BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1582
(129 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q21944|GLPK_CAEEL Probable glycerol kinase OS=Caenorhabditis elegans GN=R11F4.1 PE=3
SV=1
Length = 502
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 61/91 (67%)
Query: 24 TSRVLIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLS 83
+SR L+ A T E V SH +++ + P GW E DPME+ V + + + IEKL G+S
Sbjct: 13 SSRFLVFEADTGELVTSHQIEVRQLFPHGGWVEMDPMELYDTVVSCISKTIEKLENLGIS 72
Query: 84 RDDIVTLGITNQRETTVVWDLNTGEPLYNAI 114
D+I ++G+ NQRET++VWD TG+PLYNAI
Sbjct: 73 ADEIKSVGVANQRETSIVWDKETGKPLYNAI 103
>sp|Q4R4D5|GLPK2_MACFA Glycerol kinase 2 OS=Macaca fascicularis GN=GK2 PE=2 SV=1
Length = 553
Score = 94.7 bits (234), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/114 (42%), Positives = 69/114 (60%), Gaps = 2/114 (1%)
Query: 1 MHDNRPQAVAPTQIRDRLSATYHTSRVLIISALTQEEVVSHSMDISTISPQEGWAEQDPM 60
M D + AV P + + ++R L+ S+ T E + H ++++ P+EGW EQDP
Sbjct: 1 MADPKTAAVGP--LVGAVVQGTDSTRFLVFSSKTAELLSHHKVELTQEFPKEGWVEQDPK 58
Query: 61 EILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEPLYNAI 114
EILQ+V + R EKL + +I +GI+NQRETTV+WD TGEPLYNA+
Sbjct: 59 EILQSVYECIARTCEKLDEMNIDISNIKAVGISNQRETTVIWDKLTGEPLYNAV 112
>sp|Q9WU65|GLPK2_MOUSE Glycerol kinase 2 OS=Mus musculus GN=Gk2 PE=2 SV=1
Length = 554
Score = 94.7 bits (234), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/92 (45%), Positives = 65/92 (70%)
Query: 23 HTSRVLIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGL 82
+++R L+ ++ T E V SH ++++ P+EGW EQDP EIL++V + +A EKL+ +
Sbjct: 21 NSTRFLVFNSKTAELVCSHQVELTQEYPKEGWVEQDPKEILKSVYECIAKACEKLAEVNI 80
Query: 83 SRDDIVTLGITNQRETTVVWDLNTGEPLYNAI 114
+I +G++NQRETTVVWD TG+PLYNA+
Sbjct: 81 DISNIKAIGVSNQRETTVVWDKFTGDPLYNAV 112
>sp|Q64516|GLPK_MOUSE Glycerol kinase OS=Mus musculus GN=Gk PE=2 SV=2
Length = 559
Score = 93.2 bits (230), Expect = 4e-19, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 61/91 (67%)
Query: 24 TSRVLIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLS 83
++R L+ ++ T E + H ++I P+EGW EQDP EILQ+V +++ EKL +
Sbjct: 22 STRFLVFNSKTAELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEKTCEKLGQLNID 81
Query: 84 RDDIVTLGITNQRETTVVWDLNTGEPLYNAI 114
+I +G++NQRETTVVWD TGEPLYNA+
Sbjct: 82 ISNIKAIGVSNQRETTVVWDKVTGEPLYNAV 112
>sp|Q0IID9|GLPK_BOVIN Glycerol kinase OS=Bos taurus GN=GK PE=2 SV=1
Length = 559
Score = 92.8 bits (229), Expect = 5e-19, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 61/91 (67%)
Query: 24 TSRVLIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLS 83
++R L+ ++ T E + H ++I P+EGW EQDP EILQ+V +++ EKL +
Sbjct: 22 STRFLVFNSKTAELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEKTCEKLGQLNID 81
Query: 84 RDDIVTLGITNQRETTVVWDLNTGEPLYNAI 114
+I +G++NQRETTVVWD TGEPLYNA+
Sbjct: 82 ISNIKAIGVSNQRETTVVWDKLTGEPLYNAV 112
>sp|Q63060|GLPK_RAT Glycerol kinase OS=Rattus norvegicus GN=Gk PE=2 SV=1
Length = 524
Score = 92.4 bits (228), Expect = 7e-19, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 61/91 (67%)
Query: 24 TSRVLIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLS 83
++R L+ ++ T E + H ++I P+EGW EQDP EILQ+V +++ EKL +
Sbjct: 22 STRFLVFNSKTAELLSHHQVEIKQEFPREGWVEQDPKEILQSVYECIEKTCEKLGQLNID 81
Query: 84 RDDIVTLGITNQRETTVVWDLNTGEPLYNAI 114
+I +G++NQRETTVVWD TGEPLYNA+
Sbjct: 82 ISNIKAIGVSNQRETTVVWDKLTGEPLYNAV 112
>sp|Q14410|GLPK2_HUMAN Glycerol kinase 2 OS=Homo sapiens GN=GK2 PE=2 SV=2
Length = 553
Score = 92.0 bits (227), Expect = 8e-19, Method: Composition-based stats.
Identities = 41/92 (44%), Positives = 62/92 (67%)
Query: 23 HTSRVLIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGL 82
+++R L+ ++ T E + H ++++ P+EGW EQDP EILQ+V + R EKL +
Sbjct: 21 NSTRFLVFNSKTAELLSHHKVELTQEFPKEGWVEQDPKEILQSVYECIARTCEKLDELNI 80
Query: 83 SRDDIVTLGITNQRETTVVWDLNTGEPLYNAI 114
+I +G++NQRETTV+WD TGEPLYNA+
Sbjct: 81 DISNIKAVGVSNQRETTVIWDKLTGEPLYNAV 112
>sp|Q14409|GLPK3_HUMAN Putative glycerol kinase 3 OS=Homo sapiens GN=GK3P PE=5 SV=2
Length = 553
Score = 91.3 bits (225), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 60/91 (65%)
Query: 24 TSRVLIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLS 83
++R L+ ++ T E + H ++I P+EGW EQDP EIL +V +++ EKL +
Sbjct: 22 STRFLVFNSRTAELLSHHQVEIKQEFPREGWVEQDPKEILHSVYECIEKTCEKLGQLNIG 81
Query: 84 RDDIVTLGITNQRETTVVWDLNTGEPLYNAI 114
+I +G++NQRETTVVWD TGEPLYNA+
Sbjct: 82 ISNIKAIGVSNQRETTVVWDKITGEPLYNAV 112
>sp|P32189|GLPK_HUMAN Glycerol kinase OS=Homo sapiens GN=GK PE=1 SV=3
Length = 559
Score = 90.9 bits (224), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 60/91 (65%)
Query: 24 TSRVLIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLS 83
++R L+ ++ T E + H ++I P+EGW EQDP EIL +V +++ EKL +
Sbjct: 22 STRFLVFNSKTAELLSHHQVEIKQEFPREGWVEQDPKEILHSVYECIEKTCEKLGQLNID 81
Query: 84 RDDIVTLGITNQRETTVVWDLNTGEPLYNAI 114
+I +G++NQRETTVVWD TGEPLYNA+
Sbjct: 82 ISNIKAIGVSNQRETTVVWDKITGEPLYNAV 112
>sp|Q8RHZ9|GLPK_FUSNN Glycerol kinase OS=Fusobacterium nucleatum subsp. nucleatum (strain
ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) GN=glpK
PE=3 SV=1
Length = 497
Score = 82.8 bits (203), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 24 TSRVLIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLS 83
TS I+ +Q + + + I P EGW E DPMEI + + I + G+S
Sbjct: 12 TSSRAILFDESQNIIGVAQKEFTQIYPNEGWVEHDPMEIWSSQSGVLSEVIARA---GIS 68
Query: 84 RDDIVTLGITNQRETTVVWDLNTGEPLYNAI 114
+ DI+ LGITNQRETT+VWD NTG+P+YNAI
Sbjct: 69 QHDIIALGITNQRETTIVWDKNTGKPVYNAI 99
>sp|B0K643|GLPK_THEPX Glycerol kinase OS=Thermoanaerobacter sp. (strain X514) GN=glpK
PE=3 SV=1
Length = 497
Score = 80.1 bits (196), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/91 (47%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 24 TSRVLIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLS 83
TS II + + V S + + I P+ GW E DPMEI IEK G++
Sbjct: 13 TSSRAIIFDHSGKIVASQNQEFKQIYPKAGWVEHDPMEIWGTQIGVAKGVIEKA---GIN 69
Query: 84 RDDIVTLGITNQRETTVVWDLNTGEPLYNAI 114
+DI +GITNQRETTVVWD NTG+P+YNAI
Sbjct: 70 PEDIAAIGITNQRETTVVWDKNTGKPIYNAI 100
>sp|Q4K734|GLPK_PSEF5 Glycerol kinase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC
BAA-477) GN=glpK PE=3 SV=1
Length = 501
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 50 PQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEP 109
PQ GW E DPMEI M +E L+ GL D + +GITNQRETTVVWD NTG P
Sbjct: 44 PQAGWVEHDPMEIFATQSAVM---VEALAQAGLHHDQVAAIGITNQRETTVVWDKNTGRP 100
Query: 110 LYNAI 114
+YNAI
Sbjct: 101 IYNAI 105
>sp|Q8R8J4|GLPK_THETN Glycerol kinase OS=Thermoanaerobacter tengcongensis (strain DSM
15242 / JCM 11007 / NBRC 100824 / MB4) GN=glpK PE=3 SV=1
Length = 497
Score = 79.7 bits (195), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 24 TSRVLIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLS 83
TS II + + + S + + I P+ GW E DPMEI ++ IEK G+
Sbjct: 13 TSSRAIIFDHSGKMIASLNKEFRQIYPKPGWVEHDPMEIWESQIEVAKGVIEKA---GIK 69
Query: 84 RDDIVTLGITNQRETTVVWDLNTGEPLYNAI 114
+DI +GITNQRETTVVWD NTG+P+YNAI
Sbjct: 70 PEDIAAIGITNQRETTVVWDKNTGKPIYNAI 100
>sp|Q9RJM2|GLPK2_STRCO Glycerol kinase 2 OS=Streptomyces coelicolor (strain ATCC BAA-471 /
A3(2) / M145) GN=glpK2 PE=3 SV=1
Length = 507
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 24 TSRVLIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLS 83
TS +I EV H ++ I P+ GW E DP+EI + + M A+ GLS
Sbjct: 13 TSTRFMIFDHGGNEVAKHQLEHEQILPRSGWVEHDPVEIWERTNSVMQNALRN---GGLS 69
Query: 84 RDDIVTLGITNQRETTVVWDLNTGEPLYNAI 114
D+ +GITNQRETTVVWD TG P YNAI
Sbjct: 70 GTDLAAIGITNQRETTVVWDPRTGRPYYNAI 100
>sp|A3QIN4|GLPK_SHELP Glycerol kinase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4)
GN=glpK PE=3 SV=1
Length = 498
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 50/71 (70%), Gaps = 3/71 (4%)
Query: 44 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWD 103
+ S I P+ GW E DPMEI + +T+ IE L+ G+ D++ ++GITNQRETTV+WD
Sbjct: 34 EFSQIYPKVGWVEHDPMEIWASQSSTL---IEALARAGIHSDEVASIGITNQRETTVLWD 90
Query: 104 LNTGEPLYNAI 114
TG+P+YNAI
Sbjct: 91 KATGKPIYNAI 101
>sp|B0K754|GLPK_THEP3 Glycerol kinase OS=Thermoanaerobacter pseudethanolicus (strain ATCC
33223 / 39E) GN=glpK PE=3 SV=1
Length = 497
Score = 78.2 bits (191), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 24 TSRVLIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLS 83
TS II + + + S + + I P+ GW E DPMEI IEK G++
Sbjct: 13 TSSRAIIFDRSGKIIASLNQEFKQIYPKAGWVEHDPMEIWGTQIGVAKGVIEKA---GIN 69
Query: 84 RDDIVTLGITNQRETTVVWDLNTGEPLYNAI 114
+DI +GITNQRETTVVWD NTG+P+YNAI
Sbjct: 70 PEDIAAIGITNQRETTVVWDKNTGKPIYNAI 100
>sp|O86033|GLPK_RHIME Glycerol kinase OS=Rhizobium meliloti (strain 1021) GN=glpK PE=1
SV=2
Length = 497
Score = 78.2 bits (191), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 10/85 (11%)
Query: 30 ISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVT 89
I+ + Q+E H P+ GW E DP EI Q V +T+ AIEK G++ +DI
Sbjct: 26 IAGVGQKEFKQHF-------PKSGWVEHDPEEIWQTVVSTVKEAIEK---SGITANDIAA 75
Query: 90 LGITNQRETTVVWDLNTGEPLYNAI 114
+GITNQRET VVWD TG+P++NAI
Sbjct: 76 IGITNQRETVVVWDRETGKPIHNAI 100
>sp|C3LW10|GLPK_VIBCM Glycerol kinase OS=Vibrio cholerae serotype O1 (strain M66-2)
GN=glpK PE=3 SV=1
Length = 505
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 44 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWD 103
+ + I PQ GW E DPMEI +T+ +E L G+ D++ +GITNQRETTVVW+
Sbjct: 35 EFTQIYPQAGWVEHDPMEIYATQSSTL---VEALGKAGIRSDEVAAIGITNQRETTVVWN 91
Query: 104 LNTGEPLYNAI 114
TG+P+YNAI
Sbjct: 92 KETGKPVYNAI 102
>sp|Q9KLJ9|GLPK_VIBCH Glycerol kinase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 /
El Tor Inaba N16961) GN=glpK PE=3 SV=1
Length = 505
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 44 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWD 103
+ + I PQ GW E DPMEI +T+ +E L G+ D++ +GITNQRETTVVW+
Sbjct: 35 EFTQIYPQAGWVEHDPMEIYATQSSTL---VEALGKAGIRSDEVAAIGITNQRETTVVWN 91
Query: 104 LNTGEPLYNAI 114
TG+P+YNAI
Sbjct: 92 KETGKPVYNAI 102
>sp|A5EZR2|GLPK_VIBC3 Glycerol kinase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 /
Ogawa 395 / O395) GN=glpK PE=3 SV=1
Length = 505
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 44 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWD 103
+ + I PQ GW E DPMEI +T+ +E L G+ D++ +GITNQRETTVVW+
Sbjct: 35 EFTQIYPQAGWVEHDPMEIYATQSSTL---VEALGKAGIRSDEVAAIGITNQRETTVVWN 91
Query: 104 LNTGEPLYNAI 114
TG+P+YNAI
Sbjct: 92 KETGKPVYNAI 102
>sp|B0KUG0|GLPK_PSEPG Glycerol kinase OS=Pseudomonas putida (strain GB-1) GN=glpK PE=3
SV=1
Length = 499
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 50 PQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEP 109
PQ GW E DPMEI TM +E L+ G+S + LGITNQRETTVVWD TG P
Sbjct: 44 PQAGWVEHDPMEIFATQSATM---VEALAQAGISHAQVAALGITNQRETTVVWDKETGRP 100
Query: 110 LYNAI 114
+YNAI
Sbjct: 101 VYNAI 105
>sp|A5VZG7|GLPK_PSEP1 Glycerol kinase OS=Pseudomonas putida (strain F1 / ATCC 700007)
GN=glpK PE=3 SV=1
Length = 499
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 50 PQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEP 109
PQ GW E DPMEI TM +E L+ G+S + LGITNQRETTVVWD TG P
Sbjct: 44 PQAGWVEHDPMEIFATQSATM---VEALAQAGISHAQVAALGITNQRETTVVWDKETGRP 100
Query: 110 LYNAI 114
+YNAI
Sbjct: 101 VYNAI 105
>sp|Q88NX8|GLPK_PSEPK Glycerol kinase OS=Pseudomonas putida (strain KT2440) GN=glpK PE=3
SV=1
Length = 499
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 50 PQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEP 109
PQ GW E DPMEI TM +E L+ G+S + LGITNQRETTVVWD TG P
Sbjct: 44 PQAGWVEHDPMEIFATQSATM---VEALAQAGISHAQVAALGITNQRETTVVWDKETGRP 100
Query: 110 LYNAI 114
+YNAI
Sbjct: 101 VYNAI 105
>sp|O66746|GLPK_AQUAE Glycerol kinase OS=Aquifex aeolicus (strain VF5) GN=glpK PE=3 SV=1
Length = 492
Score = 77.4 bits (189), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/101 (42%), Positives = 67/101 (66%), Gaps = 7/101 (6%)
Query: 24 TSRVLIISALTQEEVVSHS-MDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGL 82
T+RV +I+ ++V+ S ++S I P+ GW EQDP+E+ +AV+ ++ I+++ GL
Sbjct: 11 TTRVKVIAFSKNGKIVAISDREVSQIYPEPGWVEQDPLELWEAVRKSLSEVIQQV---GL 67
Query: 83 SRDDIVTLGITNQRETTVVWDLNTGEPLYNAI-EQGLRIVD 122
+I ++GITNQRET ++WD TG P+YNAI Q LR D
Sbjct: 68 K--EINSIGITNQRETVILWDKETGRPVYNAILWQDLRTED 106
>sp|Q826J2|GLPK3_STRAW Glycerol kinase 3 OS=Streptomyces avermitilis (strain ATCC 31267 /
DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 /
MA-4680) GN=glpK3 PE=3 SV=1
Length = 505
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 24 TSRVLIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHG-L 82
TS +I EV H ++ + I P+ GW E DP+EI + + + A+ HG L
Sbjct: 13 TSTRFMIFDHAGNEVAKHQLEHAQILPRSGWVEHDPVEIWERTNSVIQNALR----HGNL 68
Query: 83 SRDDIVTLGITNQRETTVVWDLNTGEPLYNAI 114
S DD+ +GITNQRETTVVWD G P YNAI
Sbjct: 69 SPDDLAAIGITNQRETTVVWDPRNGRPYYNAI 100
>sp|Q9ADA7|GLPK1_STRCO Glycerol kinase 1 OS=Streptomyces coelicolor (strain ATCC BAA-471 /
A3(2) / M145) GN=glpK1 PE=3 SV=1
Length = 512
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
Query: 48 ISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTG 107
I P+ GW E D EI VQ + A+EK G++RDDI +GITNQRETT+VWD NTG
Sbjct: 43 IFPKPGWVEHDATEIWTNVQEVVAGAVEK---AGITRDDIKAIGITNQRETTLVWDKNTG 99
Query: 108 EPLYNAI 114
EP++NAI
Sbjct: 100 EPVHNAI 106
>sp|Q3K7I5|GLPK_PSEPF Glycerol kinase OS=Pseudomonas fluorescens (strain Pf0-1) GN=glpK
PE=3 SV=1
Length = 500
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 50 PQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEP 109
PQ GW E DPMEI M +E L+ GL D + +GITNQRETTVVWD TG P
Sbjct: 44 PQAGWVEHDPMEIFATQSAVM---VEALAQAGLHHDQVAAIGITNQRETTVVWDKTTGRP 100
Query: 110 LYNAI 114
+YNAI
Sbjct: 101 VYNAI 105
>sp|Q7MI93|GLPK_VIBVY Glycerol kinase OS=Vibrio vulnificus (strain YJ016) GN=glpK PE=3
SV=1
Length = 505
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 44 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWD 103
+ + I PQ GW E DPMEI +T+ +E L G+ D + +GITNQRETT+VW+
Sbjct: 35 EFTQIYPQAGWVEHDPMEIYATQSSTL---VEALGKKGIRSDQVAAIGITNQRETTIVWN 91
Query: 104 LNTGEPLYNAI 114
TG+P+YNAI
Sbjct: 92 KETGKPVYNAI 102
>sp|Q8DBM6|GLPK_VIBVU Glycerol kinase OS=Vibrio vulnificus (strain CMCP6) GN=glpK PE=3
SV=1
Length = 505
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 44 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWD 103
+ + I PQ GW E DPMEI +T+ +E L G+ D + +GITNQRETT+VW+
Sbjct: 35 EFTQIYPQAGWVEHDPMEIYATQSSTL---VEALGKKGIRSDQVAAIGITNQRETTIVWN 91
Query: 104 LNTGEPLYNAI 114
TG+P+YNAI
Sbjct: 92 KETGKPVYNAI 102
>sp|A6TKR6|GLPK_ALKMQ Glycerol kinase OS=Alkaliphilus metalliredigens (strain QYMF)
GN=glpK PE=3 SV=1
Length = 500
Score = 77.0 bits (188), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 24 TSRVLIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLS 83
TS I+ + V S + + P+ GW E DPMEI Q+ + R E L G+S
Sbjct: 13 TSSRAILFDQEGKRVGSSQKEFTQFYPKAGWVEHDPMEIW-GTQSGVAR--EVLETTGIS 69
Query: 84 RDDIVTLGITNQRETTVVWDLNTGEPLYNAI 114
DI +GITNQRETT++WD NTG+P+YNAI
Sbjct: 70 TQDIAAIGITNQRETTIIWDKNTGKPIYNAI 100
>sp|Q1IE16|GLPK_PSEE4 Glycerol kinase OS=Pseudomonas entomophila (strain L48) GN=glpK
PE=3 SV=1
Length = 499
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 50 PQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEP 109
PQ GW E DPMEI TM +E L+ G+S + +GITNQRETTVVWD TG P
Sbjct: 44 PQAGWVEHDPMEIFATQSATM---VEALAQAGISHAQVAAIGITNQRETTVVWDKETGRP 100
Query: 110 LYNAI 114
+YNAI
Sbjct: 101 VYNAI 105
>sp|B1KKY8|GLPK_SHEWM Glycerol kinase OS=Shewanella woodyi (strain ATCC 51908 / MS32)
GN=glpK PE=3 SV=1
Length = 495
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Query: 44 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWD 103
+ + I PQ GW E DPMEI + +T+ IE ++ G+ +I ++GITNQRETTV+WD
Sbjct: 34 EFTQIYPQAGWVEHDPMEIWASQSSTL---IEVIARSGIHASEIASIGITNQRETTVIWD 90
Query: 104 LNTGEPLYNAI 114
TG+P+YNAI
Sbjct: 91 KQTGKPVYNAI 101
>sp|B0TWZ7|GLPK_FRAP2 Glycerol kinase OS=Francisella philomiragia subsp. philomiragia
(strain ATCC 25017) GN=glpK PE=3 SV=1
Length = 499
Score = 76.6 bits (187), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Query: 44 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWD 103
+ + I P+ GW E DPMEI A Q+++ R E L +S DI +GITNQRETTVVWD
Sbjct: 34 EFTQIYPKSGWVEHDPMEIW-ASQSSIVR--EALEYARVSPRDIAAIGITNQRETTVVWD 90
Query: 104 LNTGEPLYNAI 114
NTG+P+YNAI
Sbjct: 91 KNTGQPVYNAI 101
>sp|O87924|GLPK_PSETO Glycerol kinase OS=Pseudomonas tolaasii GN=glpK PE=3 SV=1
Length = 503
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 50 PQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEP 109
PQ GW E DPMEI M +E L+ GL D + +GITNQRETTVVWD TG P
Sbjct: 44 PQAGWVEHDPMEIFATQSAVM---VEALAQAGLHHDQVAAIGITNQRETTVVWDKVTGRP 100
Query: 110 LYNAI 114
+YNAI
Sbjct: 101 IYNAI 105
>sp|C3KBM0|GLPK_PSEFS Glycerol kinase OS=Pseudomonas fluorescens (strain SBW25) GN=glpK
PE=3 SV=1
Length = 501
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 50 PQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTGEP 109
PQ GW E DPMEI M +E L+ GL D + +GITNQRETTVVWD TG P
Sbjct: 44 PQAGWVEHDPMEIFATQSAVM---VEALAQAGLHHDQVAAIGITNQRETTVVWDKVTGRP 100
Query: 110 LYNAI 114
+YNAI
Sbjct: 101 IYNAI 105
>sp|A8MG11|GLPK_ALKOO Glycerol kinase OS=Alkaliphilus oremlandii (strain OhILAs) GN=glpK
PE=3 SV=1
Length = 504
Score = 76.3 bits (186), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 38 VVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRE 97
V + + + I P+ GW E DPMEI +E+++ +S DI +GITNQRE
Sbjct: 27 VATSQKEFTQIYPKAGWVEHDPMEIWGTQSGVAREVLERMA---ISPQDIAAIGITNQRE 83
Query: 98 TTVVWDLNTGEPLYNAI 114
TT+VWD NTG+P+YNAI
Sbjct: 84 TTIVWDKNTGKPVYNAI 100
>sp|B7VQ85|GLPK_VIBSL Glycerol kinase OS=Vibrio splendidus (strain LGP32) GN=glpK PE=3
SV=1
Length = 507
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Query: 38 VVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRE 97
V S + + I P+ GW E DPMEI +T+ +E L+ G+ D++ +GITNQRE
Sbjct: 29 VSSSQREFTQIYPKAGWVEHDPMEIWATQSSTL---VEALAKAGIRSDELAGIGITNQRE 85
Query: 98 TTVVWDLNTGEPLYNAI 114
TT+VW+ TG+P+YNAI
Sbjct: 86 TTIVWNKETGKPVYNAI 102
>sp|C6C1M7|GLPK_DESAD Glycerol kinase OS=Desulfovibrio salexigens (strain ATCC 14822 /
DSM 2638 / NCIB 8403 / VKM B-1763) GN=glpK PE=3 SV=1
Length = 495
Score = 76.3 bits (186), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
Query: 24 TSRVLIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLS 83
+SR +I Q + V+ + + I P GW E D MEI +VQ+ + A+ + A
Sbjct: 15 SSRAIIFDKAGQIQKVTQK-EFTQIFPNPGWVEHDAMEIWSSVQSVVAEALADVPAA--- 70
Query: 84 RDDIVTLGITNQRETTVVWDLNTGEPLYNAI 114
+I +GITNQRETTVVWD NTG+P+YNAI
Sbjct: 71 --EIAAIGITNQRETTVVWDKNTGKPVYNAI 99
>sp|Q9X1E4|GLPK2_THEMA Glycerol kinase 2 OS=Thermotoga maritima (strain ATCC 43589 / MSB8
/ DSM 3109 / JCM 10099) GN=glpK2 PE=3 SV=2
Length = 496
Score = 76.3 bits (186), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
Query: 48 ISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTG 107
I P+ GW E DP+EI ++ +AIE+ G+ +DI +GITNQRETT+VWD NTG
Sbjct: 36 IYPRPGWVEHDPVEIWESQIEVAKKAIEEA---GIKPEDIAAIGITNQRETTIVWDKNTG 92
Query: 108 EPLYNAI 114
+P+YNAI
Sbjct: 93 KPVYNAI 99
>sp|B2V358|GLPK_CLOBA Glycerol kinase OS=Clostridium botulinum (strain Alaska E43 / Type
E3) GN=glpK PE=3 SV=1
Length = 498
Score = 76.3 bits (186), Expect = 6e-14, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 24 TSRVLIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLS 83
TS II Q V + + I P EGW E +P+EI + + E L+ ++
Sbjct: 13 TSSRAIIFDKEQNIVGVSQKEFTQIYPHEGWVEHNPLEIWSSQYGVLQ---EVLAKTNIT 69
Query: 84 RDDIVTLGITNQRETTVVWDLNTGEPLYNAI 114
D+I +GITNQRETT+VWD NTGEP+YNAI
Sbjct: 70 ADEISAIGITNQRETTIVWDKNTGEPVYNAI 100
>sp|Q87M72|GLPK_VIBPA Glycerol kinase OS=Vibrio parahaemolyticus serotype O3:K6 (strain
RIMD 2210633) GN=glpK PE=3 SV=1
Length = 505
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 44 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWD 103
+ + I PQ GW E DPMEI +T+ +E L+ G+ D + +GITNQRETT+VW+
Sbjct: 35 EFTQIYPQAGWVEHDPMEIWATQSSTL---VEALAKSGIRSDQLAAIGITNQRETTIVWN 91
Query: 104 LNTGEPLYNAI 114
TG+P+YNAI
Sbjct: 92 KETGKPVYNAI 102
>sp|B6ER09|GLPK_ALISL Glycerol kinase OS=Aliivibrio salmonicida (strain LFI1238) GN=glpK
PE=3 SV=1
Length = 504
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 44 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWD 103
+ + I PQ GW E DP+EI +T+ +E L+ G+ D I +GITNQRETT+VW+
Sbjct: 35 EFTQIYPQAGWVEHDPLEIYATQSSTL---VETLAKAGIRSDQIAAIGITNQRETTIVWN 91
Query: 104 LNTGEPLYNAI 114
TG+P+YNAI
Sbjct: 92 KETGKPVYNAI 102
>sp|B2TN12|GLPK_CLOBB Glycerol kinase OS=Clostridium botulinum (strain Eklund 17B / Type
B) GN=glpK PE=3 SV=1
Length = 498
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 24 TSRVLIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLS 83
TS II Q V + + I P EGW E +P+EI + + E L+ ++
Sbjct: 13 TSSRAIIFDKEQNIVGVSQKEFTQIYPHEGWVEHNPLEIWSSQYGVLQ---EVLAKTNVT 69
Query: 84 RDDIVTLGITNQRETTVVWDLNTGEPLYNAI 114
D+I +GITNQRETT+VWD NTGEP+YNAI
Sbjct: 70 ADEISAIGITNQRETTIVWDKNTGEPVYNAI 100
>sp|Q0SQ01|GLPK_CLOPS Glycerol kinase OS=Clostridium perfringens (strain SM101 / Type A)
GN=glpK PE=3 SV=1
Length = 500
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 24 TSRVLIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLS 83
TS II Q + + + I P+EGW E DPMEI + + + K + ++
Sbjct: 13 TSSRAIIFDKEQNIIGVSQKEFNQIYPREGWVEHDPMEIWATQYSVLQEVMAKCN---IT 69
Query: 84 RDDIVTLGITNQRETTVVWDLNTGEPLYNAI 114
+++I +GITNQRETT+VWD NTG P+YNAI
Sbjct: 70 QENIAAIGITNQRETTIVWDKNTGVPIYNAI 100
>sp|Q0TMA0|GLPK_CLOP1 Glycerol kinase OS=Clostridium perfringens (strain ATCC 13124 /
NCTC 8237 / Type A) GN=glpK PE=3 SV=1
Length = 500
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 24 TSRVLIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLS 83
TS II Q + + + I P+EGW E DPMEI + + + K + ++
Sbjct: 13 TSSRAIIFDKEQNIIGVSQKEFNQIYPREGWVEHDPMEIWATQYSVLQEVMAKCN---IT 69
Query: 84 RDDIVTLGITNQRETTVVWDLNTGEPLYNAI 114
+++I +GITNQRETT+VWD NTG P+YNAI
Sbjct: 70 QENIAAIGITNQRETTIVWDKNTGVPIYNAI 100
>sp|Q8XHD3|GLPK_CLOPE Glycerol kinase OS=Clostridium perfringens (strain 13 / Type A)
GN=glpK PE=3 SV=1
Length = 500
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 24 TSRVLIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLS 83
TS II Q + + + I P+EGW E DPMEI + + + K + ++
Sbjct: 13 TSSRAIIFDKEQNIIGVSQKEFNQIYPREGWVEHDPMEIWATQYSVLQEVMAKCN---IT 69
Query: 84 RDDIVTLGITNQRETTVVWDLNTGEPLYNAI 114
+++I +GITNQRETT+VWD NTG P+YNAI
Sbjct: 70 QENIAAIGITNQRETTIVWDKNTGVPIYNAI 100
>sp|Q07WH4|GLPK_SHEFN Glycerol kinase OS=Shewanella frigidimarina (strain NCIMB 400)
GN=glpK PE=3 SV=1
Length = 498
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 10/85 (11%)
Query: 30 ISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVT 89
I A+ Q E H PQ GW E DPMEI + + + +E L+ G+SR D+
Sbjct: 28 IVAVAQREFTQHY-------PQAGWVEHDPMEIWSSQSSAL---VEVLTRAGISRHDVAA 77
Query: 90 LGITNQRETTVVWDLNTGEPLYNAI 114
+GITNQRETT+VW+ +TG+P+ NAI
Sbjct: 78 IGITNQRETTIVWNKHTGKPVCNAI 102
>sp|A5UU55|GLPK_ROSS1 Glycerol kinase OS=Roseiflexus sp. (strain RS-1) GN=glpK PE=3 SV=1
Length = 498
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Query: 48 ISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTG 107
I PQ GW E DP+EI Q +D A+ K G+ R +I +G+TNQRETTVVW+ TG
Sbjct: 37 IYPQPGWVEHDPLEIWTRTQEVIDGALRK---SGVERSEIAAVGVTNQRETTVVWEKATG 93
Query: 108 EPLYNAI 114
+P+YNAI
Sbjct: 94 KPVYNAI 100
>sp|A8FQ89|GLPK_SHESH Glycerol kinase OS=Shewanella sediminis (strain HAW-EB3) GN=glpK
PE=3 SV=1
Length = 495
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Query: 48 ISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDLNTG 107
I PQ GW E DPMEI + +T+ IE L+ G+ ++ +GITNQRETTV+WD TG
Sbjct: 38 IYPQAGWVEHDPMEIWASQSSTL---IELLARSGIHGSEVAAIGITNQRETTVIWDKLTG 94
Query: 108 EPLYNAI 114
+P+YNAI
Sbjct: 95 KPVYNAI 101
>sp|P57944|GLPK_PASMU Glycerol kinase OS=Pasteurella multocida (strain Pm70) GN=glpK PE=3
SV=1
Length = 502
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 44 DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWD 103
+ + I PQ GW E +PMEI +T++ + K G++ D I +GITNQRETT+VW+
Sbjct: 35 EFTQIYPQAGWVEHNPMEIWATQSSTLNEVVAKA---GITADQIAAIGITNQRETTIVWE 91
Query: 104 LNTGEPLYNAI 114
TG+P+YNAI
Sbjct: 92 KETGKPIYNAI 102
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,531,285
Number of Sequences: 539616
Number of extensions: 1537408
Number of successful extensions: 6731
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 5914
Number of HSP's gapped (non-prelim): 493
length of query: 129
length of database: 191,569,459
effective HSP length: 95
effective length of query: 34
effective length of database: 140,305,939
effective search space: 4770401926
effective search space used: 4770401926
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)