Query psy15819
Match_columns 203
No_of_seqs 156 out of 371
Neff 6.3
Searched_HMMs 29240
Date Fri Aug 16 22:09:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15819.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15819hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2f5j_A Mortality factor 4-like 100.0 9.2E-48 3.1E-52 316.1 13.5 135 67-202 9-145 (181)
2 2y0n_A MALE-specific lethal 3 100.0 8.5E-46 2.9E-50 310.9 14.3 136 67-202 11-181 (211)
3 3oa6_A MALE-specific lethal 3 99.8 8.3E-22 2.8E-26 149.0 2.4 43 1-43 61-104 (110)
4 3m9q_A Protein MALE-specific l 99.8 6.2E-21 2.1E-25 142.5 2.8 39 1-39 61-100 (101)
5 3m9p_A MALE-specific lethal 3 99.8 2.4E-20 8.4E-25 140.9 2.4 40 1-40 61-101 (110)
6 3e9g_A Chromatin modification- 99.8 9.3E-20 3.2E-24 140.6 3.2 42 1-42 77-119 (130)
7 2f5k_A MORF-related gene 15 is 99.8 1.5E-19 5.1E-24 135.3 3.0 41 1-41 54-95 (102)
8 2lrq_A Protein MRG15, NUA4 com 99.6 6.3E-20 2.2E-24 133.4 0.0 39 1-39 44-83 (85)
9 2k3y_A Chromatin modification- 99.7 1.6E-19 5.6E-24 141.2 1.6 41 1-41 79-120 (136)
10 2lcc_A AT-rich interactive dom 99.4 1.5E-14 5.1E-19 102.9 -0.1 29 1-29 41-70 (76)
11 2bud_A Males-absent on the fir 99.2 8.7E-13 3E-17 96.6 0.9 26 1-26 50-76 (92)
12 2ro0_A Histone acetyltransfera 99.1 2.4E-11 8.4E-16 89.2 1.0 21 1-21 55-76 (92)
13 2eko_A Histone acetyltransfera 99.0 3.3E-11 1.1E-15 87.6 1.3 21 1-21 46-67 (87)
14 2rnz_A Histone acetyltransfera 99.0 3.4E-11 1.2E-15 88.6 1.2 21 1-21 57-78 (94)
15 1wgs_A MYST histone acetyltran 99.0 5.5E-11 1.9E-15 92.8 1.3 23 1-23 47-70 (133)
16 2eqm_A PHD finger protein 20-l 98.3 9.6E-08 3.3E-12 69.4 0.8 27 1-27 50-79 (88)
17 3sd4_A PHD finger protein 20; 97.8 2.8E-06 9.6E-11 58.7 0.4 18 1-18 43-61 (69)
18 1wjq_A KIAA1798 protein; MBT d 91.4 0.054 1.9E-06 40.3 1.0 21 2-22 45-68 (107)
19 3mts_A Histone-lysine N-methyl 76.4 1.8 6E-05 28.8 2.7 21 1-21 18-39 (64)
20 2r58_A Polycomb protein SCM; M 71.4 1.1 3.8E-05 38.1 0.8 20 2-21 175-197 (265)
21 1wjr_A KIAA1617 protein; MBT d 63.5 2.4 8.3E-05 32.0 1.2 17 2-18 43-62 (127)
22 2kvm_A Chromobox protein homol 57.8 8.2 0.00028 26.1 3.0 21 1-21 31-52 (74)
23 1ap0_A Modifier protein 1; chr 55.3 4.2 0.00014 27.5 1.2 20 1-20 31-51 (73)
24 1pfb_A Polycomb protein; chrom 55.1 3.2 0.00011 26.5 0.5 21 1-21 21-42 (55)
25 3h91_A Chromobox protein homol 55.1 3.4 0.00012 26.3 0.6 21 1-21 21-42 (54)
26 2biv_A SCML2 protein, sex COMB 54.7 3.8 0.00013 34.3 1.0 17 2-18 94-111 (243)
27 3i91_A Chromobox protein homol 54.2 3.6 0.00012 26.1 0.6 21 1-21 21-42 (54)
28 2dnv_A Chromobox protein homol 53.9 4.6 0.00016 26.6 1.2 21 1-21 28-49 (64)
29 1oz2_A Lethal(3)malignant brai 53.5 3.4 0.00012 36.0 0.6 18 1-18 179-197 (331)
30 1g6z_A CLR4 protein; transfera 50.0 5.4 0.00018 26.7 1.0 21 1-21 28-49 (70)
31 2d9u_A Chromobox protein homol 49.9 5.4 0.00019 27.0 1.0 22 1-22 28-50 (74)
32 2rsn_A Chromo domain-containin 47.6 4.9 0.00017 27.4 0.5 21 1-21 40-61 (75)
33 2k1b_A Chromobox protein homol 46.7 5.6 0.00019 27.1 0.7 21 1-21 39-60 (73)
34 3f2u_A Chromobox protein homol 46.5 5.2 0.00018 25.4 0.5 20 1-20 20-40 (55)
35 2r58_A Polycomb protein SCM; M 45.9 6.2 0.00021 33.4 1.0 18 1-18 65-83 (265)
36 3g7l_A Chromo domain-containin 44.2 6 0.00021 25.8 0.5 20 1-20 26-46 (61)
37 1pdq_A Polycomb protein; methy 43.0 6.3 0.00022 26.8 0.5 21 1-21 38-59 (72)
38 1q3l_A Heterochromatin protein 42.2 6.5 0.00022 26.5 0.4 20 1-20 34-54 (69)
39 3fdt_A Chromobox protein homol 41.6 6.7 0.00023 25.3 0.4 20 1-20 21-41 (59)
40 3lwe_A M-phase phosphoprotein 41.5 5.9 0.0002 25.8 0.1 20 1-20 22-42 (62)
41 2rso_A Chromatin-associated pr 40.2 10 0.00034 26.9 1.2 20 1-20 50-71 (92)
42 4hae_A CDY-like 2, chromodomai 38.6 7.8 0.00027 26.8 0.4 21 1-21 42-63 (81)
43 1h3z_A Hypothetical 62.8 kDa p 34.7 32 0.0011 24.6 3.2 26 1-28 49-75 (109)
44 2dnt_A Chromodomain protein, Y 33.9 10 0.00035 25.8 0.4 22 1-22 32-54 (78)
45 1use_A VAsp, vasodilator-stimu 30.2 91 0.0031 19.3 4.3 16 120-135 27-42 (45)
46 2b2y_A CHD-1, chromodomain-hel 29.5 17 0.00057 29.0 1.0 22 1-22 60-82 (187)
47 3nrw_A Phage integrase/site-sp 28.7 1.4E+02 0.0048 20.3 10.7 18 91-108 4-21 (117)
48 1ri0_A Hepatoma-derived growth 26.0 16 0.00055 26.5 0.3 23 1-25 55-78 (110)
49 3ut1_A Lethal(3)malignant brai 25.6 18 0.00061 31.4 0.6 18 1-18 174-192 (324)
50 2l89_A PWWP domain-containing 20.3 31 0.0011 24.8 0.9 26 1-28 46-72 (108)
No 1
>2f5j_A Mortality factor 4-like protein 1; MRG fold, mainly A-helix, gene regulation; 2.20A {Homo sapiens} PDB: 2aql_A 2lkm_B
Probab=100.00 E-value=9.2e-48 Score=316.09 Aligned_cols=135 Identities=53% Similarity=0.896 Sum_probs=124.0
Q ss_pred ccc--hhhhHHHHHHHhhcCCceeeCCCCCCHHHHHHHHHHhhhhccCCccchhhhHHHHHHHHHHHHhhhhcccCCChH
Q psy15819 67 KIC--SRTWLVDDWDTINNKNKLHQIPAKTSVDEIFESYLKHKANSKQMSGAKGKTVTEMVAGLKEYFNVMLGSQLLYQA 144 (203)
Q Consensus 67 ~iP--Lk~~LvdD~e~i~k~~~l~~LP~~~~V~~Il~~y~~~~~~~~~~s~~~~~~~~e~~~Gl~~yFn~~L~~~LLY~~ 144 (203)
+|| ||.+|||||++||++++|++|||++||++||++|.++... ++.++....+++|+++||++|||++||++|||++
T Consensus 9 ~iP~~Lk~~LvdDw~~Itk~~~L~~LP~~~~V~~IL~~Y~~~~~~-~~~~~~~~~~~~Ev~~Gl~~YFd~~L~~~LLY~~ 87 (181)
T 2f5j_A 9 KIPEELKPWLVDDWDLITRQKQLFYLPAKKNVDSILEDYANYKKS-RGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKF 87 (181)
T ss_dssp CCCGGGHHHHHHHHHHHHTSCEEECSSCSSBHHHHHHHHHHHHHC---------CHHHHHHHHHHHHHHHHHHHHSCCGG
T ss_pred eCCHHHHHHHHHHHHHHHhCCCeeeCCCCCcHHHHHHHHHHhhcc-cCCchhHHHHHHHHHHHHHHHHHHHcccccCcHH
Confidence 789 9999999999999999999999999999999999999876 3333334468999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCccccChHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhc
Q psy15819 145 ERRQYSQVMQKYQGAPLSSLYGASHLLRLFVRIGSVLAYTGLTERNIQLLQNAFQDFL 202 (203)
Q Consensus 145 Er~Qy~~~~~~~p~~~~s~~YG~~HLLRL~v~LP~ll~~t~~d~~s~~~l~~~~~dfl 202 (203)
||+||.++++++|+++||++||++|||||||+||++|+.|+||+++++.|+.++++||
T Consensus 88 ER~Qy~~ll~~~p~~~~S~iYGa~HLLRLfvkLPell~~t~~d~~s~~~L~~~l~~fl 145 (181)
T 2f5j_A 88 ERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLNYLHDFL 145 (181)
T ss_dssp GHHHHHHHHHHSTTCCHHHHCBHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCHHHHcCHHHHHHHHHHhHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999997
No 2
>2y0n_A MALE-specific lethal 3 homolog; transcription, chromatin, X chromosome, MSL complex; 3.00A {Homo sapiens}
Probab=100.00 E-value=8.5e-46 Score=310.85 Aligned_cols=136 Identities=37% Similarity=0.545 Sum_probs=122.0
Q ss_pred ccc--hhhhHHHHHHHhhcCCceeeCCCCCCHHHHHHHHHHhhhhccC-----------Cc------------cchhhhH
Q psy15819 67 KIC--SRTWLVDDWDTINNKNKLHQIPAKTSVDEIFESYLKHKANSKQ-----------MS------------GAKGKTV 121 (203)
Q Consensus 67 ~iP--Lk~~LvdD~e~i~k~~~l~~LP~~~~V~~Il~~y~~~~~~~~~-----------~s------------~~~~~~~ 121 (203)
+|| ||.+|||||++||++++|++|||++||++||++|+++...... .+ +.+.+++
T Consensus 11 ~iP~~Lk~~LvdDw~~Itk~~kLv~LPa~~~V~~IL~~Y~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (211)
T 2y0n_A 11 EIPEVLKKQLEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAFSANERPRHHHVMPHANMNVHYIPAEKNVDLC 90 (211)
T ss_dssp CCCHHHHHHHHHHHHHHHTSCCEECSSCSSCHHHHHHHHHHHHHHHHHSCC---------------------CTTCHHHH
T ss_pred eCCHHHHHHHHHHHHHHhcCCceEeCCCCCcHHHHHHHHHHHhhhccccccccccccccccccccccccccchhhHHHHH
Confidence 889 9999999999999999999999999999999999998763110 00 1134579
Q ss_pred HHHHHHHHHHHhhhhcccCCChHHHHHHHHHHHhc----------CCCCCccccChHHHHHHHHHHHHHHhcCCCCHHHH
Q psy15819 122 TEMVAGLKEYFNVMLGSQLLYQAERRQYSQVMQKY----------QGAPLSSLYGASHLLRLFVRIGSVLAYTGLTERNI 191 (203)
Q Consensus 122 ~e~~~Gl~~yFn~~L~~~LLY~~Er~Qy~~~~~~~----------p~~~~s~~YG~~HLLRL~v~LP~ll~~t~~d~~s~ 191 (203)
+|+++||+.|||++||++|||++||+||.++++.+ ++++||++||++|||||||+||+||+.|+||++++
T Consensus 91 ~Ev~~GLr~YFd~~L~~~LLY~~ER~Qy~~~~~~~~~~~~~~~~~~~~~~S~iYGa~HLLRLfvkLPelL~~t~~d~~s~ 170 (211)
T 2y0n_A 91 KEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSKYDIPPTTEFDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNL 170 (211)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCGGGHHHHHHHHHC--------CCSCCCCGGGTCCHHHHHHHHHHHHHHHHHSCCCHHHH
T ss_pred HHHHHHHHHHHHHHcccccCcHHHHHHHHHHHHhhcccCCcccccCCCCHHHHcCHHHHHHHHHHhHHHHhcCCCCHHHH
Confidence 99999999999999999999999999999998653 57899999999999999999999999999999999
Q ss_pred HHHHHHHhhhc
Q psy15819 192 QLLQNAFQDFL 202 (203)
Q Consensus 192 ~~l~~~~~dfl 202 (203)
+.|+.++++||
T Consensus 171 ~~L~~~l~~fl 181 (211)
T 2y0n_A 171 KALLKHFDLFL 181 (211)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999997
No 3
>3oa6_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3ob9_A*
Probab=99.83 E-value=8.3e-22 Score=149.04 Aligned_cols=43 Identities=28% Similarity=0.627 Sum_probs=38.4
Q ss_pred Ceeec-cCCCCcccccccccccccChhhHHHHHHHHHHhHhhhh
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVLKFNESNVQRQKDLKKSQQESDQ 43 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~rilk~~~eN~~~q~~l~~~~~~~~~ 43 (203)
||||| |||++|||||++||||++||||+++|++|++++.+..+
T Consensus 61 Y~VHY~GWn~~WDEWV~~drllk~neeN~~~qk~L~~~~~~~~~ 104 (110)
T 3oa6_A 61 YLIHFNGWNRSWDRWAAEDHVLRDTDENRRLQRKLARKAVARLR 104 (110)
T ss_dssp EEEEETTSCGGGCEEEEGGGEEECCHHHHHHHHHHHHHHHC---
T ss_pred EEEEECCcCcchhhccChhhhhcCCHHHHHHHHHHHHHHHHHhc
Confidence 89999 99999999999999999999999999999988765433
No 4
>3m9q_A Protein MALE-specific lethal-3; chromodomain, MSL3, methyllysine recognition, aromatic CAGE, complex, transcription upregulation; 1.29A {Drosophila melanogaster} SCOP: b.34.13.0
Probab=99.81 E-value=6.2e-21 Score=142.48 Aligned_cols=39 Identities=28% Similarity=0.440 Sum_probs=37.7
Q ss_pred Ceeec-cCCCCcccccccccccccChhhHHHHHHHHHHhH
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVLKFNESNVQRQKDLKKSQQ 39 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~rilk~~~eN~~~q~~l~~~~~ 39 (203)
||||| |||++||||||+|||+|+|+||+++|++|+++++
T Consensus 61 Y~VHY~GWn~rwDEWV~edRilk~~eeN~~~q~~L~~~~~ 100 (101)
T 3m9q_A 61 YKIHFQGWRPSYDRAVRATVLLKDTEENRQLQRELAEAAK 100 (101)
T ss_dssp EEEEETTSCGGGCEEECGGGEEECCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCcCceeecCHHHcccCCHHHHHHHHHHHHHcc
Confidence 89999 9999999999999999999999999999999875
No 5
>3m9p_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3oa6_A* 3ob9_A*
Probab=99.78 E-value=2.4e-20 Score=140.89 Aligned_cols=40 Identities=30% Similarity=0.696 Sum_probs=38.7
Q ss_pred Ceeec-cCCCCcccccccccccccChhhHHHHHHHHHHhHh
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVLKFNESNVQRQKDLKKSQQE 40 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~rilk~~~eN~~~q~~l~~~~~~ 40 (203)
|+||| |||++||||||+|||+++|+||+++|++|++++.+
T Consensus 61 Y~VHY~GWn~~wDEWV~e~rllk~~eeN~~~q~~L~~~a~~ 101 (110)
T 3m9p_A 61 YLIHFNGWNRSWDRWAAEDHVLRDTDENRRLQRKLARKAVA 101 (110)
T ss_dssp EEEEETTSCGGGCEEEEGGGEEECCHHHHHHHHHHHHHHHC
T ss_pred EEEEECCCCcchhhccCHhhhhcCCHHHHHHHHHHHHHHHH
Confidence 89999 99999999999999999999999999999999875
No 6
>3e9g_A Chromatin modification-related protein EAF3; chromatin remodeling, chromo domain, transcription factor, transcription regulation; 2.50A {Saccharomyces cerevisiae} PDB: 2k3x_A 3e9f_A*
Probab=99.77 E-value=9.3e-20 Score=140.59 Aligned_cols=42 Identities=38% Similarity=0.786 Sum_probs=39.4
Q ss_pred Ceeec-cCCCCcccccccccccccChhhHHHHHHHHHHhHhhh
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVLKFNESNVQRQKDLKKSQQESD 42 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~rilk~~~eN~~~q~~l~~~~~~~~ 42 (203)
||||| |||++|||||+++||||+|+||+++|++|++++...+
T Consensus 77 Y~VHY~GWn~~WDEWV~e~rvlk~~eeN~~lqk~L~~~a~~~~ 119 (130)
T 3e9g_A 77 FFIHYQGWKSSWDEWVGYDRIRAYNEENIAMKKRLANEAKEAK 119 (130)
T ss_dssp EEEEETTSCGGGCEEEETTTEECSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCChhhccCHhhhhccCHHHHHHHHHHHHHHHHHH
Confidence 89999 9999999999999999999999999999999887543
No 7
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A
Probab=99.76 E-value=1.5e-19 Score=135.32 Aligned_cols=41 Identities=51% Similarity=1.116 Sum_probs=39.3
Q ss_pred Ceeec-cCCCCcccccccccccccChhhHHHHHHHHHHhHhh
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVLKFNESNVQRQKDLKKSQQES 41 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~rilk~~~eN~~~q~~l~~~~~~~ 41 (203)
|+||| |||++|||||++|||+++|+||+++|++|+++++++
T Consensus 54 Y~VHY~GwNkR~DEWV~~~Rl~k~t~en~~~q~~L~~~~~~~ 95 (102)
T 2f5k_A 54 YFIHYSGWNKNWDEWVPESRVLKYVDTNLQKQRELQKANQEQ 95 (102)
T ss_dssp EEEEETTSCGGGCEEEEGGGEEESSHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCcCCCceeeccHhhcccCCHHHHHHHHHHHHHHHhh
Confidence 89999 999999999999999999999999999999998865
No 8
>2lrq_A Protein MRG15, NUA4 complex subunit EAF3 homolog; epigenetics, LID complex, transcription; NMR {Drosophila melanogaster}
Probab=99.61 E-value=6.3e-20 Score=133.39 Aligned_cols=39 Identities=49% Similarity=1.061 Sum_probs=37.7
Q ss_pred Ceeec-cCCCCcccccccccccccChhhHHHHHHHHHHhH
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVLKFNESNVQRQKDLKKSQQ 39 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~rilk~~~eN~~~q~~l~~~~~ 39 (203)
|+||| |||++|||||++|||+|+|+||+++|++|+++++
T Consensus 44 YyVHY~GwNkR~DEWV~~~Rl~k~t~en~~~q~~l~~~~~ 83 (85)
T 2lrq_A 44 YYIHYAGWSKNWDEWVPENRVLKYNDDNVKRRQELARQCG 83 (85)
Confidence 89999 9999999999999999999999999999998876
No 9
>2k3y_A Chromatin modification-related protein EAF3; dimethylated histone H3K36, EAF3-H3K36ME2 fusion, chromo barrel domain, histone deacetylase; HET: M2L; NMR {Saccharomyces cerevisiae}
Probab=99.75 E-value=1.6e-19 Score=141.25 Aligned_cols=41 Identities=37% Similarity=0.757 Sum_probs=38.6
Q ss_pred Ceeec-cCCCCcccccccccccccChhhHHHHHHHHHHhHhh
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVLKFNESNVQRQKDLKKSQQES 41 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~rilk~~~eN~~~q~~l~~~~~~~ 41 (203)
||||| |||++|||||++|||+++|+||+++|++|++++.++
T Consensus 79 Y~VHY~GWn~rwDEWV~~dRil~~~eeN~~~qKeL~~kak~~ 120 (136)
T 2k3y_A 79 FFIHYQGWKSSWDEWVGYDRIRAYNEENIAMKKRLANEAGST 120 (136)
T ss_dssp EEECCTTSCGGGCEEEETTTEEESCHHHHHHHHHHHHHSCSC
T ss_pred EEEEeCCcCCcceeeecHhhhhhCCHhHhHHHHHHHHHHHhh
Confidence 89999 999999999999999999999999999999888743
No 10
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=99.42 E-value=1.5e-14 Score=102.90 Aligned_cols=29 Identities=28% Similarity=0.700 Sum_probs=27.8
Q ss_pred Ceeec-cCCCCcccccccccccccChhhHH
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVLKFNESNVQ 29 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~rilk~~~eN~~ 29 (203)
|+||| |||++|||||+++||++++++|++
T Consensus 41 Y~VHY~gwnkr~DEWV~~~ri~~~~~~~~~ 70 (76)
T 2lcc_A 41 YLVHYYGWNVRYDEWVKADRIIWPLDKGLE 70 (76)
T ss_dssp EEEEETTSCCSSCEEEEGGGEECSSCSSCC
T ss_pred EEEEeCCcCCCceEecChhhccccccchhh
Confidence 89999 999999999999999999999975
No 11
>2bud_A Males-absent on the first protein; transferase, MOF, HAT, acetyl-transfer, dosage compensation complex, DCC, royal family; NMR {Drosophila melanogaster} SCOP: b.34.13.3
Probab=99.25 E-value=8.7e-13 Score=96.59 Aligned_cols=26 Identities=27% Similarity=0.518 Sum_probs=24.7
Q ss_pred Ceeec-cCCCCcccccccccccccChh
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVLKFNES 26 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~rilk~~~e 26 (203)
||||| |||++|||||+++||++.+++
T Consensus 50 YYVHY~g~NkRlDEWV~~~RL~~~~~~ 76 (92)
T 2bud_A 50 YYVHYVGLNRRLDGWVGRHRISDNADD 76 (92)
T ss_dssp EEEECSSSCTTTCEEEETTTEESCHHH
T ss_pred EEEEeCCcccccccccCHHHhchhccc
Confidence 89999 999999999999999999865
No 12
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=99.06 E-value=2.4e-11 Score=89.19 Aligned_cols=21 Identities=29% Similarity=0.778 Sum_probs=20.0
Q ss_pred Ceeec-cCCCCccccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVL 21 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ril 21 (203)
|+||| |||++|||||+.+||.
T Consensus 55 YyVHY~g~NkRlDEWV~~~rl~ 76 (92)
T 2ro0_A 55 FYVHYVNYNKRLDEWITTDRIN 76 (92)
T ss_dssp EEEEETTSCTTSCEEEEGGGEE
T ss_pred EEEEeCCcCcccccccCHhHcc
Confidence 89999 9999999999999984
No 13
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.05 E-value=3.3e-11 Score=87.65 Aligned_cols=21 Identities=38% Similarity=0.776 Sum_probs=20.0
Q ss_pred Ceeec-cCCCCccccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVL 21 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ril 21 (203)
||||| |||++|||||+++||.
T Consensus 46 YyVHY~g~NkRlDEWV~~~rl~ 67 (87)
T 2eko_A 46 FYVHYIDFNRRLDEWVTHERLD 67 (87)
T ss_dssp EEEEECSSCSCCCEEECTTTBC
T ss_pred EEEEeCCCCcccccccCHhHcc
Confidence 89999 9999999999999984
No 14
>2rnz_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=99.04 E-value=3.4e-11 Score=88.65 Aligned_cols=21 Identities=29% Similarity=0.778 Sum_probs=20.0
Q ss_pred Ceeec-cCCCCccccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVL 21 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ril 21 (203)
|+||| |||++|||||+++||.
T Consensus 57 YYVHY~g~NkRlDEWV~~~RI~ 78 (94)
T 2rnz_A 57 FYVHYVNYNKRLDEWITTDRIN 78 (94)
T ss_dssp EEEECTTSCSTTCEEEETTTBC
T ss_pred EEEEeCCcCcccccccCHHHcc
Confidence 89999 9999999999999994
No 15
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=99.01 E-value=5.5e-11 Score=92.78 Aligned_cols=23 Identities=35% Similarity=0.681 Sum_probs=21.0
Q ss_pred Ceeec-cCCCCccccccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVLKF 23 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~rilk~ 23 (203)
||||| |||++|||||+++||.-.
T Consensus 47 YyVHY~gwNkR~DEWV~~~ri~~~ 70 (133)
T 1wgs_A 47 FYVHYVGFNRRLDEWVDKNRLALT 70 (133)
T ss_dssp EEEECTTTCSSCCEEECTTTSCCT
T ss_pred EEEeccCcCCCceeecChhhcccc
Confidence 89999 999999999999999633
No 16
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=98.32 E-value=9.6e-08 Score=69.39 Aligned_cols=27 Identities=26% Similarity=0.758 Sum_probs=22.7
Q ss_pred Ceeec-cCCCCcccccccc--cccccChhh
Q psy15819 1 MIGHY-KWKRKWDEWVPEC--RVLKFNESN 27 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~--rilk~~~eN 27 (203)
|+||| ||+++||+||+.| +|++..-.+
T Consensus 50 v~VHfdGW~~~yDeWv~~dS~~I~P~g~~~ 79 (88)
T 2eqm_A 50 MLVHFERWSHRYDEWIYWDSNRLRPLERPA 79 (88)
T ss_dssp EEEEESSSTTTEEEEEETTSCCEECCCCCC
T ss_pred EEEEECCCCCcccEEeeCCCCcEecccccc
Confidence 68999 9999999999987 888765433
No 17
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=97.84 E-value=2.8e-06 Score=58.68 Aligned_cols=18 Identities=28% Similarity=0.890 Sum_probs=16.5
Q ss_pred Ceeec-cCCCCcccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPEC 18 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ 18 (203)
++||| ||+++||+|++.+
T Consensus 43 ~~VhfdGw~~~~D~W~~~d 61 (69)
T 3sd4_A 43 VLIHFKRWNHRYDEWFCWD 61 (69)
T ss_dssp EEEEETTSCGGGCEEEETT
T ss_pred EEEEeCCCCCCCCEEEcCC
Confidence 48999 9999999999876
No 18
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=91.41 E-value=0.054 Score=40.27 Aligned_cols=21 Identities=19% Similarity=0.586 Sum_probs=17.5
Q ss_pred eeec-cCCCCcccccccc--cccc
Q psy15819 2 IGHY-KWKRKWDEWVPEC--RVLK 22 (203)
Q Consensus 2 ~vHy-GW~~~WDeWV~~~--rilk 22 (203)
+||| ||..++|.|+..| .|..
T Consensus 45 ~v~fDGw~~~~D~W~~~dSpdIhP 68 (107)
T 1wjq_A 45 KVHFDGWNNCYDYWIDADSPDIHP 68 (107)
T ss_dssp EEECSSSCGGGCEEECTTCSSCEE
T ss_pred EEEeCCCCCcCCEEEECCCCCccc
Confidence 7999 9999999999866 5543
No 19
>3mts_A Histone-lysine N-methyltransferase SUV39H1; histone methyltransferase, histone-lysine N-methyltransferas SUV39H1, histone H3, TRI-methylation; 2.20A {Homo sapiens}
Probab=76.43 E-value=1.8 Score=28.83 Aligned_cols=21 Identities=10% Similarity=0.322 Sum_probs=19.2
Q ss_pred Ceeec-cCCCCccccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVL 21 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ril 21 (203)
|+|+. ||...-+-|.|++.|.
T Consensus 18 YlVKWkGy~~~~~TWEp~~nl~ 39 (64)
T 3mts_A 18 YLVKWRGYPDSESTWEPRQNLK 39 (64)
T ss_dssp EEEEETTSCGGGCEEEEGGGCC
T ss_pred EEEEEecCCCcCCcEeEHHHCC
Confidence 79999 9999999999999883
No 20
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=71.37 E-value=1.1 Score=38.10 Aligned_cols=20 Identities=15% Similarity=0.542 Sum_probs=17.2
Q ss_pred eeec-cCCCCcccccccc--ccc
Q psy15819 2 IGHY-KWKRKWDEWVPEC--RVL 21 (203)
Q Consensus 2 ~vHy-GW~~~WDeWV~~~--ril 21 (203)
+||| ||....|.|+..+ +|.
T Consensus 175 ~v~fDGw~~~~D~W~~~~Sp~I~ 197 (265)
T 2r58_A 175 HVTFDGWRGAFDYWCNYRSRDIF 197 (265)
T ss_dssp EEEETTSCGGGCEEEETTCTTEE
T ss_pred EEEeCCCCCcCCEEEECCCCCee
Confidence 7999 9999999999876 454
No 21
>1wjr_A KIAA1617 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=63.49 E-value=2.4 Score=32.02 Aligned_cols=17 Identities=18% Similarity=0.380 Sum_probs=15.1
Q ss_pred eeec-cCCC--Ccccccccc
Q psy15819 2 IGHY-KWKR--KWDEWVPEC 18 (203)
Q Consensus 2 ~vHy-GW~~--~WDeWV~~~ 18 (203)
+||| ||.. +.|-|+..+
T Consensus 43 ~l~~dG~~~~~~~D~W~~~~ 62 (127)
T 1wjr_A 43 RLRYVGLEDTESYDQWLFYL 62 (127)
T ss_dssp EECBTTCSSCCSSCEEEETT
T ss_pred EEEecCCCCCCCCCEeEeCC
Confidence 6999 9999 899999754
No 22
>2kvm_A Chromobox protein homolog 7; histone modification, lysine methylation, chromobox, polycom chromatin-binding; HET: MLY; NMR {Mus musculus}
Probab=57.77 E-value=8.2 Score=26.07 Aligned_cols=21 Identities=29% Similarity=0.817 Sum_probs=19.1
Q ss_pred Ceeec-cCCCCccccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVL 21 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ril 21 (203)
|+|.. ||...-+.|.|++.|.
T Consensus 31 YlVKWkGy~~~~~TWEp~~~L~ 52 (74)
T 2kvm_A 31 YLVKWKGWPPKYSTWEPEEHIL 52 (74)
T ss_dssp EEEEETTSCGGGCEEEETTTCS
T ss_pred EEEEEcCCCCccCeEeeHHHCC
Confidence 79999 9999999999999875
No 23
>1ap0_A Modifier protein 1; chromatin-binding, protein interaction motif, alpha+beta; NMR {Mus musculus} SCOP: b.34.13.2 PDB: 1guw_A*
Probab=55.34 E-value=4.2 Score=27.52 Aligned_cols=20 Identities=15% Similarity=0.433 Sum_probs=18.6
Q ss_pred Ceeec-cCCCCcccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRV 20 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ri 20 (203)
|+|.. ||...-+-|.|++.|
T Consensus 31 YlVKWkGy~~~~~TWEp~~nL 51 (73)
T 1ap0_A 31 YLLKWKGFSDEDNTWEPEENL 51 (73)
T ss_dssp EEEEEESSSSCCCEEEETTTC
T ss_pred EEEEECCCCCccCcEeeHHHC
Confidence 79999 999999999999976
No 24
>1pfb_A Polycomb protein; chromatin, histone methylation, polycomb, chromodomain, peptide binding protein; HET: M3L; 1.40A {Drosophila melanogaster} SCOP: b.34.13.2
Probab=55.14 E-value=3.2 Score=26.46 Aligned_cols=21 Identities=24% Similarity=0.857 Sum_probs=19.1
Q ss_pred Ceeec-cCCCCccccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVL 21 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ril 21 (203)
|+|.. ||...-+.|.|++.|.
T Consensus 21 YlVKWkgy~~~~~TWEp~~~l~ 42 (55)
T 1pfb_A 21 YRVKWKGWNQRYNTWEPEVNIL 42 (55)
T ss_dssp EEEEETTSCGGGCEEEEGGGCC
T ss_pred EEEEEcCCCCccCcEeEHHHCC
Confidence 78999 9999999999999775
No 25
>3h91_A Chromobox protein homolog 2; human chromobox homolog 2, CBX2, structural genomics, structural genomics consortium, SGC, chromatin regulator, D binding, nucleus; HET: M3L; 1.50A {Homo sapiens} SCOP: b.34.13.2 PDB: 2k28_A 3i8z_A
Probab=55.14 E-value=3.4 Score=26.25 Aligned_cols=21 Identities=29% Similarity=0.789 Sum_probs=19.3
Q ss_pred Ceeec-cCCCCccccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVL 21 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ril 21 (203)
|+|+. ||...-+-|.|++.|.
T Consensus 21 YlVkWkGy~~~~~TWEp~~nl~ 42 (54)
T 3h91_A 21 YLVKWRGWSSKHNSWEPEENIL 42 (54)
T ss_dssp EEEEETTSCGGGCEEEEGGGBC
T ss_pred EEEEEeCCCCcCCCeecHhHCC
Confidence 78999 9999999999999876
No 26
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A
Probab=54.69 E-value=3.8 Score=34.28 Aligned_cols=17 Identities=12% Similarity=-0.097 Sum_probs=15.4
Q ss_pred eeec-cCCCCcccccccc
Q psy15819 2 IGHY-KWKRKWDEWVPEC 18 (203)
Q Consensus 2 ~vHy-GW~~~WDeWV~~~ 18 (203)
+||| ||.+++|-|+..+
T Consensus 94 ~l~~dG~d~~~DfW~~~~ 111 (243)
T 2biv_A 94 RLRLDGSDNRNDFWRLVD 111 (243)
T ss_dssp EEEETTSCSSSCEEEETT
T ss_pred EEEECCCCCCCCEeecCC
Confidence 7999 9999999999765
No 27
>3i91_A Chromobox protein homolog 8; chromobox homolog 8, CBX8, structural genomics structural genomics consortium, SGC, chromatin regulator, N phosphoprotein, repressor; HET: M3L; 1.55A {Homo sapiens} SCOP: b.34.13.2 PDB: 3gv6_A* 3i90_A*
Probab=54.16 E-value=3.6 Score=26.09 Aligned_cols=21 Identities=29% Similarity=0.862 Sum_probs=19.3
Q ss_pred Ceeec-cCCCCccccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVL 21 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ril 21 (203)
|+|+. ||...-+-|.|++.|.
T Consensus 21 YlVkWkGy~~~~~TWEp~~nl~ 42 (54)
T 3i91_A 21 YLVKWKGWSQKYSTWEPEENIL 42 (54)
T ss_dssp EEEEETTSCGGGCEEEEGGGBC
T ss_pred EEEEEeCCCcccCcccchhHCC
Confidence 79999 9999999999999876
No 28
>2dnv_A Chromobox protein homolog 8; chromo domain, histone H3 tail, choromatin organization modifier, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.34.13.2
Probab=53.89 E-value=4.6 Score=26.55 Aligned_cols=21 Identities=29% Similarity=0.862 Sum_probs=19.0
Q ss_pred Ceeec-cCCCCccccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVL 21 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ril 21 (203)
|+|+. ||...-+-|.|++.|.
T Consensus 28 YlVKWkGy~~~~~TWEp~~~l~ 49 (64)
T 2dnv_A 28 YLVKWKGWSQKYSTWEPEENIL 49 (64)
T ss_dssp EEECCSSCCCSSCCEEETTTCC
T ss_pred EEEEECCCCcccCCccCHhHCC
Confidence 79999 9999999999999765
No 29
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A*
Probab=53.48 E-value=3.4 Score=36.04 Aligned_cols=18 Identities=22% Similarity=0.865 Sum_probs=16.0
Q ss_pred Ceeec-cCCCCcccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPEC 18 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ 18 (203)
++||| ||...+|-|+..+
T Consensus 179 ~~v~~Dg~~~~~D~w~~~~ 197 (331)
T 1oz2_A 179 FLVHFDNWDDTYDYWCDPS 197 (331)
T ss_dssp EEEEETTSCGGGCEEECTT
T ss_pred EEEEeCCCCCccCEEEecC
Confidence 47999 9999999999865
No 30
>1g6z_A CLR4 protein; transferase; NMR {Schizosaccharomyces pombe} SCOP: b.34.13.2
Probab=50.04 E-value=5.4 Score=26.67 Aligned_cols=21 Identities=14% Similarity=0.363 Sum_probs=18.7
Q ss_pred Ceeec-cCCCCccccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVL 21 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ril 21 (203)
|+|+. ||...-+-|.|++.|.
T Consensus 28 YlVKWkGy~~~~~TWEp~enL~ 49 (70)
T 1g6z_A 28 YRIRWLNYSSRSDTWEPPENLS 49 (70)
T ss_dssp EEECCTTTTSSCCEEECGGGGS
T ss_pred EEEEECCCCCCCCceecHHHHh
Confidence 79999 9999999999998763
No 31
>2d9u_A Chromobox protein homolog 2 (isoform 2); chromobox homolog 2, chromo domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.93 E-value=5.4 Score=27.02 Aligned_cols=22 Identities=27% Similarity=0.761 Sum_probs=19.7
Q ss_pred Ceeec-cCCCCcccccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVLK 22 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~rilk 22 (203)
|+|.. ||...-+-|.|++.|..
T Consensus 28 YlVKWkGy~~~~~TWEp~~nl~~ 50 (74)
T 2d9u_A 28 YLVKWRGWSSKHNSWEPEENILD 50 (74)
T ss_dssp EEEEETTSCTTTCEEEEGGGCCC
T ss_pred EEEEECCCCCccCccccHHHCCC
Confidence 89999 99999999999998763
No 32
>2rsn_A Chromo domain-containing protein 1; chromodomain, protein-peptide complex, RNA-mediated gene SIL chromosomal protein, methylation; HET: M3L; NMR {Schizosaccharomyces pombe}
Probab=47.59 E-value=4.9 Score=27.43 Aligned_cols=21 Identities=14% Similarity=0.338 Sum_probs=18.9
Q ss_pred Ceeec-cCCCCccccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVL 21 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ril 21 (203)
|+|+. ||...-+-|.|++.|.
T Consensus 40 YlVkWkGy~~~~~TWEp~~nl~ 61 (75)
T 2rsn_A 40 YYIKWAGYDWYDNTWEPEQNLF 61 (75)
T ss_dssp EEEEEESSCGGGCEEEEGGGGT
T ss_pred EEEEECCCCCcCCeeecHHHcc
Confidence 89999 9999999999998764
No 33
>2k1b_A Chromobox protein homolog 7; alpha/beta protein, chromatin regulator, nucleus, repressor, transcription, transcription regulation; NMR {Homo sapiens} PDB: 2l12_A* 2l1b_A*
Probab=46.67 E-value=5.6 Score=27.10 Aligned_cols=21 Identities=29% Similarity=0.817 Sum_probs=19.0
Q ss_pred Ceeec-cCCCCccccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVL 21 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ril 21 (203)
|+|.. ||...-+-|.|++.|.
T Consensus 39 YlVKWkGy~~~~~TWEp~enL~ 60 (73)
T 2k1b_A 39 YLVKWKGWPPKYSTWEPEEHIL 60 (73)
T ss_dssp EEEECTTCCGGGCCEEETTSCS
T ss_pred EEEEECCCCcccCeecchHHCC
Confidence 79999 9999999999999765
No 34
>3f2u_A Chromobox protein homolog 1; human chromobox homolog 1, CBX1, structural genomics, struct genomics consortium, SGC, centromere, nucleus; 1.80A {Homo sapiens} PDB: 3tzd_A* 2l11_A* 3dm1_A*
Probab=46.47 E-value=5.2 Score=25.42 Aligned_cols=20 Identities=15% Similarity=0.433 Sum_probs=18.5
Q ss_pred Ceeec-cCCCCcccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRV 20 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ri 20 (203)
|+|+. ||...-+-|.|++.|
T Consensus 20 YlVkWkGy~~~~~TWEp~~nl 40 (55)
T 3f2u_A 20 YLLKWKGFSDEDNTWEPEENL 40 (55)
T ss_dssp EEEEETTSCGGGCEEEEGGGC
T ss_pred EEEEEEeCCCccCCeeEHHHC
Confidence 78999 999999999999987
No 35
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=45.90 E-value=6.2 Score=33.41 Aligned_cols=18 Identities=11% Similarity=-0.071 Sum_probs=15.8
Q ss_pred Ceeec-cCCCCcccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPEC 18 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ 18 (203)
++||| ||.+..|-|+..+
T Consensus 65 l~l~~DG~d~~~DfW~~~~ 83 (265)
T 2r58_A 65 LRLRLDGSDSQNDFWRLVD 83 (265)
T ss_dssp EEEEETTSCSSCCEEEETT
T ss_pred EEEEeCCCCCcCCEeEeCC
Confidence 47999 9999999999765
No 36
>3g7l_A Chromo domain-containing protein 1; chromodomain, protein-peptide complex, silencing, cell cycle, chromosome partition, DNA-binding, nucleus; HET: M3L; 2.20A {Schizosaccharomyces pombe}
Probab=44.20 E-value=6 Score=25.76 Aligned_cols=20 Identities=15% Similarity=0.322 Sum_probs=18.6
Q ss_pred Ceeec-cCCCCcccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRV 20 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ri 20 (203)
|+|+. ||...-+-|.|++.|
T Consensus 26 YlVkWkGy~~~~~TWEp~~nl 46 (61)
T 3g7l_A 26 YYIKWAGYDWYDNTWEPEQNL 46 (61)
T ss_dssp EEEEETTSCGGGCEEEEGGGG
T ss_pred EEEEEeCCCCcCCceeeHhHC
Confidence 79999 999999999999977
No 37
>1pdq_A Polycomb protein; methyllysine, chromodomain, polycomb, lysine methylation, trimethyllysine, cation-PI, chromo, structural protein; HET: M3L; 1.76A {Drosophila melanogaster} SCOP: b.34.13.2
Probab=42.96 E-value=6.3 Score=26.80 Aligned_cols=21 Identities=24% Similarity=0.857 Sum_probs=19.0
Q ss_pred Ceeec-cCCCCccccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVL 21 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ril 21 (203)
|+|.. ||...-+-|.|++.|.
T Consensus 38 YlVKWkGy~~~~nTWEP~enL~ 59 (72)
T 1pdq_A 38 YRVKWKGWNQRYNTWEPEVNIL 59 (72)
T ss_dssp EEEEETTSCGGGCEEEEGGGCC
T ss_pred EEEEECCCCCccCeecchHHCC
Confidence 79999 9999999999999764
No 38
>1q3l_A Heterochromatin protein 1; chromodomain, HP1, chromatin, methyllysine, monomethyllysine, structural protein; HET: MLZ; 1.64A {Drosophila melanogaster} SCOP: b.34.13.2 PDB: 1kne_A* 1kna_A*
Probab=42.19 E-value=6.5 Score=26.50 Aligned_cols=20 Identities=15% Similarity=0.400 Sum_probs=18.5
Q ss_pred Ceeec-cCCCCcccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRV 20 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ri 20 (203)
|+|.. ||...-+-|.|++.|
T Consensus 34 YlVKWkGy~~~~~TWEp~enL 54 (69)
T 1q3l_A 34 YYLKWKGYPETENTWEPENNL 54 (69)
T ss_dssp EEEEETTSCGGGCEEEEGGGE
T ss_pred EEEEEcCCCcccCCccchHHC
Confidence 79999 999999999999977
No 39
>3fdt_A Chromobox protein homolog 5; chromobox homolog5, CBX5, structural GENO structural genomics consortium, SGC, centromere, nucleus, phosphoprotein; HET: M3L; 2.00A {Homo sapiens}
Probab=41.55 E-value=6.7 Score=25.30 Aligned_cols=20 Identities=15% Similarity=0.521 Sum_probs=18.5
Q ss_pred Ceeec-cCCCCcccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRV 20 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ri 20 (203)
|+|+. ||...-+-|.|++.|
T Consensus 21 YlVkWkGy~~~~~TWEp~~nl 41 (59)
T 3fdt_A 21 YLLKWKGFSEEHNTWEPEKNL 41 (59)
T ss_dssp EEEEETTSCGGGCEEEEGGGE
T ss_pred EEEEEeCCCcccCCccchhHC
Confidence 78999 999999999999977
No 40
>3lwe_A M-phase phosphoprotein 8; MPP8, structural genomics, structural genomics consortium, S repeat, nucleus, cell cycle; 2.05A {Homo sapiens} SCOP: b.34.13.0 PDB: 3r93_A* 3svm_A* 3qo2_A*
Probab=41.46 E-value=5.9 Score=25.84 Aligned_cols=20 Identities=20% Similarity=0.446 Sum_probs=18.2
Q ss_pred Ceeec-cCCCCcccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRV 20 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ri 20 (203)
|+|+. ||...-+-|.|++.|
T Consensus 22 YlVkWkGy~~~~~TWEp~~nl 42 (62)
T 3lwe_A 22 YKVRWKGYTSDDDTWEPEIHL 42 (62)
T ss_dssp EEEEETTSCGGGCEEEEHHHH
T ss_pred EEEEEeCCCCcCCCeeeHhHh
Confidence 79999 999999999999876
No 41
>2rso_A Chromatin-associated protein SWI6; chromodomain, silencing, chromosomal protein, Met transcription; NMR {Schizosaccharomyces pombe}
Probab=40.16 E-value=10 Score=26.89 Aligned_cols=20 Identities=10% Similarity=0.343 Sum_probs=17.4
Q ss_pred Ceeec-cCCC-Ccccccccccc
Q psy15819 1 MIGHY-KWKR-KWDEWVPECRV 20 (203)
Q Consensus 1 ~~vHy-GW~~-~WDeWV~~~ri 20 (203)
|+|+. ||.. .++-|.|++.|
T Consensus 50 YlVkWkGy~~~~~~TWEP~~nl 71 (92)
T 2rso_A 50 YLLKWEGYDDPSDNTWSSEADC 71 (92)
T ss_dssp EEEEETTCCCCTTSEEECGGGG
T ss_pred EEEEEccCCCcccCccccHHHH
Confidence 89999 9984 78899999866
No 42
>4hae_A CDY-like 2, chromodomain Y-like protein 2; protein binding, structural genomics consortiu; 2.00A {Homo sapiens}
Probab=38.59 E-value=7.8 Score=26.83 Aligned_cols=21 Identities=24% Similarity=0.533 Sum_probs=18.5
Q ss_pred Ceeec-cCCCCccccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVL 21 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ril 21 (203)
|+|.. ||...-|-|.|++.|.
T Consensus 42 YlVKWkGy~~~~~TWEp~~nl~ 63 (81)
T 4hae_A 42 YLIRWKGYGSTEDTWEPEHHLL 63 (81)
T ss_dssp EEEEETTCCGGGCEEEEGGGEE
T ss_pred EEEEECCCCCCCCeEEeHHHhh
Confidence 89999 9999999999988663
No 43
>1h3z_A Hypothetical 62.8 kDa protein C215.07C; nuclear protein, PWWP, chromatin, beta-barrel; NMR {Schizosaccharomyces pombe} SCOP: b.34.9.2
Probab=34.69 E-value=32 Score=24.59 Aligned_cols=26 Identities=8% Similarity=0.173 Sum_probs=21.4
Q ss_pred Ceeec-cCCCCcccccccccccccChhhH
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVLKFNESNV 28 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~rilk~~~eN~ 28 (203)
|+|.| |=+ .| -||+.++|..+++++.
T Consensus 49 ~~V~FFg~~-~~-aWv~~~~l~p~~~~~~ 75 (109)
T 1h3z_A 49 YPVIFFPNK-EY-LWTGSDSLTPLTSEAI 75 (109)
T ss_dssp EEEEETTTT-CC-EEEEGGGEEECCHHHH
T ss_pred EEEEEcCCC-CE-EEECHHHeeeCCchHH
Confidence 67899 855 55 8999999999998764
No 44
>2dnt_A Chromodomain protein, Y chromosome-like, isoform B; histone H3 tail, choromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.13.2
Probab=33.91 E-value=10 Score=25.83 Aligned_cols=22 Identities=18% Similarity=0.516 Sum_probs=19.2
Q ss_pred Ceeec-cCCCCcccccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVLK 22 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~rilk 22 (203)
|+|+. ||...-+-|.|++.|..
T Consensus 32 YlVKWkGy~~~~~TWEp~~~l~~ 54 (78)
T 2dnt_A 32 YLVRWKGYDSEDDTWEPEQHLVN 54 (78)
T ss_dssp EEECBTTBCGGGCEEEETTTCTT
T ss_pred EEEEECCCCccCCceecHHHHHh
Confidence 79999 99998899999997753
No 45
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=30.22 E-value=91 Score=19.26 Aligned_cols=16 Identities=6% Similarity=0.129 Sum_probs=12.8
Q ss_pred hHHHHHHHHHHHHhhh
Q psy15819 120 TVTEMVAGLKEYFNVM 135 (203)
Q Consensus 120 ~~~e~~~Gl~~yFn~~ 135 (203)
.-.|++++|+..|++.
T Consensus 27 ~K~EIIeAi~~El~~~ 42 (45)
T 1use_A 27 VKEEIIEAFVQELRKR 42 (45)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhc
Confidence 3468999999999864
No 46
>2b2y_A CHD-1, chromodomain-helicase-DNA-binding protein 1; three stranded antiparallel beta sheet, alpha helix linker, peptide binding protein; 2.35A {Homo sapiens} SCOP: b.34.13.2 b.34.13.2 PDB: 2b2u_A* 2b2v_A* 2b2w_A 2b2t_A*
Probab=29.54 E-value=17 Score=29.01 Aligned_cols=22 Identities=14% Similarity=0.453 Sum_probs=19.8
Q ss_pred Ceeec-cCCCCcccccccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVLK 22 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~rilk 22 (203)
|||.+ ||+...+.|+|++.|..
T Consensus 60 YlVKWkg~s~~h~tWe~~~~L~~ 82 (187)
T 2b2y_A 60 YLIKWKGWSHIHNTWETEETLKQ 82 (187)
T ss_dssp EEEEETTSCGGGCEEECHHHHHH
T ss_pred EEEEECCCCcccCeeCCHHHhCc
Confidence 89999 99999999999987754
No 47
>3nrw_A Phage integrase/site-specific recombinase; alpha-helical domain, structural genomics, PSI-2, protein ST initiative; 1.70A {Haloarcula marismortui}
Probab=28.66 E-value=1.4e+02 Score=20.34 Aligned_cols=18 Identities=28% Similarity=0.377 Sum_probs=16.3
Q ss_pred CCCCCHHHHHHHHHHhhh
Q psy15819 91 PAKTSVDEIFESYLKHKA 108 (203)
Q Consensus 91 P~~~~V~~Il~~y~~~~~ 108 (203)
|..+|+.+.+++|+++..
T Consensus 4 ~~~~t~~~~~~~fl~~l~ 21 (117)
T 3nrw_A 4 RPSLSPREARDRYLAHRQ 21 (117)
T ss_dssp CCCCCHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHH
Confidence 778999999999999876
No 48
>1ri0_A Hepatoma-derived growth factor; HDGF, HATH domain, PWWP domain, heparin-binding, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.9.2 PDB: 2b8a_A 2nlu_A
Probab=26.01 E-value=16 Score=26.52 Aligned_cols=23 Identities=4% Similarity=0.082 Sum_probs=19.2
Q ss_pred Ceeec-cCCCCcccccccccccccCh
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVLKFNE 25 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~rilk~~~ 25 (203)
|.|.| |=+.+. ||+.++|..+.+
T Consensus 55 ~~V~FFGt~~~a--wv~~~~l~pf~~ 78 (110)
T 1ri0_A 55 YQVFFFGTHETA--FLGPKDLFPYEE 78 (110)
T ss_dssp EEEEETTTTEEE--EECSTTEECHHH
T ss_pred EEEEEecCCCEE--EECHHHccchhh
Confidence 67899 977665 999999999974
No 49
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A
Probab=25.60 E-value=18 Score=31.35 Aligned_cols=18 Identities=22% Similarity=0.890 Sum_probs=15.8
Q ss_pred Ceeec-cCCCCcccccccc
Q psy15819 1 MIGHY-KWKRKWDEWVPEC 18 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~ 18 (203)
++||| ||....|-|+..+
T Consensus 174 l~v~~Dg~~~~~d~w~~~~ 192 (324)
T 3ut1_A 174 FLVHFDNWDESYDYWCEAS 192 (324)
T ss_dssp EEEEETTSCGGGCEEECTT
T ss_pred EEEEECCCCCcCCEEEECC
Confidence 36999 9999999999766
No 50
>2l89_A PWWP domain-containing protein 1; histone binding, protein binding; NMR {Schizosaccharomyces pombe}
Probab=20.33 E-value=31 Score=24.78 Aligned_cols=26 Identities=15% Similarity=0.293 Sum_probs=20.2
Q ss_pred Ceeec-cCCCCcccccccccccccChhhH
Q psy15819 1 MIGHY-KWKRKWDEWVPECRVLKFNESNV 28 (203)
Q Consensus 1 ~~vHy-GW~~~WDeWV~~~rilk~~~eN~ 28 (203)
|.|.| | ...| -||+..+|..++++..
T Consensus 46 ~~V~FFg-~~~~-aWv~~~~l~p~~~~~~ 72 (108)
T 2l89_A 46 YKVLFFP-DFNF-AWVKRNSVKPLLDSEI 72 (108)
T ss_dssp EEEEETT-TTEE-EEECGGGEEECCHHHH
T ss_pred EEEEECC-CCCE-EEEchhhceeCCHHHH
Confidence 67899 8 3333 7999999999997644
Done!