BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15820
(230 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 124 bits (311), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 95/151 (62%), Gaps = 7/151 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGP---CIVAVKTLKENAGERERL 67
D +WE+PR + + LGEG FGQV EA+G+D ++ P VAVK LK +A E++
Sbjct: 12 DPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATEKDLS 70
Query: 68 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRA---QRYYN 124
DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+ +L++ R + YN
Sbjct: 71 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 130
Query: 125 NMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
H L+S+DL S YQVARGM++L+S+
Sbjct: 131 PSHNPEEQLSSKDLVSCAYQVARGMEYLASK 161
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G+R++KP +C ELY +M CW P++RP F
Sbjct: 257 LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF 291
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 124 bits (310), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 95/151 (62%), Gaps = 7/151 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGP---CIVAVKTLKENAGERERL 67
D +WE+PR + + LGEG FGQV EA+G+D ++ P VAVK LK +A E++
Sbjct: 61 DPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATEKDLS 119
Query: 68 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRA---QRYYN 124
DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+ +L++ R + YN
Sbjct: 120 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 179
Query: 125 NMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
H L+S+DL S YQVARGM++L+S+
Sbjct: 180 PSHNPEEQLSSKDLVSCAYQVARGMEYLASK 210
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G+R++KP +C ELY +M CW P++RP F
Sbjct: 306 LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF 340
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 124 bits (310), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 95/151 (62%), Gaps = 7/151 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGP---CIVAVKTLKENAGERERL 67
D +WE+PR + + LGEG FGQV EA+G+D ++ P VAVK LK +A E++
Sbjct: 9 DPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATEKDLS 67
Query: 68 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRA---QRYYN 124
DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+ +L++ R + YN
Sbjct: 68 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 127
Query: 125 NMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
H L+S+DL S YQVARGM++L+S+
Sbjct: 128 PSHNPEEQLSSKDLVSCAYQVARGMEYLASK 158
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G+R++KP +C ELY +M CW P++RP F
Sbjct: 254 LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF 288
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 124 bits (310), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 95/151 (62%), Gaps = 7/151 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGP---CIVAVKTLKENAGERERL 67
D +WE+PR + + LGEG FGQV EA+G+D ++ P VAVK LK +A E++
Sbjct: 13 DPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATEKDLS 71
Query: 68 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRA---QRYYN 124
DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+ +L++ R + YN
Sbjct: 72 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 131
Query: 125 NMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
H L+S+DL S YQVARGM++L+S+
Sbjct: 132 PSHNPEEQLSSKDLVSCAYQVARGMEYLASK 162
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G+R++KP +C ELY +M CW P++RP F
Sbjct: 258 LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF 292
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 124 bits (310), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 95/151 (62%), Gaps = 7/151 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGP---CIVAVKTLKENAGERERL 67
D +WE+PR + + LGEG FGQV EA+G+D ++ P VAVK LK +A E++
Sbjct: 20 DPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATEKDLS 78
Query: 68 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRA---QRYYN 124
DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+ +L++ R + YN
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 138
Query: 125 NMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
H L+S+DL S YQVARGM++L+S+
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASK 169
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G+R++KP +C ELY +M CW P++RP F
Sbjct: 265 LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF 299
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 123 bits (308), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 95/151 (62%), Gaps = 7/151 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGP---CIVAVKTLKENAGERERL 67
D +WE+PR + + LGEG FGQV EA+G+D ++ P VAVK LK +A E++
Sbjct: 20 DPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATEKDLS 78
Query: 68 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRA---QRYYN 124
DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+ +L++ R + YN
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYN 138
Query: 125 NMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
H L+S+DL S YQVARGM++L+S+
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASK 169
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G+R++KP +C ELY +M CW P++RP F
Sbjct: 265 LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF 299
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 95/151 (62%), Gaps = 7/151 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGP---CIVAVKTLKENAGERERL 67
D +WE+PR + + LGEG FGQV EA+G+D ++ P VAVK LK +A E++
Sbjct: 5 DPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATEKDLS 63
Query: 68 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRA---QRYYN 124
DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+ +L++ R + YN
Sbjct: 64 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYN 123
Query: 125 NMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
H L+S+DL S YQVARGM++L+S+
Sbjct: 124 PSHNPEEQLSSKDLVSCAYQVARGMEYLASK 154
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G+R++KP +C ELY +M CW P++RP F
Sbjct: 250 LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF 284
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 122 bits (306), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 95/151 (62%), Gaps = 7/151 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGP---CIVAVKTLKENAGERERL 67
D +WE+PR + + LGEG FGQV EA+G+D ++ P VAVK LK +A E++
Sbjct: 20 DPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATEKDLS 78
Query: 68 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRA---QRYYN 124
DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+ +L++ R + +N
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFN 138
Query: 125 NMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
H L+S+DL S YQVARGM++L+S+
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASK 169
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G+R++KP +C ELY +M CW P++RP F
Sbjct: 265 LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF 299
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 94/151 (62%), Gaps = 7/151 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGP---CIVAVKTLKENAGERERL 67
D +WE+PR + + LGEG FGQV EA+G+D ++ P VAVK LK +A E++
Sbjct: 20 DPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATEKDLS 78
Query: 68 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRA---QRYYN 124
DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+ +L++ + YN
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYN 138
Query: 125 NMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
H L+S+DL S YQVARGM++L+S+
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASK 169
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G+R++KP +C ELY +M CW P++RP F
Sbjct: 265 LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF 299
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 94/151 (62%), Gaps = 7/151 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGP---CIVAVKTLKENAGERERL 67
D KWE PR + + LGEGCFGQV EA+GID ++ P VAVK LK++A E++
Sbjct: 73 DPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGID-KDKPKEAVTVAVKMLKDDATEKDLS 131
Query: 68 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRA---QRYYN 124
DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+ +LR+ R + Y+
Sbjct: 132 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 191
Query: 125 NMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
+T +DL S YQ+ARGM++L+S+
Sbjct: 192 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ 222
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G+R++KP +C ELY +M CW P++RP F
Sbjct: 318 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 352
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 100/167 (59%), Gaps = 13/167 (7%)
Query: 1 MNDPVLNQKS------DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGP---CI 51
M+ P+L S D KWE PR + + LGEGCFGQV EA+GID ++ P
Sbjct: 3 MDTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGID-KDKPKEAVT 61
Query: 52 VAVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQ 111
VAVK LK++A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 121
Query: 112 SFLRSSR---AQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
+LR+ R + Y+ +T +DL S YQ+ARGM++L+S+
Sbjct: 122 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 168
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G+R++KP +C ELY +M CW P++RP F
Sbjct: 264 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 298
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 94/151 (62%), Gaps = 7/151 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGP---CIVAVKTLKENAGERERL 67
D KWE PR + + LGEGCFGQV EA+GID ++ P VAVK LK++A E++
Sbjct: 14 DPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGID-KDKPKEAVTVAVKMLKDDATEKDLS 72
Query: 68 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSR---AQRYYN 124
DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+ +LR+ R + Y+
Sbjct: 73 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 132
Query: 125 NMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
+T +DL S YQ+ARGM++L+S+
Sbjct: 133 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ 163
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G+R++KP +C ELY +M CW P++RP F
Sbjct: 259 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 293
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 94/151 (62%), Gaps = 7/151 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGP---CIVAVKTLKENAGERERL 67
D KWE PR + + LGEGCFGQV EA+GID ++ P VAVK LK++A E++
Sbjct: 16 DPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGID-KDKPKEAVTVAVKMLKDDATEKDLS 74
Query: 68 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRA---QRYYN 124
DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+ +LR+ R + Y+
Sbjct: 75 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 134
Query: 125 NMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
+T +DL S YQ+ARGM++L+S+
Sbjct: 135 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ 165
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G+R++KP +C ELY +M CW P++RP F
Sbjct: 261 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 295
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 98/165 (59%), Gaps = 13/165 (7%)
Query: 3 DPVLNQKS------DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGP---CIVA 53
DP+L S D KWE PR + + LGEG FGQV EA+GID ++ P VA
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGID-KDKPKEAVTVA 71
Query: 54 VKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF 113
VK LK++A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+ +
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 131
Query: 114 LRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
LR+ R + Y+ +T +DL S YQ+ARGM++L+S+
Sbjct: 132 LRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 176
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G+R++KP +C ELY +M CW P++RP F
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 306
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 90/154 (58%), Gaps = 12/154 (7%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D KWE PR+++ + LGEG FG+V K A + GR G VAVK LKENA E DLL
Sbjct: 15 DPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLL 74
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSR--AQRYYNNM-- 126
E V+K ++ HP+V++L G C++ P +I+EY YG L+ FLR SR Y +
Sbjct: 75 SEFNVLKQVN-HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 127 -------HGKSNSLTSRDLTSFCYQVARGMQFLS 153
H +LT DL SF +Q+++GMQ+L+
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLA 167
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
++ G+R+E+PD+C E+Y +M CW +EP++RP F
Sbjct: 265 LKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFA 300
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 90/154 (58%), Gaps = 12/154 (7%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D KWE PR+++ + LGEG FG+V K A + GR G VAVK LKENA E DLL
Sbjct: 15 DPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLL 74
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSR--AQRYYNNM-- 126
E V+K ++ HP+V++L G C++ P +I+EY YG L+ FLR SR Y +
Sbjct: 75 SEFNVLKQVN-HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 127 -------HGKSNSLTSRDLTSFCYQVARGMQFLS 153
H +LT DL SF +Q+++GMQ+L+
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLA 167
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
++ G+R+E+PD+C E+Y +M CW +EP++RP F
Sbjct: 265 LKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFA 300
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 90/154 (58%), Gaps = 12/154 (7%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D KWE PR+++ + LGEG FG+V K A + GR G VAVK LKENA E DLL
Sbjct: 15 DPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLL 74
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSR--AQRYYNNM-- 126
E V+K ++ HP+V++L G C++ P +I+EY YG L+ FLR SR Y +
Sbjct: 75 SEFNVLKQVN-HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 127 -------HGKSNSLTSRDLTSFCYQVARGMQFLS 153
H +LT DL SF +Q+++GMQ+L+
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLA 167
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
++ G+R+E+PD+C E+Y +M CW +EP++RP F
Sbjct: 265 LKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFA 300
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 98/166 (59%), Gaps = 13/166 (7%)
Query: 2 NDPVLNQKS------DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGP---CIV 52
DP+L S D KWE PR + + LGEG FGQV EA+GID ++ P V
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGID-KDKPKEAVTV 70
Query: 53 AVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQS 112
AVK LK++A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+
Sbjct: 71 AVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLRE 130
Query: 113 FLRSSR---AQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
+LR+ R + Y+ +T +DL S YQ+ARGM++L+S+
Sbjct: 131 YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 176
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G+R++KP +C ELY +M CW P++RP F
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 306
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 98/165 (59%), Gaps = 13/165 (7%)
Query: 3 DPVLNQKS------DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGP---CIVA 53
DP+L S D KWE PR + + LGEG FGQV EA+GID ++ P VA
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGID-KDKPKEAVTVA 71
Query: 54 VKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF 113
VK LK++A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+ +
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 131
Query: 114 LRSSR---AQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
LR+ R + Y+ +T +DL S YQ+ARGM++L+S+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 176
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G+R++KP +C ELY +M CW P++RP F
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 306
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 98/165 (59%), Gaps = 13/165 (7%)
Query: 3 DPVLNQKS------DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGP---CIVA 53
DP+L S D KWE PR + + LGEG FGQV EA+GID ++ P VA
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGID-KDKPKEAVTVA 71
Query: 54 VKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF 113
VK LK++A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+ +
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 131
Query: 114 LRSSR---AQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
LR+ R + Y+ +T +DL S YQ+ARGM++L+S+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 176
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G+R++KP +C ELY +M CW P++RP F
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 306
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 98/166 (59%), Gaps = 13/166 (7%)
Query: 2 NDPVLNQKS------DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGP---CIV 52
DP+L S D KWE PR + + LGEG FGQV EA+GID ++ P V
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGID-KDKPKEAVTV 70
Query: 53 AVKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQS 112
AVK LK++A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+
Sbjct: 71 AVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLRE 130
Query: 113 FLRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
+LR+ R + Y+ +T +DL S YQ+ARGM++L+S+
Sbjct: 131 YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 176
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G+R++KP +C ELY +M CW P++RP F
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 306
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 98/165 (59%), Gaps = 13/165 (7%)
Query: 3 DPVLNQKS------DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGP---CIVA 53
DP+L S D KWE PR + + LGEG FGQV EA+GID ++ P VA
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGID-KDKPKEAVTVA 71
Query: 54 VKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF 113
VK LK++A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+ +
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 131
Query: 114 LRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
LR+ R + Y+ +T +DL S YQ+ARGM++L+S+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 176
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G+R++KP +C ELY +M CW P++RP F
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 306
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 97/165 (58%), Gaps = 13/165 (7%)
Query: 3 DPVLNQKS------DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGP---CIVA 53
DP+L S D KWE PR + + LGEG FGQV EA+GID ++ P VA
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGID-KDKPKEAVTVA 71
Query: 54 VKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF 113
VK LK++A E + DL+ E+ +MK + H N++ LLG CT+ P +VI+EY G L+ +
Sbjct: 72 VKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 131
Query: 114 LRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
LR+ R + Y+ +T +DL S YQ+ARGM++L+S+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 176
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G+R++KP +C ELY +M CW P++RP F
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 306
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 117 bits (293), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 82/148 (55%), Gaps = 3/148 (2%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
++KWE PR +++ LG G FG+V + A G+ + VAVK LK A E+ L+
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRA---QRYYNNMH 127
EL +M L H N+V LLG CT P VI EY YG L +FLR R + YN H
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSH 157
Query: 128 GKSNSLTSRDLTSFCYQVARGMQFLSSR 155
L+SRDL F QVA+GM FL+S+
Sbjct: 158 NPEEQLSSRDLLHFSSQVAQGMAFLASK 185
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V+DGY++ +P + +Y+IM CW EP RP F
Sbjct: 282 VKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTF 316
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 117 bits (292), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 97/165 (58%), Gaps = 13/165 (7%)
Query: 3 DPVLNQKS------DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGP---CIVA 53
DP+L S D KWE PR + + LGEG FGQV EA+GID ++ P VA
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGID-KDKPKEAVTVA 71
Query: 54 VKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF 113
VK LK++A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+ Y G L+ +
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREY 131
Query: 114 LRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
LR+ R + Y+ +T +DL S YQ+ARGM++L+S+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 176
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G+R++KP +C ELY +M CW P++RP F
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 306
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 97/165 (58%), Gaps = 13/165 (7%)
Query: 3 DPVLNQKS------DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGP---CIVA 53
DP+L S D KWE PR + + LGEG FGQV EA+GID ++ P VA
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGID-KDKPKEAVTVA 71
Query: 54 VKTLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF 113
VK LK++A E++ DL+ E+ +MK + H N++ LLG CT+ P +VI+ Y G L+ +
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREY 131
Query: 114 LRSSRA---QRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
LR+ R + Y+ +T +DL S YQ+ARGM++L+S+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 176
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G+R++KP +C ELY +M CW P++RP F
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 306
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 83/152 (54%), Gaps = 10/152 (6%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D KWE PR++++ +LG G FG+V A GI VAVK LKE A ER L+
Sbjct: 37 DLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALM 96
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
EL +M L H N+V LLG CT P ++I EY YG L ++LRS R + + + ++
Sbjct: 97 SELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYEN 156
Query: 131 ----------NSLTSRDLTSFCYQVARGMQFL 152
N LT DL F YQVA+GM+FL
Sbjct: 157 QKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFL 188
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 24/35 (68%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G+++++P + E+Y IM CW + +RP+F
Sbjct: 288 IQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSF 322
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 82/146 (56%), Gaps = 1/146 (0%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
++KWE PR +++ LG G FG+V + A G+ + VAVK LK A E+ L+
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL-RSSRAQRYYNNMHGK 129
EL +M L H N+V LLG CT P VI EY YG L +FL R SR
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA 157
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+++L++RDL F QVA+GM FL+S+
Sbjct: 158 NSTLSTRDLLHFSSQVAQGMAFLASK 183
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V+DGY++ +P + +Y+IM CW EP RP F
Sbjct: 280 VKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTF 314
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
++KWE PR +++ LG G FG+V + A G+ + VAVK LK A E+ L+
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL-RSSRAQRYYNNMHGK 129
EL +M L H N+V LLG CT P VI EY YG L +FL R SR
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA 157
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+++ ++RDL F QVA+GM FL+S+
Sbjct: 158 NSTASTRDLLHFSSQVAQGMAFLASK 183
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V+DGY++ +P + +Y+IM CW EP RP F
Sbjct: 280 VKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTF 314
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
KWE PR +K+ LG G FGQV + +A GID VAVK LKE A E L+ E
Sbjct: 23 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSE 82
Query: 73 LTVMKTLDPHPNVVRLLGCCTEK-EPFFVIMEYVPYGKLQSFLRSSRAQRY-YNNMHGKS 130
L ++ + H NVV LLG CT+ P VI+E+ +G L ++LRS R + Y
Sbjct: 83 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYK 142
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSR 155
+ LT L + +QVA+GM+FL+SR
Sbjct: 143 DFLTLEHLIXYSFQVAKGMEFLASR 167
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
R +++G R+ PD+ E+Y M CW EP++RP F+
Sbjct: 262 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 299
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 84/145 (57%), Gaps = 4/145 (2%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
KWE PR + + LG G FGQV + +A GID VAVK LKE A E L+ E
Sbjct: 21 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSE 80
Query: 73 LTVMKTLDPHPNVVRLLGCCTEK-EPFFVIMEYVPYGKLQSFLRSSRAQRY-YNNMHGKS 130
L ++ + H NVV LLG CT+ P VI+E+ +G L ++LRS R + Y +++
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLY--K 138
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSR 155
+ LT L + +QVA+GM+FL+SR
Sbjct: 139 DFLTLEHLIXYSFQVAKGMEFLASR 163
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
R +++G R+ PD+ E+Y M CW EP++RP F+
Sbjct: 258 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 295
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 81/145 (55%), Gaps = 3/145 (2%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
++KWE PR +++ LG G FG+V + A G+ + VAVK LK A E+ L+
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
EL +M L H N+V LLG CT P VI EY YG L +FLR +A+ + G+
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR-RKAEADLDKEDGR- 155
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSR 155
L RDL F QVA+GM FL+S+
Sbjct: 156 -PLELRDLLHFSSQVAQGMAFLASK 179
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V+DGY++ +P + +Y+IM CW EP RP F
Sbjct: 276 VKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTF 310
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 81/145 (55%), Gaps = 3/145 (2%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
++KWE PR +++ LG G FG+V + A G+ + VAVK LK A E+ L+
Sbjct: 30 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 89
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
EL +M L H N+V LLG CT P VI EY YG L +FLR +A+ + G+
Sbjct: 90 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR-RKAEADLDKEDGR- 147
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSR 155
L RDL F QVA+GM FL+S+
Sbjct: 148 -PLELRDLLHFSSQVAQGMAFLASK 171
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V+DGY++ +P + +Y+IM CW EP RP F
Sbjct: 268 VKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTF 302
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 84/145 (57%), Gaps = 4/145 (2%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
KWE PR + + LG G FGQV + +A GID VAVK LKE A E L+ E
Sbjct: 21 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSE 80
Query: 73 LTVMKTLDPHPNVVRLLGCCTEK-EPFFVIMEYVPYGKLQSFLRSSRAQRY-YNNMHGKS 130
L ++ + H NVV LLG CT+ P VI+E+ +G L ++LRS R + Y +++
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLY--K 138
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSR 155
+ LT L + +QVA+GM+FL+SR
Sbjct: 139 DFLTLEHLICYSFQVAKGMEFLASR 163
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
R +++G R+ PD+ E+Y M CW EP++RP F+
Sbjct: 258 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 295
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 83/147 (56%), Gaps = 4/147 (2%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
KWE PR +K+ LG G FGQV + +A GID VAVK LKE A E L+ E
Sbjct: 58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 117
Query: 73 LTVMKTLDPHPNVVRLLGCCTEK-EPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK-- 129
L ++ + H NVV LLG CT+ P VI+E+ +G L ++LRS R + + +
Sbjct: 118 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 177
Query: 130 -SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ LT L + +QVA+GM+FL+SR
Sbjct: 178 YKDFLTLEHLICYSFQVAKGMEFLASR 204
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
R +++G R+ PD+ E+Y M CW EP++RP F+
Sbjct: 299 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 336
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 83/147 (56%), Gaps = 4/147 (2%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
KWE PR +K+ LG G FGQV + +A GID VAVK LKE A E L+ E
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 80
Query: 73 LTVMKTLDPHPNVVRLLGCCTEK-EPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK-- 129
L ++ + H NVV LLG CT+ P VI+E+ +G L ++LRS R + + +
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 140
Query: 130 -SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ LT L + +QVA+GM+FL+SR
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFLASR 167
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
R +++G R+ PD+ E+Y M CW EP++RP F+
Sbjct: 262 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 299
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 83/147 (56%), Gaps = 4/147 (2%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
KWE PR +K+ LG G FGQV + +A GID VAVK LKE A E L+ E
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 73 LTVMKTLDPHPNVVRLLGCCTEK-EPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK-- 129
L ++ + H NVV LLG CT+ P VI+E+ +G L ++LRS R + + +
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 131
Query: 130 -SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ LT L + +QVA+GM+FL+SR
Sbjct: 132 YKDFLTLEHLICYSFQVAKGMEFLASR 158
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
R +++G R+ PD+ E+Y M CW EP++RP F+
Sbjct: 253 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 290
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 83/147 (56%), Gaps = 4/147 (2%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
KWE PR +K+ LG G FGQV + +A GID VAVK LKE A E L+ E
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 80
Query: 73 LTVMKTLDPHPNVVRLLGCCTEK-EPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK-- 129
L ++ + H NVV LLG CT+ P VI+E+ +G L ++LRS R + + +
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 140
Query: 130 -SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ LT L + +QVA+GM+FL+SR
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFLASR 167
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
R +++G R+ PD+ E+Y M CW EP++RP F+
Sbjct: 262 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 299
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 103 bits (257), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 83/147 (56%), Gaps = 4/147 (2%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
KWE PR +K+ LG G FGQV + +A GID VAVK LKE A E L+ E
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 80
Query: 73 LTVMKTLDPHPNVVRLLGCCTEK-EPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK-- 129
L ++ + H NVV LLG CT+ P VI+E+ +G L ++LRS R + + +
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 140
Query: 130 -SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ LT L + +QVA+GM+FL+SR
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFLASR 167
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
R +++G R+ PD+ E+Y M CW EP++RP F+
Sbjct: 262 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 299
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 82/147 (55%), Gaps = 4/147 (2%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
KWE PR +K+ LG G FGQV + +A GID VAVK LKE A E L+ E
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 73 LTVMKTLDPHPNVVRLLGCCTEK-EPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK-- 129
L ++ + H NVV LLG CT+ P VI E+ +G L ++LRS R + + +
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 131
Query: 130 -SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ LT L + +QVA+GM+FL+SR
Sbjct: 132 YKDFLTLEHLICYSFQVAKGMEFLASR 158
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
R +++G R+ PD+ E+Y M CW EP++RP F+
Sbjct: 253 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 290
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
KWE PR + + LG G FGQV + +A GID VAVK LKE A E L+ E
Sbjct: 22 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 81
Query: 73 LTVMKTLDPHPNVVRLLGCCTEK-EPFFVIMEYVPYGKLQSFLRSSRAQ--RYYNNMHGK 129
L ++ + H NVV LLG CT+ P VI+E+ +G L ++LRS R + Y
Sbjct: 82 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLY 141
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ LT L + +QVA+GM+FL+SR
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASR 167
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
R +++G R+ PD+ E+Y M CW EP++RP F+
Sbjct: 262 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 299
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 82/147 (55%), Gaps = 4/147 (2%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
KWE PR +K+ LG G FGQV + +A GID VAVK LKE A E L+ E
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 73 LTVMKTLDPHPNVVRLLGCCTEK-EPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK-- 129
L ++ + H NVV LLG CT+ P VI E+ +G L ++LRS R + + +
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 131
Query: 130 -SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ LT L + +QVA+GM+FL+SR
Sbjct: 132 YKDFLTLEHLICYSFQVAKGMEFLASR 158
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
R +++G R+ PD+ E+Y M CW EP++RP F+
Sbjct: 253 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 290
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 82/147 (55%), Gaps = 4/147 (2%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
KWE PR +K+ LG G FGQV + +A GID VAVK LKE A E L+ E
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 73 LTVMKTLDPHPNVVRLLGCCTEK-EPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK-- 129
L ++ + H NVV LLG CT+ P VI E+ +G L ++LRS R + + +
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 131
Query: 130 -SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ LT L + +QVA+GM+FL+SR
Sbjct: 132 YKDFLTLEHLICYSFQVAKGMEFLASR 158
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
R +++G R+ PD+ E+Y M CW EP++RP F+
Sbjct: 253 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 290
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 82/147 (55%), Gaps = 4/147 (2%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
KWE PR +K+ LG G FGQV + +A GID VAVK LKE A E L+ E
Sbjct: 23 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 82
Query: 73 LTVMKTLDPHPNVVRLLGCCTEK-EPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK-- 129
L ++ + H NVV LLG CT+ P VI+E+ +G L ++LRS R + +
Sbjct: 83 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDL 142
Query: 130 -SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ LT L + +QVA+GM+FL+SR
Sbjct: 143 YKDFLTLEHLICYSFQVAKGMEFLASR 169
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
R +++G R+ PD+ E+Y M CW EP++RP F+
Sbjct: 264 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 301
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 80/160 (50%), Gaps = 20/160 (12%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
++KWE PR +++ LG G FG+V + A G+ + VAVK LK A E+ L+
Sbjct: 23 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 82
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
EL +M L H N+V LLG CT P VI EY YG L +FLR R M G S
Sbjct: 83 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR-----RKAEAMLGPS 137
Query: 131 NS---------------LTSRDLTSFCYQVARGMQFLSSR 155
+ L RDL F QVA+GM FL+S+
Sbjct: 138 LAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK 177
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V+DGY++ +P + +Y+IM CW EP RP F
Sbjct: 274 VKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTF 308
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 79/150 (52%), Gaps = 5/150 (3%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D KWE PR + LG G FG+V + A G+ + VAVK LK +A ER L+
Sbjct: 38 DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALM 97
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSR-----AQRYYNN 125
EL V+ L H N+V LLG CT P VI EY YG L +FLR R ++
Sbjct: 98 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAI 157
Query: 126 MHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
M +L DL SF YQVA+GM FL+S+
Sbjct: 158 MEDDELALDLEDLLSFSYQVAKGMAFLASK 187
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFTXXXXXXXXXXXXXTDYI 209
+++G+R+ P+H E+Y+IM CWD +P +RP F T++I
Sbjct: 284 IKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHI 336
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 79/150 (52%), Gaps = 5/150 (3%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D KWE PR + LG G FG+V + A G+ + VAVK LK +A ER L+
Sbjct: 38 DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALM 97
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSR-----AQRYYNN 125
EL V+ L H N+V LLG CT P VI EY YG L +FLR R ++
Sbjct: 98 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAI 157
Query: 126 MHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
M +L DL SF YQVA+GM FL+S+
Sbjct: 158 MEDDELALDLEDLLSFSYQVAKGMAFLASK 187
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFTXXXXXXXXXXXXXTDYI 209
+++G+R+ P+H E+Y+IM CWD +P +RP F T++I
Sbjct: 284 IKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHI 336
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 79/150 (52%), Gaps = 5/150 (3%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D KWE PR + LG G FG+V + A G+ + VAVK LK +A ER L+
Sbjct: 33 DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALM 92
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSR-----AQRYYNN 125
EL V+ L H N+V LLG CT P VI EY YG L +FLR R ++
Sbjct: 93 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAI 152
Query: 126 MHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
M +L DL SF YQVA+GM FL+S+
Sbjct: 153 MEDDELALDLEDLLSFSYQVAKGMAFLASK 182
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFTXXXXXXXXXXXXXTDYI 209
+++G+R+ P+H E+Y+IM CWD +P +RP F T++I
Sbjct: 279 IKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHI 331
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 79/150 (52%), Gaps = 5/150 (3%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D KWE PR + LG G FG+V + A G+ + VAVK LK +A ER L+
Sbjct: 15 DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALM 74
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSR-----AQRYYNN 125
EL V+ L H N+V LLG CT P VI EY YG L +FLR R ++
Sbjct: 75 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAI 134
Query: 126 MHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
M +L DL SF YQVA+GM FL+S+
Sbjct: 135 MEDDELALDLEDLLSFSYQVAKGMAFLASK 164
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFTXXXXXXXXXXXXXTDYI 209
+++G+R+ P+H E+Y+IM CWD +P +RP F T++I
Sbjct: 261 IKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHI 313
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 79/150 (52%), Gaps = 5/150 (3%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D KWE PR + LG G FG+V + A G+ + VAVK LK +A ER L+
Sbjct: 31 DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALM 90
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSR-----AQRYYNN 125
EL V+ L H N+V LLG CT P VI EY YG L +FLR R ++
Sbjct: 91 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAI 150
Query: 126 MHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
M +L DL SF YQVA+GM FL+S+
Sbjct: 151 MEDDELALDLEDLLSFSYQVAKGMAFLASK 180
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFTXXXXXXXXXXXXXTDYI 209
+++G+R+ P+H E+Y+IM CWD +P +RP F T++I
Sbjct: 277 IKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHI 329
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 86/144 (59%), Gaps = 4/144 (2%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D+WEV R+ I + LG+G FG V++ A I E VAVKT+ E+A RER++ L
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E +VMK H +VVRLLG ++ +P V+ME + +G L+S+LRS R + N G+
Sbjct: 70 EASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEA--ENNPGRPP 126
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
T +++ ++A GM +L+++
Sbjct: 127 P-TLQEMIQMAAEIADGMAYLNAK 149
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 137 DLTSFCYQVARGM---QFLSSRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
++TS Q +G+ Q L + V DG L++PD+C + ++M CW PN RP F
Sbjct: 224 EITSLAEQPYQGLSNEQVL--KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTF 279
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 86/144 (59%), Gaps = 4/144 (2%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D+WEV R+ I + LG+G FG V++ A I E VAVKT+ E+A RER++ L
Sbjct: 11 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 70
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E +VMK H +VVRLLG ++ +P V+ME + +G L+S+LRS R + N G+
Sbjct: 71 EASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEA--ENNPGRPP 127
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
T +++ ++A GM +L+++
Sbjct: 128 P-TLQEMIQMAAEIADGMAYLNAK 150
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 137 DLTSFCYQVARGM---QFLSSRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
++TS Q +G+ Q L + V DG L++PD+C + ++M CW PN RP F
Sbjct: 225 EITSLAEQPYQGLSNEQVL--KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTF 280
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 86/144 (59%), Gaps = 4/144 (2%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D+WEV R+ I + LG+G FG V++ A I E VAVKT+ E+A RER++ L
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E +VMK H +VVRLLG ++ +P V+ME + +G L+S+LRS R + N G+
Sbjct: 70 EASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEA--ENNPGRPP 126
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
T +++ ++A GM +L+++
Sbjct: 127 P-TLQEMIQMAAEIADGMAYLNAK 149
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 137 DLTSFCYQVARGM---QFLSSRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
++TS Q +G+ Q L + V DG L++PD+C + ++M CW P RP F
Sbjct: 224 EITSLAEQPYQGLSNEQVL--KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF 279
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 86/144 (59%), Gaps = 4/144 (2%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D+WEV R+ I + LG+G FG V++ A I E VAVKT+ E+A RER++ L
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E +VMK H +VVRLLG ++ +P V+ME + +G L+S+LRS R + N G+
Sbjct: 70 EASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE--AENNPGRPP 126
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
T +++ ++A GM +L+++
Sbjct: 127 P-TLQEMIQMAAEIADGMAYLNAK 149
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 137 DLTSFCYQVARGM---QFLSSRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
++TS Q +G+ Q L + V DG L++PD+C + ++M CW PN RP F
Sbjct: 224 EITSLAEQPYQGLSNEQVL--KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTF 279
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 86/144 (59%), Gaps = 4/144 (2%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D+WEV R+ I + LG+G FG V++ A I E VAVKT+ E+A RER++ L
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E +VMK H +VVRLLG ++ +P V+ME + +G L+S+LRS R + N G+
Sbjct: 70 EASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEA--ENNPGRPP 126
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
T +++ ++A GM +L+++
Sbjct: 127 P-TLQEMIQMAAEIADGMAYLNAK 149
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 137 DLTSFCYQVARGM---QFLSSRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
++TS Q +G+ Q L + V DG L++PD+C + ++M CW P RP F
Sbjct: 224 EITSLAEQPYQGLSNEQVL--KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF 279
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 86/144 (59%), Gaps = 4/144 (2%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D+WEV R+ I + LG+G FG V++ A I E VAVKT+ E+A RER++ L
Sbjct: 7 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 66
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E +VMK H +VVRLLG ++ +P V+ME + +G L+S+LRS R + N G+
Sbjct: 67 EASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE--AENNPGRPP 123
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
T +++ ++A GM +L+++
Sbjct: 124 P-TLQEMIQMAAEIADGMAYLNAK 146
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 137 DLTSFCYQVARGM---QFLSSRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
++TS Q +G+ Q L + V DG L++PD+C + ++M CW P RP F
Sbjct: 221 EITSLAEQPYQGLSNEQVL--KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF 276
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 86/144 (59%), Gaps = 4/144 (2%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D+WEV R+ I + LG+G FG V++ A I E VAVKT+ E+A RER++ L
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E +VMK H +VVRLLG ++ +P V+ME + +G L+S+LRS R + N G+
Sbjct: 70 EASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE--AENNPGRPP 126
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
T +++ ++A GM +L+++
Sbjct: 127 P-TLQEMIQMAAEIADGMAYLNAK 149
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 137 DLTSFCYQVARGM---QFLSSRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
++TS Q +G+ Q L + V DG L++PD+C + ++M CW P RP F
Sbjct: 224 EITSLAEQPYQGLSNEQVL--KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF 279
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 84/143 (58%), Gaps = 4/143 (2%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D+WEV R+ I + LG+G FG V++ A G+ E VA+KT+ E A RER++ L
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E +VMK + H +VVRLLG ++ +P VIME + G L+S+LRS R + NN
Sbjct: 71 EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE-MENNPVLAPP 128
Query: 132 SLTSRDLTSFCYQVARGMQFLSS 154
SL+ + ++A GM +L++
Sbjct: 129 SLSK--MIQMAGEIADGMAYLNA 149
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
R V +G L+KPD+C L+ +M CW P RP+F
Sbjct: 244 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 280
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 84/143 (58%), Gaps = 4/143 (2%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D+WEV R+ I + LG+G FG V++ A G+ E VA+KT+ E A RER++ L
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E +VMK + H +VVRLLG ++ +P VIME + G L+S+LRS R + NN
Sbjct: 63 EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE-MENNPVLAPP 120
Query: 132 SLTSRDLTSFCYQVARGMQFLSS 154
SL+ + ++A GM +L++
Sbjct: 121 SLSK--MIQMAGEIADGMAYLNA 141
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
R V +G L+KPD+C L +M CW P RP+F
Sbjct: 236 RFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSF 272
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 84/143 (58%), Gaps = 4/143 (2%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D+WEV R+ I + LG+G FG V++ A G+ E VA+KT+ E A RER++ L
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E +VMK + H +VVRLLG ++ +P VIME + G L+S+LRS R + NN
Sbjct: 71 EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE-MENNPVLAPP 128
Query: 132 SLTSRDLTSFCYQVARGMQFLSS 154
SL+ + ++A GM +L++
Sbjct: 129 SLSK--MIQMAGEIADGMAYLNA 149
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
R V +G L+KPD+C L+ +M CW P RP+F
Sbjct: 244 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 280
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 84/143 (58%), Gaps = 4/143 (2%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D+WEV R+ I + LG+G FG V++ A G+ E VA+KT+ E A RER++ L
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E +VMK + H +VVRLLG ++ +P VIME + G L+S+LRS R + NN
Sbjct: 65 EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE-MENNPVLAPP 122
Query: 132 SLTSRDLTSFCYQVARGMQFLSS 154
SL+ + ++A GM +L++
Sbjct: 123 SLSK--MIQMAGEIADGMAYLNA 143
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
R V +G L+KPD+C L +M CW P RP+F
Sbjct: 238 RFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSF 274
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 84/143 (58%), Gaps = 4/143 (2%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D+WEV R+ I + LG+G FG V++ A G+ E VA+KT+ E A RER++ L
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E +VMK + H +VVRLLG ++ +P VIME + G L+S+LRS R + NN
Sbjct: 78 EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE-MENNPVLAPP 135
Query: 132 SLTSRDLTSFCYQVARGMQFLSS 154
SL+ + ++A GM +L++
Sbjct: 136 SLSK--MIQMAGEIADGMAYLNA 156
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
R V +G L+KPD+C L+ +M CW P RP+F
Sbjct: 251 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 287
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 84/143 (58%), Gaps = 4/143 (2%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D+WEV R+ I + LG+G FG V++ A G+ E VA+KT+ E A RER++ L
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E +VMK + H +VVRLLG ++ +P VIME + G L+S+LRS R + NN
Sbjct: 72 EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE-MENNPVLAPP 129
Query: 132 SLTSRDLTSFCYQVARGMQFLSS 154
SL+ + ++A GM +L++
Sbjct: 130 SLSK--MIQMAGEIADGMAYLNA 150
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
R V +G L+KPD+C L+ +M CW P RP+F
Sbjct: 245 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 281
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 84/143 (58%), Gaps = 4/143 (2%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D+WEV R+ I + LG+G FG V++ A G+ E VA+KT+ E A RER++ L
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E +VMK + H +VVRLLG ++ +P VIME + G L+S+LRS R + NN
Sbjct: 72 EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE-MENNPVLAPP 129
Query: 132 SLTSRDLTSFCYQVARGMQFLSS 154
SL+ + ++A GM +L++
Sbjct: 130 SLSK--MIQMAGEIADGMAYLNA 150
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
R V +G L+KPD+C L+ +M CW P RP+F
Sbjct: 245 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 281
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 84/143 (58%), Gaps = 4/143 (2%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D+WEV R+ I + LG+G FG V++ A G+ E VA+KT+ E A RER++ L
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 99
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E +VMK + H +VVRLLG ++ +P VIME + G L+S+LRS R + NN
Sbjct: 100 EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE-MENNPVLAPP 157
Query: 132 SLTSRDLTSFCYQVARGMQFLSS 154
SL+ + ++A GM +L++
Sbjct: 158 SLSK--MIQMAGEIADGMAYLNA 178
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
R V +G L+KPD+C L+ +M CW P RP+F
Sbjct: 273 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 309
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 84/143 (58%), Gaps = 4/143 (2%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D+WEV R+ I + LG+G FG V++ A G+ E VA+KT+ E A RER++ L
Sbjct: 9 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 68
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E +VMK + H +VVRLLG ++ +P VIME + G L+S+LRS R + NN
Sbjct: 69 EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE-MENNPVLAPP 126
Query: 132 SLTSRDLTSFCYQVARGMQFLSS 154
SL+ + ++A GM +L++
Sbjct: 127 SLSK--MIQMAGEIADGMAYLNA 147
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
R V +G L+KPD+C L+ +M CW P RP+F
Sbjct: 242 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 278
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 84/143 (58%), Gaps = 4/143 (2%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D+WEV R+ I + LG+G FG V++ A G+ E VA+KT+ E A RER++ L
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E +VMK + H +VVRLLG ++ +P VIME + G L+S+LRS R + NN
Sbjct: 65 EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE-MENNPVLAPP 122
Query: 132 SLTSRDLTSFCYQVARGMQFLSS 154
SL+ + ++A GM +L++
Sbjct: 123 SLSK--MIQMAGEIADGMAYLNA 143
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
R V +G L+KPD+C L+ +M CW P RP+F
Sbjct: 238 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 274
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 83/143 (58%), Gaps = 4/143 (2%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D+WEV R+ I + LG+G FG V++ A G+ E VA+KT+ E A RER++ L
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E +VMK + H +VVRLLG ++ +P VIME + G L+S+LRS R NN
Sbjct: 78 EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPA-MANNPVLAPP 135
Query: 132 SLTSRDLTSFCYQVARGMQFLSS 154
SL+ + ++A GM +L++
Sbjct: 136 SLSK--MIQMAGEIADGMAYLNA 156
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
R V +G L+KPD+C L+ +M CW P RP+F
Sbjct: 251 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 287
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 83/143 (58%), Gaps = 4/143 (2%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D+WEV R+ I + LG+G FG V++ A G+ E VA+KT+ E A RER++ L
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 67
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E +VMK + H +VVRLLG ++ +P VIME + G L+S+LRS R NN
Sbjct: 68 EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPA-MANNPVLAPP 125
Query: 132 SLTSRDLTSFCYQVARGMQFLSS 154
SL+ + ++A GM +L++
Sbjct: 126 SLSK--MIQMAGEIADGMAYLNA 146
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
R V +G L+KPD+C L+ +M CW P RP+F
Sbjct: 241 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 277
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 89/198 (44%), Gaps = 55/198 (27%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
KWE R+ +K+ LG G FG+V + A GI VAVK LKE A E L+ E
Sbjct: 21 KWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTE 80
Query: 73 LTVMKTLDPHPNVVRLLGCCTEK-EPFFVIMEYVPYGKLQSFLRSSRAQRYYNN---MH- 127
L ++ + H NVV LLG CT++ P VI+EY YG L ++L+S R + N +H
Sbjct: 81 LKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHM 140
Query: 128 -------------GKS---NSLTS----------------------------------RD 137
GK +S+TS D
Sbjct: 141 EPKKEKMEPGLEQGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMED 200
Query: 138 LTSFCYQVARGMQFLSSR 155
L S+ +QVARGM+FLSSR
Sbjct: 201 LISYSFQVARGMEFLSSR 218
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+R+G R+ P++ E+Y IM CW ++P ERP F
Sbjct: 315 LREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFA 350
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
KWE PR +K+ LG G FGQV + +A GID VAVK LKE A E L+ E
Sbjct: 14 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 73
Query: 73 LTVMKTLDPHPNVVRLLGCCTEK-EPFFVIMEYVPYGKLQSFLRSSR 118
L ++ + H NVV LLG CT+ P VI+E+ +G L ++LRS R
Sbjct: 74 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 120
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
R +++G R+ PD+ E+Y M CW EP++RP F+
Sbjct: 305 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 342
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
KWE PR +K+ LG G FGQV + +A GID VAVK LKE A E L+ E
Sbjct: 16 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 75
Query: 73 LTVMKTLDPHPNVVRLLGCCTEK-EPFFVIMEYVPYGKLQSFLRSSR 118
L ++ + H NVV LLG CT+ P VI+E+ +G L ++LRS R
Sbjct: 76 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 122
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
R +++G R+ PD+ E+Y M CW EP++RP F+
Sbjct: 307 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 344
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 83/141 (58%), Gaps = 4/141 (2%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELT 74
EV R+ I + LG+G FG V++ A I E VAVKT+ E+A RER++ L E +
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 71
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLT 134
VMK H +VVRLLG ++ +P V+ME + +G L+S+LRS R + N G+ T
Sbjct: 72 VMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEA--ENNPGRPPP-T 127
Query: 135 SRDLTSFCYQVARGMQFLSSR 155
+++ ++A GM +L+++
Sbjct: 128 LQEMIQMAAEIADGMAYLNAK 148
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 137 DLTSFCYQVARGM---QFLSSRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
++TS Q +G+ Q L + V DG L++PD+C + ++M CW P RP F
Sbjct: 223 EITSLAEQPYQGLSNEQVL--KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF 278
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
KWE PR +K+ LG G FGQV + +A GID VAVK LKE A E L+ E
Sbjct: 23 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 82
Query: 73 LTVMKTLDPHPNVVRLLGCCTEK-EPFFVIMEYVPYGKLQSFLRSSR 118
L ++ + H NVV LLG CT+ P VI+E+ +G L ++LRS R
Sbjct: 83 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 129
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
R +++G R+ PD+ E+Y M CW EP++RP F+
Sbjct: 314 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 351
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
KWE PR +K+ LG G FGQV + +A GID VAVK LKE A E L+ E
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 80
Query: 73 LTVMKTLDPHPNVVRLLGCCTEK-EPFFVIMEYVPYGKLQSFLRSSR 118
L ++ + H NVV LLG CT+ P VI+E+ +G L ++LRS R
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 127
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
R +++G R+ PD+ E+Y M CW EP++RP F+
Sbjct: 312 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 349
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 76/142 (53%), Gaps = 14/142 (9%)
Query: 21 IKVFDILGEGCFGQVWKC----EALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
IK D++GEG FGQV K + L +D A+K +KE A + + D EL V+
Sbjct: 27 IKFQDVIGEGNFGQVLKARIKKDGLRMDA-------AIKRMKEYASKDDHRDFAGELEVL 79
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQR---YYNNMHGKSNSL 133
L HPN++ LLG C + ++ +EY P+G L FLR SR + + +++L
Sbjct: 80 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 139
Query: 134 TSRDLTSFCYQVARGMQFLSSR 155
+S+ L F VARGM +LS +
Sbjct: 140 SSQQLLHFAADVARGMDYLSQK 161
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
GYRLEKP +C E+Y++M CW ++P ERP+F
Sbjct: 257 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFA 289
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 76/142 (53%), Gaps = 14/142 (9%)
Query: 21 IKVFDILGEGCFGQVWKC----EALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
IK D++GEG FGQV K + L +D A+K +KE A + + D EL V+
Sbjct: 24 IKFQDVIGEGNFGQVLKARIKKDGLRMDA-------AIKRMKEYASKDDHRDFAGELEVL 76
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQR---YYNNMHGKSNSL 133
L HPN++ LLG C + ++ +EY P+G L FLR SR + + +++L
Sbjct: 77 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 136
Query: 134 TSRDLTSFCYQVARGMQFLSSR 155
+S+ L F VARGM +LS +
Sbjct: 137 SSQQLLHFAADVARGMDYLSQK 158
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
GYRLEKP +C E+Y++M CW ++P ERP+F
Sbjct: 254 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFA 286
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 76/142 (53%), Gaps = 14/142 (9%)
Query: 21 IKVFDILGEGCFGQVWKC----EALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
IK D++GEG FGQV K + L +D A+K +KE A + + D EL V+
Sbjct: 17 IKFQDVIGEGNFGQVLKARIKKDGLRMDA-------AIKRMKEYASKDDHRDFAGELEVL 69
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQR---YYNNMHGKSNSL 133
L HPN++ LLG C + ++ +EY P+G L FLR SR + + +++L
Sbjct: 70 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 129
Query: 134 TSRDLTSFCYQVARGMQFLSSR 155
+S+ L F VARGM +LS +
Sbjct: 130 SSQQLLHFAADVARGMDYLSQK 151
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
GYRLEKP +C E+Y++M CW ++P ERP+F
Sbjct: 247 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFA 279
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 7/142 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D EVPR++I + LG G FG+V++ + G+ P VAVKTL E E++ LD L
Sbjct: 23 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 82
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E ++ L+ H N+VR +G + P F+++E + G L+SFLR +R + +
Sbjct: 83 MEALIISKLN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR------PSQP 135
Query: 131 NSLTSRDLTSFCYQVARGMQFL 152
+SL DL +A G Q+L
Sbjct: 136 SSLAMLDLLHVARDIACGCQYL 157
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
V G R++ P +C +Y IM CW +P +RPNF
Sbjct: 259 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 294
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 7/142 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D EVPR++I + LG G FG+V++ + G+ P VAVKTL E E++ LD L
Sbjct: 37 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 96
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E ++ L+ H N+VR +G + P F+++E + G L+SFLR +R + +
Sbjct: 97 MEALIISKLN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR------PSQP 149
Query: 131 NSLTSRDLTSFCYQVARGMQFL 152
+SL DL +A G Q+L
Sbjct: 150 SSLAMLDLLHVARDIACGCQYL 171
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
V G R++ P +C +Y IM CW +P +RPNF
Sbjct: 273 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 308
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D EVPR++I + LG G FG+V++ + G+ P VAVKTL E E++ LD L
Sbjct: 37 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 96
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E ++ + H N+VR +G + P F++ME + G L+SFLR +R + +
Sbjct: 97 MEALIISKFN-HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPR------PSQP 149
Query: 131 NSLTSRDLTSFCYQVARGMQFL 152
+SL DL +A G Q+L
Sbjct: 150 SSLAMLDLLHVARDIACGCQYL 171
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
V G R++ P +C +Y IM CW +P +RPNF
Sbjct: 273 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 308
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D EVPR++I + LG G FG+V++ + G+ P VAVKTL E E++ LD L
Sbjct: 22 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 81
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E ++ + H N+VR +G + P F++ME + G L+SFLR +R + +
Sbjct: 82 MEALIISKFN-HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPR------PSQP 134
Query: 131 NSLTSRDLTSFCYQVARGMQFL 152
+SL DL +A G Q+L
Sbjct: 135 SSLAMLDLLHVARDIACGCQYL 156
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
V G R++ P +C +Y IM CW +P +RPNF
Sbjct: 258 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 293
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D EVPR++I + LG G FG+V++ + G+ P VAVKTL E E++ LD L
Sbjct: 49 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 108
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E ++ + H N+VR +G + P F+++E + G L+SFLR +R + +
Sbjct: 109 MEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR------PSQP 161
Query: 131 NSLTSRDLTSFCYQVARGMQFL 152
+SL DL +A G Q+L
Sbjct: 162 SSLAMLDLLHVARDIACGCQYL 183
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
V G R++ P +C +Y IM CW +P +RPNF
Sbjct: 285 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 320
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D EVPR++I + LG G FG+V++ + G+ P VAVKTL E E++ LD L
Sbjct: 23 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 82
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E ++ + H N+VR +G + P F+++E + G L+SFLR +R + +
Sbjct: 83 MEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR------PSQP 135
Query: 131 NSLTSRDLTSFCYQVARGMQFL 152
+SL DL +A G Q+L
Sbjct: 136 SSLAMLDLLHVARDIACGCQYL 157
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
V G R++ P +C +Y IM CW +P +RPNF
Sbjct: 259 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 294
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D EVPR++I + LG G FG+V++ + G+ P VAVKTL E E++ LD L
Sbjct: 63 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 122
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E ++ + H N+VR +G + P F+++E + G L+SFLR +R + +
Sbjct: 123 MEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR------PSQP 175
Query: 131 NSLTSRDLTSFCYQVARGMQFL 152
+SL DL +A G Q+L
Sbjct: 176 SSLAMLDLLHVARDIACGCQYL 197
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
V G R++ P +C +Y IM CW +P +RPNF
Sbjct: 299 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 334
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D EVPR++I + LG G FG+V++ + G+ P VAVKTL E E++ LD L
Sbjct: 23 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 82
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E ++ + H N+VR +G + P F+++E + G L+SFLR +R + +
Sbjct: 83 MEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR------PSQP 135
Query: 131 NSLTSRDLTSFCYQVARGMQFL 152
+SL DL +A G Q+L
Sbjct: 136 SSLAMLDLLHVARDIACGCQYL 157
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
V G R++ P +C +Y IM CW +P +RPNF
Sbjct: 259 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 294
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D EVPR++I + LG G FG+V++ + G+ P VAVKTL E E++ LD L
Sbjct: 39 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 98
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E ++ + H N+VR +G + P F+++E + G L+SFLR +R + +
Sbjct: 99 MEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR------PSQP 151
Query: 131 NSLTSRDLTSFCYQVARGMQFL 152
+SL DL +A G Q+L
Sbjct: 152 SSLAMLDLLHVARDIACGCQYL 173
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
V G R++ P +C +Y IM CW +P +RPNF
Sbjct: 275 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 310
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D EVPR++I + LG G FG+V++ + G+ P VAVKTL E E++ LD L
Sbjct: 29 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 88
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E ++ + H N+VR +G + P F+++E + G L+SFLR +R + +
Sbjct: 89 MEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR------PSQP 141
Query: 131 NSLTSRDLTSFCYQVARGMQFL 152
+SL DL +A G Q+L
Sbjct: 142 SSLAMLDLLHVARDIACGCQYL 163
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
V G R++ P +C +Y IM CW +P +RPNF
Sbjct: 265 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 300
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D EVPR++I + LG G FG+V++ + G+ P VAVKTL E E++ LD L
Sbjct: 40 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 99
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E ++ + H N+VR +G + P F+++E + G L+SFLR +R + +
Sbjct: 100 MEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR------PSQP 152
Query: 131 NSLTSRDLTSFCYQVARGMQFL 152
+SL DL +A G Q+L
Sbjct: 153 SSLAMLDLLHVARDIACGCQYL 174
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
V G R++ P +C +Y IM CW +P +RPNF
Sbjct: 276 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 311
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D EVPR++I + LG G FG+V++ + G+ P VAVKTL E E++ LD L
Sbjct: 22 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 81
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E ++ + H N+VR +G + P F+++E + G L+SFLR +R + +
Sbjct: 82 MEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR------PSQP 134
Query: 131 NSLTSRDLTSFCYQVARGMQFL 152
+SL DL +A G Q+L
Sbjct: 135 SSLAMLDLLHVARDIACGCQYL 156
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
V G R++ P +C +Y IM CW +P +RPNF
Sbjct: 258 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 293
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D EVPR++I + LG G FG+V++ + G+ P VAVKTL E E++ LD L
Sbjct: 14 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 73
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E ++ + H N+VR +G + P F+++E + G L+SFLR +R + +
Sbjct: 74 MEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR------PSQP 126
Query: 131 NSLTSRDLTSFCYQVARGMQFL 152
+SL DL +A G Q+L
Sbjct: 127 SSLAMLDLLHVARDIACGCQYL 148
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
V G R++ P +C +Y IM CW +P +RPNF
Sbjct: 250 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 285
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELT 74
E PR +I+ +GEG FG+V++ A G+ E +VAVK LKE A + D +E
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNS-- 132
+M D +PN+V+LLG C +P ++ EY+ YG L FLRS + H ++
Sbjct: 103 LMAEFD-NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRA 161
Query: 133 ---------LTSRDLTSFCYQVARGMQFLSSR 155
L+ + QVA GM +LS R
Sbjct: 162 RVSSPGPPPLSCAEQLCIARQVAAGMAYLSER 193
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
VRDG L P++C ELYN+M CW K P +RP+F
Sbjct: 289 VRDGNILACPENCPLELYNLMRLCWSKLPADRPSF 323
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D EVPR++I + LG G FG+V++ + G+ P VAVKTL E E++ LD L
Sbjct: 37 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFL 96
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E ++ + H N+VR +G + P F+++E + G L+SFLR +R + +
Sbjct: 97 MEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR------PSQP 149
Query: 131 NSLTSRDLTSFCYQVARGMQFL 152
+SL DL +A G Q+L
Sbjct: 150 SSLAMLDLLHVARDIACGCQYL 171
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
V G R++ P +C +Y IM CW +P +RPNF
Sbjct: 273 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 308
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 19/147 (12%)
Query: 9 KSDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD 68
+S DKWE+ R I + LG G +G+V+ +G+ ++ VAVKTLKE+ E E +
Sbjct: 22 QSMDKWEMERTDITMKHKLGGGQYGEVY----VGV-WKKYSLTVAVKTLKEDTMEVE--E 74
Query: 69 LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHG 128
L+E VMK + HPN+V+LLG CT + PF+++ EY+PYG L +LR +
Sbjct: 75 FLKEAAVMKEIK-HPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREE------- 126
Query: 129 KSNSLTSRDLTSFCYQVARGMQFLSSR 155
+T+ L Q++ M++L +
Sbjct: 127 ----VTAVVLLYMATQISSAMEYLEKK 149
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 80/146 (54%), Gaps = 19/146 (13%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S DKWE+ R I + LG G FG+V++ G+ ++ VAVKTLKE+ E E +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQFGEVYE----GV-WKKYSLTVAVKTLKEDTMEVE--EF 54
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
L+E VMK + HPN+V+LLG CT + PF++I E++ YG L +LR Q
Sbjct: 55 LKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------- 105
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+++ L Q++ M++L +
Sbjct: 106 ---VSAVVLLYMATQISSAMEYLEKK 128
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 161 YRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
YR+E+P+ C ++Y +M CW P++RP+F
Sbjct: 227 YRMERPEGCPEKVYELMRACWQWNPSDRPSFA 258
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 81/146 (55%), Gaps = 19/146 (13%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S DKWE+ R I + LG G +G+V++ G+ ++ VAVKTLKE+ E E +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYE----GV-WKKYSLTVAVKTLKEDTMEVE--EF 54
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
L+E VMK + HPN+V+LLG CT + PF++I+E++ YG L +LR Q
Sbjct: 55 LKEAAVMKEIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE-------- 105
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+++ L Q++ M++L +
Sbjct: 106 ---VSAVVLLYMATQISSAMEYLEKK 128
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 161 YRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
YR+E+P+ C ++Y +M CW P++RP+F
Sbjct: 227 YRMERPEGCPEKVYELMRACWQWNPSDRPSFA 258
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 80/144 (55%), Gaps = 19/144 (13%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
DKWE+ R I + LG G +G+V++ G+ ++ VAVKTLKE+ E E + L+
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYE----GV-WKKYSLTVAVKTLKEDTMEVE--EFLK 58
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E VMK + HPN+V+LLG CT + PF++I+E++ YG L +LR Q
Sbjct: 59 EAAVMKEIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE---------- 107
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
+++ L Q++ M++L +
Sbjct: 108 -VSAVVLLYMATQISSAMEYLEKK 130
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 80/144 (55%), Gaps = 19/144 (13%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
DKWE+ R I + LG G +G+V++ G+ ++ VAVKTLKE+ E E + L+
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYE----GV-WKKYSLTVAVKTLKEDTMEVE--EFLK 58
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E VMK + HPN+V+LLG CT + PF++I+E++ YG L +LR Q
Sbjct: 59 EAAVMKEIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE---------- 107
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
+++ L Q++ M++L +
Sbjct: 108 -VSAVVLLYMATQISSAMEYLEKK 130
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 27/148 (18%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQV----WKCEALGIDGREGPCIVAVKTLKENAGERERL 67
DKWE+ R I + LG G +G+V WK +L VAVKTLKE+ E E
Sbjct: 213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEVE-- 261
Query: 68 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 127
+ L+E VMK + HPN+V+LLG CT + PF++I E++ YG L +LR Q
Sbjct: 262 EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE------ 314
Query: 128 GKSNSLTSRDLTSFCYQVARGMQFLSSR 155
+++ L Q++ M++L +
Sbjct: 315 -----VSAVVLLYMATQISSAMEYLEKK 337
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 19/144 (13%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
DKWE+ R I + LG G +G+V++ G+ ++ VAVKTLKE+ E E + L+
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYE----GV-WKKYSLTVAVKTLKEDTMEVE--EFLK 63
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E VMK + HPN+V+LLG CT + PF++I+E++ YG L +LR Q
Sbjct: 64 EAAVMKEIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE---------- 112
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
+ + L Q++ M++L +
Sbjct: 113 -VNAVVLLYMATQISSAMEYLEKK 135
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 76/148 (51%), Gaps = 27/148 (18%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQV----WKCEALGIDGREGPCIVAVKTLKENAGERERL 67
DKWE+ R I + LG G +G+V WK +L VAVKTLKE+ E E
Sbjct: 210 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEVE-- 258
Query: 68 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 127
+ L+E VMK + HPN+V+LLG CT + PF++I E++ YG L +LR Q
Sbjct: 259 EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE------ 311
Query: 128 GKSNSLTSRDLTSFCYQVARGMQFLSSR 155
+ + L Q++ M++L +
Sbjct: 312 -----VNAVVLLYMATQISSAMEYLEKK 334
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 19/144 (13%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
DKWE+ R I + LG G +G+V++ G+ ++ VAVKTLKE+ E E + L+
Sbjct: 7 DKWEMERTDITMKHKLGGGQYGEVYE----GV-WKKYSLTVAVKTLKEDTMEVE--EFLK 59
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E VMK + HPN+V+LLG CT + PF++I+E++ YG L +LR Q
Sbjct: 60 EAAVMKEIK-HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE---------- 108
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
+ + L Q++ M++L +
Sbjct: 109 -VNAVVLLYMATQISSAMEYLEKK 131
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 161 YRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
YR+E+P+ C ++Y +M CW P++RP+F
Sbjct: 230 YRMERPEGCPEKVYELMRACWQWNPSDRPSFA 261
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 19/144 (13%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
DKWE+ R I + LG G +G+V++ G+ ++ VAVKTLKE+ E E + L+
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYE----GV-WKKYSLTVAVKTLKEDTMEVE--EFLK 58
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E VMK + HPN+V+LLG CT + PF++I E++ YG L +LR Q
Sbjct: 59 EAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE---------- 107
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
+++ L Q++ M++L +
Sbjct: 108 -VSAVVLLYMATQISSAMEYLEKK 130
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 19/144 (13%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
DKWE+ R I + LG G +G+V++ G+ ++ VAVKTLKE+ E E + L+
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYE----GV-WKKYSLTVAVKTLKEDTMEVE--EFLK 63
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E VMK + HPN+V+LLG CT + PF++I E++ YG L +LR Q
Sbjct: 64 EAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE---------- 112
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
+++ L Q++ M++L +
Sbjct: 113 -VSAVVLLYMATQISSAMEYLEKK 135
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 80/146 (54%), Gaps = 19/146 (13%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S DKWE+ R I + LG G +G+V++ G+ ++ VAVKTLKE+ E E +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYE----GV-WKKYSLTVAVKTLKEDTMEVE--EF 54
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
L+E VMK + HPN+V+LLG CT + PF++I E++ YG L +LR Q
Sbjct: 55 LKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------- 105
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+++ L Q++ M++L +
Sbjct: 106 ---VSAVVLLYMATQISSAMEYLEKK 128
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 161 YRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
YR+E+P+ C ++Y +M CW P++RP+F
Sbjct: 227 YRMERPEGCPEKVYELMRACWQWNPSDRPSFA 258
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 19/144 (13%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
DKWE+ R I + LG G +G+V++ G+ ++ VAVKTLKE+ E E + L+
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYE----GV-WKKYSLTVAVKTLKEDTMEVE--EFLK 58
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E VMK + HPN+V+LLG CT + PF++I E++ YG L +LR Q
Sbjct: 59 EAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE---------- 107
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
+++ L Q++ M++L +
Sbjct: 108 -VSAVVLLYMATQISSAMEYLEKK 130
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 76/148 (51%), Gaps = 27/148 (18%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQV----WKCEALGIDGREGPCIVAVKTLKENAGERERL 67
DKWE+ R I + LG G +G+V WK +L VAVKTLKE+ E E
Sbjct: 252 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEVE-- 300
Query: 68 DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 127
+ L+E VMK + HPN+V+LLG CT + PF++I E++ YG L +LR Q
Sbjct: 301 EFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE------ 353
Query: 128 GKSNSLTSRDLTSFCYQVARGMQFLSSR 155
+ + L Q++ M++L +
Sbjct: 354 -----VNAVVLLYMATQISSAMEYLEKK 376
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 19/144 (13%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
DKWE+ R I + LG G +G+V++ G+ ++ VAVKTLKE+ E E + L+
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYE----GV-WKKYSLTVAVKTLKEDTMEVE--EFLK 63
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E VMK + HPN+V+LLG CT + PF++I E++ YG L +LR Q
Sbjct: 64 EAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE---------- 112
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
+ + L Q++ M++L +
Sbjct: 113 -VNAVVLLYMATQISSAMEYLEKK 135
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 19/144 (13%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
DKWE+ R I + LG G +G+V++ G+ ++ VAVKTLKE+ E E + L+
Sbjct: 19 DKWEMERTDITMKHKLGGGQYGEVYE----GV-WKKYSLTVAVKTLKEDTMEVE--EFLK 71
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E VMK + HPN+V+LLG CT + PF++I E++ YG L +LR Q
Sbjct: 72 EAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE---------- 120
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
+ + L Q++ M++L +
Sbjct: 121 -VNAVVLLYMATQISSAMEYLEKK 143
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 19/144 (13%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
DKWE+ R I + LG G +G+V++ G+ ++ VAVKTLKE+ E E + L+
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYE----GV-WKKYSLTVAVKTLKEDTMEVE--EFLK 60
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E VMK + HPN+V+LLG CT + PF++I E++ YG L +LR Q
Sbjct: 61 EAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE---------- 109
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
+ + L Q++ M++L +
Sbjct: 110 -VNAVVLLYMATQISSAMEYLEKK 132
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 19/144 (13%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
DKWE+ R I + LG G +G+V++ G+ ++ VAVKTLKE+ E E + L+
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYE----GV-WKKYSLTVAVKTLKEDTMEVE--EFLK 60
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E VMK + HPN+V+LLG CT + PF++I E++ YG L +LR Q
Sbjct: 61 EAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE---------- 109
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
+ + L Q++ M++L +
Sbjct: 110 -VNAVVLLYMATQISSAMEYLEKK 132
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 19/144 (13%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
DKWE+ R I + LG G +G+V++ G+ ++ VAVKTLKE+ E E + L+
Sbjct: 10 DKWEMERTDITMKHKLGGGQYGEVYE----GV-WKKYSLTVAVKTLKEDTMEVE--EFLK 62
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E VMK + HPN+V+LLG CT + PF++I E++ YG L +LR Q
Sbjct: 63 EAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE---------- 111
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
+ + L Q++ M++L +
Sbjct: 112 -VNAVVLLYMATQISSAMEYLEKK 134
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 19/144 (13%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
DKWE+ R I + LG G +G+V++ G+ ++ VAVKTLKE+ E E + L+
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYE----GV-WKKYSLTVAVKTLKEDTMEVE--EFLK 60
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E VMK + HPN+V+LLG CT + PF++I E++ YG L +LR Q
Sbjct: 61 EAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE---------- 109
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
+ + L Q++ M++L +
Sbjct: 110 -VNAVVLLYMATQISSAMEYLEKK 132
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 19/144 (13%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
DKWE+ R I + LG G +G+V++ G+ ++ VAVKTLKE+ E E + L+
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYE----GV-WKKYSLTVAVKTLKEDTMEVE--EFLK 63
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E VMK + HPN+V+LLG CT + PF++I E++ YG L +LR Q
Sbjct: 64 EAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE---------- 112
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
+ + L Q++ M++L +
Sbjct: 113 -VNAVVLLYMATQISSAMEYLEKK 135
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 161 YRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
YR+E+P+ C ++Y +M CW P++RP+F
Sbjct: 234 YRMERPEGCPEKVYELMRACWQWNPSDRPSFA 265
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 19/144 (13%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
DKWE+ R I + LG G +G+V++ G+ ++ VAVKTLKE+ E E + L+
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYE----GV-WKKYSLTVAVKTLKEDTMEVE--EFLK 58
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E VMK + HPN+V+LLG CT + PF++I E++ YG L +LR Q
Sbjct: 59 EAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE---------- 107
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
+ + L Q++ M++L +
Sbjct: 108 -VNAVVLLYMATQISSAMEYLEKK 130
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 19/144 (13%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
DKWE+ R I + LG G +G+V++ G+ ++ VAVKTLKE+ E E + L+
Sbjct: 7 DKWEMERTDITMKHKLGGGQYGEVYE----GV-WKKYSLTVAVKTLKEDTMEVE--EFLK 59
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E VMK + HPN+V+LLG CT + PF++I E++ YG L +LR Q
Sbjct: 60 EAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE---------- 108
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
+ + L Q++ M++L +
Sbjct: 109 -VNAVVLLYMATQISSAMEYLEKK 131
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 19/144 (13%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
DKWE+ R I + LG G +G+V++ G+ ++ VAVKTLKE+ E E + L+
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYE----GV-WKKYSLTVAVKTLKEDTMEVE--EFLK 63
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E VMK + HPN+V+LLG CT + PF++I E++ YG L +LR Q
Sbjct: 64 EAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE---------- 112
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
+ + L Q++ M++L +
Sbjct: 113 -VNAVVLLYMATQISSAMEYLEKK 135
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 19/144 (13%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
DKWE+ R I + LG G +G+V++ G+ ++ VAVKTLKE+ E E + L+
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYE----GV-WKKYSLTVAVKTLKEDTMEVE--EFLK 58
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E VMK + HPN+V+LLG CT + PF++I E++ YG L +LR Q
Sbjct: 59 EAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE---------- 107
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
+ + L Q++ M++L +
Sbjct: 108 -VNAVVLLYMATQISSAMEYLEKK 130
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D WE+PR+ IK+ LG G FG+VW + VAVKTLK G L+
Sbjct: 6 DAWEIPRESIKLVKRLGAGQFGEVW------MGYYNNSTKVAVKTLK--PGTMSVQAFLE 57
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E +MKTL H +VRL T +EP ++I EY+ G L FL+S +
Sbjct: 58 EANLMKTLQ-HDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGK---------- 106
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
+ L F Q+A GM ++ +
Sbjct: 107 -VLLPKLIDFSAQIAEGMAYIERK 129
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 156 GVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ GYR+ + ++C ELY+IM CW ++ ERP F
Sbjct: 223 ALSQGYRMPRVENCPDELYDIMKMCWKEKAEERPTF 258
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 7/142 (4%)
Query: 19 QHIKVFDI-----LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
QHIK +I LGEG FG+V+ E + + +VAVKTLK+ A + R D +E
Sbjct: 8 QHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD-ASDNARKDFHREA 66
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSL 133
++ L H ++V+ G C E +P ++ EY+ +G L FLR+ L
Sbjct: 67 ELLTNLQ-HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTEL 125
Query: 134 TSRDLTSFCYQVARGMQFLSSR 155
T + Q+A GM +L+S+
Sbjct: 126 TQSQMLHIAQQIAAGMVYLASQ 147
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ G L++P C +E+Y +M CW +EP+ R N
Sbjct: 243 ITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNI 277
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELT 74
E+ +I + ++G G FG+V C + VA+KTLK E++R D L E +
Sbjct: 39 ELDATNISIDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 96
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLT 134
+M D HPN++RL G T+ +P ++ EY+ G L SFLR AQ T
Sbjct: 97 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------------FT 143
Query: 135 SRDLTSFCYQVARGMQFLSSRG 156
L +A GM++LS G
Sbjct: 144 VIQLVGMLRGIASGMKYLSDMG 165
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ V +GYRL P C LY +M CW K+ N RP F
Sbjct: 259 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKF 295
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
D WE+PR+ IK+ LG G FG+VW + VAVKTLK G L
Sbjct: 4 DPAWEIPRESIKLVKKLGAGQFGEVW------MGYYNNSTKVAVKTLK--PGTMSVQAFL 55
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
+E +MKTL H +VRL T++EP ++I E++ G L FL+S +
Sbjct: 56 EEANLMKTLQ-HDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGK--------- 105
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSR 155
+ L F Q+A GM ++ +
Sbjct: 106 --VLLPKLIDFSAQIAEGMAYIERK 128
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 156 GVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ GYR+ + ++C ELY+IM CW ++ ERP F
Sbjct: 222 ALSQGYRMPRMENCPDELYDIMKMCWKEKAEERPTF 257
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELT 74
E+ +I + ++G G FG+V C + VA+KTLK E++R D L E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLT 134
+M D HPN++RL G T+ +P ++ EY+ G L SFLR AQ T
Sbjct: 99 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------------FT 145
Query: 135 SRDLTSFCYQVARGMQFLSSRG 156
L +A GM++LS G
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMG 167
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ V +GYRL P C LY +M CW K+ N RP F
Sbjct: 261 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKF 297
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELT 74
E+ +I + ++G G FG+V C + VA+KTLK E++R D L E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLT 134
+M D HPN++RL G T+ +P ++ EY+ G L SFLR AQ T
Sbjct: 99 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------------FT 145
Query: 135 SRDLTSFCYQVARGMQFLSSRG 156
L +A GM++LS G
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMG 167
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ V +GYRL P C LY +M CW K+ N RP F
Sbjct: 261 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKF 297
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELT 74
E+ +I + ++G G FG+V C + VA+KTLK E++R D L E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLT 134
+M D HPN++RL G T+ +P ++ EY+ G L SFLR AQ T
Sbjct: 99 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------------FT 145
Query: 135 SRDLTSFCYQVARGMQFLSSRG 156
L +A GM++LS G
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMG 167
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ V +GYRL P C LY +M CW K+ N RP F
Sbjct: 261 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKF 297
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELT 74
E+ +I + ++G G FG+V C + VA+KTLK E++R D L E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLT 134
+M D HPN++RL G T+ +P ++ EY+ G L SFLR AQ T
Sbjct: 99 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------------FT 145
Query: 135 SRDLTSFCYQVARGMQFLSSRG 156
L +A GM++LS G
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMG 167
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ V +GYRL P C LY +M CW K+ N RP F
Sbjct: 261 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKF 297
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELT 74
E+ +I + ++G G FG+V C + VA+KTLK E++R D L E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLT 134
+M D HPN++RL G T+ +P ++ EY+ G L SFLR AQ T
Sbjct: 99 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------------FT 145
Query: 135 SRDLTSFCYQVARGMQFLSSRG 156
L +A GM++LS G
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMG 167
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ V +GYRL P C LY +M CW K+ N RP F
Sbjct: 261 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKF 297
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELT 74
E+ +I + ++G G FG+V C + VA+KTLK E++R D L E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLT 134
+M D HPN++RL G T+ +P ++ EY+ G L SFLR AQ T
Sbjct: 99 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------------FT 145
Query: 135 SRDLTSFCYQVARGMQFLSSRG 156
L +A GM++LS G
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMG 167
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ V +GYRL P C LY +M CW K+ N RP F
Sbjct: 261 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKF 297
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELT 74
E+ +I + ++G G FG+V C + VA+KTLK E++R D L E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLT 134
+M D HPN++RL G T+ +P ++ EY+ G L SFLR AQ T
Sbjct: 99 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------------FT 145
Query: 135 SRDLTSFCYQVARGMQFLSSRG 156
L +A GM++LS G
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMG 167
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ V +GYRL P C LY +M CW K+ N RP F
Sbjct: 261 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKF 297
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELT 74
E+ +I + ++G G FG+V C + VA+KTLK E++R D L E +
Sbjct: 12 ELDATNISIDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 69
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLT 134
+M D HPN++RL G T+ +P ++ EY+ G L SFLR AQ T
Sbjct: 70 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------------FT 116
Query: 135 SRDLTSFCYQVARGMQFLSSRG 156
L +A GM++LS G
Sbjct: 117 VIQLVGMLRGIASGMKYLSDMG 138
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ V +GYRL P C LY +M CW K+ N RP F
Sbjct: 232 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKF 268
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELT 74
E+ +I + ++G G FG+V C + VA+KTLK E++R D L E +
Sbjct: 29 ELDATNISIDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 86
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLT 134
+M D HPN++RL G T+ +P ++ EY+ G L SFLR AQ T
Sbjct: 87 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------------FT 133
Query: 135 SRDLTSFCYQVARGMQFLSSRG 156
L +A GM++LS G
Sbjct: 134 VIQLVGMLRGIASGMKYLSDMG 155
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ V +GYRL P C LY +M CW K+ N RP F
Sbjct: 249 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKF 285
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 21/145 (14%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
+D+WEVPR+ +K+ + LG G FG+VW + G VAVK+LK+ G L
Sbjct: 7 EDEWEVPRETLKLVERLGAGQFGEVW------MGYYNGHTKVAVKSLKQ--GSMSPDAFL 58
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E +MK L H +VRL T+ EP ++I EY+ G L FL++ +
Sbjct: 59 AEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK--------- 107
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSR 155
LT L Q+A GM F+ R
Sbjct: 108 --LTINKLLDMAAQIAEGMAFIEER 130
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
GYR+ +PD+C ELY +M CW + P +RP F
Sbjct: 228 GYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 259
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 21/145 (14%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
+D+WEVPR+ +K+ + LG G FG+VW + G VAVK+LK+ G L
Sbjct: 5 EDEWEVPRETLKLVERLGAGQFGEVW------MGYYNGHTKVAVKSLKQ--GSMSPDAFL 56
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E +MK L H +VRL T+ EP ++I EY+ G L FL++ +
Sbjct: 57 AEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK--------- 105
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSR 155
LT L Q+A GM F+ R
Sbjct: 106 --LTINKLLDMAAQIAEGMAFIEER 128
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
GYR+ +PD+C ELY +M CW + P +RP F
Sbjct: 226 GYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 257
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 21/145 (14%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
+D+WEVPR+ +K+ + LG G FG+VW + G VAVK+LK+ G L
Sbjct: 10 EDEWEVPRETLKLVERLGAGQFGEVW------MGYYNGHTKVAVKSLKQ--GSMSPDAFL 61
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E +MK L H +VRL T+ EP ++I EY+ G L FL++ +
Sbjct: 62 AEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK--------- 110
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSR 155
LT L Q+A GM F+ R
Sbjct: 111 --LTINKLLDMAAQIAEGMAFIEER 133
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
GYR+ +PD+C ELY +M CW + P +RP F
Sbjct: 231 GYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 262
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 21/145 (14%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
+D+WEVPR+ +K+ + LG G FG+VW + G VAVK+LK+ G L
Sbjct: 11 EDEWEVPRETLKLVERLGAGQFGEVW------MGYYNGHTKVAVKSLKQ--GSMSPDAFL 62
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E +MK L H +VRL T+ EP ++I EY+ G L FL++ +
Sbjct: 63 AEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK--------- 111
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSR 155
LT L Q+A GM F+ R
Sbjct: 112 --LTINKLLDMAAQIAEGMAFIEER 134
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
GYR+ +PD+C ELY +M CW + P +RP F
Sbjct: 232 GYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 263
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 21/145 (14%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
+D+WEVPR+ +K+ + LG G FG+VW + G VAVK+LK+ G L
Sbjct: 15 EDEWEVPRETLKLVERLGAGQFGEVW------MGYYNGHTKVAVKSLKQ--GSMSPDAFL 66
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E +MK L H +VRL T+ EP ++I EY+ G L FL++ +
Sbjct: 67 AEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK--------- 115
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSR 155
LT L Q+A GM F+ R
Sbjct: 116 --LTINKLLDMAAQIAEGMAFIEER 138
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
GYR+ +PD+C ELY +M CW + P +RP F
Sbjct: 236 GYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 267
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 21/145 (14%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
+D+WEVPR+ +K+ + LG G FG+VW + G VAVK+LK+ G L
Sbjct: 5 EDEWEVPRETLKLVERLGAGQFGEVW------MGYYNGHTKVAVKSLKQ--GSMSPDAFL 56
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E +MK L H +VRL T+ EP ++I EY+ G L FL++ +
Sbjct: 57 AEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK--------- 105
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSR 155
LT L Q+A GM F+ R
Sbjct: 106 --LTINKLLDMAAQIAEGMAFIEER 128
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
GYR+ +PD+C ELY +M CW + P +RP F
Sbjct: 226 GYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 257
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 21/145 (14%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
+D+WEVPR+ +K+ + LG G FG+VW + G VAVK+LK+ G L
Sbjct: 11 EDEWEVPRETLKLVERLGAGQFGEVW------MGYYNGHTKVAVKSLKQ--GSMSPDAFL 62
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E +MK L H +VRL T+ EP ++I EY+ G L FL++ +
Sbjct: 63 AEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK--------- 111
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSR 155
LT L Q+A GM F+ R
Sbjct: 112 --LTINKLLDMAAQIAEGMAFIEER 134
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
GYR+ +PD+C ELY +M CW + P +RP F
Sbjct: 232 GYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 263
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 21/145 (14%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
+D+WEVPR+ +K+ + LG G FG+VW + G VAVK+LK+ G L
Sbjct: 13 EDEWEVPRETLKLVERLGAGQFGEVW------MGYYNGHTKVAVKSLKQ--GSMSPDAFL 64
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E +MK L H +VRL T+ EP ++I EY+ G L FL++ +
Sbjct: 65 AEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK--------- 113
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSR 155
LT L Q+A GM F+ R
Sbjct: 114 --LTINKLLDMAAQIAEGMAFIEER 136
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
GYR+ +PD+C ELY +M CW + P +RP F
Sbjct: 234 GYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 265
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 21/145 (14%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
+D+WEVPR+ +K+ + LG G FG+VW + G VAVK+LK+ G L
Sbjct: 5 EDEWEVPRETLKLVERLGAGQFGEVW------MGYYNGHTKVAVKSLKQ--GSMSPDAFL 56
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E +MK L H +VRL T+ EP ++I EY+ G L FL++ +
Sbjct: 57 AEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK--------- 105
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSR 155
LT L Q+A GM F+ R
Sbjct: 106 --LTINKLLDMAAQIAEGMAFIEER 128
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
GYR+ +PD+C ELY +M CW + P +RP F
Sbjct: 226 GYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 257
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 21/145 (14%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
+D+WEVPR+ +K+ + LG G FG+VW + G VAVK+LK+ G L
Sbjct: 6 EDEWEVPRETLKLVERLGAGQFGEVW------MGYYNGHTKVAVKSLKQ--GSMSPDAFL 57
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E +MK L H +VRL T+ EP ++I EY+ G L FL++ +
Sbjct: 58 AEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK--------- 106
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSR 155
LT L Q+A GM F+ R
Sbjct: 107 --LTINKLLDMAAQIAEGMAFIEER 129
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
GYR+ +PD+C ELY +M CW + P +RP F
Sbjct: 227 GYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 258
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 21/145 (14%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
+D+WEVPR+ +K+ + LG G FG+VW + G VAVK+LK+ G L
Sbjct: 14 EDEWEVPRETLKLVERLGAGQFGEVW------MGYYNGHTKVAVKSLKQ--GSMSPDAFL 65
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E +MK L H +VRL T+ EP ++I EY+ G L FL++ +
Sbjct: 66 AEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK--------- 114
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSR 155
LT L Q+A GM F+ R
Sbjct: 115 --LTINKLLDMAAQIAEGMAFIEER 137
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
GYR+ +PD+C ELY +M CW + P +RP F
Sbjct: 235 GYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 266
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 70/144 (48%), Gaps = 21/144 (14%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D+WEVPR+ +K+ + LG G FG+VW + G VAVK+LK+ G L
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVW------MGYYNGHTKVAVKSLKQ--GSMSPDAFLA 52
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E +MK L H +VRL T+ EP ++I EY+ G L FL++ +
Sbjct: 53 EANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK---------- 100
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
LT L Q+A GM F+ R
Sbjct: 101 -LTINKLLDMAAQIAEGMAFIEER 123
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
GYR+ +PD+C ELY +M CW + P +RP F
Sbjct: 221 GYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 252
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 15/139 (10%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELT 74
E+ ++K+ +++G G FG+V + L G++ C VA+KTLK ER+R + L E +
Sbjct: 12 EIDVSYVKIEEVIGAGEFGEVCRGR-LKAPGKKESC-VAIKTLKGGYTERQRREFLSEAS 69
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLT 134
+M + HPN++RL G T P ++ E++ G L SFLR + Q T
Sbjct: 70 IMGQFE-HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ------------FT 116
Query: 135 SRDLTSFCYQVARGMQFLS 153
L +A GM++L+
Sbjct: 117 VIQLVGMLRGIASGMRYLA 135
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 156 GVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ YRL P C L+ +M CW K+ N RP F
Sbjct: 235 AIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRF 270
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 18/144 (12%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
DKW + + + + + +G G FG+V+ R +VAVK+ +E + LQ
Sbjct: 107 DKWVLNHEDLVLGEQIGRGNFGEVFSGRL-----RADNTLVAVKSCRETLPPDLKAKFLQ 161
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E ++K HPN+VRL+G CT+K+P +++ME V G +FLR+ A+
Sbjct: 162 EARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR----------- 209
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
L + L A GM++L S+
Sbjct: 210 -LRVKTLLQMVGDAAAGMEYLESK 232
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
V G RL P+ C ++ +M CW EP +RP+F+
Sbjct: 328 VEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFS 363
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 18/144 (12%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
DKW + + + + + +G G FG+V+ R +VAVK+ +E + LQ
Sbjct: 107 DKWVLNHEDLVLGEQIGRGNFGEVFSGRL-----RADNTLVAVKSCRETLPPDLKAKFLQ 161
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E ++K HPN+VRL+G CT+K+P +++ME V G +FLR+ A+
Sbjct: 162 EARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR----------- 209
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
L + L A GM++L S+
Sbjct: 210 -LRVKTLLQMVGDAAAGMEYLESK 232
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
V G RL P+ C ++ +M CW EP +RP+F+
Sbjct: 328 VEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFS 363
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Query: 19 QHIKVFDI-----LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
HIK DI LGEG FG+V+ E + + +VAVK LKE A E R D +E
Sbjct: 36 HHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE-ASESARQDFQREA 94
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSR--AQRYYNNMHGKSN 131
++ L H ++VR G CTE P ++ EY+ +G L FLRS A+
Sbjct: 95 ELLTMLQ-HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 153
Query: 132 SLTSRDLTSFCYQVARGMQFLSS 154
L L + QVA GM +L+
Sbjct: 154 PLGLGQLLAVASQVAAGMVYLAG 176
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNER 188
+ G LE+P C E+Y IM CW +EP +R
Sbjct: 273 ITQGRELERPRACPPEVYAIMRGCWQREPQQR 304
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 15/139 (10%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELT 74
E+ ++K+ +++G G FG+V + L G++ C VA+KTLK ER+R + L E +
Sbjct: 10 EIDVSYVKIEEVIGAGEFGEVCRGR-LKAPGKKESC-VAIKTLKGGYTERQRREFLSEAS 67
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLT 134
+M + HPN++RL G T P ++ E++ G L SFLR + Q T
Sbjct: 68 IMGQFE-HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ------------FT 114
Query: 135 SRDLTSFCYQVARGMQFLS 153
L +A GM++L+
Sbjct: 115 VIQLVGMLRGIASGMRYLA 133
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 156 GVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ YRL P C L+ +M CW K+ N RP F
Sbjct: 233 AIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRF 268
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Query: 19 QHIKVFDI-----LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
HIK DI LGEG FG+V+ E + + +VAVK LKE A E R D +E
Sbjct: 13 HHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE-ASESARQDFQREA 71
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSS--RAQRYYNNMHGKSN 131
++ L H ++VR G CTE P ++ EY+ +G L FLRS A+
Sbjct: 72 ELLTMLQ-HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 130
Query: 132 SLTSRDLTSFCYQVARGMQFLSS 154
L L + QVA GM +L+
Sbjct: 131 PLGLGQLLAVASQVAAGMVYLAG 153
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNER 188
+ G LE+P C E+Y IM CW +EP +R
Sbjct: 250 ITQGRELERPRACPPEVYAIMRGCWQREPQQR 281
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Query: 19 QHIKVFDI-----LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
HIK DI LGEG FG+V+ E + + +VAVK LKE A E R D +E
Sbjct: 7 HHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE-ASESARQDFQREA 65
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSS--RAQRYYNNMHGKSN 131
++ L H ++VR G CTE P ++ EY+ +G L FLRS A+
Sbjct: 66 ELLTMLQ-HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 124
Query: 132 SLTSRDLTSFCYQVARGMQFLSS 154
L L + QVA GM +L+
Sbjct: 125 PLGLGQLLAVASQVAAGMVYLAG 147
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNER 188
+ G LE+P C E+Y IM CW +EP +R
Sbjct: 244 ITQGRELERPRACPPEVYAIMRGCWQREPQQR 275
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 17/134 (12%)
Query: 21 IKVFDILGEGCFGQVWKCEA-LGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTL 79
+K+ ++G G FG+V C L + G+ VA+KTLK E++R D L E ++M
Sbjct: 35 VKIEQVIGAGEFGEV--CSGHLKLPGKR-EIFVAIKTLKSGYTEKQRRDFLSEASIMGQF 91
Query: 80 DPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLT 139
D HPNV+ L G T+ P +I E++ G L SFLR + Q T L
Sbjct: 92 D-HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ------------FTVIQLV 138
Query: 140 SFCYQVARGMQFLS 153
+A GM++L+
Sbjct: 139 GMLRGIAAGMKYLA 152
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 156 GVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ YRL P C L+ +M CW K+ N RP F
Sbjct: 252 AIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKF 287
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 15/142 (10%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELT 74
E+ +I + ++G G FG+V C + VA+KTLK E++R D L E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLT 134
+M D HPN++RL G T+ +P ++ E + G L SFLR AQ T
Sbjct: 99 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ------------FT 145
Query: 135 SRDLTSFCYQVARGMQFLSSRG 156
L +A GM++LS G
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMG 167
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ V +GYRL P C LY +M CW K+ N RP F
Sbjct: 261 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKF 297
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 68/144 (47%), Gaps = 21/144 (14%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D WE+PR+ +K+ LG G FG+VW + VAVKT+K + E L
Sbjct: 8 DAWEIPRESLKLEKKLGAGQFGEVW------MATYNKHTKVAVKTMKPGSMSVEA--FLA 59
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E VMKTL H +V+L T KEP ++I E++ G L FL+S G
Sbjct: 60 EANVMKTLQ-HDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSD---------EGSKQ 108
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
L L F Q+A GM F+ R
Sbjct: 109 PLPK--LIDFSAQIAEGMAFIEQR 130
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
R + GYR+ +P++C ELYNIM CW P ERP F
Sbjct: 223 RALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTF 259
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 68/144 (47%), Gaps = 21/144 (14%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D WE+PR+ +K+ LG G FG+VW + VAVKT+K + E L
Sbjct: 175 DAWEIPRESLKLEKKLGAGQFGEVW------MATYNKHTKVAVKTMKPGSMSVEA--FLA 226
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E VMKTL H +V+L T KEP ++I E++ G L FL+S G
Sbjct: 227 EANVMKTLQ-HDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSD---------EGSKQ 275
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
L L F Q+A GM F+ R
Sbjct: 276 PLPK--LIDFSAQIAEGMAFIEQR 297
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
R + GYR+ +P++C ELYNIM CW P ERP F
Sbjct: 380 RALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTF 416
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 17/140 (12%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEA-LGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
E+ +K+ ++G G FG+V C L + G+ VA+KTLK E++R D L E
Sbjct: 3 EIDISCVKIEQVIGAGEFGEV--CSGHLKLPGKR-EIFVAIKTLKSGYTEKQRRDFLSEA 59
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSL 133
++M D HPNV+ L G T+ P +I E++ G L SFLR + Q
Sbjct: 60 SIMGQFD-HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ------------F 106
Query: 134 TSRDLTSFCYQVARGMQFLS 153
T L +A GM++L+
Sbjct: 107 TVIQLVGMLRGIAAGMKYLA 126
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 156 GVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ YRL P C L+ +M CW K+ N RP F
Sbjct: 226 AIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKF 261
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 15/143 (10%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELT 74
E+ +I + ++G G FG+V C + VA+KTLK E++R D L E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLT 134
+M D HPN++RL G T+ +P ++ E + G L SFLR AQ T
Sbjct: 99 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ------------FT 145
Query: 135 SRDLTSFCYQVARGMQFLSSRGV 157
L +A GM++LS G
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGA 168
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ V +GYRL P C LY +M CW K+ N RP F
Sbjct: 261 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKF 297
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 68/144 (47%), Gaps = 21/144 (14%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D WE+PR+ +K+ LG G FG+VW + VAVKT+K + E L
Sbjct: 181 DAWEIPRESLKLEKKLGAGQFGEVW------MATYNKHTKVAVKTMKPGSMSVEA--FLA 232
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E VMKTL H +V+L T KEP ++I E++ G L FL+S G
Sbjct: 233 EANVMKTLQ-HDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSD---------EGSKQ 281
Query: 132 SLTSRDLTSFCYQVARGMQFLSSR 155
L L F Q+A GM F+ R
Sbjct: 282 PLPK--LIDFSAQIAEGMAFIEQR 303
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
R + GYR+ +P++C ELYNIM CW P ERP F
Sbjct: 396 RALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTF 432
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 1 MNDPVLNQKSDDKW-EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKE 59
M P++NQ K E+ ++ + LGE FG+V+K G E VA+KTLK+
Sbjct: 7 MEMPLINQHKQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKD 66
Query: 60 NAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL--RSS 117
A R + E + L HPNVV LLG T+ +P +I Y +G L FL RS
Sbjct: 67 KAEGPLREEFRHEAMLRARLQ-HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSP 125
Query: 118 RAQR-YYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
+ ++ ++L D Q+A GM++LSS V
Sbjct: 126 HSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHV 166
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+R+ L PD C +Y +M CW++ P+ RP F
Sbjct: 260 IRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRF 294
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 15/142 (10%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELT 74
E+ +I + ++G G FG+V C + VA+KTLK E++R D L E +
Sbjct: 12 ELDATNISIDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 69
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLT 134
+M D HPN++RL G T+ +P ++ E + G L SFLR AQ T
Sbjct: 70 IMGQFD-HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ------------FT 116
Query: 135 SRDLTSFCYQVARGMQFLSSRG 156
L +A GM++LS G
Sbjct: 117 VIQLVGMLRGIASGMKYLSDMG 138
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ V +GYRL P C LY +M CW K+ N RP F
Sbjct: 232 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKF 268
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 69/143 (48%), Gaps = 21/143 (14%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
+WEVPR+ +K+ + LG G FG+VW + G VAVK+LK+ G L E
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVW------MGYYNGHTKVAVKSLKQ--GSMSPDAFLAE 54
Query: 73 LTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNS 132
+MK L H +VRL T+ EP ++I EY+ G L FL++ +
Sbjct: 55 ANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK----------- 101
Query: 133 LTSRDLTSFCYQVARGMQFLSSR 155
LT L Q+A GM F+ R
Sbjct: 102 LTINKLLDMAAQIAEGMAFIEER 124
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
GYR+ +PD+C ELY +M CW + P +RP F
Sbjct: 222 GYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 253
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 16/149 (10%)
Query: 6 LNQKSDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERE 65
L + ++ + R+ + + ILGEG FG+V+ E + + + VAVKT K++
Sbjct: 11 LVPRGSPQYGIAREDVVLNRILGEGFFGEVY--EGVYTNHKGEKINVAVKTCKKDCTLDN 68
Query: 66 RLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 125
+ + E +MK LD HP++V+L+G E+EP ++IME PYG+L +L ++
Sbjct: 69 KEKFMSEAVIMKNLD-HPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNK------- 119
Query: 126 MHGKSNSLTSRDLTSFCYQVARGMQFLSS 154
NSL L + Q+ + M +L S
Sbjct: 120 -----NSLKVLTLVLYSLQICKAMAYLES 143
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL KPD C LY +M CWD +P++RP FT
Sbjct: 242 GDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFT 274
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 76/142 (53%), Gaps = 16/142 (11%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
++ + R+ + + ILGEG FG+V+ E + + + VAVKT K++ + + E
Sbjct: 2 QYGIAREDVVLNRILGEGFFGEVY--EGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSE 59
Query: 73 LTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNS 132
+MK LD HP++V+L+G E+EP ++IME PYG+L +L ++ NS
Sbjct: 60 AVIMKNLD-HPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNK------------NS 105
Query: 133 LTSRDLTSFCYQVARGMQFLSS 154
L L + Q+ + M +L S
Sbjct: 106 LKVLTLVLYSLQICKAMAYLES 127
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL KPD C LY +M CWD +P++RP FT
Sbjct: 226 GDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFT 258
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 76/142 (53%), Gaps = 16/142 (11%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
++ + R+ + + ILGEG FG+V+ E + + + VAVKT K++ + + E
Sbjct: 6 QYGIAREDVVLNRILGEGFFGEVY--EGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSE 63
Query: 73 LTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNS 132
+MK LD HP++V+L+G E+EP ++IME PYG+L +L ++ NS
Sbjct: 64 AVIMKNLD-HPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNK------------NS 109
Query: 133 LTSRDLTSFCYQVARGMQFLSS 154
L L + Q+ + M +L S
Sbjct: 110 LKVLTLVLYSLQICKAMAYLES 131
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL KPD C LY +M CWD +P++RP FT
Sbjct: 230 GDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFT 262
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 17/140 (12%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEA-LGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
E+ IK+ ++G G FG+V C L + G+ C VA+KTLK +++R D L E
Sbjct: 10 EIDASCIKIEKVIGVGEFGEV--CSGRLKVPGKREIC-VAIKTLKAGYTDKQRRDFLSEA 66
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSL 133
++M D HPN++ L G T+ +P +I EY+ G L +FLR + +
Sbjct: 67 SIMGQFD-HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR------------F 113
Query: 134 TSRDLTSFCYQVARGMQFLS 153
T L + GM++LS
Sbjct: 114 TVIQLVGMLRGIGSGMKYLS 133
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ + +GYRL P C L+ +M CW KE ++RP F
Sbjct: 230 KAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKF 266
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 17/140 (12%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEA-LGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
E+ IK+ ++G G FG+V C L + G+ C VA+KTLK +++R D L E
Sbjct: 4 EIDASCIKIEKVIGVGEFGEV--CSGRLKVPGKREIC-VAIKTLKAGYTDKQRRDFLSEA 60
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSL 133
++M D HPN++ L G T+ +P +I EY+ G L +FLR + +
Sbjct: 61 SIMGQFD-HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR------------F 107
Query: 134 TSRDLTSFCYQVARGMQFLS 153
T L + GM++LS
Sbjct: 108 TVIQLVGMLRGIGSGMKYLS 127
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ + +GYRL P C L+ +M CW KE ++RP F
Sbjct: 224 KAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKF 260
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 11 DDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL 70
+D WEVPR+ +K+ + LG G G+VW + G VAVK+LK+ G L
Sbjct: 5 EDAWEVPRETLKLVERLGAGQAGEVW------MGYYNGHTKVAVKSLKQ--GSMSPDAFL 56
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E +MK L H +VRL T+ EP ++I EY+ G L FL++ +
Sbjct: 57 AEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK--------- 105
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSR 155
LT L Q+A GM F+ R
Sbjct: 106 --LTINKLLDMAAQIAEGMAFIEER 128
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
GYR+ +PD+C ELY +M CW + P +RP F
Sbjct: 226 GYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 257
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 17/140 (12%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEA-LGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
E+ IK+ ++G G FG+V C L + G+ C VA+KTLK +++R D L E
Sbjct: 25 EIDASCIKIEKVIGVGEFGEV--CSGRLKVPGKREIC-VAIKTLKAGYTDKQRRDFLSEA 81
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSL 133
++M D HPN++ L G T+ +P +I EY+ G L +FLR + +
Sbjct: 82 SIMGQFD-HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR------------F 128
Query: 134 TSRDLTSFCYQVARGMQFLS 153
T L + GM++LS
Sbjct: 129 TVIQLVGMLRGIGSGMKYLS 148
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ + +GYRL P C L+ +M CW KE ++RP F
Sbjct: 245 KAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKF 281
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 21/151 (13%)
Query: 2 NDPVLNQKSDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENA 61
+ P + D WE+PR+ +++ LG+GCFG+VW + G VA+KTLK
Sbjct: 250 SKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGT 303
Query: 62 GERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQR 121
E LQE VMK L H +V+L +E EP +++ EY+ G L FL+ +
Sbjct: 304 MSPEA--FLQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKY 359
Query: 122 YYNNMHGKSNSLTSRDLTSFCYQVARGMQFL 152
L L Q+A GM ++
Sbjct: 360 -----------LRLPQLVDMAAQIASGMAYV 379
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GYR+ P C L+++M CW KEP ERP F
Sbjct: 477 VERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 511
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 18/133 (13%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
+++G G FG V+ L DG++ C AVK+L E L E +MK HPN
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHC--AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 90
Query: 85 VVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 142
V+ LLG C +E P V++ Y+ +G L++F+R+ ++++ T +DL F
Sbjct: 91 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRN------------ETHNPTVKDLIGFG 137
Query: 143 YQVARGMQFLSSR 155
QVA+GM+FL+S+
Sbjct: 138 LQVAKGMKFLASK 150
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL +P++C LY +M CW + RP+F+
Sbjct: 251 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 283
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 21/151 (13%)
Query: 2 NDPVLNQKSDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENA 61
+ P + D WE+PR+ +++ LG+GCFG+VW + G VA+KTLK
Sbjct: 167 SKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGT 220
Query: 62 GERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQR 121
E LQE VMK L H +V+L +E EP +++ EY+ G L FL+ +
Sbjct: 221 MSPE--AFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKY 276
Query: 122 YYNNMHGKSNSLTSRDLTSFCYQVARGMQFL 152
L L Q+A GM ++
Sbjct: 277 -----------LRLPQLVDMAAQIASGMAYV 296
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GYR+ P C L+++M CW KEP ERP F
Sbjct: 394 VERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 428
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 18/133 (13%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
+++G G FG V+ L DG++ C AVK+L E L E +MK HPN
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHC--AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 97
Query: 85 VVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 142
V+ LLG C +E P V++ Y+ +G L++F+R+ ++++ T +DL F
Sbjct: 98 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRN------------ETHNPTVKDLIGFG 144
Query: 143 YQVARGMQFLSSR 155
QVA+GM+FL+S+
Sbjct: 145 LQVAKGMKFLASK 157
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL +P++C LY +M CW + RP+F+
Sbjct: 258 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 290
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 21/143 (14%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
+ D WE+PR+ +++ LG+GCFG+VW + G VA+KTLK E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPE--AF 60
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
LQE VMK L H +V+L +E EP +++MEY+ G L FL+ +
Sbjct: 61 LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGK--------- 109
Query: 130 SNSLTSRDLTSFCYQVARGMQFL 152
L L Q+A GM ++
Sbjct: 110 --YLRLPQLVDMAAQIASGMAYV 130
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GYR+ P C L+++M CW K+P ERP F
Sbjct: 228 VERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 21/151 (13%)
Query: 2 NDPVLNQKSDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENA 61
+ P + D WE+PR+ +++ LG+GCFG+VW + G VA+KTLK
Sbjct: 167 SKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGT 220
Query: 62 GERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQR 121
E LQE VMK L H +V+L +E EP +++ EY+ G L FL+ +
Sbjct: 221 MSPE--AFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKY 276
Query: 122 YYNNMHGKSNSLTSRDLTSFCYQVARGMQFL 152
L L Q+A GM ++
Sbjct: 277 -----------LRLPQLVDMAAQIASGMAYV 296
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GYR+ P C L+++M CW KEP ERP F
Sbjct: 394 VERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 428
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 18/133 (13%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
+++G G FG V+ L DG++ C AVK+L E L E +MK HPN
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHC--AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 93
Query: 85 VVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 142
V+ LLG C +E P V++ Y+ +G L++F+R+ ++++ T +DL F
Sbjct: 94 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRN------------ETHNPTVKDLIGFG 140
Query: 143 YQVARGMQFLSSR 155
QVA+GM+FL+S+
Sbjct: 141 LQVAKGMKFLASK 153
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL +P++C LY +M CW + RP+F+
Sbjct: 254 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 286
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 18/133 (13%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
+++G G FG V+ L DG++ C AVK+L E L E +MK HPN
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHC--AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 92
Query: 85 VVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 142
V+ LLG C +E P V++ Y+ +G L++F+R+ ++++ T +DL F
Sbjct: 93 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRN------------ETHNPTVKDLIGFG 139
Query: 143 YQVARGMQFLSSR 155
QVA+GM+FL+S+
Sbjct: 140 LQVAKGMKFLASK 152
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL +P++C LY +M CW + RP+F+
Sbjct: 253 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 285
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 21/143 (14%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
+ D WE+PR+ +++ LG+GCFG+VW + G VA+KTLK E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPE--AF 60
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
LQE VMK L H +V+L +E EP ++++EY+ G L FL+ +
Sbjct: 61 LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGK--------- 109
Query: 130 SNSLTSRDLTSFCYQVARGMQFL 152
L L Q+A GM ++
Sbjct: 110 --YLRLPQLVDMAAQIASGMAYV 130
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GYR+ P C L+++M CW K+P ERP F
Sbjct: 228 VERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 18/133 (13%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
+++G G FG V+ L DG++ C AVK+L E L E +MK HPN
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHC--AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 92
Query: 85 VVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 142
V+ LLG C +E P V++ Y+ +G L++F+R+ ++++ T +DL F
Sbjct: 93 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRN------------ETHNPTVKDLIGFG 139
Query: 143 YQVARGMQFLSSR 155
QVA+GM+FL+S+
Sbjct: 140 LQVAKGMKFLASK 152
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL +P++C LY +M CW + RP+F+
Sbjct: 253 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 285
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 21/143 (14%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
+ D WE+PR+ +++ LG+GCFG+VW + G VA+KTLK E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPE--AF 60
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
LQE VMK L H +V+L +E EP ++++EY+ G L FL+ +
Sbjct: 61 LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGK--------- 109
Query: 130 SNSLTSRDLTSFCYQVARGMQFL 152
L L Q+A GM ++
Sbjct: 110 --YLRLPQLVDMAAQIASGMAYV 130
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GYR+ P C L+++M CW K+P ERP F
Sbjct: 228 VERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 15/142 (10%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELT 74
E+ I + ++G G FG+V RE P VA+KTLK E++R D L E +
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELP--VAIKTLKVGYTEKQRRDFLGEAS 75
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLT 134
+M D HPN++ L G T+ +P ++ EY+ G L +FL+ + Q T
Sbjct: 76 IMGQFD-HPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ------------FT 122
Query: 135 SRDLTSFCYQVARGMQFLSSRG 156
L ++ GM++LS G
Sbjct: 123 VIQLVGMLRGISAGMKYLSDMG 144
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 21/37 (56%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ V +GYRL P C LY +M CW KE N RP F
Sbjct: 238 KAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKF 274
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 18/133 (13%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
+++G G FG V+ L DG++ C AVK+L E L E +MK HPN
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHC--AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 93
Query: 85 VVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 142
V+ LLG C +E P V++ Y+ +G L++F+R+ ++++ T +DL F
Sbjct: 94 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRN------------ETHNPTVKDLIGFG 140
Query: 143 YQVARGMQFLSSR 155
QVA+GM+FL+S+
Sbjct: 141 LQVAKGMKFLASK 153
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL +P++C LY +M CW + RP+F+
Sbjct: 254 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 286
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 18/133 (13%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
+++G G FG V+ L DG++ C AVK+L E L E +MK HPN
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHC--AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 151
Query: 85 VVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 142
V+ LLG C +E P V++ Y+ +G L++F+R+ ++++ T +DL F
Sbjct: 152 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRN------------ETHNPTVKDLIGFG 198
Query: 143 YQVARGMQFLSSR 155
QVA+GM+FL+S+
Sbjct: 199 LQVAKGMKFLASK 211
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL +P++C LY +M CW + RP+F+
Sbjct: 312 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 344
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 17/137 (12%)
Query: 21 IKVFDILGEGCFGQVWKCEA-LGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTL 79
IK+ ++G G FG+V C L + G+ VA+KTLK E++R D L E ++M
Sbjct: 45 IKIERVIGAGEFGEV--CSGRLKLPGKRD-VAVAIKTLKVGYTEKQRRDFLCEASIMGQF 101
Query: 80 DPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLT 139
D HPNVV L G T +P +++E++ G L +FLR Q T L
Sbjct: 102 D-HPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ------------FTVIQLV 148
Query: 140 SFCYQVARGMQFLSSRG 156
+A GM++L+ G
Sbjct: 149 GMLRGIAAGMRYLADMG 165
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ + +GYRL P C L+ +M CW KE ERP F
Sbjct: 259 KAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKF 295
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 21/151 (13%)
Query: 2 NDPVLNQKSDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENA 61
+ P + D WE+PR+ +++ LG+GCFG+VW + G VA+KTLK
Sbjct: 168 SKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLK--P 219
Query: 62 GERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQR 121
G LQE VMK L H +V+L +E EP +++ EY+ G L FL+ +
Sbjct: 220 GNMSPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKY 277
Query: 122 YYNNMHGKSNSLTSRDLTSFCYQVARGMQFL 152
L L Q+A GM ++
Sbjct: 278 -----------LRLPQLVDMAAQIASGMAYV 297
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GYR+ P C L+++M CW K+P ERP F
Sbjct: 395 VERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF 429
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 21/151 (13%)
Query: 2 NDPVLNQKSDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENA 61
+ P + D WE+PR+ +++ LG+GCFG+VW + G VA+KTLK
Sbjct: 167 SKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGT 220
Query: 62 GERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQR 121
E LQE VMK L H +V+L +E EP +++ EY+ G L FL+ +
Sbjct: 221 MSPE--AFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGETGKY 276
Query: 122 YYNNMHGKSNSLTSRDLTSFCYQVARGMQFL 152
L L Q+A GM ++
Sbjct: 277 -----------LRLPQLVDMAAQIASGMAYV 296
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GYR+ P C L+++M CW KEP ERP F
Sbjct: 394 VERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 428
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
+ D WE+PR+ +++ LG+GCFG+VW + G VA+KTLK E
Sbjct: 2 AKDAWEIPRESLRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPE--AF 53
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
LQE VMK L H +V+L +E EP +++ EY+ G L FL+ +
Sbjct: 54 LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGK--------- 102
Query: 130 SNSLTSRDLTSFCYQVARGMQFL 152
L L Q+A GM ++
Sbjct: 103 --YLRLPQLVDMAAQIASGMAYV 123
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GYR+ P C L+++M CW KEP ERP F
Sbjct: 221 VERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 255
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
+ D WE+PR+ +++ LG+GCFG+VW + G VA+KTLK E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPEA--F 60
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
LQE VMK L H +V+L +E EP +++ EY+ G L FL+ +
Sbjct: 61 LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGK--------- 109
Query: 130 SNSLTSRDLTSFCYQVARGMQFL 152
L L Q+A GM ++
Sbjct: 110 --YLRLPQLVDMAAQIASGMAYV 130
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GYR+ P C L+++M CW K+P ERP F
Sbjct: 228 VERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
+ D WE+PR+ +++ LG+GCFG+VW + G VA+KTLK E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPE--AF 60
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
LQE VMK L H +V+L +E EP +++ EY+ G L FL+ +
Sbjct: 61 LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGK--------- 109
Query: 130 SNSLTSRDLTSFCYQVARGMQFL 152
L L Q+A GM ++
Sbjct: 110 --YLRLPQLVDMAAQIASGMAYV 130
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GYR+ P C L+++M CW K+P ERP F
Sbjct: 228 VERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 21/138 (15%)
Query: 21 IKVFDILGEGCFGQVWKCEALGIDGREGPCI---VAVKTLKENAGERERLDLLQELTVMK 77
+K +LG G FG V+K GI EG + VA+K L E G + ++ + E +M
Sbjct: 17 LKRVKVLGSGAFGTVYK----GIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMA 72
Query: 78 TLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRD 137
++D HP++VRLLG C ++ + +P+G L ++ H +++ S+
Sbjct: 73 SMD-HPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYV------------HEHKDNIGSQL 118
Query: 138 LTSFCYQVARGMQFLSSR 155
L ++C Q+A+GM +L R
Sbjct: 119 LLNWCVQIAKGMMYLEER 136
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
G RL +P C ++Y +M CW + + RP F
Sbjct: 235 GERLPQPPICTIDVYMVMVKCWMIDADSRPKF 266
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 21/138 (15%)
Query: 21 IKVFDILGEGCFGQVWKCEALGIDGREGPCI---VAVKTLKENAGERERLDLLQELTVMK 77
+K +LG G FG V+K GI EG + VA+K L E G + ++ + E +M
Sbjct: 40 LKRVKVLGSGAFGTVYK----GIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMA 95
Query: 78 TLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRD 137
++D HP++VRLLG C ++ + +P+G L ++ H +++ S+
Sbjct: 96 SMD-HPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYV------------HEHKDNIGSQL 141
Query: 138 LTSFCYQVARGMQFLSSR 155
L ++C Q+A+GM +L R
Sbjct: 142 LLNWCVQIAKGMMYLEER 159
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
G RL +P C ++Y +M CW + + RP F
Sbjct: 258 GERLPQPPICTIDVYMVMVKCWMIDADSRPKF 289
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 21/141 (14%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D WE+PR+ +++ LG+GCFG+VW + G VA+KTLK E LQ
Sbjct: 2 DAWEIPRESLRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPE--AFLQ 53
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E VMK L H +V+L +E EP +++ EY+ G L FL+ +
Sbjct: 54 EAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGK----------- 100
Query: 132 SLTSRDLTSFCYQVARGMQFL 152
L L Q+A GM ++
Sbjct: 101 YLRLPQLVDMAAQIASGMAYV 121
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GYR+ P C L+++M CW K+P ERP F
Sbjct: 219 VERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF 253
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 68/141 (48%), Gaps = 21/141 (14%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D WE+PR+ +++ LG G FG+VW + G VA+KTLK E L+
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVW------MGTWNGNTKVAIKTLKPGTMSPE--SFLE 53
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E +MK L H +V+L +E EP +++ EY+ G L FL+ G+
Sbjct: 54 EAQIMKKLK-HDKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKD-----------GEGR 100
Query: 132 SLTSRDLTSFCYQVARGMQFL 152
+L +L QVA GM ++
Sbjct: 101 ALKLPNLVDMAAQVAAGMAYI 121
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GYR+ P C L+ +M +CW K+P ERP F
Sbjct: 219 VERGYRMPCPQDCPISLHELMIHCWKKDPEERPTF 253
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
+ D WE+PR+ +++ LG+GCFG+VW + G VA+KTLK E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPE--AF 60
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
LQE VMK L H +V+L +E EP +++ EY+ G L FL+ +
Sbjct: 61 LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGK--------- 109
Query: 130 SNSLTSRDLTSFCYQVARGMQFL 152
L L Q+A GM ++
Sbjct: 110 --YLRLPQLVDMAAQIASGMAYV 130
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GYR+ P C L+++M CW K+P ERP F
Sbjct: 228 VERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
+ D WE+PR+ +++ LG+GCFG+VW + G VA+KTLK E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPE--AF 60
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
LQE VMK + H +V+L +E EP +++ EY+ G L FL+ +
Sbjct: 61 LQEAQVMKKIR-HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGK--------- 109
Query: 130 SNSLTSRDLTSFCYQVARGMQFL 152
L L Q+A GM ++
Sbjct: 110 --YLRLPQLVDMAAQIASGMAYV 130
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GYR+ P C L+++M CW K+P ERP F
Sbjct: 228 VERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 18/133 (13%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
+++G G FG V+ L DG++ C AVK+L E L E +MK HPN
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHC--AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 87
Query: 85 VVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 142
V+ LLG C +E P V++ Y+ +G L++F+R+ ++++ T +DL F
Sbjct: 88 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRN------------ETHNPTVKDLIGFG 134
Query: 143 YQVARGMQFLSSR 155
QVA+GM++L+S+
Sbjct: 135 LQVAKGMKYLASK 147
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL +P++C LY +M CW + RP+F+
Sbjct: 248 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 280
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 18/133 (13%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
+++G G FG V+ L DG++ C AVK+L E L E +MK HPN
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHC--AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 91
Query: 85 VVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 142
V+ LLG C +E P V++ Y+ +G L++F+R+ ++++ T +DL F
Sbjct: 92 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRN------------ETHNPTVKDLIGFG 138
Query: 143 YQVARGMQFLSSR 155
QVA+GM++L+S+
Sbjct: 139 LQVAKGMKYLASK 151
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL +P++C LY +M CW + RP+F+
Sbjct: 252 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 284
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
+ D WE+PR+ +++ LG+GCFG+VW + G VA+KTLK E
Sbjct: 6 AKDAWEIPRESLRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPE--AF 57
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
LQE VMK L H +V+L +E EP +++ EY+ G L FL+ +
Sbjct: 58 LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGK--------- 106
Query: 130 SNSLTSRDLTSFCYQVARGMQFL 152
L L Q+A GM ++
Sbjct: 107 --YLRLPQLVDMSAQIASGMAYV 127
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GYR+ P C L+++M CW KEP ERP F
Sbjct: 225 VERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 259
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 18/133 (13%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
+++G G FG V+ L DG++ C AVK+L E L E +MK HPN
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHC--AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 92
Query: 85 VVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 142
V+ LLG C +E P V++ Y+ +G L++F+R+ ++++ T +DL F
Sbjct: 93 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRN------------ETHNPTVKDLIGFG 139
Query: 143 YQVARGMQFLSSR 155
QVA+GM++L+S+
Sbjct: 140 LQVAKGMKYLASK 152
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL +P++C LY +M CW + RP+F+
Sbjct: 253 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 285
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 18/133 (13%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
+++G G FG V+ L DG++ C AVK+L E L E +MK HPN
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHC--AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 92
Query: 85 VVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 142
V+ LLG C +E P V++ Y+ +G L++F+R+ ++++ T +DL F
Sbjct: 93 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRN------------ETHNPTVKDLIGFG 139
Query: 143 YQVARGMQFLSSR 155
QVA+GM++L+S+
Sbjct: 140 LQVAKGMKYLASK 152
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL +P++C LY +M CW + RP+F+
Sbjct: 253 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 285
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
+ D WE+PR+ +++ LG+GCFG+VW + G VA+KTLK E
Sbjct: 6 AKDAWEIPRESLRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPE--AF 57
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
LQE VMK L H +V+L +E EP +++ EY+ G L FL+ +
Sbjct: 58 LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGK--------- 106
Query: 130 SNSLTSRDLTSFCYQVARGMQFL 152
L L Q+A GM ++
Sbjct: 107 --YLRLPQLVDMSAQIASGMAYV 127
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GYR+ P C L+++M CW KEP ERP F
Sbjct: 225 VERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 259
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 18/133 (13%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
+++G G FG V+ L DG++ C AVK+L E L E +MK HPN
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHC--AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 110
Query: 85 VVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 142
V+ LLG C +E P V++ Y+ +G L++F+R+ ++++ T +DL F
Sbjct: 111 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRN------------ETHNPTVKDLIGFG 157
Query: 143 YQVARGMQFLSSR 155
QVA+GM++L+S+
Sbjct: 158 LQVAKGMKYLASK 170
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL +P++C LY +M CW + RP+F+
Sbjct: 271 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 303
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 18/133 (13%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
+++G G FG V+ L DG++ C AVK+L E L E +MK HPN
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHC--AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 90
Query: 85 VVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 142
V+ LLG C +E P V++ Y+ +G L++F+R+ ++++ T +DL F
Sbjct: 91 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRN------------ETHNPTVKDLIGFG 137
Query: 143 YQVARGMQFLSSR 155
QVA+GM++L+S+
Sbjct: 138 LQVAKGMKYLASK 150
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL +P++C LY +M CW + RP+F+
Sbjct: 251 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 283
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 18/133 (13%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
+++G G FG V+ L DG++ C AVK+L E L E +MK HPN
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHC--AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 111
Query: 85 VVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 142
V+ LLG C +E P V++ Y+ +G L++F+R+ ++++ T +DL F
Sbjct: 112 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRN------------ETHNPTVKDLIGFG 158
Query: 143 YQVARGMQFLSSR 155
QVA+GM++L+S+
Sbjct: 159 LQVAKGMKYLASK 171
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL +P++C LY +M CW + RP+F+
Sbjct: 272 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 304
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 18/133 (13%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
+++G G FG V+ L DG++ C AVK+L E L E +MK HPN
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHC--AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 91
Query: 85 VVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 142
V+ LLG C +E P V++ Y+ +G L++F+R+ ++++ T +DL F
Sbjct: 92 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRN------------ETHNPTVKDLIGFG 138
Query: 143 YQVARGMQFLSSR 155
QVA+GM++L+S+
Sbjct: 139 LQVAKGMKYLASK 151
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL +P++C LY +M CW + RP+F+
Sbjct: 252 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 284
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 18/133 (13%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
+++G G FG V+ L DG++ C AVK+L E L E +MK HPN
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHC--AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 89
Query: 85 VVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 142
V+ LLG C +E P V++ Y+ +G L++F+R+ ++++ T +DL F
Sbjct: 90 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRN------------ETHNPTVKDLIGFG 136
Query: 143 YQVARGMQFLSSR 155
QVA+GM++L+S+
Sbjct: 137 LQVAKGMKYLASK 149
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL +P++C LY +M CW + RP+F+
Sbjct: 250 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 282
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
Query: 16 VPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK-ENAGERERLDLLQELT 74
+ R + + ILGEG FG V + DG VAVKT+K +N+ +RE + L E
Sbjct: 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTS--LKVAVKTMKLDNSSQREIEEFLSEAA 88
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPF-----FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
MK HPNV+RLLG C E VI+ ++ YG L ++L Y+ +
Sbjct: 89 CMKDFS-HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL-------LYSRLETG 140
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ + L F +A GM++LS+R
Sbjct: 141 PKHIPLQTLLKFMVDIALGMEYLSNR 166
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G+RL++P+ C ELY IMY CW +P +RP F+
Sbjct: 265 GHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFS 297
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 18/133 (13%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
+++G G FG V+ L DG++ C AVK+L E L E +MK HPN
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHC--AVKSLNRITDIGEVSQFLTEGIIMKDFS-HPN 84
Query: 85 VVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 142
V+ LLG C +E P V++ Y+ +G L++F+R+ ++++ T +DL F
Sbjct: 85 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRN------------ETHNPTVKDLIGFG 131
Query: 143 YQVARGMQFLSSR 155
QVA+GM++L+S+
Sbjct: 132 LQVAKGMKYLASK 144
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL +P++C LY +M CW + RP+F+
Sbjct: 245 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 277
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
+ D WE+PR+ +++ LG+GCFG+VW + G VA+KTLK E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPE--AF 60
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
LQE VMK L H +V+L +E EP +++ EY+ G L FL+ +
Sbjct: 61 LQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGK--------- 109
Query: 130 SNSLTSRDLTSFCYQVARGMQFL 152
L L Q+A GM ++
Sbjct: 110 --YLRLPQLVDMAAQIASGMAYV 130
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GYR+ P C L+++M CW K+P ERP F
Sbjct: 228 VERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELT 74
E+ ++ + LGE FG+V+K G E VA+KTLK+ A R + E
Sbjct: 5 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 64
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL--RSSRAQ-RYYNNMHGKSN 131
+ L HPNVV LLG T+ +P +I Y +G L FL RS + ++ +
Sbjct: 65 LRARLQ-HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 123
Query: 132 SLTSRDLTSFCYQVARGMQFLSSRGV 157
+L D Q+A GM++LSS V
Sbjct: 124 ALEPPDFVHLVAQIAAGMEYLSSHHV 149
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+R+ L PD C +Y +M CW++ P+ RP F
Sbjct: 243 IRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRF 277
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 66/141 (46%), Gaps = 21/141 (14%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D WE+PR+ +++ LG+GCFG+VW + G VA+KTLK E LQ
Sbjct: 1 DAWEIPRESLRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPE--AFLQ 52
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSN 131
E VMK L H +V+L +E EP ++ EY+ G L FL+ +
Sbjct: 53 EAQVMKKLR-HEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGETGK----------- 99
Query: 132 SLTSRDLTSFCYQVARGMQFL 152
L L Q+A GM ++
Sbjct: 100 YLRLPQLVDMAAQIASGMAYV 120
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GYR+ P C L+++M CW KEP ERP F
Sbjct: 218 VERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 252
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 19/145 (13%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD-LL 70
D ++P + + + +G G FG V + E G D VAVK L E ER++ L
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSD-------VAVKILMEQDFHAERVNEFL 82
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
+E+ +MK L HPN+V +G T+ ++ EY+ G L L S G
Sbjct: 83 REVAIMKRLR-HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS----------GAR 131
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSR 155
L R S Y VA+GM +L +R
Sbjct: 132 EQLDERRRLSMAYDVAKGMNYLHNR 156
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 162 RLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
RLE P + ++ I+ CW EP +RP+F
Sbjct: 257 RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFA 287
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 19/145 (13%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD-LL 70
D ++P + + + +G G FG V + E G D VAVK L E ER++ L
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSD-------VAVKILMEQDFHAERVNEFL 82
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
+E+ +MK L HPN+V +G T+ ++ EY+ G L L S G
Sbjct: 83 REVAIMKRLR-HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS----------GAR 131
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSR 155
L R S Y VA+GM +L +R
Sbjct: 132 EQLDERRRLSMAYDVAKGMNYLHNR 156
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 162 RLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
RLE P + ++ I+ CW EP +RP+F
Sbjct: 257 RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFA 287
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 21/139 (15%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
WE+PR+ +++ LG+GCFG+VW + G VA+KTLK E LQE
Sbjct: 2 WEIPRESLRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLKPGTMSPE--AFLQEA 53
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSL 133
VMK L H +V+L +E EP +++ EY+ G L FL+ + L
Sbjct: 54 QVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGK-----------YL 100
Query: 134 TSRDLTSFCYQVARGMQFL 152
L Q+A GM ++
Sbjct: 101 RLPQLVDMAAQIASGMAYV 119
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GYR+ P C L+++M CW K+P ERP F
Sbjct: 217 VERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF 251
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 19 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +IM+ +P+G L ++R + +++ S+ L +
Sbjct: 77 -NPHVCRLLGICLTST-VQLIMQLMPFGXLLDYVREHK------------DNIGSQYLLN 122
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 123 WCVQIAKGMNYLEDR 137
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 230 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 267
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 65/141 (46%), Gaps = 21/141 (14%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELT 74
E+ R+ I + LG G FG V + +G VAVK +KE G + QE
Sbjct: 4 ELKREEITLLKELGSGQFGVV------KLGKWKGQYDVAVKMIKE--GSMSEDEFFQEAQ 55
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLT 134
M L HP +V+ G C+++ P +++ EY+ G L ++LRS HGK L
Sbjct: 56 TMMKLS-HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRS----------HGK--GLE 102
Query: 135 SRDLTSFCYQVARGMQFLSSR 155
L CY V GM FL S
Sbjct: 103 PSQLLEMCYDVCEGMAFLESH 123
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V G+RL +P +Y IMY CW + P +RP F
Sbjct: 218 VSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTF 252
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 63/142 (44%), Gaps = 15/142 (10%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELT 74
E+ I + I+G G G+V R+ P VA+K LK ER+R D L E +
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVP--VAIKALKAGYTERQRRDFLSEAS 102
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLT 134
+M D HPN++RL G T ++ EY+ G L +FLR+ Q T
Sbjct: 103 IMGQFD-HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ------------FT 149
Query: 135 SRDLTSFCYQVARGMQFLSSRG 156
L V GM++LS G
Sbjct: 150 IMQLVGMLRGVGAGMRYLSDLG 171
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 34/113 (30%)
Query: 81 PHPNVVRLLGCCTEKEPFFVIM-EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLT 139
P R ++ F V+M E + YG +R Y NM T+RD+
Sbjct: 223 PEAIAFRTFSSASDVWSFGVVMWEVLAYG-----------ERPYWNM-------TNRDVI 264
Query: 140 SFCYQVARGMQFLSSRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
S V +GYRL P C L+ +M CW K+ +RP F+
Sbjct: 265 S---------------SVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFS 302
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 63/142 (44%), Gaps = 15/142 (10%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELT 74
E+ I + I+G G G+V R+ P VA+K LK ER+R D L E +
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVP--VAIKALKAGYTERQRRDFLSEAS 102
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLT 134
+M D HPN++RL G T ++ EY+ G L +FLR+ Q T
Sbjct: 103 IMGQFD-HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ------------FT 149
Query: 135 SRDLTSFCYQVARGMQFLSSRG 156
L V GM++LS G
Sbjct: 150 IMQLVGMLRGVGAGMRYLSDLG 171
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 34/113 (30%)
Query: 81 PHPNVVRLLGCCTEKEPFFVIM-EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLT 139
P R ++ F V+M E + YG +R Y NM T+RD+
Sbjct: 223 PEAIAFRTFSSASDVWSFGVVMWEVLAYG-----------ERPYWNM-------TNRDVI 264
Query: 140 SFCYQVARGMQFLSSRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
S V +GYRL P C L+ +M CW K+ +RP F+
Sbjct: 265 S---------------SVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFS 302
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 16/146 (10%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S +E+ R+ I++ +GEG FG V + + + VA+KT K + R
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVH--QGIYMSPENPALAVAIKTCKNCTSDSVREKF 86
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
LQE M+ D HP++V+L+G TE P ++IME G+L+SFL + ++Y
Sbjct: 87 LQEALTMRQFD-HPHIVKLIGVITEN-PVWIIMELCTLGELRSFL---QVRKY------- 134
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
SL L + YQ++ + +L S+
Sbjct: 135 --SLDLASLILYAYQLSTALAYLESK 158
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ +G RL P +C LY++M CW +P+ RP FT
Sbjct: 253 IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 288
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 16/146 (10%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S +E+ R+ I++ +GEG FG V + + + VA+KT K + R
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVH--QGIYMSPENPALAVAIKTCKNCTSDSVREKF 60
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
LQE M+ D HP++V+L+G TE P ++IME G+L+SFL + ++Y
Sbjct: 61 LQEALTMRQFD-HPHIVKLIGVITEN-PVWIIMELCTLGELRSFL---QVRKY------- 108
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
SL L + YQ++ + +L S+
Sbjct: 109 --SLDLASLILYAYQLSTALAYLESK 132
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ +G RL P +C LY++M CW +P+ RP FT
Sbjct: 227 IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 262
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 16/146 (10%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S +E+ R+ I++ +GEG FG V + + + VA+KT K + R
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVH--QGIYMSPENPALAVAIKTCKNCTSDSVREKF 61
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
LQE M+ D HP++V+L+G TE P ++IME G+L+SFL + ++Y
Sbjct: 62 LQEALTMRQFD-HPHIVKLIGVITEN-PVWIIMELCTLGELRSFL---QVRKY------- 109
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
SL L + YQ++ + +L S+
Sbjct: 110 --SLDLASLILYAYQLSTALAYLESK 133
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ +G RL P +C LY++M CW +P+ RP FT
Sbjct: 228 IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 263
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S +E+ R+ I++ +GEG FG V + + + VA+KT K + R
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVH--QGIYMSPENPAMAVAIKTCKNCTSDSVREKF 438
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
LQE M+ D HP++V+L+G TE P ++IME G+L+SFL+ +
Sbjct: 439 LQEALTMRQFD-HPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKF---------- 486
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
SL L + YQ++ + +L S+
Sbjct: 487 --SLDLASLILYAYQLSTALAYLESK 510
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ +G RL P +C LY++M CW +P+ RP FT
Sbjct: 605 IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 640
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S +E+ R+ I++ +GEG FG V + + + VA+KT K + R
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVH--QGIYMSPENPAMAVAIKTCKNCTSDSVREKF 438
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
LQE M+ D HP++V+L+G TE P ++IME G+L+SFL+ +
Sbjct: 439 LQEALTMRQFD-HPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKF---------- 486
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
SL L + YQ++ + +L S+
Sbjct: 487 --SLDLASLILYAYQLSTALAYLESK 510
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ +G RL P +C LY++M CW +P+ RP FT
Sbjct: 605 IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 640
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 16/146 (10%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S +E+ R+ I++ +GEG FG V + + + VA+KT K + R
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVH--QGIYMSPENPALAVAIKTCKNCTSDSVREKF 58
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
LQE M+ D HP++V+L+G TE P ++IME G+L+SFL + ++Y
Sbjct: 59 LQEALTMRQFD-HPHIVKLIGVITEN-PVWIIMELCTLGELRSFL---QVRKY------- 106
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
SL L + YQ++ + +L S+
Sbjct: 107 --SLDLASLILYAYQLSTALAYLESK 130
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ +G RL P +C LY++M CW +P+ RP FT
Sbjct: 225 IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 260
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 16/146 (10%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S +E+ R+ I++ +GEG FG V + + + VA+KT K + R
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVH--QGIYMSPENPALAVAIKTCKNCTSDSVREKF 63
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
LQE M+ D HP++V+L+G TE P ++IME G+L+SFL + ++Y
Sbjct: 64 LQEALTMRQFD-HPHIVKLIGVITEN-PVWIIMELCTLGELRSFL---QVRKY------- 111
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
SL L + YQ++ + +L S+
Sbjct: 112 --SLDLASLILYAYQLSTALAYLESK 135
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ +G RL P +C LY++M CW +P+ RP FT
Sbjct: 230 IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 265
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 16/146 (10%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S +E+ R+ I++ +GEG FG V + + + VA+KT K + R
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVH--QGIYMSPENPAMAVAIKTCKNCTSDSVREKF 58
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
LQE M+ D HP++V+L+G TE P ++IME G+L+SFL + ++Y
Sbjct: 59 LQEALTMRQFD-HPHIVKLIGVITEN-PVWIIMELCTLGELRSFL---QVRKY------- 106
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
SL L + YQ++ + +L S+
Sbjct: 107 --SLDLASLILYAYQLSTALAYLESK 130
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ +G RL P +C LY++M CW +P+ RP FT
Sbjct: 225 IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 260
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 16/142 (11%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
+E+ R+ I++ +GEG FG V + + + VA+KT K + R LQE
Sbjct: 2 YEIQRERIELGRCIGEGQFGDVH--QGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 59
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSL 133
M+ D HP++V+L+G TE P ++IME G+L+SFL + ++Y SL
Sbjct: 60 LTMRQFD-HPHIVKLIGVITEN-PVWIIMELCTLGELRSFL---QVRKY---------SL 105
Query: 134 TSRDLTSFCYQVARGMQFLSSR 155
L + YQ++ + +L S+
Sbjct: 106 DLASLILYAYQLSTALAYLESK 127
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ +G RL P +C LY++M CW +P+ RP FT
Sbjct: 222 IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 257
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 22 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +IM+ +P+G L ++R + +++ S+ L +
Sbjct: 80 -NPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHK------------DNIGSQYLLN 125
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 126 WCVQIAKGMNYLEDR 140
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 233 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 270
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 20 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +IM+ +P+G L ++R + +++ S+ L +
Sbjct: 78 -NPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHK------------DNIGSQYLLN 123
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 124 WCVQIAKGMNYLEDR 138
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 231 SSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKF 268
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 22 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +IM+ +P+G L ++R + +++ S+ L +
Sbjct: 80 -NPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHK------------DNIGSQYLLN 125
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 126 WCVQIAKGMNYLEDR 140
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 233 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 270
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 20 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +IM+ +P+G L ++R + +++ S+ L +
Sbjct: 78 -NPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHK------------DNIGSQYLLN 123
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 124 WCVQIAKGMNYLEDR 138
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 231 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 268
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 18 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +IM+ +P+G L ++R + +++ S+ L +
Sbjct: 76 -NPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHK------------DNIGSQYLLN 121
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 122 WCVQIAKGMNYLEDR 136
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 229 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 266
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 21 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +IM+ +P+G L ++R + +++ S+ L +
Sbjct: 79 -NPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHK------------DNIGSQYLLN 124
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 125 WCVQIAKGMNYLEDR 139
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 232 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 269
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 19 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +IM+ +P+G L ++R + +++ S+ L +
Sbjct: 77 -NPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHK------------DNIGSQYLLN 122
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 123 WCVQIAKGMNYLEDR 137
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 230 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 267
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 20 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +IM+ +P+G L ++R + +++ S+ L +
Sbjct: 78 -NPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHK------------DNIGSQYLLN 123
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 124 WCVQIAKGMNYLEDR 138
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 231 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 268
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S +E+ R+ I++ +GEG FG V + + + VA+KT K + R
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVH--QGIYMSPENPAMAVAIKTCKNCTSDSVREKF 58
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
LQE M+ D HP++V+L+G TE P ++IME G+L+SFL+ +
Sbjct: 59 LQEALTMRQFD-HPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV------------R 104
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
SL L + YQ++ + +L S+
Sbjct: 105 KFSLDLASLILYAYQLSTALAYLESK 130
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ +G RL P +C LY++M CW +P+ RP FT
Sbjct: 225 IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 260
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S +E+ R+ I++ +GEG FG V + + + VA+KT K + R
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVH--QGIYMSPENPAMAVAIKTCKNCTSDSVREKF 58
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
LQE M+ D HP++V+L+G TE P ++IME G+L+SFL+ +
Sbjct: 59 LQEALTMRQFD-HPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV------------R 104
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
SL L + YQ++ + +L S+
Sbjct: 105 KFSLDLASLILYAYQLSTALAYLESK 130
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ +G RL P +C LY++M CW +P+ RP FT
Sbjct: 225 IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 260
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 14/129 (10%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNV 85
++G G FG+V+K G++ VA+KTLK E++R+D L E +M H N+
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKK-EVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH-NI 108
Query: 86 VRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQV 145
+RL G ++ +P +I EY+ G L FLR K + L +
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLRE------------KDGEFSVLQLVGMLRGI 156
Query: 146 ARGMQFLSS 154
A GM++L++
Sbjct: 157 AAGMKYLAN 165
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 155 RGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ + DG+RL P C +Y +M CW +E RP F
Sbjct: 261 KAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFA 298
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 21/130 (16%)
Query: 26 ILGEGCFGQVWKCEALGI---DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPH 82
+LG G FG V+K GI DG VA+K L+EN + ++L E VM +
Sbjct: 24 VLGSGAFGTVYK----GIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG-S 78
Query: 83 PNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 142
P V RLLG C ++ + +PYG L +R +R + L S+DL ++C
Sbjct: 79 PYVSRLLGICLTST-VQLVTQLMPYGCLLDHVRENRGR------------LGSQDLLNWC 125
Query: 143 YQVARGMQFL 152
Q+A+GM +L
Sbjct: 126 MQIAKGMSYL 135
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 105 VPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGVRD----G 160
+ + L+S LR +R+ + S +T +L +F A+ + +R + D G
Sbjct: 185 IKWMALESILR----RRFTHQSDVWSYGVTVWELMTFG---AKPYDGIPAREIPDLLEKG 237
Query: 161 YRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
RL +P C ++Y IM CW + RP F
Sbjct: 238 ERLPQPPICTIDVYMIMVKCWMIDSECRPRF 268
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 18 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +I + +P+G L ++R + +++ S+ L +
Sbjct: 76 -NPHVCRLLGICLTST-VQLITQLMPFGXLLDYVREHK------------DNIGSQYLLN 121
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 122 WCVQIAKGMNYLEDR 136
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 229 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 266
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 10/145 (6%)
Query: 19 QHIKVFDI-----LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
QHIK DI LGEG FG+V+ E + + +VAVK LK+ R D +E
Sbjct: 10 QHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT-LAARKDFQREA 68
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYY---NNMHGKS 130
++ L H ++V+ G C + +P ++ EY+ +G L FLR+
Sbjct: 69 ELLTNLQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAK 127
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSR 155
L + Q+A GM +L+S+
Sbjct: 128 GELGLSQMLHIASQIASGMVYLASQ 152
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ G LE+P C +E+Y++M CW +EP +R N
Sbjct: 248 ITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNI 282
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 17/148 (11%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S D + +H+K LG+G FG V C + G +VAVK L+ + E R D
Sbjct: 2 SRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE-VVAVKKLQHSTEEHLR-DF 59
Query: 70 LQELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 127
+E+ ++K+L H N+V+ G C + +IMEY+PYG L+ +L+ + +
Sbjct: 60 EREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER------- 111
Query: 128 GKSNSLTSRDLTSFCYQVARGMQFLSSR 155
+ L + Q+ +GM++L ++
Sbjct: 112 -----IDHIKLLQYTSQICKGMEYLGTK 134
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++ RL +PD C E+Y IM CW+ N+RP+F
Sbjct: 246 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 280
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 28 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +I + +P+G L ++R + +++ S+ L +
Sbjct: 86 -NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHK------------DNIGSQYLLN 131
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 132 WCVQIAKGMNYLEDR 146
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 239 SSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKF 276
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 43 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +I + +P+G L ++R + +++ S+ L +
Sbjct: 101 -NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHK------------DNIGSQYLLN 146
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 147 WCVQIAKGMNYLEDR 161
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 254 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 291
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 24 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +I + +P+G L ++R + +++ S+ L +
Sbjct: 82 -NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHK------------DNIGSQYLLN 127
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 128 WCVQIAKGMNYLEDR 142
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 235 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 272
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 20 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +I + +P+G L ++R + +++ S+ L +
Sbjct: 78 -NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHK------------DNIGSQYLLN 123
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 124 WCVQIAKGMNYLEDR 138
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 231 SSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKF 268
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 18 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +I + +P+G L ++R + +++ S+ L +
Sbjct: 76 -NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHK------------DNIGSQYLLN 121
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 122 WCVQIAKGMNYLEDR 136
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 229 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 266
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 20 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +I + +P+G L ++R + +++ S+ L +
Sbjct: 78 -NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHK------------DNIGSQYLLN 123
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 124 WCVQIAKGMNYLEDR 138
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 231 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 268
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +L G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 25 KKIKVLSSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +IM+ +P+G L ++R + +++ S+ L +
Sbjct: 83 -NPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHK------------DNIGSQYLLN 128
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 129 WCVQIAKGMNYLEDR 143
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 236 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 273
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 21 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +I + +P+G L ++R + +++ S+ L +
Sbjct: 79 -NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHK------------DNIGSQYLLN 124
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 125 WCVQIAKGMNYLEDR 139
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 232 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 269
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 12 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +I + +P+G L ++R + +++ S+ L +
Sbjct: 70 -NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHK------------DNIGSQYLLN 115
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 116 WCVQIAKGMNYLEDR 130
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 223 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 260
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 21 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +I + +P+G L ++R + +++ S+ L +
Sbjct: 79 -NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHK------------DNIGSQYLLN 124
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 125 WCVQIAKGMNYLEDR 139
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 232 SSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKF 269
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 25 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +I + +P+G L ++R + +++ S+ L +
Sbjct: 83 -NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHK------------DNIGSQYLLN 128
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 129 WCVQIAKGMNYLEDR 143
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 236 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 273
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 21 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +I + +P+G L ++R + +++ S+ L +
Sbjct: 79 -NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHK------------DNIGSQYLLN 124
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 125 WCVQIAKGMNYLEDR 139
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 232 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 269
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 25 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +I + +P+G L ++R + +++ S+ L +
Sbjct: 83 -NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHK------------DNIGSQYLLN 128
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 129 WCVQIAKGMNYLEDR 143
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 236 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 273
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 18 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +I + +P+G L ++R + +++ S+ L +
Sbjct: 76 -NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHK------------DNIGSQYLLN 121
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 122 WCVQIAKGMNYLEDR 136
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 229 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 266
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 17/146 (11%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D + +H+K LG+G FG V C + G +VAVK L+ + E R D +
Sbjct: 6 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE-VVAVKKLQHSTEEHLR-DFER 63
Query: 72 ELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
E+ ++K+L H N+V+ G C + +IMEY+PYG L+ +L+ + A+R
Sbjct: 64 EIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-AHAER-------- 113
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ L + Q+ +GM++L ++
Sbjct: 114 ---IDHIKLLQYTSQICKGMEYLGTK 136
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++ RL +PD C E+Y IM CW+ N+RP+F
Sbjct: 248 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 282
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 18 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +I + +P+G L ++R + +++ S+ L +
Sbjct: 76 -NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHK------------DNIGSQYLLN 121
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 122 WCVQIAKGMNYLEDR 136
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 229 SSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKF 266
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D + +H+K LG+G FG V C + G +VAVK L+ + E R D +
Sbjct: 2 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE-VVAVKKLQHSTEEHLR-DFER 59
Query: 72 ELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
E+ ++K+L H N+V+ G C + +IMEY+PYG L+ +L+ + +
Sbjct: 60 EIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------- 109
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ L + Q+ +GM++L ++
Sbjct: 110 ---IDHIKLLQYTSQICKGMEYLGTK 132
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++ RL +PD C E+Y IM CW+ N+RP+F
Sbjct: 244 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 278
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D + +H+K LG+G FG V C + G +VAVK L+ + E R D +
Sbjct: 6 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE-VVAVKKLQHSTEEHLR-DFER 63
Query: 72 ELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
E+ ++K+L H N+V+ G C + +IMEY+PYG L+ +L+ + +
Sbjct: 64 EIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------- 113
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ L + Q+ +GM++L ++
Sbjct: 114 ---IDHIKLLQYTSQICKGMEYLGTK 136
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++ RL +PD C E+Y IM CW+ N+RP+F
Sbjct: 248 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 282
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D + +H+K LG+G FG V C + G +VAVK L+ + E R D +
Sbjct: 8 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE-VVAVKKLQHSTEEHLR-DFER 65
Query: 72 ELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
E+ ++K+L H N+V+ G C + +IMEY+PYG L+ +L+ + +
Sbjct: 66 EIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------- 115
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ L + Q+ +GM++L ++
Sbjct: 116 ---IDHIKLLQYTSQICKGMEYLGTK 138
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++ RL +PD C E+Y IM CW+ N+RP+F
Sbjct: 250 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 284
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D + +H+K LG+G FG V C + G +VAVK L+ + E R D +
Sbjct: 10 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE-VVAVKKLQHSTEEHLR-DFER 67
Query: 72 ELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
E+ ++K+L H N+V+ G C + +IMEY+PYG L+ +L+ + +
Sbjct: 68 EIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------- 117
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ L + Q+ +GM++L ++
Sbjct: 118 ---IDHIKLLQYTSQICKGMEYLGTK 140
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++ RL +PD C E+Y IM CW+ N+RP+F
Sbjct: 252 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 286
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D + +H+K LG+G FG V C + G +VAVK L+ + E R D +
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE-VVAVKKLQHSTEEHLR-DFER 60
Query: 72 ELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
E+ ++K+L H N+V+ G C + +IMEY+PYG L+ +L+ + +
Sbjct: 61 EIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------- 110
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ L + Q+ +GM++L ++
Sbjct: 111 ---IDHIKLLQYTSQICKGMEYLGTK 133
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++ RL +PD C E+Y IM CW+ N+RP+F
Sbjct: 245 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 279
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D + +H+K LG+G FG V C + G +VAVK L+ + E R D +
Sbjct: 9 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE-VVAVKKLQHSTEEHLR-DFER 66
Query: 72 ELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
E+ ++K+L H N+V+ G C + +IMEY+PYG L+ +L+ + +
Sbjct: 67 EIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------- 116
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ L + Q+ +GM++L ++
Sbjct: 117 ---IDHIKLLQYTSQICKGMEYLGTK 139
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++ RL +PD C E+Y IM CW+ N+RP+F
Sbjct: 251 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 285
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D + +H+K LG+G FG V C + G +VAVK L+ + E R D +
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE-VVAVKKLQHSTEEHLR-DFER 60
Query: 72 ELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
E+ ++K+L H N+V+ G C + +IMEY+PYG L+ +L+ + +
Sbjct: 61 EIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------- 110
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ L + Q+ +GM++L ++
Sbjct: 111 ---IDHIKLLQYTSQICKGMEYLGTK 133
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++ RL +PD C E+Y IM CW+ N+RP+F
Sbjct: 245 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 279
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D + +H+K LG+G FG V C + G +VAVK L+ + E R D +
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE-VVAVKKLQHSTEEHLR-DFER 60
Query: 72 ELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
E+ ++K+L H N+V+ G C + +IMEY+PYG L+ +L+ + +
Sbjct: 61 EIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------- 110
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ L + Q+ +GM++L ++
Sbjct: 111 ---IDHIKLLQYTSQICKGMEYLGTK 133
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++ RL +PD C E+Y IM CW+ N+RP+F
Sbjct: 245 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 279
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D + +H+K LG+G FG V C + G +VAVK L+ + E R D +
Sbjct: 7 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE-VVAVKKLQHSTEEHLR-DFER 64
Query: 72 ELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
E+ ++K+L H N+V+ G C + +IMEY+PYG L+ +L+ + +
Sbjct: 65 EIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------- 114
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ L + Q+ +GM++L ++
Sbjct: 115 ---IDHIKLLQYTSQICKGMEYLGTK 137
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++ RL +PD C E+Y IM CW+ N+RP+F
Sbjct: 249 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 283
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D + +H+K LG+G FG V C + G +VAVK L+ + E R D +
Sbjct: 1 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE-VVAVKKLQHSTEEHLR-DFER 58
Query: 72 ELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
E+ ++K+L H N+V+ G C + +IMEY+PYG L+ +L+ + +
Sbjct: 59 EIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------- 108
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ L + Q+ +GM++L ++
Sbjct: 109 ---IDHIKLLQYTSQICKGMEYLGTK 131
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++ RL +PD C E+Y IM CW+ N+RP+F
Sbjct: 243 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 277
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D + +H+K LG+G FG V C + G +VAVK L+ + E R D +
Sbjct: 34 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE-VVAVKKLQHSTEEHLR-DFER 91
Query: 72 ELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
E+ ++K+L H N+V+ G C + +IMEY+PYG L+ +L+ + +
Sbjct: 92 EIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--------- 141
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ L + Q+ +GM++L ++
Sbjct: 142 ---IDHIKLLQYTSQICKGMEYLGTK 164
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++ RL +PD C E+Y IM CW+ N+RP+F
Sbjct: 276 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 310
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 17/148 (11%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S + + +H+K LG+G FG V C + G +VAVK L+ + E R D
Sbjct: 19 SHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE-VVAVKKLQHSTEEHLR-DF 76
Query: 70 LQELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 127
+E+ ++K+L H N+V+ G C + +IMEY+PYG L+ +L+ + +
Sbjct: 77 EREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER------- 128
Query: 128 GKSNSLTSRDLTSFCYQVARGMQFLSSR 155
+ L + Q+ +GM++L ++
Sbjct: 129 -----IDHIKLLQYTSQICKGMEYLGTK 151
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++ RL +PD C E+Y IM CW+ N+RP+F
Sbjct: 263 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 297
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 15 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +I + +P+G L ++R + +++ S+ L +
Sbjct: 73 -NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHK------------DNIGSQYLLN 118
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A GM +L R
Sbjct: 119 WCVQIAEGMNYLEDR 133
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 226 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 263
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 17/148 (11%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S + + +H+K LG+G FG V C + G +VAVK L+ + E R D
Sbjct: 19 SHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE-VVAVKKLQHSTEEHLR-DF 76
Query: 70 LQELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 127
+E+ ++K+L H N+V+ G C + +IMEY+PYG L+ +L+ + +
Sbjct: 77 EREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER------- 128
Query: 128 GKSNSLTSRDLTSFCYQVARGMQFLSSR 155
+ L + Q+ +GM++L ++
Sbjct: 129 -----IDHIKLLQYTSQICKGMEYLGTK 151
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++ RL +PD C E+Y IM CW+ N+RP+F
Sbjct: 263 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 297
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 20/154 (12%)
Query: 5 VLNQKSDDKWEVPRQHIKVFDILGEGCFGQV-WKCEALGIDGREGPCIVAVKTLKENAGE 63
VL Q D ++++K LGEG FG+V C DG +VAVK LK +AG
Sbjct: 17 VLFQGPGDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGE--MVAVKALKADAGP 74
Query: 64 RERLDLLQELTVMKTLDPHPNVVRLLGCCTE--KEPFFVIMEYVPYGKLQSFLRSSRAQR 121
+ R QE+ +++TL H ++++ GCC + ++MEYVP G L+ +L
Sbjct: 75 QHRSGWKQEIDILRTLY-HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL------- 126
Query: 122 YYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
+S+ L F Q+ GM +L ++
Sbjct: 127 -------PRHSIGLAQLLLFAQQICEGMAYLHAQ 153
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
G RL +PD C E+Y++M CW+ E + RP F
Sbjct: 267 GERLPRPDKCPAEVYHLMKNCWETEASFRPTF 298
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +L G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 18 KKIKVLSSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +I + +P+G L ++R + +++ S+ L +
Sbjct: 76 -NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHK------------DNIGSQYLLN 121
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 122 WCVQIAKGMNYLEDR 136
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 229 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 266
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +L G FG V+K L I +G + VA+K L+E + ++L E VM ++D
Sbjct: 25 KKIKVLSSGAFGTVYK--GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +I + +P+G L ++R + +++ S+ L +
Sbjct: 83 -NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHK------------DNIGSQYLLN 128
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 129 WCVQIAKGMNYLEDR 143
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 236 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 273
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 17/135 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD 80
K +LG G FG V+K L I +G + VA+ L+E + ++L E VM ++D
Sbjct: 52 KKIKVLGSGAFGTVYK--GLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
+P+V RLLG C +I + +P+G L ++R + +++ S+ L +
Sbjct: 110 -NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHK------------DNIGSQYLLN 155
Query: 141 FCYQVARGMQFLSSR 155
+C Q+A+GM +L R
Sbjct: 156 WCVQIAKGMNYLEDR 170
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 154 SRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
S + G RL +P C ++Y IM CW + + RP F
Sbjct: 263 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF 300
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D + +H+K LG+G FG V C + G +VAVK L+ + E R D +
Sbjct: 6 DPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGE-VVAVKKLQHSTEEHLR-DFER 63
Query: 72 ELTVMKTLDPHPNVVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
E+ ++K+L H N+V+ G C + +IME++PYG L+ +L+ + +
Sbjct: 64 EIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER--------- 113
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ L + Q+ +GM++L ++
Sbjct: 114 ---IDHIKLLQYTSQICKGMEYLGTK 136
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++ RL +PD C E+Y IM CW+ N+RP+F
Sbjct: 248 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 282
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D ++ +K LGEG FG+V C +G VAVK+LK +G DL +
Sbjct: 14 DPTHFEKRFLKRIRDLGEGHFGKVELCR-YDPEGDNTGEQVAVKSLKPESGGNHIADLKK 72
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEK--EPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
E+ +++ L H N+V+ G CTE +IME++P G L+ +L ++
Sbjct: 73 EIEILRNL-YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK----------- 120
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
N + + + Q+ +GM +L SR
Sbjct: 121 -NKINLKQQLKYAVQICKGMDYLGSR 145
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G RL P +C E+Y +M CW+ +P+ R +F
Sbjct: 256 LKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSF 290
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D ++ +K LGEG FG+V C +G VAVK+LK +G DL +
Sbjct: 2 DPTHFEKRFLKRIRDLGEGHFGKVELCR-YDPEGDNTGEQVAVKSLKPESGGNHIADLKK 60
Query: 72 ELTVMKTLDPHPNVVRLLGCCTEK--EPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
E+ +++ L H N+V+ G CTE +IME++P G L+ +L ++
Sbjct: 61 EIEILRNL-YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK----------- 108
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
N + + + Q+ +GM +L SR
Sbjct: 109 -NKINLKQQLKYAVQICKGMDYLGSR 133
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+++G RL P +C E+Y +M CW+ +P+ R +F
Sbjct: 244 LKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSF 278
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 21/140 (15%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
KW + + +G G FG V L D VA+KT++E A E D ++E
Sbjct: 4 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDK------VAIKTIREGAMSEE--DFIEE 55
Query: 73 LTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNS 132
VM L HP +V+L G C E+ P ++ E++ +G L +LR+ R
Sbjct: 56 AEVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL------------ 102
Query: 133 LTSRDLTSFCYQVARGMQFL 152
+ L C V GM +L
Sbjct: 103 FAAETLLGMCLDVCEGMAYL 122
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ G+RL KP +Y IM +CW + P +RP F+
Sbjct: 220 ISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFS 255
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 20/153 (13%)
Query: 6 LNQKSDDKWEVPRQHIKVFDILGEGCFGQV-WKCEALGIDGREGPCIVAVKTLKENAGER 64
+ + D ++++K LGEG FG+V C DG +VAVK LK + G +
Sbjct: 1 MGSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGE--MVAVKALKADCGPQ 58
Query: 65 ERLDLLQELTVMKTLDPHPNVVRLLGCCTEK--EPFFVIMEYVPYGKLQSFLRSSRAQRY 122
R QE+ +++TL H ++++ GCC ++ + ++MEYVP G L+ +L
Sbjct: 59 HRSGWKQEIDILRTLY-HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-------- 109
Query: 123 YNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
+S+ L F Q+ GM +L S+
Sbjct: 110 ------PRHSIGLAQLLLFAQQICEGMAYLHSQ 136
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
G RL +PD C E+Y++M CW+ E + RP F
Sbjct: 250 GERLPRPDKCPCEVYHLMKNCWETEASFRPTF 281
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 21/140 (15%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
KW + + +G G FG V L D VA+KT++E A E D ++E
Sbjct: 2 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDK------VAIKTIREGAMSEE--DFIEE 53
Query: 73 LTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNS 132
VM L HP +V+L G C E+ P ++ E++ +G L +LR+ R
Sbjct: 54 AEVMMKLS-HPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGL------------ 100
Query: 133 LTSRDLTSFCYQVARGMQFL 152
+ L C V GM +L
Sbjct: 101 FAAETLLGMCLDVCEGMAYL 120
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ G+RL KP +Y IM +CW + P +RP F+
Sbjct: 218 ISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFS 253
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 29/146 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQV----WKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
WE+ + + LG G FG V W+ G VA+K +KE G +
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWR----------GQYDVAIKMIKE--GSMSEDEF 51
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
++E VM L H +V+L G CT++ P F+I EY+ G L ++LR R
Sbjct: 52 IEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR----------- 99
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ ++ L C V M++L S+
Sbjct: 100 -HRFQTQQLLEMCKDVCEAMEYLESK 124
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 153 SSRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
++ + G RL +P ++Y IMY CW ++ +ERP F
Sbjct: 215 TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 253
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 29/158 (18%)
Query: 2 NDPVLNQKSDDKWEVPRQHIKVFDILGEGCFGQV----WKCEALGIDGREGPCIVAVKTL 57
N P WE+ + + LG G FG V W+ G VA+K +
Sbjct: 7 NAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWR----------GQYDVAIKMI 56
Query: 58 KENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSS 117
KE G + ++E VM L H +V+L G CT++ P F+I EY+ G L ++LR
Sbjct: 57 KE--GSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM 113
Query: 118 RAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
R + ++ L C V M++L S+
Sbjct: 114 R------------HRFQTQQLLEMCKDVCEAMEYLESK 139
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 153 SSRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
++ + G RL +P ++Y IMY CW ++ +ERP F
Sbjct: 230 TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 268
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 29/158 (18%)
Query: 2 NDPVLNQKSDDKWEVPRQHIKVFDILGEGCFGQV----WKCEALGIDGREGPCIVAVKTL 57
N P WE+ + + LG G FG V W+ G VA+K +
Sbjct: 7 NAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWR----------GQYDVAIKMI 56
Query: 58 KENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSS 117
KE G + ++E VM L H +V+L G CT++ P F+I EY+ G L ++LR
Sbjct: 57 KE--GSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM 113
Query: 118 RAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
R + ++ L C V M++L S+
Sbjct: 114 R------------HRFQTQQLLEMCKDVCEAMEYLESK 139
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 153 SSRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
++ + G RL +P ++Y IMY CW ++ +ERP F
Sbjct: 230 TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 268
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 29/146 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQV----WKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
WE+ + + LG G FG V W+ G VA+K +KE G +
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYGKWR----------GQYDVAIKMIKE--GSMSEDEF 50
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
++E VM L H +V+L G CT++ P F+I EY+ G L ++LR R
Sbjct: 51 IEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR----------- 98
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ ++ L C V M++L S+
Sbjct: 99 -HRFQTQQLLEMCKDVCEAMEYLESK 123
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 153 SSRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
++ + G RL +P ++Y IMY CW ++ +ERP F
Sbjct: 214 TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 252
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 29/146 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQV----WKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
WE+ + + LG G FG V W+ G VA+K +KE G +
Sbjct: 10 WEIDPKDLTFLKELGTGQFGVVKYGKWR----------GQYDVAIKMIKE--GSMSEDEF 57
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
++E VM L H +V+L G CT++ P F+I EY+ G L ++LR R
Sbjct: 58 IEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR----------- 105
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ ++ L C V M++L S+
Sbjct: 106 -HRFQTQQLLEMCKDVCEAMEYLESK 130
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 153 SSRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
++ + G RL +P ++Y IMY CW ++ +ERP F
Sbjct: 221 TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 259
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 29/146 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQV----WKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
WE+ + + LG G FG V W+ G VA+K +KE G +
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWR----------GQYDVAIKMIKE--GSMSEDEF 51
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGK 129
++E VM L H +V+L G CT++ P F+I EY+ G L ++LR R
Sbjct: 52 IEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR----------- 99
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSR 155
+ ++ L C V M++L S+
Sbjct: 100 -HRFQTQQLLEMCKDVCEAMEYLESK 124
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 153 SSRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
++ + G RL +P ++Y IMY CW ++ +ERP F
Sbjct: 215 TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 253
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 20/153 (13%)
Query: 6 LNQKSDDKWEVPRQHIKVFDILGEGCFGQV-WKCEALGIDGREGPCIVAVKTLKENAGER 64
+ + D ++++K LGEG FG+V C DG +VAVK LK + G +
Sbjct: 1 MGSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGE--MVAVKALKADCGPQ 58
Query: 65 ERLDLLQELTVMKTLDPHPNVVRLLGCCTEK--EPFFVIMEYVPYGKLQSFLRSSRAQRY 122
R QE+ +++TL H ++++ GCC ++ + ++MEYVP G L+ +L
Sbjct: 59 HRSGWKQEIDILRTLY-HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-------- 109
Query: 123 YNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
+S+ L F Q+ GM +L ++
Sbjct: 110 ------PRHSIGLAQLLLFAQQICEGMAYLHAQ 136
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
G RL +PD C E+Y++M CW+ E + RP F
Sbjct: 250 GERLPRPDKCPCEVYHLMKNCWETEASFRPTF 281
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 21/131 (16%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+G G FG V L D VA+KT++E A E D ++E VM L HP +V
Sbjct: 15 IGSGQFGLVHLGYWLNKDK------VAIKTIREGAMSEE--DFIEEAEVMMKLS-HPKLV 65
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+L G C E+ P ++ E++ +G L +LR+ R + L C V
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL------------FAAETLLGMCLDVC 113
Query: 147 RGMQFLSSRGV 157
GM +L V
Sbjct: 114 EGMAYLEEASV 124
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ G+RL KP +Y IM +CW + P +RP F+
Sbjct: 217 ISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFS 252
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 16/131 (12%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNV 85
++G+G FG V+ E ID + A+K+L ++ L+E +M+ L+ HPNV
Sbjct: 28 VIGKGHFGVVYHGEY--IDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLN-HPNV 84
Query: 86 VRLLGCCTEKEPF-FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQ 144
+ L+G E V++ Y+ +G L F+RS + + T +DL SF Q
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ------------RNPTVKDLISFGLQ 132
Query: 145 VARGMQFLSSR 155
VARGM++L+ +
Sbjct: 133 VARGMEYLAEQ 143
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
G RL +P++C LY +M CW+ +P RP F
Sbjct: 244 GRRLPQPEYCPDSLYQVMQQCWEADPAVRPTF 275
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 23/136 (16%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKT 78
+ I+V +++G G FG V K + D VA+K ++ E ER + EL +
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKD-------VAIKQIES---ESERKAFIVELRQLSR 57
Query: 79 LDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDL 138
++ HPN+V+L G C P ++MEY G L + L + YY H
Sbjct: 58 VN-HPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHA---------- 104
Query: 139 TSFCYQVARGMQFLSS 154
S+C Q ++G+ +L S
Sbjct: 105 MSWCLQCSQGVAYLHS 120
Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 148 GMQFLSSRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
G F V +G R + + + ++M CW K+P++RP+
Sbjct: 208 GPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSM 251
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 23/136 (16%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKT 78
+ I+V +++G G FG V K + D VA+K ++ E ER + EL +
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRAKD-------VAIKQIES---ESERKAFIVELRQLSR 58
Query: 79 LDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDL 138
++ HPN+V+L G C P ++MEY G L + L + YY H
Sbjct: 59 VN-HPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHA---------- 105
Query: 139 TSFCYQVARGMQFLSS 154
S+C Q ++G+ +L S
Sbjct: 106 MSWCLQCSQGVAYLHS 121
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 148 GMQFLSSRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
G F V +G R + + + ++M CW K+P++RP+
Sbjct: 209 GPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSM 252
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 19/133 (14%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
++LG+GCFGQ A+ + RE ++ +K L E +R L+E+ VM+ L+ HPN
Sbjct: 16 EVLGKGCFGQ-----AIKVTHRETGEVMVMKELIRFDEETQR-TFLKEVKVMRCLE-HPN 68
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQ 144
V++ +G + + I EY+ G L+ ++S +Q ++ SF
Sbjct: 69 VLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQR------------VSFAKD 116
Query: 145 VARGMQFLSSRGV 157
+A GM +L S +
Sbjct: 117 IASGMAYLHSMNI 129
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 145 VARGMQF-LSSRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ R M F L+ RG D Y P +C + I C D +P +RP+F
Sbjct: 226 LPRTMDFGLNVRGFLDRY---CPPNCPPSFFPITVRCCDLDPEKRPSFV 271
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 21/126 (16%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+G G FG V L D VA+KT++E A E D ++E VM L HP +V
Sbjct: 15 IGSGQFGLVHLGYWLNKDK------VAIKTIREGAMSEE--DFIEEAEVMMKLS-HPKLV 65
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+L G C E+ P ++ E++ +G L +LR+ R + L C V
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL------------FAAETLLGMCLDVC 113
Query: 147 RGMQFL 152
GM +L
Sbjct: 114 EGMAYL 119
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ G+RL KP +Y IM +CW + P +RP F+
Sbjct: 217 ISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFS 252
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 21/126 (16%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+G G FG V L D VA+KT++E A E D ++E VM L HP +V
Sbjct: 13 IGSGQFGLVHLGYWLNKDK------VAIKTIREGAMSEE--DFIEEAEVMMKLS-HPKLV 63
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+L G C E+ P ++ E++ +G L +LR+ R + L C V
Sbjct: 64 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL------------FAAETLLGMCLDVC 111
Query: 147 RGMQFL 152
GM +L
Sbjct: 112 EGMAYL 117
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ G+RL KP +Y IM +CW + P +RP F+
Sbjct: 215 ISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFS 250
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 21/126 (16%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+G G FG V L D VA+KT+KE G D ++E VM L HP +V
Sbjct: 35 IGSGQFGLVHLGYWLNKDK------VAIKTIKE--GSMSEDDFIEEAEVMMKLS-HPKLV 85
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+L G C E+ P ++ E++ +G L +LR+ R + L C V
Sbjct: 86 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL------------FAAETLLGMCLDVC 133
Query: 147 RGMQFL 152
GM +L
Sbjct: 134 EGMAYL 139
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ G+RL KP +Y IM +CW + P +RP F+
Sbjct: 237 ISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFS 272
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKT 78
+H+K LG+G FG V C + G +VAVK L+ + +++R D +E+ ++K
Sbjct: 10 RHLKYISQLGKGNFGSVELCRYDPLGDNTG-ALVAVKQLQHSGPDQQR-DFQREIQILKA 67
Query: 79 LDPHPNVV---RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTS 135
L H + + R + ++ ++MEY+P G L+ FL+ RA+ L +
Sbjct: 68 L--HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR------------LDA 113
Query: 136 RDLTSFCYQVARGMQFLSSR 155
L + Q+ +GM++L SR
Sbjct: 114 SRLLLYSSQICKGMEYLGSR 133
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL P C E++ +M CW P +RP+F+
Sbjct: 247 GQRLPAPPACPAEVHELMKLCWAPSPQDRPSFS 279
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKT 78
+H+K LG+G FG V C + G +VAVK L+ + +++R D +E+ ++K
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTG-ALVAVKQLQHSGPDQQR-DFQREIQILKA 80
Query: 79 LDPHPNVV---RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTS 135
L H + + R + ++ ++MEY+P G L+ FL+ RA+ L +
Sbjct: 81 L--HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR------------LDA 126
Query: 136 RDLTSFCYQVARGMQFLSSR 155
L + Q+ +GM++L SR
Sbjct: 127 SRLLLYSSQICKGMEYLGSR 146
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL P C E++ +M CW P +RP+F+
Sbjct: 260 GQRLPAPPACPAEVHELMKLCWAPSPQDRPSFS 292
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 29/133 (21%)
Query: 27 LGEGCFGQV----WKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPH 82
LG G FG V W+ G VA+K +KE G + ++E VM L H
Sbjct: 12 LGTGQFGVVKYGKWR----------GQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLS-H 58
Query: 83 PNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 142
+V+L G CT++ P F+I EY+ G L ++LR R + ++ L C
Sbjct: 59 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR------------HRFQTQQLLEMC 106
Query: 143 YQVARGMQFLSSR 155
V M++L S+
Sbjct: 107 KDVCEAMEYLESK 119
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 153 SSRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
++ + G RL +P ++Y IMY CW ++ +ERP F
Sbjct: 210 TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 248
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKT 78
+H+K LG+G FG V C + G +VAVK L+ + +++R D +E+ ++K
Sbjct: 11 RHLKYISQLGKGNFGSVELCRYDPLGDNTG-ALVAVKQLQHSGPDQQR-DFQREIQILKA 68
Query: 79 LDPHPNVV---RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTS 135
L H + + R + ++ ++MEY+P G L+ FL+ RA+ L +
Sbjct: 69 L--HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR------------LDA 114
Query: 136 RDLTSFCYQVARGMQFLSSR 155
L + Q+ +GM++L SR
Sbjct: 115 SRLLLYSSQICKGMEYLGSR 134
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL P C E++ +M CW P +RP+F+
Sbjct: 248 GQRLPAPPACPAEVHELMKLCWAPSPQDRPSFS 280
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 6 LNQKSDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERE 65
L +K +D +P Q + +LG+G FG V + + DG VAVK LK +
Sbjct: 11 LKEKLEDVL-IPEQQFTLGRMLGKGEFGSVREAQLKQEDG--SFVKVAVKMLKADIIASS 67
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKE-----PF-FVIMEYVPYGKLQSFLRSSR 118
++ L+E MK D HP+V +L+G P VI+ ++ +G L +FL +SR
Sbjct: 68 DIEEFLREAACMKEFD-HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASR 126
Query: 119 AQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
N L + L F +A GM++LSSR
Sbjct: 127 IGENPFN-------LPLQTLVRFMVDIACGMEYLSSR 156
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL++P C E+Y++MY CW +P +RP+FT
Sbjct: 255 GNRLKQPPECMEEVYDLMYQCWSADPKQRPSFT 287
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 20/141 (14%)
Query: 18 RQHIKVFDILGEGCFGQV-WKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
++++K LGEG FG+V C DG +VAVK LKE G + R +E+ ++
Sbjct: 7 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGE--MVAVKALKEGCGPQLRSGWQREIEIL 64
Query: 77 KTLDPHPNVVRLLGCCTEK--EPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLT 134
+TL H ++V+ GCC ++ + ++MEYVP G L+ +L + +
Sbjct: 65 RTLY-HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--------------PRHCVG 109
Query: 135 SRDLTSFCYQVARGMQFLSSR 155
L F Q+ GM +L ++
Sbjct: 110 LAQLLLFAQQICEGMAYLHAQ 130
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
G RL +PD C E+Y++M CW+ E + RP F
Sbjct: 244 GERLPRPDRCPCEIYHLMKNCWETEASFRPTF 275
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 20/147 (13%)
Query: 11 DDKWEVPRQHIKVFDI-LGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLD 68
D K + R ++ + DI LG G FG V + G+ R+ VA+K LK+ + + +
Sbjct: 1 DKKLFLKRDNLLIADIELGCGNFGSVRQ----GVYRMRKKQIDVAIKVLKQGTEKADTEE 56
Query: 69 LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHG 128
+++E +M LD +P +VRL+G C + E ++ME G L FL G
Sbjct: 57 MMREAQIMHQLD-NPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLV------------G 102
Query: 129 KSNSLTSRDLTSFCYQVARGMQFLSSR 155
K + ++ +QV+ GM++L +
Sbjct: 103 KREEIPVSNVAELLHQVSMGMKYLEEK 129
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ G R+E P C ELY +M CW + +RP+F
Sbjct: 226 IEQGKRMECPPECPPELYALMSDCWIYKWEDRPDF 260
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 20/141 (14%)
Query: 18 RQHIKVFDILGEGCFGQV-WKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
++++K LGEG FG+V C DG +VAVK LKE G + R +E+ ++
Sbjct: 8 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGE--MVAVKALKEGCGPQLRSGWQREIEIL 65
Query: 77 KTLDPHPNVVRLLGCCTEK--EPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLT 134
+TL H ++V+ GCC ++ + ++MEYVP G L+ +L + +
Sbjct: 66 RTLY-HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--------------PRHCVG 110
Query: 135 SRDLTSFCYQVARGMQFLSSR 155
L F Q+ GM +L ++
Sbjct: 111 LAQLLLFAQQICEGMAYLHAQ 131
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
G RL +PD C E+Y++M CW+ E + RP F
Sbjct: 245 GERLPRPDRCPCEIYHLMKNCWETEASFRPTF 276
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 20/147 (13%)
Query: 11 DDKWEVPRQHIKVFDI-LGEGCFGQVWKCEALGI-DGREGPCIVAVKTLKENAGERERLD 68
D K + R ++ + DI LG G FG V + G+ R+ VA+K LK+ + + +
Sbjct: 327 DKKLFLKRDNLLIADIELGCGNFGSVRQ----GVYRMRKKQIDVAIKVLKQGTEKADTEE 382
Query: 69 LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHG 128
+++E +M LD +P +VRL+G C + E ++ME G L FL G
Sbjct: 383 MMREAQIMHQLD-NPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLV------------G 428
Query: 129 KSNSLTSRDLTSFCYQVARGMQFLSSR 155
K + ++ +QV+ GM++L +
Sbjct: 429 KREEIPVSNVAELLHQVSMGMKYLEEK 455
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
+ G R+E P C ELY +M CW + +RP+F
Sbjct: 552 IEQGKRMECPPECPPELYALMSDCWIYKWEDRPDF 586
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
+ILG G FGQV KCE + I+ + G +++ ++ E++VM LD H N
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTR------GMKDKEEVKNEISVMNQLD-HAN 147
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQ 144
+++L K ++MEYV G+L ++ + +S +LT D F Q
Sbjct: 148 LIQLYDAFESKNDIVLVMEYVDGGEL------------FDRIIDESYNLTELDTILFMKQ 195
Query: 145 VARGMQFL 152
+ G++ +
Sbjct: 196 ICEGIRHM 203
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 19/140 (13%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKT 78
+H+K LG+G FG V C + G +VAVK L+ + +++R D +E+ ++K
Sbjct: 7 RHLKYISQLGKGNFGSVELCRYDPLGDNTG-ALVAVKQLQHSGPDQQR-DFQREIQILKA 64
Query: 79 LDPHPNVV---RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTS 135
L H + + R + + ++MEY+P G L+ FL+ RA+ L +
Sbjct: 65 L--HSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR------------LDA 110
Query: 136 RDLTSFCYQVARGMQFLSSR 155
L + Q+ +GM++L SR
Sbjct: 111 SRLLLYSSQICKGMEYLGSR 130
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 160 GYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
G RL P C E++ +M CW P +RP+F+
Sbjct: 244 GQRLPAPPACPAEVHELMKLCWAPSPQDRPSFS 276
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 19/141 (13%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
P + ++ LG+G FG+V+K + +E + A K + E E E D + E+ ++
Sbjct: 17 PNEVWEIVGELGDGAFGKVYKAK-----NKETGALAAAKVI-ETKSEEELEDYIVEIEIL 70
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR 136
T D HP +V+LLG ++++E+ P G + + M LT
Sbjct: 71 ATCD-HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAI------------MLELDRGLTEP 117
Query: 137 DLTSFCYQVARGMQFLSSRGV 157
+ C Q+ + FL S+ +
Sbjct: 118 QIQVVCRQMLEALNFLHSKRI 138
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 19/141 (13%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
P + ++ LG+G FG+V+K + +E + A K + E E E D + E+ ++
Sbjct: 9 PNEVWEIVGELGDGAFGKVYKAK-----NKETGALAAAKVI-ETKSEEELEDYIVEIEIL 62
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR 136
T D HP +V+LLG ++++E+ P G + + M LT
Sbjct: 63 ATCD-HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAI------------MLELDRGLTEP 109
Query: 137 DLTSFCYQVARGMQFLSSRGV 157
+ C Q+ + FL S+ +
Sbjct: 110 QIQVVCRQMLEALNFLHSKRI 130
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 21/140 (15%)
Query: 21 IKVFDILGEGCFGQVWKCEALGIDGREGPCI---VAVKTLKENAGERERLDLLQELTVMK 77
++ +LG G FG V K G+ EG I V +K +++ +G + + + +
Sbjct: 33 LRKLKVLGSGVFGTVHK----GVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIG 88
Query: 78 TLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRD 137
+LD H ++VRLLG C ++ +Y+P G L +R R +L +
Sbjct: 89 SLD-HAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVRQHRG------------ALGPQL 134
Query: 138 LTSFCYQVARGMQFLSSRGV 157
L ++ Q+A+GM +L G+
Sbjct: 135 LLNWGVQIAKGMYYLEEHGM 154
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 114 LRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGVRD-GYRLEKPDHCRRE 172
L S +Y + S +T +L +F + G++ + + G RL +P C +
Sbjct: 204 LESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTID 263
Query: 173 LYNIMYYCWDKEPNERPNF 191
+Y +M CW + N RP F
Sbjct: 264 VYMVMVKCWMIDENIRPTF 282
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 21/140 (15%)
Query: 21 IKVFDILGEGCFGQVWKCEALGIDGREGPCI---VAVKTLKENAGERERLDLLQELTVMK 77
++ +LG G FG V K G+ EG I V +K +++ +G + + + +
Sbjct: 15 LRKLKVLGSGVFGTVHK----GVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIG 70
Query: 78 TLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRD 137
+LD H ++VRLLG C ++ +Y+P G L +R R +L +
Sbjct: 71 SLD-HAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVRQHR------------GALGPQL 116
Query: 138 LTSFCYQVARGMQFLSSRGV 157
L ++ Q+A+GM +L G+
Sbjct: 117 LLNWGVQIAKGMYYLEEHGM 136
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 114 LRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGVRD-GYRLEKPDHCRRE 172
L S +Y + S +T +L +F + G++ + + G RL +P C +
Sbjct: 186 LESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTID 245
Query: 173 LYNIMYYCWDKEPNERPNF 191
+Y +M CW + N RP F
Sbjct: 246 VYMVMVKCWMIDENIRPTF 264
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 23/152 (15%)
Query: 7 NQKSDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERER 66
++ S D WE+P I V +G G FG V+K + G VAVK L A ++
Sbjct: 12 SRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQ 63
Query: 67 LDLLQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 125
L + E+ V++ H N++ +G T K ++ ++ L Y++
Sbjct: 64 LQAFKNEVGVLRKTR-HVNILLFMGYST-KPQLAIVTQWCEGSSL------------YHH 109
Query: 126 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
+H + L Q ARGM +L ++ +
Sbjct: 110 LHASETKFEMKKLIDIARQTARGMDYLHAKSI 141
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 23/149 (15%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S D WE+P I V +G G FG V+K + G VAVK L A ++L
Sbjct: 3 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQA 54
Query: 70 LQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHG 128
+ E+ V++ H N++ +G T K ++ ++ L Y+++H
Sbjct: 55 FKNEVGVLRKTR-HVNILLFMGYST-KPQLAIVTQWCEGSSL------------YHHLHA 100
Query: 129 KSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
+ L Q ARGM +L ++ +
Sbjct: 101 SETKFEMKKLIDIARQTARGMDYLHAKSI 129
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 18/142 (12%)
Query: 16 VPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERL--DLLQEL 73
+ + +++ + LG+G FG V + E G+ VAVK LK + + D ++E+
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKT--VSVAVKCLKPDVLSQPEAMDDFIREV 72
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSL 133
M +LD H N++RL G P ++ E P G L LR +
Sbjct: 73 NAMHSLD-HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGT-------- 122
Query: 134 TSRDLTSFCYQVARGMQFLSSR 155
L+ + QVA GM +L S+
Sbjct: 123 ----LSRYAVQVAEGMGYLESK 140
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 158 RDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
++G RL +P+ C +++YN+M CW +P +RP F
Sbjct: 239 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 273
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 18/142 (12%)
Query: 16 VPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERL--DLLQEL 73
+ + +++ + LG+G FG V + E G+ VAVK LK + + D ++E+
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKT--VSVAVKCLKPDVLSQPEAMDDFIREV 72
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSL 133
M +LD H N++RL G P ++ E P G L LR +
Sbjct: 73 NAMHSLD-HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGT-------- 122
Query: 134 TSRDLTSFCYQVARGMQFLSSR 155
L+ + QVA GM +L S+
Sbjct: 123 ----LSRYAVQVAEGMGYLESK 140
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 158 RDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
++G RL +P+ C +++YN+M CW +P +RP F
Sbjct: 239 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 273
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 18/142 (12%)
Query: 16 VPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERL--DLLQEL 73
+ + +++ + LG+G FG V + E G+ VAVK LK + + D ++E+
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKT--VSVAVKCLKPDVLSQPEAMDDFIREV 66
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSL 133
M +LD H N++RL G P ++ E P G L LR +
Sbjct: 67 NAMHSLD-HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGT-------- 116
Query: 134 TSRDLTSFCYQVARGMQFLSSR 155
L+ + QVA GM +L S+
Sbjct: 117 ----LSRYAVQVAEGMGYLESK 134
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 158 RDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
++G RL +P+ C +++YN+M CW +P +RP F
Sbjct: 233 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 267
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 18/137 (13%)
Query: 21 IKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERL--DLLQELTVMKT 78
+++ + LG+G FG V + E G+ VAVK LK + + D ++E+ M +
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKT--VSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 79 LDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDL 138
LD H N++RL G P ++ E P G L LR + L
Sbjct: 68 LD-HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGT------------L 113
Query: 139 TSFCYQVARGMQFLSSR 155
+ + QVA GM +L S+
Sbjct: 114 SRYAVQVAEGMGYLESK 130
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 158 RDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
++G RL +P+ C +++YN+M CW +P +RP F
Sbjct: 229 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 263
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 18/137 (13%)
Query: 21 IKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERL--DLLQELTVMKT 78
+++ + LG+G FG V + E G+ VAVK LK + + D ++E+ M +
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKT--VSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 79 LDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDL 138
LD H N++RL G P ++ E P G L LR + L
Sbjct: 68 LD-HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGT------------L 113
Query: 139 TSFCYQVARGMQFLSSR 155
+ + QVA GM +L S+
Sbjct: 114 SRYAVQVAEGMGYLESK 130
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 158 RDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
++G RL +P+ C +++YN+M CW +P +RP F
Sbjct: 229 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 263
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 18/137 (13%)
Query: 21 IKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERL--DLLQELTVMKT 78
+++ + LG+G FG V + E G+ VAVK LK + + D ++E+ M +
Sbjct: 14 LRLLEKLGDGSFGVVRRGEWDAPSGKT--VSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 79 LDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDL 138
LD H N++RL G P ++ E P G L LR + L
Sbjct: 72 LD-HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGT------------L 117
Query: 139 TSFCYQVARGMQFLSSR 155
+ + QVA GM +L S+
Sbjct: 118 SRYAVQVAEGMGYLESK 134
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 158 RDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
++G RL +P+ C +++YN+M CW +P +RP F
Sbjct: 233 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 267
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 20/138 (14%)
Query: 21 IKVFDILGEGCFGQVWKCEALGIDGREGPCI-VAVKTLKENAGERERL--DLLQELTVMK 77
+++ + LG+G FG V + E D G + VAVK LK + + D ++E+ M
Sbjct: 10 LRLLEKLGDGSFGVVRRGEW---DAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMH 66
Query: 78 TLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRD 137
+LD H N++RL G P ++ E P G L LR +
Sbjct: 67 SLD-HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGT------------ 112
Query: 138 LTSFCYQVARGMQFLSSR 155
L+ + QVA GM +L S+
Sbjct: 113 LSRYAVQVAEGMGYLESK 130
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 158 RDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
++G RL +P+ C +++YN+M CW +P +RP F
Sbjct: 229 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 263
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 74/154 (48%), Gaps = 24/154 (15%)
Query: 2 NDPVLNQKSDDKWEVPRQHIKVFDIL---GEGCFGQVWKCEALGIDGREGPCIVAVKTLK 58
N P K D+ + +Q +VFD+L GEG +G V+K +E IVA+K +
Sbjct: 9 NPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKA-----IHKETGQIVAIKQV- 62
Query: 59 ENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSR 118
E + ++++E+++M+ D P+VV+ G + +++MEY G + +R
Sbjct: 63 --PVESDLQEIIKEISIMQQCD-SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRL-- 117
Query: 119 AQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFL 152
++ +LT ++ + +G+++L
Sbjct: 118 ----------RNKTLTEDEIATILQSTLKGLEYL 141
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 23/152 (15%)
Query: 7 NQKSDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERER 66
++ + D WE+P I V +G G FG V+K + G VAVK L A ++
Sbjct: 12 SRDAADDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQ 63
Query: 67 LDLLQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNN 125
L + E+ V++ H N++ +G T + ++ ++ L Y++
Sbjct: 64 LQAFKNEVGVLRKTR-HVNILLFMGYSTAPQ-LAIVTQWCEGSSL------------YHH 109
Query: 126 MHGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
+H + L Q ARGM +L ++ +
Sbjct: 110 LHASETKFEMKKLIDIARQTARGMDYLHAKSI 141
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
W + + +K+ +G+G FG V + G VAVK +K +A + L E
Sbjct: 16 WALNMKELKLLQTIGKGEFGDVMLGDYRGNK-------VAVKCIKNDATAQA---FLAEA 65
Query: 74 TVMKTLDPHPNVVRLLGCCTE-KEPFFVIMEYVPYGKLQSFLRS 116
+VM L H N+V+LLG E K +++ EY+ G L +LRS
Sbjct: 66 SVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS 108
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GY+++ PD C +Y +M CW + RP+F
Sbjct: 227 VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSF 261
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
W + + +K+ +G+G FG V + G VAVK +K +A + L E
Sbjct: 188 WALNMKELKLLQTIGKGEFGDVMLGDYRGNK-------VAVKCIKNDATAQA---FLAEA 237
Query: 74 TVMKTLDPHPNVVRLLGCCTE-KEPFFVIMEYVPYGKLQSFLRS 116
+VM L H N+V+LLG E K +++ EY+ G L +LRS
Sbjct: 238 SVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS 280
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GY+++ PD C +Y++M CW + RP F
Sbjct: 399 VEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTF 433
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
W + + +K+ +G+G FG V + G VAVK +K +A + L E
Sbjct: 1 WALNMKELKLLQTIGKGEFGDVMLGDYRGNK-------VAVKCIKNDATAQA---FLAEA 50
Query: 74 TVMKTLDPHPNVVRLLGCCTE-KEPFFVIMEYVPYGKLQSFLRS 116
+VM L H N+V+LLG E K +++ EY+ G L +LRS
Sbjct: 51 SVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS 93
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GY+++ PD C +Y +M CW + RP+F
Sbjct: 212 VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSF 246
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LG G F V KC + + + K + R D+ +E++++K + HPNV+
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVI 77
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
L K +I+E V G+L FL + SLT + T F Q+
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL-------------AEKESLTEEEATEFLKQIL 124
Query: 147 RGMQFLSS 154
G+ +L S
Sbjct: 125 NGVYYLHS 132
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
W + + +K+ +G+G FG V + G VAVK +K +A + L E
Sbjct: 7 WALNMKELKLLQTIGKGEFGDVMLGDYRGNK-------VAVKCIKNDATAQA---FLAEA 56
Query: 74 TVMKTLDPHPNVVRLLGCCTE-KEPFFVIMEYVPYGKLQSFLRS 116
+VM L H N+V+LLG E K +++ EY+ G L +LRS
Sbjct: 57 SVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS 99
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNF 191
V GY+++ PD C +Y +M CW + RP+F
Sbjct: 218 VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSF 252
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 21/152 (13%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGER-ERLDLLQELTVMK 77
Q ++ LG G FG+V I R A+K LK+ R ++++ + +M
Sbjct: 6 QDFQILRTLGTGSFGRVHL-----IRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLML 60
Query: 78 TLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRD 137
++ HP ++R+ G + + F+IM+Y+ G+L S LR S QR+ N +
Sbjct: 61 SIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPV----------- 107
Query: 138 LTSFCYQVARGMQFLSSRGVRDGYRLEKPDHC 169
+ +V +++L S+ + YR KP++
Sbjct: 108 AKFYAAEVCLALEYLHSKDII--YRDLKPENI 137
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LG G F V KC + + + K + R D+ +E++++K + HPNV+
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVI 76
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
L K +I+E V G+L FL + SLT + T F Q+
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFL-------------AEKESLTEEEATEFLKQIL 123
Query: 147 RGMQFLSS 154
G+ +L S
Sbjct: 124 NGVYYLHS 131
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LG G F V KC + + + K + R D+ +E++++K + HPNV+
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVI 76
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
L K +I+E V G+L FL + SLT + T F Q+
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFL-------------AEKESLTEEEATEFLKQIL 123
Query: 147 RGMQFLSS 154
G+ +L S
Sbjct: 124 NGVYYLHS 131
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LG G F V KC + + + K + R D+ +E++++K + HPNV+
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVI 77
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
L K +I+E V G+L FL + SLT + T F Q+
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL-------------AEKESLTEEEATEFLKQIL 124
Query: 147 RGMQFLSS 154
G+ +L S
Sbjct: 125 NGVYYLHS 132
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LG G F V KC + + + K + R D+ +E++++K + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVI 77
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
L K +I+E V G+L FL + SLT + T F Q+
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL-------------AEKESLTEEEATEFLKQIL 124
Query: 147 RGMQFLSS 154
G+ +L S
Sbjct: 125 NGVYYLHS 132
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LG G F V KC + + + K + R D+ +E++++K + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVI 77
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
L K +I+E V G+L FL + SLT + T F Q+
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL-------------AEKESLTEEEATEFLKQIL 124
Query: 147 RGMQFLSS 154
G+ +L S
Sbjct: 125 NGVYYLHS 132
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LG G F V KC + + + K + R D+ +E++++K + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVI 77
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
L K +I+E V G+L FL + SLT + T F Q+
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL-------------AEKESLTEEEATEFLKQIL 124
Query: 147 RGMQFLSS 154
G+ +L S
Sbjct: 125 NGVYYLHS 132
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LG G F V KC + + + K + R D+ +E++++K + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVI 77
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
L K +I+E V G+L FL + SLT + T F Q+
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL-------------AEKESLTEEEATEFLKQIL 124
Query: 147 RGMQFLSS 154
G+ +L S
Sbjct: 125 NGVYYLHS 132
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LG G F V KC + + + K + R D+ +E++++K + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVI 77
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
L K +I+E V G+L FL + SLT + T F Q+
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL-------------AEKESLTEEEATEFLKQIL 124
Query: 147 RGMQFLSS 154
G+ +L S
Sbjct: 125 NGVYYLHS 132
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LG G F V KC + + + K + R D+ +E++++K + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVI 77
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
L K +I+E V G+L FL + SLT + T F Q+
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL-------------AEKESLTEEEATEFLKQIL 124
Query: 147 RGMQFLSS 154
G+ +L S
Sbjct: 125 NGVYYLHS 132
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERERLDLLQELTVMKTLDPHPN 84
+LG+G FG+V KC+ R AVK + K +A ++ +L+E+ ++K LD HPN
Sbjct: 29 MLGKGSFGEVLKCK-----DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD-HPN 82
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
+++L + F+++ E G+L
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGEL 108
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LG G F V KC + + + K + R D+ +E++++K + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVI 77
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
L K +I+E V G+L FL + SLT + T F Q+
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL-------------AEKESLTEEEATEFLKQIL 124
Query: 147 RGMQFLSS 154
G+ +L S
Sbjct: 125 NGVYYLHS 132
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LG G F V KC + + + K + R D+ +E++++K + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVI 77
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
L K +I+E V G+L FL + SLT + T F Q+
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL-------------AEKESLTEEEATEFLKQIL 124
Query: 147 RGMQFLSS 154
G+ +L S
Sbjct: 125 NGVYYLHS 132
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LG G F V KC + + + K + R D+ +E++++K + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVI 77
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
L K +I+E V G+L FL + SLT + T F Q+
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL-------------AEKESLTEEEATEFLKQIL 124
Query: 147 RGMQFLSS 154
G+ +L S
Sbjct: 125 NGVYYLHS 132
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 14/138 (10%)
Query: 20 HIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTL 79
H ++ + LG G F V KC G + + L + R ++ +E+ +++ +
Sbjct: 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 80 DPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLT 139
HPN++ L K +I+E V G+L FL + SLT + T
Sbjct: 66 -RHPNIITLHDIFENKTDVVLILELVSGGELFDFL-------------AEKESLTEDEAT 111
Query: 140 SFCYQVARGMQFLSSRGV 157
F Q+ G+ +L S+ +
Sbjct: 112 QFLKQILDGVHYLHSKRI 129
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNV 85
+LG+G FG+V C+ I G+E C V V + ++ + ++ LL+E+ ++K LD HPN+
Sbjct: 33 VLGKGSFGEVILCKD-KITGQE--CAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNI 88
Query: 86 VRLLGCCTEKEPFFVIMEYVPYGKL 110
++L +K F+++ E G+L
Sbjct: 89 MKLYEFFEDKGYFYLVGEVYTGGEL 113
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 14/138 (10%)
Query: 20 HIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTL 79
H ++ + LG G F V KC G + + L + R ++ +E+ +++ +
Sbjct: 13 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 72
Query: 80 DPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLT 139
HPN++ L K +I+E V G+L FL + SLT + T
Sbjct: 73 -RHPNIITLHDIFENKTDVVLILELVSGGELFDFL-------------AEKESLTEDEAT 118
Query: 140 SFCYQVARGMQFLSSRGV 157
F Q+ G+ +L S+ +
Sbjct: 119 QFLKQILDGVHYLHSKRI 136
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNV 85
+LG+G FG+V C+ I G+E C V V + ++ + ++ LL+E+ ++K LD HPN+
Sbjct: 56 VLGKGSFGEVILCKD-KITGQE--CAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNI 111
Query: 86 VRLLGCCTEKEPFFVIMEYVPYGKL 110
++L +K F+++ E G+L
Sbjct: 112 MKLYEFFEDKGYFYLVGEVYTGGEL 136
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNV 85
+LG+G FG+V C+ I G+E C V V + ++ + ++ LL+E+ ++K LD HPN+
Sbjct: 57 VLGKGSFGEVILCKD-KITGQE--CAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNI 112
Query: 86 VRLLGCCTEKEPFFVIMEYVPYGKL 110
++L +K F+++ E G+L
Sbjct: 113 MKLYEFFEDKGYFYLVGEVYTGGEL 137
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 14/138 (10%)
Query: 20 HIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTL 79
H ++ + LG G F V KC G + + L + R ++ +E+ +++ +
Sbjct: 27 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREI 86
Query: 80 DPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLT 139
HPN++ L K +I+E V G+L FL + SLT + T
Sbjct: 87 -RHPNIITLHDIFENKTDVVLILELVSGGELFDFL-------------AEKESLTEDEAT 132
Query: 140 SFCYQVARGMQFLSSRGV 157
F Q+ G+ +L S+ +
Sbjct: 133 QFLKQILDGVHYLHSKRI 150
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNV 85
+LG+G FG+V C+ I G+E C V V + ++ + ++ LL+E+ ++K LD HPN+
Sbjct: 39 VLGKGSFGEVILCKD-KITGQE--CAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNI 94
Query: 86 VRLLGCCTEKEPFFVIMEYVPYGKL 110
++L +K F+++ E G+L
Sbjct: 95 MKLYEFFEDKGYFYLVGEVYTGGEL 119
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 23/145 (15%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGE--RERLDLLQE 72
E+ + + +I+G G FG+V++ +G + VAVK + + E + ++ +++
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFWIGDE-------VAVKAARHDPDEDISQTIENVRQ 55
Query: 73 LTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNS 132
+ + HPN++ L G C ++ ++ME+ G L L R
Sbjct: 56 EAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR-------------- 101
Query: 133 LTSRDLTSFCYQVARGMQFLSSRGV 157
+ L ++ Q+ARGM +L +
Sbjct: 102 IPPDILVNWAVQIARGMNYLHDEAI 126
Score = 30.4 bits (67), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 163 LEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
L P C +M CW+ +P+ RP+FT
Sbjct: 233 LPIPSTCPEPFAKLMEDCWNPDPHSRPSFT 262
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNV 85
+LG+G FG+V C+ I G+E C V V + ++ + ++ LL+E+ ++K LD HPN+
Sbjct: 33 VLGKGSFGEVILCKD-KITGQE--CAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNI 88
Query: 86 VRLLGCCTEKEPFFVIMEYVPYGKL 110
+L +K F+++ E G+L
Sbjct: 89 XKLYEFFEDKGYFYLVGEVYTGGEL 113
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
P ++ LG+G FG+V+K + +E + A K + + E E D + E+ ++
Sbjct: 35 PEDFWEIIGELGDGAFGKVYKAQ-----NKETSVLAAAKVI-DTKSEEELEDYMVEIDIL 88
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL 114
+ D HPN+V+LL + ++++E+ G + + +
Sbjct: 89 ASCD-HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 28/160 (17%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
D+LG G F +V E + +VA+K + + A E + + E+ V+ + HPN
Sbjct: 24 DVLGTGAFSEVILAE-----DKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI-KHPN 77
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQ 144
+V L ++IM+ V G+L F R Y T RD + +Q
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGEL--FDRIVEKGFY-----------TERDASRLIFQ 124
Query: 145 VARGMQFLSSRGVRDGYRLEKPDHCRRELYNIMYYCWDKE 184
V +++L G+ +R KP+ N++YY D++
Sbjct: 125 VLDAVKYLHDLGIV--HRDLKPE-------NLLYYSLDED 155
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 28/160 (17%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
D+LG G F +V E + +VA+K + + A E + + E+ V+ + HPN
Sbjct: 24 DVLGTGAFSEVILAE-----DKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI-KHPN 77
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQ 144
+V L ++IM+ V G+L F R Y T RD + +Q
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGEL--FDRIVEKGFY-----------TERDASRLIFQ 124
Query: 145 VARGMQFLSSRGVRDGYRLEKPDHCRRELYNIMYYCWDKE 184
V +++L G+ +R KP+ N++YY D++
Sbjct: 125 VLDAVKYLHDLGIV--HRDLKPE-------NLLYYSLDED 155
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 28/160 (17%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
D+LG G F +V E + +VA+K + + A E + + E+ V+ + HPN
Sbjct: 24 DVLGTGAFSEVILAE-----DKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI-KHPN 77
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQ 144
+V L ++IM+ V G+L F R Y T RD + +Q
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGEL--FDRIVEKGFY-----------TERDASRLIFQ 124
Query: 145 VARGMQFLSSRGVRDGYRLEKPDHCRRELYNIMYYCWDKE 184
V +++L G+ +R KP+ N++YY D++
Sbjct: 125 VLDAVKYLHDLGIV--HRDLKPE-------NLLYYSLDED 155
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 28/160 (17%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
D+LG G F +V E + +VA+K + + A E + + E+ V+ + HPN
Sbjct: 24 DVLGTGAFSEVILAE-----DKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKI-KHPN 77
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQ 144
+V L ++IM+ V G+L F R Y T RD + +Q
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGEL--FDRIVEKGFY-----------TERDASRLIFQ 124
Query: 145 VARGMQFLSSRGVRDGYRLEKPDHCRRELYNIMYYCWDKE 184
V +++L G+ +R KP+ N++YY D++
Sbjct: 125 VLDAVKYLHDLGIV--HRDLKPE-------NLLYYSLDED 155
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
P ++ LG+G FG+V+K + +E + A K + + E E D + E+ ++
Sbjct: 35 PEDFWEIIGELGDGAFGKVYKAQ-----NKETSVLAAAKVI-DTKSEEELEDYMVEIDIL 88
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL 114
+ D HPN+V+LL + ++++E+ G + + +
Sbjct: 89 ASCD-HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
P ++ LG+G FG+V+K + +E + A K + + E E D + E+ ++
Sbjct: 35 PEDFWEIIGELGDGAFGKVYKAQ-----NKETSVLAAAKVI-DTKSEEELEDYMVEIDIL 88
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL 114
+ D HPN+V+LL + ++++E+ G + + +
Sbjct: 89 ASCD-HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERER-LDLLQELTVMKTLDP--HP 83
+GEG +G+V+K L GR VA+K ++ GE L ++E+ V++ L+ HP
Sbjct: 19 IGEGAYGKVFKARDLKNGGR----FVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHP 74
Query: 84 NVVRLLGCCT 93
NVVRL CT
Sbjct: 75 NVVRLFDVCT 84
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERER-LDLLQELTVMKTLDP--HP 83
+GEG +G+V+K L GR VA+K ++ GE L ++E+ V++ L+ HP
Sbjct: 19 IGEGAYGKVFKARDLKNGGR----FVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHP 74
Query: 84 NVVRLLGCCT 93
NVVRL CT
Sbjct: 75 NVVRLFDVCT 84
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN-AGERERLDLLQELTVMKTLDPHPNV 85
+G G FG V+KC +DG CI A+K K+ AG + + L+E+ L H +V
Sbjct: 15 IGSGEFGSVFKC-VKRLDG----CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHV 69
Query: 86 VRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSS-RAQRYYNNMHGKSNSLTSRDLTSFCYQ 144
VR E + + EY G L + + R Y+ +L Q
Sbjct: 70 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEA----------ELKDLLLQ 119
Query: 145 VARGMQFLSS 154
V RG++++ S
Sbjct: 120 VGRGLRYIHS 129
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN-AGERERLDLLQELTVMKTLDPHPNV 85
+G G FG V+KC +DG CI A+K K+ AG + + L+E+ L H +V
Sbjct: 17 IGSGEFGSVFKC-VKRLDG----CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHV 71
Query: 86 VRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSS-RAQRYYNNMHGKSNSLTSRDLTSFCYQ 144
VR E + + EY G L + + R Y+ +L Q
Sbjct: 72 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEA----------ELKDLLLQ 121
Query: 145 VARGMQFLSS 154
V RG++++ S
Sbjct: 122 VGRGLRYIHS 131
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN-AGERERLDLLQELTVMKTLDPHPNV 85
+G G FG V+KC +DG CI A+K K+ AG + + L+E+ L H +V
Sbjct: 17 IGSGEFGSVFKC-VKRLDG----CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHV 71
Query: 86 VRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSS-RAQRYYNNMHGKSNSLTSRDLTSFCYQ 144
VR E + + EY G L + + R Y+ +L Q
Sbjct: 72 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEA----------ELKDLLLQ 121
Query: 145 VARGMQFLSS 154
V RG++++ S
Sbjct: 122 VGRGLRYIHS 131
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With
The Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERER-LDLLQELTVMKTLDP--HP 83
+GEG +G+V+K L GR VA+K ++ GE L ++E+ V++ L+ HP
Sbjct: 19 IGEGAYGKVFKARDLKNGGR----FVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHP 74
Query: 84 NVVRLLGCCT 93
NVVRL CT
Sbjct: 75 NVVRLFDVCT 84
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN-AGERERLDLLQELTVMKTLDPHPNV 85
+G G FG V+KC +DG CI A+K K+ AG + + L+E+ L H +V
Sbjct: 19 IGSGEFGSVFKC-VKRLDG----CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHV 73
Query: 86 VRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSS-RAQRYYNNMHGKSNSLTSRDLTSFCYQ 144
VR E + + EY G L + + R Y+ +L Q
Sbjct: 74 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEA----------ELKDLLLQ 123
Query: 145 VARGMQFLSS 154
V RG++++ S
Sbjct: 124 VGRGLRYIHS 133
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERERLDLLQELTVMKTLDPHPN 84
+LG+G FG+V KC+ R AVK + K +A ++ +L+E+ ++K LD HPN
Sbjct: 29 MLGKGSFGEVLKCK-----DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD-HPN 82
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
+++L + F+++ E G+L
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGEL 108
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERERLDLLQELTVMKTLDPHPN 84
+LG+G FG+V KC+ R AVK + K +A ++ +L+E+ ++K LD HPN
Sbjct: 29 MLGKGSFGEVLKCK-----DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD-HPN 82
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
+++L + F+++ E G+L
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGEL 108
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 24/132 (18%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLK-ENAGERERLDLLQELTVMKTLDPHPNV 85
L E G++WK G D + VK LK + R+ D +E ++ HPNV
Sbjct: 18 LNENHSGELWKGRWQGND-------IVVKVLKVRDWSTRKSRDFNEECPRLRIFS-HPNV 69
Query: 86 VRLLGCC-TEKEPF-FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRD-LTSFC 142
+ +LG C + P +I ++PYG L YN +H +N + + F
Sbjct: 70 LPVLGACQSPPAPHPTLITHWMPYGSL------------YNVLHEGTNFVVDQSQAVKFA 117
Query: 143 YQVARGMQFLSS 154
+ARGM FL +
Sbjct: 118 LDMARGMAFLHT 129
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 64/147 (43%), Gaps = 24/147 (16%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
P ++ +++G G +GQV+K G + G + A+K + E E ++ QE+ ++
Sbjct: 22 PAGIFELVELVGNGTYGQVYK----GRHVKTGQ-LAAIKVMDVTGDEEE--EIKQEINML 74
Query: 77 KTLDPHPNVVRLLGCCTEKEP------FFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
K H N+ G +K P +++ME+ G + ++++ K
Sbjct: 75 KKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT-----------KG 123
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSRGV 157
N+L + C ++ RG+ L V
Sbjct: 124 NTLKEEWIAYICREILRGLSHLHQHKV 150
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 14/128 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LG G F V KC + + + K + R D+ +E++++K + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVI 77
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
L K +I E V G+L FL + SLT + T F Q+
Sbjct: 78 TLHEVYENKTDVILIGELVAGGELFDFL-------------AEKESLTEEEATEFLKQIL 124
Query: 147 RGMQFLSS 154
G+ +L S
Sbjct: 125 NGVYYLHS 132
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 23/149 (15%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S D WE+P I V +G G FG V+K + G VAVK L A ++L
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQA 78
Query: 70 LQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHG 128
+ E+ V++ H N++ +G T K ++ ++ L Y+++H
Sbjct: 79 FKNEVGVLRKTR-HVNILLFMGYST-KPQLAIVTQWCEGSSL------------YHHLHI 124
Query: 129 KSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
L Q A+GM +L ++ +
Sbjct: 125 IETKFEMIKLIDIARQTAQGMDYLHAKSI 153
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 18/96 (18%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERL------------DLLQELT 74
LG G +G+V C+ + G A+K +K++ ++ R ++ E++
Sbjct: 44 LGSGAYGEVLLCKE-----KNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEIS 98
Query: 75 VMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 110
++K+LD HPN+++L +K+ F+++ E+ G+L
Sbjct: 99 LLKSLD-HPNIIKLFDVFEDKKYFYLVTEFYEGGEL 133
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 23/149 (15%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S D WE+P I V +G G FG V+K + G VAVK L A ++L
Sbjct: 26 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQA 77
Query: 70 LQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHG 128
+ E+ V++ H N++ +G T K ++ ++ L Y+++H
Sbjct: 78 FKNEVGVLRKTR-HVNILLFMGYST-KPQLAIVTQWCEGSSL------------YHHLHI 123
Query: 129 KSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
L Q A+GM +L ++ +
Sbjct: 124 IETKFEMIKLIDIARQTAQGMDYLHAKSI 152
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 23/149 (15%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S D WE+P I V +G G FG V+K + G VAVK L A ++L
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQA 78
Query: 70 LQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHG 128
+ E+ V++ H N++ +G T K ++ ++ L Y+++H
Sbjct: 79 FKNEVGVLRKTR-HVNILLFMGYST-KPQLAIVTQWCEGSSL------------YHHLHI 124
Query: 129 KSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
L Q A+GM +L ++ +
Sbjct: 125 IETKFEMIKLIDIARQTAQGMDYLHAKSI 153
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 23/149 (15%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S D WE+P I V +G G FG V+K + G VAVK L A ++L
Sbjct: 19 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQA 70
Query: 70 LQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHG 128
+ E+ V++ H N++ +G T K ++ ++ L Y+++H
Sbjct: 71 FKNEVGVLRKTR-HVNILLFMGYST-KPQLAIVTQWCEGSSL------------YHHLHI 116
Query: 129 KSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
L Q A+GM +L ++ +
Sbjct: 117 IETKFEMIKLIDIARQTAQGMDYLHAKSI 145
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 23/149 (15%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S D WE+P I V +G G FG V+K + G VAVK L A ++L
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQA 55
Query: 70 LQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHG 128
+ E+ V++ H N++ +G T K ++ ++ L Y+++H
Sbjct: 56 FKNEVGVLRKTR-HVNILLFMGYST-KPQLAIVTQWCEGSSL------------YHHLHI 101
Query: 129 KSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
L Q A+GM +L ++ +
Sbjct: 102 IETKFEMIKLIDIARQTAQGMDYLHAKSI 130
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 23/149 (15%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S D WE+P I V +G G FG V+K + G VAVK L A ++L
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQA 55
Query: 70 LQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHG 128
+ E+ V++ H N++ +G T K ++ ++ L Y+++H
Sbjct: 56 FKNEVGVLRKTR-HVNILLFMGYST-KPQLAIVTQWCEGSSL------------YHHLHI 101
Query: 129 KSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
L Q A+GM +L ++ +
Sbjct: 102 IETKFEMIKLIDIARQTAQGMDYLHAKSI 130
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 23/149 (15%)
Query: 10 SDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL 69
S D WE+P I V +G G FG V+K + G VAVK L A ++L
Sbjct: 1 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQA 52
Query: 70 LQ-ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHG 128
+ E+ V++ H N++ +G T K ++ ++ L Y+++H
Sbjct: 53 FKNEVGVLRKTR-HVNILLFMGYST-KPQLAIVTQWCEGSSL------------YHHLHI 98
Query: 129 KSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
L Q A+GM +L ++ +
Sbjct: 99 IETKFEMIKLIDIARQTAQGMDYLHAKSI 127
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL-LQELTVMKTLDPHPN 84
++GEG +G V KC ++ IVA+K E+ ++ + ++E+ ++K L H N
Sbjct: 32 LVGEGSYGMVMKCR-----NKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR-HEN 85
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQ 144
+V LL C +K+ ++++ E+V + L +++ N L + + + +Q
Sbjct: 86 LVNLLEVCKKKKRWYLVFEFVDHTIL-------------DDLELFPNGLDYQVVQKYLFQ 132
Query: 145 VARGMQFLSSRGV 157
+ G+ F S +
Sbjct: 133 IINGIGFCHSHNI 145
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ IVA+K L ++ E+E ++ L +E+ + L HPN
Sbjct: 31 LGKGKFGNVYLARE-----KKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH-HPN 84
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSS 117
++RL ++ ++I+EY P G+L L+ S
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGELYKELQKS 117
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 20/138 (14%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
P + D +G+G FG+V+K GID +VA+K + E E D+ QE+TV+
Sbjct: 17 PEELFTKLDRIGKGSFGEVYK----GIDNHTKE-VVAIKIIDLEEAEDEIEDIQQEITVL 71
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR 136
D P + R G + ++IMEY+ G L+ + Y
Sbjct: 72 SQCD-SPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETY------------- 117
Query: 137 DLTSFCYQVARGMQFLSS 154
+ + ++ +G+ +L S
Sbjct: 118 -IATILREILKGLDYLHS 134
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 17/132 (12%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNV 85
++G G FG+V+K G+ + +T + + G E ++ L+ + HP++
Sbjct: 46 LIGHGVFGKVYK----GVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR----HPHL 97
Query: 86 VRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQV 145
V L+G C E+ +I +Y+ G L+ L Y +++ S S R C
Sbjct: 98 VSLIGFCDERNEMILIYKYMENGNLKRHL-------YGSDLPTMSMSWEQR--LEICIGA 148
Query: 146 ARGMQFLSSRGV 157
ARG+ +L +R +
Sbjct: 149 ARGLHYLHTRAI 160
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 74/150 (49%), Gaps = 26/150 (17%)
Query: 15 EVPRQHIKV--FDI---LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD- 68
E+P++ + FDI LG+G FG V+ ++ I+A+K L ++ E+E ++
Sbjct: 6 EMPKRKFTIDDFDIGRPLGKGKFGNVYLARE-----KQNKFIMALKVLFKSQLEKEGVEH 60
Query: 69 -LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 127
L +E+ + L HPN++R+ +++ ++++E+ P G+L L+ H
Sbjct: 61 QLRREIEIQSHLR-HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK----------H 109
Query: 128 GKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
G+ + S +F ++A + + R V
Sbjct: 110 GRFDEQRS---ATFMEELADALHYCHERKV 136
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 17/132 (12%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNV 85
++G G FG+V+K G+ + +T + + G E ++ L+ + HP++
Sbjct: 46 LIGHGVFGKVYK----GVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR----HPHL 97
Query: 86 VRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQV 145
V L+G C E+ +I +Y+ G L+ L Y +++ S S R C
Sbjct: 98 VSLIGFCDERNEMILIYKYMENGNLKRHL-------YGSDLPTMSMSWEQR--LEICIGA 148
Query: 146 ARGMQFLSSRGV 157
ARG+ +L +R +
Sbjct: 149 ARGLHYLHTRAI 160
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 74/150 (49%), Gaps = 26/150 (17%)
Query: 15 EVPRQHIKV--FDI---LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD- 68
E+P++ + FDI LG+G FG V+ ++ I+A+K L ++ E+E ++
Sbjct: 5 EMPKRKFTIDDFDIGRPLGKGKFGNVYLARE-----KQNKFIMALKVLFKSQLEKEGVEH 59
Query: 69 -LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 127
L +E+ + L HPN++R+ +++ ++++E+ P G+L L+ H
Sbjct: 60 QLRREIEIQSHLR-HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK----------H 108
Query: 128 GKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
G+ + S +F ++A + + R V
Sbjct: 109 GRFDEQRS---ATFMEELADALHYCHERKV 135
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 74/150 (49%), Gaps = 26/150 (17%)
Query: 15 EVPRQHIKV--FDI---LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD- 68
E+P++ + FDI LG+G FG V+ ++ I+A+K L ++ E+E ++
Sbjct: 5 EMPKRKFTIDDFDIVRPLGKGKFGNVYLARE-----KQNKFIMALKVLFKSQLEKEGVEH 59
Query: 69 -LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMH 127
L +E+ + L HPN++R+ +++ ++++E+ P G+L L+ H
Sbjct: 60 QLRREIEIQSHLR-HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK----------H 108
Query: 128 GKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
G+ + S +F ++A + + R V
Sbjct: 109 GRFDEQRS---ATFMEELADALHYCHERKV 135
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 29/147 (19%)
Query: 15 EVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELT 74
E+ ++V +L EG F V++ + +G GRE A+K L N E+ R ++QE+
Sbjct: 24 ELGELRLRVRRVLAEGGFAFVYEAQDVG-SGRE----YALKRLLSNEEEKNR-AIIQEVC 77
Query: 75 VMKTLDPHPNVVRLLGCCT-------EKEPFFVIMEYVPYGKLQSFLRSSRAQ------- 120
MK L HPN+V+ + + F+++ + G+L FL+ ++
Sbjct: 78 FMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDT 137
Query: 121 ---------RYYNNMHGKSNSLTSRDL 138
R +MH + + RDL
Sbjct: 138 VLKIFYQTCRAVQHMHRQKPPIIHRDL 164
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD-LLQELTVMKTLD 80
++ +G+G F +V + + G+E VAVK + + L L +E+ +MK L+
Sbjct: 17 RLLKTIGKGNFAKVKLARHI-LTGKE----VAVKIIDKTQLNSSSLQKLFREVRIMKVLN 71
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL 114
HPN+V+L ++ +++MEY G++ +L
Sbjct: 72 -HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD-LLQELTVMKTLD 80
++ +G+G F +V + + G+E VAVK + + L L +E+ +MK L+
Sbjct: 17 RLLKTIGKGNFAKVKLARHI-LTGKE----VAVKIIDKTQLNSSSLQKLFREVRIMKVLN 71
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL 114
HPN+V+L ++ +++MEY G++ +L
Sbjct: 72 -HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
Query: 24 FDI---LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKT 78
FDI LG+G FG V+ R+ I+A+K L + E+ ++ L +E+ +
Sbjct: 14 FDIGRPLGKGKFGNVYLARE-----RQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSH 68
Query: 79 LDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 110
L HPN++RL G + ++I+EY P G +
Sbjct: 69 LR-HPNILRLYGYFHDATRVYLILEYAPLGTV 99
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD-LLQELTVMKTLD 80
++ +G+G F +V + + G+E VAVK + + L L +E+ +MK L+
Sbjct: 17 RLLKTIGKGNFAKVKLARHI-LTGKE----VAVKIIDKTQLNSSSLQKLFREVRIMKVLN 71
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL 114
HPN+V+L ++ +++MEY G++ +L
Sbjct: 72 -HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 23/147 (15%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D WE+P I V +G G FG V+K + G VAVK L A ++L +
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQAFK 52
Query: 72 -ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E+ V++ H N++ +G T K ++ ++ L Y+++H
Sbjct: 53 NEVGVLRKTR-HVNILLFMGYST-KPQLAIVTQWCEGSSL------------YHHLHIIE 98
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSRGV 157
L Q A+GM +L ++ +
Sbjct: 99 TKFEMIKLIDIARQTAQGMDYLHAKSI 125
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
Query: 24 FDI---LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKT 78
FDI LG+G FG V+ R+ I+A+K L + E+ ++ L +E+ +
Sbjct: 14 FDIGRPLGKGKFGNVYLARE-----RQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSH 68
Query: 79 LDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 110
L HPN++RL G + ++I+EY P G +
Sbjct: 69 LR-HPNILRLYGYFHDATRVYLILEYAPLGTV 99
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 23/147 (15%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D WE+P I V +G G FG V+K + G VAVK L A ++L +
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQAFK 52
Query: 72 -ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E+ V++ H N++ +G T K ++ ++ L Y+++H
Sbjct: 53 NEVGVLRKTR-HVNILLFMGYST-KPQLAIVTQWCEGSSL------------YHHLHIIE 98
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSRGV 157
L Q A+GM +L ++ +
Sbjct: 99 TKFEMIKLIDIARQTAQGMDYLHAKSI 125
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD-LLQELTVMKTLD 80
++ +G+G F +V + + GRE VA+K + + L L +E+ +MK L+
Sbjct: 15 RLLKTIGKGNFAKVKLARHI-LTGRE----VAIKIIDKTQLNPTSLQKLFREVRIMKILN 69
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL 114
HPN+V+L ++ ++IMEY G++ +L
Sbjct: 70 -HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL 102
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
+ILG G FG+V+K DG +VAVK LKE + L E+ M ++ H N
Sbjct: 44 NILGRGGFGKVYKGRL--ADG----TLVAVKRLKEERXQGGELQFQTEVE-MISMAVHRN 96
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
++RL G C ++ Y+ G + S LR
Sbjct: 97 LLRLRGFCMTPTERLLVYPYMANGSVASCLR 127
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD-LLQELTVMKTLD 80
++ +G+G F +V K + G+E VAVK + + L L +E+ +MK L+
Sbjct: 10 RLLKTIGKGNFAKV-KLARHILTGKE----VAVKIIDKTQLNSSSLQKLFREVRIMKVLN 64
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL 114
HPN+V+L ++ +++MEY G++ +L
Sbjct: 65 -HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 97
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD-LLQELTVMKTLD 80
++ +G+G F +V + + GRE VA+K + + L L +E+ +MK L+
Sbjct: 18 RLLKTIGKGNFAKVKLARHI-LTGRE----VAIKIIDKTQLNPTSLQKLFREVRIMKILN 72
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL 114
HPN+V+L ++ ++IMEY G++ +L
Sbjct: 73 -HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL 105
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNV 85
+LG+G +G V+ L R +A+K + E R L +E+ + K L H N+
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVR-----IAIKEIPER-DSRYSQPLHEEIALHKHLK-HKNI 81
Query: 86 VRLLGCCTEKEPFFVIMEYVPYGKLQSFLRS 116
V+ LG +E + ME VP G L + LRS
Sbjct: 82 VQYLGSFSENGFIKIFMEQVPGGSLSALLRS 112
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNV 85
+LG+G +G V+ L R +A+K + E R L +E+ + K L H N+
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVR-----IAIKEIPER-DSRYSQPLHEEIALHKHLK-HKNI 67
Query: 86 VRLLGCCTEKEPFFVIMEYVPYGKLQSFLRS 116
V+ LG +E + ME VP G L + LRS
Sbjct: 68 VQYLGSFSENGFIKIFMEQVPGGSLSALLRS 98
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 24/132 (18%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLK-ENAGERERLDLLQELTVMKTLDPHPNV 85
L E G++WK G D + VK LK + R+ D +E ++ HPNV
Sbjct: 18 LNENHSGELWKGRWQGND-------IVVKVLKVRDWSTRKSRDFNEECPRLRIFS-HPNV 69
Query: 86 VRLLGCC-TEKEPF-FVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRD-LTSFC 142
+ +LG C + P +I + PYG L YN +H +N + + F
Sbjct: 70 LPVLGACQSPPAPHPTLITHWXPYGSL------------YNVLHEGTNFVVDQSQAVKFA 117
Query: 143 YQVARGMQFLSS 154
ARG FL +
Sbjct: 118 LDXARGXAFLHT 129
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD-LLQELTVMKTLDPHPNV 85
+G+G F +V K + GRE VAVK + + L L +E+ +MK L+ HPN+
Sbjct: 23 IGKGNFAKV-KLARHVLTGRE----VAVKIIDKTQLNPTSLQKLFREVRIMKILN-HPNI 76
Query: 86 VRLLGCCTEKEPFFVIMEYVPYGKLQSFL 114
V+L ++ +++MEY G++ +L
Sbjct: 77 VKLFEVIETEKTLYLVMEYASGGEVFDYL 105
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 23/147 (15%)
Query: 12 DKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQ 71
D WE+P I V +G G FG V+K + G VAVK L A ++L +
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQAFK 52
Query: 72 -ELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
E+ V++ H N++ +G T + ++ ++ L Y+++H
Sbjct: 53 NEVGVLRKTR-HVNILLFMGYSTAPQ-LAIVTQWCEGSSL------------YHHLHIIE 98
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSRGV 157
L Q A+GM +L ++ +
Sbjct: 99 TKFEMIKLIDIARQTAQGMDYLHAKSI 125
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 24 FDILGE-GCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPH 82
++I+GE G FG+V+K + +E + A K + + E E D + E+ ++ + D H
Sbjct: 14 WEIIGELGDFGKVYKAQ-----NKETSVLAAAKVI-DTKSEEELEDYMVEIDILASCD-H 66
Query: 83 PNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL 114
PN+V+LL + ++++E+ G + + +
Sbjct: 67 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 98
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
+ILG G FG+V+K DG +VAVK LKE + L E+ M ++ H N
Sbjct: 36 NILGRGGFGKVYKGRL--ADG----XLVAVKRLKEERTQGGELQFQTEVE-MISMAVHRN 88
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
++RL G C ++ Y+ G + S LR
Sbjct: 89 LLRLRGFCMTPTERLLVYPYMANGSVASCLR 119
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 10/119 (8%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL-LQELTVMKTLDPHPNV 85
+GEG +G V+KC R+ IVA+K E+ + + L+E+ ++K L HPN+
Sbjct: 11 IGEGSYGVVFKCR-----NRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK-HPNL 64
Query: 86 VRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQ 144
V LL K ++ EY + L R QR KS + + +FC++
Sbjct: 65 VNLLEVFRRKRRLHLVFEYCDHTVLHEL---DRYQRGVPEHLVKSITWQTLQAVNFCHK 120
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD-LLQELTVMKTLD 80
++ +G+G F +V + + G+E VAV+ + + L L +E+ +MK L+
Sbjct: 17 RLLKTIGKGNFAKVKLARHI-LTGKE----VAVRIIDKTQLNSSSLQKLFREVRIMKVLN 71
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL 114
HPN+V+L ++ +++MEY G++ +L
Sbjct: 72 -HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD-LLQELTVMKTLD 80
++ +G+G F +V + + G+E VAV+ + + L L +E+ +MK L+
Sbjct: 17 RLLKTIGKGNFAKVKLARHI-LTGKE----VAVRIIDKTQLNSSSLQKLFREVRIMKVLN 71
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL 114
HPN+V+L ++ +++MEY G++ +L
Sbjct: 72 -HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 31/162 (19%)
Query: 7 NQKSDDKWEVPRQHIKV--------FDI-LGEGCFGQVWKCEALGIDGREGPCIVAVKTL 57
NQ+ DD E+ + + FDI +G G F V+K G+D + +
Sbjct: 5 NQQQDDIEELETKAVGXSNDGRFLKFDIEIGRGSFKTVYK----GLDTETTVEVAWCELQ 60
Query: 58 KENAGERERLDLLQELTVMKTLDPHPNVVRLL----GCCTEKEPFFVIMEYVPYGKLQSF 113
+ ER +E +K L HPN+VR K+ ++ E G L+++
Sbjct: 61 DRKLTKSERQRFKEEAEXLKGLQ-HPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTY 119
Query: 114 LRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSR 155
L+ + + + L S+C Q+ +G+QFL +R
Sbjct: 120 LKRFKVXKI-------------KVLRSWCRQILKGLQFLHTR 148
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 63/131 (48%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 10 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 64
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E+V + L++F+ +S + G L + S+ +Q+
Sbjct: 65 KLLDVIHTENKLYLVFEHV-HQDLKTFMDAS-------ALTGIPLPL----IKSYLFQLL 112
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 113 QGLAFCHSHRV 123
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 21/141 (14%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
PR ++ F +GEG G V C A R +VAVK + +R L L E+ +M
Sbjct: 22 PRSYLDNFIKIGEGSTGIV--CIA---TVRSSGKLVAVKKMDLRKQQRREL-LFNEVVIM 75
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR 136
+ H NVV + + +V+ME++ G L + +R +
Sbjct: 76 RDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--------------MNEE 120
Query: 137 DLTSFCYQVARGMQFLSSRGV 157
+ + C V + + L ++GV
Sbjct: 121 QIAAVCLAVLQALSVLHAQGV 141
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 21/141 (14%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
PR ++ F +GEG G V C A R +VAVK + +R L L E+ +M
Sbjct: 18 PRSYLDNFIKIGEGSTGIV--CIA---TVRSSGKLVAVKKMDLRKQQRREL-LFNEVVIM 71
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR 136
+ H NVV + + +V+ME++ G L + +R +
Sbjct: 72 RDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--------------MNEE 116
Query: 137 DLTSFCYQVARGMQFLSSRGV 157
+ + C V + + L ++GV
Sbjct: 117 QIAAVCLAVLQALSVLHAQGV 137
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 21/141 (14%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
PR+++ F +GEG G V + + G VAVK + +R L L E+ +M
Sbjct: 43 PREYLANFIKIGEGSTGIV----CIATEKHTGKQ-VAVKKMDLRKQQRREL-LFNEVVIM 96
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR 136
+ H NVV + + +V+ME++ G L + +R +
Sbjct: 97 RDYH-HDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTR--------------MNEE 141
Query: 137 DLTSFCYQVARGMQFLSSRGV 157
+ + C V R + +L ++GV
Sbjct: 142 QIATVCLSVLRALSYLHNQGV 162
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVK---TLKENAGERERLDLLQELTVMKTLDPHP 83
LG G +G+V C+ + G E + K T N+G LL E+ V+K LD HP
Sbjct: 12 LGSGAYGEVLLCKD-KLTGAERAIKIIKKSSVTTTSNSGA-----LLDEVAVLKQLD-HP 64
Query: 84 NVVRLLGCCTEKEPFFVIMEYVPYGKL 110
N+++L +K ++++ME G+L
Sbjct: 65 NIMKLYEFFEDKRNYYLVMEVYRGGEL 91
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 21/141 (14%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
PR ++ F +GEG G V C A R +VAVK + +R L L E+ +M
Sbjct: 27 PRSYLDNFIKIGEGSTGIV--CIA---TVRSSGKLVAVKKMDLRKQQRREL-LFNEVVIM 80
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR 136
+ H NVV + + +V+ME++ G L + +R +
Sbjct: 81 RDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--------------MNEE 125
Query: 137 DLTSFCYQVARGMQFLSSRGV 157
+ + C V + + L ++GV
Sbjct: 126 QIAAVCLAVLQALSVLHAQGV 146
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 21/141 (14%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
PR ++ F +GEG G V C A R +VAVK + +R L L E+ +M
Sbjct: 29 PRSYLDNFIKIGEGSTGIV--CIA---TVRSSGKLVAVKKMDLRKQQRREL-LFNEVVIM 82
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR 136
+ H NVV + + +V+ME++ G L + +R +
Sbjct: 83 RDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--------------MNEE 127
Query: 137 DLTSFCYQVARGMQFLSSRGV 157
+ + C V + + L ++GV
Sbjct: 128 QIAAVCLAVLQALSVLHAQGV 148
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 72/151 (47%), Gaps = 19/151 (12%)
Query: 20 HIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGE-RERLDLLQELTVMKT 78
H ++ +LG+G FG+V+ + + + A+K LK+ + R+R+ E ++
Sbjct: 29 HFELLKVLGQGSFGKVFLVRK--VTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILAD 86
Query: 79 LDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDL 138
++ HP VV+L + ++I++++ G L F R S+ + T D+
Sbjct: 87 VN-HPFVVKLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMF-----------TEEDV 132
Query: 139 TSFCYQVARGMQFLSSRGVRDGYRLEKPDHC 169
+ ++A G+ L S G+ YR KP++
Sbjct: 133 KFYLAELALGLDHLHSLGII--YRDLKPENI 161
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 17 PRQ-HIKVFDI---LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LL 70
PRQ ++ F+I LG+G FG V+ ++ I+A+K L + E+ ++ L
Sbjct: 2 PRQWALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 110
+E+ + L HPN++RL G + ++I+EY P G +
Sbjct: 57 REVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTV 95
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVK---TLKENAGERERLDLLQELTVMKTLDPHP 83
LG G +G+V C+ + G E + K T N+G LL E+ V+K LD HP
Sbjct: 29 LGSGAYGEVLLCKD-KLTGAERAIKIIKKSSVTTTSNSGA-----LLDEVAVLKQLD-HP 81
Query: 84 NVVRLLGCCTEKEPFFVIMEYVPYGKL 110
N+++L +K ++++ME G+L
Sbjct: 82 NIMKLYEFFEDKRNYYLVMEVYRGGEL 108
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 21/141 (14%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
PR ++ F +GEG G V C A R +VAVK + +R L L E+ +M
Sbjct: 72 PRSYLDNFIKIGEGSTGIV--CIA---TVRSSGKLVAVKKMDLRKQQRREL-LFNEVVIM 125
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR 136
+ H NVV + + +V+ME++ G L + +R +
Sbjct: 126 RDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--------------MNEE 170
Query: 137 DLTSFCYQVARGMQFLSSRGV 157
+ + C V + + L ++GV
Sbjct: 171 QIAAVCLAVLQALSVLHAQGV 191
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 17 PRQ-HIKVFDI---LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LL 70
PRQ ++ F+I LG+G FG V+ ++ I+A+K L + E+ ++ L
Sbjct: 2 PRQWALEDFEIGRPLGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 110
+E+ + L HPN++RL G + ++I+EY P G +
Sbjct: 57 REVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTV 95
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 11 IGEGTYGVVYKAR----NKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELN-HPNIV 65
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 113
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 114 QGLAFCHSHRV 124
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 10 IGEGTYGVVYKAR----NKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELN-HPNIV 64
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 65 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 112
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 113 QGLAFCHSHRV 123
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 20/138 (14%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
P + + +G+G FG+V+K GID R +VA+K + E E D+ QE+TV+
Sbjct: 20 PEELFTKLEKIGKGSFGEVFK----GIDNRTQK-VVAIKIIDLEEAEDEIEDIQQEITVL 74
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR 136
D P V + G + ++IMEY+ G L + L
Sbjct: 75 SQCD-SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--------------EPGPLDET 119
Query: 137 DLTSFCYQVARGMQFLSS 154
+ + ++ +G+ +L S
Sbjct: 120 QIATILREILKGLDYLHS 137
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 63/131 (48%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 14 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 68
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L++F+ +S + G L + S+ +Q+
Sbjct: 69 KLLDVIHTENKLYLVFEFL-HQDLKTFMDAS-------ALTGIPLPL----IKSYLFQLL 116
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 117 QGLAFCHSHRV 127
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LG G +G+V C I+ ++ ++ + LL+E+ V+K LD HPN++
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSK----LLEEVAVLKLLD-HPNIM 99
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKL 110
+L +K ++++ME G+L
Sbjct: 100 KLYDFFEDKRNYYLVMECYKGGEL 123
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 20/138 (14%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
P + + +G+G FG+V+K GID R +VA+K + E E D+ QE+TV+
Sbjct: 5 PEELFTKLEKIGKGSFGEVFK----GIDNRTQK-VVAIKIIDLEEAEDEIEDIQQEITVL 59
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR 136
D P V + G + ++IMEY+ G L + L
Sbjct: 60 SQCD-SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--------------EPGPLDET 104
Query: 137 DLTSFCYQVARGMQFLSS 154
+ + ++ +G+ +L S
Sbjct: 105 QIATILREILKGLDYLHS 122
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 20/138 (14%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
P + + +G+G FG+V+K GID R +VA+K + E E D+ QE+TV+
Sbjct: 5 PEELFTKLEKIGKGSFGEVFK----GIDNRTQK-VVAIKIIDLEEAEDEIEDIQQEITVL 59
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR 136
D P V + G + ++IMEY+ G L + L
Sbjct: 60 SQCD-SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--------------EPGPLDET 104
Query: 137 DLTSFCYQVARGMQFLSS 154
+ + ++ +G+ +L S
Sbjct: 105 QIATILREILKGLDYLHS 122
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/145 (18%), Positives = 58/145 (40%), Gaps = 20/145 (13%)
Query: 13 KWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQE 72
+W++P + +++ +++G+G FGQV+ G VA++ + ++L +
Sbjct: 27 EWDIPFEQLEIGELIGKGRFGQVYHGRWHG--------EVAIRLIDIERDNEDQLKAFKR 78
Query: 73 LTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNS 132
+ H NVV +G C +I L S +R ++ N
Sbjct: 79 EVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTR----- 133
Query: 133 LTSRDLTSFCYQVARGMQFLSSRGV 157
++ +GM +L ++G+
Sbjct: 134 -------QIAQEIVKGMGYLHAKGI 151
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 27/113 (23%)
Query: 83 PNVVRLLGCCTE--KEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTS 140
P ++R L TE K PF + G + + +H + ++ +
Sbjct: 203 PEIIRQLSPDTEEDKLPFSKHSDVFALGTI------------WYELHAREWPFKTQPAEA 250
Query: 141 FCYQVARGMQ-FLSSRGVRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+Q+ GM+ LS G+ +E+ +I+ +CW E ERP FT
Sbjct: 251 IIWQMGTGMKPNLSQIGMG------------KEISDILLFCWAFEQEERPTFT 291
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 17 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 70
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTV 96
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 21 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 74
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G++
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEV 100
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 21/155 (13%)
Query: 3 DPVLNQKSDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAG 62
+P QK +D +++ + LG G F V KC + + + +
Sbjct: 3 EPFKQQKVEDFYDIGEE-------LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRR 55
Query: 63 ERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRY 122
R ++ +E+++++ + H NV+ L + +I+E V G+L FL
Sbjct: 56 GVSREEIEREVSILRQV-LHHNVITLHDVYENRTDVVLILELVSGGELFDFL-------- 106
Query: 123 YNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
+ SL+ + TSF Q+ G+ +L ++ +
Sbjct: 107 -----AQKESLSEEEATSFIKQILDGVNYLHTKKI 136
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 21/155 (13%)
Query: 3 DPVLNQKSDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAG 62
+P QK +D +++ + LG G F V KC + + + +
Sbjct: 3 EPFKQQKVEDFYDIGEE-------LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRR 55
Query: 63 ERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRY 122
R ++ +E+++++ + H NV+ L + +I+E V G+L FL
Sbjct: 56 GVSREEIEREVSILRQV-LHHNVITLHDVYENRTDVVLILELVSGGELFDFL-------- 106
Query: 123 YNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
+ SL+ + TSF Q+ G+ +L ++ +
Sbjct: 107 -----AQKESLSEEEATSFIKQILDGVNYLHTKKI 136
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 11 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 65
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 113
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 114 QGLAFCHSHRV 124
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 15 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 69
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 70 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 117
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 118 QGLAFCHSHRV 128
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 21/141 (14%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
PR ++ F +GEG G V C A R +VAVK + +R L L E+ +M
Sbjct: 149 PRSYLDNFIKIGEGSTGIV--CIA---TVRSSGKLVAVKKMDLRKQQRREL-LFNEVVIM 202
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR 136
+ H NVV + + +V+ME++ G L + +R +
Sbjct: 203 RDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--------------MNEE 247
Query: 137 DLTSFCYQVARGMQFLSSRGV 157
+ + C V + + L ++GV
Sbjct: 248 QIAAVCLAVLQALSVLHAQGV 268
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 17 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 70
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTV 96
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 17 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 70
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTV 96
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 21/155 (13%)
Query: 3 DPVLNQKSDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAG 62
+P QK +D +++ + LG G F V KC + + + +
Sbjct: 3 EPFKQQKVEDFYDIGEE-------LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRR 55
Query: 63 ERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRY 122
R ++ +E+++++ + H NV+ L + +I+E V G+L FL
Sbjct: 56 GVSREEIEREVSILRQV-LHHNVITLHDVYENRTDVVLILELVSGGELFDFL-------- 106
Query: 123 YNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
+ SL+ + TSF Q+ G+ +L ++ +
Sbjct: 107 -----AQKESLSEEEATSFIKQILDGVNYLHTKKI 136
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 21/155 (13%)
Query: 3 DPVLNQKSDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAG 62
+P QK +D +++ + LG G F V KC + + + +
Sbjct: 3 EPFKQQKVEDFYDIGEE-------LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRR 55
Query: 63 ERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRY 122
R ++ +E+++++ + H NV+ L + +I+E V G+L FL
Sbjct: 56 GVSREEIEREVSILRQV-LHHNVITLHDVYENRTDVVLILELVSGGELFDFL-------- 106
Query: 123 YNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
+ SL+ + TSF Q+ G+ +L ++ +
Sbjct: 107 -----AQKESLSEEEATSFIKQILDGVNYLHTKKI 136
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 21 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 74
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTV 100
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 16 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 69
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTV 95
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 20/138 (14%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
P + + +G+G FG+V+K GID R +VA+K + E E D+ QE+TV+
Sbjct: 25 PEELFTKLEKIGKGSFGEVFK----GIDNRTQK-VVAIKIIDLEEAEDEIEDIQQEITVL 79
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR 136
D P V + G + ++IMEY+ G L + L
Sbjct: 80 SQCD-SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--------------EPGPLDET 124
Query: 137 DLTSFCYQVARGMQFLSS 154
+ + ++ +G+ +L S
Sbjct: 125 QIATILREILKGLDYLHS 142
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 19 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 72
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTV 98
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 19 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 72
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTV 98
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 15 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 68
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTV 94
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 11 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 65
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKDFMDAS-------ALTGIPLPL----IKSYLFQLL 113
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 114 QGLAFCHSHRV 124
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 61/133 (45%), Gaps = 17/133 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLK--ENAGERERLDLLQELTVMKTLDPHPN 84
+G G F +V++ L +DG VA+K ++ + + R D ++E+ ++K L+ HPN
Sbjct: 40 IGRGQFSEVYRAACL-LDG----VPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPN 93
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQ 144
V++ E +++E G L ++ + Q+ + R + + Q
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQK---------RLIPERTVWKYFVQ 144
Query: 145 VARGMQFLSSRGV 157
+ ++ + SR V
Sbjct: 145 LCSALEHMHSRRV 157
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 16 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 69
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTV 95
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 16 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 69
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTV 95
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 18 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 71
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTV 97
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 19 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 72
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTV 98
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 18 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 71
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTV 97
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 19 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 72
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTV 98
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LG G FG V E R +KT+ ++ + + E+ V+K+LD HPN++
Sbjct: 30 LGSGAFGDVHLVEE-----RSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLD-HPNII 83
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQ 120
++ + +++ME G+L + S++A+
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQAR 117
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 10 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 64
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 65 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 112
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 113 QGLAFCHSHRV 123
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 16 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 69
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTV 95
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 22/135 (16%)
Query: 27 LGEGCFGQVWKC--EALGIDGREGPCIVAVKTLKENAGERE--RLDLLQELTVMKTLDPH 82
LG G F V KC ++ G++ +K + A R R ++ +E+++++ + H
Sbjct: 20 LGSGQFAIVKKCREKSTGLEY----AAKFIKKRQSRASRRGVCREEIEREVSILRQV-LH 74
Query: 83 PNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 142
PN++ L + +I+E V G+L FL + SL+ + TSF
Sbjct: 75 PNIITLHDVYENRTDVVLILELVSGGELFDFL-------------AQKESLSEEEATSFI 121
Query: 143 YQVARGMQFLSSRGV 157
Q+ G+ +L ++ +
Sbjct: 122 KQILDGVNYLHTKKI 136
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 21 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 74
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTV 100
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 20 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 73
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTV 99
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 18 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 72
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 73 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 120
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 121 QGLAFCHSHRV 131
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 33 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 86
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 87 ILRLYGYFHDATRVYLILEYAPLGTV 112
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 13 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 67
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 68 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 115
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 116 QGLAFCHSHRV 126
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 11 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 65
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 113
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 114 QGLSFCHSHRV 124
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 19 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 72
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTV 98
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 19 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 72
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTV 98
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 10 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 64
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 65 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 112
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 113 QGLAFCHSHRV 123
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 21 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 74
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTV 100
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 10 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 64
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 65 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 112
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 113 QGLAFCHSHRV 123
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 21 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 74
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G++
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEV 100
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 12 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 66
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 67 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 114
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 115 QGLAFCHSHRV 125
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 11 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 65
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 113
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 114 QGLAFCHSHRV 124
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 16 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 69
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTV 95
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 12 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 66
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 67 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 114
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 115 QGLAFCHSHRV 125
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 14 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 68
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 69 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 116
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 117 QGLAFCHSHRV 127
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 13 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 67
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 68 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 115
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 116 QGLAFCHSHRV 126
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 11 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 65
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 113
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 114 QGLAFCHSHRV 124
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 11 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 65
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 113
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 114 QGLAFCHSHRV 124
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 11 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 65
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 113
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 114 QGLAFCHSHRV 124
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 12 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 66
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 67 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 114
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 115 QGLAFCHSHRV 125
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 21/155 (13%)
Query: 3 DPVLNQKSDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAG 62
+P QK +D +++ + LG G F V KC + + + +
Sbjct: 3 EPFKQQKVEDFYDIGEE-------LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRR 55
Query: 63 ERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRY 122
R ++ +E+++++ + H NV+ L + +I+E V G+L FL
Sbjct: 56 GVSREEIEREVSILRQV-LHHNVITLHDVYENRTDVVLILELVSGGELFDFL-------- 106
Query: 123 YNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
+ SL+ + TSF Q+ G+ +L ++ +
Sbjct: 107 -----AQKESLSEEEATSFIKQILDGVNYLHTKKI 136
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 10 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 64
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 65 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 112
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 113 QGLAFCHSHRV 123
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 13 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 67
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 68 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 115
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 116 QGLAFCHSHRV 126
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 12 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 66
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 67 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 114
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 115 QGLAFCHSHRV 125
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 11 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 65
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 113
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 114 QGLAFCHSHRV 124
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 18 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 72
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 73 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 120
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 121 QGLAFCHSHRV 131
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 15 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 69
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 70 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 117
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 118 QGLAFCHSHRV 128
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 14 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 68
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 69 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 116
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 117 QGLAFCHSHRV 127
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 11 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 65
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ + L+ F+ +S + G L + S+ +Q+
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 113
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 114 QGLAFCHSHRV 124
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 42 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 95
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTV 121
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
P + + +G+G FG+V+K GID R +VA+K + E E D+ QE+TV+
Sbjct: 21 PEELFTKLERIGKGSFGEVFK----GIDNRT-QQVVAIKIIDLEEAEDEIEDIQQEITVL 75
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRS 116
D V + G + ++IMEY+ G LR+
Sbjct: 76 SQCD-SSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA 114
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 42 LGKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 95
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTV 121
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 63/153 (41%), Gaps = 26/153 (16%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENA--GERERLDLLQELTVMKTLDPHP 83
+LG+G FG+V+ E ++ A+K LK++ + + + E V+ HP
Sbjct: 24 MLGKGSFGKVFLAEF-----KKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 84 NVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCY 143
+ + KE F +MEY+ G L ++S + T +
Sbjct: 79 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS-------------CHKFDLSRATFYAA 125
Query: 144 QVARGMQFLSSRGV------RDGYRLEKPDHCR 170
++ G+QFL S+G+ D L+K H +
Sbjct: 126 EIILGLQFLHSKGIVYRDLKLDNILLDKDGHIK 158
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 63/153 (41%), Gaps = 26/153 (16%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENA--GERERLDLLQELTVMKTLDPHP 83
+LG+G FG+V+ E ++ A+K LK++ + + + E V+ HP
Sbjct: 25 MLGKGSFGKVFLAEF-----KKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 84 NVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCY 143
+ + KE F +MEY+ G L ++S + T +
Sbjct: 80 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS-------------CHKFDLSRATFYAA 126
Query: 144 QVARGMQFLSSRGV------RDGYRLEKPDHCR 170
++ G+QFL S+G+ D L+K H +
Sbjct: 127 EIILGLQFLHSKGIVYRDLKLDNILLDKDGHIK 159
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDP 81
++F+ LG+G F V +C + + G+E ++ + T K +A + ++L+ +E + + L
Sbjct: 14 QLFEELGKGAFSVVRRCVKV-LAGQEYAAMI-INTKKLSARDHQKLE--REARICRLLK- 68
Query: 82 HPNVVRLLGCCTEKEPFFVIMEYVPYGKL 110
HPN+VRL +E+ ++I + V G+L
Sbjct: 69 HPNIVRLHDSISEEGHHYLIFDLVTGGEL 97
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 63/136 (46%), Gaps = 16/136 (11%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDP 81
KV ++LG+G F V++ E++ G E + K AG +R+ E+ + L
Sbjct: 14 KVGNLLGKGSFAGVYRAESIHT-GLEVAIKMIDKKAMYKAGMVQRVQ--NEVKIHCQLK- 69
Query: 82 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 141
HP+++ L + ++++E G++ +L+ +R + + N + F
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLK-NRVKPFSEN-----------EARHF 117
Query: 142 CYQVARGMQFLSSRGV 157
+Q+ GM +L S G+
Sbjct: 118 MHQIITGMLYLHSHGI 133
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ + I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 16 LGKGKFGNVYLARE-----KNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 69
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 70 ILRLYGYFHDSTRVYLILEYAPLGTV 95
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD--LLQELTVMKTLDPHPN 84
LG+G FG V+ ++ I+A+K L + E+ ++ L +E+ + L HPN
Sbjct: 13 LGKGKFGNVYLARE-----KQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPN 66
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
++RL G + ++I+EY P G +
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTV 92
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Query: 20 HIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL----QELTV 75
H + D LG G FG+V K + G + VAVK L N + LD++ +E+
Sbjct: 12 HYVLGDTLGVGTFGKV-KIGEHQLTGHK----VAVKIL--NRQKIRSLDVVGKIKREIQN 64
Query: 76 MKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL 114
+K L HP++++L + FF++MEYV G+L ++
Sbjct: 65 LK-LFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI 102
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Query: 20 HIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLL----QELTV 75
H + D LG G FG+V K + G + VAVK L N + LD++ +E+
Sbjct: 12 HYVLGDTLGVGTFGKV-KIGEHQLTGHK----VAVKIL--NRQKIRSLDVVGKIKREIQN 64
Query: 76 MKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL 114
+K L HP++++L + FF++MEYV G+L ++
Sbjct: 65 LK-LFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI 102
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 13 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 67
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ L+ F+ +S + G L + S+ +Q+
Sbjct: 68 KLLDVIHTENKLYLVFEFLSM-DLKDFMDAS-------ALTGIPLPL----IKSYLFQLL 115
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 116 QGLAFCHSHRV 126
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 14 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 68
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E+V L+ F+ +S + G L + S+ +Q+
Sbjct: 69 KLLDVIHTENKLYLVFEHVDQ-DLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 116
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 117 QGLAFCHSHRV 127
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 12 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 66
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ L+ F+ +S + G L + S+ +Q+
Sbjct: 67 KLLDVIHTENKLYLVFEFLSM-DLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 114
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 115 QGLAFCHSHRV 125
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 27/136 (19%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTL---KENAGERERLDLLQELTVMKTLDPHP 83
LG+G +G VWK ID R G +VAVK + +N+ + +R +E+ ++ L H
Sbjct: 17 LGKGAYGIVWK----SIDRRTGE-VVAVKKIFDAFQNSTDAQR--TFREIMILTELSGHE 69
Query: 84 NVVRLLGC--CTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 141
N+V LL +++ +Y+ L + +R +N L
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYME-TDLHAVIR--------------ANILEPVHKQYV 114
Query: 142 CYQVARGMQFLSSRGV 157
YQ+ + +++L S G+
Sbjct: 115 VYQLIKVIKYLHSGGL 130
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + +E A+K L K+ + +
Sbjct: 22 KWESPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHKETGNHYAMKILDKQKVVKLK 76
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEYVP G++ S LR
Sbjct: 77 QIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 126
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 14 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 68
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ L+ F+ +S + G L + S+ +Q+
Sbjct: 69 KLLDVIHTENKLYLVFEFLSM-DLKDFMDAS-------ALTGIPLPL----IKSYLFQLL 116
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 117 QGLAFCHSHRV 127
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG +G V+K + G + K + E ++E++++K L+ HPN+V
Sbjct: 14 IGEGTYGVVYKAR----NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 68
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+LL + +++ E++ L+ F+ +S + G L + S+ +Q+
Sbjct: 69 KLLDVIHTENKLYLVFEFLSM-DLKKFMDAS-------ALTGIPLPL----IKSYLFQLL 116
Query: 147 RGMQFLSSRGV 157
+G+ F S V
Sbjct: 117 QGLAFCHSHRV 127
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + +E A+K L K+ + +
Sbjct: 22 KWESPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHKETGNHYAMKILDKQKVVKLK 76
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEYVP G++ S LR
Sbjct: 77 QIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 126
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 14/111 (12%)
Query: 8 QKSDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERL 67
QK D + ++ H + D LG G FG+V K + G + VAVK L N + L
Sbjct: 7 QKHDGRVKI--GHYILGDTLGVGTFGKV-KVGKHELTGHK----VAVKIL--NRQKIRSL 57
Query: 68 DLL----QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL 114
D++ +E+ +K L HP++++L + F++MEYV G+L ++
Sbjct: 58 DVVGKIRREIQNLK-LFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYI 107
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + +E A+K L K+ + +
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHKETGNHYAMKILDKQKVVKLK 84
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEYVP G++ S LR
Sbjct: 85 QIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 134
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + +E A+K L K+ + +
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHKETGNHYAMKILDKQKVVKLK 84
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEYVP G++ S LR
Sbjct: 85 QIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 134
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 19/129 (14%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LGEG +G+V+K ID + + E+ E ++E++++K L H N++
Sbjct: 42 LGEGTYGEVYKA----IDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ-HRNII 96
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
L +I EY A+ K+ ++ R + SF YQ+
Sbjct: 97 ELKSVIHHNHRLHLIFEY--------------AENDLKKYMDKNPDVSMRVIKSFLYQLI 142
Query: 147 RGMQFLSSR 155
G+ F SR
Sbjct: 143 NGVNFCHSR 151
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + +E A+K L K+ + +
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHKETGNHYAMKILDKQKVVKLK 84
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEYVP G++ S LR
Sbjct: 85 QIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 134
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + +E A+K L K+ + +
Sbjct: 50 KWESPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHKETGNHYAMKILDKQKVVKLK 104
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEYVP G++ S LR
Sbjct: 105 QIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 154
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 21/147 (14%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP Q ++ +G G +G V C A R+ VAVK L ++ R
Sbjct: 24 WEVP-QRLQGLRPVGSGAYGSV--CSAYDARLRQK---VAVKKLSRPFQSLIHARRT--Y 75
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
+EL ++K L H NV+ LL T P I ++ + +L ++ NN+ KS
Sbjct: 76 RELRLLKHLK-HENVIGLLDVFT---PATSIEDFS-----EVYLVTTLMGADLNNI-VKS 125
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSRGV 157
+L+ + YQ+ RG++++ S G+
Sbjct: 126 QALSDEHVQFLVYQLLRGLKYIHSAGI 152
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + +E A+K L K+ + +
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHKETGNHFAMKILDKQKVVKLK 83
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEYVP G++ S LR
Sbjct: 84 QIEHTLNEKRILQAVN-FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR 133
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + +E A+K L K+ + +
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHKETGNHFAMKILDKQKVVKLK 83
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEYVP G++ S LR
Sbjct: 84 QIEHTLNEKRILQAVN-FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR 133
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + +E A+K L K+ + +
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHKETGNHFAMKILDKQKVVKLK 83
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEYVP G++ S LR
Sbjct: 84 QIEHTLNEKRILQAVN-FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR 133
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLD-LLQELTVMKTLD 80
++ +G+G F +V + + G+E VAVK + + L L +E+ + K L+
Sbjct: 17 RLLKTIGKGNFAKVKLARHI-LTGKE----VAVKIIDKTQLNSSSLQKLFREVRIXKVLN 71
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL 114
HPN+V+L ++ +++ EY G++ +L
Sbjct: 72 -HPNIVKLFEVIETEKTLYLVXEYASGGEVFDYL 104
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDP 81
++F+ LG+G F V +C + + G+E + + T K +A + ++L+ +E + + L
Sbjct: 25 QLFEELGKGAFSVVRRCVKV-LAGQEYAAKI-INTKKLSARDHQKLE--REARICRLLK- 79
Query: 82 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 141
HPN+VRL +E+ ++I + V G+L A+ YY+ +
Sbjct: 80 HPNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLH 136
Query: 142 CYQVA 146
C+Q+
Sbjct: 137 CHQMG 141
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 65/154 (42%), Gaps = 28/154 (18%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL---LQELTVMKTLDPH 82
+LG+G FG+V +E + AVK LK++ ++ D+ + E ++ H
Sbjct: 30 VLGKGSFGKVMLARV-----KETGDLYAVKVLKKDVILQDD-DVECTMTEKRILSLARNH 83
Query: 83 PNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 142
P + +L C + F +ME+V G L ++ SR + + +R +
Sbjct: 84 PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSR----------RFDEARAR---FYA 130
Query: 143 YQVARGMQFLSSRGV------RDGYRLEKPDHCR 170
++ + FL +G+ D L+ HC+
Sbjct: 131 AEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCK 164
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLLQELTVMKTLDPHP 83
+GEG FG V+K G VAVK L + E + QE+ VM H
Sbjct: 39 MGEGGFGVVYK-------GYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ-HE 90
Query: 84 NVVRLLGCCTEKEPFFVIMEYVPYGKL 110
N+V LLG ++ + ++ Y+P G L
Sbjct: 91 NLVELLGFSSDGDDLCLVYVYMPNGSL 117
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 55/144 (38%), Gaps = 21/144 (14%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
WE+ + + +G G FG V+K + G VAVK LK E+ +
Sbjct: 31 WEIEASEVMLSTRIGSGSFGTVYKGKWHG--------DVAVKILKVVDPTPEQFQAFRNE 82
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSL 133
+ H N++ +G T K+ ++ ++ L Y ++H +
Sbjct: 83 VAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSL------------YKHLHVQETKF 129
Query: 134 TSRDLTSFCYQVARGMQFLSSRGV 157
L Q A+GM +L ++ +
Sbjct: 130 QMFQLIDIARQTAQGMDYLHAKNI 153
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLLQELTVMKTLDPHP 83
+GEG FG V+K G VAVK L + E + QE+ VM H
Sbjct: 39 MGEGGFGVVYK-------GYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ-HE 90
Query: 84 NVVRLLGCCTEKEPFFVIMEYVPYGKL 110
N+V LLG ++ + ++ Y+P G L
Sbjct: 91 NLVELLGFSSDGDDLCLVYVYMPNGSL 117
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLLQELTVMKTLDPHP 83
+GEG FG V+K G VAVK L + E + QE+ VM H
Sbjct: 33 MGEGGFGVVYK-------GYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ-HE 84
Query: 84 NVVRLLGCCTEKEPFFVIMEYVPYGKL 110
N+V LLG ++ + ++ Y+P G L
Sbjct: 85 NLVELLGFSSDGDDLCLVYVYMPNGSL 111
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + +E A+K L K+ + +
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHKETGNHYAMKILDKQKVVKLK 84
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEY P G++ S LR
Sbjct: 85 QIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR 134
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 27/116 (23%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDP 81
K +++G G FGQV+K + IDG+ +K +K N + ER E+ + LD
Sbjct: 14 KEIELIGSGGFGQVFKAKHR-IDGK----TYVIKRVKYNNEKAER-----EVKALAKLD- 62
Query: 82 HPNVVRLLGCC----------------TEKEPFFVIMEYVPYGKLQSFLRSSRAQR 121
H N+V GC ++ + F+ ME+ G L+ ++ R ++
Sbjct: 63 HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 118
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDP 81
++F+ LG+G F V +C + I+ K L R+ L +E + + L
Sbjct: 7 QLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL----SARDHQKLEREARICRLLK- 61
Query: 82 HPNVVRLLGCCTEKEPFFVIMEYVPYGKL 110
HPN+VRL +E+ +++ + V G+L
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGEL 90
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 18/129 (13%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+G G GQVWK R+ ++AVK ++ + + E +L +L V+ P +V
Sbjct: 33 MGSGTCGQVWKMRF-----RKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIV 87
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+ G F+ ME L + A++ M G + R L +
Sbjct: 88 QCFGTFITNTDVFIAME----------LMGTCAEKLKKRMQG---PIPERILGKMTVAIV 134
Query: 147 RGMQFLSSR 155
+ + +L +
Sbjct: 135 KALYYLKEK 143
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 82/168 (48%), Gaps = 27/168 (16%)
Query: 4 PVLNQKSDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAG 62
PV ++ D ++ H ++ +G+G FG+V C D ++ + A+K + K+
Sbjct: 4 PVFDENEDVNFD----HFEILRAIGKGSFGKV--CIVQKNDTKK---MYAMKYMNKQKCV 54
Query: 63 ERERL-DLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQR 121
ER + ++ +EL +M+ L+ HP +V L ++E F++++ + G L+ L+
Sbjct: 55 ERNEVRNVFKELQIMQGLE-HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQ----- 108
Query: 122 YYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGVRDGYRLEKPDHC 169
N+H K + + F ++ + +L ++ R +R KPD+
Sbjct: 109 ---NVHFKEET-----VKLFICELVMALDYLQNQ--RIIHRDMKPDNI 146
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + E A+K L K+ + +
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHMETGNHYAMKILDKQKVVKLK 84
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEYVP G++ S LR
Sbjct: 85 QIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 134
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + E A+K L K+ + +
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHMETGNHYAMKILDKQKVVKLK 84
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEYVP G++ S LR
Sbjct: 85 QIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 134
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + E A+K L K+ + +
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHMETGNHYAMKILDKQKVVKLK 83
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEYVP G++ S LR
Sbjct: 84 QIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 133
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + E A+K L K+ + +
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHMETGNHYAMKILDKQKVVKLK 83
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEYVP G++ S LR
Sbjct: 84 QIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 133
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 34.3 bits (77), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + E A+K L K+ + +
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHMETGNHYAMKILDKQKVVKLK 83
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEYVP G++ S LR
Sbjct: 84 QIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 133
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 34.3 bits (77), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDP 81
++F+ LG+G F V +C + I+ K L R+ L +E + + L
Sbjct: 7 QLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL----SARDHQKLEREARICRLLK- 61
Query: 82 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYN 124
HPN+VRL +E+ +++ + V G+L A+ YY+
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYS 101
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 34.3 bits (77), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + E A+K L K+ + +
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHMETGNHYAMKILDKQKVVKLK 83
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEYVP G++ S LR
Sbjct: 84 QIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 133
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 34.3 bits (77), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + E A+K L K+ + +
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHMETGNHYAMKILDKQKVVKLK 84
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEYVP G++ S LR
Sbjct: 85 QIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 134
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.3 bits (77), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + E A+K L K+ + +
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHMETGNHYAMKILDKQKVVKLK 83
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEYVP G++ S LR
Sbjct: 84 QIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 133
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 34.3 bits (77), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + E A+K L K+ + +
Sbjct: 15 KWENPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHMETGNHYAMKILDKQKVVKLK 69
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEYVP G++ S LR
Sbjct: 70 QIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 119
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 34.3 bits (77), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKT 78
Q+ + + +G G +G+V G R A K K + +R QE+ +MK+
Sbjct: 26 QYYTLENTIGRGSWGEVKIAVQKGTRIRRA----AKKIPKYFVEDVDRFK--QEIEIMKS 79
Query: 79 LDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 110
LD HPN++RL + +++ME G+L
Sbjct: 80 LD-HPNIIRLYETFEDNTDIYLVMELCTGGEL 110
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 34.3 bits (77), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LGEG F KC ++ AVK + +R + +E+T +K + HPN+V
Sbjct: 19 LGEGSFSICRKCVH-----KKSNQAFAVKII----SKRMEANTQKEITALKLCEGHPNIV 69
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKL 110
+L ++ F++ME + G+L
Sbjct: 70 KLHEVFHDQLHTFLVMELLNGGEL 93
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 62/141 (43%), Gaps = 21/141 (14%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
P++ F+ +G+G G V+ + G+E VA++ + ++ L ++ E+ VM
Sbjct: 18 PKKKYTRFEKIGQGASGTVYTAMDVAT-GQE----VAIRQMNLQQQPKKEL-IINEILVM 71
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR 136
+ + +PN+V L + +V+MEY+ G L + + +
Sbjct: 72 RE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--------------CMDEG 116
Query: 137 DLTSFCYQVARGMQFLSSRGV 157
+ + C + + ++FL S V
Sbjct: 117 QIAAVCRECLQALEFLHSNQV 137
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 34.3 bits (77), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 13/114 (11%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKT 78
Q+ + + +G G +G+V G R A K K + +R QE+ +MK+
Sbjct: 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRA----AKKIPKYFVEDVDRFK--QEIEIMKS 62
Query: 79 LDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKL------QSFLRSSRAQRYYNNM 126
LD HPN++RL + +++ME G+L + R S A R ++
Sbjct: 63 LD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDV 115
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 33.9 bits (76), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 62/141 (43%), Gaps = 21/141 (14%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
P++ F+ +G+G G V+ + G+E VA++ + ++ L ++ E+ VM
Sbjct: 18 PKKKYTRFEKIGQGASGTVYTAMDVAT-GQE----VAIRQMNLQQQPKKEL-IINEILVM 71
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR 136
+ + +PN+V L + +V+MEY+ G L + + +
Sbjct: 72 RE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--------------CMDEG 116
Query: 137 DLTSFCYQVARGMQFLSSRGV 157
+ + C + + ++FL S V
Sbjct: 117 QIAAVCRECLQALEFLHSNQV 137
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 33.9 bits (76), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 62/141 (43%), Gaps = 21/141 (14%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
P++ F+ +G+G G V+ + G+E VA++ + ++ L ++ E+ VM
Sbjct: 18 PKKKYTRFEKIGQGASGTVYTAMDVAT-GQE----VAIRQMNLQQQPKKEL-IINEILVM 71
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR 136
+ + +PN+V L + +V+MEY+ G L + + +
Sbjct: 72 RE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--------------CMDEG 116
Query: 137 DLTSFCYQVARGMQFLSSRGV 157
+ + C + + ++FL S V
Sbjct: 117 QIAAVCRECLQALEFLHSNQV 137
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 33.9 bits (76), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 62/141 (43%), Gaps = 21/141 (14%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
P++ F+ +G+G G V+ + G+E VA++ + ++ L ++ E+ VM
Sbjct: 19 PKKKYTRFEKIGQGASGTVYTAMDVA-TGQE----VAIRQMNLQQQPKKEL-IINEILVM 72
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR 136
+ + +PN+V L + +V+MEY+ G L + + +
Sbjct: 73 RE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--------------CMDEG 117
Query: 137 DLTSFCYQVARGMQFLSSRGV 157
+ + C + + ++FL S V
Sbjct: 118 QIAAVCRECLQALEFLHSNQV 138
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 33.9 bits (76), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 21/147 (14%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP Q ++ +G G +G V C A R+ VAVK L ++ R
Sbjct: 16 WEVP-QRLQGLRPVGSGAYGSV--CSAYDARLRQK---VAVKKLSRPFQSLIHARRT--Y 67
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
+EL ++K L H NV+ LL T P I ++ + +L ++ NN+ K
Sbjct: 68 RELRLLKHLK-HENVIGLLDVFT---PATSIEDFS-----EVYLVTTLMGADLNNI-VKC 117
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSRGV 157
+L+ + YQ+ RG++++ S G+
Sbjct: 118 QALSDEHVQFLVYQLLRGLKYIHSAGI 144
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 33.9 bits (76), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 62/141 (43%), Gaps = 21/141 (14%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVM 76
P++ F+ +G+G G V+ + G+E VA++ + ++ L ++ E+ VM
Sbjct: 19 PKKKYTRFEKIGQGASGTVYTAMDVA-TGQE----VAIRQMNLQQQPKKEL-IINEILVM 72
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR 136
+ + +PN+V L + +V+MEY+ G L + + +
Sbjct: 73 RE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--------------CMDEG 117
Query: 137 DLTSFCYQVARGMQFLSSRGV 157
+ + C + + ++FL S V
Sbjct: 118 QIAAVCRECLQALEFLHSNQV 138
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 33.9 bits (76), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 21/147 (14%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP Q ++ +G G +G V C A R+ VAVK L ++ R
Sbjct: 24 WEVP-QRLQGLRPVGSGAYGSV--CSAYDARLRQK---VAVKKLSRPFQSLIHARRT--Y 75
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKS 130
+EL ++K L H NV+ LL T P I ++ + +L ++ NN+ K
Sbjct: 76 RELRLLKHLK-HENVIGLLDVFT---PATSIEDFS-----EVYLVTTLMGADLNNI-VKC 125
Query: 131 NSLTSRDLTSFCYQVARGMQFLSSRGV 157
+L+ + YQ+ RG++++ S G+
Sbjct: 126 QALSDEHVQFLVYQLLRGLKYIHSAGI 152
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 33.9 bits (76), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 41/164 (25%)
Query: 20 HIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKT- 78
++K+ +++G G +G V+K +D R P V V + R + + E + +
Sbjct: 14 NLKLLELIGRGRYGAVYKG---SLDER--PVAVKVFSFAN------RQNFINEKNIYRVP 62
Query: 79 LDPHPNVVRLLG-----CCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSL 133
L H N+ R + + + ++MEY P G L +L SL
Sbjct: 63 LMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL-----------------SL 105
Query: 134 TSRDLTSFC---YQVARGMQFLSSRGVR-DGYRLEKPDHCRREL 173
+ D S C + V RG+ +L + R D Y KP R+L
Sbjct: 106 HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHY---KPAISHRDL 146
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 33.9 bits (76), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 159 DGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+G R P+ C L N++ CW +P +RP+F+
Sbjct: 245 EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFS 278
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 33.9 bits (76), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 159 DGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+G R P+ C L N++ CW +P +RP+F+
Sbjct: 245 EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFS 278
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 33.9 bits (76), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 159 DGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+G R P+ C L N++ CW +P +RP+F+
Sbjct: 245 EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFS 278
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 33.5 bits (75), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ +G G FG+V + + E A+K L K+ + +
Sbjct: 29 KWENPAQNTAHLDQFERIKTIGTGSFGRV-----MLVKHMETGNHYAMKILDKQKVVKLK 83
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEYVP G++ S LR
Sbjct: 84 QIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR 133
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 23/142 (16%)
Query: 17 PRQHIKVFDILGEGCFGQVWKCEAL-GIDGREGPCIVAVKTLKENAGERERLDLLQELTV 75
PR + + +GEG G V C A GR+ VAVK + +R L L E+ +
Sbjct: 43 PRLLLDSYVKIGEGSTGIV--CLAREKHSGRQ----VAVKMMDLRKQQRREL-LFNEVVI 95
Query: 76 MKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTS 135
M+ H NVV + E +V+ME++ G L + R L
Sbjct: 96 MRDYQ-HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR--------------LNE 140
Query: 136 RDLTSFCYQVARGMQFLSSRGV 157
+ + C V + + +L ++GV
Sbjct: 141 EQIATVCEAVLQALAYLHAQGV 162
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK--ENAGERERLDLLQELTVMKTL 79
++ D LGEG FG+V +C ID + G VAVK +K + E R + +Q L + T
Sbjct: 17 EIVDTLGEGAFGKVVEC----IDHKAGGRHVAVKIVKNVDRYCEAARSE-IQVLEHLNTT 71
Query: 80 DP 81
DP
Sbjct: 72 DP 73
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK--ENAGERERLDLLQELTVMKTL 79
++ D LGEG FG+V +C ID + G VAVK +K + E R + +Q L + T
Sbjct: 17 EIVDTLGEGAFGKVVEC----IDHKAGGRHVAVKIVKNVDRYCEAARSE-IQVLEHLNTT 71
Query: 80 DP 81
DP
Sbjct: 72 DP 73
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 22/135 (16%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL---LQELTVMKTLDPH 82
+LG+G FG+V E G D + AVK LK++ ++ D+ + E V+
Sbjct: 27 VLGKGSFGKVMLSERKGTDE-----LYAVKILKKDVVIQDD-DVECTMVEKRVLALPGKP 80
Query: 83 PNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 142
P + +L C + + +MEYV G L ++ + +
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-------------QVGRFKEPHAVFYA 127
Query: 143 YQVARGMQFLSSRGV 157
++A G+ FL S+G+
Sbjct: 128 AEIAIGLFFLQSKGI 142
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 20/134 (14%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENA--GERERLDLLQELTVMKTLDPHP 83
+LG+G FG+V E G D + AVK LK++ + + + E V+ P
Sbjct: 348 VLGKGSFGKVMLSERKGTDE-----LYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 402
Query: 84 NVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCY 143
+ +L C + + +MEYV G L Y+ G+ +
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLM----------YHIQQVGR---FKEPHAVFYAA 449
Query: 144 QVARGMQFLSSRGV 157
++A G+ FL S+G+
Sbjct: 450 EIAIGLFFLQSKGI 463
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
Length = 306
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERE-RLDLLQELTVMKTLDP--HP 83
+G G +G V+K D G VA+K+++ GE + ++E+ +++ L+ HP
Sbjct: 12 IGVGAYGTVYKAR----DPHSG-HFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHP 66
Query: 84 NVVRLLGCCT 93
NVVRL+ C
Sbjct: 67 NVVRLMDVCA 76
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + E A+K L K+ + +
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHMETGNHYAMKILDKQKVVKLK 83
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEY P G++ S LR
Sbjct: 84 QIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR 133
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
Length = 306
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERE-RLDLLQELTVMKTLDP--HP 83
+G G +G V+K D G VA+K+++ GE + ++E+ +++ L+ HP
Sbjct: 12 IGVGAYGTVYKAR----DPHSG-HFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHP 66
Query: 84 NVVRLLGCCT 93
NVVRL+ C
Sbjct: 67 NVVRLMDVCA 76
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 21/104 (20%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNV 85
+LG+G FGQV K +D R A+K ++ E + +L E+ ++ +L+ H V
Sbjct: 13 VLGQGAFGQVVKARN-ALDSR----YYAIKKIRHT--EEKLSTILSEVMLLASLN-HQYV 64
Query: 86 VRLLGCCTEKEPF-------------FVIMEYVPYGKLQSFLRS 116
VR E+ F F+ MEY G L + S
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS 108
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ G R+ P C RE+Y++M CW + RP F
Sbjct: 585 LEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFA 620
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + E A+K L K+ + +
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHMETGNHYAMKILDKQKVVKLK 83
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEY P G++ S LR
Sbjct: 84 QIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR 133
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
Length = 306
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERE-RLDLLQELTVMKTLDP--HP 83
+G G +G V+K D G VA+K+++ GE + ++E+ +++ L+ HP
Sbjct: 12 IGVGAYGTVYKAR----DPHSG-HFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHP 66
Query: 84 NVVRLLGCCT 93
NVVRL+ C
Sbjct: 67 NVVRLMDVCA 76
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + E A+K L K+ + +
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHMETGNHYAMKILDKQKVVKLK 83
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEY P G++ S LR
Sbjct: 84 QIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR 133
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ G R+ P C RE+Y++M CW + RP F
Sbjct: 586 LEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFA 621
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 20/141 (14%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK-ENAGERERLDLLQ-ELTVM 76
Q + ++G G + +V L + ++ I A+K +K E + E +D +Q E V
Sbjct: 9 QDFDLLRVIGRGSYAKV-----LLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVF 63
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR 136
+ HP +V L C + F ++EYV G L ++ R L
Sbjct: 64 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR-------------KLPEE 110
Query: 137 DLTSFCYQVARGMQFLSSRGV 157
+ +++ + +L RG+
Sbjct: 111 HARFYSAEISLALNYLHERGI 131
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 20/141 (14%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK-ENAGERERLDLLQ-ELTVM 76
Q + ++G G + +V L + ++ I A+K +K E + E +D +Q E V
Sbjct: 5 QDFDLLRVIGRGSYAKV-----LLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVF 59
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR 136
+ HP +V L C + F ++EYV G L ++ R L
Sbjct: 60 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR-------------KLPEE 106
Query: 137 DLTSFCYQVARGMQFLSSRGV 157
+ +++ + +L RG+
Sbjct: 107 HARFYSAEISLALNYLHERGI 127
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK-ENAGERERLDLLQ-ELTVM 76
Q + ++G G + +V L + ++ I A+K +K E + E +D +Q E V
Sbjct: 20 QDFDLLRVIGRGSYAKV-----LLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVF 74
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSR 118
+ HP +V L C + F ++EYV G L ++ R
Sbjct: 75 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR 116
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN--AGER 64
KWE P Q H+ F+ LG G FG+V + + E A+K L + +
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHMETGNHYAMKILDKQKVVKLK 83
Query: 65 ERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
E L E +++ ++ P +V+L + +++MEY P G++ S LR
Sbjct: 84 EIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR 133
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN--AGER 64
KWE P Q H+ F+ LG G FG+V + + E A+K L + +
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHMETGNHYAMKILDKQKVVKLK 83
Query: 65 ERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
E L E +++ ++ P +V+L + +++MEY P G++ S LR
Sbjct: 84 EIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR 133
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ G R+ P C RE+Y++M CW + RP F
Sbjct: 221 LEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFA 256
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ G R+ P C RE+Y++M CW + RP F
Sbjct: 227 LEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFA 262
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ G R+ P C RE+Y++M CW + RP F
Sbjct: 233 LEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFA 268
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDP 81
+V +G G +G+ K +G +V + + E E+ L+ E+ +++ L
Sbjct: 9 EVLYTIGTGSYGRCQKIRR----KSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK- 63
Query: 82 HPNVVRLLGCCTEKE--PFFVIMEYVPYGKLQSFLRSSRAQRYY 123
HPN+VR ++ +++MEY G L S + +R Y
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY 107
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDP 81
+V +G G +G+ K +G +V + + E E+ L+ E+ +++ L
Sbjct: 9 EVLYTIGTGSYGRCQKIRR----KSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-K 63
Query: 82 HPNVVRLLGCCTEKE--PFFVIMEYVPYGKLQSFLRSSRAQRYY 123
HPN+VR ++ +++MEY G L S + +R Y
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY 107
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ G R+ P C RE+Y++M CW + RP F
Sbjct: 227 LEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFA 262
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK--ENAGERERLDL 69
++ LGEG FG+V +C +D R G VA+K +K E E RL++
Sbjct: 36 EIVSTLGEGTFGRVVQC----VDHRRGGARVALKIIKNVEKYKEAARLEI 81
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ G R+ P C RE+Y++M CW + RP F
Sbjct: 223 LEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFA 258
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDP 81
+V +G G +G+ K +G +V + + E E+ L+ E+ +++ L
Sbjct: 9 EVLYTIGTGSYGRCQKIRR----KSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK- 63
Query: 82 HPNVVRLLGCCTEKE--PFFVIMEYVPYGKLQSFLRSSRAQRYY 123
HPN+VR ++ +++MEY G L S + +R Y
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY 107
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ G R+ P C RE+Y++M CW + RP F
Sbjct: 241 LEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFA 276
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDP 81
++F+ LG+G F V +C I+ K L R+ L +E + + L
Sbjct: 34 QLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKL----SARDHQKLEREARICRLLK- 88
Query: 82 HPNVVRLLGCCTEKEPFFVIMEYVPYGKL 110
HPN+VRL +E+ +++ + V G+L
Sbjct: 89 HPNIVRLHDSISEEGFHYLVFDLVTGGEL 117
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ G R+ P C RE+Y++M CW + RP F
Sbjct: 243 LEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFA 278
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 157 VRDGYRLEKPDHCRRELYNIMYYCWDKEPNERPNFT 192
+ G R+ P C RE+Y++M CW + RP F
Sbjct: 243 LEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFA 278
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERER--LDLLQELTVMKTLDPHPN 84
+G G FG V+ D R +VA+K + + + D+++E+ ++ L HPN
Sbjct: 23 IGHGSFGAVY----FARDVRNSE-VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPN 76
Query: 85 VVRLLGCCTEKEPFFVIMEY 104
++ GC + +++MEY
Sbjct: 77 TIQYRGCYLREHTAWLVMEY 96
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 18 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 69
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 116
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
KS LT + YQ+ RG++++ S +
Sbjct: 117 -VKSQKLTDDHVQFLIYQILRGLKYIHSADI 146
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
W+ + +K +G G +G V K + + I+AVK ++ E+E+ LL +L
Sbjct: 17 WDFTAEDLKDLGEIGRGAYGSVNK-----MVHKPSGQIMAVKRIRSTVDEKEQKQLLMDL 71
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIME 103
V+ P +V+ G + ++ ME
Sbjct: 72 DVVMRSSDCPYIVQFYGALFREGDCWICME 101
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERER--LDLLQELTVMKTLDPHPN 84
+G G FG V+ D R +VA+K + + + D+++E+ ++ L HPN
Sbjct: 62 IGHGSFGAVY----FARDVRNSE-VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPN 115
Query: 85 VVRLLGCCTEKEPFFVIMEY 104
++ GC + +++MEY
Sbjct: 116 TIQYRGCYLREHTAWLVMEY 135
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 55/135 (40%), Gaps = 23/135 (17%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN--AGERERLDLLQELTVM 76
+ K ILGEG F V L RE A+K L++ E + + +E VM
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATS-RE----YAIKILEKRHIIKENKVPYVTRERDVM 91
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRS-----SRAQRYYNN------ 125
LD HP V+L C + E + + Y G+L ++R R+Y
Sbjct: 92 SRLD-HPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 150
Query: 126 --MHGKSNSLTSRDL 138
+HGK + RDL
Sbjct: 151 EYLHGK--GIIHRDL 163
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ +G G FG+V + + E A+K L K+ + +
Sbjct: 29 KWENPAQNTAHLDQFERIKTIGTGSFGRV-----MLVKHMETGNHYAMKILDKQKVVKLK 83
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEY+P G + S LR
Sbjct: 84 QIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR 133
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ +G G FG+V + + E A+K L K+ + +
Sbjct: 29 KWENPAQNTAHLDQFERIKTIGTGSFGRV-----MLVKHMETGNHYAMKILDKQKVVKLK 83
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P +V+L + +++MEY+P G + S LR
Sbjct: 84 QIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR 133
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK-ENAGERERLDLLQ-ELTVM 76
Q + ++G G + +V L + ++ I A++ +K E + E +D +Q E V
Sbjct: 52 QDFDLLRVIGRGSYAKV-----LLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVF 106
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSR 118
+ HP +V L C + F ++EYV G L ++ R
Sbjct: 107 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR 148
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + E A+K L K+ + +
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHMETGNHYAMKILDKQKVVKLK 84
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P + +L + +++MEY P G++ S LR
Sbjct: 85 QIEHTLNEKRILQAVN-FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR 134
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + E A+K L K+ + +
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHMETGNHYAMKILDKQKVVKLK 84
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P + +L + +++MEY P G++ S LR
Sbjct: 85 QIEHTLNEKRILQAVN-FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR 134
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 14/111 (12%)
Query: 13 KWEVPRQ---HIKVFD---ILGEGCFGQVWKCEALGIDGREGPCIVAVKTL-KENAGERE 65
KWE P Q H+ F+ LG G FG+V + + E A+K L K+ + +
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRV-----MLVKHMETGNHYAMKILDKQKVVKLK 84
Query: 66 RLD-LLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLR 115
+++ L E +++ ++ P + +L + +++MEY P G++ S LR
Sbjct: 85 QIEHTLNEKRILQAVN-FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR 134
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 11/86 (12%)
Query: 28 GEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLLQELTVMKTLDPHPN 84
GEG FG V+K G VAVK L + E + QE+ V H N
Sbjct: 31 GEGGFGVVYK-------GYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQ-HEN 82
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKL 110
+V LLG ++ + ++ Y P G L
Sbjct: 83 LVELLGFSSDGDDLCLVYVYXPNGSL 108
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD- 80
++ +LG+G +G+V++ + G I A+K LK+ R D L+
Sbjct: 20 ELLRVLGKGGYGKVFQVRK--VTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEE 77
Query: 81 -PHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 110
HP +V L+ ++I+EY+ G+L
Sbjct: 78 VKHPFIVDLIYAFQTGGKLYLILEYLSGGEL 108
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLD- 80
++ +LG+G +G+V++ + G I A+K LK+ R D L+
Sbjct: 20 ELLRVLGKGGYGKVFQVRK--VTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEE 77
Query: 81 -PHPNVVRLLGCCTEKEPFFVIMEYVPYGKL 110
HP +V L+ ++I+EY+ G+L
Sbjct: 78 VKHPFIVDLIYAFQTGGKLYLILEYLSGGEL 108
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/135 (17%), Positives = 56/135 (41%), Gaps = 19/135 (14%)
Query: 23 VFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPH 82
+ + LG G FG V +C ++ G VA ++ + E+++M L H
Sbjct: 55 ILEELGSGAFGVVHRC----VEKATGRVFVA--KFINTPYPLDKYTVKNEISIMNQLH-H 107
Query: 83 PNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFC 142
P ++ L +K +I+E++ G+L ++ + + ++ ++ ++
Sbjct: 108 PKLINLHDAFEDKYEMVLILEFLSGGEL------------FDRIAAEDYKMSEAEVINYM 155
Query: 143 YQVARGMQFLSSRGV 157
Q G++ + +
Sbjct: 156 RQACEGLKHMHEHSI 170
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+GEG FG+ ++ DGR+ I + + ++ ERE + +E+ V+ + HPN+V
Sbjct: 32 IGEGSFGKAILVKSTE-DGRQ-YVIKEINISRMSSKERE--ESRREVAVLANMK-HPNIV 86
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKL 110
+ E +++M+Y G L
Sbjct: 87 QYRESFEENGSLYIVMDYCEGGDL 110
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 47/131 (35%), Gaps = 15/131 (11%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LG G F V +C I G A K G+ R ++L E+ V++ P V+
Sbjct: 37 LGRGKFAVVRQC----ISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVI 92
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
L +I+EY G++ S A+ N D+ Q+
Sbjct: 93 NLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSEN-----------DVIRLIKQIL 141
Query: 147 RGMQFLSSRGV 157
G+ +L +
Sbjct: 142 EGVYYLHQNNI 152
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDP 81
K +++G G FGQV+K + IDG+ ++ +K N + ER E+ + LD
Sbjct: 15 KEIELIGSGGFGQVFKAKHR-IDGK----TYVIRRVKYNNEKAER-----EVKALAKLD- 63
Query: 82 HPNVVRLLGC 91
H N+V GC
Sbjct: 64 HVNIVHYNGC 73
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 11/134 (8%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNV 85
+LG+G FGQV K +D R A+K ++ E + +L E+ ++ +L+ H V
Sbjct: 13 VLGQGAFGQVVKARN-ALDSR----YYAIKKIRHT--EEKLSTILSEVMLLASLN-HQYV 64
Query: 86 VRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSS--RAQRYYNNMHGKSNSLTSRDLTSFCY 143
VR E+ F M V K F++ + Y+ +H ++ + +
Sbjct: 65 VRYYAAWLERRNFVKPMTAVK-KKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 144 QVARGMQFLSSRGV 157
Q+ + ++ S+G+
Sbjct: 124 QILEALSYIHSQGI 137
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 18 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 69
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 116
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 117 -VKXQKLTDDHVQFLIYQILRGLKYIHSADI 146
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 30.8 bits (68), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 54/131 (41%), Gaps = 20/131 (15%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LG G FG V +C V VK +++ + +E++++ + H N++
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKG-------TDQVLVKKEISIL-NIARHRNIL 64
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
L E +I E++ L F R ++ + L R++ S+ +QV
Sbjct: 65 HLHESFESMEELVMIFEFI--SGLDIFER----------INTSAFELNEREIVSYVHQVC 112
Query: 147 RGMQFLSSRGV 157
+QFL S +
Sbjct: 113 EALQFLHSHNI 123
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 30.4 bits (67), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + I G G +G V C A D + G VAVK L ++ +R
Sbjct: 23 WEVPERYQNLSPI-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 74
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 75 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 121
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 122 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 151
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 30.4 bits (67), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 18 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 69
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 116
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 117 -VKXQKLTDDHVQFLIYQILRGLKYIHSADI 146
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
Length = 303
Score = 30.4 bits (67), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNV 85
+LG+G FGQV K +D R A+K ++ E + +L E+ ++ +L+ H V
Sbjct: 13 VLGQGAFGQVVKARN-ALDSR----YYAIKKIRHT--EEKLSTILSEVXLLASLN-HQYV 64
Query: 86 VRLLGCCTEKEPF 98
VR E+ F
Sbjct: 65 VRYYAAWLERRNF 77
>pdb|2NZW|A Chain A, Crystal Structure Of Alpha1,3-Fucosyltransferase
pdb|2NZW|B Chain B, Crystal Structure Of Alpha1,3-Fucosyltransferase
pdb|2NZW|C Chain C, Crystal Structure Of Alpha1,3-Fucosyltransferase
pdb|2NZX|A Chain A, Crystal Structure Of Alpha1,3-Fucosyltransferase With Gdp
pdb|2NZX|B Chain B, Crystal Structure Of Alpha1,3-Fucosyltransferase With Gdp
pdb|2NZX|C Chain C, Crystal Structure Of Alpha1,3-Fucosyltransferase With Gdp
pdb|2NZY|A Chain A, Crystal Structure Of Alpha1,3-Fucosyltransferase With Gdp-
Fucose
pdb|2NZY|B Chain B, Crystal Structure Of Alpha1,3-Fucosyltransferase With Gdp-
Fucose
pdb|2NZY|C Chain C, Crystal Structure Of Alpha1,3-Fucosyltransferase With Gdp-
Fucose
Length = 371
Score = 30.4 bits (67), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 14/118 (11%)
Query: 56 TLKENAGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEY-VPYGKLQSFL 114
TL +N E L L + + + N R+ + P F + +Y + + +L
Sbjct: 58 TLHQNPNEFSDLVFGNPLGSARKILSYQNAKRVFYTGENESPNFNLFDYAIGFDELDFND 117
Query: 115 RSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGVRDGYRLEKPDHCRRE 172
R R YY+ +H K+ S+ T+ Y++ Y L+KP HC +E
Sbjct: 118 RYLRMPLYYDRLHHKAESVND---TTAPYKLKDNSL----------YALKKPSHCFKE 162
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDP 81
++ LGEG FG+V K G++ + K + + + R++ +E++ ++ L
Sbjct: 16 QIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR- 71
Query: 82 HPNVVRLLGCCTEKEPFFVIMEY 104
HP++++L K+ +++EY
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEY 94
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDP 81
++ LGEG FG+V K G++ + K + + + R++ +E++ ++ L
Sbjct: 7 QIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR- 62
Query: 82 HPNVVRLLGCCTEKEPFFVIMEY 104
HP++++L K+ +++EY
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEY 85
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDP 81
++ LGEG FG+V K G++ + K + + + R++ +E++ ++ L
Sbjct: 17 QIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR- 72
Query: 82 HPNVVRLLGCCTEKEPFFVIMEY 104
HP++++L K+ +++EY
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEY 95
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 59/148 (39%), Gaps = 23/148 (15%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
WEVP ++ + + G G +G V C A D + G + K K +EL
Sbjct: 30 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTGLRVAVKKLSKPFQSIIHAKRTYREL 84
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNMHGK 129
++K + H NV+ LL T P L+ F L + NN+ K
Sbjct: 85 RLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI-VK 130
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSRGV 157
LT + YQ+ RG++++ S +
Sbjct: 131 CQKLTDDHVQFLIYQILRGLKYIHSADI 158
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 24 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 75
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 76 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 122
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 123 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 152
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 19/122 (15%)
Query: 1 MNDPVLNQKSDDKWEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN 60
M+ P+++ D++E+ + +G G FG A + ++ +VAVK ++
Sbjct: 10 MDLPIMHDS--DRYELVKD-------IGSGNFGV-----ARLMRDKQSNELVAVKYIER- 54
Query: 61 AGERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQ 120
GE+ ++ +E+ ++L HPN+VR ++MEY G+L F R A
Sbjct: 55 -GEKIAANVKREIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAG 110
Query: 121 RY 122
R+
Sbjct: 111 RF 112
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDP 81
++ LGEG FG+V K G++ + K + + + R++ +E++ ++ L
Sbjct: 11 QIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR- 66
Query: 82 HPNVVRLLGCCTEKEPFFVIMEY 104
HP++++L K+ +++EY
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEY 89
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 23 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 74
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 75 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 121
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 122 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 151
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 25 DILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
D+LGEG +G+V E L + + +K K ++ +E+ +++ L H N
Sbjct: 11 DLLGEGSYGKVK--EVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR-HKN 67
Query: 85 VVRLLGCC--TEKEPFFVIMEYVPYGKLQSFLRSSRAQRY-YNNMHGKSNSLTSRDLTSF 141
V++L+ EK+ +++MEY G +Q L S +R+ HG F
Sbjct: 68 VIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHG-----------YF 115
Query: 142 CYQVARGMQFLSSRGV 157
C Q+ G+++L S+G+
Sbjct: 116 C-QLIDGLEYLHSQGI 130
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 23/148 (15%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
WEVP ++ + +G G +G V C + D + G I K + +EL
Sbjct: 47 WEVPERY-QTLSPVGSGAYGSV--CSSY--DVKSGLKIAVKKLSRPFQSIIHAKRTYREL 101
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNMHGK 129
++K + H NV+ LL T P L+ F L + NN+ K
Sbjct: 102 RLLKHMK-HENVIGLLDVFT------------PATSLEEFNDVYLVTHLMGADLNNI-VK 147
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSRGV 157
LT + YQ+ RG++++ S +
Sbjct: 148 CQKLTDDHVQFLIYQILRGLKYIHSADI 175
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 25 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 76
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 77 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 123
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 124 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 153
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 24 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 75
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 76 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 122
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 123 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 152
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 23 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 74
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 75 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 121
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 122 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 151
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 18 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 69
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 116
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 117 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 23 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 74
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 75 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 121
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 122 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 151
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 15 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 66
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 67 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 113
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 114 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 143
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 18 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 69
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 116
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 117 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 18 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 69
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 116
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 117 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 18 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 69
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 116
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 117 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 14 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 65
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 66 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 112
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 113 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 142
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 17 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 68
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 69 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 115
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 116 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 145
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 23/148 (15%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
WEVP ++ + + G G +G V C A D + G + K + +EL
Sbjct: 24 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNMHGK 129
++K + H NV+ LL T P L+ F L + NN+ K
Sbjct: 79 RLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI-VK 124
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSRGV 157
LT + YQ+ RG++++ S +
Sbjct: 125 CQKLTDDHVQFLIYQILRGLKYIHSADI 152
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 19 QHIKVFDILGEGCFGQV-WKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMK 77
++ ++ + +G G F +V C L + +VA+K + +N + + E+ +K
Sbjct: 10 KYYELHETIGTGGFAKVKLACHILTGE------MVAIKIMDKNTLGSDLPRIKTEIEALK 63
Query: 78 TLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRS 116
L H ++ +L F+++EY P G+L ++ S
Sbjct: 64 NLR-HQHICQLYHVLETANKIFMVLEYCPGGELFDYIIS 101
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTL 79
LGEG FG+V +C +D G VA+K ++ RE L E+ V+K +
Sbjct: 59 LGEGTFGKVVEC----LDHARGKSQVALKIIRNVGKYREAARL--EINVLKKI 105
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 18 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 69
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 116
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 117 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 18 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 69
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 116
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 117 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 18 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 69
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 116
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 117 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 29 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 80
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 81 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 127
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 128 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 157
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 18 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 69
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 116
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 117 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 18 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 69
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 116
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 117 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 20 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 71
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 72 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 118
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 119 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 148
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 18 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 69
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 116
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 117 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 29 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 80
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 81 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 127
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 128 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 157
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 20 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 71
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 72 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 118
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 119 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 148
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 18 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 69
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 116
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 117 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 20 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 71
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 72 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 118
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 119 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 148
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 18 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 69
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 116
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 117 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 18 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 69
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 116
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 117 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 20 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 71
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 72 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 118
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 119 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 148
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTL 79
LGEG FG+V +C +D G VA+K ++ RE L E+ V+K +
Sbjct: 36 LGEGTFGKVVEC----LDHARGKSQVALKIIRNVGKYREAARL--EINVLKKI 82
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 23/148 (15%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
WEVP ++ + + G G +G V C A D + G + K + +EL
Sbjct: 28 WEVPERYQNLAPV-GSGAYGSV--CAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYREL 82
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNMHGK 129
++K + H NV+ LL T P L+ F L + NN+ K
Sbjct: 83 RLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI-VK 128
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSRGV 157
LT + YQ+ RG++++ S +
Sbjct: 129 CQKLTDDHVQFLIYQILRGLKYIHSADI 156
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTL 79
LGEG FG+V +C +D G VA+K ++ RE L E+ V+K +
Sbjct: 27 LGEGTFGKVVEC----LDHARGKSQVALKIIRNVGKYREAARL--EINVLKKI 73
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 25 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 76
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 77 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 123
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 124 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 153
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 25 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 76
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 77 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 123
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 124 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 153
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 24 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 75
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 76 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 122
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 123 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 152
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 41 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 92
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 93 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 139
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 140 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 169
>pdb|1KQ3|A Chain A, Crystal Structure Of A Glycerol Dehydrogenase (Tm0423)
From Thermotoga Maritima At 1.5 A Resolution
Length = 376
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 33/78 (42%)
Query: 82 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 141
+P+VV + K P ++ + F S Q+Y NM G+ S+T+ L
Sbjct: 156 NPDVVLVDTEIVAKAPARFLVAGMGDALATWFEAESCKQKYAPNMTGRLGSMTAYALARL 215
Query: 142 CYQVARGMQFLSSRGVRD 159
CY+ L+ R V +
Sbjct: 216 CYETLLEYGVLAKRSVEE 233
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 15 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 66
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 67 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 113
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 114 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 143
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 30 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 81
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 82 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 128
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 129 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 158
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 18 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 69
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 70 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 116
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 117 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 25 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 76
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 77 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 123
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 124 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 153
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 30 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 81
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 82 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 128
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 129 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 158
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 23/148 (15%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
WEVP ++ + + G G +G V C A D + G + K + +EL
Sbjct: 18 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNMHGK 129
++K + H NV+ LL T P L+ F L + NN+ K
Sbjct: 73 RLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI-VK 118
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSRGV 157
LT + YQ+ RG++++ S +
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSADI 146
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 16 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 67
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 68 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 114
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 115 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 144
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 37 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 88
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 89 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 135
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 136 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 165
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 23/148 (15%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
WEVP ++ + + G G +G V C A D + G + K + +EL
Sbjct: 18 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNMHGK 129
++K + H NV+ LL T P L+ F L + NN+ K
Sbjct: 73 RLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI-VK 118
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSRGV 157
LT + YQ+ RG++++ S +
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSADI 146
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 38 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 89
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 90 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 136
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 137 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 166
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 23/148 (15%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
WEVP ++ + + G G +G V C A D + G + K + +EL
Sbjct: 14 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYREL 68
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNMHGK 129
++K + H NV+ LL T P L+ F L + NN+ K
Sbjct: 69 RLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI-VK 114
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSRGV 157
LT + YQ+ RG++++ S +
Sbjct: 115 CQKLTDDHVQFLIYQILRGLKYIHSADI 142
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLK---ENAGERERLDLL 70
WEVP ++ + + G G +G V C A D + G VAVK L ++ +R
Sbjct: 41 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTG-LRVAVKKLSRPFQSIIHAKRT--Y 92
Query: 71 QELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNM 126
+EL ++K + H NV+ LL T P L+ F L + NN+
Sbjct: 93 RELRLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI 139
Query: 127 HGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
K LT + YQ+ RG++++ S +
Sbjct: 140 -VKCQKLTDDHVQFLIYQILRGLKYIHSADI 169
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 23/148 (15%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
WEVP ++ + + G G +G V C A D + G + K + +EL
Sbjct: 18 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNMHGK 129
++K + H NV+ LL T P L+ F L + NN+ K
Sbjct: 73 RLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI-VK 118
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSRGV 157
LT + YQ+ RG++++ S +
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSADI 146
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 23/148 (15%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
WEVP ++ + + G G +G V C A D + G + K + +EL
Sbjct: 14 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYREL 68
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNMHGK 129
++K + H NV+ LL T P L+ F L + NN+ K
Sbjct: 69 RLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI-VK 114
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSRGV 157
LT + YQ+ RG++++ S +
Sbjct: 115 CQKLTDDHVQFLIYQILRGLKYIHSADI 142
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 23/148 (15%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
WEVP ++ + + G G +G V C A D + G + K + +EL
Sbjct: 18 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNMHGK 129
++K + H NV+ LL T P L+ F L + NN+ K
Sbjct: 73 RLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI-VK 118
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSRGV 157
LT + YQ+ RG++++ S +
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSADI 146
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 52/125 (41%), Gaps = 8/125 (6%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDP 81
++++ +G+G F V +C L I+ K L R+ L +E + + L
Sbjct: 7 QLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKL----SARDHQKLEREARICRLLK- 61
Query: 82 HPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSF 141
H N+VRL +E+ +++ + V G+L A+ YY+ +
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLH 118
Query: 142 CYQVA 146
C+Q+
Sbjct: 119 CHQMG 123
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 23/148 (15%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
WEVP ++ + + G G +G V C A D + G + K + +EL
Sbjct: 38 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYREL 92
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNMHGK 129
++K + H NV+ LL T P L+ F L + NN+ K
Sbjct: 93 RLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI-VK 138
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSRGV 157
LT + YQ+ RG++++ S +
Sbjct: 139 CQKLTDDHVQFLIYQILRGLKYIHSADI 166
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 23/148 (15%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
WEVP ++ + + G G +G V C A D + G + K + +EL
Sbjct: 37 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYREL 91
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNMHGK 129
++K + H NV+ LL T P L+ F L + NN+ K
Sbjct: 92 RLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI-VK 137
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSRGV 157
LT + YQ+ RG++++ S +
Sbjct: 138 CQKLTDDHVQFLIYQILRGLKYIHSADI 165
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 23/148 (15%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
WEVP ++ + + G G +G V C A D + G + K + +EL
Sbjct: 38 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYREL 92
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNMHGK 129
++K + H NV+ LL T P L+ F L + NN+ K
Sbjct: 93 RLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI-VK 138
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSRGV 157
LT + YQ+ RG++++ S +
Sbjct: 139 CQKLTDDHVQFLIYQILRGLKYIHSADI 166
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 27 LGEGCFGQVWKC--EALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
LG+G F +++K +G G+ V +K L + R + E M + H +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVL--DKAHRNYSESFFEAASMMSKLSHKH 73
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSR 118
+V G C + ++ E+V +G L ++L+ ++
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNK 107
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+G G FG A + ++ +VAVK ++ GE+ ++ +E+ ++L HPN+V
Sbjct: 27 IGAGNFGV-----ARLMRDKQANELVAVKYIER--GEKIDENVKREIINHRSLR-HPNIV 78
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRY 122
R ++MEY G+L F R A R+
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGEL--FERICNAGRF 112
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LG+G F V +C I+ K L R+ L +E + + L HPN+V
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKL----SARDFQKLEREARICRKLQ-HPNIV 91
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKL 110
RL E+ +++ + V G+L
Sbjct: 92 RLHDSIQEESFHYLVFDLVTGGEL 115
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 23/148 (15%)
Query: 14 WEVPRQHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQEL 73
WEVP ++ + + G G +G V C A D + G + K + +EL
Sbjct: 14 WEVPERYQNLSPV-GSGAYGSV--CAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYREL 68
Query: 74 TVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSF----LRSSRAQRYYNNMHGK 129
++K + H NV+ LL T P L+ F L + NN+ K
Sbjct: 69 RLLKHMK-HENVIGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNI-VK 114
Query: 130 SNSLTSRDLTSFCYQVARGMQFLSSRGV 157
LT + YQ+ RG++++ S +
Sbjct: 115 CAKLTDDHVQFLIYQILRGLKYIHSADI 142
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+G G FG A + ++ +VAVK ++ GE+ ++ +E+ ++L HPN+V
Sbjct: 27 IGSGNFGV-----ARLMRDKQSNELVAVKYIER--GEKIDENVKREIINHRSLR-HPNIV 78
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRY 122
R ++MEY G+L F R A R+
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGEL--FERICNAGRF 112
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+G G FG A + ++ +VAVK ++ GE+ ++ +E+ ++L HPN+V
Sbjct: 27 IGSGNFGV-----ARLMRDKQSNELVAVKYIER--GEKIDENVKREIINHRSLR-HPNIV 78
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRY 122
R ++MEY G+L F R A R+
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGEL--FERICNAGRF 112
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 21/141 (14%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN--AGERERLDLLQELTVM 76
+ K ILGEG F V L RE A+K L++ E + + +E VM
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELAT-SRE----YAIKILEKRHIIKENKVPYVTRERDVM 63
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR 136
LD HP V+L + E + + Y G+L ++R G + +R
Sbjct: 64 SRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSFDETCTR 112
Query: 137 DLTSFCYQVARGMQFLSSRGV 157
T+ ++ +++L +G+
Sbjct: 113 FYTA---EIVSALEYLHGKGI 130
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
+G G FG A + ++ +VAVK ++ GE+ ++ +E+ ++L HPN+V
Sbjct: 26 IGSGNFGV-----ARLMRDKQSNELVAVKYIER--GEKIDENVKREIINHRSLR-HPNIV 77
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRY 122
R ++MEY G+L F R A R+
Sbjct: 78 RFKEVILTPTHLAIVMEYASGGEL--FERICNAGRF 111
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENA--GERERLDLLQELTVMKTLDPHP 83
++G+G FG+V L + AVK L++ A ++E ++ E V+ HP
Sbjct: 45 VIGKGSFGKV-----LLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 84 NVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSR 118
+V L + + +++Y+ G+L L+ R
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRER 134
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LG+G F V +C I+ K L R+ L +E + + L HPN+V
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKL----SARDFQKLEREARICRKLQ-HPNIV 68
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKL 110
RL E+ +++ + V G+L
Sbjct: 69 RLHDSIQEESFHYLVFDLVTGGEL 92
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 21/141 (14%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN--AGERERLDLLQELTVM 76
+ K ILGEG F V L RE A+K L++ E + + +E VM
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELAT-SRE----YAIKILEKRHIIKENKVPYVTRERDVM 64
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSR 136
LD HP V+L + E + + Y G+L ++R G + +R
Sbjct: 65 SRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSFDETCTR 113
Query: 137 DLTSFCYQVARGMQFLSSRGV 157
T+ ++ +++L +G+
Sbjct: 114 FYTA---EIVSALEYLHGKGI 131
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 21/134 (15%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN--AGERERLDLLQELTVMKTLDPHP 83
ILGEG F V L RE A+K L++ E + + +E VM LD HP
Sbjct: 15 ILGEGSFSTVVLARELAT-SRE----YAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 68
Query: 84 NVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCY 143
V+L + E + + Y G+L ++R G + +R T+
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSFDETCTRFYTA--- 115
Query: 144 QVARGMQFLSSRGV 157
++ +++L +G+
Sbjct: 116 EIVSALEYLHGKGI 129
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 21/134 (15%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN--AGERERLDLLQELTVMKTLDPHP 83
ILGEG F V L RE A+K L++ E + + +E VM LD HP
Sbjct: 36 ILGEGSFSTVVLARELAT-SRE----YAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 89
Query: 84 NVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCY 143
V+L + E + + Y G+L ++R G + +R T+
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSFDETCTRFYTA--- 136
Query: 144 QVARGMQFLSSRGV 157
++ +++L +G+
Sbjct: 137 EIVSALEYLHGKGI 150
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 21/134 (15%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN--AGERERLDLLQELTVMKTLDPHP 83
ILGEG F V L RE A+K L++ E + + +E VM LD HP
Sbjct: 36 ILGEGSFSTVVLARELAT-SRE----YAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 89
Query: 84 NVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCY 143
V+L + E + + Y G+L ++R G + +R T+
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSFDETCTRFYTA--- 136
Query: 144 QVARGMQFLSSRGV 157
++ +++L +G+
Sbjct: 137 EIVSALEYLHGKGI 150
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LG+G F V +C I+ K L R+ L +E + + L HPN+V
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKL----SARDFQKLEREARICRKLQ-HPNIV 67
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKL 110
RL E+ +++ + V G+L
Sbjct: 68 RLHDSIQEESFHYLVFDLVTGGEL 91
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LG+G F V +C I+ K L R+ L +E + + L HPN+V
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKL----SARDFQKLEREARICRKLQ-HPNIV 68
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKL 110
RL E+ +++ + V G+L
Sbjct: 69 RLHDSIQEESFHYLVFDLVTGGEL 92
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 52/128 (40%), Gaps = 23/128 (17%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN--AGERERLDLLQELTVMKTLDPHP 83
ILGEG F V L RE A+K L++ E + + +E VM LD HP
Sbjct: 14 ILGEGSFSTVVLARELAT-SRE----YAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 67
Query: 84 NVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRS-----SRAQRYYNN--------MHGKS 130
V+L + E + + Y G+L ++R R+Y +HGK
Sbjct: 68 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK- 126
Query: 131 NSLTSRDL 138
+ RDL
Sbjct: 127 -GIIHRDL 133
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/45 (24%), Positives = 26/45 (57%)
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL 114
L+E+ +++ + HPN+++L FF++ + + G+L +L
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL 115
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/45 (24%), Positives = 26/45 (57%)
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL 114
L+E+ +++ + HPN+++L FF++ + + G+L +L
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL 115
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 21/134 (15%)
Query: 26 ILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN--AGERERLDLLQELTVMKTLDPHP 83
ILGEG F V L RE A+K L++ E + + +E VM LD HP
Sbjct: 21 ILGEGSFSTVVLARELAT-SRE----YAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 74
Query: 84 NVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCY 143
V+L + E + + Y G+L ++R G + +R T+
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----------GSFDETCTRFYTA--- 121
Query: 144 QVARGMQFLSSRGV 157
++ +++L +G+
Sbjct: 122 EIVSALEYLHGKGI 135
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/45 (24%), Positives = 26/45 (57%)
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL 114
L+E+ +++ + HPN+++L FF++ + + G+L +L
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL 102
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 23/135 (17%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN--AGERERLDLLQELTVM 76
+ K ILGEG F V L RE A+K L++ E + + +E VM
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATS-RE----YAIKILEKRHIIKENKVPYVTRERDVM 84
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRS-----SRAQRYYNN------ 125
LD HP V+L + E + + Y G+L ++R R+Y
Sbjct: 85 SRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 143
Query: 126 --MHGKSNSLTSRDL 138
+HGK + RDL
Sbjct: 144 EYLHGK--GIIHRDL 156
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 23/135 (17%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN--AGERERLDLLQELTVM 76
+ K ILGEG F V L RE A+K L++ E + + +E VM
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATS-RE----YAIKILEKRHIIKENKVPYVTRERDVM 86
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRS-----SRAQRYYNN------ 125
LD HP V+L + E + + Y G+L ++R R+Y
Sbjct: 87 SRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 145
Query: 126 --MHGKSNSLTSRDL 138
+HGK + RDL
Sbjct: 146 EYLHGK--GIIHRDL 158
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 27 LGEGCFGQVWKC--EALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPN 84
LG+G F +++K +G G+ V +K L + R + E M + H +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVL--DKAHRNYSESFFEAASMMSKLSHKH 73
Query: 85 VVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSR 118
+V G C + ++ E+V +G L ++L+ ++
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNK 107
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 23/135 (17%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN--AGERERLDLLQELTVM 76
+ K ILGEG F V L RE A+K L++ E + + +E VM
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATS-RE----YAIKILEKRHIIKENKVPYVTRERDVM 86
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRS-----SRAQRYYNN------ 125
LD HP V+L + E + + Y G+L ++R R+Y
Sbjct: 87 SRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 145
Query: 126 --MHGKSNSLTSRDL 138
+HGK + RDL
Sbjct: 146 EYLHGK--GIIHRDL 158
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 23/135 (17%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN--AGERERLDLLQELTVM 76
+ K ILGEG F V L RE A+K L++ E + + +E VM
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATS-RE----YAIKILEKRHIIKENKVPYVTRERDVM 87
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRS-----SRAQRYYNN------ 125
LD HP V+L + E + + Y G+L ++R R+Y
Sbjct: 88 SRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 146
Query: 126 --MHGKSNSLTSRDL 138
+HGK + RDL
Sbjct: 147 EYLHGK--GIIHRDL 159
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 23/135 (17%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN--AGERERLDLLQELTVM 76
+ K ILGEG F V L RE A+K L++ E + + +E VM
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATS-RE----YAIKILEKRHIIKENKVPYVTRERDVM 84
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRS-----SRAQRYYNN------ 125
LD HP V+L + E + + Y G+L ++R R+Y
Sbjct: 85 SRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 143
Query: 126 --MHGKSNSLTSRDL 138
+HGK + RDL
Sbjct: 144 EYLHGK--GIIHRDL 156
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 23/135 (17%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN--AGERERLDLLQELTVM 76
+ K ILGEG F V L RE A+K L++ E + + +E VM
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATS-RE----YAIKILEKRHIIKENKVPYVTRERDVM 87
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRS-----SRAQRYYNN------ 125
LD HP V+L + E + + Y G+L ++R R+Y
Sbjct: 88 SRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 146
Query: 126 --MHGKSNSLTSRDL 138
+HGK + RDL
Sbjct: 147 EYLHGK--GIIHRDL 159
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 23/135 (17%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN--AGERERLDLLQELTVM 76
+ K ILGEG F V L RE A+K L++ E + + +E VM
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATS-RE----YAIKILEKRHIIKENKVPYVTRERDVM 84
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRS-----SRAQRYYNN------ 125
LD HP V+L + E + + Y G+L ++R R+Y
Sbjct: 85 SRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 143
Query: 126 --MHGKSNSLTSRDL 138
+HGK + RDL
Sbjct: 144 EYLHGK--GIIHRDL 156
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 23/135 (17%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN--AGERERLDLLQELTVM 76
+ K ILGEG F V L RE A+K L++ E + + +E VM
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATS-RE----YAIKILEKRHIIKENKVPYVTRERDVM 86
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRA-----QRYYNN------ 125
LD HP V+L + E + + Y G+L ++R + R+Y
Sbjct: 87 SRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 145
Query: 126 --MHGKSNSLTSRDL 138
+HGK + RDL
Sbjct: 146 EYLHGK--GIIHRDL 158
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 23/135 (17%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN--AGERERLDLLQELTVM 76
+ K ILGEG F V L RE A+K L++ E + + +E VM
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATS-RE----YAIKILEKRHIIKENKVPYVTRERDVM 86
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRS-----SRAQRYYNN------ 125
LD HP V+L + E + + Y G+L ++R R+Y
Sbjct: 87 SRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 145
Query: 126 --MHGKSNSLTSRDL 138
+HGK + RDL
Sbjct: 146 EYLHGK--GIIHRDL 158
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 23/135 (17%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN--AGERERLDLLQELTVM 76
+ K ILGEG F V L RE A+K L++ E + + +E VM
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATS-RE----YAIKILEKRHIIKENKVPYVTRERDVM 86
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRS-----SRAQRYYNN------ 125
LD HP V+L + E + + Y G+L ++R R+Y
Sbjct: 87 SRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 145
Query: 126 --MHGKSNSLTSRDL 138
+HGK + RDL
Sbjct: 146 EYLHGK--GIIHRDL 158
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 23/135 (17%)
Query: 19 QHIKVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKEN--AGERERLDLLQELTVM 76
+ K ILGEG F V L RE A+K L++ E + + +E VM
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATS-RE----YAIKILEKRHIIKENKVPYVTRERDVM 89
Query: 77 KTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRS-----SRAQRYYNN------ 125
LD HP V+L + E + + Y G+L ++R R+Y
Sbjct: 90 SRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 148
Query: 126 --MHGKSNSLTSRDL 138
+HGK + RDL
Sbjct: 149 EYLHGK--GIIHRDL 161
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/96 (17%), Positives = 47/96 (48%), Gaps = 15/96 (15%)
Query: 63 ERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGK-LQSFLRSSRAQR 121
++ + D +E+ ++ HPN++ L + + +V+ E + G+ L LR Q+
Sbjct: 56 DKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILR----QK 111
Query: 122 YYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
++ + R+ ++ + + + +++L ++GV
Sbjct: 112 FF----------SEREASAVLFTITKTVEYLHAQGV 137
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 19/131 (14%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LGEG +G+V L ++ R VAVK + ++ +E+ + K L+ H NVV
Sbjct: 15 LGEGAYGEV----QLAVN-RVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLN-HENVV 68
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+ G E ++ +EY G+L + + D F +Q+
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------------MPEPDAQRFFHQLM 115
Query: 147 RGMQFLSSRGV 157
G+ +L G+
Sbjct: 116 AGVVYLHGIGI 126
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 19/131 (14%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LGEG +G+V L ++ R VAVK + ++ +E+ + K L+ H NVV
Sbjct: 14 LGEGAYGEV----QLAVN-RVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLN-HENVV 67
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+ G E ++ +EY G+L + + D F +Q+
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------------MPEPDAQRFFHQLM 114
Query: 147 RGMQFLSSRGV 157
G+ +L G+
Sbjct: 115 AGVVYLHGIGI 125
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDL----LQELTVMKTLDP- 81
+G G +G V+K D G VA+K+++ G L ++E+ +++ L+
Sbjct: 17 IGVGAYGTVYKAR----DPHSG-HFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAF 71
Query: 82 -HPNVVRLLGCCT 93
HPNVVRL+ C
Sbjct: 72 EHPNVVRLMDVCA 84
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQS-FLRSSRAQRYYNNMHG 128
L+EL ++K H N++ + ++ VPYG+ +S ++ + + +
Sbjct: 101 LRELKILKHFK-HDNIIAIKD---------ILRPTVPYGEFKSVYVVLDLMESDLHQIIH 150
Query: 129 KSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
S LT + F YQ+ RG++++ S V
Sbjct: 151 SSQPLTLEHVRYFLYQLLRGLKYMHSAQV 179
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/96 (17%), Positives = 46/96 (47%), Gaps = 15/96 (15%)
Query: 63 ERERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGK-LQSFLRSSRAQR 121
++ + D +E+ ++ HPN++ L + + +V+ E G+ L LR Q+
Sbjct: 56 DKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILR----QK 111
Query: 122 YYNNMHGKSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
++ + R+ ++ + + + +++L ++GV
Sbjct: 112 FF----------SEREASAVLFTITKTVEYLHAQGV 137
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 70 LQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQS-FLRSSRAQRYYNNMHG 128
L+EL ++K H N++ + ++ VPYG+ +S ++ + + +
Sbjct: 102 LRELKILKHFK-HDNIIAIKD---------ILRPTVPYGEFKSVYVVLDLMESDLHQIIH 151
Query: 129 KSNSLTSRDLTSFCYQVARGMQFLSSRGV 157
S LT + F YQ+ RG++++ S V
Sbjct: 152 SSQPLTLEHVRYFLYQLLRGLKYMHSAQV 180
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 19/131 (14%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LGEG +G+V L ++ R VAVK + ++ +E+ + K L+ H NVV
Sbjct: 14 LGEGAYGEV----QLAVN-RVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLN-HENVV 67
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+ G E ++ +EY G+L + + D F +Q+
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------------MPEPDAQRFFHQLM 114
Query: 147 RGMQFLSSRGV 157
G+ +L G+
Sbjct: 115 AGVVYLHGIGI 125
>pdb|3UMV|A Chain A, Eukaryotic Class Ii Cpd Photolyase Structure Reveals A
Basis For Improved Uv-Tolerance In Plants
pdb|3UMV|B Chain B, Eukaryotic Class Ii Cpd Photolyase Structure Reveals A
Basis For Improved Uv-Tolerance In Plants
Length = 506
Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 15/93 (16%)
Query: 44 DGREGPCIVAVKTLKENAGE-RERLDLLQELTVMKTLDPHPNVVRLLGCCTEKEPFFVIM 102
D G A KTL ++A + RE + ++L KT DP N +L
Sbjct: 338 DSLSGAWEWARKTLMDHAADKREHIYTREQLENAKTHDPLWNASQL-------------- 383
Query: 103 EYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTS 135
E V +GK+ F+R A++ G +L++
Sbjct: 384 EMVHHGKMHGFMRMYWAKKILEWTSGPEEALST 416
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 19/131 (14%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LGEG +G+V L ++ R VAVK + ++ +E+ + K L+ H NVV
Sbjct: 14 LGEGAYGEV----QLAVN-RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-HENVV 67
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+ G E ++ +EY G+L + + D F +Q+
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------------MPEPDAQRFFHQLM 114
Query: 147 RGMQFLSSRGV 157
G+ +L G+
Sbjct: 115 AGVVYLHGIGI 125
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Query: 22 KVFDILGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERER-LDLLQELTVMKTLD 80
K+ D LG G V+ E ++ + VA+K + E+E L + +
Sbjct: 14 KIVDKLGGGGMSTVYLAEDTILNIK-----VAIKAIFIPPREKEETLKRFEREVHNSSQL 68
Query: 81 PHPNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFLRS 116
H N+V ++ E + ++++MEY+ L ++ S
Sbjct: 69 SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES 104
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 19/131 (14%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LGEG +G+V L ++ R VAVK + ++ +E+ + K L+ H NVV
Sbjct: 14 LGEGAYGEV----QLAVN-RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-HENVV 67
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+ G E ++ +EY G+L + + D F +Q+
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------------MPEPDAQRFFHQLM 114
Query: 147 RGMQFLSSRGV 157
G+ +L G+
Sbjct: 115 AGVVYLHGIGI 125
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 19/131 (14%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LGEG +G+V L ++ R VAVK + ++ +E+ + K L+ H NVV
Sbjct: 15 LGEGAYGEV----QLAVN-RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-HENVV 68
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+ G E ++ +EY G+L + + D F +Q+
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------------MPEPDAQRFFHQLM 115
Query: 147 RGMQFLSSRGV 157
G+ +L G+
Sbjct: 116 AGVVYLHGIGI 126
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 19/131 (14%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LGEG +G+V L ++ R VAVK + ++ +E+ + K L+ H NVV
Sbjct: 15 LGEGAYGEV----QLAVN-RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-HENVV 68
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+ G E ++ +EY G+L + + D F +Q+
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------------MPEPDAQRFFHQLM 115
Query: 147 RGMQFLSSRGV 157
G+ +L G+
Sbjct: 116 AGVVYLHGIGI 126
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 19/131 (14%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LGEG +G+V L ++ R VAVK + ++ +E+ + K L+ H NVV
Sbjct: 14 LGEGAYGEV----QLAVN-RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-HENVV 67
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+ G E ++ +EY G+L + + D F +Q+
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------------MPEPDAQRFFHQLM 114
Query: 147 RGMQFLSSRGV 157
G+ +L G+
Sbjct: 115 AGVVYLHGIGI 125
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 19/131 (14%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LGEG +G+V L ++ R VAVK + ++ +E+ + K L+ H NVV
Sbjct: 14 LGEGAYGEV----QLAVN-RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-HENVV 67
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+ G E ++ +EY G+L + + D F +Q+
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------------MPEPDAQRFFHQLM 114
Query: 147 RGMQFLSSRGV 157
G+ +L G+
Sbjct: 115 AGVVYLHGIGI 125
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 19/131 (14%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LGEG +G+V L ++ R VAVK + ++ +E+ + K L+ H NVV
Sbjct: 14 LGEGAYGEV----QLAVN-RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-HENVV 67
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+ G E ++ +EY G+L + + D F +Q+
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------------MPEPDAQRFFHQLM 114
Query: 147 RGMQFLSSRGV 157
G+ +L G+
Sbjct: 115 AGVVYLHGIGI 125
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 12/106 (11%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LGEG +G+V L ++ R VAVK + ++ +E+ + K L+ H NVV
Sbjct: 14 LGEGAYGEV----QLAVN-RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-HENVV 67
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSS------RAQRYYNNM 126
+ G E ++ +EY G+L + AQR+++ +
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 19/131 (14%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LGEG +G+V L ++ R VAVK + ++ +E+ + K L+ H NVV
Sbjct: 14 LGEGAYGEV----QLAVN-RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-HENVV 67
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+ G E ++ +EY G+L + + D F +Q+
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------------MPEPDAQRFFHQLM 114
Query: 147 RGMQFLSSRGV 157
G+ +L G+
Sbjct: 115 AGVVYLHGIGI 125
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 19/131 (14%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LGEG +G+V L ++ R VAVK + ++ +E+ + K L+ H NVV
Sbjct: 13 LGEGAYGEV----QLAVN-RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-HENVV 66
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+ G E ++ +EY G+L + + D F +Q+
Sbjct: 67 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------------MPEPDAQRFFHQLM 113
Query: 147 RGMQFLSSRGV 157
G+ +L G+
Sbjct: 114 AGVVYLHGIGI 124
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 27.3 bits (59), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 12/106 (11%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LGEG +G+V L ++ R VAVK + ++ +E+ + K L+ H NVV
Sbjct: 15 LGEGAYGEV----QLAVN-RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-HENVV 68
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSS------RAQRYYNNM 126
+ G E ++ +EY G+L + AQR+++ +
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 27.3 bits (59), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 19/131 (14%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LGEG +G+V L ++ R VAVK + ++ +E+ + K L+ H NVV
Sbjct: 14 LGEGAYGEV----QLAVN-RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-HENVV 67
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+ G E ++ +EY G+L + + D F +Q+
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------------MPEPDAQRFFHQLM 114
Query: 147 RGMQFLSSRGV 157
G+ +L G+
Sbjct: 115 AGVVYLHGIGI 125
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 27.3 bits (59), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 19/131 (14%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LGEG +G+V L ++ R VAVK + ++ +E+ + K L+ H NVV
Sbjct: 14 LGEGAYGEV----QLAVN-RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-HENVV 67
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+ G E ++ +EY G+L + + D F +Q+
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------------MPEPDAQRFFHQLM 114
Query: 147 RGMQFLSSRGV 157
G+ +L G+
Sbjct: 115 AGVVYLHGIGI 125
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Query: 25 DILGEGCFGQVWKC--EALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPH 82
D++G G V +C A G + V + L E R +E +++ + H
Sbjct: 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH 159
Query: 83 PNVVRLLGCCTEKEPFFVIMEYVPYGKLQSFL 114
P+++ L+ F++ + + G+L +L
Sbjct: 160 PHIITLIDSYESSSFMFLVFDLMRKGELFDYL 191
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 26.9 bits (58), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 19/131 (14%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LGEG +G+V L ++ R VAVK + ++ +E+ + K L+ H NVV
Sbjct: 15 LGEGAYGEV----QLAVN-RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-HENVV 68
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+ G E ++ +EY G+L + + D F +Q+
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------------MPEPDAQRFFHQLM 115
Query: 147 RGMQFLSSRGV 157
G+ +L G+
Sbjct: 116 AGVVYLHGIGI 126
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 26.9 bits (58), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 19/131 (14%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LGEG +G+V L ++ R VAVK + ++ +E+ + K L+ H NVV
Sbjct: 15 LGEGAYGEV----QLAVN-RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-HENVV 68
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+ G E ++ +EY G+L + + D F +Q+
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------------MPEPDAQRFFHQLM 115
Query: 147 RGMQFLSSRGV 157
G+ +L G+
Sbjct: 116 AGVVYLHGIGI 126
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 26.9 bits (58), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 19/131 (14%)
Query: 27 LGEGCFGQVWKCEALGIDGREGPCIVAVKTLKENAGERERLDLLQELTVMKTLDPHPNVV 86
LGEG +G+V L ++ R VAVK + ++ +E+ + K L+ H NVV
Sbjct: 15 LGEGAYGEV----QLAVN-RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN-HENVV 68
Query: 87 RLLGCCTEKEPFFVIMEYVPYGKLQSFLRSSRAQRYYNNMHGKSNSLTSRDLTSFCYQVA 146
+ G E ++ +EY G+L + + D F +Q+
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-------------MPEPDAQRFFHQLM 115
Query: 147 RGMQFLSSRGV 157
G+ +L G+
Sbjct: 116 AGVVYLHGIGI 126
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.139 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,872,074
Number of Sequences: 62578
Number of extensions: 260270
Number of successful extensions: 2027
Number of sequences better than 100.0: 738
Number of HSP's better than 100.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 328
Number of HSP's that attempted gapping in prelim test: 770
Number of HSP's gapped (non-prelim): 1085
length of query: 230
length of database: 14,973,337
effective HSP length: 96
effective length of query: 134
effective length of database: 8,965,849
effective search space: 1201423766
effective search space used: 1201423766
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)