BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15818
(225 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 220 bits (560), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 142/201 (70%), Gaps = 3/201 (1%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LK +A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 111
Query: 85 SFLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
+L++ R + YN H L+S+DL S YQVARGM++L+S+ IHRDLAARNVL
Sbjct: 112 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 171
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ E++ K+ADFG ARD+ Y++ + GRLP++WMAPE+L+D I++ +SD+WSFGVL+
Sbjct: 172 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 231
Query: 202 WEIVTLGSTPYPGMAAAEVMK 222
WEI TLG +PYPG+ E+ K
Sbjct: 232 WEIFTLGGSPYPGVPVEELFK 252
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 220 bits (560), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 142/201 (70%), Gaps = 3/201 (1%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LK +A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 85 SFLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
+L++ R + YN H L+S+DL S YQVARGM++L+S+ IHRDLAARNVL
Sbjct: 123 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ E++ K+ADFG ARD+ Y++ + GRLP++WMAPE+L+D I++ +SD+WSFGVL+
Sbjct: 183 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 242
Query: 202 WEIVTLGSTPYPGMAAAEVMK 222
WEI TLG +PYPG+ E+ K
Sbjct: 243 WEIFTLGGSPYPGVPVEELFK 263
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 220 bits (560), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 142/201 (70%), Gaps = 3/201 (1%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LK +A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 115
Query: 85 SFLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
+L++ R + YN H L+S+DL S YQVARGM++L+S+ IHRDLAARNVL
Sbjct: 116 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 175
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ E++ K+ADFG ARD+ Y++ + GRLP++WMAPE+L+D I++ +SD+WSFGVL+
Sbjct: 176 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 235
Query: 202 WEIVTLGSTPYPGMAAAEVMK 222
WEI TLG +PYPG+ E+ K
Sbjct: 236 WEIFTLGGSPYPGVPVEELFK 256
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 220 bits (560), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 142/201 (70%), Gaps = 3/201 (1%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LK +A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 114
Query: 85 SFLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
+L++ R + YN H L+S+DL S YQVARGM++L+S+ IHRDLAARNVL
Sbjct: 115 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 174
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ E++ K+ADFG ARD+ Y++ + GRLP++WMAPE+L+D I++ +SD+WSFGVL+
Sbjct: 175 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 234
Query: 202 WEIVTLGSTPYPGMAAAEVMK 222
WEI TLG +PYPG+ E+ K
Sbjct: 235 WEIFTLGGSPYPGVPVEELFK 255
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 219 bits (559), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 142/201 (70%), Gaps = 3/201 (1%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LK +A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 163
Query: 85 SFLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
+L++ R + YN H L+S+DL S YQVARGM++L+S+ IHRDLAARNVL
Sbjct: 164 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 223
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ E++ K+ADFG ARD+ Y++ + GRLP++WMAPE+L+D I++ +SD+WSFGVL+
Sbjct: 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 283
Query: 202 WEIVTLGSTPYPGMAAAEVMK 222
WEI TLG +PYPG+ E+ K
Sbjct: 284 WEIFTLGGSPYPGVPVEELFK 304
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 219 bits (558), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 142/201 (70%), Gaps = 3/201 (1%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LK +A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 85 SFLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
+L++ R + YN H L+S+DL S YQVARGM++L+S+ IHRDLAARNVL
Sbjct: 123 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ E++ K+ADFG ARD+ Y++ + GRLP++WMAPE+L+D I++ +SD+WSFGVL+
Sbjct: 183 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 242
Query: 202 WEIVTLGSTPYPGMAAAEVMK 222
WEI TLG +PYPG+ E+ K
Sbjct: 243 WEIFTLGGSPYPGVPVEELFK 263
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 219 bits (557), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 142/201 (70%), Gaps = 3/201 (1%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LK +A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 107
Query: 85 SFLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
+L++ R + YN H L+S+DL S YQVARGM++L+S+ IHRDLAARNVL
Sbjct: 108 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 167
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ E++ K+ADFG ARD+ Y++ + GRLP++WMAPE+L+D I++ +SD+WSFGVL+
Sbjct: 168 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 227
Query: 202 WEIVTLGSTPYPGMAAAEVMK 222
WEI TLG +PYPG+ E+ K
Sbjct: 228 WEIFTLGGSPYPGVPVEELFK 248
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 218 bits (554), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 141/201 (70%), Gaps = 3/201 (1%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LK +A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 85 SFLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
+L++ + YN H L+S+DL S YQVARGM++L+S+ IHRDLAARNVL
Sbjct: 123 EYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ E++ K+ADFG ARD+ Y++ + GRLP++WMAPE+L+D I++ +SD+WSFGVL+
Sbjct: 183 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 242
Query: 202 WEIVTLGSTPYPGMAAAEVMK 222
WEI TLG +PYPG+ E+ K
Sbjct: 243 WEIFTLGGSPYPGVPVEELFK 263
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 215 bits (547), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 141/201 (70%), Gaps = 3/201 (1%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LK +A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 85 SFLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
+L++ R + +N H L+S+DL S YQVARGM++L+S+ IHRDLAARNVL
Sbjct: 123 EYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ E++ K+ADFG ARD+ ++ + GRLP++WMAPE+L+D I++ +SD+WSFGVL+
Sbjct: 183 VTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 242
Query: 202 WEIVTLGSTPYPGMAAAEVMK 222
WEI TLG +PYPG+ E+ K
Sbjct: 243 WEIFTLGGSPYPGVPVEELFK 263
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 213 bits (543), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 99/224 (44%), Positives = 149/224 (66%), Gaps = 4/224 (1%)
Query: 3 CFSVEVRKHPMSPERGREGPCI-VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL 61
CF V + ++ + + VAVK LK++A E++ DL+ E+ +MK + H N++ L
Sbjct: 36 CFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL 95
Query: 62 LGCCTEKEPFFVIMEYVPYGKLQSFLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQV 118
LG CT+ P +VI+EY G L+ +LR+ R + Y+ +T +DL S YQ+
Sbjct: 96 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL 155
Query: 119 ARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWM 178
ARGM++L+S+ IHRDLAARNVL+ EN+ K+ADFG ARD+ Y++ + GRLP++WM
Sbjct: 156 ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM 215
Query: 179 APESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMK 222
APE+L+D +++ +SD+WSFGVL+WEI TLG +PYPG+ E+ K
Sbjct: 216 APEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 259
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 213 bits (543), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 99/224 (44%), Positives = 149/224 (66%), Gaps = 4/224 (1%)
Query: 3 CFSVEVRKHPMSPERGREGPCI-VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL 61
CF V + ++ + + VAVK LK++A E++ DL+ E+ +MK + H N++ L
Sbjct: 93 CFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL 152
Query: 62 LGCCTEKEPFFVIMEYVPYGKLQSFLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQV 118
LG CT+ P +VI+EY G L+ +LR+ R + Y+ +T +DL S YQ+
Sbjct: 153 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL 212
Query: 119 ARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWM 178
ARGM++L+S+ IHRDLAARNVL+ EN+ K+ADFG ARD+ Y++ + GRLP++WM
Sbjct: 213 ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM 272
Query: 179 APESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMK 222
APE+L+D +++ +SD+WSFGVL+WEI TLG +PYPG+ E+ K
Sbjct: 273 APEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 316
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 213 bits (543), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 99/224 (44%), Positives = 149/224 (66%), Gaps = 4/224 (1%)
Query: 3 CFSVEVRKHPMSPERGREGPCI-VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL 61
CF V + ++ + + VAVK LK++A E++ DL+ E+ +MK + H N++ L
Sbjct: 39 CFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL 98
Query: 62 LGCCTEKEPFFVIMEYVPYGKLQSFLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQV 118
LG CT+ P +VI+EY G L+ +LR+ R + Y+ +T +DL S YQ+
Sbjct: 99 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL 158
Query: 119 ARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWM 178
ARGM++L+S+ IHRDLAARNVL+ EN+ K+ADFG ARD+ Y++ + GRLP++WM
Sbjct: 159 ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM 218
Query: 179 APESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMK 222
APE+L+D +++ +SD+WSFGVL+WEI TLG +PYPG+ E+ K
Sbjct: 219 APEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 262
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 213 bits (542), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 141/201 (70%), Gaps = 3/201 (1%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LK++A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLR 129
Query: 85 SFLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
+LR+ R + Y+ +T +DL S YQ+ARGM++L+S+ IHRDLAARNVL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ EN+ K+ADFG ARD+ Y++ + GRLP++WMAPE+L+D +++ +SD+WSFGVL+
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 202 WEIVTLGSTPYPGMAAAEVMK 222
WEI TLG +PYPG+ E+ K
Sbjct: 250 WEIFTLGGSPYPGIPVEELFK 270
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 213 bits (542), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 141/201 (70%), Gaps = 3/201 (1%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LK++A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLR 129
Query: 85 SFLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
+LR+ R + Y+ +T +DL S YQ+ARGM++L+S+ IHRDLAARNVL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ EN+ K+ADFG ARD+ Y++ + GRLP++WMAPE+L+D +++ +SD+WSFGVL+
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 202 WEIVTLGSTPYPGMAAAEVMK 222
WEI TLG +PYPG+ E+ K
Sbjct: 250 WEIFTLGGSPYPGIPVEELFK 270
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 212 bits (540), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 140/201 (69%), Gaps = 3/201 (1%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LK++A E + DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+
Sbjct: 70 VAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 85 SFLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
+LR+ R + Y+ +T +DL S YQ+ARGM++L+S+ IHRDLAARNVL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ EN+ K+ADFG ARD+ Y++ + GRLP++WMAPE+L+D +++ +SD+WSFGVL+
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 202 WEIVTLGSTPYPGMAAAEVMK 222
WEI TLG +PYPG+ E+ K
Sbjct: 250 WEIFTLGGSPYPGIPVEELFK 270
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 212 bits (540), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 140/201 (69%), Gaps = 3/201 (1%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LK++A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 85 SFLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
+LR+ R + Y+ +T +DL S YQ+ARGM++L+S+ IHRDLAARNVL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ EN+ K+ADFG ARD+ Y+ + GRLP++WMAPE+L+D +++ +SD+WSFGVL+
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 202 WEIVTLGSTPYPGMAAAEVMK 222
WEI TLG +PYPG+ E+ K
Sbjct: 250 WEIFTLGGSPYPGIPVEELFK 270
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 212 bits (539), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 141/201 (70%), Gaps = 3/201 (1%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LK++A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 85 SFLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
+LR+ R + Y+ +T +DL S YQ+ARGM++L+S+ IHRDLAARNVL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ EN+ ++ADFG ARD+ Y++ + GRLP++WMAPE+L+D +++ +SD+WSFGVL+
Sbjct: 190 VTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 202 WEIVTLGSTPYPGMAAAEVMK 222
WEI TLG +PYPG+ E+ K
Sbjct: 250 WEIFTLGGSPYPGIPVEELFK 270
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 211 bits (538), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 148/224 (66%), Gaps = 4/224 (1%)
Query: 3 CFSVEVRKHPMSPERGREGPCI-VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL 61
CF V + ++ + + VAVK LK++A E++ DL+ E+ +MK + H N++ L
Sbjct: 34 CFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL 93
Query: 62 LGCCTEKEPFFVIMEYVPYGKLQSFLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQV 118
LG CT+ P +VI+EY G L+ +LR+ R + Y+ +T +DL S YQ+
Sbjct: 94 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL 153
Query: 119 ARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWM 178
ARGM++L+S+ IHRDL ARNVL+ EN+ K+ADFG ARD+ Y++ + GRLP++WM
Sbjct: 154 ARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM 213
Query: 179 APESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMK 222
APE+L+D +++ +SD+WSFGVL+WEI TLG +PYPG+ E+ K
Sbjct: 214 APEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 257
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 211 bits (537), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 140/201 (69%), Gaps = 3/201 (1%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LK++A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+ Y G L+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLR 129
Query: 85 SFLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
+LR+ R + Y+ +T +DL S YQ+ARGM++L+S+ IHRDLAARNVL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ EN+ K+ADFG ARD+ Y++ + GRLP++WMAPE+L+D +++ +SD+WSFGVL+
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 202 WEIVTLGSTPYPGMAAAEVMK 222
WEI TLG +PYPG+ E+ K
Sbjct: 250 WEIFTLGGSPYPGIPVEELFK 270
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 211 bits (536), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 140/201 (69%), Gaps = 3/201 (1%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LK++A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 85 SFLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
+LR+ R + Y+ +T +DL S YQ+ARGM++L+S+ IHRDLAARNVL
Sbjct: 130 EYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ EN+ K+ADFG ARD+ ++ + GRLP++WMAPE+L+D +++ +SD+WSFGVL+
Sbjct: 190 VTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 202 WEIVTLGSTPYPGMAAAEVMK 222
WEI TLG +PYPG+ E+ K
Sbjct: 250 WEIFTLGGSPYPGIPVEELFK 270
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 210 bits (535), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 140/201 (69%), Gaps = 3/201 (1%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LK++A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+ Y G L+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLR 129
Query: 85 SFLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
+LR+ R + Y+ +T +DL S YQ+ARGM++L+S+ IHRDLAARNVL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ EN+ K+ADFG ARD+ Y++ + GRLP++WMAPE+L+D +++ +SD+WSFGVL+
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 202 WEIVTLGSTPYPGMAAAEVMK 222
WEI TLG +PYPG+ E+ K
Sbjct: 250 WEIFTLGGSPYPGIPVEELFK 270
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 210 bits (535), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 140/201 (69%), Gaps = 3/201 (1%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LK++A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 85 SFLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
+LR+ R + Y+ +T +DL S YQ+ARGM++L+S+ IHRDLAARNVL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ EN+ K+ADFG ARD+ ++ + GRLP++WMAPE+L+D +++ +SD+WSFGVL+
Sbjct: 190 VTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 202 WEIVTLGSTPYPGMAAAEVMK 222
WEI TLG +PYPG+ E+ K
Sbjct: 250 WEIFTLGGSPYPGIPVEELFK 270
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 208 bits (530), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 140/210 (66%), Gaps = 12/210 (5%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
+GR G VAVK LKENA E DLL E V+K ++ HP+V++L G C++ P +I+E
Sbjct: 48 KGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN-HPHVIKLYGACSQDGPLLLIVE 106
Query: 77 YVPYGKLQSFLRSSR--AQRYYNNM---------HGKSNSLTSRDLTSFCYQVARGMQFL 125
Y YG L+ FLR SR Y + H +LT DL SF +Q+++GMQ+L
Sbjct: 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL 166
Query: 126 SSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYD 185
+ ++HRDLAARN+L+ E K++DFG +RD+ Y ++S+GR+P++WMA ESL+D
Sbjct: 167 AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFD 226
Query: 186 NIFSVKSDIWSFGVLIWEIVTLGSTPYPGM 215
+I++ +SD+WSFGVL+WEIVTLG PYPG+
Sbjct: 227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 206 bits (525), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 130/202 (64%), Gaps = 4/202 (1%)
Query: 18 GREGPCI-VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
G+E + VAVK LK A E+ L+ EL +M L H N+V LLG CT P VI E
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 77 YVPYGKLQSFLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHR 133
Y YG L +FLR R + YN H L+SRDL F QVA+GM FL+S+ IHR
Sbjct: 131 YCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHR 190
Query: 134 DLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSD 193
D+AARNVL+ H K+ DFG ARD+M S Y K RLP++WMAPES++D +++V+SD
Sbjct: 191 DVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSD 250
Query: 194 IWSFGVLIWEIVTLGSTPYPGM 215
+WS+G+L+WEI +LG PYPG+
Sbjct: 251 VWSYGILLWEIFSLGLNPYPGI 272
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 206 bits (523), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 139/210 (66%), Gaps = 12/210 (5%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
+GR G VAVK LKENA E DLL E V+K ++ HP+V++L G C++ P +I+E
Sbjct: 48 KGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN-HPHVIKLYGACSQDGPLLLIVE 106
Query: 77 YVPYGKLQSFLRSSR--AQRYYNNM---------HGKSNSLTSRDLTSFCYQVARGMQFL 125
Y YG L+ FLR SR Y + H +LT DL SF +Q+++GMQ+L
Sbjct: 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL 166
Query: 126 SSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYD 185
+ ++HRDLAARN+L+ E K++DFG +RD+ ++S+GR+P++WMA ESL+D
Sbjct: 167 AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFD 226
Query: 186 NIFSVKSDIWSFGVLIWEIVTLGSTPYPGM 215
+I++ +SD+WSFGVL+WEIVTLG PYPG+
Sbjct: 227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 205 bits (522), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 139/210 (66%), Gaps = 12/210 (5%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
+GR G VAVK LKENA E DLL E V+K ++ HP+V++L G C++ P +I+E
Sbjct: 48 KGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN-HPHVIKLYGACSQDGPLLLIVE 106
Query: 77 YVPYGKLQSFLRSSR--AQRYYNNM---------HGKSNSLTSRDLTSFCYQVARGMQFL 125
Y YG L+ FLR SR Y + H +LT DL SF +Q+++GMQ+L
Sbjct: 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL 166
Query: 126 SSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYD 185
+ ++HRDLAARN+L+ E K++DFG +RD+ ++S+GR+P++WMA ESL+D
Sbjct: 167 AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFD 226
Query: 186 NIFSVKSDIWSFGVLIWEIVTLGSTPYPGM 215
+I++ +SD+WSFGVL+WEIVTLG PYPG+
Sbjct: 227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 200 bits (508), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 128/201 (63%), Gaps = 10/201 (4%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LKE A ER L+ EL +M L H N+V LLG CT P ++I EY YG L
Sbjct: 78 VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL 137
Query: 85 SFLRSSRAQ------RYYNNMHGKS----NSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
++LRS R + Y N + N LT DL F YQVA+GM+FL + +HRD
Sbjct: 138 NYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRD 197
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
LAARNVL+ K+ DFG ARD+M+ S Y + RLP++WMAPESL++ I+++KSD+
Sbjct: 198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDV 257
Query: 195 WSFGVLIWEIVTLGSTPYPGM 215
WS+G+L+WEI +LG PYPG+
Sbjct: 258 WSYGILLWEIFSLGVNPYPGI 278
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 199 bits (505), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 130/200 (65%), Gaps = 2/200 (1%)
Query: 18 GREGPCI-VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
G+E + VAVK LK A E+ L+ EL +M L H N+V LLG CT P VI E
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 77 YVPYGKLQSFLR-SSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
Y YG L +FLR SR +++L++RDL F QVA+GM FL+S+ IHRD+
Sbjct: 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDV 190
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
AARNVL+ H K+ DFG ARD+M S Y K RLP++WMAPES++D +++V+SD+W
Sbjct: 191 AARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVW 250
Query: 196 SFGVLIWEIVTLGSTPYPGM 215
S+G+L+WEI +LG PYPG+
Sbjct: 251 SYGILLWEIFSLGLNPYPGI 270
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 197 bits (500), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 129/200 (64%), Gaps = 2/200 (1%)
Query: 18 GREGPCI-VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
G+E + VAVK LK A E+ L+ EL +M L H N+V LLG CT P VI E
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 77 YVPYGKLQSFLR-SSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
Y YG L +FLR SR +++ ++RDL F QVA+GM FL+S+ IHRD+
Sbjct: 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDV 190
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
AARNVL+ H K+ DFG ARD+M S Y K RLP++WMAPES++D +++V+SD+W
Sbjct: 191 AARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVW 250
Query: 196 SFGVLIWEIVTLGSTPYPGM 215
S+G+L+WEI +LG PYPG+
Sbjct: 251 SYGILLWEIFSLGLNPYPGI 270
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 196 bits (497), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 129/199 (64%), Gaps = 4/199 (2%)
Query: 18 GREGPCI-VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
G+E + VAVK LK A E+ L+ EL +M L H N+V LLG CT P VI E
Sbjct: 63 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 122
Query: 77 YVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLA 136
Y YG L +FLR +A+ + G+ L RDL F QVA+GM FL+S+ IHRD+A
Sbjct: 123 YCCYGDLLNFLRR-KAEADLDKEDGRP--LELRDLLHFSSQVAQGMAFLASKNCIHRDVA 179
Query: 137 ARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWS 196
ARNVL+ H K+ DFG ARD+M S Y K RLP++WMAPES++D +++V+SD+WS
Sbjct: 180 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWS 239
Query: 197 FGVLIWEIVTLGSTPYPGM 215
+G+L+WEI +LG PYPG+
Sbjct: 240 YGILLWEIFSLGLNPYPGI 258
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 195 bits (496), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 129/199 (64%), Gaps = 4/199 (2%)
Query: 18 GREGPCI-VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
G+E + VAVK LK A E+ L+ EL +M L H N+V LLG CT P VI E
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 77 YVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLA 136
Y YG L +FLR +A+ + G+ L RDL F QVA+GM FL+S+ IHRD+A
Sbjct: 131 YCCYGDLLNFLRR-KAEADLDKEDGRP--LELRDLLHFSSQVAQGMAFLASKNCIHRDVA 187
Query: 137 ARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWS 196
ARNVL+ H K+ DFG ARD+M S Y K RLP++WMAPES++D +++V+SD+WS
Sbjct: 188 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWS 247
Query: 197 FGVLIWEIVTLGSTPYPGM 215
+G+L+WEI +LG PYPG+
Sbjct: 248 YGILLWEIFSLGLNPYPGI 266
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 194 bits (492), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 134/197 (68%), Gaps = 4/197 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKE-PFFVIMEYVPYGKL 83
VAVK LKE A E L+ EL ++ + H NVV LLG CT+ P VI+E+ +G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 84 QSFLRSSRAQRY-YNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI 142
++LRS R + Y +++ + LT L + +QVA+GM+FL+SR IHRDLAARN+L+
Sbjct: 120 STYLRSKRNEFVPYKDLY--KDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILL 177
Query: 143 GENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
E + K+ DFG ARD+ Y RK + RLP++WMAPE+++D +++++SD+WSFGVL+W
Sbjct: 178 SEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 237
Query: 203 EIVTLGSTPYPGMAAAE 219
EI +LG++PYPG+ E
Sbjct: 238 EIFSLGASPYPGVKIDE 254
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 193 bits (490), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 134/197 (68%), Gaps = 4/197 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKE-PFFVIMEYVPYGKL 83
VAVK LKE A E L+ EL ++ + H NVV LLG CT+ P VI+E+ +G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 84 QSFLRSSRAQRY-YNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI 142
++LRS R + Y +++ + LT L + +QVA+GM+FL+SR IHRDLAARN+L+
Sbjct: 120 STYLRSKRNEFVPYKDLY--KDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILL 177
Query: 143 GENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
E + K+ DFG ARD+ Y RK + RLP++WMAPE+++D +++++SD+WSFGVL+W
Sbjct: 178 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 237
Query: 203 EIVTLGSTPYPGMAAAE 219
EI +LG++PYPG+ E
Sbjct: 238 EIFSLGASPYPGVKIDE 254
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 191 bits (484), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 131/202 (64%), Gaps = 6/202 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
A+K +KE A + + D EL V+ L HPN++ LLG C + ++ +EY P+G L
Sbjct: 55 AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLL 114
Query: 85 SFLRSSRAQRY---YNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
FLR SR + + +++L+S+ L F VARGM +LS + IHRDLAARN+L
Sbjct: 115 DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNIL 174
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+GEN+ K+ADFG +R VY +K+ GRLP+RWMA ESL ++++ SD+WS+GVL+
Sbjct: 175 VGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 231
Query: 202 WEIVTLGSTPYPGMAAAEVMKK 223
WEIV+LG TPY GM AE+ +K
Sbjct: 232 WEIVSLGGTPYCGMTCAELYEK 253
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 191 bits (484), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 131/202 (64%), Gaps = 6/202 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
A+K +KE A + + D EL V+ L HPN++ LLG C + ++ +EY P+G L
Sbjct: 45 AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLL 104
Query: 85 SFLRSSRAQRY---YNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
FLR SR + + +++L+S+ L F VARGM +LS + IHRDLAARN+L
Sbjct: 105 DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNIL 164
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+GEN+ K+ADFG +R VY +K+ GRLP+RWMA ESL ++++ SD+WS+GVL+
Sbjct: 165 VGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 221
Query: 202 WEIVTLGSTPYPGMAAAEVMKK 223
WEIV+LG TPY GM AE+ +K
Sbjct: 222 WEIVSLGGTPYCGMTCAELYEK 243
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 190 bits (482), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 127/214 (59%), Gaps = 21/214 (9%)
Query: 18 GREGPCI-VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
G+E + VAVK LK A E+ L+ EL +M L H N+V LLG CT P VI E
Sbjct: 56 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 115
Query: 77 YVPYGKLQSFLRSSRAQRYYNNMHGKS---------------NSLTSRDLTSFCYQVARG 121
Y YG L +FLR R M G S L RDL F QVA+G
Sbjct: 116 YCCYGDLLNFLR-----RKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQG 170
Query: 122 MQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPE 181
M FL+S+ IHRD+AARNVL+ H K+ DFG ARD+M S Y K RLP++WMAPE
Sbjct: 171 MAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE 230
Query: 182 SLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGM 215
S++D +++V+SD+WS+G+L+WEI +LG PYPG+
Sbjct: 231 SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 264
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 189 bits (481), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 132/199 (66%), Gaps = 4/199 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKE-PFFVIMEYVPYGKL 83
VAVK LKE A E L+ EL ++ + H NVV LLG CT+ P VI+E+ +G L
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 156
Query: 84 QSFLRSSRAQRYYNNMHGKS---NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
++LRS R + + + + LT L + +QVA+GM+FL+SR IHRDLAARN+
Sbjct: 157 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 216
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ E + K+ DFG ARD+ Y RK + RLP++WMAPE+++D +++++SD+WSFGVL
Sbjct: 217 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 276
Query: 201 IWEIVTLGSTPYPGMAAAE 219
+WEI +LG++PYPG+ E
Sbjct: 277 LWEIFSLGASPYPGVKIDE 295
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 189 bits (481), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 132/199 (66%), Gaps = 4/199 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKE-PFFVIMEYVPYGKL 83
VAVK LKE A E L+ EL ++ + H NVV LLG CT+ P VI+E+ +G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 84 QSFLRSSRAQRYYNNMHGKS---NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
++LRS R + + + + LT L + +QVA+GM+FL+SR IHRDLAARN+
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 179
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ E + K+ DFG ARD+ Y RK + RLP++WMAPE+++D +++++SD+WSFGVL
Sbjct: 180 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 239
Query: 201 IWEIVTLGSTPYPGMAAAE 219
+WEI +LG++PYPG+ E
Sbjct: 240 LWEIFSLGASPYPGVKIDE 258
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 189 bits (480), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 130/197 (65%), Gaps = 2/197 (1%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKE-PFFVIMEYVPYGKL 83
VAVK LKE A E L+ EL ++ + H NVV LLG CT+ P VI+E+ +G L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 84 QSFLRSSRAQRY-YNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI 142
++LRS R + Y + LT L + +QVA+GM+FL+SR IHRDLAARN+L+
Sbjct: 122 STYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILL 181
Query: 143 GENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
E + K+ DFG ARD+ RK + RLP++WMAPE+++D +++++SD+WSFGVL+W
Sbjct: 182 SEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 241
Query: 203 EIVTLGSTPYPGMAAAE 219
EI +LG++PYPG+ E
Sbjct: 242 EIFSLGASPYPGVKIDE 258
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 189 bits (480), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 131/199 (65%), Gaps = 4/199 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKE-PFFVIMEYVPYGKL 83
VAVK LKE A E L+ EL ++ + H NVV LLG CT+ P VI E+ +G L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 84 QSFLRSSRAQRYYNNMHGKS---NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
++LRS R + + + + LT L + +QVA+GM+FL+SR IHRDLAARN+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 170
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ E + K+ DFG ARD+ Y RK + RLP++WMAPE+++D +++++SD+WSFGVL
Sbjct: 171 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 230
Query: 201 IWEIVTLGSTPYPGMAAAE 219
+WEI +LG++PYPG+ E
Sbjct: 231 LWEIFSLGASPYPGVKIDE 249
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 189 bits (480), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 131/202 (64%), Gaps = 6/202 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
A+K +KE A + + D EL V+ L HPN++ LLG C + ++ +EY P+G L
Sbjct: 52 AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLL 111
Query: 85 SFLRSSRAQRY---YNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
FLR SR + + +++L+S+ L F VARGM +LS + IHR+LAARN+L
Sbjct: 112 DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNIL 171
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+GEN+ K+ADFG +R VY +K+ GRLP+RWMA ESL ++++ SD+WS+GVL+
Sbjct: 172 VGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 228
Query: 202 WEIVTLGSTPYPGMAAAEVMKK 223
WEIV+LG TPY GM AE+ +K
Sbjct: 229 WEIVSLGGTPYCGMTCAELYEK 250
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 189 bits (480), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 131/199 (65%), Gaps = 4/199 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKE-PFFVIMEYVPYGKL 83
VAVK LKE A E L+ EL ++ + H NVV LLG CT+ P VI E+ +G L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 84 QSFLRSSRAQRYYNNMHGKS---NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
++LRS R + + + + LT L + +QVA+GM+FL+SR IHRDLAARN+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 170
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ E + K+ DFG ARD+ Y RK + RLP++WMAPE+++D +++++SD+WSFGVL
Sbjct: 171 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 230
Query: 201 IWEIVTLGSTPYPGMAAAE 219
+WEI +LG++PYPG+ E
Sbjct: 231 LWEIFSLGASPYPGVKIDE 249
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 188 bits (478), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 131/199 (65%), Gaps = 4/199 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKE-PFFVIMEYVPYGKL 83
VAVK LKE A E L+ EL ++ + H NVV LLG CT+ P VI+E+ +G L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 84 QSFLRSSRAQRYYNNMHGKS---NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
++LRS R + + + LT L + +QVA+GM+FL+SR IHRDLAARN+
Sbjct: 122 STYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 181
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ E + K+ DFG ARD+ Y RK + RLP++WMAPE+++D +++++SD+WSFGVL
Sbjct: 182 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 241
Query: 201 IWEIVTLGSTPYPGMAAAE 219
+WEI +LG++PYPG+ E
Sbjct: 242 LWEIFSLGASPYPGVKIDE 260
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 188 bits (477), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 130/198 (65%), Gaps = 3/198 (1%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKE-PFFVIMEYVPYGKL 83
VAVK LKE A E L+ EL ++ + H NVV LLG CT+ P VI+E+ +G L
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 120
Query: 84 QSFLRSSRAQ--RYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
++LRS R + Y + LT L + +QVA+GM+FL+SR IHRDLAARN+L
Sbjct: 121 STYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 180
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ E + K+ DFG ARD+ RK + RLP++WMAPE+++D +++++SD+WSFGVL+
Sbjct: 181 LSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 240
Query: 202 WEIVTLGSTPYPGMAAAE 219
WEI +LG++PYPG+ E
Sbjct: 241 WEIFSLGASPYPGVKIDE 258
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 187 bits (475), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 126/196 (64%), Gaps = 15/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF+++ EY+PYG L
Sbjct: 60 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTLEPPFYIVTEYMPYGNLL 116
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR + +T+ L Q++ M++L + IHRDLAARN L+GE
Sbjct: 117 DYLRECNREE-----------VTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 165
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT Y + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 166 NHVVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 224
Query: 205 VTLGSTPYPGMAAAEV 220
T G +PYPG+ ++V
Sbjct: 225 ATYGMSPYPGIDLSQV 240
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 187 bits (474), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 131/199 (65%), Gaps = 4/199 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKE-PFFVIMEYVPYGKL 83
VAVK LKE A E L+ EL ++ + H NVV LLG CT+ P VI+E+ +G L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 110
Query: 84 QSFLRSSRAQRYYNNMHGKS---NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
++LRS R + + + + LT L + +QVA+GM+FL+SR IHRDLAARN+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 170
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ E + K+ DFG ARD+ RK + RLP++WMAPE+++D +++++SD+WSFGVL
Sbjct: 171 LLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 230
Query: 201 IWEIVTLGSTPYPGMAAAE 219
+WEI +LG++PYPG+ E
Sbjct: 231 LWEIFSLGASPYPGVKIDE 249
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 187 bits (474), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 105/250 (42%), Positives = 140/250 (56%), Gaps = 55/250 (22%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEK-EPFFVIMEYVPYGKL 83
VAVK LKE A E L+ EL ++ + H NVV LLG CT++ P VI+EY YG L
Sbjct: 60 VAVKMLKEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNL 119
Query: 84 QSFLRSSRAQRYYNN---MH--------------GKS---NSLTS--------------- 108
++L+S R + N +H GK +S+TS
Sbjct: 120 SNYLKSKRDLFFLNKDAALHMEPKKEKMEPGLEQGKKPRLDSVTSSESFASSGFQEDKSL 179
Query: 109 -------------------RDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCK 149
DL S+ +QVARGM+FLSSR IHRDLAARN+L+ EN+ K
Sbjct: 180 SDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVK 239
Query: 150 VADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGS 209
+ DFG ARD+ + Y RK + RLP++WMAPES++D I+S KSD+WS+GVL+WEI +LG
Sbjct: 240 ICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGG 299
Query: 210 TPYPGMAAAE 219
+PYPG+ E
Sbjct: 300 SPYPGVQMDE 309
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 187 bits (474), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 131/199 (65%), Gaps = 4/199 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKE-PFFVIMEYVPYGKL 83
VAVK LKE A E L+ EL ++ + H NVV LLG CT+ P VI+E+ +G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 84 QSFLRSSRAQRYYNNMHGKS---NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
++LRS R + + + + LT L + +QVA+GM+FL+SR IHRDLAARN+
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 179
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ E + K+ DFG ARD+ RK + RLP++WMAPE+++D +++++SD+WSFGVL
Sbjct: 180 LLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 239
Query: 201 IWEIVTLGSTPYPGMAAAE 219
+WEI +LG++PYPG+ E
Sbjct: 240 LWEIFSLGASPYPGVKIDE 258
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 186 bits (473), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 131/199 (65%), Gaps = 4/199 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKE-PFFVIMEYVPYGKL 83
VAVK LKE A E L+ EL ++ + H NVV LLG CT+ P VI+E+ +G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 84 QSFLRSSRAQRYYNNMHGKS---NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
++LRS R + + + + LT L + +QVA+GM+FL+SR IHRDLAARN+
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 179
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ E + K+ DFG ARD+ RK + RLP++WMAPE+++D +++++SD+WSFGVL
Sbjct: 180 LLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 239
Query: 201 IWEIVTLGSTPYPGMAAAE 219
+WEI +LG++PYPG+ E
Sbjct: 240 LWEIFSLGASPYPGVKIDE 258
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 186 bits (472), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 130/199 (65%), Gaps = 4/199 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKE-PFFVIMEYVPYGKL 83
VAVK LKE A E L+ EL ++ + H NVV LLG CT+ P VI E+ +G L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 84 QSFLRSSRAQRYYNNMHGKS---NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
++LRS R + + + + LT L + +QVA+GM+FL+SR IHRDLAARN+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 170
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ E + K+ DFG ARD+ RK + RLP++WMAPE+++D +++++SD+WSFGVL
Sbjct: 171 LLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 230
Query: 201 IWEIVTLGSTPYPGMAAAE 219
+WEI +LG++PYPG+ E
Sbjct: 231 LWEIFSLGASPYPGVKIDE 249
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 184 bits (466), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 126/196 (64%), Gaps = 15/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I+E++ YG L
Sbjct: 41 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLL 97
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q +++ L Q++ M++L + IHRDLAARN L+GE
Sbjct: 98 DYLRECNRQE-----------VSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 146
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT Y + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 205 VTLGSTPYPGMAAAEV 220
T G +PYPG+ ++V
Sbjct: 206 ATYGMSPYPGIDLSQV 221
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 184 bits (466), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 126/196 (64%), Gaps = 15/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I+E++ YG L
Sbjct: 41 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLL 97
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q +++ L Q++ M++L + IHRDLAARN L+GE
Sbjct: 98 DYLRECNRQE-----------VSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 146
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT Y + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 205 VTLGSTPYPGMAAAEV 220
T G +PYPG+ ++V
Sbjct: 206 ATYGMSPYPGIDLSQV 221
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 183 bits (464), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 125/196 (63%), Gaps = 15/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I+E++ YG L
Sbjct: 46 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLL 102
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q + + L Q++ M++L + IHRDLAARN L+GE
Sbjct: 103 DYLRECNRQE-----------VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 151
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT Y + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 152 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 205 VTLGSTPYPGMAAAEV 220
T G +PYPG+ ++V
Sbjct: 211 ATYGMSPYPGIDLSQV 226
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 183 bits (464), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 125/196 (63%), Gaps = 15/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I E++ YG L
Sbjct: 41 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q +++ L Q++ M++L + IHRDLAARN L+GE
Sbjct: 98 DYLRECNRQE-----------VSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 146
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT Y + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 205 VTLGSTPYPGMAAAEV 220
T G +PYPG+ ++V
Sbjct: 206 ATYGMSPYPGIDLSQV 221
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 183 bits (464), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 125/196 (63%), Gaps = 15/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I E++ YG L
Sbjct: 41 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q +++ L Q++ M++L + IHRDLAARN L+GE
Sbjct: 98 DYLRECNRQE-----------VSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 146
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT Y + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 205 VTLGSTPYPGMAAAEV 220
T G +PYPG+ ++V
Sbjct: 206 ATYGMSPYPGIDLSQV 221
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 183 bits (464), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 125/196 (63%), Gaps = 15/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I E++ YG L
Sbjct: 46 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q +++ L Q++ M++L + IHRDLAARN L+GE
Sbjct: 103 DYLRECNRQE-----------VSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 151
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT Y + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 152 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 205 VTLGSTPYPGMAAAEV 220
T G +PYPG+ ++V
Sbjct: 211 ATYGMSPYPGIDLSQV 226
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 182 bits (463), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 124/196 (63%), Gaps = 15/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I E++ YG L
Sbjct: 43 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q + + L Q++ M++L + IHRDLAARN L+GE
Sbjct: 100 DYLRECNRQE-----------VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 148
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT Y + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 149 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
Query: 205 VTLGSTPYPGMAAAEV 220
T G +PYPG+ ++V
Sbjct: 208 ATYGMSPYPGIDLSQV 223
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 182 bits (463), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 124/196 (63%), Gaps = 15/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I E++ YG L
Sbjct: 46 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q + + L Q++ M++L + IHRDLAARN L+GE
Sbjct: 103 DYLRECNRQE-----------VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 151
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT Y + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 152 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 205 VTLGSTPYPGMAAAEV 220
T G +PYPG+ ++V
Sbjct: 211 ATYGMSPYPGIDLSQV 226
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 182 bits (463), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 124/196 (63%), Gaps = 15/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I E++ YG L
Sbjct: 46 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q + + L Q++ M++L + IHRDLAARN L+GE
Sbjct: 103 DYLRECNRQE-----------VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 151
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT Y + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 152 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 205 VTLGSTPYPGMAAAEV 220
T G +PYPG+ ++V
Sbjct: 211 ATYGMSPYPGIDLSQV 226
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 182 bits (463), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 124/196 (63%), Gaps = 15/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I E++ YG L
Sbjct: 43 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q + + L Q++ M++L + IHRDLAARN L+GE
Sbjct: 100 DYLRECNRQE-----------VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 148
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT Y + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 149 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
Query: 205 VTLGSTPYPGMAAAEV 220
T G +PYPG+ ++V
Sbjct: 208 ATYGMSPYPGIDLSQV 223
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 182 bits (463), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 124/196 (63%), Gaps = 15/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I E++ YG L
Sbjct: 54 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLL 110
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q + + L Q++ M++L + IHRDLAARN L+GE
Sbjct: 111 DYLRECNRQE-----------VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 159
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT Y + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 160 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 218
Query: 205 VTLGSTPYPGMAAAEV 220
T G +PYPG+ ++V
Sbjct: 219 ATYGMSPYPGIDLSQV 234
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 182 bits (462), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 124/196 (63%), Gaps = 15/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I E++ YG L
Sbjct: 41 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q + + L Q++ M++L + IHRDLAARN L+GE
Sbjct: 98 DYLRECNRQE-----------VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 146
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT Y + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 205 VTLGSTPYPGMAAAEV 220
T G +PYPG+ ++V
Sbjct: 206 ATYGMSPYPGIDLSQV 221
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 182 bits (462), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 124/196 (63%), Gaps = 15/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I E++ YG L
Sbjct: 41 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q + + L Q++ M++L + IHRDLAARN L+GE
Sbjct: 98 DYLRECNRQE-----------VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 146
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT Y + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 205 VTLGSTPYPGMAAAEV 220
T G +PYPG+ ++V
Sbjct: 206 ATYGMSPYPGIDLSQV 221
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 182 bits (462), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 124/196 (63%), Gaps = 15/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I E++ YG L
Sbjct: 42 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLL 98
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q + + L Q++ M++L + IHRDLAARN L+GE
Sbjct: 99 DYLRECNRQE-----------VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 147
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT Y + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 148 NHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
Query: 205 VTLGSTPYPGMAAAEV 220
T G +PYPG+ ++V
Sbjct: 207 ATYGMSPYPGIDLSQV 222
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 182 bits (462), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 124/196 (63%), Gaps = 15/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I E++ YG L
Sbjct: 43 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q + + L Q++ M++L + IHRDLAARN L+GE
Sbjct: 100 DYLRECNRQE-----------VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 148
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT Y + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 149 NHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
Query: 205 VTLGSTPYPGMAAAEV 220
T G +PYPG+ ++V
Sbjct: 208 ATYGMSPYPGIDLSQV 223
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 182 bits (462), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 124/196 (63%), Gaps = 15/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I E++ YG L
Sbjct: 45 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLL 101
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q + + L Q++ M++L + IHRDLAARN L+GE
Sbjct: 102 DYLRECNRQE-----------VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 150
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT Y + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 151 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 209
Query: 205 VTLGSTPYPGMAAAEV 220
T G +PYPG+ ++V
Sbjct: 210 ATYGMSPYPGIDLSQV 225
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 181 bits (460), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 125/196 (63%), Gaps = 15/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I E++ YG L
Sbjct: 39 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLL 95
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q +++ L Q++ M++L + IHRDLAARN L+GE
Sbjct: 96 DYLRECNRQE-----------VSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 144
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT + + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 145 NHLVKVADFGLSR-LMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
Query: 205 VTLGSTPYPGMAAAEV 220
T G +PYPG+ ++V
Sbjct: 204 ATYGMSPYPGIDPSQV 219
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 181 bits (460), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 126/198 (63%), Gaps = 15/198 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I E++ YG L
Sbjct: 248 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLL 304
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q +++ L Q++ M++L + IHR+LAARN L+GE
Sbjct: 305 DYLRECNRQE-----------VSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGE 353
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT Y + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 354 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
Query: 205 VTLGSTPYPGMAAAEVMK 222
T G +PYPG+ ++V +
Sbjct: 413 ATYGMSPYPGIDLSQVYE 430
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 181 bits (459), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 124/196 (63%), Gaps = 15/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I E++ YG L
Sbjct: 245 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLL 301
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q + + L Q++ M++L + IHR+LAARN L+GE
Sbjct: 302 DYLRECNRQE-----------VNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGE 350
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT Y + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 351 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 409
Query: 205 VTLGSTPYPGMAAAEV 220
T G +PYPG+ ++V
Sbjct: 410 ATYGMSPYPGIDLSQV 425
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 181 bits (459), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 123/196 (62%), Gaps = 5/196 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LK +A ER L+ EL V+ L H N+V LLG CT P VI EY YG L
Sbjct: 72 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 131
Query: 85 SFLRSSRAQRYYNN-----MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARN 139
+FLR R + M +L DL SF YQVA+GM FL+S+ IHRDLAARN
Sbjct: 132 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 191
Query: 140 VLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGV 199
+L+ K+ DFG ARD+ S Y K RLP++WMAPES+++ +++ +SD+WS+G+
Sbjct: 192 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 251
Query: 200 LIWEIVTLGSTPYPGM 215
+WE+ +LGS+PYPGM
Sbjct: 252 FLWELFSLGSSPYPGM 267
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 181 bits (458), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 123/196 (62%), Gaps = 5/196 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LK +A ER L+ EL V+ L H N+V LLG CT P VI EY YG L
Sbjct: 56 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 115
Query: 85 SFLRSSRAQRYYNN-----MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARN 139
+FLR R + M +L DL SF YQVA+GM FL+S+ IHRDLAARN
Sbjct: 116 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 175
Query: 140 VLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGV 199
+L+ K+ DFG ARD+ S Y K RLP++WMAPES+++ +++ +SD+WS+G+
Sbjct: 176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 235
Query: 200 LIWEIVTLGSTPYPGM 215
+WE+ +LGS+PYPGM
Sbjct: 236 FLWELFSLGSSPYPGM 251
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 181 bits (458), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 123/196 (62%), Gaps = 5/196 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LK +A ER L+ EL V+ L H N+V LLG CT P VI EY YG L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 85 SFLRSSRAQRYYNN-----MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARN 139
+FLR R + M +L DL SF YQVA+GM FL+S+ IHRDLAARN
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 198
Query: 140 VLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGV 199
+L+ K+ DFG ARD+ S Y K RLP++WMAPES+++ +++ +SD+WS+G+
Sbjct: 199 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 258
Query: 200 LIWEIVTLGSTPYPGM 215
+WE+ +LGS+PYPGM
Sbjct: 259 FLWELFSLGSSPYPGM 274
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 181 bits (458), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 123/196 (62%), Gaps = 5/196 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LK +A ER L+ EL V+ L H N+V LLG CT P VI EY YG L
Sbjct: 74 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 133
Query: 85 SFLRSSRAQRYYNN-----MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARN 139
+FLR R + M +L DL SF YQVA+GM FL+S+ IHRDLAARN
Sbjct: 134 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 193
Query: 140 VLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGV 199
+L+ K+ DFG ARD+ S Y K RLP++WMAPES+++ +++ +SD+WS+G+
Sbjct: 194 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 253
Query: 200 LIWEIVTLGSTPYPGM 215
+WE+ +LGS+PYPGM
Sbjct: 254 FLWELFSLGSSPYPGM 269
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 181 bits (458), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 125/198 (63%), Gaps = 15/198 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I E++ YG L
Sbjct: 287 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLL 343
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q + + L Q++ M++L + IHR+LAARN L+GE
Sbjct: 344 DYLRECNRQE-----------VNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGE 392
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT Y + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 393 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 451
Query: 205 VTLGSTPYPGMAAAEVMK 222
T G +PYPG+ ++V +
Sbjct: 452 ATYGMSPYPGIDLSQVYE 469
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 180 bits (457), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 125/196 (63%), Gaps = 15/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I+E++ YG L
Sbjct: 39 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLL 95
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q +++ L Q++ M++L + IHRDLAARN L+GE
Sbjct: 96 DYLRECNRQE-----------VSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 144
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 145 NHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
Query: 205 VTLGSTPYPGMAAAEV 220
T G +PYPG+ ++V
Sbjct: 204 ATYGMSPYPGIDPSQV 219
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 180 bits (456), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 124/196 (63%), Gaps = 15/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I+E++ YG L
Sbjct: 42 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLL 98
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q + + L Q++ M++L + IHRDLAARN L+GE
Sbjct: 99 DYLRECNRQE-----------VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 147
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 148 NHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
Query: 205 VTLGSTPYPGMAAAEV 220
T G +PYPG+ ++V
Sbjct: 207 ATYGMSPYPGIDLSQV 222
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 180 bits (456), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 124/196 (63%), Gaps = 15/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I E++ YG L
Sbjct: 39 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLL 95
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q +++ L Q++ M++L + IHRDLAARN L+GE
Sbjct: 96 DYLRECNRQE-----------VSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 144
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 145 NHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
Query: 205 VTLGSTPYPGMAAAEV 220
T G +PYPG+ ++V
Sbjct: 204 ATYGMSPYPGIDPSQV 219
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 179 bits (454), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 123/196 (62%), Gaps = 15/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLKE+ E E + L+E VMK + HPN+V+LLG CT + PF++I E++ YG L
Sbjct: 46 VAVKTLKEDTMEVE--EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR Q + + L Q++ M++L + IHRDLAARN L+GE
Sbjct: 103 DYLRECNRQE-----------VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE 151
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
NH KVADFG +R LMT + + PI+W APESL N FS+KSD+W+FGVL+WEI
Sbjct: 152 NHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 205 VTLGSTPYPGMAAAEV 220
T G +PYPG+ ++V
Sbjct: 211 ATYGMSPYPGIDLSQV 226
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 178 bits (451), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 122/196 (62%), Gaps = 5/196 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK LK +A ER L+ EL V+ L H N+V LLG CT P VI EY YG L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 85 SFLRSSRAQRYYNN-----MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARN 139
+FLR R + M +L DL SF YQVA+GM FL+S+ IHRDLAARN
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 198
Query: 140 VLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGV 199
+L+ K+ DFG AR + S Y K RLP++WMAPES+++ +++ +SD+WS+G+
Sbjct: 199 ILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 258
Query: 200 LIWEIVTLGSTPYPGM 215
+WE+ +LGS+PYPGM
Sbjct: 259 FLWELFSLGSSPYPGM 274
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 177 bits (449), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 131/203 (64%), Gaps = 4/203 (1%)
Query: 20 EGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVP 79
E VAVKT+ E+A RER++ L E +VMK H +VVRLLG ++ +P V+ME +
Sbjct: 45 EAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMA 103
Query: 80 YGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARN 139
+G L+S+LRS R + N G+ T +++ ++A GM +L+++ +HRDLAARN
Sbjct: 104 HGDLKSYLRSLRPEA--ENNPGRPPP-TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARN 160
Query: 140 VLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGV 199
++ + K+ DFG RD+ ++ Y + +G LP+RWMAPESL D +F+ SD+WSFGV
Sbjct: 161 CMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 200 LIWEIVTLGSTPYPGMAAAEVMK 222
++WEI +L PY G++ +V+K
Sbjct: 221 VLWEITSLAEQPYQGLSNEQVLK 243
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 177 bits (448), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 130/203 (64%), Gaps = 4/203 (1%)
Query: 20 EGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVP 79
E VAVKT+ E+A RER++ L E +VMK H +VVRLLG ++ +P V+ME +
Sbjct: 44 EAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMA 102
Query: 80 YGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARN 139
+G L+S+LRS R + N G+ T +++ ++A GM +L+++ +HRDLAARN
Sbjct: 103 HGDLKSYLRSLRPEA--ENNPGRPPP-TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARN 159
Query: 140 VLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGV 199
++ + K+ DFG RD+ + Y + +G LP+RWMAPESL D +F+ SD+WSFGV
Sbjct: 160 CMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 219
Query: 200 LIWEIVTLGSTPYPGMAAAEVMK 222
++WEI +L PY G++ +V+K
Sbjct: 220 VLWEITSLAEQPYQGLSNEQVLK 242
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 176 bits (447), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 130/203 (64%), Gaps = 4/203 (1%)
Query: 20 EGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVP 79
E VAVKT+ E+A RER++ L E +VMK H +VVRLLG ++ +P V+ME +
Sbjct: 45 EAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMA 103
Query: 80 YGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARN 139
+G L+S+LRS R + N G+ T +++ ++A GM +L+++ +HRDLAARN
Sbjct: 104 HGDLKSYLRSLRPEA--ENNPGRPPP-TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARN 160
Query: 140 VLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGV 199
++ + K+ DFG RD+ + Y + +G LP+RWMAPESL D +F+ SD+WSFGV
Sbjct: 161 CMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 200 LIWEIVTLGSTPYPGMAAAEVMK 222
++WEI +L PY G++ +V+K
Sbjct: 221 VLWEITSLAEQPYQGLSNEQVLK 243
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 175 bits (443), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 130/203 (64%), Gaps = 4/203 (1%)
Query: 20 EGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVP 79
E VAVKT+ E+A RER++ L E +VMK H +VVRLLG ++ +P V+ME +
Sbjct: 45 EAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMA 103
Query: 80 YGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARN 139
+G L+S+LRS R + N G+ T +++ ++A GM +L+++ +HR+LAARN
Sbjct: 104 HGDLKSYLRSLRPEA--ENNPGRPPP-TLQEMIQMAAEIADGMAYLNAKKFVHRNLAARN 160
Query: 140 VLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGV 199
++ + K+ DFG RD+ + Y + +G LP+RWMAPESL D +F+ SD+WSFGV
Sbjct: 161 CMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 200 LIWEIVTLGSTPYPGMAAAEVMK 222
++WEI +L PY G++ +V+K
Sbjct: 221 VLWEITSLAEQPYQGLSNEQVLK 243
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 174 bits (442), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 130/203 (64%), Gaps = 4/203 (1%)
Query: 20 EGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVP 79
E VAVKT+ E+A RER++ L E +VMK H +VVRLLG ++ +P V+ME +
Sbjct: 46 EAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMA 104
Query: 80 YGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARN 139
+G L+S+LRS R + N G+ T +++ ++A GM +L+++ +HR+LAARN
Sbjct: 105 HGDLKSYLRSLRPEA--ENNPGRPPP-TLQEMIQMAAEIADGMAYLNAKKFVHRNLAARN 161
Query: 140 VLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGV 199
++ + K+ DFG RD+ + Y + +G LP+RWMAPESL D +F+ SD+WSFGV
Sbjct: 162 CMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 221
Query: 200 LIWEIVTLGSTPYPGMAAAEVMK 222
++WEI +L PY G++ +V+K
Sbjct: 222 VLWEITSLAEQPYQGLSNEQVLK 244
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 174 bits (442), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 127/198 (64%), Gaps = 4/198 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KT+ E A RER++ L E +VMK + H +VVRLLG ++ +P VIME + G L+
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLK 109
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
S+LRS R + NN SL+ + ++A GM +L++ +HRDLAARN ++ E
Sbjct: 110 SYLRSLRPE-MENNPVLAPPSLSK--MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 166
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG RD+ + Y + +G LP+RWM+PESL D +F+ SD+WSFGV++WEI
Sbjct: 167 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
Query: 205 VTLGSTPYPGMAAAEVMK 222
TL PY G++ +V++
Sbjct: 227 ATLAEQPYQGLSNEQVLR 244
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 174 bits (442), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 127/198 (64%), Gaps = 4/198 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KT+ E A RER++ L E +VMK + H +VVRLLG ++ +P VIME + G L+
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLK 116
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
S+LRS R + NN SL+ + ++A GM +L++ +HRDLAARN ++ E
Sbjct: 117 SYLRSLRPE-MENNPVLAPPSLSK--MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 173
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG RD+ + Y + +G LP+RWM+PESL D +F+ SD+WSFGV++WEI
Sbjct: 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
Query: 205 VTLGSTPYPGMAAAEVMK 222
TL PY G++ +V++
Sbjct: 234 ATLAEQPYQGLSNEQVLR 251
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 174 bits (442), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 127/198 (64%), Gaps = 4/198 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KT+ E A RER++ L E +VMK + H +VVRLLG ++ +P VIME + G L+
Sbjct: 49 VAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLK 107
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
S+LRS R + NN SL+ + ++A GM +L++ +HRDLAARN ++ E
Sbjct: 108 SYLRSLRPE-MENNPVLAPPSLSK--MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 164
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG RD+ + Y + +G LP+RWM+PESL D +F+ SD+WSFGV++WEI
Sbjct: 165 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
Query: 205 VTLGSTPYPGMAAAEVMK 222
TL PY G++ +V++
Sbjct: 225 ATLAEQPYQGLSNEQVLR 242
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 174 bits (442), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 127/198 (64%), Gaps = 4/198 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KT+ E A RER++ L E +VMK + H +VVRLLG ++ +P VIME + G L+
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLK 109
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
S+LRS R + NN SL+ + ++A GM +L++ +HRDLAARN ++ E
Sbjct: 110 SYLRSLRPE-MENNPVLAPPSLSK--MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 166
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG RD+ + Y + +G LP+RWM+PESL D +F+ SD+WSFGV++WEI
Sbjct: 167 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
Query: 205 VTLGSTPYPGMAAAEVMK 222
TL PY G++ +V++
Sbjct: 227 ATLAEQPYQGLSNEQVLR 244
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 174 bits (441), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 127/198 (64%), Gaps = 4/198 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KT+ E A RER++ L E +VMK + H +VVRLLG ++ +P VIME + G L+
Sbjct: 52 VAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLK 110
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
S+LRS R + NN SL+ + ++A GM +L++ +HRDLAARN ++ E
Sbjct: 111 SYLRSLRPE-MENNPVLAPPSLSK--MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 167
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG RD+ + Y + +G LP+RWM+PESL D +F+ SD+WSFGV++WEI
Sbjct: 168 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
Query: 205 VTLGSTPYPGMAAAEVMK 222
TL PY G++ +V++
Sbjct: 228 ATLAEQPYQGLSNEQVLR 245
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 174 bits (441), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 127/198 (64%), Gaps = 4/198 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KT+ E A RER++ L E +VMK + H +VVRLLG ++ +P VIME + G L+
Sbjct: 45 VAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLK 103
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
S+LRS R + NN SL+ + ++A GM +L++ +HRDLAARN ++ E
Sbjct: 104 SYLRSLRPE-MENNPVLAPPSLSK--MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 160
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG RD+ + Y + +G LP+RWM+PESL D +F+ SD+WSFGV++WEI
Sbjct: 161 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
Query: 205 VTLGSTPYPGMAAAEVMK 222
TL PY G++ +V++
Sbjct: 221 ATLAEQPYQGLSNEQVLR 238
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 174 bits (441), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 127/198 (64%), Gaps = 4/198 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KT+ E A RER++ L E +VMK + H +VVRLLG ++ +P VIME + G L+
Sbjct: 80 VAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLK 138
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
S+LRS R + NN SL+ + ++A GM +L++ +HRDLAARN ++ E
Sbjct: 139 SYLRSLRPE-MENNPVLAPPSLSK--MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 195
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG RD+ + Y + +G LP+RWM+PESL D +F+ SD+WSFGV++WEI
Sbjct: 196 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
Query: 205 VTLGSTPYPGMAAAEVMK 222
TL PY G++ +V++
Sbjct: 256 ATLAEQPYQGLSNEQVLR 273
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 174 bits (440), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 129/203 (63%), Gaps = 4/203 (1%)
Query: 20 EGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVP 79
E VAVKT+ E+A RER++ L E +VMK H +VVRLLG ++ +P V+ME +
Sbjct: 42 EAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMA 100
Query: 80 YGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARN 139
+G L+S+LRS R + N G+ T +++ ++A GM +L+++ +HRDLAARN
Sbjct: 101 HGDLKSYLRSLRPE--AENNPGRPPP-TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARN 157
Query: 140 VLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGV 199
++ + K+ DFG RD+ + + +G LP+RWMAPESL D +F+ SD+WSFGV
Sbjct: 158 CMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 217
Query: 200 LIWEIVTLGSTPYPGMAAAEVMK 222
++WEI +L PY G++ +V+K
Sbjct: 218 VLWEITSLAEQPYQGLSNEQVLK 240
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 174 bits (440), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 129/203 (63%), Gaps = 4/203 (1%)
Query: 20 EGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVP 79
E VAVKT+ E+A RER++ L E +VMK H +VVRLLG ++ +P V+ME +
Sbjct: 45 EAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMA 103
Query: 80 YGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARN 139
+G L+S+LRS R + N G+ T +++ ++A GM +L+++ +HRDLAARN
Sbjct: 104 HGDLKSYLRSLRPEA--ENNPGRPPP-TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARN 160
Query: 140 VLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGV 199
++ + K+ DFG RD+ + + +G LP+RWMAPESL D +F+ SD+WSFGV
Sbjct: 161 CMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 200 LIWEIVTLGSTPYPGMAAAEVMK 222
++WEI +L PY G++ +V+K
Sbjct: 221 VLWEITSLAEQPYQGLSNEQVLK 243
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 174 bits (440), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 126/198 (63%), Gaps = 4/198 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KT+ E A RER++ L E +VMK + H +VVRLLG ++ +P VIME + G L+
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLK 116
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
S+LRS R NN SL+ + ++A GM +L++ +HRDLAARN ++ E
Sbjct: 117 SYLRSLRPA-MANNPVLAPPSLSK--MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 173
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG RD+ + Y + +G LP+RWM+PESL D +F+ SD+WSFGV++WEI
Sbjct: 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
Query: 205 VTLGSTPYPGMAAAEVMK 222
TL PY G++ +V++
Sbjct: 234 ATLAEQPYQGLSNEQVLR 251
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 174 bits (440), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 129/203 (63%), Gaps = 4/203 (1%)
Query: 20 EGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVP 79
E VAVKT+ E+A RER++ L E +VMK H +VVRLLG ++ +P V+ME +
Sbjct: 45 EAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMA 103
Query: 80 YGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARN 139
+G L+S+LRS R + N G+ T +++ ++A GM +L+++ +HRDLAARN
Sbjct: 104 HGDLKSYLRSLRPE--AENNPGRPPP-TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARN 160
Query: 140 VLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGV 199
++ + K+ DFG RD+ + + +G LP+RWMAPESL D +F+ SD+WSFGV
Sbjct: 161 CMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 200 LIWEIVTLGSTPYPGMAAAEVMK 222
++WEI +L PY G++ +V+K
Sbjct: 221 VLWEITSLAEQPYQGLSNEQVLK 243
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 173 bits (439), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 126/198 (63%), Gaps = 4/198 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KT+ E A RER++ L E +VMK + H +VVRLLG ++ +P VIME + G L+
Sbjct: 48 VAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLK 106
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
S+LRS R NN SL+ + ++A GM +L++ +HRDLAARN ++ E
Sbjct: 107 SYLRSLRPA-MANNPVLAPPSLSK--MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 163
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG RD+ + Y + +G LP+RWM+PESL D +F+ SD+WSFGV++WEI
Sbjct: 164 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
Query: 205 VTLGSTPYPGMAAAEVMK 222
TL PY G++ +V++
Sbjct: 224 ATLAEQPYQGLSNEQVLR 241
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 173 bits (438), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 126/198 (63%), Gaps = 4/198 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KT+ E A RER++ L E +VMK + H +VVRLLG ++ +P VIME + G L+
Sbjct: 45 VAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLK 103
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
S+LRS R + NN SL+ + ++A GM +L++ +HRDLAARN + E
Sbjct: 104 SYLRSLRPE-MENNPVLAPPSLSK--MIQMAGEIADGMAYLNANKFVHRDLAARNCXVAE 160
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG RD+ + Y + +G LP+RWM+PESL D +F+ SD+WSFGV++WEI
Sbjct: 161 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
Query: 205 VTLGSTPYPGMAAAEVMK 222
TL PY G++ +V++
Sbjct: 221 ATLAEQPYQGLSNEQVLR 238
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 172 bits (435), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 126/198 (63%), Gaps = 4/198 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KT+ E A RER++ L E +VMK + H +VVRLLG ++ +P VIME + G L+
Sbjct: 43 VAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLK 101
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
S+LRS R + NN SL+ + ++A GM +L++ +HRDLAARN ++ E
Sbjct: 102 SYLRSLRPE-MENNPVLAPPSLSK--MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 158
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG RD+ + + +G LP+RWM+PESL D +F+ SD+WSFGV++WEI
Sbjct: 159 DFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
Query: 205 VTLGSTPYPGMAAAEVMK 222
TL PY G++ +V++
Sbjct: 219 ATLAEQPYQGLSNEQVLR 236
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 172 bits (435), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 126/198 (63%), Gaps = 4/198 (2%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KT+ E A RER++ L E +VMK + H +VVRLLG ++ +P VIME + G L+
Sbjct: 52 VAIKTVNEAASMRERIEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLK 110
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
S+LRS R + NN SL+ + ++A GM +L++ +HRDLAARN ++ E
Sbjct: 111 SYLRSLRPE-MENNPVLAPPSLSK--MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 167
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG RD+ + + +G LP+RWM+PESL D +F+ SD+WSFGV++WEI
Sbjct: 168 DFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
Query: 205 VTLGSTPYPGMAAAEVMK 222
TL PY G++ +V++
Sbjct: 228 ATLAEQPYQGLSNEQVLR 245
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 164 bits (414), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 121/209 (57%), Gaps = 12/209 (5%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
+VAVK LKE A + D +E +M D +PN+V+LLG C +P ++ EY+ YG L
Sbjct: 79 MVAVKMLKEEASADMQADFQREAALMAEFD-NPNIVKLLGVCAVGKPMCLLFEYMAYGDL 137
Query: 84 QSFLRSSRAQRYYNNMHGKSNS-----------LTSRDLTSFCYQVARGMQFLSSRGIIH 132
FLRS + H ++ L+ + QVA GM +LS R +H
Sbjct: 138 NEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVH 197
Query: 133 RDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKS 192
RDLA RN L+GEN K+ADFG +R++ ++ Y+ +PIRWM PES++ N ++ +S
Sbjct: 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTES 257
Query: 193 DIWSFGVLIWEIVTLGSTPYPGMAAAEVM 221
D+W++GV++WEI + G PY GMA EV+
Sbjct: 258 DVWAYGVVLWEIFSYGLQPYYGMAHEEVI 286
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 160 bits (406), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 132/249 (53%), Gaps = 54/249 (21%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKE-PFFVIME------- 76
VAVK LKE A E L+ EL ++ + H NVV LLG CT+ P VI+E
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 77 ----------YVPYGKLQSFLRSSR-----------------------------AQRYYN 97
+VPY + R + ++ +
Sbjct: 120 STYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLS 179
Query: 98 NMHGKS-------NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKV 150
++ + + LT L + +QVA+GM+FL+SR IHRDLAARN+L+ E + K+
Sbjct: 180 DVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 239
Query: 151 ADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGST 210
DFG ARD+ Y RK + RLP++WMAPE+++D +++++SD+WSFGVL+WEI +LG++
Sbjct: 240 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 299
Query: 211 PYPGMAAAE 219
PYPG+ E
Sbjct: 300 PYPGVKIDE 308
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 160 bits (406), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 132/249 (53%), Gaps = 54/249 (21%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKE-PFFVIME------- 76
VAVK LKE A E L+ EL ++ + H NVV LLG CT+ P VI+E
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 77 ----------YVPYGKLQSFLRSSR-----------------------------AQRYYN 97
+VPY + R + ++ +
Sbjct: 122 STYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLS 181
Query: 98 NMHGKS-------NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKV 150
++ + + LT L + +QVA+GM+FL+SR IHRDLAARN+L+ E + K+
Sbjct: 182 DVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 241
Query: 151 ADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGST 210
DFG ARD+ Y RK + RLP++WMAPE+++D +++++SD+WSFGVL+WEI +LG++
Sbjct: 242 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 301
Query: 211 PYPGMAAAE 219
PYPG+ E
Sbjct: 302 PYPGVKIDE 310
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 160 bits (406), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 132/249 (53%), Gaps = 54/249 (21%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKE-PFFVIME------- 76
VAVK LKE A E L+ EL ++ + H NVV LLG CT+ P VI+E
Sbjct: 53 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 112
Query: 77 ----------YVPYGKLQSFLRSSR-----------------------------AQRYYN 97
+VPY + R + ++ +
Sbjct: 113 STYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLS 172
Query: 98 NMHGKS-------NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKV 150
++ + + LT L + +QVA+GM+FL+SR IHRDLAARN+L+ E + K+
Sbjct: 173 DVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 232
Query: 151 ADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGST 210
DFG ARD+ Y RK + RLP++WMAPE+++D +++++SD+WSFGVL+WEI +LG++
Sbjct: 233 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 292
Query: 211 PYPGMAAAE 219
PYPG+ E
Sbjct: 293 PYPGVKIDE 301
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 160 bits (406), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 132/249 (53%), Gaps = 54/249 (21%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKE-PFFVIME------- 76
VAVK LKE A E L+ EL ++ + H NVV LLG CT+ P VI+E
Sbjct: 55 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 114
Query: 77 ----------YVPYGKLQSFLRSSR-----------------------------AQRYYN 97
+VPY + R + ++ +
Sbjct: 115 STYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLS 174
Query: 98 NMHGKS-------NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKV 150
++ + + LT L + +QVA+GM+FL+SR IHRDLAARN+L+ E + K+
Sbjct: 175 DVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 234
Query: 151 ADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGST 210
DFG ARD+ Y RK + RLP++WMAPE+++D +++++SD+WSFGVL+WEI +LG++
Sbjct: 235 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 294
Query: 211 PYPGMAAAE 219
PYPG+ E
Sbjct: 295 PYPGVKIDE 303
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 158 bits (399), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 118/200 (59%), Gaps = 16/200 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KTLK E++R D L E ++M D HPN++RL G T+ +P ++ EY+ G L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
SFLR AQ T L +A GM++LS G +HRDLAARN+LI
Sbjct: 135 SFLRKHDAQ------------FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 145 NHCCKVADFGFARDLMTS--SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
N CKV+DFG AR L + Y + G++PIRW +PE++ F+ SD+WS+G+++W
Sbjct: 183 NLVCKVSDFGLARVLEDDPEAAYTTRG-GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 203 EIVTLGSTPYPGMAAAEVMK 222
E+++ G PY M+ +V+K
Sbjct: 242 EVMSYGERPYWEMSNQDVIK 261
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 157 bits (398), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 118/204 (57%), Gaps = 10/204 (4%)
Query: 22 PCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
P VAVKTL E E++ LD L E ++ L+ H N+VR +G + P F+++E + G
Sbjct: 61 PLQVAVKTLPEVCSEQDELDFLMEALIISKLN-HQNIVRCIGVSLQSLPRFILLELMAGG 119
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L+SFLR +R + + +SL DL +A G Q+L IHRD+AARN L
Sbjct: 120 DLKSFLRETRPR------PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCL 173
Query: 142 I---GENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFG 198
+ G K+ DFG ARD+ +S Y + LP++WM PE+ + IF+ K+D WSFG
Sbjct: 174 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 233
Query: 199 VLIWEIVTLGSTPYPGMAAAEVMK 222
VL+WEI +LG PYP + EV++
Sbjct: 234 VLLWEIFSLGYMPYPSKSNQEVLE 257
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 157 bits (398), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 118/204 (57%), Gaps = 10/204 (4%)
Query: 22 PCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
P VAVKTL E E++ LD L E ++ L+ H N+VR +G + P F+++E + G
Sbjct: 75 PLQVAVKTLPEVCSEQDELDFLMEALIISKLN-HQNIVRCIGVSLQSLPRFILLELMAGG 133
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L+SFLR +R + + +SL DL +A G Q+L IHRD+AARN L
Sbjct: 134 DLKSFLRETRPR------PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCL 187
Query: 142 I---GENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFG 198
+ G K+ DFG ARD+ +S Y + LP++WM PE+ + IF+ K+D WSFG
Sbjct: 188 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 247
Query: 199 VLIWEIVTLGSTPYPGMAAAEVMK 222
VL+WEI +LG PYP + EV++
Sbjct: 248 VLLWEIFSLGYMPYPSKSNQEVLE 271
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 157 bits (398), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 117/204 (57%), Gaps = 10/204 (4%)
Query: 22 PCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
P VAVKTL E E++ LD L E ++ + H N+VR +G + P F++ME + G
Sbjct: 75 PLQVAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILMELMAGG 133
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L+SFLR +R + + +SL DL +A G Q+L IHRD+AARN L
Sbjct: 134 DLKSFLRETRPR------PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCL 187
Query: 142 I---GENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFG 198
+ G K+ DFG ARD+ +S Y + LP++WM PE+ + IF+ K+D WSFG
Sbjct: 188 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 247
Query: 199 VLIWEIVTLGSTPYPGMAAAEVMK 222
VL+WEI +LG PYP + EV++
Sbjct: 248 VLLWEIFSLGYMPYPSKSNQEVLE 271
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 157 bits (398), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 117/204 (57%), Gaps = 10/204 (4%)
Query: 22 PCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
P VAVKTL E E++ LD L E ++ + H N+VR +G + P F++ME + G
Sbjct: 60 PLQVAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILMELMAGG 118
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L+SFLR +R + + +SL DL +A G Q+L IHRD+AARN L
Sbjct: 119 DLKSFLRETRPR------PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCL 172
Query: 142 I---GENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFG 198
+ G K+ DFG ARD+ +S Y + LP++WM PE+ + IF+ K+D WSFG
Sbjct: 173 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 232
Query: 199 VLIWEIVTLGSTPYPGMAAAEVMK 222
VL+WEI +LG PYP + EV++
Sbjct: 233 VLLWEIFSLGYMPYPSKSNQEVLE 256
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 157 bits (397), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 118/200 (59%), Gaps = 16/200 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KTLK E++R D L E ++M D HPN++RL G T+ +P ++ EY+ G L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
SFLR AQ T L +A GM++LS G +HRDLAARN+LI
Sbjct: 135 SFLRKHDAQ------------FTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINS 182
Query: 145 NHCCKVADFGFARDLMTS--SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
N CKV+DFG +R L + Y + G++PIRW +PE++ F+ SD+WS+G+++W
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRG-GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 203 EIVTLGSTPYPGMAAAEVMK 222
E+++ G PY M+ +V+K
Sbjct: 242 EVMSYGERPYWEMSNQDVIK 261
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 157 bits (397), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 118/200 (59%), Gaps = 16/200 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KTLK E++R D L E ++M D HPN++RL G T+ +P ++ EY+ G L
Sbjct: 64 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLD 122
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
SFLR AQ T L +A GM++LS G +HRDLAARN+LI
Sbjct: 123 SFLRKHDAQ------------FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 170
Query: 145 NHCCKVADFGFARDLMTS--SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
N CKV+DFG +R L + Y + G++PIRW +PE++ F+ SD+WS+G+++W
Sbjct: 171 NLVCKVSDFGLSRVLEDDPEAAYTTRG-GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 229
Query: 203 EIVTLGSTPYPGMAAAEVMK 222
E+++ G PY M+ +V+K
Sbjct: 230 EVMSYGERPYWEMSNQDVIK 249
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 157 bits (397), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 118/200 (59%), Gaps = 16/200 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KTLK E++R D L E ++M D HPN++RL G T+ +P ++ EY+ G L
Sbjct: 74 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLD 132
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
SFLR AQ T L +A GM++LS G +HRDLAARN+LI
Sbjct: 133 SFLRKHDAQ------------FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 180
Query: 145 NHCCKVADFGFARDLMTS--SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
N CKV+DFG +R L + Y + G++PIRW +PE++ F+ SD+WS+G+++W
Sbjct: 181 NLVCKVSDFGLSRVLEDDPEAAYTTRG-GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 239
Query: 203 EIVTLGSTPYPGMAAAEVMK 222
E+++ G PY M+ +V+K
Sbjct: 240 EVMSYGERPYWEMSNQDVIK 259
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 157 bits (396), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 118/200 (59%), Gaps = 16/200 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KTLK E++R D L E ++M D HPN++RL G T+ +P ++ EY+ G L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
SFLR AQ T L +A GM++LS G +HRDLAARN+LI
Sbjct: 135 SFLRKHDAQ------------FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 145 NHCCKVADFGFARDLMTS--SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
N CKV+DFG +R L + Y + G++PIRW +PE++ F+ SD+WS+G+++W
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRG-GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 203 EIVTLGSTPYPGMAAAEVMK 222
E+++ G PY M+ +V+K
Sbjct: 242 EVMSYGERPYWEMSNQDVIK 261
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 157 bits (396), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 118/200 (59%), Gaps = 16/200 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KTLK E++R D L E ++M D HPN++RL G T+ +P ++ EY+ G L
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLD 105
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
SFLR AQ T L +A GM++LS G +HRDLAARN+LI
Sbjct: 106 SFLRKHDAQ------------FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 153
Query: 145 NHCCKVADFGFARDLMTS--SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
N CKV+DFG +R L + Y + G++PIRW +PE++ F+ SD+WS+G+++W
Sbjct: 154 NLVCKVSDFGLSRVLEDDPEAAYTTRG-GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 212
Query: 203 EIVTLGSTPYPGMAAAEVMK 222
E+++ G PY M+ +V+K
Sbjct: 213 EVMSYGERPYWEMSNQDVIK 232
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 157 bits (396), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 118/200 (59%), Gaps = 16/200 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KTLK E++R D L E ++M D HPN++RL G T+ +P ++ EY+ G L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
SFLR AQ T L +A GM++LS G +HRDLAARN+LI
Sbjct: 135 SFLRKHDAQ------------FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 145 NHCCKVADFGFARDLMTS--SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
N CKV+DFG +R L + Y + G++PIRW +PE++ F+ SD+WS+G+++W
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRG-GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 203 EIVTLGSTPYPGMAAAEVMK 222
E+++ G PY M+ +V+K
Sbjct: 242 EVMSYGERPYWEMSNQDVIK 261
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 157 bits (396), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 118/200 (59%), Gaps = 16/200 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KTLK E++R D L E ++M D HPN++RL G T+ +P ++ EY+ G L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
SFLR AQ T L +A GM++LS G +HRDLAARN+LI
Sbjct: 135 SFLRKHDAQ------------FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 145 NHCCKVADFGFARDLMTS--SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
N CKV+DFG +R L + Y + G++PIRW +PE++ F+ SD+WS+G+++W
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRG-GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 203 EIVTLGSTPYPGMAAAEVMK 222
E+++ G PY M+ +V+K
Sbjct: 242 EVMSYGERPYWEMSNQDVIK 261
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 157 bits (396), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 118/200 (59%), Gaps = 16/200 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KTLK E++R D L E ++M D HPN++RL G T+ +P ++ EY+ G L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
SFLR AQ T L +A GM++LS G +HRDLAARN+LI
Sbjct: 135 SFLRKHDAQ------------FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 145 NHCCKVADFGFARDLMTS--SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
N CKV+DFG +R L + Y + G++PIRW +PE++ F+ SD+WS+G+++W
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRG-GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 203 EIVTLGSTPYPGMAAAEVMK 222
E+++ G PY M+ +V+K
Sbjct: 242 EVMSYGERPYWEMSNQDVIK 261
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 157 bits (396), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 117/200 (58%), Gaps = 16/200 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KTLK E++R D L E ++M D HPN++RL G T+ +P ++ EY+ G L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
SFLR AQ T L +A GM++LS G +HRDLAARN+LI
Sbjct: 135 SFLRKHDAQ------------FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 145 NHCCKVADFGFARDLMTS--SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
N CKV+DFG R L + Y + G++PIRW +PE++ F+ SD+WS+G+++W
Sbjct: 183 NLVCKVSDFGLGRVLEDDPEAAYTTRG-GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 203 EIVTLGSTPYPGMAAAEVMK 222
E+++ G PY M+ +V+K
Sbjct: 242 EVMSYGERPYWEMSNQDVIK 261
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 156 bits (395), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 117/204 (57%), Gaps = 10/204 (4%)
Query: 22 PCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
P VAVKTL E E++ LD L E ++ + H N+VR +G + P F+++E + G
Sbjct: 87 PLQVAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGG 145
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L+SFLR +R + + +SL DL +A G Q+L IHRD+AARN L
Sbjct: 146 DLKSFLRETRPR------PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCL 199
Query: 142 I---GENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFG 198
+ G K+ DFG ARD+ +S Y + LP++WM PE+ + IF+ K+D WSFG
Sbjct: 200 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 259
Query: 199 VLIWEIVTLGSTPYPGMAAAEVMK 222
VL+WEI +LG PYP + EV++
Sbjct: 260 VLLWEIFSLGYMPYPSKSNQEVLE 283
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 156 bits (395), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 117/204 (57%), Gaps = 10/204 (4%)
Query: 22 PCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
P VAVKTL E E++ LD L E ++ + H N+VR +G + P F+++E + G
Sbjct: 77 PLQVAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGG 135
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L+SFLR +R + + +SL DL +A G Q+L IHRD+AARN L
Sbjct: 136 DLKSFLRETRPR------PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCL 189
Query: 142 I---GENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFG 198
+ G K+ DFG ARD+ +S Y + LP++WM PE+ + IF+ K+D WSFG
Sbjct: 190 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 249
Query: 199 VLIWEIVTLGSTPYPGMAAAEVMK 222
VL+WEI +LG PYP + EV++
Sbjct: 250 VLLWEIFSLGYMPYPSKSNQEVLE 273
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 156 bits (395), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 117/204 (57%), Gaps = 10/204 (4%)
Query: 22 PCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
P VAVKTL E E++ LD L E ++ + H N+VR +G + P F+++E + G
Sbjct: 67 PLQVAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGG 125
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L+SFLR +R + + +SL DL +A G Q+L IHRD+AARN L
Sbjct: 126 DLKSFLRETRPR------PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCL 179
Query: 142 I---GENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFG 198
+ G K+ DFG ARD+ +S Y + LP++WM PE+ + IF+ K+D WSFG
Sbjct: 180 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 239
Query: 199 VLIWEIVTLGSTPYPGMAAAEVMK 222
VL+WEI +LG PYP + EV++
Sbjct: 240 VLLWEIFSLGYMPYPSKSNQEVLE 263
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 156 bits (394), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 117/204 (57%), Gaps = 10/204 (4%)
Query: 22 PCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
P VAVKTL E E++ LD L E ++ + H N+VR +G + P F+++E + G
Sbjct: 60 PLQVAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGG 118
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L+SFLR +R + + +SL DL +A G Q+L IHRD+AARN L
Sbjct: 119 DLKSFLRETRPR------PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCL 172
Query: 142 I---GENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFG 198
+ G K+ DFG ARD+ +S Y + LP++WM PE+ + IF+ K+D WSFG
Sbjct: 173 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 232
Query: 199 VLIWEIVTLGSTPYPGMAAAEVMK 222
VL+WEI +LG PYP + EV++
Sbjct: 233 VLLWEIFSLGYMPYPSKSNQEVLE 256
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 117/204 (57%), Gaps = 10/204 (4%)
Query: 22 PCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
P VAVKTL E E++ LD L E ++ + H N+VR +G + P F+++E + G
Sbjct: 61 PLQVAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGG 119
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L+SFLR +R + + +SL DL +A G Q+L IHRD+AARN L
Sbjct: 120 DLKSFLRETRPR------PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCL 173
Query: 142 I---GENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFG 198
+ G K+ DFG ARD+ +S Y + LP++WM PE+ + IF+ K+D WSFG
Sbjct: 174 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 233
Query: 199 VLIWEIVTLGSTPYPGMAAAEVMK 222
VL+WEI +LG PYP + EV++
Sbjct: 234 VLLWEIFSLGYMPYPSKSNQEVLE 257
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 117/204 (57%), Gaps = 10/204 (4%)
Query: 22 PCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
P VAVKTL E E++ LD L E ++ + H N+VR +G + P F+++E + G
Sbjct: 52 PLQVAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGG 110
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L+SFLR +R + + +SL DL +A G Q+L IHRD+AARN L
Sbjct: 111 DLKSFLRETRPR------PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCL 164
Query: 142 I---GENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFG 198
+ G K+ DFG ARD+ +S Y + LP++WM PE+ + IF+ K+D WSFG
Sbjct: 165 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 224
Query: 199 VLIWEIVTLGSTPYPGMAAAEVMK 222
VL+WEI +LG PYP + EV++
Sbjct: 225 VLLWEIFSLGYMPYPSKSNQEVLE 248
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 155 bits (393), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 117/204 (57%), Gaps = 10/204 (4%)
Query: 22 PCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
P VAVKTL E E++ LD L E ++ + H N+VR +G + P F+++E + G
Sbjct: 75 PLQVAVKTLPEVYSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGG 133
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L+SFLR +R + + +SL DL +A G Q+L IHRD+AARN L
Sbjct: 134 DLKSFLRETRPR------PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCL 187
Query: 142 I---GENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFG 198
+ G K+ DFG ARD+ +S Y + LP++WM PE+ + IF+ K+D WSFG
Sbjct: 188 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 247
Query: 199 VLIWEIVTLGSTPYPGMAAAEVMK 222
VL+WEI +LG PYP + EV++
Sbjct: 248 VLLWEIFSLGYMPYPSKSNQEVLE 271
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 155 bits (391), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 116/204 (56%), Gaps = 10/204 (4%)
Query: 22 PCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
P VAVKTL E E++ LD L E ++ + H N+VR +G + P F+++E + G
Sbjct: 101 PLQVAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGG 159
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L+SFLR +R + + +SL DL +A G Q+L IHRD+AARN L
Sbjct: 160 DLKSFLRETRPR------PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCL 213
Query: 142 I---GENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFG 198
+ G K+ DFG ARD+ + Y + LP++WM PE+ + IF+ K+D WSFG
Sbjct: 214 LTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 273
Query: 199 VLIWEIVTLGSTPYPGMAAAEVMK 222
VL+WEI +LG PYP + EV++
Sbjct: 274 VLLWEIFSLGYMPYPSKSNQEVLE 297
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 155 bits (391), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 116/204 (56%), Gaps = 10/204 (4%)
Query: 22 PCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
P VAVKTL E E++ LD L E ++ + H N+VR +G + P F+++E + G
Sbjct: 78 PLQVAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGG 136
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L+SFLR +R + + +SL DL +A G Q+L IHRD+AARN L
Sbjct: 137 DLKSFLRETRPR------PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCL 190
Query: 142 I---GENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFG 198
+ G K+ DFG ARD+ + Y + LP++WM PE+ + IF+ K+D WSFG
Sbjct: 191 LTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 250
Query: 199 VLIWEIVTLGSTPYPGMAAAEVMK 222
VL+WEI +LG PYP + EV++
Sbjct: 251 VLLWEIFSLGYMPYPSKSNQEVLE 274
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 154 bits (390), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 117/204 (57%), Gaps = 10/204 (4%)
Query: 22 PCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
P VAVKTL E E++ LD L E ++ + H N+VR +G + P F+++E + G
Sbjct: 61 PLQVAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGG 119
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L+SFLR +R + + +SL DL +A G Q+L IHRD+AARN L
Sbjct: 120 DLKSFLRETRPR------PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCL 173
Query: 142 I---GENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFG 198
+ G K+ DFG A+D+ +S Y + LP++WM PE+ + IF+ K+D WSFG
Sbjct: 174 LTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 233
Query: 199 VLIWEIVTLGSTPYPGMAAAEVMK 222
VL+WEI +LG PYP + EV++
Sbjct: 234 VLLWEIFSLGYMPYPSKSNQEVLE 257
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 154 bits (388), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 117/200 (58%), Gaps = 16/200 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KTLK E++R D L E ++M D HPN++RL G T+ +P ++ E + G L
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEXMENGSLD 105
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
SFLR AQ T L +A GM++LS G +HRDLAARN+LI
Sbjct: 106 SFLRKHDAQ------------FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 153
Query: 145 NHCCKVADFGFARDLMTS--SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
N CKV+DFG +R L + Y + G++PIRW +PE++ F+ SD+WS+G+++W
Sbjct: 154 NLVCKVSDFGLSRVLEDDPEAAYTTRG-GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 212
Query: 203 EIVTLGSTPYPGMAAAEVMK 222
E+++ G PY M+ +V+K
Sbjct: 213 EVMSYGERPYWEMSNQDVIK 232
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 154 bits (388), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 117/200 (58%), Gaps = 16/200 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KTLK E++R D L E ++M D HPN++RL G T+ +P ++ E + G L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
SFLR AQ T L +A GM++LS G +HRDLAARN+LI
Sbjct: 135 SFLRKHDAQ------------FTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINS 182
Query: 145 NHCCKVADFGFARDLMTS--SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
N CKV+DFG +R L + Y + G++PIRW +PE++ F+ SD+WS+G+++W
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRG-GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 203 EIVTLGSTPYPGMAAAEVMK 222
E+++ G PY M+ +V+K
Sbjct: 242 EVMSYGERPYWEMSNQDVIK 261
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 154 bits (388), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 117/200 (58%), Gaps = 16/200 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KTLK E++R D L E ++M D HPN++RL G T+ +P ++ E + G L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
SFLR AQ T L +A GM++LS G +HRDLAARN+LI
Sbjct: 135 SFLRKHDAQ------------FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 145 NHCCKVADFGFARDLMTS--SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
N CKV+DFG +R L + Y + G++PIRW +PE++ F+ SD+WS+G+++W
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRG-GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 203 EIVTLGSTPYPGMAAAEVMK 222
E+++ G PY M+ +V+K
Sbjct: 242 EVMSYGERPYWEMSNQDVIK 261
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 153 bits (387), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 118/210 (56%), Gaps = 5/210 (2%)
Query: 13 MSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFF 72
+ PE+ + +VAVKTLK+ A + R D +E ++ L H ++V+ G C E +P
Sbjct: 37 LCPEQDK---ILVAVKTLKD-ASDNARKDFHREAELLTNLQ-HEHIVKFYGVCVEGDPLI 91
Query: 73 VIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIH 132
++ EY+ +G L FLR+ LT + Q+A GM +L+S+ +H
Sbjct: 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVH 151
Query: 133 RDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKS 192
RDLA RN L+GEN K+ DFG +RD+ ++ Y LPIRWM PES+ F+ +S
Sbjct: 152 RDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTES 211
Query: 193 DIWSFGVLIWEIVTLGSTPYPGMAAAEVMK 222
D+WS GV++WEI T G P+ ++ EV++
Sbjct: 212 DVWSLGVVLWEIFTYGKQPWYQLSNNEVIE 241
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 112/201 (55%), Gaps = 16/201 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KTLK E++R D L E ++M D HPNV+ L G T+ P +I E++ G L
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFD-HPNVIHLEGVVTKSTPVMIITEFMENGSLD 122
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
SFLR + Q T L +A GM++L+ +HRDLAARN+L+
Sbjct: 123 SFLRQNDGQ------------FTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNS 170
Query: 145 NHCCKVADFGFAR---DLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
N CKV+DFG +R D + Y G++PIRW APE++ F+ SD+WS+G+++
Sbjct: 171 NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVM 230
Query: 202 WEIVTLGSTPYPGMAAAEVMK 222
WE+++ G PY M +V+
Sbjct: 231 WEVMSYGERPYWDMTNQDVIN 251
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 119/206 (57%), Gaps = 18/206 (8%)
Query: 19 REGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYV 78
RE P VA+KTLK E++R D L E ++M D HPN++ L G T+ +P ++ EY+
Sbjct: 49 RELP--VAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIHLEGVVTKSKPVMIVTEYM 105
Query: 79 PYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAAR 138
G L +FL+ + Q T L ++ GM++LS G +HRDLAAR
Sbjct: 106 ENGSLDTFLKKNDGQ------------FTVIQLVGMLRGISAGMKYLSDMGYVHRDLAAR 153
Query: 139 NVLIGENHCCKVADFGFARDLMTS--SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWS 196
N+LI N CKV+DFG +R L + Y + G++PIRW APE++ F+ SD+WS
Sbjct: 154 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG-GKIPIRWTAPEAIAFRKFTSASDVWS 212
Query: 197 FGVLIWEIVTLGSTPYPGMAAAEVMK 222
+G+++WE+V+ G PY M +V+K
Sbjct: 213 YGIVMWEVVSYGERPYWEMTNQDVIK 238
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 152 bits (384), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 120/199 (60%), Gaps = 18/199 (9%)
Query: 26 AVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKL 83
AVK+L E L E +MK HPNV+ LLG C +E P V++ Y+ +G L
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 118
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
++F+R+ ++++ T +DL F QVA+GM++L+S+ +HRDLAARN ++
Sbjct: 119 RNFIRN------------ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 166
Query: 144 ENHCCKVADFGFARDLMTSSVY--ERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
E KVADFG ARD+ Y K+ +LP++WMA ESL F+ KSD+WSFGVL+
Sbjct: 167 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 226
Query: 202 WEIVTLGSTPYPGMAAAEV 220
WE++T G+ PYP + ++
Sbjct: 227 WELMTRGAPPYPDVNTFDI 245
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 120/199 (60%), Gaps = 18/199 (9%)
Query: 26 AVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKL 83
AVK+L E L E +MK HPNV+ LLG C +E P V++ Y+ +G L
Sbjct: 81 AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 138
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
++F+R+ ++++ T +DL F QVA+GM++L+S+ +HRDLAARN ++
Sbjct: 139 RNFIRN------------ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 186
Query: 144 ENHCCKVADFGFARDLMTSSVY--ERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
E KVADFG ARD+ Y K+ +LP++WMA ESL F+ KSD+WSFGVL+
Sbjct: 187 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 246
Query: 202 WEIVTLGSTPYPGMAAAEV 220
WE++T G+ PYP + ++
Sbjct: 247 WELMTRGAPPYPDVNTFDI 265
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 120/199 (60%), Gaps = 18/199 (9%)
Query: 26 AVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKL 83
AVK+L E L E +MK HPNV+ LLG C +E P V++ Y+ +G L
Sbjct: 59 AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 116
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
++F+R+ ++++ T +DL F QVA+GM++L+S+ +HRDLAARN ++
Sbjct: 117 RNFIRN------------ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 164
Query: 144 ENHCCKVADFGFARDLMTSSVY--ERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
E KVADFG ARD+ Y K+ +LP++WMA ESL F+ KSD+WSFGVL+
Sbjct: 165 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 224
Query: 202 WEIVTLGSTPYPGMAAAEV 220
WE++T G+ PYP + ++
Sbjct: 225 WELMTRGAPPYPDVNTFDI 243
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 120/199 (60%), Gaps = 18/199 (9%)
Query: 26 AVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKL 83
AVK+L E L E +MK HPNV+ LLG C +E P V++ Y+ +G L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 119
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
++F+R+ ++++ T +DL F QVA+GM++L+S+ +HRDLAARN ++
Sbjct: 120 RNFIRN------------ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 167
Query: 144 ENHCCKVADFGFARDLMTSSVY--ERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
E KVADFG ARD+ Y K+ +LP++WMA ESL F+ KSD+WSFGVL+
Sbjct: 168 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 227
Query: 202 WEIVTLGSTPYPGMAAAEV 220
WE++T G+ PYP + ++
Sbjct: 228 WELMTRGAPPYPDVNTFDI 246
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 120/199 (60%), Gaps = 18/199 (9%)
Query: 26 AVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKL 83
AVK+L E L E +MK HPNV+ LLG C +E P V++ Y+ +G L
Sbjct: 80 AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 137
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
++F+R+ ++++ T +DL F QVA+GM++L+S+ +HRDLAARN ++
Sbjct: 138 RNFIRN------------ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 185
Query: 144 ENHCCKVADFGFARDLMTSSVY--ERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
E KVADFG ARD+ Y K+ +LP++WMA ESL F+ KSD+WSFGVL+
Sbjct: 186 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 245
Query: 202 WEIVTLGSTPYPGMAAAEV 220
WE++T G+ PYP + ++
Sbjct: 246 WELMTRGAPPYPDVNTFDI 264
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 120/199 (60%), Gaps = 18/199 (9%)
Query: 26 AVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKL 83
AVK+L E L E +MK HPNV+ LLG C +E P V++ Y+ +G L
Sbjct: 54 AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 111
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
++F+R+ ++++ T +DL F QVA+GM++L+S+ +HRDLAARN ++
Sbjct: 112 RNFIRN------------ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 159
Query: 144 ENHCCKVADFGFARDLMTSSVY--ERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
E KVADFG ARD+ Y K+ +LP++WMA ESL F+ KSD+WSFGVL+
Sbjct: 160 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 219
Query: 202 WEIVTLGSTPYPGMAAAEV 220
WE++T G+ PYP + ++
Sbjct: 220 WELMTRGAPPYPDVNTFDI 238
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 120/199 (60%), Gaps = 18/199 (9%)
Query: 26 AVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKL 83
AVK+L E L E +MK HPNV+ LLG C +E P V++ Y+ +G L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 119
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
++F+R+ ++++ T +DL F QVA+GM++L+S+ +HRDLAARN ++
Sbjct: 120 RNFIRN------------ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 167
Query: 144 ENHCCKVADFGFARDLMTSSVY--ERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
E KVADFG ARD+ Y K+ +LP++WMA ESL F+ KSD+WSFGVL+
Sbjct: 168 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 227
Query: 202 WEIVTLGSTPYPGMAAAEV 220
WE++T G+ PYP + ++
Sbjct: 228 WELMTRGAPPYPDVNTFDI 246
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 120/199 (60%), Gaps = 18/199 (9%)
Query: 26 AVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKL 83
AVK+L E L E +MK HPNV+ LLG C +E P V++ Y+ +G L
Sbjct: 57 AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 114
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
++F+R+ ++++ T +DL F QVA+GM++L+S+ +HRDLAARN ++
Sbjct: 115 RNFIRN------------ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 162
Query: 144 ENHCCKVADFGFARDLMTSSVY--ERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
E KVADFG ARD+ Y K+ +LP++WMA ESL F+ KSD+WSFGVL+
Sbjct: 163 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 222
Query: 202 WEIVTLGSTPYPGMAAAEV 220
WE++T G+ PYP + ++
Sbjct: 223 WELMTRGAPPYPDVNTFDI 241
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 120/199 (60%), Gaps = 18/199 (9%)
Query: 26 AVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKL 83
AVK+L E L E +MK HPNV+ LLG C +E P V++ Y+ +G L
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 117
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
++F+R+ ++++ T +DL F QVA+GM++L+S+ +HRDLAARN ++
Sbjct: 118 RNFIRN------------ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 165
Query: 144 ENHCCKVADFGFARDLMTSSVY--ERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
E KVADFG ARD+ Y K+ +LP++WMA ESL F+ KSD+WSFGVL+
Sbjct: 166 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 225
Query: 202 WEIVTLGSTPYPGMAAAEV 220
WE++T G+ PYP + ++
Sbjct: 226 WELMTRGAPPYPDVNTFDI 244
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 120/199 (60%), Gaps = 18/199 (9%)
Query: 26 AVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKL 83
AVK+L E L E +MK HPNV+ LLG C +E P V++ Y+ +G L
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 120
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
++F+R+ ++++ T +DL F QVA+GM+FL+S+ +HRDLAARN ++
Sbjct: 121 RNFIRN------------ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 168
Query: 144 ENHCCKVADFGFARDLMTSSV--YERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
E KVADFG ARD++ K+ +LP++WMA ESL F+ KSD+WSFGVL+
Sbjct: 169 EKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 228
Query: 202 WEIVTLGSTPYPGMAAAEV 220
WE++T G+ PYP + ++
Sbjct: 229 WELMTRGAPPYPDVNTFDI 247
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 113/197 (57%), Gaps = 15/197 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLK G L+E +MKTL H +VRL T +EP ++I EY+ G L
Sbjct: 40 VAVKTLK--PGTMSVQAFLEEANLMKTLQ-HDKLVRLYAVVTREEPIYIITEYMAKGSLL 96
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
FL+S + + L F Q+A GM ++ + IHRDL A NVL+ E
Sbjct: 97 DFLKSDEGGK-----------VLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSE 145
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ CK+ADFG AR ++ + Y + + PI+W APE++ F++KSD+WSFG+L++EI
Sbjct: 146 SLMCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEI 204
Query: 205 VTLGSTPYPGMAAAEVM 221
VT G PYPG A+VM
Sbjct: 205 VTYGKIPYPGRTNADVM 221
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 150 bits (380), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 119/199 (59%), Gaps = 18/199 (9%)
Query: 26 AVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKL 83
AVK+L E L E +MK HPNV+ LLG C +E P V++ Y+ +G L
Sbjct: 121 AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 178
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
++F+R+ ++++ T +DL F QVA+GM+FL+S+ +HRDLAARN ++
Sbjct: 179 RNFIRN------------ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 226
Query: 144 ENHCCKVADFGFARDLMTSSV--YERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
E KVADFG ARD+ K+ +LP++WMA ESL F+ KSD+WSFGVL+
Sbjct: 227 EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 286
Query: 202 WEIVTLGSTPYPGMAAAEV 220
WE++T G+ PYP + ++
Sbjct: 287 WELMTRGAPPYPDVNTFDI 305
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 150 bits (380), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 123/207 (59%), Gaps = 20/207 (9%)
Query: 18 GREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIM 75
G++ C AVK+L E L E +MK HPNV+ LLG C +E P V++
Sbjct: 54 GKKIHC--AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPL-VVL 109
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
Y+ +G L++F+R+ ++++ T +DL F QVA+GM+FL+S+ +HRDL
Sbjct: 110 PYMKHGDLRNFIRN------------ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDL 157
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSV--YERKSEGRLPIRWMAPESLYDNIFSVKSD 193
AARN ++ E KVADFG ARD+ K+ +LP++WMA ESL F+ KSD
Sbjct: 158 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 217
Query: 194 IWSFGVLIWEIVTLGSTPYPGMAAAEV 220
+WSFGVL+WE++T G+ PYP + ++
Sbjct: 218 VWSFGVLLWELMTRGAPPYPDVNTFDI 244
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 150 bits (380), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 119/199 (59%), Gaps = 18/199 (9%)
Query: 26 AVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKL 83
AVK+L E L E +MK HPNV+ LLG C +E P V++ Y+ +G L
Sbjct: 67 AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 124
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
++F+R+ ++++ T +DL F QVA+GM+FL+S+ +HRDLAARN ++
Sbjct: 125 RNFIRN------------ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 172
Query: 144 ENHCCKVADFGFARDLMTSSV--YERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
E KVADFG ARD+ K+ +LP++WMA ESL F+ KSD+WSFGVL+
Sbjct: 173 EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 232
Query: 202 WEIVTLGSTPYPGMAAAEV 220
WE++T G+ PYP + ++
Sbjct: 233 WELMTRGAPPYPDVNTFDI 251
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 150 bits (380), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 119/199 (59%), Gaps = 18/199 (9%)
Query: 26 AVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKL 83
AVK+L E L E +MK HPNV+ LLG C +E P V++ Y+ +G L
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 120
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
++F+R+ ++++ T +DL F QVA+GM+FL+S+ +HRDLAARN ++
Sbjct: 121 RNFIRN------------ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 168
Query: 144 ENHCCKVADFGFARDLMTSSV--YERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
E KVADFG ARD+ K+ +LP++WMA ESL F+ KSD+WSFGVL+
Sbjct: 169 EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 228
Query: 202 WEIVTLGSTPYPGMAAAEV 220
WE++T G+ PYP + ++
Sbjct: 229 WELMTRGAPPYPDVNTFDI 247
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 150 bits (380), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 119/199 (59%), Gaps = 18/199 (9%)
Query: 26 AVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKL 83
AVK+L E L E +MK HPNV+ LLG C +E P V++ Y+ +G L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 119
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
++F+R+ ++++ T +DL F QVA+GM+FL+S+ +HRDLAARN ++
Sbjct: 120 RNFIRN------------ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 167
Query: 144 ENHCCKVADFGFARDLMTSSV--YERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
E KVADFG ARD+ K+ +LP++WMA ESL F+ KSD+WSFGVL+
Sbjct: 168 EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 227
Query: 202 WEIVTLGSTPYPGMAAAEV 220
WE++T G+ PYP + ++
Sbjct: 228 WELMTRGAPPYPDVNTFDI 246
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 150 bits (380), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 119/199 (59%), Gaps = 18/199 (9%)
Query: 26 AVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKL 83
AVK+L E L E +MK HPNV+ LLG C +E P V++ Y+ +G L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 119
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
++F+R+ ++++ T +DL F QVA+GM+FL+S+ +HRDLAARN ++
Sbjct: 120 RNFIRN------------ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 167
Query: 144 ENHCCKVADFGFARDLMTSSV--YERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
E KVADFG ARD+ K+ +LP++WMA ESL F+ KSD+WSFGVL+
Sbjct: 168 EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 227
Query: 202 WEIVTLGSTPYPGMAAAEV 220
WE++T G+ PYP + ++
Sbjct: 228 WELMTRGAPPYPDVNTFDI 246
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 150 bits (379), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 108/198 (54%), Gaps = 14/198 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K LK ER+R D L E ++M D HPN++RL G T ++ EY+ G L
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFD-HPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+FLR+ Q T L V GM++LS G +HRDLAARNVL+
Sbjct: 139 TFLRTHDGQ------------FTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDS 186
Query: 145 NHCCKVADFGFARDLMTS-SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWE 203
N CKV+DFG +R L + G++PIRW APE++ FS SD+WSFGV++WE
Sbjct: 187 NLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWE 246
Query: 204 IVTLGSTPYPGMAAAEVM 221
++ G PY M +V+
Sbjct: 247 VLAYGERPYWNMTNRDVI 264
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 150 bits (378), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 119/202 (58%), Gaps = 14/202 (6%)
Query: 25 VAVKTLK-ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPF-----FVIMEYV 78
VAVKT+K +N+ +RE + L E MK HPNV+RLLG C E VI+ ++
Sbjct: 65 VAVKTMKLDNSSQREIEEFLSEAACMKDFS-HPNVIRLLGVCIEMSSQGIPKPMVILPFM 123
Query: 79 PYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAAR 138
YG L ++L Y+ + + + L F +A GM++LS+R +HRDLAAR
Sbjct: 124 KYGDLHTYL-------LYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAAR 176
Query: 139 NVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFG 198
N ++ ++ VADFG ++ + + Y + ++P++W+A ESL D +++ KSD+W+FG
Sbjct: 177 NCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFG 236
Query: 199 VLIWEIVTLGSTPYPGMAAAEV 220
V +WEI T G TPYPG+ E+
Sbjct: 237 VTMWEIATRGMTPYPGVQNHEM 258
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 150 bits (378), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 108/198 (54%), Gaps = 14/198 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K LK ER+R D L E ++M D HPN++RL G T ++ EY+ G L
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFD-HPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+FLR+ Q T L V GM++LS G +HRDLAARNVL+
Sbjct: 139 TFLRTHDGQ------------FTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDS 186
Query: 145 NHCCKVADFGFARDLMTS-SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWE 203
N CKV+DFG +R L + G++PIRW APE++ FS SD+WSFGV++WE
Sbjct: 187 NLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWE 246
Query: 204 IVTLGSTPYPGMAAAEVM 221
++ G PY M +V+
Sbjct: 247 VLAYGERPYWNMTNRDVI 264
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 150 bits (378), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 122/212 (57%), Gaps = 20/212 (9%)
Query: 13 MSPERGREGPCI-VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPF 71
MSPE P + VA+KT K + R LQE M+ D HP++V+L+G TE P
Sbjct: 412 MSPE----NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD-HPHIVKLIGVITEN-PV 465
Query: 72 FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGII 131
++IME G+L+SFL+ + SL L + YQ++ + +L S+ +
Sbjct: 466 WIIMELCTLGELRSFLQVRKF------------SLDLASLILYAYQLSTALAYLESKRFV 513
Query: 132 HRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVK 191
HRD+AARNVL+ N C K+ DFG +R M S Y + S+G+LPI+WMAPES+ F+
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 572
Query: 192 SDIWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
SD+W FGV +WEI+ G P+ G+ +V+ +
Sbjct: 573 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 604
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 150 bits (378), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 124/212 (58%), Gaps = 20/212 (9%)
Query: 13 MSPERGREGPCI-VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPF 71
MSPE P + VA+KT K + R LQE M+ D HP++V+L+G TE P
Sbjct: 60 MSPE----NPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD-HPHIVKLIGVITEN-PV 113
Query: 72 FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGII 131
++IME G+L+SFL+ ++Y SL L + YQ++ + +L S+ +
Sbjct: 114 WIIMELCTLGELRSFLQ---VRKY---------SLDLASLILYAYQLSTALAYLESKRFV 161
Query: 132 HRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVK 191
HRD+AARNVL+ N C K+ DFG +R M S Y + S+G+LPI+WMAPES+ F+
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 220
Query: 192 SDIWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
SD+W FGV +WEI+ G P+ G+ +V+ +
Sbjct: 221 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 252
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 150 bits (378), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 124/212 (58%), Gaps = 20/212 (9%)
Query: 13 MSPERGREGPCI-VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPF 71
MSPE P + VA+KT K + R LQE M+ D HP++V+L+G TE P
Sbjct: 34 MSPE----NPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD-HPHIVKLIGVITEN-PV 87
Query: 72 FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGII 131
++IME G+L+SFL+ ++Y SL L + YQ++ + +L S+ +
Sbjct: 88 WIIMELCTLGELRSFLQ---VRKY---------SLDLASLILYAYQLSTALAYLESKRFV 135
Query: 132 HRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVK 191
HRD+AARNVL+ N C K+ DFG +R M S Y + S+G+LPI+WMAPES+ F+
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 194
Query: 192 SDIWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
SD+W FGV +WEI+ G P+ G+ +V+ +
Sbjct: 195 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 226
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 149 bits (377), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 124/212 (58%), Gaps = 20/212 (9%)
Query: 13 MSPERGREGPCI-VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPF 71
MSPE P + VA+KT K + R LQE M+ D HP++V+L+G TE P
Sbjct: 35 MSPE----NPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD-HPHIVKLIGVITEN-PV 88
Query: 72 FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGII 131
++IME G+L+SFL+ ++Y SL L + YQ++ + +L S+ +
Sbjct: 89 WIIMELCTLGELRSFLQ---VRKY---------SLDLASLILYAYQLSTALAYLESKRFV 136
Query: 132 HRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVK 191
HRD+AARNVL+ N C K+ DFG +R M S Y + S+G+LPI+WMAPES+ F+
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 195
Query: 192 SDIWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
SD+W FGV +WEI+ G P+ G+ +V+ +
Sbjct: 196 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 227
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 149 bits (377), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 124/212 (58%), Gaps = 20/212 (9%)
Query: 13 MSPERGREGPCI-VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPF 71
MSPE P + VA+KT K + R LQE M+ D HP++V+L+G TE P
Sbjct: 37 MSPE----NPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD-HPHIVKLIGVITEN-PV 90
Query: 72 FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGII 131
++IME G+L+SFL+ ++Y SL L + YQ++ + +L S+ +
Sbjct: 91 WIIMELCTLGELRSFLQ---VRKY---------SLDLASLILYAYQLSTALAYLESKRFV 138
Query: 132 HRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVK 191
HRD+AARNVL+ N C K+ DFG +R M S Y + S+G+LPI+WMAPES+ F+
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 197
Query: 192 SDIWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
SD+W FGV +WEI+ G P+ G+ +V+ +
Sbjct: 198 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 229
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 149 bits (377), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 124/212 (58%), Gaps = 20/212 (9%)
Query: 13 MSPERGREGPCI-VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPF 71
MSPE P + VA+KT K + R LQE M+ D HP++V+L+G TE P
Sbjct: 29 MSPE----NPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD-HPHIVKLIGVITEN-PV 82
Query: 72 FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGII 131
++IME G+L+SFL+ ++Y SL L + YQ++ + +L S+ +
Sbjct: 83 WIIMELCTLGELRSFLQ---VRKY---------SLDLASLILYAYQLSTALAYLESKRFV 130
Query: 132 HRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVK 191
HRD+AARNVL+ N C K+ DFG +R M S Y + S+G+LPI+WMAPES+ F+
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 189
Query: 192 SDIWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
SD+W FGV +WEI+ G P+ G+ +V+ +
Sbjct: 190 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 221
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 149 bits (377), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 111/201 (55%), Gaps = 16/201 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KTLK E++R D L E ++M D HPNV+ L G T+ P +I E++ G L
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFD-HPNVIHLEGVVTKSTPVMIITEFMENGSLD 96
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
SFLR + Q T L +A GM++L+ +HR LAARN+L+
Sbjct: 97 SFLRQNDGQ------------FTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNS 144
Query: 145 NHCCKVADFGFAR---DLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
N CKV+DFG +R D + Y G++PIRW APE++ F+ SD+WS+G+++
Sbjct: 145 NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVM 204
Query: 202 WEIVTLGSTPYPGMAAAEVMK 222
WE+++ G PY M +V+
Sbjct: 205 WEVMSYGERPYWDMTNQDVIN 225
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 149 bits (377), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 124/212 (58%), Gaps = 20/212 (9%)
Query: 13 MSPERGREGPCI-VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPF 71
MSPE P + VA+KT K + R LQE M+ D HP++V+L+G TE P
Sbjct: 32 MSPE----NPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD-HPHIVKLIGVITEN-PV 85
Query: 72 FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGII 131
++IME G+L+SFL+ ++Y SL L + YQ++ + +L S+ +
Sbjct: 86 WIIMELCTLGELRSFLQ---VRKY---------SLDLASLILYAYQLSTALAYLESKRFV 133
Query: 132 HRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVK 191
HRD+AARNVL+ N C K+ DFG +R M S Y + S+G+LPI+WMAPES+ F+
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 192
Query: 192 SDIWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
SD+W FGV +WEI+ G P+ G+ +V+ +
Sbjct: 193 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 224
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 114/197 (57%), Gaps = 15/197 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKTLK G L+E +MKTL H +VRL T++EP ++I E++ G L
Sbjct: 39 VAVKTLK--PGTMSVQAFLEEANLMKTLQ-HDKLVRLYAVVTKEEPIYIITEFMAKGSLL 95
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
FL+S + + L F Q+A GM ++ + IHRDL A NVL+ E
Sbjct: 96 DFLKSDEGGK-----------VLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSE 144
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ CK+ADFG AR ++ + Y + + PI+W APE++ F++KS++WSFG+L++EI
Sbjct: 145 SLMCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEI 203
Query: 205 VTLGSTPYPGMAAAEVM 221
VT G PYPG A+VM
Sbjct: 204 VTYGKIPYPGRTNADVM 220
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 124/212 (58%), Gaps = 20/212 (9%)
Query: 13 MSPERGREGPCI-VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPF 71
MSPE P + VA+KT K + R LQE M+ D HP++V+L+G TE P
Sbjct: 32 MSPE----NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD-HPHIVKLIGVITEN-PV 85
Query: 72 FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGII 131
++IME G+L+SFL+ ++Y SL L + YQ++ + +L S+ +
Sbjct: 86 WIIMELCTLGELRSFLQ---VRKY---------SLDLASLILYAYQLSTALAYLESKRFV 133
Query: 132 HRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVK 191
HRD+AARNVL+ N C K+ DFG +R M S Y + S+G+LPI+WMAPES+ F+
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 192
Query: 192 SDIWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
SD+W FGV +WEI+ G P+ G+ +V+ +
Sbjct: 193 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 224
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 117/200 (58%), Gaps = 16/200 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KTLK E++R D L E ++M D HPNVV L G T +P +++E++ G L
Sbjct: 74 VAIKTLKVGYTEKQRRDFLCEASIMGQFD-HPNVVHLEGVVTRGKPVMIVIEFMENGALD 132
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+FLR Q T L +A GM++L+ G +HRDLAARN+L+
Sbjct: 133 AFLRKHDGQ------------FTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNS 180
Query: 145 NHCCKVADFGFARDLMTS--SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
N CKV+DFG +R + +VY + G++P+RW APE++ F+ SD+WS+G+++W
Sbjct: 181 NLVCKVSDFGLSRVIEDDPEAVYT-TTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMW 239
Query: 203 EIVTLGSTPYPGMAAAEVMK 222
E+++ G PY M+ +V+K
Sbjct: 240 EVMSYGERPYWDMSNQDVIK 259
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 119/199 (59%), Gaps = 18/199 (9%)
Query: 26 AVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKL 83
AVK+L E L E +MK HPNV+ LLG C +E P V++ Y+ +G L
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 118
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
++F+R+ ++++ T +DL F QVA+GM++L+S+ +HRDLAARN ++
Sbjct: 119 RNFIRN------------ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 166
Query: 144 ENHCCKVADFGFARDLMTSSV--YERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
E KVADFG ARD+ K+ +LP++WMA ESL F+ KSD+WSFGVL+
Sbjct: 167 EKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 226
Query: 202 WEIVTLGSTPYPGMAAAEV 220
WE++T G+ PYP + ++
Sbjct: 227 WELMTRGAPPYPDVNTFDI 245
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 116/213 (54%), Gaps = 7/213 (3%)
Query: 11 HPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEP 70
H + PE+ + +VAVK LKE A E R D +E ++ L H ++VR G CTE P
Sbjct: 63 HNLLPEQDK---MLVAVKALKE-ASESARQDFQREAELLTMLQ-HQHIVRFFGVCTEGRP 117
Query: 71 FFVIMEYVPYGKLQSFLRSS--RAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 128
++ EY+ +G L FLRS A+ L L + QVA GM +L+
Sbjct: 118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL 177
Query: 129 GIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIF 188
+HRDLA RN L+G+ K+ DFG +RD+ ++ Y LPIRWM PES+ F
Sbjct: 178 HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKF 237
Query: 189 SVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVM 221
+ +SD+WSFGV++WEI T G P+ ++ E +
Sbjct: 238 TTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI 270
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 116/213 (54%), Gaps = 7/213 (3%)
Query: 11 HPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEP 70
H + PE+ + +VAVK LKE A E R D +E ++ L H ++VR G CTE P
Sbjct: 34 HNLLPEQDK---MLVAVKALKE-ASESARQDFQREAELLTMLQ-HQHIVRFFGVCTEGRP 88
Query: 71 FFVIMEYVPYGKLQSFLRSS--RAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 128
++ EY+ +G L FLRS A+ L L + QVA GM +L+
Sbjct: 89 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL 148
Query: 129 GIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIF 188
+HRDLA RN L+G+ K+ DFG +RD+ ++ Y LPIRWM PES+ F
Sbjct: 149 HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKF 208
Query: 189 SVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVM 221
+ +SD+WSFGV++WEI T G P+ ++ E +
Sbjct: 209 TTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI 241
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 116/213 (54%), Gaps = 7/213 (3%)
Query: 11 HPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEP 70
H + PE+ + +VAVK LKE A E R D +E ++ L H ++VR G CTE P
Sbjct: 40 HNLLPEQDK---MLVAVKALKE-ASESARQDFQREAELLTMLQ-HQHIVRFFGVCTEGRP 94
Query: 71 FFVIMEYVPYGKLQSFLRSS--RAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 128
++ EY+ +G L FLRS A+ L L + QVA GM +L+
Sbjct: 95 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL 154
Query: 129 GIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIF 188
+HRDLA RN L+G+ K+ DFG +RD+ ++ Y LPIRWM PES+ F
Sbjct: 155 HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKF 214
Query: 189 SVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVM 221
+ +SD+WSFGV++WEI T G P+ ++ E +
Sbjct: 215 TTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI 247
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 147 bits (372), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 112/199 (56%), Gaps = 14/199 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KTLK E++R+D L E +M H N++RL G ++ +P +I EY+ G L
Sbjct: 76 VAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH-NIIRLEGVISKYKPMMIITEYMENGALD 134
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
FLR K + L +A GM++L++ +HRDLAARN+L+
Sbjct: 135 KFLRE------------KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNS 182
Query: 145 NHCCKVADFGFARDLMTS-SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWE 203
N CKV+DFG +R L S G++PIRW APE++ F+ SD+WSFG+++WE
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWE 242
Query: 204 IVTLGSTPYPGMAAAEVMK 222
++T G PY ++ EVMK
Sbjct: 243 VMTYGERPYWELSNHEVMK 261
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 147 bits (371), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 121/212 (57%), Gaps = 20/212 (9%)
Query: 13 MSPERGREGPCI-VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPF 71
MSPE P + VA+KT K + R LQE M+ D HP++V+L+G TE P
Sbjct: 412 MSPE----NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD-HPHIVKLIGVITEN-PV 465
Query: 72 FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGII 131
++IME G+L+SFL+ + SL L + YQ++ + +L S+ +
Sbjct: 466 WIIMELCTLGELRSFLQVRKF------------SLDLASLILYAYQLSTALAYLESKRFV 513
Query: 132 HRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVK 191
HRD+AARNVL+ C K+ DFG +R M S Y + S+G+LPI+WMAPES+ F+
Sbjct: 514 HRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 572
Query: 192 SDIWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
SD+W FGV +WEI+ G P+ G+ +V+ +
Sbjct: 573 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 604
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 147 bits (371), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 117/208 (56%), Gaps = 17/208 (8%)
Query: 18 GREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEY 77
G++ C VA+KTLK ER+R + L E ++M + HPN++RL G T P ++ E+
Sbjct: 39 GKKESC-VAIKTLKGGYTERQRREFLSEASIMGQFE-HPNIIRLEGVVTNSMPVMILTEF 96
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
+ G L SFLR + Q T L +A GM++L+ +HRDLAA
Sbjct: 97 MENGALDSFLRLNDGQ------------FTVIQLVGMLRGIASGMRYLAEMSYVHRDLAA 144
Query: 138 RNVLIGENHCCKVADFGFARDLMTSS---VYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
RN+L+ N CKV+DFG +R L +S Y G++PIRW APE++ F+ SD
Sbjct: 145 RNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDA 204
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMK 222
WS+G+++WE+++ G PY M+ +V+
Sbjct: 205 WSYGIVMWEVMSFGERPYWDMSNQDVIN 232
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 147 bits (370), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 118/196 (60%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +IM+ +P+G L
Sbjct: 48 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLIMQLMPFGXLL 105
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 106 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 153
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 154 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 213
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 214 MTFGSKPYDGIPASEI 229
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 147 bits (370), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 115/200 (57%), Gaps = 13/200 (6%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
R R +VAVK+ +E + LQE ++K HPN+VRL+G CT+K+P +++ME
Sbjct: 134 RLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIYIVME 192
Query: 77 YVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLA 136
V G +FLR+ A+ L + L A GM++L S+ IHRDLA
Sbjct: 193 LVQGGDFLTFLRTEGAR------------LRVKTLLQMVGDAAAGMEYLESKCCIHRDLA 240
Query: 137 ARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWS 196
ARN L+ E + K++DFG +R+ ++P++W APE+L +S +SD+WS
Sbjct: 241 ARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWS 300
Query: 197 FGVLIWEIVTLGSTPYPGMA 216
FG+L+WE +LG++PYP ++
Sbjct: 301 FGILLWETFSLGASPYPNLS 320
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 147 bits (370), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 115/200 (57%), Gaps = 16/200 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KTLK +++R D L E ++M D HPN++ L G T+ +P +I EY+ G L
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNIIHLEGVVTKCKPVMIITEYMENGSLD 118
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+FLR + + T L + GM++LS +HRDLAARN+L+
Sbjct: 119 AFLRKNDGR------------FTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNS 166
Query: 145 NHCCKVADFGFARDLMTS--SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
N CKV+DFG +R L + Y + G++PIRW APE++ F+ SD+WS+G+++W
Sbjct: 167 NLVCKVSDFGMSRVLEDDPEAAYTTRG-GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMW 225
Query: 203 EIVTLGSTPYPGMAAAEVMK 222
E+++ G PY M+ +V+K
Sbjct: 226 EVMSYGERPYWDMSNQDVIK 245
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 147 bits (370), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 115/200 (57%), Gaps = 16/200 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KTLK +++R D L E ++M D HPN++ L G T+ +P +I EY+ G L
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNIIHLEGVVTKCKPVMIITEYMENGSLD 103
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+FLR + + T L + GM++LS +HRDLAARN+L+
Sbjct: 104 AFLRKNDGR------------FTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNS 151
Query: 145 NHCCKVADFGFARDLMTS--SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
N CKV+DFG +R L + Y + G++PIRW APE++ F+ SD+WS+G+++W
Sbjct: 152 NLVCKVSDFGMSRVLEDDPEAAYTTRG-GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMW 210
Query: 203 EIVTLGSTPYPGMAAAEVMK 222
E+++ G PY M+ +V+K
Sbjct: 211 EVMSYGERPYWDMSNQDVIK 230
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 146 bits (369), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 115/200 (57%), Gaps = 13/200 (6%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
R R +VAVK+ +E + LQE ++K HPN+VRL+G CT+K+P +++ME
Sbjct: 134 RLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIYIVME 192
Query: 77 YVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLA 136
V G +FLR+ A+ L + L A GM++L S+ IHRDLA
Sbjct: 193 LVQGGDFLTFLRTEGAR------------LRVKTLLQMVGDAAAGMEYLESKCCIHRDLA 240
Query: 137 ARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWS 196
ARN L+ E + K++DFG +R+ ++P++W APE+L +S +SD+WS
Sbjct: 241 ARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWS 300
Query: 197 FGVLIWEIVTLGSTPYPGMA 216
FG+L+WE +LG++PYP ++
Sbjct: 301 FGILLWETFSLGASPYPNLS 320
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 146 bits (369), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 115/200 (57%), Gaps = 16/200 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KTLK +++R D L E ++M D HPN++ L G T+ +P +I EY+ G L
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNIIHLEGVVTKCKPVMIITEYMENGSLD 97
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+FLR + + T L + GM++LS +HRDLAARN+L+
Sbjct: 98 AFLRKNDGR------------FTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNS 145
Query: 145 NHCCKVADFGFARDLMTS--SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
N CKV+DFG +R L + Y + G++PIRW APE++ F+ SD+WS+G+++W
Sbjct: 146 NLVCKVSDFGMSRVLEDDPEAAYTTRG-GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMW 204
Query: 203 EIVTLGSTPYPGMAAAEVMK 222
E+++ G PY M+ +V+K
Sbjct: 205 EVMSYGERPYWDMSNQDVIK 224
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 146 bits (369), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 121/212 (57%), Gaps = 20/212 (9%)
Query: 13 MSPERGREGPCI-VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPF 71
MSPE P + VA+KT K + R LQE M+ D HP++V+L+G TE P
Sbjct: 32 MSPE----NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD-HPHIVKLIGVITEN-PV 85
Query: 72 FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGII 131
++IME G+L+SFL+ + SL L + YQ++ + +L S+ +
Sbjct: 86 WIIMELCTLGELRSFLQVRKF------------SLDLASLILYAYQLSTALAYLESKRFV 133
Query: 132 HRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVK 191
HRD+AARNVL+ C K+ DFG +R M S Y + S+G+LPI+WMAPES+ F+
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 192
Query: 192 SDIWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
SD+W FGV +WEI+ G P+ G+ +V+ +
Sbjct: 193 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 224
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 146 bits (369), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 113/198 (57%), Gaps = 16/198 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKT+K + E L E VMKTL H +V+L T KEP ++I E++ G L
Sbjct: 42 VAVKTMKPGSMSVEAF--LAEANVMKTLQ-HDKLVKLHAVVT-KEPIYIITEFMAKGSLL 97
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
FL+S G L L F Q+A GM F+ R IHRDL A N+L+
Sbjct: 98 DFLKSD---------EGSKQPLPK--LIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA 146
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ CK+ADFG AR ++ + Y + + PI+W APE++ F++KSD+WSFG+L+ EI
Sbjct: 147 SLVCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 205
Query: 205 VTLGSTPYPGMAAAEVMK 222
VT G PYPGM+ EV++
Sbjct: 206 VTYGRIPYPGMSNPEVIR 223
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 146 bits (369), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 113/198 (57%), Gaps = 16/198 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKT+K + E L E VMKTL H +V+L T KEP ++I E++ G L
Sbjct: 215 VAVKTMKPGSMSVEAF--LAEANVMKTLQ-HDKLVKLHAVVT-KEPIYIITEFMAKGSLL 270
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
FL+S G L L F Q+A GM F+ R IHRDL A N+L+
Sbjct: 271 DFLKSD---------EGSKQPLPK--LIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA 319
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ CK+ADFG AR ++ + Y + + PI+W APE++ F++KSD+WSFG+L+ EI
Sbjct: 320 SLVCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 378
Query: 205 VTLGSTPYPGMAAAEVMK 222
VT G PYPGM+ EV++
Sbjct: 379 VTYGRIPYPGMSNPEVIR 396
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 146 bits (368), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 121/212 (57%), Gaps = 20/212 (9%)
Query: 13 MSPERGREGPCI-VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPF 71
MSPE P + VA+KT K + R LQE M+ D HP++V+L+G TE P
Sbjct: 32 MSPE----NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD-HPHIVKLIGVITEN-PV 85
Query: 72 FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGII 131
++IME G+L+SFL+ + SL L + YQ++ + +L S+ +
Sbjct: 86 WIIMELCTLGELRSFLQVRKF------------SLDLASLILYAYQLSTALAYLESKRFV 133
Query: 132 HRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVK 191
HRD+AARNVL+ N C K+ DFG +R M S + S+G+LPI+WMAPES+ F+
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTXXKASKGKLPIKWMAPESINFRRFTSA 192
Query: 192 SDIWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
SD+W FGV +WEI+ G P+ G+ +V+ +
Sbjct: 193 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 224
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 118/196 (60%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +IM+ +P+G L
Sbjct: 48 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLIMQLMPFGCLL 105
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 106 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 153
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 154 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 213
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 214 MTFGSKPYDGIPASEI 229
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 118/196 (60%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +IM+ +P+G L
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLIMQLMPFGCLL 107
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 108 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 155
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 156 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 215
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 216 MTFGSKPYDGIPASEI 231
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 145 bits (367), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 118/196 (60%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +IM+ +P+G L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLIMQLMPFGCLL 104
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 105 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 152
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 153 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 213 MTFGSKPYDGIPASEI 228
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 145 bits (367), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 118/196 (60%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +IM+ +P+G L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLIMQLMPFGCLL 106
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 107 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 154
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 155 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 214
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 215 MTFGSKPYDGIPASEI 230
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 145 bits (367), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 118/196 (60%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +IM+ +P+G L
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLIMQLMPFGCLL 111
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 112 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 159
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 160 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 219
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 220 MTFGSKPYDGIPASEI 235
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 145 bits (367), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 118/196 (60%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +IM+ +P+G L
Sbjct: 51 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLIMQLMPFGCLL 108
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 109 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 156
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 157 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 216
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 217 MTFGSKPYDGIPASEI 232
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 118/208 (56%), Gaps = 17/208 (8%)
Query: 18 GREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEY 77
G++ C VA+KTLK ER+R + L E ++M + HPN++RL G T P ++ E+
Sbjct: 41 GKKESC-VAIKTLKGGYTERQRREFLSEASIMGQFE-HPNIIRLEGVVTNSMPVMILTEF 98
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
+ G L SFLR + Q T L +A GM++L+ +HRDLAA
Sbjct: 99 MENGALDSFLRLNDGQ------------FTVIQLVGMLRGIASGMRYLAEMSYVHRDLAA 146
Query: 138 RNVLIGENHCCKVADFGFARDLMTSSVYERKSE---GRLPIRWMAPESLYDNIFSVKSDI 194
RN+L+ N CKV+DFG +R L +S ++ G++PIRW APE++ F+ SD
Sbjct: 147 RNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDA 206
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMK 222
WS+G+++WE+++ G PY M+ +V+
Sbjct: 207 WSYGIVMWEVMSFGERPYWDMSNQDVIN 234
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 145 bits (365), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 112/202 (55%), Gaps = 16/202 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VAVK+LK+ G L E +MK L H +VRL T+ EP ++I EY+
Sbjct: 46 GHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMEN 101
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL++ + LT L Q+A GM F+ R IHRDL A N+
Sbjct: 102 GSLVDFLKTPSGIK-----------LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 150
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ + CK+ADFG AR L+ + Y + + PI+W APE++ F++KSD+WSFG+L
Sbjct: 151 LVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 209
Query: 201 IWEIVTLGSTPYPGMAAAEVMK 222
+ EIVT G PYPGM EV++
Sbjct: 210 LTEIVTHGRIPYPGMTNPEVIQ 231
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 112/202 (55%), Gaps = 16/202 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VAVK+LK+ G L E +MK L H +VRL T+ EP ++I EY+
Sbjct: 31 GHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMEN 86
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL++ + LT L Q+A GM F+ R IHRDL A N+
Sbjct: 87 GSLVDFLKTPSGIK-----------LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 135
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ + CK+ADFG AR L+ + Y + + PI+W APE++ F++KSD+WSFG+L
Sbjct: 136 LVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 194
Query: 201 IWEIVTLGSTPYPGMAAAEVMK 222
+ EIVT G PYPGM EV++
Sbjct: 195 LTEIVTHGRIPYPGMTNPEVIQ 216
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 144 bits (364), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 112/202 (55%), Gaps = 16/202 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VAVK+LK+ G L E +MK L H +VRL T+ EP ++I EY+
Sbjct: 42 GHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMEN 97
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL++ + LT L Q+A GM F+ R IHRDL A N+
Sbjct: 98 GSLVDFLKTPSGIK-----------LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 146
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ + CK+ADFG AR L+ + Y + + PI+W APE++ F++KSD+WSFG+L
Sbjct: 147 LVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 205
Query: 201 IWEIVTLGSTPYPGMAAAEVMK 222
+ EIVT G PYPGM EV++
Sbjct: 206 LTEIVTHGRIPYPGMTNPEVIQ 227
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 144 bits (364), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 117/196 (59%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +I + +P+G L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGXLL 104
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 105 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 152
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 153 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 213 MTFGSKPYDGIPASEI 228
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 144 bits (364), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 112/202 (55%), Gaps = 16/202 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VAVK+LK+ G L E +MK L H +VRL T+ EP ++I EY+
Sbjct: 41 GHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMEN 96
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL++ + LT L Q+A GM F+ R IHRDL A N+
Sbjct: 97 GSLVDFLKTPSGIK-----------LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 145
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ + CK+ADFG AR L+ + Y + + PI+W APE++ F++KSD+WSFG+L
Sbjct: 146 LVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 204
Query: 201 IWEIVTLGSTPYPGMAAAEVMK 222
+ EIVT G PYPGM EV++
Sbjct: 205 LTEIVTHGRIPYPGMTNPEVIQ 226
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 144 bits (364), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 112/202 (55%), Gaps = 16/202 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VAVK+LK+ G L E +MK L H +VRL T+ EP ++I EY+
Sbjct: 36 GHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMEN 91
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL++ + LT L Q+A GM F+ R IHRDL A N+
Sbjct: 92 GSLVDFLKTPSGIK-----------LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 140
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ + CK+ADFG AR L+ + Y + + PI+W APE++ F++KSD+WSFG+L
Sbjct: 141 LVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 201 IWEIVTLGSTPYPGMAAAEVMK 222
+ EIVT G PYPGM EV++
Sbjct: 200 LTEIVTHGRIPYPGMTNPEVIQ 221
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 144 bits (364), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 118/196 (60%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +IM+ +P+G L
Sbjct: 51 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLIMQLMPFGCLL 108
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 109 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 156
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 157 PQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 216
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 217 MTFGSKPYDGIPASEI 232
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 144 bits (363), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 118/196 (60%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +IM+ +P+G L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLIMQLMPFGCLL 106
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 107 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 154
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 155 PQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 214
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 215 MTFGSKPYDGIPASEI 230
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 144 bits (363), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 118/196 (60%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +IM+ +P+G L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLIMQLMPFGCLL 106
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 107 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 154
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 155 PQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 214
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 215 MTFGSKPYDGIPASEI 230
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 143 bits (361), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 117/196 (59%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +I + +P+G L
Sbjct: 53 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLL 110
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 111 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 158
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 159 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 218
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 219 MTFGSKPYDGIPASEI 234
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 143 bits (361), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 117/196 (59%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +I + +P+G L
Sbjct: 72 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLL 129
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 130 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 177
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 178 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 237
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 238 MTFGSKPYDGIPASEI 253
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 117/196 (59%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +I + +P+G L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLL 104
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 105 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 152
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 153 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 213 MTFGSKPYDGIPASEI 228
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 117/203 (57%), Gaps = 15/203 (7%)
Query: 25 VAVKTLKENA-GERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKE-----PF-FVIMEY 77
VAVK LK + + + L+E MK D HP+V +L+G P VI+ +
Sbjct: 54 VAVKMLKADIIASSDIEEFLREAACMKEFD-HPHVAKLVGVSLRSRAKGRLPIPMVILPF 112
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
+ +G L +FL +SR N L + L F +A GM++LSSR IHRDLAA
Sbjct: 113 MKHGDLHAFLLASRIGENPFN-------LPLQTLVRFMVDIACGMEYLSSRNFIHRDLAA 165
Query: 138 RNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSF 197
RN ++ E+ VADFG +R + + Y + +LP++W+A ESL DN+++V SD+W+F
Sbjct: 166 RNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAF 225
Query: 198 GVLIWEIVTLGSTPYPGMAAAEV 220
GV +WEI+T G TPY G+ AE+
Sbjct: 226 GVTMWEIMTRGQTPYAGIENAEI 248
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 117/196 (59%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +I + +P+G L
Sbjct: 57 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLL 114
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 115 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 162
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 163 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 222
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 223 MTFGSKPYDGIPASEI 238
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 117/196 (59%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +I + +P+G L
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLL 111
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 112 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 159
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 160 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 219
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 220 MTFGSKPYDGIPASEI 235
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 117/196 (59%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +I + +P+G L
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLL 107
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 108 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 155
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 156 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 215
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 216 MTFGSKPYDGIPASEI 231
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 117/196 (59%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +I + +P+G L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLL 104
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 105 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 152
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 153 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 213 MTFGSKPYDGIPASEI 228
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 117/196 (59%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +I + +P+G L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLL 104
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 105 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 152
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 153 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 213 MTFGSKPYDGIPASEI 228
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 117/196 (59%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +I + +P+G L
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLL 107
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 108 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 155
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 156 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 215
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 216 MTFGSKPYDGIPASEI 231
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 117/196 (59%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +I + +P+G L
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLL 107
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 108 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 155
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 156 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 215
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 216 MTFGSKPYDGIPASEI 231
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 117/196 (59%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +I + +P+G L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLL 106
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 107 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 154
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 155 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 214
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 215 MTFGSKPYDGIPASEI 230
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 143 bits (360), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 117/196 (59%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +I + +P+G L
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLL 111
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 112 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 159
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 160 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 219
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 220 MTFGSKPYDGIPASEI 235
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 143 bits (360), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 117/196 (59%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +I + +P+G L
Sbjct: 41 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLL 98
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 99 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 146
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 147 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 206
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 207 MTFGSKPYDGIPASEI 222
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 143 bits (360), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 112/203 (55%), Gaps = 16/203 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VAVK+LK+ G L E +MK L H +VRL T+ EP ++I EY+
Sbjct: 32 GHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMEN 87
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL++ + LT L Q+A GM F+ R IHR+L A N+
Sbjct: 88 GSLVDFLKTPSGIK-----------LTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANI 136
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ + CK+ADFG AR L+ + Y + + PI+W APE++ F++KSD+WSFG+L
Sbjct: 137 LVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 195
Query: 201 IWEIVTLGSTPYPGMAAAEVMKK 223
+ EIVT G PYPGM EV++
Sbjct: 196 LTEIVTHGRIPYPGMTNPEVIQN 218
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 114/196 (58%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L E G + ++ + E +M ++D HP++VRLLG C ++ + +P+G L
Sbjct: 70 VAIKILNETTGPKANVEFMDEALIMASMD-HPHLVRLLGVCLSPT-IQLVTQLMPHGCLL 127
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++ H +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 128 EYV------------HEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKS 175
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG AR L G++PI+WMA E ++ F+ +SD+WS+GV IWE+
Sbjct: 176 PNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWEL 235
Query: 205 VTLGSTPYPGMAAAEV 220
+T G PY G+ E+
Sbjct: 236 MTFGGKPYDGIPTREI 251
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 114/196 (58%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L E G + ++ + E +M ++D HP++VRLLG C ++ + +P+G L
Sbjct: 47 VAIKILNETTGPKANVEFMDEALIMASMD-HPHLVRLLGVCLSPT-IQLVTQLMPHGCLL 104
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++ H +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 105 EYV------------HEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKS 152
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG AR L G++PI+WMA E ++ F+ +SD+WS+GV IWE+
Sbjct: 153 PNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWEL 212
Query: 205 VTLGSTPYPGMAAAEV 220
+T G PY G+ E+
Sbjct: 213 MTFGGKPYDGIPTREI 228
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 110/198 (55%), Gaps = 16/198 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KT++E A E D ++E VM L HP +V+L G C E+ P ++ E++ +G L
Sbjct: 34 VAIKTIREGAMSEE--DFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLS 90
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR+ R + L C V GM +L +IHRDLAARN L+GE
Sbjct: 91 DYLRTQRGL------------FAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGE 138
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
N KV+DFG R ++ Y + + P++W +PE + +S KSD+WSFGVL+WE+
Sbjct: 139 NQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 197
Query: 205 VTLGSTPYPGMAAAEVMK 222
+ G PY + +EV++
Sbjct: 198 FSEGKIPYENRSNSEVVE 215
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 116/196 (59%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +I + +P+G L
Sbjct: 44 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLL 101
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A GM +L R ++HRDLAARNVL+
Sbjct: 102 DYVREHK------------DNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKT 149
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 150 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 209
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 210 MTFGSKPYDGIPASEI 225
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 110/204 (53%), Gaps = 16/204 (7%)
Query: 20 EGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVP 79
+G VAVK +KE G + QE M L HP +V+ G C+++ P +++ EY+
Sbjct: 30 KGQYDVAVKMIKE--GSMSEDEFFQEAQTMMKLS-HPKLVKFYGVCSKEYPIYIVTEYIS 86
Query: 80 YGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARN 139
G L ++LRS HGK L L CY V GM FL S IHRDLAARN
Sbjct: 87 NGCLLNYLRS----------HGKG--LEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARN 134
Query: 140 VLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGV 199
L+ + C KV+DFG R ++ Y + P++W APE + +S KSD+W+FG+
Sbjct: 135 CLVDRDLCVKVSDFGMTRYVLDDQ-YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGI 193
Query: 200 LIWEIVTLGSTPYPGMAAAEVMKK 223
L+WE+ +LG PY +EV+ K
Sbjct: 194 LMWEVFSLGKMPYDLYTNSEVVLK 217
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 117/196 (59%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +I + +P+G L
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLL 111
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 112 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 159
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 160 PQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 219
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 220 MTFGSKPYDGIPASEI 235
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 117/196 (59%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +I + +P+G L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLL 106
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 107 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 154
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 155 PQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 214
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 215 MTFGSKPYDGIPASEI 230
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 117/196 (59%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+E + ++L E VM ++D +P+V RLLG C +I + +P+G L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLL 104
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 105 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 152
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 153 PQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 213 MTFGSKPYDGIPASEI 228
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 111/202 (54%), Gaps = 16/202 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VAVK+LK+ G L E +MK L H +VRL T+ EP ++I EY+
Sbjct: 44 GHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMEN 99
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL++ + LT L Q+A GM F+ R IHRDL A N+
Sbjct: 100 GSLVDFLKTPSGIK-----------LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 148
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ + CK+ADFG AR L+ + + + PI+W APE++ F++KSD+WSFG+L
Sbjct: 149 LVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 207
Query: 201 IWEIVTLGSTPYPGMAAAEVMK 222
+ EIVT G PYPGM EV++
Sbjct: 208 LTEIVTHGRIPYPGMTNPEVIQ 229
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 111/202 (54%), Gaps = 16/202 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VAVK+LK+ G L E +MK L H +VRL T+ EP ++I EY+
Sbjct: 42 GHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMEN 97
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL++ + LT L Q+A GM F+ R IHRDL A N+
Sbjct: 98 GSLVDFLKTPSGIK-----------LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 146
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ + CK+ADFG AR L+ + + + PI+W APE++ F++KSD+WSFG+L
Sbjct: 147 LVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 205
Query: 201 IWEIVTLGSTPYPGMAAAEVMK 222
+ EIVT G PYPGM EV++
Sbjct: 206 LTEIVTHGRIPYPGMTNPEVIQ 227
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 111/202 (54%), Gaps = 16/202 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VAVK+LK+ G L E +MK L H +VRL T+ EP ++I EY+
Sbjct: 36 GHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMEN 91
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL++ + LT L Q+A GM F+ R IHRDL A N+
Sbjct: 92 GSLVDFLKTPSGIK-----------LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 140
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ + CK+ADFG AR L+ + + + PI+W APE++ F++KSD+WSFG+L
Sbjct: 141 LVSDTLSCKIADFGLAR-LIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 201 IWEIVTLGSTPYPGMAAAEVMK 222
+ EIVT G PYPGM EV++
Sbjct: 200 LTEIVTHGRIPYPGMTNPEVIQ 221
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 111/202 (54%), Gaps = 16/202 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VAVK+LK+ G L E +MK L H +VRL T+ EP ++I EY+
Sbjct: 45 GHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMEN 100
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL++ + LT L Q+A GM F+ R IHRDL A N+
Sbjct: 101 GSLVDFLKTPSGIK-----------LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 149
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ + CK+ADFG AR L+ + + + PI+W APE++ F++KSD+WSFG+L
Sbjct: 150 LVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 208
Query: 201 IWEIVTLGSTPYPGMAAAEVMK 222
+ EIVT G PYPGM EV++
Sbjct: 209 LTEIVTHGRIPYPGMTNPEVIQ 230
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 111/202 (54%), Gaps = 16/202 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VAVK+LK+ G L E +MK L H +VRL T+ EP ++I EY+
Sbjct: 36 GHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMEN 91
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL++ + LT L Q+A GM F+ R IHRDL A N+
Sbjct: 92 GSLVDFLKTPSGIK-----------LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 140
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ + CK+ADFG AR L+ + + + PI+W APE++ F++KSD+WSFG+L
Sbjct: 141 LVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 201 IWEIVTLGSTPYPGMAAAEVMK 222
+ EIVT G PYPGM EV++
Sbjct: 200 LTEIVTHGRIPYPGMTNPEVIQ 221
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 110/198 (55%), Gaps = 16/198 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KT++E A E D ++E VM L HP +V+L G C E+ P ++ E++ +G L
Sbjct: 32 VAIKTIREGAMSEE--DFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLS 88
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR+ R + L C V GM +L +IHRDLAARN L+GE
Sbjct: 89 DYLRTQRGL------------FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE 136
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
N KV+DFG R ++ Y + + P++W +PE + +S KSD+WSFGVL+WE+
Sbjct: 137 NQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 195
Query: 205 VTLGSTPYPGMAAAEVMK 222
+ G PY + +EV++
Sbjct: 196 FSEGKIPYENRSNSEVVE 213
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 111/202 (54%), Gaps = 16/202 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VAVK+LK+ G L E +MK L H +VRL T+ EP ++I EY+
Sbjct: 37 GHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMEN 92
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL++ + LT L Q+A GM F+ R IHRDL A N+
Sbjct: 93 GSLVDFLKTPSGIK-----------LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 141
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ + CK+ADFG AR L+ + + + PI+W APE++ F++KSD+WSFG+L
Sbjct: 142 LVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 200
Query: 201 IWEIVTLGSTPYPGMAAAEVMK 222
+ EIVT G PYPGM EV++
Sbjct: 201 LTEIVTHGRIPYPGMTNPEVIQ 222
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 111/202 (54%), Gaps = 16/202 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VAVK+LK+ G L E +MK L H +VRL T+ EP ++I EY+
Sbjct: 38 GHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMEN 93
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL++ + LT L Q+A GM F+ R IHRDL A N+
Sbjct: 94 GSLVDFLKTPSGIK-----------LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 142
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ + CK+ADFG AR L+ + + + PI+W APE++ F++KSD+WSFG+L
Sbjct: 143 LVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 201
Query: 201 IWEIVTLGSTPYPGMAAAEVMK 222
+ EIVT G PYPGM EV++
Sbjct: 202 LTEIVTHGRIPYPGMTNPEVIQ 223
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 111/202 (54%), Gaps = 16/202 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VAVK+LK+ G L E +MK L H +VRL T+ EP ++I EY+
Sbjct: 36 GHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMEN 91
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL++ + LT L Q+A GM F+ R IHRDL A N+
Sbjct: 92 GSLVDFLKTPSGIK-----------LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 140
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ + CK+ADFG AR L+ + + + PI+W APE++ F++KSD+WSFG+L
Sbjct: 141 LVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 201 IWEIVTLGSTPYPGMAAAEVMK 222
+ EIVT G PYPGM EV++
Sbjct: 200 LTEIVTHGRIPYPGMTNPEVIQ 221
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 110/198 (55%), Gaps = 16/198 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KT++E A E D ++E VM L HP +V+L G C E+ P ++ E++ +G L
Sbjct: 34 VAIKTIREGAMSEE--DFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLS 90
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR+ R + L C V GM +L +IHRDLAARN L+GE
Sbjct: 91 DYLRTQRGL------------FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE 138
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
N KV+DFG R ++ Y + + P++W +PE + +S KSD+WSFGVL+WE+
Sbjct: 139 NQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 197
Query: 205 VTLGSTPYPGMAAAEVMK 222
+ G PY + +EV++
Sbjct: 198 FSEGKIPYENRSNSEVVE 215
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 121/224 (54%), Gaps = 5/224 (2%)
Query: 2 DCFSVEVRKHPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL 61
D F + H P G + VA+KTLK+ A R + E + L HPNVV L
Sbjct: 37 DRFGKVYKGHLFGPAPGEQTQA-VAIKTLKDKAEGPLREEFRHEAMLRARLQ-HPNVVCL 94
Query: 62 LGCCTEKEPFFVIMEYVPYGKLQSFL--RSSRAQ-RYYNNMHGKSNSLTSRDLTSFCYQV 118
LG T+ +P +I Y +G L FL RS + ++ ++L D Q+
Sbjct: 95 LGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQI 154
Query: 119 ARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWM 178
A GM++LSS ++H+DLA RNVL+ + K++D G R++ + Y+ LPIRWM
Sbjct: 155 AAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWM 214
Query: 179 APESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMK 222
APE++ FS+ SDIWS+GV++WE+ + G PY G + +V++
Sbjct: 215 APEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE 258
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 121/224 (54%), Gaps = 5/224 (2%)
Query: 2 DCFSVEVRKHPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL 61
D F + H P G + VA+KTLK+ A R + E + L HPNVV L
Sbjct: 20 DRFGKVYKGHLFGPAPGEQTQA-VAIKTLKDKAEGPLREEFRHEAMLRARLQ-HPNVVCL 77
Query: 62 LGCCTEKEPFFVIMEYVPYGKLQSFL--RSSRAQ-RYYNNMHGKSNSLTSRDLTSFCYQV 118
LG T+ +P +I Y +G L FL RS + ++ ++L D Q+
Sbjct: 78 LGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQI 137
Query: 119 ARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWM 178
A GM++LSS ++H+DLA RNVL+ + K++D G R++ + Y+ LPIRWM
Sbjct: 138 AAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWM 197
Query: 179 APESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMK 222
APE++ FS+ SDIWS+GV++WE+ + G PY G + +V++
Sbjct: 198 APEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE 241
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 141 bits (355), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 110/198 (55%), Gaps = 16/198 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KT++E A E D ++E VM L HP +V+L G C E+ P ++ E++ +G L
Sbjct: 37 VAIKTIREGAMSEE--DFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR+ R + L C V GM +L +IHRDLAARN L+GE
Sbjct: 94 DYLRTQRGL------------FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE 141
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
N KV+DFG R ++ Y + + P++W +PE + +S KSD+WSFGVL+WE+
Sbjct: 142 NQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 200
Query: 205 VTLGSTPYPGMAAAEVMK 222
+ G PY + +EV++
Sbjct: 201 FSEGKIPYENRSNSEVVE 218
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 141 bits (355), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 116/196 (59%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+ L+E + ++L E VM ++D +P+V RLLG C +I + +P+G L
Sbjct: 81 VAIMELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLL 138
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++R + +++ S+ L ++C Q+A+GM +L R ++HRDLAARNVL+
Sbjct: 139 DYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 186
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A+ L G++PI+WMA ES+ I++ +SD+WS+GV +WE+
Sbjct: 187 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 246
Query: 205 VTLGSTPYPGMAAAEV 220
+T GS PY G+ A+E+
Sbjct: 247 MTFGSKPYDGIPASEI 262
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 140 bits (354), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 110/203 (54%), Gaps = 16/203 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+KTLK E LQE VMK L H +V+L +E EP +++ EY+
Sbjct: 41 GTTRVAIKTLKPGTMSPEAF--LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSK 96
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL+ + L L Q+A GM ++ +HRDLAA N+
Sbjct: 97 GSLLDFLKGEMGK-----------YLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANI 145
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+GEN CKVADFG AR L+ + Y + + PI+W APE+ F++KSD+WSFG+L
Sbjct: 146 LVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 204
Query: 201 IWEIVTLGSTPYPGMAAAEVMKK 223
+ E+ T G PYPGM EV+ +
Sbjct: 205 LTELTTKGRVPYPGMVNREVLDQ 227
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 140 bits (354), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 110/198 (55%), Gaps = 16/198 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KT++E A E D ++E VM L HP +V+L G C E+ P ++ E++ +G L
Sbjct: 35 VAIKTIREGAMSEE--DFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR+ R + L C V GM +L +IHRDLAARN L+GE
Sbjct: 92 DYLRTQRGL------------FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE 139
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
N KV+DFG R ++ Y + + P++W +PE + +S KSD+WSFGVL+WE+
Sbjct: 140 NQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 198
Query: 205 VTLGSTPYPGMAAAEVMK 222
+ G PY + +EV++
Sbjct: 199 FSEGKIPYENRSNSEVVE 216
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 140 bits (352), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 109/198 (55%), Gaps = 16/198 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+KT+KE G D ++E VM L HP +V+L G C E+ P ++ E++ +G L
Sbjct: 54 VAIKTIKE--GSMSEDDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLS 110
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+LR+ R + L C V GM +L +IHRDLAARN L+GE
Sbjct: 111 DYLRTQRGL------------FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE 158
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
N KV+DFG R ++ Y + + P++W +PE + +S KSD+WSFGVL+WE+
Sbjct: 159 NQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 217
Query: 205 VTLGSTPYPGMAAAEVMK 222
+ G PY + +EV++
Sbjct: 218 FSEGKIPYENRSNSEVVE 235
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 140 bits (352), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 112/196 (57%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K L+EN + ++L E VM + P V RLLG C ++ + +PYG L
Sbjct: 49 VAIKVLRENTSPKANKEILDEAYVMAGVG-SPYVSRLLGICLTST-VQLVTQLMPYGCLL 106
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+R +R + L S+DL ++C Q+A+GM +L ++HRDLAARNVL+
Sbjct: 107 DHVRENRGR------------LGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKS 154
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG AR L G++PI+WMA ES+ F+ +SD+WS+GV +WE+
Sbjct: 155 PNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWEL 214
Query: 205 VTLGSTPYPGMAAAEV 220
+T G+ PY G+ A E+
Sbjct: 215 MTFGAKPYDGIPAREI 230
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 140 bits (352), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 108/198 (54%), Gaps = 26/198 (13%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKT+K + E L E VMKTL H +V+L T KEP ++I E++ G L
Sbjct: 209 VAVKTMKPGSMSVEAF--LAEANVMKTLQ-HDKLVKLHAVVT-KEPIYIITEFMAKGSLL 264
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
FL+S G L L F Q+A GM F+ R IHRDL A N+L+
Sbjct: 265 DFLKSD---------EGSKQPLPK--LIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA 313
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ CK+ADFG AR + PI+W APE++ F++KSD+WSFG+L+ EI
Sbjct: 314 SLVCKIADFGLAR-----------VGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 362
Query: 205 VTLGSTPYPGMAAAEVMK 222
VT G PYPGM+ EV++
Sbjct: 363 VTYGRIPYPGMSNPEVIR 380
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 110/203 (54%), Gaps = 16/203 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+KTLK E LQE VMK L H +V+L +E EP +++MEY+
Sbjct: 41 GTTRVAIKTLKPGTMSPEAF--LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVMEYMSK 96
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL+ + L L Q+A GM ++ +HRDL A N+
Sbjct: 97 GCLLDFLKGEMGK-----------YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 145
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+GEN CKVADFG AR L+ + Y + + PI+W APE+ F++KSD+WSFG+L
Sbjct: 146 LVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 204
Query: 201 IWEIVTLGSTPYPGMAAAEVMKK 223
+ E+ T G PYPGM EV+ +
Sbjct: 205 LTELTTKGRVPYPGMVNREVLDQ 227
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 109/203 (53%), Gaps = 16/203 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+KTLK E LQE VMK L H +V+L +E EP +++ EY+
Sbjct: 290 GTTRVAIKTLKPGTMSPEAF--LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSK 345
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL+ + L L Q+A GM ++ +HRDL A N+
Sbjct: 346 GSLLDFLKGETGKY-----------LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 394
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+GEN CKVADFG AR L+ + Y + + PI+W APE+ F++KSD+WSFG+L
Sbjct: 395 LVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 453
Query: 201 IWEIVTLGSTPYPGMAAAEVMKK 223
+ E+ T G PYPGM EV+ +
Sbjct: 454 LTELTTKGRVPYPGMVNREVLDQ 476
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 109/203 (53%), Gaps = 16/203 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+KTLK E LQE VMK L H +V+L +E EP +++ EY+
Sbjct: 207 GTTRVAIKTLKPGTMSPEAF--LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSK 262
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL+ + L L Q+A GM ++ +HRDL A N+
Sbjct: 263 GSLLDFLKGETGK-----------YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 311
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+GEN CKVADFG AR L+ + Y + + PI+W APE+ F++KSD+WSFG+L
Sbjct: 312 LVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 370
Query: 201 IWEIVTLGSTPYPGMAAAEVMKK 223
+ E+ T G PYPGM EV+ +
Sbjct: 371 LTELTTKGRVPYPGMVNREVLDQ 393
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 110/203 (54%), Gaps = 16/203 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+KTLK E LQE VMK L H +V+L +E EP ++++EY+
Sbjct: 41 GTTRVAIKTLKPGTMSPEAF--LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVIEYMSK 96
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL+ + L L Q+A GM ++ +HRDL A N+
Sbjct: 97 GSLLDFLKGEMGK-----------YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 145
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+GEN CKVADFG AR L+ + Y + + PI+W APE+ F++KSD+WSFG+L
Sbjct: 146 LVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 204
Query: 201 IWEIVTLGSTPYPGMAAAEVMKK 223
+ E+ T G PYPGM EV+ +
Sbjct: 205 LTELTTKGRVPYPGMVNREVLDQ 227
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 109/203 (53%), Gaps = 16/203 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+KTLK E LQE VMK L H +V+L +E EP +++ EY+
Sbjct: 207 GTTRVAIKTLKPGTMSPEAF--LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSK 262
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL+ + L L Q+A GM ++ +HRDL A N+
Sbjct: 263 GSLLDFLKGETGK-----------YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 311
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+GEN CKVADFG AR L+ + Y + + PI+W APE+ F++KSD+WSFG+L
Sbjct: 312 LVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 370
Query: 201 IWEIVTLGSTPYPGMAAAEVMKK 223
+ E+ T G PYPGM EV+ +
Sbjct: 371 LTELTTKGRVPYPGMVNREVLDQ 393
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 114/190 (60%), Gaps = 16/190 (8%)
Query: 26 AVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPF-FVIMEYVPYGKLQ 84
A+K+L ++ L+E +M+ L+ HPNV+ L+G E V++ Y+ +G L
Sbjct: 53 AIKSLSRITEMQQVEAFLREGLLMRGLN-HPNVLALIGIMLPPEGLPHVLLPYMCHGDLL 111
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
F+RS + + T +DL SF QVARGM++L+ + +HRDLAARN ++ E
Sbjct: 112 QFIRSPQ------------RNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDE 159
Query: 145 NHCCKVADFGFARDLMTSSVY--ERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
+ KVADFG ARD++ Y ++ RLP++W A ESL F+ KSD+WSFGVL+W
Sbjct: 160 SFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLW 219
Query: 203 EIVTLGSTPY 212
E++T G+ PY
Sbjct: 220 ELLTRGAPPY 229
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 114/213 (53%), Gaps = 8/213 (3%)
Query: 13 MSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFF 72
+SP + + +VAVK LK+ R D +E ++ L H ++V+ G C + +P
Sbjct: 39 LSPTKDK---MLVAVKALKDPT-LAARKDFQREAELLTNLQ-HEHIVKFYGVCGDGDPLI 93
Query: 73 VIMEYVPYGKLQSFLRSSRAQRYY---NNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRG 129
++ EY+ +G L FLR+ L + Q+A GM +L+S+
Sbjct: 94 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH 153
Query: 130 IIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFS 189
+HRDLA RN L+G N K+ DFG +RD+ ++ Y LPIRWM PES+ F+
Sbjct: 154 FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFT 213
Query: 190 VKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMK 222
+SD+WSFGV++WEI T G P+ ++ EV++
Sbjct: 214 TESDVWSFGVILWEIFTYGKQPWFQLSNTEVIE 246
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 109/203 (53%), Gaps = 16/203 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+KTLK E LQE VMK L H +V+L +E EP +++ EY+
Sbjct: 207 GTTRVAIKTLKPGTMSPEAF--LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVGEYMSK 262
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL+ + L L Q+A GM ++ +HRDL A N+
Sbjct: 263 GSLLDFLKGETGK-----------YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 311
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+GEN CKVADFG AR L+ + Y + + PI+W APE+ F++KSD+WSFG+L
Sbjct: 312 LVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 370
Query: 201 IWEIVTLGSTPYPGMAAAEVMKK 223
+ E+ T G PYPGM EV+ +
Sbjct: 371 LTELTTKGRVPYPGMVNREVLDQ 393
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 109/203 (53%), Gaps = 16/203 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+KTLK E LQE VMK L H +V+L +E EP +++ EY+
Sbjct: 41 GTTRVAIKTLKPGTMSPEAF--LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSK 96
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL+ + L L Q+A GM ++ +HRDL A N+
Sbjct: 97 GSLLDFLKGEMGK-----------YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 145
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+GEN CKVADFG AR L+ + Y + + PI+W APE+ F++KSD+WSFG+L
Sbjct: 146 LVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 204
Query: 201 IWEIVTLGSTPYPGMAAAEVMKK 223
+ E+ T G PYPGM EV+ +
Sbjct: 205 LTELTTKGRVPYPGMVNREVLDQ 227
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 109/203 (53%), Gaps = 16/203 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+KTLK E LQE VMK L H +V+L +E EP +++ EY+
Sbjct: 34 GTTRVAIKTLKPGTMSPEAF--LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSK 89
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL+ + L L Q+A GM ++ +HRDL A N+
Sbjct: 90 GSLLDFLKGETGK-----------YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 138
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+GEN CKVADFG AR L+ + Y + + PI+W APE+ F++KSD+WSFG+L
Sbjct: 139 LVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 197
Query: 201 IWEIVTLGSTPYPGMAAAEVMKK 223
+ E+ T G PYPGM EV+ +
Sbjct: 198 LTELTTKGRVPYPGMVNREVLDQ 220
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 109/203 (53%), Gaps = 16/203 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+KTLK E LQE VMK L H +V+L +E EP +++ EY+
Sbjct: 32 GTTRVAIKTLKPGTMSPEAF--LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSK 87
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL+ + L L Q+A GM ++ +HRDL A N+
Sbjct: 88 GSLLDFLKGEMGK-----------YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 136
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+GEN CKVADFG AR L+ + Y + + PI+W APE+ F++KSD+WSFG+L
Sbjct: 137 LVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 195
Query: 201 IWEIVTLGSTPYPGMAAAEVMKK 223
+ E+ T G PYPGM EV+ +
Sbjct: 196 LTELTTKGRVPYPGMVNREVLDQ 218
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 109/203 (53%), Gaps = 16/203 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+KTLK E LQE VMK L H +V+L +E EP +++ EY+
Sbjct: 30 GTTRVAIKTLKPGTMSPEAF--LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSK 85
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL+ + L L Q+A GM ++ +HRDL A N+
Sbjct: 86 GSLLDFLKGEMGK-----------YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 134
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+GEN CKVADFG AR L+ + Y + + PI+W APE+ F++KSD+WSFG+L
Sbjct: 135 LVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 193
Query: 201 IWEIVTLGSTPYPGMAAAEVMKK 223
+ E+ T G PYPGM EV+ +
Sbjct: 194 LTELTTKGRVPYPGMVNREVLDQ 216
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 138 bits (347), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 114/206 (55%), Gaps = 15/206 (7%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
R R+ VA+K LK+ + + ++++E +M LD +P +VRL+G C + E ++ME
Sbjct: 32 RMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD-NPYIVRLIGVC-QAEALMLVME 89
Query: 77 YVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLA 136
G L FL GK + ++ +QV+ GM++L + +HRDLA
Sbjct: 90 MAGGGPLHKFLV------------GKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLA 137
Query: 137 ARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
ARNVL+ H K++DFG ++ L S Y +S G+ P++W APE + FS +SD+W
Sbjct: 138 ARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVW 197
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
S+GV +WE ++ G PY M EVM
Sbjct: 198 SYGVTMWEALSYGQKPYKKMKGPEVM 223
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 138 bits (347), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 109/203 (53%), Gaps = 16/203 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+KTLK E LQE VMK L H +V+L +E EP +++ EY+
Sbjct: 38 GTTRVAIKTLKPGTMSPEAF--LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMNK 93
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL+ + L L Q+A GM ++ +HRDL A N+
Sbjct: 94 GSLLDFLKGETGK-----------YLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANI 142
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+GEN CKVADFG AR L+ + Y + + PI+W APE+ F++KSD+WSFG+L
Sbjct: 143 LVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 201
Query: 201 IWEIVTLGSTPYPGMAAAEVMKK 223
+ E+ T G PYPGM EV+ +
Sbjct: 202 LTELTTKGRVPYPGMVNREVLDQ 224
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 137 bits (346), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 109/203 (53%), Gaps = 16/203 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+KTLK E LQE VMK + H +V+L +E EP +++ EY+
Sbjct: 41 GTTRVAIKTLKPGTMSPEAF--LQEAQVMKKIR-HEKLVQLYAVVSE-EPIYIVTEYMSK 96
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL+ + L L Q+A GM ++ +HRDL A N+
Sbjct: 97 GSLLDFLKGEMGK-----------YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 145
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+GEN CKVADFG AR L+ + Y + + PI+W APE+ F++KSD+WSFG+L
Sbjct: 146 LVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 204
Query: 201 IWEIVTLGSTPYPGMAAAEVMKK 223
+ E+ T G PYPGM EV+ +
Sbjct: 205 LTELTTKGRVPYPGMVNREVLDQ 227
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 137 bits (346), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 109/203 (53%), Gaps = 16/203 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+KTLK E LQE VMK L H +V+L +E EP +++ EY+
Sbjct: 41 GTTRVAIKTLKPGTMSPEAF--LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVCEYMSK 96
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL+ + L L Q+A GM ++ +HRDL A N+
Sbjct: 97 GSLLDFLKGEMGK-----------YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 145
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+GEN CKVADFG AR L+ + Y + + PI+W APE+ F++KSD+WSFG+L
Sbjct: 146 LVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 204
Query: 201 IWEIVTLGSTPYPGMAAAEVMKK 223
+ E+ T G PYPGM EV+ +
Sbjct: 205 LTELTTKGRVPYPGMVNREVLDQ 227
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 137 bits (346), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 106/181 (58%), Gaps = 16/181 (8%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
+LL E VM+ LD +P +VR++G C E E + ++ME G L +L+ +R
Sbjct: 58 ELLAEANVMQQLD-NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR--------- 106
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ +++ +QV+ GM++L +HRDLAARNVL+ H K++DFG ++ L
Sbjct: 107 ----HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 162
Query: 161 TS-SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAE 219
+ Y+ ++ G+ P++W APE + FS KSD+WSFGVL+WE + G PY GM +E
Sbjct: 163 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
Query: 220 V 220
V
Sbjct: 223 V 223
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 137 bits (346), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 106/181 (58%), Gaps = 16/181 (8%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
+LL E VM+ LD +P +VR++G C E E + ++ME G L +L+ +R
Sbjct: 58 ELLAEANVMQQLD-NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR--------- 106
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ +++ +QV+ GM++L +HRDLAARNVL+ H K++DFG ++ L
Sbjct: 107 ----HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 162
Query: 161 TS-SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAE 219
+ Y+ ++ G+ P++W APE + FS KSD+WSFGVL+WE + G PY GM +E
Sbjct: 163 ADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
Query: 220 V 220
V
Sbjct: 223 V 223
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 137 bits (346), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 106/181 (58%), Gaps = 16/181 (8%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
+LL E VM+ LD +P +VR++G C E E + ++ME G L +L+ +R
Sbjct: 52 ELLAEANVMQQLD-NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR--------- 100
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ +++ +QV+ GM++L +HRDLAARNVL+ H K++DFG ++ L
Sbjct: 101 ----HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 156
Query: 161 TS-SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAE 219
+ Y+ ++ G+ P++W APE + FS KSD+WSFGVL+WE + G PY GM +E
Sbjct: 157 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 216
Query: 220 V 220
V
Sbjct: 217 V 217
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 137 bits (346), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 106/181 (58%), Gaps = 16/181 (8%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
+LL E VM+ LD +P +VR++G C E E + ++ME G L +L+ +R
Sbjct: 54 ELLAEANVMQQLD-NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR--------- 102
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ +++ +QV+ GM++L +HRDLAARNVL+ H K++DFG ++ L
Sbjct: 103 ----HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 158
Query: 161 TS-SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAE 219
+ Y+ ++ G+ P++W APE + FS KSD+WSFGVL+WE + G PY GM +E
Sbjct: 159 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 218
Query: 220 V 220
V
Sbjct: 219 V 219
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 137 bits (346), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 108/203 (53%), Gaps = 16/203 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+KTLK G LQE VMK L H +V+L +E EP +++ EY+
Sbjct: 208 GTTRVAIKTLK--PGNMSPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSK 263
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL+ + L L Q+A GM ++ +HRDL A N+
Sbjct: 264 GSLLDFLKGEMGK-----------YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 312
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+GEN CKVADFG R L+ + Y + + PI+W APE+ F++KSD+WSFG+L
Sbjct: 313 LVGENLVCKVADFGLGR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 371
Query: 201 IWEIVTLGSTPYPGMAAAEVMKK 223
+ E+ T G PYPGM EV+ +
Sbjct: 372 LTELTTKGRVPYPGMVNREVLDQ 394
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 137 bits (346), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 106/181 (58%), Gaps = 16/181 (8%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
+LL E VM+ LD +P +VR++G C E E + ++ME G L +L+ +R
Sbjct: 74 ELLAEANVMQQLD-NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR--------- 122
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ +++ +QV+ GM++L +HRDLAARNVL+ H K++DFG ++ L
Sbjct: 123 ----HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 178
Query: 161 TS-SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAE 219
+ Y+ ++ G+ P++W APE + FS KSD+WSFGVL+WE + G PY GM +E
Sbjct: 179 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 238
Query: 220 V 220
V
Sbjct: 239 V 239
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 137 bits (346), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 106/181 (58%), Gaps = 16/181 (8%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
+LL E VM+ LD +P +VR++G C E E + ++ME G L +L+ +R
Sbjct: 74 ELLAEANVMQQLD-NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR--------- 122
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ +++ +QV+ GM++L +HRDLAARNVL+ H K++DFG ++ L
Sbjct: 123 ----HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 178
Query: 161 TS-SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAE 219
+ Y+ ++ G+ P++W APE + FS KSD+WSFGVL+WE + G PY GM +E
Sbjct: 179 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 238
Query: 220 V 220
V
Sbjct: 239 V 239
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 137 bits (345), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 106/181 (58%), Gaps = 16/181 (8%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
+LL E VM+ LD +P +VR++G C E E + ++ME G L +L+ +R
Sbjct: 64 ELLAEANVMQQLD-NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR--------- 112
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ +++ +QV+ GM++L +HRDLAARNVL+ H K++DFG ++ L
Sbjct: 113 ----HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168
Query: 161 TS-SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAE 219
+ Y+ ++ G+ P++W APE + FS KSD+WSFGVL+WE + G PY GM +E
Sbjct: 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 228
Query: 220 V 220
V
Sbjct: 229 V 229
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 137 bits (345), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 106/181 (58%), Gaps = 16/181 (8%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
+LL E VM+ LD +P +VR++G C E E + ++ME G L +L+ +R
Sbjct: 72 ELLAEANVMQQLD-NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR--------- 120
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ +++ +QV+ GM++L +HRDLAARNVL+ H K++DFG ++ L
Sbjct: 121 ----HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 176
Query: 161 TS-SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAE 219
+ Y+ ++ G+ P++W APE + FS KSD+WSFGVL+WE + G PY GM +E
Sbjct: 177 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 236
Query: 220 V 220
V
Sbjct: 237 V 237
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 137 bits (345), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 106/181 (58%), Gaps = 16/181 (8%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
+LL E VM+ LD +P +VR++G C E E + ++ME G L +L+ +R
Sbjct: 417 ELLAEANVMQQLD-NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR--------- 465
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ +++ +QV+ GM++L +HRDLAARNVL+ H K++DFG ++ L
Sbjct: 466 ----HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 521
Query: 161 TS-SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAE 219
+ Y+ ++ G+ P++W APE + FS KSD+WSFGVL+WE + G PY GM +E
Sbjct: 522 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 581
Query: 220 V 220
V
Sbjct: 582 V 582
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 137 bits (345), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 111/197 (56%), Gaps = 15/197 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKT K++ + + E +MK LD HP++V+L+G E+EP ++IME PYG+L
Sbjct: 39 VAVKTCKKDCTLDNKEKFMSEAVIMKNLD-HPHIVKLIGI-IEEEPTWIIMELYPYGELG 96
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+L ++ NSL L + Q+ + M +L S +HRD+A RN+L+
Sbjct: 97 HYLERNK------------NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVAS 144
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
C K+ DFG +R + Y + S RLPI+WM+PES+ F+ SD+W F V +WEI
Sbjct: 145 PECVKLGDFGLSRYIEDEDYY-KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEI 203
Query: 205 VTLGSTPYPGMAAAEVM 221
++ G P+ + +V+
Sbjct: 204 LSFGKQPFFWLENKDVI 220
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 137 bits (345), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 106/181 (58%), Gaps = 16/181 (8%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
+LL E VM+ LD +P +VR++G C E E + ++ME G L +L+ +R
Sbjct: 416 ELLAEANVMQQLD-NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR--------- 464
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ +++ +QV+ GM++L +HRDLAARNVL+ H K++DFG ++ L
Sbjct: 465 ----HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 520
Query: 161 TS-SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAE 219
+ Y+ ++ G+ P++W APE + FS KSD+WSFGVL+WE + G PY GM +E
Sbjct: 521 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 580
Query: 220 V 220
V
Sbjct: 581 V 581
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 137 bits (344), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 111/197 (56%), Gaps = 15/197 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKT K++ + + E +MK LD HP++V+L+G E+EP ++IME PYG+L
Sbjct: 43 VAVKTCKKDCTLDNKEKFMSEAVIMKNLD-HPHIVKLIGI-IEEEPTWIIMELYPYGELG 100
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+L ++ NSL L + Q+ + M +L S +HRD+A RN+L+
Sbjct: 101 HYLERNK------------NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVAS 148
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
C K+ DFG +R + Y + S RLPI+WM+PES+ F+ SD+W F V +WEI
Sbjct: 149 PECVKLGDFGLSRYIEDEDYY-KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEI 207
Query: 205 VTLGSTPYPGMAAAEVM 221
++ G P+ + +V+
Sbjct: 208 LSFGKQPFFWLENKDVI 224
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 137 bits (344), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 109/203 (53%), Gaps = 16/203 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+KTLK E LQE VMK L H +V+L +E EP +++ EY+
Sbjct: 41 GTTRVAIKTLKPGTMSPEAF--LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSK 96
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL+ + L L Q+A GM ++ +HRDL A N+
Sbjct: 97 GCLLDFLKGEMGK-----------YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 145
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+GEN CKVADFG AR L+ + Y + + PI+W APE+ F++KSD+WSFG+L
Sbjct: 146 LVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 204
Query: 201 IWEIVTLGSTPYPGMAAAEVMKK 223
+ E+ T G PYPGM EV+ +
Sbjct: 205 LTELTTKGRVPYPGMVNREVLDQ 227
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 137 bits (344), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 111/197 (56%), Gaps = 15/197 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVKT K++ + + E +MK LD HP++V+L+G E+EP ++IME PYG+L
Sbjct: 55 VAVKTCKKDCTLDNKEKFMSEAVIMKNLD-HPHIVKLIGI-IEEEPTWIIMELYPYGELG 112
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+L ++ NSL L + Q+ + M +L S +HRD+A RN+L+
Sbjct: 113 HYLERNK------------NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVAS 160
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
C K+ DFG +R + Y + S RLPI+WM+PES+ F+ SD+W F V +WEI
Sbjct: 161 PECVKLGDFGLSRYIEDEDYY-KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEI 219
Query: 205 VTLGSTPYPGMAAAEVM 221
++ G P+ + +V+
Sbjct: 220 LSFGKQPFFWLENKDVI 236
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 136 bits (343), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 109/203 (53%), Gaps = 16/203 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+KTLK E LQE VMK L H +V+L +E EP +++ EY+
Sbjct: 38 GTTRVAIKTLKPGTMSPEAF--LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMNK 93
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL+ + L L Q+A GM ++ +HRDL A N+
Sbjct: 94 GSLLDFLKGETGK-----------YLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANI 142
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+GEN CKVADFG AR L+ + + + + PI+W APE+ F++KSD+WSFG+L
Sbjct: 143 LVGENLVCKVADFGLAR-LIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 201
Query: 201 IWEIVTLGSTPYPGMAAAEVMKK 223
+ E+ T G PYPGM EV+ +
Sbjct: 202 LTELTTKGRVPYPGMVNREVLDQ 224
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 136 bits (343), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 109/203 (53%), Gaps = 16/203 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+KTLK E LQE VMK L H +V+L +E EP ++++EY+
Sbjct: 41 GTTRVAIKTLKPGTMSPEAF--LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVIEYMSK 96
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL+ + L L Q+A GM ++ +HRDL A N+
Sbjct: 97 GSLLDFLKGEMGK-----------YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 145
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+GEN CKVADFG AR + + R+ + PI+W APE+ F++KSD+WSFG+L
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEXTARQG-AKFPIKWTAPEAALYGRFTIKSDVWSFGIL 204
Query: 201 IWEIVTLGSTPYPGMAAAEVMKK 223
+ E+ T G PYPGM EV+ +
Sbjct: 205 LTELTTKGRVPYPGMVNREVLDQ 227
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 111/203 (54%), Gaps = 16/203 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+KTLK E L+E +MK L H +V+L +E EP +++ EY+
Sbjct: 32 GNTKVAIKTLKPGTMSPE--SFLEEAQIMKKLK-HDKLVQLYAVVSE-EPIYIVTEYMNK 87
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL+ G+ +L +L QVA GM ++ IHRDL + N+
Sbjct: 88 GSLLDFLKD-----------GEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANI 136
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+G CK+ADFG AR + + R+ + PI+W APE+ F++KSD+WSFG+L
Sbjct: 137 LVGNGLICKIADFGLARLIEDNEXTARQG-AKFPIKWTAPEAALYGRFTIKSDVWSFGIL 195
Query: 201 IWEIVTLGSTPYPGMAAAEVMKK 223
+ E+VT G PYPGM EV+++
Sbjct: 196 LTELVTKGRVPYPGMNNREVLEQ 218
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 114/206 (55%), Gaps = 15/206 (7%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
R R+ VA+K LK+ + + ++++E +M LD +P +VRL+G C + E ++ME
Sbjct: 358 RMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD-NPYIVRLIGVC-QAEALMLVME 415
Query: 77 YVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLA 136
G L FL GK + ++ +QV+ GM++L + +HR+LA
Sbjct: 416 MAGGGPLHKFLV------------GKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLA 463
Query: 137 ARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
ARNVL+ H K++DFG ++ L S Y +S G+ P++W APE + FS +SD+W
Sbjct: 464 ARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVW 523
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
S+GV +WE ++ G PY M EVM
Sbjct: 524 SYGVTMWEALSYGQKPYKKMKGPEVM 549
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 107/200 (53%), Gaps = 16/200 (8%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+K +KE G + ++E VM L H +V+L G CT++ P F+I EY+
Sbjct: 27 GQYDVAIKMIKE--GSMSEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFIITEYMAN 83
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L ++LR R + ++ L C V M++L S+ +HRDLAARN
Sbjct: 84 GCLLNYLREMR------------HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC 131
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ + KV+DFG +R ++ Y + P+RW PE L + FS KSDIW+FGVL
Sbjct: 132 LVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 190
Query: 201 IWEIVTLGSTPYPGMAAAEV 220
+WEI +LG PY +E
Sbjct: 191 MWEIYSLGKMPYERFTNSET 210
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 107/200 (53%), Gaps = 16/200 (8%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+K +KE G + ++E VM L H +V+L G CT++ P F+I EY+
Sbjct: 32 GQYDVAIKMIKE--GSMSEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFIITEYMAN 88
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L ++LR R + ++ L C V M++L S+ +HRDLAARN
Sbjct: 89 GCLLNYLREMR------------HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC 136
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ + KV+DFG +R ++ Y + P+RW PE L + FS KSDIW+FGVL
Sbjct: 137 LVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 195
Query: 201 IWEIVTLGSTPYPGMAAAEV 220
+WEI +LG PY +E
Sbjct: 196 MWEIYSLGKMPYERFTNSET 215
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 107/200 (53%), Gaps = 16/200 (8%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+K +KE G + ++E VM L H +V+L G CT++ P F+I EY+
Sbjct: 32 GQYDVAIKMIKE--GSMSEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFIITEYMAN 88
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L ++LR R + ++ L C V M++L S+ +HRDLAARN
Sbjct: 89 GCLLNYLREMR------------HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC 136
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ + KV+DFG +R ++ Y + P+RW PE L + FS KSDIW+FGVL
Sbjct: 137 LVNDQGVVKVSDFGLSRYVLDDE-YTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 195
Query: 201 IWEIVTLGSTPYPGMAAAEV 220
+WEI +LG PY +E
Sbjct: 196 MWEIYSLGKMPYERFTNSET 215
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 107/200 (53%), Gaps = 16/200 (8%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+K +KE G + ++E VM L H +V+L G CT++ P F+I EY+
Sbjct: 31 GQYDVAIKMIKE--GSMSEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFIITEYMAN 87
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L ++LR R + ++ L C V M++L S+ +HRDLAARN
Sbjct: 88 GCLLNYLREMR------------HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC 135
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ + KV+DFG +R ++ Y + P+RW PE L + FS KSDIW+FGVL
Sbjct: 136 LVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 194
Query: 201 IWEIVTLGSTPYPGMAAAEV 220
+WEI +LG PY +E
Sbjct: 195 MWEIYSLGKMPYERFTNSET 214
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 107/200 (53%), Gaps = 16/200 (8%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+K +KE G + ++E VM L H +V+L G CT++ P F+I EY+
Sbjct: 38 GQYDVAIKMIKE--GSMSEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFIITEYMAN 94
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L ++LR R + ++ L C V M++L S+ +HRDLAARN
Sbjct: 95 GCLLNYLREMR------------HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC 142
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ + KV+DFG +R ++ Y + P+RW PE L + FS KSDIW+FGVL
Sbjct: 143 LVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 201
Query: 201 IWEIVTLGSTPYPGMAAAEV 220
+WEI +LG PY +E
Sbjct: 202 MWEIYSLGKMPYERFTNSET 221
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 107/200 (53%), Gaps = 16/200 (8%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+K +KE G + ++E VM L H +V+L G CT++ P F+I EY+
Sbjct: 47 GQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMAN 103
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L ++LR R + ++ L C V M++L S+ +HRDLAARN
Sbjct: 104 GCLLNYLREMR------------HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC 151
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ + KV+DFG +R ++ Y + P+RW PE L + FS KSDIW+FGVL
Sbjct: 152 LVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 210
Query: 201 IWEIVTLGSTPYPGMAAAEV 220
+WEI +LG PY +E
Sbjct: 211 MWEIYSLGKMPYERFTNSET 230
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 113/201 (56%), Gaps = 23/201 (11%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTE-KEPFFVIMEYVPYGKL 83
VAVK +K +A + L E +VM L H N+V+LLG E K +++ EY+ G L
Sbjct: 38 VAVKCIKNDATAQA---FLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 93
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRD-LTSFCYQVARGMQFLSSRGIIHRDLAARNVLI 142
+LRS + S+ D L F V M++L +HRDLAARNVL+
Sbjct: 94 VDYLRS------------RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV 141
Query: 143 GENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
E++ KV+DFG ++ ++ + G+LP++W APE+L + FS KSD+WSFG+L+W
Sbjct: 142 SEDNVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLW 196
Query: 203 EIVTLGSTPYPGMAAAEVMKK 223
EI + G PYP + +V+ +
Sbjct: 197 EIYSFGRVPYPRIPLKDVVPR 217
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 113/201 (56%), Gaps = 23/201 (11%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTE-KEPFFVIMEYVPYGKL 83
VAVK +K +A + L E +VM L H N+V+LLG E K +++ EY+ G L
Sbjct: 47 VAVKCIKNDATAQA---FLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 102
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRD-LTSFCYQVARGMQFLSSRGIIHRDLAARNVLI 142
+LRS + S+ D L F V M++L +HRDLAARNVL+
Sbjct: 103 VDYLRS------------RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV 150
Query: 143 GENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
E++ KV+DFG ++ ++ + G+LP++W APE+L + FS KSD+WSFG+L+W
Sbjct: 151 SEDNVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLW 205
Query: 203 EIVTLGSTPYPGMAAAEVMKK 223
EI + G PYP + +V+ +
Sbjct: 206 EIYSFGRVPYPRIPLKDVVPR 226
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 134 bits (338), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 112/199 (56%), Gaps = 23/199 (11%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTE-KEPFFVIMEYVPYGKL 83
VAVK +K +A + L E +VM L H N+V+LLG E K +++ EY+ G L
Sbjct: 32 VAVKCIKNDATAQA---FLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 87
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRD-LTSFCYQVARGMQFLSSRGIIHRDLAARNVLI 142
+LRS + S+ D L F V M++L +HRDLAARNVL+
Sbjct: 88 VDYLRS------------RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV 135
Query: 143 GENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
E++ KV+DFG ++ ++ + G+LP++W APE+L + FS KSD+WSFG+L+W
Sbjct: 136 SEDNVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLW 190
Query: 203 EIVTLGSTPYPGMAAAEVM 221
EI + G PYP + +V+
Sbjct: 191 EIYSFGRVPYPRIPLKDVV 209
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 134 bits (338), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 113/201 (56%), Gaps = 23/201 (11%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTE-KEPFFVIMEYVPYGKL 83
VAVK +K +A + L E +VM L H N+V+LLG E K +++ EY+ G L
Sbjct: 219 VAVKCIKNDATAQA---FLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRD-LTSFCYQVARGMQFLSSRGIIHRDLAARNVLI 142
+LRS + S+ D L F V M++L +HRDLAARNVL+
Sbjct: 275 VDYLRS------------RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV 322
Query: 143 GENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIW 202
E++ KV+DFG ++ ++ + G+LP++W APE+L + FS KSD+WSFG+L+W
Sbjct: 323 SEDNVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLW 377
Query: 203 EIVTLGSTPYPGMAAAEVMKK 223
EI + G PYP + +V+ +
Sbjct: 378 EIYSFGRVPYPRIPLKDVVPR 398
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 134 bits (337), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 109/204 (53%), Gaps = 24/204 (11%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+K +KE G + ++E VM L H +V+L G CT++ P F+I EY+
Sbjct: 47 GQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMAN 103
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L ++LR R + ++ L C V M++L S+ +HRDLAARN
Sbjct: 104 GCLLNYLREMR------------HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC 151
Query: 141 LIGENHCCKVADFGFAR----DLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWS 196
L+ + KV+DFG +R D TSSV + P+RW PE L + FS KSDIW+
Sbjct: 152 LVNDQGVVKVSDFGLSRYVLDDEETSSV-----GSKFPVRWSPPEVLMYSKFSSKSDIWA 206
Query: 197 FGVLIWEIVTLGSTPYPGMAAAEV 220
FGVL+WEI +LG PY +E
Sbjct: 207 FGVLMWEIYSLGKMPYERFTNSET 230
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 134 bits (336), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 107/203 (52%), Gaps = 16/203 (7%)
Query: 21 GPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
G VA+KTLK E LQE VMK L H +V+L +E EP ++ EY+
Sbjct: 31 GTTRVAIKTLKPGTMSPEAF--LQEAQVMKKLR-HEKLVQLYAVVSE-EPIXIVTEYMSK 86
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G L FL+ + L L Q+A GM ++ +HRDL A N+
Sbjct: 87 GSLLDFLKGETGK-----------YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 135
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+GEN CKVADFG AR + + R+ + PI+W APE+ F++KSD+WSFG+L
Sbjct: 136 LVGENLVCKVADFGLARLIEDNEXTARQG-AKFPIKWTAPEAALYGRFTIKSDVWSFGIL 194
Query: 201 IWEIVTLGSTPYPGMAAAEVMKK 223
+ E+ T G PYPGM EV+ +
Sbjct: 195 LTELTTKGRVPYPGMVNREVLDQ 217
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 110/196 (56%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
V +K +++ +G + + + + +LD H ++VRLLG C ++ +Y+P G L
Sbjct: 63 VCIKVIEDKSGRQSFQAVTDHMLAIGSLD-HAHIVRLLGLCPGSS-LQLVTQYLPLGSLL 120
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+R R +L + L ++ Q+A+GM +L G++HR+LAARNVL+
Sbjct: 121 DHVRQHRG------------ALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKS 168
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+VADFG A L SE + PI+WMA ES++ ++ +SD+WS+GV +WE+
Sbjct: 169 PSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWEL 228
Query: 205 VTLGSTPYPGMAAAEV 220
+T G+ PY G+ AEV
Sbjct: 229 MTFGAEPYAGLRLAEV 244
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 110/196 (56%), Gaps = 14/196 (7%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
V +K +++ +G + + + + +LD H ++VRLLG C ++ +Y+P G L
Sbjct: 45 VCIKVIEDKSGRQSFQAVTDHMLAIGSLD-HAHIVRLLGLCPGSS-LQLVTQYLPLGSLL 102
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+R R +L + L ++ Q+A+GM +L G++HR+LAARNVL+
Sbjct: 103 DHVRQHRG------------ALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKS 150
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+VADFG A L SE + PI+WMA ES++ ++ +SD+WS+GV +WE+
Sbjct: 151 PSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWEL 210
Query: 205 VTLGSTPYPGMAAAEV 220
+T G+ PY G+ AEV
Sbjct: 211 MTFGAEPYAGLRLAEV 226
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 119/207 (57%), Gaps = 24/207 (11%)
Query: 5 SVEV-RKHPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV---R 60
SVE+ R P+ G +VAVK L+ + +++R D +E+ ++K L H + + R
Sbjct: 38 SVELCRYDPLGDNTG----ALVAVKQLQHSGPDQQR-DFQREIQILKAL--HSDFIVKYR 90
Query: 61 LLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVAR 120
+ ++ ++MEY+P G L+ FL+ RA+ L + L + Q+ +
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR------------LDASRLLLYSSQICK 138
Query: 121 GMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMA 179
GM++L SR +HRDLAARN+L+ K+ADFG A+ L + Y + G+ PI W A
Sbjct: 139 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA 198
Query: 180 PESLYDNIFSVKSDIWSFGVLIWEIVT 206
PESL DNIFS +SD+WSFGV+++E+ T
Sbjct: 199 PESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 119/207 (57%), Gaps = 24/207 (11%)
Query: 5 SVEV-RKHPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV---R 60
SVE+ R P+ G +VAVK L+ + +++R D +E+ ++K L H + + R
Sbjct: 25 SVELCRYDPLGDNTG----ALVAVKQLQHSGPDQQR-DFQREIQILKAL--HSDFIVKYR 77
Query: 61 LLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVAR 120
+ ++ ++MEY+P G L+ FL+ RA+ L + L + Q+ +
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR------------LDASRLLLYSSQICK 125
Query: 121 GMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMA 179
GM++L SR +HRDLAARN+L+ K+ADFG A+ L + Y + G+ PI W A
Sbjct: 126 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA 185
Query: 180 PESLYDNIFSVKSDIWSFGVLIWEIVT 206
PESL DNIFS +SD+WSFGV+++E+ T
Sbjct: 186 PESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 122 bits (306), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 119/207 (57%), Gaps = 24/207 (11%)
Query: 5 SVEV-RKHPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV---R 60
SVE+ R P+ G +VAVK L+ + +++R D +E+ ++K L H + + R
Sbjct: 26 SVELCRYDPLGDNTG----ALVAVKQLQHSGPDQQR-DFQREIQILKAL--HSDFIVKYR 78
Query: 61 LLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVAR 120
+ ++ ++MEY+P G L+ FL+ RA+ L + L + Q+ +
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR------------LDASRLLLYSSQICK 126
Query: 121 GMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMA 179
GM++L SR +HRDLAARN+L+ K+ADFG A+ L + Y + G+ PI W A
Sbjct: 127 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA 186
Query: 180 PESLYDNIFSVKSDIWSFGVLIWEIVT 206
PESL DNIFS +SD+WSFGV+++E+ T
Sbjct: 187 PESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 114/206 (55%), Gaps = 22/206 (10%)
Query: 5 SVEV-RKHPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLG 63
SVE+ R P+ G +VAVK L+ + E R D +E+ ++K+L H N+V+ G
Sbjct: 25 SVEMCRYDPLQDNTGE----VVAVKKLQHSTEEHLR-DFEREIEILKSLQ-HDNIVKYKG 78
Query: 64 CCTE--KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARG 121
C + +IMEY+PYG L+ +L+ + + + L + Q+ +G
Sbjct: 79 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER------------IDHIKLLQYTSQICKG 126
Query: 122 MQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAP 180
M++L ++ IHRDLA RN+L+ + K+ DFG + L ++ K G PI W AP
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAP 186
Query: 181 ESLYDNIFSVKSDIWSFGVLIWEIVT 206
ESL ++ FSV SD+WSFGV+++E+ T
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 114/206 (55%), Gaps = 22/206 (10%)
Query: 5 SVEV-RKHPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLG 63
SVE+ R P+ G +VAVK L+ + E R D +E+ ++K+L H N+V+ G
Sbjct: 26 SVEMCRYDPLQDNTGE----VVAVKKLQHSTEEHLR-DFEREIEILKSLQ-HDNIVKYKG 79
Query: 64 CCTE--KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARG 121
C + +IMEY+PYG L+ +L+ + + + L + Q+ +G
Sbjct: 80 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER------------IDHIKLLQYTSQICKG 127
Query: 122 MQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAP 180
M++L ++ IHR+LA RN+L+ + K+ DFG + L Y+ K G PI W AP
Sbjct: 128 MEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAP 187
Query: 181 ESLYDNIFSVKSDIWSFGVLIWEIVT 206
ESL ++ FSV SD+WSFGV+++E+ T
Sbjct: 188 ESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 120 bits (300), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 22/206 (10%)
Query: 5 SVEV-RKHPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLG 63
SVE+ R P+ G +VAVK L+ + E R D +E+ ++K+L H N+V+ G
Sbjct: 56 SVEMCRYDPLQDNTGE----VVAVKKLQHSTEEHLR-DFEREIEILKSLQ-HDNIVKYKG 109
Query: 64 CCTE--KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARG 121
C + +IMEY+PYG L+ +L+ + + + L + Q+ +G
Sbjct: 110 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER------------IDHIKLLQYTSQICKG 157
Query: 122 MQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAP 180
M++L ++ IHRDLA RN+L+ + K+ DFG + L + K G PI W AP
Sbjct: 158 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 217
Query: 181 ESLYDNIFSVKSDIWSFGVLIWEIVT 206
ESL ++ FSV SD+WSFGV+++E+ T
Sbjct: 218 ESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 120 bits (300), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 22/206 (10%)
Query: 5 SVEV-RKHPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLG 63
SVE+ R P+ G +VAVK L+ + E R D +E+ ++K+L H N+V+ G
Sbjct: 43 SVEMCRYDPLQDNTGE----VVAVKKLQHSTEEHLR-DFEREIEILKSLQ-HDNIVKYKG 96
Query: 64 CCTE--KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARG 121
C + +IMEY+PYG L+ +L+ + + + L + Q+ +G
Sbjct: 97 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER------------IDHIKLLQYTSQICKG 144
Query: 122 MQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAP 180
M++L ++ IHRDLA RN+L+ + K+ DFG + L + K G PI W AP
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 181 ESLYDNIFSVKSDIWSFGVLIWEIVT 206
ESL ++ FSV SD+WSFGV+++E+ T
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 120 bits (300), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 22/206 (10%)
Query: 5 SVEV-RKHPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLG 63
SVE+ R P+ G +VAVK L+ + E R D +E+ ++K+L H N+V+ G
Sbjct: 25 SVEMCRYDPLQDNTGE----VVAVKKLQHSTEEHLR-DFEREIEILKSLQ-HDNIVKYKG 78
Query: 64 CCTE--KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARG 121
C + +IMEY+PYG L+ +L+ + + + L + Q+ +G
Sbjct: 79 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER------------IDHIKLLQYTSQICKG 126
Query: 122 MQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAP 180
M++L ++ IHRDLA RN+L+ + K+ DFG + L + K G PI W AP
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 186
Query: 181 ESLYDNIFSVKSDIWSFGVLIWEIVT 206
ESL ++ FSV SD+WSFGV+++E+ T
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 120 bits (300), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 22/206 (10%)
Query: 5 SVEV-RKHPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLG 63
SVE+ R P+ G +VAVK L+ + E R D +E+ ++K+L H N+V+ G
Sbjct: 23 SVEMCRYDPLQDNTGE----VVAVKKLQHSTEEHLR-DFEREIEILKSLQ-HDNIVKYKG 76
Query: 64 CCTE--KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARG 121
C + +IMEY+PYG L+ +L+ + + + L + Q+ +G
Sbjct: 77 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER------------IDHIKLLQYTSQICKG 124
Query: 122 MQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAP 180
M++L ++ IHRDLA RN+L+ + K+ DFG + L + K G PI W AP
Sbjct: 125 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 184
Query: 181 ESLYDNIFSVKSDIWSFGVLIWEIVT 206
ESL ++ FSV SD+WSFGV+++E+ T
Sbjct: 185 ESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 120 bits (300), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 22/206 (10%)
Query: 5 SVEV-RKHPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLG 63
SVE+ R P+ G +VAVK L+ + E R D +E+ ++K+L H N+V+ G
Sbjct: 32 SVEMCRYDPLQDNTGE----VVAVKKLQHSTEEHLR-DFEREIEILKSLQ-HDNIVKYKG 85
Query: 64 CCTE--KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARG 121
C + +IMEY+PYG L+ +L+ + + + L + Q+ +G
Sbjct: 86 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER------------IDHIKLLQYTSQICKG 133
Query: 122 MQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAP 180
M++L ++ IHRDLA RN+L+ + K+ DFG + L + K G PI W AP
Sbjct: 134 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 193
Query: 181 ESLYDNIFSVKSDIWSFGVLIWEIVT 206
ESL ++ FSV SD+WSFGV+++E+ T
Sbjct: 194 ESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 120 bits (300), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 22/206 (10%)
Query: 5 SVEV-RKHPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLG 63
SVE+ R P+ G +VAVK L+ + E R D +E+ ++K+L H N+V+ G
Sbjct: 25 SVEMCRYDPLQDNTGE----VVAVKKLQHSTEEHLR-DFEREIEILKSLQ-HDNIVKYKG 78
Query: 64 CCTE--KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARG 121
C + +IMEY+PYG L+ +L+ + + + L + Q+ +G
Sbjct: 79 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER------------IDHIKLLQYTSQICKG 126
Query: 122 MQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAP 180
M++L ++ IHRDLA RN+L+ + K+ DFG + L + K G PI W AP
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 186
Query: 181 ESLYDNIFSVKSDIWSFGVLIWEIVT 206
ESL ++ FSV SD+WSFGV+++E+ T
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 120 bits (300), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 104/186 (55%), Gaps = 18/186 (9%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEK--EPFFVIMEYVPYG 81
+VAVK LK + G + R QE+ +++TL H ++++ GCC ++ + ++MEYVP G
Sbjct: 45 MVAVKALKADCGPQHRSGWKQEIDILRTLY-HEHIIKYKGCCEDQGEKSLQLVMEYVPLG 103
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L+ +L +S+ L F Q+ GM +L S+ IHR+LAARNVL
Sbjct: 104 SLRDYL--------------PRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVL 149
Query: 142 IGENHCCKVADFGFARDLMTSSVYER-KSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
+ + K+ DFG A+ + Y R + +G P+ W APE L + F SD+WSFGV
Sbjct: 150 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT 209
Query: 201 IWEIVT 206
++E++T
Sbjct: 210 LYELLT 215
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 120 bits (300), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 102/186 (54%), Gaps = 18/186 (9%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEK--EPFFVIMEYVPYG 81
+VAVK LK +AG + R QE+ +++TL H ++++ GCC + ++MEYVP G
Sbjct: 62 MVAVKALKADAGPQHRSGWKQEIDILRTLY-HEHIIKYKGCCEDAGAASLQLVMEYVPLG 120
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L+ +L +S+ L F Q+ GM +L ++ IHRDLAARNVL
Sbjct: 121 SLRDYL--------------PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVL 166
Query: 142 IGENHCCKVADFGFARDLMTS-SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
+ + K+ DFG A+ + Y + +G P+ W APE L + F SD+WSFGV
Sbjct: 167 LDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT 226
Query: 201 IWEIVT 206
++E++T
Sbjct: 227 LYELLT 232
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 120 bits (300), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 115/206 (55%), Gaps = 22/206 (10%)
Query: 5 SVEV-RKHPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLG 63
SVE+ R P+ G +VAVK L+ + E R D +E+ ++K+L H N+V+ G
Sbjct: 28 SVEMCRYDPLQDNTGE----VVAVKKLQHSTEEHLR-DFEREIEILKSLQ-HDNIVKYKG 81
Query: 64 CCTE--KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARG 121
C + +IMEY+PYG L+ +L++ A+R + L + Q+ +G
Sbjct: 82 VCYSAGRRNLKLIMEYLPYGSLRDYLQA-HAER-----------IDHIKLLQYTSQICKG 129
Query: 122 MQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAP 180
M++L ++ IHRDLA RN+L+ + K+ DFG + L + K G PI W AP
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 181 ESLYDNIFSVKSDIWSFGVLIWEIVT 206
ESL ++ FSV SD+WSFGV+++E+ T
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 120 bits (300), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 22/206 (10%)
Query: 5 SVEV-RKHPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLG 63
SVE+ R P+ G +VAVK L+ + E R D +E+ ++K+L H N+V+ G
Sbjct: 28 SVEMCRYDPLQDNTGE----VVAVKKLQHSTEEHLR-DFEREIEILKSLQ-HDNIVKYKG 81
Query: 64 CCTE--KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARG 121
C + +IMEY+PYG L+ +L+ + + + L + Q+ +G
Sbjct: 82 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER------------IDHIKLLQYTSQICKG 129
Query: 122 MQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAP 180
M++L ++ IHRDLA RN+L+ + K+ DFG + L + K G PI W AP
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 181 ESLYDNIFSVKSDIWSFGVLIWEIVT 206
ESL ++ FSV SD+WSFGV+++E+ T
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 120 bits (300), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 22/206 (10%)
Query: 5 SVEV-RKHPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLG 63
SVE+ R P+ G +VAVK L+ + E R D +E+ ++K+L H N+V+ G
Sbjct: 30 SVEMCRYDPLQDNTGE----VVAVKKLQHSTEEHLR-DFEREIEILKSLQ-HDNIVKYKG 83
Query: 64 CCTE--KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARG 121
C + +IMEY+PYG L+ +L+ + + + L + Q+ +G
Sbjct: 84 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER------------IDHIKLLQYTSQICKG 131
Query: 122 MQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAP 180
M++L ++ IHRDLA RN+L+ + K+ DFG + L + K G PI W AP
Sbjct: 132 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 191
Query: 181 ESLYDNIFSVKSDIWSFGVLIWEIVT 206
ESL ++ FSV SD+WSFGV+++E+ T
Sbjct: 192 ESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 120 bits (300), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 22/206 (10%)
Query: 5 SVEV-RKHPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLG 63
SVE+ R P+ G +VAVK L+ + E R D +E+ ++K+L H N+V+ G
Sbjct: 24 SVEMCRYDPLQDNTGE----VVAVKKLQHSTEEHLR-DFEREIEILKSLQ-HDNIVKYKG 77
Query: 64 CCTE--KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARG 121
C + +IMEY+PYG L+ +L+ + + + L + Q+ +G
Sbjct: 78 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER------------IDHIKLLQYTSQICKG 125
Query: 122 MQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAP 180
M++L ++ IHRDLA RN+L+ + K+ DFG + L + K G PI W AP
Sbjct: 126 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 185
Query: 181 ESLYDNIFSVKSDIWSFGVLIWEIVT 206
ESL ++ FSV SD+WSFGV+++E+ T
Sbjct: 186 ESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 120 bits (300), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 22/206 (10%)
Query: 5 SVEV-RKHPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLG 63
SVE+ R P+ G +VAVK L+ + E R D +E+ ++K+L H N+V+ G
Sbjct: 31 SVEMCRYDPLQDNTGE----VVAVKKLQHSTEEHLR-DFEREIEILKSLQ-HDNIVKYKG 84
Query: 64 CCTE--KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARG 121
C + +IMEY+PYG L+ +L+ + + + L + Q+ +G
Sbjct: 85 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER------------IDHIKLLQYTSQICKG 132
Query: 122 MQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAP 180
M++L ++ IHRDLA RN+L+ + K+ DFG + L + K G PI W AP
Sbjct: 133 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 192
Query: 181 ESLYDNIFSVKSDIWSFGVLIWEIVT 206
ESL ++ FSV SD+WSFGV+++E+ T
Sbjct: 193 ESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 119 bits (299), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 22/206 (10%)
Query: 5 SVEV-RKHPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLG 63
SVE+ R P+ G +VAVK L+ + E R D +E+ ++K+L H N+V+ G
Sbjct: 29 SVEMCRYDPLQDNTGE----VVAVKKLQHSTEEHLR-DFEREIEILKSLQ-HDNIVKYKG 82
Query: 64 CCTE--KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARG 121
C + +IMEY+PYG L+ +L+ + + + L + Q+ +G
Sbjct: 83 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER------------IDHIKLLQYTSQICKG 130
Query: 122 MQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAP 180
M++L ++ IHRDLA RN+L+ + K+ DFG + L + K G PI W AP
Sbjct: 131 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 190
Query: 181 ESLYDNIFSVKSDIWSFGVLIWEIVT 206
ESL ++ FSV SD+WSFGV+++E+ T
Sbjct: 191 ESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 22/206 (10%)
Query: 5 SVEV-RKHPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLG 63
SVE+ R P+ G +VAVK L+ + E R D +E+ ++K+L H N+V+ G
Sbjct: 43 SVEMCRYDPLQDNTGE----VVAVKKLQHSTEEHLR-DFEREIEILKSLQ-HDNIVKYKG 96
Query: 64 CCTE--KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARG 121
C + +IMEY+PYG L+ +L+ + + + L + Q+ +G
Sbjct: 97 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER------------IDHIKLLQYTSQICKG 144
Query: 122 MQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAP 180
M++L ++ IHRDLA RN+L+ + K+ DFG + L + K G PI W AP
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 181 ESLYDNIFSVKSDIWSFGVLIWEIVT 206
ESL ++ FSV SD+WSFGV+++E+ T
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 103/195 (52%), Gaps = 16/195 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEK--EPFFVIMEYVPYGK 82
VAVK+LK +G DL +E+ +++ L H N+V+ G CTE +IME++P G
Sbjct: 53 VAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGNGIKLIMEFLPSGS 111
Query: 83 LQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI 142
L+ +L ++ N + + + Q+ +GM +L SR +HRDLAARNVL+
Sbjct: 112 LKEYLPKNK------------NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV 159
Query: 143 GENHCCKVADFGFARDLMTSSVYERKSEGR-LPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
H K+ DFG + + T + R P+ W APE L + F + SD+WSFGV +
Sbjct: 160 ESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTL 219
Query: 202 WEIVTLGSTPYPGMA 216
E++T + MA
Sbjct: 220 HELLTYCDSDSSPMA 234
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 104/186 (55%), Gaps = 18/186 (9%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEK--EPFFVIMEYVPYG 81
+VAVK LK + G + R QE+ +++TL H ++++ GCC ++ + ++MEYVP G
Sbjct: 45 MVAVKALKADCGPQHRSGWKQEIDILRTLY-HEHIIKYKGCCEDQGEKSLQLVMEYVPLG 103
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L+ +L +S+ L F Q+ GM +L ++ IHR+LAARNVL
Sbjct: 104 SLRDYL--------------PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVL 149
Query: 142 IGENHCCKVADFGFARDLMTSSVYER-KSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
+ + K+ DFG A+ + Y R + +G P+ W APE L + F SD+WSFGV
Sbjct: 150 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT 209
Query: 201 IWEIVT 206
++E++T
Sbjct: 210 LYELLT 215
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 103/195 (52%), Gaps = 16/195 (8%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEK--EPFFVIMEYVPYGK 82
VAVK+LK +G DL +E+ +++ L H N+V+ G CTE +IME++P G
Sbjct: 41 VAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGNGIKLIMEFLPSGS 99
Query: 83 LQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI 142
L+ +L ++ N + + + Q+ +GM +L SR +HRDLAARNVL+
Sbjct: 100 LKEYLPKNK------------NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV 147
Query: 143 GENHCCKVADFGFARDLMTSSVYERKSEGR-LPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
H K+ DFG + + T + R P+ W APE L + F + SD+WSFGV +
Sbjct: 148 ESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTL 207
Query: 202 WEIVTLGSTPYPGMA 216
E++T + MA
Sbjct: 208 HELLTYCDSDSSPMA 222
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 113/206 (54%), Gaps = 22/206 (10%)
Query: 5 SVEV-RKHPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLG 63
SVE+ R P+ G +VAVK L+ + E R D +E+ ++K+L H N+V+ G
Sbjct: 28 SVEMCRYDPLQDNTGE----VVAVKKLQHSTEEHLR-DFEREIEILKSLQ-HDNIVKYKG 81
Query: 64 CCTE--KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARG 121
C + +IME++PYG L+ +L+ + + + L + Q+ +G
Sbjct: 82 VCYSAGRRNLKLIMEFLPYGSLREYLQKHKER------------IDHIKLLQYTSQICKG 129
Query: 122 MQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAP 180
M++L ++ IHRDLA RN+L+ + K+ DFG + L + K G PI W AP
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 181 ESLYDNIFSVKSDIWSFGVLIWEIVT 206
ESL ++ FSV SD+WSFGV+++E+ T
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 117 bits (294), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 24/207 (11%)
Query: 5 SVEV-RKHPMSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV---R 60
SVE+ R P+ G +VAVK L+ + +++R D +E+ ++K L H + + R
Sbjct: 22 SVELCRYDPLGDNTG----ALVAVKQLQHSGPDQQR-DFQREIQILKAL--HSDFIVKYR 74
Query: 61 LLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVAR 120
+ + ++MEY+P G L+ FL+ RA+ L + L + Q+ +
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR------------LDASRLLLYSSQICK 122
Query: 121 GMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMA 179
GM++L SR +HRDLAARN+L+ K+ADFG A+ L + + G+ PI W A
Sbjct: 123 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYA 182
Query: 180 PESLYDNIFSVKSDIWSFGVLIWEIVT 206
PESL DNIFS +SD+WSFGV+++E+ T
Sbjct: 183 PESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 117 bits (293), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 25 VAVKTLKENAGERERL--DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGK 82
VAVK LK + + D ++E+ M +LD H N++RL G P ++ E P G
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLIRLYGVVL-TPPMKMVTELAPLGS 106
Query: 83 LQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI 142
L LR + L+ + QVA GM +L S+ IHRDLAARN+L+
Sbjct: 107 LLDRLRKHQGHFLLGT------------LSRYAVQVAEGMGYLESKRFIHRDLAARNLLL 154
Query: 143 GENHCCKVADFGFARDLMTSSVYERKSEGR-LPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
K+ DFG R L + + E R +P W APESL FS SD W FGV +
Sbjct: 155 ATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 214
Query: 202 WEIVTLGSTPYPGMAAAEVMKK 223
WE+ T G P+ G+ ++++ K
Sbjct: 215 WEMFTYGQEPWIGLNGSQILHK 236
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 117 bits (293), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 107/200 (53%), Gaps = 17/200 (8%)
Query: 25 VAVKTLKENAGERERLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
VAVK L E ER++ L+E+ +MK L HPN+V +G T+ ++ EY+ G L
Sbjct: 63 VAVKILMEQDFHAERVNEFLREVAIMKRLR-HPNIVLFMGAVTQPPNLSIVTEYLSRGSL 121
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRG--IIHRDLAARNVL 141
L S G L R S Y VA+GM +L +R I+HR+L + N+L
Sbjct: 122 YRLLHKS----------GAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLL 171
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ + + KV DFG +R L S+ KS P WMAPE L D + KSD++SFGV++
Sbjct: 172 VDKKYTVKVCDFGLSR-LKASTFLSSKSAAGTP-EWMAPEVLRDEPSNEKSDVYSFGVIL 229
Query: 202 WEIVTLGSTPYPGMAAAEVM 221
WE+ TL P+ + A+V+
Sbjct: 230 WELATL-QQPWGNLNPAQVV 248
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 117 bits (292), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 25 VAVKTLKENAGERERL--DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGK 82
VAVK LK + + D ++E+ M +LD H N++RL G P ++ E P G
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLIRLYGVVL-TPPMKMVTELAPLGS 96
Query: 83 LQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI 142
L LR + L+ + QVA GM +L S+ IHRDLAARN+L+
Sbjct: 97 LLDRLRKHQGHFLLGT------------LSRYAVQVAEGMGYLESKRFIHRDLAARNLLL 144
Query: 143 GENHCCKVADFGFARDLMTSSVYERKSEGR-LPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
K+ DFG R L + + E R +P W APESL FS SD W FGV +
Sbjct: 145 ATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 204
Query: 202 WEIVTLGSTPYPGMAAAEVMKK 223
WE+ T G P+ G+ ++++ K
Sbjct: 205 WEMFTYGQEPWIGLNGSQILHK 226
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 117 bits (292), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 99/202 (49%), Gaps = 17/202 (8%)
Query: 25 VAVKTLKENAGERERL--DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGK 82
VAVK LK + + D ++E+ M +LD H N++RL G P ++ E P G
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLIRLYGVVL-TPPMKMVTELAPLGS 106
Query: 83 LQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI 142
L LR + L+ + QVA GM +L S+ IHRDLAARN+L+
Sbjct: 107 LLDRLRKHQGHFLLGT------------LSRYAVQVAEGMGYLESKRFIHRDLAARNLLL 154
Query: 143 GENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
K+ DFG R L Y + ++P W APESL FS SD W FGV +
Sbjct: 155 ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 214
Query: 202 WEIVTLGSTPYPGMAAAEVMKK 223
WE+ T G P+ G+ ++++ K
Sbjct: 215 WEMFTYGQEPWIGLNGSQILHK 236
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 117 bits (292), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 99/202 (49%), Gaps = 17/202 (8%)
Query: 25 VAVKTLKENAGERERL--DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGK 82
VAVK LK + + D ++E+ M +LD H N++RL G P ++ E P G
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLIRLYGVVL-TPPMKMVTELAPLGS 96
Query: 83 LQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI 142
L LR + L+ + QVA GM +L S+ IHRDLAARN+L+
Sbjct: 97 LLDRLRKHQGHFLLGT------------LSRYAVQVAEGMGYLESKRFIHRDLAARNLLL 144
Query: 143 GENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
K+ DFG R L Y + ++P W APESL FS SD W FGV +
Sbjct: 145 ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 204
Query: 202 WEIVTLGSTPYPGMAAAEVMKK 223
WE+ T G P+ G+ ++++ K
Sbjct: 205 WEMFTYGQEPWIGLNGSQILHK 226
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 117 bits (292), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 99/202 (49%), Gaps = 17/202 (8%)
Query: 25 VAVKTLKENAGERERL--DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGK 82
VAVK LK + + D ++E+ M +LD H N++RL G P ++ E P G
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLIRLYGVVL-TPPMKMVTELAPLGS 96
Query: 83 LQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI 142
L LR + L+ + QVA GM +L S+ IHRDLAARN+L+
Sbjct: 97 LLDRLRKHQGHFLLGT------------LSRYAVQVAEGMGYLESKRFIHRDLAARNLLL 144
Query: 143 GENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
K+ DFG R L Y + ++P W APESL FS SD W FGV +
Sbjct: 145 ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 204
Query: 202 WEIVTLGSTPYPGMAAAEVMKK 223
WE+ T G P+ G+ ++++ K
Sbjct: 205 WEMFTYGQEPWIGLNGSQILHK 226
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 117 bits (292), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 99/202 (49%), Gaps = 17/202 (8%)
Query: 25 VAVKTLKENAGERERL--DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGK 82
VAVK LK + + D ++E+ M +LD H N++RL G P ++ E P G
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLIRLYGVVL-TPPMKMVTELAPLGS 100
Query: 83 LQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI 142
L LR + L+ + QVA GM +L S+ IHRDLAARN+L+
Sbjct: 101 LLDRLRKHQGHFLLGT------------LSRYAVQVAEGMGYLESKRFIHRDLAARNLLL 148
Query: 143 GENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
K+ DFG R L Y + ++P W APESL FS SD W FGV +
Sbjct: 149 ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 208
Query: 202 WEIVTLGSTPYPGMAAAEVMKK 223
WE+ T G P+ G+ ++++ K
Sbjct: 209 WEMFTYGQEPWIGLNGSQILHK 230
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 99/202 (49%), Gaps = 17/202 (8%)
Query: 25 VAVKTLKENAGERERL--DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGK 82
VAVK LK + + D ++E+ M +LD H N++RL G P ++ E P G
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLIRLYGVVL-TPPMKMVTELAPLGS 100
Query: 83 LQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI 142
L LR + L+ + QVA GM +L S+ IHRDLAARN+L+
Sbjct: 101 LLDRLRKHQGHFLLGT------------LSRYAVQVAEGMGYLESKRFIHRDLAARNLLL 148
Query: 143 GENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
K+ DFG R L Y + ++P W APESL FS SD W FGV +
Sbjct: 149 ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 208
Query: 202 WEIVTLGSTPYPGMAAAEVMKK 223
WE+ T G P+ G+ ++++ K
Sbjct: 209 WEMFTYGQEPWIGLNGSQILHK 230
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 116 bits (291), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 105/200 (52%), Gaps = 17/200 (8%)
Query: 25 VAVKTLKENAGERERLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
VAVK L E ER++ L+E+ +MK L HPN+V +G T+ ++ EY+ G L
Sbjct: 63 VAVKILMEQDFHAERVNEFLREVAIMKRLR-HPNIVLFMGAVTQPPNLSIVTEYLSRGSL 121
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRG--IIHRDLAARNVL 141
L S G L R S Y VA+GM +L +R I+HRDL + N+L
Sbjct: 122 YRLLHKS----------GAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLL 171
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ + + KV DFG +R L S K P WMAPE L D + KSD++SFGV++
Sbjct: 172 VDKKYTVKVCDFGLSR-LKASXFLXSKXAAGTP-EWMAPEVLRDEPSNEKSDVYSFGVIL 229
Query: 202 WEIVTLGSTPYPGMAAAEVM 221
WE+ TL P+ + A+V+
Sbjct: 230 WELATL-QQPWGNLNPAQVV 248
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 114 bits (284), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 102/186 (54%), Gaps = 18/186 (9%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEK--EPFFVIMEYVPYG 81
+VAVK LKE G + R +E+ +++TL H ++V+ GCC ++ + ++MEYVP G
Sbjct: 40 MVAVKALKEGCGPQLRSGWQREIEILRTLY-HEHIVKYKGCCEDQGEKSVQLVMEYVPLG 98
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L+ +L + + L F Q+ GM +L ++ IHR LAARNVL
Sbjct: 99 SLRDYL--------------PRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVL 144
Query: 142 IGENHCCKVADFGFARDLMTSSVYER-KSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
+ + K+ DFG A+ + Y R + +G P+ W APE L + F SD+WSFGV
Sbjct: 145 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVT 204
Query: 201 IWEIVT 206
++E++T
Sbjct: 205 LYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 114 bits (284), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 102/186 (54%), Gaps = 18/186 (9%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEK--EPFFVIMEYVPYG 81
+VAVK LKE G + R +E+ +++TL H ++V+ GCC ++ + ++MEYVP G
Sbjct: 39 MVAVKALKEGCGPQLRSGWQREIEILRTLY-HEHIVKYKGCCEDQGEKSVQLVMEYVPLG 97
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L+ +L + + L F Q+ GM +L ++ IHR LAARNVL
Sbjct: 98 SLRDYL--------------PRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVL 143
Query: 142 IGENHCCKVADFGFARDLMTSSVYER-KSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
+ + K+ DFG A+ + Y R + +G P+ W APE L + F SD+WSFGV
Sbjct: 144 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVT 203
Query: 201 IWEIVT 206
++E++T
Sbjct: 204 LYELLT 209
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 32/209 (15%)
Query: 25 VAVKTLKENAGE--RERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGK 82
VAVK + + E + ++ +++ + + HPN++ L G C ++ ++ME+ G
Sbjct: 33 VAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGP 92
Query: 83 LQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGI---IHRDLAARN 139
L L R + L ++ Q+ARGM +L I IHRDL + N
Sbjct: 93 LNRVLSGKR--------------IPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSN 138
Query: 140 VLIGE--------NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVK 191
+LI + N K+ DFG AR+ ++ K WMAPE + ++FS
Sbjct: 139 ILILQKVENGDLSNKILKITDFGLAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKG 194
Query: 192 SDIWSFGVLIWEIVTLGSTPYPGMAAAEV 220
SD+WS+GVL+WE++T G P+ G+ V
Sbjct: 195 SDVWSYGVLLWELLT-GEVPFRGIDGLAV 222
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 22/182 (12%)
Query: 29 TLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 88
+K+ E ER + EL + ++ HPN+V+L G C P ++MEY G L + L
Sbjct: 36 AIKQIESESERKAFIVELRQLSRVN-HPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLH 92
Query: 89 SSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSS---RGIIHRDLAARNVL-IGE 144
+ YY H S+C Q ++G+ +L S + +IHRDL N+L +
Sbjct: 93 GAEPLPYYTAAHA----------MSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAG 142
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A D+ T + S WMAPE + +S K D++S+G+++WE+
Sbjct: 143 GTVLKICDFGTACDIQTHMTNNKGSAA-----WMAPEVFEGSNYSEKCDVFSWGIILWEV 197
Query: 205 VT 206
+T
Sbjct: 198 IT 199
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 22/182 (12%)
Query: 29 TLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 88
+K+ E ER + EL + ++ HPN+V+L G C P ++MEY G L + L
Sbjct: 35 AIKQIESESERKAFIVELRQLSRVN-HPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLH 91
Query: 89 SSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSS---RGIIHRDLAARNVL-IGE 144
+ YY H S+C Q ++G+ +L S + +IHRDL N+L +
Sbjct: 92 GAEPLPYYTAAHA----------MSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAG 141
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
K+ DFG A D+ T + S WMAPE + +S K D++S+G+++WE+
Sbjct: 142 GTVLKICDFGTACDIQTHMTNNKGSAA-----WMAPEVFEGSNYSEKCDVFSWGIILWEV 196
Query: 205 VT 206
+T
Sbjct: 197 IT 198
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 32/202 (15%)
Query: 19 REGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYV 78
RE ++ +K L E +R L+E+ VM+ L+ HPNV++ +G + + I EY+
Sbjct: 32 RETGEVMVMKELIRFDEETQRT-FLKEVKVMRCLE-HPNVLKFIGVLYKDKRLNFITEYI 89
Query: 79 PYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAAR 138
G L+ ++S +Q ++ SF +A GM +L S IIHRDL +
Sbjct: 90 KGGTLRGIIKSMDSQYPWSQR------------VSFAKDIASGMAYLHSMNIIHRDLNSH 137
Query: 139 NVLIGENHCCKVADFGFARDLMTSSVYERKSEG----RLPIR-----------WMAPESL 183
N L+ EN VADFG AR ++ + EG + P R WMAPE +
Sbjct: 138 NCLVRENKNVVVADFGLARLMVDEKT---QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMI 194
Query: 184 YDNIFSVKSDIWSFGVLIWEIV 205
+ K D++SFG+++ EI+
Sbjct: 195 NGRSYDEKVDVFSFGIVLCEII 216
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 99/199 (49%), Gaps = 19/199 (9%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK + +R L L E+ +M+ H NVV + E +V+ME++ G L
Sbjct: 73 VAVKMMDLRKQQRREL-LFNEVVIMRDYQ-HFNVVEMYKSYLVGEELWVLMEFLQGGALT 130
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+ R L + + C V + + +L ++G+IHRD+ + ++L+
Sbjct: 131 DIVSQVR--------------LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTL 176
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K++DFGF + + V +RK P WMAPE + ++++ + DIWS G+++ E+
Sbjct: 177 DGRVKLSDFGFCAQI-SKDVPKRKXLVGTPY-WMAPEVISRSLYATEVDIWSLGIMVIEM 234
Query: 205 VTLGSTPYPGMAAAEVMKK 223
V G PY + + MK+
Sbjct: 235 VD-GEPPYFSDSPVQAMKR 252
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 19/195 (9%)
Query: 25 VAVKTLKENAGERERLDLLQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
VAVK L A ++L + E+ V++ H N++ +G T K ++ ++ L
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYST-KPQLAIVTQWCEGSSL 106
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
Y+++H + L Q ARGM +L ++ IIHRDL + N+ +
Sbjct: 107 ------------YHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLH 154
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY---DNIFSVKSDIWSFGVL 200
E++ K+ DFG A + S + + I WMAPE + N +S +SD+++FG++
Sbjct: 155 EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIV 214
Query: 201 IWEIVTLGSTPYPGM 215
++E++T G PY +
Sbjct: 215 LYELMT-GQLPYSNI 228
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K + + +LL+E+ M HPN+V K+ +++M+ + G +
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCH-HPNIVSYYTSFVVKDELWLVMKLLSGGSVL 96
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++ A+ + KS L + + +V G+++L G IHRD+ A N+L+GE
Sbjct: 97 DIIKHIVAKGEH-----KSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGE 151
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIR---WMAPESLYD-NIFSVKSDIWSFGVL 200
+ ++ADFG + L T R + + WMAPE + + K+DIWSFG+
Sbjct: 152 DGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGIT 211
Query: 201 IWEIVTLGSTPY 212
E+ T G+ PY
Sbjct: 212 AIELAT-GAAPY 222
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 23/197 (11%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
+ +E + A K + E E E D + E+ ++ T D HP +V+LLG ++++E
Sbjct: 39 KNKETGALAAAKVI-ETKSEEELEDYIVEIEILATCD-HPYIVKLLGAYYHDGKLWIMIE 96
Query: 77 YVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLA 136
+ P G + + M LT + C Q+ + FL S+ IIHRDL
Sbjct: 97 FCPGGAVDAI------------MLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLK 144
Query: 137 ARNVLIGENHCCKVADFGF-ARDLMTSSVYERKSEGRLPIRWMAP-----ESLYDNIFSV 190
A NVL+ ++ADFG A++L T + +R S P WMAP E++ D +
Sbjct: 145 AGNVLMTLEGDIRLADFGVSAKNLKT--LQKRDSFIGTPY-WMAPEVVMCETMKDTPYDY 201
Query: 191 KSDIWSFGVLIWEIVTL 207
K+DIWS G+ + E+ +
Sbjct: 202 KADIWSLGITLIEMAQI 218
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K + + +LL+E+ M HPN+V K+ +++M+ + G +
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCH-HPNIVSYYTSFVVKDELWLVMKLLSGGSVL 101
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++ A+ + KS L + + +V G+++L G IHRD+ A N+L+GE
Sbjct: 102 DIIKHIVAKGEH-----KSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGE 156
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIR---WMAPESLYD-NIFSVKSDIWSFGVL 200
+ ++ADFG + L T R + + WMAPE + + K+DIWSFG+
Sbjct: 157 DGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGIT 216
Query: 201 IWEIVTLGSTPY 212
E+ T G+ PY
Sbjct: 217 AIELAT-GAAPY 227
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 23/197 (11%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
+ +E + A K + E E E D + E+ ++ T D HP +V+LLG ++++E
Sbjct: 31 KNKETGALAAAKVI-ETKSEEELEDYIVEIEILATCD-HPYIVKLLGAYYHDGKLWIMIE 88
Query: 77 YVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLA 136
+ P G + + M LT + C Q+ + FL S+ IIHRDL
Sbjct: 89 FCPGGAVDAI------------MLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLK 136
Query: 137 ARNVLIGENHCCKVADFGF-ARDLMTSSVYERKSEGRLPIRWMAP-----ESLYDNIFSV 190
A NVL+ ++ADFG A++L T + +R S P WMAP E++ D +
Sbjct: 137 AGNVLMTLEGDIRLADFGVSAKNLKT--LQKRDSFIGTP-YWMAPEVVMCETMKDTPYDY 193
Query: 191 KSDIWSFGVLIWEIVTL 207
K+DIWS G+ + E+ +
Sbjct: 194 KADIWSLGITLIEMAQI 210
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 19/195 (9%)
Query: 25 VAVKTLKENAGERERLDLLQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
VAVK L A ++L + E+ V++ H N++ +G T + ++ ++ L
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYSTAPQ-LAIVTQWCEGSSL 106
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
Y+++H + L Q ARGM +L ++ IIHRDL + N+ +
Sbjct: 107 ------------YHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLH 154
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY---DNIFSVKSDIWSFGVL 200
E++ K+ DFG A + S + + I WMAPE + N +S +SD+++FG++
Sbjct: 155 EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIV 214
Query: 201 IWEIVTLGSTPYPGM 215
++E++T G PY +
Sbjct: 215 LYELMT-GQLPYSNI 228
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 96/195 (49%), Gaps = 19/195 (9%)
Query: 25 VAVKTLKENAGERERLDLLQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
VAVK L A ++L + E+ V++ H N++ +G T K ++ ++ L
Sbjct: 37 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYST-KPQLAIVTQWCEGSSL 94
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
Y+++H + L Q ARGM +L ++ IIHRDL + N+ +
Sbjct: 95 ------------YHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLH 142
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY---DNIFSVKSDIWSFGVL 200
E++ K+ DFG A S + + I WMAPE + N +S +SD+++FG++
Sbjct: 143 EDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIV 202
Query: 201 IWEIVTLGSTPYPGM 215
++E++T G PY +
Sbjct: 203 LYELMT-GQLPYSNI 216
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 104/202 (51%), Gaps = 23/202 (11%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDL-LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIM 75
R ++ IVA+K E+ ++ + ++E+ ++K L H N+V LL C +K+ ++++
Sbjct: 45 RNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-RHENLVNLLEVCKKKKRWYLVF 103
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E+V + L +++ N L + + + +Q+ G+ F S IIHRD+
Sbjct: 104 EFVDHTIL-------------DDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDI 150
Query: 136 AARNVLIGENHCCKVADFGFARDLMT-SSVYERKSEGRLPIRWM-APESLYDNI-FSVKS 192
N+L+ ++ K+ DFGFAR L VY+ + + RW APE L ++ +
Sbjct: 151 KPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE----VATRWYRAPELLVGDVKYGKAV 206
Query: 193 DIWSFGVLIWEIVTLGSTPYPG 214
D+W+ G L+ E+ +G +PG
Sbjct: 207 DVWAIGCLVTEMF-MGEPLFPG 227
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 6 VEVRKHPMSPERGREGPCIVAVKTLKENAGERERLD-LLQELTVMKTLDPHPNVVRLLGC 64
V++ +H ++ GRE VA+K + + L L +E+ +MK L+ HPN+V+L
Sbjct: 31 VKLARHILT---GRE----VAIKIIDKTQLNPTSLQKLFREVRIMKILN-HPNIVKLFEV 82
Query: 65 CTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQF 124
++ ++IMEY G++ +L + HG+ + ++ S Q+ +Q+
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVA----------HGR---MKEKEARSKFRQIVSAVQY 129
Query: 125 LSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY 184
+ I+HRDL A N+L+ + K+ADFGF+ + G+L AP
Sbjct: 130 CHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG--------GKLDAFCGAPPYAA 181
Query: 185 DNIFSVKS------DIWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
+F K D+WS GV+++ +V+ GS P+ G E+ ++
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGQNLKELRER 225
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 19/199 (9%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VAVK + +R L L E+ +M+ H NVV + + +V+ME++ G L
Sbjct: 73 VAVKKMDLRKQQRREL-LFNEVVIMRDYH-HDNVVDMYSSYLVGDELWVVMEFLEGGALT 130
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+ +R + + + C V R + +L ++G+IHRD+ + ++L+
Sbjct: 131 DIVTHTR--------------MNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTS 176
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K++DFGF + + V +RK P WMAPE + + + DIWS G+++ E+
Sbjct: 177 DGRIKLSDFGFCAQV-SKEVPKRKXLVGTPY-WMAPEVISRLPYGTEVDIWSLGIMVIEM 234
Query: 205 VTLGSTPYPGMAAAEVMKK 223
+ G PY + M++
Sbjct: 235 ID-GEPPYFNEPPLQAMRR 252
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 102/197 (51%), Gaps = 20/197 (10%)
Query: 17 RGREGPCIVAVKTLKENAGER-ERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIM 75
R R A+K LK+ R ++++ + +M ++ HP ++R+ G + + F+IM
Sbjct: 26 RSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
+Y+ G+L S LR S QR+ N + + +V +++L S+ II+RDL
Sbjct: 86 DYIEGGELFSLLRKS--QRFPNPV-----------AKFYAAEVCLALEYLHSKDIIYRDL 132
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+L+ +N K+ DFGFA+ + + + ++APE + ++ D W
Sbjct: 133 KPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPD-----YIAPEVVSTKPYNKSIDWW 187
Query: 196 SFGVLIWEIVTLGSTPY 212
SFG+LI+E++ G TP+
Sbjct: 188 SFGILIYEMLA-GYTPF 203
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 12/176 (6%)
Query: 37 RERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYY 96
+ R D ++E+ ++K L+ HPNV++ E +++E G L ++ + Q+
Sbjct: 74 KARADCIKEIDLLKQLN-HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQK-- 130
Query: 97 NNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFA 156
+ R + + Q+ ++ + SR ++HRD+ NV I K+ D G
Sbjct: 131 -------RLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLG 183
Query: 157 RDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
R +S S P +M+PE +++N ++ KSDIWS G L++E+ L S Y
Sbjct: 184 R-FFSSKTTAAHSLVGTPY-YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY 237
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 27/199 (13%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEP------FFVIMEY 77
+ A+K + E E ++ QE+ ++K H N+ G +K P +++ME+
Sbjct: 51 LAAIKVMDVTGDEEE--EIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 108
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
G + ++++ K N+L + C ++ RG+ L +IHRD+
Sbjct: 109 CGAGSVTDLIKNT-----------KGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKG 157
Query: 138 RNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY-----DNIFSVKS 192
+NVL+ EN K+ DFG + L +V R + P WMAPE + D + KS
Sbjct: 158 QNVLLTENAEVKLVDFGVSAQL-DRTVGRRNTFIGTPY-WMAPEVIACDENPDATYDFKS 215
Query: 193 DIWSFGVLIWEIVTLGSTP 211
D+WS G+ E+ G+ P
Sbjct: 216 DLWSLGITAIEMAE-GAPP 233
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 6 VEVRKHPMSPERGREGPCIVAVKTLKENAGERERLD-LLQELTVMKTLDPHPNVVRLLGC 64
V++ +H ++ GRE VA+K + + L L +E+ +MK L+ HPN+V+L
Sbjct: 28 VKLARHILT---GRE----VAIKIIDKTQLNPTSLQKLFREVRIMKILN-HPNIVKLFEV 79
Query: 65 CTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQF 124
++ ++IMEY G++ +L + HG+ + ++ S Q+ +Q+
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVA----------HGR---MKEKEARSKFRQIVSAVQY 126
Query: 125 LSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY 184
+ I+HRDL A N+L+ + K+ADFGF+ + G+L +P
Sbjct: 127 CHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG--------GKLDTFCGSPPYAA 178
Query: 185 DNIFSVKS------DIWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
+F K D+WS GV+++ +V+ GS P+ G E+ ++
Sbjct: 179 PELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGQNLKELRER 222
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 55 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 114
HP++V L+G C E+ +I +Y+ G L+ L Y +++ S S R
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHL-------YGSDLPTMSMSWEQR--LEI 144
Query: 115 CYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLP 174
C ARG+ +L +R IIHRD+ + N+L+ EN K+ DFG ++ +
Sbjct: 145 CIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 175 IRWMAPESLYDNIFSVKSDIWSFGVLIWEIV 205
+ ++ PE + KSD++SFGV+++E++
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 55 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 114
HP++V L+G C E+ +I +Y+ G L+ L Y +++ S S R
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHL-------YGSDLPTMSMSWEQR--LEI 144
Query: 115 CYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLP 174
C ARG+ +L +R IIHRD+ + N+L+ EN K+ DFG ++ +
Sbjct: 145 CIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 175 IRWMAPESLYDNIFSVKSDIWSFGVLIWEIV 205
+ ++ PE + KSD++SFGV+++E++
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 19/188 (10%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA++ + ++ L ++ E+ VM+ + +PN+V L + +V+MEY+ G L
Sbjct: 48 VAIRQMNLQQQPKKEL-IINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+ + + + + C + + ++FL S +IHRD+ + N+L+G
Sbjct: 106 DVVTET--------------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 151
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFGF + ++SE WMAPE + + K DIWS G++ E+
Sbjct: 152 DGSVKLTDFGFCAQITPEQ--SKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM 209
Query: 205 VTLGSTPY 212
+ G PY
Sbjct: 210 IE-GEPPY 216
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 17/182 (9%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
+VA+K + E E D+ QE+TV+ D P + R G + ++IMEY+ G
Sbjct: 46 VVAIKIIDLEEAEDEIEDIQQEITVLSQCD-SPYITRYFGSYLKSTKLWIIMEYLGGGSA 104
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
L+ + Y + + ++ +G+ +L S IHRD+ A NVL+
Sbjct: 105 LDLLKPGPLEETY--------------IATILREILKGLDYLHSERKIHRDIKAANVLLS 150
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWE 203
E K+ADFG A L + + G P WMAPE + + + K+DIWS G+ E
Sbjct: 151 EQGDVKLADFGVAGQLTDTQIKRNXFVGT-PF-WMAPEVIKQSAYDFKADIWSLGITAIE 208
Query: 204 IV 205
+
Sbjct: 209 LA 210
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 12/177 (6%)
Query: 46 LTVMKTLDPHP-------NVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
+ ++K +DP P N V +L T + M Y+ L + Y +
Sbjct: 63 VKILKVVDPTPEQFQAFRNEVAVLRK-TRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKH 121
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARD 158
+H + L Q A+GM +L ++ IIHRD+ + N+ + E K+ DFG A
Sbjct: 122 LHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATV 181
Query: 159 LMTSSVYERKSEGRLPIRWMAPESLY---DNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
S ++ + + WMAPE + +N FS +SD++S+G++++E++T G PY
Sbjct: 182 KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT-GELPY 237
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 19/188 (10%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA++ + ++ L ++ E+ VM+ + +PN+V L + +V+MEY+ G L
Sbjct: 48 VAIRQMNLQQQPKKEL-IINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+ + + + + C + + ++FL S +IHRD+ + N+L+G
Sbjct: 106 DVVTET--------------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 151
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFGF + T +R + P WMAPE + + K DIWS G++ E+
Sbjct: 152 DGSVKLTDFGFCAQI-TPEQSKRSTMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEM 209
Query: 205 VTLGSTPY 212
+ G PY
Sbjct: 210 IE-GEPPY 216
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
+VAVK + +R L L E+ +M+ H NVV + + +V+ME++ G L
Sbjct: 101 LVAVKKMDLRKQQRREL-LFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGAL 158
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
+ +R + + + C V + + L ++G+IHRD+ + ++L+
Sbjct: 159 TDIVTHTR--------------MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 204
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWE 203
+ K++DFGF + + V RK P WMAPE + + + DIWS G+++ E
Sbjct: 205 HDGRVKLSDFGFCAQV-SKEVPRRKXLVGTPY-WMAPELISRLPYGPEVDIWSLGIMVIE 262
Query: 204 IVTLGSTPYPGMAAAEVMK 222
+V G PY + MK
Sbjct: 263 MVD-GEPPYFNEPPLKAMK 280
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
+VAVK + +R L L E+ +M+ H NVV + + +V+ME++ G L
Sbjct: 51 LVAVKKMDLRKQQRREL-LFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGAL 108
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
+ +R + + + C V + + L ++G+IHRD+ + ++L+
Sbjct: 109 TDIVTHTR--------------MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 154
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWE 203
+ K++DFGF + + V RK P WMAPE + + + DIWS G+++ E
Sbjct: 155 HDGRVKLSDFGFCAQV-SKEVPRRKXLVGTPY-WMAPELISRLPYGPEVDIWSLGIMVIE 212
Query: 204 IVTLGSTPYPGMAAAEVMK 222
+V G PY + MK
Sbjct: 213 MVD-GEPPYFNEPPLKAMK 230
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
+VAVK + +R L L E+ +M+ H NVV + + +V+ME++ G L
Sbjct: 58 LVAVKKMDLRKQQRREL-LFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGAL 115
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
+ +R + + + C V + + L ++G+IHRD+ + ++L+
Sbjct: 116 TDIVTHTR--------------MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 161
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWE 203
+ K++DFGF + + V RK P WMAPE + + + DIWS G+++ E
Sbjct: 162 HDGRVKLSDFGFCAQV-SKEVPRRKXLVGTPY-WMAPELISRLPYGPEVDIWSLGIMVIE 219
Query: 204 IVTLGSTPYPGMAAAEVMK 222
+V G PY + MK
Sbjct: 220 MVD-GEPPYFNEPPLKAMK 237
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
+VAVK + +R L L E+ +M+ H NVV + + +V+ME++ G L
Sbjct: 56 LVAVKKMDLRKQQRREL-LFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGAL 113
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
+ +R + + + C V + + L ++G+IHRD+ + ++L+
Sbjct: 114 TDIVTHTR--------------MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 159
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWE 203
+ K++DFGF + + V RK P WMAPE + + + DIWS G+++ E
Sbjct: 160 HDGRVKLSDFGFCAQV-SKEVPRRKXLVGTPY-WMAPELISRLPYGPEVDIWSLGIMVIE 217
Query: 204 IVTLGSTPYPGMAAAEVMK 222
+V G PY + MK
Sbjct: 218 MVD-GEPPYFNEPPLKAMK 235
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
+VAVK + +R L L E+ +M+ H NVV + + +V+ME++ G L
Sbjct: 178 LVAVKKMDLRKQQRREL-LFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGAL 235
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
+ +R + + + C V + + L ++G+IHRD+ + ++L+
Sbjct: 236 TDIVTHTR--------------MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 281
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWE 203
+ K++DFGF + + V RK P WMAPE + + + DIWS G+++ E
Sbjct: 282 HDGRVKLSDFGFCAQV-SKEVPRRKXLVGTPY-WMAPELISRLPYGPEVDIWSLGIMVIE 339
Query: 204 IVTLGSTPYPGMAAAEVMK 222
+V G PY + MK
Sbjct: 340 MVD-GEPPYFNEPPLKAMK 357
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
+VAVK + +R L L E+ +M+ H NVV + + +V+ME++ G L
Sbjct: 47 LVAVKKMDLRKQQRREL-LFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGAL 104
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
+ +R + + + C V + + L ++G+IHRD+ + ++L+
Sbjct: 105 TDIVTHTR--------------MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 150
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWE 203
+ K++DFGF + + V RK P WMAPE + + + DIWS G+++ E
Sbjct: 151 HDGRVKLSDFGFCAQV-SKEVPRRKXLVGTPY-WMAPELISRLPYGPEVDIWSLGIMVIE 208
Query: 204 IVTLGSTPYPGMAAAEVMK 222
+V G PY + MK
Sbjct: 209 MVD-GEPPYFNEPPLKAMK 226
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 92/198 (46%), Gaps = 18/198 (9%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
+VA+K + E E D+ QE+TV+ D P V + G + ++IMEY+ G
Sbjct: 49 VVAIKIIDLEEAEDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKDTKLWIIMEYLGGGSA 107
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
L + L + + ++ +G+ +L S IHRD+ A NVL+
Sbjct: 108 LDLL--------------EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS 153
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWE 203
E+ K+ADFG A L + + G P WMAPE + + + K+DIWS G+ E
Sbjct: 154 EHGEVKLADFGVAGQLTDTQIKRNXFVGT-PF-WMAPEVIKQSAYDSKADIWSLGITAIE 211
Query: 204 IVTLGSTPYPGMAAAEVM 221
+ G P+ + +V+
Sbjct: 212 LAR-GEPPHSELHPMKVL 228
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 18/198 (9%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
+VA+K + E E D+ QE+TV+ D P V + G + ++IMEY+ G
Sbjct: 34 VVAIKIIDLEEAEDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKDTKLWIIMEYLGGGSA 92
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
L + L + + ++ +G+ +L S IHRD+ A NVL+
Sbjct: 93 LDLL--------------EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS 138
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWE 203
E+ K+ADFG A L + + +R + P WMAPE + + + K+DIWS G+ E
Sbjct: 139 EHGEVKLADFGVAGQLTDTQI-KRNTFVGTPF-WMAPEVIKQSAYDSKADIWSLGITAIE 196
Query: 204 IVTLGSTPYPGMAAAEVM 221
+ G P+ + +V+
Sbjct: 197 LAR-GEPPHSELHPMKVL 213
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 112/220 (50%), Gaps = 27/220 (12%)
Query: 6 VEVRKHPMSPERGREGPCIVAVKTLKENAGERERLD-LLQELTVMKTLDPHPNVVRLLGC 64
V++ +H ++ GRE VAVK + + L L +E+ +MK L+ HPN+V+L
Sbjct: 31 VKLARHVLT---GRE----VAVKIIDKTQLNPTSLQKLFREVRIMKILN-HPNIVKLFEV 82
Query: 65 CTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQF 124
++ +++MEY G++ +L + HG+ + ++ + Q+ +Q+
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVA----------HGR---MKEKEARAKFRQIVSAVQY 129
Query: 125 LSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY 184
+ I+HRDL A N+L+ + K+ADFGF+ + + + G P + APE
Sbjct: 130 CHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC-GSPP--YAAPELFQ 186
Query: 185 DNIFS-VKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
+ + D+WS GV+++ +V+ GS P+ G E+ ++
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVS-GSLPFDGQNLKELRER 225
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 18/198 (9%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
+VA+K + E E D+ QE+TV+ D P V + G + ++IMEY+ G
Sbjct: 54 VVAIKIIDLEEAEDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKDTKLWIIMEYLGGGSA 112
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
L + L + + ++ +G+ +L S IHRD+ A NVL+
Sbjct: 113 LDLL--------------EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS 158
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWE 203
E+ K+ADFG A L T + +R + P WMAPE + + + K+DIWS G+ E
Sbjct: 159 EHGEVKLADFGVAGQL-TDTQIKRNTFVGTPF-WMAPEVIKQSAYDSKADIWSLGITAIE 216
Query: 204 IVTLGSTPYPGMAAAEVM 221
+ G P+ + +V+
Sbjct: 217 LAR-GEPPHSELHPMKVL 233
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 102/201 (50%), Gaps = 20/201 (9%)
Query: 25 VAVKTLKENAGERERLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
VAVK + + L L +E+ +MK L+ HPN+V+L ++ +++MEY G++
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIMKVLN-HPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
+L + HG+ + ++ + Q+ +Q+ + I+HRDL A N+L+
Sbjct: 101 FDYLVA----------HGR---MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFS-VKSDIWSFGVLIW 202
+ K+ADFGF+ + + + G P + APE + + D+WS GV+++
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDTFC-GSPP--YAAPELFQGKKYDGPEVDVWSLGVILY 204
Query: 203 EIVTLGSTPYPGMAAAEVMKK 223
+V+ GS P+ G E+ ++
Sbjct: 205 TLVS-GSLPFDGQNLKELRER 224
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 90/188 (47%), Gaps = 19/188 (10%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA++ + ++ L ++ E+ VM+ + +PN+V L + +V+MEY+ G L
Sbjct: 49 VAIRQMNLQQQPKKEL-IINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 106
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+ + + + + C + + ++FL S +IHRD+ + N+L+G
Sbjct: 107 DVVTET--------------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 152
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFGF + T +R P WMAPE + + K DIWS G++ E+
Sbjct: 153 DGSVKLTDFGFCAQI-TPEQSKRSXMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEM 210
Query: 205 VTLGSTPY 212
+ G PY
Sbjct: 211 IE-GEPPY 217
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 90/188 (47%), Gaps = 19/188 (10%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA++ + ++ L ++ E+ VM+ + +PN+V L + +V+MEY+ G L
Sbjct: 48 VAIRQMNLQQQPKKEL-IINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+ + + + + C + + ++FL S +IHRD+ + N+L+G
Sbjct: 106 DVVTET--------------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 151
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFGF + T +R P WMAPE + + K DIWS G++ E+
Sbjct: 152 DGSVKLTDFGFCAQI-TPEQSKRSXMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEM 209
Query: 205 VTLGSTPY 212
+ G PY
Sbjct: 210 IE-GEPPY 216
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 92/198 (46%), Gaps = 18/198 (9%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
+VA+K + E E D+ QE+TV+ D P V + G + ++IMEY+ G
Sbjct: 34 VVAIKIIDLEEAEDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKDTKLWIIMEYLGGGSA 92
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
L + L + + ++ +G+ +L S IHRD+ A NVL+
Sbjct: 93 LDLL--------------EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS 138
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWE 203
E+ K+ADFG A L + + G P WMAPE + + + K+DIWS G+ E
Sbjct: 139 EHGEVKLADFGVAGQLTDTQIKRNXFVGT-PF-WMAPEVIKQSAYDSKADIWSLGITAIE 196
Query: 204 IVTLGSTPYPGMAAAEVM 221
+ G P+ + +V+
Sbjct: 197 LAR-GEPPHSELHPMKVL 213
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 102/201 (50%), Gaps = 20/201 (9%)
Query: 25 VAVKTLKENAGERERLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
VAVK + + L L +E+ +MK L+ HPN+V+L ++ +++MEY G++
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIMKVLN-HPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
+L + HG+ + ++ + Q+ +Q+ + I+HRDL A N+L+
Sbjct: 101 FDYLVA----------HGR---MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFS-VKSDIWSFGVLIW 202
+ K+ADFGF+ + + + G P + APE + + D+WS GV+++
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDTFC-GSPP--YAAPELFQGKKYDGPEVDVWSLGVILY 204
Query: 203 EIVTLGSTPYPGMAAAEVMKK 223
+V+ GS P+ G E+ ++
Sbjct: 205 TLVS-GSLPFDGQNLKELRER 224
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 102/201 (50%), Gaps = 20/201 (9%)
Query: 25 VAVKTLKENAGERERLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
VAVK + + L L +E+ +MK L+ HPN+V+L ++ +++MEY G++
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIMKVLN-HPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
+L + HG+ + ++ + Q+ +Q+ + I+HRDL A N+L+
Sbjct: 101 FDYLVA----------HGR---MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFS-VKSDIWSFGVLIW 202
+ K+ADFGF+ + + + G P + APE + + D+WS GV+++
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDAFC-GAPP--YAAPELFQGKKYDGPEVDVWSLGVILY 204
Query: 203 EIVTLGSTPYPGMAAAEVMKK 223
+V+ GS P+ G E+ ++
Sbjct: 205 TLVS-GSLPFDGQNLKELRER 224
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 19/194 (9%)
Query: 19 REGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYV 78
+E IVA+K + E + ++++E+++M+ D P+VV+ G + +++MEY
Sbjct: 51 KETGQIVAIKQV---PVESDLQEIIKEISIMQQCD-SPHVVKYYGSYFKNTDLWIVMEYC 106
Query: 79 PYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAAR 138
G + +R ++ +LT ++ + +G+++L IHRD+ A
Sbjct: 107 GAGSVSDIIRL------------RNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAG 154
Query: 139 NVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFG 198
N+L+ K+ADFG A L T + +R P WMAPE + + ++ +DIWS G
Sbjct: 155 NILLNTEGHAKLADFGVAGQL-TDXMAKRNXVIGTPF-WMAPEVIQEIGYNCVADIWSLG 212
Query: 199 VLIWEIVTLGSTPY 212
+ E+ G PY
Sbjct: 213 ITAIEMAE-GKPPY 225
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 95/183 (51%), Gaps = 19/183 (10%)
Query: 42 LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHG 101
L +E+ +MK L+ HPN+V+L ++ +++MEY G++ +L + HG
Sbjct: 60 LFREVRIMKVLN-HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA----------HG 108
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
+ + ++ + Q+ +Q+ + I+HRDL A N+L+ + K+ADFGF+ +
Sbjct: 109 R---MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF 165
Query: 162 SSVYERKSEGRLPIRWMAPESLYDNIFS-VKSDIWSFGVLIWEIVTLGSTPYPGMAAAEV 220
+ + G P + APE + + D+WS GV+++ +V+ GS P+ G E+
Sbjct: 166 GNKLDEFC-GSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGQNLKEL 221
Query: 221 MKK 223
++
Sbjct: 222 RER 224
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 16/167 (9%)
Query: 55 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 114
HP + + KE F +MEY+ G L ++S + T +
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-------------HKFDLSRATFY 124
Query: 115 CYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLP 174
++ G+QFL S+GI++RDL N+L+ ++ K+ADFG ++ M + +E
Sbjct: 125 AAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA--KTNEFCGT 182
Query: 175 IRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVM 221
++APE L ++ D WSFGVL++E++ +G +P+ G E+
Sbjct: 183 PDYIAPEILLGQKYNHSVDWWSFGVLLYEML-IGQSPFHGQDEEELF 228
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 104/200 (52%), Gaps = 20/200 (10%)
Query: 24 IVAVKTLKENAGE-RERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGK 82
+ A+K LK+ + R+R+ E ++ ++ HP VV+L + ++I++++ G
Sbjct: 58 LYAMKVLKKATLKVRDRVRTKMERDILADVN-HPFVVKLHYAFQTEGKLYLILDFLRGGD 116
Query: 83 LQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI 142
L F R S+ + T D+ + ++A G+ L S GII+RDL N+L+
Sbjct: 117 L--FTRLSKEVMF-----------TEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILL 163
Query: 143 GENHCCKVADFGFARDLMTSSVYERKSEGRL-PIRWMAPESLYDNIFSVKSDIWSFGVLI 201
E K+ DFG +++ + +E+K+ + +MAPE + S +D WS+GVL+
Sbjct: 164 DEEGHIKLTDFGLSKEAID---HEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLM 220
Query: 202 WEIVTLGSTPYPGMAAAEVM 221
+E++T GS P+ G E M
Sbjct: 221 FEMLT-GSLPFQGKDRKETM 239
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 19/192 (9%)
Query: 25 VAVKTLKENAGERERLDLLQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
VAVK L A ++L + E+ V++ H N++ +G T K ++ ++ L
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYST-KPQLAIVTQWCEGSSL 90
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
Y+++H L Q A+GM +L ++ IIHRDL + N+ +
Sbjct: 91 ------------YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 138
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY---DNIFSVKSDIWSFGVL 200
E+ K+ DFG A + S + + I WMAPE + N +S +SD+++FG++
Sbjct: 139 EDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV 198
Query: 201 IWEIVTLGSTPY 212
++E++T G PY
Sbjct: 199 LYELMT-GQLPY 209
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 19/195 (9%)
Query: 25 VAVKTLKENAGERERLDLLQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
VAVK L A ++L + E+ V++ H N++ +G T K ++ ++ L
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYST-KPQLAIVTQWCEGSSL 118
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
Y+++H L Q A+GM +L ++ IIHRDL + N+ +
Sbjct: 119 ------------YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 166
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY---DNIFSVKSDIWSFGVL 200
E+ K+ DFG A + S + + I WMAPE + N +S +SD+++FG++
Sbjct: 167 EDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV 226
Query: 201 IWEIVTLGSTPYPGM 215
++E++T G PY +
Sbjct: 227 LYELMT-GQLPYSNI 240
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 95/183 (51%), Gaps = 19/183 (10%)
Query: 42 LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHG 101
L +E+ +MK L+ HPN+V+L ++ +++MEY G++ +L + HG
Sbjct: 60 LFREVRIMKVLN-HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA----------HG 108
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
+ + ++ + Q+ +Q+ + I+HRDL A N+L+ + K+ADFGF+ +
Sbjct: 109 R---MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF 165
Query: 162 SSVYERKSEGRLPIRWMAPESLYDNIFS-VKSDIWSFGVLIWEIVTLGSTPYPGMAAAEV 220
+ + G P + APE + + D+WS GV+++ +V+ GS P+ G E+
Sbjct: 166 GNKLDTFC-GSPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGQNLKEL 221
Query: 221 MKK 223
++
Sbjct: 222 RER 224
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 19/188 (10%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA++ + ++ L ++ E+ VM+ + +PN+V L + +V+MEY+ G L
Sbjct: 49 VAIRQMNLQQQPKKEL-IINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 106
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+ + + + + C + + ++FL S +IHR++ + N+L+G
Sbjct: 107 DVVTET--------------CMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGM 152
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFGF + T +R + P WMAPE + + K DIWS G++ E+
Sbjct: 153 DGSVKLTDFGFCAQI-TPEQSKRSTMVGTP-YWMAPEVVTRKAYGPKVDIWSLGIMAIEM 210
Query: 205 VTLGSTPY 212
+ G PY
Sbjct: 211 IE-GEPPY 217
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 19/195 (9%)
Query: 25 VAVKTLKENAGERERLDLLQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
VAVK L A ++L + E+ V++ H N++ +G T K ++ ++ L
Sbjct: 53 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYST-KPQLAIVTQWCEGSSL 110
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
Y+++H L Q A+GM +L ++ IIHRDL + N+ +
Sbjct: 111 ------------YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 158
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY---DNIFSVKSDIWSFGVL 200
E+ K+ DFG A + S + + I WMAPE + N +S +SD+++FG++
Sbjct: 159 EDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV 218
Query: 201 IWEIVTLGSTPYPGM 215
++E++T G PY +
Sbjct: 219 LYELMT-GQLPYSNI 232
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 18/198 (9%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
+VA+K + E E D+ QE+TV+ D V + G + ++IMEY+ G
Sbjct: 50 VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSS-YVTKYYGSYLKGSKLWIIMEYLGGGSA 108
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
LR+ + + + ++ +G+ +L S IHRD+ A NVL+
Sbjct: 109 LDLLRAGPFDEF--------------QIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS 154
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWE 203
E K+ADFG A L T + +R + P WMAPE + + + K+DIWS G+ E
Sbjct: 155 EQGDVKLADFGVAGQL-TDTQIKRNTFVGTPF-WMAPEVIQQSAYDSKADIWSLGITAIE 212
Query: 204 IVTLGSTPYPGMAAAEVM 221
+ G P M V+
Sbjct: 213 LAK-GEPPNSDMHPMRVL 229
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 16/167 (9%)
Query: 55 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 114
HP + + KE F +MEY+ G L ++S + T +
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-------------HKFDLSRATFY 123
Query: 115 CYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLP 174
++ G+QFL S+GI++RDL N+L+ ++ K+ADFG ++ M G
Sbjct: 124 AAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCG--T 181
Query: 175 IRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVM 221
++APE L ++ D WSFGVL++E++ +G +P+ G E+
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEML-IGQSPFHGQDEEELF 227
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R R+ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 32 RERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 90
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 91 LEYAPLGTVYRELQ-------------KLSRFDEQRTATYITELANALSYCHSKRVIHRD 137
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G N K+ADFG++ +S R++ + ++ PE + + K D+
Sbjct: 138 IKPENLLLGSNGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEKVDL 193
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E ++
Sbjct: 194 WSLGVLCYEFL-VGMPPFEAHTYQETYRR 221
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 25 VAVKTLKENAGERERLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
VAVK + + L L +E+ +MK L+ HPN+V+L ++ +++MEY G++
Sbjct: 35 VAVKIIDKTQLNSSSLQKLFREVRIMKVLN-HPNIVKLFEVIETEKTLYLVMEYASGGEV 93
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
+L + HG + ++ + Q+ +Q+ + I+HRDL A N+L+
Sbjct: 94 FDYLVA----------HG---WMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 140
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFS-VKSDIWSFGVLIW 202
+ K+ADFGF+ + + + G P + APE + + D+WS GV+++
Sbjct: 141 ADMNIKIADFGFSNEFTFGNKLDTFC-GSPP--YAAPELFQGKKYDGPEVDVWSLGVILY 197
Query: 203 EIVTLGSTPYPGMAAAEV 220
+V+ GS P+ G E+
Sbjct: 198 TLVS-GSLPFDGQNLKEL 214
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R R+ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 32 RERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 90
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 91 LEYAPLGTVYRELQ-------------KLSRFDEQRTATYITELANALSYCHSKRVIHRD 137
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G N K+ADFG++ +S R+ + ++ PE + + K D+
Sbjct: 138 IKPENLLLGSNGELKIADFGWSVHAPSS----RRDTLCGTLDYLPPEMIEGRMHDEKVDL 193
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E ++
Sbjct: 194 WSLGVLCYEFL-VGMPPFEAHTYQETYRR 221
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 28 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 86
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 87 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R++E + ++ PE + + K D+
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAPSS----RRTELCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 190 WSLGVLCYEFL-VGKPPFEANTYQETYKR 217
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 20/196 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
+ +E + A K + + E E D + E+ ++ + D HPN+V+LL + ++++E
Sbjct: 30 QNKETSVLAAAKVI-DTKSEEELEDYMVEIDILASCD-HPNIVKLLDAFYYENNLWILIE 87
Query: 77 YVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLA 136
+ G + + M LT + C Q + +L IIHRDL
Sbjct: 88 FCAGGAVDAV------------MLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 135
Query: 137 ARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY-----DNIFSVK 191
A N+L + K+ADFG + + + R S P WMAPE + D + K
Sbjct: 136 AGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPY-WMAPEVVMCETSKDRPYDYK 194
Query: 192 SDIWSFGVLIWEIVTL 207
+D+WS G+ + E+ +
Sbjct: 195 ADVWSLGITLIEMAEI 210
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 19/195 (9%)
Query: 25 VAVKTLKENAGERERLDLLQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
VAVK L A ++L + E+ V++ H N++ +G T K ++ ++ L
Sbjct: 35 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYST-KPQLAIVTQWCEGSSL 92
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
Y+++H L Q A+GM +L ++ IIHRDL + N+ +
Sbjct: 93 ------------YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 140
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY---DNIFSVKSDIWSFGVL 200
E+ K+ DFG A S + + I WMAPE + N +S +SD+++FG++
Sbjct: 141 EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV 200
Query: 201 IWEIVTLGSTPYPGM 215
++E++T G PY +
Sbjct: 201 LYELMT-GQLPYSNI 214
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 19/195 (9%)
Query: 25 VAVKTLKENAGERERLDLLQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
VAVK L A ++L + E+ V++ H N++ +G T K ++ ++ L
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYST-KPQLAIVTQWCEGSSL 95
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
Y+++H L Q A+GM +L ++ IIHRDL + N+ +
Sbjct: 96 ------------YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 143
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY---DNIFSVKSDIWSFGVL 200
E+ K+ DFG A S + + I WMAPE + N +S +SD+++FG++
Sbjct: 144 EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV 203
Query: 201 IWEIVTLGSTPYPGM 215
++E++T G PY +
Sbjct: 204 LYELMT-GQLPYSNI 217
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 19/192 (9%)
Query: 25 VAVKTLKENAGERERLDLLQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
VAVK L A ++L + E+ V++ H N++ +G T K ++ ++ L
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYST-KPQLAIVTQWCEGSSL 90
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
Y+++H L Q A+GM +L ++ IIHRDL + N+ +
Sbjct: 91 ------------YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 138
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY---DNIFSVKSDIWSFGVL 200
E+ K+ DFG A S + + I WMAPE + N +S +SD+++FG++
Sbjct: 139 EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV 198
Query: 201 IWEIVTLGSTPY 212
++E++T G PY
Sbjct: 199 LYELMT-GQLPY 209
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 19/192 (9%)
Query: 25 VAVKTLKENAGERERLDLLQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
VAVK L A ++L + E+ V++ H N++ +G T K ++ ++ L
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYST-KPQLAIVTQWCEGSSL 95
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
Y+++H L Q A+GM +L ++ IIHRDL + N+ +
Sbjct: 96 ------------YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 143
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY---DNIFSVKSDIWSFGVL 200
E+ K+ DFG A S + + I WMAPE + N +S +SD+++FG++
Sbjct: 144 EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV 203
Query: 201 IWEIVTLGSTPY 212
++E++T G PY
Sbjct: 204 LYELMT-GQLPY 214
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 19/195 (9%)
Query: 25 VAVKTLKENAGERERLDLLQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
VAVK L A ++L + E+ V++ H N++ +G T K ++ ++ L
Sbjct: 60 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYST-KPQLAIVTQWCEGSSL 117
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
Y+++H L Q A+GM +L ++ IIHRDL + N+ +
Sbjct: 118 ------------YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 165
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY---DNIFSVKSDIWSFGVL 200
E+ K+ DFG A S + + I WMAPE + N +S +SD+++FG++
Sbjct: 166 EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV 225
Query: 201 IWEIVTLGSTPYPGM 215
++E++T G PY +
Sbjct: 226 LYELMT-GQLPYSNI 239
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 19/195 (9%)
Query: 25 VAVKTLKENAGERERLDLLQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
VAVK L A ++L + E+ V++ H N++ +G T K ++ ++ L
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYST-KPQLAIVTQWCEGSSL 118
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
Y+++H L Q A+GM +L ++ IIHRDL + N+ +
Sbjct: 119 ------------YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 166
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY---DNIFSVKSDIWSFGVL 200
E+ K+ DFG A S + + I WMAPE + N +S +SD+++FG++
Sbjct: 167 EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV 226
Query: 201 IWEIVTLGSTPYPGM 215
++E++T G PY +
Sbjct: 227 LYELMT-GQLPYSNI 240
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 33 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 91
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G++ L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 92 LEYAPRGEVYKELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 138
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R+ + ++ PE + + K D+
Sbjct: 139 IKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLXGTLDYLPPEMIEGRMHDEKVDL 194
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 195 WSLGVLCYEFL-VGKPPFEANTYQETYKR 222
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 19/192 (9%)
Query: 25 VAVKTLKENAGERERLDLLQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
VAVK L A ++L + E+ V++ H N++ +G T + ++ ++ L
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYSTAPQ-LAIVTQWCEGSSL 90
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
Y+++H L Q A+GM +L ++ IIHRDL + N+ +
Sbjct: 91 ------------YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 138
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY---DNIFSVKSDIWSFGVL 200
E+ K+ DFG A S + + I WMAPE + N +S +SD+++FG++
Sbjct: 139 EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV 198
Query: 201 IWEIVTLGSTPY 212
++E++T G PY
Sbjct: 199 LYELMT-GQLPY 209
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 102/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 29 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 87
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 88 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 134
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R+++ + ++ PE + + K D+
Sbjct: 135 IKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLDYLPPEMIEGRMHDEKVDL 190
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 191 WSLGVLCYEFL-VGKPPFEANTYQETYKR 218
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 102/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 33 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 91
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 92 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 138
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R+++ + ++ PE + + K D+
Sbjct: 139 IKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLDYLPPEMIEGRMHDEKVDL 194
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 195 WSLGVLCYEFL-VGKPPFEANTYQETYKR 222
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 102/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 28 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 86
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 87 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R+++ + ++ PE + + K D+
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 190 WSLGVLCYEFL-VGKPPFEANTYQETYKR 217
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 102/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 28 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 86
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 87 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R+++ + ++ PE + + K D+
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 190 WSLGVLCYEFL-VGKPPFEANTYQETYKR 217
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 105/206 (50%), Gaps = 20/206 (9%)
Query: 18 GREGPCIVAVKTLKENAGE-RERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
G + + A+K LK+ + R+R+ E ++ ++ HP +V+L + ++I++
Sbjct: 49 GSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN-HPFIVKLHYAFQTEGKLYLILD 107
Query: 77 YVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLA 136
++ G L F R S+ + T D+ + ++A + L S GII+RDL
Sbjct: 108 FLRGGDL--FTRLSKEVMF-----------TEEDVKFYLAELALALDHLHSLGIIYRDLK 154
Query: 137 ARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRL-PIRWMAPESLYDNIFSVKSDIW 195
N+L+ E K+ DFG +++ S +E+K+ + +MAPE + + +D W
Sbjct: 155 PENILLDEEGHIKLTDFGLSKE---SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWW 211
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
SFGVL++E++T G+ P+ G E M
Sbjct: 212 SFGVLMFEMLT-GTLPFQGKDRKETM 236
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 105/206 (50%), Gaps = 20/206 (9%)
Query: 18 GREGPCIVAVKTLKENAGE-RERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
G + + A+K LK+ + R+R+ E ++ ++ HP +V+L + ++I++
Sbjct: 48 GSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN-HPFIVKLHYAFQTEGKLYLILD 106
Query: 77 YVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLA 136
++ G L F R S+ + T D+ + ++A + L S GII+RDL
Sbjct: 107 FLRGGDL--FTRLSKEVMF-----------TEEDVKFYLAELALALDHLHSLGIIYRDLK 153
Query: 137 ARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRL-PIRWMAPESLYDNIFSVKSDIW 195
N+L+ E K+ DFG +++ S +E+K+ + +MAPE + + +D W
Sbjct: 154 PENILLDEEGHIKLTDFGLSKE---SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWW 210
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
SFGVL++E++T G+ P+ G E M
Sbjct: 211 SFGVLMFEMLT-GTLPFQGKDRKETM 235
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 104/206 (50%), Gaps = 20/206 (9%)
Query: 18 GREGPCIVAVKTLKENAGE-RERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
G + + A+K LK+ + R+R+ E ++ ++ HP +V+L + ++I++
Sbjct: 48 GSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN-HPFIVKLHYAFQTEGKLYLILD 106
Query: 77 YVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLA 136
++ G L F R S K T D+ + ++A + L S GII+RDL
Sbjct: 107 FLRGGDL--FTRLS-----------KEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLK 153
Query: 137 ARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRL-PIRWMAPESLYDNIFSVKSDIW 195
N+L+ E K+ DFG +++ S +E+K+ + +MAPE + + +D W
Sbjct: 154 PENILLDEEGHIKLTDFGLSKE---SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWW 210
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
SFGVL++E++T G+ P+ G E M
Sbjct: 211 SFGVLMFEMLT-GTLPFQGKDRKETM 235
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 105/209 (50%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L ++ E+E ++ L +E+ + L HPN++R+ +++ +++
Sbjct: 35 REKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNILRMYNYFHDRKRIYLM 93
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+E+ P G+L L+ HG+ + S +F ++A + + R +IHRD
Sbjct: 94 LEFAPRGELYKELQK----------HGRFDEQRS---ATFMEELADALHYCHERKVIHRD 140
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ + S+ R G L ++ PE + K D+
Sbjct: 141 IKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTL--DYLPPEMIEGKTHDEKVDL 196
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
W GVL +E + +G P+ + E ++
Sbjct: 197 WCAGVLCYEFL-VGMPPFDSPSHTETHRR 224
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 105/209 (50%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L ++ E+E ++ L +E+ + L HPN++R+ +++ +++
Sbjct: 34 REKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNILRMYNYFHDRKRIYLM 92
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+E+ P G+L L+ HG+ + S +F ++A + + R +IHRD
Sbjct: 93 LEFAPRGELYKELQK----------HGRFDEQRS---ATFMEELADALHYCHERKVIHRD 139
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ + S+ R G L ++ PE + K D+
Sbjct: 140 IKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTL--DYLPPEMIEGKTHDEKVDL 195
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
W GVL +E + +G P+ + E ++
Sbjct: 196 WCAGVLCYEFL-VGMPPFDSPSHTETHRR 223
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 29 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 87
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 88 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 134
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R++ + ++ PE + + K D+
Sbjct: 135 IKPENLLLGSAGELKIADFGWSCHAPSS----RRTTLSGTLDYLPPEMIEGRMHDEKVDL 190
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 191 WSLGVLCYEFL-VGKPPFEANTYQETYKR 218
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 102/201 (50%), Gaps = 18/201 (8%)
Query: 27 VKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF 86
+KT+ ++ + + E+ V+K+LD HPN++++ + +++ME G+L
Sbjct: 52 IKTINKDRSQVPMEQIEAEIEVLKSLD-HPNIIKIFEVFEDYHNMYIVMETCEGGELLER 110
Query: 87 LRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE-- 144
+ S++A + +L+ + Q+ + + S+ ++H+DL N+L +
Sbjct: 111 IVSAQA---------RGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTS 161
Query: 145 -NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWE 203
+ K+ DFG A +L S + + G +MAPE ++ + K DIWS GV+++
Sbjct: 162 PHSPIKIIDFGLA-ELFKSDEHSTNAAGT--ALYMAPEVFKRDV-TFKCDIWSAGVVMYF 217
Query: 204 IVTLGSTPYPGMAAAEVMKKS 224
++T G P+ G + EV +K+
Sbjct: 218 LLT-GCLPFTGTSLEEVQQKA 237
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 105/209 (50%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L ++ E+E ++ L +E+ + L HPN++R+ +++ +++
Sbjct: 34 REKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNILRMYNYFHDRKRIYLM 92
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+E+ P G+L L+ HG+ + S +F ++A + + R +IHRD
Sbjct: 93 LEFAPRGELYKELQK----------HGRFDEQRS---ATFMEELADALHYCHERKVIHRD 139
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ + S+ R G L ++ PE + K D+
Sbjct: 140 IKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTL--DYLPPEMIEGKTHDEKVDL 195
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
W GVL +E + +G P+ + E ++
Sbjct: 196 WCAGVLCYEFL-VGMPPFDSPSHTETHRR 223
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 102/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 33 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 91
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G++ L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 92 LEYAPRGEVYKELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 138
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R++ + ++ PE + + K D+
Sbjct: 139 IKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEKVDL 194
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 195 WSLGVLCYEFL-VGKPPFEANTYQETYKR 222
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
+ +E + A K + + E E D + E+ ++ + D HPN+V+LL + ++++E
Sbjct: 57 QNKETSVLAAAKVI-DTKSEEELEDYMVEIDILASCD-HPNIVKLLDAFYYENNLWILIE 114
Query: 77 YVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLA 136
+ G + + M LT + C Q + +L IIHRDL
Sbjct: 115 FCAGGAVDAV------------MLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 137 ARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY-----DNIFSVK 191
A N+L + K+ADFG + T ++ R S P WMAPE + D + K
Sbjct: 163 AGNILFTLDGDIKLADFGVSAK-NTRTIQRRDSFIGTPY-WMAPEVVMCETSKDRPYDYK 220
Query: 192 SDIWSFGVLIWEIVTL 207
+D+WS G+ + E+ +
Sbjct: 221 ADVWSLGITLIEMAEI 236
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 54 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 112
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 113 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 159
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R+ + + ++ PE + + K D+
Sbjct: 160 IKPENLLLGSAGELKIADFGWSVHAPSS----RRDDLCGTLDYLPPEMIEGRMHDEKVDL 215
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 216 WSLGVLCYEFL-VGKPPFEANTYQETYKR 243
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E VM LD HP V+L C + E + + Y G+L ++R G
Sbjct: 86 RERDVMSRLD-HPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKI----------GSF 134
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ +R T+ ++ +++L +GIIHRDL N+L+ E+ ++ DFG A+ L S
Sbjct: 135 DETCTRFYTA---EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 191
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
R + ++++PE L + SD+W+ G +I+++V G P+
Sbjct: 192 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 239
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 31 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 89
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 90 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R+ + + ++ PE + + K D+
Sbjct: 137 IKPENLLLGSAGELKIADFGWSVHAPSS----RRDDLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 193 WSLGVLCYEFL-VGKPPFEANTYQETYKR 220
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 25/175 (14%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTE--KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHG 101
QE+ ++K LD HPNVV+L+ + ++ +++ E V G + M
Sbjct: 85 QEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPV---------------MEV 128
Query: 102 KSNSLTSRDLTSFCYQ-VARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ S D F +Q + +G+++L + IIHRD+ N+L+GE+ K+ADFG + +
Sbjct: 129 PTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 161 TSSVYERKSEGRLPIRWMAPESLYDN--IFSVKS-DIWSFGVLIWEIVTLGSTPY 212
S + G +MAPESL + IFS K+ D+W+ GV ++ V G P+
Sbjct: 189 GSDALLSNTVGT--PAFMAPESLSETRKIFSGKALDVWAMGVTLYCFV-FGQCPF 240
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 17 RGREGPCIVAVKTLK-ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIM 75
+ RE IVA+K ++ ++ E L+E+ ++K L H N+VRL + ++
Sbjct: 22 KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLVF 80
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E+ ++Y+++ +G L + SF +Q+ +G+ F SR ++HRDL
Sbjct: 81 EFC----------DQDLKKYFDSCNG---DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDL 127
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY--DNIFSVKSD 193
+N+LI N K+A+FG AR + R + W P + ++S D
Sbjct: 128 KPQNLLINRNGELKLANFGLARAF---GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSID 184
Query: 194 IWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
+WS G + E+ G +PG + +K+
Sbjct: 185 MWSAGCIFAELANAGRPLFPGNDVDDQLKR 214
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 54 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 112
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 113 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 159
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R++ + ++ PE + + K D+
Sbjct: 160 IKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEKVDL 215
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 216 WSLGVLCYEFL-VGKPPFEANTYQETYKR 243
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 45 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 103
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 104 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 150
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R++ + ++ PE + + K D+
Sbjct: 151 IKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEKVDL 206
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 207 WSLGVLCYEFL-VGKPPFEANTYQETYKR 234
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 31 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 89
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 90 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R++ + ++ PE + + K D+
Sbjct: 137 IKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 193 WSLGVLCYEFL-VGKPPFEANTYQETYKR 220
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 28 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 86
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 87 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R++ + ++ PE + + K D+
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 190 WSLGVLCYEFL-VGKPPFEANTYQETYKR 217
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 33 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 91
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 92 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 138
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R++ + ++ PE + + K D+
Sbjct: 139 IKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEKVDL 194
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 195 WSLGVLCYEFL-VGKPPFEANTYQETYKR 222
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 31 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 89
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 90 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R++ + ++ PE + + K D+
Sbjct: 137 IKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 193 WSLGVLCYEFL-VGKPPFEANTYQETYKR 220
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 27 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 85
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 86 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 132
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R++ + ++ PE + + K D+
Sbjct: 133 IKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEKVDL 188
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 189 WSLGVLCYEFL-VGKPPFEANTYQETYKR 216
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 28 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 86
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 87 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R++ + ++ PE + + K D+
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAPSS----RRAALCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 190 WSLGVLCYEFL-VGKPPFEANTYQETYKR 217
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 28 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 86
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 87 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R++ + ++ PE + + K D+
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAPSS----RRTXLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 190 WSLGVLCYEFL-VGKPPFEANTYQETYKR 217
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 33 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 91
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 92 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 138
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R++ + ++ PE + K D+
Sbjct: 139 IKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEXIEGRXHDEKVDL 194
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 195 WSLGVLCYEFL-VGKPPFEANTYQETYKR 222
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 31 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 89
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 90 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R++ + ++ PE + + K D+
Sbjct: 137 IKPENLLLGSAGELKIADFGWSVHAPSS----RRAALCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 193 WSLGVLCYEFL-VGKPPFEANTYQETYKR 220
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 32 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 90
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 91 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 137
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R++ + ++ PE + + K D+
Sbjct: 138 IKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEKVDL 193
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 194 WSLGVLCYEFL-VGKPPFEANTYQETYKR 221
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 17 RGREGPCIVAVKTLK-ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIM 75
+ RE IVA+K ++ ++ E L+E+ ++K L H N+VRL + ++
Sbjct: 22 KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLVF 80
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E+ ++Y+++ +G L + SF +Q+ +G+ F SR ++HRDL
Sbjct: 81 EFC----------DQDLKKYFDSCNG---DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDL 127
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY--DNIFSVKSD 193
+N+LI N K+ADFG AR + R + W P + ++S D
Sbjct: 128 KPQNLLINRNGELKLADFGLARAF---GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSID 184
Query: 194 IWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
+WS G + E+ +PG + +K+
Sbjct: 185 MWSAGCIFAELANAARPLFPGNDVDDQLKR 214
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 99/201 (49%), Gaps = 20/201 (9%)
Query: 25 VAVKTLKENAGERERLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
VAVK + + L L +E+ + K L+ HPN+V+L ++ +++ EY G++
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIXKVLN-HPNIVKLFEVIETEKTLYLVXEYASGGEV 100
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
+L + HG+ +R + Q+ +Q+ + I+HRDL A N+L+
Sbjct: 101 FDYLVA----------HGRXKEKEAR---AKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFS-VKSDIWSFGVLIW 202
+ K+ADFGF+ + + + G P + APE + + D+WS GV+++
Sbjct: 148 ADXNIKIADFGFSNEFTFGNKLDAFC-GAPP--YAAPELFQGKKYDGPEVDVWSLGVILY 204
Query: 203 EIVTLGSTPYPGMAAAEVMKK 223
+V+ GS P+ G E+ ++
Sbjct: 205 TLVS-GSLPFDGQNLKELRER 224
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 21/196 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
+ +E + A K + + E E D + E+ ++ + D HPN+V+LL + ++++E
Sbjct: 57 QNKETSVLAAAKVI-DTKSEEELEDYMVEIDILASCD-HPNIVKLLDAFYYENNLWILIE 114
Query: 77 YVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLA 136
+ G + + M LT + C Q + +L IIHRDL
Sbjct: 115 FCAGGAVDAV------------MLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 137 ARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY-----DNIFSVK 191
A N+L + K+ADFG + T + R S P WMAPE + D + K
Sbjct: 163 AGNILFTLDGDIKLADFGVSAK-NTRXIQRRDSFIGTPY-WMAPEVVMCETSKDRPYDYK 220
Query: 192 SDIWSFGVLIWEIVTL 207
+D+WS G+ + E+ +
Sbjct: 221 ADVWSLGITLIEMAEI 236
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E+V + L++F+ +S + G
Sbjct: 49 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDAS-------ALTGI 99
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 100 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 152
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 153 GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 29 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 87
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 88 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 134
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R+ + ++ PE + + K D+
Sbjct: 135 IKPENLLLGSAGELKIADFGWSVHAPSS----RRDTLCGTLDYLPPEMIEGRMHDEKVDL 190
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 191 WSLGVLCYEFL-VGKPPFEANTYQETYKR 218
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 30 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 88
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 89 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 135
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R+ + ++ PE + + K D+
Sbjct: 136 IKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLDYLPPEMIEGRMHDEKVDL 191
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 192 WSLGVLCYEFL-VGKPPFEANTYQETYKR 219
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 28 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 86
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 87 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R+ + ++ PE + + K D+
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 190 WSLGVLCYEFL-VGKPPFEANTYQETYKR 217
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 31 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 89
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 90 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R+ + ++ PE + + K D+
Sbjct: 137 IKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 193 WSLGVLCYEFL-VGKPPFEANTYQETYKR 220
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 25 REKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 83
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 84 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 130
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R++ + ++ PE + + K D+
Sbjct: 131 IKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEKVDL 186
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 187 WSLGVLCYEFL-VGKPPFEANTYQETYKR 214
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 28/188 (14%)
Query: 42 LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHG 101
LL+E+ V+K LD HPN+++L +K ++++ME G+L + +H
Sbjct: 83 LLEEVAVLKLLD-HPNIMKLYDFFEDKRNYYLVMECYKGGEL-----------FDEIIH- 129
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI---GENHCCKVADFGFARD 158
D QV G+ +L I+HRDL N+L+ ++ K+ DFG
Sbjct: 130 -RMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGL--- 185
Query: 159 LMTSSVYE--RKSEGRLPIR-WMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGM 215
S+V+E +K + RL ++APE L + K D+WS GV+++ I+ G P+ G
Sbjct: 186 ---SAVFENQKKMKERLGTAYYIAPEVLRKK-YDEKCDVWSIGVILF-ILLAGYPPFGGQ 240
Query: 216 AAAEVMKK 223
E+++K
Sbjct: 241 TDQEILRK 248
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 86/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L++F+ +S + G
Sbjct: 53 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDAS-------ALTGI 103
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 104 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 156
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 157 GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 55 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 114
H N+V ++ E + ++++MEY+ L ++ S HG L+ +F
Sbjct: 70 HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES----------HG---PLSVDTAINF 116
Query: 115 CYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLP 174
Q+ G++ I+HRD+ +N+LI N K+ DFG A+ L +S+ + +
Sbjct: 117 TNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL-TQTNHVLGT 175
Query: 175 IRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
+++ +PE +DI+S G++++E++ +G P+ G A + K
Sbjct: 176 VQYFSPEQAKGEATDECTDIYSIGIVLYEML-VGEPPFNGETAVSIAIK 223
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R + I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 28 REKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDSTRVYLI 86
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 87 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKKVIHRD 133
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ +S R++ + ++ PE + + K D+
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAPSS----RRAALCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ + K+
Sbjct: 190 WSLGVLCYEFL-VGKPPFEANTYQDTYKR 217
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 30 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 88
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 89 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 135
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+A+FG++ +S R++ + ++ PE + + K D+
Sbjct: 136 IKPENLLLGSAGELKIANFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEKVDL 191
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 192 WSLGVLCYEFL-VGKPPFEANTYQETYKR 219
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ I+A+K L + E+ ++ L +E+ + L HPN++RL G + ++I
Sbjct: 31 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLI 89
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G + L+ K + + ++ ++A + + S+ +IHRD
Sbjct: 90 LEYAPLGTVYRELQ-------------KLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+A+FG++ +S R++ + ++ PE + + K D+
Sbjct: 137 IKPENLLLGSAGELKIANFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
WS GVL +E + +G P+ E K+
Sbjct: 193 WSLGVLCYEFL-VGKPPFEANTYQETYKR 220
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 57 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 107
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 108 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 160
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 161 GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
Query: 45 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 104
E V+ LD P + +L C + + +MEYV G L Y+ GK
Sbjct: 69 EKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLM----------YHIQQVGKFK 118
Query: 105 SLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSV 164
+ + +++ G+ FL RGII+RDL NV++ K+ADFG ++ M V
Sbjct: 119 EPQA---VFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV 175
Query: 165 YERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMK 222
R+ G ++APE + + D W++GVL++E++ G P+ G E+ +
Sbjct: 176 TTREFCGT--PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLA-GQPPFDGEDEDELFQ 230
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 50 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 100
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 101 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 153
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 154 GVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 50 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 100
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 101 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 153
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 154 GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 49 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 99
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 100 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 152
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 153 GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 50 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 100
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 101 PLPL----IKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 153
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 154 GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 54 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 104
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 105 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 157
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 158 GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 21/196 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
+ +E + A K + + E E D + E+ ++ + D HPN+V+LL + ++++E
Sbjct: 57 QNKETSVLAAAKVI-DTKSEEELEDYMVEIDILASCD-HPNIVKLLDAFYYENNLWILIE 114
Query: 77 YVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLA 136
+ G + + M LT + C Q + +L IIHRDL
Sbjct: 115 FCAGGAVDAV------------MLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 137 ARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY-----DNIFSVK 191
A N+L + K+ADFG + + +R+ WMAPE + D + K
Sbjct: 163 AGNILFTLDGDIKLADFGVSA--KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYK 220
Query: 192 SDIWSFGVLIWEIVTL 207
+D+WS G+ + E+ +
Sbjct: 221 ADVWSLGITLIEMAEI 236
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 51 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 101
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 102 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 154
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 155 GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 49 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 99
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 100 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 152
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 153 GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 57 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 107
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 108 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 160
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 161 GVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 52 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 102
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 103 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 155
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 156 GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 50 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 100
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 101 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 153
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 154 GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 49 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 99
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 100 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 152
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 153 GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 19/183 (10%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E VM LD HP V+L + E + + Y G+L ++R G
Sbjct: 81 RERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSF 129
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ +R T+ ++ +++L +GIIHRDL N+L+ E+ ++ DFG A+ L S
Sbjct: 130 DETCTRFYTA---EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY----PGMAAAE 219
R + ++++PE L + SD+W+ G +I+++V G P+ G+ A+
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVA-GLPPFRAGNEGLIFAK 245
Query: 220 VMK 222
++K
Sbjct: 246 IIK 248
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 54 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 104
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 105 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 157
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 158 GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 50 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 100
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 101 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 153
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 154 GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 53 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 103
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 104 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 156
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 157 GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 52 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 102
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 103 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 155
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 156 GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 49 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 99
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 100 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 152
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 153 GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 50 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 100
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 101 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 153
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 154 GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 50 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 100
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 101 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 153
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 154 GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 50 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 100
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 101 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 153
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 154 GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 51 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 101
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 102 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 154
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 155 GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 51 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 101
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 102 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 154
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 155 GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 49 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 99
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 100 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 152
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 153 GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 53 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 103
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 104 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 156
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 157 GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 50 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 100
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 101 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 153
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 154 GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 19/183 (10%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E VM LD HP V+L + E + + Y G+L ++R G
Sbjct: 81 RERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSF 129
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ +R T+ ++ +++L +GIIHRDL N+L+ E+ ++ DFG A+ L S
Sbjct: 130 DETCTRFYTA---EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY----PGMAAAE 219
R + ++++PE L + SD+W+ G +I+++V G P+ G+ A+
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPFRAGNEGLIFAK 245
Query: 220 VMK 222
++K
Sbjct: 246 IIK 248
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 38/205 (18%)
Query: 24 IVAVKTL--KENAGERERLDLLQELT----VMKTLDPHPNVVRLLGCCTEKEPFFVIMEY 77
+VA+K+L ++ GE E ++ QE +M L+ HPN+V+L G P ++ME+
Sbjct: 46 VVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN-HPNIVKLYGLM--HNPPRMVMEF 102
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRG--IIHRDL 135
VP G L Y+ + K++ + +A G++++ ++ I+HRDL
Sbjct: 103 VPCGDL------------YHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDL 150
Query: 136 AARNVLI---GENH--CCKVADFGFARDLMTSSVYERKSEGRL-PIRWMAPESL--YDNI 187
+ N+ + EN C KVADFG ++ + S G L +WMAPE++ +
Sbjct: 151 RSPNIFLQSLDENAPVCAKVADFGLSQQSVHS------VSGLLGNFQWMAPETIGAEEES 204
Query: 188 FSVKSDIWSFGVLIWEIVTLGSTPY 212
++ K+D +SF ++++ I+T G P+
Sbjct: 205 YTEKADTYSFAMILYTILT-GEGPF 228
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 19/182 (10%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+EL ++K L H NV+ LL T P I ++ + +L ++ NN+ KS
Sbjct: 76 RELRLLKHLK-HENVIGLLDVFT---PATSIEDFS-----EVYLVTTLMGADLNNI-VKS 125
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+L+ + YQ+ RG++++ S GIIHRDL NV + E+ ++ DFG AR
Sbjct: 126 QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA---- 181
Query: 164 VYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVM 221
+ + G + RW APE + + + ++ DIWS G ++ E++ G +PG + +
Sbjct: 182 --DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQ-GKALFPGSDYIDQL 238
Query: 222 KK 223
K+
Sbjct: 239 KR 240
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 50 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDAS-------ALTGI 100
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL N+LI K+ADFG AR
Sbjct: 101 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--- 153
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 154 GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 52 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 102
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL N+LI K+ADFG AR
Sbjct: 103 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--- 155
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 156 GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ + L+ F+ +S + G
Sbjct: 51 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGI 101
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL N+LI K+ADFG AR
Sbjct: 102 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--- 154
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 155 GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 91/187 (48%), Gaps = 32/187 (17%)
Query: 36 ERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL-QSFLRSSRAQR 94
++ + D +E+ ++ HPN++ L + + +V+ E + G+L LR Q+
Sbjct: 56 DKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILR----QK 111
Query: 95 YYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI----GENHCCKV 150
++ + R+ ++ + + + +++L ++G++HRDL N+L G ++
Sbjct: 112 FF----------SEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRI 161
Query: 151 ADFGFARDLMTSSVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIV 205
DFGFA+ L R G L ++APE L + DIWS GVL++ ++
Sbjct: 162 CDFGFAKQL-------RAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTML 214
Query: 206 TLGSTPY 212
T G TP+
Sbjct: 215 T-GYTPF 220
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 19/195 (9%)
Query: 17 RGREGPCIVAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFV 73
+G VAVK L + E + QE+ VM H N+V LLG ++ + +
Sbjct: 49 KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ-HENLVELLGFSSDGDDLCL 107
Query: 74 IMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHR 133
+ Y+P G L L + L+ A G+ FL IHR
Sbjct: 108 VYVYMPNGSLLDRLSCLDG----------TPPLSWHMRCKIAQGAANGINFLHENHHIHR 157
Query: 134 DLAARNVLIGENHCCKVADFGFAR--DLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVK 191
D+ + N+L+ E K++DFG AR + +V + G +MAPE+L I + K
Sbjct: 158 DIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTA--YMAPEALRGEI-TPK 214
Query: 192 SDIWSFGVLIWEIVT 206
SDI+SFGV++ EI+T
Sbjct: 215 SDIYSFGVVLLEIIT 229
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 22/187 (11%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R D+ +E++++K + HPNV+ L K +I+E V G+L FL
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFL----------- 105
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC----CKVADFG 154
+ SLT + T F Q+ G+ +L S I H DL N+++ + + K+ DFG
Sbjct: 106 --AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 155 FARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
A + + E K+ P ++APE + +++D+WS GV+ + I+ G++P+ G
Sbjct: 164 LAHKIDFGN--EFKNIFGTP-EFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLG 219
Query: 215 MAAAEVM 221
E +
Sbjct: 220 DTKQETL 226
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 19/195 (9%)
Query: 17 RGREGPCIVAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFV 73
+G VAVK L + E + QE+ VM H N+V LLG ++ + +
Sbjct: 49 KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ-HENLVELLGFSSDGDDLCL 107
Query: 74 IMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHR 133
+ Y+P G L L + L+ A G+ FL IHR
Sbjct: 108 VYVYMPNGSLLDRLSCLDG----------TPPLSWHMRCKIAQGAANGINFLHENHHIHR 157
Query: 134 DLAARNVLIGENHCCKVADFGFAR--DLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVK 191
D+ + N+L+ E K++DFG AR + +V + G +MAPE+L I + K
Sbjct: 158 DIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTA--YMAPEALRGEI-TPK 214
Query: 192 SDIWSFGVLIWEIVT 206
SDI+SFGV++ EI+T
Sbjct: 215 SDIYSFGVVLLEIIT 229
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 22/187 (11%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R D+ +E++++K + HPNV+ L K +I+E V G+L FL
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFL----------- 105
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC----CKVADFG 154
+ SLT + T F Q+ G+ +L S I H DL N+++ + + K+ DFG
Sbjct: 106 --AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 155 FARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
A + + E K+ P ++APE + +++D+WS GV+ + I+ G++P+ G
Sbjct: 164 LAHKIDFGN--EFKNIFGTP-EFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLG 219
Query: 215 MAAAEVM 221
E +
Sbjct: 220 DTKQETL 226
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E VM LD HP V+L + E + + Y G L ++R G
Sbjct: 81 RERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKI----------GSF 129
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ +R T+ ++ +++L +GIIHRDL N+L+ E+ ++ DFG A+ L S
Sbjct: 130 DETCTRFYTA---EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
R + ++++PE L + S SD+W+ G +I+++V G P+
Sbjct: 187 KQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVA-GLPPF 234
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E+V L+ F+ +S + G
Sbjct: 53 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEHVD-QDLKKFMDAS-------ALTGI 103
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 104 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 156
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 157 GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 22/187 (11%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R D+ +E++++K + HPNV+ L K +I+E V G+L FL
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFL----------- 105
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC----CKVADFG 154
+ SLT + T F Q+ G+ +L S I H DL N+++ + + K+ DFG
Sbjct: 106 --AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 155 FARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
A + + E K+ P ++APE + +++D+WS GV+ + I+ G++P+ G
Sbjct: 164 LAHKIDFGN--EFKNIFGTP-EFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLG 219
Query: 215 MAAAEVM 221
E +
Sbjct: 220 DTKQETL 226
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 38/205 (18%)
Query: 24 IVAVKTL--KENAGERERLDLLQELT----VMKTLDPHPNVVRLLGCCTEKEPFFVIMEY 77
+VA+K+L ++ GE E ++ QE +M L+ HPN+V+L G P ++ME+
Sbjct: 46 VVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN-HPNIVKLYGLM--HNPPRMVMEF 102
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRG--IIHRDL 135
VP G L Y+ + K++ + +A G++++ ++ I+HRDL
Sbjct: 103 VPCGDL------------YHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDL 150
Query: 136 AARNVLI---GENH--CCKVADFGFARDLMTSSVYERKSEGRL-PIRWMAPESL--YDNI 187
+ N+ + EN C KVADFG TS G L +WMAPE++ +
Sbjct: 151 RSPNIFLQSLDENAPVCAKVADFG------TSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 188 FSVKSDIWSFGVLIWEIVTLGSTPY 212
++ K+D +SF ++++ I+T G P+
Sbjct: 205 YTEKADTYSFAMILYTILT-GEGPF 228
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 22/187 (11%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R D+ +E++++K + HPNV+ L K +I+E V G+L FL
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFL----------- 105
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC----CKVADFG 154
+ SLT + T F Q+ G+ +L S I H DL N+++ + + K+ DFG
Sbjct: 106 --AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 155 FARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
A + + E K+ P ++APE + +++D+WS GV+ + I+ G++P+ G
Sbjct: 164 LAHKIDFGN--EFKNIFGTP-EFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLG 219
Query: 215 MAAAEVM 221
E +
Sbjct: 220 DTKQETL 226
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 22/187 (11%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R D+ +E++++K + HPNV+ L K +I+E V G+L FL
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFL----------- 105
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC----CKVADFG 154
+ SLT + T F Q+ G+ +L S I H DL N+++ + + K+ DFG
Sbjct: 106 --AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 155 FARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
A + + E K+ P ++APE + +++D+WS GV+ + I+ G++P+ G
Sbjct: 164 LAHKIDFGN--EFKNIFGTP-EFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLG 219
Query: 215 MAAAEVM 221
E +
Sbjct: 220 DTKQETL 226
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 22/187 (11%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R D+ +E++++K + HPNV+ L K +I+E V G+L FL
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFL----------- 105
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC----CKVADFG 154
+ SLT + T F Q+ G+ +L S I H DL N+++ + + K+ DFG
Sbjct: 106 --AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 155 FARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
A + + E K+ P ++APE + +++D+WS GV+ + I+ G++P+ G
Sbjct: 164 LAHKIDFGN--EFKNIFGTP-EFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLG 219
Query: 215 MAAAEVM 221
E +
Sbjct: 220 DTKQETL 226
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 22/187 (11%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R D+ +E++++K + HPNV+ L K +I+E V G+L FL
Sbjct: 57 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFL----------- 104
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC----CKVADFG 154
+ SLT + T F Q+ G+ +L S I H DL N+++ + + K+ DFG
Sbjct: 105 --AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 162
Query: 155 FARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
A + + E K+ P ++APE + +++D+WS GV+ + I+ G++P+ G
Sbjct: 163 LAHKIDFGN--EFKNIFGTP-EFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLG 218
Query: 215 MAAAEVM 221
E +
Sbjct: 219 DTKQETL 225
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 22/187 (11%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R D+ +E++++K + HPNV+ L K +I+E V G+L FL
Sbjct: 57 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFL----------- 104
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC----CKVADFG 154
+ SLT + T F Q+ G+ +L S I H DL N+++ + + K+ DFG
Sbjct: 105 --AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 162
Query: 155 FARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
A + + E K+ P ++APE + +++D+WS GV+ + I+ G++P+ G
Sbjct: 163 LAHKIDFGN--EFKNIFGTP-EFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLG 218
Query: 215 MAAAEVM 221
E +
Sbjct: 219 DTKQETL 225
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 22/187 (11%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R D+ +E++++K + HPNV+ L K +I+E V G+L FL
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFL----------- 105
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC----CKVADFG 154
+ SLT + T F Q+ G+ +L S I H DL N+++ + + K+ DFG
Sbjct: 106 --AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 155 FARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
A + + E K+ P ++APE + +++D+WS GV+ + I+ G++P+ G
Sbjct: 164 LAHKIDFGN--EFKNIFGTP-EFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLG 219
Query: 215 MAAAEVM 221
E +
Sbjct: 220 DTKQETL 226
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 22/187 (11%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R D+ +E++++K + HPNV+ L K +I+E V G+L FL
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFL----------- 105
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC----CKVADFG 154
+ SLT + T F Q+ G+ +L S I H DL N+++ + + K+ DFG
Sbjct: 106 --AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 155 FARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
A + + E K+ P ++APE + +++D+WS GV+ + I+ G++P+ G
Sbjct: 164 LAHKIDFGN--EFKNIFGTP-EFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLG 219
Query: 215 MAAAEVM 221
E +
Sbjct: 220 DTKQETL 226
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 22/187 (11%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R D+ +E++++K + HPNV+ L K +I+E V G+L FL
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFL----------- 105
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC----CKVADFG 154
+ SLT + T F Q+ G+ +L S I H DL N+++ + + K+ DFG
Sbjct: 106 --AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 155 FARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
A + + E K+ P ++APE + +++D+WS GV+ + I+ G++P+ G
Sbjct: 164 LAHKIDFGN--EFKNIFGTP-EFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLG 219
Query: 215 MAAAEVM 221
E +
Sbjct: 220 DTKQETL 226
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 103/205 (50%), Gaps = 29/205 (14%)
Query: 26 AVKTL-KENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
AVK + K +A ++ +L+E+ ++K LD HPN+++L + F+++ E G+L
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLD-HPNIMKLFEILEDSSSFYIVGELYTGGEL- 108
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI-- 142
F + +R+ + D QV G+ ++ I+HRDL N+L+
Sbjct: 109 -FDEIIKRKRF-----------SEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLES 156
Query: 143 GENHC-CKVADFGFARDLMTSSVYERKSEGRLPI---RWMAPESLYDNIFSVKSDIWSFG 198
E C K+ DFG S+ +++ ++ + I ++APE L + K D+WS G
Sbjct: 157 KEKDCDIKIIDFGL------STCFQQNTKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAG 209
Query: 199 VLIWEIVTLGSTPYPGMAAAEVMKK 223
V+++ I+ G+ P+ G +++K+
Sbjct: 210 VILY-ILLSGTPPFYGKNEYDILKR 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E VM LD HP V+L + E + + Y G+L ++R G
Sbjct: 79 RERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSF 127
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ +R T+ ++ +++L +GIIHRDL N+L+ E+ ++ DFG A+ L S
Sbjct: 128 DETCTRFYTA---EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
R + ++++PE L + SD+W+ G +I+++V G P+
Sbjct: 185 KQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 232
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E VM LD HP V+L + E + + Y G+L ++R G
Sbjct: 79 RERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSF 127
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ +R T+ ++ +++L +GIIHRDL N+L+ E+ ++ DFG A+ L S
Sbjct: 128 DETCTRFYTA---EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
R + ++++PE L + SD+W+ G +I+++V G P+
Sbjct: 185 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 232
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E VM LD HP V+L + E + + Y G+L ++R G
Sbjct: 58 RERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSF 106
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ +R T+ ++ +++L +GIIHRDL N+L+ E+ ++ DFG A+ L S
Sbjct: 107 DETCTRFYTA---EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 163
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
R + ++++PE L + SD+W+ G +I+++V G P+
Sbjct: 164 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 211
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E VM LD HP V+L + E + + Y G+L ++R G
Sbjct: 82 RERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSF 130
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ +R T+ ++ +++L +GIIHRDL N+L+ E+ ++ DFG A+ L S
Sbjct: 131 DETCTRFYTA---EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 187
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
R + ++++PE L + SD+W+ G +I+++V G P+
Sbjct: 188 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 235
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E VM LD HP V+L + E + + Y G+L ++R G
Sbjct: 81 RERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSF 129
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ +R T+ ++ +++L +GIIHRDL N+L+ E+ ++ DFG A+ L S
Sbjct: 130 DETCTRFYTA---EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
R + ++++PE L + SD+W+ G +I+++V G P+
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 234
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 18/198 (9%)
Query: 17 RGREGPCIVAVKTLKENA--GERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R +E + AVK LK++ + + + E ++ HP + +L C + F +
Sbjct: 43 RVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV 102
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
ME+V G L ++ SR + + +R + ++ + FL +GII+RD
Sbjct: 103 MEFVNGGDLMFHIQKSR----------RFDEARAR---FYAAEIISALMFLHDKGIIYRD 149
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
L NVL+ CK+ADFG ++ + + V G ++APE L + ++ D
Sbjct: 150 LKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGT--PDYIAPEILQEMLYGPAVDW 207
Query: 195 WSFGVLIWEIVTLGSTPY 212
W+ GVL++E++ G P+
Sbjct: 208 WAMGVLLYEMLC-GHAPF 224
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E VM LD HP V+L + E + + Y G+L ++R G
Sbjct: 81 RERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSF 129
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ +R T+ ++ +++L +GIIHRDL N+L+ E+ ++ DFG A+ L S
Sbjct: 130 DETCTRFYTA---EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
R + ++++PE L + SD+W+ G +I+++V G P+
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 234
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E VM LD HP V+L + E + + Y G+L ++R G
Sbjct: 82 RERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSF 130
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ +R T+ ++ +++L +GIIHRDL N+L+ E+ ++ DFG A+ L S
Sbjct: 131 DETCTRFYTA---EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 187
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
R + ++++PE L + SD+W+ G +I+++V G P+
Sbjct: 188 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 235
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ L+ F+ +S + G
Sbjct: 53 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDAS-------ALTGI 103
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 104 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 156
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 157 GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E VM LD HP V+L + E + + Y G+L ++R G
Sbjct: 56 RERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSF 104
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ +R T+ ++ +++L +GIIHRDL N+L+ E+ ++ DFG A+ L S
Sbjct: 105 DETCTRFYTA---EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 161
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
R + ++++PE L + SD+W+ G +I+++V G P+
Sbjct: 162 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 209
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ L+ F+ +S + G
Sbjct: 52 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDAS-------ALTGI 102
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL +N+LI K+ADFG AR
Sbjct: 103 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--- 155
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 156 GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E VM LD HP V+L + E + + Y G+L ++R G
Sbjct: 57 RERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSF 105
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ +R T+ ++ +++L +GIIHRDL N+L+ E+ ++ DFG A+ L S
Sbjct: 106 DETCTRFYTA---EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 162
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
R + ++++PE L + SD+W+ G +I+++V G P+
Sbjct: 163 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 210
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E VM LD HP V+L + E + + Y G+L ++R G
Sbjct: 59 RERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSF 107
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ +R T+ ++ +++L +GIIHRDL N+L+ E+ ++ DFG A+ L S
Sbjct: 108 DETCTRFYTA---EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 164
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
R + ++++PE L + SD+W+ G +I+++V G P+
Sbjct: 165 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 212
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E VM LD HP V+L + E + + Y G+L ++R G
Sbjct: 79 RERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSF 127
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ +R T+ ++ +++L +GIIHRDL N+L+ E+ ++ DFG A+ L S
Sbjct: 128 DETCTRFYTA---EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
R + ++++PE L + SD+W+ G +I+++V G P+
Sbjct: 185 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 232
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E VM LD HP V+L + E + + Y G+L ++R G
Sbjct: 81 RERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSF 129
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ +R T+ ++ +++L +GIIHRDL N+L+ E+ ++ DFG A+ L S
Sbjct: 130 DETCTRFYTA---EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
R + ++++PE L + SD+W+ G +I+++V G P+
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 234
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 90/191 (47%), Gaps = 18/191 (9%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
+A+K + E R L +E+ + K L H N+V+ LG +E + ME VP G L
Sbjct: 36 IAIKEIPERD-SRYSQPLHEEIALHKHLK-HKNIVQYLGSFSENGFIKIFMEQVPGGSLS 93
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+ LRS K N T + + Q+ G+++L I+HRD+ NVLI
Sbjct: 94 ALLRSKWGPL-------KDNEQT---IGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT 143
Query: 145 -NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI--FSVKSDIWSFGVLI 201
+ K++DFG ++ L + G L ++MAPE + + +DIWS G I
Sbjct: 144 YSGVLKISDFGTSKRLAGINPCTETFTGTL--QYMAPEIIDKGPRGYGKAADIWSLGCTI 201
Query: 202 WEIVTLGSTPY 212
E+ T G P+
Sbjct: 202 IEMAT-GKPPF 211
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E VM LD HP V+L + E + + Y G+L ++R G
Sbjct: 84 RERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSF 132
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ +R T+ ++ +++L +GIIHRDL N+L+ E+ ++ DFG A+ L S
Sbjct: 133 DETCTRFYTA---EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 189
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
R + ++++PE L + SD+W+ G +I+++V G P+
Sbjct: 190 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 237
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKE--PFFVI 74
R +G +V + + E E+ L+ E+ +++ L HPN+VR ++ +++
Sbjct: 27 RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLYIV 85
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLT-SFCYQVARGMQFLSSRGIIHR 133
MEY G L S + +R Y + +T L C++ + G ++HR
Sbjct: 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG-----GHTVLHR 140
Query: 134 DLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSD 193
DL NV + K+ DFG AR L + + + G P +M+PE + ++ KSD
Sbjct: 141 DLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVG-TPY-YMSPEQMNRMSYNEKSD 198
Query: 194 IWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
IWS G L++E+ L P+ + E+ K
Sbjct: 199 IWSLGCLLYELCAL-MPPFTAFSQKELAGK 227
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E VM LD HP V+L + E + + Y G+L ++R G
Sbjct: 78 RERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSF 126
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ +R T+ ++ +++L +GIIHRDL N+L+ E+ ++ DFG A+ L S
Sbjct: 127 DETCTRFYTA---EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 183
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
R + ++++PE L + SD+W+ G +I+++V G P+
Sbjct: 184 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 231
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E VM LD HP V+L + E + + Y G+L ++R G
Sbjct: 78 RERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSF 126
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ +R T+ ++ +++L +GIIHRDL N+L+ E+ ++ DFG A+ L S
Sbjct: 127 DETCTRFYTA---EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 183
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
R + ++++PE L + SD+W+ G +I+++V G P+
Sbjct: 184 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 231
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 90/191 (47%), Gaps = 18/191 (9%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
+A+K + E R L +E+ + K L H N+V+ LG +E + ME VP G L
Sbjct: 50 IAIKEIPERD-SRYSQPLHEEIALHKHLK-HKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+ LRS K N T + + Q+ G+++L I+HRD+ NVLI
Sbjct: 108 ALLRSKWGPL-------KDNEQT---IGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT 157
Query: 145 -NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI--FSVKSDIWSFGVLI 201
+ K++DFG ++ L + G L ++MAPE + + +DIWS G I
Sbjct: 158 YSGVLKISDFGTSKRLAGINPCTETFTGTL--QYMAPEIIDKGPRGYGKAADIWSLGCTI 215
Query: 202 WEIVTLGSTPY 212
E+ T G P+
Sbjct: 216 IEMAT-GKPPF 225
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E VM LD HP V+L + E + + Y G+L ++R G
Sbjct: 79 RERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSF 127
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ +R T+ ++ +++L +GIIHRDL N+L+ E+ ++ DFG A+ L S
Sbjct: 128 DETCTRFYTA---EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
R + ++++PE L + SD+W+ G +I+++V G P+
Sbjct: 185 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 232
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKE--PFFVI 74
R +G +V + + E E+ L+ E+ +++ L HPN+VR ++ +++
Sbjct: 27 RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLYIV 85
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLT-SFCYQVARGMQFLSSRGIIHR 133
MEY G L S + +R Y + +T L C++ + G ++HR
Sbjct: 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG-----GHTVLHR 140
Query: 134 DLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSD 193
DL NV + K+ DFG AR L + + + G P +M+PE + ++ KSD
Sbjct: 141 DLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVG-TPY-YMSPEQMNRMSYNEKSD 198
Query: 194 IWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
IWS G L++E+ L P+ + E+ K
Sbjct: 199 IWSLGCLLYELCAL-MPPFTAFSQKELAGK 227
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E VM LD HP V+L + E + + Y G+L ++R G
Sbjct: 63 RERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSF 111
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ +R T+ ++ +++L +GIIHRDL N+L+ E+ ++ DFG A+ L S
Sbjct: 112 DETCTRFYTA---EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 168
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
R + ++++PE L + SD+W+ G +I+++V G P+
Sbjct: 169 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 216
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 22/187 (11%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R D+ +E++++K + HPNV+ L K +I+E V G+L FL
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFL----------- 105
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC----CKVADFG 154
+ SLT + T F Q+ G+ +L S I H DL N+++ + + K+ DFG
Sbjct: 106 --AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 155 FARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
A + + E K+ P ++APE + +++D+WS GV+ + I+ G++P+ G
Sbjct: 164 LAHKIDFGN--EFKNIFGTP-EFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLG 219
Query: 215 MAAAEVM 221
E +
Sbjct: 220 DTKQETL 226
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 88/195 (45%), Gaps = 19/195 (9%)
Query: 17 RGREGPCIVAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFV 73
+G VAVK L + E + QE+ VM H N+V LLG ++ + +
Sbjct: 43 KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ-HENLVELLGFSSDGDDLCL 101
Query: 74 IMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHR 133
+ Y+P G L L + L+ A G+ FL IHR
Sbjct: 102 VYVYMPNGSLLDRLSCLDG----------TPPLSWHMRCKIAQGAANGINFLHENHHIHR 151
Query: 134 DLAARNVLIGENHCCKVADFGFAR--DLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVK 191
D+ + N+L+ E K++DFG AR + V + G +MAPE+L I + K
Sbjct: 152 DIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTA--YMAPEALRGEI-TPK 208
Query: 192 SDIWSFGVLIWEIVT 206
SDI+SFGV++ EI+T
Sbjct: 209 SDIYSFGVVLLEIIT 223
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKE--PFFVI 74
R +G +V + + E E+ L+ E+ +++ L HPN+VR ++ +++
Sbjct: 27 RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLYIV 85
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLT-SFCYQVARGMQFLSSRGIIHR 133
MEY G L S + +R Y + +T L C++ + G ++HR
Sbjct: 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG-----GHTVLHR 140
Query: 134 DLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSD 193
DL NV + K+ DFG AR L + ++ G P +M+PE + ++ KSD
Sbjct: 141 DLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVG-TPY-YMSPEQMNRMSYNEKSD 198
Query: 194 IWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
IWS G L++E+ L P+ + E+ K
Sbjct: 199 IWSLGCLLYELCAL-MPPFTAFSQKELAGK 227
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ L+ F+ +S + G
Sbjct: 53 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDAS-------ALTGI 103
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL N+LI K+ADFG AR
Sbjct: 104 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--- 156
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 157 GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 18/166 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L+ HPN+V+LL + +++ E++ L+ F+ +S + G
Sbjct: 51 IREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDAS-------ALTGI 101
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
L + S+ +Q+ +G+ F S ++HRDL N+LI K+ADFG AR
Sbjct: 102 PLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--- 154
Query: 163 SVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEIVT 206
V R + W APE L +S DIWS G + E+VT
Sbjct: 155 GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 103/205 (50%), Gaps = 29/205 (14%)
Query: 26 AVKTL-KENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
AVK + K +A ++ +L+E+ ++K LD HPN+++L + F+++ E G+L
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLD-HPNIMKLFEILEDSSSFYIVGELYTGGEL- 108
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI-- 142
F + +R+ + D QV G+ ++ I+HRDL N+L+
Sbjct: 109 -FDEIIKRKRF-----------SEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLES 156
Query: 143 GENHC-CKVADFGFARDLMTSSVYERKSEGRLPI---RWMAPESLYDNIFSVKSDIWSFG 198
E C K+ DFG S+ +++ ++ + I ++APE L + K D+WS G
Sbjct: 157 KEKDCDIKIIDFGL------STCFQQNTKMKDRIGTAYYIAPEVL-RGTYDEKCDVWSAG 209
Query: 199 VLIWEIVTLGSTPYPGMAAAEVMKK 223
V+++ I+ G+ P+ G +++K+
Sbjct: 210 VILY-ILLSGTPPFYGKNEYDILKR 233
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDL-LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIM 75
R R+ IVA+K E+ + + L+E+ ++K L HPN+V LL K ++
Sbjct: 23 RNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK-HPNLVNLLEVFRRKRRLHLVF 81
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
EY + L R R + + S +Q + + F IHRD+
Sbjct: 82 EYCDHTVLHELDRYQRG-------------VPEHLVKSITWQTLQAVNFCHKHNCIHRDV 128
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWM-APESLY-DNIFSVKSD 193
N+LI ++ K+ DFGFAR L S Y + + RW +PE L D + D
Sbjct: 129 KPENILITKHSVIKLCDFGFARLLTGPSDY---YDDEVATRWYRSPELLVGDTQYGPPVD 185
Query: 194 IWSFGVLIWEIVTLGSTPYPGMAAAEVM 221
+W+ G + E+++ G +PG + + +
Sbjct: 186 VWAIGCVFAELLS-GVPLWPGKSDVDQL 212
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 103/205 (50%), Gaps = 29/205 (14%)
Query: 26 AVKTL-KENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
AVK + K +A ++ +L+E+ ++K LD HPN+++L + F+++ E G+L
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLD-HPNIMKLFEILEDSSSFYIVGELYTGGEL- 108
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI-- 142
F + +R+ + D QV G+ ++ I+HRDL N+L+
Sbjct: 109 -FDEIIKRKRF-----------SEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLES 156
Query: 143 GENHC-CKVADFGFARDLMTSSVYERKSEGRLPI---RWMAPESLYDNIFSVKSDIWSFG 198
E C K+ DFG S+ +++ ++ + I ++APE L + K D+WS G
Sbjct: 157 KEKDCDIKIIDFGL------STCFQQNTKMKDRIGTAYYIAPEVL-RGTYDEKCDVWSAG 209
Query: 199 VLIWEIVTLGSTPYPGMAAAEVMKK 223
V+++ I+ G+ P+ G +++K+
Sbjct: 210 VILY-ILLSGTPPFYGKNEYDILKR 233
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 22/187 (11%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R D+ +E++++K + HPNV+ L K +I+E V G+L FL
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFL----------- 105
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC----CKVADFG 154
+ SLT + T F Q+ G+ +L S I H DL N+++ + + K+ DFG
Sbjct: 106 --AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 155 FARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
A + + E K+ P ++APE + +++D+WS GV+ + I+ G++P+ G
Sbjct: 164 LAHKIDFGN--EFKNIFGTPA-FVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLG 219
Query: 215 MAAAEVM 221
E +
Sbjct: 220 DTKQETL 226
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 89/187 (47%), Gaps = 32/187 (17%)
Query: 36 ERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL-QSFLRSSRAQR 94
++ + D +E+ ++ HPN++ L + + +V+ E G+L LR Q+
Sbjct: 56 DKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILR----QK 111
Query: 95 YYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI----GENHCCKV 150
++ + R+ ++ + + + +++L ++G++HRDL N+L G ++
Sbjct: 112 FF----------SEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRI 161
Query: 151 ADFGFARDLMTSSVYERKSEGRLPI-----RWMAPESLYDNIFSVKSDIWSFGVLIWEIV 205
DFGFA+ L R G L ++APE L + DIWS GVL++ +
Sbjct: 162 CDFGFAKQL-------RAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXL 214
Query: 206 TLGSTPY 212
T G TP+
Sbjct: 215 T-GYTPF 220
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 30/204 (14%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
+A K +K G +++ ++ E++VM LD H N+++L K ++MEYV G+L
Sbjct: 117 LAAKIIK-TRGMKDKEEVKNEISVMNQLD-HANLIQLYDAFESKNDIVLVMEYVDGGEL- 173
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++ + +S +LT D F Q+ G++ + I+H DL N+L
Sbjct: 174 -----------FDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN 222
Query: 145 NHC--CKVADFGFARDLMTSSVYERKSEGRLPI-----RWMAPESLYDNIFSVKSDIWSF 197
K+ DFG AR K +L + ++APE + + S +D+WS
Sbjct: 223 RDAKQIKIIDFGLAR--------RYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSV 274
Query: 198 GVLIWEIVTLGSTPYPGMAAAEVM 221
GV+ + +++ G +P+ G AE +
Sbjct: 275 GVIAYMLLS-GLSPFLGDNDAETL 297
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 31/198 (15%)
Query: 19 REGPCIVAVKTLKENAGERER-LDLLQELTVMKTLDP--HPNVVRLLGCCT-----EKEP 70
+ G VA+K ++ GE L ++E+ V++ L+ HPNVVRL CT +
Sbjct: 34 KNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETK 93
Query: 71 FFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGI 130
++ E+V L ++L + + + +Q+ RG+ FL S +
Sbjct: 94 LTLVFEHVDQ-DLTTYLDKV-----------PEPGVPTETIKDMMFQLLRGLDFLHSHRV 141
Query: 131 IHRDLAARNVLIGENHCCKVADFGFAR----DLMTSSVYERKSEGRLPIRWMAPESLYDN 186
+HRDL +N+L+ + K+ADFG AR + +SV + + + APE L +
Sbjct: 142 VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV-------VTLWYRAPEVLLQS 194
Query: 187 IFSVKSDIWSFGVLIWEI 204
++ D+WS G + E+
Sbjct: 195 SYATPVDLWSVGCIFAEM 212
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 31/198 (15%)
Query: 19 REGPCIVAVKTLKENAGERER-LDLLQELTVMKTLDP--HPNVVRLLGCCT-----EKEP 70
+ G VA+K ++ GE L ++E+ V++ L+ HPNVVRL CT +
Sbjct: 34 KNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETK 93
Query: 71 FFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGI 130
++ E+V L ++L + + + +Q+ RG+ FL S +
Sbjct: 94 LTLVFEHVDQ-DLTTYLDKV-----------PEPGVPTETIKDMMFQLLRGLDFLHSHRV 141
Query: 131 IHRDLAARNVLIGENHCCKVADFGFAR----DLMTSSVYERKSEGRLPIRWMAPESLYDN 186
+HRDL +N+L+ + K+ADFG AR + +SV + + + APE L +
Sbjct: 142 VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV-------VTLWYRAPEVLLQS 194
Query: 187 IFSVKSDIWSFGVLIWEI 204
++ D+WS G + E+
Sbjct: 195 SYATPVDLWSVGCIFAEM 212
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 32/214 (14%)
Query: 17 RGREGPCIVAVKTLK-ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCC-TEKEPF-FV 73
+GR + VK LK + R+ D +E ++ HPNV+ +LG C + P +
Sbjct: 28 KGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFS-HPNVLPVLGACQSPPAPHPTL 86
Query: 74 IMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR-DLTSFCYQVARGMQFLSS-RGII 131
I ++PYG L YN +H +N + + F +ARGM FL + +I
Sbjct: 87 ITHWMPYGSL------------YNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLI 134
Query: 132 HRD-LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRL-PIRWMAPESLY---DN 186
R L +R+V+I E+ +++ M + +S GR+ W+APE+L ++
Sbjct: 135 PRHALNSRSVMIDEDMTARIS--------MADVKFSFQSPGRMYAPAWVAPEALQKKPED 186
Query: 187 IFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEV 220
+D+WSF VL+WE+VT P+ ++ E+
Sbjct: 187 TNRRSADMWSFAVLLWELVT-REVPFADLSNMEI 219
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 31/198 (15%)
Query: 19 REGPCIVAVKTLKENAGERER-LDLLQELTVMKTLDP--HPNVVRLLGCCT-----EKEP 70
+ G VA+K ++ GE L ++E+ V++ L+ HPNVVRL CT +
Sbjct: 34 KNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETK 93
Query: 71 FFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGI 130
++ E+V L ++L + + + +Q+ RG+ FL S +
Sbjct: 94 LTLVFEHVDQ-DLTTYLDKV-----------PEPGVPTETIKDMMFQLLRGLDFLHSHRV 141
Query: 131 IHRDLAARNVLIGENHCCKVADFGFAR----DLMTSSVYERKSEGRLPIRWMAPESLYDN 186
+HRDL +N+L+ + K+ADFG AR + +SV + + + APE L +
Sbjct: 142 VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV-------VTLWYRAPEVLLQS 194
Query: 187 IFSVKSDIWSFGVLIWEI 204
++ D+WS G + E+
Sbjct: 195 SYATPVDLWSVGCIFAEM 212
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 17/202 (8%)
Query: 23 CIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGK 82
C A+K ++ E R +++E+ + L+ HP +VR EK + P
Sbjct: 31 CNYAIKRIRLPNRELAREKVMREVKALAKLE-HPGIVRYFNAWLEKNTTEKLQPSSPKVY 89
Query: 83 LQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCY----QVARGMQFLSSRGIIHRDLAAR 138
L ++ R + + M+G+ ++ R+ S C Q+A ++FL S+G++HRDL
Sbjct: 90 LYIQMQLCRKENLKDWMNGRC-TIEERE-RSVCLHIFLQIAEAVEFLHSKGLMHRDLKPS 147
Query: 139 NVLIGENHCCKVADFGFA---------RDLMTSSVYERKSEGRLPIR-WMAPESLYDNIF 188
N+ + KV DFG + ++T + G++ + +M+PE ++ N +
Sbjct: 148 NIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSY 207
Query: 189 SVKSDIWSFGVLIWEIVTLGST 210
S K DI+S G++++E++ ST
Sbjct: 208 SHKVDIFSLGLILFELLYPFST 229
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 36 ERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL-QSFLRSSRAQR 94
++ + D +E+ ++ HPN++ L + + +++ E + G+L LR Q+
Sbjct: 61 DKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILR----QK 116
Query: 95 YYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI----GENHCCKV 150
++ + R+ + + + + +++L S+G++HRDL N+L G C ++
Sbjct: 117 FF----------SEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRI 166
Query: 151 ADFGFARDLMTSSVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIV 205
DFGFA+ L R G L ++APE L + DIWS G+L++ ++
Sbjct: 167 CDFGFAKQL-------RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTML 219
Query: 206 TLGSTPY 212
G TP+
Sbjct: 220 A-GYTPF 225
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 105/205 (51%), Gaps = 38/205 (18%)
Query: 24 IVAVKTL--KENAGERERLDLLQELT----VMKTLDPHPNVVRLLGCCTEKEPFFVIMEY 77
+VA+K+L ++ GE E ++ QE +M L+ HPN+V+L G P ++ME+
Sbjct: 46 VVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN-HPNIVKLYGLM--HNPPRMVMEF 102
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRG--IIHRDL 135
VP G L Y+ + K++ + +A G++++ ++ I+HRDL
Sbjct: 103 VPCGDL------------YHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDL 150
Query: 136 AARNVLI---GENH--CCKVADFGFARDLMTSSVYERKSEGRL-PIRWMAPESL--YDNI 187
+ N+ + EN C KVADF ++ + S G L +WMAPE++ +
Sbjct: 151 RSPNIFLQSLDENAPVCAKVADFSLSQQSVHSV------SGLLGNFQWMAPETIGAEEES 204
Query: 188 FSVKSDIWSFGVLIWEIVTLGSTPY 212
++ K+D +SF ++++ I+T G P+
Sbjct: 205 YTEKADTYSFAMILYTILT-GEGPF 228
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 36 ERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL-QSFLRSSRAQR 94
++ + D +E+ ++ HPN++ L + + +++ E + G+L LR Q+
Sbjct: 61 DKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILR----QK 116
Query: 95 YYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI----GENHCCKV 150
++ + R+ + + + + +++L S+G++HRDL N+L G C ++
Sbjct: 117 FF----------SEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRI 166
Query: 151 ADFGFARDLMTSSVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIV 205
DFGFA+ L R G L ++APE L + DIWS G+L++ ++
Sbjct: 167 CDFGFAKQL-------RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTML 219
Query: 206 TLGSTPY 212
G TP+
Sbjct: 220 A-GYTPF 225
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 19/182 (10%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+EL ++K L H NV+ LL T P I ++ + +L ++ NN+ K
Sbjct: 76 RELRLLKHLK-HENVIGLLDVFT---PATSIEDFS-----EVYLVTTLMGADLNNI-VKC 125
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+L+ + YQ+ RG++++ S GIIHRDL NV + E+ ++ DFG AR
Sbjct: 126 QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA---- 181
Query: 164 VYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVM 221
+ + G + RW APE + + + ++ DIWS G ++ E++ G +PG + +
Sbjct: 182 --DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQ-GKALFPGSDYIDQL 238
Query: 222 KK 223
K+
Sbjct: 239 KR 240
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 18/170 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQS-FLRSSRAQRYYNNMHG 101
L+EL ++K H N++ + ++ VPYG+ +S ++ + + +
Sbjct: 102 LRELKILKHFK-HDNIIAIKD---------ILRPTVPYGEFKSVYVVLDLMESDLHQIIH 151
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
S LT + F YQ+ RG++++ S +IHRDL N+L+ EN K+ DFG AR L T
Sbjct: 152 SSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT 211
Query: 162 SSV-YERKSEGRLPIRWM-APE---SLYDNIFSVKSDIWSFGVLIWEIVT 206
S ++ + RW APE SL++ ++ D+WS G + E++
Sbjct: 212 SPAEHQYFMTEYVATRWYRAPELMLSLHE--YTQAIDLWSVGCIFGEMLA 259
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 22/187 (11%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R D+ +E++++K + HPNV+ L K +I E V G+L FL
Sbjct: 58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILIGELVAGGELFDFL----------- 105
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC----CKVADFG 154
+ SLT + T F Q+ G+ +L S I H DL N+++ + + K+ DFG
Sbjct: 106 --AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 155 FARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
A + + E K+ P ++APE + +++D+WS GV+ + I+ G++P+ G
Sbjct: 164 LAHKIDFGN--EFKNIFGTP-EFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLG 219
Query: 215 MAAAEVM 221
E +
Sbjct: 220 DTKQETL 226
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 91/187 (48%), Gaps = 16/187 (8%)
Query: 37 RERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYY 96
+ER + +E+ V+ + HPN+V+ E +++M+Y G L +
Sbjct: 65 KEREESRREVAVLANMK-HPNIVQYRESFEENGSLYIVMDYCEGGDL------------F 111
Query: 97 NNMHGKSNSLTSRD-LTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGF 155
++ + L D + + Q+ ++ + R I+HRD+ ++N+ + ++ ++ DFG
Sbjct: 112 KRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGI 171
Query: 156 ARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGM 215
AR L ++ R G P +++PE + ++ KSDIW+ G +++E+ TL G
Sbjct: 172 ARVLNSTVELARACIG-TPY-YLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS 229
Query: 216 AAAEVMK 222
V+K
Sbjct: 230 MKNLVLK 236
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 25/204 (12%)
Query: 25 VAVKTLKENAGERERLDLL----QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
VAVK L N + LD++ +E+ +K L HP++++L + FF++MEYV
Sbjct: 39 VAVKIL--NRQKIRSLDVVGKIKREIQNLK-LFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G+L ++ HG+ + +R L Q+ + + ++HRDL NV
Sbjct: 96 GELFDYICK----------HGRVEEMEARRLFQ---QILSAVDYCHRHMVVHRDLKPENV 142
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFS-VKSDIWSFGV 199
L+ + K+ADFG + ++M+ + R S G + APE + +++ + DIWS GV
Sbjct: 143 LLDAHMNAKIADFGLS-NMMSDGEFLRDSCG--SPNYAAPEVISGRLYAGPEVDIWSCGV 199
Query: 200 LIWEIVTLGSTPYPGMAAAEVMKK 223
+++ ++ G+ P+ + KK
Sbjct: 200 ILYALLC-GTLPFDDEHVPTLFKK 222
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 18/170 (10%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQS-FLRSSRAQRYYNNMHG 101
L+EL ++K H N++ + ++ VPYG+ +S ++ + + +
Sbjct: 101 LRELKILKHFK-HDNIIAIKD---------ILRPTVPYGEFKSVYVVLDLMESDLHQIIH 150
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
S LT + F YQ+ RG++++ S +IHRDL N+L+ EN K+ DFG AR L T
Sbjct: 151 SSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT 210
Query: 162 SSV-YERKSEGRLPIRWM-APE---SLYDNIFSVKSDIWSFGVLIWEIVT 206
S ++ + RW APE SL++ ++ D+WS G + E++
Sbjct: 211 SPAEHQYFMTEYVATRWYRAPELMLSLHE--YTQAIDLWSVGCIFGEMLA 258
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 25/204 (12%)
Query: 25 VAVKTLKENAGERERLDLL----QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPY 80
VAVK L N + LD++ +E+ +K L HP++++L + FF++MEYV
Sbjct: 39 VAVKIL--NRQKIRSLDVVGKIKREIQNLK-LFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
G+L ++ HG+ + +R L Q+ + + ++HRDL NV
Sbjct: 96 GELFDYICK----------HGRVEEMEARRLFQ---QILSAVDYCHRHMVVHRDLKPENV 142
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFS-VKSDIWSFGV 199
L+ + K+ADFG + ++M+ + R S G + APE + +++ + DIWS GV
Sbjct: 143 LLDAHMNAKIADFGLS-NMMSDGEFLRTSCG--SPNYAAPEVISGRLYAGPEVDIWSCGV 199
Query: 200 LIWEIVTLGSTPYPGMAAAEVMKK 223
+++ ++ G+ P+ + KK
Sbjct: 200 ILYALLC-GTLPFDDEHVPTLFKK 222
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 91/187 (48%), Gaps = 22/187 (11%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R ++ +E+ +++ + HPN++ L K +I+E V G+L FL
Sbjct: 52 REEIEREVNILREI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFL----------- 99
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC----CKVADFG 154
+ SLT + T F Q+ G+ +L S+ I H DL N+++ + + K+ DFG
Sbjct: 100 --AEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157
Query: 155 FARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
A + + E K+ P ++APE + +++D+WS GV+ + I+ G++P+ G
Sbjct: 158 IAHKIEAGN--EFKNIFGTP-EFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLG 213
Query: 215 MAAAEVM 221
E +
Sbjct: 214 ETKQETL 220
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 91/187 (48%), Gaps = 22/187 (11%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R ++ +E+ +++ + HPN++ L K +I+E V G+L FL
Sbjct: 59 REEIEREVNILREI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFL----------- 106
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC----CKVADFG 154
+ SLT + T F Q+ G+ +L S+ I H DL N+++ + + K+ DFG
Sbjct: 107 --AEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFG 164
Query: 155 FARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
A + + E K+ P ++APE + +++D+WS GV+ + I+ G++P+ G
Sbjct: 165 IAHKIEAGN--EFKNIFGTP-EFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLG 220
Query: 215 MAAAEVM 221
E +
Sbjct: 221 ETKQETL 227
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 20/196 (10%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
I+AVK ++ E+E+ LL +L V+ P +V+ G + ++ ME
Sbjct: 49 IMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME------- 101
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRD-LTSFCYQVARGMQFLSSR-GIIHRDLAARNVL 141
L S+ ++Y ++ + + + L + + L IIHRD+ N+L
Sbjct: 102 ---LMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNIL 158
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI----FSVKSDIWSF 197
+ + K+ DFG + L+ S R + R +MAPE + + + V+SD+WS
Sbjct: 159 LDRSGNIKLCDFGISGQLVDSIAKTRDAGCR---PYMAPERIDPSASRQGYDVRSDVWSL 215
Query: 198 GVLIWEIVTLGSTPYP 213
G+ ++E+ T G PYP
Sbjct: 216 GITLYELAT-GRFPYP 230
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 99
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 70 RELRLLKHM-KHENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 116
Query: 100 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR-- 157
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR
Sbjct: 117 -VKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHT 175
Query: 158 -DLMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPG 214
D MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 176 DDEMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPG 225
Query: 215 MAAAEVMK 222
+ +K
Sbjct: 226 TDHIDQLK 233
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 91/187 (48%), Gaps = 22/187 (11%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R ++ +E+ +++ + HPN++ L K +I+E V G+L FL
Sbjct: 73 REEIEREVNILREI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFL----------- 120
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC----CKVADFG 154
+ SLT + T F Q+ G+ +L S+ I H DL N+++ + + K+ DFG
Sbjct: 121 --AEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFG 178
Query: 155 FARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
A + + E K+ P ++APE + +++D+WS GV+ + I+ G++P+ G
Sbjct: 179 IAHKIEAGN--EFKNIFGTP-EFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLG 234
Query: 215 MAAAEVM 221
E +
Sbjct: 235 ETKQETL 241
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 23 CIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGK 82
C V V + ++ + ++ LL+E+ ++K LD HPN+++L +K F+++ E G+
Sbjct: 60 CAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTGGE 118
Query: 83 LQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI 142
L + S + + D QV G+ ++ I+HRDL N+L+
Sbjct: 119 LFDEIISRK-------------RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 165
Query: 143 ---GENHCCKVADFGFARDLMTSSVYERKSEGRL-PIRWMAPESLYDNIFSVKSDIWSFG 198
++ ++ DFG + S +K + ++ ++APE L+ + K D+WS G
Sbjct: 166 ESKSKDANIRIIDFGLSTHFEAS----KKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTG 220
Query: 199 VLIWEIVTLGSTPYPGMAAAEVMKK 223
V+++ I+ G P+ G +++KK
Sbjct: 221 VILY-ILLSGCPPFNGANEYDILKK 244
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 23 CIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGK 82
C V V + ++ + ++ LL+E+ ++K LD HPN+++L +K F+++ E G+
Sbjct: 54 CAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTGGE 112
Query: 83 LQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI 142
L + S + + D QV G+ ++ I+HRDL N+L+
Sbjct: 113 LFDEIISRK-------------RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 159
Query: 143 ---GENHCCKVADFGFARDLMTSSVYERKSEGRLPIR-WMAPESLYDNIFSVKSDIWSFG 198
++ ++ DFG + S +K + ++ ++APE L+ + K D+WS G
Sbjct: 160 ESKSKDANIRIIDFGLSTHFEAS----KKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTG 214
Query: 199 VLIWEIVTLGSTPYPGMAAAEVMKK 223
V+++ I+ G P+ G +++KK
Sbjct: 215 VILY-ILLSGCPPFNGANEYDILKK 238
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 23 CIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGK 82
C V V + ++ + ++ LL+E+ ++K LD HPN+++L +K F+++ E G+
Sbjct: 78 CAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTGGE 136
Query: 83 LQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI 142
L + S + + D QV G+ ++ I+HRDL N+L+
Sbjct: 137 LFDEIISRK-------------RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 183
Query: 143 ---GENHCCKVADFGFARDLMTSSVYERKSEGRLPIR-WMAPESLYDNIFSVKSDIWSFG 198
++ ++ DFG + S +K + ++ ++APE L+ + K D+WS G
Sbjct: 184 ESKSKDANIRIIDFGLSTHFEAS----KKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTG 238
Query: 199 VLIWEIVTLGSTPYPGMAAAEVMKK 223
V+++ I+ G P+ G +++KK
Sbjct: 239 VILY-ILLSGCPPFNGANEYDILKK 262
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 23 CIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGK 82
C V V + ++ + ++ LL+E+ ++K LD HPN+++L +K F+++ E G+
Sbjct: 77 CAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTGGE 135
Query: 83 LQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI 142
L + S + + D QV G+ ++ I+HRDL N+L+
Sbjct: 136 LFDEIISRK-------------RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 182
Query: 143 ---GENHCCKVADFGFARDLMTSSVYERKSEGRLPIR-WMAPESLYDNIFSVKSDIWSFG 198
++ ++ DFG + S +K + ++ ++APE L+ + K D+WS G
Sbjct: 183 ESKSKDANIRIIDFGLSTHFEAS----KKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTG 237
Query: 199 VLIWEIVTLGSTPYPGMAAAEVMKK 223
V+++ I+ G P+ G +++KK
Sbjct: 238 VILY-ILLSGCPPFNGANEYDILKK 261
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 28/188 (14%)
Query: 42 LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL--QSFLRSSRAQRYYNNM 99
LL E+ V+K LD HPN+++L +K ++++ME G+L + LR
Sbjct: 68 LLDEVAVLKQLD-HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR----------- 115
Query: 100 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI---GENHCCKVADFGFA 156
+ D QV G +L I+HRDL N+L+ + K+ DFG +
Sbjct: 116 ----QKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 171
Query: 157 RDLMTSSVYERKSEGRL-PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGM 215
K + RL ++APE L + K D+WS GV+++ I+ G P+ G
Sbjct: 172 AHFEVGG----KMKERLGTAYYIAPEVLRKK-YDEKCDVWSCGVILY-ILLCGYPPFGGQ 225
Query: 216 AAAEVMKK 223
E++K+
Sbjct: 226 TDQEILKR 233
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 19/182 (10%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+EL ++K L H NV+ LL T P I ++ + +L ++ NN+ K
Sbjct: 68 RELRLLKHLK-HENVIGLLDVFT---PATSIEDFS-----EVYLVTTLMGADLNNI-VKC 117
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+L+ + YQ+ RG++++ S GIIHRDL NV + E+ ++ DFG AR
Sbjct: 118 QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA---- 173
Query: 164 VYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVM 221
+ + G + RW APE + + + ++ DIWS G ++ E++ G +PG + +
Sbjct: 174 --DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQ-GKALFPGSDYIDQL 230
Query: 222 KK 223
K+
Sbjct: 231 KR 232
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 107/223 (47%), Gaps = 32/223 (14%)
Query: 6 VEVRKHPMSPERGREGPCIVAVKTLKENAGERERLDLL----QELTVMKTLDPHPNVVRL 61
V+V KH ++ + VAVK L N + LD++ +E+ +K HP++++L
Sbjct: 32 VKVGKHELTGHK-------VAVKIL--NRQKIRSLDVVGKIRREIQNLKLFR-HPHIIKL 81
Query: 62 LGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARG 121
+ F++MEYV G+L ++ K+ L ++ Q+ G
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYI-------------CKNGRLDEKESRRLFQQILSG 128
Query: 122 MQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPE 181
+ + ++HRDL NVL+ + K+ADFG + ++M+ + R S G + APE
Sbjct: 129 VDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS-NMMSDGEFLRXSCGS--PNYAAPE 185
Query: 182 SLYDNIFS-VKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
+ +++ + DIWS GV+++ ++ G+ P+ + KK
Sbjct: 186 VISGRLYAGPEVDIWSSGVILYALLC-GTLPFDDDHVPTLFKK 227
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 28/188 (14%)
Query: 42 LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL--QSFLRSSRAQRYYNNM 99
LL E+ V+K LD HPN+++L +K ++++ME G+L + LR
Sbjct: 51 LLDEVAVLKQLD-HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR----------- 98
Query: 100 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI---GENHCCKVADFGFA 156
+ D QV G +L I+HRDL N+L+ + K+ DFG +
Sbjct: 99 ----QKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 154
Query: 157 RDLMTSSVYERKSEGRLPIR-WMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGM 215
K + RL ++APE L + K D+WS GV+++ I+ G P+ G
Sbjct: 155 AHFEVGG----KMKERLGTAYYIAPEVLRKK-YDEKCDVWSCGVILY-ILLCGYPPFGGQ 208
Query: 216 AAAEVMKK 223
E++K+
Sbjct: 209 TDQEILKR 216
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 106/209 (50%), Gaps = 21/209 (10%)
Query: 17 RGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R ++ IVA+K L ++ E+E ++ L +E+ + L HPN++RL ++ ++I
Sbjct: 43 REKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH-HPNILRLYNYFYDRRRIYLI 101
Query: 75 MEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRD 134
+EY P G+L L+ KS + + + ++A + + + +IHRD
Sbjct: 102 LEYAPRGELYKELQ-------------KSCTFDEQRTATIMEELADALMYCHGKKVIHRD 148
Query: 135 LAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
+ N+L+G K+ADFG++ + S+ + G L ++ PE + + + K D+
Sbjct: 149 IKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTL--DYLPPEMIEGRMHNEKVDL 204
Query: 195 WSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
W GVL +E++ +G+ P+ + E ++
Sbjct: 205 WCIGVLCYELL-VGNPPFESASHNETYRR 232
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD 182
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 183 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 232
Query: 217 AAEVMK 222
+ +K
Sbjct: 233 HIDQLK 238
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 99
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 75 RELRLLKHM-KHENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 121
Query: 100 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR-- 157
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR
Sbjct: 122 -VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHT 180
Query: 158 -DLMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPG 214
D MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 181 DDEMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPG 230
Query: 215 MAAAEVMK 222
+ +K
Sbjct: 231 TDHIDQLK 238
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 99
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 76 RELRLLKHM-KHENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 122
Query: 100 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR-- 157
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR
Sbjct: 123 -VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHT 181
Query: 158 -DLMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPG 214
D MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 182 DDEMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPG 231
Query: 215 MAAAEVMK 222
+ +K
Sbjct: 232 TDHIDQLK 239
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
KS LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG R D
Sbjct: 118 KSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDD 177
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 178 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 227
Query: 217 AAEVMK 222
+ +K
Sbjct: 228 HIDQLK 233
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 129 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD 188
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 189 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 238
Query: 217 AAEVMK 222
+ +K
Sbjct: 239 HIDQLK 244
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 15/169 (8%)
Query: 55 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 114
HP+++ L + ++++E G++ +L++ R + + N + F
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN-RVKPFSEN-----------EARHF 117
Query: 115 CYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLP 174
+Q+ GM +L S GI+HRDL N+L+ N K+ADFG A L +E+
Sbjct: 118 MHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP--HEKHYTLCGT 175
Query: 175 IRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
+++PE + ++SD+WS G + + ++ +G P+ + K
Sbjct: 176 PNYISPEIATRSAHGLESDVWSLGCMFYTLL-IGRPPFDTDTVKNTLNK 223
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD 179
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 180 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 229
Query: 217 AAEVMK 222
+ +K
Sbjct: 230 HIDQLK 235
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 178 EMT---------GYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 227
Query: 217 AAEVMK 222
+ +K
Sbjct: 228 HIDQLK 233
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 20/200 (10%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
+VA+K ++ E ++E++++K L H N+V L ++ ++ EY+
Sbjct: 29 LVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTLVFEYL----- 82
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
++Y ++ N + ++ F +Q+ RG+ + + ++HRDL +N+LI
Sbjct: 83 -----DKDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLIN 134
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPES--LYDNIFSVKSDIWSFGVLI 201
E K+ADFG AR S+ + + + W P L +S + D+W G +
Sbjct: 135 ERGELKLADFGLAR---AKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIF 191
Query: 202 WEIVTLGSTPYPGMAAAEVM 221
+E+ T G +PG E +
Sbjct: 192 YEMAT-GRPLFPGSTVEEQL 210
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 95/194 (48%), Gaps = 28/194 (14%)
Query: 36 ERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRY 95
E+ ++ E++++K+LD HPN+++L +K+ F+++ E+ G+L +
Sbjct: 87 EKFHEEIYNEISLLKSLD-HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQII------- 138
Query: 96 YNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC---CKVAD 152
N H D + Q+ G+ +L I+HRD+ N+L+ + K+ D
Sbjct: 139 --NRH----KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVD 192
Query: 153 FGFARDLMTSSVYER--KSEGRL-PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGS 209
FG SS + + K RL ++APE L ++ K D+WS GV+++ I+ G
Sbjct: 193 FGL------SSFFSKDYKLRDRLGTAYYIAPEVLKKK-YNEKCDVWSCGVIMY-ILLCGY 244
Query: 210 TPYPGMAAAEVMKK 223
P+ G +++KK
Sbjct: 245 PPFGGQNDQDIIKK 258
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 22/200 (11%)
Query: 16 ERGREGPC--IVAVKTLKENAGERERLDLLQELTV-MKTLDPHPNVVRLLGCCTEKEPFF 72
E+ R P I+AVK ++ +E+ LL +L + M+T+D P V G + +
Sbjct: 68 EKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVD-CPFTVTFYGALFREGDVW 126
Query: 73 VIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR-GII 131
+ ME L + ++Y + K ++ L + + ++ L S+ +I
Sbjct: 127 ICME----------LMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVI 176
Query: 132 HRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI---- 187
HRD+ NVLI K+ DFG + + SV + G P +MAPE + +
Sbjct: 177 HRDVKPSNVLINALGQVKMCDFGIS-GYLVDSVAKTIDAGCKP--YMAPERINPELNQKG 233
Query: 188 FSVKSDIWSFGVLIWEIVTL 207
+SVKSDIWS G+ + E+ L
Sbjct: 234 YSVKSDIWSLGITMIELAIL 253
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L H N+V+L K+ ++ E++ ++ + G
Sbjct: 48 IREISILKELK-HSNIVKLYDVIHTKKRLVLVFEHL----------DQDLKKLLDVCEGG 96
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
S+T++ SF Q+ G+ + R ++HRDL +N+LI K+ADFG AR
Sbjct: 97 LESVTAK---SFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF--- 150
Query: 163 SVYERKSEGRLPIRWM-APESLY-DNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEV 220
+ RK + W AP+ L +S DIWS G + E+V G+ +PG++ A+
Sbjct: 151 GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN-GTPLFPGVSEADQ 209
Query: 221 M 221
+
Sbjct: 210 L 210
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 98/205 (47%), Gaps = 24/205 (11%)
Query: 23 CIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGK 82
C V V + ++ + ++ LL+E+ ++K LD HPN+ +L +K F+++ E G+
Sbjct: 54 CAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIXKLYEFFEDKGYFYLVGEVYTGGE 112
Query: 83 LQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI 142
L + S + + D QV G+ + I+HRDL N+L+
Sbjct: 113 LFDEIISRK-------------RFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLL 159
Query: 143 ---GENHCCKVADFGFARDLMTSSVYERKSEGRLPIR-WMAPESLYDNIFSVKSDIWSFG 198
++ ++ DFG + S +K + ++ ++APE L+ + K D+WS G
Sbjct: 160 ESKSKDANIRIIDFGLSTHFEAS----KKXKDKIGTAYYIAPEVLH-GTYDEKCDVWSTG 214
Query: 199 VLIWEIVTLGSTPYPGMAAAEVMKK 223
V+++ I+ G P+ G +++KK
Sbjct: 215 VILY-ILLSGCPPFNGANEYDILKK 238
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 118 KXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 178 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 227
Query: 217 AAEVMK 222
+ +K
Sbjct: 228 HIDQLK 233
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 91/188 (48%), Gaps = 19/188 (10%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
V K++ ++E++ E+ + K+LD +P+VV G + + +V++E
Sbjct: 74 VVPKSMLLKPHQKEKMS--TEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEIC------ 124
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+R +H + ++T + F Q +G+Q+L + +IHRDL N+ + +
Sbjct: 125 -------RRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND 177
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG A + ERK + ++APE L S + DIWS G +++ +
Sbjct: 178 DMDVKIGDFGLATKIEFDG--ERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL 235
Query: 205 VTLGSTPY 212
+ +G P+
Sbjct: 236 L-VGKPPF 242
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L H N+V+L K+ ++ E++ ++ + G
Sbjct: 48 IREISILKELK-HSNIVKLYDVIHTKKRLVLVFEHL----------DQDLKKLLDVCEGG 96
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
S+T++ SF Q+ G+ + R ++HRDL +N+LI K+ADFG AR
Sbjct: 97 LESVTAK---SFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF--- 150
Query: 163 SVYERKSEGRLPIRWM-APESLY-DNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEV 220
+ RK + W AP+ L +S DIWS G + E+V G+ +PG++ A+
Sbjct: 151 GIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN-GTPLFPGVSEADQ 209
Query: 221 M 221
+
Sbjct: 210 L 210
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 93/187 (49%), Gaps = 22/187 (11%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R ++ +E+++++ + HPN++ L + +I+E V G+L FL
Sbjct: 59 REEIEREVSILRQV-LHPNIITLHDVYENRTDVVLILELVSGGELFDFL----------- 106
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC----CKVADFG 154
+ SL+ + TSF Q+ G+ +L ++ I H DL N+++ + + K+ DFG
Sbjct: 107 --AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164
Query: 155 FARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
A ++ E K+ P ++APE + +++D+WS GV+ + I+ G++P+ G
Sbjct: 165 LAHEIEDG--VEFKNIFGTP-EFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLG 220
Query: 215 MAAAEVM 221
E +
Sbjct: 221 DTKQETL 227
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 87/180 (48%), Gaps = 33/180 (18%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 99
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 99 RELRLLKHMK-HENVIGLLDVFT------------PATSLEEFNDVYLVTHLMGADLNNI 145
Query: 100 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR-- 157
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR
Sbjct: 146 -VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 204
Query: 158 -DLMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPG 214
D MT G + RW APE + + + +++ DIWS G ++ E++T G T +PG
Sbjct: 205 DDEMT---------GYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLT-GRTLFPG 254
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 91/188 (48%), Gaps = 19/188 (10%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
V K++ ++E++ E+ + K+LD +P+VV G + + +V++E
Sbjct: 58 VVPKSMLLKPHQKEKMS--TEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEIC------ 108
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+R +H + ++T + F Q +G+Q+L + +IHRDL N+ + +
Sbjct: 109 -------RRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND 161
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG A + ERK + ++APE L S + DIWS G +++ +
Sbjct: 162 DMDVKIGDFGLATKIEFDG--ERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL 219
Query: 205 VTLGSTPY 212
+ +G P+
Sbjct: 220 L-VGKPPF 226
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 26/192 (13%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E+T +K + HPN+V+L ++ F++ME + G+L F R + + +
Sbjct: 54 KEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL--FERIKKKKHF-------- 103
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI---GENHCCKVADFGFARDLM 160
+ + + ++ + + G++HRDL N+L +N K+ DFGFAR +
Sbjct: 104 ---SETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFAR--L 158
Query: 161 TSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG------ 214
+ + + APE L N + D+WS GV+++ +++ G P+
Sbjct: 159 KPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLS-GQVPFQSHDRSLT 217
Query: 215 -MAAAEVMKKSK 225
+A E+MKK K
Sbjct: 218 CTSAVEIMKKIK 229
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 20/181 (11%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
++E++++K L H N+V+L K+ ++ E++ ++ + G
Sbjct: 48 IREISILKELK-HSNIVKLYDVIHTKKRLVLVFEHL----------DQDLKKLLDVCEGG 96
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
S+T++ SF Q+ G+ + R ++HRDL +N+LI K+ADFG AR
Sbjct: 97 LESVTAK---SFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF--- 150
Query: 163 SVYERKSEGRLPIRWM-APESLY-DNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEV 220
+ RK + W AP+ L +S DIWS G + E+V G+ +PG++ A+
Sbjct: 151 GIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN-GAPLFPGVSEADQ 209
Query: 221 M 221
+
Sbjct: 210 L 210
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 24 IVAVKTLK-ENAGERERLDLLQELTVMKTLDP--HPNVVRLLGCCTEKEPFFVIMEYVPY 80
VA+K+++ N E + ++E+ +++ L+ HPNVVRL+ C I + +
Sbjct: 31 FVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVF 90
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
+ LR+ Y + L + + Q RG+ FL + I+HRDL N+
Sbjct: 91 EHVDQDLRT-----YLDK--APPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENI 143
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWM-APESLYDNIFSVKSDIWSFGV 199
L+ K+ADFG AR Y+ + + W APE L + ++ D+WS G
Sbjct: 144 LVTSGGTVKLADFGLAR----IYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGC 199
Query: 200 LIWEI 204
+ E+
Sbjct: 200 IFAEM 204
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 178 EMT---------GXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 227
Query: 217 AAEVMK 222
+ +K
Sbjct: 228 HIDQLK 233
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 183
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 184 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 233
Query: 217 AAEVMK 222
+ +K
Sbjct: 234 HIDQLK 239
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 183
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 184 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 233
Query: 217 AAEVMK 222
+ +K
Sbjct: 234 HIDQLK 239
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 183
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 184 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 233
Query: 217 AAEVMK 222
+ +K
Sbjct: 234 HIDQLK 239
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 99
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 70 RELRLLKHM-KHENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 116
Query: 100 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR-- 157
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR
Sbjct: 117 -VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 158 -DLMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPG 214
D MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 176 DDEMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPG 225
Query: 215 MAAAEVMK 222
+ +K
Sbjct: 226 TDHIDQLK 233
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 9/123 (7%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-- 195
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAE 219
+ + G + RW APE + + + ++ DIWS G ++ E++T G T +PG +
Sbjct: 196 ----DDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHID 250
Query: 220 VMK 222
+K
Sbjct: 251 QLK 253
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 178 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 227
Query: 217 AAEVMK 222
+ +K
Sbjct: 228 HIDQLK 233
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 178 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 227
Query: 217 AAEVMK 222
+ +K
Sbjct: 228 HIDQLK 233
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 184
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 185 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 234
Query: 217 AAEVMK 222
+ +K
Sbjct: 235 HIDQLK 240
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 182
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 183 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 232
Query: 217 AAEVMK 222
+ +K
Sbjct: 233 HIDQLK 238
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 179
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 180 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 229
Query: 217 AAEVMK 222
+ +K
Sbjct: 230 HIDQLK 235
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 178 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 227
Query: 217 AAEVMK 222
+ +K
Sbjct: 228 HIDQLK 233
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 117 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 176
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 177 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 226
Query: 217 AAEVMK 222
+ +K
Sbjct: 227 HIDQLK 232
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 185 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 234
Query: 217 AAEVMK 222
+ +K
Sbjct: 235 HIDQLK 240
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 99
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 70 RELRLLKHM-KHENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 116
Query: 100 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR-- 157
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR
Sbjct: 117 -VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 158 -DLMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPG 214
D MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 176 DDEMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPG 225
Query: 215 MAAAEVMK 222
+ +K
Sbjct: 226 TDHIDQLK 233
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 129 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 188
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 189 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 238
Query: 217 AAEVMK 222
+ +K
Sbjct: 239 HIDQLK 244
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 179
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 180 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 229
Query: 217 AAEVMK 222
+ +K
Sbjct: 230 HIDQLK 235
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 178 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 227
Query: 217 AAEVMK 222
+ +K
Sbjct: 228 HIDQLK 233
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 179
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 180 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 229
Query: 217 AAEVMK 222
+ +K
Sbjct: 230 HIDQLK 235
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 185 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 234
Query: 217 AAEVMK 222
+ +K
Sbjct: 235 HIDQLK 240
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 178 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 227
Query: 217 AAEVMK 222
+ +K
Sbjct: 228 HIDQLK 233
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 197
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 198 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 247
Query: 217 AAEVMK 222
+ +K
Sbjct: 248 HIDQLK 253
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 141 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 200
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 201 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 250
Query: 217 AAEVMK 222
+ +K
Sbjct: 251 HIDQLK 256
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 185 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 234
Query: 217 AAEVMK 222
+ +K
Sbjct: 235 HIDQLK 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 137 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 196
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 197 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 246
Query: 217 AAEVMK 222
+ +K
Sbjct: 247 HIDQLK 252
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 197
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 198 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 247
Query: 217 AAEVMK 222
+ +K
Sbjct: 248 HIDQLK 253
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 137 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 196
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 197 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 246
Query: 217 AAEVMK 222
+ +K
Sbjct: 247 HIDQLK 252
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 128 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 187
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 188 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 237
Query: 217 AAEVMK 222
+ +K
Sbjct: 238 HIDQLK 243
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 189
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 190 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 239
Query: 217 AAEVMK 222
+ +K
Sbjct: 240 HIDQLK 245
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 189
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 190 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 239
Query: 217 AAEVMK 222
+ +K
Sbjct: 240 HIDQLK 245
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 189
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 190 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 239
Query: 217 AAEVMK 222
+ +K
Sbjct: 240 HIDQLK 245
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 182
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 183 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 232
Query: 217 AAEVMK 222
+ +K
Sbjct: 233 HIDQLK 238
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 115 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 174
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 175 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 224
Query: 217 AAEVMK 222
+ +K
Sbjct: 225 HIDQLK 230
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 178 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 227
Query: 217 AAEVMK 222
+ +K
Sbjct: 228 HIDQLK 233
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 174 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 223
Query: 217 AAEVMK 222
+ +K
Sbjct: 224 HIDQLK 229
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 115 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 174
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 175 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 224
Query: 217 AAEVMK 222
+ +K
Sbjct: 225 HIDQLK 230
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 116 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 175
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 176 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 225
Query: 217 AAEVMK 222
+ +K
Sbjct: 226 HIDQLK 231
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 174 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 223
Query: 217 AAEVMK 222
+ +K
Sbjct: 224 HIDQLK 229
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 9/123 (7%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR
Sbjct: 141 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-- 198
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAE 219
+ + G + RW APE + + + ++ DIWS G ++ E++T G T +PG +
Sbjct: 199 ----DDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHID 253
Query: 220 VMK 222
+K
Sbjct: 254 QLK 256
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 13/184 (7%)
Query: 24 IVAVKTLK-ENAGERERLDLLQELTVMKTLDP--HPNVVRLLGCCTEKEPFFVIMEYVPY 80
VA+K+++ N E + ++E+ +++ L+ HPNVVRL+ C I + +
Sbjct: 31 FVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVF 90
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
+ LR+ Y + L + + Q RG+ FL + I+HRDL N+
Sbjct: 91 EHVDQDLRT-----YLDK--APPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENI 143
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
L+ K+ADFG AR S + + + + APE L + ++ D+WS G +
Sbjct: 144 LVTSGGTVKLADFGLAR---IYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCI 200
Query: 201 IWEI 204
E+
Sbjct: 201 FAEM 204
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 19/188 (10%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
V K++ ++E++ E+ + K+LD +P+VV G + + +V++E
Sbjct: 74 VVPKSMLLKPHQKEKMS--TEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEIC------ 124
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+R +H + ++T + F Q +G+Q+L + +IHRDL N+ + +
Sbjct: 125 -------RRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND 177
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG A + ERK ++APE L S + DIWS G +++ +
Sbjct: 178 DMDVKIGDFGLATKIEFDG--ERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL 235
Query: 205 VTLGSTPY 212
+ +G P+
Sbjct: 236 L-VGKPPF 242
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 19/188 (10%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
V K++ ++E++ E+ + K+LD +P+VV G + + +V++E
Sbjct: 74 VVPKSMLLKPHQKEKMS--TEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEIC------ 124
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+R +H + ++T + F Q +G+Q+L + +IHRDL N+ + +
Sbjct: 125 -------RRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND 177
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG A + ERK ++APE L S + DIWS G +++ +
Sbjct: 178 DMDVKIGDFGLATKIEFDG--ERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL 235
Query: 205 VTLGSTPY 212
+ +G P+
Sbjct: 236 L-VGKPPF 242
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 27/185 (14%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 99
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 70 RELRLLKHM-KHENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 116
Query: 100 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL 159
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR
Sbjct: 117 -VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 160 MTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
+ + G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 176 ------DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDH 228
Query: 218 AEVMK 222
+ +K
Sbjct: 229 IDQLK 233
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 27/185 (14%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 99
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 70 RELRLLKHM-KHENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 116
Query: 100 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL 159
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR
Sbjct: 117 -VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 160 MTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
+ + G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 176 ------DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDH 228
Query: 218 AEVMK 222
+ +K
Sbjct: 229 IDQLK 233
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 22/200 (11%)
Query: 16 ERGREGPC--IVAVKTLKENAGERERLDLLQELTV-MKTLDPHPNVVRLLGCCTEKEPFF 72
E+ R P I+AVK ++ +E+ LL +L + M+T+D P V G + +
Sbjct: 24 EKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVD-CPFTVTFYGALFREGDVW 82
Query: 73 VIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR-GII 131
+ ME L + ++Y + K ++ L + + ++ L S+ +I
Sbjct: 83 ICME----------LMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVI 132
Query: 132 HRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI---- 187
HRD+ NVLI K+ DFG + + V + G P +MAPE + +
Sbjct: 133 HRDVKPSNVLINALGQVKMCDFGIS-GYLVDDVAKDIDAGCKP--YMAPERINPELNQKG 189
Query: 188 FSVKSDIWSFGVLIWEIVTL 207
+SVKSDIWS G+ + E+ L
Sbjct: 190 YSVKSDIWSLGITMIELAIL 209
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 9/123 (7%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-- 171
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAE 219
+ + G + RW APE + + + ++ DIWS G ++ E++T G T +PG +
Sbjct: 172 ----DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHID 226
Query: 220 VMK 222
+K
Sbjct: 227 QLK 229
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 13/199 (6%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
VA+K +K ++ E ++E+++MK L H N+VRL + ++ E++ L+
Sbjct: 33 VALKEVKLDSEEGTPSTAIREISLMKELK-HENIVRLYDVIHTENKLTLVFEFMD-NDLK 90
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
++ S N G +L + F +Q+ +G+ F I+HRDL +N+LI +
Sbjct: 91 KYMDSRTVG---NTPRGLELNL----VKYFQWQLLQGLAFCHENKILHRDLKPQNLLINK 143
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDN-IFSVKSDIWSFGVLIWE 203
K+ DFG AR V SE + + + AP+ L + +S DIWS G ++ E
Sbjct: 144 RGQLKLGDFGLARAFGI-PVNTFSSE-VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAE 201
Query: 204 IVTLGSTPYPGMAAAEVMK 222
++T G +PG E +K
Sbjct: 202 MIT-GKPLFPGTNDEEQLK 219
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 16/167 (9%)
Query: 56 PNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 115
P + +L C + + +MEYV G L ++ + +
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-------------QVGRFKEPHAVFYA 127
Query: 116 YQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPI 175
++A G+ FL S+GII+RDL NV++ K+ADFG ++ + V + G
Sbjct: 128 AEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGT--P 185
Query: 176 RWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMK 222
++APE + + D W+FGVL++E++ G P+ G E+ +
Sbjct: 186 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA-GQAPFEGEDEDELFQ 231
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DFG AR D
Sbjct: 114 KCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 174 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 223
Query: 217 AAEVMK 222
+ +K
Sbjct: 224 HIDQLK 229
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 15/193 (7%)
Query: 17 RGREGPCIVAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFV 73
+G VAVK L + E + QE+ V H N+V LLG ++ + +
Sbjct: 40 KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQ-HENLVELLGFSSDGDDLCL 98
Query: 74 IMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHR 133
+ Y P G L L + G + L+ A G+ FL IHR
Sbjct: 99 VYVYXPNGSLLDRLSC---------LDG-TPPLSWHXRCKIAQGAANGINFLHENHHIHR 148
Query: 134 DLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSD 193
D+ + N+L+ E K++DFG AR + S + APE+L I + KSD
Sbjct: 149 DIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGEI-TPKSD 207
Query: 194 IWSFGVLIWEIVT 206
I+SFGV++ EI+T
Sbjct: 208 IYSFGVVLLEIIT 220
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 24 IVAVKTLKENAGERERL--DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
IVA+K ++ +A E E + ++E++++K L HPN+V L+ + ++ E++
Sbjct: 47 IVALKRIRLDA-EDEGIPSTAIREISLLKELH-HPNIVSLIDVIHSERCLTLVFEFME-K 103
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L+ L ++ L + + YQ+ RG+ I+HRDL +N+L
Sbjct: 104 DLKKVLDENKT------------GLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLL 151
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWM-APESLY-DNIFSVKSDIWSFGV 199
I + K+ADFG AR + R + W AP+ L +S DIWS G
Sbjct: 152 INSDGALKLADFGLARAF---GIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGC 208
Query: 200 LIWEIVTLGSTPYPGMAAAEVMKK 223
+ E++T G +PG+ + + K
Sbjct: 209 IFAEMIT-GKPLFPGVTDDDQLPK 231
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 24 IVAVKTLKENAGERERL--DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
IVA+K ++ +A E E + ++E++++K L HPN+V L+ + ++ E++
Sbjct: 47 IVALKRIRLDA-EDEGIPSTAIREISLLKELH-HPNIVSLIDVIHSERCLTLVFEFME-K 103
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L+ L ++ L + + YQ+ RG+ I+HRDL +N+L
Sbjct: 104 DLKKVLDENKT------------GLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLL 151
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWM-APESLY-DNIFSVKSDIWSFGV 199
I + K+ADFG AR + R + W AP+ L +S DIWS G
Sbjct: 152 INSDGALKLADFGLARAF---GIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGC 208
Query: 200 LIWEIVTLGSTPYPGMAAAEVMKK 223
+ E++T G +PG+ + + K
Sbjct: 209 IFAEMIT-GKPLFPGVTDDDQLPK 231
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 56 PNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 115
P + +L C + + +MEYV G L Y+ G+ +
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLM----------YHIQQVGR---FKEPHAVFYA 448
Query: 116 YQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPI 175
++A G+ FL S+GII+RDL NV++ K+ADFG ++ + V + G
Sbjct: 449 AEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGT--P 506
Query: 176 RWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMK 222
++APE + + D W+FGVL++E++ G P+ G E+ +
Sbjct: 507 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA-GQAPFEGEDEDELFQ 552
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 37/182 (20%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIMEYVPYGKLQSFLRSSRAQRYYN 97
+EL +MK ++ H N++ LL T E + +++ME + Q +R
Sbjct: 72 RELVLMKVVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER--- 127
Query: 98 NMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR 157
++ YQ+ G++ L S GIIHRDL N+++ + K+ DFG AR
Sbjct: 128 -------------MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 158 D-----LMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
+MT V R + APE + + DIWS GV++ E++ G +
Sbjct: 175 TAGTSFMMTPYVVTR--------YYRAPEVILGMGYKENVDIWSVGVIMGEMIK-GGVLF 225
Query: 213 PG 214
PG
Sbjct: 226 PG 227
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ D+G AR D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDD 177
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 178 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 227
Query: 217 AAEVMK 222
+ +K
Sbjct: 228 HIDQLK 233
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 94/195 (48%), Gaps = 23/195 (11%)
Query: 17 RGREGPCIVAVKTLK----ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFF 72
R + IVA+K +K A + L+E+ +++ L HPN++ LL K
Sbjct: 30 RDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNIIGLLDAFGHKSNIS 88
Query: 73 VIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIH 132
++ +++ L+ ++ + S LT + ++ +G+++L I+H
Sbjct: 89 LVFDFMET-DLEVIIKDN------------SLVLTPSHIKAYMLMTLQGLEYLHQHWILH 135
Query: 133 RDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWM-APESLYD-NIFSV 190
RDL N+L+ EN K+ADFG A+ + + R ++ RW APE L+ ++ V
Sbjct: 136 RDLKPNNLLLDENGVLKLADFGLAKSFGSPN---RAYXHQVVTRWYRAPELLFGARMYGV 192
Query: 191 KSDIWSFGVLIWEIV 205
D+W+ G ++ E++
Sbjct: 193 GVDMWAVGCILAELL 207
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 24 IVAVKTLK-ENAGERERLDLLQELTVMKTLDP--HPNVVRLLGCCTEKEPFFVIMEYVPY 80
VA+K+++ N E + ++E+ +++ L+ HPNVVRL+ C I + +
Sbjct: 31 FVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVF 90
Query: 81 GKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
+ LR+ Y + L + + Q RG+ FL + I+HRDL N+
Sbjct: 91 EHVDQDLRT-----YLDK--APPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENI 143
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIR----WMAPESLYDNIFSVKSDIWS 196
L+ K+ADFG AR +Y + P+ + APE L + ++ D+WS
Sbjct: 144 LVTSGGTVKLADFGLAR------IYSYQM-ALFPVVVTLWYRAPEVLLQSTYATPVDMWS 196
Query: 197 FGVLIWEI 204
G + E+
Sbjct: 197 VGCIFAEM 204
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 37/182 (20%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIMEYVPYGKLQSFLRSSRAQRYYN 97
+EL +MK ++ H N++ LL T E + +++ME + Q +R
Sbjct: 72 RELVLMKVVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER--- 127
Query: 98 NMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR 157
++ YQ+ G++ L S GIIHRDL N+++ + K+ DFG AR
Sbjct: 128 -------------MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 158 D-----LMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
+MT V R + APE + + DIWS GV++ E++ G +
Sbjct: 175 TAGTSFMMTPYVVTR--------YYRAPEVILGMGYKENVDIWSVGVIMGEMIK-GGVLF 225
Query: 213 PG 214
PG
Sbjct: 226 PG 227
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 23/202 (11%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
R R+ ++AVK ++ + + E +L +L V+ P +V+ G F+ ME
Sbjct: 45 RFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME 104
Query: 77 YVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR-GIIHRDL 135
L + A++ M G + R L + + + +L + G+IHRD+
Sbjct: 105 ----------LMGTCAEKLKKRMQG---PIPERILGKMTVAIVKALYYLKEKHGVIHRDV 151
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESL-----YDNIFSV 190
N+L+ E K+ DFG + L+ +R + +MAPE + + +
Sbjct: 152 KPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGC---AAYMAPERIDPPDPTKPDYDI 208
Query: 191 KSDIWSFGVLIWEIVTLGSTPY 212
++D+WS G+ + E+ T G PY
Sbjct: 209 RADVWSLGISLVELAT-GQFPY 229
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 25/187 (13%)
Query: 24 IVAVKTLKENAGERER--LDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
+VA+K + + + D+++E+ ++ L HPN ++ GC + +++MEY G
Sbjct: 81 VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWLVMEYC-LG 138
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L +H K L ++ + + +G+ +L S +IHRD+ A N+L
Sbjct: 139 SASDLLE----------VHKKP--LQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNIL 186
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPE---SLYDNIFSVKSDIWSFG 198
+ E K+ DFG A + ++ + WMAPE ++ + + K D+WS G
Sbjct: 187 LSEPGLVKLGDFGSASIMAPANXFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLG 240
Query: 199 VLIWEIV 205
+ E+
Sbjct: 241 ITCIELA 247
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 55 HPNVVRLLGCCTEKEPF----FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRD 110
HP +V + + P +++MEYV L+ + + +T +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-------------GPMTPKR 117
Query: 111 LTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSE 170
+ + F GIIHRD+ N+LI + KV DFG AR + S ++
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTA 177
Query: 171 GRL-PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
+ ++++PE + +SD++S G +++E++T G P+ G
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTG 221
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 87/188 (46%), Gaps = 16/188 (8%)
Query: 23 CIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGK 82
+VAVK LKE + L E+ M ++ H N++RL G C ++ Y+ G
Sbjct: 63 TLVAVKRLKEERXQGGELQFQTEVE-MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGS 121
Query: 83 LQSFLRSS-RAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR---GIIHRDLAAR 138
+ S LR +Q + + +L S ARG+ +L IIHRD+ A
Sbjct: 122 VASCLRERPESQPPLDWPKRQRIALGS----------ARGLAYLHDHCDPKIIHRDVKAA 171
Query: 139 NVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFG 198
N+L+ E V DFG A+ LM R I +APE L S K+D++ +G
Sbjct: 172 NILLDEEFEAVVGDFGLAK-LMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYG 230
Query: 199 VLIWEIVT 206
V++ E++T
Sbjct: 231 VMLLELIT 238
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 16/187 (8%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
+VAVK LKE + L E+ M ++ H N++RL G C ++ Y+ G +
Sbjct: 56 LVAVKRLKEERTQGGELQFQTEVE-MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 114
Query: 84 QSFLRSS-RAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR---GIIHRDLAARN 139
S LR +Q + + +L S ARG+ +L IIHRD+ A N
Sbjct: 115 ASCLRERPESQPPLDWPKRQRIALGS----------ARGLAYLHDHCDPKIIHRDVKAAN 164
Query: 140 VLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGV 199
+L+ E V DFG A+ LM R I +APE L S K+D++ +GV
Sbjct: 165 ILLDEEFEAVVGDFGLAK-LMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGV 223
Query: 200 LIWEIVT 206
++ E++T
Sbjct: 224 MLLELIT 230
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 92/187 (49%), Gaps = 22/187 (11%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R ++ +E+++++ + H NV+ L + +I+E V G+L FL
Sbjct: 59 REEIEREVSILRQV-LHHNVITLHDVYENRTDVVLILELVSGGELFDFL----------- 106
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC----CKVADFG 154
+ SL+ + TSF Q+ G+ +L ++ I H DL N+++ + + K+ DFG
Sbjct: 107 --AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164
Query: 155 FARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
A ++ E K+ P ++APE + +++D+WS GV+ + I+ G++P+ G
Sbjct: 165 LAHEIEDG--VEFKNIFGTP-EFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLG 220
Query: 215 MAAAEVM 221
E +
Sbjct: 221 DTKQETL 227
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 55 HPNVVRLLGCCTEKEPF----FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRD 110
HP +V + + P +++MEYV L+ + + +T +
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-------------GPMTPKR 117
Query: 111 LTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSE 170
+ + F GIIHRD+ N++I + KV DFG AR + S ++
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 171 GRL-PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
+ ++++PE + +SD++S G +++E++T G P+ G
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTG 221
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 25/186 (13%)
Query: 24 IVAVKTLKENAGERER--LDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
+VA+K + + + D+++E+ ++ L HPN ++ GC + +++MEY G
Sbjct: 42 VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWLVMEYC-LG 99
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L +H K L ++ + + +G+ +L S +IHRD+ A N+L
Sbjct: 100 SASDLLE----------VHKKP--LQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNIL 147
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPE---SLYDNIFSVKSDIWSFG 198
+ E K+ DFG A + ++ + WMAPE ++ + + K D+WS G
Sbjct: 148 LSEPGLVKLGDFGSASIMAPANXFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLG 201
Query: 199 VLIWEI 204
+ E+
Sbjct: 202 ITCIEL 207
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 92/187 (49%), Gaps = 22/187 (11%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R ++ +E+++++ + H NV+ L + +I+E V G+L FL
Sbjct: 59 REEIEREVSILRQV-LHHNVITLHDVYENRTDVVLILELVSGGELFDFL----------- 106
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC----CKVADFG 154
+ SL+ + TSF Q+ G+ +L ++ I H DL N+++ + + K+ DFG
Sbjct: 107 --AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164
Query: 155 FARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
A ++ E K+ P ++APE + +++D+WS GV+ + I+ G++P+ G
Sbjct: 165 LAHEIEDG--VEFKNIFGTP-EFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLG 220
Query: 215 MAAAEVM 221
E +
Sbjct: 221 DTKQETL 227
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 92/187 (49%), Gaps = 22/187 (11%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R ++ +E+++++ + H NV+ L + +I+E V G+L FL
Sbjct: 59 REEIEREVSILRQV-LHHNVITLHDVYENRTDVVLILELVSGGELFDFL----------- 106
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC----CKVADFG 154
+ SL+ + TSF Q+ G+ +L ++ I H DL N+++ + + K+ DFG
Sbjct: 107 --AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164
Query: 155 FARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
A ++ E K+ P ++APE + +++D+WS GV+ + I+ G++P+ G
Sbjct: 165 LAHEIEDG--VEFKNIFGTP-EFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLG 220
Query: 215 MAAAEVM 221
E +
Sbjct: 221 DTKQETL 227
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 92/187 (49%), Gaps = 22/187 (11%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R ++ +E+++++ + H NV+ L + +I+E V G+L FL
Sbjct: 59 REEIEREVSILRQV-LHHNVITLHDVYENRTDVVLILELVSGGELFDFL----------- 106
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC----CKVADFG 154
+ SL+ + TSF Q+ G+ +L ++ I H DL N+++ + + K+ DFG
Sbjct: 107 --AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164
Query: 155 FARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
A ++ E K+ P ++APE + +++D+WS GV+ + I+ G++P+ G
Sbjct: 165 LAHEIEDG--VEFKNIFGTP-EFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLG 220
Query: 215 MAAAEVM 221
E +
Sbjct: 221 DTKQETL 227
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 92/187 (49%), Gaps = 22/187 (11%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R ++ +E+++++ + H NV+ L + +I+E V G+L FL
Sbjct: 59 REEIEREVSILRQV-LHHNVITLHDVYENRTDVVLILELVSGGELFDFL----------- 106
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC----CKVADFG 154
+ SL+ + TSF Q+ G+ +L ++ I H DL N+++ + + K+ DFG
Sbjct: 107 --AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164
Query: 155 FARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
A ++ E K+ P ++APE + +++D+WS GV+ + I+ G++P+ G
Sbjct: 165 LAHEIEDG--VEFKNIFGTP-EFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLG 220
Query: 215 MAAAEVM 221
E +
Sbjct: 221 DTKQETL 227
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 19/188 (10%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
+ K+L +RE++ + E+++ ++L H +VV G + + FV++E
Sbjct: 49 IVPKSLLLKPHQREKMSM--EISIHRSLA-HQHVVGFHGFFEDNDFVFVVLELC------ 99
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+R +H + +LT + + Q+ G Q+L +IHRDL N+ + E
Sbjct: 100 -------RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE 152
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG A + ERK ++APE L S + D+WS G +++ +
Sbjct: 153 DLEVKIGDFGLATKVEYDG--ERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 210
Query: 205 VTLGSTPY 212
+ +G P+
Sbjct: 211 L-VGKPPF 217
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 19/188 (10%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
+ K+L +RE++ + E+++ ++L H +VV G + + FV++E
Sbjct: 53 IVPKSLLLKPHQREKMSM--EISIHRSLA-HQHVVGFHGFFEDNDFVFVVLELC------ 103
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+R +H + +LT + + Q+ G Q+L +IHRDL N+ + E
Sbjct: 104 -------RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE 156
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG A + ERK ++APE L S + D+WS G +++ +
Sbjct: 157 DLEVKIGDFGLATKVEYDG--ERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 214
Query: 205 VTLGSTPY 212
+ +G P+
Sbjct: 215 L-VGKPPF 221
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 48/212 (22%)
Query: 39 RLDLLQELTVMKT-LDPHPNVVRLLG-----CCTEKEPFFVIMEYVPYGKLQSFLRSSRA 92
R + + E + + L H N+ R + + + ++MEY P G L +L
Sbjct: 49 RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL----- 103
Query: 93 QRYYNNMHGKSNSLTSRDLTSFC---YQVARGMQFLSS---RG------IIHRDLAARNV 140
SL + D S C + V RG+ +L + RG I HRDL +RNV
Sbjct: 104 ------------SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNV 151
Query: 141 LIGENHCCKVADFGFARDLMTSSVYERKSEGRLP------IRWMAPE------SLYDNIF 188
L+ + C ++DFG + L + + E IR+MAPE +L D
Sbjct: 152 LVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXES 211
Query: 189 SVKS-DIWSFGVLIWEIVTLGSTPYPGMAAAE 219
++K D+++ G++ WEI + +PG + E
Sbjct: 212 ALKQVDMYALGLIYWEIFMRCTDLFPGESVPE 243
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
+VA+K + + A E + + E+ V+ + HPN+V L ++IM+ V G+L
Sbjct: 45 LVAIKCIAKKALEGKEGSMENEIAVLHKI-KHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL-- 141
F R Y T RD + +QV +++L GI+HRDL N+L
Sbjct: 104 --FDRIVEKGFY-----------TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYY 150
Query: 142 -IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
+ E+ ++DFG ++ SV S ++APE L +S D WS GV+
Sbjct: 151 SLDEDSKIMISDFGLSKMEDPGSVL---STACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
Query: 201 IWEIVTLGSTPY 212
+ I+ G P+
Sbjct: 208 AY-ILLCGYPPF 218
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 19/188 (10%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
+ K+L +RE++ + E+++ ++L H +VV G + + FV++E
Sbjct: 49 IVPKSLLLKPHQREKMSM--EISIHRSLA-HQHVVGFHGFFEDNDFVFVVLELC------ 99
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+R +H + +LT + + Q+ G Q+L +IHRDL N+ + E
Sbjct: 100 -------RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE 152
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG A + ERK ++APE L S + D+WS G +++ +
Sbjct: 153 DLEVKIGDFGLATKVEYDG--ERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 210
Query: 205 VTLGSTPY 212
+ +G P+
Sbjct: 211 L-VGKPPF 217
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 55 HPNVVRLLGCCTEKEPF----FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRD 110
HP +V + + P +++MEYV L+ + + +T +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-------------GPMTPKR 117
Query: 111 LTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSE 170
+ + F GIIHRD+ N++I + KV DFG AR + S ++
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 171 GRL-PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
+ ++++PE + +SD++S G +++E++T G P+ G
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTG 221
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 35/216 (16%)
Query: 18 GREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEP------F 71
GR G + K + E +EL ++K + H NV+ LL T E F
Sbjct: 47 GRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR-HENVIGLLDVFTPDETLDDFTDF 105
Query: 72 FVIMEYV--PYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRG 129
+++M ++ GKL K L + YQ+ +G++++ + G
Sbjct: 106 YLVMPFMGTDLGKLM-----------------KHEKLGEDRIQFLVYQMLKGLRYIHAAG 148
Query: 130 IIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWM-APESLYDNI- 187
IIHRDL N+ + E+ K+ DFG AR + + G + RW APE + + +
Sbjct: 149 IIHRDLKPGNLAVNEDCELKILDFGLARQA------DSEMXGXVVTRWYRAPEVILNWMR 202
Query: 188 FSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
++ DIWS G ++ E++T G T + G + +K+
Sbjct: 203 YTQTVDIWSVGCIMAEMIT-GKTLFKGSDHLDQLKE 237
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 55 HPNVVRLLGCCTEKEPF----FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRD 110
HP +V + + P +++MEYV L+ + + +T +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-------------GPMTPKR 117
Query: 111 LTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSE 170
+ + F GIIHRD+ N++I + KV DFG AR + S ++
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 171 GRL-PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
+ ++++PE + +SD++S G +++E++T G P+ G
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTG 221
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
+VA+K + + A E + + E+ V+ + HPN+V L ++IM+ V G+L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKI-KHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL-- 141
F R Y T RD + +QV +++L GI+HRDL N+L
Sbjct: 104 --FDRIVEKGFY-----------TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYY 150
Query: 142 -IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
+ E+ ++DFG ++ SV S ++APE L +S D WS GV+
Sbjct: 151 SLDEDSKIMISDFGLSKMEDPGSVL---STACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
Query: 201 IWEIVTLGSTPY 212
+ I+ G P+
Sbjct: 208 AY-ILLCGYPPF 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 55 HPNVVRLLGCCTEKEPF----FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRD 110
HP +V + + P +++MEYV L+ + + +T +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-------------GPMTPKR 117
Query: 111 LTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSE 170
+ + F GIIHRD+ N++I + KV DFG AR + S ++
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 171 GRL-PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
+ ++++PE + +SD++S G +++E++T G P+ G
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTG 221
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 18/198 (9%)
Query: 24 IVAVKTLK-ENAGERERLDLLQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
I A+K +K E + E +D +Q E V + HP +V L C + F ++EYV G
Sbjct: 36 IYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 95
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L ++ R L + +++ + +L RGII+RDL NVL
Sbjct: 96 DLMFHMQRQR-------------KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVL 142
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ K+ D+G ++ + G ++APE L + D W+ GVL+
Sbjct: 143 LDSEGHIKLTDYGMCKEGLRPGDTTSXFCGT--PNYIAPEILRGEDYGFSVDWWALGVLM 200
Query: 202 WEIVTLGSTPYPGMAAAE 219
+E++ G +P+ + +++
Sbjct: 201 FEMMA-GRSPFDIVGSSD 217
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ FG AR D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDD 177
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 178 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 227
Query: 217 AAEVMK 222
+ +K
Sbjct: 228 HIDQLK 233
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 18/198 (9%)
Query: 24 IVAVKTLK-ENAGERERLDLLQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
I A+K +K E + E +D +Q E V + HP +V L C + F ++EYV G
Sbjct: 32 IYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 91
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L ++ R L + +++ + +L RGII+RDL NVL
Sbjct: 92 DLMFHMQRQR-------------KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVL 138
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ K+ D+G ++ + + S ++APE L + D W+ GVL+
Sbjct: 139 LDSEGHIKLTDYGMCKEGLRPG--DTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLM 196
Query: 202 WEIVTLGSTPYPGMAAAE 219
+E++ G +P+ + +++
Sbjct: 197 FEMMA-GRSPFDIVGSSD 213
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 18/198 (9%)
Query: 24 IVAVKTLK-ENAGERERLDLLQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
I A+K +K E + E +D +Q E V + HP +V L C + F ++EYV G
Sbjct: 47 IYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 106
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
L ++ R L + +++ + +L RGII+RDL NVL
Sbjct: 107 DLMFHMQRQR-------------KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVL 153
Query: 142 IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ K+ D+G ++ + + S ++APE L + D W+ GVL+
Sbjct: 154 LDSEGHIKLTDYGMCKEGLRPG--DTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLM 211
Query: 202 WEIVTLGSTPYPGMAAAE 219
+E++ G +P+ + +++
Sbjct: 212 FEMMA-GRSPFDIVGSSD 228
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 55 HPNVVRLLGCCTEKEPF----FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRD 110
HP +V + + P +++MEYV L+ + + +T +
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-------------GPMTPKR 134
Query: 111 LTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSE 170
+ + F GIIHRD+ N++I + KV DFG AR + S ++
Sbjct: 135 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 194
Query: 171 GRL-PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
+ ++++PE + +SD++S G +++E++T G P+ G
Sbjct: 195 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTG 238
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
+VA+K + + A E + + E+ V+ + HPN+V L ++IM+ V G+L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKI-KHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL-- 141
F R Y T RD + +QV +++L GI+HRDL N+L
Sbjct: 104 --FDRIVEKGFY-----------TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYY 150
Query: 142 -IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
+ E+ ++DFG ++ SV S ++APE L +S D WS GV+
Sbjct: 151 SLDEDSKIMISDFGLSKMEDPGSVL---STACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
Query: 201 IWEIVTLGSTPY 212
+ I+ G P+
Sbjct: 208 AY-ILLCGYPPF 218
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 12/164 (7%)
Query: 43 LQELTVMKTLDP--HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
++E+ +++ L+ HPNVVRL+ C I + + + LR+ Y +
Sbjct: 59 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRT-----YLDK-- 111
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
L + + Q RG+ FL + I+HRDL N+L+ K+ADFG AR
Sbjct: 112 APPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR--- 168
Query: 161 TSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
S + + + + APE L + ++ D+WS G + E+
Sbjct: 169 IYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ D G AR D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDD 177
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 178 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 227
Query: 217 AAEVMK 222
+ +K
Sbjct: 228 HIDQLK 233
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
+VA+K + + A E + + E+ V+ + HPN+V L ++IM+ V G+L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKI-KHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL-- 141
F R Y T RD + +QV +++L GI+HRDL N+L
Sbjct: 104 --FDRIVEKGFY-----------TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYY 150
Query: 142 -IGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVL 200
+ E+ ++DFG ++ SV S ++APE L +S D WS GV+
Sbjct: 151 SLDEDSKIMISDFGLSKMEDPGSVL---STACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
Query: 201 IWEIVTLGSTPY 212
+ I+ G P+
Sbjct: 208 AY-ILLCGYPPF 218
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYVP G++ S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + KVADFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 19/188 (10%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
+ K+L +RE++ + E+++ ++L H +VV G + + FV++E
Sbjct: 73 IVPKSLLLKPHQREKMSM--EISIHRSLA-HQHVVGFHGFFEDNDFVFVVLELC------ 123
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+R +H + +LT + + Q+ G Q+L +IHRDL N+ + E
Sbjct: 124 -------RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE 176
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG A + ERK ++APE L S + D+WS G +++ +
Sbjct: 177 DLEVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 234
Query: 205 VTLGSTPY 212
+ +G P+
Sbjct: 235 L-VGKPPF 241
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 19/188 (10%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
+ K+L +RE++ + E+++ ++L H +VV G + + FV++E
Sbjct: 71 IVPKSLLLKPHQREKMSM--EISIHRSLA-HQHVVGFHGFFEDNDFVFVVLELC------ 121
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+R +H + +LT + + Q+ G Q+L +IHRDL N+ + E
Sbjct: 122 -------RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE 174
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG A + ERK ++APE L S + D+WS G +++ +
Sbjct: 175 DLEVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 232
Query: 205 VTLGSTPY 212
+ +G P+
Sbjct: 233 L-VGKPPF 239
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ DF AR D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDD 177
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 178 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 227
Query: 217 AAEVMK 222
+ +K
Sbjct: 228 HIDQLK 233
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 19/188 (10%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 84
+ K+L +RE++ + E+++ ++L H +VV G + + FV++E
Sbjct: 47 IVPKSLLLKPHQREKMSM--EISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELC------ 97
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE 144
+R +H + +LT + + Q+ G Q+L +IHRDL N+ + E
Sbjct: 98 -------RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE 150
Query: 145 NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEI 204
+ K+ DFG A + ERK ++APE L S + D+WS G +++ +
Sbjct: 151 DLEVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 208
Query: 205 VTLGSTPY 212
+ +G P+
Sbjct: 209 L-VGKPPF 215
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ D G AR D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDD 177
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 178 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 227
Query: 217 AAEVMK 222
+ +K
Sbjct: 228 HIDQLK 233
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 25/194 (12%)
Query: 31 KENAGERERLDLLQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRS 89
KE + E +D +Q E V + HP +V L C + F ++EYV G L ++
Sbjct: 87 KELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR 146
Query: 90 SRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCK 149
R L + +++ + +L RGII+RDL NVL+ K
Sbjct: 147 QR-------------KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIK 193
Query: 150 VADFGFARDLM----TSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIV 205
+ D+G ++ + T+S + ++APE L + D W+ GVL++E++
Sbjct: 194 LTDYGMCKEGLRPGDTTSTFCGTP------NYIAPEILRGEDYGFSVDWWALGVLMFEMM 247
Query: 206 TLGSTPYPGMAAAE 219
G +P+ + +++
Sbjct: 248 A-GRSPFDIVGSSD 260
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 15/126 (11%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR---D 158
K LT + YQ+ RG++++ S IIHRDL N+ + E+ K+ D G AR D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDD 177
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPGMA 216
MT G + RW APE + + + ++ DIWS G ++ E++T G T +PG
Sbjct: 178 EMT---------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTD 227
Query: 217 AAEVMK 222
+ +K
Sbjct: 228 HIDQLK 233
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIMEYVPYGKLQSFLRSSRAQRYYN 97
+EL +MK ++ H N++ LL T E + +++ME + Q +R
Sbjct: 72 RELVLMKVVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER--- 127
Query: 98 NMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR 157
++ YQ+ G++ L S GIIHRDL N+++ + K+ DFG AR
Sbjct: 128 -------------MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 158 DLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
TS + R + APE + + DIWS G ++ E++ G +PG
Sbjct: 175 TAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIK-GGVLFPG 227
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 24/197 (12%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL------LGCCTEKEPFFVIMEYV 78
VA+K ++ + R E+ +MK L+ HPNVV L + + MEY
Sbjct: 43 VAIKQCRQELSPKNRERWCLEIQIMKKLN-HPNVVSAREVPDGLQKLAPNDLPLLAMEYC 101
Query: 79 PYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAAR 138
G L+ +L + N G L + + ++ +++L IIHRDL
Sbjct: 102 EGGDLRKYLNQ------FENCCG----LKEGPIRTLLSDISSALRYLHENRIIHRDLKPE 151
Query: 139 NVLIG---ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ D G+A++L + +E ++++APE L ++V D W
Sbjct: 152 NIVLQPGPQRLIHKIIDLGYAKELDQGELC---TEFVGTLQYLAPELLEQKKYTVTVDYW 208
Query: 196 SFGVLIWEIVTLGSTPY 212
SFG L +E +T G P+
Sbjct: 209 SFGTLAFECIT-GFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 24/197 (12%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL------LGCCTEKEPFFVIMEYV 78
VA+K ++ + R E+ +MK L+ HPNVV L + + MEY
Sbjct: 42 VAIKQCRQELSPKNRERWCLEIQIMKKLN-HPNVVSAREVPDGLQKLAPNDLPLLAMEYC 100
Query: 79 PYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAAR 138
G L+ +L + N G L + + ++ +++L IIHRDL
Sbjct: 101 EGGDLRKYLNQ------FENCCG----LKEGPIRTLLSDISSALRYLHENRIIHRDLKPE 150
Query: 139 NVLIG---ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ D G+A++L + +E ++++APE L ++V D W
Sbjct: 151 NIVLQPGPQRLIHKIIDLGYAKELDQGELC---TEFVGTLQYLAPELLEQKKYTVTVDYW 207
Query: 196 SFGVLIWEIVTLGSTPY 212
SFG L +E +T G P+
Sbjct: 208 SFGTLAFECIT-GFRPF 223
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 34/218 (15%)
Query: 17 RGREGPCIVAVKTLK-ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCC-TEKEPF-FV 73
+GR + VK LK + R+ D +E ++ HPNV+ +LG C + P +
Sbjct: 28 KGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFS-HPNVLPVLGACQSPPAPHPTL 86
Query: 74 IMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR-DLTSFCYQVARGMQFLSS-RGII 131
I + PYG L YN +H +N + + F ARG FL + +I
Sbjct: 87 ITHWXPYGSL------------YNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLI 134
Query: 132 HRD-LAARNVLIGENHCCKV--ADFGFARDLMTSSVYERKSEGRLPIRWMAPESLY---D 185
R L +R+V I E+ ++ AD F+ ++ P W+APE+L +
Sbjct: 135 PRHALNSRSVXIDEDXTARISXADVKFS--------FQSPGRXYAPA-WVAPEALQKKPE 185
Query: 186 NIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
+ +D WSF VL+WE+VT P+ ++ E+ K
Sbjct: 186 DTNRRSADXWSFAVLLWELVT-REVPFADLSNXEIGXK 222
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 23/188 (12%)
Query: 27 VKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF 86
V+ K+ A + ++L+E+ HP +V L+ ++I+EY+ G+L F
Sbjct: 59 VRNAKDTAHTKAERNILEEVK-------HPFIVDLIYAFQTGGKLYLILEYLSGGEL--F 109
Query: 87 LRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENH 146
++ R + + + +++ + L +GII+RDL N+++
Sbjct: 110 MQLEREGIFMEDT-----------ACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQG 158
Query: 147 CCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVT 206
K+ DFG ++ + G I +MAPE L + + D WS G L+++++T
Sbjct: 159 HVKLTDFGLCKESIHDGTVTHXFCGT--IEYMAPEILMRSGHNRAVDWWSLGALMYDMLT 216
Query: 207 LGSTPYPG 214
G+ P+ G
Sbjct: 217 -GAPPFTG 223
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIMEYVPYGKLQSFLRSSRAQRYYN 97
+EL +MK ++ H N++ LL T E + +++ME + Q +R
Sbjct: 72 RELVLMKVVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER--- 127
Query: 98 NMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR 157
++ YQ+ G++ L S GIIHRDL N+++ + K+ DFG AR
Sbjct: 128 -------------MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 158 DLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
TS + R + APE + + DIWS G ++ E++ G +PG
Sbjct: 175 TAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIK-GGVLFPG 227
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 88/191 (46%), Gaps = 29/191 (15%)
Query: 27 VKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF 86
V+ K+ A + ++L+E+ HP +V L+ ++I+EY+ G+L F
Sbjct: 59 VRNAKDTAHTKAERNILEEVK-------HPFIVDLIYAFQTGGKLYLILEYLSGGEL--F 109
Query: 87 LRSSRAQRYYNNMHGKSNSLTSRDLTSFCY---QVARGMQFLSSRGIIHRDLAARNVLIG 143
++ R + + + C+ +++ + L +GII+RDL N+++
Sbjct: 110 MQLEREGIFMED--------------TACFYLAEISMALGHLHQKGIIYRDLKPENIMLN 155
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWE 203
K+ DFG ++ + G I +MAPE L + + D WS G L+++
Sbjct: 156 HQGHVKLTDFGLCKESIHDGTVTHTFCGT--IEYMAPEILMRSGHNRAVDWWSLGALMYD 213
Query: 204 IVTLGSTPYPG 214
++T G+ P+ G
Sbjct: 214 MLT-GAPPFTG 223
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
KS L++ + F YQ+ RG++++ S ++HRDL N+LI K+ DFG AR
Sbjct: 137 KSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADP 196
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVT 206
+ + RW APE + ++ KS DIWS G ++ E+++
Sbjct: 197 EHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 27/177 (15%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIMEYVPYGKLQSFLRSSRAQRYYN 97
+EL +MK ++ H N++ LL T E + +++ME + Q +R
Sbjct: 72 RELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER--- 127
Query: 98 NMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR 157
++ YQ+ G++ L S GIIHRDL N+++ + K+ DFG AR
Sbjct: 128 -------------MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 158 DLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
TS + + R + APE + + DIWS G ++ E++ G +PG
Sbjct: 175 TAGTSFMMTPEVVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIK-GGVLFPG 227
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEY+P G + S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + KVADFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 31/190 (16%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIM 75
VA+K L +N +R +EL +MK ++ H N++ LL T E + +++M
Sbjct: 52 VAIKKLSRPFQNQTHAKRA--YRELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E + Q +R ++ YQ+ G++ L S GIIHRDL
Sbjct: 109 ELMDANLCQVIQMELDHER----------------MSYLLYQMLCGIKHLHSAGIIHRDL 152
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ DFG AR TS + E + R + APE + + DIW
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY---YRAPEVILGMGYKENVDIW 209
Query: 196 SFGVLIWEIV 205
S G ++ E+V
Sbjct: 210 SVGCIMGEMV 219
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEY+P G + S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + KVADFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 20/184 (10%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R +++EL V+ + P +V G + ME++ G L L+
Sbjct: 51 RNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---------- 99
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSR-GIIHRDLAARNVLIGENHCCKVADFGFAR 157
K+ + + L V +G+ +L + I+HRD+ N+L+ K+ DFG +
Sbjct: 100 ---KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG 156
Query: 158 DLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
L+ E +E +M+PE L +SV+SDIWS G+ + E+ +G P P MA
Sbjct: 157 QLID----EMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPRPPMAI 211
Query: 218 AEVM 221
E++
Sbjct: 212 FELL 215
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIM 75
VA+K L +N +R +EL +MK ++ H N++ LL T E + +++M
Sbjct: 52 VAIKKLSRPFQNQTHAKRA--YRELVLMKXVN-HKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E + Q +R ++ YQ+ G++ L S GIIHRDL
Sbjct: 109 ELMDANLXQVIQMELDHER----------------MSYLLYQMLXGIKHLHSAGIIHRDL 152
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ DFG AR TS + R + APE + + DIW
Sbjct: 153 KPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDIW 209
Query: 196 SFGVLIWEIV 205
S G ++ E+V
Sbjct: 210 SVGCIMGEMV 219
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 26/186 (13%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R +++EL V+ + P +V G + ME++ G L L+ A+R
Sbjct: 58 RNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--EAKRIPEE 114
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSR-GIIHRDLAARNVLIGENHCCKVADFGFAR 157
+ GK V RG+ +L + I+HRD+ N+L+ K+ DFG +
Sbjct: 115 ILGK-----------VSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSG 163
Query: 158 DL---MTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
L M +S +S +MAPE L +SV+SDIWS G+ + E+ +G P P
Sbjct: 164 QLIDSMANSFVGTRS-------YMAPERLQGTHYSVQSDIWSMGLSLVEL-AVGRYPIPP 215
Query: 215 MAAAEV 220
A E+
Sbjct: 216 PDAKEL 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIMEYVPYGKLQSFLRSSRAQRYYN 97
+EL +MK ++ H N++ LL T E + +++ME + Q +R
Sbjct: 72 RELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER--- 127
Query: 98 NMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR 157
++ YQ+ G++ L S GIIHRDL N+++ + K+ DFG AR
Sbjct: 128 -------------MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 158 DLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
TS + R + APE + + DIWS G ++ E++ G +PG
Sbjct: 175 TAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIK-GGVLFPG 227
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 32/199 (16%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIM 75
VA+K L +N +R +EL +MK ++ H N++ LL T E + +++M
Sbjct: 52 VAIKKLSRPFQNQTHAKRA--YRELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E + Q +R ++ YQ+ G++ L S GIIHRDL
Sbjct: 109 ELMDANLCQVIQMELDHER----------------MSYLLYQMLCGIKHLHSAGIIHRDL 152
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ DFG AR TS + R + APE + + DIW
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDIW 209
Query: 196 SFGVLIWEIVTLGSTPYPG 214
S G ++ E++ G +PG
Sbjct: 210 SVGCIMGEMIK-GGVLFPG 227
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIM 75
VA+K L +N +R +EL +MK ++ H N++ LL T E + +++M
Sbjct: 52 VAIKKLSRPFQNQTHAKRA--YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E + Q +R ++ YQ+ G++ L S GIIHRDL
Sbjct: 109 ELMDANLXQVIQMELDHER----------------MSYLLYQMLXGIKHLHSAGIIHRDL 152
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ DFG AR TS + R + APE + + DIW
Sbjct: 153 KPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDIW 209
Query: 196 SFGVLIWEIV 205
S G ++ E+V
Sbjct: 210 SVGCIMGEMV 219
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 32/199 (16%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIM 75
VA+K L +N +R +EL +MK ++ H N++ LL T E + +++M
Sbjct: 53 VAIKKLSRPFQNQTHAKRA--YRELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVM 109
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E + Q +R ++ YQ+ G++ L S GIIHRDL
Sbjct: 110 ELMDANLCQVIQMELDHER----------------MSYLLYQMLCGIKHLHSAGIIHRDL 153
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ DFG AR TS + R + APE + + DIW
Sbjct: 154 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDIW 210
Query: 196 SFGVLIWEIVTLGSTPYPG 214
S G ++ E++ G +PG
Sbjct: 211 SVGCIMGEMIK-GGVLFPG 228
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 37/213 (17%)
Query: 45 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG----KLQSFLRSSRA-------- 92
E+ +MK L HPN+ RL +++ ++ME G KL F+ S
Sbjct: 78 EVRLMKKLH-HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVK 136
Query: 93 -----------QRYYNNMHGKSNSLT----SRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
+ ++HG SL + +++ Q+ + +L ++GI HRD+
Sbjct: 137 TQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKP 196
Query: 138 RNVLIGENHC--CKVADFGFARD---LMTSSVYERKSEGRLPIRWMAPESL--YDNIFSV 190
N L N K+ DFG +++ L Y ++ P ++APE L + +
Sbjct: 197 ENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPY-FVAPEVLNTTNESYGP 255
Query: 191 KSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
K D WS GVL+ ++ +G+ P+PG+ A+ + +
Sbjct: 256 KCDAWSAGVLL-HLLLMGAVPFPGVNDADTISQ 287
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYVP G++ S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYVP G++ S LR R R+ + H +
Sbjct: 75 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRF-SEPHAR 130
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 131 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 174
Query: 163 SVYERKSEGRLPI-----RWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 175 ----KRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 229
Query: 218 AEVMKK 223
++ +K
Sbjct: 230 IQIYEK 235
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYVP G++ S LR R R+ + H +
Sbjct: 90 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRF-SEPHAR 145
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 146 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 189
Query: 163 SVYERKSEGRLPI-----RWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 190 ----KRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 244
Query: 218 AEVMKK 223
++ +K
Sbjct: 245 IQIYEK 250
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYVP G++ S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 44 QELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRY-YNNMH 100
+E+ +++ L H NV++L+ EK+ +++MEY G +Q L S +R+ H
Sbjct: 55 KEIQLLRRLR-HKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAH 112
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
G FC Q+ G+++L S+GI+H+D+ N+L+ K++ G A L
Sbjct: 113 G-----------YFC-QLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALH 160
Query: 161 TSSVYE--RKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
+ + R S+G + + D K DIWS GV ++ I T G P+ G
Sbjct: 161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITT-GLYPFEG 215
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYVP G++ S LR R R+ + H +
Sbjct: 82 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRF-SEPHAR 137
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 138 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 181
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 182 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 236
Query: 218 AEVMKK 223
++ +K
Sbjct: 237 IQIYEK 242
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIM 75
VA+K L +N +R +EL +MK ++ H N++ LL T E + +++M
Sbjct: 45 VAIKKLSRPFQNQTHAKRA--YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVM 101
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E + Q +R ++ YQ+ G++ L S GIIHRDL
Sbjct: 102 ELMDANLXQVIQMELDHER----------------MSYLLYQMLXGIKHLHSAGIIHRDL 145
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ DFG AR TS + R + APE + + DIW
Sbjct: 146 KPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDIW 202
Query: 196 SFGVLIWEIV 205
S G ++ E+V
Sbjct: 203 SVGCIMGEMV 212
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYVP G++ S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYVP G++ S LR R R+ + H +
Sbjct: 90 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRF-SEPHAR 145
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 146 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 189
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 190 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 244
Query: 218 AEVMKK 223
++ +K
Sbjct: 245 IQIYEK 250
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYVP G++ S LR R R+ + H +
Sbjct: 90 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRF-SEPHAR 145
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 146 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 189
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 190 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 244
Query: 218 AEVMKK 223
++ +K
Sbjct: 245 IQIYEK 250
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 32/199 (16%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIM 75
VA+K L +N +R +EL +MK ++ H N++ LL T E + +++M
Sbjct: 52 VAIKKLSRPFQNQTHAKRA--YRELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E + Q +R ++ YQ+ G++ L S GIIHRDL
Sbjct: 109 ELMDANLCQVIQMELDHER----------------MSYLLYQMLCGIKHLHSAGIIHRDL 152
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ DFG AR TS + R + APE + + DIW
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDIW 209
Query: 196 SFGVLIWEIVTLGSTPYPG 214
S G ++ E++ G +PG
Sbjct: 210 SVGCIMGEMIK-GGVLFPG 227
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYVP G++ S LR R R+ + H +
Sbjct: 90 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRF-SEPHAR 145
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 146 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 189
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 190 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 244
Query: 218 AEVMKK 223
++ +K
Sbjct: 245 IQIYEK 250
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYVP G++ S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYVP G++ S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYVP G++ S LR R R+ + H +
Sbjct: 90 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRF-SEPHAR 145
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 146 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 189
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 190 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 244
Query: 218 AEVMKK 223
++ +K
Sbjct: 245 IQIYEK 250
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 30/175 (17%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYVP G++ S LR R R+ + H +
Sbjct: 110 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRF-SEPHAR 165
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 166 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 209
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 210 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPF 259
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 26/168 (15%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIMEYVPYGKLQSFLRSSRAQRYYN 97
+EL +MK ++ H N++ LL T E + +++ME + Q +R
Sbjct: 72 RELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER--- 127
Query: 98 NMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR 157
++ YQ+ G++ L S GIIHRDL N+++ + K+ DFG AR
Sbjct: 128 -------------MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 158 DLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIV 205
TS + E + R + APE + + D+WS G ++ E+V
Sbjct: 175 TAGTSFMMEPEVVTRY---YRAPEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYVP G++ S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 32/199 (16%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIM 75
VA+K L +N +R +EL +MK ++ H N++ LL T E + +++M
Sbjct: 52 VAIKKLSRPFQNQTHAKRA--YRELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E + Q +R ++ YQ+ G++ L S GIIHRDL
Sbjct: 109 ELMDANLSQVIQMELDHER----------------MSYLLYQMLCGIKHLHSAGIIHRDL 152
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ DFG AR TS + R + APE + + DIW
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDIW 209
Query: 196 SFGVLIWEIVTLGSTPYPG 214
S G ++ E++ G +PG
Sbjct: 210 SVGCIMGEMIK-GGVLFPG 227
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 30/181 (16%)
Query: 57 NVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCY 116
N V+ + +K F+ MEY G L Y+ +H ++ + +
Sbjct: 76 NFVKPMTAVKKKSTLFIQMEYCENGTL------------YDLIHSENLNQQRDEYWRLFR 123
Query: 117 QVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLP-- 174
Q+ + ++ S+GIIHRDL N+ I E+ K+ DFG A+++ S + LP
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 175 ----------IRWMAPESLYDNI--FSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMK 222
++A E L D ++ K D++S G++ +E++ ST GM ++K
Sbjct: 184 SDNLTSAIGTAMYVATEVL-DGTGHYNEKIDMYSLGIIFFEMIYPFST---GMERVNILK 239
Query: 223 K 223
K
Sbjct: 240 K 240
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 38/199 (19%)
Query: 43 LQELTVMKTLDPHPNVVRL--------------LGCCTEKEPFFVIMEYVPYGKLQSFLR 88
L+E+ +++ LD H N+V++ +G TE +++ EY +++ L
Sbjct: 56 LREIKIIRRLD-HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEY-----METDLA 109
Query: 89 SSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG-ENHC 147
+ Q H + F YQ+ RG++++ S ++HRDL N+ I E+
Sbjct: 110 NVLEQGPLLEEHARL----------FMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLV 159
Query: 148 CKVADFGFARDLMTSSVYERK---SEGRLPIRWMAPESLYD-NIFSVKSDIWSFGVLIWE 203
K+ DFG AR + Y K SEG + + +P L N ++ D+W+ G + E
Sbjct: 160 LKIGDFGLAR--IMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAE 217
Query: 204 IVTLGSTPYPGMAAAEVMK 222
++T G T + G E M+
Sbjct: 218 MLT-GKTLFAGAHELEQMQ 235
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K+ L++ + F YQ+ RG++++ S ++HRDL N+L+ K+ DFG AR
Sbjct: 137 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADP 196
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVT 206
+ + RW APE + ++ KS DIWS G ++ E+++
Sbjct: 197 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K+ L++ + F YQ+ RG++++ S ++HRDL N+L+ K+ DFG AR
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADP 176
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTP-YPG 214
+ + RW APE + ++ KS DIWS G ++ E+ L + P +PG
Sbjct: 177 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPG 230
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 29/173 (16%)
Query: 56 PNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 115
P +V+L + ++++EY P G++ S LR R R+ + H + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLR--RIGRF-SEPHARF----------YA 148
Query: 116 YQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRL-- 173
Q+ ++L S +I+RDL N+LI + KVADFGFA ++ +GR
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA----------KRVKGRTWX 198
Query: 174 ---PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
++APE + ++ D W+ GVLI+E+ G P+ ++ +K
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEK 250
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K+ L++ + F YQ+ RG++++ S ++HRDL N+L+ K+ DFG AR
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADP 176
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTP-YPG 214
+ + RW APE + ++ KS DIWS G ++ E+ L + P +PG
Sbjct: 177 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPG 230
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K+ L++ + F YQ+ RG++++ S ++HRDL N+L+ K+ DFG AR
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADP 180
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVT 206
+ + RW APE + ++ KS DIWS G ++ E+++
Sbjct: 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K+ L++ + F YQ+ RG++++ S ++HRDL N+L+ K+ DFG AR
Sbjct: 119 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADP 178
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVT 206
+ + RW APE + ++ KS DIWS G ++ E+++
Sbjct: 179 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K+ L++ + F YQ+ RG++++ S ++HRDL N+L+ K+ DFG AR
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADP 176
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTP-YPG 214
+ + RW APE + ++ KS DIWS G ++ E+ L + P +PG
Sbjct: 177 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPG 230
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYVP G++ S LR R R+ H +
Sbjct: 82 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRF-XEPHAR 137
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 138 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 181
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 182 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 236
Query: 218 AEVMKK 223
++ +K
Sbjct: 237 IQIYEK 242
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K+ L++ + F YQ+ RG++++ S ++HRDL N+L+ K+ DFG AR
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADP 180
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVT 206
+ + RW APE + ++ KS DIWS G ++ E+++
Sbjct: 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 98/200 (49%), Gaps = 25/200 (12%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
R ++ +VAVK ++ GE+ ++ +E+ ++L HPN+VR ++ME
Sbjct: 39 RDKQANELVAVKYIER--GEKIDENVKREIINHRSLR-HPNIVRFKEVILTPTHLAIVME 95
Query: 77 YVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCY-QVARGMQFLSSRGIIHRDL 135
Y G+L F R A R+ S D F + Q+ G+ + + + HRDL
Sbjct: 96 YASGGEL--FERICNAGRF------------SEDEARFFFQQLISGVSYAHAMQVAHRDL 141
Query: 136 AARNVLIGENHC--CKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVK-S 192
N L+ + K+ADFG+++ + S + KS P ++APE L + K +
Sbjct: 142 KLENTLLDGSPAPRLKIADFGYSKASVLHS--QPKSAVGTPA-YIAPEVLLKKEYDGKVA 198
Query: 193 DIWSFGVLIWEIVTLGSTPY 212
D+WS GV ++ ++ +G+ P+
Sbjct: 199 DVWSCGVTLY-VMLVGAYPF 217
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYVP G++ S LR R R+ H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRF-XEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYVP G++ S LR R R+ H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRF-XEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 71/142 (50%), Gaps = 14/142 (9%)
Query: 71 FFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGI 130
F+ ME+ G L+ ++ R + K + + + +L Q+ +G+ ++ S+ +
Sbjct: 109 LFIQMEFCDKGTLEQWIEKRRGE--------KLDKVLALELFE---QITKGVDYIHSKKL 157
Query: 131 IHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSV 190
IHRDL N+ + + K+ DFG L +++ + +R+M+PE + +
Sbjct: 158 IHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGK 214
Query: 191 KSDIWSFGVLIWEIVTLGSTPY 212
+ D+++ G+++ E++ + T +
Sbjct: 215 EVDLYALGLILAELLHVCDTAF 236
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 17/170 (10%)
Query: 45 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 104
E V++ + P +V L + +I++Y+ G+L F S+ +R+
Sbjct: 108 ERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGEL--FTHLSQRERF--------- 156
Query: 105 SLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSV 164
T ++ + ++ ++ L GII+RD+ N+L+ N + DFG +++ +
Sbjct: 157 --TEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET 214
Query: 165 YERKSEGRLPIRWMAPESLY--DNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
ER + I +MAP+ + D+ D WS GVL++E++T G++P+
Sbjct: 215 -ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT-GASPF 262
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIM 75
VA+K L +N +R +EL +MK ++ H N++ LL T E + +++M
Sbjct: 52 VAIKKLSRPFQNQTHAKRA--YRELVLMKXVN-HKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E + Q +R ++ YQ+ G++ L S GIIHRDL
Sbjct: 109 ELMDANLXQVIQMELDHER----------------MSYLLYQMLCGIKHLHSAGIIHRDL 152
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ DFG AR TS + R + APE + + DIW
Sbjct: 153 KPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDIW 209
Query: 196 SFGVLIWEIV 205
S G ++ E+V
Sbjct: 210 SVGCIMGEMV 219
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYVP G++ S LR R R+ H +
Sbjct: 90 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRF-XEPHAR 145
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 146 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 189
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 190 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 244
Query: 218 AEVMKK 223
++ +K
Sbjct: 245 IQIYEK 250
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 22/154 (14%)
Query: 73 VIMEYVP---YGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRG 129
VIMEYVP + L+SF+RS R S+ ++ + YQ+ R + F+ S G
Sbjct: 115 VIMEYVPDTLHKVLKSFIRSGR-------------SIPMNLISIYIYQLFRAVGFIHSLG 161
Query: 130 IIHRDLAARNVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI- 187
I HRD+ +N+L+ +++ K+ DFG A+ L+ S R + APE +
Sbjct: 162 ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRF---YRAPELMLGATE 218
Query: 188 FSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVM 221
++ D+WS G + E++ LG + G + + +
Sbjct: 219 YTPSIDLWSIGCVFGELI-LGKPLFSGETSIDQL 251
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 93/203 (45%), Gaps = 36/203 (17%)
Query: 26 AVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCC----------------TEKE 69
+K +K N + ER E+ + LD H N+V GC ++ +
Sbjct: 40 VIKRVKYNNEKAER-----EVKALAKLD-HVNIVHYNGCWDGFDYDPETSSKNSSRSKTK 93
Query: 70 PFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRG 129
F+ ME+ G L+ ++ R + K + + + +L Q+ +G+ ++ S+
Sbjct: 94 CLFIQMEFCDKGTLEQWIEKRRGE--------KLDKVLALELFE---QITKGVDYIHSKK 142
Query: 130 IIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFS 189
+I+RDL N+ + + K+ DFG L R S+G L R+M+PE + +
Sbjct: 143 LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXR-SKGTL--RYMSPEQISSQDYG 199
Query: 190 VKSDIWSFGVLIWEIVTLGSTPY 212
+ D+++ G+++ E++ + T +
Sbjct: 200 KEVDLYALGLILAELLHVCDTAF 222
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K+ L++ + F YQ+ RG++++ S ++HRDL N+L+ K+ DFG AR
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVT 206
+ + RW APE + ++ KS DIWS G ++ E+++
Sbjct: 181 DHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIM 75
VA+K L +N +R +EL +MK ++ H N++ LL T E + +++M
Sbjct: 52 VAIKKLSRPFQNQTHAKRA--YRELVLMKXVN-HKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E + Q +R ++ YQ+ G++ L S GIIHRDL
Sbjct: 109 ELMDANLCQVIQMELDHER----------------MSYLLYQMLCGIKHLHSAGIIHRDL 152
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ DFG AR TS + R + APE + + DIW
Sbjct: 153 KPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDIW 209
Query: 196 SFGVLIWEIV 205
S G ++ E+V
Sbjct: 210 SVGCIMGEMV 219
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K+ L++ + F YQ+ RG++++ S ++HRDL N+L+ K+ DFG AR
Sbjct: 122 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 181
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVT 206
+ + RW APE + ++ KS DIWS G ++ E+++
Sbjct: 182 DHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIMEYVPYGKLQSFLRSSRAQRYYN 97
+EL +MK ++ H N++ LL T E + +++ME + Q +R
Sbjct: 74 RELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER--- 129
Query: 98 NMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR 157
++ YQ+ G++ L S GIIHRDL N+++ + K+ DFG AR
Sbjct: 130 -------------MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 176
Query: 158 DLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
TS + R + APE + + DIWS G ++ E++ G +PG
Sbjct: 177 TAGTSFMMVPFVVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIK-GGVLFPG 229
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEY P G++ S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N++I + KV DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 30/175 (17%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEY P G++ S LR R R+ + H +
Sbjct: 90 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR--RIGRF-SEPHAR 145
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N++I + KV DFGFA
Sbjct: 146 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA------ 189
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 190 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPF 239
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
+VA+K + +N + + E+ +K L H ++ +L F+++EY P G+L
Sbjct: 37 MVAIKIMDKNTLGSDLPRIKTEIEALKNLR-HQHICQLYHVLETANKIFMVLEYCPGGEL 95
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
++ S + L+ + Q+ + ++ S+G HRDL N+L
Sbjct: 96 FDYIISQ-------------DRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFD 142
Query: 144 ENHCCKVADFGF-ARDLMTSSVYERKSEGRLPIRWMAPESLYDNIF-SVKSDIWSFGVLI 201
E H K+ DFG A+ + + G L + APE + + ++D+WS G+L+
Sbjct: 143 EYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLA--YAAPELIQGKSYLGSEADVWSMGILL 200
Query: 202 WEIVTLGSTPYPGMAAAEVMKK 223
+ ++ G P+ + KK
Sbjct: 201 Y-VLMCGFLPFDDDNVMALYKK 221
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K+ L++ + F YQ+ RG++++ S ++HRDL N+L+ K+ DFG AR
Sbjct: 115 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 174
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTP-YPG 214
+ + RW APE + ++ KS DIWS G ++ E+ L + P +PG
Sbjct: 175 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPG 228
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K+ L++ + F YQ+ RG++++ S ++HRDL N+L+ K+ DFG AR
Sbjct: 115 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 174
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTP-YPG 214
+ + RW APE + ++ KS DIWS G ++ E+ L + P +PG
Sbjct: 175 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPG 228
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K+ L++ + F YQ+ RG++++ S ++HRDL N+L+ K+ DFG AR
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVT 206
+ + RW APE + ++ KS DIWS G ++ E+++
Sbjct: 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K+ L++ + F YQ+ RG++++ S ++HRDL N+L+ K+ DFG AR
Sbjct: 122 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 181
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVT 206
+ + RW APE + ++ KS DIWS G ++ E+++
Sbjct: 182 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K+ L++ + F YQ+ RG++++ S ++HRDL N+L+ K+ DFG AR
Sbjct: 123 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 182
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVT 206
+ + RW APE + ++ KS DIWS G ++ E+++
Sbjct: 183 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 229
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K+ L++ + F YQ+ RG++++ S ++HRDL N+L+ K+ DFG AR
Sbjct: 114 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 173
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVT 206
+ + RW APE + ++ KS DIWS G ++ E+++
Sbjct: 174 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 220
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K+ L++ + F YQ+ RG++++ S ++HRDL N+L+ K+ DFG AR
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVT 206
+ + RW APE + ++ KS DIWS G ++ E+++
Sbjct: 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K+ L++ + F YQ+ RG++++ S ++HRDL N+L+ K+ DFG AR
Sbjct: 119 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 178
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTP-YPG 214
+ + RW APE + ++ KS DIWS G ++ E+ L + P +PG
Sbjct: 179 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPG 232
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K+ L++ + F YQ+ RG++++ S ++HRDL N+L+ K+ DFG AR
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 176
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTP-YPG 214
+ + RW APE + ++ KS DIWS G ++ E+ L + P +PG
Sbjct: 177 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPG 230
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K+ L++ + F YQ+ RG++++ S ++HRDL N+L+ K+ DFG AR
Sbjct: 137 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 196
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVT 206
+ + RW APE + ++ KS DIWS G ++ E+++
Sbjct: 197 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 89/181 (49%), Gaps = 20/181 (11%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E++ +K L HP++++L T +++EY G+L ++ +
Sbjct: 58 REISYLKLLR-HPHIIKLYDVITTPTDIVMVIEYAG-GELFDYIVEKK------------ 103
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+T + F Q+ +++ I+HRDL N+L+ +N K+ADFG + ++MT
Sbjct: 104 -RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLS-NIMTDG 161
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFS-VKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMK 222
+ + S G + APE + +++ + D+WS G++++ ++ +G P+ + K
Sbjct: 162 NFLKTSCGSP--NYAAPEVINGKLYAGPEVDVWSCGIVLY-VMLVGRLPFDDEFIPNLFK 218
Query: 223 K 223
K
Sbjct: 219 K 219
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K+ L++ + F YQ+ RG++++ S ++HRDL N+L+ K+ DFG AR
Sbjct: 119 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 178
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVT 206
+ + RW APE + ++ KS DIWS G ++ E+++
Sbjct: 179 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K+ L++ + F YQ+ RG++++ S ++HRDL N+L+ K+ DFG AR
Sbjct: 125 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 184
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVT 206
+ + RW APE + ++ KS DIWS G ++ E+++
Sbjct: 185 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K+ L++ + F YQ+ RG++++ S ++HRDL N+L+ K+ DFG AR
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 176
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVT 206
+ + RW APE + ++ KS DIWS G ++ E+++
Sbjct: 177 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 26/186 (13%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R +++EL V+ + P +V G + ME++ G L L+
Sbjct: 110 RNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---------- 158
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSR-GIIHRDLAARNVLIGENHCCKVADFGFAR 157
K+ + + L V +G+ +L + I+HRD+ N+L+ K+ DFG +
Sbjct: 159 ---KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG 215
Query: 158 DL---MTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
L M +S +S +M+PE L +SV+SDIWS G+ + E+ +G P P
Sbjct: 216 QLIDSMANSFVGTRS-------YMSPERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPIPP 267
Query: 215 MAAAEV 220
A E+
Sbjct: 268 PDAKEL 273
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 78/177 (44%), Gaps = 27/177 (15%)
Query: 55 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 114
H ++V G C + ++ E+V +G L ++L+ ++ N +
Sbjct: 71 HKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNK------------NCINILWKLEV 118
Query: 115 CYQVARGMQFLSSRGIIHRDLAARNVLI--------GENHCCKVADFGFARDLMTSSVYE 166
Q+A M FL +IH ++ A+N+L+ G K++D G + ++ + +
Sbjct: 119 AKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQ 178
Query: 167 RKSEGRLPIRWMAPESLYD-NIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMK 222
+ I W+ PE + + ++ +D WSFG +WEI + G P + + ++
Sbjct: 179 ER------IPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQ 229
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 93/191 (48%), Gaps = 27/191 (14%)
Query: 27 VKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF 86
+ T K +A + ++L+ +E + + L HPN+VRL E+ +++ + V G+L
Sbjct: 62 INTKKLSARDFQKLE--REARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGEL--- 115
Query: 87 LRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI---G 143
A+ +Y + D + Q+ + + S GI+HR+L N+L+
Sbjct: 116 FEDIVAREFY----------SEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA 165
Query: 144 ENHCCKVADFGFARDLMTSSVYE--RKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ K+ADFG A ++ S + + G +++PE L + +S DIW+ GV++
Sbjct: 166 KGAAVKLADFGLAIEVNDSEAWHGFAGTPG-----YLSPEVLKKDPYSKPVDIWACGVIL 220
Query: 202 WEIVTLGSTPY 212
+ I+ +G P+
Sbjct: 221 Y-ILLVGYPPF 230
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEY P G++ S LR R R+ H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR--RIGRF-XEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N++I + KV DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 26/186 (13%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R +++EL V+ + P +V G + ME++ G L L+
Sbjct: 75 RNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---------- 123
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSR-GIIHRDLAARNVLIGENHCCKVADFGFAR 157
K+ + + L V +G+ +L + I+HRD+ N+L+ K+ DFG +
Sbjct: 124 ---KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG 180
Query: 158 DL---MTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
L M +S +S +M+PE L +SV+SDIWS G+ + E+ +G P P
Sbjct: 181 QLIDSMANSFVGTRS-------YMSPERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPIPP 232
Query: 215 MAAAEV 220
A E+
Sbjct: 233 PDAKEL 238
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYV G++ S LR R R+ + H +
Sbjct: 76 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRF-SEPHAR 131
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI E +V DFGFA
Sbjct: 132 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFA------ 175
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 176 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 230
Query: 218 AEVMKK 223
++ +K
Sbjct: 231 IQIYEK 236
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 32/179 (17%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEP------FFVIMEYVPYGKLQSFLRSSRAQRYYN 97
+EL ++K + H NV+ LL T F+++M + +Q+ L+ ++
Sbjct: 72 RELLLLKHMQ-HENVIGLLDVFTPASSLRNFYDFYLVMPF-----MQTDLQKIMGLKF-- 123
Query: 98 NMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR 157
+ + YQ+ +G++++ S G++HRDL N+ + E+ K+ DFG AR
Sbjct: 124 ---------SEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR 174
Query: 158 DLMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPG 214
+ + G + RW APE + + ++ DIWS G ++ E++T G T + G
Sbjct: 175 HA------DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLT-GKTLFKG 226
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 32/179 (17%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEP------FFVIMEYVPYGKLQSFLRSSRAQRYYN 97
+EL ++K + H NV+ LL T F+++M + +Q+ L+ +
Sbjct: 90 RELLLLKHMQ-HENVIGLLDVFTPASSLRNFYDFYLVMPF-----MQTDLQKIMGMEF-- 141
Query: 98 NMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFAR 157
+ + YQ+ +G++++ S G++HRDL N+ + E+ K+ DFG AR
Sbjct: 142 ---------SEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR 192
Query: 158 DLMTSSVYERKSEGRLPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYPG 214
+ + G + RW APE + + ++ DIWS G ++ E++T G T + G
Sbjct: 193 HA------DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLT-GKTLFKG 244
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 93/191 (48%), Gaps = 27/191 (14%)
Query: 27 VKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF 86
+ T K +A + ++L+ +E + + L HPN+VRL E+ +++ + V G+L
Sbjct: 38 INTKKLSARDFQKLE--REARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGEL--- 91
Query: 87 LRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI---G 143
A+ +Y+ D + Q+ + + S GI+HR+L N+L+
Sbjct: 92 FEDIVAREFYSEA----------DASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA 141
Query: 144 ENHCCKVADFGFARDLMTSSVYE--RKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ K+ADFG A ++ S + + G +++PE L + +S DIW+ GV++
Sbjct: 142 KGAAVKLADFGLAIEVNDSEAWHGFAGTPG-----YLSPEVLKKDPYSKPVDIWACGVIL 196
Query: 202 WEIVTLGSTPY 212
+ I+ +G P+
Sbjct: 197 Y-ILLVGYPPF 206
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 26/186 (13%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R +++EL V+ + P +V G + ME++ G L L+
Sbjct: 48 RNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---------- 96
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSR-GIIHRDLAARNVLIGENHCCKVADFGFAR 157
K+ + + L V +G+ +L + I+HRD+ N+L+ K+ DFG +
Sbjct: 97 ---KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG 153
Query: 158 DL---MTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
L M +S +S +M+PE L +SV+SDIWS G+ + E+ +G P P
Sbjct: 154 QLIDSMANSFVGTRS-------YMSPERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPIPP 205
Query: 215 MAAAEV 220
A E+
Sbjct: 206 PDAKEL 211
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 93/191 (48%), Gaps = 27/191 (14%)
Query: 27 VKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF 86
+ T K +A + ++L+ +E + + L HPN+VRL E+ +++ + V G+L
Sbjct: 39 INTKKLSARDFQKLE--REARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGEL--- 92
Query: 87 LRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI---G 143
A+ +Y + D + Q+ + + S GI+HR+L N+L+
Sbjct: 93 FEDIVAREFY----------SEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA 142
Query: 144 ENHCCKVADFGFARDLMTSSVYE--RKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ K+ADFG A ++ S + + G +++PE L + +S DIW+ GV++
Sbjct: 143 KGAAVKLADFGLAIEVNDSEAWHGFAGTPG-----YLSPEVLKKDPYSKPVDIWACGVIL 197
Query: 202 WEIVTLGSTPY 212
+ I+ +G P+
Sbjct: 198 Y-ILLVGYPPF 207
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 26/186 (13%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R +++EL V+ + P +V G + ME++ G L L+
Sbjct: 48 RNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---------- 96
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSR-GIIHRDLAARNVLIGENHCCKVADFGFAR 157
K+ + + L V +G+ +L + I+HRD+ N+L+ K+ DFG +
Sbjct: 97 ---KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG 153
Query: 158 DL---MTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
L M +S +S +M+PE L +SV+SDIWS G+ + E+ +G P P
Sbjct: 154 QLIDSMANSFVGTRS-------YMSPERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPIPP 205
Query: 215 MAAAEV 220
A E+
Sbjct: 206 PDAKEL 211
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIM 75
VA+K L +N +R +EL +MK ++ H N++ LL T E + +++M
Sbjct: 90 VAIKKLSRPFQNQTHAKRA--YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVM 146
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E + Q +R ++ YQ+ G++ L S GIIHRDL
Sbjct: 147 ELMDANLCQVIQMELDHER----------------MSYLLYQMLCGIKHLHSAGIIHRDL 190
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ DFG AR TS + R + APE + + DIW
Sbjct: 191 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDIW 247
Query: 196 SFGVLIWEIV 205
S G ++ E+V
Sbjct: 248 SVGCIMGEMV 257
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 93/191 (48%), Gaps = 27/191 (14%)
Query: 27 VKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF 86
+ T K +A + ++L+ +E + + L HPN+VRL E+ +++ + V G+L
Sbjct: 39 INTKKLSARDFQKLE--REARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGEL--- 92
Query: 87 LRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI---G 143
A+ +Y+ D + Q+ + + S GI+HR+L N+L+
Sbjct: 93 FEDIVAREFYSEA----------DASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA 142
Query: 144 ENHCCKVADFGFARDLMTSSVYE--RKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLI 201
+ K+ADFG A ++ S + + G +++PE L + +S DIW+ GV++
Sbjct: 143 KGAAVKLADFGLAIEVNDSEAWHGFAGTPG-----YLSPEVLKKDPYSKPVDIWACGVIL 197
Query: 202 WEIVTLGSTPY 212
+ I+ +G P+
Sbjct: 198 Y-ILLVGYPPF 207
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 26/186 (13%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R +++EL V+ + P +V G + ME++ G L L+
Sbjct: 48 RNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---------- 96
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSR-GIIHRDLAARNVLIGENHCCKVADFGFAR 157
K+ + + L V +G+ +L + I+HRD+ N+L+ K+ DFG +
Sbjct: 97 ---KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG 153
Query: 158 DL---MTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
L M +S +S +M+PE L +SV+SDIWS G+ + E+ +G P P
Sbjct: 154 QLIDSMANSFVGTRS-------YMSPERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPIPP 205
Query: 215 MAAAEV 220
A E+
Sbjct: 206 PDAKEL 211
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 33/199 (16%)
Query: 26 AVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT-------EKEPFFVIMEYV 78
A+K L N E+ R ++QE+ MK L HPN+V+ + + F+++ +
Sbjct: 57 ALKRLLSNEEEKNRA-IIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTEL 115
Query: 79 PYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRG--IIHRDLA 136
G+L FL+ ++ L+ + YQ R +Q + + IIHRDL
Sbjct: 116 CKGQLVEFLKKMESR----------GPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLK 165
Query: 137 ARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIR----------WMAPE--SLY 184
N+L+ K+ DFG A + Y ++ R + + PE LY
Sbjct: 166 VENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLY 225
Query: 185 DNI-FSVKSDIWSFGVLIW 202
N K DIW+ G +++
Sbjct: 226 SNFPIGEKQDIWALGCILY 244
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 26/186 (13%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R +++EL V+ + P +V G + ME++ G L L+
Sbjct: 48 RNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---------- 96
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSR-GIIHRDLAARNVLIGENHCCKVADFGFAR 157
K+ + + L V +G+ +L + I+HRD+ N+L+ K+ DFG +
Sbjct: 97 ---KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG 153
Query: 158 DL---MTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
L M +S +S +M+PE L +SV+SDIWS G+ + E+ +G P P
Sbjct: 154 QLIDSMANSFVGTRS-------YMSPERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPIPP 205
Query: 215 MAAAEV 220
A E+
Sbjct: 206 PDAKEL 211
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 26/185 (14%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R +++EL V+ + P +V G + ME++ G L L+
Sbjct: 48 RNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---------- 96
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSR-GIIHRDLAARNVLIGENHCCKVADFGFAR 157
K+ + + L V +G+ +L + I+HRD+ N+L+ K+ DFG +
Sbjct: 97 ---KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG 153
Query: 158 DL---MTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
L M +S +S +M+PE L +SV+SDIWS G+ + E+ +G P P
Sbjct: 154 QLIDSMANSFVGTRS-------YMSPERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPIPP 205
Query: 215 MAAAE 219
A E
Sbjct: 206 PDAKE 210
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIM 75
VA+K L +N +R +EL +MK ++ H N++ LL T E + +++M
Sbjct: 46 VAIKKLSRPFQNQTHAKRA--YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVM 102
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E + Q +R ++ YQ+ G++ L S GIIHRDL
Sbjct: 103 ELMDANLCQVIQMELDHER----------------MSYLLYQMLCGIKHLHSAGIIHRDL 146
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ DFG AR TS + R + APE + + DIW
Sbjct: 147 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDIW 203
Query: 196 SFGVLIWEIV 205
S G ++ E+V
Sbjct: 204 SVGCIMGEMV 213
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIM 75
VA+K L +N +R +EL +MK ++ H N++ LL T E + +++M
Sbjct: 90 VAIKKLSRPFQNQTHAKRA--YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVM 146
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E + Q +R ++ YQ+ G++ L S GIIHRDL
Sbjct: 147 ELMDANLCQVIQMELDHER----------------MSYLLYQMLCGIKHLHSAGIIHRDL 190
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ DFG AR TS + R + APE + + DIW
Sbjct: 191 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDIW 247
Query: 196 SFGVLIWEIV 205
S G ++ E+V
Sbjct: 248 SVGCIMGEMV 257
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIM 75
VA+K L +N +R +EL +MK ++ H N++ LL T E + +++M
Sbjct: 51 VAIKKLSRPFQNQTHAKRA--YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVM 107
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E + Q +R ++ YQ+ G++ L S GIIHRDL
Sbjct: 108 ELMDANLCQVIQMELDHER----------------MSYLLYQMLCGIKHLHSAGIIHRDL 151
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ DFG AR TS + R + APE + + DIW
Sbjct: 152 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDIW 208
Query: 196 SFGVLIWEIV 205
S G ++ E+V
Sbjct: 209 SVGCIMGEMV 218
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 117 QVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFA---------RDLMTSSVYER 167
Q+A ++FL S+G++HRDL N+ + KV DFG + ++T
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 168 KSEGRLPIR-WMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGST 210
G++ + +M+PE ++ N +S K DI+S G++++E++ ST
Sbjct: 232 THXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFST 275
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 102 KSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT 161
K L++ + F YQ+ RG++++ S ++HRDL N+L+ K+ DFG AR
Sbjct: 121 KCQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180
Query: 162 SSVYERKSEGRLPIRWM-APESLYDNIFSVKS-DIWSFGVLIWEIVT 206
+ + RW APE + ++ KS DIWS G ++ E+++
Sbjct: 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIM 75
VA+K L +N +R +EL +MK ++ H N++ LL T E + +++M
Sbjct: 53 VAIKKLSRPFQNQTHAKRA--YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVM 109
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E + Q +R ++ YQ+ G++ L S GIIHRDL
Sbjct: 110 ELMDANLCQVIQMELDHER----------------MSYLLYQMLCGIKHLHSAGIIHRDL 153
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ DFG AR TS + R + APE + + DIW
Sbjct: 154 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDIW 210
Query: 196 SFGVLIWEIV 205
S G ++ E+V
Sbjct: 211 SVGCIMGEMV 220
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIM 75
VA+K L +N +R +EL +MK ++ H N++ LL T E + +++M
Sbjct: 46 VAIKKLSRPFQNQTHAKRA--YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVM 102
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E + Q +R ++ YQ+ G++ L S GIIHRDL
Sbjct: 103 ELMDANLCQVIQMELDHER----------------MSYLLYQMLCGIKHLHSAGIIHRDL 146
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ DFG AR TS + R + APE + + DIW
Sbjct: 147 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDIW 203
Query: 196 SFGVLIWEIV 205
S G ++ E+V
Sbjct: 204 SVGCIMGEMV 213
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIM 75
VA+K L +N +R +EL +MK ++ H N++ LL T E + +++M
Sbjct: 53 VAIKKLSRPFQNQTHAKRA--YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVM 109
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E + Q +R ++ YQ+ G++ L S GIIHRDL
Sbjct: 110 ELMDANLCQVIQMELDHER----------------MSYLLYQMLCGIKHLHSAGIIHRDL 153
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ DFG AR TS + R + APE + + DIW
Sbjct: 154 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDIW 210
Query: 196 SFGVLIWEIV 205
S G ++ E+V
Sbjct: 211 SVGCIMGEMV 220
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEY P G++ S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N++I + +V DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIM 75
VA+K L +N +R +EL +MK ++ H N++ LL T E + +++M
Sbjct: 45 VAIKKLSRPFQNQTHAKRA--YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVM 101
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E + Q +R ++ YQ+ G++ L S GIIHRDL
Sbjct: 102 ELMDANLCQVIQMELDHER----------------MSYLLYQMLCGIKHLHSAGIIHRDL 145
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ DFG AR TS + R + APE + + DIW
Sbjct: 146 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDIW 202
Query: 196 SFGVLIWEIV 205
S G ++ E+V
Sbjct: 203 SVGCIMGEMV 212
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIM 75
VA+K L +N +R +EL +MK ++ H N++ LL T E + +++M
Sbjct: 52 VAIKKLSRPFQNQTHAKRA--YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E + Q +R ++ YQ+ G++ L S GIIHRDL
Sbjct: 109 ELMDANLCQVIQMELDHER----------------MSYLLYQMLCGIKHLHSAGIIHRDL 152
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ DFG AR TS + R + APE + + DIW
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDIW 209
Query: 196 SFGVLIWEIV 205
S G ++ E+V
Sbjct: 210 SVGCIMGEMV 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIM 75
VA+K L +N +R +EL +MK ++ H N++ LL T E + +++M
Sbjct: 52 VAIKKLSRPFQNQTHAKRA--YRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E + Q +R ++ YQ+ G++ L S GIIHRDL
Sbjct: 109 ELMDANLCQVIQMELDHER----------------MSYLLYQMLCGIKHLHSAGIIHRDL 152
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ DFG AR TS + R + APE + + DIW
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDIW 209
Query: 196 SFGVLIWEIV 205
S G ++ E+V
Sbjct: 210 SVGCIMGEMV 219
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 29/189 (15%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
VAVK L +N +R +EL ++K ++ H N++ LL T P + E+
Sbjct: 52 VAVKKLSRPFQNQTHAKRA--YRELVLLKCVN-HKNIISLLNVFT---PQKTLEEFQDVY 105
Query: 82 KLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL 141
+ + ++ Q + L ++ YQ+ G++ L S GIIHRDL N++
Sbjct: 106 LVMELMDANLCQVIHM-------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 142 IGENHCCKVADFGFARD-----LMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWS 196
+ + K+ DFG AR +MT V R + APE + ++ DIWS
Sbjct: 159 VKSDCTLKILDFGLARTACTNFMMTPYVVTR--------YYRAPEVILGMGYAANVDIWS 210
Query: 197 FGVLIWEIV 205
G ++ E+V
Sbjct: 211 VGCIMGELV 219
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 25/200 (12%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
R ++ +VAVK ++ GE+ ++ +E+ ++L HPN+VR ++ME
Sbjct: 39 RDKQSNELVAVKYIER--GEKIAANVKREIINHRSLR-HPNIVRFKEVILTPTHLAIVME 95
Query: 77 YVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCY-QVARGMQFLSSRGIIHRDL 135
Y G+L F R A R+ S D F + Q+ G+ + + + HRDL
Sbjct: 96 YASGGEL--FERICNAGRF------------SEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 136 AARNVLIGENHC--CKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVK-S 192
N L+ + K+ DFG+++ + S + KS P ++APE L + K +
Sbjct: 142 KLENTLLDGSPAPRLKICDFGYSKSSVLHS--QPKSTVGTP-AYIAPEVLLKKEYDGKVA 198
Query: 193 DIWSFGVLIWEIVTLGSTPY 212
D+WS GV ++ ++ +G+ P+
Sbjct: 199 DVWSCGVTLY-VMLVGAYPF 217
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 30/175 (17%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P + +L + +++MEY P G++ S LR R R+ + H +
Sbjct: 90 LNEKRILQAVN-FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR--RIGRF-SEPHAR 145
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N++I + KV DFGFA
Sbjct: 146 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA------ 189
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 190 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPF 239
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 30/175 (17%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P + +L + +++MEY P G++ S LR R R+ + H +
Sbjct: 90 LNEKRILQAVN-FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR--RIGRF-SEPHAR 145
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N++I + KV DFGFA
Sbjct: 146 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA------ 189
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 190 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPF 239
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 22/178 (12%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E+ +++ D HPNV+R CTEK+ F +Y+ + L+ Q+ + ++ +
Sbjct: 66 REVQLLRESDEHPNVIRYF--CTEKDRQF---QYIAIELCAATLQEYVEQKDFAHLGLEP 120
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHC-----CKVADFGFARD 158
+L Q G+ L S I+HRDL N+LI + ++DFG +
Sbjct: 121 ITLLQ--------QTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172
Query: 159 LMTS-SVYERKSEGRLPIRWMAPESLYDNIF---SVKSDIWSFGVLIWEIVTLGSTPY 212
L + R+S W+APE L ++ + DI+S G + + +++ GS P+
Sbjct: 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF 230
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 20/181 (11%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYV G++ S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA+
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 163 SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMK 222
V R ++APE + ++ D W+ GVLI+E+ G P+ ++ +
Sbjct: 190 RVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 223 K 223
K
Sbjct: 249 K 249
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 42/204 (20%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIM 75
VAVK L +N +R +EL ++K ++ H N++ LL T E + +++M
Sbjct: 50 VAVKKLSRPFQNQTHAKRA--YRELVLLKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVM 106
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E + Q +R ++ YQ+ G++ L S GIIHRDL
Sbjct: 107 ELMDANLCQVIHMELDHER----------------MSYLLYQMLCGIKHLHSAGIIHRDL 150
Query: 136 AARNVLIGENHCCKVADFGFARD-----LMTSSVYERKSEGRLPIRWMAPESLYDNIFSV 190
N+++ + K+ DFG AR +MT V R + APE + +
Sbjct: 151 KPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTR--------YYRAPEVILGMGYKE 202
Query: 191 KSDIWSFGVLIWEIVTLGSTPYPG 214
DIWS G ++ E+V GS + G
Sbjct: 203 NVDIWSVGCIMGELVK-GSVIFQG 225
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYV G++ S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ + YP A
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM----AAGYPPFFA 240
Query: 218 AE 219
E
Sbjct: 241 DE 242
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 8 VRKHPMSPERGREGPCIVAVKTLKENA-GERERLDLLQELTVMKTLDPHPNVVRLLGCCT 66
V + +S G+E A K LK+ G+ R ++L E+ V++ P V+ L
Sbjct: 44 VVRQCISKSTGQE----YAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99
Query: 67 EKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLS 126
+I+EY G++ S A+ N D+ Q+ G+ +L
Sbjct: 100 NTSEIILILEYAAGGEIFSLCLPELAEMVSEN-----------DVIRLIKQILEGVYYLH 148
Query: 127 SRGIIHRDLAARNVLIGENH---CCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESL 183
I+H DL +N+L+ + K+ DFG +R + E + P ++APE L
Sbjct: 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI--GHACELREIMGTP-EYLAPEIL 205
Query: 184 YDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
+ + +D+W+ G++ + ++T ++P+ G
Sbjct: 206 NYDPITTATDMWNIGIIAYMLLT-HTSPFVG 235
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 20/181 (11%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYV G++ S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA+
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 163 SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMK 222
V R ++APE + ++ D W+ GVLI+E+ G P+ ++ +
Sbjct: 190 RVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYE 248
Query: 223 K 223
K
Sbjct: 249 K 249
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYV G++ S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYV G++ S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYV G++ S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYV G++ S LR R R+ + H +
Sbjct: 90 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRF-SEPHAR 145
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 146 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 189
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 190 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 244
Query: 218 AEVMKK 223
++ +K
Sbjct: 245 IQIYEK 250
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYV G++ S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 78/177 (44%), Gaps = 27/177 (15%)
Query: 55 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 114
H ++V G C + ++ E+V +G L ++L+ ++ N +
Sbjct: 71 HKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNK------------NCINILWKLEV 118
Query: 115 CYQVARGMQFLSSRGIIHRDLAARNVLI--------GENHCCKVADFGFARDLMTSSVYE 166
Q+A M FL +IH ++ A+N+L+ G K++D G + ++ + +
Sbjct: 119 AKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQ 178
Query: 167 RKSEGRLPIRWMAPESLYD-NIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMK 222
+ I W+ PE + + ++ +D WSFG +WEI + G P + + ++
Sbjct: 179 ER------IPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQ 229
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYV G++ S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 25/200 (12%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
R ++ +VAVK ++ GE+ ++ +E+ ++L HPN+VR ++ME
Sbjct: 38 RDKQSNELVAVKYIER--GEKIDENVKREIINHRSLR-HPNIVRFKEVILTPTHLAIVME 94
Query: 77 YVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCY-QVARGMQFLSSRGIIHRDL 135
Y G+L F R A R+ S D F + Q+ G+ + + + HRDL
Sbjct: 95 YASGGEL--FERICNAGRF------------SEDEARFFFQQLISGVSYCHAMQVCHRDL 140
Query: 136 AARNVLIGENHC--CKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVK-S 192
N L+ + K+ DFG+++ + S + KS P ++APE L + K +
Sbjct: 141 KLENTLLDGSPAPRLKICDFGYSKSSVLHS--QPKSTVGTP-AYIAPEVLLKKEYDGKVA 197
Query: 193 DIWSFGVLIWEIVTLGSTPY 212
D+WS GV ++ ++ +G+ P+
Sbjct: 198 DVWSCGVTLY-VMLVGAYPF 216
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIM 75
VA+K L +N +R +EL +MK ++ H N++ LL T E + +++M
Sbjct: 57 VAIKKLSRPFQNQTHAKRA--YRELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVM 113
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E + Q +R ++ YQ+ G++ L S GIIHRDL
Sbjct: 114 ELMDANLCQVIQMELDHER----------------MSYLLYQMLCGIKHLHSAGIIHRDL 157
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ DFG AR TS + R + APE + + D+W
Sbjct: 158 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDLW 214
Query: 196 SFGVLIWEIV 205
S G ++ E+V
Sbjct: 215 SVGCIMGEMV 224
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 21/161 (13%)
Query: 55 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 114
HP V+RLL +E F +++E R AQ ++ + K L F
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLE-----------RPLPAQDLFDYITEK-GPLGEGPSRCF 144
Query: 115 CYQVARGMQFLSSRGIIHRDLAARNVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRL 173
QV +Q SRG++HRD+ N+LI C K+ DFG + L+ Y R+
Sbjct: 145 FGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG-SGALLHDEPYTDFDGTRV 203
Query: 174 --PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
P W++ + ++ + +WS G+L++++V G P+
Sbjct: 204 YSPPEWISRHQYH----ALPATVWSLGILLYDMVC-GDIPF 239
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 99/206 (48%), Gaps = 28/206 (13%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL----LGCCTEKEPFFV--IMEY 77
+VA+K + + + R EL +M+ LD H N+VRL +K+ ++ +++Y
Sbjct: 47 LVAIKKVLQGKAFKNR-----ELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDY 100
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
VP + SRA++ ++ K + YQ+ R + ++ S GI HRD+
Sbjct: 101 VPATVYRVARHYSRAKQTLPVIYVKL----------YMYQLFRSLAYIHSFGICHRDIKP 150
Query: 138 RNVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI-FSVKSDIW 195
+N+L+ + K+ DFG A+ L+ R + APE ++ ++ D+W
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---YRAPELIFGATDYTSSIDVW 207
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
S G ++ E++ LG +PG + + +
Sbjct: 208 SAGCVLAELL-LGQPIFPGDSGVDQL 232
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
++ +E+ + K L+ H NVV+ G E ++ +EY G+L +
Sbjct: 51 NIKKEIXINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------- 101
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ D F +Q+ G+ +L GI HRD+ N+L+ E K++DFG A +
Sbjct: 102 -----MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VF 155
Query: 161 TSSVYER---KSEGRLPIRWMAPESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTPY 212
+ ER K G LP ++APE L F + D+WS G+++ ++ G P+
Sbjct: 156 RYNNRERLLNKMXGTLP--YVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPW 208
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 25 VAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCT------EKEPFFVIM 75
VA+K L +N +R +EL +MK ++ H N++ LL T E + +++M
Sbjct: 46 VAIKKLSRPFQNQTHAKRA--YRELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVM 102
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E + Q +R ++ YQ+ G++ L S GIIHRDL
Sbjct: 103 ELMDANLCQVIQMELDHER----------------MSYLLYQMLCGIKHLHSAGIIHRDL 146
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+++ + K+ DFG AR TS + R + APE + + D+W
Sbjct: 147 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY---YRAPEVILGMGYKENVDLW 203
Query: 196 SFGVLIWEIV 205
S G ++ E+V
Sbjct: 204 SVGCIMGEMV 213
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 30/175 (17%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P + +L + +++MEY P G++ S LR R R+ H +
Sbjct: 90 LNEKRILQAVN-FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR--RIGRF-XEPHAR 145
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N++I + KV DFGFA
Sbjct: 146 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA------ 189
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 190 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPF 239
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 27/198 (13%)
Query: 25 VAVKTLK-ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
VA+K ++ E+ E ++E++++K L H N++ L +I EY
Sbjct: 62 VAIKRIRLEHEEEGVPGTAIREVSLLKELQ-HRNIIELKSVIHHNHRLHLIFEYA----- 115
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI- 142
+ ++Y + K+ ++ R + SF YQ+ G+ F SR +HRDL +N+L+
Sbjct: 116 -----ENDLKKYMD----KNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLS 166
Query: 143 ----GENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPES--LYDNIFSVKSDIWS 196
E K+ DFG AR + R+ + W P L +S DIWS
Sbjct: 167 VSDASETPVLKIGDFGLARAF---GIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWS 223
Query: 197 FGVLIWEIVTLGSTPYPG 214
IW + + + +PG
Sbjct: 224 IAC-IWAEMLMKTPLFPG 240
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
++ +E+ + K L+ H NVV+ G E ++ +EY G+L +
Sbjct: 50 NIKKEIXINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------- 100
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ D F +Q+ G+ +L GI HRD+ N+L+ E K++DFG A +
Sbjct: 101 -----MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VF 154
Query: 161 TSSVYER---KSEGRLPIRWMAPESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTPY 212
+ ER K G LP ++APE L F + D+WS G+++ ++ G P+
Sbjct: 155 RYNNRERLLNKMXGTLP--YVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPW 207
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 20/199 (10%)
Query: 16 ERGREGPC--IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFV 73
E+ R P I AVK ++ +E+ LL +L + P V G + ++
Sbjct: 51 EKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWI 110
Query: 74 IMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR-GIIH 132
E L + ++Y + K ++ L + + ++ L S+ +IH
Sbjct: 111 CXE----------LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIH 160
Query: 133 RDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI----F 188
RD+ NVLI K DFG + + V + G P + APE + + +
Sbjct: 161 RDVKPSNVLINALGQVKXCDFGIS-GYLVDDVAKDIDAGCKP--YXAPERINPELNQKGY 217
Query: 189 SVKSDIWSFGVLIWEIVTL 207
SVKSDIWS G+ E+ L
Sbjct: 218 SVKSDIWSLGITXIELAIL 236
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 30/181 (16%)
Query: 57 NVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCY 116
N V+ + +K F+ MEY L Y+ +H ++ + +
Sbjct: 76 NFVKPMTAVKKKSTLFIQMEYCENRTL------------YDLIHSENLNQQRDEYWRLFR 123
Query: 117 QVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLP-- 174
Q+ + ++ S+GIIHRDL N+ I E+ K+ DFG A+++ S + LP
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 175 ----------IRWMAPESLYDNI--FSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEVMK 222
++A E L D ++ K D++S G++ +E++ ST GM ++K
Sbjct: 184 SDNLTSAIGTAMYVATEVL-DGTGHYNEKIDMYSLGIIFFEMIYPFST---GMERVNILK 239
Query: 223 K 223
K
Sbjct: 240 K 240
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 30/175 (17%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEY P G++ S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N++I + KV DFG A
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYV G++ S LR R R+ H +
Sbjct: 84 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRF-XEPHAR 139
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 140 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 183
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 184 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 238
Query: 218 AEVMKK 223
++ +K
Sbjct: 239 IQIYEK 244
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYV G++ S LR R R+ H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRF-XEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
++ +E+ + K L+ H NVV+ G E ++ +EY G+L +
Sbjct: 50 NIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------- 100
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ D F +Q+ G+ +L GI HRD+ N+L+ E K++DFG A +
Sbjct: 101 -----MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VF 154
Query: 161 TSSVYER---KSEGRLPIRWMAPESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTPY 212
+ ER K G LP ++APE L F + D+WS G+++ ++ G P+
Sbjct: 155 RYNNRERLLNKMXGTLP--YVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPW 207
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYV G++ S LR R R+ H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRF-XEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 30/175 (17%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYV G++ S LR R R+ H +
Sbjct: 110 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRF-XEPHAR 165
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 166 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 209
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 210 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPF 259
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 22/186 (11%)
Query: 31 KENAGERERL-DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRS 89
K+ ER + ++ +EL +M+ L+ HP +V L ++E F++++ + G L+ L+
Sbjct: 50 KQKCVERNEVRNVFKELQIMQGLE-HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQ 108
Query: 90 SRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCK 149
N+H K ++ F ++ + +L ++ IIHRD+ N+L+ E+
Sbjct: 109 --------NVHFKEETVKL-----FICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVH 155
Query: 150 VADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI---FSVKSDIWSFGVLIWEIVT 206
+ DF A ++ G P +MAPE +S D WS GV +E++
Sbjct: 156 ITDFNIAA-MLPRETQITTMAGTKP--YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLR 212
Query: 207 LGSTPY 212
G PY
Sbjct: 213 -GRRPY 217
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
++ +E+ + K L+ H NVV+ G E ++ +EY G+L +
Sbjct: 50 NIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------- 100
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ D F +Q+ G+ +L GI HRD+ N+L+ E K++DFG A +
Sbjct: 101 -----MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VF 154
Query: 161 TSSVYER---KSEGRLPIRWMAPESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTPY 212
+ ER K G LP ++APE L F + D+WS G+++ ++ G P+
Sbjct: 155 RYNNRERLLNKMXGTLP--YVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPW 207
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL----LGCCTEKEPFFV--IMEY 77
+VA+K + ++ + R EL +M+ LD H N+VRL +K+ ++ +++Y
Sbjct: 59 LVAIKKVLQDKRFKNR-----ELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDY 112
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
VP + SRA++ ++ K + YQ+ R + ++ S GI HRD+
Sbjct: 113 VPETVYRVARHYSRAKQTLPVIYVKL----------YMYQLFRSLAYIHSFGICHRDIKP 162
Query: 138 RNVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI-FSVKSDIW 195
+N+L+ + K+ DFG A+ L+ R + APE ++ ++ D+W
Sbjct: 163 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---YRAPELIFGATDYTSSIDVW 219
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
S G ++ E++ LG +PG + + +
Sbjct: 220 SAGCVLAELL-LGQPIFPGDSGVDQL 244
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 84/170 (49%), Gaps = 20/170 (11%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYV G++ S LR R R+ + H +
Sbjct: 110 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRF-SEPHAR 165
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA+ + +
Sbjct: 166 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA 215
Query: 163 SVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
+ + P ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 216 TW----TLCGTP-EYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPF 259
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 84/160 (52%), Gaps = 19/160 (11%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E++ ++ L HP++++L K+ +++EY +L ++ QR
Sbjct: 63 REISYLRLLR-HPHIIKLYDVIKSKDEIIMVIEYAG-NELFDYI----VQR--------- 107
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ ++ ++ F Q+ +++ I+HRDL N+L+ E+ K+ADFG + ++MT
Sbjct: 108 DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDG 166
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFS-VKSDIWSFGVLIW 202
+ + S G P + APE + +++ + D+WS GV+++
Sbjct: 167 NFLKTSCGS-P-NYAAPEVISGKLYAGPEVDVWSCGVILY 204
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL----LGCCTEKEPFFV--IMEY 77
+VA+K + ++ + R EL +M+ LD H N+VRL +K+ ++ +++Y
Sbjct: 55 LVAIKKVLQDKRFKNR-----ELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDY 108
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
VP + SRA++ ++ K + YQ+ R + ++ S GI HRD+
Sbjct: 109 VPETVYRVARHYSRAKQTLPVIYVKL----------YMYQLFRSLAYIHSFGICHRDIKP 158
Query: 138 RNVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI-FSVKSDIW 195
+N+L+ + K+ DFG A+ L+ R + APE ++ ++ D+W
Sbjct: 159 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---YRAPELIFGATDYTSSIDVW 215
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
S G ++ E++ LG +PG + + +
Sbjct: 216 SAGCVLAELL-LGQPIFPGDSGVDQL 240
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 84/160 (52%), Gaps = 19/160 (11%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E++ ++ L HP++++L K+ +++EY +L ++ QR
Sbjct: 53 REISYLRLLR-HPHIIKLYDVIKSKDEIIMVIEYAG-NELFDYI----VQR--------- 97
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ ++ ++ F Q+ +++ I+HRDL N+L+ E+ K+ADFG + ++MT
Sbjct: 98 DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDG 156
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFS-VKSDIWSFGVLIW 202
+ + S G P + APE + +++ + D+WS GV+++
Sbjct: 157 NFLKTSCGS-P-NYAAPEVISGKLYAGPEVDVWSCGVILY 194
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL----LGCCTEKEPFFV--IMEY 77
+VA+K + ++ + R EL +M+ LD H N+VRL +K+ ++ +++Y
Sbjct: 48 LVAIKKVLQDKRFKNR-----ELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDY 101
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
VP + SRA++ ++ K + YQ+ R + ++ S GI HRD+
Sbjct: 102 VPETVYRVARHYSRAKQTLPVIYVKL----------YMYQLFRSLAYIHSFGICHRDIKP 151
Query: 138 RNVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI-FSVKSDIW 195
+N+L+ + K+ DFG A+ L+ R + APE ++ ++ D+W
Sbjct: 152 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---YRAPELIFGATDYTSSIDVW 208
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
S G ++ E++ LG +PG + + +
Sbjct: 209 SAGCVLAELL-LGQPIFPGDSGVDQL 233
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 30/206 (14%)
Query: 25 VAVKTLKENAGERER-LDLLQELTVMKTLDPHPNVVRL------LGCCTEKEPFF-VIME 76
VA+K + ++ R R L ++Q+L V+ HPN+V+L LG ++ + V+ME
Sbjct: 51 VAIKKVIQDPRFRNRELQIMQDLAVLH----HPNIVQLQSYFYTLGERDRRDIYLNVVME 106
Query: 77 YVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVAR--GMQFLSSRGIIHRD 134
YVP + R R YY L + F +Q+ R G L S + HRD
Sbjct: 107 YVP----DTLHRCCR--NYYRRQVAPPPIL----IKVFLFQLIRSIGCLHLPSVNVCHRD 156
Query: 135 LAARNVLIGE-NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI-FSVKS 192
+ NVL+ E + K+ DFG A+ L S R + APE ++ N ++
Sbjct: 157 IKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY---YRAPELIFGNQHYTTAV 213
Query: 193 DIWSFGVLIWEIVTLGSTPYPGMAAA 218
DIWS G + E++ LG + G +A
Sbjct: 214 DIWSVGCIFAEMM-LGEPIFRGDNSA 238
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL----LGCCTEKEPFFV--IMEY 77
+VA+K + ++ + R EL +M+ LD H N+VRL +K+ ++ +++Y
Sbjct: 47 LVAIKKVLQDKRFKNR-----ELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDY 100
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
VP + SRA++ ++ K + YQ+ R + ++ S GI HRD+
Sbjct: 101 VPETVYRVARHYSRAKQTLPVIYVKL----------YMYQLFRSLAYIHSFGICHRDIKP 150
Query: 138 RNVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI-FSVKSDIW 195
+N+L+ + K+ DFG A+ L+ R + APE ++ ++ D+W
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---YRAPELIFGATDYTSSIDVW 207
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
S G ++ E++ LG +PG + + +
Sbjct: 208 SAGCVLAELL-LGQPIFPGDSGVDQL 232
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL----LGCCTEKEPFFV--IMEY 77
+VA+K + ++ + R EL +M+ LD H N+VRL +K+ ++ +++Y
Sbjct: 66 LVAIKKVLQDKRFKNR-----ELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDY 119
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
VP + SRA++ ++ K + YQ+ R + ++ S GI HRD+
Sbjct: 120 VPETVYRVARHYSRAKQTLPVIYVKL----------YMYQLFRSLAYIHSFGICHRDIKP 169
Query: 138 RNVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI-FSVKSDIW 195
+N+L+ + K+ DFG A+ L+ R + APE ++ ++ D+W
Sbjct: 170 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---YRAPELIFGATDYTSSIDVW 226
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
S G ++ E++ LG +PG + + +
Sbjct: 227 SAGCVLAELL-LGQPIFPGDSGVDQL 251
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL----LGCCTEKEPFFV--IMEY 77
+VA+K + ++ + R EL +M+ LD H N+VRL +K+ ++ +++Y
Sbjct: 59 LVAIKKVLQDKRFKNR-----ELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDY 112
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
VP + SRA++ ++ K + YQ+ R + ++ S GI HRD+
Sbjct: 113 VPETVYRVARHYSRAKQTLPVIYVKL----------YMYQLFRSLAYIHSFGICHRDIKP 162
Query: 138 RNVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI-FSVKSDIW 195
+N+L+ + K+ DFG A+ L+ R + APE ++ ++ D+W
Sbjct: 163 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---YRAPELIFGATDYTSSIDVW 219
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
S G ++ E++ LG +PG + + +
Sbjct: 220 SAGCVLAELL-LGQPIFPGDSGVDQL 244
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 84/160 (52%), Gaps = 19/160 (11%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E++ ++ L HP++++L K+ +++EY +L ++ QR
Sbjct: 62 REISYLRLLR-HPHIIKLYDVIKSKDEIIMVIEYAG-NELFDYI----VQR--------- 106
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ ++ ++ F Q+ +++ I+HRDL N+L+ E+ K+ADFG + ++MT
Sbjct: 107 DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDG 165
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFS-VKSDIWSFGVLIW 202
+ + S G P + APE + +++ + D+WS GV+++
Sbjct: 166 NFLKTSCGS-P-NYAAPEVISGKLYAGPEVDVWSCGVILY 203
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 84/160 (52%), Gaps = 19/160 (11%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E++ ++ L HP++++L K+ +++EY +L ++ QR
Sbjct: 57 REISYLRLLR-HPHIIKLYDVIKSKDEIIMVIEYAG-NELFDYI----VQR--------- 101
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSS 163
+ ++ ++ F Q+ +++ I+HRDL N+L+ E+ K+ADFG + ++MT
Sbjct: 102 DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDG 160
Query: 164 VYERKSEGRLPIRWMAPESLYDNIFS-VKSDIWSFGVLIW 202
+ + S G P + APE + +++ + D+WS GV+++
Sbjct: 161 NFLKTSCGS-P-NYAAPEVISGKLYAGPEVDVWSCGVILY 198
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYV G++ S LR R R+ H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRF-XEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL----LGCCTEKEPFFV--IMEY 77
+VA+K + ++ + R EL +M+ LD H N+VRL +K+ ++ +++Y
Sbjct: 47 LVAIKKVLQDKRFKNR-----ELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDY 100
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
VP + SRA++ ++ K + YQ+ R + ++ S GI HRD+
Sbjct: 101 VPETVYRVARHYSRAKQTLPVIYVKL----------YMYQLFRSLAYIHSFGICHRDIKP 150
Query: 138 RNVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI-FSVKSDIW 195
+N+L+ + K+ DFG A+ L+ R + APE ++ ++ D+W
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---YRAPELIFGATDYTSSIDVW 207
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
S G ++ E++ LG +PG + + +
Sbjct: 208 SAGCVLAELL-LGQPIFPGDSGVDQL 232
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL----LGCCTEKEPFFV--IMEY 77
+VA+K + ++ + R EL +M+ LD H N+VRL +K+ ++ +++Y
Sbjct: 51 LVAIKKVLQDKRFKNR-----ELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDY 104
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
VP + SRA++ ++ K + YQ+ R + ++ S GI HRD+
Sbjct: 105 VPETVYRVARHYSRAKQTLPVIYVKL----------YMYQLFRSLAYIHSFGICHRDIKP 154
Query: 138 RNVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI-FSVKSDIW 195
+N+L+ + K+ DFG A+ L+ R + APE ++ ++ D+W
Sbjct: 155 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---YRAPELIFGATDYTSSIDVW 211
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
S G ++ E++ LG +PG + + +
Sbjct: 212 SAGCVLAELL-LGQPIFPGDSGVDQL 236
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 99/206 (48%), Gaps = 28/206 (13%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL----LGCCTEKEPFFV--IMEY 77
+VA+K + + + R EL +M+ LD H N+VRL +K+ ++ +++Y
Sbjct: 47 LVAIKKVLQGKAFKNR-----ELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDY 100
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
VP + SRA++ ++ K + YQ+ R + ++ S GI HRD+
Sbjct: 101 VPETVYRVARHYSRAKQTLPVIYVKL----------YMYQLFRSLAYIHSFGICHRDIKP 150
Query: 138 RNVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI-FSVKSDIW 195
+N+L+ + K+ DFG A+ L+ R + APE ++ ++ D+W
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---YRAPELIFGATDYTSSIDVW 207
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
S G ++ E++ LG +PG + + +
Sbjct: 208 SAGCVLAELL-LGQPIFPGDSGVDQL 232
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYV G++ S LR R R+ H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRF-AEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYV G++ S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N++I + +V DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL----LGCCTEKEPFFV--IMEY 77
+VA+K + ++ + R EL +M+ LD H N+VRL +K+ ++ +++Y
Sbjct: 81 LVAIKKVLQDKRFKNR-----ELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDY 134
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
VP + SRA++ ++ K + YQ+ R + ++ S GI HRD+
Sbjct: 135 VPETVYRVARHYSRAKQTLPVIYVKL----------YMYQLFRSLAYIHSFGICHRDIKP 184
Query: 138 RNVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI-FSVKSDIW 195
+N+L+ + K+ DFG A+ L+ R + APE ++ ++ D+W
Sbjct: 185 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---YRAPELIFGATDYTSSIDVW 241
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
S G ++ E++ LG +PG + + +
Sbjct: 242 SAGCVLAELL-LGQPIFPGDSGVDQL 266
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
++ +E+ + K L+ H NVV+ G E ++ +EY G+L +
Sbjct: 50 NIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------- 100
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ D F +Q+ G+ +L GI HRD+ N+L+ E K++DFG A +
Sbjct: 101 -----MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VF 154
Query: 161 TSSVYER---KSEGRLPIRWMAPESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTPY 212
+ ER K G LP ++APE L F + D+WS G+++ ++ G P+
Sbjct: 155 RYNNRERLLNKMXGTLP--YVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPW 207
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 99/206 (48%), Gaps = 28/206 (13%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL----LGCCTEKEPFFV--IMEY 77
+VA+K + + + R EL +M+ LD H N+VRL +K+ ++ +++Y
Sbjct: 47 LVAIKKVLQGKAFKNR-----ELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDY 100
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
VP + SRA++ ++ K + YQ+ R + ++ S GI HRD+
Sbjct: 101 VPETVYRVARHYSRAKQTLPVIYVKL----------YMYQLFRSLAYIHSFGICHRDIKP 150
Query: 138 RNVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI-FSVKSDIW 195
+N+L+ + K+ DFG A+ L+ R + APE ++ ++ D+W
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---YRAPELIFGATDYTSSIDVW 207
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
S G ++ E++ LG +PG + + +
Sbjct: 208 SAGCVLAELL-LGQPIFPGDSGVDQL 232
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 28/206 (13%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL---LGCCTEKEPFF---VIMEY 77
+VA+K + ++ + R EL +M+ LD H N+VRL EK+ ++++Y
Sbjct: 47 LVAIKKVLQDKRFKNR-----ELQIMRKLD-HCNIVRLRYFFYSSGEKKDVVYLNLVLDY 100
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
VP + SRA++ ++ K + YQ+ R + ++ S GI HRD+
Sbjct: 101 VPETVYRVARHYSRAKQTLPVIYVKL----------YMYQLFRSLAYIHSFGICHRDIKP 150
Query: 138 RNVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI-FSVKSDIW 195
+N+L+ + K+ DFG A+ L+ R + APE ++ ++ D+W
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---YRAPELIFGATDYTSSIDVW 207
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
S G ++ E++ LG +PG + + +
Sbjct: 208 SAGCVLAELL-LGQPIFPGDSGVDQL 232
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYV G++ S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++APE + ++ D W+ GVLI+++ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL----LGCCTEKEPFFV--IMEY 77
+VA+K + ++ + R EL +M+ LD H N+VRL +K+ ++ +++Y
Sbjct: 47 LVAIKKVLQDKRFKNR-----ELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDY 100
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
VP + SRA++ ++ K + YQ+ R + ++ S GI HRD+
Sbjct: 101 VPETVYRVARHYSRAKQTLPVIYVKL----------YMYQLFRSLAYIHSFGICHRDIKP 150
Query: 138 RNVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI-FSVKSDIW 195
+N+L+ + K+ DFG A+ L+ R + APE ++ ++ D+W
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---YRAPELIFGATDYTSSIDVW 207
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
S G ++ E++ LG +PG + + +
Sbjct: 208 SAGCVLAELL-LGQPIFPGDSGVDQL 232
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ L+ + F YQ R ++ L +IHRDL N+LI N KV DFG AR + S
Sbjct: 106 TQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165
Query: 163 SVYERKSEGR-------LPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYP 213
+ + G+ + RW APE + + +S D+WS G ++ E+ L +P
Sbjct: 166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF-LRRPIFP 224
Query: 214 G 214
G
Sbjct: 225 G 225
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL----LGCCTEKEPFFV--IMEY 77
+VA+K + ++ + R EL +M+ LD H N+VRL +K+ ++ +++Y
Sbjct: 60 LVAIKKVLQDKRFKNR-----ELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDY 113
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
VP + SRA++ ++ K + YQ+ R + ++ S GI HRD+
Sbjct: 114 VPETVYRVARHYSRAKQTLPVIYVKL----------YMYQLFRSLAYIHSFGICHRDIKP 163
Query: 138 RNVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI-FSVKSDIW 195
+N+L+ + K+ DFG A+ L+ R + APE ++ ++ D+W
Sbjct: 164 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---YRAPELIFGATDYTSSIDVW 220
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
S G ++ E++ LG +PG + + +
Sbjct: 221 SAGCVLAELL-LGQPIFPGDSGVDQL 245
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ L+ + F YQ R ++ L +IHRDL N+LI N KV DFG AR + S
Sbjct: 106 TQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165
Query: 163 SVYERKSEGR-------LPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYP 213
+ + G+ + RW APE + + +S D+WS G ++ E+ L +P
Sbjct: 166 AADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF-LRRPIFP 224
Query: 214 G 214
G
Sbjct: 225 G 225
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 36/189 (19%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYV G++ S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 188
Query: 163 SVYERKSEGRLPIRW--------MAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
++ +GR W +APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGR---TWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFA 240
Query: 215 MAAAEVMKK 223
++ +K
Sbjct: 241 DQPIQIYEK 249
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ L+ + F YQ R ++ L +IHRDL N+LI N KV DFG AR + S
Sbjct: 106 TQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165
Query: 163 SVYERKSEGR-------LPIRWM-APESLYDNI-FSVKSDIWSFGVLIWEIVTLGSTPYP 213
+ + G+ + RW APE + + +S D+WS G ++ E+ L +P
Sbjct: 166 AADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF-LRRPIFP 224
Query: 214 G 214
G
Sbjct: 225 G 225
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 28/203 (13%)
Query: 25 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL----LGCCTEKEPFFV--IMEYV 78
VA+K + ++ + R EL +M+ + HPNVV L +K+ F+ ++EYV
Sbjct: 67 VAIKKVLQDKRFKNR-----ELQIMRIVK-HPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120
Query: 79 PYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAAR 138
P RA R+Y + L + + YQ+ R + ++ S GI HRD+ +
Sbjct: 121 PE-------TVYRASRHYAKLKQTMPMLL---IKLYMYQLLRSLAYIHSIGICHRDIKPQ 170
Query: 139 NVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI-FSVKSDIWS 196
N+L+ + K+ DFG A+ L+ R + APE ++ ++ DIWS
Sbjct: 171 NLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY---YRAPELIFGATNYTTNIDIWS 227
Query: 197 FGVLIWEIVTLGSTPYPGMAAAE 219
G ++ E++ G +PG + +
Sbjct: 228 TGCVMAELMQ-GQPLFPGESGID 249
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 25/193 (12%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
+VAVK ++ A E ++ +E+ ++L HPN+VR +IMEY G+L
Sbjct: 47 LVAVKYIERGAAIDE--NVQREIINHRSLR-HPNIVRFKEVILTPTHLAIIMEYASGGEL 103
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQ-VARGMQFLSSRGIIHRDLAARNVLI 142
+ R A R+ S D F +Q + G+ + S I HRDL N L+
Sbjct: 104 --YERICNAGRF------------SEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLL 149
Query: 143 GENHC--CKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVK-SDIWSFGV 199
+ K+ DFG+++ + S + KS P ++APE L + K +D+WS GV
Sbjct: 150 DGSPAPRLKICDFGYSKSSVLHS--QPKSTVGTP-AYIAPEVLLRQEYDGKIADVWSCGV 206
Query: 200 LIWEIVTLGSTPY 212
++ ++ +G+ P+
Sbjct: 207 TLY-VMLVGAYPF 218
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL----LGCCTEKEPFFV--IMEY 77
+VA+K + ++ + R EL +M+ LD H N+VRL +K+ ++ +++Y
Sbjct: 75 LVAIKKVLQDKRFKNR-----ELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDY 128
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
VP + SRA++ ++ K + YQ+ R + ++ S GI HRD+
Sbjct: 129 VPETVYRVARHYSRAKQTLPVIYVKL----------YMYQLFRSLAYIHSFGICHRDIKP 178
Query: 138 RNVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI-FSVKSDIW 195
+N+L+ + K+ DFG A+ L+ R + APE ++ ++ D+W
Sbjct: 179 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---YRAPELIFGATDYTSSIDVW 235
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
S G ++ E++ LG +PG + + +
Sbjct: 236 SAGCVLAELL-LGQPIFPGDSGVDQL 260
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL----LGCCTEKEPFFV--IMEY 77
+VA+K + ++ + R EL +M+ LD H N+VRL +K+ ++ +++Y
Sbjct: 83 LVAIKKVLQDKRFKNR-----ELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDY 136
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
VP + SRA++ ++ K + YQ+ R + ++ S GI HRD+
Sbjct: 137 VPETVYRVARHYSRAKQTLPVIYVKL----------YMYQLFRSLAYIHSFGICHRDIKP 186
Query: 138 RNVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI-FSVKSDIW 195
+N+L+ + K+ DFG A+ L+ R + APE ++ ++ D+W
Sbjct: 187 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---YRAPELIFGATDYTSSIDVW 243
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
S G ++ E++ LG +PG + + +
Sbjct: 244 SAGCVLAELL-LGQPIFPGDSGVDQL 268
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL----LGCCTEKEPFFV--IMEY 77
+VA+K + ++ + R EL +M+ LD H N+VRL +K+ ++ +++Y
Sbjct: 52 LVAIKKVLQDKRFKNR-----ELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDY 105
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
VP + SRA++ ++ K + YQ+ R + ++ S GI HRD+
Sbjct: 106 VPETVYRVARHYSRAKQTLPVIYVKL----------YMYQLFRSLAYIHSFGICHRDIKP 155
Query: 138 RNVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI-FSVKSDIW 195
+N+L+ + K+ DFG A+ L+ R + APE ++ ++ D+W
Sbjct: 156 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---YRAPELIFGATDYTSSIDVW 212
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
S G ++ E++ LG +PG + + +
Sbjct: 213 SAGCVLAELL-LGQPIFPGDSGVDQL 237
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL----LGCCTEKEPFFV--IMEY 77
+VA+K + ++ + R EL +M+ LD H N+VRL +K+ ++ +++Y
Sbjct: 81 LVAIKKVLQDKRFKNR-----ELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDY 134
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
VP + SRA++ ++ K + YQ+ R + ++ S GI HRD+
Sbjct: 135 VPETVYRVARHYSRAKQTLPVIYVKL----------YMYQLFRSLAYIHSFGICHRDIKP 184
Query: 138 RNVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI-FSVKSDIW 195
+N+L+ + K+ DFG A+ L+ R + APE ++ ++ D+W
Sbjct: 185 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---YRAPELIFGATDYTSSIDVW 241
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
S G ++ E++ LG +PG + + +
Sbjct: 242 SAGCVLAELL-LGQPIFPGDSGVDQL 266
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 84/176 (47%), Gaps = 23/176 (13%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L+E+ +++ + HPN+++L FF++ + + G+L +L +
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT-------------E 117
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+L+ ++ + + L I+HRDL N+L+ ++ K+ DFGF+ L
Sbjct: 118 KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG 177
Query: 163 SVYERKSEGRLPIRWMAPE----SLYDNI--FSVKSDIWSFGVLIWEIVTLGSTPY 212
E+ E ++APE S+ DN + + D+WS GV+++ ++ GS P+
Sbjct: 178 ---EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA-GSPPF 229
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 31/209 (14%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
+ A+K +K++ R+ L E+ V+K + H N+V L ++++M+ V G+L
Sbjct: 36 LFALKCIKKSPAFRDS-SLENEIAVLKKIK-HENIVTLEDIYESTTHYYLVMQLVSGGEL 93
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI- 142
F R Y T +D + QV +++L GI+HRDL N+L
Sbjct: 94 --FDRILERGVY-----------TEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYL 140
Query: 143 --GENHCCKVADFGFAR----DLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWS 196
EN + DFG ++ +M+++ + G ++APE L +S D WS
Sbjct: 141 TPEENSKIMITDFGLSKMEQNGIMSTAC---GTPG-----YVAPEVLAQKPYSKAVDCWS 192
Query: 197 FGVLIWEIVTLGSTPYPGMAAAEVMKKSK 225
GV+ + I+ G P+ +++ +K K
Sbjct: 193 IGVITY-ILLCGYPPFYEETESKLFEKIK 220
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL----LGCCTEKEPFFV--IMEY 77
+VA+K + ++ + R EL +M+ LD H N+VRL +K+ ++ +++Y
Sbjct: 85 LVAIKKVLQDKRFKNR-----ELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDY 138
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
VP + SRA++ ++ K + YQ+ R + ++ S GI HRD+
Sbjct: 139 VPETVYRVARHYSRAKQTLPVIYVKL----------YMYQLFRSLAYIHSFGICHRDIKP 188
Query: 138 RNVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI-FSVKSDIW 195
+N+L+ + K+ DFG A+ L+ R + APE ++ ++ D+W
Sbjct: 189 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---YRAPELIFGATDYTSSIDVW 245
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
S G ++ E++ LG +PG + + +
Sbjct: 246 SAGCVLAELL-LGQPIFPGDSGVDQL 270
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 84/176 (47%), Gaps = 23/176 (13%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L+E+ +++ + HPN+++L FF++ + + G+L +L +
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT-------------E 104
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+L+ ++ + + L I+HRDL N+L+ ++ K+ DFGF+ L
Sbjct: 105 KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG 164
Query: 163 SVYERKSEGRLPIRWMAPE----SLYDNI--FSVKSDIWSFGVLIWEIVTLGSTPY 212
E+ E ++APE S+ DN + + D+WS GV+++ ++ GS P+
Sbjct: 165 ---EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA-GSPPF 216
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 98/229 (42%), Gaps = 51/229 (22%)
Query: 24 IVAVKTLK---ENAGERERLDLLQELTVMKTLDPHPNVVRLLGC--CTEKEPFFVIMEYV 78
+VAVK + +N+ + +R +E+ ++ L H N+V LL +++ +Y+
Sbjct: 36 VVAVKKIFDAFQNSTDAQRT--FREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93
Query: 79 PYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAAR 138
L + +R+ N L YQ+ + +++L S G++HRD+
Sbjct: 94 E-TDLHAVIRA--------------NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPS 138
Query: 139 NVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPI----------------------R 176
N+L+ KVADFG +R S V R+ +P+ R
Sbjct: 139 NILLNAECHVKVADFGLSR----SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATR 194
Query: 177 WM-APESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTPYPGMAAAEVMKK 223
W APE L + K D+WS G ++ EI+ G +PG + +++
Sbjct: 195 WYRAPEILLGSTKYTKGIDMWSLGCILGEILC-GKPIFPGSSTMNQLER 242
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
++ +E+ + K L+ H NVV+ G E ++ +EY G+L +
Sbjct: 50 NIKKEIXINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------- 100
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ D F +Q+ G+ +L GI HRD+ N+L+ E K++DFG A +
Sbjct: 101 -----MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VF 154
Query: 161 TSSVYER---KSEGRLPIRWMAPESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTPY 212
+ ER K G LP ++APE L F + D+WS G+++ ++ G P+
Sbjct: 155 RYNNRERLLNKMCGTLP--YVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPW 207
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRL----LGCCTEKEPFFV--IMEY 77
+VA+K + ++ + R EL +M+ LD H N+VRL +K+ ++ +++Y
Sbjct: 126 LVAIKKVLQDKRFKNR-----ELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDY 179
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
VP + SRA++ ++ K + YQ+ R + ++ S GI HRD+
Sbjct: 180 VPETVYRVARHYSRAKQTLPVIYVKL----------YMYQLFRSLAYIHSFGICHRDIKP 229
Query: 138 RNVLIG-ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI-FSVKSDIW 195
+N+L+ + K+ DFG A+ L+ R + APE ++ ++ D+W
Sbjct: 230 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---YRAPELIFGATDYTSSIDVW 286
Query: 196 SFGVLIWEIVTLGSTPYPGMAAAEVM 221
S G ++ E++ LG +PG + + +
Sbjct: 287 SAGCVLAELL-LGQPIFPGDSGVDQL 311
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 82/175 (46%), Gaps = 30/175 (17%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEY P G++ S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N++I + +V DFG A
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
++ +GR ++APE + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPF 238
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
++ +E+ + K L+ H NVV+ G E ++ +EY G+L +
Sbjct: 51 NIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------- 101
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ D F +Q+ G+ +L GI HRD+ N+L+ E K++DFG A +
Sbjct: 102 -----MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VF 155
Query: 161 TSSVYER---KSEGRLPIRWMAPESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTPY 212
+ ER K G LP ++APE L F + D+WS G+++ ++ G P+
Sbjct: 156 RYNNRERLLNKMCGTLP--YVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPW 208
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 80/186 (43%), Gaps = 35/186 (18%)
Query: 38 ERLDLLQELTVMKTLDPHPNVVRLL----GCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQ 93
ER +E +K L HPN+VR K+ ++ E G L+++L+ +
Sbjct: 68 ERQRFKEEAEXLKGLQ-HPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVX 126
Query: 94 RYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRG--IIHRDLAARNVLI-GENHCCKV 150
+ + L S+C Q+ +G+QFL +R IIHRDL N+ I G K+
Sbjct: 127 KI-------------KVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKI 173
Query: 151 ADFGFARDLMTSSVYERKSEGRLPI---RWMAPESLYDNIFSVKSDIWSFGVLIWEIVTL 207
D G A +R S + I + APE Y+ + D+++FG E T
Sbjct: 174 GDLGLA-------TLKRASFAKAVIGTPEFXAPEX-YEEKYDESVDVYAFGXCXLEXAT- 224
Query: 208 GSTPYP 213
+ YP
Sbjct: 225 --SEYP 228
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
++ +E+ + K L+ H NVV+ G E ++ +EY G+L +
Sbjct: 51 NIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------- 101
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ D F +Q+ G+ +L GI HRD+ N+L+ E K++DFG A +
Sbjct: 102 -----MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VF 155
Query: 161 TSSVYER---KSEGRLPIRWMAPESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTPY 212
+ ER K G LP ++APE L F + D+WS G+++ ++ G P+
Sbjct: 156 RYNNRERLLNKMCGTLP--YVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
++ +E+ + K L+ H NVV+ G E ++ +EY G+L +
Sbjct: 51 NIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------- 101
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ D F +Q+ G+ +L GI HRD+ N+L+ E K++DFG A +
Sbjct: 102 -----MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VF 155
Query: 161 TSSVYER---KSEGRLPIRWMAPESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTPY 212
+ ER K G LP ++APE L F + D+WS G+++ ++ G P+
Sbjct: 156 RYNNRERLLNKMCGTLP--YVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPW 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
++ +E+ + K L+ H NVV+ G E ++ +EY G+L +
Sbjct: 51 NIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------- 101
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ D F +Q+ G+ +L GI HRD+ N+L+ E K++DFG A +
Sbjct: 102 -----MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VF 155
Query: 161 TSSVYER---KSEGRLPIRWMAPESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTPY 212
+ ER K G LP ++APE L F + D+WS G+++ ++ G P+
Sbjct: 156 RYNNRERLLNKMCGTLP--YVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPW 208
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
++ +E+ + K L+ H NVV+ G E ++ +EY G+L +
Sbjct: 50 NIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------- 100
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ D F +Q+ G+ +L GI HRD+ N+L+ E K++DFG A +
Sbjct: 101 -----MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VF 154
Query: 161 TSSVYER---KSEGRLPIRWMAPESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTPY 212
+ ER K G LP ++APE L F + D+WS G+++ ++ G P+
Sbjct: 155 RYNNRERLLNKMCGTLP--YVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPW 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
++ +E+ + K L+ H NVV+ G E ++ +EY G+L +
Sbjct: 51 NIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------- 101
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ D F +Q+ G+ +L GI HRD+ N+L+ E K++DFG A +
Sbjct: 102 -----MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VF 155
Query: 161 TSSVYER---KSEGRLPIRWMAPESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTPY 212
+ ER K G LP ++APE L F + D+WS G+++ ++ G P+
Sbjct: 156 RYNNRERLLNKMCGTLP--YVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPW 208
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 40/155 (25%)
Query: 71 FFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGM-----QFL 125
++I +Y G L +L KS +L ++ + Y G+ +
Sbjct: 110 LYLITDYHENGSLYDYL--------------KSTTLDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 126 SSRG---IIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLP-------I 175
S++G I HRDL ++N+L+ +N C +AD G A ++ + +E +P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDT-----NEVDIPPNTRVGTK 210
Query: 176 RWMAP----ESLYDNIFS--VKSDIWSFGVLIWEI 204
R+M P ESL N F + +D++SFG+++WE+
Sbjct: 211 RYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
++ +E+ + K L+ H NVV+ G E ++ +EY G+L +
Sbjct: 50 NIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------- 100
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ D F +Q+ G+ +L GI HRD+ N+L+ E K++DFG A +
Sbjct: 101 -----MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VF 154
Query: 161 TSSVYER---KSEGRLPIRWMAPESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTPY 212
+ ER K G LP ++APE L F + D+WS G+++ ++ G P+
Sbjct: 155 RYNNRERLLNKMCGTLP--YVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPW 207
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
++ +E+ + K L+ H NVV+ G E ++ +EY G+L +
Sbjct: 50 NIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------- 100
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ D F +Q+ G+ +L GI HRD+ N+L+ E K++DFG A +
Sbjct: 101 -----MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VF 154
Query: 161 TSSVYER---KSEGRLPIRWMAPESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTPY 212
+ ER K G LP ++APE L F + D+WS G+++ ++ G P+
Sbjct: 155 RYNNRERLLNKMCGTLP--YVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPW 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
++ +E+ + K L+ H NVV+ G E ++ +EY G+L +
Sbjct: 49 NIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------- 99
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ D F +Q+ G+ +L GI HRD+ N+L+ E K++DFG A +
Sbjct: 100 -----MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VF 153
Query: 161 TSSVYER---KSEGRLPIRWMAPESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTPY 212
+ ER K G LP ++APE L F + D+WS G+++ ++ G P+
Sbjct: 154 RYNNRERLLNKMCGTLP--YVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPW 206
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
++ +E+ + K L+ H NVV+ G E ++ +EY G+L +
Sbjct: 50 NIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------- 100
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ D F +Q+ G+ +L GI HRD+ N+L+ E K++DFG A +
Sbjct: 101 -----MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VF 154
Query: 161 TSSVYER---KSEGRLPIRWMAPESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTPY 212
+ ER K G LP ++APE L F + D+WS G+++ ++ G P+
Sbjct: 155 RYNNRERLLNKMCGTLP--YVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPW 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
++ +E+ + K L+ H NVV+ G E ++ +EY G+L +
Sbjct: 50 NIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------- 100
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ D F +Q+ G+ +L GI HRD+ N+L+ E K++DFG A +
Sbjct: 101 -----MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VF 154
Query: 161 TSSVYER---KSEGRLPIRWMAPESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTPY 212
+ ER K G LP ++APE L F + D+WS G+++ ++ G P+
Sbjct: 155 RYNNRERLLNKMCGTLP--YVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPW 207
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 22/189 (11%)
Query: 27 VKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF 86
+ T K +A + ++L+ +E + + L HPN+VRL +E+ +++ + V G+L
Sbjct: 64 INTKKLSARDHQKLE--REARICRLLK-HPNIVRLHDSISEEGFHYLVFDLVTGGEL--- 117
Query: 87 LRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG--- 143
A+ YY+ D + +Q+ + + I+HRDL N+L+
Sbjct: 118 FEDIVAREYYSEA----------DASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKC 167
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWE 203
+ K+ADFG A ++ G +++PE L + + DIW+ GV+++
Sbjct: 168 KGAAVKLADFGLAIEVQGEQQAWFGFAG--TPGYLSPEVLRKDPYGKPVDIWACGVILY- 224
Query: 204 IVTLGSTPY 212
I+ +G P+
Sbjct: 225 ILLVGYPPF 233
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 85/176 (48%), Gaps = 23/176 (13%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L+E+ +++ + HPN+++L FF++ + + G+L +L +
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT-------------E 117
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+L+ ++ + + L I+HRDL N+L+ ++ K+ DFGF+ L
Sbjct: 118 KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG 177
Query: 163 SVYERKSEGRLPIRWMAPE----SLYDNI--FSVKSDIWSFGVLIWEIVTLGSTPY 212
+ +S P ++APE S+ DN + + D+WS GV+++ ++ GS P+
Sbjct: 178 E--KLRSVCGTP-SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA-GSPPF 229
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 30/186 (16%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E +++ ++ P +V+L + +++MEYV G++ S LR R R+ + H +
Sbjct: 89 LNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRF-SEPHAR 144
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTS 162
+ Q+ ++L S +I+RDL N+LI + +V DFGFA
Sbjct: 145 F----------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------ 188
Query: 163 SVYERKSEGRL-----PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAA 217
++ +GR ++AP + ++ D W+ GVLI+E+ G P+
Sbjct: 189 ----KRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQP 243
Query: 218 AEVMKK 223
++ +K
Sbjct: 244 IQIYEK 249
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
++ +E+ + K L+ H NVV+ G E ++ +EY G+L +
Sbjct: 50 NIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------- 100
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ D F +Q+ G+ +L GI HRD+ N+L+ E K++DFG A +
Sbjct: 101 -----MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VF 154
Query: 161 TSSVYER---KSEGRLPIRWMAPESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTPY 212
+ ER K G LP ++APE L F + D+WS G+++ ++ G P+
Sbjct: 155 RYNNRERLLNKMCGTLP--YVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPW 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
++ +E+ + K L+ H NVV+ G E ++ +EY G+L +
Sbjct: 50 NIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------- 100
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ D F +Q+ G+ +L GI HRD+ N+L+ E K++DFG A +
Sbjct: 101 -----MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VF 154
Query: 161 TSSVYER---KSEGRLPIRWMAPESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTPY 212
+ ER K G LP ++APE L F + D+WS G+++ ++ G P+
Sbjct: 155 RYNNRERLLNKMCGTLP--YVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPW 207
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
++ +E+ + K L+ H NVV+ G E ++ +EY G+L +
Sbjct: 51 NIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------- 101
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
+ D F +Q+ G+ +L GI HRD+ N+L+ E K++DFG A +
Sbjct: 102 -----MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VF 155
Query: 161 TSSVYER---KSEGRLPIRWMAPESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTPY 212
+ ER K G LP ++APE L F + D+WS G+++ ++ G P+
Sbjct: 156 RYNNRERLLNKMCGTLP--YVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPW 208
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 25/172 (14%)
Query: 39 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 98
R +++EL V+ + P +V G + ME++ G L L+
Sbjct: 67 RNQIIRELQVLHECNS-PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---------- 115
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSR-GIIHRDLAARNVLIGENHCCKVADFGFAR 157
K+ + + L V +G+ +L + I+HRD+ N+L+ K+ DFG +
Sbjct: 116 ---KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG 172
Query: 158 DL---MTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVT 206
L M +S +S +M+PE L +SV+SDIWS G+ + E+
Sbjct: 173 QLIDSMANSFVGTRS-------YMSPERLQGTHYSVQSDIWSMGLSLVEMAV 217
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 96/201 (47%), Gaps = 32/201 (15%)
Query: 26 AVKTLKENAGER---ERLDLLQELT-----VMKTLDPHPNVVRLLGCCTEKEPFFVIMEY 77
AVK + E ER E+L+ ++E T +++ + HP+++ L+ F++ +
Sbjct: 123 AVKIM-EVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDL 181
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
+ G+L +L A L+ ++ S + + FL + I+HRDL
Sbjct: 182 MRKGELFDYLTEKVA-------------LSEKETRSIMRSLLEAVSFLHANNIVHRDLKP 228
Query: 138 RNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI------FSVK 191
N+L+ +N +++DFGF+ L E+ E ++APE L ++ + +
Sbjct: 229 ENILLDDNMQIRLSDFGFSCHLEPG---EKLRELCGTPGYLAPEILKCSMDETHPGYGKE 285
Query: 192 SDIWSFGVLIWEIVTLGSTPY 212
D+W+ GV+++ ++ GS P+
Sbjct: 286 VDLWACGVILFTLLA-GSPPF 305
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 46/197 (23%)
Query: 42 LLQELTVMKTLDPHPNVVRLLGCCTEKE-----PFFVIMEYVPYGKLQSFLRSSRAQRYY 96
+L+E+ ++ L+ H +VV++L K+ +V++E F + R Y
Sbjct: 99 ILREIAILNRLN-HDHVVKVLDIVIPKDVEKFDELYVVLEIAD----SDFKKLFRTPVYL 153
Query: 97 NNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFA 156
+H K+ Y + G++++ S GI+HRDL N L+ ++ KV DFG A
Sbjct: 154 TELHIKT----------LLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLA 203
Query: 157 R---------------------DLMT---SSVYERKSEGRLPIRWM-APE-SLYDNIFSV 190
R +L+T + +R+ G + RW APE L ++
Sbjct: 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTE 263
Query: 191 KSDIWSFGVLIWEIVTL 207
D+WS G + E++ +
Sbjct: 264 AIDVWSIGCIFAELLNM 280
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 75/161 (46%), Gaps = 20/161 (12%)
Query: 56 PNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 115
P VV+L + + +++MEY+P G L + + + + +
Sbjct: 135 PWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKF--------------YT 180
Query: 116 YQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPI 175
+V + + S G+IHRD+ N+L+ ++ K+ADFG + + + + P
Sbjct: 181 AEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTP- 239
Query: 176 RWMAPESLY----DNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
+++PE L D + + D WS GV ++E++ +G TP+
Sbjct: 240 DYISPEVLKSQGGDGYYGRECDWWSVGVFLFEML-VGDTPF 279
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 18/199 (9%)
Query: 17 RGREGPCIVAVK-TLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIM 75
R +E + AVK ++ G ++R L E+ + + HP VRL E +
Sbjct: 77 RSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILY--- 133
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
LQ+ L Q++ SL + + + L S+G++H D+
Sbjct: 134 -------LQTELCGPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDV 183
Query: 136 AARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
N+ +G CK+ DFG +L T+ E + EG R+MAPE L + +D++
Sbjct: 184 KPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ-EGD--PRYMAPE-LLQGSYGTAADVF 239
Query: 196 SFGVLIWEIVTLGSTPYPG 214
S G+ I E+ P+ G
Sbjct: 240 SLGLTILEVACNMELPHGG 258
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 25/200 (12%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
R ++ +VAVK ++ GE+ ++ +E+ ++L HPN+VR ++ME
Sbjct: 39 RDKQSNELVAVKYIER--GEKIDENVKREIINHRSLR-HPNIVRFKEVILTPTHLAIVME 95
Query: 77 YVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCY-QVARGMQFLSSRGIIHRDL 135
Y G+L F R A R+ S D F + Q+ G+ + + + HRDL
Sbjct: 96 YASGGEL--FERICNAGRF------------SEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 136 AARNVLIGENHC--CKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVK-S 192
N L+ + K+ FG+++ + S + KS P ++APE L + K +
Sbjct: 142 KLENTLLDGSPAPRLKICAFGYSKSSVLHS--QPKSTVGTP-AYIAPEVLLKKEYDGKVA 198
Query: 193 DIWSFGVLIWEIVTLGSTPY 212
D+WS GV ++ ++ +G+ P+
Sbjct: 199 DVWSCGVTLY-VMLVGAYPF 217
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 83/184 (45%), Gaps = 25/184 (13%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
+E++++ + H N++ L E +I E++ L F R ++ +
Sbjct: 50 KEISIL-NIARHRNILHLHESFESMEELVMIFEFI--SGLDIFER----------INTSA 96
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG--ENHCCKVADFGFARDLMT 161
L R++ S+ +QV +QFL S I H D+ N++ + K+ +FG AR L
Sbjct: 97 FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156
Query: 162 SSVYERKSEGRLPI---RWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAA 218
+ RL + APE ++ S +D+WS G L++ +++ G P+
Sbjct: 157 GDNF------RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS-GINPFLAETNQ 209
Query: 219 EVMK 222
++++
Sbjct: 210 QIIE 213
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 32/220 (14%)
Query: 13 MSPERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFF 72
+S + G+E AVK +++ AG R + +E+ + + N++ L+ + F+
Sbjct: 33 VSLQNGKE----YAVKIIEKQAG-HSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFY 87
Query: 73 VIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIH 132
++ E + G S L + Q+++N R+ + VA + FL ++GI H
Sbjct: 88 LVFEKLQGG---SILAHIQKQKHFNE----------REASRVVRDVAAALDFLHTKGIAH 134
Query: 133 RDLAARNVLIGENH---CCKVADF--GFARDLMTSSVYERKSEGRLP---IRWMAPESL- 183
RDL N+L K+ DF G L S E P +MAPE +
Sbjct: 135 RDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVE 194
Query: 184 ----YDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAE 219
+ + D+WS GV+++ I+ G P+ G A+
Sbjct: 195 VFTDQATFYDKRCDLWSLGVVLY-IMLSGYPPFVGHCGAD 233
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 55 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 114
HP + L + +MEY G+L F SR + + T +
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVF-----------TEERARFY 110
Query: 115 CYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLP 174
++ +++L SR +++RD+ N+++ ++ K+ DFG ++ ++ + G
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG--T 168
Query: 175 IRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
++APE L DN + D W GV+++E++ G P+
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 205
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 56 PNVVRLLGCCTE----KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDL 111
P++VR++ ++ ++ME + G+L S ++ Q + T R+
Sbjct: 69 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-----------AFTEREA 117
Query: 112 TSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE---NHCCKVADFGFARDLMTSSVYERK 168
+ + +Q+L S I HRD+ N+L N K+ DFGFA++ ++ +
Sbjct: 118 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE---TTSHNSL 174
Query: 169 SEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY---PGMAAAEVMK 222
+E ++APE L + D+WS GV+++ I+ G P+ G+A + MK
Sbjct: 175 TEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY-ILLCGYPPFYSNHGLAISPGMK 230
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 77/188 (40%), Gaps = 25/188 (13%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E+ ++ D HPNV+R C + F I + LQ + S + +
Sbjct: 74 LMEIKLLTESDDHPNVIRYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKE 132
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI-------------GENHCCK 149
N + S Q+A G+ L S IIHRDL +N+L+ EN
Sbjct: 133 YNPI------SLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 186
Query: 150 VADFGFARDLMTSSVYERKSEGRLP--IRWMAPESLYDNI---FSVKSDIWSFGVLIWEI 204
++DFG + L + R + W APE L ++ + DI+S G + + I
Sbjct: 187 ISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYI 246
Query: 205 VTLGSTPY 212
++ G P+
Sbjct: 247 LSKGKHPF 254
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 77/188 (40%), Gaps = 25/188 (13%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E+ ++ D HPNV+R C + F I + LQ + S + +
Sbjct: 74 LMEIKLLTESDDHPNVIRYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKE 132
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI-------------GENHCCK 149
N + S Q+A G+ L S IIHRDL +N+L+ EN
Sbjct: 133 YNPI------SLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 186
Query: 150 VADFGFARDLMTSSVYERKSEGRLP--IRWMAPESLYDNI---FSVKSDIWSFGVLIWEI 204
++DFG + L + R + W APE L ++ + DI+S G + + I
Sbjct: 187 ISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYI 246
Query: 205 VTLGSTPY 212
++ G P+
Sbjct: 247 LSKGKHPF 254
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 55 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 114
HP + L + +MEY G+L F SR + + T +
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVF-----------TEERARFY 115
Query: 115 CYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLP 174
++ +++L SR +++RD+ N+++ ++ K+ DFG ++ ++ + G
Sbjct: 116 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG--T 173
Query: 175 IRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
++APE L DN + D W GV+++E++ G P+
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 210
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 55 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 114
HP + L + +MEY G+L F SR + + T +
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVF-----------TEERARFY 110
Query: 115 CYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLP 174
++ +++L SR +++RD+ N+++ ++ K+ DFG ++ ++ + G
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG--T 168
Query: 175 IRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
++APE L DN + D W GV+++E++ G P+
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 205
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 56 PNVVRLLGCCTE----KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDL 111
P++VR++ ++ ++ME + G+L S ++ Q + T R+
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-----------AFTEREA 119
Query: 112 TSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE---NHCCKVADFGFARDLMTSSVYERK 168
+ + +Q+L S I HRD+ N+L N K+ DFGFA++ T+S
Sbjct: 120 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLT 177
Query: 169 SEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY---PGMAAAEVMK 222
+ P ++APE L + D+WS GV+++ I+ G P+ G+A + MK
Sbjct: 178 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMY-ILLCGYPPFYSNHGLAISPGMK 232
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 25/200 (12%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIME 76
R ++ +VAVK ++ GE+ ++ +E+ ++L HPN+VR ++ME
Sbjct: 39 RDKQSNELVAVKYIER--GEKIDENVKREIINHRSLR-HPNIVRFKEVILTPTHLAIVME 95
Query: 77 YVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCY-QVARGMQFLSSRGIIHRDL 135
Y G+L F R A R+ S D F + Q+ G+ + + + HRDL
Sbjct: 96 YASGGEL--FERICNAGRF------------SEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 136 AARNVLIGENHC--CKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVK-S 192
N L+ + K+ FG+++ +S ++ + + ++APE L + K +
Sbjct: 142 KLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVA 198
Query: 193 DIWSFGVLIWEIVTLGSTPY 212
D+WS GV ++ ++ +G+ P+
Sbjct: 199 DVWSCGVTLY-VMLVGAYPF 217
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 55 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 114
HP + L + +MEY G+L F SR + + T +
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVF-----------TEERARFY 110
Query: 115 CYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLP 174
++ +++L SR +++RD+ N+++ ++ K+ DFG ++ ++ + G
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG--T 168
Query: 175 IRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
++APE L DN + D W GV+++E++ G P+
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 205
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 55 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 114
HP + L + +MEY G+L F SR + + T +
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVF-----------TEERARFY 110
Query: 115 CYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLP 174
++ +++L SR +++RD+ N+++ ++ K+ DFG ++ ++ + G
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG--T 168
Query: 175 IRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
++APE L DN + D W GV+++E++ G P+
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 55 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 114
HP + L + +MEY G+L F SR + + T +
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVF-----------TEERARFY 110
Query: 115 CYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLP 174
++ +++L SR +++RD+ N+++ ++ K+ DFG ++ ++ + G
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG--T 168
Query: 175 IRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
++APE L DN + D W GV+++E++ G P+
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 205
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 55 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 114
HP + L + +MEY G+L F SR + + T +
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVF-----------TEERARFY 113
Query: 115 CYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLP 174
++ +++L SR +++RD+ N+++ ++ K+ DFG ++ ++ + G
Sbjct: 114 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG--T 171
Query: 175 IRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
++APE L DN + D W GV+++E++ G P+
Sbjct: 172 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 208
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 56 PNVVRLLGCCTE----KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDL 111
P++VR++ ++ ++ME + G+L S ++ Q + T R+
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-----------AFTEREA 163
Query: 112 TSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE---NHCCKVADFGFARDLMTSSVYERK 168
+ + +Q+L S I HRD+ N+L N K+ DFGFA++ T+S
Sbjct: 164 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLT 221
Query: 169 SEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY---PGMAAAEVMK 222
+ P ++APE L + D+WS GV+++ I+ G P+ G+A + MK
Sbjct: 222 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMY-ILLCGYPPFYSNHGLAISPGMK 276
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 31/197 (15%)
Query: 24 IVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
+ AVK + + A + + + E+ V++ + H N+V L +++M+ V G+L
Sbjct: 49 LFAVKCIPKKALKGKESSIENEIAVLRKI-KHENIVALEDIYESPNHLYLVMQLVSGGEL 107
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI- 142
F R Y T +D ++ QV + +L GI+HRDL N+L
Sbjct: 108 --FDRIVEKGFY-----------TEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYY 154
Query: 143 --GENHCCKVADFGFAR-----DLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIW 195
E ++DFG ++ D+M+++ + G ++APE L +S D W
Sbjct: 155 SQDEESKIMISDFGLSKMEGKGDVMSTAC---GTPG-----YVAPEVLAQKPYSKAVDCW 206
Query: 196 SFGVLIWEIVTLGSTPY 212
S GV+ + I+ G P+
Sbjct: 207 SIGVIAY-ILLCGYPPF 222
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 56 PNVVRLLGCCTE----KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDL 111
P++VR++ ++ ++ME + G+L S ++ Q + T R+
Sbjct: 121 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-----------AFTEREA 169
Query: 112 TSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE---NHCCKVADFGFARDLMTSSVYERK 168
+ + +Q+L S I HRD+ N+L N K+ DFGFA++ T+S
Sbjct: 170 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLT 227
Query: 169 SEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY---PGMAAAEVMK 222
+ P ++APE L + D+WS GV+++ I+ G P+ G+A + MK
Sbjct: 228 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMY-ILLCGYPPFYSNHGLAISPGMK 282
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 22/189 (11%)
Query: 27 VKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF 86
+ T K +A + ++L+ +E + + L HPN+VRL +E+ ++I + V G+L
Sbjct: 55 INTKKLSARDHQKLE--REARICRLLK-HPNIVRLHDSISEEGHHYLIFDLVTGGEL--- 108
Query: 87 LRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG--- 143
A+ YY+ D + Q+ + G++HRDL N+L+
Sbjct: 109 FEDIVAREYYSEA----------DASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKL 158
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWE 203
+ K+ADFG A ++ G +++PE L + + D+W+ GV+++
Sbjct: 159 KGAAVKLADFGLAIEVEGEQQAWFGFAG--TPGYLSPEVLRKDPYGKPVDLWACGVILY- 215
Query: 204 IVTLGSTPY 212
I+ +G P+
Sbjct: 216 ILLVGYPPF 224
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 56 PNVVRLLGCCTE----KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDL 111
P++VR++ ++ ++ME + G+L S ++ Q + T R+
Sbjct: 69 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-----------AFTEREA 117
Query: 112 TSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE---NHCCKVADFGFARDLMTSSVYERK 168
+ + +Q+L S I HRD+ N+L N K+ DFGFA++ T+S
Sbjct: 118 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLT 175
Query: 169 SEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY---PGMAAAEVMK 222
+ P ++APE L + D+WS GV+++ I+ G P+ G+A + MK
Sbjct: 176 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMY-ILLCGYPPFYSNHGLAISPGMK 230
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 22/189 (11%)
Query: 27 VKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF 86
+ T K +A + ++L+ +E + + L HPN+VRL +E+ +++ + V G+L
Sbjct: 37 INTKKLSARDHQKLE--REARICRLLK-HPNIVRLHDSISEEGFHYLVFDLVTGGEL--- 90
Query: 87 LRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG--- 143
A+ YY+ D + Q+ + GI+HRDL N+L+
Sbjct: 91 FEDIVAREYYSEA----------DASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKS 140
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWE 203
+ K+ADFG A ++ G +++PE L + + D+W+ GV+++
Sbjct: 141 KGAAVKLADFGLAIEVQGDQQAWFGFAGT--PGYLSPEVLRKDPYGKPVDMWACGVILY- 197
Query: 204 IVTLGSTPY 212
I+ +G P+
Sbjct: 198 ILLVGYPPF 206
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 56 PNVVRLLGCCTE----KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDL 111
P++VR++ ++ ++ME + G+L S ++ Q + T R+
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-----------AFTEREA 119
Query: 112 TSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE---NHCCKVADFGFARDLMTSSVYERK 168
+ + +Q+L S I HRD+ N+L N K+ DFGFA++ T+S
Sbjct: 120 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLT 177
Query: 169 SEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY---PGMAAAEVMK 222
+ P ++APE L + D+WS GV+++ I+ G P+ G+A + MK
Sbjct: 178 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMY-ILLCGYPPFYSNHGLAISPGMK 232
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 56 PNVVRLLGCCTE----KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDL 111
P++VR++ ++ ++ME + G+L S ++ Q + T R+
Sbjct: 70 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-----------AFTEREA 118
Query: 112 TSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE---NHCCKVADFGFARDLMTSSVYERK 168
+ + +Q+L S I HRD+ N+L N K+ DFGFA++ T+S
Sbjct: 119 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLT 176
Query: 169 SEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY---PGMAAAEVMK 222
+ P ++APE L + D+WS GV+++ I+ G P+ G+A + MK
Sbjct: 177 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMY-ILLCGYPPFYSNHGLAISPGMK 231
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 21/162 (12%)
Query: 55 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 114
H NVV+ G E ++ +EY G+L + + D F
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------------MPEPDAQRF 110
Query: 115 CYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYER---KSEG 171
+Q+ G+ +L GI HRD+ N+L+ E K++DFG A + + ER K G
Sbjct: 111 FHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCG 169
Query: 172 RLPIRWMAPESLYDNIFSVKS-DIWSFGVLIWEIVTLGSTPY 212
LP ++APE L F + D+WS G+++ ++ G P+
Sbjct: 170 TLP--YVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPW 208
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 26 AVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQS 85
AVK +++ G R + +E+ ++ H NV+ L+ E++ F+++ E + G + S
Sbjct: 42 AVKIIEKQPGHI-RSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILS 100
Query: 86 FLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI--- 142
+ +R++N + S+ +D VA + FL ++GI HRDL N+L
Sbjct: 101 HIHK---RRHFNELEA---SVVVQD-------VASALDFLHNKGIAHRDLKPENILCEHP 147
Query: 143 GENHCCKVADFGFARDLMTSSVYERKSEGRL-----PIRWMAPE-----SLYDNIFSVKS 192
+ K+ DFG + + S L +MAPE S +I+ +
Sbjct: 148 NQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRC 207
Query: 193 DIWSFGVLIWEIVTLGSTPYPGMAAAE 219
D+WS GV+++ I+ G P+ G ++
Sbjct: 208 DLWSLGVILY-ILLSGYPPFVGRCGSD 233
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 22/189 (11%)
Query: 27 VKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF 86
+ T K +A + ++L+ +E + + L HPN+VRL +E+ +++ + V G+L
Sbjct: 37 INTKKLSARDHQKLE--REARICRLLK-HPNIVRLHDSISEEGFHYLVFDLVTGGEL--- 90
Query: 87 LRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG--- 143
A+ YY + D + Q+ + GI+HRDL N+L+
Sbjct: 91 FEDIVAREYY----------SEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKS 140
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWE 203
+ K+ADFG A ++ G +++PE L + + D+W+ GV+++
Sbjct: 141 KGAAVKLADFGLAIEVQGDQQAWFGFAGT--PGYLSPEVLRKDPYGKPVDMWACGVILY- 197
Query: 204 IVTLGSTPY 212
I+ +G P+
Sbjct: 198 ILLVGYPPF 206
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 56 PNVVRLLGCCTE----KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDL 111
P++VR++ ++ ++ME + G+L S ++ Q + T R+
Sbjct: 85 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-----------AFTEREA 133
Query: 112 TSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE---NHCCKVADFGFARDLMTSSVYERK 168
+ + +Q+L S I HRD+ N+L N K+ DFGFA++ T+S
Sbjct: 134 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLT 191
Query: 169 SEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY---PGMAAAEVMK 222
+ P ++APE L + D+WS GV+++ I+ G P+ G+A + MK
Sbjct: 192 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMY-ILLCGYPPFYSNHGLAISPGMK 246
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 56 PNVVRLLGCCTE----KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDL 111
P++VR++ ++ ++ME + G+L S ++ Q + T R+
Sbjct: 76 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-----------AFTEREA 124
Query: 112 TSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE---NHCCKVADFGFARDLMTSSVYERK 168
+ + +Q+L S I HRD+ N+L N K+ DFGFA++ T+S
Sbjct: 125 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLT 182
Query: 169 SEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY---PGMAAAEVMK 222
+ P ++APE L + D+WS GV+++ I+ G P+ G+A + MK
Sbjct: 183 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMY-ILLCGYPPFYSNHGLAISPGMK 237
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 56 PNVVRLLGCCTE----KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDL 111
P++VR++ ++ ++ME + G+L S ++ Q + T R+
Sbjct: 75 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-----------AFTEREA 123
Query: 112 TSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE---NHCCKVADFGFARDLMTSSVYERK 168
+ + +Q+L S I HRD+ N+L N K+ DFGFA++ T+S
Sbjct: 124 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLT 181
Query: 169 SEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY---PGMAAAEVMK 222
+ P ++APE L + D+WS GV+++ I+ G P+ G+A + MK
Sbjct: 182 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMY-ILLCGYPPFYSNHGLAISPGMK 236
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 89/179 (49%), Gaps = 25/179 (13%)
Query: 40 LDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNM 99
L++ E+ ++K L+ HP ++++ + E +++++E + G+L ++ +
Sbjct: 59 LNVETEIEILKKLN-HPCIIKIKNF-FDAEDYYIVLELMEGGEL------------FDKV 104
Query: 100 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG---ENHCCKVADFGFA 156
G + L + YQ+ +Q+L GIIHRDL NVL+ E+ K+ DFG +
Sbjct: 105 VG-NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 163
Query: 157 RDLMTSSVYERKSEGRLPIRWMAPESLYD---NIFSVKSDIWSFGVLIWEIVTLGSTPY 212
+ L +S+ ++ P ++APE L ++ D WS GV+++ I G P+
Sbjct: 164 KILGETSLM--RTLCGTPT-YLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPF 218
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 89/179 (49%), Gaps = 25/179 (13%)
Query: 40 LDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNM 99
L++ E+ ++K L+ HP ++++ + E +++++E + G+L ++ +
Sbjct: 60 LNVETEIEILKKLN-HPCIIKIKNF-FDAEDYYIVLELMEGGEL------------FDKV 105
Query: 100 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG---ENHCCKVADFGFA 156
G + L + YQ+ +Q+L GIIHRDL NVL+ E+ K+ DFG +
Sbjct: 106 VG-NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164
Query: 157 RDLMTSSVYERKSEGRLPIRWMAPESLYD---NIFSVKSDIWSFGVLIWEIVTLGSTPY 212
+ L +S+ ++ P ++APE L ++ D WS GV+++ I G P+
Sbjct: 165 KILGETSLM--RTLCGTPT-YLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPF 219
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 56 PNVVRLLGCCTE----KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDL 111
P++VR++ ++ ++ME + G+L S ++ Q + T R+
Sbjct: 77 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-----------AFTEREA 125
Query: 112 TSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE---NHCCKVADFGFARDLMTSSVYERK 168
+ + +Q+L S I HRD+ N+L N K+ DFGFA++ T+S
Sbjct: 126 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLT 183
Query: 169 SEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY---PGMAAAEVMK 222
+ P ++APE L + D+WS GV+++ I+ G P+ G+A + MK
Sbjct: 184 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMY-ILLCGYPPFYSNHGLAISPGMK 238
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Query: 129 GIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLP----IRWMAPESLY 184
I HRDL ++N+L+ +N C +AD G A +M S + G P R+MAPE L
Sbjct: 162 AIAHRDLKSKNILVKKNGQCCIADLGLA--VMHSQSTNQLDVGNNPRVGTKRYMAPEVLD 219
Query: 185 DNI----FSV--KSDIWSFGVLIWEI 204
+ I F + DIW+FG+++WE+
Sbjct: 220 ETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 15/194 (7%)
Query: 19 REGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYV 78
+ G + K L EN E + L+E+ +++ L H NVV L+ C K
Sbjct: 41 KTGQKVALKKVLMENEKEGFPITALREIKILQLLK-HENVVNLIEICRTKAS-------- 91
Query: 79 PYGKLQSFLRSSRAQRYYNNMHGKSNSL---TSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
PY + ++ + ++ SN L T ++ + G+ ++ I+HRD+
Sbjct: 92 PYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDM 151
Query: 136 AARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAPESLY--DNIFSVKS 192
A NVLI + K+ADFG AR + + + R+ W P L + +
Sbjct: 152 KAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPI 211
Query: 193 DIWSFGVLIWEIVT 206
D+W G ++ E+ T
Sbjct: 212 DLWGAGCIMAEMWT 225
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 89/179 (49%), Gaps = 25/179 (13%)
Query: 40 LDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNM 99
L++ E+ ++K L+ HP ++++ + E +++++E + G+L ++ +
Sbjct: 60 LNVETEIEILKKLN-HPCIIKIKNF-FDAEDYYIVLELMEGGEL------------FDKV 105
Query: 100 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG---ENHCCKVADFGFA 156
G + L + YQ+ +Q+L GIIHRDL NVL+ E+ K+ DFG +
Sbjct: 106 VG-NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164
Query: 157 RDLMTSSVYERKSEGRLPIRWMAPESLYD---NIFSVKSDIWSFGVLIWEIVTLGSTPY 212
+ L +S+ ++ P ++APE L ++ D WS GV+++ I G P+
Sbjct: 165 KILGETSLM--RTLCGTPT-YLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPF 219
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 89/179 (49%), Gaps = 25/179 (13%)
Query: 40 LDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNM 99
L++ E+ ++K L+ HP ++++ + E +++++E + G+L ++ +
Sbjct: 60 LNVETEIEILKKLN-HPCIIKIKNF-FDAEDYYIVLELMEGGEL------------FDKV 105
Query: 100 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG---ENHCCKVADFGFA 156
G + L + YQ+ +Q+L GIIHRDL NVL+ E+ K+ DFG +
Sbjct: 106 VG-NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164
Query: 157 RDLMTSSVYERKSEGRLPIRWMAPESLYD---NIFSVKSDIWSFGVLIWEIVTLGSTPY 212
+ L +S+ ++ P ++APE L ++ D WS GV+++ I G P+
Sbjct: 165 KILGETSLM--RTLCGTPT-YLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPF 219
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Query: 129 GIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLP----IRWMAPESLY 184
I HRDL ++N+L+ +N C +AD G A +M S + G P R+MAPE L
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLA--VMHSQSTNQLDVGNNPRVGTKRYMAPEVLD 190
Query: 185 DNI----FSV--KSDIWSFGVLIWEI 204
+ I F + DIW+FG+++WE+
Sbjct: 191 ETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 89/179 (49%), Gaps = 25/179 (13%)
Query: 40 LDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNM 99
L++ E+ ++K L+ HP ++++ + E +++++E + G+L ++ +
Sbjct: 66 LNVETEIEILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGEL------------FDKV 111
Query: 100 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG---ENHCCKVADFGFA 156
G + L + YQ+ +Q+L GIIHRDL NVL+ E+ K+ DFG +
Sbjct: 112 VG-NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 170
Query: 157 RDLMTSSVYERKSEGRLPIRWMAPESLYD---NIFSVKSDIWSFGVLIWEIVTLGSTPY 212
+ L +S+ ++ P ++APE L ++ D WS GV+++ I G P+
Sbjct: 171 KILGETSLM--RTLCGTPT-YLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPF 225
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 22/159 (13%)
Query: 71 FFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGI 130
+IME + G+L S ++ Q + T R+ + +QFL S I
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQ-----------AFTEREAAEIMRDIGTAIQFLHSHNI 130
Query: 131 IHRDLAARNVLIG---ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI 187
HRD+ N+L ++ K+ DFGFA++ +++ ++ P ++APE L
Sbjct: 131 AHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL---QTPCYTPY-YVAPEVLGPEK 186
Query: 188 FSVKSDIWSFGVLIWEIVTLGSTPY---PGMAAAEVMKK 223
+ D+WS GV+++ I+ G P+ G A + MK+
Sbjct: 187 YDKSCDMWSLGVIMY-ILLCGFPPFYSNTGQAISPGMKR 224
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Query: 129 GIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLP----IRWMAPESLY 184
I HRDL ++N+L+ +N C +AD G A +M S + G P R+MAPE L
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLA--VMHSQSTNQLDVGNNPRVGTKRYMAPEVLD 190
Query: 185 DNI----FSV--KSDIWSFGVLIWEI 204
+ I F + DIW+FG+++WE+
Sbjct: 191 ETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 25/199 (12%)
Query: 19 REGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCC-TEKEPF------ 71
+ G + K L EN E + L+E+ +++ L H NVV L+ C T+ P+
Sbjct: 40 KTGQKVALKKVLMENEKEGFPITALREIKILQLLK-HENVVNLIEICRTKASPYNRCKGS 98
Query: 72 -FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGI 130
+++ ++ + L L + + T ++ + G+ ++ I
Sbjct: 99 IYLVFDFCEHD-LAGLLSNVLVK------------FTLSEIKRVMQMLLNGLYYIHRNKI 145
Query: 131 IHRDLAARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAPESLY--DNI 187
+HRD+ A NVLI + K+ADFG AR + + + R+ W P L +
Sbjct: 146 LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERD 205
Query: 188 FSVKSDIWSFGVLIWEIVT 206
+ D+W G ++ E+ T
Sbjct: 206 YGPPIDLWGAGCIMAEMWT 224
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 22/159 (13%)
Query: 71 FFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGI 130
+IME + G+L S ++ Q + T R+ + +QFL S I
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQ-----------AFTEREAAEIMRDIGTAIQFLHSHNI 149
Query: 131 IHRDLAARNVLIG---ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNI 187
HRD+ N+L ++ K+ DFGFA++ +++ ++ P ++APE L
Sbjct: 150 AHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL---QTPCYTPY-YVAPEVLGPEK 205
Query: 188 FSVKSDIWSFGVLIWEIVTLGSTPY---PGMAAAEVMKK 223
+ D+WS GV+++ I+ G P+ G A + MK+
Sbjct: 206 YDKSCDMWSLGVIMY-ILLCGFPPFYSNTGQAISPGMKR 243
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 25/199 (12%)
Query: 19 REGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCC-TEKEPF------ 71
+ G + K L EN E + L+E+ +++ L H NVV L+ C T+ P+
Sbjct: 41 KTGQKVALKKVLMENEKEGFPITALREIKILQLLK-HENVVNLIEICRTKASPYNRCKGS 99
Query: 72 -FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGI 130
+++ ++ + L L + + T ++ + G+ ++ I
Sbjct: 100 IYLVFDFCEHD-LAGLLSNVLVK------------FTLSEIKRVMQMLLNGLYYIHRNKI 146
Query: 131 IHRDLAARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAPESLY--DNI 187
+HRD+ A NVLI + K+ADFG AR + + + R+ W P L +
Sbjct: 147 LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERD 206
Query: 188 FSVKSDIWSFGVLIWEIVT 206
+ D+W G ++ E+ T
Sbjct: 207 YGPPIDLWGAGCIMAEMWT 225
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 25/199 (12%)
Query: 19 REGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCC-TEKEPF------ 71
+ G + K L EN E + L+E+ +++ L H NVV L+ C T+ P+
Sbjct: 41 KTGQKVALKKVLMENEKEGFPITALREIKILQLLK-HENVVNLIEICRTKASPYNRCKGS 99
Query: 72 -FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGI 130
+++ ++ + L L + + T ++ + G+ ++ I
Sbjct: 100 IYLVFDFCEHD-LAGLLSNVLVK------------FTLSEIKRVMQMLLNGLYYIHRNKI 146
Query: 131 IHRDLAARNVLIGENHCCKVADFGFARDL-MTSSVYERKSEGRLPIRWMAPESLY--DNI 187
+HRD+ A NVLI + K+ADFG AR + + + R+ W P L +
Sbjct: 147 LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERD 206
Query: 188 FSVKSDIWSFGVLIWEIVT 206
+ D+W G ++ E+ T
Sbjct: 207 YGPPIDLWGAGCIMAEMWT 225
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 78/192 (40%), Gaps = 29/192 (15%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E+ ++ D HPNV+R C + F I + LQ + S + +
Sbjct: 56 LMEIKLLTESDDHPNVIRYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKE 114
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI-------------GENHCCK 149
N + S Q+A G+ L S IIHRDL +N+L+ EN
Sbjct: 115 YNPI------SLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168
Query: 150 VADFGFARDLMT--SSVYERKSEGRLPIRWMAPESLYD-NIFSVKS------DIWSFGVL 200
++DFG + L + SS + W APE L + N K DI+S G +
Sbjct: 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228
Query: 201 IWEIVTLGSTPY 212
+ I++ G P+
Sbjct: 229 FYYILSKGKHPF 240
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/190 (18%), Positives = 85/190 (44%), Gaps = 19/190 (10%)
Query: 38 ERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYN 97
++ + E+++M L HP ++ L +K +I+E++ G+L ++
Sbjct: 91 DKYTVKNEISIMNQLH-HPKLINLHDAFEDKYEMVLILEFLSGGEL------------FD 137
Query: 98 NMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL--IGENHCCKVADFGF 155
+ + ++ ++ ++ Q G++ + I+H D+ N++ + K+ DFG
Sbjct: 138 RIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGL 197
Query: 156 ARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGM 215
A L + + + + APE + +D+W+ GVL + +++ G +P+ G
Sbjct: 198 ATKLNPDEIVKVTTAT---AEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS-GLSPFAGE 253
Query: 216 AAAEVMKKSK 225
E ++ K
Sbjct: 254 DDLETLQNVK 263
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 43/210 (20%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKT-LDPHPNVVRLLGCCTEKE----PF 71
RG E VAVK RE +E + +T + H N++ + +
Sbjct: 31 RGEE----VAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 82
Query: 72 FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARG-----MQFLS 126
+++ +Y +G L +L RY ++T + A G M+ +
Sbjct: 83 WLVSDYHEHGSLFDYL-----NRY---------TVTVEGMIKLALSTASGLAHLHMEIVG 128
Query: 127 SRG---IIHRDLAARNVLIGENHCCKVADFGFA--RDLMTSSVYERKSEGRLPIRWMAPE 181
++G I HRDL ++N+L+ +N C +AD G A D T ++ + R+MAPE
Sbjct: 129 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 188
Query: 182 SLYDNI----FSV--KSDIWSFGVLIWEIV 205
L D+I F ++DI++ G++ WEI
Sbjct: 189 VLDDSINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 43/209 (20%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKT-LDPHPNVVRLLGCCTEKE----PF 71
RG E VAVK RE +E + +T + H N++ + +
Sbjct: 28 RGEE----VAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 79
Query: 72 FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARG-----MQFLS 126
+++ +Y +G L +L RY ++T + A G M+ +
Sbjct: 80 WLVSDYHEHGSLFDYL-----NRY---------TVTVEGMIKLALSTASGLAHLHMEIVG 125
Query: 127 SRG---IIHRDLAARNVLIGENHCCKVADFGFA--RDLMTSSVYERKSEGRLPIRWMAPE 181
++G I HRDL ++N+L+ +N C +AD G A D T ++ + R+MAPE
Sbjct: 126 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 185
Query: 182 SLYDNI----FSV--KSDIWSFGVLIWEI 204
L D+I F ++DI++ G++ WEI
Sbjct: 186 VLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 34/183 (18%)
Query: 49 MKTLDPHPNVVRLLGCCTE----KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 104
M L HPN++RL+ C K ++++ + G L + + + K N
Sbjct: 79 MHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIE---------RLKDKGN 129
Query: 105 SLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSV 164
LT + + RG++ + ++G HRDL N+L+G+ + D G
Sbjct: 130 FLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVE 189
Query: 165 YERK-------SEGRLPIRWMAPESLYDNIFSVKS--------DIWSFGVLIWEIVTLGS 209
R+ + R I + APE +FSV+S D+WS G +++ ++ G
Sbjct: 190 GSRQALTLQDWAAQRCTISYRAPE-----LFSVQSHCVIDERTDVWSLGCVLYAMM-FGE 243
Query: 210 TPY 212
PY
Sbjct: 244 GPY 246
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 43/210 (20%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKT-LDPHPNVVRLLGCCTEKE----PF 71
RG E VAVK RE +E + +T + H N++ + +
Sbjct: 64 RGEE----VAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 115
Query: 72 FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARG-----MQFLS 126
+++ +Y +G L +L RY ++T + A G M+ +
Sbjct: 116 WLVSDYHEHGSLFDYL-----NRY---------TVTVEGMIKLALSTASGLAHLHMEIVG 161
Query: 127 SRG---IIHRDLAARNVLIGENHCCKVADFGFA--RDLMTSSVYERKSEGRLPIRWMAPE 181
++G I HRDL ++N+L+ +N C +AD G A D T ++ + R+MAPE
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 221
Query: 182 SLYDNI----FSV--KSDIWSFGVLIWEIV 205
L D+I F ++DI++ G++ WEI
Sbjct: 222 VLDDSINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 43/209 (20%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKT-LDPHPNVVRLLGCCTEKE----PF 71
RG E VAVK RE +E + +T + H N++ + +
Sbjct: 51 RGEE----VAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 102
Query: 72 FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARG-----MQFLS 126
+++ +Y +G L +L RY ++T + A G M+ +
Sbjct: 103 WLVSDYHEHGSLFDYL-----NRY---------TVTVEGMIKLALSTASGLAHLHMEIVG 148
Query: 127 SRG---IIHRDLAARNVLIGENHCCKVADFGFA--RDLMTSSVYERKSEGRLPIRWMAPE 181
++G I HRDL ++N+L+ +N C +AD G A D T ++ + R+MAPE
Sbjct: 149 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 208
Query: 182 SLYDNI----FSV--KSDIWSFGVLIWEI 204
L D+I F ++DI++ G++ WEI
Sbjct: 209 VLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 43/209 (20%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKT-LDPHPNVVRLLGCCTEKE----PF 71
RG E VAVK RE +E + +T + H N++ + +
Sbjct: 26 RGEE----VAVKIF----SSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 77
Query: 72 FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARG-----MQFLS 126
+++ +Y +G L +L RY ++T + A G M+ +
Sbjct: 78 WLVSDYHEHGSLFDYL-----NRY---------TVTVEGMIKLALSTASGLAHLHMEIVG 123
Query: 127 SRG---IIHRDLAARNVLIGENHCCKVADFGFA--RDLMTSSVYERKSEGRLPIRWMAPE 181
++G I HRDL ++N+L+ +N C +AD G A D T ++ + R+MAPE
Sbjct: 124 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 183
Query: 182 SLYDNI----FSV--KSDIWSFGVLIWEI 204
L D+I F ++DI++ G++ WEI
Sbjct: 184 VLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 12/86 (13%)
Query: 129 GIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLP----IRWMAPESLY 184
I HRD +RNVL+ N C +AD G A +M S + G P R+MAPE L
Sbjct: 133 AIAHRDFKSRNVLVKSNLQCCIADLGLA--VMHSQGSDYLDIGNNPRVGTKRYMAPEVLD 190
Query: 185 DNIFS------VKSDIWSFGVLIWEI 204
+ I + +DIW+FG+++WEI
Sbjct: 191 EQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 20/189 (10%)
Query: 29 TLKENAGERERLDLLQELTVMKTLDPHPNVVRL--LGCCTEKEPFFVIMEYVPYG--KLQ 84
LK+ G + +E+ +++ L HPNV+ L + +++ +Y + +
Sbjct: 52 ALKQIEGTGISMSACREIALLRELK-HPNVISLQKVFLSHADRKVWLLFDYAEHDLWHII 110
Query: 85 SFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI-- 142
F R+S+A + K L + S YQ+ G+ +L + ++HRDL N+L+
Sbjct: 111 KFHRASKANK-------KPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMG 163
Query: 143 --GENHCCKVADFGFARDLMTSSVYERKSEGRLPIR--WMAPESLYDNIFSVKS-DIWSF 197
E K+AD GFAR L S + + + + APE L K+ DIW+
Sbjct: 164 EGPERGRVKIADMGFAR-LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAI 222
Query: 198 GVLIWEIVT 206
G + E++T
Sbjct: 223 GCIFAELLT 231
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 43/209 (20%)
Query: 17 RGREGPCIVAVKTLKENAGERERLDLLQELTVMKT-LDPHPNVVRLLGCCTEKE----PF 71
RG E VAVK RE +E + +T + H N++ + +
Sbjct: 25 RGEE----VAVKIF----SSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76
Query: 72 FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARG-----MQFLS 126
+++ +Y +G L +L RY ++T + A G M+ +
Sbjct: 77 WLVSDYHEHGSLFDYL-----NRY---------TVTVEGMIKLALSTASGLAHLHMEIVG 122
Query: 127 SRG---IIHRDLAARNVLIGENHCCKVADFGFA--RDLMTSSVYERKSEGRLPIRWMAPE 181
++G I HRDL ++N+L+ +N C +AD G A D T ++ + R+MAPE
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 182
Query: 182 SLYDNI----FSV--KSDIWSFGVLIWEI 204
L D+I F ++DI++ G++ WEI
Sbjct: 183 VLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 77/192 (40%), Gaps = 29/192 (15%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 102
L E+ ++ D HPNV+R C + F I + LQ + S + +
Sbjct: 56 LMEIKLLTESDDHPNVIRYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKE 114
Query: 103 SNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI-------------GENHCCK 149
N + S Q+A G+ L S IIHRDL +N+L+ EN
Sbjct: 115 YNPI------SLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168
Query: 150 VADFGFARDLMTSSVYERKSEGRLPIR--WMAPESLYD-NIFSVKS------DIWSFGVL 200
++DFG + L + R + W APE L + N K DI+S G +
Sbjct: 169 ISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228
Query: 201 IWEIVTLGSTPY 212
+ I++ G P+
Sbjct: 229 FYYILSKGKHPF 240
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 56 PNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 115
P VV+L + +++MEY+P G L + + + + +
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF--------------YT 179
Query: 116 YQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLPI 175
+V + + S G IHRD+ N+L+ ++ K+ADFG + + + P
Sbjct: 180 AEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTP- 238
Query: 176 RWMAPESLY----DNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
+++PE L D + + D WS GV ++E++ +G TP+
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML-VGDTPF 278
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 28/165 (16%)
Query: 56 PNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRS----SRAQRYYNNMHGKSNSLTSRDL 111
P VV+L + +++MEY+P G L + + + + R+Y
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFY--------------- 178
Query: 112 TSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEG 171
+V + + S G IHRD+ N+L+ ++ K+ADFG + + +
Sbjct: 179 ---TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 235
Query: 172 RLPIRWMAPESLY----DNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
P +++PE L D + + D WS GV ++E++ +G TP+
Sbjct: 236 GTP-DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML-VGDTPF 278
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 89/179 (49%), Gaps = 25/179 (13%)
Query: 40 LDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNM 99
L++ E+ ++K L+ HP ++++ + E +++++E + G+L ++ +
Sbjct: 185 LNVETEIEILKKLN-HPCIIKIKNF-FDAEDYYIVLELMEGGEL------------FDKV 230
Query: 100 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG---ENHCCKVADFGFA 156
G + L + YQ+ +Q+L GIIHRDL NVL+ E+ K+ DFG +
Sbjct: 231 VG-NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 289
Query: 157 RDLMTSSVYERKSEGRLPIRWMAPESLYD---NIFSVKSDIWSFGVLIWEIVTLGSTPY 212
+ L +S+ ++ P ++APE L ++ D WS GV+++ I G P+
Sbjct: 290 KILGETSLM--RTLCGTPT-YLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPF 344
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 28/165 (16%)
Query: 56 PNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRS----SRAQRYYNNMHGKSNSLTSRDL 111
P VV+L + +++MEY+P G L + + + + R+Y
Sbjct: 129 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFY--------------- 173
Query: 112 TSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEG 171
+V + + S G IHRD+ N+L+ ++ K+ADFG + + +
Sbjct: 174 ---TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 230
Query: 172 RLPIRWMAPESLY----DNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
P +++PE L D + + D WS GV ++E++ +G TP+
Sbjct: 231 GTP-DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML-VGDTPF 273
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 89/179 (49%), Gaps = 25/179 (13%)
Query: 40 LDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNM 99
L++ E+ ++K L+ HP ++++ + E +++++E + G+L ++ +
Sbjct: 199 LNVETEIEILKKLN-HPCIIKIKNF-FDAEDYYIVLELMEGGEL------------FDKV 244
Query: 100 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG---ENHCCKVADFGFA 156
G + L + YQ+ +Q+L GIIHRDL NVL+ E+ K+ DFG +
Sbjct: 245 VG-NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 303
Query: 157 RDLMTSSVYERKSEGRLPIRWMAPESLYD---NIFSVKSDIWSFGVLIWEIVTLGSTPY 212
+ L +S+ ++ P ++APE L ++ D WS GV+++ I G P+
Sbjct: 304 KILGETSLM--RTLCGTPT-YLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPF 358
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
QE+ +MK+LD HPN++RL + +++ME G+L + R R +
Sbjct: 55 QEIEIMKSLD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMK 113
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI---GENHCCKVADFGFARDLM 160
+ L++ ++C+++ + HRDL N L + K+ DFG A
Sbjct: 114 DVLSA---VAYCHKL----------NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160
Query: 161 TSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEV 220
+ K +++P+ L + ++ + D WS GV+++ ++ G P+ EV
Sbjct: 161 PGKMMRTKVGTPY---YVSPQVL-EGLYGPECDEWSAGVMMY-VLLCGYPPFSAPTDXEV 215
Query: 221 MKK 223
M K
Sbjct: 216 MLK 218
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 93/198 (46%), Gaps = 23/198 (11%)
Query: 18 GREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEY 77
G+E ++ + T K +A + ++L+ +E + + L HPN+VRL +E+ ++I +
Sbjct: 36 GQEYAAMI-INTKKLSARDHQKLE--REARICRLLK-HPNIVRLHDSISEEGHHYLIFDL 91
Query: 78 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAA 137
V G+L A+ YY+ D + Q+ + G++HR+L
Sbjct: 92 VTGGEL---FEDIVAREYYSEA----------DASHCIQQILEAVLHCHQMGVVHRNLKP 138
Query: 138 RNVLIG---ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDI 194
N+L+ + K+ADFG A ++ G +++PE L + + D+
Sbjct: 139 ENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPG--YLSPEVLRKDPYGKPVDL 196
Query: 195 WSFGVLIWEIVTLGSTPY 212
W+ GV+++ I+ +G P+
Sbjct: 197 WACGVILY-ILLVGYPPF 213
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 44 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 103
QE+ +MK+LD HPN++RL + +++ME G+L + R R +
Sbjct: 72 QEIEIMKSLD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMK 130
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI---GENHCCKVADFGFARDLM 160
+ L++ ++C+++ + HRDL N L + K+ DFG A
Sbjct: 131 DVLSA---VAYCHKL----------NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 177
Query: 161 TSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEV 220
+ K +++P+ L + ++ + D WS GV+++ ++ G P+ EV
Sbjct: 178 PGKMMRTKVGTPY---YVSPQVL-EGLYGPECDEWSAGVMMY-VLLCGYPPFSAPTDXEV 232
Query: 221 MKK 223
M K
Sbjct: 233 MLK 235
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 83/213 (38%), Gaps = 40/213 (18%)
Query: 23 CIVAVKTLKEN-AGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
CI A+K K+ AG + + L+E+ L H +VVR E + + EY G
Sbjct: 33 CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGG 92
Query: 82 KLQSFLRSS-RAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
L + + R Y+ +L QV RG++++ S ++H D+ N+
Sbjct: 93 SLADAISENYRIMSYFKEA----------ELKDLLLQVGRGLRYIHSMSLVHMDIKPSNI 142
Query: 141 LIGENHC-------------------CKVADFGFARDLMTSSVYERKSEGRLPIRWMAPE 181
I K+ D G + + V E S R++A E
Sbjct: 143 FISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS------RFLANE 196
Query: 182 SLYDNIFSV-KSDIWSFGVLIWEIVTLGSTPYP 213
L +N + K+DI++ + + + G+ P P
Sbjct: 197 VLQENYTHLPKADIFALALTV--VXAAGAEPLP 227
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 83/213 (38%), Gaps = 40/213 (18%)
Query: 23 CIVAVKTLKEN-AGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
CI A+K K+ AG + + L+E+ L H +VVR E + + EY G
Sbjct: 37 CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGG 96
Query: 82 KLQSFLRSS-RAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
L + + R Y+ +L QV RG++++ S ++H D+ N+
Sbjct: 97 SLADAISENYRIMSYFKEA----------ELKDLLLQVGRGLRYIHSMSLVHMDIKPSNI 146
Query: 141 LIGENHC-------------------CKVADFGFARDLMTSSVYERKSEGRLPIRWMAPE 181
I K+ D G + + V E S R++A E
Sbjct: 147 FISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS------RFLANE 200
Query: 182 SLYDNIFSV-KSDIWSFGVLIWEIVTLGSTPYP 213
L +N + K+DI++ + + + G+ P P
Sbjct: 201 VLQENYTHLPKADIFALALTV--VCAAGAEPLP 231
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 114 FCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRL 173
+ Q+ G++ L R II+RDL NVL+ ++ +++D G A +L + G
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGT- 352
Query: 174 PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVT 206
+MAPE L + D ++ GV ++E++
Sbjct: 353 -PGFMAPELLLGEEYDFSVDYFALGVTLYEMIA 384
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 90/215 (41%), Gaps = 36/215 (16%)
Query: 17 RGREGPCIVAVKTLKENA--GERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVI 74
R + AVK L++ A ++E ++ E V+ HP +V L + + +
Sbjct: 58 RHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117
Query: 75 MEYVPYGKLQSFLRSSRA-----QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRG 129
++Y+ G+L L+ R R+Y ++A + +L S
Sbjct: 118 LDYINGGELFYHLQRERCFLEPRARFY------------------AAEIASALGYLHSLN 159
Query: 130 IIHRDLAARNVLIGENHCCKVADFGFARDLM----TSSVYERKSEGRLPIRWMAPESLYD 185
I++RDL N+L+ + DFG ++ + T+S + E ++APE L+
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPE------YLAPEVLHK 213
Query: 186 NIFSVKSDIWSFGVLIWEIVTLGSTPYPGMAAAEV 220
+ D W G +++E++ G P+ AE+
Sbjct: 214 QPYDRTVDWWCLGAVLYEML-YGLPPFYSRNTAEM 247
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 114 FCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRL 173
+ Q+ G++ L R II+RDL NVL+ ++ +++D G A +L + G
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGT- 352
Query: 174 PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVT 206
+MAPE L + D ++ GV ++E++
Sbjct: 353 -PGFMAPELLLGEEYDFSVDYFALGVTLYEMIA 384
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 83/213 (38%), Gaps = 40/213 (18%)
Query: 23 CIVAVKTLKEN-AGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
CI A+K K+ AG + + L+E+ L H +VVR E + + EY G
Sbjct: 35 CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGG 94
Query: 82 KLQSFLRSS-RAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
L + + R Y+ +L QV RG++++ S ++H D+ N+
Sbjct: 95 SLADAISENYRIMSYFKEA----------ELKDLLLQVGRGLRYIHSMSLVHMDIKPSNI 144
Query: 141 LIGENHC-------------------CKVADFGFARDLMTSSVYERKSEGRLPIRWMAPE 181
I K+ D G + + V E S R++A E
Sbjct: 145 FISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS------RFLANE 198
Query: 182 SLYDNIFSV-KSDIWSFGVLIWEIVTLGSTPYP 213
L +N + K+DI++ + + + G+ P P
Sbjct: 199 VLQENYTHLPKADIFALALTV--VCAAGAEPLP 229
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 114 FCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRL 173
+ Q+ G++ L R II+RDL NVL+ ++ +++D G A +L + G
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGT- 352
Query: 174 PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVT 206
+MAPE L + D ++ GV ++E++
Sbjct: 353 -PGFMAPELLLGEEYDFSVDYFALGVTLYEMIA 384
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 83/213 (38%), Gaps = 40/213 (18%)
Query: 23 CIVAVKTLKEN-AGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYG 81
CI A+K K+ AG + + L+E+ L H +VVR E + + EY G
Sbjct: 35 CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGG 94
Query: 82 KLQSFLRSS-RAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNV 140
L + + R Y+ +L QV RG++++ S ++H D+ N+
Sbjct: 95 SLADAISENYRIMSYFKEA----------ELKDLLLQVGRGLRYIHSMSLVHMDIKPSNI 144
Query: 141 LIGENHC-------------------CKVADFGFARDLMTSSVYERKSEGRLPIRWMAPE 181
I K+ D G + + V E S R++A E
Sbjct: 145 FISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS------RFLANE 198
Query: 182 SLYDNIFSV-KSDIWSFGVLIWEIVTLGSTPYP 213
L +N + K+DI++ + + + G+ P P
Sbjct: 199 VLQENYTHLPKADIFALALTV--VCAAGAEPLP 229
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 114 FCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRL 173
+ Q+ G++ L R II+RDL NVL+ ++ +++D G A +L + G
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGT- 352
Query: 174 PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVT 206
+MAPE L + D ++ GV ++E++
Sbjct: 353 -PGFMAPELLLGEEYDFSVDYFALGVTLYEMIA 384
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 29/209 (13%)
Query: 25 VAVKTLKENAGERERLDLLQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
V V+ + A E + LQ EL V K + HPN+V +V+ ++ YG
Sbjct: 39 VTVRRINLEACSNEMVTFLQGELHVSKLFN-HPNIVPYRATFIADNELWVVTSFMAYGSA 97
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
+ + + + M N L + V + + ++ G +HR + A ++LI
Sbjct: 98 KDLI----CTHFMDGM----NELA---IAYILQGVLKALDYIHHMGYVHRSVKASHILIS 146
Query: 144 ENHCCKVADFGFARDLMTSSVYERK---------SEGRLPIRWMAPESLYDNI--FSVKS 192
+ KV G +L S +R+ S LP W++PE L N+ + KS
Sbjct: 147 VD--GKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLP--WLSPEVLQQNLQGYDAKS 202
Query: 193 DIWSFGVLIWEIVTLGSTPYPGMAAAEVM 221
DI+S G+ E+ G P+ M A +++
Sbjct: 203 DIYSVGITACELAN-GHVPFKDMPATQML 230
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 28/207 (13%)
Query: 26 AVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQS 85
AVK +++ G R + +E+ ++ H NV+ L+ E++ F+++ E + G + S
Sbjct: 42 AVKIIEKQPGHI-RSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILS 100
Query: 86 FLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLI--- 142
+ +R++N + S+ +D VA + FL ++GI HRDL N+L
Sbjct: 101 HIHK---RRHFNELEA---SVVVQD-------VASALDFLHNKGIAHRDLKPENILCEHP 147
Query: 143 GENHCCKVADFGFARDLMTSSVYERKSEGRL-----PIRWMAPE-----SLYDNIFSVKS 192
+ K+ DF + + S L +MAPE S +I+ +
Sbjct: 148 NQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRC 207
Query: 193 DIWSFGVLIWEIVTLGSTPYPGMAAAE 219
D+WS GV+++ I+ G P+ G ++
Sbjct: 208 DLWSLGVILY-ILLSGYPPFVGRCGSD 233
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 22/189 (11%)
Query: 27 VKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF 86
+ T K +A + ++L+ +E + + L H N+VRL +E+ +++ + V G+L
Sbjct: 37 INTKKLSARDHQKLE--REARICRLLK-HSNIVRLHDSISEEGFHYLVFDLVTGGEL--- 90
Query: 87 LRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG--- 143
A+ YY+ D + Q+ + G++HRDL N+L+
Sbjct: 91 FEDIVAREYYSEA----------DASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKC 140
Query: 144 ENHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWE 203
+ K+ADFG A ++ G +++PE L + DIW+ GV+++
Sbjct: 141 KGAAVKLADFGLAIEVQGDQQAWFGFAG--TPGYLSPEVLRKEAYGKPVDIWACGVILY- 197
Query: 204 IVTLGSTPY 212
I+ +G P+
Sbjct: 198 ILLVGYPPF 206
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 21/123 (17%)
Query: 106 LTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL------ 159
LT + + Y + G F+ GIIHRDL N L+ ++ KV DFG AR +
Sbjct: 126 LTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDT 185
Query: 160 -MTSSVYERKSEG------------RLPIRWM-APE-SLYDNIFSVKSDIWSFGVLIWEI 204
+ + + E + G + RW APE L ++ DIWS G + E+
Sbjct: 186 NIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAEL 245
Query: 205 VTL 207
+ +
Sbjct: 246 LNM 248
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 29/209 (13%)
Query: 25 VAVKTLKENAGERERLDLLQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 83
V V+ + A E + LQ EL V K + HPN+V +V+ ++ YG
Sbjct: 55 VTVRRINLEACSNEMVTFLQGELHVSKLFN-HPNIVPYRATFIADNELWVVTSFMAYGSA 113
Query: 84 QSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG 143
+ + + + M N L + V + + ++ G +HR + A ++LI
Sbjct: 114 KDLI----CTHFMDGM----NELA---IAYILQGVLKALDYIHHMGYVHRSVKASHILIS 162
Query: 144 ENHCCKVADFGFARDLMTSSVYERK---------SEGRLPIRWMAPESLYDNI--FSVKS 192
+ KV G +L S +R+ S LP W++PE L N+ + KS
Sbjct: 163 VD--GKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLP--WLSPEVLQQNLQGYDAKS 218
Query: 193 DIWSFGVLIWEIVTLGSTPYPGMAAAEVM 221
DI+S G+ E+ G P+ M A +++
Sbjct: 219 DIYSVGITACELAN-GHVPFKDMPATQML 246
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 21/168 (12%)
Query: 42 LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL---QSFLRSSRAQRYYNN 98
+L+E+ ++ HPN++ L FV E KL +R+ AQ
Sbjct: 76 VLREIRLLNHFH-HPNILGL-------RDIFVHFEEPAMHKLYLVTELMRTDLAQV---- 123
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARD 158
+H + ++ + + F Y + G+ L G++HRDL N+L+ +N+ + DF AR+
Sbjct: 124 IHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARE 183
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEI 204
+ + RW APE + F+ D+WS G ++ E+
Sbjct: 184 ----DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEM 227
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 21/168 (12%)
Query: 42 LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL---QSFLRSSRAQRYYNN 98
+L+E+ ++ HPN++ L FV E KL +R+ AQ
Sbjct: 76 VLREIRLLNHFH-HPNILGL-------RDIFVHFEEPAMHKLYLVTELMRTDLAQV---- 123
Query: 99 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARD 158
+H + ++ + + F Y + G+ L G++HRDL N+L+ +N+ + DF AR+
Sbjct: 124 IHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARE 183
Query: 159 LMTSSVYERKSEGRLPIRWM-APESLYD-NIFSVKSDIWSFGVLIWEI 204
+ + RW APE + F+ D+WS G ++ E+
Sbjct: 184 ----DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEM 227
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 26/200 (13%)
Query: 16 ERGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIM 75
++G + P A+K LK+ ++ + E+ V+ L HPN+++L +++
Sbjct: 74 QKGTQKP--YALKVLKKTVDKK---IVRTEIGVLLRLS-HPNIIKLKEIFETPTEISLVL 127
Query: 76 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDL 135
E V G+L F R Y + RD Q+ + +L GI+HRDL
Sbjct: 128 ELVTGGEL--FDRIVEKGYY-----------SERDAADAVKQILEAVAYLHENGIVHRDL 174
Query: 136 AARNVLIGE---NHCCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYDNIFSVKS 192
N+L + K+ADFG ++ ++ V + G + APE L + +
Sbjct: 175 KPENLLYATPAPDAPLKIADFGLSK-IVEHQVLMKTVCGT--PGYCAPEILRGCAYGPEV 231
Query: 193 DIWSFGVLIWEIVTLGSTPY 212
D+WS G++ + I+ G P+
Sbjct: 232 DMWSVGIITY-ILLCGFEPF 250
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 37/188 (19%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPF--FVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
++E V+K L+ H N+V+L E +IME+ P G L + L +N +
Sbjct: 55 MREFEVLKKLN-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP------SNAY 107
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL--IGEN--HCCKVADFGFA 156
G L + V GM L GI+HR++ N++ IGE+ K+ DFG A
Sbjct: 108 G----LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163
Query: 157 RDLMTS----SVYERKSEGRLPIRWMAPESL--------YDNIFSVKSDIWSFGVLIWEI 204
R+L S+Y + ++ P+ + + D+WS GV +
Sbjct: 164 RELEDDEQFVSLYGTE-------EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHA 216
Query: 205 VTLGSTPY 212
T GS P+
Sbjct: 217 AT-GSLPF 223
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 20/179 (11%)
Query: 41 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL-QSFLRSSRAQRYYNNM 99
DL +E ++ L HP++V LL + +++ E++ L ++ + A Y
Sbjct: 72 DLKREASICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY--- 127
Query: 100 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIG--ENHC-CKVADFGFA 156
S ++ S + Q+ +++ IIHRD+ NVL+ EN K+ DFG A
Sbjct: 128 ---SEAVASH----YMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA 180
Query: 157 RDLMTSSVYERKSEGRLPI-RWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPYPG 214
L S + + GR+ +MAPE + + D+W GV+++ I+ G P+ G
Sbjct: 181 IQLGESGLV---AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILF-ILLSGCLPFYG 235
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 105 SLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENH-CCKVADFGFARDLMTSS 163
+LT D+ + Y++ + + + S GI+HRD+ NVLI H ++ D+G A
Sbjct: 127 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQ 186
Query: 164 VYERKSEGRLPIRWMAPESLYD-NIFSVKSDIWSFGVLIWEIV 205
Y + R + PE L D ++ D+WS G ++ ++
Sbjct: 187 EYNVRVASRY---FKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 80/188 (42%), Gaps = 26/188 (13%)
Query: 20 EGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVP 79
E + +K +K+N +RE + +++ L PN++ L K+P + P
Sbjct: 63 EKVVVKILKPVKKNKIKRE-------IKILENLRGGPNIITLADIV--KDP----VSRTP 109
Query: 80 YGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARN 139
+ + Q Y +LT D+ + Y++ + + + S GI+HRD+ N
Sbjct: 110 ALVFEHVNNTDFKQLY--------QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN 161
Query: 140 VLIGENH-CCKVADFGFARDLMTSSVYERKSEGRLPIRWMAPESLYD-NIFSVKSDIWSF 197
V+I H ++ D+G A Y + R + PE L D ++ D+WS
Sbjct: 162 VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELLVDYQMYDYSLDMWSL 218
Query: 198 GVLIWEIV 205
G ++ ++
Sbjct: 219 GCMLASMI 226
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 80/189 (42%), Gaps = 39/189 (20%)
Query: 43 LQELTVMKTLDPHPNVVRLLGCCTEKEPF--FVIMEYVPYGKLQSFLRSSRAQRYYNNMH 100
++E V+K L+ H N+V+L E +IME+ P G L + L +N +
Sbjct: 55 MREFEVLKKLN-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP------SNAY 107
Query: 101 GKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVL--IGEN--HCCKVADFGFA 156
G L + V GM L GI+HR++ N++ IGE+ K+ DFG A
Sbjct: 108 G----LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163
Query: 157 RDLMTSSVYERKSEGRLPIRWMAPESLYDNI-------------FSVKSDIWSFGVLIWE 203
R+L + + + + E L+ ++ + D+WS GV +
Sbjct: 164 REL--------EDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYH 215
Query: 204 IVTLGSTPY 212
T GS P+
Sbjct: 216 AAT-GSLPF 223
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 104 NSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGE---NHCCKVADFGFARDLM 160
+ T R+ + + +Q+L S I HRD+ N+L N K+ DFGFA++
Sbjct: 156 QAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-- 213
Query: 161 TSSVYERKSEGRLPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
T+S + P ++APE L + D WS GV+ + I+ G P+
Sbjct: 214 TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDXWSLGVIXY-ILLCGYPPF 263
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 22/198 (11%)
Query: 42 LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQR--YYNNM 99
+L E+ ++ +L+ H VVR E+ F V K F++ + Y+ +
Sbjct: 49 ILSEVXLLASLN-HQYVVRYYAAWLERRNFVKPXTAVK-KKSTLFIQXEYCENRTLYDLI 106
Query: 100 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDL 159
H ++ + + Q+ + ++ S+GIIHR+L N+ I E+ K+ DFG A+++
Sbjct: 107 HSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNV 166
Query: 160 MTSSVYERKSEGRLP------------IRWMAPESLYDNI--FSVKSDIWSFGVLIWEIV 205
S + LP ++A E L D ++ K D +S G++ +E +
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVL-DGTGHYNEKIDXYSLGIIFFEXI 225
Query: 206 TLGSTPYPGMAAAEVMKK 223
ST G ++KK
Sbjct: 226 YPFST---GXERVNILKK 240
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 105 SLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENH-CCKVADFGFARDLMTSS 163
+LT D+ + Y++ + + + S GI+HRD+ NV+I H ++ D+G A
Sbjct: 127 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 186
Query: 164 VYERKSEGRLPIRWMAPESLYD-NIFSVKSDIWSFGVLIWEIV 205
Y + R + PE L D ++ D+WS G ++ ++
Sbjct: 187 EYNVRVASRY---FKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 105 SLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENH-CCKVADFGFARDLMTSS 163
+LT D+ + Y++ + + + S GI+HRD+ NV+I H ++ D+G A
Sbjct: 132 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 191
Query: 164 VYERKSEGRLPIRWMAPESLYD-NIFSVKSDIWSFGVLIWEIV 205
Y + R + PE L D ++ D+WS G ++ ++
Sbjct: 192 EYNVRVASRY---FKGPELLVDYQMYDYSLDMWSLGCMLASMI 231
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 105 SLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENH-CCKVADFGFARDLMTSS 163
+LT D+ + Y++ + + + S GI+HRD+ NV+I H ++ D+G A
Sbjct: 127 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 186
Query: 164 VYERKSEGRLPIRWMAPESLYD-NIFSVKSDIWSFGVLIWEIV 205
Y + R + PE L D ++ D+WS G ++ ++
Sbjct: 187 EYNVRVASRY---FKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 105 SLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENH-CCKVADFGFARDLMTSS 163
+LT D+ + Y++ + + + S GI+HRD+ NV+I H ++ D+G A
Sbjct: 127 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 186
Query: 164 VYERKSEGRLPIRWMAPESLYD-NIFSVKSDIWSFGVLIWEIV 205
Y + R + PE L D ++ D+WS G ++ ++
Sbjct: 187 EYNVRVASRY---FKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 105 SLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENH-CCKVADFGFARDLMTSS 163
+LT D+ + Y++ + + + S GI+HRD+ NV+I H ++ D+G A
Sbjct: 127 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 186
Query: 164 VYERKSEGRLPIRWMAPESLYD-NIFSVKSDIWSFGVLIWEIV 205
Y + R + PE L D ++ D+WS G ++ ++
Sbjct: 187 EYNVRVASRY---FKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 105 SLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENH-CCKVADFGFARDLMTSS 163
+LT D+ + Y++ + + + S GI+HRD+ NV+I H ++ D+G A
Sbjct: 127 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 186
Query: 164 VYERKSEGRLPIRWMAPESLYD-NIFSVKSDIWSFGVLIWEIV 205
Y + R + PE L D ++ D+WS G ++ ++
Sbjct: 187 EYNVRVASRY---FKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 105 SLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENH-CCKVADFGFARDLMTSS 163
+LT D+ + Y++ + + + S GI+HRD+ NV+I H ++ D+G A
Sbjct: 127 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 186
Query: 164 VYERKSEGRLPIRWMAPESLYD-NIFSVKSDIWSFGVLIWEIV 205
Y + R + PE L D ++ D+WS G ++ ++
Sbjct: 187 EYNVRVASRY---FKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 105 SLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENH-CCKVADFGFARDLMTSS 163
+LT D+ + Y++ + + + S GI+HRD+ NV+I H ++ D+G A
Sbjct: 125 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 184
Query: 164 VYERKSEGRLPIRWMAPESLYD-NIFSVKSDIWSFGVLIWEIV 205
Y + R + PE L D ++ D+WS G ++ ++
Sbjct: 185 EYNVRVASRY---FKGPELLVDYQMYDYSLDMWSLGCMLASMI 224
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 105 SLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENH-CCKVADFGFARDLMTSS 163
+LT D+ + Y++ + + + S GI+HRD+ NV+I H ++ D+G A
Sbjct: 127 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 186
Query: 164 VYERKSEGRLPIRWMAPESLYD-NIFSVKSDIWSFGVLIWEIV 205
Y + R + PE L D ++ D+WS G ++ ++
Sbjct: 187 EYNVRVASRY---FKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 105 SLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENH-CCKVADFGFARDLMTSS 163
+LT D+ + Y++ + + + S GI+HRD+ NV+I H ++ D+G A
Sbjct: 126 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 185
Query: 164 VYERKSEGRLPIRWMAPESLYD-NIFSVKSDIWSFGVLIWEIV 205
Y + R + PE L D ++ D+WS G ++ ++
Sbjct: 186 EYNVRVASRY---FKGPELLVDYQMYDYSLDMWSLGCMLASMI 225
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 105 SLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENH-CCKVADFGFARDLMTSS 163
+LT D+ + Y++ + + + S GI+HRD+ NV+I H ++ D+G A
Sbjct: 127 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 186
Query: 164 VYERKSEGRLPIRWMAPESLYD-NIFSVKSDIWSFGVLIWEIV 205
Y + R + PE L D ++ D+WS G ++ ++
Sbjct: 187 EYNVRVASRY---FKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 105 SLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENH-CCKVADFGFARDLMTSS 163
+LT D+ + Y++ + + + S GI+HRD+ NV+I H ++ D+G A
Sbjct: 126 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 185
Query: 164 VYERKSEGRLPIRWMAPESLYD-NIFSVKSDIWSFGVLIWEIV 205
Y + R + PE L D ++ D+WS G ++ ++
Sbjct: 186 EYNVRVASRY---FKGPELLVDYQMYDYSLDMWSLGCMLASMI 225
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 105 SLTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENH-CCKVADFGFARDLMTSS 163
+LT D+ + Y++ + + + S GI+HRD+ NV+I H ++ D+G A
Sbjct: 127 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 186
Query: 164 VYERKSEGRLPIRWMAPESLYD-NIFSVKSDIWSFGVLIWEIV 205
Y + R + PE L D ++ D+WS G ++ ++
Sbjct: 187 EYNVRVASRY---FKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 114 FCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRL 173
+ ++ G++ L I++RDL N+L+ ++ +++D G A + +GR+
Sbjct: 291 YAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI----KGRV 346
Query: 174 -PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
+ +MAPE + + ++ D W+ G L++E++ G +P+
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA-GQSPF 385
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 114 FCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRL 173
+ ++ G++ L I++RDL N+L+ ++ +++D G A + +GR+
Sbjct: 291 YAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI----KGRV 346
Query: 174 -PIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
+ +MAPE + + ++ D W+ G L++E++ G +P+
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA-GQSPF 385
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 35/172 (20%)
Query: 55 HPNVVRLLGC----CTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRD 110
H N+++ +G + ++I + G L FL K+N ++ +
Sbjct: 77 HENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL--------------KANVVSWNE 122
Query: 111 LTSFCYQVARGMQFLSSR----------GIIHRDLAARNVLIGENHCCKVADFGFARDLM 160
L +ARG+ +L I HRD+ ++NVL+ N +ADFG A
Sbjct: 123 LCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF- 181
Query: 161 TSSVYERKSEGRLPI-RWMAPESLYDNI-FS----VKSDIWSFGVLIWEIVT 206
+ + G++ R+MAPE L I F ++ D+++ G+++WE+ +
Sbjct: 182 EAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 19/160 (11%)
Query: 55 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 114
HP + L + +MEY G+L F SR + + S D F
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVF------------SEDRARF 112
Query: 115 C-YQVARGMQFL-SSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGR 172
++ + +L S + +++RDL N+++ ++ K+ DFG ++ + + G
Sbjct: 113 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCG- 171
Query: 173 LPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
++APE L DN + D W GV+++E++ G P+
Sbjct: 172 -TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 209
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 19/160 (11%)
Query: 55 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 114
HP + L + +MEY G+L F SR + + S D F
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVF------------SEDRARF 113
Query: 115 C-YQVARGMQFL-SSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGR 172
++ + +L S + +++RDL N+++ ++ K+ DFG ++ + + G
Sbjct: 114 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCG- 172
Query: 173 LPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
++APE L DN + D W GV+++E++ G P+
Sbjct: 173 -TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 210
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 25/162 (15%)
Query: 55 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 114
H NVV +G C +I L S +R ++ L
Sbjct: 88 HENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKI------------VLDVNKTRQI 135
Query: 115 CYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGRLP 174
++ +GM +L ++GI+H+DL ++NV +N + DFG R+ + R+
Sbjct: 136 AQEIVKGMGYLHAKGILHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQAGRREDKLRIQ 194
Query: 175 -----------IRWMAPESLYDNI-FSVKSDIWSFGVLIWEI 204
IR ++P++ D + FS SD+++ G + +E+
Sbjct: 195 NGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 19/160 (11%)
Query: 55 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 114
HP + L + +MEY G+L F SR + + S D F
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVF------------SEDRARF 114
Query: 115 -CYQVARGMQFL-SSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGR 172
++ + +L S + +++RDL N+++ ++ K+ DFG ++ + + G
Sbjct: 115 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCG- 173
Query: 173 LPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
++APE L DN + D W GV+++E++ G P+
Sbjct: 174 -TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 211
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 99/237 (41%), Gaps = 44/237 (18%)
Query: 2 DCFSVEVRKHPMSPERGREGPC-----------IVAVKTLKENAGERERLDLLQ-ELTVM 49
+C SV+ R + + + G G I A+K + + + LD + E+ +
Sbjct: 2 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 61
Query: 50 KTLDPHPN-VVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTS 108
L H + ++RL + +++ME L S+L+ K S+
Sbjct: 62 NKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLK-------------KKKSIDP 107
Query: 109 RDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM--TSSVYE 166
+ S+ + + + GI+H DL N LI + K+ DFG A + T+SV +
Sbjct: 108 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVK 166
Query: 167 RKSEGRLPIRWMAPESLYDNIFSVKS-----------DIWSFGVLIWEIVTLGSTPY 212
G + +M PE++ D S ++ D+WS G +++ +T G TP+
Sbjct: 167 DSQVGT--VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-YMTYGKTPF 220
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 19/160 (11%)
Query: 55 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 114
HP + L + +MEY G+L F SR + + S D F
Sbjct: 207 HPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVF------------SEDRARF 252
Query: 115 -CYQVARGMQFL-SSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGR 172
++ + +L S + +++RDL N+++ ++ K+ DFG ++ + + G
Sbjct: 253 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCG- 311
Query: 173 LPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
++APE L DN + D W GV+++E++ G P+
Sbjct: 312 -TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 349
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 95/235 (40%), Gaps = 40/235 (17%)
Query: 2 DCFSVEVRKHPMSPERGREGPC-----------IVAVKTLKENAGERERLDLLQ-ELTVM 49
+C SV+ R + + + G G I A+K + + + LD + E+ +
Sbjct: 49 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 108
Query: 50 KTLDPHPN-VVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTS 108
L H + ++RL + +++ME L S+L+ K S+
Sbjct: 109 NKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLK-------------KKKSIDP 154
Query: 109 RDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERK 168
+ S+ + + + GI+H DL N LI + K+ DFG A + + K
Sbjct: 155 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVK 213
Query: 169 SEGRLPIRWMAPESLYDNIFSVKS-----------DIWSFGVLIWEIVTLGSTPY 212
+ +M PE++ D S ++ D+WS G +++ +T G TP+
Sbjct: 214 DSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-YMTYGKTPF 267
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 19/160 (11%)
Query: 55 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 114
HP + L + +MEY G+L F SR + + S D F
Sbjct: 210 HPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVF------------SEDRARF 255
Query: 115 -CYQVARGMQFL-SSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMTSSVYERKSEGR 172
++ + +L S + +++RDL N+++ ++ K+ DFG ++ + + G
Sbjct: 256 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCG- 314
Query: 173 LPIRWMAPESLYDNIFSVKSDIWSFGVLIWEIVTLGSTPY 212
++APE L DN + D W GV+++E++ G P+
Sbjct: 315 -TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 352
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 99/237 (41%), Gaps = 44/237 (18%)
Query: 2 DCFSVEVRKHPMSPERGREGPC-----------IVAVKTLKENAGERERLDLLQ-ELTVM 49
+C SV+ R + + + G G I A+K + + + LD + E+ +
Sbjct: 49 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 108
Query: 50 KTLDPHPN-VVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTS 108
L H + ++RL + +++ME L S+L+ K S+
Sbjct: 109 NKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLK-------------KKKSIDP 154
Query: 109 RDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM--TSSVYE 166
+ S+ + + + GI+H DL N LI + K+ DFG A + T+SV +
Sbjct: 155 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVK 213
Query: 167 RKSEGRLPIRWMAPESLYDNIFSVKS-----------DIWSFGVLIWEIVTLGSTPY 212
G + +M PE++ D S ++ D+WS G +++ +T G TP+
Sbjct: 214 DSQVGT--VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-YMTYGKTPF 267
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 24/126 (19%)
Query: 106 LTSRDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLMT---- 161
LT + + + Y + G +F+ GIIHRDL N L+ ++ K+ DFG AR + +
Sbjct: 128 LTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDI 187
Query: 162 ------------------SSVYERKSEGRLPIRWM-APE-SLYDNIFSVKSDIWSFGVLI 201
+ +++ + RW APE L ++ DIWS G +
Sbjct: 188 HIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIF 247
Query: 202 WEIVTL 207
E++ +
Sbjct: 248 AELLNM 253
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 99/237 (41%), Gaps = 44/237 (18%)
Query: 2 DCFSVEVRKHPMSPERGREGPC-----------IVAVKTLKENAGERERLDLLQ-ELTVM 49
+C SV+ R + + + G G I A+K + + + LD + E+ +
Sbjct: 5 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 64
Query: 50 KTLDPHPN-VVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTS 108
L H + ++RL + +++ME L S+L+ K S+
Sbjct: 65 NKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLK-------------KKKSIDP 110
Query: 109 RDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM--TSSVYE 166
+ S+ + + + GI+H DL N LI + K+ DFG A + T+SV +
Sbjct: 111 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVK 169
Query: 167 RKSEGRLPIRWMAPESLYDNIFSVKS-----------DIWSFGVLIWEIVTLGSTPY 212
G + +M PE++ D S ++ D+WS G +++ +T G TP+
Sbjct: 170 DSQVGT--VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-YMTYGKTPF 223
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 99/237 (41%), Gaps = 44/237 (18%)
Query: 2 DCFSVEVRKHPMSPERGREGPC-----------IVAVKTLKENAGERERLDLLQ-ELTVM 49
+C SV+ R + + + G G I A+K + + + LD + E+ +
Sbjct: 1 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 60
Query: 50 KTLDPHPN-VVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTS 108
L H + ++RL + +++ME L S+L+ K S+
Sbjct: 61 NKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLK-------------KKKSIDP 106
Query: 109 RDLTSFCYQVARGMQFLSSRGIIHRDLAARNVLIGENHCCKVADFGFARDLM--TSSVYE 166
+ S+ + + + GI+H DL N LI + K+ DFG A + T+SV +
Sbjct: 107 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVK 165
Query: 167 RKSEGRLPIRWMAPESLYDNIFSVKS-----------DIWSFGVLIWEIVTLGSTPY 212
G + +M PE++ D S ++ D+WS G +++ +T G TP+
Sbjct: 166 DSQVGT--VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-YMTYGKTPF 219
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,393,058
Number of Sequences: 62578
Number of extensions: 235055
Number of successful extensions: 2892
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 72
Number of HSP's that attempted gapping in prelim test: 463
Number of HSP's gapped (non-prelim): 1107
length of query: 225
length of database: 14,973,337
effective HSP length: 95
effective length of query: 130
effective length of database: 9,028,427
effective search space: 1173695510
effective search space used: 1173695510
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)