Query psy15814
Match_columns 224
No_of_seqs 137 out of 687
Neff 7.4
Searched_HMMs 13730
Date Fri Aug 16 22:02:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15814.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/15814hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2axti1 f.23.37.1 (I:1-35) Pho 77.7 1.2 8.8E-05 24.0 3.1 27 127-153 2-28 (35)
2 d1zaka2 g.41.2.1 (A:128-158) M 34.4 5.3 0.00038 21.0 0.5 16 17-32 3-20 (31)
3 d1pk6a_ b.22.1.1 (A:) Compleme 9.4 47 0.0034 21.9 1.0 11 7-17 1-11 (133)
4 d2bw3a1 a.270.1.1 (A:79-162) T 8.0 1.7E+02 0.013 18.3 3.3 28 105-132 14-43 (84)
5 d1ei1a1 d.14.1.3 (A:221-392) D 7.2 66 0.0048 23.0 1.0 12 7-18 107-118 (172)
6 d1z1ba1 d.10.1.4 (A:11-59) lam 6.8 54 0.004 18.7 0.3 9 17-25 16-24 (49)
7 d1sg5a1 b.137.1.2 (A:1-86) Inh 6.3 79 0.0058 20.0 1.0 15 197-211 14-28 (86)
8 d2ejna1 a.101.1.1 (A:1-72) All 6.3 1.1E+02 0.0084 18.5 1.6 14 194-207 15-28 (72)
9 d1tzyb_ a.22.1.1 (B:) Histone 5.1 3.2E+02 0.024 17.1 3.6 35 96-130 30-67 (92)
10 d2vv5a3 f.34.1.1 (A:27-112) Me 4.9 3.5E+02 0.025 15.9 3.8 26 89-114 3-29 (86)
No 1
>d2axti1 f.23.37.1 (I:1-35) Photosystem II reaction center protein I, PsbI {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=77.71 E-value=1.2 Score=24.02 Aligned_cols=27 Identities=26% Similarity=0.411 Sum_probs=24.1
Q ss_pred hhhhhhHHHHHhhHHHHHHHHHhhhhh
Q psy15814 127 RITKLVLFEFVNNFMSLFYVAFYIQDL 153 (224)
Q Consensus 127 li~K~f~f~fvn~~~~LfyiAF~~~~~ 153 (224)
+++|.+....+..|.++|.-+|...|-
T Consensus 2 ltLKi~Vy~vV~fFv~lFiFGFLSnDP 28 (35)
T d2axti1 2 ETLKITVYIVVTFFVLLFVFGFLSGDP 28 (35)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred ceEEEehhhHHHHHHHHHHHhhccCCC
Confidence 689999999999999999999987764
No 2
>d1zaka2 g.41.2.1 (A:128-158) Microbial and mitochondrial ADK, insert "zinc finger" domain {Maize (Zea mays) [TaxId: 4577]}
Probab=34.43 E-value=5.3 Score=21.04 Aligned_cols=16 Identities=38% Similarity=0.353 Sum_probs=10.8
Q ss_pred CCcccccccc--cCCccc
Q psy15814 17 GEDTVTGKMQ--PQYPAW 32 (224)
Q Consensus 17 ~~~piTg~~e--~~~p~~ 32 (224)
|.||+||+.- .|.|+-
T Consensus 3 R~DP~TG~iYH~~f~ppp 20 (31)
T d1zaka2 3 RLDPVTGKIYHLKYSPPE 20 (31)
T ss_dssp EECTTTCCEEESSSSCCC
T ss_pred cCCCCCCcEeEEecCCCC
Confidence 6899999952 344544
No 3
>d1pk6a_ b.22.1.1 (A:) Complement c1q globular head, A chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.35 E-value=47 Score=21.90 Aligned_cols=11 Identities=36% Similarity=0.697 Sum_probs=8.4
Q ss_pred CCCCcccccCC
Q psy15814 7 TPRPTFHGKMG 17 (224)
Q Consensus 7 ~~Rp~f~g~~~ 17 (224)
+|||.|.+...
T Consensus 1 ~p~PAF~a~~~ 11 (133)
T d1pk6a_ 1 QPRPAFSAIRR 11 (133)
T ss_dssp CCCCEEEEECS
T ss_pred CCCceEEEEeC
Confidence 57999998643
No 4
>d2bw3a1 a.270.1.1 (A:79-162) Transposase Hermes, dimerisation domain {House fly (Musca domestica) [TaxId: 7370]}
Probab=8.02 E-value=1.7e+02 Score=18.26 Aligned_cols=28 Identities=14% Similarity=0.310 Sum_probs=21.6
Q ss_pred HHHHHHHHHh--hhccccccccchhhhhhh
Q psy15814 105 RELANFLTEW--ENHRTQSQFDRYRITKLV 132 (224)
Q Consensus 105 ~~~a~~Lt~~--Enhrt~~~ye~sli~K~f 132 (224)
.+++...++| +|.|.-+--++|-..|+.
T Consensus 14 ~k~~~a~~qW~V~nCRp~siv~dsGlkklv 43 (84)
T d2bw3a1 14 KEAIEKCAQWVVRDCRPFSAVSGSGFIDMI 43 (84)
T ss_dssp HHHHHHHHHHHHHTTCCGGGGGCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcccchhccccHHHHH
Confidence 3455566666 899999999999888775
No 5
>d1ei1a1 d.14.1.3 (A:221-392) DNA gyrase B {Escherichia coli [TaxId: 562]}
Probab=7.18 E-value=66 Score=23.00 Aligned_cols=12 Identities=25% Similarity=0.686 Sum_probs=8.7
Q ss_pred CCCCcccccCCC
Q psy15814 7 TPRPTFHGKMGE 18 (224)
Q Consensus 7 ~~Rp~f~g~~~~ 18 (224)
-+.|||+|+.+.
T Consensus 107 i~~PqFeGQTK~ 118 (172)
T d1ei1a1 107 VPDPKFSSQTKD 118 (172)
T ss_dssp CSSCCBSSTTCC
T ss_pred ccCcccCccccc
Confidence 467889887653
No 6
>d1z1ba1 d.10.1.4 (A:11-59) lambda integrase N-terminal domain {Bacteriophage lambda [TaxId: 10710]}
Probab=6.77 E-value=54 Score=18.70 Aligned_cols=9 Identities=44% Similarity=0.353 Sum_probs=7.6
Q ss_pred CCccccccc
Q psy15814 17 GEDTVTGKM 25 (224)
Q Consensus 17 ~~~piTg~~ 25 (224)
-+||+||+.
T Consensus 16 yr~P~tGk~ 24 (49)
T d1z1ba1 16 YRDPRTGKE 24 (49)
T ss_dssp EECTTTCCE
T ss_pred eecCCCCce
Confidence 489999985
No 7
>d1sg5a1 b.137.1.2 (A:1-86) Inhibitor of Rho Rof {Escherichia coli [TaxId: 562]}
Probab=6.35 E-value=79 Score=20.02 Aligned_cols=15 Identities=33% Similarity=0.195 Sum_probs=12.1
Q ss_pred hhHHHHHHHHhceee
Q psy15814 197 YDDYLELFIQFGYVY 211 (224)
Q Consensus 197 ~~dy~E~~iQfG~vt 211 (224)
.-||+|++-++||-.
T Consensus 14 ~yDyLEiaC~~~~~l 28 (86)
T d1sg5a1 14 DYDNLELACQHHLML 28 (86)
T ss_dssp SHHHHHHHHTTTTCE
T ss_pred hhhHHHHHHHcCCcE
Confidence 358999999999853
No 8
>d2ejna1 a.101.1.1 (A:1-72) Allergen Fel d I-A chain {Cat (Felis catus) [TaxId: 9685]}
Probab=6.27 E-value=1.1e+02 Score=18.54 Aligned_cols=14 Identities=50% Similarity=0.824 Sum_probs=12.6
Q ss_pred cCchhHHHHHHHHh
Q psy15814 194 TGTYDDYLELFIQF 207 (224)
Q Consensus 194 ~~~~~dy~E~~iQf 207 (224)
+|+.+||.|-+=||
T Consensus 15 ~GT~eeYveyvkqY 28 (72)
T d2ejna1 15 TGTPDEYVEQVAQY 28 (72)
T ss_dssp HSCHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHh
Confidence 69999999998887
No 9
>d1tzyb_ a.22.1.1 (B:) Histone H2B {Chicken (Gallus gallus), erythrocytes [TaxId: 9031]}
Probab=5.10 E-value=3.2e+02 Score=17.10 Aligned_cols=35 Identities=11% Similarity=0.205 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHH---HHHHhhhccccccccchhhhh
Q psy15814 96 LVYLMNMYYRELAN---FLTEWENHRTQSQFDRYRITK 130 (224)
Q Consensus 96 ~I~~l~~iY~~~a~---~Lt~~Enhrt~~~ye~sli~K 130 (224)
.-.++|.++.++|. .|.++.+++|-+.-|-.-.++
T Consensus 30 mnsfvndiferIa~EA~~La~~~kr~TitsreIqtAvr 67 (92)
T d1tzyb_ 30 MNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVR 67 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHH
Confidence 34455667777776 899999988887765444333
No 10
>d2vv5a3 f.34.1.1 (A:27-112) Mechanosensitive channel protein MscS (YggB), transmembrane region {Escherichia coli [TaxId: 562]}
Probab=4.92 E-value=3.5e+02 Score=15.91 Aligned_cols=26 Identities=12% Similarity=0.198 Sum_probs=11.1
Q ss_pred chhHHHHHHHHHHH-HHHHHHHHHHHh
Q psy15814 89 PSTLYAALVYLMNM-YYRELANFLTEW 114 (224)
Q Consensus 89 ~svl~~v~I~~l~~-iY~~~a~~Lt~~ 114 (224)
+.++..+.+..... +.+.+.+.+.++
T Consensus 3 ~~il~~l~il~i~~~i~~~i~~~~~~~ 29 (86)
T d2vv5a3 3 VNIVAALAIIIVGLIIARMISNAVNRL 29 (86)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444333 334444444444
Done!