Your job contains 1 sequence.
>psy15835
MYQEFLPDPELKFRNQVREKLERSDMIKRRSVIDIPSFFVGSILSVTSADKHDPNKTRKF
VGICIQKRYCGLRHEFVLRNVVDNLGAVPCTGDRHGPYLSLLGALGLDPKIVLENV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15835
(116 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0037608 - symbol:mRpL19 "mitochondrial ribosomal p... 288 2.2e-25 1
WB|WBGene00022470 - symbol:mrpl-19 species:6239 "Caenorha... 248 3.9e-21 1
UNIPROTKB|F1NEW6 - symbol:MRPL19 "Uncharacterized protein... 206 1.1e-16 1
ZFIN|ZDB-GENE-040801-55 - symbol:mrpl19 "mitochondrial ri... 198 7.7e-16 1
UNIPROTKB|I3LNJ0 - symbol:MRPL19 "Uncharacterized protein... 196 1.3e-15 1
UNIPROTKB|F1MMM8 - symbol:MRPL19 "39S ribosomal protein L... 195 1.6e-15 1
UNIPROTKB|Q2HJI0 - symbol:MRPL19 "39S ribosomal protein L... 195 1.6e-15 1
UNIPROTKB|E2R077 - symbol:MRPL19 "Uncharacterized protein... 193 2.6e-15 1
MGI|MGI:1926274 - symbol:Mrpl19 "mitochondrial ribosomal ... 192 3.3e-15 1
RGD|1587381 - symbol:Mrpl19 "mitochondrial ribosomal prot... 188 9.8e-15 1
UNIPROTKB|P49406 - symbol:MRPL19 "39S ribosomal protein L... 186 1.7e-14 1
>FB|FBgn0037608 [details] [associations]
symbol:mRpL19 "mitochondrial ribosomal protein L19"
species:7227 "Drosophila melanogaster" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] InterPro:IPR001857 Pfam:PF01245 PROSITE:PS01015
EMBL:AE014297 GO:GO:0006412 GO:GO:0005762 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR15680 CTD:9801
eggNOG:NOG247570 GeneTree:ENSGT00390000009415 OMA:DLYNPTI
EMBL:AY061413 RefSeq:NP_524284.1 UniGene:Dm.2462
ProteinModelPortal:Q9VHN6 SMR:Q9VHN6 DIP:DIP-23691N
MINT:MINT-996971 STRING:Q9VHN6 PaxDb:Q9VHN6 PRIDE:Q9VHN6
EnsemblMetazoa:FBtr0081901 GeneID:41028 KEGG:dme:Dmel_CG8039
FlyBase:FBgn0037608 InParanoid:Q9VHN6 OrthoDB:EOG4XKSQ1
PhylomeDB:Q9VHN6 GenomeRNAi:41028 NextBio:821796 Bgee:Q9VHN6
GermOnline:CG8039 Uniprot:Q9VHN6
Length = 306
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 55/111 (49%), Positives = 79/111 (71%)
Query: 1 MYQEFLPDPELKFRNQVREKLERSDMIKRRSVIDIPSFFVGSILSVTSADKHDPNKTRKF 60
+Y EFLPDP++++RN VREKLER DM+ RR ID+P F+VGS+L+VTS+D H KT +F
Sbjct: 65 VYPEFLPDPKVEWRNLVREKLERLDMLDRRKQIDLPEFYVGSVLAVTSSDPHAAGKTSRF 124
Query: 61 VGICIQKRYCGLRHEFVLRNVVDNLGAVPCTGDRHGPYLSLLGALGLDPKI 111
VGICI + CGLR F+LRNV+D+ G + + + P + + L L+ ++
Sbjct: 125 VGICINRDRCGLRARFILRNVIDHQG-MEVVYELYDPTILKIEVLRLEKRL 174
>WB|WBGene00022470 [details] [associations]
symbol:mrpl-19 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR001857 Pfam:PF01245 PROSITE:PS01015 GO:GO:0005739
GO:GO:0009792 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR15680
HOGENOM:HOG000020439 EMBL:FO080992 RefSeq:NP_491381.1
ProteinModelPortal:Q95Y83 SMR:Q95Y83 STRING:Q95Y83 PaxDb:Q95Y83
EnsemblMetazoa:Y119C1B.4 GeneID:172052 KEGG:cel:CELE_Y119C1B.4
UCSC:Y119C1B.4 CTD:172052 WormBase:Y119C1B.4 eggNOG:NOG247570
GeneTree:ENSGT00390000009415 InParanoid:Q95Y83 OMA:DLYNPTI
NextBio:873823 Uniprot:Q95Y83
Length = 288
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 49/111 (44%), Positives = 75/111 (67%)
Query: 1 MYQEFLPDPELKFRNQVREKLERSDMIKRRSVIDIPSFFVGSILSVTSADKHDPNKTRKF 60
+Y +FL P RN ++E+LER DM++RR IDIP F+VGSI++VTS+DK+ +K +F
Sbjct: 48 IYPDFLQSPVWNRRNALKEELERQDMLERRMNIDIPEFYVGSIVAVTSSDKNLGSKEHRF 107
Query: 61 VGICIQKRYCGLRHEFVLRNVVDNLGAVPCTGDRHGPYLSLLGALGLDPKI 111
VGICI++ GL H+F LRN ++N+G V D + P + + L L+ ++
Sbjct: 108 VGICIRREKEGLLHQFTLRNTIENIG-VEVVYDLYNPTIKKIETLKLEKRL 157
>UNIPROTKB|F1NEW6 [details] [associations]
symbol:MRPL19 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061 GO:GO:0005739
GO:GO:0006412 GO:GO:0031965 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR15680
GeneTree:ENSGT00390000009415 OMA:KRWERPN EMBL:AADN02018161
IPI:IPI00592787 Ensembl:ENSGALT00000026999 Uniprot:F1NEW6
Length = 253
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 46/108 (42%), Positives = 70/108 (64%)
Query: 4 EFLPDPELKFRNQVREKLERSDMIKRRSVIDIPSFFVGSILSVTSADKHDPNKTRKFVGI 63
EF+P P + + ++ +ER DMI+RR V +IP F+VGSIL+VT+AD + KT +FVGI
Sbjct: 42 EFIP-PRGR-TDPLKFYMERKDMIQRRKVFNIPEFYVGSILAVTTADPYADGKTNRFVGI 99
Query: 64 CIQKRYCGLRHEFVLRNVVDNLGAVPCTGDRHGPYLSLLGALGLDPKI 111
CIQ+ GL FVLRNV+++ G C + + P + + L L+ ++
Sbjct: 100 CIQRGGRGLGATFVLRNVIEDQGVEICY-ELYSPRIQEITVLKLEKRL 146
>ZFIN|ZDB-GENE-040801-55 [details] [associations]
symbol:mrpl19 "mitochondrial ribosomal protein L19"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061
ZFIN:ZDB-GENE-040801-55 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 EMBL:BX322665 PANTHER:PTHR15680
GeneTree:ENSGT00390000009415 IPI:IPI00490324
Ensembl:ENSDART00000124388 ArrayExpress:F1R7V6 Bgee:F1R7V6
Uniprot:F1R7V6
Length = 291
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 43/108 (39%), Positives = 65/108 (60%)
Query: 4 EFLPDPELKFRNQVREKLERSDMIKRRSVIDIPSFFVGSILSVTSADKHDPNKTRKFVGI 63
EF+P P + +Q++ +ER DMI+RR V+ IP F+VGSIL+VT D + +FVGI
Sbjct: 78 EFIP-PRQR-TDQIKFYIERKDMIQRRKVLQIPEFYVGSILAVTMTDPYASGNLNRFVGI 135
Query: 64 CIQKRYCGLRHEFVLRNVVDNLGAVPCTGDRHGPYLSLLGALGLDPKI 111
C Q+ GL F+LRNV+D G C + + P + + L L+ ++
Sbjct: 136 CTQRSGKGLGATFILRNVIDGQGVEICY-ELYSPRMRKIEVLKLEKRL 182
>UNIPROTKB|I3LNJ0 [details] [associations]
symbol:MRPL19 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061 GO:GO:0005739
GO:GO:0006412 GO:GO:0031965 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR15680
GeneTree:ENSGT00390000009415 OMA:KRWERPN EMBL:FP326655
RefSeq:XP_003354803.1 Ensembl:ENSSSCT00000023158 GeneID:100625069
KEGG:ssc:100625069 Uniprot:I3LNJ0
Length = 292
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 41/108 (37%), Positives = 68/108 (62%)
Query: 4 EFLPDPELKFRNQVREKLERSDMIKRRSVIDIPSFFVGSILSVTSADKHDPNKTRKFVGI 63
EF+P P + N ++ ++ER DM++RR ++ IP F+VGSIL VT+AD + KT +F+GI
Sbjct: 79 EFIP-PRGR-TNPLKFQIERKDMLERRKILHIPEFYVGSILRVTTADPYASAKTSQFLGI 136
Query: 64 CIQKRYCGLRHEFVLRNVVDNLGAVPCTGDRHGPYLSLLGALGLDPKI 111
CIQ+ GL F+LRN ++ G C + + P + + + L+ ++
Sbjct: 137 CIQRSGSGLGATFILRNTIEGQGVEICF-ELYNPRIQEIQVVKLEKRL 183
>UNIPROTKB|F1MMM8 [details] [associations]
symbol:MRPL19 "39S ribosomal protein L19, mitochondrial"
species:9913 "Bos taurus" [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061 GO:GO:0005739
GO:GO:0006412 GO:GO:0031965 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR15680
IPI:IPI00715557 UniGene:Bt.55433 GeneTree:ENSGT00390000009415
OMA:KRWERPN EMBL:DAAA02031026 Ensembl:ENSBTAT00000003312
Uniprot:F1MMM8
Length = 292
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 41/108 (37%), Positives = 68/108 (62%)
Query: 4 EFLPDPELKFRNQVREKLERSDMIKRRSVIDIPSFFVGSILSVTSADKHDPNKTRKFVGI 63
EF+P P + N ++ ++ER DM++RR ++ IP F+VGSIL VT+AD + KT +F+GI
Sbjct: 79 EFIP-PRGR-TNPLKFQIERKDMLERRKILHIPEFYVGSILRVTTADPYANGKTSQFLGI 136
Query: 64 CIQKRYCGLRHEFVLRNVVDNLGAVPCTGDRHGPYLSLLGALGLDPKI 111
CIQ+ GL F+LRN ++ G C + + P + + + L+ ++
Sbjct: 137 CIQRSGKGLGATFILRNTIEGQGVEICF-ELYNPRIQEIQVVKLEKRL 183
>UNIPROTKB|Q2HJI0 [details] [associations]
symbol:MRPL19 "39S ribosomal protein L19, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061
PROSITE:PS01015 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335
PANTHER:PTHR15680 PDB:2FTC PDBsum:2FTC EMBL:BC105368
IPI:IPI00715557 RefSeq:NP_001039533.1 UniGene:Bt.55433
ProteinModelPortal:Q2HJI0 STRING:Q2HJI0 PRIDE:Q2HJI0 GeneID:510957
KEGG:bta:510957 CTD:9801 HOGENOM:HOG000020439 HOVERGEN:HBG023932
InParanoid:Q2HJI0 OrthoDB:EOG4G4GR6 EvolutionaryTrace:Q2HJI0
NextBio:20869701 Uniprot:Q2HJI0
Length = 292
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 41/108 (37%), Positives = 68/108 (62%)
Query: 4 EFLPDPELKFRNQVREKLERSDMIKRRSVIDIPSFFVGSILSVTSADKHDPNKTRKFVGI 63
EF+P P + N ++ ++ER DM++RR ++ IP F+VGSIL VT+AD + KT +F+GI
Sbjct: 79 EFIP-PRGR-TNPLKFQIERKDMLERRKILHIPEFYVGSILRVTTADPYANGKTSQFLGI 136
Query: 64 CIQKRYCGLRHEFVLRNVVDNLGAVPCTGDRHGPYLSLLGALGLDPKI 111
CIQ+ GL F+LRN ++ G C + + P + + + L+ ++
Sbjct: 137 CIQRSGKGLGATFILRNTIEGQGVEICF-ELYNPRIQEIQVVKLEKRL 183
>UNIPROTKB|E2R077 [details] [associations]
symbol:MRPL19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001857
Pfam:PF01245 PRINTS:PR00061 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR15680
CTD:9801 GeneTree:ENSGT00390000009415 OMA:KRWERPN EMBL:AAEX03010959
RefSeq:XP_532990.2 Ensembl:ENSCAFT00000013000 GeneID:475780
KEGG:cfa:475780 Uniprot:E2R077
Length = 292
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 40/108 (37%), Positives = 67/108 (62%)
Query: 4 EFLPDPELKFRNQVREKLERSDMIKRRSVIDIPSFFVGSILSVTSADKHDPNKTRKFVGI 63
EF+P P + N ++ ++ER DM++RR ++ IP F+VGSIL VT+AD + K +F+GI
Sbjct: 79 EFIP-PRGR-TNPLKFQIERKDMLERRKILHIPEFYVGSILRVTTADLYANGKASQFLGI 136
Query: 64 CIQKRYCGLRHEFVLRNVVDNLGAVPCTGDRHGPYLSLLGALGLDPKI 111
CIQ+ GL F+LRN ++ G C + + P + + + L+ ++
Sbjct: 137 CIQRSGAGLGATFILRNTIEGQGVEICF-ELYNPRIQEIQVIKLEKRL 183
>MGI|MGI:1926274 [details] [associations]
symbol:Mrpl19 "mitochondrial ribosomal protein L19"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005761 "mitochondrial ribosome" evidence=ISS]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=ISO] InterPro:IPR001857
Pfam:PF01245 PRINTS:PR00061 PROSITE:PS01015 MGI:MGI:1926274
GO:GO:0006412 GO:GO:0031965 GO:GO:0003735 GO:GO:0005761
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
CTD:9801 HOVERGEN:HBG023932 OrthoDB:EOG4G4GR6
GeneTree:ENSGT00390000009415 OMA:KRWERPN EMBL:AK018508
EMBL:AK050637 EMBL:BC020315 EMBL:BC043921 IPI:IPI00989172
RefSeq:NP_080766.1 UniGene:Mm.276293 ProteinModelPortal:Q9D338
SMR:Q9D338 STRING:Q9D338 PhosphoSite:Q9D338 PaxDb:Q9D338
PRIDE:Q9D338 Ensembl:ENSMUST00000032124 GeneID:56284 KEGG:mmu:56284
UCSC:uc009clf.1 InParanoid:Q9D338 NextBio:312188 Bgee:Q9D338
CleanEx:MM_MRPL19 Genevestigator:Q9D338
GermOnline:ENSMUSG00000030045 Uniprot:Q9D338
Length = 292
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 42/108 (38%), Positives = 66/108 (61%)
Query: 4 EFLPDPELKFRNQVREKLERSDMIKRRSVIDIPSFFVGSILSVTSADKHDPNKTRKFVGI 63
EF+P P + N ++ K+ER DM+ RR V+ IP F+VGSIL VT+AD + KT +F+GI
Sbjct: 79 EFIP-PRGR-TNPLKFKIERKDMLDRRKVLPIPEFYVGSILRVTTADPYASGKTSQFLGI 136
Query: 64 CIQKRYCGLRHEFVLRNVVDNLGAVPCTGDRHGPYLSLLGALGLDPKI 111
CI++ GL F LRN ++ G C + + P + + + L+ ++
Sbjct: 137 CIKRSGNGLGATFTLRNTIEGQGVEICF-ELYNPRIQEIQVVKLEKRL 183
>RGD|1587381 [details] [associations]
symbol:Mrpl19 "mitochondrial ribosomal protein L19"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA;ISO]
InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061 RGD:1587381
GO:GO:0005739 GO:GO:0006412 GO:GO:0031965 GO:GO:0005840
GO:GO:0003735 EMBL:CH473957 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR15680 CTD:9801 OrthoDB:EOG4G4GR6
GeneTree:ENSGT00390000009415 IPI:IPI00190232 RefSeq:NP_001025069.1
UniGene:Rn.3438 Ensembl:ENSRNOT00000009308 GeneID:297372
KEGG:rno:297372 UCSC:RGD:1587381 Uniprot:D4A4A9
Length = 292
Score = 188 (71.2 bits), Expect = 9.8e-15, P = 9.8e-15
Identities = 41/108 (37%), Positives = 66/108 (61%)
Query: 4 EFLPDPELKFRNQVREKLERSDMIKRRSVIDIPSFFVGSILSVTSADKHDPNKTRKFVGI 63
EF+P P + N ++ ++ER DM+ RR V+ IP F+VGSIL VT+AD + KT +F+GI
Sbjct: 79 EFIP-PRGR-TNPLKFQIERRDMLDRRKVLPIPEFYVGSILRVTTADPYASGKTSQFLGI 136
Query: 64 CIQKRYCGLRHEFVLRNVVDNLGAVPCTGDRHGPYLSLLGALGLDPKI 111
CI++ GL F LRN ++ G C + + P + + + L+ ++
Sbjct: 137 CIKRSGSGLGATFTLRNTIEGQGVEICF-ELYNPRIHEIQVVKLEKRL 183
>UNIPROTKB|P49406 [details] [associations]
symbol:MRPL19 "39S ribosomal protein L19, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IDA] InterPro:IPR001857 Pfam:PF01245
PRINTS:PR00061 PROSITE:PS01015 EMBL:AC005034 GO:GO:0005739
GO:GO:0006412 GO:GO:0031965 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
CleanEx:HS_MRPL15 CTD:9801 HOGENOM:HOG000020439 HOVERGEN:HBG023932
OrthoDB:EOG4G4GR6 EMBL:BC030144 EMBL:D14660 EMBL:AB051621
IPI:IPI00027096 RefSeq:NP_055578.2 UniGene:Hs.44024
ProteinModelPortal:P49406 SMR:P49406 IntAct:P49406
MINT:MINT-6492165 STRING:P49406 PhosphoSite:P49406 DMDM:92090636
PaxDb:P49406 PRIDE:P49406 DNASU:9801 Ensembl:ENST00000393909
Ensembl:ENST00000409374 GeneID:9801 KEGG:hsa:9801 UCSC:uc002snl.3
GeneCards:GC02P075873 HGNC:HGNC:14052 MIM:611832 neXtProt:NX_P49406
PharmGKB:PA30948 InParanoid:P49406 OMA:KRWERPN ChiTaRS:MRPL19
GenomeRNAi:9801 NextBio:36904 ArrayExpress:P49406 Bgee:P49406
CleanEx:HS_MRPL19 Genevestigator:P49406 Uniprot:P49406
Length = 292
Score = 186 (70.5 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 45/113 (39%), Positives = 68/113 (60%)
Query: 4 EFLP-----DPELKFRNQVREKLERSDMIKRRSVIDIPSFFVGSILSVTSADKHDPNKTR 58
EF+P DP LKF+ +ER DM++RR V+ IP F+VGSIL VT+AD + K
Sbjct: 79 EFIPRRGRTDP-LKFQ------IERKDMLERRKVLHIPEFYVGSILRVTTADPYASGKIS 131
Query: 59 KFVGICIQKRYCGLRHEFVLRNVVDNLGAVPCTGDRHGPYLSLLGALGLDPKI 111
+F+GICIQ+ GL F+LRNV++ G C + + P + + + L+ ++
Sbjct: 132 QFLGICIQRSGRGLGATFILRNVIEGQGVEICF-ELYNPRVQEIQVVKLEKRL 183
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.143 0.430 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 116 116 0.00091 102 3 11 22 0.45 30
29 0.45 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 519 (55 KB)
Total size of DFA: 112 KB (2076 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.93u 0.21s 12.14t Elapsed: 00:00:00
Total cpu time: 11.93u 0.21s 12.14t Elapsed: 00:00:00
Start: Thu Aug 15 14:10:17 2013 End: Thu Aug 15 14:10:17 2013