BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy15834
MTQRSKVVELYKTVSMSLPDGDYQLGFPMSDMKTTAINQFLHNKILNFIVMTQQGLWVNS
FNSCNLPSTACCTILSTGASMVGKHWILGLLRYWENPTMLSTKVFLHLGKDYPKGFDYFR
LRLKNAFMKNAQVQDPEKIDQMIKHGEFVVKEIQALYMLKKYRTLKQRLVLIILM

High Scoring Gene Products

Symbol, full name Information P value
Lyrm5
LYR motif containing 5
protein from Mus musculus 7.2e-20
Lyrm5
LYR motif containing 5
gene from Rattus norvegicus 9.2e-20
LYRM5
LYR motif-containing protein 5
protein from Bos taurus 1.5e-19
LYRM5
Uncharacterized protein
protein from Gallus gallus 2.5e-19
LOC100517943
Uncharacterized protein
protein from Sus scrofa 2.5e-19
lyrm5b
LYR motif containing 5b
gene_product from Danio rerio 2.8e-18
lyrm5
LYR motif-containing protein 5
gene from Dictyostelium discoideum 1.4e-07

The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy15834
        (175 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

MGI|MGI:1914886 - symbol:Lyrm5 "LYR motif containing 5" s...   236  7.2e-20   1
RGD|2320673 - symbol:Lyrm5 "LYR motif containing 5" speci...   235  9.2e-20   1
UNIPROTKB|Q0VCR0 - symbol:LYRM5 "LYR motif-containing pro...   233  1.5e-19   1
UNIPROTKB|E1BTS3 - symbol:LYRM5 "Uncharacterized protein"...   231  2.5e-19   1
UNIPROTKB|F1SFJ7 - symbol:LYRM5 "Uncharacterized protein"...   231  2.5e-19   1
UNIPROTKB|J3KPI7 - symbol:LYRM5 "LYR motif-containing pro...   229  4.0e-19   1
ZFIN|ZDB-GENE-070424-20 - symbol:lyrm5b "LYR motif contai...   221  2.8e-18   1
DICTYBASE|DDB_G0284341 - symbol:lyrm5 "LYR motif-containi...   120  1.4e-07   1


>MGI|MGI:1914886 [details] [associations]
            symbol:Lyrm5 "LYR motif containing 5" species:10090 "Mus
            musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0008150 "biological_process"
            evidence=ND] MGI:MGI:1914886 Pfam:PF05347 GO:GO:0005739
            InterPro:IPR008011 eggNOG:NOG76571 GeneTree:ENSGT00390000001810
            HOGENOM:HOG000192356 OrthoDB:EOG4W9J5K CTD:144363
            HOVERGEN:HBG081943 OMA:GRGEFVM EMBL:AF412298 EMBL:AF412299
            EMBL:AF412300 EMBL:AY753325 EMBL:AK015530 EMBL:CU207316
            EMBL:BC021522 EMBL:AY490388 IPI:IPI00471097 RefSeq:NP_001157100.1
            RefSeq:NP_598449.1 UniGene:Mm.486359 STRING:Q91V16
            PhosphoSite:Q91V16 PaxDb:Q91V16 PRIDE:Q91V16
            Ensembl:ENSMUST00000039729 Ensembl:ENSMUST00000111719
            Ensembl:ENSMUST00000111721 Ensembl:ENSMUST00000111723
            Ensembl:ENSMUST00000111724 Ensembl:ENSMUST00000111725
            Ensembl:ENSMUST00000111726 GeneID:67636 KEGG:mmu:67636
            UCSC:uc009erf.2 InParanoid:B2KFC1 NextBio:325095 Bgee:Q91V16
            CleanEx:MM_LYRM5 Genevestigator:Q91V16
            GermOnline:ENSMUSG00000040370 Uniprot:Q91V16
        Length = 86

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 42/66 (63%), Positives = 54/66 (81%)

Query:   103 KVFLHLGKDYPKGFDYFRLRLKNAFMKNAQVQDPEKIDQMIKHGEFVVKEIQALYMLKKY 162
             K  L+LG+DYPKG DYF+ RLKN F+KN  V+DPEKI ++I  GEFV+KE++ALY L+KY
Sbjct:    14 KNLLYLGRDYPKGADYFKRRLKNVFLKNKDVEDPEKIKELIARGEFVMKELEALYFLRKY 73

Query:   163 RTLKQR 168
             R +KQR
Sbjct:    74 RAMKQR 79


>RGD|2320673 [details] [associations]
            symbol:Lyrm5 "LYR motif containing 5" species:10116 "Rattus
            norvegicus" [GO:0005739 "mitochondrion" evidence=IEA;ISO]
            RGD:2320673 Pfam:PF05347 GO:GO:0005739 InterPro:IPR008011
            EMBL:CH473964 GeneTree:ENSGT00390000001810 OrthoDB:EOG4W9J5K
            CTD:144363 OMA:GRGEFVM IPI:IPI00206425 RefSeq:XP_002726521.1
            RefSeq:XP_002729485.1 UniGene:Rn.23953 Ensembl:ENSRNOT00000021284
            GeneID:100361188 KEGG:rno:100361188 UCSC:RGD:2320673 Uniprot:D4AD58
        Length = 86

 Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 42/66 (63%), Positives = 54/66 (81%)

Query:   103 KVFLHLGKDYPKGFDYFRLRLKNAFMKNAQVQDPEKIDQMIKHGEFVVKEIQALYMLKKY 162
             K  L+LG+DYPKG DYF+ RLKN F+KN  V+DPEKI ++I  GEFV+KE++ALY L+KY
Sbjct:    14 KNLLYLGRDYPKGADYFKRRLKNVFLKNKDVKDPEKIKELIARGEFVMKELEALYFLRKY 73

Query:   163 RTLKQR 168
             R +KQR
Sbjct:    74 RAMKQR 79


>UNIPROTKB|Q0VCR0 [details] [associations]
            symbol:LYRM5 "LYR motif-containing protein 5" species:9913
            "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA] Pfam:PF05347
            GO:GO:0005739 InterPro:IPR008011 eggNOG:NOG76571
            GeneTree:ENSGT00390000001810 HOGENOM:HOG000192356 OrthoDB:EOG4W9J5K
            EMBL:BC120046 IPI:IPI00693195 RefSeq:NP_001108332.1
            UniGene:Bt.91693 PRIDE:Q0VCR0 Ensembl:ENSBTAT00000037914
            GeneID:783110 KEGG:bta:783110 CTD:144363 HOVERGEN:HBG081943
            InParanoid:Q0VCR0 OMA:GRGEFVM NextBio:20925878 Uniprot:Q0VCR0
        Length = 88

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 41/66 (62%), Positives = 55/66 (83%)

Query:   103 KVFLHLGKDYPKGFDYFRLRLKNAFMKNAQVQDPEKIDQMIKHGEFVVKEIQALYMLKKY 162
             K  L+LG+DYPKG DYF+ RLKN F+KN  V+DPEKI ++I+ G+FV+KE++ALY L+KY
Sbjct:    14 KNLLYLGRDYPKGADYFKRRLKNVFLKNKDVKDPEKIKELIERGKFVMKELEALYFLRKY 73

Query:   163 RTLKQR 168
             R +KQR
Sbjct:    74 RAMKQR 79


>UNIPROTKB|E1BTS3 [details] [associations]
            symbol:LYRM5 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005739 "mitochondrion" evidence=IEA] Pfam:PF05347
            GO:GO:0005739 InterPro:IPR008011 GeneTree:ENSGT00390000001810
            CTD:144363 OMA:GRGEFVM EMBL:AADN02006658 IPI:IPI00573844
            RefSeq:XP_001235312.1 UniGene:Gga.40206 Ensembl:ENSGALT00000022724
            GeneID:776112 KEGG:gga:776112 NextBio:20922737 Uniprot:E1BTS3
        Length = 86

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 42/66 (63%), Positives = 54/66 (81%)

Query:   103 KVFLHLGKDYPKGFDYFRLRLKNAFMKNAQVQDPEKIDQMIKHGEFVVKEIQALYMLKKY 162
             K  L+LG++YPKG DYFR RLK AF+KN  V+DPEKI Q+I  GEFV+KE++ALY L+KY
Sbjct:    14 KNLLYLGREYPKGADYFRSRLKAAFLKNKDVKDPEKIKQLIARGEFVIKELEALYFLRKY 73

Query:   163 RTLKQR 168
             R +K+R
Sbjct:    74 RAMKKR 79


>UNIPROTKB|F1SFJ7 [details] [associations]
            symbol:LYRM5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005739 "mitochondrion" evidence=IEA] Pfam:PF05347
            GO:GO:0005739 InterPro:IPR008011 GeneTree:ENSGT00390000001810
            OMA:GRGEFVM EMBL:FP089548 RefSeq:XP_003126473.1
            RefSeq:XP_003126474.1 Ensembl:ENSSSCT00000000603 GeneID:100517943
            KEGG:ssc:100517943 Uniprot:F1SFJ7
        Length = 90

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 41/66 (62%), Positives = 54/66 (81%)

Query:   103 KVFLHLGKDYPKGFDYFRLRLKNAFMKNAQVQDPEKIDQMIKHGEFVVKEIQALYMLKKY 162
             K  L+LG+DYPKG DYF+ RLKN F+KN  V+DPEKI ++I  G+FV+KE++ALY L+KY
Sbjct:    16 KNLLYLGRDYPKGADYFKRRLKNVFLKNKDVKDPEKIKELIARGKFVMKELEALYFLRKY 75

Query:   163 RTLKQR 168
             R +KQR
Sbjct:    76 RAMKQR 81


>UNIPROTKB|J3KPI7 [details] [associations]
            symbol:LYRM5 "LYR motif-containing protein 5" species:9606
            "Homo sapiens" [GO:0005739 "mitochondrion" evidence=IEA]
            Pfam:PF05347 InterPro:IPR008011 EMBL:CH471094 CTD:144363
            OMA:GRGEFVM EMBL:AC092794 HGNC:HGNC:27052 RefSeq:NP_001001660.2
            UniGene:Hs.209151 Ensembl:ENST00000381356 GeneID:144363
            KEGG:hsa:144363 Uniprot:J3KPI7
        Length = 90

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 41/66 (62%), Positives = 54/66 (81%)

Query:   103 KVFLHLGKDYPKGFDYFRLRLKNAFMKNAQVQDPEKIDQMIKHGEFVVKEIQALYMLKKY 162
             K  L+LG+DYPKG DYF+ RLKN F+KN  V++PEKI ++I  GEFV+KE++ALY L+KY
Sbjct:    16 KNLLYLGRDYPKGADYFKKRLKNIFLKNKDVKNPEKIKELIAQGEFVMKELEALYFLRKY 75

Query:   163 RTLKQR 168
             R +KQR
Sbjct:    76 RAMKQR 81


>ZFIN|ZDB-GENE-070424-20 [details] [associations]
            symbol:lyrm5b "LYR motif containing 5b" species:7955
            "Danio rerio" [GO:0008150 "biological_process" evidence=ND]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0003674
            "molecular_function" evidence=ND] Pfam:PF05347
            ZFIN:ZDB-GENE-070424-20 InterPro:IPR008011 Pfam:PF13232
            EMBL:BC133879 IPI:IPI00609695 RefSeq:NP_001153447.1
            UniGene:Dr.120746 Ensembl:ENSDART00000067357
            Ensembl:ENSDART00000133859 GeneID:561760 KEGG:dre:561760 CTD:561760
            eggNOG:NOG76571 GeneTree:ENSGT00390000001810 HOGENOM:HOG000192356
            InParanoid:A3KNJ8 OMA:IFIGREY OrthoDB:EOG4W9J5K NextBio:20884080
            Bgee:A3KNJ8 Uniprot:A3KNJ8
        Length = 84

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 41/66 (62%), Positives = 52/66 (78%)

Query:   103 KVFLHLGKDYPKGFDYFRLRLKNAFMKNAQVQDPEKIDQMIKHGEFVVKEIQALYMLKKY 162
             K  L LG++YPKG DYFR RL+ AF KN  ++DP+KI Q+I  GEFVVKE++ALY L+KY
Sbjct:    14 KALLFLGREYPKGADYFRERLRAAFAKNKDMRDPDKIKQLISRGEFVVKELEALYYLRKY 73

Query:   163 RTLKQR 168
             R LK+R
Sbjct:    74 RALKKR 79


>DICTYBASE|DDB_G0284341 [details] [associations]
            symbol:lyrm5 "LYR motif-containing protein 5"
            species:44689 "Dictyostelium discoideum" [GO:0008150
            "biological_process" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
            dictyBase:DDB_G0284341 GenomeReviews:CM000153_GR EMBL:AAFI02000064
            eggNOG:NOG76571 RefSeq:XP_638568.1 EnsemblProtists:DDB0267014
            GeneID:8624540 KEGG:ddi:DDB_G0284341 OMA:MNRFHKY Uniprot:Q54PT6
        Length = 157

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 25/65 (38%), Positives = 40/65 (61%)

Query:   103 KVFLHLGKDYPKGFDYFRLRLKNAFMKNAQVQDPEKIDQMIKHGEFVVKEIQALYMLKKY 162
             K  ++LG+    G DY R + K  F+ NA + D  KI++ I+  ++V+KEI+A+    KY
Sbjct:    69 KQLMYLGRVGFLGVDYIRDKAKPQFISNANLTDNNKINECIERTKYVIKEIEAMNRFHKY 128

Query:   163 RTLKQ 167
             R LK+
Sbjct:   129 RNLKK 133


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.137   0.416    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      175       175   0.00078  109 3  11 22  0.48    31
                                                     31  0.49    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  594 (63 KB)
  Total size of DFA:  160 KB (2095 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.14u 0.08s 17.22t   Elapsed:  00:00:02
  Total cpu time:  17.14u 0.08s 17.22t   Elapsed:  00:00:02
  Start:  Thu Aug 15 14:04:02 2013   End:  Thu Aug 15 14:04:04 2013

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