Query psy15831
Match_columns 304
No_of_seqs 152 out of 1080
Neff 7.4
Searched_HMMs 46136
Date Fri Aug 16 22:27:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15831.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15831hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0154 GatA Asp-tRNAAsn/Glu-t 100.0 8.2E-72 1.8E-76 546.7 25.4 276 2-295 41-328 (475)
2 PF01425 Amidase: Amidase; In 100.0 9.9E-72 2.1E-76 537.6 24.6 261 2-279 17-289 (441)
3 PRK07487 amidase; Provisional 100.0 4.8E-70 1E-74 535.9 28.4 265 2-279 42-310 (469)
4 PRK00012 gatA aspartyl/glutamy 100.0 4.9E-70 1.1E-74 534.7 27.9 260 1-279 25-294 (459)
5 PRK05962 amidase; Validated 100.0 5.6E-70 1.2E-74 529.3 26.0 247 2-270 15-262 (424)
6 PRK06170 amidase; Provisional 100.0 2.2E-69 4.7E-74 534.0 28.8 267 1-280 45-322 (490)
7 PRK06169 putative amidase; Pro 100.0 4.8E-69 1E-73 528.5 28.0 251 1-270 40-300 (466)
8 TIGR00132 gatA glutamyl-tRNA(G 100.0 3.8E-69 8.2E-74 528.6 27.2 254 1-278 29-292 (460)
9 PRK07056 amidase; Provisional 100.0 4.4E-69 9.6E-74 527.1 26.3 255 2-278 41-301 (454)
10 PRK06102 hypothetical protein; 100.0 5.2E-69 1.1E-73 526.3 26.4 254 2-277 39-296 (452)
11 PRK07488 indole acetimide hydr 100.0 9.2E-69 2E-73 527.3 26.7 248 2-273 44-292 (472)
12 PRK07042 amidase; Provisional 100.0 1.7E-68 3.6E-73 524.4 28.3 249 1-270 40-296 (464)
13 PRK07486 amidase; Provisional 100.0 2.5E-68 5.4E-73 525.7 28.1 253 1-270 45-308 (484)
14 PRK08137 amidase; Provisional 100.0 1.7E-68 3.8E-73 528.3 25.9 248 2-270 43-308 (497)
15 TIGR02715 amido_AtzE amidohydr 100.0 4.5E-68 9.8E-73 519.8 26.1 241 2-259 34-284 (452)
16 PRK12470 amidase; Provisional 100.0 5.9E-68 1.3E-72 520.1 26.2 251 2-270 43-295 (462)
17 PRK09201 amidase; Provisional 100.0 9.7E-68 2.1E-72 519.0 26.0 242 1-259 40-291 (465)
18 PRK07869 amidase; Provisional 100.0 1.1E-67 2.4E-72 519.1 26.2 247 2-270 49-298 (468)
19 PRK06061 amidase; Provisional 100.0 3.6E-67 7.9E-72 517.0 27.8 253 2-270 52-311 (483)
20 PRK06529 amidase; Provisional 100.0 9.9E-67 2.1E-71 514.1 26.9 256 1-279 37-304 (482)
21 PRK07235 amidase; Provisional 100.0 5E-67 1.1E-71 517.5 23.9 260 2-279 58-328 (502)
22 TIGR02713 allophanate_hyd allo 100.0 1.7E-66 3.6E-71 517.9 27.4 249 3-270 2-256 (561)
23 PRK08186 allophanate hydrolase 100.0 1.9E-66 4.2E-71 521.8 25.6 250 2-272 40-296 (600)
24 PRK06828 amidase; Provisional 100.0 3.4E-66 7.3E-71 509.8 25.9 252 2-270 50-324 (491)
25 PRK11910 amidase; Provisional 100.0 7E-66 1.5E-70 512.5 27.9 247 2-276 202-455 (615)
26 PRK06707 amidase; Provisional 100.0 1.9E-64 4.2E-69 500.7 25.9 246 2-270 108-375 (536)
27 PRK07139 amidase; Provisional 100.0 2.3E-64 5.1E-69 491.6 23.3 246 9-270 7-257 (439)
28 PRK06565 amidase; Validated 100.0 4E-64 8.7E-69 496.5 25.0 254 2-270 46-342 (566)
29 PRK08310 amidase; Provisional 100.0 3E-62 6.5E-67 471.2 23.7 215 36-270 22-238 (395)
30 PLN02722 indole-3-acetamide am 100.0 2.2E-61 4.8E-66 468.1 20.4 215 37-270 24-242 (422)
31 KOG1211|consensus 100.0 1.4E-59 3E-64 453.5 14.4 275 2-294 51-347 (506)
32 KOG1212|consensus 100.0 1E-56 2.3E-61 437.3 19.6 285 1-301 88-385 (560)
33 PRK15468 carboxysome structura 54.4 31 0.00067 27.3 4.8 70 185-268 39-108 (111)
34 COG1797 CobB Cobyrinic acid a, 37.3 1.1E+02 0.0023 30.5 6.6 36 223-270 244-279 (451)
35 KOG1212|consensus 34.8 15 0.00032 37.4 0.4 108 62-175 192-301 (560)
36 COG3221 PhnD ABC-type phosphat 27.4 1.7E+02 0.0036 27.4 6.1 50 222-279 34-84 (299)
37 COG3603 Uncharacterized conser 22.9 59 0.0013 26.3 1.8 19 247-266 109-127 (128)
38 PF05221 AdoHcyase: S-adenosyl 21.4 90 0.0019 28.8 2.9 37 36-90 37-73 (268)
39 PF06591 Phage_T4_Ndd: T4-like 20.9 84 0.0018 26.2 2.4 25 76-100 5-29 (152)
No 1
>COG0154 GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=8.2e-72 Score=546.74 Aligned_cols=276 Identities=34% Similarity=0.454 Sum_probs=241.2
Q ss_pred eeEEEecCHHHHHH--HHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCCCcchHHHHH
Q psy15831 2 LNAVVDERFNLALE--EAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRL 79 (304)
Q Consensus 2 lna~~~~~~~~al~--~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~ 79 (304)
+||++....|+++. +|+++|+++++|+ ..+||+||||+|||||+++|++||+||+.++++++++|+++|+|
T Consensus 41 ~na~~~~~~e~a~~~~~A~~~d~~~~~g~-------~~gpL~GvPiavKDn~~~~G~~Tt~gS~~l~~~~p~~DA~vV~r 113 (475)
T COG0154 41 LNAFVAVDPEAALALAEAAAADARLAAGE-------PLGPLAGVPIAVKDNIDTAGLPTTAGSKALEDYVPPYDATVVER 113 (475)
T ss_pred CCEEEEeChhhcchHHHHHHHHHHHhcCC-------CCCCcCCceEEEeeccccCCCccCccChhhccCCCCcCcHHHHH
Confidence 69999999998866 9999999999884 25899999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCcee
Q psy15831 80 LRQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFG 159 (304)
Q Consensus 80 L~~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~g 159 (304)
|+++|||++|||||+||+|+..++|++||+|+||||+.|+|||||||||+|||++++++++|||||||||+||+||||||
T Consensus 114 L~~aGaviiGKTNm~Efa~g~~~~~s~~G~t~NP~~~~~~pGGSSgGSAaAVAag~~~~alGSDtGGSIR~PAa~cGvvG 193 (475)
T COG0154 114 LRAAGAVILGKTNMDEFAMGSSTENSAFGPTRNPWNLERVPGGSSGGSAAAVAAGLVPLALGSDTGGSIRIPAAFCGLVG 193 (475)
T ss_pred HHHCCCEEEeecCCchhhcCCCCCCCCCCCCCCCCCCCCCCCcCchHHHHHHHhCCcchhcccCCCCchhhhhhhhCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCcccccccc----C---CccccCCcEEEEECC
Q psy15831 160 HKPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRL----L---EPVIVQDIKVFYMED 232 (304)
Q Consensus 160 lkPT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~----~---~~~~~~~lrig~~~~ 232 (304)
||||+||||+.|++|.++ ++|++|||+|||+|+++++++|.+.|+...+... . .....+++|||++.+
T Consensus 194 lKPT~Grvsr~g~~~~a~-----sld~~GplartV~D~a~l~~v~~g~D~~d~~~~~~~~~~~~~~~~~~~~lrigv~~~ 268 (475)
T COG0154 194 LKPTYGRVSRYGVVPLAS-----SLDQIGPLARTVRDAALLLDVIAGPDPRDSPLPPPPPVPPALAGKDLKGLRIGVPKE 268 (475)
T ss_pred eCCCCCccCCCCCccccC-----CcCccCcccCCHHHHHHHHHHHcCCCCcccccccccCccchhhccCCCCcEEEEECc
Confidence 999999999999999998 8999999999999999999999996322111111 1 122567899999988
Q ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC-ChH--HHHHHHHHHHhcccCccccccc
Q psy15831 233 DGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI-DLE--DVFELVSMVLLKMNGINCPYQE 295 (304)
Q Consensus 233 ~g~~~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~-~~~--~~~~~~~~~~~~~~g~~~~~~~ 295 (304)
.. ...+.+++++++++++++.|+++ |++|+++++ .+. ..+..|. +..++++.+.++.
T Consensus 269 ~~---~~~~~~~~v~~~~~~a~~~l~~~-Ga~v~~v~lp~~~~~~~~~~~~--~~~~~~~~~~~~~ 328 (475)
T COG0154 269 LG---GGGPLDPDVRAAFEAAVKALEAA-GAEVVEVSLPLLSDDYALAAYY--LARFDGERYGLRA 328 (475)
T ss_pred cc---ccCCCcHHHHHHHHHHHHHHHHC-CCEEEeccCCchhhhhhhhHHH--HHHhhhhhhhhcc
Confidence 53 22467899999999999999995 999999987 233 3333442 4555666666553
No 2
>PF01425 Amidase: Amidase; InterPro: IPR000120 Amidase signature (AS) enzymes are a large group of hydrolytic enzymes that contain a conserved stretch of approximately 130 amino acids known as the AS sequence. They are widespread, being found in both prokaryotes and eukaryotes. AS enzymes catalyse the hydrolysis of amide bonds (CO-NH2), although the family has diverged widely with regard to substrate specificity and function. Nonetheless, these enzymes maintain a core alpha/beta/alpha structure, where the topologies of the N- and C-terminal halves are similar. AS enzymes characteristically have a highly conserved C-terminal region rich in serine and glycine residues, but devoid of aspartic acid and histidine residues, therefore they differ from classical serine hydrolases. These enzymes posses a unique, highly conserved Ser-Ser-Lys catalytic triad used for amide hydrolysis, although the catalytic mechanism for acyl-enzyme intermediate formation can differ between enzymes []. Examples of AS enzymes include: Peptide amidase (Pam) [], which catalyses the hydrolysis of the C-terminal amide bond of peptides. Fatty acid amide hydrolases [], which hydrolyse fatty acid amid substrates (e.g. cannabinoid anandamide and sleep-inducing oleamide), thereby controlling the level and duration of signalling induced by this diverse class of lipid transmitters. Malonamidase E2 [], which catalyses the hydrolysis of malonamate into malonate and ammonia, and which is involved in the transport of fixed nitrogen from bacteroids to plant cells in symbiotic nitrogen metabolism. Subunit A of Glu-tRNA(Gln) amidotransferase [],a heterotrimeric enzyme that catalyses the formation of Gln-tRNA(Gln) by the transamidation of misacylated Glu-tRNA(Gln) via amidolysis of glutamine. ; GO: 0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor; PDB: 1OCL_B 1OBK_A 1OBL_B 1OBJ_A 1OCM_B 1OCH_A 1OCK_B 1OBI_A 1O9Q_A 1O9N_B ....
Probab=100.00 E-value=9.9e-72 Score=537.63 Aligned_cols=261 Identities=37% Similarity=0.555 Sum_probs=218.6
Q ss_pred eeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCCCcchHHHHHHH
Q psy15831 2 LNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLLR 81 (304)
Q Consensus 2 lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L~ 81 (304)
+||+++.++++|+++|+++|+++++++ .++||+||||+|||+|+++|++||+||..+.++++++|+++|++|+
T Consensus 17 ~na~~~~~~~~a~~~A~~~d~~~~~~~-------~~~pL~Gip~~vKD~~~~~g~~tt~G~~~~~~~~~~~~a~~v~~L~ 89 (441)
T PF01425_consen 17 LNAFVEVDFDEALAQARELDARRARGK-------PRGPLHGIPISVKDNIDVAGLPTTAGSPALADNPPTEDAPVVQRLR 89 (441)
T ss_dssp H--EEEEEHHHHHHHHHHHHHHHHTTS-------SSSTTTT-EEEEETTBSBTTSBB-TTSGGGTTBBBSSS-HHHHHHH
T ss_pred cCEEEEECcHHHHHHHHHHHHHHhhcC-------CCCCCCCCceeccccccccccccccccccccCcCcccccchhhhee
Confidence 799999999999999999999998775 3699999999999999999999999999999999999999999999
Q ss_pred HcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCceeec
Q psy15831 82 QAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGHK 161 (304)
Q Consensus 82 ~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~glk 161 (304)
++|||++||||||||+++.++.|+.||+|+||||+.++|||||||||++||+|++++++|||+|||||+||+||||||||
T Consensus 90 ~aGai~~gkt~~~e~~~~~~~~~~~~g~~~Np~~~~~~~GGSS~Gsaaavaag~~~~a~GtDtgGSiR~PAa~~Gv~Glk 169 (441)
T PF01425_consen 90 AAGAIIIGKTNMPEFAMGPTTSNPLYGRTRNPWNPSRTPGGSSGGSAAAVAAGFVPLAIGTDTGGSIRIPAAFCGVVGLK 169 (441)
T ss_dssp HTT-EEEEEE--SGGGCSSSSTTTTTEE-EBTTBTTBE--SSSHHHHHHHHTTSSSEEEEEESSSTTHHHHHHHTSEEEE
T ss_pred cccccceeeecccceeccccccccccccccCcccccccccccccccccccceecccccccccccccccCchhccccceec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccC-----------CccccCCcEEEEE
Q psy15831 162 PSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLL-----------EPVIVQDIKVFYM 230 (304)
Q Consensus 162 PT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~-----------~~~~~~~lrig~~ 230 (304)
||+|+||+.|++|.++ ++|++|||+|||+|+++++++|.+.++ .++.+.. .....+++||||+
T Consensus 170 PT~G~vs~~G~~~~~~-----~~d~~GpmaRsv~Dl~~~l~vl~g~~~-~d~~~~~~~~~~~~~~~~~~~~~~~lrIGv~ 243 (441)
T PF01425_consen 170 PTRGRVSRDGVFPLSP-----SFDTVGPMARSVEDLALLLDVLAGPDP-WDPDSLPVPPPPPDFDAPLPKSLKGLRIGVP 243 (441)
T ss_dssp -STTSS--TTB-CSST-----TT-EEEEEESSHHHHHHHHHHHBSCBT-TBTTSCSTT--SS-CSTTTTSTTTT-EEEEE
T ss_pred cccccccccccccccc-----cccccccccCcHHHHHHHHHHhcCCCc-cCCCccccccccccccccccccccCcccccc
Confidence 9999999999999988 999999999999999999999999632 2221111 1235688999999
Q ss_pred CCCCCCcCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC-ChHHHHHHH
Q psy15831 231 EDDGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI-DLEDVFELV 279 (304)
Q Consensus 231 ~~~g~~~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~-~~~~~~~~~ 279 (304)
.+++ .+...+++++++++++++.|++ +|++|+++++ .+.+.+..|
T Consensus 244 ~~~~---~~~~~~~~v~~a~~~a~~~L~~-~G~~vv~~~~p~~~~~~~~~ 289 (441)
T PF01425_consen 244 RDDG---QWVPVDPEVRRAFEEAAEALEA-AGAEVVEVDLPDLDEAMDAY 289 (441)
T ss_dssp GGGG----SSTSSHHHHHHHHHHHHHHHH-TT-EEEEE--TTGGHHHHHH
T ss_pred cccc---ccccccHHHHHHHHHHHHhhcc-cccccccccCchHHHHHHHH
Confidence 8742 1468999999999999999999 4999999998 777776655
No 3
>PRK07487 amidase; Provisional
Probab=100.00 E-value=4.8e-70 Score=535.87 Aligned_cols=265 Identities=35% Similarity=0.446 Sum_probs=232.3
Q ss_pred eeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCCCcchHHHHHHH
Q psy15831 2 LNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLLR 81 (304)
Q Consensus 2 lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L~ 81 (304)
+||+++.++|+|+++|+++|+++++++ ..+||+||||+|||+|+++|++||+||..+.++++.+|+++|++|+
T Consensus 42 lna~~~~~~e~al~~A~~~d~~~~~g~-------~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~da~vV~rLr 114 (469)
T PRK07487 42 INAVVDHRPEEALAQADAVDAARARGD-------DPGPLAGVPVTVKVNVDQAGFATTNGVRLQKDLIAPADSPVVDNLR 114 (469)
T ss_pred ccEEEEeCHHHHHHHHHHhHHHHhcCC-------CCCCcCCCEEEEecccccCCCccCcchHHhcCCCCCCchHHHHHHH
Confidence 799999999999999999999888875 2589999999999999999999999999999999999999999999
Q ss_pred HcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCceeec
Q psy15831 82 QAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGHK 161 (304)
Q Consensus 82 ~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~glk 161 (304)
++|||++||||||||+++.++.|++||+|+||||+.|++||||||||++||+|++++++|||+|||||+||+|||+||||
T Consensus 115 ~aGAii~GKTn~~Efa~~~~~~n~~~G~t~NP~d~~~~~GGSSgGsAaAVAaG~~~~alGtDtgGSIRiPAa~cGvvGlK 194 (469)
T PRK07487 115 KAGAVIIGRTNTPAFSYRWFTDNPLHGRTLNPWDPSLTPGGSSGGAAAAVAAGIGAIAHGTDIGGSIRYPAYACGVHGLR 194 (469)
T ss_pred HCCCEEEEecChhhhhcCCCCCCCCCCCCCCCCCCCCCCCcchHHHHHHHHcCCCceeeecCCCCccccchhhcCceeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccCCc--cccCCcEEEEECCCCCCcCC
Q psy15831 162 PSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEP--VIVQDIKVFYMEDDGSCTLT 239 (304)
Q Consensus 162 PT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~~~--~~~~~lrig~~~~~g~~~~~ 239 (304)
||+|+||+.|+++........+++++|||+|||+|+++++++|.+. +..++.....+ ...+++|||++.+++ .
T Consensus 195 PT~G~is~~g~~~~~~~l~~~~~~~~Gplarsv~D~a~~~~~l~g~-d~~d~~~~~~~~~~~~~~lrig~~~~~~----~ 269 (469)
T PRK07487 195 PTLGRVPAYNASSPERPIGAQLMSVQGPLARTVADLRLALAAMAAP-DPRDPWWVPAPLEGPPRPKRVALCVRPD----G 269 (469)
T ss_pred CCCCccCCCCCCccccccccccccccCCeeCCHHHHHHHHHHHhCC-CCCCCccCCCCccCCCCCcEEEEECCCC----C
Confidence 9999999999764211011227889999999999999999999985 33333322111 235789999997642 3
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCcEEEEe-cC-ChHHHHHHH
Q psy15831 240 DGVDLDIKEGIRKAVHHLEYKQGIKAQKV-NI-DLEDVFELV 279 (304)
Q Consensus 240 ~~~~~~v~~a~~~a~~~L~~~lG~~v~~~-~~-~~~~~~~~~ 279 (304)
..++++++++++++++.|++ +||+|+++ ++ .+.+.+..|
T Consensus 270 ~~~~~~v~~a~~~a~~~L~~-~G~~v~~~~~~~~~~~~~~~~ 310 (469)
T PRK07487 270 LDVDPEVEAALRDAARRLED-AGWTVEEVDDTPPLREAAELQ 310 (469)
T ss_pred CCCCHHHHHHHHHHHHHHHH-CCCEEEecCCCCchHHHHHHH
Confidence 46899999999999999999 59999998 66 666655544
No 4
>PRK00012 gatA aspartyl/glutamyl-tRNA amidotransferase subunit A; Reviewed
Probab=100.00 E-value=4.9e-70 Score=534.73 Aligned_cols=260 Identities=33% Similarity=0.468 Sum_probs=232.6
Q ss_pred CeeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCCCcchHHHHHH
Q psy15831 1 MLNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLL 80 (304)
Q Consensus 1 ~lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L 80 (304)
.+||+++.++|+|+++|+++|+++++++ .+|||||||+|||+|+++|++||+||..+.++++.+|+++|++|
T Consensus 25 ~lna~~~~~~~~al~~A~~~d~~~~~g~--------~gpL~GvPv~vKD~~~v~G~~tt~Gs~~~~~~~~~~da~vV~~L 96 (459)
T PRK00012 25 KLNAFITVTEEEALAQAKAADAKLAAGE--------AGPLAGIPIAIKDNICTKGIRTTCASKILENYVPPYDATVVEKL 96 (459)
T ss_pred cCCeEEEeCHHHHHHHHHHHHHHHhcCC--------CCccCCeEEEEecccccCCCccCccCHhhccCCCCcchHHHHHH
Confidence 3799999999999999999999887763 48999999999999999999999999999999999999999999
Q ss_pred HHcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCceee
Q psy15831 81 RQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGH 160 (304)
Q Consensus 81 ~~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~gl 160 (304)
+++|||++||||||||+++..+.|++||+|+||||+.|++||||||||++||+|++++++|||+|||||+||+|||+|||
T Consensus 97 r~aGAiilGkTn~~E~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSiRiPAa~cGvvG~ 176 (459)
T PRK00012 97 KAAGAVILGKTNMDEFAMGSSTENSAFGPTKNPWDLERVPGGSSGGSAAAVAAGLAPAALGSDTGGSIRQPAAFCGVVGL 176 (459)
T ss_pred HHCCCEEEeeccchhhhcCCCCCCCCCCCcCCCCCCCCCCCCCcHHHHHHHHcCCCceEEeeCCCCccchhHHHcCceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccC-------C--ccccCCcEEEEEC
Q psy15831 161 KPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLL-------E--PVIVQDIKVFYME 231 (304)
Q Consensus 161 kPT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~-------~--~~~~~~lrig~~~ 231 (304)
|||+|++|+.|++|.++ ++|++|||+|+|+|+++++++|.+. +..++.+.. . ....+++|||++.
T Consensus 177 KPT~G~vp~~G~~~~~~-----~~d~~Gp~arsv~D~a~~~~~l~g~-d~~d~~~~~~~~~~~~~~~~~~~~~lrig~~~ 250 (459)
T PRK00012 177 KPTYGRVSRYGLIAFAS-----SLDQIGPFARTVEDAALLLNAIAGH-DPKDSTSADVPVPDYTAALGKDIKGLKIGVPK 250 (459)
T ss_pred cCCCCcccCCCCcCccc-----CCCcccCccCCHHHHHHHHHHHhCC-CCCCcccccCCCCchhhhhcccccccEEEEEc
Confidence 99999999999999987 8999999999999999999999986 222222211 0 0135789999987
Q ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC-ChHHHHHHH
Q psy15831 232 DDGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI-DLEDVFELV 279 (304)
Q Consensus 232 ~~g~~~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~-~~~~~~~~~ 279 (304)
+. +...++|+++++++++++.|++ +|++|+++++ .+.+....|
T Consensus 251 ~~----~~~~~~~~v~~a~~~a~~~L~~-~G~~v~~~~~~~~~~~~~~~ 294 (459)
T PRK00012 251 EY----FGEGLDPEVKEAVEAAIKKLED-LGAEIVEVSLPHTKYALPAY 294 (459)
T ss_pred cc----ccccCCHHHHHHHHHHHHHHHH-CCCEEEEeCCCchHHHHHHH
Confidence 63 2356799999999999999999 5999999887 554444433
No 5
>PRK05962 amidase; Validated
Probab=100.00 E-value=5.6e-70 Score=529.27 Aligned_cols=247 Identities=28% Similarity=0.359 Sum_probs=227.4
Q ss_pred eeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCC-CcchHHHHHH
Q psy15831 2 LNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIA-TDDAETVRLL 80 (304)
Q Consensus 2 lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~-~~da~~V~~L 80 (304)
+||+++.++|+|+++|+++|+++++++ ..+||+||||+|||+|+++|++||+||..+.++++ .+|+++|++|
T Consensus 15 lna~~~~~~~~al~~A~~~d~~~~~g~-------~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~~dA~vV~rL 87 (424)
T PRK05962 15 EHVFSKLYAERARAEADAADARRRAGR-------SLGPLDGRIVSIKDLFDVAGEPTLAGSVIRRDAPPAGADALIVQRL 87 (424)
T ss_pred ccEEEEECHHHHHHHHHHHHHHHHcCC-------CCCCCCCCEEEEEeeeecCCcccCCCChhhhcCCCCcCChHHHHHH
Confidence 799999999999999999999988775 25999999999999999999999999999999888 6899999999
Q ss_pred HHcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCceee
Q psy15831 81 RQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGH 160 (304)
Q Consensus 81 ~~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~gl 160 (304)
+++|||++||||||||+++.++.|++||+|+||||+.|++||||||||++||+|++++++|||+|||||+||+|||+|||
T Consensus 88 ~~aGAiilGKTn~~E~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSiRiPAa~cGv~Gl 167 (424)
T PRK05962 88 RNAGAVIIGKTHMTEFAFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAALNGLVGF 167 (424)
T ss_pred HHCCCEEEEecCchHHhcCCCCCCCCCCCCCCCCCCCCCCCcCcHHHHHHHHcCCCceEEeeCCCCcchhhhHhhCceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccCCccccCCcEEEEECCCCCCcCCC
Q psy15831 161 KPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEPVIVQDIKVFYMEDDGSCTLTD 240 (304)
Q Consensus 161 kPT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~~~~~~~~lrig~~~~~g~~~~~~ 240 (304)
|||+|+||+.|++|.++ ++|++|||+|+|+|+++++++|.+.| ..+. . ....+++|||++.+. +..
T Consensus 168 KPT~G~v~~~G~~~~~~-----s~d~~Gp~arsv~D~~~~~~vl~g~~--~~~~--~-~~~~~~lrig~~~~~----~~~ 233 (424)
T PRK05962 168 KPTARRIPLEGAFPLSP-----SLDSIGPLARTVADCAAADAVMAGEK--PIPL--E-VLPVAGLRIGLPKGY----LLA 233 (424)
T ss_pred ecCCCceeCCCcccCcc-----ccCccccccCCHHHHHHHHHHHcCCC--CCcc--c-ccCcCCcEEEEEccc----ccc
Confidence 99999999999999887 99999999999999999999999852 2111 1 123578999998764 245
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCcEEEEecC
Q psy15831 241 GVDLDIKEGIRKAVHHLEYKQGIKAQKVNI 270 (304)
Q Consensus 241 ~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~ 270 (304)
.++|+++++++++++.|+++ |++|+++++
T Consensus 234 ~~~~~v~~a~~~a~~~L~~~-G~~v~~~~~ 262 (424)
T PRK05962 234 DMEPDVAAAFEASLAALEKA-GARIADLAI 262 (424)
T ss_pred cCCHHHHHHHHHHHHHHHHC-CCEEEEecc
Confidence 68999999999999999995 999999876
No 6
>PRK06170 amidase; Provisional
Probab=100.00 E-value=2.2e-69 Score=534.02 Aligned_cols=267 Identities=35% Similarity=0.536 Sum_probs=231.2
Q ss_pred CeeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCCCcchHHHHHH
Q psy15831 1 MLNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLL 80 (304)
Q Consensus 1 ~lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L 80 (304)
.+||+++.++|+|+++|+++|++++++. .+||+||||+|||+|+++|++||+||+.+.++++.+|+++|++|
T Consensus 45 ~lna~~~~~~e~al~~A~~~d~~~~~g~--------~gpL~GvPv~VKD~~~v~G~~tt~Gs~~~~~~~~~~da~vV~rL 116 (490)
T PRK06170 45 KINAIVVRDFDRARAAARAADAARARGE--------RGPLLGIPVTVKESFNVAGLPTTWGFPDLRDYVPAEDAVAVARL 116 (490)
T ss_pred CcCEEEECCHHHHHHHHHHHHHHHhcCC--------CCCcCCceEEEecccccCCcccCCCChhhcCCCCCccHHHHHHH
Confidence 3799999999999999999999888763 48999999999999999999999999999999999999999999
Q ss_pred HHcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCceee
Q psy15831 81 RQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGH 160 (304)
Q Consensus 81 ~~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~gl 160 (304)
+++|||++||||||||+++.++.|++||+|+||||+.|++||||||||++||+|++++++|||+|||||+||+|||||||
T Consensus 117 r~aGAii~GKTn~~E~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaAVAaG~~~~alGtDtgGSiRiPAa~cGvvG~ 196 (490)
T PRK06170 117 KAAGAVILGKTNVPLGLQDWQSYNEIYGTTNNPWDLARTPGGSSGGSAAALAAGFGALSIGSDIGGSLRVPAHYCGVYAH 196 (490)
T ss_pred HHCCCEEEEecCChhhccCCCccCCCCCCCCCCCCCCCCCCCChHHHHHHHHcCCCceeeecCCCCccccChHHhCceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCC--ccCCCCceeeccccCCcchHHHHHHHHcCCCcccc--cccc--C--CccccCCcEEEEECC
Q psy15831 161 KPSPGFVSNVGHMPSSE--DKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAK--SLRL--L--EPVIVQDIKVFYMED 232 (304)
Q Consensus 161 kPT~g~vs~~G~~p~~~--~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~--~~~~--~--~~~~~~~lrig~~~~ 232 (304)
|||+|+||+.|++|.+. .....++|++|||+|+|+|+++++++|.+.|+... +.+. . .....+++|||++.+
T Consensus 197 KPT~Grv~~~G~~~~~~~~~~~~~~~d~~Gp~arsv~D~a~~l~~l~g~d~~d~~~~~~~~~~~~~~~~~~~lrig~~~~ 276 (490)
T PRK06170 197 KPTLGLVPLRGHIPPPAPALPGQADLAVAGPMARSARDLALLLDVMAGPDPLDGGVAYRLALPPARHGRLKDFRVLVLDE 276 (490)
T ss_pred cCCCCcCcCCCcCCccccccccccccccccCccCCHHHHHHHHHHHhCCCccccccccccCCCcccccccCCCEEEEECC
Confidence 99999999999988210 00112689999999999999999999999632211 1111 1 011357799999976
Q ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEec--C-ChHHHHHHHH
Q psy15831 233 DGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVN--I-DLEDVFELVS 280 (304)
Q Consensus 233 ~g~~~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~--~-~~~~~~~~~~ 280 (304)
++ ...++++++++++++++.|++ +|++|++++ + ++.+.+..|.
T Consensus 277 ~~----~~~~~~~v~~a~~~a~~~L~~-~G~~v~~~~~~~~~~~~~~~~~~ 322 (490)
T PRK06170 277 HP----LLPTDAAVRAAIERLAAALAD-AGARVVRHSPLLPDLAESARLYM 322 (490)
T ss_pred cC----CCCCCHHHHHHHHHHHHHHHH-CCCEEEEcCCCCCchHHHHHHHH
Confidence 42 356899999999999999999 499999986 3 5555555553
No 7
>PRK06169 putative amidase; Provisional
Probab=100.00 E-value=4.8e-69 Score=528.51 Aligned_cols=251 Identities=31% Similarity=0.376 Sum_probs=225.9
Q ss_pred CeeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCC-CcchHHHHH
Q psy15831 1 MLNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIA-TDDAETVRL 79 (304)
Q Consensus 1 ~lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~-~~da~~V~~ 79 (304)
.+||+++.++|+|+++|+++|+++++++ ..+||+||||+|||+|+++|++||+||..+.+..+ .+|+++|++
T Consensus 40 ~lna~~~~~~~~al~~A~~~d~~~~~g~-------~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~p~~~da~vV~~ 112 (466)
T PRK06169 40 AVNAFCLVDAEGALAAARASEERWRRGE-------PCGLLDGVPVSIKDIFLTRGWPTLRGSRAIDADGPWDVDAPAVAR 112 (466)
T ss_pred CCCEEEEeCHHHHHHHHHHHHHHHhcCC-------CCCCcCCceEEEecccccCCcccCccChhhccCCCCCCCHHHHHH
Confidence 3799999999999999999999988875 25899999999999999999999999999986665 799999999
Q ss_pred HHHcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCcee
Q psy15831 80 LRQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFG 159 (304)
Q Consensus 80 L~~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~g 159 (304)
|+++|||++||||||||+++..+.|++||+|+||||+.|++||||||||++||+|++++++|||+|||||+||+|||+||
T Consensus 113 Lr~aGAii~GKTn~~E~a~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSiRiPAa~cGv~G 192 (466)
T PRK06169 113 LREAGAVLLGKTTTPEFGWKGVTDSPLYGITRNPWDTRLTAGGSSGGAAAAVALGMGPLSVGTDGGGSVRIPASFCGTFG 192 (466)
T ss_pred HHHCCCEEEEecCchHhhcCCCCCCCCCCCCCCCCCCCCCCCcCcHHHHHHHHcCCCceeeecCCCCcchhchHhhCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccCC---------ccccCCcEEEEE
Q psy15831 160 HKPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLE---------PVIVQDIKVFYM 230 (304)
Q Consensus 160 lkPT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~~---------~~~~~~lrig~~ 230 (304)
||||+|++|+.|+.+.+ ++|++|||+|+|+|+++++++|.+. +..++..... ....+++||||+
T Consensus 193 ~KPT~G~vs~~g~~~~~------~~d~~Gp~arsv~D~~~~~~~l~g~-~~~d~~~~~~~~~~~~~~~~~~~~~lrig~~ 265 (466)
T PRK06169 193 FKPTFGRVPLYPASPFG------TLAHVGPMTRTVADAALLLDVIARP-DARDWSALPPPTTSFLDALDRDVRGLRIAYS 265 (466)
T ss_pred ecCCCCccCCCCCCCCc------cccccCCeeCCHHHHHHHHHHhcCC-CCCCCcccCCCCcchhhhhccCCCCCEEEEE
Confidence 99999999999987753 7899999999999999999999985 2223222211 113578999998
Q ss_pred CCCCCCcCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC
Q psy15831 231 EDDGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI 270 (304)
Q Consensus 231 ~~~g~~~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~ 270 (304)
.+++ +...+++++++++++++.|++ +|++|+++++
T Consensus 266 ~~~~----~~~~~~~v~~a~~~a~~~L~~-~G~~v~~~~~ 300 (466)
T PRK06169 266 PTLG----YVDVDPEVAALVAQAVQRLAA-LGARVEEVDP 300 (466)
T ss_pred CCcC----CCCCCHHHHHHHHHHHHHHHH-cCCEEEEeCC
Confidence 7643 456899999999999999999 5999999876
No 8
>TIGR00132 gatA glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit. This orthology group is more narrowly defined here than in Proc Natl Acad Aci USA 94, 11819-11826 (1997). In particular, a Rhodococcus homolog found in association with nitrile hydratase genes and described as an enantiomer-selective amidase active on several 2-aryl propionamides, is excluded here. It is likely, however, that the amidase subunit GatA is not exclusively a part of the Glu-tRNA(Gln) amidotransferase heterotrimer and restricted to that function in all species.
Probab=100.00 E-value=3.8e-69 Score=528.61 Aligned_cols=254 Identities=32% Similarity=0.483 Sum_probs=227.9
Q ss_pred CeeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCCCcchHHHHHH
Q psy15831 1 MLNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLL 80 (304)
Q Consensus 1 ~lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L 80 (304)
.+||+++.++|+|+++|+++|++++ +|||||||+|||+|+++|++||+||..++++++.+|+++|++|
T Consensus 29 ~~na~~~~~~~~al~~A~~~d~~~~------------gpL~GvPv~vKD~~~v~G~~tt~Gs~~~~~~~~~~dA~vV~~L 96 (460)
T TIGR00132 29 KINAFLEVTVEKALKQAKKLDKAIL------------TPLAGIPIAVKDNISTKGIVTTCASKILENYIPPYDATVIERL 96 (460)
T ss_pred cCCeEEEcCHHHHHHHHHHHHHhcc------------CCcCCcEEEEecccccCCcccCcCChhhccCCCCCchHHHHHH
Confidence 3799999999999999999998632 6999999999999999999999999999999999999999999
Q ss_pred HHcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCceee
Q psy15831 81 RQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGH 160 (304)
Q Consensus 81 ~~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~gl 160 (304)
+++|||++||||||||+++.++.|+.||+|+||||+.|++||||||||++||+|++++++|||+|||||+||+|||+|||
T Consensus 97 ~~aGAii~GKTn~~E~a~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSIRiPAa~cGv~G~ 176 (460)
T TIGR00132 97 KQAGALIIGKTNMDEFAMGSSTETSAFGPTKNPWNLDRVPGGSSGGSAAAVAADLAPFSLGSDTGGSIRQPASFCGVVGF 176 (460)
T ss_pred HHCCCEEEEEechhHHhcCCCCCCCCCCCCCCCCCCCCCCCcCcHHHHHHHHcCCCCeEeecCCCCcchhhhHhcCceeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccCCc---------cccCCcEEEEEC
Q psy15831 161 KPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEP---------VIVQDIKVFYME 231 (304)
Q Consensus 161 kPT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~~~---------~~~~~lrig~~~ 231 (304)
|||+|+||+.|++|.++ ++|++|||+|+|+|+++++++|.+. +..++.....+ ...+++|||++.
T Consensus 177 KPT~G~vs~~G~~~~~~-----~~d~~Gp~arsv~D~a~~~~~l~g~-~~~d~~~~~~~~~~~~~~~~~~~~~lrig~~~ 250 (460)
T TIGR00132 177 KPTYGRVSRYGLVAYAS-----SLDQIGPFARTVEDIALLLDVISGH-DKRDSTSAKVPDPEFFEELKKDLKGLKVGVVK 250 (460)
T ss_pred CCCCCcCCCCCCcCccc-----CCCcccCeeCCHHHHHHHHHHHcCC-CCCCCcccCCCccchhhhhhcccCCCEEEEEC
Confidence 99999999999999988 9999999999999999999999986 32332221110 135789999987
Q ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC-ChHHHHHH
Q psy15831 232 DDGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI-DLEDVFEL 278 (304)
Q Consensus 232 ~~g~~~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~-~~~~~~~~ 278 (304)
+.. ...+++++++++++++.|++ +|++|+++++ .+.+....
T Consensus 251 ~~~-----~~~~~~v~~a~~~a~~~L~~-~G~~v~~~~~p~~~~~~~~ 292 (460)
T TIGR00132 251 EFS-----EEMDKEVQEKFENALEVLEE-LGAEIVEVSFPHVKYALPI 292 (460)
T ss_pred ccc-----ccCCHHHHHHHHHHHHHHHH-CCCEEEEeCCCcHHHHHHH
Confidence 632 24799999999999999999 5999999987 55544443
No 9
>PRK07056 amidase; Provisional
Probab=100.00 E-value=4.4e-69 Score=527.09 Aligned_cols=255 Identities=29% Similarity=0.419 Sum_probs=230.9
Q ss_pred eeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCC-CcchHHHHHH
Q psy15831 2 LNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIA-TDDAETVRLL 80 (304)
Q Consensus 2 lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~-~~da~~V~~L 80 (304)
+||+++.++|+|+++|+++|+++++++ ..+||+||||+|||+|+++|++||+||..+.++++ .+|+++|++|
T Consensus 41 lna~~~~~~~~al~~A~~~d~~~~~g~-------~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~~dA~vV~rL 113 (454)
T PRK07056 41 ARVFTHVDADAARAAADAADALRAAGA-------APSPLAGIPVSVKDLFDVAGQVTRAGSRVLADAPPAAADAPAVARL 113 (454)
T ss_pred ccEEEEeCHHHHHHHHHHHHHHHhCCC-------CCCCcCCCeEEEEeeeccCCCccCCCChhhccCCCCCCCHHHHHHH
Confidence 799999999999999999999888775 25899999999999999999999999999999888 6899999999
Q ss_pred HHcCCeEEEEcCcCccccccCCCCCCCCCCCCCC----CCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccC
Q psy15831 81 RQAGAIILCVTNTPELCMNWETFNKATGTTNNPY----DTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTG 156 (304)
Q Consensus 81 ~~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~----~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~G 156 (304)
+++|||++||||||||+++.++.|++||+|+||| |+.|+|||||||||++||+|++++++|||+|||||+||+|||
T Consensus 114 r~aGAii~GKTn~~E~~~~~~~~n~~~G~t~NP~~~~~~~~~~~GGSSgGsAaaVAag~~~~alGtDtgGSIRiPAa~cG 193 (454)
T PRK07056 114 RRAGAVLIGRTNMTEFAFSGLGLNPHYGTPRNPWRRDVGDGRIPGGSSSGAAVSVADGMAAAALGTDTGGSIRIPAALCG 193 (454)
T ss_pred HHCCCEEEEeccchhHhhCCCCCCCCCCCCCCCCCCCCCCCcCCCCcchHHHHHHHcCCCceEEeeCCCCccccchHhhC
Confidence 9999999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred ceeeccCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccCCccccCCcEEEEECCCCCC
Q psy15831 157 VFGHKPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEPVIVQDIKVFYMEDDGSC 236 (304)
Q Consensus 157 v~glkPT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~~~~~~~~lrig~~~~~g~~ 236 (304)
+||||||+|+||+.|++|.++ ++|++|||+|+|+|+++++++|.+. +..++.++ ..+++||||+.+.
T Consensus 194 v~GlKPT~G~vs~~G~~~~~~-----~~d~~Gp~arsv~D~a~~~~vl~g~-d~~d~~~~----~~~~lrig~~~~~--- 260 (454)
T PRK07056 194 LTGFKPTARRVPLQGAVPLST-----TLDSIGPLARSVACCALVDAVLAGE-EPVVPAAR----PLEGLRLAVPTTV--- 260 (454)
T ss_pred ceeeccCCCccCCCCcccCcc-----ccCcccCccCCHHHHHHHHHHhcCC-CCCCcccc----cccCcEEEEcchh---
Confidence 999999999999999999887 9999999999999999999999985 33333221 3577999998763
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC-ChHHHHHH
Q psy15831 237 TLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI-DLEDVFEL 278 (304)
Q Consensus 237 ~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~-~~~~~~~~ 278 (304)
+...++|+++++++++++.|++ +|++|+++++ .+.+..++
T Consensus 261 -~~~~~~~~v~~~~~~a~~~L~~-~G~~v~~~~~~~~~~~~~~ 301 (454)
T PRK07056 261 -VLDGLDATVAAAFERALKRLSA-AGAIIEEIAFPELAELAEI 301 (454)
T ss_pred -hccCCCHHHHHHHHHHHHHHHH-CCCEEEEecCcchHHHHHH
Confidence 2345899999999999999999 4999999886 54444433
No 10
>PRK06102 hypothetical protein; Provisional
Probab=100.00 E-value=5.2e-69 Score=526.33 Aligned_cols=254 Identities=25% Similarity=0.352 Sum_probs=229.0
Q ss_pred eeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCC-CcchHHHHHH
Q psy15831 2 LNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIA-TDDAETVRLL 80 (304)
Q Consensus 2 lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~-~~da~~V~~L 80 (304)
+||++...+|+|+++|+++|+++++++ .++||+||||+|||+|+++|++||+||..+.++++ .+|+++|++|
T Consensus 39 ~na~~~~~~~~al~~A~~~d~~~~~g~-------~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~~dA~vV~rL 111 (452)
T PRK06102 39 QAVFISLTEERAMREAEASSARWRAGR-------SLGLLDGIPIAWKDLFDVAGSVTTAGSVVLANAAPASRDAAVVALL 111 (452)
T ss_pred CCEEEEeCHHHHHHHHHHHHHHHHCCC-------CCCCcCCCeEEEEeccccCCCccCcCChhhccCCCCCCCHHHHHHH
Confidence 699999999999999999999988775 25899999999999999999999999999998876 7999999999
Q ss_pred HHcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCC--CCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCce
Q psy15831 81 RQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDT--RRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVF 158 (304)
Q Consensus 81 ~~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~--~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~ 158 (304)
+++|||++||||||||+++..+.|++||+|+||||+ .|++||||||||++||+|++++++|||+|||||+||+|||+|
T Consensus 112 ~~aGAii~GKTn~~E~a~~~~~~n~~~G~t~NP~~~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSiRiPAa~cGv~ 191 (452)
T PRK06102 112 ARAGMVSIGRTNMSEFAFSGLGLNPHYGTPVNPRSTDVPRIPGGSSSGSAVAVAAGLVPVAMGTDTGGSVRIPAAFNGLV 191 (452)
T ss_pred HHCCCEEEEeechHhHhcCCCCCCCCCCCCCCCCCCCCCcCCCCCcHHHHHHHHcCCCceEEecCCCCcchhhhHHhCce
Confidence 999999999999999999999999999999999986 799999999999999999999999999999999999999999
Q ss_pred eeccCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccCCccccCCcEEEEECCCCCCcC
Q psy15831 159 GHKPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEPVIVQDIKVFYMEDDGSCTL 238 (304)
Q Consensus 159 glkPT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~~~~~~~~lrig~~~~~g~~~~ 238 (304)
|||||+|+||+.|++|.++ ++|++|||+|+|+|+++++++|.+. +..+.. +..++++||++..+. +
T Consensus 192 G~KPT~G~v~~~G~~~~~~-----s~d~~Gp~arsv~D~a~~~~~l~g~-~~~~~~----~~~~~~~ri~~~~~~----~ 257 (452)
T PRK06102 192 GYKATRGRYSMDGVFPLAK-----SLDSLGPLCRSVRDAVWIDAAMRGL-TAPDVV----RRPLAGLRLVVPETV----V 257 (452)
T ss_pred eEecCCCcccCCCCccccc-----ccCcccCccCCHHHHHHHHHHHcCC-CCcccc----ccCCCCCEEEEecch----h
Confidence 9999999999999999987 9999999999999999999999985 221111 123567899997652 2
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC-ChHHHHH
Q psy15831 239 TDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI-DLEDVFE 277 (304)
Q Consensus 239 ~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~-~~~~~~~ 277 (304)
...++|+++++++++++.|+++ |++|+++++ .+.+.+.
T Consensus 258 ~~~~~~~v~~~~~~a~~~L~~~-G~~v~~~~~~~~~~~~~ 296 (452)
T PRK06102 258 FDDAEPGVRAAFEAAVERLQAA-GALVERQAFPAFQEILD 296 (452)
T ss_pred cccCCHHHHHHHHHHHHHHHhC-CCEEEecCCccHHHHHH
Confidence 3468999999999999999995 999999887 5555444
No 11
>PRK07488 indole acetimide hydrolase; Validated
Probab=100.00 E-value=9.2e-69 Score=527.28 Aligned_cols=248 Identities=32% Similarity=0.442 Sum_probs=228.0
Q ss_pred eeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCCCcchHHHHHHH
Q psy15831 2 LNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLLR 81 (304)
Q Consensus 2 lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L~ 81 (304)
+||+++..+|+|+++|+++|+++++++. .+ |+||||+|||+|+++|++||+||..+.++++.+|+++|++|+
T Consensus 44 lna~~~~~~~~al~~A~~~d~~~~~g~~-------~g-L~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~dA~vV~rLr 115 (472)
T PRK07488 44 LNAFTTVDAEGALAAARRIDAQRAAGAA-------LL-LAGVPIVIKDNINTAGMPTTAGTPALLGFVPATDAPVVQRLL 115 (472)
T ss_pred CCEEEEcCHHHHHHHHHHHHHHHhcCCC-------CC-cCceEEEEEcccccCCCccCcCChhhccCCCCCCHHHHHHHH
Confidence 7999999999999999999998877742 35 999999999999999999999999999999999999999999
Q ss_pred HcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCceeec
Q psy15831 82 QAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGHK 161 (304)
Q Consensus 82 ~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~glk 161 (304)
++|||++||||||||+++.++.|++||+|+||||+.++|||||||||++||+|++++++|||+|||||+||+|||+||||
T Consensus 116 ~aGAii~GKTn~~E~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSIRiPAa~cGvvG~K 195 (472)
T PRK07488 116 DAGAVPLGKANMHELAFGITSNNGAFGAVRNPYDPARIAGGSSGGTAAAVAARLAPAGLGTDTGGSVRIPAALCGVVGLR 195 (472)
T ss_pred HCCCeeeeccChhHHhcCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHcCCCceeeecCCCCCeecChHhhCceeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccCCccccCCcEEEEECCCCCCcCCCC
Q psy15831 162 PSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEPVIVQDIKVFYMEDDGSCTLTDG 241 (304)
Q Consensus 162 PT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~~~~~~~~lrig~~~~~g~~~~~~~ 241 (304)
||+|++|+.|++|.++ ++|++|||+|+|+|+++++++|.+.|+ .+ .+..++++|||++.++. +..
T Consensus 196 PT~G~vs~~G~~p~~~-----~~d~~Gp~arsv~D~a~~~~vl~g~d~-~~-----~~~~~~~lrig~~~~~~----~~~ 260 (472)
T PRK07488 196 PTVGRYSGDGVVPISH-----TRDTVGPIARSVADLALLDAVITGDAA-LP-----APVALAGLRLGVPAAPF----WDG 260 (472)
T ss_pred cCCCCCCCCCcccccc-----cCCcccCccCCHHHHHHHHHHhcCCCC-CC-----CCcCcCCCEEEEEcchh----ccC
Confidence 9999999999999887 999999999999999999999998522 11 11246789999987642 456
Q ss_pred CCHHHHHHHHHHHHHHHhcCCcEEEEecC-ChH
Q psy15831 242 VDLDIKEGIRKAVHHLEYKQGIKAQKVNI-DLE 273 (304)
Q Consensus 242 ~~~~v~~a~~~a~~~L~~~lG~~v~~~~~-~~~ 273 (304)
.+++++++++++++.|++ +|++|+++++ .+.
T Consensus 261 ~~~~v~~a~~~a~~~L~~-~G~~v~~~~~~~~~ 292 (472)
T PRK07488 261 LDPDVAAVAEAALAKLAA-AGVTFVELDLPGLH 292 (472)
T ss_pred CCHHHHHHHHHHHHHHHH-CCCEEEeeCCcCHH
Confidence 899999999999999999 5999999886 443
No 12
>PRK07042 amidase; Provisional
Probab=100.00 E-value=1.7e-68 Score=524.42 Aligned_cols=249 Identities=29% Similarity=0.390 Sum_probs=222.7
Q ss_pred CeeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCCCcchHHHHHH
Q psy15831 1 MLNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLL 80 (304)
Q Consensus 1 ~lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L 80 (304)
.+||+++.++|+|+++|+++|+++++++ ..+||+||||+|||+|+++|++||+||..+.++++.+|+++|++|
T Consensus 40 ~lna~~~~~~d~al~~A~~~d~~~~~g~-------~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~dA~vV~~L 112 (464)
T PRK07042 40 HLNALYAFDPEAARAAARASTARWAKGE-------PLGPLDGVPVTIKENIATRGVPVPLGTAATDLPPAAADAPPAARL 112 (464)
T ss_pred CccEEEEcCHHHHHHHHHHHHHHHHcCC-------CCCCcCCCEEEEEcccccCCcccCCCChhhcCCCCCcchHHHHHH
Confidence 3799999999999999999999988875 358999999999999999999999999999999999999999999
Q ss_pred HHcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCceee
Q psy15831 81 RQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGH 160 (304)
Q Consensus 81 ~~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~gl 160 (304)
+++|||++||||||||+++..+.|++||+|+||||+.|++||||||||++||+|++++++|||||||||+||+|||||||
T Consensus 113 r~aGAiilGKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSIRiPAa~cGvvG~ 192 (464)
T PRK07042 113 REAGAVILAKTTMPDYGMLSSGLSSFHGLTRNPWDLDQNPGGSSAGAGAAAAAGYGPLHLGTDIGGSVRLPAGWCGIVGL 192 (464)
T ss_pred HHCCCEEEEecCchHhhcCCCCCCCCCCCcCCCCCCCCCCCCChHHHHHHHHcCCCceeeecCCCCccccchHhhCceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccCC--------ccccCCcEEEEECC
Q psy15831 161 KPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLE--------PVIVQDIKVFYMED 232 (304)
Q Consensus 161 kPT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~~--------~~~~~~lrig~~~~ 232 (304)
|||+|+||+.|.+ +.|++|||+|+|+|+++++++|.++ +..++.+... ....+++||||+.+
T Consensus 193 KPT~Grv~~~g~~---------~~d~~Gp~arsv~D~a~~l~vl~g~-d~~d~~~~~~~~~~~~~~~~~~~~lrigv~~~ 262 (464)
T PRK07042 193 KPSLGRIPIDPPY---------TGRCAGPMTRTVDDAALLMSVLSRP-DARDGTSLPPQDIDWSDLDIDVRGLRIGLMLD 262 (464)
T ss_pred cCCCCccCCCCCc---------cccccCCccCCHHHHHHHHHHhcCC-CCCCccccCCCCcChhhhccCcCCCEEEEECc
Confidence 9999999987631 3479999999999999999999986 3233322211 01346799999876
Q ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC
Q psy15831 233 DGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI 270 (304)
Q Consensus 233 ~g~~~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~ 270 (304)
++ +...++|+++++++++++.|++ +|++|+++++
T Consensus 263 ~~---~~~~~~~~v~~a~~~a~~~L~~-~G~~v~~~~~ 296 (464)
T PRK07042 263 AG---CGLAVDPEVRAAVEAAARRFEA-AGAIVEPVPP 296 (464)
T ss_pred cc---CCCCCCHHHHHHHHHHHHHHHH-CCCEEEEeCC
Confidence 42 1236899999999999999999 5999999876
No 13
>PRK07486 amidase; Provisional
Probab=100.00 E-value=2.5e-68 Score=525.70 Aligned_cols=253 Identities=31% Similarity=0.380 Sum_probs=224.9
Q ss_pred CeeEEEecCH-HHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCCCcchHHHHH
Q psy15831 1 MLNAVVDERF-NLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRL 79 (304)
Q Consensus 1 ~lna~~~~~~-~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~ 79 (304)
.+||+++.+. ++|+++|+++|+++++++ ..+||+||||+|||+|+++|++||+||..++++++.+|+++|++
T Consensus 45 ~~na~~~~~~~~~al~~A~~~d~~~~~g~-------~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~dA~vV~r 117 (484)
T PRK07486 45 AVNAIVALRDRDALLAEAAEKDAALARGE-------YRGWLHGMPQAPKDLAPTKGIRTTLGSPIFADQVPQEDAIVVER 117 (484)
T ss_pred CCceEEEeCccHHHHHHHHHHHHHHhcCC-------CCCCcCCCeEEEecccccCCcCcccccHhhCCCCCCCcHHHHHH
Confidence 3799999866 557999999999988875 25899999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCcee
Q psy15831 80 LRQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFG 159 (304)
Q Consensus 80 L~~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~g 159 (304)
|+++|||++||||||||+++..+.|++||+|+||||+.|+|||||||||++||+|++++++|||+|||||+||+|||+||
T Consensus 118 Lr~AGaii~GKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~pGGSSgGsAaaVAaG~~~~aiGtDtgGSIRiPAa~cGvvG 197 (484)
T PRK07486 118 MRAAGAIFIGKTNTPEFGLGSHTYNPVYGATRNPYDPSRSAGGSSGGAAAALALRMLPVADGSDMMGSLRNPAAFNNVYG 197 (484)
T ss_pred HHHCCCeeEEecCchHHhcCCCCCCCCCCCCCCCCCCCCCCCcCcHHHHHHHHcCCCceEeecCCCCCeecchhhhCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCCCCCCC-CCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccCCc---------cccCCcEEEE
Q psy15831 160 HKPSPGFVSNVGHM-PSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEP---------VIVQDIKVFY 229 (304)
Q Consensus 160 lkPT~g~vs~~G~~-p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~~~---------~~~~~lrig~ 229 (304)
||||+|+||+.|.. +.++ ++|++|||+|||+|+++++++|.+. +..++.+...+ ...+++||||
T Consensus 198 lKPT~G~vs~~g~~~~~~~-----s~d~~Gp~arsv~D~a~~~~~l~g~-d~~d~~~~~~~~~~~~~~~~~~~~~lrigv 271 (484)
T PRK07486 198 FRPSQGRVPHGPGGDVFVQ-----QLGTEGPMGRTVEDVALLLAVQAGY-DPRDPLSLAEDPARFAQPLEADLRGKRIAW 271 (484)
T ss_pred ecCCCCcccCCCCcccccc-----cccccCCeeCCHHHHHHHHHHHhCC-CCCCCccccCCCcchhhHhccCCCCCEEEE
Confidence 99999999998755 5666 8999999999999999999999996 33333222110 1357899999
Q ss_pred ECCCCCCcCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC
Q psy15831 230 MEDDGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI 270 (304)
Q Consensus 230 ~~~~g~~~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~ 270 (304)
+.+.. ....++++++++++++++.|++ +|++|+++.+
T Consensus 272 ~~~~~---~~~~~~~~v~~a~~~a~~~L~~-~G~~v~~~~~ 308 (484)
T PRK07486 272 LGDWG---GYLPMEAGVLELCEAALATLRE-LGCDVEAALP 308 (484)
T ss_pred eCccc---CCCCCCHHHHHHHHHHHHHHHH-CCCEEEEeCC
Confidence 87531 1135799999999999999999 5999988765
No 14
>PRK08137 amidase; Provisional
Probab=100.00 E-value=1.7e-68 Score=528.32 Aligned_cols=248 Identities=27% Similarity=0.372 Sum_probs=223.3
Q ss_pred eeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCC-CccCCCCCCCCCCCCCCcchHHHHHH
Q psy15831 2 LNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVK-GCSNNAGRIKPKERIATDDAETVRLL 80 (304)
Q Consensus 2 lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~-g~~tt~Gs~~~~~~~~~~da~~V~~L 80 (304)
+||+++..++ |+++|+++|+++++++ .++||+||||+|||+|+++ |++||+||..++++++.+|+++|++|
T Consensus 43 lna~~~~~~~-al~~A~~~d~~~~~g~-------~~gpL~GvPi~vKD~~~v~~G~~tt~Gs~~~~~~~~~~DA~vV~rL 114 (497)
T PRK08137 43 LNAVIELNPD-AEADAAALDAERKAGK-------VRGPLHGIPVLLKDNIDAADPMPTTAGSLALAGNRPTRDAFLVARL 114 (497)
T ss_pred eeEEEEeCHH-HHHHHHHHHHHHhcCC-------CCCCcCCceeeeecceeecCCCCcCcCcHhhcCCCCCcCcHHHHHH
Confidence 7999998775 9999999999988875 2589999999999999999 99999999999999999999999999
Q ss_pred HHcCCeEEEEcCcCccccc-----cCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCccccccccc
Q psy15831 81 RQAGAIILCVTNTPELCMN-----WETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFT 155 (304)
Q Consensus 81 ~~aGai~igkt~~~e~~~~-----~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~ 155 (304)
+++|||++||||||||+++ .+++|++||+|+||||+.|++||||||||++||+|++++++|||+|||||+||+||
T Consensus 115 r~AGAii~GKTn~~Efa~~~~~~~~~g~n~~~G~t~NP~~~~~~~GGSSgGsAaAVAaG~~~~aiGtDtgGSiRiPAa~c 194 (497)
T PRK08137 115 RDAGAVILGKANLSEWANFRSTRSSSGWSARGGLTRNPYALDRSPCGSSSGSGAAVAAGLAAVAIGTETDGSITCPAAIN 194 (497)
T ss_pred HHCCCEEEeecChHHhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCccHHHHHHHcCCCceeeecCCCCccccchhhc
Confidence 9999999999999999954 34589999999999999999999999999999999999999999999999999999
Q ss_pred CceeeccCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccCC---------cc---ccC
Q psy15831 156 GVFGHKPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLE---------PV---IVQ 223 (304)
Q Consensus 156 Gv~glkPT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~~---------~~---~~~ 223 (304)
|+||||||+||||+.|++|.++ ++|++|||+|+|+|+++++++|.+.| ..++.+... .. ..+
T Consensus 195 Gv~GlKPT~Grvs~~G~~~~~~-----s~d~~Gp~arsv~D~a~~l~vl~g~d-~~d~~~~~~~~~~~~~~~~~~~~~~~ 268 (497)
T PRK08137 195 GLVGLKPTVGLVSRDGIVPISH-----SQDTAGPMTRTVADAAAVLTAIAGGD-PADPATASAPAPAVDYVAALDADALR 268 (497)
T ss_pred CeeeecCCCCceeCCCCCCccc-----ccCcccCeeCCHHHHHHHHHHHhCCC-CCCcccccCCCCccchhhhccccccC
Confidence 9999999999999999999887 89999999999999999999999862 223222111 11 257
Q ss_pred CcEEEEECCCCCCcCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC
Q psy15831 224 DIKVFYMEDDGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI 270 (304)
Q Consensus 224 ~lrig~~~~~g~~~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~ 270 (304)
++||||+.+. + ..+++++++++++++.|++ +|++|+++++
T Consensus 269 ~lrIgv~~~~-----~-~~~~~v~~a~~~a~~~L~~-~G~~v~~~~~ 308 (497)
T PRK08137 269 GARLGVARNY-----L-GYHPEVDAQFERALAELKA-AGAVVIDVVD 308 (497)
T ss_pred CCEEEEEchh-----c-cCCHHHHHHHHHHHHHHHH-CCCEEEeccC
Confidence 8999998752 2 5799999999999999999 5999999876
No 15
>TIGR02715 amido_AtzE amidohydrolase, AtzE family. Members of this protein family are aminohydrolases related to, but distinct from, glutamyl-tRNA(Gln) amidotransferase subunit A. The best characterized member is the biuret hydrolase of Pseudomonas sp. ADP, which hydrolyzes ammonia from the three-nitrogen compound biuret to yield allophanate. Allophanate is also an intermediate in urea degradation by the urea carboxylase/allophanate hydrolase pathway, an alternative to urease.
Probab=100.00 E-value=4.5e-68 Score=519.81 Aligned_cols=241 Identities=31% Similarity=0.433 Sum_probs=218.5
Q ss_pred eeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCC-CcchHHHHHH
Q psy15831 2 LNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIA-TDDAETVRLL 80 (304)
Q Consensus 2 lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~-~~da~~V~~L 80 (304)
+||+++.++|+|+++|+++|+++++++ ..+||+||||+|||+|+++|++||+||..+.++++ .+|+++|++|
T Consensus 34 lna~~~~~~~~al~~A~~~d~~~~~g~-------~~gpL~GvPv~vKD~~~v~G~~tt~Gs~~~~~~~p~~~dA~vV~rL 106 (452)
T TIGR02715 34 LNAFTAVTAERALADAARIDADLAAGS-------PLGPLAGVPFAVKNLFDVAGLTTLAGAKINRDLAPAKRDATLVQRL 106 (452)
T ss_pred ccEEEEeCHHHHHHHHHHHHHHHHCCC-------CCCCcCCCeEEEEeccccCCceeCcCChhhccCCCCCCCHHHHHHH
Confidence 799999999999999999999988875 25899999999999999999999999999999887 7999999999
Q ss_pred HHcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCceee
Q psy15831 81 RQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGH 160 (304)
Q Consensus 81 ~~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~gl 160 (304)
++||||++||||||||+++.++.|++||+|+||||+.|++||||||||++||+|++++++|||+|||||+||+|||+|||
T Consensus 107 ~~AGAii~GkTn~~Ef~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaVAag~~~~alGtDtgGSiRiPAa~cGv~Gl 186 (452)
T TIGR02715 107 SAAGAVLVGALNMDEFAYGFTTENAHYGPTRNPHDLTRIAGGSSGGSAAAVAAGLVPFSLGSDTNGSIRVPASLCGVFGL 186 (452)
T ss_pred HHCCCEEEEeccCHhhhcCCCCCCCCCCCCCCCCCCCCCCCcchHHHHHHHHCCCCceEEeeCCCCcchhhHHHhCceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccCCc---------cccCCcEEEEEC
Q psy15831 161 KPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEP---------VIVQDIKVFYME 231 (304)
Q Consensus 161 kPT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~~~---------~~~~~lrig~~~ 231 (304)
|||+|+||+.|++|.++ ++|++|||+|+|+|+++++++|.+. +..++.....+ ...+++||||+.
T Consensus 187 KPT~Grvs~~G~~~~~~-----s~d~~Gp~arsv~D~a~~l~~l~g~-~~~d~~~~~~p~~~~~~~~~~~~~~lrig~~~ 260 (452)
T TIGR02715 187 KPTYGRLSRQGVFPFVA-----SLDHVGPFARSVEDLALAYDVMQGP-DPQDPFCTDRPAEPTVPLLPAGISGLRIAVLG 260 (452)
T ss_pred eCCCCCccCCCCCCCcc-----ccCcccCeeCCHHHHHHHHHHhcCC-CCCCcccccCCCcchhhhhhcCCCCCEEEEEC
Confidence 99999999999999888 9999999999999999999999985 22332221111 135789999986
Q ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHh
Q psy15831 232 DDGSCTLTDGVDLDIKEGIRKAVHHLEY 259 (304)
Q Consensus 232 ~~g~~~~~~~~~~~v~~a~~~a~~~L~~ 259 (304)
+. +....+|+++++++++++.|+.
T Consensus 261 ~~----~~~~~~~~v~~a~~~a~~~L~~ 284 (452)
T TIGR02715 261 GW----FQQNADPEALAAVGRVAKALGA 284 (452)
T ss_pred cc----ccCCCCHHHHHHHHHHHHhcCC
Confidence 52 2346899999999999999865
No 16
>PRK12470 amidase; Provisional
Probab=100.00 E-value=5.9e-68 Score=520.08 Aligned_cols=251 Identities=33% Similarity=0.371 Sum_probs=224.1
Q ss_pred eeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCCCcchHHHHHHH
Q psy15831 2 LNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLLR 81 (304)
Q Consensus 2 lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L~ 81 (304)
+||++..++|+|+++|+++|+++++++ +. ||+||||+|||+|+++|++||+||..+ ++++.+|+++|++|+
T Consensus 43 lna~~~~~~~~a~~~A~~~d~~~~~g~-------~~-pL~GvPi~vKD~~~v~G~~tt~Gs~~~-~~~~~~dA~vV~rLr 113 (462)
T PRK12470 43 LRAYRVVLFDRARAEAEAAQQRLDAGE-------RL-PLLGVPIAIKDDVDVAGEVTTYGSAGH-GPAATSDAEVVRRLR 113 (462)
T ss_pred cCEEEEeCHHHHHHHHHHhHHHHhcCC-------CC-CcCCCeEEEecCcccCCceeCCCCccc-CCCCCccHHHHHHHH
Confidence 799999999999999999999988875 24 999999999999999999999999986 578899999999999
Q ss_pred HcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCceeec
Q psy15831 82 QAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGHK 161 (304)
Q Consensus 82 ~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~glk 161 (304)
++|||++||||||||+++..+.|++||+|+||||+.|+|||||||||+|||+|++++++|||||||||+||+|||+||||
T Consensus 114 ~aGaii~GKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaAVAaG~~~~alGtDtgGSiRiPAa~cGvvG~K 193 (462)
T PRK12470 114 AAGAVIIGKTNVPELMIMPFTESLAFGATRNPWDPNRTPGGSSGGSAAAVAAGLAPVALGSDGGGSIRIPSTWCGLFGLK 193 (462)
T ss_pred HCCCeEEEEeChHhHhcCCCCCCCCCCCCCCCCCCCCCCCcchhHHHHHHHcCCCceEEecCCCCchhhchhhhCceeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccCC--ccccCCcEEEEECCCCCCcCC
Q psy15831 162 PSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLE--PVIVQDIKVFYMEDDGSCTLT 239 (304)
Q Consensus 162 PT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~~--~~~~~~lrig~~~~~g~~~~~ 239 (304)
||+|+||+.|+.|.++ ++|++|||+|+|+|+++++++|.+. + ..+.++.. ....+++||||+.+.... +.
T Consensus 194 PT~G~vs~~g~~~~~~-----~ld~~Gp~ar~v~D~a~~~~vl~~~-~-~~~~~~~~~~~~~~~~lrig~~~~~~~~-~~ 265 (462)
T PRK12470 194 PQRDRISLEPHDGAWQ-----GLSVNGPIARSVMDAALLLDATTTV-P-GPEGEFVAAAAREPGRLRIALSTRVPTP-LP 265 (462)
T ss_pred CCCCCcCCCCCCCccc-----CccccCCeeCCHHHHHHHHHHhcCC-C-CCCcchhhhhccCCCCCEEEEECCcccc-CC
Confidence 9999999999999887 9999999999999999999999984 2 22112111 113477999998753100 12
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCcEEEEecC
Q psy15831 240 DGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI 270 (304)
Q Consensus 240 ~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~ 270 (304)
..++++++++++++++.|++ +|++|+++++
T Consensus 266 ~~~~~~v~~a~~~a~~~L~~-~G~~v~~~~~ 295 (462)
T PRK12470 266 VRCGKQELAAVHQAGALLRD-LGHDVVVRDP 295 (462)
T ss_pred CCCCHHHHHHHHHHHHHHHh-CCCEEEEeCC
Confidence 46899999999999999999 5999998865
No 17
>PRK09201 amidase; Provisional
Probab=100.00 E-value=9.7e-68 Score=519.05 Aligned_cols=242 Identities=32% Similarity=0.448 Sum_probs=219.2
Q ss_pred CeeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCC-CcchHHHHH
Q psy15831 1 MLNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIA-TDDAETVRL 79 (304)
Q Consensus 1 ~lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~-~~da~~V~~ 79 (304)
.+||+++.++|+|+++|+++|+++++++ ..+||+||||+|||+|+++|++||+||..+.++++ .+|+++|++
T Consensus 40 ~lna~~~~~~d~al~~A~~~d~~~~~g~-------~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~~dA~vV~~ 112 (465)
T PRK09201 40 QLNAFTAVTAERALAEAARIDAARAAGE-------PLGPLAGVPFAVKNLFDVAGLTTLAGSKINRDRPPATRDATAVRR 112 (465)
T ss_pred CceEEEEcCHHHHHHHHHHHHHHHHcCC-------CCCCcCCceEEEEeccccCCcccCcCChhhccCCCCCCChHHHHH
Confidence 3799999999999999999999988875 26899999999999999999999999999999888 699999999
Q ss_pred HHHcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCcee
Q psy15831 80 LRQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFG 159 (304)
Q Consensus 80 L~~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~g 159 (304)
|+++|||++||||||||+++.++.|++||+|+||||+.|+|||||||||++||+|++++++|||+|||||+||+|||+||
T Consensus 113 Lr~aGAii~GKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~pGGSSgGsAaaVAaG~~~~alGtDtgGSIRiPAa~cGv~G 192 (465)
T PRK09201 113 LEAAGAVLVGALNMDEYAYGFTTENSHYGATRNPHDLTRIAGGSSGGSAAAVAAGLVPFTLGSDTNGSIRVPASLCGIFG 192 (465)
T ss_pred HHHCCCEEEEecChHHHhcCCCCCCCCCCCCCCCCCCCCCCCcchHHHHHHHHcCCCceEEecCCCCcchhhhHHhCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccCCc---------cccCCcEEEEE
Q psy15831 160 HKPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEP---------VIVQDIKVFYM 230 (304)
Q Consensus 160 lkPT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~~~---------~~~~~lrig~~ 230 (304)
||||+|+||+.|++|.++ ++|++|||+|+|+|+++++++|.+. +..++.....+ ...+++||||+
T Consensus 193 ~KPT~Grvs~~G~~~~~~-----s~d~~Gp~arsv~D~a~~l~~l~g~-d~~d~~~~~~~~~~~~~~~~~~~~~lrig~~ 266 (465)
T PRK09201 193 LKPTYGRLSRAGSFPFVA-----SLDHIGPFARSVADLALVYDVLQGP-DPQDPFQADRPAEPTAPLLDRGAEGLRIAVL 266 (465)
T ss_pred eeCCCCccCCCCCCCccc-----ccCcccCccCCHHHHHHHHHHhcCC-CCCCcccccCCCcchhhhhccCCCCCEEEEE
Confidence 999999999999999887 9999999999999999999999986 33333222111 12477999999
Q ss_pred CCCCCCcCCCCCCHHHHHHHHHHHHHHHh
Q psy15831 231 EDDGSCTLTDGVDLDIKEGIRKAVHHLEY 259 (304)
Q Consensus 231 ~~~g~~~~~~~~~~~v~~a~~~a~~~L~~ 259 (304)
.+. +...++|+++++++++++.|+.
T Consensus 267 ~~~----~~~~~~~~v~~a~~~a~~~L~~ 291 (465)
T PRK09201 267 GGY----FAQWADPEARAAVDRVAKALGA 291 (465)
T ss_pred Ccc----ccCCCCHHHHHHHHHHHHHccC
Confidence 653 2346899999999999999865
No 18
>PRK07869 amidase; Provisional
Probab=100.00 E-value=1.1e-67 Score=519.13 Aligned_cols=247 Identities=26% Similarity=0.320 Sum_probs=219.0
Q ss_pred eeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCCCcchHHHHHHH
Q psy15831 2 LNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLLR 81 (304)
Q Consensus 2 lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L~ 81 (304)
+||+++..+|+|+++|+++|. ..+||+||||+|||+|+++|++||+||..+.++++.+|+++|++|+
T Consensus 49 lna~~~~~~e~a~~~A~~~d~-------------~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~dA~vV~rLr 115 (468)
T PRK07869 49 LNALAYAAFDRARDRAARPGS-------------QGGFFSGVPTFIKDNVDVAGLPTMHGSDAWTPRPAKADSDFARQFL 115 (468)
T ss_pred cCEEEEcCHHHHHHHHHhcCC-------------CCCCcCCCeEEEecCcccCCcccCcccHhhcCCCCCCcHHHHHHHH
Confidence 799999999999999998862 1489999999999999999999999999999999999999999999
Q ss_pred HcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCceeec
Q psy15831 82 QAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGHK 161 (304)
Q Consensus 82 ~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~glk 161 (304)
+||||++||||||||+++..+.|++||+|+||||+.|+|||||||||++||+|++++++|||||||||+||+|||+||||
T Consensus 116 ~AGAii~GKTn~~Efa~~~~~~n~~~G~t~NP~d~~~~pGGSSgGsAaAVAaG~~~~alGTDtgGSiRiPAa~cGvvG~K 195 (468)
T PRK07869 116 ATGLISLGKTQLPEFGFSASTEHPRLGPVRNPWNTDYSAGASSGGSAALVAAGVVPIAHANDGGGSIRIPAACCGLVGLK 195 (468)
T ss_pred HCCCEEEEecCchHhhcCCCCCCCCCCCcCCCCCCCCCCCCCchHHHHHHHcCCCceeeecCCCCccccchhhcCeeeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccc---cCCccccCCcEEEEECCCCCCcC
Q psy15831 162 PSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLR---LLEPVIVQDIKVFYMEDDGSCTL 238 (304)
Q Consensus 162 PT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~---~~~~~~~~~lrig~~~~~g~~~~ 238 (304)
||+|++|+.|+.+..+ .++|++|||+|+|+|++++++++.+.++. +..+ .......+++|||++.++. .
T Consensus 196 PT~G~vs~~g~~~~~~----~~~d~~Gp~arsv~D~a~l~~v~~g~~~~-~~~~~~~~~~~~~~~~lrigv~~~~~---~ 267 (468)
T PRK07869 196 PSRGRLPLDPELRRLP----VNIVANGVLTRTVRDTAAFYREAERYYRN-PKLPPIGDVTGPGKQRLRIAVVTDSV---T 267 (468)
T ss_pred CCCCcccCCCCcccCc----cccceecCeeCcHHHHHHHHHHHhccCcc-CCCCchhhhcccCCCCCEEEEECCcc---C
Confidence 9999999999876332 15799999999999999999999985321 1111 0001135789999987642 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC
Q psy15831 239 TDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI 270 (304)
Q Consensus 239 ~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~ 270 (304)
...++|+++++++++++.|++ +|++|+++++
T Consensus 268 ~~~~~p~v~~a~~~a~~~L~~-~G~~v~~~~~ 298 (468)
T PRK07869 268 GREADPEVREAVLATARLLEE-LGHRVEPVDL 298 (468)
T ss_pred CCCCCHHHHHHHHHHHHHHHH-CCCEEEEeCC
Confidence 146899999999999999999 5999999876
No 19
>PRK06061 amidase; Provisional
Probab=100.00 E-value=3.6e-67 Score=517.04 Aligned_cols=253 Identities=33% Similarity=0.379 Sum_probs=221.5
Q ss_pred eeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCCCcchHHHHHHH
Q psy15831 2 LNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLLR 81 (304)
Q Consensus 2 lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L~ 81 (304)
+||+++.++|+|+++|+++|++++++. .+||+||||+|||+|+++|++||+||.... .++.+|+++|++|+
T Consensus 52 lna~~~~~~~~al~~A~~~d~~~~~g~--------~~pL~GvPv~vKD~~~v~G~~tt~Gs~~~~-~~a~~dA~vV~~Lr 122 (483)
T PRK06061 52 LNAFRVVRAEAALAEAAEADRRRAAGD--------RLPLLGVPIAVKDDVDVAGVPTAFGTAGEV-PPATADSEVVRRLR 122 (483)
T ss_pred CCEEEEeChHHHHHHHHHHHHHHhcCC--------CCCcCCCeEEEEcccccCCceecCCCcccC-CCCCCCHHHHHHHH
Confidence 799999999999999999999988774 259999999999999999999999998532 34469999999999
Q ss_pred HcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCceeec
Q psy15831 82 QAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGHK 161 (304)
Q Consensus 82 ~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~glk 161 (304)
++|||++||||||||+++.++.|++||+|+||||+.|++||||||||++||+|++++++|||+|||||+||+||||||||
T Consensus 123 ~AGAii~GKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaAVAaG~~~~alGtDtgGSIRiPAa~cGvvG~K 202 (483)
T PRK06061 123 AAGAVIVGKTNTCELGQWPFTSGPAFGHTRNPWSRDHTPGGSSGGSAAAVAAGLVTAAIGSDGAGSVRIPAAWTHLVGIK 202 (483)
T ss_pred HCCCEEEEecCcchhccCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHcCCCceEeecCCCCcchhchhhcCceeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccCC-------ccccCCcEEEEECCCC
Q psy15831 162 PSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLE-------PVIVQDIKVFYMEDDG 234 (304)
Q Consensus 162 PT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~~-------~~~~~~lrig~~~~~g 234 (304)
||+|++|+.|+.+... ++|++|||+|+|+|+++++++|.+.| ..++..... ....+++||||+.+++
T Consensus 203 PT~G~vs~~g~~~~~~-----~~d~~Gp~arsv~D~a~~~~~l~g~d-~~d~~~~~~~~~~~~~~~~~~~lrig~~~~~~ 276 (483)
T PRK06061 203 PQRGRISTWPLPEAFN-----GLTVNGPLARTVADAALLLDAASGNH-PGDRHRPPPVTVSDAVGRAPGPLRIALSTRFP 276 (483)
T ss_pred CCCCccCCCCCCcccc-----cCceeCCEeCCHHHHHHHHHHHhCCC-CCCCcccCCccchhhhccCCCCcEEEEECCcc
Confidence 9999999999887766 88999999999999999999999852 222211110 1134779999987643
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC
Q psy15831 235 SCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI 270 (304)
Q Consensus 235 ~~~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~ 270 (304)
...+...++|+++++++++++.|++ +|++|+++++
T Consensus 277 ~~~~~~~~~p~v~~a~~~a~~~L~~-~G~~v~~~~~ 311 (483)
T PRK06061 277 FTGFPAKLHPEIRAAVRRVAEQLAL-LGHTVVPADP 311 (483)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHH-CCCEEEEeCC
Confidence 1001245799999999999999999 5999998765
No 20
>PRK06529 amidase; Provisional
Probab=100.00 E-value=9.9e-67 Score=514.08 Aligned_cols=256 Identities=32% Similarity=0.413 Sum_probs=219.9
Q ss_pred CeeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecC-CCCCCccCCCCCCCCCCCCCCcchHHHHH
Q psy15831 1 MLNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKES-VAVKGCSNNAGRIKPKERIATDDAETVRL 79 (304)
Q Consensus 1 ~lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~-~~v~g~~tt~Gs~~~~~~~~~~da~~V~~ 79 (304)
.+||+++.++|+|+++|+++|+. + +|||||||+|||+ |+++|++||+||..++++++.+|+++|++
T Consensus 37 ~lna~~~~~~e~al~~A~~~d~~---~----------~PL~GvPi~vKD~~~~v~G~~tt~Gs~~~~~~~~~~Da~vV~r 103 (482)
T PRK06529 37 TLNAIVSERYEEALEEAKQRDFS---G----------KPFAGVPIFLKDLGQELKGQLSTSGSRLFKNYQATKTDLYVKR 103 (482)
T ss_pred cccEEEecChHHHHHHHHhcccc---C----------CCcCCCeEEEecCCcccCCCccCcchHHhcCCCCCcchHHHHH
Confidence 37999999999999999998841 1 5999999999998 79999999999999999999999999999
Q ss_pred HHHcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCcee
Q psy15831 80 LRQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFG 159 (304)
Q Consensus 80 L~~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~g 159 (304)
|++||||++||||||||+++.++.|++||+|+||||+.|++||||||||++||+|++++++|||+|||||+||+||||||
T Consensus 104 Lr~AGAiilGKTn~~E~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaVAaG~~~~aiGtDtgGSIRiPAa~cGvvG 183 (482)
T PRK06529 104 LEDLGFIILGRSNTPEFGFKNISDSSLHGPVNLPFDNSRNAGGSSGGAAALVSSGIVALAAASDGGGSIRIPASFNGLIG 183 (482)
T ss_pred HHHCCCeEEEecCchHhhcCCCCCCcCCCCCCCCCCCCCCCCcCcHHHHHHHHcCCCceeeecCCCCCeecChHhhCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCCCCCCCCCCCccCCCCcee-eccccCCcchHHHHHHHHcCCCccccccccCC----c---cccCCcEEEEEC
Q psy15831 160 HKPSPGFVSNVGHMPSSEDKMWNTYFT-IGLLARYAEDLPLVLHLMISDREQAKSLRLLE----P---VIVQDIKVFYME 231 (304)
Q Consensus 160 lkPT~g~vs~~G~~p~~~~~~~~~~~~-~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~~----~---~~~~~lrig~~~ 231 (304)
||||+|+||..+..+.+. +.++ .|||+|+|+|+++++++|.+. +..++.++.. . ...+++||||+.
T Consensus 184 lKPT~Grvp~~~~~~~~~-----~~~~~~Gpiarsv~D~a~~l~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~lrIg~~~ 257 (482)
T PRK06529 184 LKPSRGRIPVGPGSYRGW-----QGASVHFALTKSVRDTRRLLYYLQMY-QMESPFPLATLSKESLFQSLQRPLKIAFYQ 257 (482)
T ss_pred EccCCCccCCCCCCcccc-----ccccccCCccCcHHHHHHHHHHhhCC-CCCCCcccCCcccchhccccCCCCEEEEEC
Confidence 999999999865543333 4454 489999999999999999985 2233333211 0 014779999997
Q ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEec-C--ChHHHHHHH
Q psy15831 232 DDGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVN-I--DLEDVFELV 279 (304)
Q Consensus 232 ~~g~~~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~-~--~~~~~~~~~ 279 (304)
++. +...++|+++++++++++.|++ +|++|++++ + .+++....|
T Consensus 258 ~~~---~~~~~~p~v~~a~~~a~~~L~~-~G~~v~ev~~~p~~~~~~~~~~ 304 (482)
T PRK06529 258 RSP---DGSPVSLDAAKALKQAVTFLRE-QGHEVVELEEFPLDMTEVMRSY 304 (482)
T ss_pred CCC---CCCCCCHHHHHHHHHHHHHHHh-CCCEEEEcCCCCCCHHHHHHHH
Confidence 642 2246899999999999999999 599999996 2 344444433
No 21
>PRK07235 amidase; Provisional
Probab=100.00 E-value=5e-67 Score=517.48 Aligned_cols=260 Identities=24% Similarity=0.332 Sum_probs=227.6
Q ss_pred eeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCCCcchHHHHHHH
Q psy15831 2 LNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLLR 81 (304)
Q Consensus 2 lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L~ 81 (304)
.|++.....|+++..|++.+.. .+|+ ..+||+||||+|||+|+++|++||+||..++++++.+|+++|+||+
T Consensus 58 ~~~~~~~~~~~~~~~a~~~~~~-~~g~-------~~gpL~GvPiavKD~i~v~G~ptt~Gs~~~~~~~p~~DA~vV~rL~ 129 (502)
T PRK07235 58 RTPGYRPEAEENPYGAWYVKTS-IKGA-------AEGKLAGKTVALKDNVAVAGVPMMNGSSTLEGFVPSFDATVVTRLL 129 (502)
T ss_pred cccccccCcccChhcChhhhhc-cCCC-------CCCCcCCceEEEecccccCCcccCccChhhcCCCCCCCHHHHHHHH
Confidence 3667777778888888888876 4554 3689999999999999999999999999999999999999999999
Q ss_pred HcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCceeec
Q psy15831 82 QAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGHK 161 (304)
Q Consensus 82 ~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~glk 161 (304)
+||||++|||||+||+++..+.|+.||+|+||||+.|++||||||||++||+|+++++||||+|||||+||+||||||||
T Consensus 130 ~AGAii~GKTn~~Ef~~~~~t~n~~~G~t~NP~~~~~~~GGSSgGsAAaVAaG~v~~aiGtDtGGSIRiPAa~cGvvGlK 209 (502)
T PRK07235 130 DAGATIVGKATCEDLCFSGGSHTSDPGPVHNPRDPGYSAGGSSSGSAALVAAGEVDMAIGGDQGGSIRIPSAWCGIYGMK 209 (502)
T ss_pred HCCCEEEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCCCeEEecCCCCCcCccHHHcCcceec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccC-C---------ccccCCcEEEEEC
Q psy15831 162 PSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLL-E---------PVIVQDIKVFYME 231 (304)
Q Consensus 162 PT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~-~---------~~~~~~lrig~~~ 231 (304)
||+|+||+.|++|.++ ++|++|||+|+|+|+++++++|.+. +..++.... . ....+++|||++.
T Consensus 210 PT~G~vp~~G~~~~~~-----sld~~Gpmarsv~D~a~ll~viag~-d~~d~~~~~~~~~~~~~~~l~~~~~~lrIgv~~ 283 (502)
T PRK07235 210 PTHGLVPYTGAFPIER-----TIDHLGPMTATVRDNALLLEVIAGR-DGLDPRQPAQPPVDDYTAALDRGVKGLKIGILR 283 (502)
T ss_pred CCCcccCCCCCCCccc-----ccCeeeceeCCHHHHHHHHHHHcCC-CCCCccccccCCccchhHHhccCCcCCEEEEec
Confidence 9999999999999887 8999999999999999999999996 333332221 0 0135789999987
Q ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC-ChHHHHHHH
Q psy15831 232 DDGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI-DLEDVFELV 279 (304)
Q Consensus 232 ~~g~~~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~-~~~~~~~~~ 279 (304)
++ +....++++++++++++++.|++ +|++|+++++ .......+|
T Consensus 284 ~~---~~~~~~~~~v~~a~~~a~~~L~~-~G~~V~~v~~p~~~~~~~~~ 328 (502)
T PRK07235 284 EG---FGLPNSEPEVDEAVRAAAKRLED-LGATVEEVSIPLHRLALAIW 328 (502)
T ss_pred cc---cCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEeCCCchhhHHHHH
Confidence 63 11245799999999999999999 5999999987 444444444
No 22
>TIGR02713 allophanate_hyd allophanate hydrolase. Allophanate hydrolase catalyzes the second reaction in an ATP-dependent two-step degradation of urea to ammonia and C02, following the action of the biotin-containing urea carboxylase. The yeast enzyme, a fusion of allophanate hydrolase to urea carboxylase, is designated urea amidolyase.
Probab=100.00 E-value=1.7e-66 Score=517.94 Aligned_cols=249 Identities=26% Similarity=0.344 Sum_probs=222.8
Q ss_pred eEEEecC-HHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCCCcchHHHHHHH
Q psy15831 3 NAVVDER-FNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLLR 81 (304)
Q Consensus 3 na~~~~~-~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L~ 81 (304)
|+++... .|+|+++|+++|++++++. .+||+||||+|||+||++|++||+||+.+. +.+.+|+++|++|+
T Consensus 2 ~a~i~~~~~e~al~~A~~ld~~~~~~~--------~~PL~GvP~aVKD~idvaG~pTTaGs~~~~-~~p~~DA~vV~rLr 72 (561)
T TIGR02713 2 EAWISLLSEEDLLAQAAALDARDARPE--------RLPLYGVPFAVKDNIDVAGLPTTAACPAFA-YTPEEDATVVALLR 72 (561)
T ss_pred cEEEEeCCHHHHHHHHHHHHHHHhcCC--------CCCccCCeEEEEcccccCCCccCcCCHhHc-CCCCcCHHHHHHHH
Confidence 6888875 4899999999999887664 389999999999999999999999999986 78899999999999
Q ss_pred HcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCceeec
Q psy15831 82 QAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGHK 161 (304)
Q Consensus 82 ~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~glk 161 (304)
++|||++||||||||+++..+.|+.||+|+||||+.|++||||||||++||+|++++++|||||||||+||+|||+||||
T Consensus 73 ~AGAIiiGKTN~~Efa~g~~g~n~~~G~t~NP~d~~~~~GGSSsGSAaAVAaG~v~~alGTDtgGSiRiPAa~cGlvGlK 152 (561)
T TIGR02713 73 AAGAIVVGKTNLDQFATGLVGTRSPYGAVRNAFDPAYISGGSSSGSAVAVARGLVPFALGTDTAGSGRVPAALNNIVGLK 152 (561)
T ss_pred HCCCEEEEEeCchHhhcCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCCceEEeecCCCcchhhhHHhCceeEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccCCc-----cccCCcEEEEECCCCCC
Q psy15831 162 PSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEP-----VIVQDIKVFYMEDDGSC 236 (304)
Q Consensus 162 PT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~~~-----~~~~~lrig~~~~~g~~ 236 (304)
||+|++|+.|++|.++ ++|++|||+|+|+|+++++++|.+. +..++++...+ ...+++|||++..+.
T Consensus 153 PT~G~vs~~Gv~p~~~-----slD~vG~~Arsv~D~~~~l~v~~g~-d~~d~~s~~~p~~~~~~~~~~lrigv~~~~~-- 224 (561)
T TIGR02713 153 PTKGLVSTTGVVPACR-----SLDCVSIFALTVADAEQVLRIAAAP-DARDPYSRPLPAAALRRLPPPPRVGVPRAAQ-- 224 (561)
T ss_pred cCCCCccCCCcccccc-----CCCeeechhCCHHHHHHHHHhhcCC-CCcCccccCCCchhhcccCCCCEEEEECchh--
Confidence 9999999999999998 9999999999999999999999986 33344332211 123679999997432
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC
Q psy15831 237 TLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI 270 (304)
Q Consensus 237 ~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~ 270 (304)
.....+++++++++++++.|++ +|++|+++++
T Consensus 225 -~~~~~~~~v~~a~~~a~~~L~~-~G~~v~~v~~ 256 (561)
T TIGR02713 225 -LEFFGDSQAEAAFAAAVERLEA-LGVEVVEIDF 256 (561)
T ss_pred -cCCCCCHHHHHHHHHHHHHHHH-CCCEEEEecc
Confidence 1112588999999999999999 5999999987
No 23
>PRK08186 allophanate hydrolase; Provisional
Probab=100.00 E-value=1.9e-66 Score=521.76 Aligned_cols=250 Identities=26% Similarity=0.342 Sum_probs=222.7
Q ss_pred eeEEEecCH-HHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCCCcchHHHHHH
Q psy15831 2 LNAVVDERF-NLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLL 80 (304)
Q Consensus 2 lna~~~~~~-~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L 80 (304)
+|+++.... ++|+++|+++|++++. .+||+||||+||||||++|++||+||+.+. +.+.+|+++|++|
T Consensus 40 ~~a~i~~~~~~~a~~~A~~ld~~~~~----------~gPL~GVP~aVKDnidvaG~pTTaGs~~~~-~~p~~DA~vV~rL 108 (600)
T PRK08186 40 PEVWIHLRPEADLLAQAAALEARDPA----------ALPLYGVPFAVKDNIDVAGLPTTAACPAFA-YTPERDATVVARL 108 (600)
T ss_pred CCEEEEeCchHHHHHHHHHHhhhccc----------cCCCCCCeEEeecceecCCcccCcCCHhHc-CCCCcChHHHHHH
Confidence 689998876 6899999999986541 389999999999999999999999999986 6789999999999
Q ss_pred HHcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCceee
Q psy15831 81 RQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGH 160 (304)
Q Consensus 81 ~~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~gl 160 (304)
+++|||++|||||+||+++..+.|+.||+++||||+.|++||||||||++||+|+++++||||||||||+||+|||||||
T Consensus 109 r~AGAIilGKTN~~Efa~g~~g~n~~yG~t~NP~~~~~~~GGSSsGSAaAVAaG~~~~alGTDtgGSiRiPAa~cGlvGl 188 (600)
T PRK08186 109 RAAGAIVIGKTNLDQFATGLVGTRSPYGAVRNAFDPEYVSGGSSSGSAVAVALGLVSFALGTDTAGSGRVPAAFNNIVGL 188 (600)
T ss_pred HHCCCEEEeeecchhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCcceEeeecCCCcchhhhHHhCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccCCc-----cccCCcEEEEECCCCC
Q psy15831 161 KPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEP-----VIVQDIKVFYMEDDGS 235 (304)
Q Consensus 161 kPT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~~~-----~~~~~lrig~~~~~g~ 235 (304)
|||+|++|+.|++|.++ ++|++|||+|+|+|+++++++|.+. +..++.+...+ ...+++|||++.++.
T Consensus 189 KPT~G~vs~~Gv~p~~~-----slD~vGp~Arsv~D~~~~l~vl~g~-d~~D~~s~~~p~~~~~~~~~~lrIgv~~~~~- 261 (600)
T PRK08186 189 KPTLGLLSTRGVVPACR-----TLDCVSVFALTVDDADAVLAVMAGF-DPADPYSRANPADAPAALPAGPRVGVPRAAQ- 261 (600)
T ss_pred eCCCCcccCCCcccccc-----cCCceecccCCHHHHHHHHHHhcCC-CCCCcccccCCcccccccCCCCEEEEEcchh-
Confidence 99999999999999988 9999999999999999999999986 33343332211 134679999986432
Q ss_pred CcCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC-Ch
Q psy15831 236 CTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI-DL 272 (304)
Q Consensus 236 ~~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~-~~ 272 (304)
+....+++++++++++++.|++ +|++|+++++ .+
T Consensus 262 --~~~~~~~~v~~a~~~a~~~L~~-~G~~v~ei~~~~~ 296 (600)
T PRK08186 262 --LEFFGDAEAEAAFAAALARLEA-LGAELVEIDFSPF 296 (600)
T ss_pred --ccccCCHHHHHHHHHHHHHHHH-cCCeEEEecchhH
Confidence 1122589999999999999999 5999999987 44
No 24
>PRK06828 amidase; Provisional
Probab=100.00 E-value=3.4e-66 Score=509.83 Aligned_cols=252 Identities=25% Similarity=0.344 Sum_probs=222.5
Q ss_pred eeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCC-ccCCCCCCCCCCCCCCcchHHHHHH
Q psy15831 2 LNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKG-CSNNAGRIKPKERIATDDAETVRLL 80 (304)
Q Consensus 2 lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g-~~tt~Gs~~~~~~~~~~da~~V~~L 80 (304)
+||++..+++ |+++|+++|.++++++ ..+||+||||+|||+|+++| ++||+||..+.++++.+|+++|++|
T Consensus 50 lna~~~~~~~-al~~A~~~d~~~~~g~-------~~gpL~GvPv~vKD~~~v~gg~~tt~Gs~~~~~~~~~~da~vV~~L 121 (491)
T PRK06828 50 INSILEINPD-AIFIAEALDHERKIKG-------VRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQHISSEDAFLVTKL 121 (491)
T ss_pred eEEEEecCHH-HHHHHHHHHHHHhcCC-------CCCCccCceeeeeeeEEecCCCcCCcCcHHHcCCCCCCChHHHHHH
Confidence 7999998887 8999999999888775 25899999999999999996 9999999999999999999999999
Q ss_pred HHcCCeEEEEcCcCccccc-----cCCCCCCCCCCCCCCCC---CCCCCCCchHHHHHHHhCCcceeEeccCCCcccccc
Q psy15831 81 RQAGAIILCVTNTPELCMN-----WETFNKATGTTNNPYDT---RRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPA 152 (304)
Q Consensus 81 ~~aGai~igkt~~~e~~~~-----~~~~n~~~G~t~NP~~~---~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PA 152 (304)
+++|||++||||||||++. ..+.|+.||+|+||||+ .|+|||||||||++||+|++++++|||||||||+||
T Consensus 122 r~aGaii~GKTn~~Efa~~~~~~~~~g~n~~~G~t~NP~d~~~~~r~pGGSSgGsAaaVAag~~~~aiGtDtgGSiRiPA 201 (491)
T PRK06828 122 REAGAVILGKANMTELANFMSFEMWAGYSARGGQTINPYGTGEDDMFVGGSSTGSAIAVAANFTVVSVGTETDGSILSPA 201 (491)
T ss_pred HHCCCEEEeecChHHHhhccCCCCCCCcCCCCCCcCCCCCCccCCcCCCcCchHHHHHHHcCCCceEeecCCCCccccch
Confidence 9999999999999999964 47889999999999999 689999999999999999999999999999999999
Q ss_pred cccCceeeccCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccC----------Cc---
Q psy15831 153 MFTGVFGHKPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLL----------EP--- 219 (304)
Q Consensus 153 a~~Gv~glkPT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~----------~~--- 219 (304)
+||||+|||||+|++|+.|++|.++ ++|++|||+|+|+|+++++++|.+.| ..++.+.. ..
T Consensus 202 a~cGvvGlKPT~G~vs~~G~~p~~~-----s~d~~Gp~arsv~D~a~~~~~l~g~d-~~d~~~~~~~~~~~~~~~~~~~~ 275 (491)
T PRK06828 202 VQNSVVGIKPTVGLISRRGIIPFTY-----SQDTAGPFARTVTDAAILLGSLTGVD-EKDVVTHKSEGIAEHDYTKYLDA 275 (491)
T ss_pred hhcCceeecCCCCCccCCCCCCCcc-----CCCeeccccCCHHHHHHHHHHHhCCC-ccCccccccCcCCCCchhhhhcc
Confidence 9999999999999999999999998 99999999999999999999999863 22222110 00
Q ss_pred cccCCcEEEEECCCCCCcCCCCCCHHHHHHHHHHHHHHHhcCCcEEEE-ecC
Q psy15831 220 VIVQDIKVFYMEDDGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQK-VNI 270 (304)
Q Consensus 220 ~~~~~lrig~~~~~g~~~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~-~~~ 270 (304)
...+++|||++.++-. .+...+++++++++++++.|+++ |++|++ +++
T Consensus 276 ~~~~~lrigv~~~~~~--~~~~~~~~v~~a~~~a~~~L~~~-G~~v~~~~~~ 324 (491)
T PRK06828 276 NGLNGAKIGVYNNAPK--EYYESGEYDEKLFKETIEVLRSE-GATVVEDIDI 324 (491)
T ss_pred ccCCCCEEEEEcCccc--cccCCCHHHHHHHHHHHHHHHhc-CCEEEecccC
Confidence 1357899999754100 12258999999999999999995 999988 654
No 25
>PRK11910 amidase; Provisional
Probab=100.00 E-value=7e-66 Score=512.49 Aligned_cols=247 Identities=26% Similarity=0.390 Sum_probs=220.8
Q ss_pred eeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCCCcchHHHHHHH
Q psy15831 2 LNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLLR 81 (304)
Q Consensus 2 lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L~ 81 (304)
+||+++.+.+ |+++|+++|+.+..+ ++|||||||+|||+|+++|++||+||.++.++++.+||++|++||
T Consensus 202 LnA~i~~~~~-Al~~A~~lD~~~~~~---------~gPL~GIPv~VKDni~t~G~pTTaGS~al~~~~p~~DA~vV~rLr 271 (615)
T PRK11910 202 LNAITEINPT-IIAEAEQLDKENTTN---------KSALYGMPVLLKDNIGTKELPTSAGTVALKDWVIGKDATIVENLK 271 (615)
T ss_pred eeEEEEcCHH-HHHHHHHHHHHhccC---------CCCcCCCEEEEEcCcccCCCccCcccHhhcCCCCCCCHHHHHHHH
Confidence 8999999886 899999999875543 389999999999999999999999999999999999999999999
Q ss_pred HcCCeEEEEcCcCccccc-----cCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccC
Q psy15831 82 QAGAIILCVTNTPELCMN-----WETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTG 156 (304)
Q Consensus 82 ~aGai~igkt~~~e~~~~-----~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~G 156 (304)
+||||++|||||+||+++ ..++|.+||+|+|||++.|+|||||||||++||+|++++++|||||||||+||+|||
T Consensus 272 ~AGAIIlGKTNm~EfA~~~~~~~~~g~s~~~G~t~NP~~~~r~pGGSSsGSAAAVAaG~a~~AiGTDTgGSIR~PAa~cG 351 (615)
T PRK11910 272 ANGALILGKTNMSEWAAGMDEDLPNGYSGKKGQSKNPYSSNLDPSGSSSGSATAATSDFAAIAIGTETNGSIITPASAQS 351 (615)
T ss_pred HCCCEEEEEeCcchhhhCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCchHHHHHhcCCceEEeecCCCCccccchHHcC
Confidence 999999999999999976 346788999999999999999999999999999999999999999999999999999
Q ss_pred ceeeccCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccCCccccCCcEEEEECCCCCC
Q psy15831 157 VFGHKPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEPVIVQDIKVFYMEDDGSC 236 (304)
Q Consensus 157 v~glkPT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~~~~~~~~lrig~~~~~g~~ 236 (304)
|||||||+|++|+.|++|.++ ++|++|||+|+|+|+++++++|.+. +..++++. ..++++|||++.+
T Consensus 352 vVGlKPT~G~vSr~GviPls~-----slDtvGPmaRsV~D~a~ll~vi~g~-~~~~~l~~---~~lkglRIGv~~~---- 418 (615)
T PRK11910 352 AVGYKPSQGLVNNKGIIPLSS-----RFDTPGPLTRTVNDAYLTTNALTNT-TSNPPLST---DALKGKRIGLLAD---- 418 (615)
T ss_pred ceeEecCCCCCCCCCCcCCcC-----CCCeeccccCCHHHHHHHHHHhcCC-CCcCccCc---ccCCCCEEEEECC----
Confidence 999999999999999999998 9999999999999999999999985 32223322 2468899999864
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHhcCCcEEEE-ecC-ChHHHH
Q psy15831 237 TLTDGVDLDIKEGIRKAVHHLEYKQGIKAQK-VNI-DLEDVF 276 (304)
Q Consensus 237 ~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~-~~~-~~~~~~ 276 (304)
..++++.++++++++.|+++ |++|++ +++ .++...
T Consensus 419 ----~~~~~v~~a~~~a~~~L~~~-Ga~Vve~~~~p~~~~~~ 455 (615)
T PRK11910 419 ----GESNEETAVIKKIKLDLQKA-GATIIEGIAVGEFEQKD 455 (615)
T ss_pred ----CCCHHHHHHHHHHHHHHHHC-CCEEEeCCCCccHHHHH
Confidence 14789999999999999995 999998 444 444433
No 26
>PRK06707 amidase; Provisional
Probab=100.00 E-value=1.9e-64 Score=500.74 Aligned_cols=246 Identities=27% Similarity=0.367 Sum_probs=219.0
Q ss_pred eeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCC-CCccCCCCCCCCCCCCCCcchHHHHHH
Q psy15831 2 LNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAV-KGCSNNAGRIKPKERIATDDAETVRLL 80 (304)
Q Consensus 2 lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v-~g~~tt~Gs~~~~~~~~~~da~~V~~L 80 (304)
+||+++...+ |+++|+++|++++++. .+|||||||+|||||++ +|++||+||.++.++++.+|+++|++|
T Consensus 108 lna~~~~~~~-al~~A~~~d~~~~~~~--------~~pL~GiPi~vKD~i~~~~g~~TtaGs~~l~~~~~~~DA~vV~rL 178 (536)
T PRK06707 108 LNSVTEINPN-AMEEARKLDQERSRNK--------KSNLYGIPVVVKDNVQTAKVMPTSAGTYVLKDWIADQDATIVKQL 178 (536)
T ss_pred eEEEEECCHH-HHHHHHHHHHHHhcCC--------CCCcCCCeEEEecccccCCCCccCcccHhhccCCCCCChHHHHHH
Confidence 7999998876 9999999998877663 38999999999999999 999999999999999999999999999
Q ss_pred HHcCCeEEEEcCcCccccc-----cCCCCCCCCCCCCCCCC-CCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccc
Q psy15831 81 RQAGAIILCVTNTPELCMN-----WETFNKATGTTNNPYDT-RRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMF 154 (304)
Q Consensus 81 ~~aGai~igkt~~~e~~~~-----~~~~n~~~G~t~NP~~~-~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~ 154 (304)
+++|||++|||||+||++. ..++|+.||+|+||||+ .++|||||||||++||+|++++++|||||||||+||++
T Consensus 179 r~AGAiilGKtnm~E~a~~~~~~~~~g~s~~~G~t~NP~~~~~~~pGGSSsGSAaAVAag~~~~aiGtDtgGSIr~PAs~ 258 (536)
T PRK06707 179 KEEGAFVLGKANMSEWANYLSFTMPSGYSGKKGQNLNPYGPIKFDTSGSSSGSATVVAADFAPLAVGTETTGSIVAPAAQ 258 (536)
T ss_pred HHCCCEEEEecCchhhhccCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCchHHHHHhCCCCceEEecCCCCcccccHHH
Confidence 9999999999999999952 46788899999999998 68999999999999999999999999999999999999
Q ss_pred cCceeeccCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccC----------Cc---cc
Q psy15831 155 TGVFGHKPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLL----------EP---VI 221 (304)
Q Consensus 155 ~Gv~glkPT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~----------~~---~~ 221 (304)
||+||||||+|++|+.|++|.++ ++|++|||+|+|+|+++++++|.+.| ..++.+.. .. ..
T Consensus 259 ~GvvGlKPT~G~vs~~Gv~p~s~-----slDt~Gp~artV~D~a~~l~~~~g~d-~~d~~~~~~~~~~~~~~~~~l~~~~ 332 (536)
T PRK06707 259 QSVVGLRPSLGMVSRTGIIPLAE-----TLDTAGPMARTVKDAATLFNAMIGYD-EKDVMTEKVKDKERIDYTKDLSIDG 332 (536)
T ss_pred cCeEEEeCCCCcccCCCCcCccc-----ccCeecCeeCCHHHHHHHHHHHcCCC-CCccccccccccCCcchhhhccccC
Confidence 99999999999999999999998 99999999999999999999999963 22222111 11 13
Q ss_pred cCCcEEEEECCCCCCcCCCCCCHHHHHH-HHHHHHHHHhcCCcEEEE-ecC
Q psy15831 222 VQDIKVFYMEDDGSCTLTDGVDLDIKEG-IRKAVHHLEYKQGIKAQK-VNI 270 (304)
Q Consensus 222 ~~~lrig~~~~~g~~~~~~~~~~~v~~a-~~~a~~~L~~~lG~~v~~-~~~ 270 (304)
++++|||++.+. ..+++++++ ++++++.|++ +|++|++ +++
T Consensus 333 l~~~rigv~~~~-------~~~~~~~~a~~~~a~~~L~~-~Ga~iv~~~~l 375 (536)
T PRK06707 333 LKGKKIGLLFSV-------DQQDENRKAVAEKIRKDLQD-AGAILTDYIQL 375 (536)
T ss_pred CCCCEEEEECCc-------CCCHHHHHHHHHHHHHHHHH-cCCEEEeccCC
Confidence 678999998752 257888888 5999999999 5999998 765
No 27
>PRK07139 amidase; Provisional
Probab=100.00 E-value=2.3e-64 Score=491.62 Aligned_cols=246 Identities=24% Similarity=0.320 Sum_probs=211.6
Q ss_pred CHHHHHHHHHHHhH-HHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCCCcchHHHHHHHHcCCeE
Q psy15831 9 RFNLALEEAKQVDI-LLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLLRQAGAII 87 (304)
Q Consensus 9 ~~~~al~~A~~~d~-~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L~~aGai~ 87 (304)
.|+++|+++++.+. -+..... +.....+||+||||+|||+|+++|++||+||..++++++.+|+++|++|++||||+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gpL~GvPvavKD~~~v~G~~tt~Gs~~l~~~~~~~dA~vV~rLr~AGAIi 84 (439)
T PRK07139 7 NFQKALEELKNDKNNAVSYVFD--EKNNKDGPLANCVFTIKDNFATSEGPTHASSKSLENFKPSYNATVVQKLINAGAKP 84 (439)
T ss_pred hHHHHHHHhhccccCeEEEEec--ccCCCCCCcCCcEEEEEcceecCCCccCcChHHHccCCCCCchHHHHHHHHCCCEE
Confidence 46888888877431 0000000 01123589999999999999999999999999999999999999999999999999
Q ss_pred EEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCceeeccCCCCC
Q psy15831 88 LCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGHKPSPGFV 167 (304)
Q Consensus 88 igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~glkPT~g~v 167 (304)
+||||||||+++.++.|++||+|+||||+.|+|||||||||++||++ +++++|||+|||||+||+|||+||||||+|+|
T Consensus 85 lGKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~pGGSSgGSAAaVAag-~~~alGtDtgGSIRiPAa~cGvvGlKPT~G~v 163 (439)
T PRK07139 85 VAKVHCDELGLGGTGLFSAFGLIKNPLDSSKLVGGSSSGSAATFNKN-ISFAIGSDTGDSVRLPASFIGKVGFKPSYGAI 163 (439)
T ss_pred EEeechhhHhcCCCCCCCCCCCcCCCCCCCCCCCCCchHHHHHHHCC-CCEEEEcCCCcchhhhHHHcCeEEEeCCCCCc
Confidence 99999999999999999999999999999999999999999999987 69999999999999999999999999999999
Q ss_pred CCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccCCc----cccCCcEEEEECCCCCCcCCCCCC
Q psy15831 168 SNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEP----VIVQDIKVFYMEDDGSCTLTDGVD 243 (304)
Q Consensus 168 s~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~~~----~~~~~lrig~~~~~g~~~~~~~~~ 243 (304)
|+.|++|.++ ++|++|||+|+|+|+++++++|.+. +..++.+...+ ...+++||+|+.. ...++
T Consensus 164 s~~G~~p~~~-----sld~~Gp~arsv~D~a~~~~vl~g~-d~~d~~~~~~~~~~~~~~~~lrig~~~~------~~~~~ 231 (439)
T PRK07139 164 SRYGLFAYAS-----SLDTVAYFTHNVNDAIILSKVLFGK-DENDLTSVDVKINNVKKTKPKKVAYLDC------FKELE 231 (439)
T ss_pred CCCCcccCcc-----cCCccccccCCHHHHHHHHHHHcCC-CcCCccccccCcccccccCCCEEEEECc------cccCC
Confidence 9999999887 9999999999999999999999986 33333322111 1347799999753 23579
Q ss_pred HHHHHHHHHHHHHHHhcCCcEEEEecC
Q psy15831 244 LDIKEGIRKAVHHLEYKQGIKAQKVNI 270 (304)
Q Consensus 244 ~~v~~a~~~a~~~L~~~lG~~v~~~~~ 270 (304)
++++++++++++.|++ +|++|+++++
T Consensus 232 ~~v~~a~~~a~~~L~~-~G~~v~~~~~ 257 (439)
T PRK07139 232 EYVAKKYKKLINILKS-ENIEVEKIKI 257 (439)
T ss_pred HHHHHHHHHHHHHHHH-CCCEEEEeCC
Confidence 9999999999999999 5999999876
No 28
>PRK06565 amidase; Validated
Probab=100.00 E-value=4e-64 Score=496.50 Aligned_cols=254 Identities=28% Similarity=0.303 Sum_probs=220.8
Q ss_pred eeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCCCcchHHHHHHH
Q psy15831 2 LNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLLR 81 (304)
Q Consensus 2 lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L~ 81 (304)
+||++....+ |+++|+++|+++++++ .++||+||||+|||+|+++|++||+||.++.++++.+|+++|++|+
T Consensus 46 lna~~~~~~~-Al~~A~~~D~~~~~g~-------~~gpL~GIPi~vKD~~~v~G~~TT~Gs~~l~~~~~~~DA~vV~rLr 117 (566)
T PRK06565 46 LNAVVVRNPD-ALKEAEASDARRARGE-------TLGPLDGIPYTAKDSYLVKGLTAASGSPAFKDLVAQRDAFTIERLR 117 (566)
T ss_pred eEEEEecCHH-HHHHHHHHHHHHhcCC-------CCCCCCCCEEEEecccccCCCCcccccHhhcCCCCCCCHHHHHHHH
Confidence 7999986665 9999999999988875 2589999999999999999999999999999999999999999999
Q ss_pred HcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCC----CCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCc
Q psy15831 82 QAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRR----TPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGV 157 (304)
Q Consensus 82 ~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~----~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv 157 (304)
+||||++||||||||+++..+ |++||+++||||+.+ ++||||||||++||++++++++|||||||||+||+||||
T Consensus 118 ~AGAIilGKTnm~E~a~g~~~-~~~~G~t~NP~n~~~~~~~~pGGSSgGsAaAVAag~~~~alGtDtgGSIR~PAa~~Gi 196 (566)
T PRK06565 118 AAGAICLGKTNMPPMANGGMQ-RGVYGRAESPYNAAYLTAPFASGSSNGAGTATAASFSAFGLAEETWSSGRGPASNNGL 196 (566)
T ss_pred HCCCEEEEecccchhhhCCCC-CCCCCCcCCCcCcccCcCCCCCCCCccHHHHHhCCCCcceeecCCCCchhhhHHHcCe
Confidence 999999999999999998765 779999999999999 599999999999999999999999999999999999999
Q ss_pred eeeccCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCcccc-c---------c---------ccCC
Q psy15831 158 FGHKPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAK-S---------L---------RLLE 218 (304)
Q Consensus 158 ~glkPT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~-~---------~---------~~~~ 218 (304)
||||||+|++|+.|++|.++ ++|++|||+|+|+|+++++++|.+.|+... + + .+..
T Consensus 197 vG~KPT~G~vs~~Gv~p~~~-----s~D~vGp~aRsV~D~a~~l~vl~g~D~~d~~~~~~~~~~~~~p~~~~~~~~~y~~ 271 (566)
T PRK06565 197 CAYTPSRGVISVRGNWPLTP-----TMDVVVPYARTMADLLEVLDVIVADDPDTRGDLWRLQPWVPIPKASEVRPASYLA 271 (566)
T ss_pred eEEeCCCCccCCCCcccccC-----CCCeecceeCCHHHHHHHHHHhcCCCcccccchhhccccccCccccccCccchhh
Confidence 99999999999999999998 999999999999999999999999632110 0 0 0100
Q ss_pred ----ccccCCcEEEEECCCC-CC--------c-------CCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC
Q psy15831 219 ----PVIVQDIKVFYMEDDG-SC--------T-------LTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI 270 (304)
Q Consensus 219 ----~~~~~~lrig~~~~~g-~~--------~-------~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~ 270 (304)
...++++|||++...- .. + ....++++++++|+++++.|++ +|++|+++++
T Consensus 272 ~~~~~~~l~g~RIGv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~a~~~L~~-~Ga~vv~v~~ 342 (566)
T PRK06565 272 LAAGADALKGKRFGVPRMYINADPDAGTSENPGIGGPTGQRIHTRPSVIDLWEAARRALEA-AGAEVIEVDF 342 (566)
T ss_pred hhccccCCCCCEEEEEChhhccccccccccccccccccccccCCCHHHHHHHHHHHHHHHH-CCCEEEEeec
Confidence 1235789999986420 00 0 0012578999999999999999 5999998876
No 29
>PRK08310 amidase; Provisional
Probab=100.00 E-value=3e-62 Score=471.17 Aligned_cols=215 Identities=29% Similarity=0.415 Sum_probs=194.6
Q ss_pred CCCCcccceEEeecCCCCCCccCCCCCCCCC--CCCCCcchHHHHHHHHcCCeEEEEcCcCccccccCCCCCCCCCCCCC
Q psy15831 36 RDTPLLGVPLTVKESVAVKGCSNNAGRIKPK--ERIATDDAETVRLLRQAGAIILCVTNTPELCMNWETFNKATGTTNNP 113 (304)
Q Consensus 36 ~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~--~~~~~~da~~V~~L~~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP 113 (304)
..+||+||||+|||+|+++|++||+||..+. ..++++|+++|++|+++|||++||||||||+++.++.|+.||+|+||
T Consensus 22 ~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~~~dA~vV~~L~~aGAii~GKTn~~E~~~~~~~~n~~~G~t~NP 101 (395)
T PRK08310 22 ASGPLAGLRFAVKDVFDVAGYVTGCGNPDWLAESPVATRTAPAVEKLLAAGARFVGKTQTDELAFSLNGQNAHYGTPVNP 101 (395)
T ss_pred CCCCcCCCeEEEeeccccCCCccCCCCHHHHhcCCCCCCCHHHHHHHHHCCCEEEEeccchHHhcCCCCCCCCCCCCCCC
Confidence 3589999999999999999999999999884 46778999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCceeeccCCCCCCCCCCCCCCCccCCCCceeeccccCC
Q psy15831 114 YDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGHKPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARY 193 (304)
Q Consensus 114 ~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~glkPT~g~vs~~G~~p~~~~~~~~~~~~~G~~ars 193 (304)
||+.|++||||||||++||+|++++++|||+|||||+||+||||||||||+|++|+.|+.|.++ ++|++|||+|+
T Consensus 102 ~~~~~~pGGSSgGsAaaVAag~~~~aiGtDtGGSIRiPAa~cGv~G~KPT~Grvs~~G~~~~~~-----~~d~~Gp~ars 176 (395)
T PRK08310 102 AAPDRVPGGSSSGSAAAVAGGLADFALGTDTGGSVRAPASFCGLYGLRPTHGRISLEGVMPLAP-----SFDTVGWFARD 176 (395)
T ss_pred CCCCCCCCCCchHHHHHHHcCCcceEEecCCCCCeecchHhcCeeEeecCCCcccCCCCccccc-----CCCeeeeeeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999887 89999999999
Q ss_pred cchHHHHHHHHcCCCccccccccCCccccCCcEEEEECCCCCCcCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC
Q psy15831 194 AEDLPLVLHLMISDREQAKSLRLLEPVIVQDIKVFYMEDDGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI 270 (304)
Q Consensus 194 v~Dl~~~~~~l~~~~~~~~~~~~~~~~~~~~lrig~~~~~g~~~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~ 270 (304)
|+|+++++++|.+.|+ .+ . ...+||++..+. +..++++++++++++++.|+++.| +|++++.
T Consensus 177 v~D~~~~~~~l~g~~~-~~-~-------~~~~ri~~~~~~-----~~~~~~~v~~a~~~a~~~L~~~~g-~vv~~~~ 238 (395)
T PRK08310 177 IALLERVGEVLLGDDA-QE-F-------PLTQRLLIPVDL-----FALLDPAVRAALEAALARLRPHLG-PAKPASV 238 (395)
T ss_pred HHHHHHHHHHHcCCCc-cc-C-------CcCceEEEeccc-----cccCCHHHHHHHHHHHHHHHHhCC-ceeeecC
Confidence 9999999999998522 11 1 124689987652 346899999999999999998435 7878763
No 30
>PLN02722 indole-3-acetamide amidohydrolase
Probab=100.00 E-value=2.2e-61 Score=468.11 Aligned_cols=215 Identities=29% Similarity=0.411 Sum_probs=194.8
Q ss_pred CCCcccceEEeecCCCCCCccCCCCCCCCCC-C-CCCcchHHHHHHHHcCCeEEEEcCcCccccccCCCCCCCCCCCCCC
Q psy15831 37 DTPLLGVPLTVKESVAVKGCSNNAGRIKPKE-R-IATDDAETVRLLRQAGAIILCVTNTPELCMNWETFNKATGTTNNPY 114 (304)
Q Consensus 37 ~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~-~-~~~~da~~V~~L~~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~ 114 (304)
.+||+||||+|||+|+++|++||+||+.+.+ + ++.+|+++|+||++||||++|||||+||+++..+.|++||+|+|||
T Consensus 24 ~gpL~GvPiaVKD~~~v~G~~Tt~GS~~~~~~~~~~~~dA~vV~rL~~AGAiilGKTn~~Efa~~~~g~n~~~G~t~NP~ 103 (422)
T PLN02722 24 DLPLHGLTFAVKDIFDVEGYVTGFGNPDWARTHSAATSTAPAVLAVLRGGATCVGKTIMDEMAYSINGENAHYGTPTNPI 103 (422)
T ss_pred CCCCCCCeEEEEcccccCCCccCCCCHHHHhcCCCCCCChHHHHHHHHCCCEEEEEechhhHhhCCCCCCCCCCCCCCCC
Confidence 5899999999999999999999999998764 4 4678999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCceeeccCCCCCCCCCCCCCCCccCCCCceeeccccCCc
Q psy15831 115 DTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGHKPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYA 194 (304)
Q Consensus 115 ~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~glkPT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv 194 (304)
|+.|+|||||||||++||+|++|+++|||+|||||+||+|||+||||||+|+||+.|++|+++ ++|++|||+|+|
T Consensus 104 ~~~r~pGGSSsGSAaAVAaG~~p~AlGtDtgGSIRiPAa~cGvvG~KPT~G~vp~~G~~pla~-----sld~~G~~ar~v 178 (422)
T PLN02722 104 APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTVGVIPMAQ-----SFDTVGWFARDP 178 (422)
T ss_pred CCCCCCCcCcHHHHHHHHcCCCceEeecCCCcccccChhHcceEEEecCCCccCCCCCCcccC-----CCCcccceeCCH
Confidence 999999999999999999999999999999999999999999999999999999999999998 999999999999
Q ss_pred chHHHHHHHHcCCCccccccccCCccccCCcEEEEECCCCCCcCC--CCCCHHHHHHHHHHHHHHHhcCCcEEEEecC
Q psy15831 195 EDLPLVLHLMISDREQAKSLRLLEPVIVQDIKVFYMEDDGSCTLT--DGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI 270 (304)
Q Consensus 195 ~Dl~~~~~~l~~~~~~~~~~~~~~~~~~~~lrig~~~~~g~~~~~--~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~ 270 (304)
+|+++++++|.+. +..++ ...+||+++.+. +. ...++++.++++++++.|++ .|++|+++++
T Consensus 179 ~D~a~~~~~l~g~-~~~d~--------~~~~ri~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~-~g~~v~~~~~ 242 (422)
T PLN02722 179 VILKRVGHVLLQQ-PDVNP--------IKPSQIIIAEDC----FQLSSIPHDRLVQVLVKSVEKLFG-GGDIVKHVNL 242 (422)
T ss_pred HHHHHHHHHHcCC-CCCCC--------cCCceEEechhh----hhhcccccHHHHHHHHHHHHHHhc-CCCeeeecch
Confidence 9999999999985 22111 235799988652 21 23468899999999999999 4999988754
No 31
>KOG1211|consensus
Probab=100.00 E-value=1.4e-59 Score=453.53 Aligned_cols=275 Identities=30% Similarity=0.394 Sum_probs=242.2
Q ss_pred eeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccC-CCCCCCCCCCCCCcchHHHHHH
Q psy15831 2 LNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSN-NAGRIKPKERIATDDAETVRLL 80 (304)
Q Consensus 2 lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~t-t~Gs~~~~~~~~~~da~~V~~L 80 (304)
+|+.+....++++.+|++.|++++++. ..+||+|+||+|||+|+++|++| ||+|++++++.+++||++|++|
T Consensus 51 ~~~~i~~~~~~~~~~a~~~~~~~~~~~-------~~~~L~Gv~i~IKDnf~tk~~~t~t~~S~~l~~~~~p~dAtVV~~L 123 (506)
T KOG1211|consen 51 LNAKITVINEEALKQAEEVTRRRKNGM-------EKGPLQGVPIAIKDNFDTKDKPTTTAASWMLEHYNPPKDATVVKKL 123 (506)
T ss_pred ccceeeeccHHHHHHhhhccccccCCC-------cCCCcCCceEEEeeceecCCccCCchhhhhhccCCCccccHHHHHH
Confidence 456666677899999999999877765 36899999999999999999999 9999999999999999999999
Q ss_pred HHcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCceee
Q psy15831 81 RQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGH 160 (304)
Q Consensus 81 ~~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~gl 160 (304)
+++|||++|||||+||+|+..+++.+||+|+|||++.+.+||||||||++||++++++++|||||||+|+||++|||+||
T Consensus 124 ~~aGaiilGKTnmdEfamg~~~~~s~~G~t~np~~~~~v~GGSS~GSA~aVaa~l~~~alGtDTgGSvR~PAa~~gvvG~ 203 (506)
T KOG1211|consen 124 REAGAIILGKTNMDEFAMGSSGENSHYGTTRNPLSLWRVPGGSSSGSAAAVAAGLCDFALGTDTGGSVRVPAAYCGVVGF 203 (506)
T ss_pred hhcCceEEccccHHHHhhccccccccCCccCCCCcccccCCCCcchhHHHHHhccchhhccccCCCCccCcHHhcCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccCCcc------------ccCCcEEE
Q psy15831 161 KPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEPV------------IVQDIKVF 228 (304)
Q Consensus 161 kPT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~~~~------------~~~~lrig 228 (304)
|||+|++|+.|++|++. ++|++|++||+|.|+..+++++.+. +..+..+...+. +.+.+|+|
T Consensus 204 KPT~G~~Sr~Gvip~~~-----SlD~vGi~a~tv~D~~~v~~~~~g~-d~~d~~t~~~p~~~~~~~~~~~~~~l~~~r~G 277 (506)
T KOG1211|consen 204 KPTYGRVSRFGVIPLSN-----SLDTVGIFARTVYDAVEVLGAIVGI-DELDSTTLAQPAPFPIVLELIGSMDLSGLRIG 277 (506)
T ss_pred ccCcceecccccchhhh-----cccccchhhcccchhHHHhhhhcCC-CccCcccccCCcccccchhhcccccccccccC
Confidence 99999999999999998 9999999999999999999999997 444433322221 56789999
Q ss_pred EECCCCCCcCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC-ChHHHHH--------HHHHHHhcccCcccccc
Q psy15831 229 YMEDDGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI-DLEDVFE--------LVSMVLLKMNGINCPYQ 294 (304)
Q Consensus 229 ~~~~~g~~~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~-~~~~~~~--------~~~~~~~~~~g~~~~~~ 294 (304)
++.+. .+...+..+.+.+++.++.|+. +|+.+.++++ ....... ...+++++++++.+..+
T Consensus 278 Ip~~~----~~~~~~~~v~~~~~~~~~~l~~-~~~~~~~~~lp~~~~~~~~~~~~s~~ea~s~laryd~~~~~~r 347 (506)
T KOG1211|consen 278 IPKER----LVQGLSSGVLSLWEELADLLGS-LGAKVNEVSLPTTINGLCGYSLSSASEAASNLARYDGILYGHR 347 (506)
T ss_pred ceeec----ccccccHHHHHHHHHHHHHhhc-ccccceeeecchhhhccccccccchhhhhhhHHHHHHHHhhcc
Confidence 99874 3556778999999999999999 5999999886 3322222 22477888999888876
No 32
>KOG1212|consensus
Probab=100.00 E-value=1e-56 Score=437.28 Aligned_cols=285 Identities=39% Similarity=0.585 Sum_probs=249.4
Q ss_pred CeeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCCCcchHHHHHH
Q psy15831 1 MLNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLL 80 (304)
Q Consensus 1 ~lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L 80 (304)
.+||+++..+|+++.+|++.|..+.... ..+||+||||+|||+|.+||+.+|.|.....+.++++|+.+|+.|
T Consensus 88 ~lNcV~~~i~e~~~~~a~~~d~~~~~~~-------~k~PL~GvP~SvKe~~~vkg~d~T~G~~~~~~~~a~~ds~~V~~l 160 (560)
T KOG1212|consen 88 KLNCVVEFIFEAALQAAALDDEYTAPLY-------EKPPLYGVPFSVKESISVKGYDSTAGLLARTNQPATTDSVIVEFL 160 (560)
T ss_pred CcceeeeehhhHHHHHhhchhhhhchhc-------ccCCceecceehhhheeecCccccchhhhccCCCCccchHHHHHH
Confidence 3799999999999999988887655331 358999999999999999999999999999999999999999999
Q ss_pred HHcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCceee
Q psy15831 81 RQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGH 160 (304)
Q Consensus 81 ~~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~gl 160 (304)
+++|||++.+||+||.+|+.++.|+.||+|.||||..++|||||||+|+++++|.++||||||.|||||+||+|||++|+
T Consensus 161 k~~GaIpf~~TnvPq~~ls~~tsn~v~G~T~NP~d~~rt~GGSSGGEaALigaggS~lGiGsDigGSiRiPa~f~Gl~Gl 240 (560)
T KOG1212|consen 161 KKLGAIPFVLTNVPQSLLSYETSNPVYGTTKNPYDLSRTPGGSSGGEAALLGAGGSLLGIGSDIGGSIRIPAAFCGLFGL 240 (560)
T ss_pred HHcCCCceeecCCchhhhhhhhcCCCCCCCCChhhccCCCCCCchHHHHHHhCCcceeccccccCCceeechhhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCcccc--------ccccCCc--cccCCcEEEEE
Q psy15831 161 KPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAK--------SLRLLEP--VIVQDIKVFYM 230 (304)
Q Consensus 161 kPT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~--------~~~~~~~--~~~~~lrig~~ 230 (304)
|||.+|+|..|+.+..+ +.+..+.++|||+|+++|+..+++++.+. ... ++++.+. .+.++++|+|.
T Consensus 241 KPT~~r~~~~G~~~~~~-g~~~~~~~~GPm~r~v~dl~~~L~~~i~~--~~~~~~~p~~~p~~~~~~~y~~~~~~~ig~~ 317 (560)
T KOG1212|consen 241 KPTPGRVSVKGHHPSVP-GRETIMLVIGPMTRDVEDLVLLLRLMIGD--SGPKLLDPYPVPVKFMEVFYKSSDKLVIGYY 317 (560)
T ss_pred CCCCCeeeecCcCCCCC-cccccccccCcccccHHHHHHHHHHhcCC--ccccccCCCCCCchhhhhhhhccCCccceEE
Confidence 99999999999999886 77888999999999999999999999994 211 1222221 13567999999
Q ss_pred CCCCCCcCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC-ChHHHHHHHHHHHhc--ccCccccccccCCCCC
Q psy15831 231 EDDGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI-DLEDVFELVSMVLLK--MNGINCPYQEDDEHPE 301 (304)
Q Consensus 231 ~~~g~~~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~-~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~ 301 (304)
.+|| +.++.|.+++|++++++.|++. ||+++++.+ ++++..++|.. +.. .+.+...+.+++.++.
T Consensus 318 ~~dg----~~~~~pa~~RAv~~~~~~l~~~-g~~~~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 385 (560)
T KOG1212|consen 318 VDDG----FFDPSPAMQRAVQETIDLLEKA-GHEVVPFDLPDLKHVADMFFR-VMPDDGDYISEMYLLDIGDPT 385 (560)
T ss_pred ecCC----CCCcCHHHHHHHHHHHHHHHhc-CcceeEecCCcchHHHHHHHH-HcccccchhhHHhhcccCccc
Confidence 8876 6789999999999999999995 999999999 88999999977 322 3334444555544443
No 33
>PRK15468 carboxysome structural protein EutS; Provisional
Probab=54.38 E-value=31 Score=27.29 Aligned_cols=70 Identities=10% Similarity=0.128 Sum_probs=47.1
Q ss_pred eeeccccCCcchHHHHHHHHcCCCccccccccCCccccCCcEEEEECCCCCCcCCCCCCHHHHHHHHHHHHHHHhcCCcE
Q psy15831 185 FTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEPVIVQDIKVFYMEDDGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIK 264 (304)
Q Consensus 185 ~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~~~~~~~~lrig~~~~~g~~~~~~~~~~~v~~a~~~a~~~L~~~lG~~ 264 (304)
+.+|.|+-+....+.+..-++. ......|||.+.+.++.....--.+|..|++++++.|++.||..
T Consensus 39 ~AIGIlTiTP~E~aIIAaDIA~--------------Kaa~V~igF~DRFsGslvitGdvs~Ve~Al~~V~~~l~~~L~F~ 104 (111)
T PRK15468 39 GAIGIMTLTPGETAMIAGDLAL--------------KAADVHIGFLDRFSGALVIYGSVGAVEEALSQTVSGLGRLLNYT 104 (111)
T ss_pred CceEEEEeCcchHHHHHHHhhh--------------hccCcEEeeeeccceeEEEEccHHHHHHHHHHHHHHHHhhcCcc
Confidence 4677777777666665544433 12456799887654332222334789999999999999988988
Q ss_pred EEEe
Q psy15831 265 AQKV 268 (304)
Q Consensus 265 v~~~ 268 (304)
+.++
T Consensus 105 ~~~i 108 (111)
T PRK15468 105 LCEM 108 (111)
T ss_pred cccc
Confidence 7655
No 34
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism]
Probab=37.28 E-value=1.1e+02 Score=30.45 Aligned_cols=36 Identities=8% Similarity=0.013 Sum_probs=27.0
Q ss_pred CCcEEEEECCCCCCcCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC
Q psy15831 223 QDIKVFYMEDDGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI 270 (304)
Q Consensus 223 ~~lrig~~~~~g~~~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~ 270 (304)
...||++-.|.-++++. ++-++.|++ +|++|+.+++
T Consensus 244 ~~~rIAVA~D~AF~FyY-----------~~nl~~Lr~-~GAelv~FSP 279 (451)
T COG1797 244 LGVRIAVARDAAFNFYY-----------PENLELLRE-AGAELVFFSP 279 (451)
T ss_pred cCceEEEEecchhcccc-----------HHHHHHHHH-CCCEEEEeCC
Confidence 44899998775433332 457889999 5999999987
No 35
>KOG1212|consensus
Probab=34.80 E-value=15 Score=37.39 Aligned_cols=108 Identities=7% Similarity=-0.129 Sum_probs=74.3
Q ss_pred CCCCCCCCCCcchHHHHHHHHcCCeEEEEcCcCcccccc-CCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeE
Q psy15831 62 RIKPKERIATDDAETVRLLRQAGAIILCVTNTPELCMNW-ETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGV 140 (304)
Q Consensus 62 s~~~~~~~~~~da~~V~~L~~aGai~igkt~~~e~~~~~-~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~al 140 (304)
.+.-....+.-+|.-...|+.+|+.++|-++-- +-+. ...+-.+....+|...+.+..|++++.. +...+.+.+
T Consensus 192 NP~d~~rt~GGSSGGEaALigaggS~lGiGsDi--gGSiRiPa~f~Gl~GlKPT~~r~~~~G~~~~~~---g~~~~~~~~ 266 (560)
T KOG1212|consen 192 NPYDLSRTPGGSSGGEAALLGAGGSLLGIGSDI--GGSIRIPAAFCGLFGLKPTPGRVSVKGHHPSVP---GRETIMLVI 266 (560)
T ss_pred ChhhccCCCCCCchHHHHHHhCCcceecccccc--CCceeechhhccccccCCCCCeeeecCcCCCCC---ccccccccc
Confidence 333345677789999999999999999987753 2222 1223345556899999998888888866 444444444
Q ss_pred ec-cCCCcccccccccCceeeccCCCCCCCCCCCCC
Q psy15831 141 AS-DIAGSCRIPAMFTGVFGHKPSPGFVSNVGHMPS 175 (304)
Q Consensus 141 Gt-D~gGSiR~PAa~~Gv~glkPT~g~vs~~G~~p~ 175 (304)
|- +...+.+.+...|.+-.- +..+..|....+|.
T Consensus 267 GPm~r~v~dl~~~L~~~i~~~-~~~~~~p~~~p~~~ 301 (560)
T KOG1212|consen 267 GPMTRDVEDLVLLLRLMIGDS-GPKLLDPYPVPVKF 301 (560)
T ss_pred CcccccHHHHHHHHHHhcCCc-cccccCCCCCCchh
Confidence 44 667788899998888766 66666666554443
No 36
>COG3221 PhnD ABC-type phosphate/phosphonate transport system, periplasmic component [Inorganic ion transport and metabolism]
Probab=27.36 E-value=1.7e+02 Score=27.43 Aligned_cols=50 Identities=16% Similarity=0.150 Sum_probs=38.0
Q ss_pred cCCcEEEEECCCCCCcCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC-ChHHHHHHH
Q psy15831 222 VQDIKVFYMEDDGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI-DLEDVFELV 279 (304)
Q Consensus 222 ~~~lrig~~~~~g~~~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~-~~~~~~~~~ 279 (304)
.+.+|||+... .....+++.++-..+.|++++|.+|+.+-. +.....+.+
T Consensus 34 ~~~l~~gi~p~--------e~~~~~~~~~~pl~~~L~~~lG~~V~~~~a~dy~~vieal 84 (299)
T COG3221 34 PKELRVGIVPT--------ENPTNLIPAWAPLADYLEKELGIPVEFFVATDYAAVIEAL 84 (299)
T ss_pred CcceEEEEcCC--------CChHHHHHHHHHHHHHHHHHhCCceEEEecccHHHHHHHH
Confidence 56799998754 346789999999999999999999766544 555555544
No 37
>COG3603 Uncharacterized conserved protein [Function unknown]
Probab=22.89 E-value=59 Score=26.26 Aligned_cols=19 Identities=37% Similarity=0.449 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHhcCCcEEE
Q psy15831 247 KEGIRKAVHHLEYKQGIKAQ 266 (304)
Q Consensus 247 ~~a~~~a~~~L~~~lG~~v~ 266 (304)
.+.+++|+++|+++ ||+|.
T Consensus 109 ~~dLekAv~~L~ea-Ghev~ 127 (128)
T COG3603 109 EEDLEKAVKALEEA-GHEVL 127 (128)
T ss_pred hhhHHHHHHHHHHc-CCccc
Confidence 35678999999995 99984
No 38
>PF05221 AdoHcyase: S-adenosyl-L-homocysteine hydrolase; InterPro: IPR000043 Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase, 3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. This enzyme is ubiquitous, highly conserved, and may play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. AdoHcyase requires NAD+ as a cofactor and contains a central glycine-rich region which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity, 0006730 one-carbon metabolic process; PDB: 3N58_B 3H9U_C 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 1K0U_F 1B3R_A 1XWF_D ....
Probab=21.37 E-value=90 Score=28.82 Aligned_cols=37 Identities=19% Similarity=0.307 Sum_probs=27.7
Q ss_pred CCCCcccceEEeecCCCCCCccCCCCCCCCCCCCCCcchHHHHHHHHcCCeEEEE
Q psy15831 36 RDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLLRQAGAIILCV 90 (304)
Q Consensus 36 ~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L~~aGai~igk 90 (304)
...||.|+.|++ ++ ..-.+++.+++-|+++||.+.-.
T Consensus 37 ~~kPl~G~rIa~--cL----------------Hle~kTA~L~~tL~a~GAeV~~~ 73 (268)
T PF05221_consen 37 AEKPLKGARIAG--CL----------------HLEAKTAVLAETLKALGAEVRWT 73 (268)
T ss_dssp TT-TTTTEEEEE--ES------------------SHHHHHHHHHHHHTTEEEEEE
T ss_pred ccCCCCCCEEEE--EE----------------echHHHHHHHHHHHHcCCeEEEe
Confidence 458999999998 22 23567899999999999988643
No 39
>PF06591 Phage_T4_Ndd: T4-like phage nuclear disruption protein (Ndd); InterPro: IPR009514 This family consists of several nuclear disruption (Ndd) proteins from T4-like phages. Early in a Bacteriophage T4 infection, the phage ndd gene causes the rapid destruction of the structure of the Escherichia coli nucleoid. The targets of Ndd action may be the chromosomal sequences that determine the structure of the nucleoid [].
Probab=20.90 E-value=84 Score=26.24 Aligned_cols=25 Identities=20% Similarity=0.121 Sum_probs=21.3
Q ss_pred HHHHHHHcCCeEEEEcCcCcccccc
Q psy15831 76 TVRLLRQAGAIILCVTNTPELCMNW 100 (304)
Q Consensus 76 ~V~~L~~aGai~igkt~~~e~~~~~ 100 (304)
-++.|+.|||..||.....||..+.
T Consensus 5 t~~di~~agaq~ig~~~~G~f~~~~ 29 (152)
T PF06591_consen 5 TRKDILSAGAQRIGTFKNGEFFVGS 29 (152)
T ss_pred ehhhHhhcCCEEEEEEeCcEEEcCC
Confidence 3788999999999999999996553
Done!