Query psy15815
Match_columns 117
No_of_seqs 104 out of 475
Neff 6.8
Searched_HMMs 13730
Date Fri Aug 16 22:03:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15815.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/15815hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1v6ga2 g.39.1.3 (A:42-81) Act 9.7 34 0.0025 16.9 0.2 11 22-32 3-13 (40)
2 d1rrqa1 a.96.1.2 (A:9-229) Cat 9.5 1.5E+02 0.011 19.1 3.7 35 13-48 4-39 (221)
3 d1mbya_ d.223.1.1 (A:) Serine/ 8.7 79 0.0057 17.7 1.6 11 94-104 54-64 (75)
4 d2piaa2 c.25.1.2 (A:104-223) P 8.0 32 0.0023 19.6 -0.4 28 1-28 20-47 (120)
5 d1z0pa1 a.2.18.1 (A:1-77) Hypo 7.5 74 0.0054 17.8 1.1 12 12-23 48-59 (77)
6 d1kqfc_ f.21.1.1 (C:) Formate 6.7 2.9E+02 0.021 17.0 4.8 14 71-84 160-173 (216)
7 d2f66c1 a.2.17.3 (C:142-206) V 6.4 1.2E+02 0.0089 16.3 1.6 14 4-17 40-53 (65)
8 d1tvca2 c.25.1.2 (A:111-251) M 6.3 76 0.0055 18.6 0.8 42 1-48 20-62 (141)
9 d1n1ea1 a.100.1.6 (A:198-357) 5.8 1.8E+02 0.013 17.7 2.5 34 2-37 122-156 (160)
10 d1el0a_ d.9.1.1 (A:) CC chemok 5.7 1.5E+02 0.011 15.9 1.9 10 96-105 56-65 (74)
No 1
>d1v6ga2 g.39.1.3 (A:42-81) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.71 E-value=34 Score=16.95 Aligned_cols=11 Identities=18% Similarity=0.594 Sum_probs=7.5
Q ss_pred hhhhcCCCccc
Q psy15815 22 CCLYQRPIARR 32 (117)
Q Consensus 22 ~~~~rRP~p~~ 32 (117)
|..+|+|+|-.
T Consensus 3 C~vCr~pFP~G 13 (40)
T d1v6ga2 3 CAVCRLPFPPG 13 (40)
T ss_dssp CSSSCCCCCSS
T ss_pred ccccCCCCCCC
Confidence 45678888754
No 2
>d1rrqa1 a.96.1.2 (A:9-229) Catalytic domain of MutY {Bacillus stearothermophilus [TaxId: 1422]}
Probab=9.48 E-value=1.5e+02 Score=19.15 Aligned_cols=35 Identities=14% Similarity=0.219 Sum_probs=23.9
Q ss_pred HHhhhHhhhhhhhcCCCccccCChhhHHHHH-HHHHH
Q psy15815 13 EVRSDAFKLCCLYQRPIARRVKNIGAWQVLF-LFVVF 48 (117)
Q Consensus 13 Eir~Da~Kl~~~~rRP~p~~~~~IG~W~~il-~~i~~ 48 (117)
+++-+.++.....+|++|.+... .+|..+. +.|+.
T Consensus 4 ~~~~~l~~wy~~~~r~lpWr~~~-dp~~vLV~~iLsq 39 (221)
T d1rrqa1 4 EFQRDLLDWFARERRDLPWRKDR-DPYKVWVSEVMLQ 39 (221)
T ss_dssp HHHHHHHHHHHHHCCCCGGGSCC-CHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCCCCCCCC-CHHHHHHHHHHHh
Confidence 46667777777889999987554 6676544 44544
No 3
>d1mbya_ d.223.1.1 (A:) Serine/threonine-protein kinase Sak C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=8.66 E-value=79 Score=17.75 Aligned_cols=11 Identities=18% Similarity=0.552 Sum_probs=7.8
Q ss_pred CCCHHHHHHHH
Q psy15815 94 DKPHWVRVALA 104 (117)
Q Consensus 94 d~P~~V~~~~~ 104 (117)
+.|++|++++.
T Consensus 54 ~LP~~vreKL~ 64 (75)
T d1mbya_ 54 KLPEYIKQKLQ 64 (75)
T ss_dssp CCCHHHHHHHT
T ss_pred cccHHHHHHHh
Confidence 57888887653
No 4
>d2piaa2 c.25.1.2 (A:104-223) Phthalate dioxygenase reductase {Pseudomonas cepacia, db01 [TaxId: 292]}
Probab=8.03 E-value=32 Score=19.61 Aligned_cols=28 Identities=14% Similarity=0.339 Sum_probs=15.5
Q ss_pred ChhHHHHHHHHHHHhhhHhhhhhhhcCC
Q psy15815 1 MAAFWALINNMLEVRSDAFKLCCLYQRP 28 (117)
Q Consensus 1 Lapl~alinN~iEir~Da~Kl~~~~rRP 28 (117)
+||+.+++.-..+-+..-..+....|+|
T Consensus 20 iaP~~s~~~~l~~~~~~~~~l~~~~r~~ 47 (120)
T d2piaa2 20 ITPMLSMARQLRAEGLRSFRLYYLTRDP 47 (120)
T ss_dssp HHHHHHHHHHHHHHCSSEEEEEEEESCG
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeeCCH
Confidence 4899999887655432223333333443
No 5
>d1z0pa1 a.2.18.1 (A:1-77) Hypothetical protein SPy1572 {Streptococcus pyogenes [TaxId: 1314]}
Probab=7.50 E-value=74 Score=17.78 Aligned_cols=12 Identities=25% Similarity=0.434 Sum_probs=9.7
Q ss_pred HHHhhhHhhhhh
Q psy15815 12 LEVRSDAFKLCC 23 (117)
Q Consensus 12 iEir~Da~Kl~~ 23 (117)
-|-|.||++++.
T Consensus 48 YEsklDAY~Fl~ 59 (77)
T d1z0pa1 48 YESKLDAYEFLL 59 (77)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHhhhHHHHHH
Confidence 478899999874
No 6
>d1kqfc_ f.21.1.1 (C:) Formate dehydrogenase N, cytochrome (gamma) subunit {Escherichia coli [TaxId: 562]}
Probab=6.73 E-value=2.9e+02 Score=17.00 Aligned_cols=14 Identities=7% Similarity=0.527 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHH
Q psy15815 71 LFLFVVFEHILLLL 84 (117)
Q Consensus 71 l~~~i~~EH~~~~l 84 (117)
+...+++-|+++.+
T Consensus 160 l~~~~vi~Hvy~a~ 173 (216)
T d1kqfc_ 160 ILIHAILIHMYMAF 173 (216)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 45666678998876
No 7
>d2f66c1 a.2.17.3 (C:142-206) Vacuolar protein sorting-associated protein 37, VPS37 (SRN2) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=6.38 E-value=1.2e+02 Score=16.32 Aligned_cols=14 Identities=29% Similarity=0.570 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHhhh
Q psy15815 4 FWALINNMLEVRSD 17 (117)
Q Consensus 4 l~alinN~iEir~D 17 (117)
+=+|++|++.+|+.
T Consensus 40 lD~Fi~qYl~~RTe 53 (65)
T d2f66c1 40 LDQFIKNYLDIRTQ 53 (65)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44789999999975
No 8
>d1tvca2 c.25.1.2 (A:111-251) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]}
Probab=6.31 E-value=76 Score=18.62 Aligned_cols=42 Identities=7% Similarity=0.020 Sum_probs=24.0
Q ss_pred ChhHHHHHHHHHHHhhhH-hhhhhhhcCCCccccCChhhHHHHHHHHHH
Q psy15815 1 MAAFWALINNMLEVRSDA-FKLCCLYQRPIARRVKNIGAWQVLFLFVVF 48 (117)
Q Consensus 1 Lapl~alinN~iEir~Da-~Kl~~~~rRP~p~~~~~IG~W~~il~~i~~ 48 (117)
+||+.+++..+.+-..+. ..+....|.+ +++ .+.+-++-++-
T Consensus 20 ItP~~s~l~~~~~~~~~~~v~l~~~~r~~-----~d~-~~~~el~~l~~ 62 (141)
T d1tvca2 20 LAPVVSMVRQMQEWTAPNETRIYFGVNTE-----PEL-FYIDELKSLER 62 (141)
T ss_dssp THHHHHHHHHHHHHTCCSCEEEEEECSSS-----TTC-CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCceEEEeecccc-----hhh-hhHHHHHHHHh
Confidence 489999998887765432 3333444444 344 34555555543
No 9
>d1n1ea1 a.100.1.6 (A:198-357) Glycerol-3-phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}
Probab=5.78 E-value=1.8e+02 Score=17.74 Aligned_cols=34 Identities=6% Similarity=0.031 Sum_probs=24.0
Q ss_pred hhHHHHHHHHHHHhhhHhhhh-hhhcCCCccccCChh
Q psy15815 2 AAFWALINNMLEVRSDAFKLC-CLYQRPIARRVKNIG 37 (117)
Q Consensus 2 apl~alinN~iEir~Da~Kl~-~~~rRP~p~~~~~IG 37 (117)
.|++.-+.+++.=..|.-..+ ....||. +.++++
T Consensus 122 ~Pi~~~vy~Il~~~~~p~~~i~~Lm~r~~--k~E~~~ 156 (160)
T d1n1ea1 122 MPLCHQIYEIVYKKKNPRDALADLLSCGL--QDEGLP 156 (160)
T ss_dssp CHHHHHHHHHHHSCCCHHHHHHHHTTSCS--CBCCCC
T ss_pred CcHHHHHHHHHhCcCCHHHHHHHHHCCCC--CCCCCC
Confidence 488888889988888876655 4567877 444443
No 10
>d1el0a_ d.9.1.1 (A:) CC chemokine I-309 {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.72 E-value=1.5e+02 Score=15.94 Aligned_cols=10 Identities=20% Similarity=0.305 Sum_probs=5.7
Q ss_pred CHHHHHHHHH
Q psy15815 96 PHWVRVALAK 105 (117)
Q Consensus 96 P~~V~~~~~r 105 (117)
-.||+..+++
T Consensus 56 ~~WVq~~i~~ 65 (74)
T d1el0a_ 56 VGWVQRHRKM 65 (74)
T ss_dssp SSHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 3466666654
Done!