Your job contains 1 sequence.
>psy15811
MSKICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQ
SSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIET
AASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPAEKEA
LALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSH
VSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPE
ACVETHRDFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA
GVDYLALIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRA
GVDYLALETIPAEKEALALVKLLREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLAN
PDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL
HYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEFNTKKND
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15811
(581 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0032727 - symbol:CG10623 species:7227 "Drosophila ... 468 1.9e-44 1
FB|FBgn0032726 - symbol:CG10621 species:7227 "Drosophila ... 446 4.0e-42 1
ZFIN|ZDB-GENE-030131-9545 - symbol:zgc:172121 "zgc:172121... 418 3.7e-39 1
UNIPROTKB|Q47690 - symbol:mmuM species:83333 "Escherichia... 379 6.6e-35 1
TAIR|locus:2094419 - symbol:HMT3 "homocysteine S-methyltr... 367 1.7e-33 1
TAIR|locus:2077234 - symbol:HMT2 "homocysteine methyltran... 363 4.8e-33 1
TAIR|locus:2092120 - symbol:HMT-1 species:3702 "Arabidops... 360 1.1e-32 1
UNIPROTKB|A4ZGQ8 - symbol:HMT1 "Homocysteine S-methyltran... 352 8.7e-32 1
UNIPROTKB|Q4VNK0 - symbol:SMT "Selenocysteine Se-methyltr... 344 7.0e-31 1
CGD|CAL0004923 - symbol:SAM4 species:5476 "Candida albica... 268 1.7e-22 1
WB|WBGene00020491 - symbol:T13G4.4 species:6239 "Caenorha... 249 2.0e-20 1
ASPGD|ASPL0000037651 - symbol:AN3378 species:162425 "Emer... 161 6.7e-11 2
SGD|S000006194 - symbol:SAM4 "S-adenosylmethionine-homocy... 170 6.6e-10 1
SGD|S000003985 - symbol:MHT1 "S-methylmethionine-homocyst... 169 8.4e-10 1
POMBASE|SPAC57A7.07c - symbol:SPAC57A7.07c "homocysteine ... 166 1.5e-09 1
SGD|S000004940 - symbol:YMR321C "Putative protein of unkn... 148 1.6e-09 1
TIGR_CMR|SPO_3398 - symbol:SPO_3398 "homocysteine S-methy... 88 0.00010 2
UNIPROTKB|F1NGK3 - symbol:MTR "Uncharacterized protein" s... 130 0.00011 1
UNIPROTKB|E2R716 - symbol:MTR "Uncharacterized protein" s... 139 0.00014 2
UNIPROTKB|F1NLY0 - symbol:MTR "Uncharacterized protein" s... 130 0.00015 1
DICTYBASE|DDB_G0284699 - symbol:mtr "cobalamin-dependent ... 128 0.00025 1
TIGR_CMR|BA_4478 - symbol:BA_4478 "5-methyltetrahydrofola... 89 0.00045 2
UNIPROTKB|F1RHM1 - symbol:MTR "Uncharacterized protein" s... 136 0.00047 2
UNIPROTKB|Q4JIJ3 - symbol:MTR "Methionine synthase" speci... 135 0.00061 2
UNIPROTKB|O33259 - symbol:metH "Methionine synthase" spec... 87 0.00065 2
UNIPROTKB|P13009 - symbol:metH species:83333 "Escherichia... 126 0.00099 2
>FB|FBgn0032727 [details] [associations]
symbol:CG10623 species:7227 "Drosophila melanogaster"
[GO:0016205 "selenocysteine methyltransferase activity"
evidence=ISS] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA] InterPro:IPR003726 Pfam:PF02574
PROSITE:PS50970 EMBL:AE014134 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 HSSP:Q93088 OMA:YQSSVEG
GeneTree:ENSGT00510000049619 OrthoDB:EOG45MKN1 EMBL:AY118872
EMBL:AM294641 EMBL:AM294643 EMBL:AM294645 EMBL:AM294646
EMBL:FM245789 EMBL:FM245791 RefSeq:NP_609921.1 UniGene:Dm.13519
MINT:MINT-923852 EnsemblMetazoa:FBtr0081190 GeneID:35153
KEGG:dme:Dmel_CG10623 UCSC:CG10623-RA FlyBase:FBgn0032727
InParanoid:Q9VJ31 GenomeRNAi:35153 NextBio:792127 Uniprot:Q9VJ31
Length = 331
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 108/330 (32%), Positives = 173/330 (52%)
Query: 260 YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAAS 319
+ K + + G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R + +
Sbjct: 9 WDTKPILVKCGGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILT 68
Query: 320 IGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTA-- 377
Y + + +Y G V +LI + +V+ +A YL+ I S
Sbjct: 69 -NTYQSSVEGFVKYLG--VTRERGVELI---QKSVQLAKQAKEQYLSEIGSEAESALPLI 122
Query: 378 -ASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPXXXXX 436
SIGPYG L DGSEY+G+Y D M++ +L AWH+ +E + AGVD LALET+P
Sbjct: 123 MGSIGPYGAYLHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEA 182
Query: 437 XXXXXXXRE-FPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLAN---PDQIQAIGVN 490
+ FP K W+S C D+ H + GE + A S L+ + +++ IG+N
Sbjct: 183 EAVTELVLDNFPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLN 242
Query: 491 CVRPSHVSTLVRCIKQ--SHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLE 548
CV P V+ L+ + + + +VY N+G ++D W T +E ++ +VP+W++
Sbjct: 243 CVNPLFVTPLLSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDWTGTGEE--VVKFVPEWIQ 300
Query: 549 EGVNIIGGCCEVTSYEIQQMRIMIDEFNTK 578
GV I+GGCC V ++ +R +D N K
Sbjct: 301 LGVRIVGGCCRVYPTDVLAIRKYVDGLNIK 330
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 97/262 (37%), Positives = 147/262 (56%)
Query: 12 GSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANVDNL 71
G F+SQ++++ + VDG PLW S + T PEA ++TH DF+R GADII ++ YQ++V+
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 72 TK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYGTV 130
K LG + + ++L+ KSVQL AK++ L+ G SIGPYG
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQAKEQYLSEIGSEAESALPLIMG------SIGPYGAY 132
Query: 131 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPXXXXXXXXXXXXRE- 189
L DGSEY+G+Y D M++ +L AWH+ +E + AGVD LALET+P +
Sbjct: 133 LHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDN 192
Query: 190 FPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLAN---PDQIQAIGVNCVRPSHVSTL 244
FP K W+S C D+ H + GE + A S L+ + +++ IG+NCV P V+ L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 245 VRCIKQ--SHPTVQTIVYPNKG 264
+ + + + +VY N+G
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRG 274
>FB|FBgn0032726 [details] [associations]
symbol:CG10621 species:7227 "Drosophila melanogaster"
[GO:0016205 "selenocysteine methyltransferase activity"
evidence=ISS] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA] InterPro:IPR003726 Pfam:PF02574
PROSITE:PS50970 EMBL:AE014134 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 KO:K00547 OMA:ACETIPC GeneTree:ENSGT00510000049619
FlyBase:FBgn0032726 ChiTaRS:CG10621 EMBL:BT030804
RefSeq:NP_609920.1 UniGene:Dm.10781 SMR:Q9VJ32 IntAct:Q9VJ32
MINT:MINT-853631 EnsemblMetazoa:FBtr0081191 GeneID:35152
KEGG:dme:Dmel_CG10621 UCSC:CG10621-RA InParanoid:Q9VJ32
GenomeRNAi:35152 NextBio:792122 Uniprot:Q9VJ32
Length = 331
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 111/327 (33%), Positives = 174/327 (53%)
Query: 4 ICKVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+ +V + DG F +Q++ H VDG PLWS+ + T P A + TH DF++ GADII ++
Sbjct: 3 LTRVLVKDGGFGTQMTVHVGDSVDGDPLWSARFNATNPAAIISTHLDFLQNGADIILTNT 62
Query: 64 YQANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDK---ENQTPDINLNKTFNLLTGHIE 119
YQ++VD + L E+++++L+ +V+L + AK++ E +++ + + L+
Sbjct: 63 YQSSVDGYMEYLELDEEQSIELIKNTVRLAHIAKERYLTECYQAQLSVQEGYPLII---- 118
Query: 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPXXXX 179
ASIGP+G L DGSEY+G Y D + ++ WHR +EA + AGVD LA+ETIP
Sbjct: 119 --ASIGPFGAHLHDGSEYTGSYADFVPAKEITDWHRVRIEACLEAGVDALAIETIPCQME 176
Query: 180 XXXXXXXX-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLAN---PDQIQAIGV 233
++P K W++F CKD+ +HGE + A + LLA D+ AIGV
Sbjct: 177 AEALVEMLCDDYPDVKFWVAFQCKDENTLAHGETFADAANAIWDLLAERNAQDKCLAIGV 236
Query: 234 NCVRPSHVSTLVRCI---KQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLW 290
NCV P V+ L + + ++ + +VYPN G ++ D Q H + + P W
Sbjct: 237 NCVHPKFVTPLFKSLNGDREVGEQIPLVVYPNSG-EVYDVVNGWQGREHCVPLANYVPEW 295
Query: 291 SSVYLTTEPEACVETHRDFIRGHIETA 317
+ + C RD IR HI A
Sbjct: 296 AQLGAKVIGGCCRTYARD-IR-HIGEA 320
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 112/330 (33%), Positives = 168/330 (50%)
Query: 265 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYG 324
V + DG F +Q++ H VDG PLWS+ + T P A + TH DF++ + + Y
Sbjct: 6 VLVKDGGFGTQMTVHVGDSVDGDPLWSARFNATNPAAIISTHLDFLQNGADIILT-NTYQ 64
Query: 325 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA-LIKPSISSQTA-----A 378
+ + DG Y Y++ + E I + V A YL + +S Q A
Sbjct: 65 SSV-DG--YM-EYLE-LDEEQSIELIKNTVRLAHIAKERYLTECYQAQLSVQEGYPLIIA 119
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPXXXXXXX 438
SIGP+G L DGSEY+G Y D + ++ WHR +EA + AGVD LA+ETIP
Sbjct: 120 SIGPFGAHLHDGSEYTGSYADFVPAKEITDWHRVRIEACLEAGVDALAIETIPCQMEAEA 179
Query: 439 XXXXX-REFPGQKAWLSFSCKDDTHTSHGELISSAVTSC--LLAN---PDQIQAIGVNCV 492
++P K W++F CKD+ +HGE + A + LLA D+ AIGVNCV
Sbjct: 180 LVEMLCDDYPDVKFWVAFQCKDENTLAHGETFADAANAIWDLLAERNAQDKCLAIGVNCV 239
Query: 493 RPSHVSTLVRCI---KQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEE 549
P V+ L + + ++ + +VYPN G V+D V+ W E + +YVP+W +
Sbjct: 240 HPKFVTPLFKSLNGDREVGEQIPLVVYPNSGEVYDVVN-GWQGREHCVPLANYVPEWAQL 298
Query: 550 GVNIIGGCCEVTSYEIQQMRIMIDEFNTKK 579
G +IGGCC + +I+ + I ++N K
Sbjct: 299 GAKVIGGCCRTYARDIRHIGEAIRDWNKLK 328
>ZFIN|ZDB-GENE-030131-9545 [details] [associations]
symbol:zgc:172121 "zgc:172121" species:7955 "Danio
rerio" [GO:0008898 "homocysteine S-methyltransferase activity"
evidence=IEA] InterPro:IPR003726 Pfam:PF02574 PROSITE:PS50970
ZFIN:ZDB-GENE-030131-9545 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GeneTree:ENSGT00510000049619 EMBL:AL928701
IPI:IPI00934771 Ensembl:ENSDART00000043496 Bgee:F1RAY3
Uniprot:F1RAY3
Length = 311
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 94/260 (36%), Positives = 141/260 (54%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG +++ + + G PLWS+ L T+ +A + H ++++G+D+I ++ YQA++
Sbjct: 11 ILDGGLATELEASGFQ-LQGDPLWSARVLHTDSQAIKDVHYRYLQSGSDVITTATYQASI 69
Query: 69 DNLTK-LGYSEQEALDLLHKSVQLMN-SAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
+ K LG +EA ++ +VQL + + +Q+P + + A S+GP
Sbjct: 70 EGFVKYLGVQPEEAQHMMMSAVQLAKETVSEFISQSPMSDRREPL--------VAGSVGP 121
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPXXXXXXXXXXX 186
YG+ L DGSEY+G Y D MT +L WHRP ++ LV+AG D +A+ETIP
Sbjct: 122 YGSFLHDGSEYTGAYEDKMTVEELKDWHRPQIQCLVKAGADLVAMETIPGLKEAEALVEV 181
Query: 187 XREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+EFP KAWLSFSCKD+ S G S AV + Q+ A+GVNC V L+
Sbjct: 182 LKEFPETKAWLSFSCKDNNSISSGRRFSEAVE--MACRSTQLVAVGVNCCPALLVKPLLE 239
Query: 247 CIKQSHPTVQT--IVYPNKG 264
K SH +VYPN G
Sbjct: 240 SAK-SHKRADLSWVVYPNSG 258
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 100/307 (32%), Positives = 148/307 (48%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG +++ + + G PLWS+ L T+ +A + H +++ + + Y
Sbjct: 11 ILDGGLATELEASGFQ-LQGDPLWSARVLHTDSQAIKDVHYRYLQSGSDVITT-ATYQAS 68
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ--TAASIGPYG 384
+ +Y G + + A V+ ++++ S + A S+GPYG
Sbjct: 69 IEGFVKYLGVQPEEAQHMMMSA-----VQLAKETVSEFISQSPMSDRREPLVAGSVGPYG 123
Query: 385 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPXXXXXXXXXXXXR 444
+ L DGSEY+G Y D MT +L WHRP ++ LV+AG D +A+ETIP +
Sbjct: 124 SFLHDGSEYTGAYEDKMTVEELKDWHRPQIQCLVKAGADLVAMETIPGLKEAEALVEVLK 183
Query: 445 EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCI 504
EFP KAWLSFSCKD+ S G S AV + Q+ A+GVNC V L+
Sbjct: 184 EFPETKAWLSFSCKDNNSISSGRRFSEAVE--MACRSTQLVAVGVNCCPALLVKPLLESA 241
Query: 505 KQSHPTVQT--IVYPNKGGVWDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEVTS 562
K SH +VYPN G WD V W TE S + +W +G IGGCC V
Sbjct: 242 K-SHKRADLSWVVYPNSGEGWD-VTTGW-KTEMRTSFANLSLEWKAQGALWIGGCCRVRP 298
Query: 563 YEIQQMR 569
+I +++
Sbjct: 299 ADITELK 305
>UNIPROTKB|Q47690 [details] [associations]
symbol:mmuM species:83333 "Escherichia coli K-12"
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0032259 "methylation" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0008652 "cellular amino acid biosynthetic
process" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA] [GO:0009086 "methionine biosynthetic
process" evidence=IEA] InterPro:IPR003726 Pfam:PF02574
PROSITE:PS50970 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0006974 EMBL:U70214
GO:GO:0009086 GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282
eggNOG:COG2040 HOGENOM:HOG000265278 KO:K00547 OMA:ACETIPC
PIR:E64751 RefSeq:NP_414795.1 RefSeq:YP_488556.1
ProteinModelPortal:Q47690 SMR:Q47690 IntAct:Q47690
EnsemblBacteria:EBESCT00000001025 EnsemblBacteria:EBESCT00000018250
GeneID:12930783 GeneID:946143 KEGG:ecj:Y75_p0252 KEGG:eco:b0261
PATRIC:32115641 EcoGene:EG13343 ProtClustDB:PRK09485
BioCyc:EcoCyc:MMUM-MONOMER BioCyc:ECOL316407:JW0253-MONOMER
BioCyc:MetaCyc:MMUM-MONOMER Genevestigator:Q47690 Uniprot:Q47690
Length = 310
Score = 379 (138.5 bits), Expect = 6.6e-35, P = 6.6e-35
Identities = 101/323 (31%), Positives = 154/323 (47%)
Query: 248 IKQSHPTVQTIVYPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHR 307
+ Q++P ++ ++ + + LLDG+ +++ D LWS+ L PE E H
Sbjct: 1 MSQNNP-LRALL-DKQDILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHL 56
Query: 308 DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 367
D+ R + A + T +G + EA A +VE +A YLA
Sbjct: 57 DYYRAGAQCAITASYQATP-------AGFAARGLDEAQSKALIGKSVELARKAREAYLAE 109
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
+ + A S+GPYG L DGSEY G Y S+ EA A+HRP VEAL+ AG D LA
Sbjct: 110 NPQAGTLLVAGSVGPYGAYLADGSEYRGDYHCSV-EA-FQAFHRPRVEALLDAGADLLAC 167
Query: 428 ETIPXXXXXXXXXXXXREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI 487
ET+P +P +AW SF+ +D H S G + V LLA Q+ A+
Sbjct: 168 ETLPNFSEIEALAELLTAYPRARAWFSFTLRDSEHLSDGTPLRDVVA--LLAGYPQVVAL 225
Query: 488 GVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSIL-HYVPQW 546
G+NC+ + + ++ + + +VYPN G +D+V W + + L Y+PQW
Sbjct: 226 GINCIALENTTAALQHL-HGLTVLPLVVYPNSGEHYDAVSKTWHHHGEHCAQLADYLPQW 284
Query: 547 LEEGVNIIGGCCEVTSYEIQQMR 569
G +IGGCC T +I ++
Sbjct: 285 QAAGARLIGGCCRTTPADIAALK 307
Score = 340 (124.7 bits), Expect = 2.0e-30, P = 2.0e-30
Identities = 88/258 (34%), Positives = 126/258 (48%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDG+ +++ D LWS+ L PE E H D+ RAGA ++ YQA
Sbjct: 16 ILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQA 73
Query: 67 NVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGP 126
G E ++ L+ KSV+L A++ L + N G + A S+GP
Sbjct: 74 TPAGFAARGLDEAQSKALIGKSVELARKAREAY-------LAE--NPQAGTLLVAGSVGP 124
Query: 127 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPXXXXXXXXXXX 186
YG L DGSEY G Y S+ EA A+HRP VEAL+ AG D LA ET+P
Sbjct: 125 YGAYLADGSEYRGDYHCSV-EA-FQAFHRPRVEALLDAGADLLACETLPNFSEIEALAEL 182
Query: 187 XREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVR 246
+P +AW SF+ +D H S G + V LLA Q+ A+G+NC+ + + ++
Sbjct: 183 LTAYPRARAWFSFTLRDSEHLSDGTPLRDVVA--LLAGYPQVVALGINCIALENTTAALQ 240
Query: 247 CIKQSHPTVQTIVYPNKG 264
+ + +VYPN G
Sbjct: 241 HL-HGLTVLPLVVYPNSG 257
>TAIR|locus:2094419 [details] [associations]
symbol:HMT3 "homocysteine S-methyltransferase 3"
species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR003726 Pfam:PF02574 PROSITE:PS50970
GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0009086 GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282
EMBL:AB022223 eggNOG:COG2040 HOGENOM:HOG000265278 KO:K00547
ProtClustDB:PLN02489 EMBL:AF297394 EMBL:AK118021 EMBL:BT005318
EMBL:AY087554 IPI:IPI00516296 RefSeq:NP_566715.1 UniGene:At.6305
ProteinModelPortal:Q8LAX0 SMR:Q8LAX0 STRING:Q8LAX0 PaxDb:Q8LAX0
PRIDE:Q8LAX0 EnsemblPlants:AT3G22740.1 GeneID:821845
KEGG:ath:AT3G22740 TAIR:At3g22740 InParanoid:Q8LAX0 OMA:ACETIPC
PhylomeDB:Q8LAX0 Genevestigator:Q8LAX0 GermOnline:AT3G22740
Uniprot:Q8LAX0
Length = 347
Score = 367 (134.2 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 101/326 (30%), Positives = 157/326 (48%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGH---IETA--- 317
G ++DG F +++ RH D++ PLWS+ L T P + H D++ I TA
Sbjct: 22 GYAVVDGGFATELQRHGA-DIND-PLWSAKCLITSPHLVTKVHLDYLESGANIIITASYQ 79
Query: 318 ASIGPY---GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISS 374
A+I + G + + V+ EA I ++R + D+ K S
Sbjct: 80 ATIQGFVAKGLSVGEAENLLRRSVEITYEAREIFYNR-----CTKGSWDFAYAGKASRRP 134
Query: 375 -QTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPXX 433
AAS+G YG L DGSEYSG Y DS+++ L +HR V+ L ++G D +A ETIP
Sbjct: 135 ILVAASVGSYGAYLADGSEYSGIYGDSVSKETLKDFHRRRVQILAKSGADLIAFETIPNK 194
Query: 434 XXXXXXXXXXREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIGVNC 491
E AW SF+ KD G+ S V +A+ + AIG+NC
Sbjct: 195 LEAEAYADLLEEEDIDIPAWFSFTSKDGVSVPRGD---SVVECAKVADSCKNVVAIGINC 251
Query: 492 VRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE--DEYSILHYVPQWLEE 549
P ++ L+ ++Q +VYPN G V+D ++ KW+ +E E + YV +W +
Sbjct: 252 TAPRYIHALIISLRQM-TRKPIVVYPNSGEVYDGLNKKWIKSEGESEEDFVSYVSKWRDA 310
Query: 550 GVNIIGGCCEVTSYEIQQM-RIMIDE 574
G ++ GGCC T I+ + +++ DE
Sbjct: 311 GASLFGGCCRTTPNTIRAIAKVLSDE 336
Score = 346 (126.9 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 88/267 (32%), Positives = 137/267 (51%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG F +++ RH D++ PLWS+ L T P + H D++ +GA+II ++ YQA +
Sbjct: 25 VVDGGFATELQRHGA-DIND-PLWSAKCLITSPHLVTKVHLDYLESGANIIITASYQATI 82
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDK-ENQTPDINLNKTFNLLTGH--IETAASIG 125
G S EA +LL +SV++ A++ N+ + + + I AAS+G
Sbjct: 83 QGFVAKGLSVGEAENLLRRSVEITYEAREIFYNRCTKGSWDFAYAGKASRRPILVAASVG 142
Query: 126 PYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPXXXXXXXXXX 185
YG L DGSEYSG Y DS+++ L +HR V+ L ++G D +A ETIP
Sbjct: 143 SYGAYLADGSEYSGIYGDSVSKETLKDFHRRRVQILAKSGADLIAFETIPNKLEAEAYAD 202
Query: 186 XXREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANP-DQIQAIGVNCVRPSHVST 243
E AW SF+ KD G+ S V +A+ + AIG+NC P ++
Sbjct: 203 LLEEEDIDIPAWFSFTSKDGVSVPRGD---SVVECAKVADSCKNVVAIGINCTAPRYIHA 259
Query: 244 LVRCIKQSHPTVQTIVYPNKGVKLLDG 270
L+ ++Q +VYPN G ++ DG
Sbjct: 260 LIISLRQM-TRKPIVVYPNSG-EVYDG 284
>TAIR|locus:2077234 [details] [associations]
symbol:HMT2 "homocysteine methyltransferase 2"
species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA;ISS;IDA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA;IDA] [GO:0033528
"S-methylmethionine cycle" evidence=IMP] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006260 "DNA replication" evidence=RCA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0009616 "virus induced gene
silencing" evidence=RCA] [GO:0010050 "vegetative phase change"
evidence=RCA] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] InterPro:IPR003726 Pfam:PF02574
PROSITE:PS50970 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0009086 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 EMBL:AL138648 eggNOG:COG2040 HOGENOM:HOG000265278
KO:K00547 ProtClustDB:PLN02489 EMBL:AF219223 EMBL:AF428402
EMBL:BT010165 IPI:IPI00534315 PIR:T48114 PIR:T51939
RefSeq:NP_191884.1 UniGene:At.21554 ProteinModelPortal:Q9M1W4
SMR:Q9M1W4 STRING:Q9M1W4 PaxDb:Q9M1W4 PRIDE:Q9M1W4 DNASU:825500
EnsemblPlants:AT3G63250.1 GeneID:825500 KEGG:ath:AT3G63250
TAIR:At3g63250 InParanoid:Q9M1W4 OMA:YQSSVEG PhylomeDB:Q9M1W4
Genevestigator:Q9M1W4 GO:GO:0033528 Uniprot:Q9M1W4
Length = 333
Score = 363 (132.8 bits), Expect = 4.8e-33, P = 4.8e-33
Identities = 88/261 (33%), Positives = 132/261 (50%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG ++ RH D++ PLWS+ L T P H D++ AGADII S+ YQA +
Sbjct: 21 VIDGGLATEFERHGA-DLND-PLWSAKCLVTSPHLIHTVHLDYLEAGADIISSASYQATI 78
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH-IETAASIGPY 127
G+S +E+ LL KSV++ A++ + + +L I AAS+G Y
Sbjct: 79 QGFEAKGFSREESESLLKKSVEIATEARNSYYDKCGTSSSMDDKILKKRPILVAASVGSY 138
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPXXXXXXXXXXXX 187
G L DGSEYSG Y DS+T L +HR ++ L +G D +A ETIP
Sbjct: 139 GAYLADGSEYSGIYGDSITLEKLKDFHRRRLQVLAESGADLIAFETIPNKIEAQAFADLL 198
Query: 188 RE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
E PG W SF+ KD + G+ I ++ + N +++ A+G+NC P +
Sbjct: 199 EEGDVKIPG---WFSFNSKDGVNVVSGDSIKECIS--IAENCEKVVAVGINCTPPRFIEG 253
Query: 244 LVRCIKQSHPTVQTIVYPNKG 264
LV I++ + +VYPN G
Sbjct: 254 LVLEIEKV-TSKPILVYPNSG 273
Score = 350 (128.3 bits), Expect = 1.5e-31, P = 1.5e-31
Identities = 94/315 (29%), Positives = 151/315 (47%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G ++DG ++ RH D++ PLWS+ L T P H D++ + +S
Sbjct: 18 GYAVIDGGLATEFERHGA-DLND-PLWSAKCLVTSPHLIHTVHLDYLEAGADIISSASYQ 75
Query: 324 GTVLR-DGSEYSGHYVDSMTEADL-IAWHRPNV---EALVRAGVDYLALIKPSISSQTAA 378
T+ + +S +S+ + + IA N + + +D L K I AA
Sbjct: 76 ATIQGFEAKGFSREESESLLKKSVEIATEARNSYYDKCGTSSSMDDKILKKRPIL--VAA 133
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPXXXXXXX 438
S+G YG L DGSEYSG Y DS+T L +HR ++ L +G D +A ETIP
Sbjct: 134 SVGSYGAYLADGSEYSGIYGDSITLEKLKDFHRRRLQVLAESGADLIAFETIPNKIEAQA 193
Query: 439 XXXXXRE----FPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
E PG W SF+ KD + G+ I ++ + N +++ A+G+NC P
Sbjct: 194 FADLLEEGDVKIPG---WFSFNSKDGVNVVSGDSIKECIS--IAENCEKVVAVGINCTPP 248
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE---DEYSILHYVPQWLEEGV 551
+ LV I++ + +VYPN G +D+ +W++ DE + YV +W++ GV
Sbjct: 249 RFIEGLVLEIEKV-TSKPILVYPNSGESYDADRKEWVENTGVGDE-DFVSYVEKWMDAGV 306
Query: 552 NIIGGCCEVTSYEIQ 566
+++GGCC T I+
Sbjct: 307 SLLGGCCRTTPTTIR 321
>TAIR|locus:2092120 [details] [associations]
symbol:HMT-1 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008898 "homocysteine
S-methyltransferase activity" evidence=IEA;ISS;IDA] [GO:0009086
"methionine biosynthetic process" evidence=IDA] InterPro:IPR003726
Pfam:PF02574 PROSITE:PS50970 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AB023041 GO:GO:0046872 GO:GO:0009086
GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282 EMBL:AF219222
EMBL:AY065163 EMBL:AY081604 IPI:IPI00527423 PIR:T51941
RefSeq:NP_189219.1 UniGene:At.23868 ProteinModelPortal:Q9SDL7
SMR:Q9SDL7 IntAct:Q9SDL7 STRING:Q9SDL7 PRIDE:Q9SDL7
EnsemblPlants:AT3G25900.1 GeneID:822186 KEGG:ath:AT3G25900
TAIR:At3g25900 eggNOG:COG2040 HOGENOM:HOG000265278
InParanoid:Q9SDL7 KO:K00547 OMA:EGYMEYL PhylomeDB:Q9SDL7
ProtClustDB:PLN02489 Genevestigator:Q9SDL7 Uniprot:Q9SDL7
Length = 326
Score = 360 (131.8 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 94/264 (35%), Positives = 132/264 (50%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG F +Q+ H D PLWS+V L PE H +++ AGADI+ +S YQA +
Sbjct: 22 VVDGGFATQLEIHGAAIND--PLWSAVSLIKNPELIKRVHMEYLEAGADIVVTSSYQATI 79
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G S +E+ LL KSV+L A+D+ + ++N AASIG YG
Sbjct: 80 PGFLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVSGHSYNRAL----VAASIGSYG 135
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPXXXXXXXXXXXXR 188
L DGSEYSGHY ++++ L +HR ++ LV AG D LA ETIP
Sbjct: 136 AYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLE 195
Query: 189 EFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
E Q AW+ F+ D GE + L + I A+G+NC P + L+R
Sbjct: 196 EEKVQIPAWICFTSVDGEKAPSGESFEECLEP--LNKSNNIYAVGINCAPPQFIENLIR- 252
Query: 248 IKQSHPTVQTIV-YPNKGVKLLDG 270
K + T + IV YPN G ++ DG
Sbjct: 253 -KFAKLTKKAIVVYPNSG-EVWDG 274
Score = 342 (125.4 bits), Expect = 1.2e-30, P = 1.2e-30
Identities = 99/309 (32%), Positives = 144/309 (46%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G ++DG F +Q+ H D PLWS+V L PE H +++ + +
Sbjct: 19 GCAVVDGGFATQLEIHGAAIND--PLWSAVSLIKNPELIKRVHMEYLEAGADIVVTSSYQ 76
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALI-KPSISSQT----AA 378
T+ G G S+ E++ + + +VE V A + + K S S AA
Sbjct: 77 ATI--PGFLSRGL---SIEESESLL--QKSVELAVEARDRFWEKVSKVSGHSYNRALVAA 129
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPXXXXXXX 438
SIG YG L DGSEYSGHY ++++ L +HR ++ LV AG D LA ETIP
Sbjct: 130 SIGSYGAYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQA 189
Query: 439 XXXXXREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
E Q AW+ F+ D GE + L + I A+G+NC P +
Sbjct: 190 CVELLEEEKVQIPAWICFTSVDGEKAPSGESFEECLEP--LNKSNNIYAVGINCAPPQFI 247
Query: 498 STLVRCIKQSHPTVQTIV-YPNKGGVWDSVHMKWLDTE----DEYSILHYVPQWLEEGVN 552
L+R K + T + IV YPN G VWD +WL ++ DE+ + + +W + G
Sbjct: 248 ENLIR--KFAKLTKKAIVVYPNSGEVWDGKAKQWLPSQCFGDDEFEM--FATKWRDLGAK 303
Query: 553 IIGGCCEVT 561
+IGGCC T
Sbjct: 304 LIGGCCRTT 312
>UNIPROTKB|A4ZGQ8 [details] [associations]
symbol:HMT1 "Homocysteine S-methyltransferase 1"
species:36774 "Brassica oleracea var. italica" [GO:0008898
"homocysteine S-methyltransferase activity" evidence=IDA]
[GO:0032259 "methylation" evidence=IDA] InterPro:IPR003726
Pfam:PF02574 PROSITE:PS50970 GO:GO:0046872 GO:GO:0008898
Gene3D:3.20.20.330 SUPFAM:SSF82282 EMBL:DQ679980
BioCyc:MetaCyc:MONOMER-15250 BRENDA:2.1.1.10 Uniprot:A4ZGQ8
Length = 326
Score = 352 (129.0 bits), Expect = 8.7e-32, P = 8.7e-32
Identities = 93/264 (35%), Positives = 132/264 (50%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG F +Q+ H D PLWS+V L +PE H +++ AGAD++ +S YQA +
Sbjct: 22 VVDGGFATQLEIHGAAIND--PLWSAVSLIKDPELIKRVHMEYLEAGADVVVTSSYQATI 79
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPYG 128
G S +E+ LL KSV+L A+D+ ++KT AASIG YG
Sbjct: 80 PGFLSRGLSMEESESLLQKSVKLAVEARDRFWD----KVSKTSGHSYNRALVAASIGSYG 135
Query: 129 TVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPXXXXXXXXXXXXR 188
L DGSEYSG Y + ++ L +HR ++ LV A D LA ETIP
Sbjct: 136 AYLADGSEYSGSYGEDVSLDKLKDFHRRRIQVLVEASPDLLAFETIPNKLEAQACVELLE 195
Query: 189 EFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVSTLVRC 247
E Q AW+ F+ D + GE + + L + I A+G+NC P + L+R
Sbjct: 196 EENVQIPAWICFTSVDGENAPSGESFQECLET--LNKSNNICAVGINCAPPQFMDNLIR- 252
Query: 248 IKQSHPTVQTIV-YPNKGVKLLDG 270
K S T + IV YPN G ++ DG
Sbjct: 253 -KFSKLTQKAIVVYPNSG-EVWDG 274
Score = 332 (121.9 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 98/312 (31%), Positives = 143/312 (45%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G ++DG F +Q+ H D PLWS+V L +PE H +++ + +
Sbjct: 19 GCAVVDGGFATQLEIHGAAIND--PLWSAVSLIKDPELIKRVHMEYLEAGADVVVTSSYQ 76
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALI-KPSISSQT----AA 378
T+ G G SM E++ + + +V+ V A + + K S S AA
Sbjct: 77 ATI--PGFLSRGL---SMEESESLL--QKSVKLAVEARDRFWDKVSKTSGHSYNRALVAA 129
Query: 379 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPXXXXXXX 438
SIG YG L DGSEYSG Y + ++ L +HR ++ LV A D LA ETIP
Sbjct: 130 SIGSYGAYLADGSEYSGSYGEDVSLDKLKDFHRRRIQVLVEASPDLLAFETIPNKLEAQA 189
Query: 439 XXXXXREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
E Q AW+ F+ D + GE + + L + I A+G+NC P +
Sbjct: 190 CVELLEEENVQIPAWICFTSVDGENAPSGESFQECLET--LNKSNNICAVGINCAPPQFM 247
Query: 498 STLVRCIKQSHPTVQTIV-YPNKGGVWDSVHMKWLDTE--DEYSILHYVPQWLEEGVNII 554
L+R K S T + IV YPN G VWD KWL ++ + + +W + G +I
Sbjct: 248 DNLIR--KFSKLTQKAIVVYPNSGEVWDGKAKKWLPSQCFGDAEFEMFATKWRDLGAKLI 305
Query: 555 GGCCEVTSYEIQ 566
GGCC T I+
Sbjct: 306 GGCCRTTPSTIK 317
>UNIPROTKB|Q4VNK0 [details] [associations]
symbol:SMT "Selenocysteine Se-methyltransferase"
species:36774 "Brassica oleracea var. italica" [GO:0010269
"response to selenium ion" evidence=IDA] [GO:0016205
"selenocysteine methyltransferase activity" evidence=IDA]
[GO:0032259 "methylation" evidence=IDA] InterPro:IPR003726
Pfam:PF02574 PROSITE:PS50970 GO:GO:0046872 GO:GO:0010269
GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282 EMBL:AY817737
BioCyc:MetaCyc:MONOMER-15249 GO:GO:0016205 Uniprot:Q4VNK0
Length = 346
Score = 344 (126.2 bits), Expect = 7.0e-31, P = 7.0e-31
Identities = 88/261 (33%), Positives = 129/261 (49%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
++DG +++ RH D++ PLWS+ L T P H D++ AGADII S+ YQA +
Sbjct: 26 IIDGGLATELERHGA-DLND-PLWSAKCLLTSPHLIHTVHLDYLEAGADIISSASYQATI 83
Query: 69 DNLTKLGYSEQEALDLLHKSVQLMNSAK----DKENQTPDINLNKTFNLLTGHIETAASI 124
GYS +++ LL KSV++ A+ DK D + K +L AAS+
Sbjct: 84 QGFEAKGYSIEKSESLLRKSVEIACEARSTYYDKCKDDDDKKILKKRPILV-----AASV 138
Query: 125 GPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPXXXXXXXXX 184
G YG L DGSEYSG Y D +T L +HR V+ L +G D +A ETIP
Sbjct: 139 GSYGAFLADGSEYSGIYGDLITLETLKDFHRRRVQVLAESGADIIAFETIPNKLEAQAFA 198
Query: 185 XXXREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 243
E + W SF+ KD + G+ I + + +++ A+G+NC P +
Sbjct: 199 ELLDEGVAKIPGWFSFNSKDGVNVVSGDSIKECIA--IAEACEKVVAVGINCTPPRFIEG 256
Query: 244 LVRCIKQSHPTVQTIVYPNKG 264
LV I + + +VYPN G
Sbjct: 257 LVLEIAKV-TSKPILVYPNSG 276
Score = 339 (124.4 bits), Expect = 2.6e-30, P = 2.6e-30
Identities = 91/314 (28%), Positives = 144/314 (45%)
Query: 264 GVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPY 323
G ++DG +++ RH D++ PLWS+ L T P H D++ + +S
Sbjct: 23 GYAIIDGGLATELERHGA-DLND-PLWSAKCLLTSPHLIHTVHLDYLEAGADIISSASYQ 80
Query: 324 GTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQ-------- 375
T+ G E G+ ++ +E+ L R +VE A Y K +
Sbjct: 81 ATI--QGFEAKGYSIEK-SESLL----RKSVEIACEARSTYYDKCKDDDDKKILKKRPIL 133
Query: 376 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPXXXX 435
AAS+G YG L DGSEYSG Y D +T L +HR V+ L +G D +A ETIP
Sbjct: 134 VAASVGSYGAFLADGSEYSGIYGDLITLETLKDFHRRRVQVLAESGADIIAFETIPNKLE 193
Query: 436 XXXXXXXXREFPGQ-KAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 494
E + W SF+ KD + G+ I + + +++ A+G+NC P
Sbjct: 194 AQAFAELLDEGVAKIPGWFSFNSKDGVNVVSGDSIKECIA--IAEACEKVVAVGINCTPP 251
Query: 495 SHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTED--EYSILHYVPQWLEEGVN 552
+ LV I + + +VYPN G +D +W++ + YV +W++ GV+
Sbjct: 252 RFIEGLVLEIAKV-TSKPILVYPNSGERYDPERKEWVENTGVGNEDFVSYVEKWMDAGVS 310
Query: 553 IIGGCCEVTSYEIQ 566
++GGCC T I+
Sbjct: 311 LLGGCCRTTPTTIR 324
>CGD|CAL0004923 [details] [associations]
symbol:SAM4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008898 "homocysteine S-methyltransferase activity"
evidence=IEA] [GO:0046498 "S-adenosylhomocysteine metabolic
process" evidence=IEA] [GO:0050667 "homocysteine metabolic process"
evidence=IEA] [GO:0019284 "L-methionine biosynthetic process from
S-adenosylmethionine" evidence=IEA] InterPro:IPR003726 Pfam:PF02574
PROSITE:PS50970 CGD:CAL0004923 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 EMBL:AACQ01000177 EMBL:AACQ01000176 eggNOG:COG2040
KO:K00547 RefSeq:XP_711874.1 RefSeq:XP_711903.1 STRING:Q59QD2
GeneID:3646467 GeneID:3646506 KEGG:cal:CaO19.386
KEGG:cal:CaO19.8016 Uniprot:Q59QD2
Length = 311
Score = 268 (99.4 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 92/330 (27%), Positives = 152/330 (46%)
Query: 255 VQTIVYPNKGVKLLDGSFTSQVSR--HTIKDV--DGHPLWSSVYLTTEPEACVETHRDFI 310
VQ I+ K V +DG+ +++ R T G PLWS L PE + H D+I
Sbjct: 4 VQDILDKRKLV--IDGALGTELERLLPTTSTYLPSGSPLWSGQVLIKNPELVEQVHLDYI 61
Query: 311 RGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRP-NV--EALVRAGVDYLAL 367
+ + Y T +Y G+ +D + W+ NV A+ ++G D + +
Sbjct: 62 NVGADMIIT-STYQTSYASLHKYIGYDMDQA----IALWNSALNVAKNAVKKSGRDDVII 116
Query: 368 IKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLAL 427
A SIGPY T+L +GSEY+G Y +T+ +LI +H P E + VD + +
Sbjct: 117 ---------AGSIGPYATLLANGSEYNGDY-QGVTDEELIEYHTPLFEFYENSDVDIICI 166
Query: 428 ETIPXXXXXXXXXXXXREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQA 486
ETIP +++ ++ ++S + + + S G LI A + +P + A
Sbjct: 167 ETIPSFQELKVIIGLAKKYTSKEFFISINPQTGSALSDGTSLIEVAQLFAEINDP-RFVA 225
Query: 487 IGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE-DEYSILHYVPQ 545
+G+NC +V + + P +YPN G V+D+ K++ E + V +
Sbjct: 226 VGINCTSYENVDQISTYLTD-FPL---FIYPNLGFVYDTTVHKFVSKVLQESTWSKSVAK 281
Query: 546 WLE-EGVNIIGGCCEVTSYEIQQMRIMIDE 574
WL V IGGCC T EI+Q+ +I++
Sbjct: 282 WLAFPNVKAIGGCCSTTPAEIKQVAQLINQ 311
Score = 249 (92.7 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 72/246 (29%), Positives = 121/246 (49%)
Query: 6 KVKL-LDGSFTSQVSR--HTIKDV--DGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQ 60
K KL +DG+ +++ R T G PLWS L PE + H D+I GAD+I
Sbjct: 10 KRKLVIDGALGTELERLLPTTSTYLPSGSPLWSGQVLIKNPELVEQVHLDYINVGADMII 69
Query: 61 SSCYQANVDNLTK-LGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIE 119
+S YQ + +L K +GY +A+ L + ++ + +A K + D+ +
Sbjct: 70 TSTYQTSYASLHKYIGYDMDQAIALWNSALNVAKNAVKKSGRD-DVII------------ 116
Query: 120 TAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETIPXXXX 179
A SIGPY T+L +GSEY+G Y +T+ +LI +H P E + VD + +ETIP
Sbjct: 117 -AGSIGPYATLLANGSEYNGDY-QGVTDEELIEYHTPLFEFYENSDVDIICIETIPSFQE 174
Query: 180 XXXXXXXXREFPGQKAWLSFSCKDDTHTSHG-ELISSAVTSCLLANPDQIQAIGVNCVRP 238
+++ ++ ++S + + + S G LI A + +P + A+G+NC
Sbjct: 175 LKVIIGLAKKYTSKEFFISINPQTGSALSDGTSLIEVAQLFAEINDP-RFVAVGINCTSY 233
Query: 239 SHVSTL 244
+V +
Sbjct: 234 ENVDQI 239
>WB|WBGene00020491 [details] [associations]
symbol:T13G4.4 species:6239 "Caenorhabditis elegans"
[GO:0008898 "homocysteine S-methyltransferase activity"
evidence=IEA] InterPro:IPR003726 Pfam:PF02574 PROSITE:PS50970
GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282 eggNOG:COG2040
GeneTree:ENSGT00510000049619 EMBL:FO080889 RefSeq:NP_508223.2
PaxDb:Q966F6 EnsemblMetazoa:T13G4.4.1 EnsemblMetazoa:T13G4.4.2
EnsemblMetazoa:T13G4.4.3 GeneID:188484 KEGG:cel:CELE_T13G4.4
UCSC:T13G4.4 CTD:188484 WormBase:T13G4.4 InParanoid:Q966F6
OMA:TAIGGCC NextBio:938976 Uniprot:Q966F6
Length = 304
Score = 249 (92.7 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 89/323 (27%), Positives = 149/323 (46%)
Query: 265 VKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
V+LLDGS +SQ+ R + + P WS + E ++ F+ ++ S
Sbjct: 2 VRLLDGSMSSQLLRFGYDCNQQENKPHWSFP-ANADMELMENVYKSFLDLEVKVITS--- 57
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
GS ++ + +L + + E ++ L S + S+G
Sbjct: 58 --NTYHFGSTLDKTIPENAEKREL--YEKYFEETCLKL----CHLTTGSSDVEAWGSVGT 109
Query: 383 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV---RAGVDYLALETIPXXXXXXXX 439
T+ D SEY+G Y+D +EA A+ + + R+ + L ETIP
Sbjct: 110 LATMYHDLSEYTGAYMDQ-SEAKKTAYDYFKIILTLFHNRSSIRKLIFETIPSADEGSVA 168
Query: 440 XXXXREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHVST 499
+EFP +A +SF+ K+ HGE I+S V + +P Q+ IG+NC P++V
Sbjct: 169 LDVLQEFPEFEAVISFTFKEHGCLRHGEKITS-VAQQMKQSP-QVLGIGINCTDPNNVLP 226
Query: 500 LVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTE-DEYSILH--YVPQWLEEGVNIIGG 556
+ + Q + VYPNKG DS K+L+ DE ++ V W+E+GV IGG
Sbjct: 227 ALNEL-QPFAFSEVFVYPNKG---DS---KFLEEGIDESNVFTKTLVTSWIEKGVTAIGG 279
Query: 557 CCEVTSYEIQQMRIMIDEFNTKK 579
CC VT+ +I+ ++ ++ + NT +
Sbjct: 280 CCGVTNDQIKVLKPLLGKINTNQ 302
Score = 197 (74.4 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 81/284 (28%), Positives = 124/284 (43%)
Query: 7 VKLLDGSFTSQVSR--HTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCY 64
V+LLDGS +SQ+ R + + P WS + E ++ F+ +I S+ Y
Sbjct: 2 VRLLDGSMSSQLLRFGYDCNQQENKPHWSFP-ANADMELMENVYKSFLDLEVKVITSNTY 60
Query: 65 QANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGH--IETAA 122
L K E +L K + +T K +L TG +E
Sbjct: 61 HFG-STLDKTIPENAEKRELYEKYFE----------ET----CLKLCHLTTGSSDVEAWG 105
Query: 123 SIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALV---RAGVDYLALETIPXXXX 179
S+G T+ D SEY+G Y+D +EA A+ + + R+ + L ETIP
Sbjct: 106 SVGTLATMYHDLSEYTGAYMDQ-SEAKKTAYDYFKIILTLFHNRSSIRKLIFETIPSADE 164
Query: 180 XXXXXXXXREFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPS 239
+EFP +A +SF+ K+ HGE I+S V + +P Q+ IG+NC P+
Sbjct: 165 GSVALDVLQEFPEFEAVISFTFKEHGCLRHGEKITS-VAQQMKQSP-QVLGIGINCTDPN 222
Query: 240 HVSTLVRCIKQSHPTVQTIVYPNKG-VKLLD-GSFTSQVSRHTI 281
+V + + Q + VYPNKG K L+ G S V T+
Sbjct: 223 NVLPALNEL-QPFAFSEVFVYPNKGDSKFLEEGIDESNVFTKTL 265
>ASPGD|ASPL0000037651 [details] [associations]
symbol:AN3378 species:162425 "Emericella nidulans"
[GO:0008898 "homocysteine S-methyltransferase activity"
evidence=IEA;RCA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=IEA;RCA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003726 Pfam:PF02574 PROSITE:PS50970 EMBL:BN001306
GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282 EMBL:AACD01000055
eggNOG:COG2040 HOGENOM:HOG000265278 KO:K00547 OrthoDB:EOG42NN8C
RefSeq:XP_660982.1 ProteinModelPortal:Q5B7V2 STRING:Q5B7V2
EnsemblFungi:CADANIAT00009662 GeneID:2874359 KEGG:ani:AN3378.2
OMA:ASHTIND Uniprot:Q5B7V2
Length = 355
Score = 161 (61.7 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 51/181 (28%), Positives = 79/181 (43%)
Query: 6 KVKLLDGSFTSQVSRH--TIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
K+ LLDG + + + I PLWSS L + P HR F AGADI+ ++
Sbjct: 2 KILLLDGGLGTTLESYPFNITFTSETPLWSSHLLISSPSTLQSAHRAFYDAGADILLTAT 61
Query: 64 YQANVDNL--TKLGYSEQEALDLLHKSVQLMNSA-KDKENQTPDINLNKTFNLLTGHIET 120
YQ++++ T ++ +A D + ++ L+ A Q P
Sbjct: 62 YQSSIEGFARTDASHTINDAGDYMRSAIPLVRGAIPSSARQRPQ------------QCRV 109
Query: 121 AASIGPYGTVLRD-GSEYSGHYVDSMTEADLIA-WHRPNVEALV--RAG---VDYLALET 173
A S+GPYG + +EY+G Y M D + WH + V R VD++A ET
Sbjct: 110 ALSLGPYGATMSPVAAEYTGAYPPEMDGEDALRQWHAGRLNVFVDDRESWDQVDFVAFET 169
Query: 174 I 174
+
Sbjct: 170 L 170
Score = 114 (45.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 71/289 (24%), Positives = 108/289 (37%)
Query: 265 VKLLDGSFTSQVSRH--TIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
+ LLDG + + + I PLWSS L + P HR F + A I
Sbjct: 3 ILLLDGGLGTTLESYPFNITFTSETPLWSSHLLISSPSTLQSAHRAFY----DAGADILL 58
Query: 323 YGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGP 382
T + E S T D + R + LVR + A +P + A S+GP
Sbjct: 59 TATY-QSSIEGFARTDASHTINDAGDYMRSAIP-LVRGAIPSSARQRPQ-QCRVALSLGP 115
Query: 383 YGTVLRD-GSEYSGHYVDSMTEADLIA-WHRPNVEALV--RAG---VDYLALETIPXXXX 435
YG + +EY+G Y M D + WH + V R VD++A ET+
Sbjct: 116 YGATMSPVAAEYTGAYPPEMDGEDALRQWHAGRLNVFVDDRESWDQVDFVAFETLIRADE 175
Query: 436 XXXXXXXXREF---PG----QKAWLS---FSCKDDTHTSHGELISSAVTSCL-LANPDQI 484
++ P +K W F ++ T + + +AV L P
Sbjct: 176 VCAVRGAMKDVCVGPEIHRRRKPWWICGVFPAEEVDRTQVRQWVDAAVGQRPGLPRP--- 232
Query: 485 QAIGVNCVRPSHVSTLVRCIKQS-HPTVQTIVYPNKGGVWDSVHMK-WL 531
IG+NC R +V+ +V ++ H + WD+ K WL
Sbjct: 233 WGIGLNCTRIENVAKIVAIMRDELHCLLSRGKEDGFVDEWDAASGKPWL 281
Score = 62 (26.9 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 24/72 (33%), Positives = 34/72 (47%)
Query: 514 IVYPN--KGGVWDSVHMKWLDTE-------DEYSILHYVPQWLE---EGVNIIGGCCEVT 561
++YP+ KG +D V W+ E DE S+ V E EG+ I+GGCC
Sbjct: 282 VLYPDGTKGEKYDPVTKTWVARETVVRCPWDE-SLWDVVQGQSEGDWEGI-IVGGCCRAG 339
Query: 562 SYEIQQMRIMID 573
+I +R ID
Sbjct: 340 PADIAALRRRID 351
>SGD|S000006194 [details] [associations]
symbol:SAM4 "S-adenosylmethionine-homocysteine
methyltransferase" species:4932 "Saccharomyces cerevisiae"
[GO:0008898 "homocysteine S-methyltransferase activity"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0032259 "methylation"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0046498 "S-adenosylhomocysteine metabolic
process" evidence=IDA] [GO:0009086 "methionine biosynthetic
process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0019284 "L-methionine biosynthetic process from
S-adenosylmethionine" evidence=IDA] [GO:0050667 "homocysteine
metabolic process" evidence=IDA] InterPro:IPR003726 Pfam:PF02574
PROSITE:PS50970 SGD:S000006194 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 EMBL:BK006949 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GO:GO:0050667 GO:GO:0046498 eggNOG:COG2040
KO:K00547 OMA:EGYMEYL GO:GO:0019284 GeneTree:ENSGT00510000049619
HOGENOM:HOG000066018 OrthoDB:EOG4MSH79 EMBL:Z73629 PIR:S65306
RefSeq:NP_015050.1 ProteinModelPortal:Q08985 SMR:Q08985
STRING:Q08985 PaxDb:Q08985 PeptideAtlas:Q08985 EnsemblFungi:YPL273W
GeneID:855855 KEGG:sce:YPL273W CYGD:YPL273w NextBio:980460
Genevestigator:Q08985 GermOnline:YPL273W Uniprot:Q08985
Length = 325
Score = 170 (64.9 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 48/203 (23%), Positives = 87/203 (42%)
Query: 380 IGPYGT-VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALETIPXXXXXX 437
IGP+G + R E++G Y D + +P +E + +D + ETIP
Sbjct: 126 IGPWGAHICR---EFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFETIPNIHELK 182
Query: 438 XXXXXXREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCL-LANPDQIQAIGVNCVR 493
+ ++ S + G E I+ + NP+ +G+NCV
Sbjct: 183 AILSWDESILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINPN-FSFLGINCVS 241
Query: 494 PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILH-YVPQWLEEGVN 552
+ ++ + Q+ P + + YPN G V+D+ WL D+ + V Q++ G
Sbjct: 242 FNQSPDILESLHQALPNMALLAYPNSGEVYDTEKKIWLPNSDKLNSWDTVVKQYISSGAR 301
Query: 553 IIGGCCEVTSYEIQQMRIMIDEF 575
IIGGCC + +IQ++ + ++
Sbjct: 302 IIGGCCRTSPKDIQEISAAVKKY 324
Score = 127 (49.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 63/275 (22%), Positives = 111/275 (40%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP----EACV------ETHRDFIRAG 55
KV +LDG +++ IK + P+WS++ +E E+ E DF+ AG
Sbjct: 16 KVLVLDGGQGTELENRGIKVAN--PVWSTIPFISESFWSDESSANRKIVKEMFNDFLNAG 73
Query: 56 ADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLT 115
A+I+ ++ YQ + ++ SE + L + L+N D I +K L
Sbjct: 74 AEILMTTTYQTSYKSV-----SENTPIRTLSEYNNLLNRIVDFSRNC--IGEDK---YLI 123
Query: 116 GHIETAASIGPYGT-VLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAG-VDYLALET 173
G IGP+G + R E++G Y D + +P +E + +D + ET
Sbjct: 124 G------CIGPWGAHICR---EFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFET 174
Query: 174 IPXXXXXXXXXXXXREFPGQKAWLSFSCKDDTHTSHG---ELISSAVTSCL-LANPDQIQ 229
IP + ++ S + G E I+ + NP+
Sbjct: 175 IPNIHELKAILSWDESILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINPN-FS 233
Query: 230 AIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
+G+NCV + ++ + Q+ P + + YPN G
Sbjct: 234 FLGINCVSFNQSPDILESLHQALPNMALLAYPNSG 268
>SGD|S000003985 [details] [associations]
symbol:MHT1 "S-methylmethionine-homocysteine
methyltransferase" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0009086 "methionine
biosynthetic process" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=IMP] [GO:0008652 "cellular amino acid biosynthetic
process" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
InterPro:IPR003726 Pfam:PF02574 PROSITE:PS50970 SGD:S000003985
GO:GO:0005737 GO:GO:0046872 EMBL:BK006945 GO:GO:0009086 EMBL:Z47973
GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282 GO:GO:0000096
eggNOG:COG2040 OMA:ACETIPC EMBL:Z73167 EMBL:AY558194 PIR:S50958
RefSeq:NP_013038.1 ProteinModelPortal:Q12525 DIP:DIP-1934N
IntAct:Q12525 MINT:MINT-397842 STRING:Q12525 PaxDb:Q12525
EnsemblFungi:YLL062C GeneID:850664 KEGG:sce:YLL062C CYGD:YLL062c
GeneTree:ENSGT00510000049619 HOGENOM:HOG000066018 OrthoDB:EOG4MSH79
NextBio:966638 Genevestigator:Q12525 GermOnline:YLL062C
Uniprot:Q12525
Length = 324
Score = 169 (64.5 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 70/337 (20%), Positives = 146/337 (43%)
Query: 253 PTVQTIV-YPNKGVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEP--EACVETHR-- 307
P + IV +P K V +LDG +++ I +++ P+WS+ T+E E + +
Sbjct: 5 PIKELIVEHPGK-VLILDGGQGTELENRGI-NINS-PVWSAAPFTSESFWEPSSQERKVV 61
Query: 308 -DFIRGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLA 366
+ R + A+I T+ + S + T +A ++ ++ +V +++
Sbjct: 62 EEMYRDFMIAGANI--LMTITYQANFQS---ISENTSIKTLAAYKRFLDKIVSFTREFIG 116
Query: 367 LIKPSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-AGVDYL 425
+ I S IGP+ + EY+G Y D + +P +E + +D +
Sbjct: 117 EERYLIGS-----IGPWAAHV--SCEYTGDYGPHPENIDYYGFFKPQLENFNQNRDIDLI 169
Query: 426 ALETIPXXXXXXXXXXXXREFPGQKAWLSFSCKDDTHTSHGELISS-AVTSCLLANP--D 482
ETIP + + ++ S D++ G + +V L N
Sbjct: 170 GFETIPNFHELKAILSWDEDIISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLGNKINK 229
Query: 483 QIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKW---LDTEDEYSI 539
+ +GVNCV + + +++ + + P + +VYPN G +++ W + D++
Sbjct: 230 NLLLMGVNCVSFNQSALILKMLHEHLPGMPLLVYPNSGEIYNPKEKTWHRPTNKLDDWET 289
Query: 540 LHYVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEFN 576
V ++++ G IIGGCC + +I ++ +D+++
Sbjct: 290 T--VKKFVDNGARIIGGCCRTSPKDIAEIASAVDKYS 324
Score = 146 (56.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 63/272 (23%), Positives = 117/272 (43%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTE----PEA-----CVETHRDFIRAGA 56
KV +LDG +++ I +++ P+WS+ T+E P + E +RDF+ AGA
Sbjct: 16 KVLILDGGQGTELENRGI-NINS-PVWSAAPFTSESFWEPSSQERKVVEEMYRDFMIAGA 73
Query: 57 DIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTG 116
+I+ + YQAN ++ SE ++ K++ DK ++ + F +
Sbjct: 74 NILMTITYQANFQSI-----SENTSI----KTLAAYKRFLDKI-----VSFTREF--IGE 117
Query: 117 HIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVR-AGVDYLALETIP 175
SIGP+ + EY+G Y D + +P +E + +D + ETIP
Sbjct: 118 ERYLIGSIGPWAAHV--SCEYTGDYGPHPENIDYYGFFKPQLENFNQNRDIDLIGFETIP 175
Query: 176 XXXXXXXXXXXXREFPGQKAWLSFSCKDDTHTSHGELISS-AVTSCLLANP--DQIQAIG 232
+ + ++ S D++ G + +V L N + +G
Sbjct: 176 NFHELKAILSWDEDIISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLGNKINKNLLLMG 235
Query: 233 VNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKG 264
VNCV + + +++ + + P + +VYPN G
Sbjct: 236 VNCVSFNQSALILKMLHEHLPGMPLLVYPNSG 267
>POMBASE|SPAC57A7.07c [details] [associations]
symbol:SPAC57A7.07c "homocysteine methyltransferase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000096
"sulfur amino acid metabolic process" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006534 "cysteine metabolic process" evidence=NAS] [GO:0008898
"homocysteine S-methyltransferase activity" evidence=ISO]
InterPro:IPR003726 Pfam:PF02574 PROSITE:PS50970
PomBase:SPAC57A7.07c GO:GO:0005634 GO:GO:0005737 EMBL:CU329670
GO:GO:0006534 GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282
eggNOG:COG2040 PIR:T38947 RefSeq:NP_593374.1
ProteinModelPortal:P87138 EnsemblFungi:SPAC57A7.07c.1
GeneID:2542156 KEGG:spo:SPAC57A7.07c OMA:IREESIP OrthoDB:EOG42NN8C
NextBio:20803228 Uniprot:P87138
Length = 308
Score = 166 (63.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 74/315 (23%), Positives = 138/315 (43%)
Query: 267 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGPYGTV 326
+LDG T+ + + + + LW+S L PE V+ H +F++ I + T
Sbjct: 3 MLDGGSTAILPKLP-ESISESRLWTSEALVRYPEIVVKHHEEFLK----VCDIISTF-TY 56
Query: 327 LRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALIKPSISSQTAASIGPYGTV 386
D S Y V+ + + A N L ++L L P+ A +G +
Sbjct: 57 QLDASIYD-EKVEGVPLKQVYA----NSIGLPVYAREHLGL--PN--KYIALCLGSHAAT 107
Query: 387 LRDGSEYSGHYVDSMTEADLIA-WHRPNVEALVRAG------VDYLALETIPXXXXXXXX 439
+ EY Y D T+ +++ +H+ +EA+ + +D++A E++P
Sbjct: 108 IPGCMEYKMIY-DKPTDFEMLYNFHKNRIEAIQASNPKAFEKIDFIAFESLPHVTEAEVV 166
Query: 440 XXXXREFPG--QKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRPSHV 497
++ G ++ W++ +C + S E +SS ++ L N D I IGVNC S +
Sbjct: 167 CQLIQDMKGWSKRCWITCTCPE---RSTIERVSSIISKILSINHDSIWGIGVNCFHLSLL 223
Query: 498 STLVRCIKQSHPT-VQTIVYPNKGGVWDSVHMKWL--DTE------DEYSILHYVPQWLE 548
+ + + P+ + I+YP+ G++ + + T+ +E+S + L
Sbjct: 224 EPIAKMLSSLLPSNITAILYPDGRGLYQNPDGTFSPGSTDHPAPSPEEWSTITAKYSNLH 283
Query: 549 EGVNIIGGCCEVTSY 563
G I+GGCCE T+Y
Sbjct: 284 NGNLILGGCCE-TNY 297
Score = 162 (62.1 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 71/298 (23%), Positives = 134/298 (44%)
Query: 9 LLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQANV 68
+LDG T+ + + + + LW+S L PE V+ H +F++ DII + YQ +
Sbjct: 3 MLDGGSTAILPKLP-ESISESRLWTSEALVRYPEIVVKHHEEFLKV-CDIISTFTYQLDA 60
Query: 69 DNLTKLGYSEQ-EALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLLTGHIETAASIGPY 127
Y E+ E + L K V NS P + + L +I A +G +
Sbjct: 61 SI-----YDEKVEGVPL--KQVYA-NSIG-----LP-VYAREHLGLPNKYI--ALCLGSH 104
Query: 128 GTVLRDGSEYSGHYVDSMTEADLIA-WHRPNVEALVRAG------VDYLALETIPXXXXX 180
+ EY Y D T+ +++ +H+ +EA+ + +D++A E++P
Sbjct: 105 AATIPGCMEYKMIY-DKPTDFEMLYNFHKNRIEAIQASNPKAFEKIDFIAFESLPHVTEA 163
Query: 181 XXXXXXXREFPG--QKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAIGVNCVRP 238
++ G ++ W++ +C + S E +SS ++ L N D I IGVNC
Sbjct: 164 EVVCQLIQDMKGWSKRCWITCTCPE---RSTIERVSSIISKILSINHDSIWGIGVNCFHL 220
Query: 239 SHVSTLVRCIKQSHPT-VQTIVYPN-KGV-KLLDGSFTSQVSRHTIKDVDGHPLWSSV 293
S + + + + P+ + I+YP+ +G+ + DG+F+ + H + WS++
Sbjct: 221 SLLEPIAKMLSSLLPSNITAILYPDGRGLYQNPDGTFSPGSTDHPAPSPEE---WSTI 275
>SGD|S000004940 [details] [associations]
symbol:YMR321C "Putative protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008898 "homocysteine S-methyltransferase activity"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR003726
Pfam:PF02574 PROSITE:PS50970 SGD:S000004940 EMBL:BK006946
EMBL:Z54141 RefSeq:NP_014054.3 GeneID:855371 KEGG:sce:YMR321C
GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282 KO:K01689
RefSeq:NP_014056.3 GeneID:855373 KEGG:sce:YMR323W
GeneTree:ENSGT00510000049619 OrthoDB:EOG4MSH79 PIR:S69879
ProteinModelPortal:Q04898 SMR:Q04898 STRING:Q04898
EnsemblFungi:YMR321C CYGD:YMR321c NextBio:979154
Genevestigator:Q04898 GermOnline:YMR321C Uniprot:Q04898
Length = 105
Score = 148 (57.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 28/97 (28%), Positives = 52/97 (53%)
Query: 480 NPDQIQAIGVNCVRPSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSI 539
NP+ + +G+NCV + ++ + Q+ P + + YPN G V+D+ WL D+ +
Sbjct: 9 NPN-LSFLGINCVSFNQSPDILESLHQALPNMALLAYPNSGEVYDTEKKIWLPNSDKLNS 67
Query: 540 LH-YVPQWLEEGVNIIGGCCEVTSYEIQQMRIMIDEF 575
V Q++ G IIGGCC + +IQ++ + ++
Sbjct: 68 WDTVVKQYISSGARIIGGCCRTSPKDIQEISAAVKKY 104
>TIGR_CMR|SPO_3398 [details] [associations]
symbol:SPO_3398 "homocysteine S-methyltransferase family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008152
"metabolic process" evidence=ISS] [GO:0008898 "homocysteine
S-methyltransferase activity" evidence=ISS] InterPro:IPR003726
Pfam:PF02574 PROSITE:PS50970 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 HOGENOM:HOG000265278 RefSeq:YP_168594.1
ProteinModelPortal:Q5LN14 GeneID:3195042 KEGG:sil:SPO3398
PATRIC:23380251 OMA:NSYALVP ProtClustDB:CLSK934146 Uniprot:Q5LN14
Length = 298
Score = 88 (36.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 25/77 (32%), Positives = 36/77 (46%)
Query: 7 VKLLDGSFTSQVSRHTIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSCYQA 66
+ LLDGS ++ + K PLWS+ + P HRD+ AGA I ++ Y
Sbjct: 4 ITLLDGSIGQELVKRAGKRPT--PLWSTSVMLEAPYHVGAVHRDYFDAGATIATTNTYAV 61
Query: 67 NVDNLTKLGYSEQ-EAL 82
D L G ++ EAL
Sbjct: 62 LRDRLEPAGIGDRFEAL 78
Score = 79 (32.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 49/218 (22%), Positives = 82/218 (37%)
Query: 355 EALVRAGVDYLALIKPSISS-QTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPN 413
EAL+ +D + + S + A ++GP G + Y EA+ A + +
Sbjct: 76 EALIDTALDQAESARAAHGSGRIAGALGPLG------ASYRPDICPPPEEAE--ALYADS 127
Query: 414 VEALVRAGVDYLALETIPXXXXXXXXXXXXREFPGQKAWLSFSCKDD--THTSHGELISS 471
V A+ VD +ET + WLS + DD + GE +
Sbjct: 128 VRAM-NDRVDLFLIETAASVAQAEGALRGA-SLGTKPVWLSVTVMDDDGSRLRSGEGVGE 185
Query: 472 AVTSCLLANPDQIQAIGVNCVRPSHVSTLVRCIKQ-SHP--------TVQTIVYPNKGGV 522
+ Q QA+ VNC RP V+ + I P T T +
Sbjct: 186 LAA---IVKQYQPQAVLVNCSRPEAVAAALDIIAGFGLPFGAYANGFTRITEAFLESRPT 242
Query: 523 WDSVHMKWLDTEDEYSILHYVPQWLEEGVNIIGGCCEV 560
+++ + T + Y+ + W+++ I+GGCCEV
Sbjct: 243 VEALTARVDLTPEAYA--DFALGWVDQSATIVGGCCEV 278
>UNIPROTKB|F1NGK3 [details] [associations]
symbol:MTR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008705 "methionine synthase
activity" evidence=IEA] [GO:0008898 "homocysteine
S-methyltransferase activity" evidence=IEA] [GO:0042558
"pteridine-containing compound metabolic process" evidence=IEA]
[GO:0031419 "cobalamin binding" evidence=IEA] InterPro:IPR000489
InterPro:IPR003726 InterPro:IPR003759 InterPro:IPR004223
InterPro:IPR006158 InterPro:IPR011005 InterPro:IPR011822
Pfam:PF00809 Pfam:PF02310 Pfam:PF02574 Pfam:PF02607
PIRSF:PIRSF000381 PROSITE:PS50970 PROSITE:PS50972 PROSITE:PS50974
PROSITE:PS51332 PROSITE:PS51337 SMART:SM01018 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GO:GO:0031419 Gene3D:3.20.20.20 SUPFAM:SSF51717
GO:GO:0042558 Gene3D:3.40.50.280 SUPFAM:SSF52242 GO:GO:0008705
Gene3D:1.10.1240.10 PANTHER:PTHR21091:SF9 SUPFAM:SSF56507
SUPFAM:SSF47644 TIGRFAMs:TIGR02082 GeneTree:ENSGT00420000029824
EMBL:AADN02011578 EMBL:AADN02011579 EMBL:AADN02011580
EMBL:AADN02011581 EMBL:AADN02011582 EMBL:AADN02011583
EMBL:AADN02011584 EMBL:AADN02011585 IPI:IPI00576083
Ensembl:ENSGALT00000023356 ArrayExpress:F1NGK3 Uniprot:F1NGK3
Length = 988
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 72/309 (23%), Positives = 127/309 (41%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD--GH-------PLWSSVYLT--TEPEACVETHRDFIRA 54
++ +LDG + + +H + + D GH PL + L T+P+ + H++++ A
Sbjct: 18 RIMILDGGMGTMIQQHALSEEDFRGHEFKDHSKPLKGNNDLLSITQPDIICDIHKEYLLA 77
Query: 55 GADIIQSSCYQANVDNLTKLGYS-EQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNL 113
GADII+++ + + + + Y E A L S ++ A D I K +
Sbjct: 78 GADIIETNTFSST--RVAQADYGLEHLAYRLNRISAEVARKAADDVTAQTGI---KRY-- 130
Query: 114 LTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 173
A SIGP L ++T +L+ + + L+ GVD + +ET
Sbjct: 131 ------VAGSIGPTNRTLSVSPSVERPDYRNITFDELVEAYTEQAKGLLDGGVDVMLVET 184
Query: 174 IPXXXXXXXXXXXXR-----EFPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQ 227
I E+ + ++S + D + T G+ + V S + P
Sbjct: 185 IFDTANAKAALFALHKLFEEEYAPRPIFVSGTIVDKSGRTLSGQTGEAFVISVSHSKP-- 242
Query: 228 IQAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSF--TSQVSRH 279
IG+NC +RP + T+ +C T I YPN G+ G + T +V+
Sbjct: 243 -LCIGLNCALGAVEMRP-FIETIGKCT-----TAYVICYPNAGLPNTFGGYDETPEVTAK 295
Query: 280 TIKD--VDG 286
IK+ +DG
Sbjct: 296 HIKNFALDG 304
>UNIPROTKB|E2R716 [details] [associations]
symbol:MTR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008705 "methionine synthase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0031419
"cobalamin binding" evidence=IEA] [GO:0042558 "pteridine-containing
compound metabolic process" evidence=IEA] [GO:0008898 "homocysteine
S-methyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000489 InterPro:IPR003726
InterPro:IPR003759 InterPro:IPR004223 InterPro:IPR006158
InterPro:IPR011005 InterPro:IPR011822 Pfam:PF00809 Pfam:PF02310
Pfam:PF02574 Pfam:PF02607 Pfam:PF02965 PIRSF:PIRSF000381
PROSITE:PS50970 PROSITE:PS50972 PROSITE:PS50974 PROSITE:PS51332
PROSITE:PS51337 SMART:SM01018 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282
GO:GO:0031419 Gene3D:3.20.20.20 SUPFAM:SSF51717 GO:GO:0042558
Gene3D:3.40.50.280 SUPFAM:SSF52242 GO:GO:0008705
Gene3D:1.10.1240.10 Gene3D:3.10.196.10 PANTHER:PTHR21091:SF9
SUPFAM:SSF56507 SUPFAM:SSF47644 TIGRFAMs:TIGR02082
GeneTree:ENSGT00420000029824 OMA:VRKEFWG EMBL:AAEX03002674
EMBL:AAEX03002673 Ensembl:ENSCAFT00000016858 Uniprot:E2R716
Length = 1268
Score = 139 (54.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 69/309 (22%), Positives = 129/309 (41%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD--GHPLW---------SSVYLTTEPEACVETHRDFIRA 54
++ +LDG + + RH + + D GH + + T+P + H+D++ A
Sbjct: 29 RIMVLDGGMGTMIQRHKLSEEDFRGHEFQDHARSLKGNNDILSITQPNVIYQIHKDYLLA 88
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHK-SVQLMNSAKDKENQTPDINLNKTFNL 113
GADII+++ + + N+ + Y + ++K S + A ++ + I K F
Sbjct: 89 GADIIETNTFSST--NVAQADYGLEHLAYQMNKCSAGVARKAAEEVSFQTGI---KRF-- 141
Query: 114 LTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 173
A ++GP L ++T +L+ ++ + L+ GVD L +ET
Sbjct: 142 ------VAGALGPTNKTLSVSPSVEKPDYRNITFDELVEAYKEQAKGLLDGGVDILLIET 195
Query: 174 IPXXXXXXXXXXXXR-----EFPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQ 227
I + E+ + ++S + D + T G+ + V S A+P
Sbjct: 196 IFDTANAKAALFALQTLFEEEYSPRPIFISGTIIDKSGRTLSGQTGEAFVISVSHASP-- 253
Query: 228 IQAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSF--TSQVSRH 279
IG+NC +RP + T+ +C T + YPN G+ G + T Q+
Sbjct: 254 -LCIGLNCALGAAEMRP-FIETIGKCT-----TAYVLCYPNAGLPNTFGDYDETPQMMAM 306
Query: 280 TIKD--VDG 286
+KD +DG
Sbjct: 307 QLKDFAMDG 315
Score = 40 (19.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 484 IQAIGVNC-VRPSHVSTLVRCIKQSHPTV 511
+ +G C P H+ + + +K P V
Sbjct: 317 VNIVGGCCGTSPDHIREIAKAVKNCKPRV 345
>UNIPROTKB|F1NLY0 [details] [associations]
symbol:MTR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008898
"homocysteine S-methyltransferase activity" evidence=IEA]
[GO:0042558 "pteridine-containing compound metabolic process"
evidence=IEA] [GO:0031419 "cobalamin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008705 "methionine
synthase activity" evidence=IEA] InterPro:IPR000489
InterPro:IPR003726 InterPro:IPR003759 InterPro:IPR004223
InterPro:IPR006158 InterPro:IPR011005 InterPro:IPR011822
Pfam:PF00809 Pfam:PF02310 Pfam:PF02574 Pfam:PF02607 Pfam:PF02965
PIRSF:PIRSF000381 PROSITE:PS50970 PROSITE:PS50972 PROSITE:PS50974
PROSITE:PS51332 PROSITE:PS51337 SMART:SM01018 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GO:GO:0031419 Gene3D:3.20.20.20 SUPFAM:SSF51717
GO:GO:0042558 Gene3D:3.40.50.280 SUPFAM:SSF52242 GO:GO:0008705
Gene3D:1.10.1240.10 Gene3D:3.10.196.10 PANTHER:PTHR21091:SF9
SUPFAM:SSF56507 SUPFAM:SSF47644 TIGRFAMs:TIGR02082
GeneTree:ENSGT00420000029824 OMA:VRKEFWG EMBL:AADN02011578
EMBL:AADN02011579 EMBL:AADN02011580 EMBL:AADN02011581
EMBL:AADN02011582 EMBL:AADN02011583 EMBL:AADN02011584
EMBL:AADN02011585 IPI:IPI00596325 Ensembl:ENSGALT00000017613
ArrayExpress:F1NLY0 Uniprot:F1NLY0
Length = 1262
Score = 130 (50.8 bits), Expect = 0.00015, P = 0.00015
Identities = 72/309 (23%), Positives = 127/309 (41%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD--GH-------PLWSSVYLT--TEPEACVETHRDFIRA 54
++ +LDG + + +H + + D GH PL + L T+P+ + H++++ A
Sbjct: 27 RIMILDGGMGTMIQQHALSEEDFRGHEFKDHSKPLKGNNDLLSITQPDIICDIHKEYLLA 86
Query: 55 GADIIQSSCYQANVDNLTKLGYS-EQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNL 113
GADII+++ + + + + Y E A L S ++ A D I K +
Sbjct: 87 GADIIETNTFSST--RVAQADYGLEHLAYRLNRISAEVARKAADDVTAQTGI---KRY-- 139
Query: 114 LTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 173
A SIGP L ++T +L+ + + L+ GVD + +ET
Sbjct: 140 ------VAGSIGPTNRTLSVSPSVERPDYRNITFDELVEAYTEQAKGLLDGGVDVMLVET 193
Query: 174 IPXXXXXXXXXXXXR-----EFPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQ 227
I E+ + ++S + D + T G+ + V S + P
Sbjct: 194 IFDTANAKAALFALHKLFEEEYAPRPIFVSGTIVDKSGRTLSGQTGEAFVISVSHSKP-- 251
Query: 228 IQAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSF--TSQVSRH 279
IG+NC +RP + T+ +C T I YPN G+ G + T +V+
Sbjct: 252 -LCIGLNCALGAVEMRP-FIETIGKCT-----TAYVICYPNAGLPNTFGGYDETPEVTAK 304
Query: 280 TIKD--VDG 286
IK+ +DG
Sbjct: 305 HIKNFALDG 313
>DICTYBASE|DDB_G0284699 [details] [associations]
symbol:mtr "cobalamin-dependent methionine synthase"
species:44689 "Dictyostelium discoideum" [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0042558 "pteridine-containing compound metabolic
process" evidence=IEA] [GO:0031419 "cobalamin binding"
evidence=IEA] [GO:0009086 "methionine biosynthetic process"
evidence=IEA;ISS] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA] [GO:0008705 "methionine synthase activity"
evidence=IEA;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0032259 "methylation"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] InterPro:IPR000489 InterPro:IPR003726
InterPro:IPR003759 InterPro:IPR004223 InterPro:IPR006158
InterPro:IPR011005 InterPro:IPR011822 Pfam:PF00809 Pfam:PF02310
Pfam:PF02574 Pfam:PF02607 Pfam:PF02965 PIRSF:PIRSF000381
PROSITE:PS50970 PROSITE:PS50972 PROSITE:PS50974 PROSITE:PS51332
PROSITE:PS51337 SMART:SM01018 dictyBase:DDB_G0284699
GenomeReviews:CM000153_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
UniPathway:UPA00051 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GO:GO:0031419 EMBL:AAFI02000070 Gene3D:3.20.20.20
SUPFAM:SSF51717 GO:GO:0042558 Gene3D:3.40.50.280 SUPFAM:SSF52242
GO:GO:0008705 HSSP:P13009 eggNOG:COG1410 KO:K00548
Gene3D:1.10.1240.10 Gene3D:3.10.196.10 PANTHER:PTHR21091:SF9
SUPFAM:SSF56507 SUPFAM:SSF47644 TIGRFAMs:TIGR02082 OMA:VRKEFWG
RefSeq:XP_638483.1 ProteinModelPortal:Q54P92 SMR:Q54P92
STRING:Q54P92 PRIDE:Q54P92 EnsemblProtists:DDB0230138
GeneID:8624734 KEGG:ddi:DDB_G0284699 ProtClustDB:CLSZ2430243
Uniprot:Q54P92
Length = 1260
Score = 128 (50.1 bits), Expect = 0.00025, P = 0.00025
Identities = 78/338 (23%), Positives = 136/338 (40%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD--G-------HPLWSSVYLT--TEPEACVETHRDFIRA 54
++ +LDG+ +++ + +KD D G H L + L T+P E H ++ A
Sbjct: 23 RIMVLDGAMGTEIQKFKLKDNDYRGEEFKDFPHELGGNNDLLSLTQPHIIREIHCKYLEA 82
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLH-KSVQLMNSAKDKENQTPDINLNKTFNL 113
GAD I+++ + N+ ++ Y + + ++ +S +L SA + E D + +
Sbjct: 83 GADFIETNTFNGNI--FSQADYKMEHLVKRINIESARLAKSACE-EYTKKDPSRPRFVCG 139
Query: 114 LTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 173
G ASI P +V R E D +L++ + VEALV G+D + +ET
Sbjct: 140 AVGPTNKTASISP--SVERP--EARNVLFD-----ELVSGYLEQVEALVEGGIDVILVET 190
Query: 174 IPXXXXXXXXXXXXREF-----PGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQ 227
+ EF P ++S + D + T G+ + TS AN
Sbjct: 191 VFDSLNCKAALFAIEEFFKTYSPRLPVFVSGTIVDKSGRTLSGQTGEAFYTSVASAN--- 247
Query: 228 IQAIGVNC-VRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSF--TSQVSRHTIKDV 284
+ G+NC + + ++ I + + YPN G+ G + T ++ IK+
Sbjct: 248 LMVFGLNCALGAQEMRPFLQNISKCSECYVSC-YPNAGLPNTFGGYDETPEMMAEQIKEF 306
Query: 285 DGHPLWSSVYLTTEPEACVETHRDFIRGHIETAASIGP 322
L + V C T D IR I P
Sbjct: 307 AESGLLNIV------GGCCGTSPDHIRAFCNAIEGIAP 338
>TIGR_CMR|BA_4478 [details] [associations]
symbol:BA_4478 "5-methyltetrahydrofolate--homocysteine
methyltransferase" species:198094 "Bacillus anthracis str. Ames"
[GO:0008705 "methionine synthase activity" evidence=ISS]
[GO:0009086 "methionine biosynthetic process" evidence=ISS]
InterPro:IPR000489 InterPro:IPR003726 InterPro:IPR003759
InterPro:IPR004223 InterPro:IPR006158 InterPro:IPR011005
InterPro:IPR011822 Pfam:PF00809 Pfam:PF02310 Pfam:PF02574
Pfam:PF02607 Pfam:PF02965 PIRSF:PIRSF000381 PROSITE:PS50970
PROSITE:PS50972 PROSITE:PS50974 PROSITE:PS51332 PROSITE:PS51337
SMART:SM01018 GO:GO:0046872 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0008270 GO:GO:0005622 GO:GO:0008898
Gene3D:3.20.20.330 SUPFAM:SSF82282 GO:GO:0031419 Gene3D:3.20.20.20
SUPFAM:SSF51717 GO:GO:0042558 Gene3D:3.40.50.280 SUPFAM:SSF52242
GO:GO:0008705 HSSP:P13009 KO:K00548 Gene3D:1.10.1240.10
Gene3D:3.10.196.10 SUPFAM:SSF56507 SUPFAM:SSF47644
TIGRFAMs:TIGR02082 OMA:VRKEFWG HOGENOM:HOG000251408
RefSeq:NP_846703.1 RefSeq:YP_021121.2 RefSeq:YP_030405.1
ProteinModelPortal:Q81LY1 IntAct:Q81LY1 DNASU:1087945
EnsemblBacteria:EBBACT00000011864 EnsemblBacteria:EBBACT00000015213
EnsemblBacteria:EBBACT00000020664 GeneID:1087945 GeneID:2816756
GeneID:2851208 KEGG:ban:BA_4478 KEGG:bar:GBAA_4478 KEGG:bat:BAS4156
ProtClustDB:CLSK873084 BioCyc:BANT260799:GJAJ-4212-MONOMER
BioCyc:BANT261594:GJ7F-4354-MONOMER Uniprot:Q81LY1
Length = 1132
Score = 89 (36.4 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 27/86 (31%), Positives = 40/86 (46%)
Query: 486 AIGVNCVR-PSHVSTLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYSILHYVP 544
++G+NC P + +R + + YPN G + H E S+ V
Sbjct: 217 SVGLNCATGPEFMRDHIRSLSDLSECYISC-YPNAGLPDEDGHYH----ESPSSLAEKVK 271
Query: 545 QWLEEG-VNIIGGCCEVTSYEIQQMR 569
++ EEG VNIIGGCC T I+ M+
Sbjct: 272 RFAEEGWVNIIGGCCGTTPEHIKAMK 297
Score = 86 (35.3 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 29/95 (30%), Positives = 48/95 (50%)
Query: 7 VKLLDGSFTSQVSRH--TIKDVDGHPLWS-SVYLT-TEPEACVETHRDFIRAGADIIQSS 62
+ LLDG+ + + + T +D G + YL T P+ ++ H+ +I AGADII+++
Sbjct: 12 ILLLDGAMGTMIQQEDLTAEDFGGEEYEGCNEYLVETRPDVILKIHKAYIEAGADIIETN 71
Query: 63 CYQANVDNLTKLGYSEQEALD--LLHKSVQLMNSA 95
+ A N+ Y E LD L K+ +L A
Sbjct: 72 TFGAT--NIVLSDY-ELSHLDEELNEKAARLAKQA 103
>UNIPROTKB|F1RHM1 [details] [associations]
symbol:MTR "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008705 "methionine synthase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0031419 "cobalamin
binding" evidence=IEA] [GO:0042558 "pteridine-containing compound
metabolic process" evidence=IEA] [GO:0008898 "homocysteine
S-methyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000489 InterPro:IPR003726
InterPro:IPR003759 InterPro:IPR004223 InterPro:IPR006158
InterPro:IPR011005 InterPro:IPR011822 Pfam:PF00809 Pfam:PF02310
Pfam:PF02574 Pfam:PF02607 Pfam:PF02965 PIRSF:PIRSF000381
PROSITE:PS50970 PROSITE:PS50972 PROSITE:PS50974 PROSITE:PS51332
PROSITE:PS51337 SMART:SM01018 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282
GO:GO:0031419 Gene3D:3.20.20.20 SUPFAM:SSF51717 GO:GO:0042558
Gene3D:3.40.50.280 SUPFAM:SSF52242 GO:GO:0008705
Gene3D:1.10.1240.10 Gene3D:3.10.196.10 PANTHER:PTHR21091:SF9
SUPFAM:SSF56507 SUPFAM:SSF47644 TIGRFAMs:TIGR02082
GeneTree:ENSGT00420000029824 OMA:VRKEFWG EMBL:CU467009
EMBL:CU468604 Ensembl:ENSSSCT00000011105 Uniprot:F1RHM1
Length = 1264
Score = 136 (52.9 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 69/308 (22%), Positives = 126/308 (40%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD-------GH--PLWSS--VYLTTEPEACVETHRDFIRA 54
++ +LDG + + RH + + D H PL + + T+P+ + H+D++ A
Sbjct: 29 RIMVLDGGMGTMIQRHKLSEDDFRGQEFQDHARPLKGNNDILSITQPDIIYQIHKDYLLA 88
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPDINLNKTFNLL 114
GADII+++ + + N+ + Y + ++K SA +I+L
Sbjct: 89 GADIIETNTFSST--NIAQADYGLEHLAYRMNKC-----SAGVARKAAEEISLQTGIKRF 141
Query: 115 TGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALETI 174
A ++GP L ++T +L+ ++ + L+ GVD L +ETI
Sbjct: 142 V-----AGALGPTNKTLSVSPSVEKPDYRNITFDELVEAYKEQAKGLLDGGVDILLIETI 196
Query: 175 PXXXXXXXXXXXXR-----EFPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQI 228
+ E+ Q ++S + D + T G+ + V S A+P
Sbjct: 197 FDTANAKAALFAVQKLFEEEYAPQPIFISGTIVDKSGRTLSGQTGEAFVISVSHADP--- 253
Query: 229 QAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSF--TSQVSRHT 280
IG+NC +RP + T+ +C T + YPN G+ G + T +
Sbjct: 254 LCIGLNCALGAAEMRP-FIETIGKCT-----TAYVLCYPNAGLPNTFGDYDETPHMMAMH 307
Query: 281 IKD--VDG 286
+KD DG
Sbjct: 308 LKDFATDG 315
Score = 38 (18.4 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 484 IQAIGVNC-VRPSHVSTLVRCIKQSHPTV 511
+ +G C P+H+ + +K P V
Sbjct: 317 VNIVGGCCGTTPAHIREIAEAVKNYKPRV 345
>UNIPROTKB|Q4JIJ3 [details] [associations]
symbol:MTR "Methionine synthase" species:9913 "Bos taurus"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008705 "methionine
synthase activity" evidence=IEA] [GO:0031419 "cobalamin binding"
evidence=IEA] [GO:0042558 "pteridine-containing compound metabolic
process" evidence=IEA] [GO:0008898 "homocysteine
S-methyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000489 InterPro:IPR003726
InterPro:IPR003759 InterPro:IPR004223 InterPro:IPR006158
InterPro:IPR011005 InterPro:IPR011822 Pfam:PF00809 Pfam:PF02310
Pfam:PF02574 Pfam:PF02607 Pfam:PF02965 PIRSF:PIRSF000381
PROSITE:PS50970 PROSITE:PS50972 PROSITE:PS50974 PROSITE:PS51332
PROSITE:PS51337 SMART:SM01018 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 UniPathway:UPA00051 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GO:GO:0031419 Gene3D:3.20.20.20 SUPFAM:SSF51717
GO:GO:0042558 Gene3D:3.40.50.280 SUPFAM:SSF52242 GO:GO:0008705
EMBL:DQ084519 IPI:IPI00711806 RefSeq:NP_001025469.1
UniGene:Bt.47673 HSSP:P13009 ProteinModelPortal:Q4JIJ3 SMR:Q4JIJ3
STRING:Q4JIJ3 PRIDE:Q4JIJ3 GeneID:280869 KEGG:bta:280869 CTD:4548
eggNOG:COG1410 HOGENOM:HOG000251409 HOVERGEN:HBG006347
InParanoid:Q4JIJ3 KO:K00548 OrthoDB:EOG41JZBC NextBio:20805009
Gene3D:1.10.1240.10 Gene3D:3.10.196.10 PANTHER:PTHR21091:SF9
SUPFAM:SSF56507 SUPFAM:SSF47644 TIGRFAMs:TIGR02082 Uniprot:Q4JIJ3
Length = 1265
Score = 135 (52.6 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 71/309 (22%), Positives = 128/309 (41%)
Query: 6 KVKLLDGSFTSQVSRHTIKDVD-------GH--PLWSS--VYLTTEPEACVETHRDFIRA 54
++ +LDG + + RH + + D H PL + + T+P + H++++ A
Sbjct: 29 RIMVLDGGMGTMIQRHKLSEEDFRGQEFKDHARPLKGNNDILSITQPNVIYQIHKEYLLA 88
Query: 55 GADIIQSSCYQANVDNLTKLGYSEQEALDLLHKSVQL-MNSAKDKENQTPDINLNKTFNL 113
GADII+++ + + ++ + Y L H + ++ M SA DI+L
Sbjct: 89 GADIIETNTFSST--SIAQADYG------LEHLAYRMNMCSAGVARKAAEDISLQTGIKR 140
Query: 114 LTGHIETAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 173
A ++GP L ++T +L+ ++ + L+ GVD L +ET
Sbjct: 141 YV-----AGALGPTNKTLSVSPSVERPDYRNITFDELVEAYKEQAKGLLDGGVDILLIET 195
Query: 174 IPXXXXXXXXXXXXR-----EFPGQKAWLSFSCKDDT-HTSHGELISSAVTSCLLANPDQ 227
I + E+ + ++S + D + T G+ + V S A+P
Sbjct: 196 IFDTANAKAALFAVQKLFEEEYVPRPVFISGTIVDKSGRTLSGQTGEAFVISVSHADP-- 253
Query: 228 IQAIGVNC------VRPSHVSTLVRCIKQSHPTVQTIVYPNKGVKLLDGSF--TSQVSRH 279
IG+NC +RP + T+ +C T + YPN G+ G + T V
Sbjct: 254 -LCIGLNCALGAAEMRP-FIETIGKCT-----TAYVLCYPNAGLPNTFGDYDETPHVMAM 306
Query: 280 TIKD--VDG 286
+KD VDG
Sbjct: 307 HLKDFAVDG 315
Score = 38 (18.4 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 484 IQAIGVNC-VRPSHVSTLVRCIKQSHPTV 511
+ +G C P H+ + +K P V
Sbjct: 317 VNIVGGCCGTTPDHIREIAEAVKNCKPRV 345
>UNIPROTKB|O33259 [details] [associations]
symbol:metH "Methionine synthase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000489 InterPro:IPR003726
InterPro:IPR003759 InterPro:IPR004223 InterPro:IPR006158
InterPro:IPR011005 InterPro:IPR011822 Pfam:PF00809 Pfam:PF02310
Pfam:PF02574 Pfam:PF02607 Pfam:PF02965 PIRSF:PIRSF000381
PROSITE:PS50970 PROSITE:PS50972 PROSITE:PS50974 PROSITE:PS51332
PROSITE:PS51337 SMART:SM01018 GO:GO:0005829 GO:GO:0005886
GO:GO:0005618 GenomeReviews:AL123456_GR GO:GO:0046872 GO:GO:0008270
EMBL:BX842578 UniPathway:UPA00051 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GO:GO:0031419 Gene3D:3.20.20.20 SUPFAM:SSF51717
GO:GO:0042558 Gene3D:3.40.50.280 SUPFAM:SSF52242 GO:GO:0008705
eggNOG:COG1410 KO:K00548 Gene3D:1.10.1240.10 Gene3D:3.10.196.10
SUPFAM:SSF56507 SUPFAM:SSF47644 TIGRFAMs:TIGR02082 PIR:G70513
RefSeq:NP_216640.1 RefSeq:YP_006515540.1 ProteinModelPortal:O33259
SMR:O33259 PRIDE:O33259 EnsemblBacteria:EBMYCT00000000678
GeneID:13316931 GeneID:888711 KEGG:mtu:Rv2124c KEGG:mtv:RVBD_2124c
PATRIC:18153284 TubercuList:Rv2124c HOGENOM:HOG000251408
OMA:NGSKAFR ProtClustDB:CLSK872016 Uniprot:O33259
Length = 1192
Score = 87 (35.7 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 25/101 (24%), Positives = 47/101 (46%)
Query: 6 KVKLLDGSFTSQVSRH--TIKDVDGHPLWSSVYLTTEPEACVETHRDFIRAGADIIQSSC 63
+V + DG+ +Q+ T+ D G + + T P+ HR++ AGAD ++++
Sbjct: 20 RVMVGDGAMGTQLQAADLTLDDFRGLEGCNEILNETRPDVLETIHRNYFEAGADAVETNT 79
Query: 64 YQANVDNLTKLGYSEQEALDLLHKSVQLMNSAKDKENQTPD 104
+ N+ NL +++ DL K + D E +PD
Sbjct: 80 FGCNLSNLGDYDIADR-IRDLSQKGTAIARRVAD-ELGSPD 118
Score = 87 (35.7 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 28/105 (26%), Positives = 53/105 (50%)
Query: 468 LISSAVTSCLLA-NPDQIQAIGVNCVR-PSHVSTLVRCIKQSHPTVQTIVYPNKG-GVWD 524
L+ S + + L A P + IG+NC P+ +S +R + + H + V PN G V
Sbjct: 207 LLGSEIGAALTAVEPLGVDMIGLNCATGPAEMSEHLRHLSR-HARIPVSVMPNAGLPVLG 265
Query: 525 SVHMKWLDTEDEYSILHYVPQWLEE-GVNIIGGCCEVTSYEIQQM 568
+ ++ DE + + ++ E G++++GGCC T I+++
Sbjct: 266 AKGAEYPLLPDE--LAEALAGFIAEFGLSLVGGCCGTTPAHIREV 308
>UNIPROTKB|P13009 [details] [associations]
symbol:metH species:83333 "Escherichia coli K-12"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0008705 "methionine
synthase activity" evidence=IEA;IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0042558 "pteridine-containing compound metabolic
process" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
[GO:0031419 "cobalamin binding" evidence=IEA;IDA] [GO:0008898
"homocysteine S-methyltransferase activity" evidence=IEA;IDA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA;IMP]
[GO:0008168 "methyltransferase activity" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] InterPro:IPR000489
InterPro:IPR003726 InterPro:IPR003759 InterPro:IPR004223
InterPro:IPR006158 InterPro:IPR011005 InterPro:IPR011822
Pfam:PF00809 Pfam:PF02310 Pfam:PF02574 Pfam:PF02607 Pfam:PF02965
PIRSF:PIRSF000381 PROSITE:PS50970 PROSITE:PS50972 PROSITE:PS50974
PROSITE:PS51332 PROSITE:PS51337 SMART:SM01018 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0008270 EMBL:U00006
UniPathway:UPA00051 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GO:GO:0031419 Gene3D:3.20.20.20 SUPFAM:SSF51717
GO:GO:0042558 Gene3D:3.40.50.280 SUPFAM:SSF52242 GO:GO:0008705
eggNOG:COG1410 HOGENOM:HOG000251409 KO:K00548 Gene3D:1.10.1240.10
Gene3D:3.10.196.10 PANTHER:PTHR21091:SF9 SUPFAM:SSF56507
SUPFAM:SSF47644 TIGRFAMs:TIGR02082 OMA:VRKEFWG EMBL:X16584
EMBL:J04975 PIR:B65209 RefSeq:NP_418443.1 RefSeq:YP_492162.1
PDB:1BMT PDB:1K7Y PDB:1K98 PDB:1MSK PDB:3BUL PDB:3IV9 PDB:3IVA
PDBsum:1BMT PDBsum:1K7Y PDBsum:1K98 PDBsum:1MSK PDBsum:3BUL
PDBsum:3IV9 PDBsum:3IVA ProteinModelPortal:P13009 SMR:P13009
IntAct:P13009 SWISS-2DPAGE:P13009 PaxDb:P13009 PRIDE:P13009
EnsemblBacteria:EBESCT00000002831 EnsemblBacteria:EBESCT00000018146
GeneID:12934458 GeneID:948522 KEGG:ecj:Y75_p3906 KEGG:eco:b4019
PATRIC:32123567 EchoBASE:EB0582 EcoGene:EG10587
ProtClustDB:PRK09490 BioCyc:EcoCyc:HOMOCYSMETB12-MONOMER
BioCyc:ECOL316407:JW3979-MONOMER
BioCyc:MetaCyc:HOMOCYSMETB12-MONOMER EvolutionaryTrace:P13009
Genevestigator:P13009 Uniprot:P13009
Length = 1227
Score = 126 (49.4 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 69/342 (20%), Positives = 125/342 (36%)
Query: 262 NKGVKLLDGSFTSQVSRHTIKDVD--GHPL--W-------SSVYLTTEPEACVETHRDFI 310
N+ + +LDG + + + + + D G W + + + ++PE H
Sbjct: 13 NERILVLDGGMGTMIQSYRLNEADFRGERFADWPCDLKGNNDLLVLSKPEVIAAIHN--- 69
Query: 311 RGHIETAASIGPYGTVLRDGSEYSGHYVDSMT-EADLIAWHRPNVEALVRAGVDYLALIK 369
+ E A I T + + ++S++ E + A L RA D
Sbjct: 70 -AYFEAGADIIETNTFNSTTIAMADYQMESLSAEINFAA------AKLARACADEWTART 122
Query: 370 PSISSQTAASIGPYGTVLRDGSEYSGHYVDSMTEADLIAWHRPNVEALVRAGVDYLALET 429
P A +GP + + ++T L+A +R + +ALV G D + +ET
Sbjct: 123 PEKPRYVAGVLGPTNRTASISPDVNDPAFRNITFDGLVAAYRESTKALVEGGADLILIET 182
Query: 430 IPXXXXXXXXXXXXR-EFPGQKAWLSFSCKDDTHTSHGELISSAVTSCLLANPDQIQAI- 487
+ + EF L + G +S T + +A+
Sbjct: 183 VFDTLNAKAAVFAVKTEFEALGVELPIMISGTITDASGRTLSGQTTEAFYNSLRHAEALT 242
Query: 488 -GVNC-VRPSHV-------STLVRCIKQSHPTVQTIVYPNKGGVWDSVHMKWLDTEDEYS 538
G+NC + P + S + C +HP PN G +D LD + +
Sbjct: 243 FGLNCALGPDELRQYVQELSRIAECYVTAHPNAGL---PNAFGEYD------LDAD---T 290
Query: 539 ILHYVPQWLEEG-VNIIGGCCEVTSYEIQQMRIMIDEFNTKK 579
+ + +W + G +NI+GGCC T I M ++ +K
Sbjct: 291 MAKQIREWAQAGFLNIVGGCCGTTPQHIAAMSRAVEGLAPRK 332
Score = 45 (20.9 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 550 GVNIIGGCCEVTSYEIQQMRIMI 572
G NI+G + +YEI + +M+
Sbjct: 762 GKNIVGVVLQCNNYEIVDLGVMV 784
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 581 557 0.00098 119 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 616 (65 KB)
Total size of DFA: 337 KB (2163 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:04
No. of threads or processors used: 24
Search cpu time: 44.05u 0.08s 44.13t Elapsed: 00:00:38
Total cpu time: 44.06u 0.08s 44.14t Elapsed: 00:00:42
Start: Thu Aug 15 13:14:08 2013 End: Thu Aug 15 13:14:50 2013