267)
T 2vws_A 97 PMVDTAEQARQVVSATR 113 (267)
T ss_dssp CCCCSHHHHHHHHHHTS
T ss_pred CCCCCHHHHHHHHHHHc
Confidence 887 7888777766553
No 427
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=30.85 E-value=1.7e+02 Score=26.53 Aligned_cols=72 Identities=10% Similarity=0.056 Sum_probs=41.8
Q ss_pred HHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC
Q psy15811 157 NVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV 236 (581)
Q Consensus 157 q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~ 236 (581)
+++...+.|+|++ +-.... ..+++.+++. ++|++.-+ .+..++...+ ..|++.|.++-.
T Consensus 75 ~~~~a~~~Gad~i-v~~~~~----~~~~~~~~~~-g~~vi~g~-----------~t~~e~~~a~----~~Gad~vk~~~~ 133 (205)
T 1wa3_A 75 QCRKAVESGAEFI-VSPHLD----EEISQFCKEK-GVFYMPGV-----------MTPTELVKAM----KLGHTILKLFPG 133 (205)
T ss_dssp HHHHHHHHTCSEE-ECSSCC----HHHHHHHHHH-TCEEECEE-----------CSHHHHHHHH----HTTCCEEEETTH
T ss_pred HHHHHHHcCCCEE-EcCCCC----HHHHHHHHHc-CCcEECCc-----------CCHHHHHHHH----HcCCCEEEEcCc
Confidence 3555667899999 443333 2355666664 89988511 2345544433 378999988743
Q ss_pred ChhhHHHHHHHHHh
Q psy15811 237 RPSHVSTLVRCIKQ 250 (581)
Q Consensus 237 ~p~~~~~~l~~l~~ 250 (581)
.+. -.+.++.+..
T Consensus 134 ~~~-g~~~~~~l~~ 146 (205)
T 1wa3_A 134 EVV-GPQFVKAMKG 146 (205)
T ss_dssp HHH-HHHHHHHHHT
T ss_pred ccc-CHHHHHHHHH
Confidence 221 1345566655
No 428
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=30.81 E-value=1.8e+02 Score=29.34 Aligned_cols=20 Identities=10% Similarity=0.142 Sum_probs=14.7
Q ss_pred HHHHHHHHCCCcEEEEEccC
Q psy15811 156 PNVEALVRAGVDYLALETIP 175 (581)
Q Consensus 156 ~q~~~l~~~gvD~l~~ET~~ 175 (581)
+.++.|.+.|.-++.+-|++
T Consensus 62 e~~~~l~~~G~G~v~~~tvt 81 (354)
T 3tjx_A 62 EELVAMTESASGSLVSKSCT 81 (354)
T ss_dssp HHHHHHHHSSCSCEEEEEEC
T ss_pred HHHHHHHHcCCCEEEeCCcC
Confidence 35677888888888777764
No 429
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=30.47 E-value=1.8e+02 Score=28.19 Aligned_cols=49 Identities=10% Similarity=0.116 Sum_probs=37.7
Q ss_pred CCHHHHHHHHHHHHHHHHH-CCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEE
Q psy15811 145 MTEADLIAWHRPNVEALVR-AGVDYLALETIPAEKEALALVKLLREFPGQKAW 196 (581)
Q Consensus 145 ~~~~~~~~~~~~q~~~l~~-~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~ 196 (581)
.+.+++.+.-.+.++.|.+ .|+|++++=..+.- ..+++.+++..++||+
T Consensus 45 ~s~~~i~~~~~~~~~~L~~~~g~d~iViACNTas---~~~l~~lr~~~~iPVi 94 (272)
T 1zuw_A 45 RPEEEVLQYTWELTNYLLENHHIKMLVIACNTAT---AIALDDIQRSVGIPVV 94 (272)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHHH---HHHHHHHHHHCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHHhhcCCCEEEEeCchhh---HHHHHHHHHHCCCCEE
Confidence 5789999999999999999 99999998654322 1257777765578877
No 430
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=30.36 E-value=94 Score=30.72 Aligned_cols=62 Identities=18% Similarity=0.247 Sum_probs=41.0
Q ss_pred HHHHHCCCcEEEEEccCCHHHHHHHHHHHHh-cCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCC
Q psy15811 159 EALVRAGVDYLALETIPAEKEALALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 235 (581)
Q Consensus 159 ~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~-~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC 235 (581)
+..+++|+|+|++-+| +.++++.+++.++. .+..|+.+|-=+.. +++. .+ ...|+|+|++-.
T Consensus 207 ~eA~~aGaD~I~LDn~-~~e~l~~av~~l~~~~~~v~ieASGGIt~-------eni~----~~---a~tGVD~IsvGs 269 (285)
T 1o4u_A 207 LRAVEAGADIVMLDNL-SPEEVKDISRRIKDINPNVIVEVSGGITE-------ENVS----LY---DFETVDVISSSR 269 (285)
T ss_dssp HHHHHTTCSEEEEESC-CHHHHHHHHHHHHHHCTTSEEEEEECCCT-------TTGG----GG---CCTTCCEEEEGG
T ss_pred HHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCceEEEECCCCH-------HHHH----HH---HHcCCCEEEEeH
Confidence 3345689999999996 67888888888875 34567776542321 2222 22 257889888766
No 431
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=30.34 E-value=1.6e+02 Score=28.70 Aligned_cols=26 Identities=19% Similarity=0.230 Sum_probs=21.0
Q ss_pred ChHHHHHHHHHHHHhccccccccc-cc
Q psy15811 40 EPEACVETHRDFIRAGADIIQSSC-YQ 65 (581)
Q Consensus 40 ~Pe~v~~iH~~yl~AGAdiI~TnT-f~ 65 (581)
.+|.+...-+--.+||||.|.|.| |.
T Consensus 171 t~eei~~A~~ia~eaGADfVKTSTGf~ 197 (260)
T 3r12_A 171 DTEEKIAACVISKLAGAHFVKTSTGFG 197 (260)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECCCSSS
T ss_pred CHHHHHHHHHHHHHhCcCEEEcCCCCC
Confidence 346667777778899999999998 64
No 432
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=30.19 E-value=1.1e+02 Score=29.28 Aligned_cols=68 Identities=18% Similarity=0.226 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEEEccC-----CHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHH
Q psy15811 147 EADLIAWHRPNVEALVRAGVDYLALETIP-----AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSC 220 (581)
Q Consensus 147 ~~~~~~~~~~q~~~l~~~gvD~l~~ET~~-----~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~ 220 (581)
.+.+.+.+++.++...+.||. |.+|+.+ +.+++..+++.+. -| .+.++++...-...|.++.+.+..+
T Consensus 142 ~~~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~l~~~v~----~~-~vg~~~D~~h~~~~g~d~~~~l~~~ 214 (295)
T 3cqj_A 142 RRRFRDGLKESVEMASRAQVT-LAMEIMDYPLMNSISKALGYAHYLN----NP-WFQLYPDIGNLSAWDNDVQMELQAG 214 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHTCE-EEEECCSSGGGCSHHHHHHHHHHHC----CT-TEEEECBHHHHHSSSCCHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhCCE-EEEeeCCCcccCCHHHHHHHHHhcC----CC-CeEEEeccchHhhcCCCHHHHHHHh
Confidence 345556666666666667997 6679865 4566666655552 23 2445565332234566776666554
No 433
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=30.18 E-value=1.3e+02 Score=28.48 Aligned_cols=79 Identities=13% Similarity=0.122 Sum_probs=49.0
Q ss_pred HHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCC
Q psy15811 156 PNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 235 (581)
Q Consensus 156 ~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC 235 (581)
++++..++.|+|++..-. .+ ..+++.+++. +.|+++ | . .+++++..+. ..|+++|++
T Consensus 80 d~~~~A~~aGAd~v~~p~-~d----~~v~~~ar~~-g~~~i~-------G-v---~t~~e~~~A~----~~Gad~vk~-- 136 (224)
T 1vhc_A 80 EQVVLAKSSGADFVVTPG-LN----PKIVKLCQDL-NFPITP-------G-V---NNPMAIEIAL----EMGISAVKF-- 136 (224)
T ss_dssp HHHHHHHHHTCSEEECSS-CC----HHHHHHHHHT-TCCEEC-------E-E---CSHHHHHHHH----HTTCCEEEE--
T ss_pred HHHHHHHHCCCCEEEECC-CC----HHHHHHHHHh-CCCEEe-------c-c---CCHHHHHHHH----HCCCCEEEE--
Confidence 467888889999997542 22 2344566663 777765 2 1 2466765543 378999999
Q ss_pred CChh-hH--HHHHHHHHhhCCCCceE
Q psy15811 236 VRPS-HV--STLVRCIKQSHPTVQTI 258 (581)
Q Consensus 236 ~~p~-~~--~~~l~~l~~~~~~~p~~ 258 (581)
.|. .+ .+.|+.++...+++|++
T Consensus 137 -Fpa~~~gG~~~lk~l~~~~~~ipvv 161 (224)
T 1vhc_A 137 -FPAEASGGVKMIKALLGPYAQLQIM 161 (224)
T ss_dssp -TTTTTTTHHHHHHHHHTTTTTCEEE
T ss_pred -eeCccccCHHHHHHHHhhCCCCeEE
Confidence 442 12 56778887642356653
No 434
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=30.06 E-value=4.2e+02 Score=26.30 Aligned_cols=41 Identities=12% Similarity=0.000 Sum_probs=29.5
Q ss_pred HHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEE
Q psy15811 158 VEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFS 200 (581)
Q Consensus 158 ~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft 200 (581)
++.-.+.|--+-.|- +.+++-++++++++++. +.|||++++
T Consensus 9 l~~A~~~~yAV~AfN-v~n~e~~~avi~AAee~-~sPvIlq~s 49 (307)
T 3n9r_A 9 LLKAHKEGYGVGAFN-FVNFEMLNAIFEAGNEE-NSPLFIQAS 49 (307)
T ss_dssp HHHHHHHTCCEEEEE-CSSHHHHHHHHHHHHHH-TCCEEEEEE
T ss_pred HHHHHHcCceEEEEe-eCCHHHHHHHHHHHHHh-CCCEEEEcC
Confidence 333344555444444 46889999999999986 899999986
No 435
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=30.01 E-value=2.1e+02 Score=29.12 Aligned_cols=88 Identities=10% Similarity=0.026 Sum_probs=50.4
Q ss_pred CCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECCCCCc-----------cchHHHHHHHhh------CC
Q psy15811 447 PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS-----------HVSTLVRCIKQS------HP 509 (581)
Q Consensus 447 ~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~~p~-----------~~~~~l~~l~~~------~~ 509 (581)
.+.|+.+++.-.. . ..+++++.++.+... ...+++|-|||+.|. .+.++++.++.. ..
T Consensus 145 ~~~pv~vniggn~--~--t~~~~~dy~~~~~~~-~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~ 219 (367)
T 3zwt_A 145 DGLPLGVNLGKNK--T--SVDAAEDYAEGVRVL-GPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVH 219 (367)
T ss_dssp TTCCEEEEECCCT--T--CSCHHHHHHHHHHHH-GGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGG
T ss_pred CCceEEEEEecCC--C--CCcCHHHHHHHHHHH-hhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccC
Confidence 3789999993211 1 134566665544322 234688899996554 234555555432 02
Q ss_pred CCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHHHcCCc
Q psy15811 510 TVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVN 552 (581)
Q Consensus 510 ~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~~G~~ 552 (581)
++|+.+.-..+ .+.+++.+.++...+.|+.
T Consensus 220 ~~Pv~vKi~p~-------------~~~~~~~~ia~~~~~aGad 249 (367)
T 3zwt_A 220 RPAVLVKIAPD-------------LTSQDKEDIASVVKELGID 249 (367)
T ss_dssp CCEEEEEECSC-------------CCHHHHHHHHHHHHHHTCC
T ss_pred CceEEEEeCCC-------------CCHHHHHHHHHHHHHcCCC
Confidence 58988875421 1234566666766777764
No 436
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=29.91 E-value=2e+02 Score=30.28 Aligned_cols=120 Identities=17% Similarity=0.286 Sum_probs=61.7
Q ss_pred CeEEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEE--E-ccC------CHHHHHHH---H
Q psy15811 117 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL--E-TIP------AEKEALAL---V 184 (581)
Q Consensus 117 ~~~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~--E-T~~------~~~E~~aa---~ 184 (581)
+..|.|=|==+.+++++|+ .+.+++ .++++.+++.|+|+|=+ | |-| .-+|+.-+ +
T Consensus 190 ~~~vMGIlNvTPDSFsDgg---------~~~~~a----l~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI 256 (442)
T 3mcm_A 190 NTIRMGIVNLSNQSFSDGN---------FDDNQR----KLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFL 256 (442)
T ss_dssp SSEEEEEEECSSCC-CCCS---------SCCCHH----HHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCCCCCCCC---------CCHHHH----HHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 6789998888888887653 333443 56677788899999743 3 323 34566554 5
Q ss_pred HHHHh-cCCC--cEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC-ChhhHHHHHHHHHhhCCCCceEEe
Q psy15811 185 KLLRE-FPGQ--KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV-RPSHVSTLVRCIKQSHPTVQTIVY 260 (581)
Q Consensus 185 ~a~~~-~~~~--pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~-~p~~~~~~l~~l~~~~~~~p~~~~ 260 (581)
+++++ .+.. .+.+|+ ++ ..-+.++++++.. .|++ +.||=. + ......++.+.+ .+.|++++
T Consensus 257 ~~l~~~~~~~~~~vpISI--DT----~~~~VaeaAL~~~-----aGa~-i~INDVsg-~~d~~m~~v~a~--~g~~vVlM 321 (442)
T 3mcm_A 257 EYFKSQLANLIYKPLVSI--DT----RKLEVMQKILAKH-----HDII-WMINDVEC-NNIEQKAQLIAK--YNKKYVII 321 (442)
T ss_dssp HHHHHHTTTCSSCCEEEE--EC----CCHHHHHHHHHHH-----GGGC-CEEEECCC-TTHHHHHHHHHH--HTCEEEEE
T ss_pred HHHHhhccccCCCCeEEE--eC----CCHHHHHHHHhhC-----CCCC-EEEEcCCC-CCChHHHHHHHH--hCCeEEEE
Confidence 55554 1111 234433 31 1222233332211 3443 224443 2 223344444444 36789998
Q ss_pred cCCC
Q psy15811 261 PNKG 264 (581)
Q Consensus 261 pnag 264 (581)
.+.|
T Consensus 322 h~~G 325 (442)
T 3mcm_A 322 HNLG 325 (442)
T ss_dssp CC--
T ss_pred CCCC
Confidence 8877
No 437
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium}
Probab=29.56 E-value=1.1e+02 Score=31.19 Aligned_cols=51 Identities=16% Similarity=0.198 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHhCC--CCEEEecc-----cCCHHHHHHHHHHHHhcCCCeEEEE-EEEc
Q psy15811 407 IAWHRPNVEALVRAG--VDYLALET-----IPAEKEALALVKLLREFPGQKAWLS-FSCK 458 (581)
Q Consensus 407 ~~~~~~~~~~l~~~g--vD~i~~ET-----~p~~~Ea~a~~~~~~~~~~~pv~iS-ft~~ 458 (581)
.+.+...++.|.+.| +|.|-+.. .|+..+.+..++.+.. .++||+|| +-+.
T Consensus 200 ~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~p~~~~~~~~l~~~a~-~Glpi~iTEldv~ 258 (356)
T 2dep_A 200 RDILYELVKNLLEKGVPIDGVGHQTHIDIYNPPVERIIESIKKFAG-LGLDNIITELDMS 258 (356)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHT-TTCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCCccEEEeeeeecCCCCCHHHHHHHHHHHHh-CCCeEEEeeceec
Confidence 355778888888776 59988763 4788999999988886 59999998 4454
No 438
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=29.27 E-value=2.4e+02 Score=26.30 Aligned_cols=79 Identities=11% Similarity=0.073 Sum_probs=49.1
Q ss_pred HHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCC
Q psy15811 156 PNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 235 (581)
Q Consensus 156 ~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC 235 (581)
++++..++.|+|++..-- .+ ..++++.++. +.|++.. + .+++++..+. ..|+++|++
T Consensus 79 d~~~~A~~aGAd~v~~p~-~d----~~v~~~~~~~-g~~~i~G--~---------~t~~e~~~A~----~~Gad~v~~-- 135 (214)
T 1wbh_A 79 QQLAEVTEAGAQFAISPG-LT----EPLLKAATEG-TIPLIPG--I---------STVSELMLGM----DYGLKEFKF-- 135 (214)
T ss_dssp HHHHHHHHHTCSCEEESS-CC----HHHHHHHHHS-SSCEEEE--E---------SSHHHHHHHH----HTTCCEEEE--
T ss_pred HHHHHHHHcCCCEEEcCC-CC----HHHHHHHHHh-CCCEEEe--c---------CCHHHHHHHH----HCCCCEEEE--
Confidence 467778889999997542 22 2445566654 7777763 1 2366765543 378999999
Q ss_pred CChh-hH--HHHHHHHHhhCCCCceE
Q psy15811 236 VRPS-HV--STLVRCIKQSHPTVQTI 258 (581)
Q Consensus 236 ~~p~-~~--~~~l~~l~~~~~~~p~~ 258 (581)
.|. .+ .+.|+.++...+++|++
T Consensus 136 -Fpa~~~gG~~~lk~i~~~~~~ipvv 160 (214)
T 1wbh_A 136 -FPAEANGGVKALQAIAGPFSQVRFC 160 (214)
T ss_dssp -TTTTTTTHHHHHHHHHTTCTTCEEE
T ss_pred -ecCccccCHHHHHHHhhhCCCCeEE
Confidence 442 11 46778877642356653
No 439
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=29.09 E-value=1.3e+02 Score=30.21 Aligned_cols=89 Identities=15% Similarity=0.172 Sum_probs=54.8
Q ss_pred HHHHHHHHCCCcEEEE-EccCCH--------------HHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHH
Q psy15811 156 PNVEALVRAGVDYLAL-ETIPAE--------------KEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSC 220 (581)
Q Consensus 156 ~q~~~l~~~gvD~l~~-ET~~~~--------------~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~ 220 (581)
.-++++..+|+|.|-+ =..++. +.++.+++.+++. +.. +.|.+++.++. +=+.+.+.++.+
T Consensus 85 ~a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~-g~~--v~f~~~d~~~~-~~~~~~~~~~~~ 160 (325)
T 3eeg_A 85 IAGEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKV-VHE--VEFFCEDAGRA-DQAFLARMVEAV 160 (325)
T ss_dssp HHHHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTT-SSE--EEEEEETGGGS-CHHHHHHHHHHH
T ss_pred HHHHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHC-CCE--EEEEccccccc-hHHHHHHHHHHH
Confidence 3456677779998743 233322 2345667777765 554 46788765543 222233444444
Q ss_pred HhhCCCCceEEEeCCC----ChhhHHHHHHHHHhh
Q psy15811 221 LLANPDQIQAIGVNCV----RPSHVSTLVRCIKQS 251 (581)
Q Consensus 221 ~~~~~~~~~~vGvNC~----~p~~~~~~l~~l~~~ 251 (581)
. ..|++.|.+-=+ .|..+.++++.+++.
T Consensus 161 ~---~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~ 192 (325)
T 3eeg_A 161 I---EAGADVVNIPDTTGYMLPWQYGERIKYLMDN 192 (325)
T ss_dssp H---HHTCSEEECCBSSSCCCHHHHHHHHHHHHHH
T ss_pred H---hcCCCEEEecCccCCcCHHHHHHHHHHHHHh
Confidence 3 467887776554 499999999999886
No 440
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A
Probab=29.02 E-value=1.2e+02 Score=30.37 Aligned_cols=52 Identities=13% Similarity=0.123 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHhCC--CCEEEecc-----cCCHHHHHHHHHHHHhcCCCeEEEE-EEEc
Q psy15811 406 LIAWHRPNVEALVRAG--VDYLALET-----IPAEKEALALVKLLREFPGQKAWLS-FSCK 458 (581)
Q Consensus 406 ~~~~~~~~~~~l~~~g--vD~i~~ET-----~p~~~Ea~a~~~~~~~~~~~pv~iS-ft~~ 458 (581)
-.+.+...++.|.+.| +|.|-+.. .|+..+.+.+++.+.. .++|+||| +.+.
T Consensus 186 k~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~~~~~~~~~~l~~~a~-~G~pi~iTEldi~ 245 (331)
T 1n82_A 186 KREKIFALVKSLRDKGIPIHGIGMQAHWSLTRPSLDEIRAAIERYAS-LGVVLHITELDVS 245 (331)
T ss_dssp HHHHHHHHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHHHHHT-TTCEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHHCCCccceEEeceecCCCCCCHHHHHHHHHHHHh-cCCeEEEEeceec
Confidence 3456777888888888 59998763 4788888888888887 59999998 4454
No 441
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=28.94 E-value=2.6e+02 Score=32.59 Aligned_cols=67 Identities=16% Similarity=0.223 Sum_probs=40.2
Q ss_pred HHHh-cCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECCCCCcc----------------chHHHHHH
Q psy15811 442 LLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH----------------VSTLVRCI 504 (581)
Q Consensus 442 ~~~~-~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~~p~~----------------~~~~l~~l 504 (581)
.+++ .++.|+++++.+-. +-+.+.++++.+ ...++++|-||+..|.. +..+++.+
T Consensus 627 ~~~~~~~~~~~i~~i~~g~-----~~~~~~~~a~~~---~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v 698 (1025)
T 1gte_A 627 ELKADFPDNIVIASIMCSY-----NKNDWMELSRKA---EASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWV 698 (1025)
T ss_dssp HHHHHCTTSEEEEEECCCS-----CHHHHHHHHHHH---HHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHH
T ss_pred HHHhcCCCCCeEEEecCCC-----CHHHHHHHHHHH---HhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHH
Confidence 3443 34789999884311 112344555544 33567888888755543 34467777
Q ss_pred HhhCCCCeEEEee
Q psy15811 505 KQSHPTVQTIVYP 517 (581)
Q Consensus 505 ~~~~~~~pl~~yp 517 (581)
+... ++|+++.-
T Consensus 699 ~~~~-~~Pv~vK~ 710 (1025)
T 1gte_A 699 RQAV-QIPFFAKL 710 (1025)
T ss_dssp HHHC-SSCEEEEE
T ss_pred HHhh-CCceEEEe
Confidence 7765 68988865
No 442
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=28.83 E-value=2.6e+02 Score=28.53 Aligned_cols=79 Identities=10% Similarity=0.032 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHCCCcEEEEE--ccC---CHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCC
Q psy15811 153 WHRPNVEALVRAGVDYLALE--TIP---AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQ 227 (581)
Q Consensus 153 ~~~~q~~~l~~~gvD~l~~E--T~~---~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~ 227 (581)
.+.+.++.|.+.|+|+|-+= |.. ...+....+..+|+..+.||++ +|.+ +.+++.+.+. ..+
T Consensus 257 ~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~------~G~i----~~~~a~~~l~---~g~ 323 (376)
T 1icp_A 257 LGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIV------AGGY----DREDGNRALI---EDR 323 (376)
T ss_dssp HHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCSCEEE------ESSC----CHHHHHHHHH---TTS
T ss_pred HHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcCCCEEE------eCCC----CHHHHHHHHH---CCC
Confidence 35667788888999998552 111 1000011234445434788875 2333 3555554443 456
Q ss_pred ceEEEeCC---CChhhHHHH
Q psy15811 228 IQAIGVNC---VRPSHVSTL 244 (581)
Q Consensus 228 ~~~vGvNC---~~p~~~~~~ 244 (581)
+|+|++-= ..|+...++
T Consensus 324 aD~V~~gR~~l~~P~l~~k~ 343 (376)
T 1icp_A 324 ADLVAYGRLFISNPDLPKRF 343 (376)
T ss_dssp CSEEEESHHHHHCTTHHHHH
T ss_pred CcEEeecHHHHhCccHHHHH
Confidence 88888854 257655544
No 443
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=28.76 E-value=4.6e+02 Score=26.32 Aligned_cols=129 Identities=16% Similarity=0.100 Sum_probs=69.4
Q ss_pred HHHHHhCCCCEEEecccCC-----------HHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCc-------HHHHHHH
Q psy15811 414 VEALVRAGVDYLALETIPA-----------EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGEL-------ISSAVTS 475 (581)
Q Consensus 414 ~~~l~~~gvD~i~~ET~p~-----------~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~-------~~~~~~~ 475 (581)
++.+++.|+|.+-+=-... +..+..+.+..++ .++|+++-+-..+.+. .+-.+ ..-+...
T Consensus 116 ve~a~~~GADAVk~lv~~g~d~~~e~~~~q~~~l~rv~~ec~~-~GiPlllEil~y~~~~-~~~~~~~~a~~~p~~V~~a 193 (332)
T 3iv3_A 116 IKRLKEAGADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQA-EDIPFFLEILTYDETI-SNNSSVEFAKVKVHKVNDA 193 (332)
T ss_dssp HHHHHHTTCSEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHH-HTCCEEEEEEECBTTB-SCTTSHHHHTTHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEEEcCCCchHHHHHHHHHHHHHHHHHHHH-cCCceEEEEeccCCCC-CCCcchhhhccCHHHHHHH
Confidence 4556678999964443332 2233344444445 5999998776544321 11122 1223333
Q ss_pred HHhh--CCCCceEEEECC-CCCccc------------hH---HHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHH
Q psy15811 476 CLLA--NPDQIQAIGVNC-VRPSHV------------ST---LVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEY 537 (581)
Q Consensus 476 l~~~--~~~~~~~iGiNC-~~p~~~------------~~---~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~ 537 (581)
++.. ...+++.+=++. ..++.+ .. .++++.... ++|+++-.- | + +.+
T Consensus 194 ~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~-~~P~v~lsg-G-~------------~~~ 258 (332)
T 3iv3_A 194 MKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEAST-DLPYIYLSA-G-V------------SAE 258 (332)
T ss_dssp HHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTC-SSCEEEECT-T-C------------CHH
T ss_pred HHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcC-CCCEEEECC-C-C------------CHH
Confidence 3223 234889999998 455422 22 355555555 688654332 2 1 134
Q ss_pred HHHHHHHHHHHcCCcEEeecCC
Q psy15811 538 SILHYVPQWLEEGVNIIGGCCE 559 (581)
Q Consensus 538 ~~~~~~~~w~~~G~~iiGGCCG 559 (581)
.|.+.++.-++.|+++-|=+||
T Consensus 259 ~fl~~v~~A~~aGa~f~Gv~~G 280 (332)
T 3iv3_A 259 LFQETLVFAHKAGAKFNGVLCG 280 (332)
T ss_dssp HHHHHHHHHHHHTCCCCEEEEC
T ss_pred HHHHHHHHHHHcCCCcceEEee
Confidence 5666666666677766666666
No 444
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=28.65 E-value=70 Score=31.50 Aligned_cols=50 Identities=6% Similarity=0.092 Sum_probs=38.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEE
Q psy15811 144 SMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAW 196 (581)
Q Consensus 144 ~~~~~~~~~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~ 196 (581)
..+.+++.+...+.++.|.+.|+|+|++=..+.-. .+++.+++..++||+
T Consensus 65 ~~s~~~i~~~~~~~~~~L~~~g~d~IVIACNTas~---~~l~~lr~~~~iPVi 114 (290)
T 2vvt_A 65 PRPAEQVVQFTWEMADFLLKKRIKMLVIACNTATA---VALEEIKAALPIPVV 114 (290)
T ss_dssp TSCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHH---HHHHHHHHHCSSCEE
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCcchhH---HHHHHHHHhCCCCEE
Confidence 35789999999999999999999999987654321 256677765578977
No 445
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=28.55 E-value=4.6e+02 Score=26.29 Aligned_cols=76 Identities=17% Similarity=0.114 Sum_probs=46.3
Q ss_pred HHHHHHHHHH--HHCCCcEEEEEccC---------------CHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHH
Q psy15811 152 AWHRPNVEAL--VRAGVDYLALETIP---------------AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELIS 214 (581)
Q Consensus 152 ~~~~~q~~~l--~~~gvD~l~~ET~~---------------~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~ 214 (581)
+....-++.+ .+-|+|++=+|-=. +.+|+...++.+-+.+.+||++ +.-|.+-+
T Consensus 188 ~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~~P~v~---------lsgG~~~~ 258 (332)
T 3iv3_A 188 HKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTDLPYIY---------LSAGVSAE 258 (332)
T ss_dssp HHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCSSCEEE---------ECTTCCHH
T ss_pred HHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcCCCCEEE---------ECCCCCHH
Confidence 3455566777 56699999888433 3467766565555556899774 33455555
Q ss_pred HHHHHHHhhCCCCceEEEeCCC
Q psy15811 215 SAVTSCLLANPDQIQAIGVNCV 236 (581)
Q Consensus 215 ~~~~~~~~~~~~~~~~vGvNC~ 236 (581)
++...+..+...|+..-||-|+
T Consensus 259 ~fl~~v~~A~~aGa~f~Gv~~G 280 (332)
T 3iv3_A 259 LFQETLVFAHKAGAKFNGVLCG 280 (332)
T ss_dssp HHHHHHHHHHHHTCCCCEEEEC
T ss_pred HHHHHHHHHHHcCCCcceEEee
Confidence 5555554333355544677776
No 446
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A
Probab=28.53 E-value=1.1e+02 Score=31.04 Aligned_cols=51 Identities=14% Similarity=0.207 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHhCC--CCEEEecc-----cCCHHHHHHHHHHHH--hcCCCeEEEE-EEEc
Q psy15811 407 IAWHRPNVEALVRAG--VDYLALET-----IPAEKEALALVKLLR--EFPGQKAWLS-FSCK 458 (581)
Q Consensus 407 ~~~~~~~~~~l~~~g--vD~i~~ET-----~p~~~Ea~a~~~~~~--~~~~~pv~iS-ft~~ 458 (581)
.+.+...++.|.+.| +|.|-+.. .|+..+.+.+++.+. . .++||+|| +-+.
T Consensus 191 ~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~p~~~~~~~~l~~~a~~~-~Gl~i~ITElDv~ 251 (348)
T 1w32_A 191 TTALVNLVQRLLNNGVPIDGVGFQMHVMNDYPSIANIRQAMQKIVALS-PTLKIKITELDVR 251 (348)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHHHHHTTC-SSCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCcccEEEeccccCCCCCCHHHHHHHHHHHhccc-CCCeEEEEeCccc
Confidence 345778888888888 59987754 378899999998888 6 69999999 5554
No 447
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=28.51 E-value=80 Score=30.89 Aligned_cols=90 Identities=17% Similarity=0.160 Sum_probs=57.7
Q ss_pred HHHHHHHHHHCCCcEEEEEccCC----------------------HHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCC
Q psy15811 154 HRPNVEALVRAGVDYLALETIPA----------------------EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGE 211 (581)
Q Consensus 154 ~~~q~~~l~~~gvD~l~~ET~~~----------------------~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~ 211 (581)
..+.++.|.++ ||+|-+-+=.+ ++.....++.+|+..++|+++ |+..+ .-...|
T Consensus 32 ~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~Pii~-m~y~n-~v~~~g- 107 (271)
T 1ujp_A 32 FLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEKPLFL-MTYLN-PVLAWG- 107 (271)
T ss_dssp HHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSCEEE-ECCHH-HHHHHC-
T ss_pred HHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEE-EecCc-HHHHhh-
Confidence 44467888888 99998875332 233445566666556899887 43221 001112
Q ss_pred CHHHHHHHHHhhCCCCceEEEeCCCChhhHHHHHHHHHhh
Q psy15811 212 LISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQS 251 (581)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~vGvNC~~p~~~~~~l~~l~~~ 251 (581)
.+..++.+.+ .|++++-+.+..+++..++++.++++
T Consensus 108 -~~~f~~~~~~---aG~dGviv~Dl~~ee~~~~~~~~~~~ 143 (271)
T 1ujp_A 108 -PERFFGLFKQ---AGATGVILPDLPPDEDPGLVRLAQEI 143 (271)
T ss_dssp -HHHHHHHHHH---HTCCEEECTTCCGGGCHHHHHHHHHH
T ss_pred -HHHHHHHHHH---cCCCEEEecCCCHHHHHHHHHHHHHc
Confidence 2455555553 68898888888778888888888775
No 448
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=28.49 E-value=1.7e+02 Score=30.84 Aligned_cols=66 Identities=18% Similarity=0.243 Sum_probs=41.3
Q ss_pred HHHHHHHHHCCCcEEEEEccC-CHHHHHHHHHHHHhc-CCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEE
Q psy15811 155 RPNVEALVRAGVDYLALETIP-AEKEALALVKLLREF-PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIG 232 (581)
Q Consensus 155 ~~q~~~l~~~gvD~l~~ET~~-~~~E~~aa~~a~~~~-~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vG 232 (581)
.++++.+.++|+|.|.+.+.. +.......++.+++. +++|++. |.. .+.+.+ ..+. ..|+++|-
T Consensus 235 ~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~p~~pvi~-------G~v---~t~~~a-~~~~---~~Gad~I~ 300 (491)
T 1zfj_A 235 FERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIA-------GNI---ATAEGA-RALY---DAGVDVVK 300 (491)
T ss_dssp HHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHCSSSCEEE-------EEE---CSHHHH-HHHH---HTTCSEEE
T ss_pred HHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHHCCCCcEeC-------CCc---cCHHHH-HHHH---HcCCCEEE
Confidence 378899999999999998732 334455556666644 5888872 111 223333 3333 36788876
Q ss_pred eC
Q psy15811 233 VN 234 (581)
Q Consensus 233 vN 234 (581)
+.
T Consensus 301 vg 302 (491)
T 1zfj_A 301 VG 302 (491)
T ss_dssp EC
T ss_pred EC
Confidence 65
No 449
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=28.46 E-value=2.2e+02 Score=26.89 Aligned_cols=139 Identities=14% Similarity=0.030 Sum_probs=69.6
Q ss_pred hHHHHHHHHHHHHhccccccccccccccccHhhcCCCHHHHHHHHHHHHHHHHHHhhhhcCCCcccccccccccCCCeEE
Q psy15811 41 PEACVETHRDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIET 120 (581)
Q Consensus 41 Pe~v~~iH~~yl~AGAdiI~TnTf~a~~~~l~~~g~~~~~~~~i~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~~~~~V 120 (581)
++.++++-+..-+.|-.+...++|..++. -+ ..++..+..++.+++|++.-. +.++
T Consensus 47 ~~~~~~~~~~l~~~gl~~~~~~~~~~~~~----~~-~~~~~~~~~~~~i~~A~~lG~-------------------~~v~ 102 (286)
T 3dx5_A 47 YETTERELNCLKDKTLEITMISDYLDISL----SA-DFEKTIEKCEQLAILANWFKT-------------------NKIR 102 (286)
T ss_dssp HHHHHHHHHHTGGGTCCEEEEECCCCCST----TS-CHHHHHHHHHHHHHHHHHHTC-------------------CEEE
T ss_pred HHHHHHHHHHHHHcCCeEEEEecCCCCCC----ch-hHHHHHHHHHHHHHHHHHhCC-------------------CEEE
Confidence 35566666656677777765555532221 01 134445566777777765522 2222
Q ss_pred EeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEEEccC-----CHHHHHHHHHHHHhcCCCcE
Q psy15811 121 AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIP-----AEKEALALVKLLREFPGQKA 195 (581)
Q Consensus 121 agsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~ET~~-----~~~E~~aa~~a~~~~~~~pv 195 (581)
. ..|..+.. ....-..+.+.+..++.++...+.||. |.+|+.+ +..++..+++.+. .|
T Consensus 103 ~-~~g~~~~~----------~~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~lE~~~~~~~~~~~~~~~l~~~~~----~~- 165 (286)
T 3dx5_A 103 T-FAGQKGSA----------DFSQQERQEYVNRIRMICELFAQHNMY-VLLETHPNTLTDTLPSTLELLGEVD----HP- 165 (286)
T ss_dssp E-CSCSSCGG----------GSCHHHHHHHHHHHHHHHHHHHHTTCE-EEEECCTTSTTSSHHHHHHHHHHHC----CT-
T ss_pred E-cCCCCCcc----------cCcHHHHHHHHHHHHHHHHHHHHhCCE-EEEecCCCcCcCCHHHHHHHHHhcC----CC-
Confidence 2 12221110 000112355566666666666677884 5568874 4666655555553 22
Q ss_pred EEEEEEcCCCcCCCCCCHHHHHHHH
Q psy15811 196 WLSFSCKDDTHTSHGELISSAVTSC 220 (581)
Q Consensus 196 ~isft~~~~g~l~~G~~~~~~~~~~ 220 (581)
.+.++++...-...|.++.+++..+
T Consensus 166 ~vg~~~D~~h~~~~g~d~~~~l~~~ 190 (286)
T 3dx5_A 166 NLKINLDFLHIWESGADPVDSFQQL 190 (286)
T ss_dssp TEEEEEEHHHHHHTTCCHHHHHHHH
T ss_pred CeEEEeccccHhhcCCCHHHHHHHH
Confidence 1344555333334566666666554
No 450
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A
Probab=28.13 E-value=3.7e+02 Score=27.01 Aligned_cols=47 Identities=11% Similarity=0.164 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHCC--CcEEEEEcc-----CCHHHHHHHHHHHHhcCCCcEEEE
Q psy15811 151 IAWHRPNVEALVRAG--VDYLALETI-----PAEKEALALVKLLREFPGQKAWLS 198 (581)
Q Consensus 151 ~~~~~~q~~~l~~~g--vD~l~~ET~-----~~~~E~~aa~~a~~~~~~~pv~is 198 (581)
.+.|.+.++.|.+.| +|.|-++.- +...+++.+++.+.+. ++||+||
T Consensus 202 ~~~~~~lv~~l~~~GvpIdgIG~Q~H~~~~~~~~~~~~~~l~~~a~l-Gl~v~iT 255 (341)
T 3niy_A 202 SNFVYNMIKELKEKGVPVDGIGFQMHIDYRGLNYDSFRRNLERFAKL-GLQIYIT 255 (341)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEETTCCCHHHHHHHHHHHHHT-TCEEEEE
T ss_pred HHHHHHHHHHHHHCCCCcceEeeeeecCCCCCCHHHHHHHHHHHHHc-CCeEEEE
Confidence 356778999999988 688887743 2357788888888775 9999997
No 451
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=28.02 E-value=2.5e+02 Score=27.98 Aligned_cols=84 Identities=19% Similarity=0.199 Sum_probs=46.6
Q ss_pred HHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCC--CCHHHHHHHHHhhC-CCCceEEEeC
Q psy15811 158 VEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHG--ELISSAVTSCLLAN-PDQIQAIGVN 234 (581)
Q Consensus 158 ~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G--~~~~~~~~~~~~~~-~~~~~~vGvN 234 (581)
++.|.+.|+|+|-++...++.|++..+ . + .+.++--+++ .++.| +.+.+.+..+.+.. ..+-..++..
T Consensus 256 l~~l~~~g~d~i~~d~~~dl~~~~~~~---g---~-~~~l~Gn~dp--~~l~~t~e~i~~~v~~~l~~~g~~~g~I~~~g 326 (354)
T 3cyv_A 256 LEAMAETGCDALGLDWTTDIADARRRV---G---N-KVALQGNMDP--SMLYAPPARIEEEVATILAGFGHGEGHVFNLG 326 (354)
T ss_dssp HHHHHTTSCSEEECCTTSCHHHHHHHH---T---T-TSEEECCBCG--GGGGSCHHHHHHHHHHHHTTTTTSSCEEBCBS
T ss_pred HHHHHhcCCCEEEeCCCCCHHHHHHHh---C---C-CeEEEecCCh--HHhCCCHHHHHHHHHHHHHHhCCCCCeEEecC
Confidence 456778999999999777888765432 2 1 1223333333 23333 33444455554421 1123567777
Q ss_pred CC-----ChhhHHHHHHHHHh
Q psy15811 235 CV-----RPSHVSTLVRCIKQ 250 (581)
Q Consensus 235 C~-----~p~~~~~~l~~l~~ 250 (581)
|+ .|+++..+++.+..
T Consensus 327 ~gi~~~~p~env~a~v~~v~~ 347 (354)
T 3cyv_A 327 HGIHQDVPPEHAGVFVEAVHR 347 (354)
T ss_dssp SCCCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHH
Confidence 85 25666666666554
No 452
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=28.00 E-value=4.1e+02 Score=26.24 Aligned_cols=89 Identities=12% Similarity=0.133 Sum_probs=56.0
Q ss_pred HHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECC
Q psy15811 412 PNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 491 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC 491 (581)
+.+.+..++|.-.++...+-+..+++..++.+++..+.|+-+.+.+.+ ..+.+.++.+.+ .++++|-++.
T Consensus 41 ~la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~~~~p~gVnl~~~~-------~~~~~~~~~~~~---~g~d~V~l~~ 110 (326)
T 3bo9_A 41 TLAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQKTDKPFGVNIILVS-------PWADDLVKVCIE---EKVPVVTFGA 110 (326)
T ss_dssp HHHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTTCSSCEEEEEETTS-------TTHHHHHHHHHH---TTCSEEEEES
T ss_pred HHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcCCCEEEEEeccC-------CCHHHHHHHHHH---CCCCEEEECC
Confidence 556666777776566555557788888888888767789988887632 235666666532 3556666666
Q ss_pred CCCccchHHHHHHHhhCCCCeEEE
Q psy15811 492 VRPSHVSTLVRCIKQSHPTVQTIV 515 (581)
Q Consensus 492 ~~p~~~~~~l~~l~~~~~~~pl~~ 515 (581)
..|. ..++.++.. +++++.
T Consensus 111 g~p~---~~~~~l~~~--g~~v~~ 129 (326)
T 3bo9_A 111 GNPT---KYIRELKEN--GTKVIP 129 (326)
T ss_dssp SCCH---HHHHHHHHT--TCEEEE
T ss_pred CCcH---HHHHHHHHc--CCcEEE
Confidence 4453 345555543 355554
No 453
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=27.93 E-value=2.4e+02 Score=33.44 Aligned_cols=102 Identities=10% Similarity=0.120 Sum_probs=65.8
Q ss_pred HHHHHHCCCcEE-EEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCC----CCCCHHHHHHHHHhhCCCCceEEE
Q psy15811 158 VEALVRAGVDYL-ALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTS----HGELISSAVTSCLLANPDQIQAIG 232 (581)
Q Consensus 158 ~~~l~~~gvD~l-~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~----~G~~~~~~~~~~~~~~~~~~~~vG 232 (581)
++...++|+|.| +|=..+++...+.+.+.+++. +.-+...++... +.+. .-.+++..+..+......|++.|.
T Consensus 633 v~~a~~~Gvd~irif~~~sd~~~~~~~~~~~~e~-g~~~~~~i~~~~-~~~~pe~~~~~~~~~~~~~a~~~~~~Ga~~i~ 710 (1150)
T 3hbl_A 633 VQESAKAGIDVFRIFDSLNWVDQMKVANEAVQEA-GKISEGTICYTG-DILNPERSNIYTLEYYVKLAKELEREGFHILA 710 (1150)
T ss_dssp HHHHHHTTCCEEEEECTTCCGGGGHHHHHHHHHT-TCEEEEEEECCS-CTTCTTTCSSSSHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHhCCcCEEEEEeeCCHHHHHHHHHHHHHHH-hhheeEEEeecc-cccChhhcCCCCHHHHHHHHHHHHHcCCCeee
Confidence 555667899998 777888888888888888875 433333333221 1111 113344333333222357888888
Q ss_pred eCCC----ChhhHHHHHHHHHhhCCCCceEEecC
Q psy15811 233 VNCV----RPSHVSTLVRCIKQSHPTVQTIVYPN 262 (581)
Q Consensus 233 vNC~----~p~~~~~~l~~l~~~~~~~p~~~~pn 262 (581)
+-=+ .|..+..+++.+++. .++||.+...
T Consensus 711 l~Dt~G~~~P~~~~~lv~~l~~~-~~~~i~~H~H 743 (1150)
T 3hbl_A 711 IKDMAGLLKPKAAYELIGELKSA-VDLPIHLHTH 743 (1150)
T ss_dssp EEETTCCCCHHHHHHHHHHHHHH-CCSCEEEEEC
T ss_pred EcCccCCCCHHHHHHHHHHHHHh-cCCeEEEEeC
Confidence 7553 499999999999987 6788876543
No 454
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=27.87 E-value=1.4e+02 Score=29.02 Aligned_cols=124 Identities=13% Similarity=0.108 Sum_probs=71.0
Q ss_pred HHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECC-CCCccchHHHHHHHhh---CCC
Q psy15811 435 EALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC-VRPSHVSTLVRCIKQS---HPT 510 (581)
Q Consensus 435 Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC-~~p~~~~~~l~~l~~~---~~~ 510 (581)
+...+++.+++ .+.+|+.=+-+.| .|.+...+++.+ ...+++.+-|+| .+++.|..+++.+... +..
T Consensus 44 ~G~~~v~~Lk~-~g~~VflDlK~~D-----IpnTv~~a~~~~---~~~gad~vTVh~~~G~~~~~aa~~~~~~~~~~g~~ 114 (259)
T 3tfx_A 44 AGIDVIKKLTQ-QGYKIFLDLKMHD-----IPNTVYNGAKAL---AKLGITFTTVHALGGSQMIKSAKDGLIAGTPAGHS 114 (259)
T ss_dssp HCHHHHHHHHH-TTCEEEEEEEECS-----CHHHHHHHHHHH---HTTTCSEEEEEGGGCHHHHHHHHHHHHHHSCTTSC
T ss_pred cCHHHHHHHHH-CCCcEEEEecccc-----cchHHHHHHHHH---HhcCCCEEEEcCCCCHHHHHHHHHHHHHhcccCCC
Confidence 44556777777 4899988886654 356666666766 356889999999 5777777777777543 111
Q ss_pred Ce-E-EEe--eCCCCCcccccccccCCcCH-HHHHHHHHHHHHcCCcEEeecCCCchHHHHHHHHHHh
Q psy15811 511 VQ-T-IVY--PNKGGVWDSVHMKWLDTEDE-YSILHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMID 573 (581)
Q Consensus 511 ~p-l-~~y--pNag~~~~~~~~~~~~~~~~-~~~~~~~~~w~~~G~~iiGGCCGt~P~hI~al~~~l~ 573 (581)
.| + ++- -+.+. .+.....+ ...+. +...+.++.+.+.|+. |==|. |.+++.||+.+.
T Consensus 115 ~~~li~Vt~lTS~~~-~~l~~~~g-~~~~~~e~v~~~A~~a~~~G~d--GvV~s--~~e~~~ir~~~~ 176 (259)
T 3tfx_A 115 VPKLLAVTELTSISD-DVLRNEQN-CRLPMAEQVLSLAKMAKHSGAD--GVICS--PLEVKKLHENIG 176 (259)
T ss_dssp CCEEEEECSCTTCCH-HHHHHTSC-BSSCHHHHHHHHHHHHHHTTCC--EEECC--GGGHHHHHHHHC
T ss_pred CceEEEEEEeCCCCH-HHHHHHhC-CCCCHHHHHHHHHHHHHHhCCC--EEEEC--HHHHHHHHhhcC
Confidence 23 2 221 11110 00000001 11222 2345666777777863 22243 888999998874
No 455
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=27.84 E-value=1.4e+02 Score=28.12 Aligned_cols=79 Identities=6% Similarity=0.023 Sum_probs=49.2
Q ss_pred HHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCC
Q psy15811 156 PNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNC 235 (581)
Q Consensus 156 ~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC 235 (581)
++++..+++|+|++..- .. -..++++.++. +.|+++- + .+++++..+. ..|+++|++
T Consensus 89 d~~~~A~~aGAd~v~~p---~~--d~~v~~~~~~~-g~~~i~G--~---------~t~~e~~~A~----~~Gad~vk~-- 145 (225)
T 1mxs_A 89 SMFAAVEAAGAQFVVTP---GI--TEDILEAGVDS-EIPLLPG--I---------STPSEIMMGY----ALGYRRFKL-- 145 (225)
T ss_dssp HHHHHHHHHTCSSEECS---SC--CHHHHHHHHHC-SSCEECE--E---------CSHHHHHHHH----TTTCCEEEE--
T ss_pred HHHHHHHHCCCCEEEeC---CC--CHHHHHHHHHh-CCCEEEe--e---------CCHHHHHHHH----HCCCCEEEE--
Confidence 46777888999999743 22 13445555554 6777652 1 2366765443 578999999
Q ss_pred CChhh-H--HHHHHHHHhhCCCCceE
Q psy15811 236 VRPSH-V--STLVRCIKQSHPTVQTI 258 (581)
Q Consensus 236 ~~p~~-~--~~~l~~l~~~~~~~p~~ 258 (581)
.|.. + .+.|+.++....++|++
T Consensus 146 -FPa~~~~G~~~lk~i~~~~~~ipvv 170 (225)
T 1mxs_A 146 -FPAEISGGVAAIKAFGGPFGDIRFC 170 (225)
T ss_dssp -TTHHHHTHHHHHHHHHTTTTTCEEE
T ss_pred -ccCccccCHHHHHHHHhhCCCCeEE
Confidence 6632 3 46778777642356654
No 456
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=27.75 E-value=1.7e+02 Score=29.86 Aligned_cols=110 Identities=13% Similarity=0.066 Sum_probs=62.3
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEeccc----------CC------------HHH---HHHHHHHHHhcCC-CeEEEEE
Q psy15811 402 TEADLIAWHRPNVEALVRAGVDYLALETI----------PA------------EKE---ALALVKLLREFPG-QKAWLSF 455 (581)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~~gvD~i~~ET~----------p~------------~~E---a~a~~~~~~~~~~-~pv~iSf 455 (581)
+.+++.+.|.+.++...++|.|.|=+=-- |. ... +..+++++|+..+ -||.+-+
T Consensus 155 eI~~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRl 234 (361)
T 3gka_A 155 EIPGVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHL 234 (361)
T ss_dssp GHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEec
Confidence 45788889999999999999999854321 21 112 2345555554322 2888877
Q ss_pred EEcCC-CcCCCCCcHHHHHHHHHhhCCCCceEEEECCC--CCccchHHHHHHHhhCCCCeEEEe
Q psy15811 456 SCKDD-THTSHGELISSAVTSCLLANPDQIQAIGVNCV--RPSHVSTLVRCIKQSHPTVQTIVY 516 (581)
Q Consensus 456 t~~~~-~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~--~p~~~~~~l~~l~~~~~~~pl~~y 516 (581)
+..+. +-..++.+.++++..+..+...+++.|-+-.. ++ ..++.+++.. ++|+++-
T Consensus 235 s~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~----~~~~~ik~~~-~iPvi~~ 293 (361)
T 3gka_A 235 APRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESFGGD----AIGQQLKAAF-GGPFIVN 293 (361)
T ss_dssp CTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCSTT----CCHHHHHHHH-CSCEEEE
T ss_pred ccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCCCH----HHHHHHHHHc-CCCEEEe
Confidence 65332 11223445555554443334456776665552 22 3345565554 5786653
No 457
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=27.64 E-value=93 Score=30.78 Aligned_cols=48 Identities=17% Similarity=0.124 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhCCCCEEEeccc-CC--HHHHHHHHHHHHhcCCCeEEEEE
Q psy15811 408 AWHRPNVEALVRAGVDYLALETI-PA--EKEALALVKLLREFPGQKAWLSF 455 (581)
Q Consensus 408 ~~~~~~~~~l~~~gvD~i~~ET~-p~--~~Ea~a~~~~~~~~~~~pv~iSf 455 (581)
+...+.++.+.+.|.|+|++-|. -. ......++..+|+.+++|++++|
T Consensus 53 ~~~~~~~~~~~~sGtDai~VGS~~vt~~~~~~~~~v~~ik~~~~lPvil~f 103 (286)
T 3vk5_A 53 TEAVEKAAELTRLGFAAVLLASTDYESFESHMEPYVAAVKAATPLPVVLHF 103 (286)
T ss_dssp HHHHHHHHHHHHTTCSCEEEECSCCSSHHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEEccCCCCcchHHHHHHHHHHHHhCCCCEEEEC
No 458
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=27.58 E-value=1.7e+02 Score=28.00 Aligned_cols=121 Identities=8% Similarity=0.031 Sum_probs=70.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHH----HH-HHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHH
Q psy15811 401 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEK----EA-LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTS 475 (581)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~~gvD~i~~ET~p~~~----Ea-~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~ 475 (581)
++.+++.+.|.+. ..+.|++++|+-+.+. +. ....+.++. .+.||++-...+. | ++.+++..
T Consensus 111 ~~~~~i~~~~~~l-----~~~~D~vlIEGagGl~~pl~~~~~~~adla~~-l~~pVILV~~~~~------g-~i~~~~lt 177 (251)
T 3fgn_A 111 PARDQIVRLIADL-----DRPGRLTLVEGAGGLLVELAEPGVTLRDVAVD-VAAAALVVVTADL------G-TLNHTKLT 177 (251)
T ss_dssp CCHHHHHHHHHTT-----CCTTCEEEEECSSSTTCEEETTTEEHHHHHHH-TTCEEEEEECSST------T-HHHHHHHH
T ss_pred CCHHHHHHHHHHH-----HhcCCEEEEECCCCCcCCcCcccchHHHHHHH-cCCCEEEEEcCCC------c-cHHHHHHH
Confidence 4566666666542 3578999999976542 21 344556666 5899986664431 2 34444433
Q ss_pred HH--hhCCCCceEEEECCCC--Cccc-hHHHHHHHhhCCCCe-EEEeeCCCCCcccccccccCCcCHHHHHHHHHHHHH
Q psy15811 476 CL--LANPDQIQAIGVNCVR--PSHV-STLVRCIKQSHPTVQ-TIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLE 548 (581)
Q Consensus 476 l~--~~~~~~~~~iGiNC~~--p~~~-~~~l~~l~~~~~~~p-l~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 548 (581)
+. ...+..+.++-+|.+. |... ...++.|... +| +++-|... . ..++++|.+.+..|..
T Consensus 178 ~~~l~~~g~~i~GvIlN~v~~~~~~~~~~~~~~le~~---vpvLG~iP~~~-----~------~l~~~~~~~~~~~~~~ 242 (251)
T 3fgn_A 178 LEALAAQQVSCAGLVIGSWPDPPGLVAASNRSALARI---AMVRAALPAGA-----A------SLDAGDFAAMSAAAFD 242 (251)
T ss_dssp HHHHHHTTCCEEEEEEEEECSSCCHHHHHHHHHHHHH---SCEEEEEETTG-----G------GCCHHHHHHHHHHHSC
T ss_pred HHHHHhCCCCEEEEEEECCCCchhhhhhhHHHHHHHh---CCEEEEeeCCC-----C------cCCHHHHHHHHhcccc
Confidence 32 2345678888899963 3321 3334555544 45 55556532 1 2347789999999864
No 459
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=27.46 E-value=1.7e+02 Score=28.03 Aligned_cols=27 Identities=30% Similarity=0.448 Sum_probs=21.3
Q ss_pred CCChHHHHHHHHHHHHhccccccccc-cc
Q psy15811 38 TTEPEACVETHRDFIRAGADIIQSSC-YQ 65 (581)
Q Consensus 38 l~~Pe~v~~iH~~yl~AGAdiI~TnT-f~ 65 (581)
|+ +|.+...-+--.+||||.|.|.| |.
T Consensus 154 Lt-~eei~~a~~ia~~aGADfVKTSTGf~ 181 (239)
T 3ngj_A 154 LT-NEEKVEVCKRCVAAGAEYVKTSTGFG 181 (239)
T ss_dssp SC-HHHHHHHHHHHHHHTCSEEECCCSSS
T ss_pred CC-HHHHHHHHHHHHHHCcCEEECCCCCC
Confidence 44 45577777778899999999998 75
No 460
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A
Probab=27.44 E-value=1.2e+02 Score=29.83 Aligned_cols=51 Identities=18% Similarity=0.173 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHCC--CcEEEEEc---cCCHHHHHHHHHHHHhcCCC-cEEEE-EEEc
Q psy15811 151 IAWHRPNVEALVRAG--VDYLALET---IPAEKEALALVKLLREFPGQ-KAWLS-FSCK 202 (581)
Q Consensus 151 ~~~~~~q~~~l~~~g--vD~l~~ET---~~~~~E~~aa~~a~~~~~~~-pv~is-ft~~ 202 (581)
.+.+...++.|.+.| +|.|-++. .....+++.+++.+.+. ++ ||+|| +-+.
T Consensus 184 ~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~~~~~l~~~a~~-G~~pi~iTEldi~ 241 (303)
T 1i1w_A 184 TQAIVNRVKKWRAAGVPIDGIGSQTHLSAGQGASVLQALPLLASA-GTPEVAITELDVA 241 (303)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEECTTTHHHHHHHHHHHHTT-CCSEEEEEEEEET
T ss_pred HHHHHHHHHHHHHCCCcccEEEeccccCCCCHHHHHHHHHHHHHC-CCCeEEEEeCCcc
Confidence 456777888888888 59998876 45567788888877765 88 99997 5554
No 461
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A*
Probab=27.42 E-value=1.1e+02 Score=30.92 Aligned_cols=51 Identities=12% Similarity=0.117 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHCC--CcEEEEEc-----cCCHHHHHHHHHHHHhcCCCcEEEE-EEEc
Q psy15811 151 IAWHRPNVEALVRAG--VDYLALET-----IPAEKEALALVKLLREFPGQKAWLS-FSCK 202 (581)
Q Consensus 151 ~~~~~~q~~~l~~~g--vD~l~~ET-----~~~~~E~~aa~~a~~~~~~~pv~is-ft~~ 202 (581)
.+.+.++++.|.+.| +|.|-++. .++..+++.+++.+.+. ++||+|| +.+.
T Consensus 186 ~~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~p~~~~~~~~l~~~a~l-Gl~v~iTElDi~ 244 (331)
T 3emz_A 186 REKIYNLVRSLLDQGAPVHGIGMQGHWNIHGPSMDEIRQAIERYASL-DVQLHVTELDLS 244 (331)
T ss_dssp HHHHHHHHHHHHHHTCCCCEEEECCEEETTBSCHHHHHHHHHHHHTT-SCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCccceEEECceecCCCCCHHHHHHHHHHHHHc-CCcEEEeecccC
Confidence 456678899999888 69998774 36889999999999876 9999997 4443
No 462
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=27.32 E-value=1.2e+02 Score=29.87 Aligned_cols=58 Identities=16% Similarity=0.144 Sum_probs=38.9
Q ss_pred HHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEe
Q psy15811 159 EALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGV 233 (581)
Q Consensus 159 ~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGv 233 (581)
+..+++|+|+|.+-.| +..+.+.+++.++. ..|+.+| .|.+++.+-. +. ..|++.|++
T Consensus 210 ~eA~~aGaD~I~ld~~-~~~~~k~av~~v~~--~ipi~As----------GGIt~eni~~-~a---~tGvD~IsV 267 (286)
T 1x1o_A 210 EEALEAGADLILLDNF-PLEALREAVRRVGG--RVPLEAS----------GNMTLERAKA-AA---EAGVDYVSV 267 (286)
T ss_dssp HHHHHHTCSEEEEESC-CHHHHHHHHHHHTT--SSCEEEE----------SSCCHHHHHH-HH---HHTCSEEEC
T ss_pred HHHHHcCCCEEEECCC-CHHHHHHHHHHhCC--CCeEEEE----------cCCCHHHHHH-HH---HcCCCEEEE
Confidence 3344679999999997 55677777777652 5677652 3566665543 33 367888887
No 463
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=27.31 E-value=3.5e+02 Score=28.39 Aligned_cols=82 Identities=11% Similarity=0.097 Sum_probs=42.0
Q ss_pred CCCEEEecccCC-HHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECCCCCccchH
Q psy15811 421 GVDYLALETIPA-EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499 (581)
Q Consensus 421 gvD~i~~ET~p~-~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~~p~~~~~ 499 (581)
++|+|.+...+. ..+...+++.+++..++|+.+- . .+.+.++++++.. .+..++..+++ .+....
T Consensus 127 ~~D~ial~~~s~dpe~~~~vVk~V~e~~dvPL~ID--S------~dpevleaALea~---a~~~plI~sat---~dn~e~ 192 (446)
T 4djd_C 127 TIQAIAIRHDADDPAAFKAAVASVAAATQLNLVLM--A------DDPDVLKEALAGV---ADRKPLLYAAT---GANYEA 192 (446)
T ss_dssp CCCEEEEECCSSSTHHHHHHHHHHHTTCCSEEEEE--C------SCHHHHHHHHGGG---GGGCCEEEEEC---TTTHHH
T ss_pred cCcEEEEEeCCCCHHHHHHHHHHHHHhCCCCEEEe--c------CCHHHHHHHHHhh---cCcCCeeEecc---hhhHHH
Confidence 677777776533 6667777777776566664322 1 1223333333333 22334544444 333334
Q ss_pred HHHHHHhhCCCCeEEEeeC
Q psy15811 500 LVRCIKQSHPTVQTIVYPN 518 (581)
Q Consensus 500 ~l~~l~~~~~~~pl~~ypN 518 (581)
+++..+.. +.|+++..|
T Consensus 193 m~~lAa~y--~~pVi~~~~ 209 (446)
T 4djd_C 193 MTALAKEN--NCPLAVYGN 209 (446)
T ss_dssp HHHHHHHT--TCCEEEECS
T ss_pred HHHHHHHc--CCcEEEEec
Confidence 44444443 467777665
No 464
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=27.28 E-value=53 Score=31.63 Aligned_cols=49 Identities=4% Similarity=0.070 Sum_probs=37.9
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEE
Q psy15811 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAW 196 (581)
Q Consensus 145 ~~~~~~~~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~ 196 (581)
.+.+++.+...+.++.|.+.|+|++++=..+.-. .+++.+++..++||+
T Consensus 42 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTa~~---~~~~~lr~~~~iPvi 90 (255)
T 2jfz_A 42 KDPTTIKQFGLEALDFFKPHEIELLIVACNTASA---LALEEMQKYSKIPIV 90 (255)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCCSCEEECCHHHHH---HTHHHHHHHCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhhH---HHHHHHHHhCCCCEE
Confidence 5789999999999999999999999987643321 256677765588977
No 465
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=27.21 E-value=1.8e+02 Score=28.11 Aligned_cols=84 Identities=13% Similarity=0.033 Sum_probs=43.4
Q ss_pred HHHHHHCCCcEEEE-EccCC------HHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceE
Q psy15811 158 VEALVRAGVDYLAL-ETIPA------EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQA 230 (581)
Q Consensus 158 ~~~l~~~gvD~l~~-ET~~~------~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~ 230 (581)
++..++.|+|.+-+ +-+.+ ++|++.+.+++++. ++|+++- +..++.++..-.+.+.....+......|+|.
T Consensus 98 ve~Ai~~Ga~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~-~~~vIi~-~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~ 175 (263)
T 1w8s_A 98 VEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKF-DLPLVVE-SFPRGGKVVNETAPEIVAYAARIALELGADA 175 (263)
T ss_dssp HHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHHH-TCCEEEE-ECCCSTTCCCTTCHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHCCCCEEEEEEecCCcCHHHHHHHHHHHHHHHHHc-CCeEEEE-eeCCCCccccCCCHHHHHHHHHHHHHcCCCE
Confidence 45566889999843 43332 23344445555554 7898764 3333223311113443332222222578999
Q ss_pred EEeCCC-ChhhHHH
Q psy15811 231 IGVNCV-RPSHVST 243 (581)
Q Consensus 231 vGvNC~-~p~~~~~ 243 (581)
|++.-+ +++.+..
T Consensus 176 vkt~~~~~~e~~~~ 189 (263)
T 1w8s_A 176 MKIKYTGDPKTFSW 189 (263)
T ss_dssp EEEECCSSHHHHHH
T ss_pred EEEcCCCCHHHHHH
Confidence 999964 4544433
No 466
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=27.09 E-value=4.5e+02 Score=25.65 Aligned_cols=150 Identities=12% Similarity=0.095 Sum_probs=79.6
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEecccCC--HHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHH
Q psy15811 400 SMTEADLIAWHRPNVEALVRAGVDYLALETIPA--EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCL 477 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~~gvD~i~~ET~p~--~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~ 477 (581)
.++.++-.+. ++.|.+.|||.|=+ ++|. ..+...+....+...+.++ ..++ +.. -..++.+++.+
T Consensus 23 ~~~~~~K~~i----~~~L~~~Gv~~IE~-g~p~~~~~d~e~v~~i~~~~~~~~i-~~l~-~~~-----~~di~~a~~~~- 89 (293)
T 3ewb_X 23 NFDVKEKIQI----ALQLEKLGIDVIEA-GFPISSPGDFECVKAIAKAIKHCSV-TGLA-RCV-----EGDIDRAEEAL- 89 (293)
T ss_dssp CCCHHHHHHH----HHHHHHHTCSEEEE-ECGGGCHHHHHHHHHHHHHCCSSEE-EEEE-ESS-----HHHHHHHHHHH-
T ss_pred CCCHHHHHHH----HHHHHHcCCCEEEE-eCCCCCccHHHHHHHHHHhcCCCEE-EEEe-cCC-----HHHHHHHHHHH-
Confidence 3566666544 55566789998733 2343 3455554444444334332 2332 211 11356666655
Q ss_pred hhCCCCceEEEECC-CCCcc---------------chHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHH
Q psy15811 478 LANPDQIQAIGVNC-VRPSH---------------VSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILH 541 (581)
Q Consensus 478 ~~~~~~~~~iGiNC-~~p~~---------------~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~ 541 (581)
...++..|.+-. +++.+ +.+.++..+..+ ..+.+.+- +. ...+++.+.+
T Consensus 90 --~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g--~~v~~~~~-----d~------~~~~~~~~~~ 154 (293)
T 3ewb_X 90 --KDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKF--DVVQFSPE-----DA------TRSDRAFLIE 154 (293)
T ss_dssp --TTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTC--SCEEEEEE-----TG------GGSCHHHHHH
T ss_pred --hhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCC--CEEEEEec-----cC------CCCCHHHHHH
Confidence 345556555433 22222 122222233332 33333221 11 1345788899
Q ss_pred HHHHHHHcCCcEEeecC---CCchHHHHHHHHHHhcccC
Q psy15811 542 YVPQWLEEGVNIIGGCC---EVTSYEIQQMRIMIDEFNT 577 (581)
Q Consensus 542 ~~~~w~~~G~~iiGGCC---Gt~P~hI~al~~~l~~~~~ 577 (581)
.++...+.|+..|.=|= ..+|..+..+-+.++..-|
T Consensus 155 ~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~ 193 (293)
T 3ewb_X 155 AVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIK 193 (293)
T ss_dssp HHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcC
Confidence 99999999998875443 3689999988777765443
No 467
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=26.98 E-value=3.9e+02 Score=24.97 Aligned_cols=136 Identities=13% Similarity=0.077 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEecccC--------CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHH
Q psy15811 403 EADLIAWHRPNVEALVRAGVDYLALETIP--------AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVT 474 (581)
Q Consensus 403 ~~~~~~~~~~~~~~l~~~gvD~i~~ET~p--------~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~ 474 (581)
.+.+.+.+++.++...+.||. |.+|+++ +..++..+++.+. -| .+.++++.......|.++.+.++
T Consensus 128 ~~~~~~~l~~l~~~a~~~gv~-l~lEn~~~~~~~~~~~~~~~~~l~~~~~----~~-~~g~~~D~~h~~~~g~d~~~~l~ 201 (290)
T 2qul_A 128 VDRAIESVRRVIKVAEDYGII-YALEVVNRFEQWLCNDAKEAIAFADAVD----SP-ACKVQLDTFHMNIEETSFRDAIL 201 (290)
T ss_dssp HHHHHHHHHTTHHHHHHHTCE-EEEECCCTTTCSSCCSHHHHHHHHHHHC----CT-TEEEEEEHHHHHHHCSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCE-EEEEeCccccccccCCHHHHHHHHHHcC----CC-CEEEEEEchhhhhcCCCHHHHHH
Confidence 455666666666666677885 6779875 4566665555543 22 24455433333345788888887
Q ss_pred HHHhhCCCCceEEEECCC-------CCccchHHHHHHHhhCCCCeEEEeeCCCCC--cccccccccCC----c--CHHHH
Q psy15811 475 SCLLANPDQIQAIGVNCV-------RPSHVSTLVRCIKQSHPTVQTIVYPNKGGV--WDSVHMKWLDT----E--DEYSI 539 (581)
Q Consensus 475 ~l~~~~~~~~~~iGiNC~-------~p~~~~~~l~~l~~~~~~~pl~~ypNag~~--~~~~~~~~~~~----~--~~~~~ 539 (581)
.+ ...+..|=++-. +--....+++.|+..+.+.++++-...... ...+-..|..- . ++...
T Consensus 202 ~~----~~~i~~vH~~D~~~~~~G~G~id~~~~~~~L~~~gy~g~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (290)
T 2qul_A 202 AC----KGKMGHFHLGEANRLPPGEGRLPWDEIFGALKEIGYDGTIVMEPFMRKGGSVSRAVGVWRDMSNGATDEEMDER 277 (290)
T ss_dssp HT----TTTEEEEEECCTTSCCTTSSCSCHHHHHHHHHHTTCCSCEEECCCCCCSSHHHHHTTCCSCCSTTCCHHHHHHH
T ss_pred HH----HhheeEEEEccCCCCCCCCCCcCHHHHHHHHHHhCCCceEEEEecCcccchhhhhhhhccccccCCCCCCHHHH
Confidence 65 334444444431 222466778888876545677765443221 11111235432 3 45556
Q ss_pred HHHHHHHHH
Q psy15811 540 LHYVPQWLE 548 (581)
Q Consensus 540 ~~~~~~w~~ 548 (581)
+....++++
T Consensus 278 ~~~s~~~l~ 286 (290)
T 2qul_A 278 ARRSLQFVR 286 (290)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 665555543
No 468
>2jfn_A Glutamate racemase; cell WALL, isomerase, cell shape, UDP- murnac-Ala, peptidoglycan biosynthesis, peptidoglycan synthesis; HET: GLU UMA; 1.9A {Escherichia coli}
Probab=26.92 E-value=91 Score=30.56 Aligned_cols=50 Identities=16% Similarity=0.013 Sum_probs=37.7
Q ss_pred CCCHHHHHHHHHHHHHHHHh-CCCCEEEecccCCHHHHHHHHHHHHhcCCCeEE
Q psy15811 400 SMTEADLIAWHRPNVEALVR-AGVDYLALETIPAEKEALALVKLLREFPGQKAW 452 (581)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~-~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~ 452 (581)
..+.+++.+.-...++.|++ .|+|+|++-....-. .+++.+|+..++||+
T Consensus 62 ~~s~~~i~~~~~~i~~~ll~~~g~d~IviaCNTas~---~~l~~lr~~~~iPVi 112 (285)
T 2jfn_A 62 EKSEAFIVERVVAIVTAVQERYPLALAVVACNTAST---VSLPALREKFDFPVV 112 (285)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHHHH---HHHHHHHHHCSSCEE
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCCCEEEEECccccH---HHHHHHHHhCCCCEE
Confidence 36789999999999998765 899999987654321 356777765688876
No 469
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3
Probab=26.85 E-value=2.7e+02 Score=27.97 Aligned_cols=51 Identities=10% Similarity=0.071 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHCC--CcEEEEEcc----CCH---HHHHHHHHHHHhcCCCcEEEE-EEEc
Q psy15811 151 IAWHRPNVEALVRAG--VDYLALETI----PAE---KEALALVKLLREFPGQKAWLS-FSCK 202 (581)
Q Consensus 151 ~~~~~~q~~~l~~~g--vD~l~~ET~----~~~---~E~~aa~~a~~~~~~~pv~is-ft~~ 202 (581)
.+.+.+.++.|++.| +|.|-+..- ... .+++..++.+.+. ++||+|| +-+.
T Consensus 208 ~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~~~~~~~~~~~~l~~~a~~-G~pi~iTEldi~ 268 (347)
T 1xyz_A 208 SNAVFNMIKSMKERGVPIDGVGFQCHFINGMSPEYLASIDQNIKRYAEI-GVIVSFTEIDIR 268 (347)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEESSCCHHHHHHHHHHHHHHHHT-TCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCCcceEEEeeecCCCCCchhHHHHHHHHHHHHhc-CCceEEEecccc
Confidence 456777888888888 599877532 122 5788888888775 8999997 4443
No 470
>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A
Probab=26.73 E-value=3.6e+02 Score=25.12 Aligned_cols=96 Identities=17% Similarity=0.130 Sum_probs=57.2
Q ss_pred HHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEe
Q psy15811 154 HRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGV 233 (581)
Q Consensus 154 ~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGv 233 (581)
|.+.++..++. +|++=+|-.. ........+.++.. +..+++|+.--+ .+++-+.+.+.+.++. ..|+ .+=+
T Consensus 73 ~~~ll~~~~~~-~d~iDvEl~~-~~~~~~l~~~~~~~-g~kvI~S~Hdf~--~tp~~~el~~~~~~~~---~~ga-ivKi 143 (219)
T 2egz_A 73 REELFEELSPL-SDYTDIELSS-RGLLVKLYNITKEA-GKKLIISYHNFE--LTPPNWIIREVLREGY---RYGG-IPKI 143 (219)
T ss_dssp HHHHHHHHTTT-SSEEEEETTC-HHHHHHHHHHHHHT-TCEEEEEEEESS--CCCCHHHHHHHHHHHH---HTTS-EEEE
T ss_pred HHHHHHHHHhc-CCEEEEEccC-CccHHHHHHHHHHc-CCEEEEEecCCC--CCcCHHHHHHHHHHHH---HcCC-EEEE
Confidence 45555556677 9999999755 22244556666653 688999986432 2333233444444443 3555 5555
Q ss_pred CCC--ChhhHHHHHHHHHhhCCCCceEEe
Q psy15811 234 NCV--RPSHVSTLVRCIKQSHPTVQTIVY 260 (581)
Q Consensus 234 NC~--~p~~~~~~l~~l~~~~~~~p~~~~ 260 (581)
-+. .+++...+++...+ .+.|++.+
T Consensus 144 a~~a~~~~D~l~ll~~~~~--~~~P~I~~ 170 (219)
T 2egz_A 144 AVKANSYEDVARLLCISRQ--VEGEKILI 170 (219)
T ss_dssp EEECSSHHHHHHHHHHHTT--SCSCBEEE
T ss_pred EEccCCHHHHHHHHHHHHh--CCCCEEEE
Confidence 553 57777777776654 35677665
No 471
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=26.72 E-value=68 Score=31.52 Aligned_cols=49 Identities=8% Similarity=0.073 Sum_probs=37.6
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEE
Q psy15811 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAW 196 (581)
Q Consensus 145 ~~~~~~~~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~ 196 (581)
.+.+++.+.-.+.++.|.+.|+|+|++=..+.-. .+++.+++..++||+
T Consensus 64 ~s~~~i~~~~~~~~~~L~~~g~d~IVIaCNTas~---~~l~~lr~~~~iPVi 112 (286)
T 2jfq_A 64 RPGEQVKQYTVEIARKLMEFDIKMLVIACNTATA---VALEYLQKTLSISVI 112 (286)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHHH---HHHHHHHHHCSSEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCchhH---HHHHHHHHhCCCCEE
Confidence 6789999999999999999999999986543321 246777765578877
No 472
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=26.47 E-value=65 Score=33.35 Aligned_cols=14 Identities=14% Similarity=0.349 Sum_probs=10.3
Q ss_pred HHHHHHCCCcEEEE
Q psy15811 158 VEALVRAGVDYLAL 171 (581)
Q Consensus 158 ~~~l~~~gvD~l~~ 171 (581)
++.+.++|||.|.+
T Consensus 266 A~~a~~aGad~I~v 279 (392)
T 2nzl_A 266 AREAVKHGLNGILV 279 (392)
T ss_dssp HHHHHHTTCCEEEE
T ss_pred HHHHHHcCCCEEEe
Confidence 56666778888777
No 473
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=26.41 E-value=4.6e+02 Score=25.68 Aligned_cols=95 Identities=15% Similarity=0.098 Sum_probs=57.9
Q ss_pred HHHHHHHhCCC-CEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEEC
Q psy15811 412 PNVEALVRAGV-DYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490 (581)
Q Consensus 412 ~~~~~l~~~gv-D~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiN 490 (581)
+.+.+..++|. .+|..+++++..++...++.+++.++.|+-+.+.+.+. + ....+.+.++.+.+. ++++|-++
T Consensus 30 ~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~--~-~~~~~~~~~~~~~~~---g~d~V~~~ 103 (328)
T 2gjl_A 30 EMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPT--Q-KPVPYAEYRAAIIEA---GIRVVETA 103 (328)
T ss_dssp HHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCC--S-SCCCHHHHHHHHHHT---TCCEEEEE
T ss_pred HHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecccc--c-cCccHHHHHHHHHhc---CCCEEEEc
Confidence 45666666665 55555677778888888888887677898888877521 0 123356666666322 45555555
Q ss_pred CCCCccchHHHHHHHhhCCCCeEEEee
Q psy15811 491 CVRPSHVSTLVRCIKQSHPTVQTIVYP 517 (581)
Q Consensus 491 C~~p~~~~~~l~~l~~~~~~~pl~~yp 517 (581)
...| ...++.++.. +++++...
T Consensus 104 ~g~p---~~~~~~l~~~--gi~vi~~v 125 (328)
T 2gjl_A 104 GNDP---GEHIAEFRRH--GVKVIHKC 125 (328)
T ss_dssp ESCC---HHHHHHHHHT--TCEEEEEE
T ss_pred CCCc---HHHHHHHHHc--CCCEEeeC
Confidence 4334 3455666554 46666543
No 474
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=26.36 E-value=4.7e+02 Score=25.68 Aligned_cols=119 Identities=12% Similarity=0.128 Sum_probs=64.7
Q ss_pred EEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEEEcc-----CCHHHHHHHHHHHHhcCCCc
Q psy15811 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI-----PAEKEALALVKLLREFPGQK 194 (581)
Q Consensus 120 VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~ET~-----~~~~E~~aa~~a~~~~~~~p 194 (581)
|--=|-|.+..+ ..+.+|+...- +.++.+.+.|+|.|.|=-+ -|.+-++..+++++ .++
T Consensus 92 V~vMIRPRgGdF------------~Ys~~E~~~M~-~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~---~l~ 155 (287)
T 3iwp_A 92 VFVMIRPRGGDF------------LYSDREIEVMK-ADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICR---PLP 155 (287)
T ss_dssp EEEECCSSSSCS------------CCCHHHHHHHH-HHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHT---TSC
T ss_pred eEEEEecCCCCc------------ccCHHHHHHHH-HHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcC---CCc
Confidence 333466777533 24566665554 5688899999999988743 24444454555443 355
Q ss_pred EEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCCCh--hhHHHHHHHHHhhCCCCceEEecCCC
Q psy15811 195 AWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP--SHVSTLVRCIKQSHPTVQTIVYPNKG 264 (581)
Q Consensus 195 v~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~~p--~~~~~~l~~l~~~~~~~p~~~~pnag 264 (581)
+..--.|+. . .++.++++.+.+ .+++-|...=..| ..=.+.|++|.+. .+..|.+.|-.|
T Consensus 156 vTFHRAFD~---~---~d~~~Ale~Li~---lGvdrILTSG~~~~a~~Gl~~Lk~Lv~~-a~~rI~ImaGGG 217 (287)
T 3iwp_A 156 VTFHRAFDM---V---HDPMAALETLLT---LGFERVLTSGCDSSALEGLPLIKRLIEQ-AKGRIVVMPGGG 217 (287)
T ss_dssp EEECGGGGG---C---SCHHHHHHHHHH---HTCSEEEECTTSSSTTTTHHHHHHHHHH-HTTSSEEEECTT
T ss_pred EEEECchhc---c---CCHHHHHHHHHH---cCCCEEECCCCCCChHHhHHHHHHHHHH-hCCCCEEEECCC
Confidence 433223442 1 236677877765 4677776643322 2223556666543 233344444444
No 475
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=26.31 E-value=83 Score=30.58 Aligned_cols=49 Identities=8% Similarity=0.045 Sum_probs=37.1
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEE
Q psy15811 145 MTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAW 196 (581)
Q Consensus 145 ~~~~~~~~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~ 196 (581)
.+.+++.....+.++.|.+.|+|++++=..+.-. .+++.+++..++||+
T Consensus 54 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTas~---~~l~~lr~~~~iPvi 102 (273)
T 2oho_A 54 RPKKQIKEYTWELVNFLLTQNVKMIVFACNTATA---VAWEEVKAALDIPVL 102 (273)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHH---HHHHHHHHHCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchHhH---HHHHHHHHhCCCCEE
Confidence 5679999999999999999999999986543221 236677655578877
No 476
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=26.26 E-value=4.4e+02 Score=28.28 Aligned_cols=44 Identities=23% Similarity=0.224 Sum_probs=28.0
Q ss_pred HHHHHHHHHhCCCCEEEe-cccCC----HHHHHHHHHHHHhcCCCeEEEE
Q psy15811 410 HRPNVEALVRAGVDYLAL-ETIPA----EKEALALVKLLREFPGQKAWLS 454 (581)
Q Consensus 410 ~~~~~~~l~~~gvD~i~~-ET~p~----~~Ea~a~~~~~~~~~~~pv~iS 454 (581)
+.++++.++++||++|-+ |--.+ ...++.+.+..++ .+.|++|.
T Consensus 27 l~~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~l~~l~~~-~~v~liIN 75 (540)
T 3nl6_A 27 LYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHA-HNVPLIIN 75 (540)
T ss_dssp HHHHHHHHHHTTCSEEEECCSSSCTTHHHHHHHHHHHHHHH-TTCCEEEC
T ss_pred HHHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHHHHh-cCCEEEEe
Confidence 457888888999999977 32222 2334444444455 58888874
No 477
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=26.21 E-value=1.8e+02 Score=28.30 Aligned_cols=91 Identities=21% Similarity=0.258 Sum_probs=49.9
Q ss_pred HHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEE----
Q psy15811 412 PNVEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI---- 487 (581)
Q Consensus 412 ~~~~~l~~~gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~i---- 487 (581)
.-++.+.++|+|.+++=++|. .|....++.++++ +++.+ .+ +. .-++.+. ++.+. ....+...+
T Consensus 110 ~f~~~~~~aG~dGviv~Dl~~-ee~~~~~~~~~~~-gl~~i-~l-ia------p~s~~er-i~~ia-~~~~gfiy~vs~~ 177 (271)
T 1ujp_A 110 RFFGLFKQAGATGVILPDLPP-DEDPGLVRLAQEI-GLETV-FL-LA------PTSTDAR-IATVV-RHATGFVYAVSVT 177 (271)
T ss_dssp HHHHHHHHHTCCEEECTTCCG-GGCHHHHHHHHHH-TCEEE-CE-EC------TTCCHHH-HHHHH-TTCCSCEEEECC-
T ss_pred HHHHHHHHcCCCEEEecCCCH-HHHHHHHHHHHHc-CCceE-EE-eC------CCCCHHH-HHHHH-HhCCCCEEEEecC
Confidence 445556778999998888886 7788888888874 66533 22 11 1233332 22221 123333322
Q ss_pred ---EECCCCCccchHHHHHHHhhCCCCeEEE
Q psy15811 488 ---GVNCVRPSHVSTLVRCIKQSHPTVQTIV 515 (581)
Q Consensus 488 ---GiNC~~p~~~~~~l~~l~~~~~~~pl~~ 515 (581)
|..-..+..+..+|+.++... +.|+++
T Consensus 178 G~TG~~~~~~~~~~~~v~~vr~~~-~~Pv~v 207 (271)
T 1ujp_A 178 GVTGMRERLPEEVKDLVRRIKART-ALPVAV 207 (271)
T ss_dssp -----------CCHHHHHHHHTTC-CSCEEE
T ss_pred cccCCCCCCCccHHHHHHHHHhhc-CCCEEE
Confidence 111111334567888888876 688765
No 478
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=25.94 E-value=4.6e+02 Score=26.32 Aligned_cols=64 Identities=17% Similarity=0.143 Sum_probs=42.3
Q ss_pred HHHHHHHHC--CCcEEEEEcc-CCHHHHHHHHHHHHhc-CCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEE
Q psy15811 156 PNVEALVRA--GVDYLALETI-PAEKEALALVKLLREF-PGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 231 (581)
Q Consensus 156 ~q~~~l~~~--gvD~l~~ET~-~~~~E~~aa~~a~~~~-~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~v 231 (581)
++++.+++. |+|++.+.+. .+.......++.+|+. +++|+++-. ..+.+++.... ..|+|+|
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~----------v~t~e~A~~a~----~aGaD~I 186 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGN----------VVTGEMVEELI----LSGADII 186 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEE----------ECSHHHHHHHH----HTTCSEE
T ss_pred HHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEe----------CCCHHHHHHHH----HhCCCEE
Confidence 577888887 9999888743 3445566677777754 378888632 23566665433 3688888
Q ss_pred Ee
Q psy15811 232 GV 233 (581)
Q Consensus 232 Gv 233 (581)
-|
T Consensus 187 ~v 188 (351)
T 2c6q_A 187 KV 188 (351)
T ss_dssp EE
T ss_pred EE
Confidence 66
No 479
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=25.93 E-value=2.4e+02 Score=27.99 Aligned_cols=101 Identities=16% Similarity=0.195 Sum_probs=56.8
Q ss_pred HHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCC-C--cCC--CCCCHHHHHHHHHh-hCCCCceEE
Q psy15811 158 VEALVRAGVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDD-T--HTS--HGELISSAVTSCLL-ANPDQIQAI 231 (581)
Q Consensus 158 ~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~~~~pv~isft~~~~-g--~l~--~G~~~~~~~~~~~~-~~~~~~~~v 231 (581)
++.+.+.|+|++.+=.....+-++++++++++....|-++-.++-.. . .+. ...++.+.+..+.. +...|++
T Consensus 96 v~~~a~lGaD~vTVHa~~G~~~m~aa~e~a~~~~~~~~llaVtvLTS~s~~~l~~l~~~~~~e~V~~lA~~a~~~G~d-- 173 (303)
T 3ru6_A 96 CEEVSKLGVDMINIHASAGKIAIQEVMTRLSKFSKRPLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYENGLD-- 173 (303)
T ss_dssp HHHHHTTTCSEEEEEGGGCHHHHHHHHHHHTTSSSCCEEEEECSCTTCCHHHHHHHHSSCHHHHHHHHHHHHHHTTCS--
T ss_pred HHHHHhcCCCEEEEeccCCHHHHHHHHHHHHhcCCCceEEEEEEecCCCHHHHHHHHcCCHHHHHHHHHHHHHHcCCC--
Confidence 44577889999999998888888889999876534455544433221 0 110 12345555544322 2234544
Q ss_pred EeCCCChhhHHHHHHHHHhhCCCCceEEecCCCc
Q psy15811 232 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGV 265 (581)
Q Consensus 232 GvNC~~p~~~~~~l~~l~~~~~~~p~~~~pnag~ 265 (581)
||=|+ |..+ +.+++...+.++.+-|-=++
T Consensus 174 GvV~s-~~E~----~~IR~~~~~~fl~VTPGIr~ 202 (303)
T 3ru6_A 174 GMVCS-VFES----KKIKEHTSSNFLTLTPGIRP 202 (303)
T ss_dssp EEECC-TTTH----HHHHHHSCTTSEEEECCCCT
T ss_pred EEEEC-HHHH----HHHHHhCCCccEEECCCcCc
Confidence 67786 4332 33443323345666775554
No 480
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A*
Probab=25.87 E-value=1.2e+02 Score=30.46 Aligned_cols=48 Identities=13% Similarity=0.060 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhCC--CCEEEecc-----cCCHHHHHHHHHHHHhcCCCeEEEEE
Q psy15811 407 IAWHRPNVEALVRAG--VDYLALET-----IPAEKEALALVKLLREFPGQKAWLSF 455 (581)
Q Consensus 407 ~~~~~~~~~~l~~~g--vD~i~~ET-----~p~~~Ea~a~~~~~~~~~~~pv~iSf 455 (581)
.+.+...++.|.+.| +|.|-+.. .|+..+.+.+++.+.. .++||+||=
T Consensus 186 ~~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~p~~~~~~~~l~~~a~-lGl~v~iTE 240 (331)
T 3emz_A 186 REKIYNLVRSLLDQGAPVHGIGMQGHWNIHGPSMDEIRQAIERYAS-LDVQLHVTE 240 (331)
T ss_dssp HHHHHHHHHHHHHHTCCCCEEEECCEEETTBSCHHHHHHHHHHHHT-TSCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCccceEEECceecCCCCCHHHHHHHHHHHHH-cCCcEEEee
Confidence 356678888888777 69998773 4788899999999887 699999885
No 481
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3
Probab=25.79 E-value=2.8e+02 Score=27.22 Aligned_cols=51 Identities=14% Similarity=0.130 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHCC--CcEEEEEcc-----CCHHHHHHHHHHHHhcCCC-cEEEE-EEEc
Q psy15811 151 IAWHRPNVEALVRAG--VDYLALETI-----PAEKEALALVKLLREFPGQ-KAWLS-FSCK 202 (581)
Q Consensus 151 ~~~~~~q~~~l~~~g--vD~l~~ET~-----~~~~E~~aa~~a~~~~~~~-pv~is-ft~~ 202 (581)
.+.+.+.++.|.+.| +|.|-+..- +...+++.+++.+.+. ++ ||+|| +-+.
T Consensus 183 ~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~~~~~~~l~~~a~~-G~~pi~iTEldi~ 242 (303)
T 1ta3_B 183 TQAMASYVKKWLAEGVPIDGIGSQAHYSSSHWSSTEAAGALSSLANT-GVSEVAITELDIA 242 (303)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEECTTCCCGGGHHHHHHHHHTT-CCSEEEEEEEEET
T ss_pred HHHHHHHHHHHHHCCCCcceEEEeeecCCCCCCHHHHHHHHHHHHHC-CCCeEEEeeCCcC
Confidence 466778889898988 599987542 2346788888888765 88 99997 5554
No 482
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=25.54 E-value=78 Score=32.42 Aligned_cols=16 Identities=6% Similarity=0.252 Sum_probs=10.9
Q ss_pred HHHHHHHHCCCcEEEE
Q psy15811 156 PNVEALVRAGVDYLAL 171 (581)
Q Consensus 156 ~q~~~l~~~gvD~l~~ 171 (581)
+-++.+.++|||.|.+
T Consensus 241 e~a~~a~~~Gad~I~v 256 (368)
T 2nli_A 241 EDADMAIKRGASGIWV 256 (368)
T ss_dssp HHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEE
Confidence 3456666778888776
No 483
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=25.39 E-value=4.3e+02 Score=24.86 Aligned_cols=149 Identities=11% Similarity=0.092 Sum_probs=80.6
Q ss_pred CCCHHHHHHH---HHHHHHHHHhCCCCEEEec-ccCC----HHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHH
Q psy15811 400 SMTEADLIAW---HRPNVEALVRAGVDYLALE-TIPA----EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISS 471 (581)
Q Consensus 400 ~~~~~~~~~~---~~~~~~~l~~~gvD~i~~E-T~p~----~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~ 471 (581)
..+.+++.++ ..+.++.|.++|+|+|++- |..+ ..-.+.+.+.+++..++|+. + +...
T Consensus 42 ~~t~e~l~~~~~~l~~aa~~L~~ag~d~i~~aCtsas~~~G~~~~~~~~~~l~~~~~iPv~-~-------------~~~A 107 (240)
T 3ixl_A 42 SVTPEGYDAVIESVVDHARRLQKQGAAVVSLMCTSLSFYRGAAFNAALTVAMREATGLPCT-T-------------MSTA 107 (240)
T ss_dssp CSSHHHHHHHGGGHHHHHHHHHHTTEEEEEECCHHHHHTTCHHHHHHHHHHHHHHHSSCEE-E-------------HHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCCCEEEECCcHHHHhcccchHHHHHHHHHhccCCCEE-C-------------HHHH
Confidence 4677777776 4666888888999999997 3322 22234566667655689977 2 1233
Q ss_pred HHHHHHhhCCCCceEEEECCCCCccchHHH-HHHHhhCCCCeEEEeeCCCCCcccccccccCCcCHHHHHHHHHH-H-HH
Q psy15811 472 AVTSCLLANPDQIQAIGVNCVRPSHVSTLV-RCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQ-W-LE 548 (581)
Q Consensus 472 ~~~~l~~~~~~~~~~iGiNC~~p~~~~~~l-~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~-w-~~ 548 (581)
.+..+... +..-|||=..-...+...+ +.+... ++.+......+.. +.- .. ...+++.+.+.+++ . ..
T Consensus 108 ~~~al~~~---g~~rvglltpy~~~~~~~~~~~l~~~--Giev~~~~~~~~~-~~~-~~--~~~~~~~~~~~~~~~l~~~ 178 (240)
T 3ixl_A 108 VLNGLRAL---GVRRVALATAYIDDVNERLAAFLAEE--SLVPTGCRSLGIT-GVE-AM--ARVDTATLVDLCVRAFEAA 178 (240)
T ss_dssp HHHHHHHT---TCSEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEEECCCC-CHH-HH--HTCCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHh---CCCEEEEEeCChHHHHHHHHHHHHHC--CCEEeccccCCCC-Ccc-hh--hcCCHHHHHHHHHHHhhcC
Confidence 34444222 3334566543223333333 334444 4554443333322 111 11 12346788888888 5 34
Q ss_pred cC--CcEEeecCCCchH-HHHHHHHHH
Q psy15811 549 EG--VNIIGGCCEVTSY-EIQQMRIMI 572 (581)
Q Consensus 549 ~G--~~iiGGCCGt~P~-hI~al~~~l 572 (581)
.| +-++| |-.-..- .|..+.+.+
T Consensus 179 ~~adaivL~-CT~l~~l~~i~~le~~l 204 (240)
T 3ixl_A 179 PDSDGILLS-SGGLLTLDAIPEVERRL 204 (240)
T ss_dssp TTCSEEEEE-CTTSCCTTHHHHHHHHH
T ss_pred CCCCEEEEe-CCCCchhhhHHHHHHHh
Confidence 45 45566 7665554 356665554
No 484
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=25.38 E-value=3.5e+02 Score=27.81 Aligned_cols=113 Identities=13% Similarity=0.104 Sum_probs=62.5
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEeccc----------CC------------HHH---HHHHHHHHHhcCC-CeEEEEE
Q psy15811 402 TEADLIAWHRPNVEALVRAGVDYLALETI----------PA------------EKE---ALALVKLLREFPG-QKAWLSF 455 (581)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~~gvD~i~~ET~----------p~------------~~E---a~a~~~~~~~~~~-~pv~iSf 455 (581)
+.+++.+.|.+.++...++|.|.|=+=-- |. ... +..+++++++..+ .||.+-+
T Consensus 165 eI~~ii~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRl 244 (402)
T 2hsa_B 165 EISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRV 244 (402)
T ss_dssp GHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence 35677788999999999999999854321 22 223 3455556664332 3888777
Q ss_pred EEcCC-CcCCCCCcHHHHHHHHHhhCCCC------ceEEEECCC-------CCc-------cchHHHHHHHhhCCCCeEE
Q psy15811 456 SCKDD-THTSHGELISSAVTSCLLANPDQ------IQAIGVNCV-------RPS-------HVSTLVRCIKQSHPTVQTI 514 (581)
Q Consensus 456 t~~~~-~~l~~G~~~~~~~~~l~~~~~~~------~~~iGiNC~-------~p~-------~~~~~l~~l~~~~~~~pl~ 514 (581)
+..+. .-+.+|.++++++..+..+...+ ++.|-+-.. .|. .-...++.+++.. ++|++
T Consensus 245 s~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~-~iPvi 323 (402)
T 2hsa_B 245 SPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAY-QGTFI 323 (402)
T ss_dssp CSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHC-SSCEE
T ss_pred ccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHC-CCCEE
Confidence 65322 11334566666555443333334 665555331 121 1123456677665 57876
Q ss_pred E
Q psy15811 515 V 515 (581)
Q Consensus 515 ~ 515 (581)
+
T Consensus 324 ~ 324 (402)
T 2hsa_B 324 C 324 (402)
T ss_dssp E
T ss_pred E
Confidence 5
No 485
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=25.38 E-value=3.4e+02 Score=26.98 Aligned_cols=97 Identities=13% Similarity=0.083 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHCCCcEEEEEccCCHHH--HHHHHHHHHh-cCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCc
Q psy15811 152 AWHRPNVEALVRAGVDYLALETIPAEKE--ALALVKLLRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQI 228 (581)
Q Consensus 152 ~~~~~q~~~l~~~gvD~l~~ET~~~~~E--~~aa~~a~~~-~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~ 228 (581)
+.-...+++..+.|+.+.+=|-.+.+++ ...-.+.+++ .++.|+++++.. |.+.......+. ..++
T Consensus 73 ~~~~~~a~aa~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pv~~~i~~--------~~~~~~~~~~~~---~~ga 141 (349)
T 1p0k_A 73 EINKSLARAASQAGIPLAVGSQMSALKDPSERLSYEIVRKENPNGLIFANLGS--------EATAAQAKEAVE---MIGA 141 (349)
T ss_dssp HHHHHHHHHHHHHTCCEECCCCTTTTTCHHHHHHHHHHHHHCSSSCEEEEEET--------TCCHHHHHHHHH---HTTC
T ss_pred HHHHHHHHHHHHcCCcEEeccchhcccCcccccceehhhhhCCCceeEEeecC--------CCCHHHHHHHHH---hcCC
Confidence 3344555666778988644342222222 2223344442 357899987642 344544443333 3567
Q ss_pred eEEEeCCCChh------------hHHHHHHHHHhhCCCCceEEe
Q psy15811 229 QAIGVNCVRPS------------HVSTLVRCIKQSHPTVQTIVY 260 (581)
Q Consensus 229 ~~vGvNC~~p~------------~~~~~l~~l~~~~~~~p~~~~ 260 (581)
++|-+|+.+|. .+.+.++.+++. .++|++++
T Consensus 142 d~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~-~~~Pv~vK 184 (349)
T 1p0k_A 142 NALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSR-VSVPVIVK 184 (349)
T ss_dssp SEEEEEECTTTTC--------CTTHHHHHHHHHHH-CSSCEEEE
T ss_pred CeEEecccchhhhcCCCCCcchHHHHHHHHHHHHH-cCCCEEEE
Confidence 88888876442 145677777765 67888876
No 486
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3
Probab=25.31 E-value=1.8e+02 Score=28.54 Aligned_cols=50 Identities=12% Similarity=0.248 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHCC--CcEEEEEcc-----CCHHHHHHHHHHHHhcCCCcEEEE-EEEc
Q psy15811 152 AWHRPNVEALVRAG--VDYLALETI-----PAEKEALALVKLLREFPGQKAWLS-FSCK 202 (581)
Q Consensus 152 ~~~~~q~~~l~~~g--vD~l~~ET~-----~~~~E~~aa~~a~~~~~~~pv~is-ft~~ 202 (581)
..+...++.|.+.| +|.|-+..- +...+++.+++.+.+. ++||+|| +-+.
T Consensus 182 ~~~~~~v~~l~~~G~~iDgIG~q~H~~~~~~~~~~~~~~l~~~a~~-g~pi~iTE~di~ 239 (302)
T 1nq6_A 182 NAVYEMVKDFKQRGVPIDCVGFQSHFNSNSPVPSDFQANLQRFADL-GVDVQITELDIE 239 (302)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHHHHHHHTT-TCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCCcceEEEEEeecCCCCCHHHHHHHHHHHHhc-CCcEEEeeCCCC
Confidence 34557788888777 699988532 2356677777777654 8999997 4444
No 487
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=25.24 E-value=4.5e+02 Score=25.10 Aligned_cols=128 Identities=14% Similarity=0.039 Sum_probs=69.0
Q ss_pred HHHHHHhCCCCEEEe-cccCC------HHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCce
Q psy15811 413 NVEALVRAGVDYLAL-ETIPA------EKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQ 485 (581)
Q Consensus 413 ~~~~l~~~gvD~i~~-ET~p~------~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~ 485 (581)
.++..++.|+|.|-+ +.+.+ +.|++.+.+..+++ ++|+++- +..+..++.+--+.+.....+......+++
T Consensus 97 ~ve~Ai~~Ga~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~-~~~vIi~-~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD 174 (263)
T 1w8s_A 97 SVEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKF-DLPLVVE-SFPRGGKVVNETAPEIVAYAARIALELGAD 174 (263)
T ss_dssp CHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHHH-TCCEEEE-ECCCSTTCCCTTCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHCCCCEEEEEEecCCcCHHHHHHHHHHHHHHHHHc-CCeEEEE-eeCCCCccccCCCHHHHHHHHHHHHHcCCC
Confidence 345566789988733 32232 55666666666664 8998765 322222332111333333322112335778
Q ss_pred EEEECCCCCccchHHHHHHHhhCCCC-eEEEeeCCCCCcccccccccCCcCHHHHHHHHHHHHHcCCcEEeecCCC
Q psy15811 486 AIGVNCVRPSHVSTLVRCIKQSHPTV-QTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEV 560 (581)
Q Consensus 486 ~iGiNC~~p~~~~~~l~~l~~~~~~~-pl~~ypNag~~~~~~~~~~~~~~~~~~~~~~~~~w~~~G~~iiGGCCGt 560 (581)
.|++.-. . -...++.+.... +. |+.+-. | .. ..+.+++.+.+..-++.|+. |=++|.
T Consensus 175 ~vkt~~~--~-~~e~~~~~~~~~-~~~pV~asG--G-i~---------~~~~~~~l~~i~~~~~aGA~--Gvsvgr 232 (263)
T 1w8s_A 175 AMKIKYT--G-DPKTFSWAVKVA-GKVPVLMSG--G-PK---------TKTEEDFLKQVEGVLEAGAL--GIAVGR 232 (263)
T ss_dssp EEEEECC--S-SHHHHHHHHHHT-TTSCEEEEC--C-SC---------CSSHHHHHHHHHHHHHTTCC--EEEESH
T ss_pred EEEEcCC--C-CHHHHHHHHHhC-CCCeEEEEe--C-CC---------CCCHHHHHHHHHHHHHcCCe--EEEEeh
Confidence 8888842 1 224556666554 34 865543 2 11 11356777788888888987 555553
No 488
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=25.10 E-value=2e+02 Score=28.75 Aligned_cols=91 Identities=11% Similarity=0.100 Sum_probs=55.6
Q ss_pred HCCCcEEEEEc-cCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC----C
Q psy15811 163 RAGVDYLALET-IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV----R 237 (581)
Q Consensus 163 ~~gvD~l~~ET-~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~----~ 237 (581)
+.|||.|.+-+ ...++++..+++.+|+. +..+..+++.. .+....-.-+ ..+.+ ...|++.|.+-=+ .
T Consensus 98 ~~Gvd~~ri~~~~~nle~~~~~v~~ak~~-G~~v~~~~~~~-~~~~~~~~~l----~~~~~-~~~G~~~i~l~Dt~G~~~ 170 (320)
T 3dxi_A 98 IGLVDMIRIAIDPQNIDRAIVLAKAIKTM-GFEVGFNVMYM-SKWAEMNGFL----SKLKA-IDKIADLFCMVDSFGGIT 170 (320)
T ss_dssp TTTCSEEEEEECGGGHHHHHHHHHHHHTT-TCEEEEEECCT-TTGGGSTTSG----GGGGG-GTTTCSEEEEECTTSCCC
T ss_pred hcCCCEEEEEecHHHHHHHHHHHHHHHHC-CCEEEEEEEeC-CCCCCHHHHH----HHHHH-hhCCCCEEEECcccCCCC
Confidence 48999986654 33467777777778875 66654444321 1111111122 22222 1357888877664 4
Q ss_pred hhhHHHHHHHHHhhCCCCceEEec
Q psy15811 238 PSHVSTLVRCIKQSHPTVQTIVYP 261 (581)
Q Consensus 238 p~~~~~~l~~l~~~~~~~p~~~~p 261 (581)
|..+..+++.+++. .++||.+..
T Consensus 171 P~~~~~lv~~l~~~-~~~~i~~H~ 193 (320)
T 3dxi_A 171 PKEVKNLLKEVRKY-THVPVGFHG 193 (320)
T ss_dssp HHHHHHHHHHHHHH-CCSCEEEEC
T ss_pred HHHHHHHHHHHHHh-CCCeEEEEe
Confidence 99999999999986 567776653
No 489
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=24.83 E-value=6e+02 Score=26.35 Aligned_cols=133 Identities=19% Similarity=0.212 Sum_probs=0.0
Q ss_pred HHHHHhccccccccccccccccHhhcCCCHHHHHHHHHHHHHHHHHHhhhhcCCCcccccccccccCCCeEEEeecCCcC
Q psy15811 49 RDFIRAGADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128 (581)
Q Consensus 49 ~~yl~AGAdiI~TnTf~a~~~~l~~~g~~~~~~~~i~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~~~~~VagsiGP~g 128 (581)
+.-+++|++ ..+.|-+..+.+.+..+ ....+++.+.+.+..+.+++. ...|..++.-..
T Consensus 117 ~~A~~aG~~--~V~i~~s~Sd~~~~~~l-~~s~~e~l~~~~~~v~~ak~~------------------G~~V~~~~eda~ 175 (423)
T 3ivs_A 117 RVAVETGVD--GVDVVIGTSQYLRKYSH-GKDMTYIIDSATEVINFVKSK------------------GIEVRFSSEDSF 175 (423)
T ss_dssp HHHHHTTCS--EEEEEEEC--------------CHHHHHHHHHHHHHHTT------------------TCEEEEEEESGG
T ss_pred HHHHHcCCC--EEEEEeeccHHHHHHHc-CCCHHHHHHHHHHHHHHHHHC------------------CCEEEEEEccCc
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEE-EEEccC--CHHHHHHHHHHHHhcCCCcEEEEEEEcCCC
Q psy15811 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYL-ALETIP--AEKEALALVKLLREFPGQKAWLSFSCKDDT 205 (581)
Q Consensus 129 ~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l-~~ET~~--~~~E~~aa~~a~~~~~~~pv~isft~~~~g 205 (581)
. .+.+.+ .+.++.+.+.|+|.| +--|+. ...++...++.+++..+.| ++|-+-++
T Consensus 176 r---------------~d~~~~----~~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~~~~~--i~~H~Hnd- 233 (423)
T 3ivs_A 176 R---------------SDLVDL----LSLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGVVSCD--IECHFHND- 233 (423)
T ss_dssp G---------------SCHHHH----HHHHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHHCSSE--EEEEEBCT-
T ss_pred C---------------CCHHHH----HHHHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHhhcCCe--EEEEECCC-
Q ss_pred cCCCCCCHHHHHHHHHhhCCCCceEE
Q psy15811 206 HTSHGELISSAVTSCLLANPDQIQAI 231 (581)
Q Consensus 206 ~l~~G~~~~~~~~~~~~~~~~~~~~v 231 (581)
.|..+..++.++. .|++.|
T Consensus 234 ---~GlAvAN~laAv~----aGa~~v 252 (423)
T 3ivs_A 234 ---TGMAIANAYCALE----AGATHI 252 (423)
T ss_dssp ---TSCHHHHHHHHHH----TTCCEE
T ss_pred ---CchHHHHHHHHHH----hCCCEE
No 490
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=24.77 E-value=5.5e+02 Score=25.91 Aligned_cols=52 Identities=19% Similarity=0.333 Sum_probs=37.2
Q ss_pred CCChHHHHHHHHHHHHhcccccccccccc--ccccHhhcCCCHHHHHHHHHHHHHHHHHHhhhh
Q psy15811 38 TTEPEACVETHRDFIRAGADIIQSSCYQA--NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKE 99 (581)
Q Consensus 38 l~~Pe~v~~iH~~yl~AGAdiI~TnTf~a--~~~~l~~~g~~~~~~~~i~~~av~lA~~a~~~~ 99 (581)
++++|...++-+.--++|||++..-+|.. ++..+. |+. ..+.++.++++.++
T Consensus 116 ~es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~--glg--------~egl~~l~~~~~e~ 169 (350)
T 1vr6_A 116 VEGREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQ--GLG--------EKGLEYLREAADKY 169 (350)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCC--CCT--------HHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhc--CCC--------HHHHHHHHHHHHHc
Confidence 77899999999999999999998888764 332222 221 35667777777763
No 491
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=24.72 E-value=4.2e+02 Score=24.57 Aligned_cols=105 Identities=10% Similarity=0.048 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEecccC-------------CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcH
Q psy15811 403 EADLIAWHRPNVEALVRAGVDYLALETIP-------------AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELI 469 (581)
Q Consensus 403 ~~~~~~~~~~~~~~l~~~gvD~i~~ET~p-------------~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~ 469 (581)
.+.+.+.+++.++...+.||. |.+|+++ +..++..+++.+. -| .+.++++.......|.++
T Consensus 117 ~~~~~~~l~~l~~~a~~~Gv~-l~lE~~~~~~~~~~~~~~~~~~~~~~~l~~~v~----~~-~vg~~~D~~h~~~~g~~~ 190 (281)
T 3u0h_A 117 ISQLARRIRQVAVELLPLGMR-VGLEYVGPHHLRHRRYPFVQSLADLKTFWEAIG----AP-NVGALVDSYHWYTAGEHE 190 (281)
T ss_dssp HHHHHHHHHHHHHHHGGGTCE-EEEECCCCGGGCCSSEECCCSHHHHHHHHHHHC----CT-TEEEEEEHHHHHHTTCCH
T ss_pred HHHHHHHHHHHHHHHHHcCCE-EEEEeccccccccccccccCCHHHHHHHHHHcC----CC-CeeEEeehhHHHHcCCCH
Confidence 455666667777766778986 5669874 4556555555443 22 245555444445567788
Q ss_pred HHHHHHHHhhCCCCceEEEECCC-----------------CCccchHHHHHHHhhCCCCeEEEee
Q psy15811 470 SSAVTSCLLANPDQIQAIGVNCV-----------------RPSHVSTLVRCIKQSHPTVQTIVYP 517 (581)
Q Consensus 470 ~~~~~~l~~~~~~~~~~iGiNC~-----------------~p~~~~~~l~~l~~~~~~~pl~~yp 517 (581)
.+.++.+ ...+..|=++-. +.-.+..+++.|+..+-+.|+++-.
T Consensus 191 ~~~~~~~----~~~i~~vHl~D~~~~~~~~~~~~~~~~G~G~id~~~~~~~L~~~gy~g~~~lE~ 251 (281)
T 3u0h_A 191 DDLAQLP----PEKVVYVHINDTRDAPEDAHDGKRLLPGDGRIPLVPFLRGLYLAGYRGPVAAEV 251 (281)
T ss_dssp HHHHTSC----GGGEEEEEECBCSSCTTTCCTTSCBCTTSSSSCHHHHHHHHHHHTCCSEEEECC
T ss_pred HHHHhcC----cccEEEEEecCCCCCcccchhccCcCCCCcCcCHHHHHHHHHHcCCCCcEEEEe
Confidence 7776643 223333444321 2224667788888765556776643
No 492
>2yv4_A Hypothetical protein PH0435; alpha and beta proteins (A+B), SUA5 domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=24.70 E-value=1.2e+02 Score=25.01 Aligned_cols=45 Identities=20% Similarity=0.223 Sum_probs=32.9
Q ss_pred CHHHHHHHHHHHHHHHHHCCCcEEEEEccCCHHHHHHHHHHHHhc
Q psy15811 146 TEADLIAWHRPNVEALVRAGVDYLALETIPAEKEALALVKLLREF 190 (581)
Q Consensus 146 ~~~~~~~~~~~q~~~l~~~gvD~l~~ET~~~~~E~~aa~~a~~~~ 190 (581)
+.+++......-++.|=+.|+|.|++|.+|....-.++.+-+++.
T Consensus 53 ~~~~~A~~Lf~~LR~~D~~~~~~I~~e~~p~~g~g~Ai~nRL~kA 97 (105)
T 2yv4_A 53 SVEEVAKNLFKALRYMDKAGVDVVIAEGVEERGLGLAVMNRLRKA 97 (105)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCSEEEEEEESGGGHHHHHHHHC---
T ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEeCCCCcChHHHHHHHHHHh
Confidence 556666666666677767899999999999987777887777764
No 493
>2fds_A Orotidine-monophosphate-decarboxylase; TIM barrel, structural genomics, structural genomics consortium, SGC, unknown function; 1.72A {Plasmodium berghei} SCOP: c.1.2.3 PDB: 2aqw_A
Probab=24.14 E-value=1.1e+02 Score=31.12 Aligned_cols=166 Identities=8% Similarity=-0.014 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHhC------CCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHH
Q psy15811 403 EADLIAWHRPNVEALVRA------GVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSC 476 (581)
Q Consensus 403 ~~~~~~~~~~~~~~l~~~------gvD~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l 476 (581)
+.-+.+|-+..++.+.+. |.+++.-+-..-+...+.+++.+++ .+.+|+.=+-+.| .|.+...+++.+
T Consensus 101 ~~~~~~f~~~iida~~~~v~~vKvg~~lf~~~G~~gv~~L~~~i~~lk~-~g~~VflDlK~~D-----IgnTv~~ya~a~ 174 (352)
T 2fds_A 101 FYFFNHFCFYIINNTKEYALIYKMNFAFYIPYGSVGINALKNVFDYLNS-MNIPTMLDMKIND-----IGNTVKNYRKFI 174 (352)
T ss_dssp HHHHHHHHHHHHHHHGGGCSEEEEEGGGTGGGTHHHHHHHHHHHHHHHH-TTCCEEEEEEECC-----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccccCEEEecHHHHHhCCHHHHHHHHHHHHHHHH-CCCeEEEEeecCc-----hHHHHHHHHHHH
Q ss_pred HhhCCCCceEEEECC-CCCccchHHHH-HHHhhCCCCeEEEe-eCCCCCcccccccccCCcCHHHHHHHHHHHH-HcCCc
Q psy15811 477 LLANPDQIQAIGVNC-VRPSHVSTLVR-CIKQSHPTVQTIVY-PNKGGVWDSVHMKWLDTEDEYSILHYVPQWL-EEGVN 552 (581)
Q Consensus 477 ~~~~~~~~~~iGiNC-~~p~~~~~~l~-~l~~~~~~~pl~~y-pNag~~~~~~~~~~~~~~~~~~~~~~~~~w~-~~G~~ 552 (581)
....+++++-|++ .+...|.++++ .-...+..+.+++. .|-+..--..........--+.+.+.+.+|. +.|+.
T Consensus 175 --~~~lgaD~vTVh~~~G~~sl~~a~~~~a~~~gkgv~lLa~TSn~~~~dlq~~~~~~g~~l~~~v~~~v~~la~~~G~d 252 (352)
T 2fds_A 175 --FEYLKSDSCTINVYMGTSMLKDICFDYEKNKYYSAYVLIKTTNKDSFIFQNELSINDKQAYIVMAEETQKMATDLKID 252 (352)
T ss_dssp --HTTSCCSEEEECCTTCSTTHHHHSEETTTTEECEEEEEEECSSGGGHHHHTTCEETTEEHHHHHHHHHHHHHHHHTTG
T ss_pred --HhhcCCCEEEEeCCCCHHHHHHHHHHHhhccCCceEEEEEeCCcCHHHHHHhhccCCCcHHHHHHHHHHHHHHHhCCC
Q ss_pred ----EEeecCCC-chHHHHHHHHHHhccc
Q psy15811 553 ----IIGGCCEV-TSYEIQQMRIMIDEFN 576 (581)
Q Consensus 553 ----iiGGCCGt-~P~hI~al~~~l~~~~ 576 (581)
-+|=-||. .|+.++.|++....+.
T Consensus 253 ~~~~~~GvVvGaTs~~e~~~iR~~~~~~~ 281 (352)
T 2fds_A 253 QNNEFIGFVVGSNAFEEMKIIRNKFPDSY 281 (352)
T ss_dssp GGTCCEEEEECTTCHHHHHHHHHHSTTCC
T ss_pred ccCCcceEEEcCCCHHHHHHHHHhCCCCE
No 494
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=24.02 E-value=4e+02 Score=27.90 Aligned_cols=80 Identities=16% Similarity=0.135 Sum_probs=50.2
Q ss_pred CCEEEeccc-CCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECCCCCccchHH
Q psy15811 422 VDYLALETI-PAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTL 500 (581)
Q Consensus 422 vD~i~~ET~-p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~~p~~~~~~ 500 (581)
+|+|.+-.. .+...++.+++.+++..++|+.+- .+-.-++.+++.. .+..+. ||-...+.+..+
T Consensus 128 aD~I~l~~~~~dpe~~~~~Vk~V~e~~dvPlsID---------~dp~vleaale~~---~d~~pL---Ins~t~en~~~~ 192 (445)
T 2h9a_A 128 VNLVALKGSSQDAATFAKAVATAREVTDLPFILI---------GTPEQLAAALETE---GANNPL---LYAATADNYEQM 192 (445)
T ss_dssp CCEEEEECTTCCHHHHHHHHHHHHHHCCSCEEEE---------SCHHHHHHHHHHH---GGGCCE---EEEECTTTHHHH
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEE---------CCHHHHHHHHHhc---CCCCCE---EEECCHHHHHHH
Confidence 999988865 458888999999998678897543 2344455555554 222334 444333445555
Q ss_pred HHHHHhhCCCCeEEEeeC
Q psy15811 501 VRCIKQSHPTVQTIVYPN 518 (581)
Q Consensus 501 l~~l~~~~~~~pl~~ypN 518 (581)
++..+.. +.|+++.+.
T Consensus 193 ~~la~~y--~~~vV~~~~ 208 (445)
T 2h9a_A 193 VELAKKY--NVPLTVSAK 208 (445)
T ss_dssp HHHHHHH--TCCEEEECS
T ss_pred HHHHHHh--CCeEEEEcC
Confidence 5555555 367777664
No 495
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=23.97 E-value=4.3e+02 Score=24.39 Aligned_cols=128 Identities=13% Similarity=0.029 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEecccC-----------CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHH
Q psy15811 403 EADLIAWHRPNVEALVRAGVDYLALETIP-----------AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISS 471 (581)
Q Consensus 403 ~~~~~~~~~~~~~~l~~~gvD~i~~ET~p-----------~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~ 471 (581)
.+.+.+.+++.++...+.||. |.+|+++ +..++..+++.+. . .+.++++. +++..+.++.+
T Consensus 118 ~~~~~~~l~~l~~~a~~~gv~-l~lE~~~~~~~~~~~~~~~~~~~~~l~~~~~---~---~vg~~~D~-~h~~~~~d~~~ 189 (275)
T 3qc0_A 118 RRMVVEGIAAVLPHARAAGVP-LAIEPLHPMYAADRACVNTLGQALDICETLG---P---GVGVAIDV-YHVWWDPDLAN 189 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHTCC-EEECCCCGGGTTTTBSCCCHHHHHHHHHHHC---T---TEEEEEEH-HHHTTCTTHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCE-EEEeECCCcccCCccccCCHHHHHHHHHHhC---c---ccEEEEEh-hhheeCCCHHH
Confidence 355666666666666677996 5679753 3555555544442 2 34555533 33333567777
Q ss_pred HHHHHHhhCCCCceEEEECC----------------CCCccchHHHHHHHhhCCCCeEEEeeCCCCCcccccccccCCcC
Q psy15811 472 AVTSCLLANPDQIQAIGVNC----------------VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTED 535 (581)
Q Consensus 472 ~~~~l~~~~~~~~~~iGiNC----------------~~p~~~~~~l~~l~~~~~~~pl~~ypNag~~~~~~~~~~~~~~~ 535 (581)
.++.+.. ...+..|=++- .+--.+..+++.|+..+-+.++++-..... +-| ..+
T Consensus 190 ~l~~~~~--~~~i~~vH~~D~~~~~~~~~~~r~~~G~G~id~~~~~~~L~~~gy~g~~~~E~~~~~------~~~--~~~ 259 (275)
T 3qc0_A 190 QIARAGK--MKAILAHHICDWLVPTKDMLTDRGMMGDGVIDLKGIRRRIEAAGFHGAQEVEIFSAD------NWW--KRP 259 (275)
T ss_dssp HHHHHHH--TTCEEEEEECBCCSSCCCSSSBCBCTTSSCCCHHHHHHHHHHTTCCCCEEECCCBTT------TGG--GSC
T ss_pred HHHHcCc--cceEEEEEecCCCCCcccccCCCcCCCCCccCHHHHHHHHHHcCCCceEEEEecCcc------ccc--cCC
Confidence 7777631 01222233322 122235667788877654556665433210 112 124
Q ss_pred HHHHHHHHHHHHH
Q psy15811 536 EYSILHYVPQWLE 548 (581)
Q Consensus 536 ~~~~~~~~~~w~~ 548 (581)
|.+..+.+.+|++
T Consensus 260 ~~~~~~~~~~~l~ 272 (275)
T 3qc0_A 260 ADEVIATCVERYR 272 (275)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 6666666666543
No 496
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=23.96 E-value=2.4e+02 Score=27.99 Aligned_cols=90 Identities=9% Similarity=0.116 Sum_probs=56.5
Q ss_pred HHHHHHHhCCC-CEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEEC
Q psy15811 412 PNVEALVRAGV-DYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVN 490 (581)
Q Consensus 412 ~~~~~l~~~gv-D~i~~ET~p~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiN 490 (581)
+.+.+..++|. ++|..+. -+..++...++.+++.++.|+.+.+.+.+ ..+.+.++.+. ..++++|-++
T Consensus 27 ~la~av~~aG~lG~i~~~~-~~~~~~~~~i~~i~~~~~~p~gvnl~~~~-------~~~~~~~~~a~---~~g~d~V~~~ 95 (332)
T 2z6i_A 27 DLAGAVSKAGGLGIIGGGN-APKEVVKANIDKIKSLTDKPFGVNIMLLS-------PFVEDIVDLVI---EEGVKVVTTG 95 (332)
T ss_dssp HHHHHHHHHTSBEEEECTT-CCHHHHHHHHHHHHHHCCSCEEEEECTTS-------TTHHHHHHHHH---HTTCSEEEEC
T ss_pred HHHHHHHhCCCcEEeCCCC-CCHHHHHHHHHHHHHhcCCCEEEEecCCC-------CCHHHHHHHHH---HCCCCEEEEC
Confidence 44555666665 6665554 45677777788888767789988876522 13666677663 3477888888
Q ss_pred CCCCccchHHHHHHHhhCCCCeEEEee
Q psy15811 491 CVRPSHVSTLVRCIKQSHPTVQTIVYP 517 (581)
Q Consensus 491 C~~p~~~~~~l~~l~~~~~~~pl~~yp 517 (581)
+..|..+... ++.. +.|+++.-
T Consensus 96 ~g~p~~~i~~---l~~~--g~~v~~~v 117 (332)
T 2z6i_A 96 AGNPSKYMER---FHEA--GIIVIPVV 117 (332)
T ss_dssp SSCGGGTHHH---HHHT--TCEEEEEE
T ss_pred CCChHHHHHH---HHHc--CCeEEEEe
Confidence 8666555444 4433 46666543
No 497
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=23.90 E-value=3.1e+02 Score=25.92 Aligned_cols=144 Identities=10% Similarity=-0.063 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCCCCCceEEeccCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCC
Q psy15811 344 ADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVD 423 (581)
Q Consensus 344 ~~~~~l~~~av~lA~~A~~~~~~~~~~~~~v~VagsiGP~g~~~~~g~eY~g~y~~~~~~~~~~~~~~~~~~~l~~~gvD 423 (581)
++..+..+..+++|++.-.++ +.+....+++....++ ..-..+.+.+.+++.++...+.||
T Consensus 100 ~~~~~~~~~~i~~a~~lGa~~---------v~~~~g~~~~~~~~p~---------~~~~~~~~~~~l~~l~~~a~~~Gv- 160 (287)
T 3kws_A 100 KECMDTMKEIIAAAGELGSTG---------VIIVPAFNGQVPALPH---------TMETRDFLCEQFNEMGTFAAQHGT- 160 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTCSE---------EEECSCCTTCCSBCCS---------SHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHHHcCCCE---------EEEecCcCCcCCCCCC---------HHHHHHHHHHHHHHHHHHHHHcCC-
Q ss_pred EEEecccC--------CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCcCCCCCcHHHHHHHHHhhCCCCceEEEECCC---
Q psy15811 424 YLALETIP--------AEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV--- 492 (581)
Q Consensus 424 ~i~~ET~p--------~~~Ea~a~~~~~~~~~~~pv~iSft~~~~~~l~~G~~~~~~~~~l~~~~~~~~~~iGiNC~--- 492 (581)
-|.+|+++ +..++..+++.+..- .+.++++.......|.++.+.++.+ ...+..|=++-.
T Consensus 161 ~l~lE~~~~~~~~~~~~~~~~~~ll~~v~~~-----~vg~~~D~~h~~~~g~d~~~~l~~~----~~~i~~vHlkD~~~r 231 (287)
T 3kws_A 161 SVIFEPLNRKECFYLRQVADAASLCRDINNP-----GVRCMGDFWHMTWEETSDMGAFISG----GEYLQHVHVASRKRR 231 (287)
T ss_dssp CEEECCCCTTTCSSCCCHHHHHHHHHHHCCT-----TEEEEEEHHHHHHHCSCHHHHHHHH----GGGEEEEEECCTTTS
T ss_pred EEEEEecCcccCcccCCHHHHHHHHHHcCCC-----CeeEEeehHHHHhcCCCHHHHHHHh----hhhEEEEEeCCCCCC
Q ss_pred -----CC--ccchHHHHHHHhhCCCCeEEE
Q psy15811 493 -----RP--SHVSTLVRCIKQSHPTVQTIV 515 (581)
Q Consensus 493 -----~p--~~~~~~l~~l~~~~~~~pl~~ 515 (581)
+- -.+..+++.|+..+-+.++++
T Consensus 232 ~~pG~G~d~id~~~i~~~L~~~gy~g~i~l 261 (287)
T 3kws_A 232 SMPGEDGDADNYINGFKGLKMIGYNNYVSF 261 (287)
T ss_dssp CSTTTTGGGCCCHHHHHHHHHTTCCSEEEE
T ss_pred CCCCCCCCCcCHHHHHHHHHHcCCCccEEE
No 498
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=23.87 E-value=3.4e+02 Score=26.07 Aligned_cols=79 Identities=19% Similarity=0.194 Sum_probs=53.5
Q ss_pred HHHHHHHCCCcEEEEE---ccCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEe
Q psy15811 157 NVEALVRAGVDYLALE---TIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGV 233 (581)
Q Consensus 157 q~~~l~~~gvD~l~~E---T~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGv 233 (581)
.++.....|+|++++- ...+.+.+...+.+++.. +.+++| -+.. ..+ . -+.++.+ .++++|.+
T Consensus 29 ~~e~a~~~g~D~vilDlEhav~~~~k~~~~l~a~~~~-~~~~~V--RVn~------~~~-~-di~~~ld---~G~~gI~l 94 (261)
T 3qz6_A 29 IVRIYAEAGLDYFIVDCEHAAYTFREINHLVSVAKNA-GVSVLV--RIPQ------VDR-A-HVQRLLD---IGAEGFMI 94 (261)
T ss_dssp HHHHHHHTTCSEEEEESSSSCCCHHHHHHHHHHHHHH-TCEEEE--ECSS------CCH-H-HHHHHHH---HTCCEEEE
T ss_pred HHHHHhcCCcCEEEEeccCCCCCHHHHHHHHHHHhhc-CCeEEE--EeCC------CCH-H-HHHHHHh---cCCCEEEE
Confidence 3566777899999985 566777777777777643 566666 2222 222 2 2344443 67899999
Q ss_pred CCC-ChhhHHHHHHHHH
Q psy15811 234 NCV-RPSHVSTLVRCIK 249 (581)
Q Consensus 234 NC~-~p~~~~~~l~~l~ 249 (581)
--+ .++++..+.+.++
T Consensus 95 P~v~saed~~~~~~~~~ 111 (261)
T 3qz6_A 95 PGVQSAETMRETVRLAK 111 (261)
T ss_dssp TTCCSHHHHHHHHHHHS
T ss_pred CCcCCHHHHHHHHHHhc
Confidence 887 7999988888774
No 499
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=23.78 E-value=5.8e+02 Score=25.85 Aligned_cols=73 Identities=12% Similarity=0.089 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHCCCcEEEEEc-------cCCHHHHHHHHHHHHhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCC
Q psy15811 153 WHRPNVEALVRAGVDYLALET-------IPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANP 225 (581)
Q Consensus 153 ~~~~q~~~l~~~gvD~l~~ET-------~~~~~E~~aa~~a~~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~ 225 (581)
.+.+.++.|.+.|+|+|-+=. ++. . +..+|+..+.||++ +|.+ +.+++.+.+. .
T Consensus 267 ~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~-----~-~~~ir~~~~iPvi~------~G~i----t~~~a~~~l~---~ 327 (379)
T 3aty_A 267 LTKHLCKKIEPLSLAYLHYLRGDMVNQQIGD-----V-VAWVRGSYSGVKIS------NLRY----DFEEADQQIR---E 327 (379)
T ss_dssp HHHHHHHHHGGGCCSEEEEECSCTTSCCCCC-----H-HHHHHTTCCSCEEE------ESSC----CHHHHHHHHH---T
T ss_pred HHHHHHHHHHHhCCCEEEEcCCCcCCCCccH-----H-HHHHHHHCCCcEEE------ECCC----CHHHHHHHHH---c
Confidence 356667888889999986532 222 2 45566555788875 2333 4666655443 4
Q ss_pred CCceEEEeCC---CChhhHHHH
Q psy15811 226 DQIQAIGVNC---VRPSHVSTL 244 (581)
Q Consensus 226 ~~~~~vGvNC---~~p~~~~~~ 244 (581)
..+|.|++-= ..|+...++
T Consensus 328 g~aD~V~igR~~l~~P~l~~k~ 349 (379)
T 3aty_A 328 GKVDAVAFGAKFIANPDLVERA 349 (379)
T ss_dssp TSCSEEEESHHHHHCTTHHHHH
T ss_pred CCCeEEEecHHHHhCcHHHHHH
Confidence 5588888864 257654443
No 500
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=23.63 E-value=5.4e+02 Score=25.39 Aligned_cols=155 Identities=9% Similarity=0.075 Sum_probs=0.0
Q ss_pred CCChHHHHHHHHHHHHhcccccccccccccccc--------HhhcCCCHHHHHHHHHHHHHHHHHHhhhhcCCCcccccc
Q psy15811 38 TTEPEACVETHRDFIRAGADIIQSSCYQANVDN--------LTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNK 109 (581)
Q Consensus 38 l~~Pe~v~~iH~~yl~AGAdiI~TnTf~a~~~~--------l~~~g~~~~~~~~i~~~av~lA~~a~~~~~~~~~~~~~~ 109 (581)
++++|.+.++-+..-++|+++..---|.++.++ ++-.|+ +++.++.+++++++
T Consensus 51 ies~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~---------~~GL~~L~~~~~e~---------- 111 (298)
T 3fs2_A 51 METRDHAFEMAGRLKEMTDKLGIGLVYKSSFDKANRTSLKAARGIGL---------EKALEVFSDLKKEY---------- 111 (298)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTCCEEEECBCCCCC---------CCH---------HHHHHHHHHHHHHH----------
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCcEEEEcccccCCCCCCCCcCCcCH---------HHHHHHHHHHHHhc----------
Q ss_pred cccccCCCeEEEeecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEEEc--cCCHHHHHHHHHHH
Q psy15811 110 TFNLLTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET--IPAEKEALALVKLL 187 (581)
Q Consensus 110 ~~~~~~~~~~VagsiGP~g~~~~~~~ey~~~y~~~~~~~~~~~~~~~q~~~l~~~gvD~l~~ET--~~~~~E~~aa~~a~ 187 (581)
.+-++-++ +..++++.+.+- ||++-+=. +.+.. .++.+
T Consensus 112 -------GLpv~Tev----------------------------~D~~~v~~l~~~-vd~lkIgA~~~~n~~----LLr~v 151 (298)
T 3fs2_A 112 -------GFPVLTDI----------------------------HTEEQCAAVAPV-VDVLQIPAFLCRQTD----LLIAA 151 (298)
T ss_dssp -------CCCEEEEC----------------------------CSHHHHHHHTTT-CSEEEECGGGTTCHH----HHHHH
T ss_pred -------CCeEEEEe----------------------------CCHHHHHHHHhh-CCEEEECccccCCHH----HHHHH
Q ss_pred HhcCCCcEEEEEEEcCCCcCCCCCCHHHHHHHHHhhCCCCceEEEeCCC---ChhhH---HHHHHHHHhhCCCCceEEec
Q psy15811 188 REFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCV---RPSHV---STLVRCIKQSHPTVQTIVYP 261 (581)
Q Consensus 188 ~~~~~~pv~isft~~~~g~l~~G~~~~~~~~~~~~~~~~~~~~vGvNC~---~p~~~---~~~l~~l~~~~~~~p~~~~p 261 (581)
.+. ++||++ .+|...+-+.+..+++.+.+ ......+..-|+ +.... ...+..|++ ...|++..|
T Consensus 152 a~~-gkPVil-----K~Gms~t~~ei~~ave~i~~--~Gn~~iiL~erg~~y~~~~~~vdl~~i~~lk~--~~~PV~~D~ 221 (298)
T 3fs2_A 152 ART-GRVVNV-----KKGQFLAPWDMKNVLAKITE--SGNPNVLATERGVSFGYNTLVSDMRALPIMAG--LGAPVIFDA 221 (298)
T ss_dssp HHT-TSEEEE-----ECCTTCCGGGHHHHHHHHHT--TTCCCEEEEECCEECSSSCEECCTTHHHHHHT--TTSCEEEEH
T ss_pred Hcc-CCcEEE-----eCCCCCCHHHHHHHHHHHHH--cCCCeEEEEECCCCCCCCCCccCHHHHHHHHH--cCCcEEEcC
Done!